RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GASK1A (Homo sapiens)

Ensembl gene IDs: ENSG00000144649

Ensembl transcript IDs: ENST00000273146.6, ENST00000430121.3, ENST00000434206.1, ENST00000488863.5, ENST00000492161.1

Found 436 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCTTTATTAGGTTGGTCTCAGGTATTGCATGCAGGCGGGCACACATaGCACCCACACCTACACACCTCTACACACACACAAAGTTCTCCC +
Preference number: 1 (lower is better)
Translates to: PLLGWSQVLHAGGHT*HPHLHTSTHTQSSP
Trigger: GGGAGAACTTTGTGTGTGTGTAGAGGTGTGTAGGTGTGGGTGGCATGTGTGCCCGCCTGCATGCAATACCTGAGACCAACCTAATAAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430121.3
3UTR GCA 90 bp ACCCACACCTACACACCTCTACACACACACAAAGTTCTCCCACTCTaGATATGCACGTGCATCACACATTTTTACAGTTTCTTGAGCAGC +
Preference number: 1 (lower is better)
Translates to: THTYTPLHTHKVLPL*ICTCITHFYSFLSS
Trigger: GCTGCTCAAGAAACTGTAAAAATGTGTGATGCACGTGCATATGCAGAGTGGGAGAACTTTGTGTGTGTGTAGAGGTGTGTAGGTGTGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430121.3
3UTR TCA 90 bp ACACCACCATTTCAGAGAGCAATTTGGCAGTTTCTCTCAGAATACTaGATGCCCATACCCTTTGCCCCAGAAATCCCGTACGGAAATCTA +
Preference number: 1 (lower is better)
Translates to: TPPFQRAIWQFLSEY*MPIPFAPEIPYGNL
Trigger: TAGATTTCCGTACGGGATTTCTGGGGCAAAGGGTATGGGCATTCAGTATTCTGAGAGAAACTGCCAAATTGCTCTCTGAAATGGTGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430121.3
3UTR GCA 90 bp AGTTTCTTGAGCAGCTCACAGAACATTTTCGAATGTATTTGTTGGTaGAAGGGAATAAATAGCCAGAGCCGAGAAGGCAGAAAGGGACGC +
Preference number: 1 (lower is better)
Translates to: SFLSSSQNIFECICW*KGINSQSREGRKGR
Trigger: GCGTCCCTTTCTGCCTTCTCGGCTCTGGCTATTTATTCCCTTGCACCAACAAATACATTCGAAAATGTTCTGTGAGCTGCTCAAGAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430121.3
3UTR GCA 90 bp TTAAGCCTGAGTCTACTTTCAGCCAGAGCAACTCCAGGCTGCAAGTaGAGTTCTATGAAGATTGTACCTTTATTAGGTTGGTCTCAGGTA +
Preference number: 1 (lower is better)
Translates to: LSLSLLSARATPGCK*SSMKIVPLLGWSQV
Trigger: TACCTGAGACCAACCTAATAAAGGTACAATCTTCATAGAACTGCACTTGCAGCCTGGAGTTGCTCTGGCTGAAAGTAGACTCAGGCTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430121.3
3UTR TCA 90 bp TATGTAGTTTGGGCATTGTCCACTTGCATGTCAGTCTCTCGGTGGTaGGACAGGATTAGATCTGTTTTATTTCAAAGCGGCTGGTTAAGT +
Preference number: 1 (lower is better)
Translates to: YVVWALSTCMSVSRW*DRIRSVLFQSGWLS
Trigger: ACTTAACCAGCCGCTTTGAAATAAAACAGATCTAATCCTGTCTCACCACCGAGAGACTGACATGCAAGTGGACAATGCCCAAACTACATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273146.6
3UTR GCA 90 bp CATTTCTTAAGCCTGAGTCTACTTTCAGCCAGAGCAACTCCAGGCTaGAAGTGCAGTTCTATGAAGATTGTACCTTTATTAGGTTGGTCT +
Preference number: 1 (lower is better)
Translates to: HFLSLSLLSARATPG*KCSSMKIVPLLGWS
Trigger: AGACCAACCTAATAAAGGTACAATCTTCATAGAACTGCACTTGCAGCCTGGAGTTGCTCTGGCTGAAAGTAGACTCAGGCTTAAGAAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430121.3
3UTR CCA 90 bp TACAGTTTCTTGAGCAGCTCACAGAACATTTTCGAATGTATTTGTTaGTGCAAGGGAATAAATAGCCAGAGCCGAGAAGGCAGAAAGGGA +
Preference number: 1 (lower is better)
Translates to: YSFLSSSQNIFECIC*CKGINSQSREGRKG
Trigger: TCCCTTTCTGCCTTCTCGGCTCTGGCTATTTATTCCCTTGCACCAACAAATACATTCGAAAATGTTCTGTGAGCTGCTCAAGAAACTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430121.3
3UTR-3UTR GCA 90 bp TTTCTTAAGCCTGAGTCTACTTTCAGCCAGAGCAACTCCAGGCTGCAAGTGCAGGTCTCAGGTATTGCATaGAGGCGGGCACACATGCCA +
Preference number: 2 (lower is better)
Translates to: FLKPESTFSQSNSRLQVQVSGIA*RRAHMP
Trigger: TGGCATGTGTGCCCGCCTGCATGCAATACCTGAGAC...CTGCACTTGCAGCCTGGAGTTGCTCTGGCTGAAAGTAGACTCAGGCTTAAGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430121.3
3UTR-3UTR CCA 90 bp CCTCTGGCTGAGTGTAGGTCTACCAGGCAGAAGGCAAAGCAGAGACTGTTAAACGAGCCCAAGAAAATGTaGCCATCAGGATGGATGCTC +
Preference number: 2 (lower is better)
Translates to: PLAECRSTRQKAKQRLLNEPKKM*PSGWML
Trigger: GAGCATCCATCCTGATGGCCACATTTTCTTGGGCTC...GTTTAACAGTCTCTGCTTTGCCTTCTGCCTGGTAGACCTACACTCAGCCAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273146.6
3UTR CAA 90 bp TCCAGGCTGCAAGTGCAGTTCTATGAAGATTGTACCTTTATTAGGTaGGTCTCAGGTATTGCATGCAGGCGGGCACACATGCCACCCACA +
Preference number: 2 (lower is better)
Translates to: SRLQVQFYEDCTFIR*VSGIACRRAHMPPT
Trigger: TGTGGGTGGCATGTGTGCCCGCCTGCATGCAATACCTGAGACCAACCTAATAAAGGTACAATCTTCATAGAACTGCACTTGCAGCCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430121.3
3UTR-3UTR CCA 90 bp CTGAGTCTACTTTCAGCCAGAGCAACTCCAGGCTGCAAGTGCAGTTCTATGAAGATGTGGCCATCAGGATaGATGCTCATTGACTCAGGG +
Preference number: 2 (lower is better)
Translates to: LSLLSARATPGCKCSSMKMWPSG*MLIDSG
Trigger: CCCTGAGTCAATGAGCATCCATCCTGATGGCCACAT...CTTCATAGAACTGCACTTGCAGCCTGGAGTTGCTCTGGCTGAAAGTAGACTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430121.3
3UTR-3UTR GCA 90 bp CATTGTCCACTTGCATGTCAGTCTCTCGGTGGTGAGACAGGATTAGATCTGTTTGGCCATCAGGATGGATaGTCATTGACTCAGGGCTGT +
Preference number: 2 (lower is better)
Translates to: HCPLACQSLGGETGLDLFGHQDG*SLTQGC
Trigger: ACAGCCCTGAGTCAATGAGCATCCATCCTGATGGCC...AAACAGATCTAATCCTGTCTCACCACCGAGAGACTGACATGCAAGTGGACAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273146.6
3UTR-3UTR CCA 90 bp ATTGTACCTTTATTAGGTTGGTCTCAGGTATTGCATGCAGGCGGGCACACATGCGAGCCCAAGAAAATGTaGCCATCAGGATGGATGCTC +
Preference number: 2 (lower is better)
Translates to: IVPLLGWSQVLHAGGHTCEPKKM*PSGWML
Trigger: GAGCATCCATCCTGATGGCCACATTTTCTTGGGCTC...GCATGTGTGCCCGCCTGCATGCAATACCTGAGACCAACCTAATAAAGGTACAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430121.3
3UTR-3UTR TCA 90 bp TTTCTTAAGCCTGAGTCTACTTTCAGCCAGAGCAACTCCAGGCTGCAAGTGCAGCATTTGTCCTCAAGATaGGTGAGCCCAAGAAAATGT +
Preference number: 2 (lower is better)
Translates to: FLKPESTFSQSNSRLQVQHLSSR*VSPRKC
Trigger: ACATTTTCTTGGGCTCACTCATCTTGAGGACAAATG...CTGCACTTGCAGCCTGGAGTTGCTCTGGCTGAAAGTAGACTCAGGCTTAAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430121.3
3UTR-3UTR GCA 90 bp TGGGAGAAATGTAAATTGACACCACCATTTCAGAGAGCAATTTGGCAGTTTCTCGGCCATCAGGATGGATaGTCATTGACTCAGGGCTGT +
Preference number: 2 (lower is better)
Translates to: WEKCKLTPPFQRAIWQFLGHQDG*SLTQGC
Trigger: ACAGCCCTGAGTCAATGAGCATCCATCCTGATGGCC...GAGAAACTGCCAAATTGCTCTCTGAAATGGTGGTGTCAATTTACATTTCTCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430121.3
3UTR-3UTR GCA 90 bp TCAGCCAGAGCAACTCCAGGCTGCAAGTGCAGTTCTATGAAGATTGTACCTTTAAAAGTTCTCCCACTCTaGATATGCACGTGCATCACA +
Preference number: 2 (lower is better)
Translates to: SARATPGCKCSSMKIVPLKVLPL*ICTCIT
Trigger: TGTGATGCACGTGCATATGCAGAGTGGGAGAACTTT...TAAAGGTACAATCTTCATAGAACTGCACTTGCAGCCTGGAGTTGCTCTGGCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430121.3
3UTR-3UTR GCA 90 bp CACCTCTACACACACACAAAGTTCTCCCACTCTGCATATGCACGTGCATCACACGAATGTATTTGTTGGTaGAAGGGAATAAATAGCCAG +
Preference number: 2 (lower is better)
Translates to: HLYTHTKFSHSAYARASHECICW*KGINSQ
Trigger: CTGGCTATTTATTCCCTTGCACCAACAAATACATTC...GTGTGATGCACGTGCATATGCAGAGTGGGAGAACTTTGTGTGTGTGTAGAGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430121.3
3UTR-3UTR CCA 90 bp TCTGAGCTGGTTGCTACAGAGGTGGTGGATAGAGTTTTATTATTATATGTAGTTTCTCACTCCCACCTCTaGCTGAGTGTAGGTCTACCA +
Preference number: 2 (lower is better)
Translates to: SELVATEVVDRVLLLYVVSHSHL*LSVGLP
Trigger: TGGTAGACCTACACTCAGCCAGAGGTGGGAGTGAGA...AACTACATATAATAATAAAACTCTATCCACCACCTCTGTAGCAACCAGCTCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273146.6
3UTR-3UTR TCA 90 bp TCTGAGCTGGTTGCTACAGAGGTGGTGGATAGAGTTTTATTATTATATGTAGTTTGCCATTTTCTAGGATaGCAAGTGTCTCACTCCCAC +
Preference number: 2 (lower is better)
Translates to: SELVATEVVDRVLLLYVVCHFLG*QVSHSH
Trigger: GTGGGAGTGAGACACTTGTCATCCTAGAAAATGGCA...AACTACATATAATAATAAAACTCTATCCACCACCTCTGTAGCAACCAGCTCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273146.6
3UTR-3UTR CCA 90 bp ACACACACACACATACACACCGCTAGGGAGTTTGTGGGACTTATGCTTTTTGTCTTCGAATGTATTTGTTaGTGCAAGGGAATAAATAGC +
Preference number: 2 (lower is better)
Translates to: THTHIHTAREFVGLMLFVFECIC*CKGINS
Trigger: GCTATTTATTCCCTTGCACCAACAAATACATTCGAA...GACAAAAAGCATAAGTCCCACAAACTCCCTAGCGGTGTGTATGTGTGTGTGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430121.3
3UTR-3UTR TCA 90 bp GTGGATAGAGTTTTATTATTATATGTAGTTTGGGCATTGTCCACTTGCATGTCACATTTGTCCTCAAGATaGGTGAGCCCAAGAAAATGT +
Preference number: 2 (lower is better)
Translates to: VDRVLLLYVVWALSTCMSHLSSR*VSPRKC
Trigger: ACATTTTCTTGGGCTCACTCATCTTGAGGACAAATG...TGACATGCAAGTGGACAATGCCCAAACTACATATAATAATAAAACTCTATCCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273146.6
3UTR-3UTR CAA 90 bp TCTCACTCCCACCTCTGGCTGAGTGTAGGTCTACCAGGCAGAAGGCAAAGCAGACAGGATGGATGCTCATaGACTCAGGGCTGTGTGCGG +
Preference number: 3 (lower is better)
Translates to: SHSHLWLSVGLPGRRQSRQDGCS*TQGCVR
Trigger: CCGCACACAGCCCTGAGTCAATGAGCATCCATCCTG...TCTGCTTTGCCTTCTGCCTGGTAGACCTACACTCAGCCAGAGGTGGGAGTGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273146.6
3UTR GCA 72 bp GGTTGGTCTCAGGTATTGCATGCAGGCGGGCACACATaGCACCCACACCTACACACCTCTACACACACACAA +
Preference number: 3 (lower is better)
Translates to: GWSQVLHAGGHT*HPHLHTSTHTQ
Trigger: TTGTGTGTGTGTAGAGGTGTGTAGGTGTGGGTGGCATGTGTGCCCGCCTGCATGCAATACCTGAGACCAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430121.3
3UTR-3UTR CAA 90 bp CTCAGGTATTGCATGCAGGCGGGCACACATGCCACCCACACCTACACACCTCTAGCAGAAAGGGACGCTTaGAGATTGAAAACCCCATAC +
Preference number: 3 (lower is better)
Translates to: LRYCMQAGTHATHTYTPLAERDA*RLKTPY
Trigger: GTATGGGGTTTTCAATCTCAAAGCGTCCCTTTCTGC...TAGAGGTGTGTAGGTGTGGGTGGCATGTGTGCCCGCCTGCATGCAATACCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430121.3
3UTR-3UTR CAA 90 bp ATGAAGATTGTACCTTTATTAGGTTGGTCTCAGGTATTGCATGCAGGCGGGCACCAGGATGGATGCTCATaGACTCAGGGCTGTGTGCGG +
Preference number: 3 (lower is better)
Translates to: MKIVPLLGWSQVLHAGGHQDGCS*TQGCVR
Trigger: CCGCACACAGCCCTGAGTCAATGAGCATCCATCCTG...GTGCCCGCCTGCATGCAATACCTGAGACCAACCTAATAAAGGTACAATCTTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430121.3
3UTR-3UTR CAA 90 bp TTGCCATTTTCTAGGATGACAAGTGTCTCACTCCCACCTCTGGCTGAGTGTAGGGAGGAACAGCATCACTaGATAAGGGTATCCTTGGAA +
Preference number: 3 (lower is better)
Translates to: LPFSRMTSVSLPPLAECREEQHH*IRVSLE
Trigger: TTCCAAGGATACCCTTATCAAGTGATGCTGTTCCTC...CCTACACTCAGCCAGAGGTGGGAGTGAGACACTTGTCATCCTAGAAAATGGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273146.6
3UTR TCA 72 bp TGGGCATTGTCCACTTGCATGTCAGTCTCTCGGTGGTaGGACAGGATTAGATCTGTTTTATTTCAAAGCGGC +
Preference number: 3 (lower is better)
Translates to: WALSTCMSVSRW*DRIRSVLFQSG
Trigger: GCCGCTTTGAAATAAAACAGATCTAATCCTGTCTCACCACCGAGAGACTGACATGCAAGTGGACAATGCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273146.6
3UTR GCA 72 bp AGAGAGCAATTTGGCAGTTTCTCTCAGAATACTGAATaGCCATACCCTTTGCCCCAGAAATCCCGTACGGAA +
Preference number: 3 (lower is better)
Translates to: REQFGSFSQNTE*PYPLPQKSRTE
Trigger: TTCCGTACGGGATTTCTGGGGCAAAGGGTATGGGCATTCAGTATTCTGAGAGAAACTGCCAAATTGCTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430121.3
3UTR GCA 72 bp AGCAGCTCACAGAACATTTTCGAATGTATTTGTTGGTaGAAGGGAATAAATAGCCAGAGCCGAGAAGGCAGA +
Preference number: 3 (lower is better)
Translates to: SSSQNIFECICW*KGINSQSREGR
Trigger: TCTGCCTTCTCGGCTCTGGCTATTTATTCCCTTGCACCAACAAATACATTCGAAAATGTTCTGTGAGCTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430121.3
3UTR GCA 72 bp AGCCTGAGTCTACTTTCAGCCAGAGCAACTCCAGGCTaGAAGTGCAGTTCTATGAAGATTGTACCTTTATTA +
Preference number: 3 (lower is better)
Translates to: SLSLLSARATPG*KCSSMKIVPLL
Trigger: TAATAAAGGTACAATCTTCATAGAACTGCACTTGCAGCCTGGAGTTGCTCTGGCTGAAAGTAGACTCAGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430121.3
3UTR CCA 72 bp TTGAGCAGCTCACAGAACATTTTCGAATGTATTTGTTaGTGCAAGGGAATAAATAGCCAGAGCCGAGAAGGC +
Preference number: 3 (lower is better)
Translates to: LSSSQNIFECIC*CKGINSQSREG
Trigger: GCCTTCTCGGCTCTGGCTATTTATTCCCTTGCACCAACAAATACATTCGAAAATGTTCTGTGAGCTGCTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430121.3
3UTR GCA 72 bp TACACACCTCTACACACACACAAAGTTCTCCCACTCTaGATATGCACGTGCATCACACATTTTTACAGTTTC +
Preference number: 3 (lower is better)
Translates to: YTPLHTHKVLPL*ICTCITHFYSF
Trigger: GAAACTGTAAAAATGTGTGATGCACGTGCATATGCAGAGTGGGAGAACTTTGTGTGTGTGTAGAGGTGTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430121.3
3UTR-3UTR CAA 90 bp TTGAGCAGCTCACAGAACATTTTCGAATGTATTTGTTGGTGCAAGGGAATAAATAGGGACGCTTTGAGATaGAAAACCCCATACTACCTC +
Preference number: 3 (lower is better)
Translates to: LSSSQNIFECICWCKGINRDALR*KTPYYL
Trigger: GAGGTAGTATGGGGTTTTCAATCTCAAAGCGTCCCT...ATTTATTCCCTTGCACCAACAAATACATTCGAAAATGTTCTGTGAGCTGCTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR TCA 90 bp CTCAGGTATTGCATGCAGGCGGGCACACATGCCACCCACACCTACACACCTCTAGCGCCAGTTACCCCCTaGGGCTCCATGGGACCAGGG +
Preference number: 4 (lower is better)
Translates to: LRYCMQAGTHATHTYTPLAPVTP*GSMGPG
Trigger: CCCTGGTCCCATGGAGCCTCAGGGGGTAACTGGCGC...TAGAGGTGTGTAGGTGTGGGTGGCATGTGTGCCCGCCTGCATGCAATACCTGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR GCA 90 bp CTCAGGTATTGCATGCAGGCGGGCACACATGCCACCCACACCTACACACCTCTAACTCGGTATGGTGGATaGCCGGGCACGGGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: LRYCMQAGTHATHTYTPLTRYGG*PGTGPG
Trigger: GCCAGGCCCCGTGCCCGGGCATCCACCATACCGAGT...TAGAGGTGTGTAGGTGTGGGTGGCATGTGTGCCCGCCTGCATGCAATACCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR CCA 90 bp CCAAGAAAATGTGGCCATCAGGATGGATGCTCATTGACTCAGGGCTGTGTGCGGCCCGGGCACGGGGCCTaGCCTGGCCAGTTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: PRKCGHQDGCSLTQGCVRPGHGA*PGQLQL
Trigger: CAGCTGCAACTGGCCAGGCCAGGCCCCGTGCCCGGG...CCGCACACAGCCCTGAGTCAATGAGCATCCATCCTGATGGCCACATTTTCTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273146.6
ENST00000430121.3
CDS-3UTR CCA 90 bp CCAAGAAAATGTGGCCATCAGGATGGATGCTCATTGACTCAGGGCTGTGTGCGGGTCTGGGCCGGCGGATaGACGCTGTGGGGGAAAGCG +
Preference number: 4 (lower is better)
Translates to: PRKCGHQDGCSLTQGCVRVWAGG*TLWGKA
Trigger: CGCTTTCCCCCACAGCGTCCATCCGCCGGCCCAGAC...CCGCACACAGCCCTGAGTCAATGAGCATCCATCCTGATGGCCACATTTTCTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273146.6
ENST00000430121.3
CDS-3UTR CCA 90 bp CCAAGAAAATGTGGCCATCAGGATGGATGCTCATTGACTCAGGGCTGTGTGCGGCATGGGACCAGGGTCTaGGCCGGCGGATGGACGCTG +
Preference number: 4 (lower is better)
Translates to: PRKCGHQDGCSLTQGCVRHGTRV*AGGWTL
Trigger: CAGCGTCCATCCGCCGGCCCAGACCCTGGTCCCATG...CCGCACACAGCCCTGAGTCAATGAGCATCCATCCTGATGGCCACATTTTCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273146.6
ENST00000430121.3
CDS-3UTR CCA 90 bp CCAAGAAAATGTGGCCATCAGGATGGATGCTCATTGACTCAGGGCTGTGTGCGGGGCAGGAGGGGGCTATaGAAGCGGCGGGCCACAGCA +
Preference number: 4 (lower is better)
Translates to: PRKCGHQDGCSLTQGCVRGRRGL*KRRATA
Trigger: TGCTGTGGCCCGCCGCTTCCATAGCCCCCTCCTGCC...CCGCACACAGCCCTGAGTCAATGAGCATCCATCCTGATGGCCACATTTTCTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000273146.6
ENST00000430121.3
CDS-3UTR CCA 90 bp GAAAGAACTCCACCATCCCAGGCAGGTGAAATATCCCGTGACATCCTTGTGCCCCGTGCCCACTCGGTATaGTGGATGCCCGGGCACGGG +
Preference number: 4 (lower is better)
Translates to: ERTPPSQAGEISRDILVPRAHSV*WMPGHG
Trigger: CCCGTGCCCGGGCATCCACCATACCGAGTGGGCACG...GGGCACAAGGATGTCACGGGATATTTCACCTGCCTGGGATGGTGGAGTTCTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273146.6
CDS-3UTR GCA 90 bp TCACTCCCACCTCTGGCTGAGTGTAGGTCTACCAGGCAGAAGGCAAAGCAGAGATCTGGGTCGCTCAGGTaGTGCACATCGGGTGCCCAC +
Preference number: 4 (lower is better)
Translates to: SLPPLAECRSTRQKAKQRSGSLR*CTSGAH
Trigger: GTGGGCACCCGATGTGCAGCACCTGAGCGACCCAGA...TCTCTGCTTTGCCTTCTGCCTGGTAGACCTACACTCAGCCAGAGGTGGGAGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273146.6
CDS-3UTR GCA 90 bp CTCAGGTATTGCATGCAGGCGGGCACACATGCCACCCACACCTACACACCTCTAGAAGAGCGCCAGGCGTaGCCACTCGGTATGGTGGAT +
Preference number: 4 (lower is better)
Translates to: LRYCMQAGTHATHTYTPLEERQA*PLGMVD
Trigger: ATCCACCATACCGAGTGGGCACGCCTGGCGCTCTTC...TAGAGGTGTGTAGGTGTGGGTGGCATGTGTGCCCGCCTGCATGCAATACCTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR CCA 90 bp GAAAGAACTCCACCATCCCAGGCAGGTGAAATATCCCGTGACATCCTTGTGCCCGGCGGATGGACGCTGTaGGGGAAAGCGGGTGACAGC +
Preference number: 4 (lower is better)
Translates to: ERTPPSQAGEISRDILVPGGWTL*GKAGDS
Trigger: GCTGTCACCCGCTTTCCCCCACAGCGTCCATCCGCC...GGGCACAAGGATGTCACGGGATATTTCACCTGCCTGGGATGGTGGAGTTCTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273146.6
CDS-3UTR CCA 90 bp CTGAGTCTACTTTCAGCCAGAGCAACTCCAGGCTGCAAGTGCAGTTCTATGAAGCCCCCTGAGGCTCCATaGGACCAGGGTCTGGGCCGG +
Preference number: 4 (lower is better)
Translates to: LSLLSARATPGCKCSSMKPPEAP*DQGLGR
Trigger: CCGGCCCAGACCCTGGTCCCATGGAGCCTCAGGGGG...CTTCATAGAACTGCACTTGCAGCCTGGAGTTGCTCTGGCTGAAAGTAGACTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR GCA 90 bp CCAAGAAAATGTGGCCATCAGGATGGATGCTCATTGACTCAGGGCTGTGTGCGGGCGGCCGCGAGCCTCTaGGGTCTACTCGGGACTTTT +
Preference number: 4 (lower is better)
Translates to: PRKCGHQDGCSLTQGCVRAAASL*GLLGTF
Trigger: AAAAGTCCCGAGTAGACCGCAGAGGCTCGCGGCCGC...CCGCACACAGCCCTGAGTCAATGAGCATCCATCCTGATGGCCACATTTTCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273146.6
ENST00000430121.3
CDS-3UTR GCA 90 bp TTGCCATTTTCTAGGATGACAAGTGTCTCACTCCCACCTCTGGCTGAGTGTAGGACTCGGTATGGTGGATaGCCGGGCACGGGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: LPFSRMTSVSLPPLAECRTRYGG*PGTGPG
Trigger: GCCAGGCCCCGTGCCCGGGCATCCACCATACCGAGT...CCTACACTCAGCCAGAGGTGGGAGTGAGACACTTGTCATCCTAGAAAATGGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273146.6
CDS-3UTR GCA 90 bp CTCAGGTATTGCATGCAGGCGGGCACACATGCCACCCACACCTACACACCTCTACCCGTGACATCCTTGTaGCCCTCTGGCTTCTGGCTT +
Preference number: 4 (lower is better)
Translates to: LRYCMQAGTHATHTYTPLPVTSL*PSGFWL
Trigger: AAGCCAGAAGCCAGAGGGGCACAAGGATGTCACGGG...TAGAGGTGTGTAGGTGTGGGTGGCATGTGTGCCCGCCTGCATGCAATACCTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR CCA 90 bp TCTCACTCCCACCTCTGGCTGAGTGTAGGTCTACCAGGCAGAAGGCAAAGCAGAGCAGAACGCTATCACTaGCCGCCTCTTGCCACGCAG +
Preference number: 4 (lower is better)
Translates to: SHSHLWLSVGLPGRRQSRAERYH*PPLATQ
Trigger: CTGCGTGGCAAGAGGCGGCCAGTGATAGCGTTCTGC...TCTGCTTTGCCTTCTGCCTGGTAGACCTACACTCAGCCAGAGGTGGGAGTGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273146.6
CDS-3UTR CCA 90 bp CCAAGAAAATGTGGCCATCAGGATGGATGCTCATTGACTCAGGGCTGTGTGCGGGTGGTCTGTCAGCCATaGGGGAGCCTGCCCACCAGT +
Preference number: 4 (lower is better)
Translates to: PRKCGHQDGCSLTQGCVRVVCQP*GSLPTS
Trigger: ACTGGTGGGCAGGCTCCCCCATGGCTGACAGACCAC...CCGCACACAGCCCTGAGTCAATGAGCATCCATCCTGATGGCCACATTTTCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273146.6
ENST00000430121.3
CDS-3UTR CCA 90 bp TTTCTTAAGCCTGAGTCTACTTTCAGCCAGAGCAACTCCAGGCTGCAAGTGCAGGGCAGGAGGGGGCTATaGAAGCGGCGGGCCACAGCA +
Preference number: 4 (lower is better)
Translates to: FLKPESTFSQSNSRLQVQGRRGL*KRRATA
Trigger: TGCTGTGGCCCGCCGCTTCCATAGCCCCCTCCTGCC...CTGCACTTGCAGCCTGGAGTTGCTCTGGCTGAAAGTAGACTCAGGCTTAAGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR CCA 90 bp ACCTACACACCTCTACACACACACAAAGTTCTCCCACTCTGCATATGCACGTGCGCACGGGGCCTGGCCTaGCCAGTTGCAGCTGTGTGC +
Preference number: 4 (lower is better)
Translates to: TYTPLHTHKVLPLCICTCARGLA*PVAAVC
Trigger: GCACACAGCTGCAACTGGCCAGGCCAGGCCCCGTGC...GCACGTGCATATGCAGAGTGGGAGAACTTTGTGTGTGTGTAGAGGTGTGTAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR TCA 90 bp GAAAGAACTCCACCATCCCAGGCAGGTGAAATATCCCGTGACATCCTTGTGCCCGCGGGTTTCCCGGACTaGAGGTGCACACGTTCTCTG +
Preference number: 4 (lower is better)
Translates to: ERTPPSQAGEISRDILVPAGFPD*RCTRSL
Trigger: CAGAGAACGTGTGCACCTTCAGTCCGGGAAACCCGC...GGGCACAAGGATGTCACGGGATATTTCACCTGCCTGGGATGGTGGAGTTCTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273146.6
CDS-3UTR TCA 90 bp TCCTTGGAAAGAACTCCACCATCCCAGGCAGGTGAAATATCCCGTGACATCCTTCGGGTGCCCACCAGATaGCAGGCCTTGCTCCACCGT +
Preference number: 4 (lower is better)
Translates to: SLERTPPSQAGEISRDILRVPTR*QALLHR
Trigger: ACGGTGGAGCAAGGCCTGTCATCTGGTGGGCACCCG...AAGGATGTCACGGGATATTTCACCTGCCTGGGATGGTGGAGTTCTTTCCAAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273146.6
CDS-3UTR TCA 90 bp CTCAGGTATTGCATGCAGGCGGGCACACATGCCACCCACACCTACACACCTCTATTGTCCTCAGGGTGCTaGAGGTTGCCAGCGTTATCG +
Preference number: 4 (lower is better)
Translates to: LRYCMQAGTHATHTYTPLLSSGC*RLPALS
Trigger: CGATAACGCTGGCAACCTTCAGCACCCTGAGGACAA...TAGAGGTGTGTAGGTGTGGGTGGCATGTGTGCCCGCCTGCATGCAATACCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR GCA 90 bp TTGGAAAGAACTCCACCATCCCAGGCAGGTGAAATATCCCGTGACATCCTTGTGAGTTTGCAAAGTCCCTaGCGCGCGTCCCGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: LERTPPSQAGEISRDILVSLQSP*RASRPS
Trigger: GCTGGGCCGGGACGCGCGGCAGGGACTTTGCAAACT...CACAAGGATGTCACGGGATATTTCACCTGCCTGGGATGGTGGAGTTCTTTCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273146.6
CDS-3UTR GCA 90 bp GTCCTCAAGATGAGTGAGCCCAAGAAAATGTGGCCATCAGGATGGATGCTCATTCCAGGCTTCCCAGGATaGGCGGCTACTCGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: VLKMSEPKKMWPSGWMLIPGFPG*AATRLG
Trigger: CCCCAGCCGAGTAGCCGCGCATCCTGGGAAGCCTGG...AATGAGCATCCATCCTGATGGCCACATTTTCTTGGGCTCACTCATCTTGAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273146.6
ENST00000430121.3
CDS-3UTR GCA 90 bp AAAGAACTCCACCATCCCAGGCAGGTGAAATATCCCGTGACATCCTTGTGCCCCCACCACCTCCCCCTGTaGCAACAGACGGAGCATCTG +
Preference number: 4 (lower is better)
Translates to: KELHHPRQVKYPVTSLCPHHLPL*QQTEHL
Trigger: CAGATGCTCCGTCTGTTGGCACAGGGGGAGGTGGTG...GGGGCACAAGGATGTCACGGGATATTTCACCTGCCTGGGATGGTGGAGTTCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000273146.6
CDS-3UTR CCA 90 bp CCAAGAAAATGTGGCCATCAGGATGGATGCTCATTGACTCAGGGCTGTGTGCGGTTCTCTGCAGCCAAGTaGCCCTGCGCCAACTCTCGG +
Preference number: 4 (lower is better)
Translates to: PRKCGHQDGCSLTQGCVRFSAAK*PCANSR
Trigger: CCGAGAGTTGGCGCAGGGCCACTTGGCTGCAGAGAA...CCGCACACAGCCCTGAGTCAATGAGCATCCATCCTGATGGCCACATTTTCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273146.6
ENST00000430121.3
CDS-3UTR CCA 90 bp GTCCTCAAGATGAGTGAGCCCAAGAAAATGTGGCCATCAGGATGGATGCTCATTGTCTGGGCCGGCGGATaGACGCTGTGGGGGAAAGCG +
Preference number: 4 (lower is better)
Translates to: VLKMSEPKKMWPSGWMLIVWAGG*TLWGKA
Trigger: CGCTTTCCCCCACAGCGTCCATCCGCCGGCCCAGAC...AATGAGCATCCATCCTGATGGCCACATTTTCTTGGGCTCACTCATCTTGAGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273146.6
ENST00000430121.3
CDS-3UTR CCA 90 bp TTTCTTAAGCCTGAGTCTACTTTCAGCCAGAGCAACTCCAGGCTGCAAGTGCAGCATGGGCGGGGACCCTaGCTTTGTCCACCACCTCCC +
Preference number: 4 (lower is better)
Translates to: FLKPESTFSQSNSRLQVQHGRGP*LCPPPP
Trigger: GGGAGGTGGTGGACAAAGCCAGGGTCCCCGCCCATG...CTGCACTTGCAGCCTGGAGTTGCTCTGGCTGAAAGTAGACTCAGGCTTAAGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR CCA 90 bp TCTCACTCCCACCTCTGGCTGAGTGTAGGTCTACCAGGCAGAAGGCAAAGCAGAAGGCCACAGAGCCCTTaGGAACAGAGTTGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: SHSHLWLSVGLPGRRQSRRPQSP*EQSWLS
Trigger: GCTCAGCCAACTCTGTTCCCAAGGGCTCTGTGGCCT...TCTGCTTTGCCTTCTGCCTGGTAGACCTACACTCAGCCAGAGGTGGGAGTGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273146.6
CDS-3UTR CCA 90 bp GTCCTCAAGATGAGTGAGCCCAAGAAAATGTGGCCATCAGGATGGATGCTCATTGCACGGGGCCTGGCCTaGCCAGTTGCAGCTGTGTGC +
Preference number: 4 (lower is better)
Translates to: VLKMSEPKKMWPSGWMLIARGLA*PVAAVC
Trigger: GCACACAGCTGCAACTGGCCAGGCCAGGCCCCGTGC...AATGAGCATCCATCCTGATGGCCACATTTTCTTGGGCTCACTCATCTTGAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273146.6
ENST00000430121.3
CDS-3UTR CCA 90 bp ATGAAGATTGTACCTTTATTAGGTTGGTCTCAGGTATTGCATGCAGGCGGGCACGCCCACTCGGTATGGTaGATGCCCGGGCACGGGGCC +
Preference number: 4 (lower is better)
Translates to: MKIVPLLGWSQVLHAGGHAHSVW*MPGHGA
Trigger: GGCCCCGTGCCCGGGCATCCACCATACCGAGTGGGC...GTGCCCGCCTGCATGCAATACCTGAGACCAACCTAATAAAGGTACAATCTTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR CCA 90 bp GTCCTCAAGATGAGTGAGCCCAAGAAAATGTGGCCATCAGGATGGATGCTCATTCGTGCCCACTCGGTATaGTGGATGCCCGGGCACGGG +
Preference number: 4 (lower is better)
Translates to: VLKMSEPKKMWPSGWMLIRAHSV*WMPGHG
Trigger: CCCGTGCCCGGGCATCCACCATACCGAGTGGGCACG...AATGAGCATCCATCCTGATGGCCACATTTTCTTGGGCTCACTCATCTTGAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273146.6
ENST00000430121.3
CDS-3UTR CCA 90 bp CCAAGAAAATGTGGCCATCAGGATGGATGCTCATTGACTCAGGGCTGTGTGCGGCAGCCGCAGCTCGGCTaGGTTCTGGCATTTCTCTCG +
Preference number: 4 (lower is better)
Translates to: PRKCGHQDGCSLTQGCVRQPQLG*VLAFLS
Trigger: CGAGAGAAATGCCAGAACCCAGCCGAGCTGCGGCTG...CCGCACACAGCCCTGAGTCAATGAGCATCCATCCTGATGGCCACATTTTCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273146.6
ENST00000430121.3
CDS-3UTR CCA 90 bp TTGCCATTTTCTAGGATGACAAGTGTCTCACTCCCACCTCTGGCTGAGTGTAGGCTCCGGACCAGGATGTaGACCAGCCGCAGCTCGGCT +
Preference number: 4 (lower is better)
Translates to: LPFSRMTSVSLPPLAECRLRTRM*TSRSSA
Trigger: AGCCGAGCTGCGGCTGGTCCACATCCTGGTCCGGAG...CCTACACTCAGCCAGAGGTGGGAGTGAGACACTTGTCATCCTAGAAAATGGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273146.6
CDS-3UTR TCA 90 bp CCAAGAAAATGTGGCCATCAGGATGGATGCTCATTGACTCAGGGCTGTGTGCGGAGGATGGATGCTCATTaGCTCAGGGCTGTGTGCGGC +
Preference number: 4 (lower is better)
Translates to: PRKCGHQDGCSLTQGCVRRMDAH*LRAVCG
Trigger: GCCGCACACAGCCCTGAGTCAATGAGCATCCATCCT...CCGCACACAGCCCTGAGTCAATGAGCATCCATCCTGATGGCCACATTTTCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273146.6
ENST00000430121.3
CDS-3UTR GCA 90 bp TTGGAAAGAACTCCACCATCCCAGGCAGGTGAAATATCCCGTGACATCCTTGTGGGTGCACACGTTCTCTaGAGCCAAGTGGCCCTGCGC +
Preference number: 4 (lower is better)
Translates to: LERTPPSQAGEISRDILVGAHVL*SQVALR
Trigger: GCGCAGGGCCACTTGGCTGCAGAGAACGTGTGCACC...CACAAGGATGTCACGGGATATTTCACCTGCCTGGGATGGTGGAGTTCTTTCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273146.6
CDS-3UTR GCA 90 bp TTGCCATTTTCTAGGATGACAAGTGTCTCACTCCCACCTCTGGCTGAGTGTAGGCTGCCGGATATGGGTTaGAGGGGCGCCAGTTACCCC +
Preference number: 4 (lower is better)
Translates to: LPFSRMTSVSLPPLAECRLPDMG*RGASYP
Trigger: GGGGTAACTGGCGCCCCTGCAACCCATATCCGGCAG...CCTACACTCAGCCAGAGGTGGGAGTGAGACACTTGTCATCCTAGAAAATGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273146.6
CDS-3UTR GCA 90 bp CTGAGTCTACTTTCAGCCAGAGCAACTCCAGGCTGCAAGTGCAGTTCTATGAAGCTGCCGGATATGGGTTaGAGGGGCGCCAGTTACCCC +
Preference number: 4 (lower is better)
Translates to: LSLLSARATPGCKCSSMKLPDMG*RGASYP
Trigger: GGGGTAACTGGCGCCCCTGCAACCCATATCCGGCAG...CTTCATAGAACTGCACTTGCAGCCTGGAGTTGCTCTGGCTGAAAGTAGACTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR GCA 90 bp TCACTCCCACCTCTGGCTGAGTGTAGGTCTACCAGGCAGAAGGCAAAGCAGAGAATGTTTCTTGCCCGCTaGCTCCGGCTGGAGCTCAAA +
Preference number: 4 (lower is better)
Translates to: SLPPLAECRSTRQKAKQRMFLAR*LRLELK
Trigger: TTTGAGCTCCAGCCGGAGGCAGCGGGCAAGAAACAT...TCTCTGCTTTGCCTTCTGCCTGGTAGACCTACACTCAGCCAGAGGTGGGAGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273146.6
CDS-3UTR GCA 90 bp TCCTTGGAAAGAACTCCACCATCCCAGGCAGGTGAAATATCCCGTGACATCCTTTCTCCTGGATGGGACTaGCATGCTGGGGGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: SLERTPPSQAGEISRDILSPGWD*HAGGGP
Trigger: TGGGCCACCCCCAGCATGGCAGTCCCATCCAGGAGA...AAGGATGTCACGGGATATTTCACCTGCCTGGGATGGTGGAGTTCTTTCCAAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000273146.6
CDS-3UTR GCA 90 bp TTTCTTAAGCCTGAGTCTACTTTCAGCCAGAGCAACTCCAGGCTGCAAGTGCAGTCTGGGTCGCTCAGGTaGTGCACATCGGGTGCCCAC +
Preference number: 4 (lower is better)
Translates to: FLKPESTFSQSNSRLQVQSGSLR*CTSGAH
Trigger: GTGGGCACCCGATGTGCAGCACCTGAGCGACCCAGA...CTGCACTTGCAGCCTGGAGTTGCTCTGGCTGAAAGTAGACTCAGGCTTAAGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR GCA 90 bp GAAAGAACTCCACCATCCCAGGCAGGTGAAATATCCCGTGACATCCTTGTGCCCGGTGAGATGGATCGCTaGTCCGGACCAGGATGTGGA +
Preference number: 4 (lower is better)
Translates to: ERTPPSQAGEISRDILVPGEMDR*SGPGCG
Trigger: TCCACATCCTGGTCCGGAGCAGCGATCCATCTCACC...GGGCACAAGGATGTCACGGGATATTTCACCTGCCTGGGATGGTGGAGTTCTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273146.6
CDS-3UTR CCA 90 bp CTGTTAAACAGAAACTGGCTGAGGCCTAGAGGAACAGCATCACTTGATAAGGGTCCCGCTGCCTCCGGCTaGAGCTCAAAGCCTGCCGGA +
Preference number: 4 (lower is better)
Translates to: LLNRNWLRPRGTASLDKGPAASG*SSKPAG
Trigger: TCCGGCAGGCTTTGAGCTCCAGCCGGAGGCAGCGGG...ACCCTTATCAAGTGATGCTGTTCCTCTAGGCCTCAGCCAGTTTCTGTTTAACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273146.6
CDS-3UTR CCA 90 bp CTCAGGTATTGCATGCAGGCGGGCACACATGCCACCCACACCTACACACCTCTACAGCACAGACCAAGATaGAGTTCCTGGGCAAAGCAC +
Preference number: 4 (lower is better)
Translates to: LRYCMQAGTHATHTYTPLQHRPR*SSWAKH
Trigger: GTGCTTTGCCCAGGAACTCCATCTTGGTCTGTGCTG...TAGAGGTGTGTAGGTGTGGGTGGCATGTGTGCCCGCCTGCATGCAATACCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR CCA 90 bp TCCTTGGAAAGAACTCCACCATCCCAGGCAGGTGAAATATCCCGTGACATCCTTCCTGAGGTCCCCTCCTaGGGACTCCCTGCTTCTGTC +
Preference number: 4 (lower is better)
Translates to: SLERTPPSQAGEISRDILPEVPS*GLPASV
Trigger: GACAGAAGCAGGGAGTCCCCAGGAGGGGACCTCAGG...AAGGATGTCACGGGATATTTCACCTGCCTGGGATGGTGGAGTTCTTTCCAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273146.6
CDS-3UTR CCA 90 bp CCAAGAAAATGTGGCCATCAGGATGGATGCTCATTGACTCAGGGCTGTGTGCGGCTCCTGAGGCCAAGGTaGGATCCTCTGCTTGTTGCC +
Preference number: 4 (lower is better)
Translates to: PRKCGHQDGCSLTQGCVRLLRPR*DPLLVA
Trigger: GGCAACAAGCAGAGGATCCCACCTTGGCCTCAGGAG...CCGCACACAGCCCTGAGTCAATGAGCATCCATCCTGATGGCCACATTTTCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273146.6
ENST00000430121.3
CDS-3UTR CCA 90 bp TCACTCCCACCTCTGGCTGAGTGTAGGTCTACCAGGCAGAAGGCAAAGCAGAGAAGCATCTGCACATCGTaGTCTGTCAGCCATGGGGGA +
Preference number: 4 (lower is better)
Translates to: SLPPLAECRSTRQKAKQRSICTS*SVSHGG
Trigger: TCCCCCATGGCTGACAGACCACGATGTGCAGATGCT...TCTCTGCTTTGCCTTCTGCCTGGTAGACCTACACTCAGCCAGAGGTGGGAGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000273146.6
CDS-3UTR CCA 90 bp TCTCACTCCCACCTCTGGCTGAGTGTAGGTCTACCAGGCAGAAGGCAAAGCAGAAGCACACGATCTACGTaGAAGGACAGGACCTCAGGC +
Preference number: 4 (lower is better)
Translates to: SHSHLWLSVGLPGRRQSRSTRST*KDRTSG
Trigger: GCCTGAGGTCCTGTCCTTCCACGTAGATCGTGTGCT...TCTGCTTTGCCTTCTGCCTGGTAGACCTACACTCAGCCAGAGGTGGGAGTGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273146.6
CDS-3UTR CCA 90 bp GCATGTCAGTCTCTCGGTGGTGAGACAGGATTAGATCTGTTTTATTTCAAAGCGGCCCACTCGGTATGGTaGATGCCCGGGCACGGGGCC +
Preference number: 4 (lower is better)
Translates to: ACQSLGGETGLDLFYFKAAHSVW*MPGHGA
Trigger: GGCCCCGTGCCCGGGCATCCACCATACCGAGTGGGC...CGCTTTGAAATAAAACAGATCTAATCCTGTCTCACCACCGAGAGACTGACATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273146.6
3UTR CAA 72 bp GCCAGAGCCGAGAAGGCAGAAAGGGACGCTTTGAGATaGAAAACCCCATACTACCTCCACCATCCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: ARAEKAERDALR*KTPYYLHHPRQ
Trigger: CTGCCTGGGATGGTGGAGGTAGTATGGGGTTTTCAATCTCAAAGCGTCCCTTTCTGCCTTCTCGGCTCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR TCA 90 bp GAAAGAACTCCACCATCCCAGGCAGGTGAAATATCCCGTGACATCCTTGTGCCCACACGCCGGATCTACTaGGATCTACGGGGATCTGAG +
Preference number: 4 (lower is better)
Translates to: ERTPPSQAGEISRDILVPTRRIY*DLRGSE
Trigger: CTCAGATCCCCGTAGATCTCAGTAGATCCGGCGTGT...GGGCACAAGGATGTCACGGGATATTTCACCTGCCTGGGATGGTGGAGTTCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273146.6
CDS-3UTR TCA 90 bp CACCTCTACACACACACAAAGTTCTCCCACTCTGCATATGCACGTGCATCACACGTGGGGGAAAGCGGGTaGCAGCCATCGCAGATAGGA +
Preference number: 4 (lower is better)
Translates to: HLYTHTKFSHSAYARASHVGESG*QPSQIG
Trigger: TCCTATCTGCGATGGCTGTCACCCGCTTTCCCCCAC...GTGTGATGCACGTGCATATGCAGAGTGGGAGAACTTTGTGTGTGTGTAGAGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR TCA 90 bp CTACTTTCAGCCAGAGCAACTCCAGGCTGCAAGTGCAGTTCTATGAAGATTGTACGGGTGCCCACCAGATaGCAGGCCTTGCTCCACCGT +
Preference number: 4 (lower is better)
Translates to: LLSARATPGCKCSSMKIVRVPTR*QALLHR
Trigger: ACGGTGGAGCAAGGCCTGTCATCTGGTGGGCACCCG...TACAATCTTCATAGAACTGCACTTGCAGCCTGGAGTTGCTCTGGCTGAAAGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR GCA 90 bp GTCCTCAAGATGAGTGAGCCCAAGAAAATGTGGCCATCAGGATGGATGCTCATTCTCTCGGGAGATCGCTaGACACCGGGATACTCCGCG +
Preference number: 4 (lower is better)
Translates to: VLKMSEPKKMWPSGWMLILSGDR*TPGYSA
Trigger: CGCGGAGTATCCCGGTGTGCAGCGATCTCCCGAGAG...AATGAGCATCCATCCTGATGGCCACATTTTCTTGGGCTCACTCATCTTGAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273146.6
ENST00000430121.3
CDS-3UTR GCA 90 bp CCTCTGGCTGAGTGTAGGTCTACCAGGCAGAAGGCAAAGCAGAGACTGTTAAACCTGGAGCTCAAAGCCTaGCGGATATGGGTTGCAGGG +
Preference number: 4 (lower is better)
Translates to: PLAECRSTRQKAKQRLLNLELKA*RIWVAG
Trigger: CCCTGCAACCCATATCCGGCAGGCTTTGAGCTCCAG...GTTTAACAGTCTCTGCTTTGCCTTCTGCCTGGTAGACCTACACTCAGCCAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273146.6
CDS-3UTR GCA 90 bp TCCTTGGAAAGAACTCCACCATCCCAGGCAGGTGAAATATCCCGTGACATCCTTGAAGCCCATGTTTCTTaGCCGCTGCCTCCGGCTGGA +
Preference number: 4 (lower is better)
Translates to: SLERTPPSQAGEISRDILEAHVS*PLPPAG
Trigger: TCCAGCCGGAGGCAGCGGGCAAGAAACATGGGCTTC...AAGGATGTCACGGGATATTTCACCTGCCTGGGATGGTGGAGTTCTTTCCAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273146.6
CDS-3UTR GCA 90 bp GTCCTCAAGATGAGTGAGCCCAAGAAAATGTGGCCATCAGGATGGATGCTCATTTCTCCTGGATGGGACTaGCATGCTGGGGGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: VLKMSEPKKMWPSGWMLISPGWD*HAGGGP
Trigger: TGGGCCACCCCCAGCATGGCAGTCCCATCCAGGAGA...AATGAGCATCCATCCTGATGGCCACATTTTCTTGGGCTCACTCATCTTGAGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273146.6
ENST00000430121.3
CDS-3UTR GCA 90 bp CCAAGAAAATGTGGCCATCAGGATGGATGCTCATTGACTCAGGGCTGTGTGCGGCACCAGTCCTCGAGCTaGTCAACAGCGTCTCAGCAT +
Preference number: 4 (lower is better)
Translates to: PRKCGHQDGCSLTQGCVRHQSSS*STASQH
Trigger: ATGCTGAGACGCTGTTGAGCAGCTCGAGGACTGGTG...CCGCACACAGCCCTGAGTCAATGAGCATCCATCCTGATGGCCACATTTTCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273146.6
ENST00000430121.3
CDS-3UTR GCA 90 bp CTTTTCCCATTTGTCCTCAAGATGAGTGAGCCCAAGAAAATGTGGCCATCAGGAAGCCATGGGGGAGCCTaGCCACCAGTCCTCGAGCTG +
Preference number: 4 (lower is better)
Translates to: LFPFVLKMSEPKKMWPSGSHGGA*PPVLEL
Trigger: CAGCTCGAGGACTGGTGGGCAGGCTCCCCCATGGCT...TCCTGATGGCCACATTTTCTTGGGCTCACTCATCTTGAGGACAAATGGGAAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000273146.6
ENST00000430121.3
CDS-3UTR GCA 90 bp CTGTTAAACAGAAACTGGCTGAGGCCTAGAGGAACAGCATCACTTGATAAGGGTCCAACCTGTAGCACCTaGCCATGGGCGGGGACCCTG +
Preference number: 4 (lower is better)
Translates to: LLNRNWLRPRGTASLDKGPTCST*PWAGTL
Trigger: CAGGGTCCCCGCCCATGGGCAGGTGCTACAGGTTGG...ACCCTTATCAAGTGATGCTGTTCCTCTAGGCCTCAGCCAGTTTCTGTTTAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273146.6
CDS-3UTR GCA 90 bp CTTTTCCCATTTGTCCTCAAGATGAGTGAGCCCAAGAAAATGTGGCCATCAGGAGGGTCGCTCAGGTGCTaGACATCGGGTGCCCACCAG +
Preference number: 4 (lower is better)
Translates to: LFPFVLKMSEPKKMWPSGGSLRC*TSGAHQ
Trigger: CTGGTGGGCACCCGATGTGCAGCACCTGAGCGACCC...TCCTGATGGCCACATTTTCTTGGGCTCACTCATCTTGAGGACAAATGGGAAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273146.6
ENST00000430121.3
CDS-3UTR CCA 90 bp ACACACACACACATACACACCGCTAGGGAGTTTGTGGGACTTATGCTTTTTGTCGGCGGATGGACGCTGTaGGGGAAAGCGGGTGACAGC +
Preference number: 4 (lower is better)
Translates to: THTHIHTAREFVGLMLFVGGWTL*GKAGDS
Trigger: GCTGTCACCCGCTTTCCCCCACAGCGTCCATCCGCC...GACAAAAAGCATAAGTCCCACAAACTCCCTAGCGGTGTGTATGTGTGTGTGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR CCA 90 bp AAAGAACTCCACCATCCCAGGCAGGTGAAATATCCCGTGACATCCTTGTGCCCCTCACTCTGTGTCTCCTaGATGGGACTGCCATGCTGG +
Preference number: 4 (lower is better)
Translates to: KELHHPRQVKYPVTSLCPSLCVS*MGLPCW
Trigger: CCAGCATGGCAGTCCCATCCAGGAGACACAGAGTGA...GGGGCACAAGGATGTCACGGGATATTTCACCTGCCTGGGATGGTGGAGTTCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273146.6
CDS-3UTR CCA 90 bp TCAGCCAGAGCAACTCCAGGCTGCAAGTGCAGTTCTATGAAGATTGTACCTTTACTCCGGACCAGGATGTaGACCAGCCGCAGCTCGGCT +
Preference number: 4 (lower is better)
Translates to: SARATPGCKCSSMKIVPLLRTRM*TSRSSA
Trigger: AGCCGAGCTGCGGCTGGTCCACATCCTGGTCCGGAG...TAAAGGTACAATCTTCATAGAACTGCACTTGCAGCCTGGAGTTGCTCTGGCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR CCA 90 bp GTCCTCAAGATGAGTGAGCCCAAGAAAATGTGGCCATCAGGATGGATGCTCATTCCCTGGGCTCCGCCTTaGCTTTCCCAGAACACTGGG +
Preference number: 4 (lower is better)
Translates to: VLKMSEPKKMWPSGWMLIPWAPP*LSQNTG
Trigger: CCCAGTGTTCTGGGAAAGCCAAGGCGGAGCCCAGGG...AATGAGCATCCATCCTGATGGCCACATTTTCTTGGGCTCACTCATCTTGAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273146.6
ENST00000430121.3
CDS-3UTR TCA 90 bp GCATGTCAGTCTCTCGGTGGTGAGACAGGATTAGATCTGTTTTATTTCAAAGCGAGATCTACGGGGATCTaGGGGAGCCTACCCGCGGCC +
Preference number: 4 (lower is better)
Translates to: ACQSLGGETGLDLFYFKARSTGI*GSLPAA
Trigger: GGCCGCGGGTAGGCTCCCTCAGATCCCCGTAGATCT...CGCTTTGAAATAAAACAGATCTAATCCTGTCTCACCACCGAGAGACTGACATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000273146.6
CDS-3UTR TCA 90 bp AAGATGAGTGAGCCCAAGAAAATGTGGCCATCAGGATGGATGCTCATTGACTCATTCCACACAGGGGTCTaGGGGCTCAGGCTCGAAGCC +
Preference number: 4 (lower is better)
Translates to: KMSEPKKMWPSGWMLIDSFHTGV*GLRLEA
Trigger: GGCTTCGAGCCTGAGCCCTCAGACCCCTGTGTGGAA...TGAGTCAATGAGCATCCATCCTGATGGCCACATTTTCTTGGGCTCACTCATCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273146.6
ENST00000430121.3
CDS-3UTR TCA 90 bp CTGAGTCTACTTTCAGCCAGAGCAACTCCAGGCTGCAAGTGCAGTTCTATGAAGAGGATGGATGCTCATTaGCTCAGGGCTGTGTGCGGC +
Preference number: 4 (lower is better)
Translates to: LSLLSARATPGCKCSSMKRMDAH*LRAVCG
Trigger: GCCGCACACAGCCCTGAGTCAATGAGCATCCATCCT...CTTCATAGAACTGCACTTGCAGCCTGGAGTTGCTCTGGCTGAAAGTAGACTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR GCA 90 bp CATTGTCCACTTGCATGTCAGTCTCTCGGTGGTGAGACAGGATTAGATCTGTTTGCGGCCGCGAGCCTCTaGGGTCTACTCGGGACTTTT +
Preference number: 4 (lower is better)
Translates to: HCPLACQSLGGETGLDLFAAASL*GLLGTF
Trigger: AAAAGTCCCGAGTAGACCGCAGAGGCTCGCGGCCGC...AAACAGATCTAATCCTGTCTCACCACCGAGAGACTGACATGCAAGTGGACAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273146.6
CDS-3UTR GCA 90 bp CTACTTTCAGCCAGAGCAACTCCAGGCTGCAAGTGCAGTTCTATGAAGATTGTAGCAGCCAAGTGGCCCTaGGCCAACTCTCGGGAGATC +
Preference number: 4 (lower is better)
Translates to: LLSARATPGCKCSSMKIVAAKWP*ANSREI
Trigger: GATCTCCCGAGAGTTGGCGCAGGGCCACTTGGCTGC...TACAATCTTCATAGAACTGCACTTGCAGCCTGGAGTTGCTCTGGCTGAAAGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR GCA 90 bp CTTTTCCCATTTGTCCTCAAGATGAGTGAGCCCAAGAAAATGTGGCCATCAGGAGGTGCACACGTTCTCTaGAGCCAAGTGGCCCTGCGC +
Preference number: 4 (lower is better)
Translates to: LFPFVLKMSEPKKMWPSGGAHVL*SQVALR
Trigger: GCGCAGGGCCACTTGGCTGCAGAGAACGTGTGCACC...TCCTGATGGCCACATTTTCTTGGGCTCACTCATCTTGAGGACAAATGGGAAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273146.6
ENST00000430121.3
CDS-3UTR GCA 90 bp ACCTACACACCTCTACACACACACAAAGTTCTCCCACTCTGCATATGCACGTGCCTGGAGCTCAAAGCCTaGCGGATATGGGTTGCAGGG +
Preference number: 4 (lower is better)
Translates to: TYTPLHTHKVLPLCICTCLELKA*RIWVAG
Trigger: CCCTGCAACCCATATCCGGCAGGCTTTGAGCTCCAG...GCACGTGCATATGCAGAGTGGGAGAACTTTGTGTGTGTGTAGAGGTGTGTAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR GCA 90 bp CCAAGAAAATGTGGCCATCAGGATGGATGCTCATTGACTCAGGGCTGTGTGCGGCTTGCTCTATGGCCTTaGTCCTCAGCACAGACCAAG +
Preference number: 4 (lower is better)
Translates to: PRKCGHQDGCSLTQGCVRLALWP*SSAQTK
Trigger: CTTGGTCTGTGCTGAGGAGCAAGGCCATAGAGCAAG...CCGCACACAGCCCTGAGTCAATGAGCATCCATCCTGATGGCCACATTTTCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273146.6
ENST00000430121.3
CDS-3UTR GCA 90 bp TCTACCAGGCAGAAGGCAAAGCAGAGACTGTTAAACAGAAACTGGCTGAGGCCTCTCCTGGGGACTCCCTaGTTCTGTCCACTCTTGCTC +
Preference number: 4 (lower is better)
Translates to: STRQKAKQRLLNRNWLRPLLGTP*FCPLLL
Trigger: GAGCAAGAGTGGACAGAAGCAGGGAGTCCCCAGGAG...AGGCCTCAGCCAGTTTCTGTTTAACAGTCTCTGCTTTGCCTTCTGCCTGGTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273146.6
CDS-3UTR CCA 90 bp GTCCTCAAGATGAGTGAGCCCAAGAAAATGTGGCCATCAGGATGGATGCTCATTGCAGAACGCTATCACTaGCCGCCTCTTGCCACGCAG +
Preference number: 4 (lower is better)
Translates to: VLKMSEPKKMWPSGWMLIAERYH*PPLATQ
Trigger: CTGCGTGGCAAGAGGCGGCCAGTGATAGCGTTCTGC...AATGAGCATCCATCCTGATGGCCACATTTTCTTGGGCTCACTCATCTTGAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273146.6
ENST00000430121.3
CDS-3UTR CCA 90 bp TTGGAAAGAACTCCACCATCCCAGGCAGGTGAAATATCCCGTGACATCCTTGTGAAAGCCTGCCGGATATaGGTTGCAGGGGCGCCAGTT +
Preference number: 4 (lower is better)
Translates to: LERTPPSQAGEISRDILVKACRI*VAGAPV
Trigger: AACTGGCGCCCCTGCAACCCATATCCGGCAGGCTTT...CACAAGGATGTCACGGGATATTTCACCTGCCTGGGATGGTGGAGTTCTTTCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273146.6
CDS-3UTR CCA 90 bp TTGCCATTTTCTAGGATGACAAGTGTCTCACTCCCACCTCTGGCTGAGTGTAGGTCTGTGTCTCCTGGATaGGACTGCCATGCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: LPFSRMTSVSLPPLAECRSVSPG*DCHAGG
Trigger: ACCCCCAGCATGGCAGTCCCATCCAGGAGACACAGA...CCTACACTCAGCCAGAGGTGGGAGTGAGACACTTGTCATCCTAGAAAATGGCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273146.6
CDS-3UTR CCA 90 bp CACCTCTACACACACACAAAGTTCTCCCACTCTGCATATGCACGTGCATCACACCTGCCTTCTGCTGTATaGGGCCAGAGTGTCAGCCCA +
Preference number: 4 (lower is better)
Translates to: HLYTHTKFSHSAYARASHLPSAV*GQSVSP
Trigger: TGGGCTGACACTCTGGCCCCATACAGCAGAAGGCAG...GTGTGATGCACGTGCATATGCAGAGTGGGAGAACTTTGTGTGTGTGTAGAGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR CCA 90 bp ATGAAGATTGTACCTTTATTAGGTTGGTCTCAGGTATTGCATGCAGGCGGGCACTGTAGCACCTGCCCATaGGCGGGGACCCTGGCTTTG +
Preference number: 4 (lower is better)
Translates to: MKIVPLLGWSQVLHAGGHCSTCP*AGTLAL
Trigger: CAAAGCCAGGGTCCCCGCCCATGGGCAGGTGCTACA...GTGCCCGCCTGCATGCAATACCTGAGACCAACCTAATAAAGGTACAATCTTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR CCA 90 bp TCTACCAGGCAGAAGGCAAAGCAGAGACTGTTAAACAGAAACTGGCTGAGGCCTCCTTGGGAACAGAGTTaGCTGAGCCTGGGAGAGGAC +
Preference number: 4 (lower is better)
Translates to: STRQKAKQRLLNRNWLRPPWEQS*LSLGED
Trigger: GTCCTCTCCCAGGCTCAGCCAACTCTGTTCCCAAGG...AGGCCTCAGCCAGTTTCTGTTTAACAGTCTCTGCTTTGCCTTCTGCCTGGTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273146.6
CDS-3UTR CCA 90 bp CTGAGTCTACTTTCAGCCAGAGCAACTCCAGGCTGCAAGTGCAGTTCTATGAAGAGCTCGGCTGGGTTCTaGCATTTCTCTCGGAGCCTC +
Preference number: 4 (lower is better)
Translates to: LSLLSARATPGCKCSSMKSSAGF*HFSRSL
Trigger: GAGGCTCCGAGAGAAATGCCAGAACCCAGCCGAGCT...CTTCATAGAACTGCACTTGCAGCCTGGAGTTGCTCTGGCTGAAAGTAGACTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR CCA 90 bp GTCCTCAAGATGAGTGAGCCCAAGAAAATGTGGCCATCAGGATGGATGCTCATTCAGCCGCAGCTCGGCTaGGTTCTGGCATTTCTCTCG +
Preference number: 4 (lower is better)
Translates to: VLKMSEPKKMWPSGWMLIQPQLG*VLAFLS
Trigger: CGAGAGAAATGCCAGAACCCAGCCGAGCTGCGGCTG...AATGAGCATCCATCCTGATGGCCACATTTTCTTGGGCTCACTCATCTTGAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273146.6
ENST00000430121.3
CDS-3UTR CCA 90 bp AAGATGAGTGAGCCCAAGAAAATGTGGCCATCAGGATGGATGCTCATTGACTCACCCTGGGCTCCGCCTTaGCTTTCCCAGAACACTGGG +
Preference number: 4 (lower is better)
Translates to: KMSEPKKMWPSGWMLIDSPWAPP*LSQNTG
Trigger: CCCAGTGTTCTGGGAAAGCCAAGGCGGAGCCCAGGG...TGAGTCAATGAGCATCCATCCTGATGGCCACATTTTCTTGGGCTCACTCATCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273146.6
ENST00000430121.3
CDS-3UTR CCA 90 bp ACACACACACACATACACACCGCTAGGGAGTTTGTGGGACTTATGCTTTTTGTCACCTGCTTCAGCCCCTaGGCTCCGCCTTGGCTTTCC +
Preference number: 4 (lower is better)
Translates to: THTHIHTAREFVGLMLFVTCFSP*APPWLS
Trigger: GGAAAGCCAAGGCGGAGCCCAGGGGCTGAAGCAGGT...GACAAAAAGCATAAGTCCCACAAACTCCCTAGCGGTGTGTATGTGTGTGTGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR TCA 90 bp CTGTTAAACAGAAACTGGCTGAGGCCTAGAGGAACAGCATCACTTGATAAGGGTGTGGGGGAAAGCGGGTaGCAGCCATCGCAGATAGGA +
Preference number: 4 (lower is better)
Translates to: LLNRNWLRPRGTASLDKGVGESG*QPSQIG
Trigger: TCCTATCTGCGATGGCTGTCACCCGCTTTCCCCCAC...ACCCTTATCAAGTGATGCTGTTCCTCTAGGCCTCAGCCAGTTTCTGTTTAACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000273146.6
CDS-3UTR GCA 90 bp CTGTTAAACAGAAACTGGCTGAGGCCTAGAGGAACAGCATCACTTGATAAGGGTTCACTGGCCGCCTCTTaGCACGCAGCTTTCTCCGGA +
Preference number: 4 (lower is better)
Translates to: LLNRNWLRPRGTASLDKGSLAAS*HAAFSG
Trigger: TCCGGAGAAAGCTGCGTGGCAAGAGGCGGCCAGTGA...ACCCTTATCAAGTGATGCTGTTCCTCTAGGCCTCAGCCAGTTTCTGTTTAACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273146.6
CDS-3UTR GCA 90 bp ACACACACACACATACACACCGCTAGGGAGTTTGTGGGACTTATGCTTTTTGTCTCACTGGCCGCCTCTTaGCACGCAGCTTTCTCCGGA +
Preference number: 4 (lower is better)
Translates to: THTHIHTAREFVGLMLFVSLAAS*HAAFSG
Trigger: TCCGGAGAAAGCTGCGTGGCAAGAGGCGGCCAGTGA...GACAAAAAGCATAAGTCCCACAAACTCCCTAGCGGTGTGTATGTGTGTGTGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR GCA 90 bp ATTGTACCTTTATTAGGTTGGTCTCAGGTATTGCATGCAGGCGGGCACACATGCCTCCTGGGGACTCCCTaGTTCTGTCCACTCTTGCTC +
Preference number: 4 (lower is better)
Translates to: IVPLLGWSQVLHAGGHTCLLGTP*FCPLLL
Trigger: GAGCAAGAGTGGACAGAAGCAGGGAGTCCCCAGGAG...GCATGTGTGCCCGCCTGCATGCAATACCTGAGACCAACCTAATAAAGGTACAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR GCA 90 bp TCCTTGGAAAGAACTCCACCATCCCAGGCAGGTGAAATATCCCGTGACATCCTTGGATCCTCTGCTTGTTaGCCACCAGTCAAGGCTCTG +
Preference number: 4 (lower is better)
Translates to: SLERTPPSQAGEISRDILGSSAC*PPVKAL
Trigger: CAGAGCCTTGACTGGTGGGCAACAAGCAGAGGATCC...AAGGATGTCACGGGATATTTCACCTGCCTGGGATGGTGGAGTTCTTTCCAAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273146.6
CDS-3UTR GCA 90 bp TTGCCATTTTCTAGGATGACAAGTGTCTCACTCCCACCTCTGGCTGAGTGTAGGCACCAGTCCTCGAGCTaGTCAACAGCGTCTCAGCAT +
Preference number: 4 (lower is better)
Translates to: LPFSRMTSVSLPPLAECRHQSSS*STASQH
Trigger: ATGCTGAGACGCTGTTGAGCAGCTCGAGGACTGGTG...CCTACACTCAGCCAGAGGTGGGAGTGAGACACTTGTCATCCTAGAAAATGGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273146.6
CDS-3UTR GCA 90 bp CCTCTGGCTGAGTGTAGGTCTACCAGGCAGAAGGCAAAGCAGAGACTGTTAAACAACACTGGGTCCATCTaGAGCGACTTCAGCAGCATG +
Preference number: 4 (lower is better)
Translates to: PLAECRSTRQKAKQRLLNNTGSI*SDFSSM
Trigger: CATGCTGCTGAAGTCGCTGCAGATGGACCCAGTGTT...GTTTAACAGTCTCTGCTTTGCCTTCTGCCTGGTAGACCTACACTCAGCCAGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273146.6
CDS-3UTR GCA 90 bp GTCCTCAAGATGAGTGAGCCCAAGAAAATGTGGCCATCAGGATGGATGCTCATTCCCGTGACATCCTTGTaGCCCTCTGGCTTCTGGCTT +
Preference number: 4 (lower is better)
Translates to: VLKMSEPKKMWPSGWMLIPVTSL*PSGFWL
Trigger: AAGCCAGAAGCCAGAGGGGCACAAGGATGTCACGGG...AATGAGCATCCATCCTGATGGCCACATTTTCTTGGGCTCACTCATCTTGAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273146.6
ENST00000430121.3
CDS-3UTR GCA 90 bp CTCAGGTATTGCATGCAGGCGGGCACACATGCCACCCACACCTACACACCTCTACTCCCACTCTGCATATaGACGTGCATCACACATTTT +
Preference number: 4 (lower is better)
Translates to: LRYCMQAGTHATHTYTPLLPLCI*TCITHF
Trigger: AAAATGTGTGATGCACGTGCATATGCAGAGTGGGAG...TAGAGGTGTGTAGGTGTGGGTGGCATGTGTGCCCGCCTGCATGCAATACCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR GCA 90 bp CTCAGGTATTGCATGCAGGCGGGCACACATGCCACCCACACCTACACACCTCTAAAAGTTCTCCCACTCTaGATATGCACGTGCATCACA +
Preference number: 4 (lower is better)
Translates to: LRYCMQAGTHATHTYTPLKVLPL*ICTCIT
Trigger: TGTGATGCACGTGCATATGCAGAGTGGGAGAACTTT...TAGAGGTGTGTAGGTGTGGGTGGCATGTGTGCCCGCCTGCATGCAATACCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR CCA 90 bp CTGTTAAACAGAAACTGGCTGAGGCCTAGAGGAACAGCATCACTTGATAAGGGTTTCTCTGCAGCCAAGTaGCCCTGCGCCAACTCTCGG +
Preference number: 4 (lower is better)
Translates to: LLNRNWLRPRGTASLDKGFSAAK*PCANSR
Trigger: CCGAGAGTTGGCGCAGGGCCACTTGGCTGCAGAGAA...ACCCTTATCAAGTGATGCTGTTCCTCTAGGCCTCAGCCAGTTTCTGTTTAACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273146.6
CDS-3UTR CCA 90 bp CAGAACATTTTCGAATGTATTTGTTGGTGCAAGGGAATAAATAGCCAGAGCCGACCCGCTGCCTCCGGCTaGAGCTCAAAGCCTGCCGGA +
Preference number: 4 (lower is better)
Translates to: QNIFECICWCKGINSQSRPAASG*SSKPAG
Trigger: TCCGGCAGGCTTTGAGCTCCAGCCGGAGGCAGCGGG...TCGGCTCTGGCTATTTATTCCCTTGCACCAACAAATACATTCGAAAATGTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR CCA 90 bp TTGGAAAGAACTCCACCATCCCAGGCAGGTGAAATATCCCGTGACATCCTTGTGCCAAGATGGAGTTCCTaGGCAAAGCACGGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: LERTPPSQAGEISRDILVPRWSS*AKHGFS
Trigger: GGAGAAGCCGTGCTTTGCCCAGGAACTCCATCTTGG...CACAAGGATGTCACGGGATATTTCACCTGCCTGGGATGGTGGAGTTCTTTCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273146.6
CDS-3UTR CCA 90 bp CACCTCTACACACACACAAAGTTCTCCCACTCTGCATATGCACGTGCATCACACCCAAGATGGAGTTCCTaGGCAAAGCACGGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: HLYTHTKFSHSAYARASHPRWSS*AKHGFS
Trigger: GGAGAAGCCGTGCTTTGCCCAGGAACTCCATCTTGG...GTGTGATGCACGTGCATATGCAGAGTGGGAGAACTTTGTGTGTGTGTAGAGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR CCA 90 bp CCTCTGGCTGAGTGTAGGTCTACCAGGCAGAAGGCAAAGCAGAGACTGTTAAACCAGCACAGACCAAGATaGAGTTCCTGGGCAAAGCAC +
Preference number: 4 (lower is better)
Translates to: PLAECRSTRQKAKQRLLNQHRPR*SSWAKH
Trigger: GTGCTTTGCCCAGGAACTCCATCTTGGTCTGTGCTG...GTTTAACAGTCTCTGCTTTGCCTTCTGCCTGGTAGACCTACACTCAGCCAGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273146.6
CDS-3UTR CCA 90 bp GCATGTCAGTCTCTCGGTGGTGAGACAGGATTAGATCTGTTTTATTTCAAAGCGTGTAGCACCTGCCCATaGGCGGGGACCCTGGCTTTG +
Preference number: 4 (lower is better)
Translates to: ACQSLGGETGLDLFYFKACSTCP*AGTLAL
Trigger: CAAAGCCAGGGTCCCCGCCCATGGGCAGGTGCTACA...CGCTTTGAAATAAAACAGATCTAATCCTGTCTCACCACCGAGAGACTGACATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273146.6
CDS-3UTR CCA 90 bp GTCCTCAAGATGAGTGAGCCCAAGAAAATGTGGCCATCAGGATGGATGCTCATTCGATCCAAGCGGTCGTaGACCTGCAACAGGAAGTCG +
Preference number: 4 (lower is better)
Translates to: VLKMSEPKKMWPSGWMLIRSKRS*TCNRKS
Trigger: CGACTTCCTGTTGCAGGTCCACGACCGCTTGGATCG...AATGAGCATCCATCCTGATGGCCACATTTTCTTGGGCTCACTCATCTTGAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273146.6
ENST00000430121.3
CDS-3UTR TCA 90 bp TGGGAGAAATGTAAATTGACACCACCATTTCAGAGAGCAATTTGGCAGTTTCTCAGATCTACGGGGATCTaGGGGAGCCTACCCGCGGCC +
Preference number: 4 (lower is better)
Translates to: WEKCKLTPPFQRAIWQFLRSTGI*GSLPAA
Trigger: GGCCGCGGGTAGGCTCCCTCAGATCCCCGTAGATCT...GAGAAACTGCCAAATTGCTCTCTGAAATGGTGGTGTCAATTTACATTTCTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR TCA 90 bp GTCCTCAAGATGAGTGAGCCCAAGAAAATGTGGCCATCAGGATGGATGCTCATTACACGCCGGATCTACTaGGATCTACGGGGATCTGAG +
Preference number: 4 (lower is better)
Translates to: VLKMSEPKKMWPSGWMLITRRIY*DLRGSE
Trigger: CTCAGATCCCCGTAGATCTCAGTAGATCCGGCGTGT...AATGAGCATCCATCCTGATGGCCACATTTTCTTGGGCTCACTCATCTTGAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273146.6
ENST00000430121.3
CDS-3UTR TCA 90 bp ACTCTGCATATGCACGTGCATCACACATTTTTACAGTTTCTTGAGCAGCTCACATTCCACACAGGGGTCTaGGGGCTCAGGCTCGAAGCC +
Preference number: 4 (lower is better)
Translates to: TLHMHVHHTFLQFLEQLTFHTGV*GLRLEA
Trigger: GGCTTCGAGCCTGAGCCCTCAGACCCCTGTGTGGAA...TGTGAGCTGCTCAAGAAACTGTAAAAATGTGTGATGCACGTGCATATGCAGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR TCA 90 bp CCAAGAAAATGTGGCCATCAGGATGGATGCTCATTGACTCAGGGCTGTGTGCGGTCAGTCTCTCGGTGGTaGGACAGGATTAGATCTGTT +
Preference number: 4 (lower is better)
Translates to: PRKCGHQDGCSLTQGCVRSVSRW*DRIRSV
Trigger: AACAGATCTAATCCTGTCTCACCACCGAGAGACTGA...CCGCACACAGCCCTGAGTCAATGAGCATCCATCCTGATGGCCACATTTTCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273146.6
CDS-3UTR GCA 90 bp GTCCTCAAGATGAGTGAGCCCAAGAAAATGTGGCCATCAGGATGGATGCTCATTATGTTTCTTGCCCGCTaGCTCCGGCTGGAGCTCAAA +
Preference number: 4 (lower is better)
Translates to: VLKMSEPKKMWPSGWMLIMFLAR*LRLELK
Trigger: TTTGAGCTCCAGCCGGAGGCAGCGGGCAAGAAACAT...AATGAGCATCCATCCTGATGGCCACATTTTCTTGGGCTCACTCATCTTGAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273146.6
ENST00000430121.3
CDS-3UTR GCA 90 bp TTTCTTAAGCCTGAGTCTACTTTCAGCCAGAGCAACTCCAGGCTGCAAGTGCAGGCTTCTGTCCACTCTTaGTCTATGGCCTTGCTCCTC +
Preference number: 4 (lower is better)
Translates to: FLKPESTFSQSNSRLQVQASVHS*SMALLL
Trigger: GAGGAGCAAGGCCATAGAGCAAGAGTGGACAGAAGC...CTGCACTTGCAGCCTGGAGTTGCTCTGGCTGAAAGTAGACTCAGGCTTAAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR GCA 90 bp TGGGAGAAATGTAAATTGACACCACCATTTCAGAGAGCAATTTGGCAGTTTCTCAGCCATGGGGGAGCCTaGCCACCAGTCCTCGAGCTG +
Preference number: 4 (lower is better)
Translates to: WEKCKLTPPFQRAIWQFLSHGGA*PPVLEL
Trigger: CAGCTCGAGGACTGGTGGGCAGGCTCCCCCATGGCT...GAGAAACTGCCAAATTGCTCTCTGAAATGGTGGTGTCAATTTACATTTCTCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR GCA 90 bp TGGGAGAAATGTAAATTGACACCACCATTTCAGAGAGCAATTTGGCAGTTTCTCCCAACCTGTAGCACCTaGCCATGGGCGGGGACCCTG +
Preference number: 4 (lower is better)
Translates to: WEKCKLTPPFQRAIWQFLPTCST*PWAGTL
Trigger: CAGGGTCCCCGCCCATGGGCAGGTGCTACAGGTTGG...GAGAAACTGCCAAATTGCTCTCTGAAATGGTGGTGTCAATTTACATTTCTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR GCA 90 bp ACTCTGCATATGCACGTGCATCACACATTTTTACAGTTTCTTGAGCAGCTCACAAGCACCTGTCCTCGCTaGTCCAGGGTCTGGAGGACC +
Preference number: 4 (lower is better)
Translates to: TLHMHVHHTFLQFLEQLTSTCPR*SRVWRT
Trigger: GGTCCTCCAGACCCTGGAGCAGCGAGGACAGGTGCT...TGTGAGCTGCTCAAGAAACTGTAAAAATGTGTGATGCACGTGCATATGCAGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR GCA 90 bp CCAAGAAAATGTGGCCATCAGGATGGATGCTCATTGACTCAGGGCTGTGTGCGGAAGAGTGTGAGGTTGTaGTTTTGGATGTGTCCCAGC +
Preference number: 4 (lower is better)
Translates to: PRKCGHQDGCSLTQGCVRKSVRL*FWMCPS
Trigger: GCTGGGACACATCCAAAAGCACAACCTCACACTCTT...CCGCACACAGCCCTGAGTCAATGAGCATCCATCCTGATGGCCACATTTTCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273146.6
ENST00000430121.3
CDS-3UTR CCA 90 bp AGTTTTATTATTATATGTAGTTTGGGCATTGTCCACTTGCATGTCAGTCTCTCGGCGCGGCTACTCGGCTaGGGCGGGTTTCCCGGACTG +
Preference number: 4 (lower is better)
Translates to: SFIIICSLGIVHLHVSLSARLLG*GGFPGL
Trigger: CAGTCCGGGAAACCCGCCCCAGCCGAGTAGCCGCGC...CGAGAGACTGACATGCAAGTGGACAATGCCCAAACTACATATAATAATAAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273146.6
CDS-3UTR CCA 90 bp GACAGGATTAGATCTGTTTTATTTCAAAGCGGCTGGTTAAGTCACAAAGTAGAACCCCCTGAGGCTCCATaGGACCAGGGTCTGGGCCGG +
Preference number: 4 (lower is better)
Translates to: DRIRSVLFQSGWLSHKVEPPEAP*DQGLGR
Trigger: CCGGCCCAGACCCTGGTCCCATGGAGCCTCAGGGGG...TTCTACTTTGTGACTTAACCAGCCGCTTTGAAATAAAACAGATCTAATCCTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273146.6
CDS-3UTR CCA 90 bp CTACTTTCAGCCAGAGCAACTCCAGGCTGCAAGTGCAGTTCTATGAAGATTGTAAAAGCCTGCCGGATATaGGTTGCAGGGGCGCCAGTT +
Preference number: 4 (lower is better)
Translates to: LLSARATPGCKCSSMKIVKACRI*VAGAPV
Trigger: AACTGGCGCCCCTGCAACCCATATCCGGCAGGCTTT...TACAATCTTCATAGAACTGCACTTGCAGCCTGGAGTTGCTCTGGCTGAAAGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR CCA 90 bp GTCCTCAAGATGAGTGAGCCCAAGAAAATGTGGCCATCAGGATGGATGCTCATTGGTGGCCCAGGTCTTTaGTTCCTGGATCTCCAACCT +
Preference number: 4 (lower is better)
Translates to: VLKMSEPKKMWPSGWMLIGGPGL*FLDLQP
Trigger: AGGTTGGAGATCCAGGAACCAAAGACCTGGGCCACC...AATGAGCATCCATCCTGATGGCCACATTTTCTTGGGCTCACTCATCTTGAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273146.6
ENST00000430121.3
CDS-3UTR CCA 90 bp AAGATGAGTGAGCCCAAGAAAATGTGGCCATCAGGATGGATGCTCATTGACTCATCTGTGTCTCCTGGATaGGACTGCCATGCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: KMSEPKKMWPSGWMLIDSSVSPG*DCHAGG
Trigger: ACCCCCAGCATGGCAGTCCCATCCAGGAGACACAGA...TGAGTCAATGAGCATCCATCCTGATGGCCACATTTTCTTGGGCTCACTCATCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273146.6
ENST00000430121.3
CDS-3UTR CCA 90 bp AAGATGAGTGAGCCCAAGAAAATGTGGCCATCAGGATGGATGCTCATTGACTCATGCCATGTCACTCCCTaGGAGTGGACTGACCAGGGT +
Preference number: 4 (lower is better)
Translates to: KMSEPKKMWPSGWMLIDSCHVTP*EWTDQG
Trigger: ACCCTGGTCAGTCCACTCCCAGGGAGTGACATGGCA...TGAGTCAATGAGCATCCATCCTGATGGCCACATTTTCTTGGGCTCACTCATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273146.6
ENST00000430121.3
CDS-3UTR CCA 90 bp ACACACACACACATACACACCGCTAGGGAGTTTGTGGGACTTATGCTTTTTGTCTGCCATGTCACTCCCTaGGAGTGGACTGACCAGGGT +
Preference number: 4 (lower is better)
Translates to: THTHIHTAREFVGLMLFVCHVTP*EWTDQG
Trigger: ACCCTGGTCAGTCCACTCCCAGGGAGTGACATGGCA...GACAAAAAGCATAAGTCCCACAAACTCCCTAGCGGTGTGTATGTGTGTGTGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR CCA 90 bp TCAGCCAGAGCAACTCCAGGCTGCAAGTGCAGTTCTATGAAGATTGTACCTTTACCTTGGGAACAGAGTTaGCTGAGCCTGGGAGAGGAC +
Preference number: 4 (lower is better)
Translates to: SARATPGCKCSSMKIVPLPWEQS*LSLGED
Trigger: GTCCTCTCCCAGGCTCAGCCAACTCTGTTCCCAAGG...TAAAGGTACAATCTTCATAGAACTGCACTTGCAGCCTGGAGTTGCTCTGGCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR CCA 90 bp ACACACACACACATACACACCGCTAGGGAGTTTGTGGGACTTATGCTTTTTGTCAGGCCACAGAGCCCTTaGGAACAGAGTTGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: THTHIHTAREFVGLMLFVRPQSP*EQSWLS
Trigger: GCTCAGCCAACTCTGTTCCCAAGGGCTCTGTGGCCT...GACAAAAAGCATAAGTCCCACAAACTCCCTAGCGGTGTGTATGTGTGTGTGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR CCA 90 bp ATTGTACCTTTATTAGGTTGGTCTCAGGTATTGCATGCAGGCGGGCACACATGCAGCACACGATCTACGTaGAAGGACAGGACCTCAGGC +
Preference number: 4 (lower is better)
Translates to: IVPLLGWSQVLHAGGHTCSTRST*KDRTSG
Trigger: GCCTGAGGTCCTGTCCTTCCACGTAGATCGTGTGCT...GCATGTGTGCCCGCCTGCATGCAATACCTGAGACCAACCTAATAAAGGTACAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR CCA 90 bp CTTTTCCCATTTGTCCTCAAGATGAGTGAGCCCAAGAAAATGTGGCCATCAGGACGATCCAAGCGGTCGTaGACCTGCAACAGGAAGTCG +
Preference number: 4 (lower is better)
Translates to: LFPFVLKMSEPKKMWPSGRSKRS*TCNRKS
Trigger: CGACTTCCTGTTGCAGGTCCACGACCGCTTGGATCG...TCCTGATGGCCACATTTTCTTGGGCTCACTCATCTTGAGGACAAATGGGAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273146.6
ENST00000430121.3
CDS-3UTR CCA 90 bp AAGATGAGTGAGCCCAAGAAAATGTGGCCATCAGGATGGATGCTCATTGACTCAGTAGACCAGGTGAGATaGATCGCTGCTCCGGACCAG +
Preference number: 4 (lower is better)
Translates to: KMSEPKKMWPSGWMLIDSVDQVR*IAAPDQ
Trigger: CTGGTCCGGAGCAGCGATCCATCTCACCTGGTCTAC...TGAGTCAATGAGCATCCATCCTGATGGCCACATTTTCTTGGGCTCACTCATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273146.6
ENST00000430121.3
CDS-3UTR CCA 90 bp TCCTTGGAAAGAACTCCACCATCCCAGGCAGGTGAAATATCCCGTGACATCCTTGCTTTCCCAGAACACTaGGTCCATCTGCAGCGACTT +
Preference number: 4 (lower is better)
Translates to: SLERTPPSQAGEISRDILAFPEH*VHLQRL
Trigger: AAGTCGCTGCAGATGGACCCAGTGTTCTGGGAAAGC...AAGGATGTCACGGGATATTTCACCTGCCTGGGATGGTGGAGTTCTTTCCAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273146.6
CDS-3UTR CCA 90 bp TTGGAAAGAACTCCACCATCCCAGGCAGGTGAAATATCCCGTGACATCCTTGTGGTGAGGTTGTGCTTTTaGATGTGTCCCAGCAGCACC +
Preference number: 4 (lower is better)
Translates to: LERTPPSQAGEISRDILVVRLCF*MCPSST
Trigger: GGTGCTGCTGGGACACATCCAAAAGCACAACCTCAC...CACAAGGATGTCACGGGATATTTCACCTGCCTGGGATGGTGGAGTTCTTTCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273146.6
CDS-3UTR CCA 90 bp ACCTACACACCTCTACACACACACAAAGTTCTCCCACTCTGCATATGCACGTGCGTGAGGTTGTGCTTTTaGATGTGTCCCAGCAGCACC +
Preference number: 4 (lower is better)
Translates to: TYTPLHTHKVLPLCICTCVRLCF*MCPSST
Trigger: GGTGCTGCTGGGACACATCCAAAAGCACAACCTCAC...GCACGTGCATATGCAGAGTGGGAGAACTTTGTGTGTGTGTAGAGGTGTGTAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR CCA 90 bp CTTTTCCCATTTGTCCTCAAGATGAGTGAGCCCAAGAAAATGTGGCCATCAGGAGCTGTGTGCGGCTTATaGGTCCTCGTCCCTGAAGAG +
Preference number: 4 (lower is better)
Translates to: LFPFVLKMSEPKKMWPSGAVCGL*VLVPEE
Trigger: CTCTTCAGGGACGAGGACCCATAAGCCGCACACAGC...TCCTGATGGCCACATTTTCTTGGGCTCACTCATCTTGAGGACAAATGGGAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273146.6
ENST00000430121.3
CDS-3UTR CCA 90 bp TCTACCAGGCAGAAGGCAAAGCAGAGACTGTTAAACAGAAACTGGCTGAGGCCTTCTCACTCCCACCTCTaGCTGAGTGTAGGTCTACCA +
Preference number: 4 (lower is better)
Translates to: STRQKAKQRLLNRNWLRPSHSHL*LSVGLP
Trigger: TGGTAGACCTACACTCAGCCAGAGGTGGGAGTGAGA...AGGCCTCAGCCAGTTTCTGTTTAACAGTCTCTGCTTTGCCTTCTGCCTGGTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273146.6
CDS-3UTR TCA 90 bp TCTGAGCTGGTTGCTACAGAGGTGGTGGATAGAGTTTTATTATTATATGTAGTTGCGCCAGTTACCCCCTaGGGCTCCATGGGACCAGGG +
Preference number: 4 (lower is better)
Translates to: SELVATEVVDRVLLLYVVAPVTP*GSMGPG
Trigger: CCCTGGTCCCATGGAGCCTCAGGGGGTAACTGGCGC...AACTACATATAATAATAAAACTCTATCCACCACCTCTGTAGCAACCAGCTCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273146.6
CDS-3UTR TCA 90 bp CCTCTGGCTGAGTGTAGGTCTACCAGGCAGAAGGCAAAGCAGAGACTGTTAAACAGGAGCACAACATGCTaGGTACTGAGTCTTGGATGT +
Preference number: 4 (lower is better)
Translates to: PLAECRSTRQKAKQRLLNRSTTC*VLSLGC
Trigger: ACATCCAAGACTCAGTACTCAGCATGTTGTGCTCCT...GTTTAACAGTCTCTGCTTTGCCTTCTGCCTGGTAGACCTACACTCAGCCAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273146.6
CDS-3UTR GCA 90 bp CCAAGAAAATGTGGCCATCAGGATGGATGCTCATTGACTCAGGGCTGTGTGCGGTCTACTCGGGACTTTTaGAGAGTTTGCAAAGTCCCT +
Preference number: 4 (lower is better)
Translates to: PRKCGHQDGCSLTQGCVRSTRDF*RVCKVP
Trigger: AGGGACTTTGCAAACTCTGCAAAAGTCCCGAGTAGA...CCGCACACAGCCCTGAGTCAATGAGCATCCATCCTGATGGCCACATTTTCTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273146.6
CDS-3UTR GCA 90 bp AAGATGAGTGAGCCCAAGAAAATGTGGCCATCAGGATGGATGCTCATTGACTCACCAGATGACAGGCCTTaGTCCACCGTCTGTGTATCG +
Preference number: 4 (lower is better)
Translates to: KMSEPKKMWPSGWMLIDSPDDRP*STVCVS
Trigger: CGATACACAGACGGTGGAGCAAGGCCTGTCATCTGG...TGAGTCAATGAGCATCCATCCTGATGGCCACATTTTCTTGGGCTCACTCATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273146.6
ENST00000430121.3
CDS-3UTR GCA 90 bp CTGTTAAACAGAAACTGGCTGAGGCCTAGAGGAACAGCATCACTTGATAAGGGTAAGCGGTCGTGGACCTaGAACAGGAAGTCGAAGAGC +
Preference number: 4 (lower is better)
Translates to: LLNRNWLRPRGTASLDKGKRSWT*NRKSKS
Trigger: GCTCTTCGACTTCCTGTTGCAGGTCCACGACCGCTT...ACCCTTATCAAGTGATGCTGTTCCTCTAGGCCTCAGCCAGTTTCTGTTTAACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273146.6
CDS-3UTR GCA 90 bp TCCTTGGAAAGAACTCCACCATCCCAGGCAGGTGAAATATCCCGTGACATCCTTCAGGGTGCTGAAGGTTaGCAGCGTTATCGATGTAGA +
Preference number: 4 (lower is better)
Translates to: SLERTPPSQAGEISRDILQGAEG*QRYRCR
Trigger: TCTACATCGATAACGCTGGCAACCTTCAGCACCCTG...AAGGATGTCACGGGATATTTCACCTGCCTGGGATGGTGGAGTTCTTTCCAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273146.6
CDS-3UTR GCA 90 bp GTCCTCAAGATGAGTGAGCCCAAGAAAATGTGGCCATCAGGATGGATGCTCATTAACACTGGGTCCATCTaGAGCGACTTCAGCAGCATG +
Preference number: 4 (lower is better)
Translates to: VLKMSEPKKMWPSGWMLINTGSI*SDFSSM
Trigger: CATGCTGCTGAAGTCGCTGCAGATGGACCCAGTGTT...AATGAGCATCCATCCTGATGGCCACATTTTCTTGGGCTCACTCATCTTGAGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273146.6
ENST00000430121.3
CDS-3UTR GCA 90 bp AAGATGAGTGAGCCCAAGAAAATGTGGCCATCAGGATGGATGCTCATTGACTCAGTCTCAGGTATTGCATaGAGGCGGGCACACATGCCA +
Preference number: 4 (lower is better)
Translates to: KMSEPKKMWPSGWMLIDSVSGIA*RRAHMP
Trigger: TGGCATGTGTGCCCGCCTGCATGCAATACCTGAGAC...TGAGTCAATGAGCATCCATCCTGATGGCCACATTTTCTTGGGCTCACTCATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR CCA 90 bp ACTCTGCATATGCACGTGCATCACACATTTTTACAGTTTCTTGAGCAGCTCACAGGGATACTCCGCGGGTaGGGAATACACGCCGGATCT +
Preference number: 4 (lower is better)
Translates to: TLHMHVHHTFLQFLEQLTGILRG*GIHAGS
Trigger: AGATCCGGCGTGTATTCCCCACCCGCGGAGTATCCC...TGTGAGCTGCTCAAGAAACTGTAAAAATGTGTGATGCACGTGCATATGCAGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR CCA 90 bp ACACACACACACATACACACCGCTAGGGAGTTTGTGGGACTTATGCTTTTTGTCTCACTCTGTGTCTCCTaGATGGGACTGCCATGCTGG +
Preference number: 4 (lower is better)
Translates to: THTHIHTAREFVGLMLFVSLCVS*MGLPCW
Trigger: CCAGCATGGCAGTCCCATCCAGGAGACACAGAGTGA...GACAAAAAGCATAAGTCCCACAAACTCCCTAGCGGTGTGTATGTGTGTGTGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR CCA 90 bp CAGAGACTGTTAAACAGAAACTGGCTGAGGCCTAGAGGAACAGCATCACTTGATGAAGGGCAGCCTCAGTaGAGAAGCCAACCTGTAGCA +
Preference number: 4 (lower is better)
Translates to: QRLLNRNWLRPRGTASLDEGQPQ*RSQPVA
Trigger: TGCTACAGGTTGGCTTCTCCACTGAGGCTGCCCTTC...ATCAAGTGATGCTGTTCCTCTAGGCCTCAGCCAGTTTCTGTTTAACAGTCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273146.6
CDS-3UTR CCA 90 bp ACACACACACACATACACACCGCTAGGGAGTTTGTGGGACTTATGCTTTTTGTCGAAGGGCAGCCTCAGTaGAGAAGCCAACCTGTAGCA +
Preference number: 4 (lower is better)
Translates to: THTHIHTAREFVGLMLFVEGQPQ*RSQPVA
Trigger: TGCTACAGGTTGGCTTCTCCACTGAGGCTGCCCTTC...GACAAAAAGCATAAGTCCCACAAACTCCCTAGCGGTGTGTATGTGTGTGTGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR CCA 90 bp TTGCCATTTTCTAGGATGACAAGTGTCTCACTCCCACCTCTGGCTGAGTGTAGGATGTGGCCATCAGGATaGATGCTCATTGACTCAGGG +
Preference number: 4 (lower is better)
Translates to: LPFSRMTSVSLPPLAECRMWPSG*MLIDSG
Trigger: CCCTGAGTCAATGAGCATCCATCCTGATGGCCACAT...CCTACACTCAGCCAGAGGTGGGAGTGAGACACTTGTCATCCTAGAAAATGGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273146.6
CDS-3UTR TCA 90 bp TTGCCATTTTCTAGGATGACAAGTGTCTCACTCCCACCTCTGGCTGAGTGTAGGGAGTCTTGGATGTCCTaGCAAAGTAATGTCCCTCCT +
Preference number: 4 (lower is better)
Translates to: LPFSRMTSVSLPPLAECRESWMS*QSNVPP
Trigger: AGGAGGGACATTACTTTGTCAGGACATCCAAGACTC...CCTACACTCAGCCAGAGGTGGGAGTGAGACACTTGTCATCCTAGAAAATGGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273146.6
CDS-3UTR TCA 90 bp TTTCTTAAGCCTGAGTCTACTTTCAGCCAGAGCAACTCCAGGCTGCAAGTGCAGGAGTCTTGGATGTCCTaGCAAAGTAATGTCCCTCCT +
Preference number: 4 (lower is better)
Translates to: FLKPESTFSQSNSRLQVQESWMS*QSNVPP
Trigger: AGGAGGGACATTACTTTGTCAGGACATCCAAGACTC...CTGCACTTGCAGCCTGGAGTTGCTCTGGCTGAAAGTAGACTCAGGCTTAAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR TCA 90 bp TTGGAAAGAACTCCACCATCCCAGGCAGGTGAAATATCCCGTGACATCCTTGTGCAACATGCTGAGTACTaGGTCTTGGATGTCCTGACA +
Preference number: 4 (lower is better)
Translates to: LERTPPSQAGEISRDILVQHAEY*VLDVLT
Trigger: TGTCAGGACATCCAAGACTCAGTACTCAGCATGTTG...CACAAGGATGTCACGGGATATTTCACCTGCCTGGGATGGTGGAGTTCTTTCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273146.6
CDS-3UTR TCA 90 bp GCATGTCAGTCTCTCGGTGGTGAGACAGGATTAGATCTGTTTTATTTCAAAGCGTTGTCCTCAGGGTGCTaGAGGTTGCCAGCGTTATCG +
Preference number: 4 (lower is better)
Translates to: ACQSLGGETGLDLFYFKALSSGC*RLPALS
Trigger: CGATAACGCTGGCAACCTTCAGCACCCTGAGGACAA...CGCTTTGAAATAAAACAGATCTAATCCTGTCTCACCACCGAGAGACTGACATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273146.6
CDS-3UTR TCA 90 bp GAAAGAACTCCACCATCCCAGGCAGGTGAAATATCCCGTGACATCCTTGTGCCCCATTTGTCCTCAAGATaGGTGAGCCCAAGAAAATGT +
Preference number: 4 (lower is better)
Translates to: ERTPPSQAGEISRDILVPHLSSR*VSPRKC
Trigger: ACATTTTCTTGGGCTCACTCATCTTGAGGACAAATG...GGGCACAAGGATGTCACGGGATATTTCACCTGCCTGGGATGGTGGAGTTCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273146.6
CDS-3UTR GCA 90 bp GTGGATAGAGTTTTATTATTATATGTAGTTTGGGCATTGTCCACTTGCATGTCACCAGGCTTCCCAGGATaGGCGGCTACTCGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: VDRVLLLYVVWALSTCMSPGFPG*AATRLG
Trigger: CCCCAGCCGAGTAGCCGCGCATCCTGGGAAGCCTGG...TGACATGCAAGTGGACAATGCCCAAACTACATATAATAATAAAACTCTATCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273146.6
CDS-3UTR GCA 90 bp CAGAACATTTTCGAATGTATTTGTTGGTGCAAGGGAATAAATAGCCAGAGCCGAGAAGCCCATGTTTCTTaGCCGCTGCCTCCGGCTGGA +
Preference number: 4 (lower is better)
Translates to: QNIFECICWCKGINSQSREAHVS*PLPPAG
Trigger: TCCAGCCGGAGGCAGCGGGCAAGAAACATGGGCTTC...TCGGCTCTGGCTATTTATTCCCTTGCACCAACAAATACATTCGAAAATGTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR GCA 90 bp CAGAACATTTTCGAATGTATTTGTTGGTGCAAGGGAATAAATAGCCAGAGCCGACTCCCAGCAGATCCCTaGCTTCTGCTGTATGGGGCC +
Preference number: 4 (lower is better)
Translates to: QNIFECICWCKGINSQSRLPADP*LLLYGA
Trigger: GGCCCCATACAGCAGAAGGCAGGGATCTGCTGGGAG...TCGGCTCTGGCTATTTATTCCCTTGCACCAACAAATACATTCGAAAATGTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR GCA 90 bp CATTGTCCACTTGCATGTCAGTCTCTCGGTGGTGAGACAGGATTAGATCTGTTTCAAGGTGGGATCCTCTaGTTGTTGCCCACCAGTCAA +
Preference number: 4 (lower is better)
Translates to: HCPLACQSLGGETGLDLFQGGIL*LLPTSQ
Trigger: TTGACTGGTGGGCAACAAGCAGAGGATCCCACCTTG...AAACAGATCTAATCCTGTCTCACCACCGAGAGACTGACATGCAAGTGGACAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273146.6
CDS-3UTR GCA 90 bp AAGATGAGTGAGCCCAAGAAAATGTGGCCATCAGGATGGATGCTCATTGACTCAAACAGACGGAGCATCTaGACATCGTGGTCTGTCAGC +
Preference number: 4 (lower is better)
Translates to: KMSEPKKMWPSGWMLIDSNRRSI*TSWSVS
Trigger: GCTGACAGACCACGATGTGCAGATGCTCCGTCTGTT...TGAGTCAATGAGCATCCATCCTGATGGCCACATTTTCTTGGGCTCACTCATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273146.6
ENST00000430121.3
CDS-3UTR GCA 90 bp ATGAAGATTGTACCTTTATTAGGTTGGTCTCAGGTATTGCATGCAGGCGGGCACAACAGACGGAGCATCTaGACATCGTGGTCTGTCAGC +
Preference number: 4 (lower is better)
Translates to: MKIVPLLGWSQVLHAGGHNRRSI*TSWSVS
Trigger: GCTGACAGACCACGATGTGCAGATGCTCCGTCTGTT...GTGCCCGCCTGCATGCAATACCTGAGACCAACCTAATAAAGGTACAATCTTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR GCA 90 bp TGGGAGAAATGTAAATTGACACCACCATTTCAGAGAGCAATTTGGCAGTTTCTCCACCACCTCCCCCTGTaGCAACAGACGGAGCATCTG +
Preference number: 4 (lower is better)
Translates to: WEKCKLTPPFQRAIWQFLHHLPL*QQTEHL
Trigger: CAGATGCTCCGTCTGTTGGCACAGGGGGAGGTGGTG...GAGAAACTGCCAAATTGCTCTCTGAAATGGTGGTGTCAATTTACATTTCTCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR GCA 90 bp GACAGGATTAGATCTGTTTTATTTCAAAGCGGCTGGTTAAGTCACAAAGTAGAAGGGTCGCTCAGGTGCTaGACATCGGGTGCCCACCAG +
Preference number: 4 (lower is better)
Translates to: DRIRSVLFQSGWLSHKVEGSLRC*TSGAHQ
Trigger: CTGGTGGGCACCCGATGTGCAGCACCTGAGCGACCC...TTCTACTTTGTGACTTAACCAGCCGCTTTGAAATAAAACAGATCTAATCCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273146.6
CDS-3UTR GCA 90 bp CTGAGTCTACTTTCAGCCAGAGCAACTCCAGGCTGCAAGTGCAGTTCTATGAAGAAGAGTGTGAGGTTGTaGTTTTGGATGTGTCCCAGC +
Preference number: 4 (lower is better)
Translates to: LSLLSARATPGCKCSSMKKSVRL*FWMCPS
Trigger: GCTGGGACACATCCAAAAGCACAACCTCACACTCTT...CTTCATAGAACTGCACTTGCAGCCTGGAGTTGCTCTGGCTGAAAGTAGACTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR GCA 90 bp AAGATGAGTGAGCCCAAGAAAATGTGGCCATCAGGATGGATGCTCATTGACTCAGTTGGTCTCAGGTATTaGATGCAGGCGGGCACACAT +
Preference number: 4 (lower is better)
Translates to: KMSEPKKMWPSGWMLIDSVGLRY*MQAGTH
Trigger: ATGTGTGCCCGCCTGCATGCAATACCTGAGACCAAC...TGAGTCAATGAGCATCCATCCTGATGGCCACATTTTCTTGGGCTCACTCATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR CCA 90 bp CATTGTCCACTTGCATGTCAGTCTCTCGGTGGTGAGACAGGATTAGATCTGTTTTCCACTCTTGCTCTATaGCCTTGCTCCTCAGCACAG +
Preference number: 4 (lower is better)
Translates to: HCPLACQSLGGETGLDLFSTLAL*PCSSAQ
Trigger: CTGTGCTGAGGAGCAAGGCCATAGAGCAAGAGTGGA...AAACAGATCTAATCCTGTCTCACCACCGAGAGACTGACATGCAAGTGGACAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273146.6
CDS-3UTR CCA 90 bp AGTTTTATTATTATATGTAGTTTGGGCATTGTCCACTTGCATGTCAGTCTCTCGCATGGGCGGGGACCCTaGCTTTGTCCACCACCTCCC +
Preference number: 4 (lower is better)
Translates to: SFIIICSLGIVHLHVSLSHGRGP*LCPPPP
Trigger: GGGAGGTGGTGGACAAAGCCAGGGTCCCCGCCCATG...CGAGAGACTGACATGCAAGTGGACAATGCCCAAACTACATATAATAATAAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273146.6
CDS-3UTR CCA 90 bp GCATGTCAGTCTCTCGGTGGTGAGACAGGATTAGATCTGTTTTATTTCAAAGCGGTTCTGATCCTCATCTaGGTCGCTCAGGTGCTGCAC +
Preference number: 4 (lower is better)
Translates to: ACQSLGGETGLDLFYFKAVLILI*VAQVLH
Trigger: GTGCAGCACCTGAGCGACCCAGATGAGGATCAGAAC...CGCTTTGAAATAAAACAGATCTAATCCTGTCTCACCACCGAGAGACTGACATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273146.6
CDS-3UTR CCA 90 bp AAGATGAGTGAGCCCAAGAAAATGTGGCCATCAGGATGGATGCTCATTGACTCAGCTTTCCCAGAACACTaGGTCCATCTGCAGCGACTT +
Preference number: 4 (lower is better)
Translates to: KMSEPKKMWPSGWMLIDSAFPEH*VHLQRL
Trigger: AAGTCGCTGCAGATGGACCCAGTGTTCTGGGAAAGC...TGAGTCAATGAGCATCCATCCTGATGGCCACATTTTCTTGGGCTCACTCATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273146.6
ENST00000430121.3
3UTR CAA 72 bp ATGAAGATTGTACCTTTATTAGGTTGGTCTCAGGTATaGCATGCAGGCGGGCACACATGCCACCCACACCTA +
Preference number: 4 (lower is better)
Translates to: MKIVPLLGWSQV*HAGGHTCHPHL
Trigger: TAGGTGTGGGTGGCATGTGTGCCCGCCTGCATGCAATACCTGAGACCAACCTAATAAAGGTACAATCTTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR TCA 90 bp AAGATGAGTGAGCCCAAGAAAATGTGGCCATCAGGATGGATGCTCATTGACTCAAGCATCACACCATACTaGCCCTTGCAGCTTCTCAAC +
Preference number: 4 (lower is better)
Translates to: KMSEPKKMWPSGWMLIDSSITPY*PLQLLN
Trigger: GTTGAGAAGCTGCAAGGGTCAGTATGGTGTGATGCT...TGAGTCAATGAGCATCCATCCTGATGGCCACATTTTCTTGGGCTCACTCATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273146.6
ENST00000430121.3
CDS-3UTR TCA 90 bp TTGAGCAGCTCACAGAACATTTTCGAATGTATTTGTTGGTGCAAGGGAATAAATTGTGCCAGCAGGGCCTaGTACTGCAGCCAGCCCAAG +
Preference number: 4 (lower is better)
Translates to: LSSSQNIFECICWCKGINCASRA*YCSQPK
Trigger: CTTGGGCTGGCTGCAGTATCAGGCCCTGCTGGCACA...ATTTATTCCCTTGCACCAACAAATACATTCGAAAATGTTCTGTGAGCTGCTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR TCA 90 bp TTTCTTAAGCCTGAGTCTACTTTCAGCCAGAGCAACTCCAGGCTGCAAGTGCAGTTTCTCTCAGAATACTaGATGCCCATACCCTTTGCC +
Preference number: 4 (lower is better)
Translates to: FLKPESTFSQSNSRLQVQFLSEY*MPIPFA
Trigger: GGCAAAGGGTATGGGCATTCAGTATTCTGAGAGAAA...CTGCACTTGCAGCCTGGAGTTGCTCTGGCTGAAAGTAGACTCAGGCTTAAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR GCA 90 bp GACAGGATTAGATCTGTTTTATTTCAAAGCGGCTGGTTAAGTCACAAAGTAGAAGCAGCCAAGTGGCCCTaGGCCAACTCTCGGGAGATC +
Preference number: 4 (lower is better)
Translates to: DRIRSVLFQSGWLSHKVEAAKWP*ANSREI
Trigger: GATCTCCCGAGAGTTGGCGCAGGGCCACTTGGCTGC...TTCTACTTTGTGACTTAACCAGCCGCTTTGAAATAAAACAGATCTAATCCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273146.6
CDS-3UTR GCA 90 bp ACTCTGCATATGCACGTGCATCACACATTTTTACAGTTTCTTGAGCAGCTCACAGGATCCTCTGCTTGTTaGCCACCAGTCAAGGCTCTG +
Preference number: 4 (lower is better)
Translates to: TLHMHVHHTFLQFLEQLTGSSAC*PPVKAL
Trigger: CAGAGCCTTGACTGGTGGGCAACAAGCAGAGGATCC...TGTGAGCTGCTCAAGAAACTGTAAAAATGTGTGATGCACGTGCATATGCAGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR GCA 90 bp CTGTTAAACAGAAACTGGCTGAGGCCTAGAGGAACAGCATCACTTGATAAGGGTCACCATACTGACCCTTaGAGCTTCTCAACAGAGCCA +
Preference number: 4 (lower is better)
Translates to: LLNRNWLRPRGTASLDKGHHTDP*SFSTEP
Trigger: TGGCTCTGTTGAGAAGCTGCAAGGGTCAGTATGGTG...ACCCTTATCAAGTGATGCTGTTCCTCTAGGCCTCAGCCAGTTTCTGTTTAACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273146.6
CDS-3UTR GCA 90 bp TCAGCCAGAGCAACTCCAGGCTGCAAGTGCAGTTCTATGAAGATTGTACCTTTACAGGGTGCTGAAGGTTaGCAGCGTTATCGATGTAGA +
Preference number: 4 (lower is better)
Translates to: SARATPGCKCSSMKIVPLQGAEG*QRYRCR
Trigger: TCTACATCGATAACGCTGGCAACCTTCAGCACCCTG...TAAAGGTACAATCTTCATAGAACTGCACTTGCAGCCTGGAGTTGCTCTGGCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR GCA 90 bp GACAGGATTAGATCTGTTTTATTTCAAAGCGGCTGGTTAAGTCACAAAGTAGAAAGCACCTGTCCTCGCTaGTCCAGGGTCTGGAGGACC +
Preference number: 4 (lower is better)
Translates to: DRIRSVLFQSGWLSHKVESTCPR*SRVWRT
Trigger: GGTCCTCCAGACCCTGGAGCAGCGAGGACAGGTGCT...TTCTACTTTGTGACTTAACCAGCCGCTTTGAAATAAAACAGATCTAATCCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273146.6
CDS-3UTR CCA 90 bp TTGAGCAGCTCACAGAACATTTTCGAATGTATTTGTTGGTGCAAGGGAATAAATCCTGAGGTCCCCTCCTaGGGACTCCCTGCTTCTGTC +
Preference number: 4 (lower is better)
Translates to: LSSSQNIFECICWCKGINPEVPS*GLPASV
Trigger: GACAGAAGCAGGGAGTCCCCAGGAGGGGACCTCAGG...ATTTATTCCCTTGCACCAACAAATACATTCGAAAATGTTCTGTGAGCTGCTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR CCA 90 bp CTTTTCCCATTTGTCCTCAAGATGAGTGAGCCCAAGAAAATGTGGCCATCAGGACAGGTCTTTGGTTCCTaGATCTCCAACCTCATCCTC +
Preference number: 4 (lower is better)
Translates to: LFPFVLKMSEPKKMWPSGQVFGS*ISNLIL
Trigger: GAGGATGAGGTTGGAGATCCAGGAACCAAAGACCTG...TCCTGATGGCCACATTTTCTTGGGCTCACTCATCTTGAGGACAAATGGGAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273146.6
ENST00000430121.3
CDS-3UTR CCA 90 bp CAGAACATTTTCGAATGTATTTGTTGGTGCAAGGGAATAAATAGCCAGAGCCGACTCCTGAGGCCAAGGTaGGATCCTCTGCTTGTTGCC +
Preference number: 4 (lower is better)
Translates to: QNIFECICWCKGINSQSRLLRPR*DPLLVA
Trigger: GGCAACAAGCAGAGGATCCCACCTTGGCCTCAGGAG...TCGGCTCTGGCTATTTATTCCCTTGCACCAACAAATACATTCGAAAATGTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR CCA 90 bp TCTGAGCTGGTTGCTACAGAGGTGGTGGATAGAGTTTTATTATTATATGTAGTTGTGGTCTGTCAGCCATaGGGGAGCCTGCCCACCAGT +
Preference number: 4 (lower is better)
Translates to: SELVATEVVDRVLLLYVVVVCQP*GSLPTS
Trigger: ACTGGTGGGCAGGCTCCCCCATGGCTGACAGACCAC...AACTACATATAATAATAAAACTCTATCCACCACCTCTGTAGCAACCAGCTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273146.6
CDS-3UTR CCA 90 bp CAGAACATTTTCGAATGTATTTGTTGGTGCAAGGGAATAAATAGCCAGAGCCGAGTAGACCAGGTGAGATaGATCGCTGCTCCGGACCAG +
Preference number: 4 (lower is better)
Translates to: QNIFECICWCKGINSQSRVDQVR*IAAPDQ
Trigger: CTGGTCCGGAGCAGCGATCCATCTCACCTGGTCTAC...TCGGCTCTGGCTATTTATTCCCTTGCACCAACAAATACATTCGAAAATGTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR CCA 90 bp TCTGAGCTGGTTGCTACAGAGGTGGTGGATAGAGTTTTATTATTATATGTAGTTACCTGCTTCAGCCCCTaGGCTCCGCCTTGGCTTTCC +
Preference number: 4 (lower is better)
Translates to: SELVATEVVDRVLLLYVVTCFSP*APPWLS
Trigger: GGAAAGCCAAGGCGGAGCCCAGGGGCTGAAGCAGGT...AACTACATATAATAATAAAACTCTATCCACCACCTCTGTAGCAACCAGCTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273146.6
CDS-3UTR CCA 90 bp ACACACACACACATACACACCGCTAGGGAGTTTGTGGGACTTATGCTTTTTGTCATGTGGCCATCAGGATaGATGCTCATTGACTCAGGG +
Preference number: 4 (lower is better)
Translates to: THTHIHTAREFVGLMLFVMWPSG*MLIDSG
Trigger: CCCTGAGTCAATGAGCATCCATCCTGATGGCCACAT...GACAAAAAGCATAAGTCCCACAAACTCCCTAGCGGTGTGTATGTGTGTGTGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR CCA 90 bp AAGATGAGTGAGCCCAAGAAAATGTGGCCATCAGGATGGATGCTCATTGACTCAGAGCCCAAGAAAATGTaGCCATCAGGATGGATGCTC +
Preference number: 4 (lower is better)
Translates to: KMSEPKKMWPSGWMLIDSEPKKM*PSGWML
Trigger: GAGCATCCATCCTGATGGCCACATTTTCTTGGGCTC...TGAGTCAATGAGCATCCATCCTGATGGCCACATTTTCTTGGGCTCACTCATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273146.6
ENST00000430121.3
CDS-3UTR CCA 90 bp CTCAGGTATTGCATGCAGGCGGGCACACATGCCACCCACACCTACACACCTCTATTCGAATGTATTTGTTaGTGCAAGGGAATAAATAGC +
Preference number: 4 (lower is better)
Translates to: LRYCMQAGTHATHTYTPLFECIC*CKGINS
Trigger: GCTATTTATTCCCTTGCACCAACAAATACATTCGAA...TAGAGGTGTGTAGGTGTGGGTGGCATGTGTGCCCGCCTGCATGCAATACCTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR CCA 90 bp CCAAGAAAATGTGGCCATCAGGATGGATGCTCATTGACTCAGGGCTGTGTGCGGAGTCTCCTACCCTCTTaGGAGAAATGTAAATTGACA +
Preference number: 4 (lower is better)
Translates to: PRKCGHQDGCSLTQGCVRSLLPS*EKCKLT
Trigger: TGTCAATTTACATTTCTCCCAAGAGGGTAGGAGACT...CCGCACACAGCCCTGAGTCAATGAGCATCCATCCTGATGGCCACATTTTCTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR TCA 90 bp AAGATGAGTGAGCCCAAGAAAATGTGGCCATCAGGATGGATGCTCATTGACTCAAGGAGCACAACATGCTaGGTACTGAGTCTTGGATGT +
Preference number: 4 (lower is better)
Translates to: KMSEPKKMWPSGWMLIDSRSTTC*VLSLGC
Trigger: ACATCCAAGACTCAGTACTCAGCATGTTGTGCTCCT...TGAGTCAATGAGCATCCATCCTGATGGCCACATTTTCTTGGGCTCACTCATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273146.6
ENST00000430121.3
CDS-3UTR TCA 90 bp GTGGATAGAGTTTTATTATTATATGTAGTTTGGGCATTGTCCACTTGCATGTCATGTGCCAGCAGGGCCTaGTACTGCAGCCAGCCCAAG +
Preference number: 4 (lower is better)
Translates to: VDRVLLLYVVWALSTCMSCASRA*YCSQPK
Trigger: CTTGGGCTGGCTGCAGTATCAGGCCCTGCTGGCACA...TGACATGCAAGTGGACAATGCCCAAACTACATATAATAATAAAACTCTATCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273146.6
CDS-3UTR TCA 90 bp CTGTTAAACAGAAACTGGCTGAGGCCTAGAGGAACAGCATCACTTGATAAGGGTTGCCATTTTCTAGGATaGCAAGTGTCTCACTCCCAC +
Preference number: 4 (lower is better)
Translates to: LLNRNWLRPRGTASLDKGCHFLG*QVSHSH
Trigger: GTGGGAGTGAGACACTTGTCATCCTAGAAAATGGCA...ACCCTTATCAAGTGATGCTGTTCCTCTAGGCCTCAGCCAGTTTCTGTTTAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273146.6
CDS-3UTR TCA 90 bp TTTCTTAAGCCTGAGTCTACTTTCAGCCAGAGCAACTCCAGGCTGCAAGTGCAGAAAAACCCAAAAGTCTaGGAATGCCAAGTGTTGGTG +
Preference number: 4 (lower is better)
Translates to: FLKPESTFSQSNSRLQVQKNPKV*ECQVLV
Trigger: CACCAACACTTGGCATTCTCAGACTTTTGGGTTTTT...CTGCACTTGCAGCCTGGAGTTGCTCTGGCTGAAAGTAGACTCAGGCTTAAGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR GCA 90 bp TGGGAGAAATGTAAATTGACACCACCATTTCAGAGAGCAATTTGGCAGTTTCTCCAGATCCCTGCCTTCTaGTGTATGGGGCCAGAGTGT +
Preference number: 4 (lower is better)
Translates to: WEKCKLTPPFQRAIWQFLQIPAF*CMGPEC
Trigger: ACACTCTGGCCCCATACAGCAGAAGGCAGGGATCTG...GAGAAACTGCCAAATTGCTCTCTGAAATGGTGGTGTCAATTTACATTTCTCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR GCA 90 bp TCTGAGCTGGTTGCTACAGAGGTGGTGGATAGAGTTTTATTATTATATGTAGTTCTCCCAGCAGATCCCTaGCTTCTGCTGTATGGGGCC +
Preference number: 4 (lower is better)
Translates to: SELVATEVVDRVLLLYVVLPADP*LLLYGA
Trigger: GGCCCCATACAGCAGAAGGCAGGGATCTGCTGGGAG...AACTACATATAATAATAAAACTCTATCCACCACCTCTGTAGCAACCAGCTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273146.6
CDS-3UTR GCA 90 bp ACTCTGCATATGCACGTGCATCACACATTTTTACAGTTTCTTGAGCAGCTCACAGGCCATCAGGATGGATaGTCATTGACTCAGGGCTGT +
Preference number: 4 (lower is better)
Translates to: TLHMHVHHTFLQFLEQLTGHQDG*SLTQGC
Trigger: ACAGCCCTGAGTCAATGAGCATCCATCCTGATGGCC...TGTGAGCTGCTCAAGAAACTGTAAAAATGTGTGATGCACGTGCATATGCAGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR GCA 90 bp CTGAGTCTACTTTCAGCCAGAGCAACTCCAGGCTGCAAGTGCAGTTCTATGAAGACTCCAGGCTGCAAGTaGAGTTCTATGAAGATTGTA +
Preference number: 4 (lower is better)
Translates to: LSLLSARATPGCKCSSMKTPGCK*SSMKIV
Trigger: TACAATCTTCATAGAACTGCACTTGCAGCCTGGAGT...CTTCATAGAACTGCACTTGCAGCCTGGAGTTGCTCTGGCTGAAAGTAGACTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR GCA 90 bp TCAGCCAGAGCAACTCCAGGCTGCAAGTGCAGTTCTATGAAGATTGTACCTTTAAGAGCAACTCCAGGCTaGAAGTGCAGTTCTATGAAG +
Preference number: 4 (lower is better)
Translates to: SARATPGCKCSSMKIVPLRATPG*KCSSMK
Trigger: CTTCATAGAACTGCACTTGCAGCCTGGAGTTGCTCT...TAAAGGTACAATCTTCATAGAACTGCACTTGCAGCCTGGAGTTGCTCTGGCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR CCA 90 bp GACAGGATTAGATCTGTTTTATTTCAAAGCGGCTGGTTAAGTCACAAAGTAGAAGGGATACTCCGCGGGTaGGGAATACACGCCGGATCT +
Preference number: 4 (lower is better)
Translates to: DRIRSVLFQSGWLSHKVEGILRG*GIHAGS
Trigger: AGATCCGGCGTGTATTCCCCACCCGCGGAGTATCCC...TTCTACTTTGTGACTTAACCAGCCGCTTTGAAATAAAACAGATCTAATCCTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273146.6
CDS-3UTR CCA 90 bp TGGGAGAAATGTAAATTGACACCACCATTTCAGAGAGCAATTTGGCAGTTTCTCGTTCTGATCCTCATCTaGGTCGCTCAGGTGCTGCAC +
Preference number: 4 (lower is better)
Translates to: WEKCKLTPPFQRAIWQFLVLILI*VAQVLH
Trigger: GTGCAGCACCTGAGCGACCCAGATGAGGATCAGAAC...GAGAAACTGCCAAATTGCTCTCTGAAATGGTGGTGTCAATTTACATTTCTCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR TCA 90 bp GTCCTCAAGATGAGTGAGCCCAAGAAAATGTGGCCATCAGGATGGATGCTCATTAGCCTCATCCTAATGTaGGAGCTCCACATTATGTTT +
Preference number: 4 (lower is better)
Translates to: VLKMSEPKKMWPSGWMLISLILM*ELHIMF
Trigger: AAACATAATGTGGAGCTCTCACATTAGGATGAGGCT...AATGAGCATCCATCCTGATGGCCACATTTTCTTGGGCTCACTCATCTTGAGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273146.6
CDS-3UTR TCA 90 bp ATTGTACCTTTATTAGGTTGGTCTCAGGTATTGCATGCAGGCGGGCACACATGCGGGAGAAATGTAAATTaGCACCACCATTTCAGAGAG +
Preference number: 4 (lower is better)
Translates to: IVPLLGWSQVLHAGGHTCGRNVN*HHHFRE
Trigger: CTCTCTGAAATGGTGGTGTCAATTTACATTTCTCCC...GCATGTGTGCCCGCCTGCATGCAATACCTGAGACCAACCTAATAAAGGTACAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR GCA 90 bp CAGAACATTTTCGAATGTATTTGTTGGTGCAAGGGAATAAATAGCCAGAGCCGACTTGCTCTATGGCCTTaGTCCTCAGCACAGACCAAG +
Preference number: 4 (lower is better)
Translates to: QNIFECICWCKGINSQSRLALWP*SSAQTK
Trigger: CTTGGTCTGTGCTGAGGAGCAAGGCCATAGAGCAAG...TCGGCTCTGGCTATTTATTCCCTTGCACCAACAAATACATTCGAAAATGTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR GCA 90 bp ACTCTGCATATGCACGTGCATCACACATTTTTACAGTTTCTTGAGCAGCTCACACACCATACTGACCCTTaGAGCTTCTCAACAGAGCCA +
Preference number: 4 (lower is better)
Translates to: TLHMHVHHTFLQFLEQLTHHTDP*SFSTEP
Trigger: TGGCTCTGTTGAGAAGCTGCAAGGGTCAGTATGGTG...TGTGAGCTGCTCAAGAAACTGTAAAAATGTGTGATGCACGTGCATATGCAGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR GCA 90 bp GTGGATAGAGTTTTATTATTATATGTAGTTTGGGCATTGTCCACTTGCATGTCAGAAGAGCGCCAGGCGTaGCCACTCGGTATGGTGGAT +
Preference number: 4 (lower is better)
Translates to: VDRVLLLYVVWALSTCMSEERQA*PLGMVD
Trigger: ATCCACCATACCGAGTGGGCACGCCTGGCGCTCTTC...TGACATGCAAGTGGACAATGCCCAAACTACATATAATAATAAAACTCTATCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273146.6
CDS-3UTR GCA 90 bp TTGAGCAGCTCACAGAACATTTTCGAATGTATTTGTTGGTGCAAGGGAATAAATGGTGAGATGGATCGCTaGTCCGGACCAGGATGTGGA +
Preference number: 4 (lower is better)
Translates to: LSSSQNIFECICWCKGINGEMDR*SGPGCG
Trigger: TCCACATCCTGGTCCGGAGCAGCGATCCATCTCACC...ATTTATTCCCTTGCACCAACAAATACATTCGAAAATGTTCTGTGAGCTGCTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR GCA 90 bp CACCTCTACACACACACAAAGTTCTCCCACTCTGCATATGCACGTGCATCACACAATATGACACATCCCTaGCTTGGAATTTCATGCAGT +
Preference number: 4 (lower is better)
Translates to: HLYTHTKFSHSAYARASHNMTHP*LGISCS
Trigger: ACTGCATGAAATTCCAAGGCAGGGATGTGTCATATT...GTGTGATGCACGTGCATATGCAGAGTGGGAGAACTTTGTGTGTGTGTAGAGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR GCA 90 bp AAGATGAGTGAGCCCAAGAAAATGTGGCCATCAGGATGGATGCTCATTGACTCACCTCGCAGAAATACTTaGACGCCATGCAATCATGTT +
Preference number: 4 (lower is better)
Translates to: KMSEPKKMWPSGWMLIDSPRRNT*TPCNHV
Trigger: AACATGATTGCATGGCGTGCAAGTATTTCTGCGAGG...TGAGTCAATGAGCATCCATCCTGATGGCCACATTTTCTTGGGCTCACTCATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR CCA 90 bp CAGAACATTTTCGAATGTATTTGTTGGTGCAAGGGAATAAATAGCCAGAGCCGATCCACTCTTGCTCTATaGCCTTGCTCCTCAGCACAG +
Preference number: 4 (lower is better)
Translates to: QNIFECICWCKGINSQSRSTLAL*PCSSAQ
Trigger: CTGTGCTGAGGAGCAAGGCCATAGAGCAAGAGTGGA...TCGGCTCTGGCTATTTATTCCCTTGCACCAACAAATACATTCGAAAATGTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR CCA 90 bp ACTCTGCATATGCACGTGCATCACACATTTTTACAGTTTCTTGAGCAGCTCACACAGGTCTTTGGTTCCTaGATCTCCAACCTCATCCTC +
Preference number: 4 (lower is better)
Translates to: TLHMHVHHTFLQFLEQLTQVFGS*ISNLIL
Trigger: GAGGATGAGGTTGGAGATCCAGGAACCAAAGACCTG...TGTGAGCTGCTCAAGAAACTGTAAAAATGTGTGATGCACGTGCATATGCAGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR CCA 90 bp AGTTTTATTATTATATGTAGTTTGGGCATTGTCCACTTGCATGTCAGTCTCTCGCTGCCTTCTGCTGTATaGGGCCAGAGTGTCAGCCCA +
Preference number: 4 (lower is better)
Translates to: SFIIICSLGIVHLHVSLSLPSAV*GQSVSP
Trigger: TGGGCTGACACTCTGGCCCCATACAGCAGAAGGCAG...CGAGAGACTGACATGCAAGTGGACAATGCCCAAACTACATATAATAATAAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273146.6
CDS-3UTR CCA 90 bp TCTGAGCTGGTTGCTACAGAGGTGGTGGATAGAGTTTTATTATTATATGTAGTTAGCTCGGCTGGGTTCTaGCATTTCTCTCGGAGCCTC +
Preference number: 4 (lower is better)
Translates to: SELVATEVVDRVLLLYVVSSAGF*HFSRSL
Trigger: GAGGCTCCGAGAGAAATGCCAGAACCCAGCCGAGCT...AACTACATATAATAATAAAACTCTATCCACCACCTCTGTAGCAACCAGCTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273146.6
CDS-3UTR CCA 90 bp AGTTTTATTATTATATGTAGTTTGGGCATTGTCCACTTGCATGTCAGTCTCTCGGCTGTGTGCGGCTTATaGGTCCTCGTCCCTGAAGAG +
Preference number: 4 (lower is better)
Translates to: SFIIICSLGIVHLHVSLSAVCGL*VLVPEE
Trigger: CTCTTCAGGGACGAGGACCCATAAGCCGCACACAGC...CGAGAGACTGACATGCAAGTGGACAATGCCCAAACTACATATAATAATAAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273146.6
CDS-3UTR CCA 90 bp ACTCTGCATATGCACGTGCATCACACATTTTTACAGTTTCTTGAGCAGCTCACAGAGCCCAAGAAAATGTaGCCATCAGGATGGATGCTC +
Preference number: 4 (lower is better)
Translates to: TLHMHVHHTFLQFLEQLTEPKKM*PSGWML
Trigger: GAGCATCCATCCTGATGGCCACATTTTCTTGGGCTC...TGTGAGCTGCTCAAGAAACTGTAAAAATGTGTGATGCACGTGCATATGCAGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR CCA 90 bp CAGAGACTGTTAAACAGAAACTGGCTGAGGCCTAGAGGAACAGCATCACTTGATCTGTTAAACAGAAACTaGCTGAGGCCTAGAGGAACA +
Preference number: 4 (lower is better)
Translates to: QRLLNRNWLRPRGTASLDLLNRN*LRPRGT
Trigger: TGTTCCTCTAGGCCTCAGCCAGTTTCTGTTTAACAG...ATCAAGTGATGCTGTTCCTCTAGGCCTCAGCCAGTTTCTGTTTAACAGTCTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273146.6
CDS-3UTR CCA 90 bp AAGATGAGTGAGCCCAAGAAAATGTGGCCATCAGGATGGATGCTCATTGACTCACCGCTAGGGAGTTTGTaGGACTTATGCTTTTTGTCA +
Preference number: 4 (lower is better)
Translates to: KMSEPKKMWPSGWMLIDSPLGSL*DLCFLS
Trigger: TGACAAAAAGCATAAGTCCCACAAACTCCCTAGCGG...TGAGTCAATGAGCATCCATCCTGATGGCCACATTTTCTTGGGCTCACTCATCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR GCA 90 bp GACAGGATTAGATCTGTTTTATTTCAAAGCGGCTGGTTAAGTCACAAAGTAGAACAGATCCCTGCCTTCTaGTGTATGGGGCCAGAGTGT +
Preference number: 4 (lower is better)
Translates to: DRIRSVLFQSGWLSHKVEQIPAF*CMGPEC
Trigger: ACACTCTGGCCCCATACAGCAGAAGGCAGGGATCTG...TTCTACTTTGTGACTTAACCAGCCGCTTTGAAATAAAACAGATCTAATCCTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273146.6
CDS-3UTR GCA 90 bp GACAGGATTAGATCTGTTTTATTTCAAAGCGGCTGGTTAAGTCACAAAGTAGAACCAGATGACAGGCCTTaGTCCACCGTCTGTGTATCG +
Preference number: 4 (lower is better)
Translates to: DRIRSVLFQSGWLSHKVEPDDRP*STVCVS
Trigger: CGATACACAGACGGTGGAGCAAGGCCTGTCATCTGG...TTCTACTTTGTGACTTAACCAGCCGCTTTGAAATAAAACAGATCTAATCCTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273146.6
CDS-3UTR GCA 90 bp TTGAGCAGCTCACAGAACATTTTCGAATGTATTTGTTGGTGCAAGGGAATAAATAAGCGGTCGTGGACCTaGAACAGGAAGTCGAAGAGC +
Preference number: 4 (lower is better)
Translates to: LSSSQNIFECICWCKGINKRSWT*NRKSKS
Trigger: GCTCTTCGACTTCCTGTTGCAGGTCCACGACCGCTT...ATTTATTCCCTTGCACCAACAAATACATTCGAAAATGTTCTGTGAGCTGCTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR CCA 90 bp TTGAGCAGCTCACAGAACATTTTCGAATGTATTTGTTGGTGCAAGGGAATAAATAGCATCTGCACATCGTaGTCTGTCAGCCATGGGGGA +
Preference number: 4 (lower is better)
Translates to: LSSSQNIFECICWCKGINSICTS*SVSHGG
Trigger: TCCCCCATGGCTGACAGACCACGATGTGCAGATGCT...ATTTATTCCCTTGCACCAACAAATACATTCGAAAATGTTCTGTGAGCTGCTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR TCA 90 bp ATTGTACCTTTATTAGGTTGGTCTCAGGTATTGCATGCAGGCGGGCACACATGCCAGCAGAGAAAAGATTaGTCACACTTATTAGAGTCA +
Preference number: 4 (lower is better)
Translates to: IVPLLGWSQVLHAGGHTCQQRKD*SHLLES
Trigger: TGACTCTAATAAGTGTGATCAATCTTTTCTCTGCTG...GCATGTGTGCCCGCCTGCATGCAATACCTGAGACCAACCTAATAAAGGTACAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR GCA 90 bp AGTTTTATTATTATATGTAGTTTGGGCATTGTCCACTTGCATGTCAGTCTCTCGGCTTCTGTCCACTCTTaGTCTATGGCCTTGCTCCTC +
Preference number: 4 (lower is better)
Translates to: SFIIICSLGIVHLHVSLSASVHS*SMALLL
Trigger: GAGGAGCAAGGCCATAGAGCAAGAGTGGACAGAAGC...CGAGAGACTGACATGCAAGTGGACAATGCCCAAACTACATATAATAATAAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273146.6
CDS-3UTR GCA 90 bp TTGAGCAGCTCACAGAACATTTTCGAATGTATTTGTTGGTGCAAGGGAATAAATCAAGGTGGGATCCTCTaGTTGTTGCCCACCAGTCAA +
Preference number: 4 (lower is better)
Translates to: LSSSQNIFECICWCKGINQGGIL*LLPTSQ
Trigger: TTGACTGGTGGGCAACAAGCAGAGGATCCCACCTTG...ATTTATTCCCTTGCACCAACAAATACATTCGAAAATGTTCTGTGAGCTGCTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR GCA 90 bp GACAGGATTAGATCTGTTTTATTTCAAAGCGGCTGGTTAAGTCACAAAGTAGAAGGCCATCAGGATGGATaGTCATTGACTCAGGGCTGT +
Preference number: 4 (lower is better)
Translates to: DRIRSVLFQSGWLSHKVEGHQDG*SLTQGC
Trigger: ACAGCCCTGAGTCAATGAGCATCCATCCTGATGGCC...TTCTACTTTGTGACTTAACCAGCCGCTTTGAAATAAAACAGATCTAATCCTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273146.6
CDS-3UTR CCA 90 bp GTGGATAGAGTTTTATTATTATATGTAGTTTGGGCATTGTCCACTTGCATGTCAGGTGGCCCAGGTCTTTaGTTCCTGGATCTCCAACCT +
Preference number: 4 (lower is better)
Translates to: VDRVLLLYVVWALSTCMSGGPGL*FLDLQP
Trigger: AGGTTGGAGATCCAGGAACCAAAGACCTGGGCCACC...TGACATGCAAGTGGACAATGCCCAAACTACATATAATAATAAAACTCTATCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273146.6
CDS-3UTR CCA 90 bp GACAGGATTAGATCTGTTTTATTTCAAAGCGGCTGGTTAAGTCACAAAGTAGAAGTTGGTTCTCTGAGCTaGTTGCTACAGAGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: DRIRSVLFQSGWLSHKVEVGSLS*LLQRWW
Trigger: CCACCACCTCTGTAGCAACCAGCTCAGAGAACCAAC...TTCTACTTTGTGACTTAACCAGCCGCTTTGAAATAAAACAGATCTAATCCTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273146.6
CDS-3UTR CCA 90 bp CAGAACATTTTCGAATGTATTTGTTGGTGCAAGGGAATAAATAGCCAGAGCCGAGACACATCCCTGCCTTaGAATTTCATGCAGTCACCA +
Preference number: 4 (lower is better)
Translates to: QNIFECICWCKGINSQSRDTSLP*NFMQSP
Trigger: TGGTGACTGCATGAAATTCCAAGGCAGGGATGTGTC...TCGGCTCTGGCTATTTATTCCCTTGCACCAACAAATACATTCGAAAATGTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR CCA 90 bp ATTGTACCTTTATTAGGTTGGTCTCAGGTATTGCATGCAGGCGGGCACACATGCTTTCAGAGAGCAATTTaGCAGTTTCTCTCAGAATAC +
Preference number: 4 (lower is better)
Translates to: IVPLLGWSQVLHAGGHTCFQRAI*QFLSEY
Trigger: GTATTCTGAGAGAAACTGCCAAATTGCTCTCTGAAA...GCATGTGTGCCCGCCTGCATGCAATACCTGAGACCAACCTAATAAAGGTACAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR CCA 90 bp TTTCTTAAGCCTGAGTCTACTTTCAGCCAGAGCAACTCCAGGCTGCAAGTGCAGTGTCTGGCAAATAAGTaGAAAGATGACTTCATTCAT +
Preference number: 4 (lower is better)
Translates to: FLKPESTFSQSNSRLQVQCLANK*KDDFIH
Trigger: ATGAATGAAGTCATCTTTCCACTTATTTGCCAGACA...CTGCACTTGCAGCCTGGAGTTGCTCTGGCTGAAAGTAGACTCAGGCTTAAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR TCA 90 bp AGTTTTATTATTATATGTAGTTTGGGCATTGTCCACTTGCATGTCAGTCTCTCGAGCATCACACCATACTaGCCCTTGCAGCTTCTCAAC +
Preference number: 4 (lower is better)
Translates to: SFIIICSLGIVHLHVSLSSITPY*PLQLLN
Trigger: GTTGAGAAGCTGCAAGGGTCAGTATGGTGTGATGCT...CGAGAGACTGACATGCAAGTGGACAATGCCCAAACTACATATAATAATAAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273146.6
CDS-3UTR TCA 90 bp ACTCTGCATATGCACGTGCATCACACATTTTTACAGTTTCTTGAGCAGCTCACACAGCTAAAGAAAATATaGCACATCCCTGCCTTGGAA +
Preference number: 4 (lower is better)
Translates to: TLHMHVHHTFLQFLEQLTQLKKI*HIPALE
Trigger: TTCCAAGGCAGGGATGTGTCATATTTTCTTTAGCTG...TGTGAGCTGCTCAAGAAACTGTAAAAATGTGTGATGCACGTGCATATGCAGAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR TCA 90 bp TTGAGCAGCTCACAGAACATTTTCGAATGTATTTGTTGGTGCAAGGGAATAAATCAACATGCTGAGTACTaGGTCTTGGATGTCCTGACA +
Preference number: 4 (lower is better)
Translates to: LSSSQNIFECICWCKGINQHAEY*VLDVLT
Trigger: TGTCAGGACATCCAAGACTCAGTACTCAGCATGTTG...ATTTATTCCCTTGCACCAACAAATACATTCGAAAATGTTCTGTGAGCTGCTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR GCA 90 bp AAGATGAGTGAGCCCAAGAAAATGTGGCCATCAGGATGGATGCTCATTGACTCAAGTTTGTGGGACTTATaGTTTTTGTCATATGCTTCT +
Preference number: 4 (lower is better)
Translates to: KMSEPKKMWPSGWMLIDSSLWDL*FLSYAS
Trigger: AGAAGCATATGACAAAAAGCATAAGTCCCACAAACT...TGAGTCAATGAGCATCCATCCTGATGGCCACATTTTCTTGGGCTCACTCATCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR CCA 90 bp CTGTTAAACAGAAACTGGCTGAGGCCTAGAGGAACAGCATCACTTGATAAGGGTTTATTTCAAAGCGGCTaGTTAAGTCACAAAGTAGAA +
Preference number: 4 (lower is better)
Translates to: LLNRNWLRPRGTASLDKGLFQSG*LSHKVE
Trigger: TTCTACTTTGTGACTTAACCAGCCGCTTTGAAATAA...ACCCTTATCAAGTGATGCTGTTCCTCTAGGCCTCAGCCAGTTTCTGTTTAACAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273146.6
CDS-3UTR CCA 90 bp AAGATGAGTGAGCCCAAGAAAATGTGGCCATCAGGATGGATGCTCATTGACTCATTATTATATGTAGTTTaGGCATTGTCCACTTGCATG +
Preference number: 4 (lower is better)
Translates to: KMSEPKKMWPSGWMLIDSLLYVV*ALSTCM
Trigger: CATGCAAGTGGACAATGCCCAAACTACATATAATAA...TGAGTCAATGAGCATCCATCCTGATGGCCACATTTTCTTGGGCTCACTCATCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273146.6
CDS-3UTR CCA 90 bp CTTTTCCCATTTGTCCTCAAGATGAGTGAGCCCAAGAAAATGTGGCCATCAGGATTGGGTCAATTCAGATaGCTGATACAGAATATAGTT +
Preference number: 4 (lower is better)
Translates to: LFPFVLKMSEPKKMWPSGLGQFR*LIQNIV
Trigger: AACTATATTCTGTATCAGCCATCTGAATTGACCCAA...TCCTGATGGCCACATTTTCTTGGGCTCACTCATCTTGAGGACAAATGGGAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR GCA 90 bp ACTCTGCATATGCACGTGCATCACACATTTTTACAGTTTCTTGAGCAGCTCACAGAATGTATTTGTTGGTaGAAGGGAATAAATAGCCAG +
Preference number: 4 (lower is better)
Translates to: TLHMHVHHTFLQFLEQLTECICW*KGINSQ
Trigger: CTGGCTATTTATTCCCTTGCACCAACAAATACATTC...TGTGAGCTGCTCAAGAAACTGTAAAAATGTGTGATGCACGTGCATATGCAGAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR TCA 90 bp TGGGAGAAATGTAAATTGACACCACCATTTCAGAGAGCAATTTGGCAGTTTCTCCTACTTAAATGTTCATaGTTATGGGACCAGCTAAAG +
Preference number: 4 (lower is better)
Translates to: WEKCKLTPPFQRAIWQFLLLKCS*LWDQLK
Trigger: CTTTAGCTGGTCCCATAATCATGAACATTTAAGTAG...GAGAAACTGCCAAATTGCTCTCTGAAATGGTGGTGTCAATTTACATTTCTCCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS CCA 90 bp TCCTCGGCGCGCTCAGCCGGCTCGCAGACTCATCCCGCCTCCCCTTaGCCGCCCCCGGCGCCGTGGCTCGCCAGGCTTCCCAGGATGCGC +
Preference number: 5 (lower is better)
Translates to: SSARSAGSQTHPASP*PPPAPWLARLPRMR
Trigger: GCGCATCCTGGGAAGCCTGGCGAGCCACGGCGCCGGGGGCGGCCAAGGGGAGGCGGGATGAGTCTGCGAGCCGGCTGAGCGCGCCGAGGA
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000273146.6
ENST00000430121.3
ENST00000488863.5
ENST00000492161.1
CDS CCA 90 bp GGCGCCGTGGCTCGCCAGGCTTCCCAGGATGCGCGGCTACTCGGCTaGGGCGGGTTTCCCGGACTGAAGGTGCACACGTTCTCTGCAGCC +
Preference number: 5 (lower is better)
Translates to: GAVARQASQDARLLG*GGFPGLKVHTFSAA
Trigger: GGCTGCAGAGAACGTGTGCACCTTCAGTCCGGGAAACCCGCCCCAGCCGAGTAGCCGCGCATCCTGGGAAGCCTGGCGAGCCACGGCGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273146.6
ENST00000430121.3
ENST00000488863.5
ENST00000492161.1
CDS GCA 90 bp CAAGCGGTCGTGGACCTGCAACAGGAAGTCGAAGAGCGCCAGGCGTaGCCACTCGGTATGGTGGATGCCCGGGCACGGGGCCTGGCCTGG +
Preference number: 5 (lower is better)
Translates to: QAVVDLQQEVEERQA*PLGMVDARARGLAW
Trigger: CCAGGCCAGGCCCCGTGCCCGGGCATCCACCATACCGAGTGGGCACGCCTGGCGCTCTTCGACTTCCTGTTGCAGGTCCACGACCGCTTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273146.6
ENST00000430121.3
ENST00000434206.1
CDS GCA 90 bp GAGCCTACCCGCGGCCGCGAGCCTCTGCGGTCTACTCGGGACTTTTaGAGAGTTTGCAAAGTCCCTGCCGCGCGTCCCGGCCCAGCTTCC +
Preference number: 5 (lower is better)
Translates to: EPTRGREPLRSTRDF*RVCKVPAARPGPAS
Trigger: GGAAGCTGGGCCGGGACGCGCGGCAGGGACTTTGCAAACTCTGCAAAAGTCCCGAGTAGACCGCAGAGGCTCGCGGCCGCGGGTAGGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273146.6
ENST00000488863.5
CDS GCA 90 bp TGCCCGCTGCCTCCGGCTGGAGCTCAAAGCCTGCCGGATATGGGTTaGAGGGGCGCCAGTTACCCCCTGAGGCTCCATGGGACCAGGGTC +
Preference number: 5 (lower is better)
Translates to: CPLPPAGAQSLPDMG*RGASYPLRLHGTRV
Trigger: GACCCTGGTCCCATGGAGCCTCAGGGGGTAACTGGCGCCCCTGCAACCCATATCCGGCAGGCTTTGAGCTCCAGCCGGAGGCAGCGGGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273146.6
ENST00000430121.3
ENST00000434206.1
CDS GCA 90 bp ACAGGAAGTCGAAGAGCGCCAGGCGTGCCCACTCGGTATGGTGGATaGCCGGGCACGGGGCCTGGCCTGGCCAGTTGCAGCTGTGTGCCA +
Preference number: 5 (lower is better)
Translates to: TGSRRAPGVPTRYGG*PGTGPGLASCSCVP
Trigger: TGGCACACAGCTGCAACTGGCCAGGCCAGGCCCCGTGCCCGGGCATCCACCATACCGAGTGGGCACGCCTGGCGCTCTTCGACTTCCTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273146.6
ENST00000430121.3
ENST00000434206.1
CDS CCA 90 bp ACCTGCAACAGGAAGTCGAAGAGCGCCAGGCGTGCCCACTCGGTATaGTGGATGCCCGGGCACGGGGCCTGGCCTGGCCAGTTGCAGCTG +
Preference number: 5 (lower is better)
Translates to: TCNRKSKSARRAHSV*WMPGHGAWPGQLQL
Trigger: CAGCTGCAACTGGCCAGGCCAGGCCCCGTGCCCGGGCATCCACCATACCGAGTGGGCACGCCTGGCGCTCTTCGACTTCCTGTTGCAGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273146.6
ENST00000430121.3
ENST00000434206.1
CDS TCA 90 bp GCACACCGGGATACTCCGCGGGTGGGGAATACACGCCGGATCTACTaGGATCTACGGGGATCTGAGGGAGCCTACCCGCGGCCGCGAGCC +
Preference number: 5 (lower is better)
Translates to: AHRDTPRVGNTRRIY*DLRGSEGAYPRPRA
Trigger: GGCTCGCGGCCGCGGGTAGGCTCCCTCAGATCCCCGTAGATCTCAGTAGATCCGGCGTGTATTCCCCACCCGCGGAGTATCCCGGTGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273146.6
ENST00000430121.3
ENST00000488863.5
ENST00000492161.1
CDS TCA 90 bp CTCAAAGCCTGCCGGATATGGGTTGCAGGGGCGCCAGTTACCCCCTaGGGCTCCATGGGACCAGGGTCTGGGCCGGCGGATGGACGCTGT +
Preference number: 5 (lower is better)
Translates to: LKACRIWVAGAPVTP*GSMGPGSGPADGRC
Trigger: ACAGCGTCCATCCGCCGGCCCAGACCCTGGTCCCATGGAGCCTCAGGGGGTAACTGGCGCCCCTGCAACCCATATCCGGCAGGCTTTGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273146.6
ENST00000430121.3
ENST00000434206.1
CDS CCA 90 bp TGCAACAGGAAGTCGAAGAGCGCCAGGCGTGCCCACTCGGTATGGTaGATGCCCGGGCACGGGGCCTGGCCTGGCCAGTTGCAGCTGTGT +
Preference number: 5 (lower is better)
Translates to: CNRKSKSARRAHSVW*MPGHGAWPGQLQLC
Trigger: ACACAGCTGCAACTGGCCAGGCCAGGCCCCGTGCCCGGGCATCCACCATACCGAGTGGGCACGCCTGGCGCTCTTCGACTTCCTGTTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273146.6
ENST00000430121.3
ENST00000434206.1
CDS TCA 90 bp CTTCCCAGGATGCGCGGCTACTCGGCTGGGGCGGGTTTCCCGGACTaGAGGTGCACACGTTCTCTGCAGCCAAGTGGCCCTGCGCCAACT +
Preference number: 5 (lower is better)
Translates to: LPRMRGYSAGAGFPD*RCTRSLQPSGPAPT
Trigger: AGTTGGCGCAGGGCCACTTGGCTGCAGAGAACGTGTGCACCTTCAGTCCGGGAAACCCGCCCCAGCCGAGTAGCCGCGCATCCTGGGAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273146.6
ENST00000430121.3
ENST00000488863.5
ENST00000492161.1
CDS GCA 90 bp TGTCCCAGCAGCACCTGTCCTCGCTGCTCCAGGGTCTGGAGGACCTaGTTCAGCCCCTGGGCTCCGCCTTGGCTTTCCCAGAACACTGGG +
Preference number: 5 (lower is better)
Translates to: CPSSTCPRCSRVWRT*FSPWAPPWLSQNTG
Trigger: CCCAGTGTTCTGGGAAAGCCAAGGCGGAGCCCAGGGGCTGAAGCAGGTCCTCCAGACCCTGGAGCAGCGAGGACAGGTGCTGCTGGGACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273146.6
ENST00000430121.3
ENST00000488863.5
CDS GCA 90 bp ACTCGGCTGGGGCGGGTTTCCCGGACTGAAGGTGCACACGTTCTCTaGAGCCAAGTGGCCCTGCGCCAACTCTCGGGAGATCGCTGCACA +
Preference number: 5 (lower is better)
Translates to: TRLGRVSRTEGAHVL*SQVALRQLSGDRCT
Trigger: TGTGCAGCGATCTCCCGAGAGTTGGCGCAGGGCCACTTGGCTGCAGAGAACGTGTGCACCTTCAGTCCGGGAAACCCGCCCCAGCCGAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273146.6
ENST00000430121.3
ENST00000488863.5
ENST00000492161.1
CDS GCA 90 bp CTGCCCATGGGCGGGGACCCTGGCTTTGTCCACCACCTCCCCCTGTaGCAACAGACGGAGCATCTGCACATCGTGGTCTGTCAGCCATGG +
Preference number: 5 (lower is better)
Translates to: LPMGGDPGFVHHLPL*QQTEHLHIVVCQPW
Trigger: CCATGGCTGACAGACCACGATGTGCAGATGCTCCGTCTGTTGGCACAGGGGGAGGTGGTGGACAAAGCCAGGGTCCCCGCCCATGGGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273146.6
ENST00000430121.3
ENST00000434206.1
CDS CCA 90 bp CTGCTCCGGACCAGGATGTGGACCAGCCGCAGCTCGGCTGGGTTCTaGCATTTCTCTCGGAGCCTCTCTTCCACACAGGGGTCTGAGGGC +
Preference number: 5 (lower is better)
Translates to: LLRTRMWTSRSSAGF*HFSRSLSSTQGSEG
Trigger: GCCCTCAGACCCCTGTGTGGAAGAGAGGCTCCGAGAGAAATGCCAGAACCCAGCCGAGCTGCGGCTGGTCCACATCCTGGTCCGGAGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273146.6
ENST00000430121.3
ENST00000488863.5
CDS TCA 90 bp CCTCATCTGGGTCGCTCAGGTGCTGCACATCGGGTGCCCACCAGATaGCAGGCCTTGCTCCACCGTCTGTGTATCGGTAGGGCAGGAGGG +
Preference number: 5 (lower is better)
Translates to: PHLGRSGAAHRVPTR*QALLHRLCIGRAGG
Trigger: CCCTCCTGCCCTACCGATACACAGACGGTGGAGCAAGGCCTGTCATCTGGTGGGCACCCGATGTGCAGCACCTGAGCGACCCAGATGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273146.6
ENST00000430121.3
ENST00000434206.1
CDS GCA 90 bp GTTCTCTGCAGCCAAGTGGCCCTGCGCCAACTCTCGGGAGATCGCTaGACACCGGGATACTCCGCGGGTGGGGAATACACGCCGGATCTA +
Preference number: 5 (lower is better)
Translates to: VLCSQVALRQLSGDR*TPGYSAGGEYTPDL
Trigger: TAGATCCGGCGTGTATTCCCCACCCGCGGAGTATCCCGGTGTGCAGCGATCTCCCGAGAGTTGGCGCAGGGCCACTTGGCTGCAGAGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273146.6
ENST00000430121.3
ENST00000488863.5
ENST00000492161.1
CDS GCA 90 bp TTTCCCGGACTGAAGGTGCACACGTTCTCTGCAGCCAAGTGGCCCTaGGCCAACTCTCGGGAGATCGCTGCACACCGGGATACTCCGCGG +
Preference number: 5 (lower is better)
Translates to: FPGLKVHTFSAAKWP*ANSREIAAHRDTPR
Trigger: CCGCGGAGTATCCCGGTGTGCAGCGATCTCCCGAGAGTTGGCGCAGGGCCACTTGGCTGCAGAGAACGTGTGCACCTTCAGTCCGGGAAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273146.6
ENST00000430121.3
ENST00000488863.5
ENST00000492161.1
CDS GCA 90 bp CAGATAGGATCATCAAGAGGCAGAACGCTATCACTGGCCGCCTCTTaGCACGCAGCTTTCTCCGGAGCCAAGACGCCCGCGGCCGCGAGC +
Preference number: 5 (lower is better)
Translates to: QIGSSRGRTLSLAAS*HAAFSGAKTPAAAS
Trigger: GCTCGCGGCCGCGGGCGTCTTGGCTCCGGAGAAAGCTGCGTGGCAAGAGGCGGCCAGTGATAGCGTTCTGCCTCTTGATGATCCTATCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434206.1
CDS CCA 90 bp GGCGGGTTTCCCGGACTGAAGGTGCACACGTTCTCTGCAGCCAAGTaGCCCTGCGCCAACTCTCGGGAGATCGCTGCACACCGGGATACT +
Preference number: 5 (lower is better)
Translates to: GGFPGLKVHTFSAAK*PCANSREIAAHRDT
Trigger: AGTATCCCGGTGTGCAGCGATCTCCCGAGAGTTGGCGCAGGGCCACTTGGCTGCAGAGAACGTGTGCACCTTCAGTCCGGGAAACCCGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273146.6
ENST00000430121.3
ENST00000488863.5
ENST00000492161.1
CDS CCA 90 bp TGGATCGCTGCTCCGGACCAGGATGTGGACCAGCCGCAGCTCGGCTaGGTTCTGGCATTTCTCTCGGAGCCTCTCTTCCACACAGGGGTC +
Preference number: 5 (lower is better)
Translates to: WIAAPDQDVDQPQLG*VLAFLSEPLFHTGV
Trigger: GACCCCTGTGTGGAAGAGAGGCTCCGAGAGAAATGCCAGAACCCAGCCGAGCTGCGGCTGGTCCACATCCTGGTCCGGAGCAGCGATCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273146.6
ENST00000430121.3
ENST00000488863.5
CDS GCA 90 bp CTGGGCAAAGCACGGCTTCTCCAGAAGCCCATGTTTCTTGCCCGCTaGCTCCGGCTGGAGCTCAAAGCCTGCCGGATATGGGTTGCAGGG +
Preference number: 5 (lower is better)
Translates to: LGKARLLQKPMFLAR*LRLELKACRIWVAG
Trigger: CCCTGCAACCCATATCCGGCAGGCTTTGAGCTCCAGCCGGAGGCAGCGGGCAAGAAACATGGGCTTCTGGAGAAGCCGTGCTTTGCCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273146.6
ENST00000430121.3
ENST00000434206.1
CDS GCA 90 bp GTCGCTCAGGTGCTGCACATCGGGTGCCCACCAGATGACAGGCCTTaGTCCACCGTCTGTGTATCGGTAGGGCAGGAGGGGGCTATGGAA +
Preference number: 5 (lower is better)
Translates to: VAQVLHIGCPPDDRP*STVCVSVGQEGAME
Trigger: TTCCATAGCCCCCTCCTGCCCTACCGATACACAGACGGTGGAGCAAGGCCTGTCATCTGGTGGGCACCCGATGTGCAGCACCTGAGCGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273146.6
ENST00000430121.3
ENST00000434206.1
CDS CCA 90 bp GCGCCAACTCTCGGGAGATCGCTGCACACCGGGATACTCCGCGGGTaGGGAATACACGCCGGATCTACTGAGATCTACGGGGATCTGAGG +
Preference number: 5 (lower is better)
Translates to: APTLGRSLHTGILRG*GIHAGSTEIYGDLR
Trigger: CCTCAGATCCCCGTAGATCTCAGTAGATCCGGCGTGTATTCCCCACCCGCGGAGTATCCCGGTGTGCAGCGATCTCCCGAGAGTTGGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273146.6
ENST00000430121.3
ENST00000488863.5
ENST00000492161.1
CDS CCA 90 bp CACGGCTTCTCCAGAAGCCCATGTTTCTTGCCCGCTGCCTCCGGCTaGAGCTCAAAGCCTGCCGGATATGGGTTGCAGGGGCGCCAGTTA +
Preference number: 5 (lower is better)
Translates to: HGFSRSPCFLPAASG*SSKPAGYGLQGRQL
Trigger: TAACTGGCGCCCCTGCAACCCATATCCGGCAGGCTTTGAGCTCCAGCCGGAGGCAGCGGGCAAGAAACATGGGCTTCTGGAGAAGCCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273146.6
ENST00000430121.3
ENST00000434206.1
CDS CCA 90 bp CCTGGGAGTGGACTGACCAGGGTGACCACCTCACTCTGTGTCTCCTaGATGGGACTGCCATGCTGGGGGTGGCCCAGGTCTTTGGTTCCT +
Preference number: 5 (lower is better)
Translates to: PGSGLTRVTTSLCVS*MGLPCWGWPRSLVP
Trigger: AGGAACCAAAGACCTGGGCCACCCCCAGCATGGCAGTCCCATCCAGGAGACACAGAGTGAGGTGGTCACCCTGGTCAGTCCACTCCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273146.6
ENST00000430121.3
ENST00000434206.1
CDS CCA 90 bp AGGAGACGTACCAGGATGTGGACCAGCCGCAGCTCGGCTGGGTTCTaGCATTTCTCTCGGAGCCTCTCTTCCACACAGGGGTCTGAGGGC +
Preference number: 5 (lower is better)
Translates to: RRRTRMWTSRSSAGF*HFSRSLSSTQGSEG
Trigger: GCCCTCAGACCCCTGTGTGGAAGAGAGGCTCCGAGAGAAATGCCAGAACCCAGCCGAGCTGCGGCTGGTCCACATCCTGGTACGTCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434206.1
ENST00000492161.1
CDS CCA 90 bp GGTGTGGAGGAGACGTACCAGGATGTGGACCAGCCGCAGCTCGGCTaGGTTCTGGCATTTCTCTCGGAGCCTCTCTTCCACACAGGGGTC +
Preference number: 5 (lower is better)
Translates to: GVEETYQDVDQPQLG*VLAFLSEPLFHTGV
Trigger: GACCCCTGTGTGGAAGAGAGGCTCCGAGAGAAATGCCAGAACCCAGCCGAGCTGCGGCTGGTCCACATCCTGGTACGTCTCCTCCACACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434206.1
ENST00000492161.1
CDS CCA 90 bp GTCTGGGGTGACAAGGGGATGGTGTGGAGGAGACGTACCAGGATGTaGACCAGCCGCAGCTCGGCTGGGTTCTGGCATTTCTCTCGGAGC +
Preference number: 5 (lower is better)
Translates to: VWGDKGMVWRRRTRM*TSRSSAGFWHFSRS
Trigger: GCTCCGAGAGAAATGCCAGAACCCAGCCGAGCTGCGGCTGGTCCACATCCTGGTACGTCTCCTCCACACCATCCCCTTGTCACCCCAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434206.1
ENST00000492161.1
CDS CCA 90 bp GAAGGACACAGAAAGACCTGGGTCTGGGGTGACAAGGGGATGGTGTaGAGGAGACGTACCAGGATGTGGACCAGCCGCAGCTCGGCTGGG +
Preference number: 5 (lower is better)
Translates to: EGHRKTWVWGDKGMV*RRRTRMWTSRSSAG
Trigger: CCCAGCCGAGCTGCGGCTGGTCCACATCCTGGTACGTCTCCTCCACACCATCCCCTTGTCACCCCAGACCCAGGTCTTTCTGTGTCCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434206.1
ENST00000492161.1
CDS GCA 90 bp CAGATAGGATCATCAAGAGGCAGAACGCTATCACTGGCCGCCTCTTaGCACGCAGCTTTCTCCGGAGCCAAGACGCCATGTCCCCGGCGG +
Preference number: 5 (lower is better)
Translates to: QIGSSRGRTLSLAAS*HAAFSGAKTPCPRR
Trigger: CCGCCGGGGACATGGCGTCTTGGCTCCGGAGAAAGCTGCGTGGCAAGAGGCGGCCAGTGATAGCGTTCTGCCTCTTGATGATCCTATCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273146.6
ENST00000430121.3
CDS GCA 90 bp GGAGTTCCTGGGCAAAGCACGGCTTCTCCAGAAGCCCATGTTTCTTaGCCGCTGCCTCCGGCTGGAGCTCAAAGCCTGCCGGATATGGGT +
Preference number: 5 (lower is better)
Translates to: GVPGQSTASPEAHVS*PLPPAGAQSLPDMG
Trigger: ACCCATATCCGGCAGGCTTTGAGCTCCAGCCGGAGGCAGCGGGCAAGAAACATGGGCTTCTGGAGAAGCCGTGCTTTGCCCAGGAACTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273146.6
ENST00000430121.3
ENST00000434206.1
CDS GCA 90 bp CGTGGTCTGTCAGCCATGGGGGAGCCTGCCCACCAGTCCTCGAGCTaGTCAACAGCGTCTCAGCATCACACCATACTGACCCTTGCAGCT +
Preference number: 5 (lower is better)
Translates to: RGLSAMGEPAHQSSS*STASQHHTILTLAA
Trigger: AGCTGCAAGGGTCAGTATGGTGTGATGCTGAGACGCTGTTGAGCAGCTCGAGGACTGGTGGGCAGGCTCCCCCATGGCTGACAGACCACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273146.6
ENST00000430121.3
ENST00000434206.1
CDS GCA 90 bp AGACGGAGCATCTGCACATCGTGGTCTGTCAGCCATGGGGGAGCCTaGCCACCAGTCCTCGAGCTGCTCAACAGCGTCTCAGCATCACAC +
Preference number: 5 (lower is better)
Translates to: RRSICTSWSVSHGGA*PPVLELLNSVSASH
Trigger: GTGTGATGCTGAGACGCTGTTGAGCAGCTCGAGGACTGGTGGGCAGGCTCCCCCATGGCTGACAGACCACGATGTGCAGATGCTCCGTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273146.6
ENST00000430121.3
ENST00000434206.1
CDS TCA 90 bp TGGGTTCTGGCATTTCTCTCGGAGCCTCTCTTCCACACAGGGGTCTaGGGGCTCAGGCTCGAAGCCACAGCAGTAGCGATCCAAGCGGTC +
Preference number: 5 (lower is better)
Translates to: WVLAFLSEPLFHTGV*GLRLEATAVAIQAV
Trigger: GACCGCTTGGATCGCTACTGCTGTGGCTTCGAGCCTGAGCCCTCAGACCCCTGTGTGGAAGAGAGGCTCCGAGAGAAATGCCAGAACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000273146.6
ENST00000430121.3
ENST00000434206.1
ENST00000488863.5
ENST00000492161.1
CDS GCA 90 bp ACCAGGGTGACCACCTCACTCTGTGTCTCCTGGATGGGACTGCCATaGTGGGGGTGGCCCAGGTCTTTGGTTCCTGGATCTCCAACCTCA +
Preference number: 5 (lower is better)
Translates to: TRVTTSLCVSWMGLP*WGWPRSLVPGSPTS
Trigger: TGAGGTTGGAGATCCAGGAACCAAAGACCTGGGCCACCCCCAGCATGGCAGTCCCATCCAGGAGACACAGAGTGAGGTGGTCACCCTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273146.6
ENST00000430121.3
ENST00000434206.1
CDS CCA 90 bp ACCACCTCACTCTGTGTCTCCTGGATGGGACTGCCATGCTGGGGGTaGCCCAGGTCTTTGGTTCCTGGATCTCCAACCTCATCCTCCCTC +
Preference number: 5 (lower is better)
Translates to: TTSLCVSWMGLPCWG*PRSLVPGSPTSSSL
Trigger: GAGGGAGGATGAGGTTGGAGATCCAGGAACCAAAGACCTGGGCCACCCCCAGCATGGCAGTCCCATCCAGGAGACACAGAGTGAGGTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273146.6
ENST00000430121.3
ENST00000434206.1
CDS CCA 90 bp AGGGTGACCACCTCACTCTGTGTCTCCTGGATGGGACTGCCATGCTaGGGGTGGCCCAGGTCTTTGGTTCCTGGATCTCCAACCTCATCC +
Preference number: 5 (lower is better)
Translates to: RVTTSLCVSWMGLPC*GWPRSLVPGSPTSS
Trigger: GGATGAGGTTGGAGATCCAGGAACCAAAGACCTGGGCCACCCCCAGCATGGCAGTCCCATCCAGGAGACACAGAGTGAGGTGGTCACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273146.6
ENST00000430121.3
ENST00000434206.1
CDS CCA 90 bp CTGATACTGCAGCCAGCCCAAGGCCAGAGAGTTCTGATCCTCATCTaGGTCGCTCAGGTGCTGCACATCGGGTGCCCACCAGATGACAGG +
Preference number: 5 (lower is better)
Translates to: LILQPAQGQRVLILI*VAQVLHIGCPPDDR
Trigger: CCTGTCATCTGGTGGGCACCCGATGTGCAGCACCTGAGCGACCCAGATGAGGATCAGAACTCTCTGGCCTTGGGCTGGCTGCAGTATCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273146.6
ENST00000430121.3
ENST00000434206.1
CDS CCA 90 bp GCGGCTTATGGGTCCTCGTCCCTGAAGAGTGTGAGGTTGTGCTTTTaGATGTGTCCCAGCAGCACCTGTCCTCGCTGCTCCAGGGTCTGG +
Preference number: 5 (lower is better)
Translates to: AAYGSSSLKSVRLCF*MCPSSTCPRCSRVW
Trigger: CCAGACCCTGGAGCAGCGAGGACAGGTGCTGCTGGGACACATCCAAAAGCACAACCTCACACTCTTCAGGGACGAGGACCCATAAGCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273146.6
ENST00000430121.3
CDS CCA 90 bp CTTCTGAAGGACACAGAAAGACCTGGGTCTGGGGTGACAAGGGGATaGTGTGGAGGAGACGTACCAGGATGTGGACCAGCCGCAGCTCGG +
Preference number: 5 (lower is better)
Translates to: LLKDTERPGSGVTRG*CGGDVPGCGPAAAR
Trigger: CCGAGCTGCGGCTGGTCCACATCCTGGTACGTCTCCTCCACACCATCCCCTTGTCACCCCAGACCCAGGTCTTTCTGTGTCCTTCAGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434206.1
ENST00000492161.1
CDS GCA 90 bp CCTCCTGGGGACTCCCTGCTTCTGTCCACTCTTGCTCTATGGCCTTaGTCCTCAGCACAGACCAAGATGGAGTTCCTGGGCAAAGCACGG +
Preference number: 5 (lower is better)
Translates to: PPGDSLLLSTLALWP*SSAQTKMEFLGKAR
Trigger: CCGTGCTTTGCCCAGGAACTCCATCTTGGTCTGTGCTGAGGAGCAAGGCCATAGAGCAAGAGTGGACAGAAGCAGGGAGTCCCCAGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273146.6
ENST00000430121.3
ENST00000434206.1
CDS GCA 90 bp AGCCCCTGGGCTCCGCCTTGGCTTTCCCAGAACACTGGGTCCATCTaGAGCGACTTCAGCAGCATGTTCTGTAGACACCCTGATGCGAGA +
Preference number: 5 (lower is better)
Translates to: SPWAPPWLSQNTGSI*SDFSSMFCRHPDAR
Trigger: TCTCGCATCAGGGTGTCTACAGAACATGCTGCTGAAGTCGCTGCAGATGGACCCAGTGTTCTGGGAAAGCCAAGGCGGAGCCCAGGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273146.6
ENST00000430121.3
ENST00000488863.5
CDS CCA 90 bp CTGGATGGGACTGCCATGCTGGGGGTGGCCCAGGTCTTTGGTTCCTaGATCTCCAACCTCATCCTCCCTCAGGAGCACAACATGCTGAGT +
Preference number: 5 (lower is better)
Translates to: LDGTAMLGVAQVFGS*ISNLILPQEHNMLS
Trigger: ACTCAGCATGTTGTGCTCCTGAGGGAGGATGAGGTTGGAGATCCAGGAACCAAAGACCTGGGCCACCCCCAGCATGGCAGTCCCATCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273146.6
ENST00000430121.3
ENST00000434206.1
CDS CCA 90 bp GTGTCTCCTGGATGGGACTGCCATGCTGGGGGTGGCCCAGGTCTTTaGTTCCTGGATCTCCAACCTCATCCTCCCTCAGGAGCACAACAT +
Preference number: 5 (lower is better)
Translates to: VSPGWDCHAGGGPGL*FLDLQPHPPSGAQH
Trigger: ATGTTGTGCTCCTGAGGGAGGATGAGGTTGGAGATCCAGGAACCAAAGACCTGGGCCACCCCCAGCATGGCAGTCCCATCCAGGAGACAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273146.6
ENST00000430121.3
ENST00000434206.1
CDS GCA 90 bp AGAGTTCTGATCCTCATCTGGGTCGCTCAGGTGCTGCACATCGGGTaGCCACCAGATGACAGGCCTTGCTCCACCGTCTGTGTATCGGTA +
Preference number: 5 (lower is better)
Translates to: RVLILIWVAQVLHIG*PPDDRPCSTVCVSV
Trigger: TACCGATACACAGACGGTGGAGCAAGGCCTGTCATCTGGTGGGCACCCGATGTGCAGCACCTGAGCGACCCAGATGAGGATCAGAACTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273146.6
ENST00000430121.3
ENST00000434206.1
CDS CCA 90 bp GCTTCTCAACAGAGCCAGGCCACTGATGAGCTCCTGAGGCCAAGGTaGGATCCTCTGCTTGTTGCCCACCAGTCAAGGCTCTGTTCTCAG +
Preference number: 5 (lower is better)
Translates to: ASQQSQATDELLRPR*DPLLVAHQSRLCSQ
Trigger: CTGAGAACAGAGCCTTGACTGGTGGGCAACAAGCAGAGGATCCCACCTTGGCCTCAGGAGCTCATCAGTGGCCTGGCTCTGTTGAGAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273146.6
ENST00000430121.3
ENST00000434206.1
CDS-3UTR CAA 90 bp CCAAGAAAATGTGGCCATCAGGATGGATGCTCATTGACTCAGGGCTGTGTGCGGATCACTGGCCGCCTCTaGCCACGCAGCTTTCTCCGG +
Preference number: 5 (lower is better)
Translates to: PRKCGHQDGCSLTQGCVRITGRL*PRSFLR
Trigger: CCGGAGAAAGCTGCGTGGCAAGAGGCGGCCAGTGAT...CCGCACACAGCCCTGAGTCAATGAGCATCCATCCTGATGGCCACATTTTCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273146.6
ENST00000430121.3
CDS-3UTR CAA 90 bp CCAAGAAAATGTGGCCATCAGGATGGATGCTCATTGACTCAGGGCTGTGTGCGGAGAAGCCCATGTTTCTaGCCCGCTGCCTCCGGCTGG +
Preference number: 5 (lower is better)
Translates to: PRKCGHQDGCSLTQGCVRRSPCF*PAASGW
Trigger: CCAGCCGGAGGCAGCGGGCAAGAAACATGGGCTTCT...CCGCACACAGCCCTGAGTCAATGAGCATCCATCCTGATGGCCACATTTTCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273146.6
ENST00000430121.3
CDS-3UTR CAA 90 bp TCACTCCCACCTCTGGCTGAGTGTAGGTCTACCAGGCAGAAGGCAAAGCAGAGAGGGTGGCCCAGGTCTTaGGTTCCTGGATCTCCAACC +
Preference number: 5 (lower is better)
Translates to: SLPPLAECRSTRQKAKQRGWPRS*VPGSPT
Trigger: GGTTGGAGATCCAGGAACCAAAGACCTGGGCCACCC...TCTCTGCTTTGCCTTCTGCCTGGTAGACCTACACTCAGCCAGAGGTGGGAGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273146.6
CDS-3UTR CAA 90 bp TCCTTGGAAAGAACTCCACCATCCCAGGCAGGTGAAATATCCCGTGACATCCTTGCGGGGACCCTGGCTTaGTCCACCACCTCCCCCTGT +
Preference number: 5 (lower is better)
Translates to: SLERTPPSQAGEISRDILAGTLA*STTSPC
Trigger: ACAGGGGGAGGTGGTGGACAAAGCCAGGGTCCCCGC...AAGGATGTCACGGGATATTTCACCTGCCTGGGATGGTGGAGTTCTTTCCAAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273146.6
CDS TCA 90 bp ACCAGTCCTCGAGCTGCTCAACAGCGTCTCAGCATCACACCATACTaGCCCTTGCAGCTTCTCAACAGAGCCAGGCCACTGATGAGCTCC +
Preference number: 5 (lower is better)
Translates to: TSPRAAQQRLSITPY*PLQLLNRARPLMSS
Trigger: GGAGCTCATCAGTGGCCTGGCTCTGTTGAGAAGCTGCAAGGGTCAGTATGGTGTGATGCTGAGACGCTGTTGAGCAGCTCGAGGACTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273146.6
ENST00000430121.3
ENST00000434206.1
CDS GCA 90 bp CCTCCAGCAGCCGAAAGTTCAGCTTGTCCTCAGGGTGCTGAAGGTTaGCAGCGTTATCGATGTAGACCAGGTGAGATGGATCGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: PPAAESSACPQGAEG*QRYRCRPGEMDRCS
Trigger: GGAGCAGCGATCCATCTCACCTGGTCTACATCGATAACGCTGGCAACCTTCAGCACCCTGAGGACAAGCTGAACTTTCGGCTGCTGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273146.6
ENST00000430121.3
ENST00000488863.5
CDS GCA 90 bp GCAGAAGAAGTGGCTATTCTGCCCTCTCCAATGGCCTCGGCACATTaGTTCCCACCCTGGACTCTAGTTTTGACAGGAGCAGCACCAGCC +
Preference number: 5 (lower is better)
Translates to: AEEVAILPSPMASAH*FPPWTLVLTGAAPA
Trigger: GGCTGGTGCTGCTCCTGTCAAAACTAGAGTCCAGGGTGGGAAGCAATGTGCCGAGGCCATTGGAGAGGGCAGAATAGCCACTTCTTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492161.1
CDS CCA 90 bp AAGCCCTTCCCCGGGGGAAGCACCTTGCTTCTTATGCAGAAGAAGTaGCTATTCTGCCCTCTCCAATGGCCTCGGCACATTGCTTCCCAC +
Preference number: 5 (lower is better)
Translates to: KPFPGGSTLLLMQKK*LFCPLQWPRHIASH
Trigger: GTGGGAAGCAATGTGCCGAGGCCATTGGAGAGGGCAGAATAGCCACTTCTTCTGCATAAGAAGCAAGGTGCTTCCCCCGGGGAAGGGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492161.1
CDS-3UTR CAA 90 bp AAAGAACTCCACCATCCCAGGCAGGTGAAATATCCCGTGACATCCTTGTGCCCCGGTGGGATCCTCTGCTaGTTGCCCACCAGTCAAGGC +
Preference number: 5 (lower is better)
Translates to: KELHHPRQVKYPVTSLCPGGILC*LPTSQG
Trigger: GCCTTGACTGGTGGGCAACAAGCAGAGGATCCCACC...GGGGCACAAGGATGTCACGGGATATTTCACCTGCCTGGGATGGTGGAGTTCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273146.6
CDS-3UTR CAA 90 bp TTGGAAAGAACTCCACCATCCCAGGCAGGTGAAATATCCCGTGACATCCTTGTGCCCCTGGGCTCCGCCTaGGCTTTCCCAGAACACTGG +
Preference number: 5 (lower is better)
Translates to: LERTPPSQAGEISRDILVPLGSA*AFPEHW
Trigger: CCAGTGTTCTGGGAAAGCCAAGGCGGAGCCCAGGGG...CACAAGGATGTCACGGGATATTTCACCTGCCTGGGATGGTGGAGTTCTTTCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273146.6
CDS TCA 90 bp CTTCCCACCCTGGACTCTAGTTTTGACAGGAGCAGCACCAGCCTGTaGGCCACTGCAGTCTTGGGTTCATGCCCTAATGCTGCTAGCGTA +
Preference number: 5 (lower is better)
Translates to: LPTLDSSFDRSSTSL*ATAVLGSCPNAASV
Trigger: TACGCTAGCAGCATTAGGGCATGAACCCAAGACTGCAGTGGCTCACAGGCTGGTGCTGCTCCTGTCAAAACTAGAGTCCAGGGTGGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434206.1
ENST00000492161.1
CDS CCA 90 bp TTGCTCTATGGCCTTGCTCCTCAGCACAGACCAAGATGGAGTTCCTaGGCAAAGCACGGCTTCTCCAGAAGCCCATGTTTCTTGCCCGCT +
Preference number: 5 (lower is better)
Translates to: LLYGLAPQHRPRWSS*AKHGFSRSPCFLPA
Trigger: AGCGGGCAAGAAACATGGGCTTCTGGAGAAGCCGTGCTTTGCCCAGGAACTCCATCTTGGTCTGTGCTGAGGAGCAAGGCCATAGAGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273146.6
ENST00000430121.3
ENST00000434206.1
CDS-3UTR CAA 90 bp AAAGAACTCCACCATCCCAGGCAGGTGAAATATCCCGTGACATCCTTGTGCCCCGGACTTTTGCAGAGTTaGCAAAGTCCCTGCCGCGCG +
Preference number: 5 (lower is better)
Translates to: KELHHPRQVKYPVTSLCPGLLQS*QSPCRA
Trigger: CGCGCGGCAGGGACTTTGCAAACTCTGCAAAAGTCC...GGGGCACAAGGATGTCACGGGATATTTCACCTGCCTGGGATGGTGGAGTTCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273146.6
CDS-3UTR CAA 90 bp ATGAAGATTGTACCTTTATTAGGTTGGTCTCAGGTATTGCATGCAGGCGGGCACGCGGGGACCCTGGCTTaGTCCACCACCTCCCCCTGT +
Preference number: 5 (lower is better)
Translates to: MKIVPLLGWSQVLHAGGHAGTLA*STTSPC
Trigger: ACAGGGGGAGGTGGTGGACAAAGCCAGGGTCCCCGC...GTGCCCGCCTGCATGCAATACCTGAGACCAACCTAATAAAGGTACAATCTTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR CAA 90 bp ATTGTACCTTTATTAGGTTGGTCTCAGGTATTGCATGCAGGCGGGCACACATGCCCCCTGGGCTCCGCCTaGGCTTTCCCAGAACACTGG +
Preference number: 5 (lower is better)
Translates to: IVPLLGWSQVLHAGGHTCPLGSA*AFPEHW
Trigger: CCAGTGTTCTGGGAAAGCCAAGGCGGAGCCCAGGGG...GCATGTGTGCCCGCCTGCATGCAATACCTGAGACCAACCTAATAAAGGTACAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS CCA 90 bp TGTCCACTCTTGCTCTATGGCCTTGCTCCTCAGCACAGACCAAGATaGAGTTCCTGGGCAAAGCACGGCTTCTCCAGAAGCCCATGTTTC +
Preference number: 5 (lower is better)
Translates to: CPLLLYGLAPQHRPR*SSWAKHGFSRSPCF
Trigger: GAAACATGGGCTTCTGGAGAAGCCGTGCTTTGCCCAGGAACTCCATCTTGGTCTGTGCTGAGGAGCAAGGCCATAGAGCAAGAGTGGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273146.6
ENST00000430121.3
ENST00000434206.1
CDS-3UTR CAA 90 bp CCTCTGGCTGAGTGTAGGTCTACCAGGCAGAAGGCAAAGCAGAGACTGTTAAACGGGATCCTCTGCTTGTaGCCCACCAGTCAAGGCTCT +
Preference number: 5 (lower is better)
Translates to: PLAECRSTRQKAKQRLLNGILCL*PTSQGS
Trigger: AGAGCCTTGACTGGTGGGCAACAAGCAGAGGATCCC...GTTTAACAGTCTCTGCTTTGCCTTCTGCCTGGTAGACCTACACTCAGCCAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273146.6
CDS-3UTR CAA 90 bp TCTACCAGGCAGAAGGCAAAGCAGAGACTGTTAAACAGAAACTGGCTGAGGCCTCAGGCCACAGAGCCCTaGGGAACAGAGTTGGCTGAG +
Preference number: 5 (lower is better)
Translates to: STRQKAKQRLLNRNWLRPQATEP*GTELAE
Trigger: CTCAGCCAACTCTGTTCCCAAGGGCTCTGTGGCCTG...AGGCCTCAGCCAGTTTCTGTTTAACAGTCTCTGCTTTGCCTTCTGCCTGGTAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273146.6
CDS-3UTR CAA 90 bp CTTTTCCCATTTGTCCTCAAGATGAGTGAGCCCAAGAAAATGTGGCCATCAGGAAGAAGCCCATGTTTCTaGCCCGCTGCCTCCGGCTGG +
Preference number: 5 (lower is better)
Translates to: LFPFVLKMSEPKKMWPSGRSPCF*PAASGW
Trigger: CCAGCCGGAGGCAGCGGGCAAGAAACATGGGCTTCT...TCCTGATGGCCACATTTTCTTGGGCTCACTCATCTTGAGGACAAATGGGAAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273146.6
ENST00000430121.3
CDS-3UTR CAA 90 bp TTTCTTAAGCCTGAGTCTACTTTCAGCCAGAGCAACTCCAGGCTGCAAGTGCAGGGGATCCTCTGCTTGTaGCCCACCAGTCAAGGCTCT +
Preference number: 5 (lower is better)
Translates to: FLKPESTFSQSNSRLQVQGILCL*PTSQGS
Trigger: AGAGCCTTGACTGGTGGGCAACAAGCAGAGGATCCC...CTGCACTTGCAGCCTGGAGTTGCTCTGGCTGAAAGTAGACTCAGGCTTAAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR CAA 90 bp TTTCTTAAGCCTGAGTCTACTTTCAGCCAGAGCAACTCCAGGCTGCAAGTGCAGGGTTGGTCTCAGGTATaGCATGCAGGCGGGCACACA +
Preference number: 5 (lower is better)
Translates to: FLKPESTFSQSNSRLQVQGWSQV*HAGGHT
Trigger: TGTGTGCCCGCCTGCATGCAATACCTGAGACCAACC...CTGCACTTGCAGCCTGGAGTTGCTCTGGCTGAAAGTAGACTCAGGCTTAAGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS CCA 90 bp AACTTGTTAACAGCATCTTCTGAAGGACACAGAAAGACCTGGGTCTaGGGTGACAAGGGGATGGTGTGGAGGAGACGTACCAGGATGTGG +
Preference number: 5 (lower is better)
Translates to: NLLTASSEGHRKTWV*GDKGMVWRRRTRMW
Trigger: CCACATCCTGGTACGTCTCCTCCACACCATCCCCTTGTCACCCCAGACCCAGGTCTTTCTGTGTCCTTCAGAAGATGCTGTTAACAAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434206.1
ENST00000492161.1
CDS-3UTR CAA 90 bp ACACACACACACATACACACCGCTAGGGAGTTTGTGGGACTTATGCTTTTTGTCGGGTGGCCCAGGTCTTaGGTTCCTGGATCTCCAACC +
Preference number: 5 (lower is better)
Translates to: THTHIHTAREFVGLMLFVGWPRS*VPGSPT
Trigger: GGTTGGAGATCCAGGAACCAAAGACCTGGGCCACCC...GACAAAAAGCATAAGTCCCACAAACTCCCTAGCGGTGTGTATGTGTGTGTGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR CAA 90 bp ACACACACACACATACACACCGCTAGGGAGTTTGTGGGACTTATGCTTTTTGTCGGTGGGATCCTCTGCTaGTTGCCCACCAGTCAAGGC +
Preference number: 5 (lower is better)
Translates to: THTHIHTAREFVGLMLFVGGILC*LPTSQG
Trigger: GCCTTGACTGGTGGGCAACAAGCAGAGGATCCCACC...GACAAAAAGCATAAGTCCCACAAACTCCCTAGCGGTGTGTATGTGTGTGTGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR CAA 90 bp ACACACACACACATACACACCGCTAGGGAGTTTGTGGGACTTATGCTTTTTGTCCAGGCCACAGAGCCCTaGGGAACAGAGTTGGCTGAG +
Preference number: 5 (lower is better)
Translates to: THTHIHTAREFVGLMLFVQATEP*GTELAE
Trigger: CTCAGCCAACTCTGTTCCCAAGGGCTCTGTGGCCTG...GACAAAAAGCATAAGTCCCACAAACTCCCTAGCGGTGTGTATGTGTGTGTGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS TCA 90 bp GTTCCTGGATCTCCAACCTCATCCTCCCTCAGGAGCACAACATGCTaGGTACTGAGTCTTGGATGTCCTGACAAAGTAATGTCCCTCCTC +
Preference number: 5 (lower is better)
Translates to: VPGSPTSSSLRSTTC*VLSLGCPDKVMSLL
Trigger: GAGGAGGGACATTACTTTGTCAGGACATCCAAGACTCAGTACTCAGCATGTTGTGCTCCTGAGGGAGGATGAGGTTGGAGATCCAGGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273146.6
ENST00000430121.3
ENST00000434206.1
CDS CCA 90 bp TGGCTTTTCCCATTTGTCCTCAAGATGAGTGAGCCCAAGAAAATGTaGCCATCAGGATGGATGCTCATTGACTCAGGGCTGTGTGCGGCT +
Preference number: 5 (lower is better)
Translates to: WLFPFVLKMSEPKKM*PSGWMLIDSGLCAA
Trigger: AGCCGCACACAGCCCTGAGTCAATGAGCATCCATCCTGATGGCCACATTTTCTTGGGCTCACTCATCTTGAGGACAAATGGGAAAAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273146.6
ENST00000430121.3
CDS CCA 90 bp ACACACCATTCTCAAACTCTACTTCCAGGAGCCCTAGTTGTTCCCTaGAGTCTCTTAGGGGCAGTGGAGACAGTGAAAACAAGGCTCCAG +
Preference number: 5 (lower is better)
Translates to: THHSQTLLPGALVVP*SLLGAVETVKTRLQ
Trigger: CTGGAGCCTTGTTTTCACTGTCTCCACTGCCCCTAAGAGACTCCAGGGAACAACTAGGGCTCCTGGAAGTAGAGTTTGAGAATGGTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434206.1
ENST00000492161.1
CDS-3UTR CAA 90 bp TCCTTGGAAAGAACTCCACCATCCCAGGCAGGTGAAATATCCCGTGACATCCTTTGTGAGGTTGTGCTTTaGGATGTGTCCCAGCAGCAC +
Preference number: 5 (lower is better)
Translates to: SLERTPPSQAGEISRDILCEVVL*DVSQQH
Trigger: GTGCTGCTGGGACACATCCAAAAGCACAACCTCACA...AAGGATGTCACGGGATATTTCACCTGCCTGGGATGGTGGAGTTCTTTCCAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273146.6
CDS-3UTR CAA 90 bp TCAGCCAGAGCAACTCCAGGCTGCAAGTGCAGTTCTATGAAGATTGTACCTTTACAGGATGGATGCTCATaGACTCAGGGCTGTGTGCGG +
Preference number: 5 (lower is better)
Translates to: SARATPGCKCSSMKIVPLQDGCS*TQGCVR
Trigger: CCGCACACAGCCCTGAGTCAATGAGCATCCATCCTG...TAAAGGTACAATCTTCATAGAACTGCACTTGCAGCCTGGAGTTGCTCTGGCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR CAA 90 bp CCAAGAAAATGTGGCCATCAGGATGGATGCTCATTGACTCAGGGCTGTGTGCGGAGGGACGCTTTGAGATaGAAAACCCCATACTACCTC +
Preference number: 5 (lower is better)
Translates to: PRKCGHQDGCSLTQGCVRRDALR*KTPYYL
Trigger: GAGGTAGTATGGGGTTTTCAATCTCAAAGCGTCCCT...CCGCACACAGCCCTGAGTCAATGAGCATCCATCCTGATGGCCACATTTTCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR CAA 90 bp TTGCCATTTTCTAGGATGACAAGTGTCTCACTCCCACCTCTGGCTGAGTGTAGGCTGAAGAGTGTGAGGTaGTGCTTTTGGATGTGTCCC +
Preference number: 5 (lower is better)
Translates to: LPFSRMTSVSLPPLAECRLKSVR*CFWMCP
Trigger: GGGACACATCCAAAAGCACAACCTCACACTCTTCAG...CCTACACTCAGCCAGAGGTGGGAGTGAGACACTTGTCATCCTAGAAAATGGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273146.6
CDS-3UTR CAA 90 bp GACAGGATTAGATCTGTTTTATTTCAAAGCGGCTGGTTAAGTCACAAAGTAGAACCTGCCGGATATGGGTaGCAGGGGCGCCAGTTACCC +
Preference number: 5 (lower is better)
Translates to: DRIRSVLFQSGWLSHKVEPAGYG*QGRQLP
Trigger: GGGTAACTGGCGCCCCTGCAACCCATATCCGGCAGG...TTCTACTTTGTGACTTAACCAGCCGCTTTGAAATAAAACAGATCTAATCCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273146.6
CDS TCA 90 bp TCCCTCCAGACTGCAATTCCTCATTTACTGGCACAACGAGGATGTTaGCTAGACACACCATTCTCAAACTCTACTTCCAGGAGCCCTAGT +
Preference number: 5 (lower is better)
Translates to: SLQTAIPHLLAQRGC*LDTPFSNSTSRSPS
Trigger: ACTAGGGCTCCTGGAAGTAGAGTTTGAGAATGGTGTGTCTAGTCAACATCCTCGTTGTGCCAGTAAATGAGGAATTGCAGTCTGGAGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434206.1
ENST00000492161.1
CDS-3UTR CAA 90 bp CAGAGACTGTTAAACAGAAACTGGCTGAGGCCTAGAGGAACAGCATCACTTGATGTCTACTCGGGACTTTaGCAGAGTTTGCAAAGTCCC +
Preference number: 5 (lower is better)
Translates to: QRLLNRNWLRPRGTASLDVYSGL*QSLQSP
Trigger: GGGACTTTGCAAACTCTGCAAAAGTCCCGAGTAGAC...ATCAAGTGATGCTGTTCCTCTAGGCCTCAGCCAGTTTCTGTTTAACAGTCTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273146.6
CDS-3UTR CAA 90 bp AAGATGAGTGAGCCCAAGAAAATGTGGCCATCAGGATGGATGCTCATTGACTCACTGAAGAGTGTGAGGTaGTGCTTTTGGATGTGTCCC +
Preference number: 5 (lower is better)
Translates to: KMSEPKKMWPSGWMLIDSLKSVR*CFWMCP
Trigger: GGGACACATCCAAAAGCACAACCTCACACTCTTCAG...TGAGTCAATGAGCATCCATCCTGATGGCCACATTTTCTTGGGCTCACTCATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273146.6
ENST00000430121.3
CDS-3UTR CAA 90 bp TTGGAAAGAACTCCACCATCCCAGGCAGGTGAAATATCCCGTGACATCCTTGTGTTGATAAGGGTATCCTaGGAAAGAACTCCACCATCC +
Preference number: 5 (lower is better)
Translates to: LERTPPSQAGEISRDILVLIRVS*ERTPPS
Trigger: GGATGGTGGAGTTCTTTCCAAGGATACCCTTATCAA...CACAAGGATGTCACGGGATATTTCACCTGCCTGGGATGGTGGAGTTCTTTCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273146.6
CDS-3UTR CAA 90 bp TCTACCAGGCAGAAGGCAAAGCAGAGACTGTTAAACAGAAACTGGCTGAGGCCTTATGTAGTTTGGGCATaGTCCACTTGCATGTCAGTC +
Preference number: 5 (lower is better)
Translates to: STRQKAKQRLLNRNWLRPYVVWA*STCMSV
Trigger: GACTGACATGCAAGTGGACAATGCCCAAACTACATA...AGGCCTCAGCCAGTTTCTGTTTAACAGTCTCTGCTTTGCCTTCTGCCTGGTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273146.6
CDS-3UTR CAA 90 bp GTGGATAGAGTTTTATTATTATATGTAGTTTGGGCATTGTCCACTTGCATGTCAATCACTGGCCGCCTCTaGCCACGCAGCTTTCTCCGG +
Preference number: 5 (lower is better)
Translates to: VDRVLLLYVVWALSTCMSITGRL*PRSFLR
Trigger: CCGGAGAAAGCTGCGTGGCAAGAGGCGGCCAGTGAT...TGACATGCAAGTGGACAATGCCCAAACTACATATAATAATAAAACTCTATCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273146.6
CDS-3UTR CAA 90 bp ACTCTGCATATGCACGTGCATCACACATTTTTACAGTTTCTTGAGCAGCTCACATGTGAGGTTGTGCTTTaGGATGTGTCCCAGCAGCAC +
Preference number: 5 (lower is better)
Translates to: TLHMHVHHTFLQFLEQLTCEVVL*DVSQQH
Trigger: GTGCTGCTGGGACACATCCAAAAGCACAACCTCACA...TGTGAGCTGCTCAAGAAACTGTAAAAATGTGTGATGCACGTGCATATGCAGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR CAA 90 bp ATGAAGATTGTACCTTTATTAGGTTGGTCTCAGGTATTGCATGCAGGCGGGCACTGTACCTTTATTAGGTaGGTCTCAGGTATTGCATGC +
Preference number: 5 (lower is better)
Translates to: MKIVPLLGWSQVLHAGGHCTFIR*VSGIAC
Trigger: GCATGCAATACCTGAGACCAACCTAATAAAGGTACA...GTGCCCGCCTGCATGCAATACCTGAGACCAACCTAATAAAGGTACAATCTTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR CAA 90 bp TTGAGCAGCTCACAGAACATTTTCGAATGTATTTGTTGGTGCAAGGGAATAAATGAATGCCCATACCCTTaGCCCCAGAAATCCCGTACG +
Preference number: 5 (lower is better)
Translates to: LSSSQNIFECICWCKGINECPYP*PQKSRT
Trigger: CGTACGGGATTTCTGGGGCAAAGGGTATGGGCATTC...ATTTATTCCCTTGCACCAACAAATACATTCGAAAATGTTCTGTGAGCTGCTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR CAA 90 bp GTCCTCAAGATGAGTGAGCCCAAGAAAATGTGGCCATCAGGATGGATGCTCATTTGTATTCCTTTCTTCTaGCCATTTTCTAGGATGACA +
Preference number: 5 (lower is better)
Translates to: VLKMSEPKKMWPSGWMLICIPFF*PFSRMT
Trigger: TGTCATCCTAGAAAATGGCAAGAAGAAAGGAATACA...AATGAGCATCCATCCTGATGGCCACATTTTCTTGGGCTCACTCATCTTGAGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273146.6
CDS-3UTR CAA 90 bp ACACACACACACATACACACCGCTAGGGAGTTTGTGGGACTTATGCTTTTTGTCTGGGAGAAATGTAAATaGACACCACCATTTCAGAGA +
Preference number: 5 (lower is better)
Translates to: THTHIHTAREFVGLMLFVWEKCK*TPPFQR
Trigger: TCTCTGAAATGGTGGTGTCAATTTACATTTCTCCCA...GACAAAAAGCATAAGTCCCACAAACTCCCTAGCGGTGTGTATGTGTGTGTGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR CAA 90 bp GTCCTCAAGATGAGTGAGCCCAAGAAAATGTGGCCATCAGGATGGATGCTCATTTCAGCAGAGAAAAGATaGATCACACTTATTAGAGTC +
Preference number: 5 (lower is better)
Translates to: VLKMSEPKKMWPSGWMLISAEKR*ITLIRV
Trigger: GACTCTAATAAGTGTGATCAATCTTTTCTCTGCTGA...AATGAGCATCCATCCTGATGGCCACATTTTCTTGGGCTCACTCATCTTGAGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR CAA 90 bp AAGATGAGTGAGCCCAAGAAAATGTGGCCATCAGGATGGATGCTCATTGACTCAATTTCAGAGAGCAATTaGGCAGTTTCTCTCAGAATA +
Preference number: 5 (lower is better)
Translates to: KMSEPKKMWPSGWMLIDSISESN*AVSLRI
Trigger: TATTCTGAGAGAAACTGCCAAATTGCTCTCTGAAAT...TGAGTCAATGAGCATCCATCCTGATGGCCACATTTTCTTGGGCTCACTCATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR CAA 90 bp TTGAGCAGCTCACAGAACATTTTCGAATGTATTTGTTGGTGCAAGGGAATAAATGCAGAAAGGGACGCTTaGAGATTGAAAACCCCATAC +
Preference number: 5 (lower is better)
Translates to: LSSSQNIFECICWCKGINAERDA*RLKTPY
Trigger: GTATGGGGTTTTCAATCTCAAAGCGTCCCTTTCTGC...ATTTATTCCCTTGCACCAACAAATACATTCGAAAATGTTCTGTGAGCTGCTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS-3UTR CAA 90 bp TTGAGCAGCTCACAGAACATTTTCGAATGTATTTGTTGGTGCAAGGGAATAAATACACCGCTAGGGAGTTaGTGGGACTTATGCTTTTTG +
Preference number: 5 (lower is better)
Translates to: LSSSQNIFECICWCKGINTPLGS*WDLCFL
Trigger: CAAAAAGCATAAGTCCCACAAACTCCCTAGCGGTGT...ATTTATTCCCTTGCACCAACAAATACATTCGAAAATGTTCTGTGAGCTGCTCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430121.3
CDS GCA 90 bp TCCTCAGGCACATTCTTAAAGCTCCATTTTGTCAGCTTTATATATTaGGGACTCCTGGAAATATTCAAACAACTGGTTCTGCTGCTGAAA +
Preference number: 5 (lower is better)
Translates to: SSGTFLKLHFVSFIY*GLLEIFKQLVLLLK
Trigger: TTTCAGCAGCAGAACCAGTTGTTTGAATATTTCCAGGAGTCCGCAATATATAAAGCTGACAAAATGGAGCTTTAAGAATGTGCCTGAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434206.1
ENST00000492161.1
CDS-3UTR CAA 90 bp GTGGATAGAGTTTTATTATTATATGTAGTTTGGGCATTGTCCACTTGCATGTCAGAGGAACAGCATCACTaGATAAGGGTATCCTTGGAA +
Preference number: 5 (lower is better)
Translates to: VDRVLLLYVVWALSTCMSEEQHH*IRVSLE
Trigger: TTCCAAGGATACCCTTATCAAGTGATGCTGTTCCTC...TGACATGCAAGTGGACAATGCCCAAACTACATATAATAATAAAACTCTATCCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273146.6
CDS CCA 72 bp CGCTCAGCCGGCTCGCAGACTCATCCCGCCTCCCCTTaGCCGCCCCCGGCGCCGTGGCTCGCCAGGCTTCCC +
Preference number: 6 (lower is better)
Translates to: RSAGSQTHPASP*PPPAPWLARLP
Trigger: GGGAAGCCTGGCGAGCCACGGCGCCGGGGGCGGCCAAGGGGAGGCGGGATGAGTCTGCGAGCCGGCTGAGCG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000273146.6
ENST00000430121.3
ENST00000488863.5
ENST00000492161.1
CDS GCA 72 bp CGCCCCCGGCGCCGTGGCTCGCCAGGCTTCCCAGGATaGGCGGCTACTCGGCTGGGGCGGGTTTCCCGGACT +
Preference number: 6 (lower is better)
Translates to: RPRRRGSPGFPG*AATRLGRVSRT
Trigger: AGTCCGGGAAACCCGCCCCAGCCGAGTAGCCGCGCATCCTGGGAAGCCTGGCGAGCCACGGCGCCGGGGGCG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000273146.6
ENST00000430121.3
ENST00000488863.5
ENST00000492161.1
CDS CCA 72 bp CTGAGGCTCCATGGGACCAGGGTCTGGGCCGGCGGATaGACGCTGTGGGGGAAAGCGGGTGACAGCCATCGC +
Preference number: 6 (lower is better)
Translates to: LRLHGTRVWAGG*TLWGKAGDSHR
Trigger: GCGATGGCTGTCACCCGCTTTCCCCCACAGCGTCCATCCGCCGGCCCAGACCCTGGTCCCATGGAGCCTCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273146.6
ENST00000430121.3
ENST00000434206.1
CDS CCA 72 bp GCCAGTTACCCCCTGAGGCTCCATGGGACCAGGGTCTaGGCCGGCGGATGGACGCTGTGGGGGAAAGCGGGT +
Preference number: 6 (lower is better)
Translates to: ASYPLRLHGTRV*AGGWTLWGKAG
Trigger: ACCCGCTTTCCCCCACAGCGTCCATCCGCCGGCCCAGACCCTGGTCCCATGGAGCCTCAGGGGGTAACTGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000273146.6
ENST00000430121.3
ENST00000434206.1
CDS CCA 72 bp AAGTCGAAGAGCGCCAGGCGTGCCCACTCGGTATGGTaGATGCCCGGGCACGGGGCCTGGCCTGGCCAGTTG +
Preference number: 6 (lower is better)
Translates to: KSKSARRAHSVW*MPGHGAWPGQL
Trigger: CAACTGGCCAGGCCAGGCCCCGTGCCCGGGCATCCACCATACCGAGTGGGCACGCCTGGCGCTCTTCGACTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273146.6
ENST00000430121.3
ENST00000434206.1
CDS CAA 90 bp CCGCGGCCGCGAGCCTCTGCGGTCTACTCGGGACTTTTGCAGAGTTaGCAAAGTCCCTGCCGCGCGTCCCGGCCCAGCTTCCCCATTCCC +
Preference number: 6 (lower is better)
Translates to: PRPRASAVYSGLLQS*QSPCRASRPSFPIP
Trigger: GGGAATGGGGAAGCTGGGCCGGGACGCGCGGCAGGGACTTTGCAAACTCTGCAAAAGTCCCGAGTAGACCGCAGAGGCTCGCGGCCGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273146.6
CDS CAA 90 bp GGAGCCTACCCGCGGCCGCGAGCCTCTGCGGTCTACTCGGGACTTTaGCAGAGTTTGCAAAGTCCCTGCCGCGCGTCCCGGCCCAGCTTC +
Preference number: 6 (lower is better)
Translates to: GAYPRPRASAVYSGL*QSLQSPCRASRPSF
Trigger: GAAGCTGGGCCGGGACGCGCGGCAGGGACTTTGCAAACTCTGCAAAAGTCCCGAGTAGACCGCAGAGGCTCGCGGCCGCGGGTAGGCTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273146.6
ENST00000488863.5
CDS GCA 72 bp CGCGGCCGCGAGCCTCTGCGGTCTACTCGGGACTTTTaGAGAGTTTGCAAAGTCCCTGCCGCGCGTCCCGGC +
Preference number: 6 (lower is better)
Translates to: RGREPLRSTRDF*RVCKVPAARPG
Trigger: GCCGGGACGCGCGGCAGGGACTTTGCAAACTCTGCAAAAGTCCCGAGTAGACCGCAGAGGCTCGCGGCCGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273146.6
ENST00000488863.5
CDS GCA 72 bp GTGGACCTGCAACAGGAAGTCGAAGAGCGCCAGGCGTaGCCACTCGGTATGGTGGATGCCCGGGCACGGGGC +
Preference number: 6 (lower is better)
Translates to: VDLQQEVEERQA*PLGMVDARARG
Trigger: GCCCCGTGCCCGGGCATCCACCATACCGAGTGGGCACGCCTGGCGCTCTTCGACTTCCTGTTGCAGGTCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273146.6
ENST00000430121.3
ENST00000434206.1
CDS CCA 72 bp GCTCGCCAGGCTTCCCAGGATGCGCGGCTACTCGGCTaGGGCGGGTTTCCCGGACTGAAGGTGCACACGTTC +
Preference number: 6 (lower is better)
Translates to: ARQASQDARLLG*GGFPGLKVHTF
Trigger: GAACGTGTGCACCTTCAGTCCGGGAAACCCGCCCCAGCCGAGTAGCCGCGCATCCTGGGAAGCCTGGCGAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273146.6
ENST00000430121.3
ENST00000488863.5
ENST00000492161.1
CDS CAA 90 bp TTGCCCGCTGCCTCCGGCTGGAGCTCAAAGCCTGCCGGATATGGGTaGCAGGGGCGCCAGTTACCCCCTGAGGCTCCATGGGACCAGGGT +
Preference number: 6 (lower is better)
Translates to: LPAASGWSSKPAGYG*QGRQLPPEAPWDQG
Trigger: ACCCTGGTCCCATGGAGCCTCAGGGGGTAACTGGCGCCCCTGCAACCCATATCCGGCAGGCTTTGAGCTCCAGCCGGAGGCAGCGGGCAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273146.6
ENST00000430121.3
ENST00000434206.1
CDS GCA 72 bp CCTCCGGCTGGAGCTCAAAGCCTGCCGGATATGGGTTaGAGGGGCGCCAGTTACCCCCTGAGGCTCCATGGG +
Preference number: 6 (lower is better)
Translates to: PPAGAQSLPDMG*RGASYPLRLHG
Trigger: CCCATGGAGCCTCAGGGGGTAACTGGCGCCCCTGCAACCCATATCCGGCAGGCTTTGAGCTCCAGCCGGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273146.6
ENST00000430121.3
ENST00000434206.1
CDS GCA 72 bp AGCACCTGTCCTCGCTGCTCCAGGGTCTGGAGGACCTaGTTCAGCCCCTGGGCTCCGCCTTGGCTTTCCCAG +
Preference number: 6 (lower is better)
Translates to: STCPRCSRVWRT*FSPWAPPWLSQ
Trigger: CTGGGAAAGCCAAGGCGGAGCCCAGGGGCTGAAGCAGGTCCTCCAGACCCTGGAGCAGCGAGGACAGGTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273146.6
ENST00000430121.3
ENST00000488863.5
CDS CCA 72 bp GCCTCAGTGGAGAAGCCAACCTGTAGCACCTGCCCATaGGCGGGGACCCTGGCTTTGTCCACCACCTCCCCC +
Preference number: 6 (lower is better)
Translates to: ASVEKPTCSTCP*AGTLALSTTSP
Trigger: GGGGGAGGTGGTGGACAAAGCCAGGGTCCCCGCCCATGGGCAGGTGCTACAGGTTGGCTTCTCCACTGAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273146.6
ENST00000430121.3
ENST00000434206.1
CDS TCA 72 bp ATGCGCGGCTACTCGGCTGGGGCGGGTTTCCCGGACTaGAGGTGCACACGTTCTCTGCAGCCAAGTGGCCCT +
Preference number: 6 (lower is better)
Translates to: MRGYSAGAGFPD*RCTRSLQPSGP
Trigger: AGGGCCACTTGGCTGCAGAGAACGTGTGCACCTTCAGTCCGGGAAACCCGCCCCAGCCGAGTAGCCGCGCAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273146.6
ENST00000430121.3
ENST00000488863.5
ENST00000492161.1
CDS GCA 72 bp AGCCAAGTGGCCCTGCGCCAACTCTCGGGAGATCGCTaGACACCGGGATACTCCGCGGGTGGGGAATACACG +
Preference number: 6 (lower is better)
Translates to: SQVALRQLSGDR*TPGYSAGGEYT
Trigger: CGTGTATTCCCCACCCGCGGAGTATCCCGGTGTGCAGCGATCTCCCGAGAGTTGGCGCAGGGCCACTTGGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273146.6
ENST00000430121.3
ENST00000488863.5
ENST00000492161.1
CDS GCA 72 bp TTTCTTGCCCGCTGCCTCCGGCTGGAGCTCAAAGCCTaGCGGATATGGGTTGCAGGGGCGCCAGTTACCCCC +
Preference number: 6 (lower is better)
Translates to: FLARCLRLELKA*RIWVAGAPVTP
Trigger: GGGGGTAACTGGCGCCCCTGCAACCCATATCCGGCAGGCTTTGAGCTCCAGCCGGAGGCAGCGGGCAAGAAA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273146.6
ENST00000430121.3
ENST00000434206.1
CDS GCA 72 bp AGGGCAGCCTCAGTGGAGAAGCCAACCTGTAGCACCTaGCCATGGGCGGGGACCCTGGCTTTGTCCACCACC +
Preference number: 6 (lower is better)
Translates to: RAASVEKPTCST*PWAGTLALSTT
Trigger: GGTGGTGGACAAAGCCAGGGTCCCCGCCCATGGGCAGGTGCTACAGGTTGGCTTCTCCACTGAGGCTGCCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273146.6
ENST00000430121.3
ENST00000434206.1
CDS CCA 72 bp GCCTGGGAGAGGACAGGTCCTGAAGGGCAGCCTCAGTaGAGAAGCCAACCTGTAGCACCTGCCCATGGGCGG +
Preference number: 6 (lower is better)
Translates to: AWERTGPEGQPQ*RSQPVAPAHGR
Trigger: CCGCCCATGGGCAGGTGCTACAGGTTGGCTTCTCCACTGAGGCTGCCCTTCAGGACCTGTCCTCTCCCAGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273146.6
ENST00000430121.3
ENST00000434206.1
CDS TCA 72 bp GAATACACGCCGGATCTACTGAGATCTACGGGGATCTaGGGGAGCCTACCCGCGGCCGCGAGCCTCTGCGGT +
Preference number: 6 (lower is better)
Translates to: EYTPDLLRSTGI*GSLPAAASLCG
Trigger: ACCGCAGAGGCTCGCGGCCGCGGGTAGGCTCCCTCAGATCCCCGTAGATCTCAGTAGATCCGGCGTGTATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273146.6
ENST00000430121.3
ENST00000488863.5
ENST00000492161.1
CDS GCA 72 bp GGGCGGGTTTCCCGGACTGAAGGTGCACACGTTCTCTaGAGCCAAGTGGCCCTGCGCCAACTCTCGGGAGAT +
Preference number: 6 (lower is better)
Translates to: GRVSRTEGAHVL*SQVALRQLSGD
Trigger: ATCTCCCGAGAGTTGGCGCAGGGCCACTTGGCTGCAGAGAACGTGTGCACCTTCAGTCCGGGAAACCCGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273146.6
ENST00000430121.3
ENST00000488863.5
ENST00000492161.1
CDS GCA 72 bp GGGCAAAGCACGGCTTCTCCAGAAGCCCATGTTTCTTaGCCGCTGCCTCCGGCTGGAGCTCAAAGCCTGCCG +
Preference number: 6 (lower is better)
Translates to: GQSTASPEAHVS*PLPPAGAQSLP
Trigger: CGGCAGGCTTTGAGCTCCAGCCGGAGGCAGCGGGCAAGAAACATGGGCTTCTGGAGAAGCCGTGCTTTGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273146.6
ENST00000430121.3
ENST00000434206.1
CDS GCA 72 bp GGCGGGGACCCTGGCTTTGTCCACCACCTCCCCCTGTaGCAACAGACGGAGCATCTGCACATCGTGGTCTGT +
Preference number: 6 (lower is better)
Translates to: GGDPGFVHHLPL*QQTEHLHIVVC
Trigger: ACAGACCACGATGTGCAGATGCTCCGTCTGTTGGCACAGGGGGAGGTGGTGGACAAAGCCAGGGTCCCCGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273146.6
ENST00000430121.3
ENST00000434206.1
CDS GCA 72 bp GTGCTGCACATCGGGTGCCCACCAGATGACAGGCCTTaGTCCACCGTCTGTGTATCGGTAGGGCAGGAGGGG +
Preference number: 6 (lower is better)
Translates to: VLHIGCPPDDRP*STVCVSVGQEG
Trigger: CCCCTCCTGCCCTACCGATACACAGACGGTGGAGCAAGGCCTGTCATCTGGTGGGCACCCGATGTGCAGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273146.6
ENST00000430121.3
ENST00000434206.1
CDS CCA 72 bp CCCGGACTGAAGGTGCACACGTTCTCTGCAGCCAAGTaGCCCTGCGCCAACTCTCGGGAGATCGCTGCACAC +
Preference number: 6 (lower is better)
Translates to: PGLKVHTFSAAK*PCANSREIAAH
Trigger: GTGTGCAGCGATCTCCCGAGAGTTGGCGCAGGGCCACTTGGCTGCAGAGAACGTGTGCACCTTCAGTCCGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273146.6
ENST00000430121.3
ENST00000488863.5
ENST00000492161.1
CDS CCA 72 bp GGACTGACCAGGGTGACCACCTCACTCTGTGTCTCCTaGATGGGACTGCCATGCTGGGGGTGGCCCAGGTCT +
Preference number: 6 (lower is better)
Translates to: GLTRVTTSLCVS*MGLPCWGWPRS
Trigger: AGACCTGGGCCACCCCCAGCATGGCAGTCCCATCCAGGAGACACAGAGTGAGGTGGTCACCCTGGTCAGTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273146.6
ENST00000430121.3
ENST00000434206.1
CDS CCA 72 bp TCCCCCTGTGCCAACAGACGGAGCATCTGCACATCGTaGTCTGTCAGCCATGGGGGAGCCTGCCCACCAGTC +
Preference number: 6 (lower is better)
Translates to: SPCANRRSICTS*SVSHGGACPPV
Trigger: GACTGGTGGGCAGGCTCCCCCATGGCTGACAGACCACGATGTGCAGATGCTCCGTCTGTTGGCACAGGGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000273146.6
ENST00000430121.3
ENST00000434206.1
CDS CAA 72 bp CGAGCCTCTGCGGTCTACTCGGGACTTTTGCAGAGTTaGCAAAGTCCCTGCCGCGCGTCCCGGCCCAGCTTC +
Preference number: 6 (lower is better)
Translates to: RASAVYSGLLQS*QSPCRASRPSF
Trigger: GAAGCTGGGCCGGGACGCGCGGCAGGGACTTTGCAAACTCTGCAAAAGTCCCGAGTAGACCGCAGAGGCTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273146.6
ENST00000488863.5
CDS CAA 90 bp GCAGATAGGATCATCAAGAGGCAGAACGCTATCACTGGCCGCCTCTaGCCACGCAGCTTTCTCCGGAGCCAAGACGCCCGCGGCCGCGAG +
Preference number: 6 (lower is better)
Translates to: ADRIIKRQNAITGRL*PRSFLRSQDARGRE
Trigger: CTCGCGGCCGCGGGCGTCTTGGCTCCGGAGAAAGCTGCGTGGCAAGAGGCGGCCAGTGATAGCGTTCTGCCTCTTGATGATCCTATCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434206.1
CDS TCA 72 bp GATACTCCGCGGGTGGGGAATACACGCCGGATCTACTaGGATCTACGGGGATCTGAGGGAGCCTACCCGCGG +
Preference number: 6 (lower is better)
Translates to: DTPRVGNTRRIY*DLRGSEGAYPR
Trigger: CCGCGGGTAGGCTCCCTCAGATCCCCGTAGATCTCAGTAGATCCGGCGTGTATTCCCCACCCGCGGAGTATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273146.6
ENST00000430121.3
ENST00000488863.5
ENST00000492161.1
CDS TCA 72 bp GGTCGCTCAGGTGCTGCACATCGGGTGCCCACCAGATaGCAGGCCTTGCTCCACCGTCTGTGTATCGGTAGG +
Preference number: 6 (lower is better)
Translates to: GRSGAAHRVPTR*QALLHRLCIGR
Trigger: CCTACCGATACACAGACGGTGGAGCAAGGCCTGTCATCTGGTGGGCACCCGATGTGCAGCACCTGAGCGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273146.6
ENST00000430121.3
ENST00000434206.1
CDS GCA 72 bp CTGAAGGTGCACACGTTCTCTGCAGCCAAGTGGCCCTaGGCCAACTCTCGGGAGATCGCTGCACACCGGGAT +
Preference number: 6 (lower is better)
Translates to: LKVHTFSAAKWP*ANSREIAAHRD
Trigger: ATCCCGGTGTGCAGCGATCTCCCGAGAGTTGGCGCAGGGCCACTTGGCTGCAGAGAACGTGTGCACCTTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273146.6
ENST00000430121.3
ENST00000488863.5
ENST00000492161.1
CDS GCA 72 bp TCATCAAGAGGCAGAACGCTATCACTGGCCGCCTCTTaGCACGCAGCTTTCTCCGGAGCCAAGACGCCCGCG +
Preference number: 6 (lower is better)
Translates to: SSRGRTLSLAAS*HAAFSGAKTPA
Trigger: CGCGGGCGTCTTGGCTCCGGAGAAAGCTGCGTGGCAAGAGGCGGCCAGTGATAGCGTTCTGCCTCTTGATGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434206.1
CDS CCA 72 bp TCCAGAAGCCCATGTTTCTTGCCCGCTGCCTCCGGCTaGAGCTCAAAGCCTGCCGGATATGGGTTGCAGGGG +
Preference number: 6 (lower is better)
Translates to: SRSPCFLPAASG*SSKPAGYGLQG
Trigger: CCCCTGCAACCCATATCCGGCAGGCTTTGAGCTCCAGCCGGAGGCAGCGGGCAAGAAACATGGGCTTCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273146.6
ENST00000430121.3
ENST00000434206.1
CDS CCA 72 bp CAGCCAGCCCAAGGCCAGAGAGTTCTGATCCTCATCTaGGTCGCTCAGGTGCTGCACATCGGGTGCCCACCA +
Preference number: 6 (lower is better)
Translates to: QPAQGQRVLILI*VAQVLHIGCPP
Trigger: TGGTGGGCACCCGATGTGCAGCACCTGAGCGACCCAGATGAGGATCAGAACTCTCTGGCCTTGGGCTGGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273146.6
ENST00000430121.3
ENST00000434206.1
CDS CAA 72 bp TGGGCAAAGCACGGCTTCTCCAGAAGCCCATGTTTCTaGCCCGCTGCCTCCGGCTGGAGCTCAAAGCCTGCC +
Preference number: 6 (lower is better)
Translates to: WAKHGFSRSPCF*PAASGWSSKPA
Trigger: GGCAGGCTTTGAGCTCCAGCCGGAGGCAGCGGGCAAGAAACATGGGCTTCTGGAGAAGCCGTGCTTTGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273146.6
ENST00000430121.3
ENST00000434206.1
CDS CAA 90 bp GCAGATAGGATCATCAAGAGGCAGAACGCTATCACTGGCCGCCTCTaGCCACGCAGCTTTCTCCGGAGCCAAGACGCCATGTCCCCGGCG +
Preference number: 6 (lower is better)
Translates to: ADRIIKRQNAITGRL*PRSFLRSQDAMSPA
Trigger: CGCCGGGGACATGGCGTCTTGGCTCCGGAGAAAGCTGCGTGGCAAGAGGCGGCCAGTGATAGCGTTCTGCCTCTTGATGATCCTATCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273146.6
ENST00000430121.3
CDS CAA 90 bp TGGAGTTCCTGGGCAAAGCACGGCTTCTCCAGAAGCCCATGTTTCTaGCCCGCTGCCTCCGGCTGGAGCTCAAAGCCTGCCGGATATGGG +
Preference number: 6 (lower is better)
Translates to: WSSWAKHGFSRSPCF*PAASGWSSKPAGYG
Trigger: CCCATATCCGGCAGGCTTTGAGCTCCAGCCGGAGGCAGCGGGCAAGAAACATGGGCTTCTGGAGAAGCCGTGCTTTGCCCAGGAACTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273146.6
ENST00000430121.3
ENST00000434206.1
CDS GCA 72 bp TCAGCCATGGGGGAGCCTGCCCACCAGTCCTCGAGCTaGTCAACAGCGTCTCAGCATCACACCATACTGACC +
Preference number: 6 (lower is better)
Translates to: SAMGEPAHQSSS*STASQHHTILT
Trigger: GGTCAGTATGGTGTGATGCTGAGACGCTGTTGAGCAGCTCGAGGACTGGTGGGCAGGCTCCCCCATGGCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273146.6
ENST00000430121.3
ENST00000434206.1
CDS GCA 72 bp ATCCTCATCTGGGTCGCTCAGGTGCTGCACATCGGGTaGCCACCAGATGACAGGCCTTGCTCCACCGTCTGT +
Preference number: 6 (lower is better)
Translates to: ILIWVAQVLHIG*PPDDRPCSTVC
Trigger: ACAGACGGTGGAGCAAGGCCTGTCATCTGGTGGGCACCCGATGTGCAGCACCTGAGCGACCCAGATGAGGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273146.6
ENST00000430121.3
ENST00000434206.1
CDS CCA 72 bp GGATGGGACTGCCATGCTGGGGGTGGCCCAGGTCTTTaGTTCCTGGATCTCCAACCTCATCCTCCCTCAGGA +
Preference number: 6 (lower is better)
Translates to: GWDCHAGGGPGL*FLDLQPHPPSG
Trigger: TCCTGAGGGAGGATGAGGTTGGAGATCCAGGAACCAAAGACCTGGGCCACCCCCAGCATGGCAGTCCCATCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273146.6
ENST00000430121.3
ENST00000434206.1
CDS CCA 72 bp CAGCCCCTGGGCTCCGCCTTGGCTTTCCCAGAACACTaGGTCCATCTGCAGCGACTTCAGCAGCATGTTCTG +
Preference number: 6 (lower is better)
Translates to: QPLGSALAFPEH*VHLQRLQQHVL
Trigger: CAGAACATGCTGCTGAAGTCGCTGCAGATGGACCCAGTGTTCTGGGAAAGCCAAGGCGGAGCCCAGGGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273146.6
ENST00000430121.3
ENST00000488863.5
CDS CCA 72 bp GAGACGTACCAGGATGTGGACCAGCCGCAGCTCGGCTaGGTTCTGGCATTTCTCTCGGAGCCTCTCTTCCAC +
Preference number: 6 (lower is better)
Translates to: ETYQDVDQPQLG*VLAFLSEPLFH
Trigger: GTGGAAGAGAGGCTCCGAGAGAAATGCCAGAACCCAGCCGAGCTGCGGCTGGTCCACATCCTGGTACGTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434206.1
ENST00000492161.1
CDS CCA 72 bp GACAAGGGGATGGTGTGGAGGAGACGTACCAGGATGTaGACCAGCCGCAGCTCGGCTGGGTTCTGGCATTTC +
Preference number: 6 (lower is better)
Translates to: DKGMVWRRRTRM*TSRSSAGFWHF
Trigger: GAAATGCCAGAACCCAGCCGAGCTGCGGCTGGTCCACATCCTGGTACGTCTCCTCCACACCATCCCCTTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434206.1
ENST00000492161.1
CDS CCA 72 bp AGAAAGACCTGGGTCTGGGGTGACAAGGGGATGGTGTaGAGGAGACGTACCAGGATGTGGACCAGCCGCAGC +
Preference number: 6 (lower is better)
Translates to: RKTWVWGDKGMV*RRRTRMWTSRS
Trigger: GCTGCGGCTGGTCCACATCCTGGTACGTCTCCTCCACACCATCCCCTTGTCACCCCAGACCCAGGTCTTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434206.1
ENST00000492161.1
CDS CAA 72 bp TGGATGGGACTGCCATGCTGGGGGTGGCCCAGGTCTTaGGTTCCTGGATCTCCAACCTCATCCTCCCTCAGG +
Preference number: 6 (lower is better)
Translates to: WMGLPCWGWPRS*VPGSPTSSSLR
Trigger: CCTGAGGGAGGATGAGGTTGGAGATCCAGGAACCAAAGACCTGGGCCACCCCCAGCATGGCAGTCCCATCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273146.6
ENST00000430121.3
ENST00000434206.1
CDS CAA 72 bp ATCATCAAGAGGCAGAACGCTATCACTGGCCGCCTCTaGCCACGCAGCTTTCTCCGGAGCCAAGACGCCCGC +
Preference number: 6 (lower is better)
Translates to: IIKRQNAITGRL*PRSFLRSQDAR
Trigger: GCGGGCGTCTTGGCTCCGGAGAAAGCTGCGTGGCAAGAGGCGGCCAGTGATAGCGTTCTGCCTCTTGATGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434206.1
CDS CAA 90 bp GGGCTGTGTGCGGCTTATGGGTCCTCGTCCCTGAAGAGTGTGAGGTaGTGCTTTTGGATGTGTCCCAGCAGCACCTGTCCTCGCTGCTCC +
Preference number: 6 (lower is better)
Translates to: GLCAAYGSSSLKSVR*CFWMCPSSTCPRCS
Trigger: GGAGCAGCGAGGACAGGTGCTGCTGGGACACATCCAAAAGCACAACCTCACACTCTTCAGGGACGAGGACCCATAAGCCGCACACAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273146.6
ENST00000430121.3
CDS TCA 72 bp GCATTTCTCTCGGAGCCTCTCTTCCACACAGGGGTCTaGGGGCTCAGGCTCGAAGCCACAGCAGTAGCGATC +
Preference number: 6 (lower is better)
Translates to: AFLSEPLFHTGV*GLRLEATAVAI
Trigger: GATCGCTACTGCTGTGGCTTCGAGCCTGAGCCCTCAGACCCCTGTGTGGAAGAGAGGCTCCGAGAGAAATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000273146.6
ENST00000430121.3
ENST00000434206.1
ENST00000488863.5
ENST00000492161.1
CDS CCA 72 bp CTCTGTGTCTCCTGGATGGGACTGCCATGCTGGGGGTaGCCCAGGTCTTTGGTTCCTGGATCTCCAACCTCA +
Preference number: 6 (lower is better)
Translates to: LCVSWMGLPCWG*PRSLVPGSPTS
Trigger: TGAGGTTGGAGATCCAGGAACCAAAGACCTGGGCCACCCCCAGCATGGCAGTCCCATCCAGGAGACACAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273146.6
ENST00000430121.3
ENST00000434206.1
CDS CCA 72 bp GACACAGAAAGACCTGGGTCTGGGGTGACAAGGGGATaGTGTGGAGGAGACGTACCAGGATGTGGACCAGCC +
Preference number: 6 (lower is better)
Translates to: DTERPGSGVTRG*CGGDVPGCGPA
Trigger: GGCTGGTCCACATCCTGGTACGTCTCCTCCACACCATCCCCTTGTCACCCCAGACCCAGGTCTTTCTGTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434206.1
ENST00000492161.1
CDS CAA 90 bp CCCTCCTGGGGACTCCCTGCTTCTGTCCACTCTTGCTCTATGGCCTaGCTCCTCAGCACAGACCAAGATGGAGTTCCTGGGCAAAGCACG +
Preference number: 6 (lower is better)
Translates to: PSWGLPASVHSCSMA*LLSTDQDGVPGQST
Trigger: CGTGCTTTGCCCAGGAACTCCATCTTGGTCTGTGCTGAGGAGCAAGGCCATAGAGCAAGAGTGGACAGAAGCAGGGAGTCCCCAGGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273146.6
ENST00000430121.3
ENST00000434206.1
CDS CAA 90 bp TGTGTCTCCTGGATGGGACTGCCATGCTGGGGGTGGCCCAGGTCTTaGGTTCCTGGATCTCCAACCTCATCCTCCCTCAGGAGCACAACA +
Preference number: 6 (lower is better)
Translates to: CVSWMGLPCWGWPRS*VPGSPTSSSLRSTT
Trigger: TGTTGTGCTCCTGAGGGAGGATGAGGTTGGAGATCCAGGAACCAAAGACCTGGGCCACCCCCAGCATGGCAGTCCCATCCAGGAGACACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273146.6
ENST00000430121.3
ENST00000434206.1
CDS CAA 90 bp TGCGGCTTATGGGTCCTCGTCCCTGAAGAGTGTGAGGTTGTGCTTTaGGATGTGTCCCAGCAGCACCTGTCCTCGCTGCTCCAGGGTCTG +
Preference number: 6 (lower is better)
Translates to: CGLWVLVPEECEVVL*DVSQQHLSSLLQGL
Trigger: CAGACCCTGGAGCAGCGAGGACAGGTGCTGCTGGGACACATCCAAAAGCACAACCTCACACTCTTCAGGGACGAGGACCCATAAGCCGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273146.6
ENST00000430121.3
CDS GCA 72 bp TCATCAAGAGGCAGAACGCTATCACTGGCCGCCTCTTaGCACGCAGCTTTCTCCGGAGCCAAGACGCCATGT +
Preference number: 6 (lower is better)
Translates to: SSRGRTLSLAAS*HAAFSGAKTPC
Trigger: ACATGGCGTCTTGGCTCCGGAGAAAGCTGCGTGGCAAGAGGCGGCCAGTGATAGCGTTCTGCCTCTTGATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273146.6
ENST00000430121.3
CDS CCA 72 bp AAGGTTGCCAGCGTTATCGATGTAGACCAGGTGAGATaGATCGCTGCTCCGGACCAGGATGTGGACCAGCCG +
Preference number: 6 (lower is better)
Translates to: KVASVIDVDQVR*IAAPDQDVDQP
Trigger: CGGCTGGTCCACATCCTGGTCCGGAGCAGCGATCCATCTCACCTGGTCTACATCGATAACGCTGGCAACCTT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273146.6
ENST00000430121.3
ENST00000488863.5
CDS CAA 72 bp ATCATCAAGAGGCAGAACGCTATCACTGGCCGCCTCTaGCCACGCAGCTTTCTCCGGAGCCAAGACGCCATG +
Preference number: 6 (lower is better)
Translates to: IIKRQNAITGRL*PRSFLRSQDAM
Trigger: CATGGCGTCTTGGCTCCGGAGAAAGCTGCGTGGCAAGAGGCGGCCAGTGATAGCGTTCTGCCTCTTGATGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273146.6
ENST00000430121.3
CDS CAA 72 bp TGGGTCCTCGTCCCTGAAGAGTGTGAGGTTGTGCTTTaGGATGTGTCCCAGCAGCACCTGTCCTCGCTGCTC +
Preference number: 6 (lower is better)
Translates to: WVLVPEECEVVL*DVSQQHLSSLL
Trigger: GAGCAGCGAGGACAGGTGCTGCTGGGACACATCCAAAAGCACAACCTCACACTCTTCAGGGACGAGGACCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273146.6
ENST00000430121.3
CDS TCA 72 bp CGAGCTGCTCAACAGCGTCTCAGCATCACACCATACTaGCCCTTGCAGCTTCTCAACAGAGCCAGGCCACTG +
Preference number: 6 (lower is better)
Translates to: RAAQQRLSITPY*PLQLLNRARPL
Trigger: CAGTGGCCTGGCTCTGTTGAGAAGCTGCAAGGGTCAGTATGGTGTGATGCTGAGACGCTGTTGAGCAGCTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273146.6
ENST00000430121.3
ENST00000434206.1
CDS GCA 72 bp GCTCCGCCTTGGCTTTCCCAGAACACTGGGTCCATCTaGAGCGACTTCAGCAGCATGTTCTGTAGACACCCT +
Preference number: 6 (lower is better)
Translates to: APPWLSQNTGSI*SDFSSMFCRHP
Trigger: AGGGTGTCTACAGAACATGCTGCTGAAGTCGCTGCAGATGGACCCAGTGTTCTGGGAAAGCCAAGGCGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273146.6
ENST00000430121.3
ENST00000488863.5
CDS GCA 72 bp GCTTATGGGTCCTCGTCCCTGAAGAGTGTGAGGTTGTaGTTTTGGATGTGTCCCAGCAGCACCTGTCCTCGC +
Preference number: 6 (lower is better)
Translates to: AYGSSSLKSVRL*FWMCPSSTCPR
Trigger: GCGAGGACAGGTGCTGCTGGGACACATCCAAAAGCACAACCTCACACTCTTCAGGGACGAGGACCCATAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273146.6
ENST00000430121.3
CDS CCA 72 bp GGCCTTGCTCCTCAGCACAGACCAAGATGGAGTTCCTaGGCAAAGCACGGCTTCTCCAGAAGCCCATGTTTC +
Preference number: 6 (lower is better)
Translates to: GLAPQHRPRWSS*AKHGFSRSPCF
Trigger: GAAACATGGGCTTCTGGAGAAGCCGTGCTTTGCCCAGGAACTCCATCTTGGTCTGTGCTGAGGAGCAAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273146.6
ENST00000430121.3
ENST00000434206.1
CDS CCA 72 bp TTCTCAGCTCCCAGCAGATCCCTGCCTTCTGCTGTATaGGGCCAGAGTGTCAGCCCAGAAGTAGCTCTCCAA +
Preference number: 6 (lower is better)
Translates to: FSAPSRSLPSAV*GQSVSPEVALQ
Trigger: TTGGAGAGCTACTTCTGGGCTGACACTCTGGCCCCATACAGCAGAAGGCAGGGATCTGCTGGGAGCTGAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273146.6
ENST00000430121.3
ENST00000434206.1
CDS CAA 72 bp GCGGCTTATGGGTCCTCGTCCCTGAAGAGTGTGAGGTaGTGCTTTTGGATGTGTCCCAGCAGCACCTGTCCT +
Preference number: 6 (lower is better)
Translates to: AAYGSSSLKSVR*CFWMCPSSTCP
Trigger: AGGACAGGTGCTGCTGGGACACATCCAAAAGCACAACCTCACACTCTTCAGGGACGAGGACCCATAAGCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273146.6
ENST00000430121.3
CDS CAA 90 bp TGCAGAAGAAGTGGCTATTCTGCCCTCTCCAATGGCCTCGGCACATaGCTTCCCACCCTGGACTCTAGTTTTGACAGGAGCAGCACCAGC +
Preference number: 6 (lower is better)
Translates to: CRRSGYSALSNGLGT*LPTLDSSFDRSSTS
Trigger: GCTGGTGCTGCTCCTGTCAAAACTAGAGTCCAGGGTGGGAAGCAATGTGCCGAGGCCATTGGAGAGGGCAGAATAGCCACTTCTTCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492161.1
CDS GCA 72 bp AGAAGCCCTTCCCCGGGGGAAGCACCTTGCTTCTTATaGAGAAGAAGTGGCTATTCTGCCCTCTCCAATGGC +
Preference number: 6 (lower is better)
Translates to: RSPSPGEAPCFL*RRSGYSALSNG
Trigger: GCCATTGGAGAGGGCAGAATAGCCACTTCTTCTGCATAAGAAGCAAGGTGCTTCCCCCGGGGAAGGGCTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492161.1
CDS TCA 72 bp CTGGACTCTAGTTTTGACAGGAGCAGCACCAGCCTGTaGGCCACTGCAGTCTTGGGTTCATGCCCTAATGCT +
Preference number: 6 (lower is better)
Translates to: LDSSFDRSSTSL*ATAVLGSCPNA
Trigger: AGCATTAGGGCATGAACCCAAGACTGCAGTGGCTCACAGGCTGGTGCTGCTCCTGTCAAAACTAGAGTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434206.1
ENST00000492161.1
CDS CAA 90 bp TCACTGCAGGAGAAGATAGAGAAGCCCTTCCCCGGGGGAAGCACCTaGCTTCTTATGCAGAAGAAGTGGCTATTCTGCCCTCTCCAATGG +
Preference number: 6 (lower is better)
Translates to: SLQEKIEKPFPGGST*LLMQKKWLFCPLQW
Trigger: CCATTGGAGAGGGCAGAATAGCCACTTCTTCTGCATAAGAAGCAAGGTGCTTCCCCCGGGGAAGGGCTTCTCTATCTTCTCCTGCAGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492161.1
CDS GCA 72 bp GCCGAAAGTTCAGCTTGTCCTCAGGGTGCTGAAGGTTaGCAGCGTTATCGATGTAGACCAGGTGAGATGGAT +
Preference number: 6 (lower is better)
Translates to: AESSACPQGAEG*QRYRCRPGEMD
Trigger: ATCCATCTCACCTGGTCTACATCGATAACGCTGGCAACCTTCAGCACCCTGAGGACAAGCTGAACTTTCGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273146.6
ENST00000430121.3
ENST00000488863.5
CDS CAA 72 bp GAGAAGATAGAGAAGCCCTTCCCCGGGGGAAGCACCTaGCTTCTTATGCAGAAGAAGTGGCTATTCTGCCCT +
Preference number: 6 (lower is better)
Translates to: EKIEKPFPGGST*LLMQKKWLFCP
Trigger: AGGGCAGAATAGCCACTTCTTCTGCATAAGAAGCAAGGTGCTTCCCCCGGGGAAGGGCTTCTCTATCTTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492161.1
CDS TCA 72 bp GAGCACAACATGCTGAGTACTGAGTCTTGGATGTCCTaGCAAAGTAATGTCCCTCCTCACCCTCCCTGGATG +
Preference number: 6 (lower is better)
Translates to: EHNMLSTESWMS*QSNVPPHPPWM
Trigger: CATCCAGGGAGGGTGAGGAGGGACATTACTTTGTCAGGACATCCAAGACTCAGTACTCAGCATGTTGTGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273146.6
ENST00000430121.3
ENST00000434206.1
CDS CCA 72 bp AAGATGAGTGAGCCCAAGAAAATGTGGCCATCAGGATaGATGCTCATTGACTCAGGGCTGTGTGCGGCTTAT +
Preference number: 6 (lower is better)
Translates to: KMSEPKKMWPSG*MLIDSGLCAAY
Trigger: ATAAGCCGCACACAGCCCTGAGTCAATGAGCATCCATCCTGATGGCCACATTTTCTTGGGCTCACTCATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273146.6
ENST00000430121.3
CDS CCA 72 bp TCTCAAACTCTACTTCCAGGAGCCCTAGTTGTTCCCTaGAGTCTCTTAGGGGCAGTGGAGACAGTGAAAACA +
Preference number: 6 (lower is better)
Translates to: SQTLLPGALVVP*SLLGAVETVKT
Trigger: TGTTTTCACTGTCTCCACTGCCCCTAAGAGACTCCAGGGAACAACTAGGGCTCCTGGAAGTAGAGTTTGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434206.1
ENST00000492161.1
CDS TCA 72 bp TCTCCAACCTCATCCTCCCTCAGGAGCACAACATGCTaGGTACTGAGTCTTGGATGTCCTGACAAAGTAATG +
Preference number: 6 (lower is better)
Translates to: SPTSSSLRSTTC*VLSLGCPDKVM
Trigger: CATTACTTTGTCAGGACATCCAAGACTCAGTACTCAGCATGTTGTGCTCCTGAGGGAGGATGAGGTTGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273146.6
ENST00000430121.3
ENST00000434206.1
CDS TCA 72 bp GAACAAGACTGGGAAACCCCAGCATCAACTGATCTCTaGAACTTGTTAACAGCATCTTCTGAAGGACACAGA +
Preference number: 6 (lower is better)
Translates to: EQDWETPASTDL*NLLTASSEGHR
Trigger: TCTGTGTCCTTCAGAAGATGCTGTTAACAAGTTTCAGAGATCAGTTGATGCTGGGGTTTCCCAGTCTTGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434206.1
ENST00000492161.1
CDS TCA 72 bp ACTGCAATTCCTCATTTACTGGCACAACGAGGATGTTaGCTAGACACACCATTCTCAAACTCTACTTCCAGG +
Preference number: 6 (lower is better)
Translates to: TAIPHLLAQRGC*LDTPFSNSTSR
Trigger: CCTGGAAGTAGAGTTTGAGAATGGTGTGTCTAGTCAACATCCTCGTTGTGCCAGTAAATGAGGAATTGCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434206.1
ENST00000492161.1
CDS GCA 72 bp ACATTCTTAAAGCTCCATTTTGTCAGCTTTATATATTaGGGACTCCTGGAAATATTCAAACAACTGGTTCTG +
Preference number: 6 (lower is better)
Translates to: TFLKLHFVSFIY*GLLEIFKQLVL
Trigger: CAGAACCAGTTGTTTGAATATTTCCAGGAGTCCGCAATATATAAAGCTGACAAAATGGAGCTTTAAGAATGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434206.1
ENST00000492161.1
CDS CAA 72 bp CACATTCTTAAAGCTCCATTTTGTCAGCTTTATATATaGCGGACTCCTGGAAATATTCAAACAACTGGTTCT +
Preference number: 6 (lower is better)
Translates to: HILKAPFCQLYI*RTPGNIQTTGS
Trigger: AGAACCAGTTGTTTGAATATTTCCAGGAGTCCGCAATATATAAAGCTGACAAAATGGAGCTTTAAGAATGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434206.1
ENST00000492161.1