RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GAS7 (Homo sapiens)

Ensembl gene IDs: ENSG00000007237

Ensembl transcript IDs: ENST00000323816.8, ENST00000396115.6, ENST00000432992.7, ENST00000437099.6, ENST00000542249.5, ENST00000578456.1, ENST00000578599.5, ENST00000578655.1, ENST00000579140.5, ENST00000579158.5, ENST00000580043.1, ENST00000580811.5, ENST00000580865.5, ENST00000581112.5, ENST00000581871.5, ENST00000583882.5, ENST00000584146.6, ENST00000584389.5, ENST00000585266.5

Found 1645 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCAGCCCAAAGGTGCACAGGGCACCGTGGCGGACAGGCCCCAGCTTaGTGGCCTCTGAGACGAGCTGGTTTGTTTCCATCCCTGAAGCCT +
Preference number: 1 (lower is better)
Translates to: AAQRCTGHRGGQAPA*WPLRRAGLFPSLKP
Trigger: AGGCTTCAGGGATGGAAACAAACCAGCTCGTCTCAGAGGCCAGCAAGCTGGGGCCTGTCCGCCACGGTGCCCTGTGCACCTTTGGGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
3UTR CCA 90 bp GCTGGCGTCCCTTTGAATGTCTGTCCCTGGGTCCACACAGCTGCCTaGAACCCACGACTCCCGAGAGCCCGTCTGCTGCAGGTGATGCTG +
Preference number: 1 (lower is better)
Translates to: AGVPLNVCPWVHTAA*NPRLPRARLLQVML
Trigger: CAGCATCACCTGCAGCAGACGGGCTCTCGGGAGTCGTGGGTTCCAGGCAGCTGTGTGGACCCAGGGACAGACATTCAAAGGGACGCCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR CCA 90 bp GCCCAAAGGTGCACAGGGCACCGTGGCGGACAGGCCCCAGCTTGCTaGCCTCTGAGACGAGCTGGTTTGTTTCCATCCCTGAAGCCTTTG +
Preference number: 1 (lower is better)
Translates to: AQRCTGHRGGQAPAC*PLRRAGLFPSLKPL
Trigger: CAAAGGCTTCAGGGATGGAAACAAACCAGCTCGTCTCAGAGGCCAGCAAGCTGGGGCCTGTCCGCCACGGTGCCCTGTGCACCTTTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
3UTR TCA 90 bp CCATGTACCACCATCCAGTGGGGTGCAGGTACAGGCCAGGCTGTGTaGTCACCAGCTAGGCAAGGCTCCAGCTGCGACAAGGACTCCATC +
Preference number: 1 (lower is better)
Translates to: PCTTIQWGAGTGQAV*SPARQGSSCDKDSI
Trigger: GATGGAGTCCTTGTCGCAGCTGGAGCCTTGCCTAGCTGGTGATCACACAGCCTGGCCTGTACCTGCACCCCACTGGATGGTGGTACATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR CCA 90 bp CCCACCACGCGCCAAAAGGCGAGTGTGAGCCCTAAGAACAGCTTGTaGGCACAGCTGGCATTTGGAGGAGGAGCCTGGGGAACTGAAGGA +
Preference number: 1 (lower is better)
Translates to: PTTRQKASVSPKNSL*AQLAFGGGAWGTEG
Trigger: TCCTTCAGTTCCCCAGGCTCCTCCTCCAAATGCCAGCTGTGCCCACAAGCTGTTCTTAGGGCTCACACTCGCCTTTTGGCGCGTGGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR CCA 90 bp TTACCTCAGGGGTCACACTCAGCCTGGTCTGGCCTTAACTGGGTGTaGTCCTGTCCCTGCCACCATGTACCACCATCCAGTGGGGTGCAG +
Preference number: 1 (lower is better)
Translates to: LPQGSHSAWSGLNWV*SCPCHHVPPSSGVQ
Trigger: CTGCACCCCACTGGATGGTGGTACATGGTGGCAGGGACAGGACCACACCCAGTTAAGGCCAGACCAGGCTGAGTGTGACCCCTGAGGTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR TCA 90 bp AGCACTGCCTCCCACCGCAGAAATTCTCCTTGGCCAACAGGGTGCTaGGTGGAGGTAGAAAGGAGGCCCAGGGTGGTCCCACTGACAGAA +
Preference number: 1 (lower is better)
Translates to: STASHRRNSPWPTGC*VEVERRPRVVPLTE
Trigger: TTCTGTCAGTGGGACCACCCTGGGCCTCCTTTCTACCTCCACTCAGCACCCTGTTGGCCAAGGAGAATTTCTGCGGTGGGAGGCAGTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR TCA 90 bp TCTGCTGCAGGTGATGCTGGAAGGGAAGCGCCCCCACTTGACAGATaGGTGCACGGAGGTCCCGACAGGGGATGTGACTTAACTTCAGGT +
Preference number: 1 (lower is better)
Translates to: SAAGDAGREAPPLDR*VHGGPDRGCDLTSG
Trigger: ACCTGAAGTTAAGTCACATCCCCTGTCGGGACCTCCGTGCACTCATCTGTCAAGTGGGGGCGCTTCCCTTCCAGCATCACCTGCAGCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR GCA 90 bp TCCCAGAAGGGAGCAGATCTGCTGGCTGAGATGCAAGCTTCAGGTTaGAGCAGACGTGAGCAGCAATTGAGCACCCATCCGTCCCTTCCC +
Preference number: 1 (lower is better)
Translates to: SQKGADLLAEMQASG*SRREQQLSTHPSLP
Trigger: GGGAAGGGACGGATGGGTGCTCAATTGCTGCTCACGTCTGCTGCAACCTGAAGCTTGCATCTCAGCCAGCAGATCTGCTCCCTTCTGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR CCA 90 bp CCTCCAAAAATGGACTGGCCCAAACTGGGCCAACCTGAGCTACCCTaGAAGACGCAAGAGGGCTCACTCTATCCCAGGGATGAACAGAGG +
Preference number: 1 (lower is better)
Translates to: PPKMDWPKLGQPELP*KTQEGSLYPRDEQR
Trigger: CCTCTGTTCATCCCTGGGATAGAGTGAGCCCTCTTGCGTCTTCCAGGGTAGCTCAGGTTGGCCCAGTTTGGGCCAGTCCATTTTTGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR TCA 90 bp GAAAGAGTGACCTCCAAAAATGGACTGGCCCAAACTGGGCCAACCTaGGCTACCCTGGAAGACGCAAGAGGGCTCACTCTATCCCAGGGA +
Preference number: 1 (lower is better)
Translates to: ERVTSKNGLAQTGPT*ATLEDARGLTLSQG
Trigger: TCCCTGGGATAGAGTGAGCCCTCTTGCGTCTTCCAGGGTAGCTCAGGTTGGCCCAGTTTGGGCCAGTCCATTTTTGGAGGTCACTCTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR GCA 90 bp GAGGAGCCTGGGGAACTGAAGGAAGCAGCAAGCTGGAAGTGGTCGTaGAAACAAGTTGAAGACCCTGGGCCAAGAACTTCCAGGGCGAAA +
Preference number: 1 (lower is better)
Translates to: EEPGELKEAASWKWS*KQVEDPGPRTSRAK
Trigger: TTTCGCCCTGGAAGTTCTTGGCCCAGGGTCTTCAACTTGTTTGCACGACCACTTCCAGCTTGCTGCTTCCTTCAGTTCCCCAGGCTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR GCA 90 bp AAGCATCATGATGAGCCCCAGGGCCAGCCCCAGCCTTCTTGTCCATaGTGCTTCTGCTCGCCTTTCAAAGCCTCCAACGCCCAATACATA +
Preference number: 1 (lower is better)
Translates to: KHHDEPQGQPQPSCP*CFCSPFKASNAQYI
Trigger: TATGTATTGGGCGTTGGAGGCTTTGAAAGGCGAGCAGAAGCAGCATGGACAAGAAGGCTGGGGCTGGCCCTGGGGCTCATCATGATGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR CCA 90 bp AGTCCCAGCCCTGCCATACACAAGAAGACAGAGCCATCTGGGGGATaGCAAAGACTTGCCCTAACCCATCTCACATGTAGGACTGACCCG +
Preference number: 1 (lower is better)
Translates to: SPSPAIHKKTEPSGG*QRLALTHLTCRTDP
Trigger: CGGGTCAGTCCTACATGTGAGATGGGTTAGGGCAAGTCTTTGCCATCCCCCAGATGGCTCTGTCTTCTTGTGTATGGCAGGGCTGGGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
3UTR CCA 90 bp GGCAAGGCTCCAGCTGCGACAAGGACTCCATCTTCACGCCTGTCCTaGCTCCTGGGGAGTAGACTCCAGAACATACTATCAAAGATCGAC +
Preference number: 1 (lower is better)
Translates to: GKAPAATRTPSSRLS*LLGSRLQNILSKID
Trigger: GTCGATCTTTGATAGTATGTTCTGGAGTCTACTCCCCAGGAGCCAGGACAGGCGTGAAGATGGAGTCCTTGTCGCAGCTGGAGCCTTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR CCA 90 bp AGACACAGCTTAGTGGAGTGTTTACCTCAGGGGTCACACTCAGCCTaGTCTGGCCTTAACTGGGTGTGGTCCTGTCCCTGCCACCATGTA +
Preference number: 1 (lower is better)
Translates to: RHSLVECLPQGSHSA*SGLNWVWSCPCHHV
Trigger: TACATGGTGGCAGGGACAGGACCACACCCAGTTAAGGCCAGACCAGGCTGAGTGTGACCCCTGAGGTAAACACTCCACTAAGCTGTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR TCA 90 bp TCAGGGCCGCCATCCCCACGGTCCAAGGGGCCTATGTGTTGCCACTaGCTGAAAGCACTAGAAAGAATAGAGGGTAACAAGTGGCTCTTC +
Preference number: 1 (lower is better)
Translates to: SGPPSPRSKGPMCCH*LKALERIEGNKWLF
Trigger: GAAGAGCCACTTGTTACCCTCTATTCTTTCTAGTGCTTTCAGTCAGTGGCAACACATAGGCCCCTTGGACCGTGGGGATGGCGGCCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR TCA 90 bp TCTTTCTGCACTACCAAAAACCCACCACGCGCCAAAAGGCGAGTGTaGGCCCTAAGAACAGCTTGTGGGCACAGCTGGCATTTGGAGGAG +
Preference number: 1 (lower is better)
Translates to: SFCTTKNPPRAKRRV*ALRTACGHSWHLEE
Trigger: CTCCTCCAAATGCCAGCTGTGCCCACAAGCTGTTCTTAGGGCTCACACTCGCCTTTTGGCGCGTGGTGGGTTTTTGGTAGTGCAGAAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR TCA 90 bp GTACCCAACTGGTCTCGGGACTCACCTTTCACTGAGCAGGGGGCATaGACAAGACACAGCTTAGTGGAGTGTTTACCTCAGGGGTCACAC +
Preference number: 1 (lower is better)
Translates to: VPNWSRDSPFTEQGA*TRHSLVECLPQGSH
Trigger: GTGTGACCCCTGAGGTAAACACTCCACTAAGCTGTGTCTTGTTCATGCCCCCTGCTCAGTGAAAGGTGAGTCCCGAGACCAGTTGGGTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR GCA 90 bp CCCACCAGTGACAGAAAACTGTACAAGGGACAGCAGTCCCAGCCCTaGCATACACAAGAAGACAGAGCCATCTGGGGGATGGCAAAGACT +
Preference number: 1 (lower is better)
Translates to: PTSDRKLYKGQQSQP*HTQEDRAIWGMAKT
Trigger: AGTCTTTGCCATCCCCCAGATGGCTCTGTCTTCTTGTGTATGGCAGGGCTGGGACTGCTGTCCCTTGTACAGTTTTCTGTCACTGGTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
3UTR CCA 90 bp GCTGGGGGAAGGATGGATTGGCATTTCCAGAGGAGACTTTACAGATaGCGCCTGATCTCATGGGACACGATTCAGCGCTCAATTTGGGGC +
Preference number: 1 (lower is better)
Translates to: AGGRMDWHFQRRLYR*RLISWDTIQRSIWG
Trigger: GCCCCAAATTGAGCGCTGAATCGTGTCCCATGAGATCAGGCGCCATCTGTAAAGTCTCCTCTGGAAATGCCAATCCATCCTTCCCCCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
3UTR TCA 90 bp GGAACTGAAGGAAGCAGCAAGCTGGAAGTGGTCGTGCAAACAAGTTaGAGACCCTGGGCCAAGAACTTCCAGGGCGAAAGGCTCAGTGTA +
Preference number: 1 (lower is better)
Translates to: GTEGSSKLEVVVQTS*RPWAKNFQGERLSV
Trigger: TACACTGAGCCTTTCGCCCTGGAAGTTCTTGGCCCAGGGTCTTCAACTTGTTTGCACGACCACTTCCAGCTTGCTGCTTCCTTCAGTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR GCA 90 bp ATGAAGAAAGATGGATTTCCAGGGCATGGGCTCCCGACTAGAATCTaGCCCTCGCTCATGCTTCTCCCGGCCCCTTTAGACTCTTTAGAC +
Preference number: 1 (lower is better)
Translates to: MKKDGFPGHGLPTRI*PSLMLLPAPLDSLD
Trigger: GTCTAAAGAGTCTAAAGGGGCCGGGAGAAGCATGAGCGAGGGGCAGATTCTAGTCGGGAGCCCATGCCCTGGAAATCCATCTTTCTTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
3UTR CCA 90 bp CTCCAGCTGCGACAAGGACTCCATCTTCACGCCTGTCCTGGCTCCTaGGGAGTAGACTCCAGAACATACTATCAAAGATCGACGAATGAG +
Preference number: 1 (lower is better)
Translates to: LQLRQGLHLHACPGS*GVDSRTYYQRSTNE
Trigger: CTCATTCGTCGATCTTTGATAGTATGTTCTGGAGTCTACTCCCCAGGAGCCAGGACAGGCGTGAAGATGGAGTCCTTGTCGCAGCTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR TCA 90 bp ATTCGTTGGTACACTGTTTCGGTGTGCCCAGCTGTTTATCAATCCTaGCTAGCAGAGCACTGCCTCCCACCGCAGAAATTCTCCTTGGCC +
Preference number: 1 (lower is better)
Translates to: IRWYTVSVCPAVYQS*LAEHCLPPQKFSLA
Trigger: GGCCAAGGAGAATTTCTGCGGTGGGAGGCAGTGCTCTGCTAGTCAGGATTGATAAACAGCTGGGCACACCGAAACAGTGTACCAACGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR TCA 90 bp AGCCAGACACAGCATGAACACGTGTACAGGGTACATCATTGGAAATaGGAAAGGGAGGAGGTACATGCAGTTGCCGGTGGCCTGAGACAC +
Preference number: 1 (lower is better)
Translates to: SQTQHEHVYRVHHWK*EREEVHAVAGGLRH
Trigger: GTGTCTCAGGCCACCGGCAACTGCATGTACCTCCTCCCTTTCTCATTTCCAATGATGTACCCTGTACACGTGTTCATGCTGTGTCTGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR TCA 90 bp AATAAAGAAGGAGGGCTGCAAAGGATTCTGGGTGCGGCTGTGAGCTaGATGGCACCTTCTACCCATGATTCTGATCCTGACACCTGGCTT +
Preference number: 1 (lower is better)
Translates to: NKEGGLQRILGAAVS*MAPSTHDSDPDTWL
Trigger: AAGCCAGGTGTCAGGATCAGAATCATGGGTAGAAGGTGCCATTCAGCTCACAGCCGCACCCAGAATCCTTTGCAGCCCTCCTTCTTTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
3UTR CCA 90 bp TTATTTACTGATCTAGGCAGCCAGAGGGTGGAAGGATATACAATGTaGAGGAAACACATTCATACCGGGGTGAGGAGTGCTGGCGGGAGA +
Preference number: 1 (lower is better)
Translates to: LFTDLGSQRVEGYTM*RKHIHTGVRSAGGR
Trigger: TCTCCCGCCAGCACTCCTCACCCCGGTATGAATGTGTTTCCTCCACATTGTATATCCTTCCACCCTCTGGCTGCCTAGATCAGTAAATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR TCA 90 bp GAAGGATGGATTGGCATTTCCAGAGGAGACTTTACAGATGGCGCCTaGTCTCATGGGACACGATTCAGCGCTCAATTTGGGGCTAATTTG +
Preference number: 1 (lower is better)
Translates to: EGWIGISRGDFTDGA*SHGTRFSAQFGANL
Trigger: CAAATTAGCCCCAAATTGAGCGCTGAATCGTGTCCCATGAGATCAGGCGCCATCTGTAAAGTCTCCTCTGGAAATGCCAATCCATCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
3UTR TCA 90 bp TCGGTTTCTAGCACGTTGACTGAAAGACCAGTGAGTTGTGCTTGTTaGATTCTGCCCTCACTGCAGATGTGCAGGTCAAACCCAAAGTGG +
Preference number: 1 (lower is better)
Translates to: SVSSTLTERPVSCAC*ILPSLQMCRSNPKW
Trigger: CCACTTTGGGTTTGACCTGCACATCTGCAGTGAGGGCAGAATTCAACAAGCACAACTCACTGGTCTTTCAGTCAACGTGCTAGAAACCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
3UTR GCA 90 bp GAGGAATGCCCATCTTACATACAACTAGAGCGCCGCTTCTCAGCATaGCTGGCTTGTCTTGAGCATTCGCTGAATGAATGCAGATTAATC +
Preference number: 1 (lower is better)
Translates to: EECPSYIQLERRFSA*LACLEHSLNECRLI
Trigger: GATTAATCTGCATTCATTCAGCGAATGCTCAAGACAAGCCAGGCATGCTGAGAAGCGGCGCTCTAGTTGTATGTAAGATGGGCATTCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR GCA 90 bp TTTGCCCTCTGTCTGATTCTCGCTCTAACCTGCTGCAATGGGAATTaGTTCTTCACCTCCAGGAAAGCCTCAACAAAAATACTCCTGAGG +
Preference number: 1 (lower is better)
Translates to: FALCLILALTCCNGN*FFTSRKASTKILLR
Trigger: CCTCAGGAGTATTTTTGTTGAGGCTTTCCTGGAGGTGAAGAAGCAATTCCCATTGCAGCAGGTTAGAGCGAGAATCAGACAGAGGGCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR TCA 90 bp CTTCCCGGCAAGGAGAAGGAACAAACCACACGCACACATCATGAATaGCTCAAAAGCATTAAGCTGAGGGAAAGATGCCAGACTCAAAAG +
Preference number: 1 (lower is better)
Translates to: LPGKEKEQTTRTHHE*LKSIKLRERCQTQK
Trigger: CTTTTGAGTCTGGCATCTTTCCCTCAGCTTAATGCTTTTGAGTCATTCATGATGTGTGCGTGTGGTTTGTTCCTTCTCCTTGCCGGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR TCA 90 bp GAAATGGAAGGGACATTCTCAAGAATAGCCCAGACCCGCCCACTTTaGATAAACCCAGCTAAGTCCTCACCTAAGCACCAAGACATAAAA +
Preference number: 1 (lower is better)
Translates to: EMEGTFSRIAQTRPL*INPAKSSPKHQDIK
Trigger: TTTTATGTCTTGGTGCTTAGGTGAGGACTTAGCTGGGTTTATTCAAAGTGGGCGGGTCTGGGCTATTCTTGAGAATGTCCCTTCCATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR TCA 90 bp AGGCTCAGTGTAAAAATAAAGAAGCAGAGTAGTACGCCCATGCAATaGAATACTTCCCGGCAAGGAGAAGGAACAAACCACACGCACACA +
Preference number: 1 (lower is better)
Translates to: RLSVKIKKQSSTPMQ*NTSRQGEGTNHTHT
Trigger: TGTGTGCGTGTGGTTTGTTCCTTCTCCTTGCCGGGAAGTATTTCATTGCATGGGCGTACTACTCTGCTTCTTTATTTTTACACTGAGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR TCA 90 bp TTAACATTAGAAGTGCTCTCTCCGACCTACACAAGGAATGCATCTTaGGCCTTCTGTTTAAACACTCCTTGTCAAGACTACCTGCAGCTG +
Preference number: 1 (lower is better)
Translates to: LTLEVLSPTYTRNAS*AFCLNTPCQDYLQL
Trigger: CAGCTGCAGGTAGTCTTGACAAGGAGTGTTTAAACAGAAGGCTCAAGATGCATTCCTTGTGTAGGTCGGAGAGAGCACTTCTAATGTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR CCA 90 bp AAATCACCTAAACAAGCCAAGGTCGCTGATGTCCTTCGAATGTTATaGCTTGTATTTCCAAAAGGGACTTTGGCTCAGCCCAGATTTTTC +
Preference number: 1 (lower is better)
Translates to: KSPKQAKVADVLRML*LVFPKGTLAQPRFF
Trigger: GAAAAATCTGGGCTGAGCCAAAGTCCCTTTTGGAAATACAAGCCATAACATTCGAAGGACATCAGCGACCTTGGCTTGTTTAGGTGATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR-3UTR CCA 90 bp GGGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGGGCATCCACTCGGCATaGGCCCCATGGTGGGAGCCC +
Preference number: 2 (lower is better)
Translates to: GPGNMGEPPARLSGSPFWGIHSA*APWWEP
Trigger: GGGCTCCCACCATGGGGCCCATGCCGAGTGGATGCC...CCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000396115.6
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
3UTR-3UTR CCA 90 bp GGGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGGCCCAGGAGAGAGGGTaGGGGGCATCCACTCGGCAT +
Preference number: 2 (lower is better)
Translates to: GPGNMGEPPARLSGSPFWAQERG*GASTRH
Trigger: ATGCCGAGTGGATGCCCCCCACCCTCTCTCCTGGGC...CCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000396115.6
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
3UTR-3UTR CCA 90 bp GTGGGTCTGTCTTCTGGGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCGCCCAGGAGAGAGGGTaGGGGGCATCCACTCGGCAT +
Preference number: 2 (lower is better)
Translates to: VGLSSGPGNMGEPPARLSAQERG*GASTRH
Trigger: ATGCCGAGTGGATGCCCCCCACCCTCTCTCCTGGGC...GGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCCCAGAAGACAGACCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000396115.6
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
3UTR CAA 90 bp GGCAGCCCAAAGGTGCACAGGGCACCGTGGCGGACAGGCCCCAGCTaGCTGGCCTCTGAGACGAGCTGGTTTGTTTCCATCCCTGAAGCC +
Preference number: 2 (lower is better)
Translates to: GSPKVHRAPWRTGPS*LASETSWFVSIPEA
Trigger: GGCTTCAGGGATGGAAACAAACCAGCTCGTCTCAGAGGCCAGCAAGCTGGGGCCTGTCCGCCACGGTGCCCTGTGCACCTTTGGGCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
3UTR-3UTR GCA 90 bp CATCTCACATGTAGGACTGACCCGGCCCCATTAAGAGCCTGTGGTGGGCGGCCCAGGGCAGCCCAAAGGTaGACAGGGCACCGTGGCGGA +
Preference number: 2 (lower is better)
Translates to: HLTCRTDPAPLRACGGRPRAAQR*TGHRGG
Trigger: TCCGCCACGGTGCCCTGTGCACCTTTGGGCTGCCCT...GGGCCGCCCACCACAGGCTCTTAATGGGGCCGGGTCAGTCCTACATGTGAGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
3UTR-3UTR CCA 90 bp AATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAATCACCAGGGCATCCACTCGGCATaGGCCCCATGGTGGGAGCCC +
Preference number: 2 (lower is better)
Translates to: NMGEPPARLSGSPFWNHQGIHSA*APWWEP
Trigger: GGGCTCCCACCATGGGGCCCATGCCGAGTGGATGCC...CTGGTGATTCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000323816.8
ENST00000396115.6
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000579158.5
ENST00000580865.5
ENST00000585266.5
3UTR-3UTR CCA 90 bp GGATTTCCAGGGCATGGGCTCCCGACTAGAATCTGCCCCTCGCTCATGCTTCTCGGCATCCACTCGGCATaGGCCCCATGGTGGGAGCCC +
Preference number: 2 (lower is better)
Translates to: GFPGHGLPTRICPSLMLLGIHSA*APWWEP
Trigger: GGGCTCCCACCATGGGGCCCATGCCGAGTGGATGCC...GAGAAGCATGAGCGAGGGGCAGATTCTAGTCGGGAGCCCATGCCCTGGAAATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
3UTR-3UTR CCA 90 bp AATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAATCACCAGGCCCAGGAGAGAGGGTaGGGGGCATCCACTCGGCAT +
Preference number: 2 (lower is better)
Translates to: NMGEPPARLSGSPFWNHQAQERG*GASTRH
Trigger: ATGCCGAGTGGATGCCCCCCACCCTCTCTCCTGGGC...CTGGTGATTCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000323816.8
ENST00000396115.6
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000579158.5
ENST00000580865.5
ENST00000585266.5
3UTR-3UTR CCA 90 bp TGTCCAGAAGGAGCGGGAAGCAAAGGTGGCGGGACACTGCCTGAAAGGCGACAAGCCCAGGAGAGAGGGTaGGGGGCATCCACTCGGCAT +
Preference number: 2 (lower is better)
Translates to: CPEGAGSKGGGTLPERRQAQERG*GASTRH
Trigger: ATGCCGAGTGGATGCCCCCCACCCTCTCTCCTGGGC...TTGTCGCCTTTCAGGCAGTGTCCCGCCACCTTTGCTTCCCGCTCCTTCTGGACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
3UTR-3UTR CCA 90 bp CGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAAGCACAGCGGCATCCACTCGGCATaGGCCCCATGGTGGGAGCCC +
Preference number: 2 (lower is better)
Translates to: RQGPQSSSLCLFQSGKHSGIHSA*APWWEP
Trigger: GGGCTCCCACCATGGGGCCCATGCCGAGTGGATGCC...GCTGTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
3UTR-3UTR CCA 90 bp ACAGTCCTGAACACCACACGCAATCTCCAAAGGCCATCGCCCCAACCTCACCCCCAGGCCCCAGCTTGCTaGCCTCTGAGACGAGCTGGT +
Preference number: 2 (lower is better)
Translates to: TVLNTTRNLQRPSPQPHPQAPAC*PLRRAG
Trigger: ACCAGCTCGTCTCAGAGGCCAGCAAGCTGGGGCCTG...GGGGTGAGGTTGGGGCGATGGCCTTTGGAGATTGCGTGTGGTGTTCAGGACTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR-3UTR CCA 90 bp ACAGTCCTGAACACCACACGCAATCTCCAAAGGCCATCGCCCCAACCTCACCCCATTAAGAGCCTGTGGTaGGCGGCCCGGGAGAGTGGG +
Preference number: 2 (lower is better)
Translates to: TVLNTTRNLQRPSPQPHPIKSLW*AARESG
Trigger: CCCACTCTCCCGGGCCGCCCACCACAGGCTCTTAAT...GGGGTGAGGTTGGGGCGATGGCCTTTGGAGATTGCGTGTGGTGTTCAGGACTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR-3UTR CCA 90 bp GTGGAGGAAACACATTCATACCGGGGTGAGGAGTGCTGGCGGGAGACACGGCTCAACCCAGCAGAGTCCTaGCAGCCTCTTCGGCTCCCT +
Preference number: 2 (lower is better)
Translates to: VEETHSYRGEECWRETRLNPAES*QPLRLP
Trigger: AGGGAGCCGAAGAGGCTGCCAGGACTCTGCTGGGTT...GAGCCGTGTCTCCCGCCAGCACTCCTCACCCCGGTATGAATGTGTTTCCTCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR-3UTR CCA 90 bp GTGGAGGAAACACATTCATACCGGGGTGAGGAGTGCTGGCGGGAGACACGGCTCGTCCACACAGCTGCCTaGAACCCACGACTCCCGAGA +
Preference number: 2 (lower is better)
Translates to: VEETHSYRGEECWRETRLVHTAA*NPRLPR
Trigger: TCTCGGGAGTCGTGGGTTCCAGGCAGCTGTGTGGAC...GAGCCGTGTCTCCCGCCAGCACTCCTCACCCCGGTATGAATGTGTTTCCTCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR CAA 90 bp CGTGGCGGACAGGCCCCAGCTTGCTGGCCTCTGAGACGAGCTGGTTaGTTTCCATCCCTGAAGCCTTTGGACGAGCTGGATGAGGTCTTG +
Preference number: 2 (lower is better)
Translates to: RGGQAPACWPLRRAG*FPSLKPLDELDEVL
Trigger: CAAGACCTCATCCAGCTCGTCCAAAGGCTTCAGGGATGGAAACAAACCAGCTCGTCTCAGAGGCCAGCAAGCTGGGGCCTGTCCGCCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
3UTR-3UTR TCA 90 bp ACAGTCCTGAACACCACACGCAATCTCCAAAGGCCATCGCCCCAACCTCACCCCACAGGCCAGGCTGTGTaGTCACCAGCTAGGCAAGGC +
Preference number: 2 (lower is better)
Translates to: TVLNTTRNLQRPSPQPHPTGQAV*SPARQG
Trigger: GCCTTGCCTAGCTGGTGATCACACAGCCTGGCCTGT...GGGGTGAGGTTGGGGCGATGGCCTTTGGAGATTGCGTGTGGTGTTCAGGACTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR-3UTR CCA 90 bp GACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAAGCACAGCATGGGAGGGCATCCACTCGGCATaGGCCCCATGGTGGGAGCCC +
Preference number: 2 (lower is better)
Translates to: DHKVPASVCFRAASTAWEGIHSA*APWWEP
Trigger: GGGCTCCCACCATGGGGCCCATGCCGAGTGGATGCC...CTCCCATGCTGTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
3UTR-3UTR CCA 90 bp TGTTTGTTTCAGAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGCCCAGGAGAGAGGGTaGGGGGCATCCACTCGGCAT +
Preference number: 2 (lower is better)
Translates to: CLFQSGKHSMGVRGSSASAQERG*GASTRH
Trigger: ATGCCGAGTGGATGCCCCCCACCCTCTCTCCTGGGC...TGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTCTGAAACAAACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
3UTR-3UTR CCA 90 bp AGGGTTTGCCGATGTGCTCGTGTCTGTGAAGGGGTTGCTTCCGGTCATCTCCTTCTGGGCCTGGGAATATaGGGGAGCCCCCAGCTAGGC +
Preference number: 2 (lower is better)
Translates to: RVCRCARVCEGVASGHLLLGLGI*GSPQLG
Trigger: GCCTAGCTGGGGGCTCCCCCATATTCCCAGGCCCAG...AAGGAGATGACCGGAAGCAACCCCTTCACAGACACGAGCACATCGGCAAACCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR-3UTR CCA 90 bp TTTGTTTCAGAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGACTGGGCCTGGGAATATaGGGGAGCCCCCAGCTAGGC +
Preference number: 2 (lower is better)
Translates to: FVSERQAQHGSQGVFSLRLGLGI*GSPQLG
Trigger: GCCTAGCTGGGGGCTCCCCCATATTCCCAGGCCCAG...TCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTCTGAAACAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
3UTR-3UTR CCA 90 bp AATGTCCAGAAGGAGCGGGAAGCAAAGGTGGCGGGACACTGCCTGAAAGGCGACTCTGTCTTCTGGGCCTaGGAATATGGGGGAGCCCCC +
Preference number: 2 (lower is better)
Translates to: NVQKEREAKVAGHCLKGDSVFWA*EYGGAP
Trigger: GGGGGCTCCCCCATATTCCCAGGCCCAGAAGACAGA...GTCGCCTTTCAGGCAGTGTCCCGCCACCTTTGCTTCCCGCTCCTTCTGGACATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
3UTR-3UTR CCA 90 bp TGTCCAGAAGGAGCGGGAAGCAAAGGTGGCGGGACACTGCCTGAAAGGCGACAATCTGTCTTCTGGGCCTaGGAATATGGGGGAGCCCCC +
Preference number: 2 (lower is better)
Translates to: CPEGAGSKGGGTLPERRQSVFWA*EYGGAP
Trigger: GGGGGCTCCCCCATATTCCCAGGCCCAGAAGACAGA...TTGTCGCCTTTCAGGCAGTGTCCCGCCACCTTTGCTTCCCGCTCCTTCTGGACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
3UTR-3UTR CCA 90 bp GGATTTCCAGGGCATGGGCTCCCGACTAGAATCTGCCCCTCGCTCATGCTTCTCGCGGCAAGCACAGCATaGGAGTCAGGGGGTCTTCAG +
Preference number: 2 (lower is better)
Translates to: GFPGHGLPTRICPSLMLLAASTA*ESGGLQ
Trigger: CTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGC...GAGAAGCATGAGCGAGGGGCAGATTCTAGTCGGGAGCCCATGCCCTGGAAATCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
3UTR-3UTR CCA 90 bp GGGCTCCCGACTAGAATCTGCCCCTCGCTCATGCTTCTCCCGGCCCCTTTAGACTGGCGCCTGATCTCATaGGACACGATTCAGCGCTCA +
Preference number: 2 (lower is better)
Translates to: GLPTRICPSLMLLPAPLDWRLIS*DTIQRS
Trigger: TGAGCGCTGAATCGTGTCCCATGAGATCAGGCGCCA...GTCTAAAGGGGCCGGGAGAAGCATGAGCGAGGGGCAGATTCTAGTCGGGAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
3UTR-3UTR CCA 90 bp ATGGATTTCCAGGGCATGGGCTCCCGACTAGAATCTGCCCCTCGCTCATGCTTCCCCATTAAGAGCCTGTaGTGGGCGGCCCGGGAGAGT +
Preference number: 2 (lower is better)
Translates to: MDFQGMGSRLESAPRSCFPIKSL*WAARES
Trigger: ACTCTCCCGGGCCGCCCACCACAGGCTCTTAATGGG...GAAGCATGAGCGAGGGGCAGATTCTAGTCGGGAGCCCATGCCCTGGAAATCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
3UTR-3UTR CCA 90 bp GGGGTGGTGCGGGGGCAGGTGGGTTACAGCCTCCACTGGGATCAGGGTTTCAACGCTTCTCAGCATGCCTaGCTTGTCTTGAGCATTCGC +
Preference number: 2 (lower is better)
Translates to: GVVRGQVGYSLHWDQGFNASQHA*LVLSIR
Trigger: GCGAATGCTCAAGACAAGCCAGGCATGCTGAGAAGC...GTTGAAACCCTGATCCCAGTGGAGGCTGTAACCCACCTGCCCCCGCACCACCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR-3UTR CCA 90 bp GTGGAGGAAACACATTCATACCGGGGTGAGGAGTGCTGGCGGGAGACACGGCTCGCAGTGGCCCGATCTTaGTTCACTGCAATCTCCGCC +
Preference number: 2 (lower is better)
Translates to: VEETHSYRGEECWRETRLAVARS*FTAISA
Trigger: GGCGGAGATTGCAGTGAACCAAGATCGGGCCACTGC...GAGCCGTGTCTCCCGCCAGCACTCCTCACCCCGGTATGAATGTGTTTCCTCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR-3UTR TCA 90 bp CATCTCACATGTAGGACTGACCCGGCCCCATTAAGAGCCTGTGGTGGGCGGCCCGTTTGTTTCCATCCCTaGAGCCTTTGGACGAGCTGG +
Preference number: 2 (lower is better)
Translates to: HLTCRTDPAPLRACGGRPVCFHP*SLWTSW
Trigger: CCAGCTCGTCCAAAGGCTTCAGGGATGGAAACAAAC...GGGCCGCCCACCACAGGCTCTTAATGGGGCCGGGTCAGTCCTACATGTGAGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
3UTR-3UTR GCA 90 bp GTGGAGGAAACACATTCATACCGGGGTGAGGAGTGCTGGCGGGAGACACGGCTCAGGCAAGGCTCCAGCTaGGACAAGGACTCCATCTTC +
Preference number: 2 (lower is better)
Translates to: VEETHSYRGEECWRETRLRQGSS*DKDSIF
Trigger: GAAGATGGAGTCCTTGTCGCAGCTGGAGCCTTGCCT...GAGCCGTGTCTCCCGCCAGCACTCCTCACCCCGGTATGAATGTGTTTCCTCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR-3UTR CCA 90 bp TGTCCAGAAGGAGCGGGAAGCAAAGGTGGCGGGACACTGCCTGAAAGGCGACAATCCGGGTCACCCTTCTaGAATCACCAGCTCTCTCCC +
Preference number: 2 (lower is better)
Translates to: CPEGAGSKGGGTLPERRQSGSPF*NHQLSP
Trigger: GGGAGAGAGCTGGTGATTCCAGAAGGGTGACCCGGA...TTGTCGCCTTTCAGGCAGTGTCCCGCCACCTTTGCTTCCCGCTCCTTCTGGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
3UTR-3UTR CCA 90 bp GATCCTGACACCTGGCTTAGAGACAGAGCCCTCCCTACCCTGATCCTCCAAAGCTCTGTCTTCTGGGCCTaGGAATATGGGGGAGCCCCC +
Preference number: 2 (lower is better)
Translates to: DPDTWLRDRALPTLILQSSVFWA*EYGGAP
Trigger: GGGGGCTCCCCCATATTCCCAGGCCCAGAAGACAGA...GCTTTGGAGGATCAGGGTAGGGAGGGCTCTGTCTCTAAGCCAGGTGTCAGGATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
3UTR-3UTR CCA 90 bp TGTTTCAGAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGAGATCTGTCTTCTGGGCCTaGGAATATGGGGGAGCCCCC +
Preference number: 2 (lower is better)
Translates to: CFRAASTAWESGGLQPQRSVFWA*EYGGAP
Trigger: GGGGGCTCCCCCATATTCCCAGGCCCAGAAGACAGA...TCTCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTCTGAAACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
3UTR-3UTR CCA 90 bp CATCTCACATGTAGGACTGACCCGGCCCCATTAAGAGCCTGTGGTGGGCGGCCCCAGCTGGGGGAAGGATaGATTGGCATTTCCAGAGGA +
Preference number: 2 (lower is better)
Translates to: HLTCRTDPAPLRACGGRPQLGEG*IGISRG
Trigger: TCCTCTGGAAATGCCAATCCATCCTTCCCCCAGCTG...GGGCCGCCCACCACAGGCTCTTAATGGGGCCGGGTCAGTCCTACATGTGAGATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
3UTR-3UTR CCA 90 bp AGTAAGGGTTTGGTGCAGGGCTCTGGAATGTCCAGAAGGAGCGGGAAGCAAAGGCCCATTAAGAGCCTGTaGTGGGCGGCCCGGGAGAGT +
Preference number: 2 (lower is better)
Translates to: SKGLVQGSGMSRRSGKQRPIKSL*WAARES
Trigger: ACTCTCCCGGGCCGCCCACCACAGGCTCTTAATGGG...CCTTTGCTTCCCGCTCCTTCTGGACATTCCAGAGCCCTGCACCAAACCCTTACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
3UTR-3UTR CCA 90 bp GTGGAGGAAACACATTCATACCGGGGTGAGGAGTGCTGGCGGGAGACACGGCTCCAACCTGAGCTACCCTaGAAGACGCAAGAGGGCTCA +
Preference number: 2 (lower is better)
Translates to: VEETHSYRGEECWRETRLQPELP*KTQEGS
Trigger: TGAGCCCTCTTGCGTCTTCCAGGGTAGCTCAGGTTG...GAGCCGTGTCTCCCGCCAGCACTCCTCACCCCGGTATGAATGTGTTTCCTCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR-3UTR CCA 90 bp GTGGAGGAAACACATTCATACCGGGGTGAGGAGTGCTGGCGGGAGACACGGCTCTGTGACACTGAAGCCTaGGTCCCAGAAGGGAGCAGA +
Preference number: 2 (lower is better)
Translates to: VEETHSYRGEECWRETRLCDTEA*VPEGSR
Trigger: TCTGCTCCCTTCTGGGACCCAGGCTTCAGTGTCACA...GAGCCGTGTCTCCCGCCAGCACTCCTCACCCCGGTATGAATGTGTTTCCTCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR-3UTR CCA 90 bp ACAGTCCTGAACACCACACGCAATCTCCAAAGGCCATCGCCCCAACCTCACCCCGGGTCACACTCAGCCTaGTCTGGCCTTAACTGGGTG +
Preference number: 2 (lower is better)
Translates to: TVLNTTRNLQRPSPQPHPGSHSA*SGLNWV
Trigger: CACCCAGTTAAGGCCAGACCAGGCTGAGTGTGACCC...GGGGTGAGGTTGGGGCGATGGCCTTTGGAGATTGCGTGTGGTGTTCAGGACTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR-3UTR CCA 90 bp GTGGAGGAAACACATTCATACCGGGGTGAGGAGTGCTGGCGGGAGACACGGCTCTTGAATGTCTGTCCCTaGGTCCACACAGCTGCCTGG +
Preference number: 2 (lower is better)
Translates to: VEETHSYRGEECWRETRLLNVCP*VHTAAW
Trigger: CCAGGCAGCTGTGTGGACCCAGGGACAGACATTCAA...GAGCCGTGTCTCCCGCCAGCACTCCTCACCCCGGTATGAATGTGTTTCCTCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR CAA 90 bp AAACCCACCACGCGCCAAAAGGCGAGTGTGAGCCCTAAGAACAGCTaGTGGGCACAGCTGGCATTTGGAGGAGGAGCCTGGGGAACTGAA +
Preference number: 2 (lower is better)
Translates to: KPTTRQKASVSPKNS*WAQLAFGGGAWGTE
Trigger: TTCAGTTCCCCAGGCTCCTCCTCCAAATGCCAGCTGTGCCCACAAGCTGTTCTTAGGGCTCACACTCGCCTTTTGGCGCGTGGTGGGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR-3UTR TCA 90 bp AAGGTGGCGGGACACTGCCTGAAAGGCGACAACCTAGTGTGGCCACAAGAGAGTGAGGTAGTTCCATCCTaGCCTCTCCAGGCATGGTGG +
Preference number: 2 (lower is better)
Translates to: KVAGHCLKGDNLVWPQESEVVPS*PLQAWW
Trigger: CCACCATGCCTGGAGAGGTCAGGATGGAACTACCTC...ACTCTCTTGTGGCCACACTAGGTTGTCGCCTTTCAGGCAGTGTCCCGCCACCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
3UTR-3UTR TCA 90 bp TCCAGAAATGTCTCTGGTTCGCATAGAGAGGTACCCAACTGGTCTCGGGACTCACCAGGGTGGTCCCACTaGCAGAATCTCAGGGCCGCC +
Preference number: 2 (lower is better)
Translates to: SRNVSGSHREVPNWSRDSPGWSH*QNLRAA
Trigger: GGCGGCCCTGAGATTCTGTCAGTGGGACCACCCTGG...TGAGTCCCGAGACCAGTTGGGTACCTCTCTATGCGAACCAGAGACATTTCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR-3UTR TCA 90 bp GGGGTGGTGCGGGGGCAGGTGGGTTACAGCCTCCACTGGGATCAGGGTTTCAACGAAACCCCTGGTTGGTaGATTCGTTGGTACACTGTT +
Preference number: 2 (lower is better)
Translates to: GVVRGQVGYSLHWDQGFNETPGW*IRWYTV
Trigger: AACAGTGTACCAACGAATTCACCAACCAGGGGTTTC...GTTGAAACCCTGATCCCAGTGGAGGCTGTAACCCACCTGCCCCCGCACCACCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR-3UTR GCA 90 bp GAAAACTGTACAAGGGACAGCAGTCCCAGCCCTGCCATACACAAGAAGACAGAGAGGGCAGCCCAAAGGTaGACAGGGCACCGTGGCGGA +
Preference number: 2 (lower is better)
Translates to: ENCTRDSSPSPAIHKKTERAAQR*TGHRGG
Trigger: TCCGCCACGGTGCCCTGTGCACCTTTGGGCTGCCCT...CTCTGTCTTCTTGTGTATGGCAGGGCTGGGACTGCTGTCCCTTGTACAGTTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
3UTR-3UTR GCA 90 bp GGATTTCCAGGGCATGGGCTCCCGACTAGAATCTGCCCCTCGCTCATGCTTCTCAAGGTGGCGGGACACTaGCTGAAAGGCGACAACCTA +
Preference number: 2 (lower is better)
Translates to: GFPGHGLPTRICPSLMLLKVAGH*LKGDNL
Trigger: TAGGTTGTCGCCTTTCAGGCAGTGTCCCGCCACCTT...GAGAAGCATGAGCGAGGGGCAGATTCTAGTCGGGAGCCCATGCCCTGGAAATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
3UTR-3UTR GCA 90 bp ACAGTCCTGAACACCACACGCAATCTCCAAAGGCCATCGCCCCAACCTCACCCCTCACCCAAGCTGGAGTaGAGTGGCCCGATCTTGGTT +
Preference number: 2 (lower is better)
Translates to: TVLNTTRNLQRPSPQPHPSPKLE*SGPILV
Trigger: AACCAAGATCGGGCCACTGCACTCCAGCTTGGGTGA...GGGGTGAGGTTGGGGCGATGGCCTTTGGAGATTGCGTGTGGTGTTCAGGACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR-3UTR CCA 90 bp CAGATGGCGCCTGATCTCATGGGACACGATTCAGCGCTCAATTTGGGGCTAATTCTGGGCCTGGGAATATaGGGGAGCCCCCAGCTAGGC +
Preference number: 2 (lower is better)
Translates to: QMAPDLMGHDSALNLGLILGLGI*GSPQLG
Trigger: GCCTAGCTGGGGGCTCCCCCATATTCCCAGGCCCAG...AATTAGCCCCAAATTGAGCGCTGAATCGTGTCCCATGAGATCAGGCGCCATCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
3UTR-3UTR CCA 90 bp CCAAACAGCAGCACTGAAAGCTTCCCAAGTCACACTCAGACCAGACTTTTCCAGGTGCACAGGGCACCGTaGCGGACAGGCCCCAGCTTG +
Preference number: 2 (lower is better)
Translates to: PNSSTESFPSHTQTRLFQVHRAP*RTGPSL
Trigger: CAAGCTGGGGCCTGTCCGCCACGGTGCCCTGTGCAC...CTGGAAAAGTCTGGTCTGAGTGTGACTTGGGAAGCTTTCAGTGCTGCTGTTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
3UTR-3UTR CCA 90 bp GTGGAGGAAACACATTCATACCGGGGTGAGGAGTGCTGGCGGGAGACACGGCTCCCTCCAAAAATGGACTaGCCCAAACTGGGCCAACCT +
Preference number: 2 (lower is better)
Translates to: VEETHSYRGEECWRETRLPPKMD*PKLGQP
Trigger: AGGTTGGCCCAGTTTGGGCCAGTCCATTTTTGGAGG...GAGCCGTGTCTCCCGCCAGCACTCCTCACCCCGGTATGAATGTGTTTCCTCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR-3UTR CCA 90 bp GTGGAGGAAACACATTCATACCGGGGTGAGGAGTGCTGGCGGGAGACACGGCTCAGGGAGCAGATCTGCTaGCTGAGATGCAAGCTTCAG +
Preference number: 2 (lower is better)
Translates to: VEETHSYRGEECWRETRLREQIC*LRCKLQ
Trigger: CTGAAGCTTGCATCTCAGCCAGCAGATCTGCTCCCT...GAGCCGTGTCTCCCGCCAGCACTCCTCACCCCGGTATGAATGTGTTTCCTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR CAA 90 bp CTGGCTGAGATGCAAGCTTCAGGTTGCAGCAGACGTGAGCAGCAATaGAGCACCCATCCGTCCCTTCCCCTCCCATCCCTGGATTCTTTC +
Preference number: 2 (lower is better)
Translates to: LAEMQASGCSRREQQ*STHPSLPLPSLDSF
Trigger: GAAAGAATCCAGGGATGGGAGGGGAAGGGACGGATGGGTGCTCAATTGCTGCTCACGTCTGCTGCAACCTGAAGCTTGCATCTCAGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR-3UTR GCA 90 bp CCAAACAGCAGCACTGAAAGCTTCCCAAGTCACACTCAGACCAGACTTTTCCAGAGGGCAGCCCAAAGGTaGACAGGGCACCGTGGCGGA +
Preference number: 2 (lower is better)
Translates to: PNSSTESFPSHTQTRLFQRAAQR*TGHRGG
Trigger: TCCGCCACGGTGCCCTGTGCACCTTTGGGCTGCCCT...CTGGAAAAGTCTGGTCTGAGTGTGACTTGGGAAGCTTTCAGTGCTGCTGTTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
3UTR-3UTR GCA 90 bp CCGACTAGAATCTGCCCCTCGCTCATGCTTCTCCCGGCCCCTTTAGACTCTTTAGGCCACAAGAGAGTCTaGTATGCCTGTCCAGTGCCC +
Preference number: 2 (lower is better)
Translates to: PTRICPSLMLLPAPLDSLGHKRV*YACPVP
Trigger: GGGCACTGGACAGGCATAGCAGACTCTCTTGTGGCC...TAAAGAGTCTAAAGGGGCCGGGAGAAGCATGAGCGAGGGGCAGATTCTAGTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
3UTR-3UTR GCA 90 bp AGGGTTTGCCGATGTGCTCGTGTCTGTGAAGGGGTTGCTTCCGGTCATCTCCTTGTGTGGTCCTGTCCCTaGCACCATGTACCACCATCC +
Preference number: 2 (lower is better)
Translates to: RVCRCARVCEGVASGHLLVWSCP*HHVPPS
Trigger: GGATGGTGGTACATGGTGGCAGGGACAGGACCACAC...AAGGAGATGACCGGAAGCAACCCCTTCACAGACACGAGCACATCGGCAAACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR-3UTR CCA 90 bp CCAAACAGCAGCACTGAAAGCTTCCCAAGTCACACTCAGACCAGACTTTTCCAGGCCCAGGAGAGAGGGTaGGGGGCATCCACTCGGCAT +
Preference number: 2 (lower is better)
Translates to: PNSSTESFPSHTQTRLFQAQERG*GASTRH
Trigger: ATGCCGAGTGGATGCCCCCCACCCTCTCTCCTGGGC...CTGGAAAAGTCTGGTCTGAGTGTGACTTGGGAAGCTTTCAGTGCTGCTGTTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
3UTR-3UTR CCA 90 bp TACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCGCCCAGGAGAGAGGGTaGGGGGCATCCACTCGGCAT +
Preference number: 2 (lower is better)
Translates to: YKTRQGPQSSSLCLFQSGAQERG*GASTRH
Trigger: ATGCCGAGTGGATGCCCCCCACCCTCTCTCCTGGGC...GCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
3UTR-3UTR CCA 90 bp ACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCACTGGGCCTGGGAATATaGGGGAGCCCCCAGCTAGGC +
Preference number: 2 (lower is better)
Translates to: TKLGKDHKVPASVCFRAALGLGI*GSPQLG
Trigger: GCCTAGCTGGGGGCTCCCCCATATTCCCAGGCCCAG...TGCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
3UTR-3UTR CCA 90 bp ACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTCTGGGCCTGGGAATATaGGGGAGCCCCCAGCTAGGC +
Preference number: 2 (lower is better)
Translates to: TVTPTKLGKDHKVPASVCLGLGI*GSPQLG
Trigger: GCCTAGCTGGGGGCTCCCCCATATTCCCAGGCCCAG...ACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
3UTR-3UTR CCA 90 bp GACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAAGCACAGCATGGGAGTCTGTCTTCTGGGCCTaGGAATATGGGGGAGCCCCC +
Preference number: 2 (lower is better)
Translates to: DHKVPASVCFRAASTAWESVFWA*EYGGAP
Trigger: GGGGGCTCCCCCATATTCCCAGGCCCAGAAGACAGA...CTCCCATGCTGTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
3UTR-3UTR CCA 90 bp GGATCCAGAAATGTCTCTGGTTCGCATAGAGAGGTACCCAACTGGTCTCGGGACGCGGCAAGCACAGCATaGGAGTCAGGGGGTCTTCAG +
Preference number: 2 (lower is better)
Translates to: GSRNVSGSHREVPNWSRDAASTA*ESGGLQ
Trigger: CTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGC...GTCCCGAGACCAGTTGGGTACCTCTCTATGCGAACCAGAGACATTTCTGGATCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR-3UTR CCA 90 bp CTGAGACGAGCTGGTTTGTTTCCATCCCTGAAGCCTTTGGACGAGCTGGATGAGCAGGCATGGTGGGTCTaGGAAGACAGGAGCCAAGCC +
Preference number: 2 (lower is better)
Translates to: LRRAGLFPSLKPLDELDEQAWWV*EDRSQA
Trigger: GGCTTGGCTCCTGTCTTCCCAGACCCACCATGCCTG...CTCATCCAGCTCGTCCAAAGGCTTCAGGGATGGAAACAAACCAGCTCGTCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
3UTR-3UTR CCA 90 bp TGTCCAGAAGGAGCGGGAAGCAAAGGTGGCGGGACACTGCCTGAAAGGCGACAACAGCTGGGGGAAGGATaGATTGGCATTTCCAGAGGA +
Preference number: 2 (lower is better)
Translates to: CPEGAGSKGGGTLPERRQQLGEG*IGISRG
Trigger: TCCTCTGGAAATGCCAATCCATCCTTCCCCCAGCTG...TTGTCGCCTTTCAGGCAGTGTCCCGCCACCTTTGCTTCCCGCTCCTTCTGGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
3UTR-3UTR CCA 90 bp GAAAACTGTACAAGGGACAGCAGTCCCAGCCCTGCCATACACAAGAAGACAGAGCAGGCCCCAGCTTGCTaGCCTCTGAGACGAGCTGGT +
Preference number: 2 (lower is better)
Translates to: ENCTRDSSPSPAIHKKTEQAPAC*PLRRAG
Trigger: ACCAGCTCGTCTCAGAGGCCAGCAAGCTGGGGCCTG...CTCTGTCTTCTTGTGTATGGCAGGGCTGGGACTGCTGTCCCTTGTACAGTTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
3UTR-3UTR CCA 90 bp GAAAACTGTACAAGGGACAGCAGTCCCAGCCCTGCCATACACAAGAAGACAGAGCCCATTAAGAGCCTGTaGTGGGCGGCCCGGGAGAGT +
Preference number: 2 (lower is better)
Translates to: ENCTRDSSPSPAIHKKTEPIKSL*WAARES
Trigger: ACTCTCCCGGGCCGCCCACCACAGGCTCTTAATGGG...CTCTGTCTTCTTGTGTATGGCAGGGCTGGGACTGCTGTCCCTTGTACAGTTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
3UTR-3UTR CCA 90 bp AATGTCCAGAAGGAGCGGGAAGCAAAGGTGGCGGGACACTGCCTGAAAGGCGACGAAGACAGAGCCATCTaGGGGATGGCAAAGACTTGC +
Preference number: 2 (lower is better)
Translates to: NVQKEREAKVAGHCLKGDEDRAI*GMAKTC
Trigger: GCAAGTCTTTGCCATCCCCCAGATGGCTCTGTCTTC...GTCGCCTTTCAGGCAGTGTCCCGCCACCTTTGCTTCCCGCTCCTTCTGGACATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
3UTR-3UTR CCA 90 bp GTGGAGGAAACACATTCATACCGGGGTGAGGAGTGCTGGCGGGAGACACGGCTCTTCCCCTCCCATCCCTaGATTCTTTCTGCACTACCA +
Preference number: 2 (lower is better)
Translates to: VEETHSYRGEECWRETRLFPSHP*ILSALP
Trigger: TGGTAGTGCAGAAAGAATCCAGGGATGGGAGGGGAA...GAGCCGTGTCTCCCGCCAGCACTCCTCACCCCGGTATGAATGTGTTTCCTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR-3UTR TCA 90 bp TGTCCAGAAGGAGCGGGAAGCAAAGGTGGCGGGACACTGCCTGAAAGGCGACAATTTACAGATGGCGCCTaGTCTCATGGGACACGATTC +
Preference number: 2 (lower is better)
Translates to: CPEGAGSKGGGTLPERRQFTDGA*SHGTRF
Trigger: GAATCGTGTCCCATGAGATCAGGCGCCATCTGTAAA...TTGTCGCCTTTCAGGCAGTGTCCCGCCACCTTTGCTTCCCGCTCCTTCTGGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
3UTR-3UTR TCA 90 bp AAGGTGGCGGGACACTGCCTGAAAGGCGACAACCTAGTGTGGCCACAAGAGAGTGTTTGTTTCCATCCCTaGAGCCTTTGGACGAGCTGG +
Preference number: 2 (lower is better)
Translates to: KVAGHCLKGDNLVWPQESVCFHP*SLWTSW
Trigger: CCAGCTCGTCCAAAGGCTTCAGGGATGGAAACAAAC...ACTCTCTTGTGGCCACACTAGGTTGTCGCCTTTCAGGCAGTGTCCCGCCACCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
3UTR-3UTR TCA 90 bp AGTAAGGGTTTGGTGCAGGGCTCTGGAATGTCCAGAAGGAGCGGGAAGCAAAGGCAGCTTGCTGGCCTCTaGGACGAGCTGGTTTGTTTC +
Preference number: 2 (lower is better)
Translates to: SKGLVQGSGMSRRSGKQRQLAGL*DELVCF
Trigger: GAAACAAACCAGCTCGTCTCAGAGGCCAGCAAGCTG...CCTTTGCTTCCCGCTCCTTCTGGACATTCCAGAGCCCTGCACCAAACCCTTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
3UTR-3UTR TCA 90 bp GGGGTGGTGCGGGGGCAGGTGGGTTACAGCCTCCACTGGGATCAGGGTTTCAACGGTCAATGGGAAAGATaGAGAAAGATGGATTTCCAG +
Preference number: 2 (lower is better)
Translates to: GVVRGQVGYSLHWDQGFNGQWER*RKMDFQ
Trigger: CTGGAAATCCATCTTTCTTCATCTTTCCCATTGACC...GTTGAAACCCTGATCCCAGTGGAGGCTGTAACCCACCTGCCCCCGCACCACCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR-3UTR GCA 90 bp ATGGATTTCCAGGGCATGGGCTCCCGACTAGAATCTGCCCCTCGCTCATGCTTCGCTATGCCTGTCCAGTaGCCACCAGTGACAGAAAAC +
Preference number: 2 (lower is better)
Translates to: MDFQGMGSRLESAPRSCFAMPVQ*PPVTEN
Trigger: GTTTTCTGTCACTGGTGGGCACTGGACAGGCATAGC...GAAGCATGAGCGAGGGGCAGATTCTAGTCGGGAGCCCATGCCCTGGAAATCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
3UTR-3UTR GCA 90 bp ACAGTCCTGAACACCACACGCAATCTCCAAAGGCCATCGCCCCAACCTCACCCCATGCAAGCTTCAGGTTaGAGCAGACGTGAGCAGCAA +
Preference number: 2 (lower is better)
Translates to: TVLNTTRNLQRPSPQPHPMQASG*SRREQQ
Trigger: TTGCTGCTCACGTCTGCTGCAACCTGAAGCTTGCAT...GGGGTGAGGTTGGGGCGATGGCCTTTGGAGATTGCGTGTGGTGTTCAGGACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR-3UTR GCA 90 bp ACAGTCCTGAACACCACACGCAATCTCCAAAGGCCATCGCCCCAACCTCACCCCAGAAGGGAGCAGATCTaGTGGCTGAGATGCAAGCTT +
Preference number: 2 (lower is better)
Translates to: TVLNTTRNLQRPSPQPHPRREQI*WLRCKL
Trigger: AAGCTTGCATCTCAGCCAGCAGATCTGCTCCCTTCT...GGGGTGAGGTTGGGGCGATGGCCTTTGGAGATTGCGTGTGGTGTTCAGGACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR-3UTR CCA 90 bp CTGAGACGAGCTGGTTTGTTTCCATCCCTGAAGCCTTTGGACGAGCTGGATGAGTCCGGGTCACCCTTCTaGAATCACCAGCTCTCTCCC +
Preference number: 2 (lower is better)
Translates to: LRRAGLFPSLKPLDELDESGSPF*NHQLSP
Trigger: GGGAGAGAGCTGGTGATTCCAGAAGGGTGACCCGGA...CTCATCCAGCTCGTCCAAAGGCTTCAGGGATGGAAACAAACCAGCTCGTCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
3UTR-3UTR CCA 90 bp TCCAGAAATGTCTCTGGTTCGCATAGAGAGGTACCCAACTGGTCTCGGGACTCATCTGTCTTCTGGGCCTaGGAATATGGGGGAGCCCCC +
Preference number: 2 (lower is better)
Translates to: SRNVSGSHREVPNWSRDSSVFWA*EYGGAP
Trigger: GGGGGCTCCCCCATATTCCCAGGCCCAGAAGACAGA...TGAGTCCCGAGACCAGTTGGGTACCTCTCTATGCGAACCAGAGACATTTCTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR-3UTR CCA 90 bp GTTGAATTCTGCCCTCACTGCAGATGTGCAGGTCAAACCCAAAGTGGTCAATGGATTAAGAGCCTGTGGTaGGCGGCCCGGGAGAGTGGG +
Preference number: 2 (lower is better)
Translates to: VEFCPHCRCAGQTQSGQWIKSLW*AARESG
Trigger: CCCACTCTCCCGGGCCGCCCACCACAGGCTCTTAAT...CCATTGACCACTTTGGGTTTGACCTGCACATCTGCAGTGAGGGCAGAATTCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
3UTR-3UTR CCA 90 bp ATGGATTTCCAGGGCATGGGCTCCCGACTAGAATCTGCCCCTCGCTCATGCTTCGAAGACAGAGCCATCTaGGGGATGGCAAAGACTTGC +
Preference number: 2 (lower is better)
Translates to: MDFQGMGSRLESAPRSCFEDRAI*GMAKTC
Trigger: GCAAGTCTTTGCCATCCCCCAGATGGCTCTGTCTTC...GAAGCATGAGCGAGGGGCAGATTCTAGTCGGGAGCCCATGCCCTGGAAATCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
3UTR-3UTR CCA 90 bp GGATCCAGAAATGTCTCTGGTTCGCATAGAGAGGTACCCAACTGGTCTCGGGACGGGTCACACTCAGCCTaGTCTGGCCTTAACTGGGTG +
Preference number: 2 (lower is better)
Translates to: GSRNVSGSHREVPNWSRDGSHSA*SGLNWV
Trigger: CACCCAGTTAAGGCCAGACCAGGCTGAGTGTGACCC...GTCCCGAGACCAGTTGGGTACCTCTCTATGCGAACCAGAGACATTTCTGGATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR-3UTR TCA 90 bp CAGAAACGGGCCCCTGTTCATACGGATAGGGGTTCTGGACTGTTGACTCTAGCCTCCAGTGCCCACCAGTaGCAGAAAACTGTACAAGGG +
Preference number: 2 (lower is better)
Translates to: QKRAPVHTDRGSGLLTLASSAHQ*QKTVQG
Trigger: CCCTTGTACAGTTTTCTGTCACTGGTGGGCACTGGA...GGCTAGAGTCAACAGTCCAGAACCCCTATCCGTATGAACAGGGGCCCGTTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR-3UTR GCA 90 bp AGGGTTTGCCGATGTGCTCGTGTCTGTGAAGGGGTTGCTTCCGGTCATCTCCTTCAGCAGTCCCAGCCCTaGCATACACAAGAAGACAGA +
Preference number: 2 (lower is better)
Translates to: RVCRCARVCEGVASGHLLQQSQP*HTQEDR
Trigger: TCTGTCTTCTTGTGTATGGCAGGGCTGGGACTGCTG...AAGGAGATGACCGGAAGCAACCCCTTCACAGACACGAGCACATCGGCAAACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR-3UTR GCA 90 bp ACAGTCCTGAACACCACACGCAATCTCCAAAGGCCATCGCCCCAACCTCACCCCGTGCTTGTTGAATTCTaGCCTCACTGCAGATGTGCA +
Preference number: 2 (lower is better)
Translates to: TVLNTTRNLQRPSPQPHPVLVEF*PHCRCA
Trigger: TGCACATCTGCAGTGAGGGCAGAATTCAACAAGCAC...GGGGTGAGGTTGGGGCGATGGCCTTTGGAGATTGCGTGTGGTGTTCAGGACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR-3UTR CCA 90 bp GCACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCTCCGGGTCACCCTTCTaGAATCACCAGCTCTCTCCC +
Preference number: 2 (lower is better)
Translates to: AQACDSDPYKTRQGPQSSSGSPF*NHQLSP
Trigger: GGGAGAGAGCTGGTGATTCCAGAAGGGTGACCCGGA...GGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
3UTR-3UTR CCA 90 bp GACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTCCGGGTCACCCTTCTaGAATCACCAGCTCTCTCCC +
Preference number: 2 (lower is better)
Translates to: DSDPYKTRQGPQSSSLCLSGSPF*NHQLSP
Trigger: GGGAGAGAGCTGGTGATTCCAGAAGGGTGACCCGGA...CAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
3UTR-3UTR CCA 90 bp AGTGACAGAAAACTGTACAAGGGACAGCAGTCCCAGCCCTGCCATACACAAGAACAGGCATGGTGGGTCTaGGAAGACAGGAGCCAAGCC +
Preference number: 2 (lower is better)
Translates to: SDRKLYKGQQSQPCHTQEQAWWV*EDRSQA
Trigger: GGCTTGGCTCCTGTCTTCCCAGACCCACCATGCCTG...TTCTTGTGTATGGCAGGGCTGGGACTGCTGTCCCTTGTACAGTTTTCTGTCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
3UTR-3UTR CCA 90 bp GTGGAGGAAACACATTCATACCGGGGTGAGGAGTGCTGGCGGGAGACACGGCTCTCTAAAATTGGTAGCTaGTGTCATGACCCAACCCCA +
Preference number: 2 (lower is better)
Translates to: VEETHSYRGEECWRETRLSKIGS*CHDPTP
Trigger: TGGGGTTGGGTCATGACACCAGCTACCAATTTTAGA...GAGCCGTGTCTCCCGCCAGCACTCCTCACCCCGGTATGAATGTGTTTCCTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR-3UTR CCA 90 bp AGGGTTTGCCGATGTGCTCGTGTCTGTGAAGGGGTTGCTTCCGGTCATCTCCTTAGAGAGGTACCCAACTaGTCTCGGGACTCACCTTTC +
Preference number: 2 (lower is better)
Translates to: RVCRCARVCEGVASGHLLREVPN*SRDSPF
Trigger: GAAAGGTGAGTCCCGAGACCAGTTGGGTACCTCTCT...AAGGAGATGACCGGAAGCAACCCCTTCACAGACACGAGCACATCGGCAAACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR-3UTR TCA 90 bp CAAAGACTTGCCCTAACCCATCTCACATGTAGGACTGACCCGGCCCCATTAAGACAGCTTGCTGGCCTCTaGGACGAGCTGGTTTGTTTC +
Preference number: 2 (lower is better)
Translates to: QRLALTHLTCRTDPAPLRQLAGL*DELVCF
Trigger: GAAACAAACCAGCTCGTCTCAGAGGCCAGCAAGCTG...TCTTAATGGGGCCGGGTCAGTCCTACATGTGAGATGGGTTAGGGCAAGTCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
3UTR-3UTR TCA 90 bp GGATCCAGAAATGTCTCTGGTTCGCATAGAGAGGTACCCAACTGGTCTCGGGACCAATGCCAAGGTTGCTaGCCGGTAAGACCCCTGAAA +
Preference number: 2 (lower is better)
Translates to: GSRNVSGSHREVPNWSRDQCQGC*PVRPLK
Trigger: TTTCAGGGGTCTTACCGGTCAGCAACCTTGGCATTG...GTCCCGAGACCAGTTGGGTACCTCTCTATGCGAACCAGAGACATTTCTGGATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR-3UTR GCA 90 bp CAGAAACGGGCCCCTGTTCATACGGATAGGGGTTCTGGACTGTTGACTCTAGCCGGGATGGCAAAGACTTaGCCTAACCCATCTCACATG +
Preference number: 2 (lower is better)
Translates to: QKRAPVHTDRGSGLLTLAGMAKT*PNPSHM
Trigger: CATGTGAGATGGGTTAGGGCAAGTCTTTGCCATCCC...GGCTAGAGTCAACAGTCCAGAACCCCTATCCGTATGAACAGGGGCCCGTTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR-3UTR GCA 90 bp GGATCCAGAAATGTCTCTGGTTCGCATAGAGAGGTACCCAACTGGTCTCGGGACACAACCCGGATAGCGTaGTTGCCTCTCCAAAGTGCA +
Preference number: 2 (lower is better)
Translates to: GSRNVSGSHREVPNWSRDTTRIA*LPLQSA
Trigger: TGCACTTTGGAGAGGCAAGCACGCTATCCGGGTTGT...GTCCCGAGACCAGTTGGGTACCTCTCTATGCGAACCAGAGACATTTCTGGATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR-3UTR CCA 90 bp AGGGTTTGCCGATGTGCTCGTGTCTGTGAAGGGGTTGCTTCCGGTCATCTCCTTGCCTCTGAGACGAGCTaGTTTGTTTCCATCCCTGAA +
Preference number: 2 (lower is better)
Translates to: RVCRCARVCEGVASGHLLASETS*FVSIPE
Trigger: TTCAGGGATGGAAACAAACCAGCTCGTCTCAGAGGC...AAGGAGATGACCGGAAGCAACCCCTTCACAGACACGAGCACATCGGCAAACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR-3UTR CCA 90 bp TCCAGAAATGTCTCTGGTTCGCATAGAGAGGTACCCAACTGGTCTCGGGACTCAGAGCCATCTGGGGGATaGCAAAGACTTGCCCTAACC +
Preference number: 2 (lower is better)
Translates to: SRNVSGSHREVPNWSRDSEPSGG*QRLALT
Trigger: GGTTAGGGCAAGTCTTTGCCATCCCCCAGATGGCTC...TGAGTCCCGAGACCAGTTGGGTACCTCTCTATGCGAACCAGAGACATTTCTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR CAA 90 bp GTTGCCGGTGGCCTGAGACACTCATCTAGAACAAACACCCTCAGCTaGCAGATGAAGCAACAGATCCAGGAAAGCATCATGATGAGCCCC +
Preference number: 2 (lower is better)
Translates to: VAGGLRHSSRTNTLS*QMKQQIQESIMMSP
Trigger: GGGGCTCATCATGATGCTTTCCTGGATCTGTTGCTTCATCTGCAAGCTGAGGGTGTTTGTTCTAGATGAGTGTCTCAGGCCACCGGCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR-3UTR TCA 90 bp ACCAGTGAGTTGTGCTTGTTGAATTCTGCCCTCACTGCAGATGTGCAGGTCAAAGGTGCGGCTGTGAGCTaGATGGCACCTTCTACCCAT +
Preference number: 2 (lower is better)
Translates to: TSELCLLNSALTADVQVKGAAVS*MAPSTH
Trigger: ATGGGTAGAAGGTGCCATTCAGCTCACAGCCGCACC...TTTGACCTGCACATCTGCAGTGAGGGCAGAATTCAACAAGCACAACTCACTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
3UTR-3UTR TCA 90 bp GAAAACTGTACAAGGGACAGCAGTCCCAGCCCTGCCATACACAAGAAGACAGAGGTTTGTTTCCATCCCTaGAGCCTTTGGACGAGCTGG +
Preference number: 2 (lower is better)
Translates to: ENCTRDSSPSPAIHKKTEVCFHP*SLWTSW
Trigger: CCAGCTCGTCCAAAGGCTTCAGGGATGGAAACAAAC...CTCTGTCTTCTTGTGTATGGCAGGGCTGGGACTGCTGTCCCTTGTACAGTTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
3UTR-3UTR GCA 90 bp AGGGTTTGCCGATGTGCTCGTGTCTGTGAAGGGGTTGCTTCCGGTCATCTCCTTCTCGCTCTAACCTGCTaGAATGGGAATTGCTTCTTC +
Preference number: 2 (lower is better)
Translates to: RVCRCARVCEGVASGHLLLALTC*NGNCFF
Trigger: GAAGAAGCAATTCCCATTGCAGCAGGTTAGAGCGAG...AAGGAGATGACCGGAAGCAACCCCTTCACAGACACGAGCACATCGGCAAACCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR-3UTR CCA 90 bp ACCAGTGAGTTGTGCTTGTTGAATTCTGCCCTCACTGCAGATGTGCAGGTCAAATCCGGGTCACCCTTCTaGAATCACCAGCTCTCTCCC +
Preference number: 2 (lower is better)
Translates to: TSELCLLNSALTADVQVKSGSPF*NHQLSP
Trigger: GGGAGAGAGCTGGTGATTCCAGAAGGGTGACCCGGA...TTTGACCTGCACATCTGCAGTGAGGGCAGAATTCAACAAGCACAACTCACTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
3UTR-3UTR CCA 90 bp GAAAACTGTACAAGGGACAGCAGTCCCAGCCCTGCCATACACAAGAAGACAGAGTCTGATCCTGACACCTaGCTTAGAGACAGAGCCCTC +
Preference number: 2 (lower is better)
Translates to: ENCTRDSSPSPAIHKKTESDPDT*LRDRAL
Trigger: GAGGGCTCTGTCTCTAAGCCAGGTGTCAGGATCAGA...CTCTGTCTTCTTGTGTATGGCAGGGCTGGGACTGCTGTCCCTTGTACAGTTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
3UTR-3UTR CCA 90 bp GCCAAGGTCGCTGATGTCCTTCGAATGTTATGGCTTGTATTTCCAAAAGGGACTCCTCTCCAGGCATGGTaGGTCTGGGAAGACAGGAGC +
Preference number: 2 (lower is better)
Translates to: AKVADVLRMLWLVFPKGTPLQAW*VWEDRS
Trigger: GCTCCTGTCTTCCCAGACCCACCATGCCTGGAGAGG...AGTCCCTTTTGGAAATACAAGCCATAACATTCGAAGGACATCAGCGACCTTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR-3UTR CCA 90 bp AGTGACAGAAAACTGTACAAGGGACAGCAGTCCCAGCCCTGCCATACACAAGAAGAGCCATCTGGGGGATaGCAAAGACTTGCCCTAACC +
Preference number: 2 (lower is better)
Translates to: SDRKLYKGQQSQPCHTQEEPSGG*QRLALT
Trigger: GGTTAGGGCAAGTCTTTGCCATCCCCCAGATGGCTC...TTCTTGTGTATGGCAGGGCTGGGACTGCTGTCCCTTGTACAGTTTTCTGTCACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
3UTR-3UTR CCA 90 bp GTTGAATTCTGCCCTCACTGCAGATGTGCAGGTCAAACCCAAAGTGGTCAATGGTTTGGTGCAGGGCTCTaGAATGTCCAGAAGGAGCGG +
Preference number: 2 (lower is better)
Translates to: VEFCPHCRCAGQTQSGQWFGAGL*NVQKER
Trigger: CCGCTCCTTCTGGACATTCCAGAGCCCTGCACCAAA...CCATTGACCACTTTGGGTTTGACCTGCACATCTGCAGTGAGGGCAGAATTCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
3UTR-3UTR CCA 90 bp ACAGTCCTGAACACCACACGCAATCTCCAAAGGCCATCGCCCCAACCTCACCCCTCACAGCAACCAACTTaGAACACCATTTGGCTTAAG +
Preference number: 2 (lower is better)
Translates to: TVLNTTRNLQRPSPQPHPSQQPT*NTIWLK
Trigger: CTTAAGCCAAATGGTGTTCCAAGTTGGTTGCTGTGA...GGGGTGAGGTTGGGGCGATGGCCTTTGGAGATTGCGTGTGGTGTTCAGGACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR-3UTR TCA 90 bp GAAAACTGTACAAGGGACAGCAGTCCCAGCCCTGCCATACACAAGAAGACAGAGGTGATGAACAGTGGCTaGGAAAGCCAGATGTGGACT +
Preference number: 2 (lower is better)
Translates to: ENCTRDSSPSPAIHKKTEVMNSG*ESQMWT
Trigger: AGTCCACATCTGGCTTTCTCAGCCACTGTTCATCAC...CTCTGTCTTCTTGTGTATGGCAGGGCTGGGACTGCTGTCCCTTGTACAGTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
3UTR-3UTR TCA 90 bp ACCAGTGAGTTGTGCTTGTTGAATTCTGCCCTCACTGCAGATGTGCAGGTCAAACAGCTTGCTGGCCTCTaGGACGAGCTGGTTTGTTTC +
Preference number: 2 (lower is better)
Translates to: TSELCLLNSALTADVQVKQLAGL*DELVCF
Trigger: GAAACAAACCAGCTCGTCTCAGAGGCCAGCAAGCTG...TTTGACCTGCACATCTGCAGTGAGGGCAGAATTCAACAAGCACAACTCACTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
3UTR-3UTR TCA 90 bp ACAGTCCTGAACACCACACGCAATCTCCAAAGGCCATCGCCCCAACCTCACCCCCAAGGCTATTGGCTTTaGATGTTTGGAAATCATCCA +
Preference number: 2 (lower is better)
Translates to: TVLNTTRNLQRPSPQPHPQGYWL*MFGNHP
Trigger: TGGATGATTTCCAAACATTCAAAGCCAATAGCCTTG...GGGGTGAGGTTGGGGCGATGGCCTTTGGAGATTGCGTGTGGTGTTCAGGACTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR-3UTR TCA 90 bp TCCAGAAATGTCTCTGGTTCGCATAGAGAGGTACCCAACTGGTCTCGGGACTCAACTCTATCCCAGGGATaGACAGAGGACTCTGGAATC +
Preference number: 2 (lower is better)
Translates to: SRNVSGSHREVPNWSRDSTLSQG*TEDSGI
Trigger: GATTCCAGAGTCCTCTGTTCATCCCTGGGATAGAGT...TGAGTCCCGAGACCAGTTGGGTACCTCTCTATGCGAACCAGAGACATTTCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR-3UTR TCA 90 bp GCCAAGGTCGCTGATGTCCTTCGAATGTTATGGCTTGTATTTCCAAAAGGGACTATTGGATATGGGCCGTaGGGGTCTGGTGACCAGGTG +
Preference number: 2 (lower is better)
Translates to: AKVADVLRMLWLVFPKGTIGYGP*GSGDQV
Trigger: CACCTGGTCACCAGACCCTCACGGCCCATATCCAAT...AGTCCCTTTTGGAAATACAAGCCATAACATTCGAAGGACATCAGCGACCTTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR-3UTR TCA 90 bp AGGGTTTGCCGATGTGCTCGTGTCTGTGAAGGGGTTGCTTCCGGTCATCTCCTTCTCACTGGTTACCCTTaGGCTTCACTTTCCTATTTG +
Preference number: 2 (lower is better)
Translates to: RVCRCARVCEGVASGHLLLTGYP*ASLSYL
Trigger: CAAATAGGAAAGTGAAGCTCAAGGGTAACCAGTGAG...AAGGAGATGACCGGAAGCAACCCCTTCACAGACACGAGCACATCGGCAAACCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR-3UTR TCA 90 bp GTGGAGGAAACACATTCATACCGGGGTGAGGAGTGCTGGCGGGAGACACGGCTCCACTCATCTAGTAATTaGTTGGTTTTCACAAAGGGT +
Preference number: 2 (lower is better)
Translates to: VEETHSYRGEECWRETRLHSSSN*LVFTKG
Trigger: ACCCTTTGTGAAAACCAATCAATTACTAGATGAGTG...GAGCCGTGTCTCCCGCCAGCACTCCTCACCCCGGTATGAATGTGTTTCCTCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR-3UTR GCA 90 bp AATTCTGCCCTCACTGCAGATGTGCAGGTCAAACCCAAAGTGGTCAATGGGAAACAAGAGAGTCTGCTATaGCTGTCCAGTGCCCACCAG +
Preference number: 2 (lower is better)
Translates to: NSALTADVQVKPKVVNGKQESLL*LSSAHQ
Trigger: CTGGTGGGCACTGGACAGGCATAGCAGACTCTCTTG...TTTCCCATTGACCACTTTGGGTTTGACCTGCACATCTGCAGTGAGGGCAGAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
3UTR-3UTR GCA 90 bp GGATCCAGAAATGTCTCTGGTTCGCATAGAGAGGTACCCAACTGGTCTCGGGACCCTTCTTGTCCATGCTaGTTCTGCTCGCCTTTCAAA +
Preference number: 2 (lower is better)
Translates to: GSRNVSGSHREVPNWSRDPSCPC*FCSPFK
Trigger: TTTGAAAGGCGAGCAGAAGCAGCATGGACAAGAAGG...GTCCCGAGACCAGTTGGGTACCTCTCTATGCGAACCAGAGACATTTCTGGATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR-3UTR CCA 90 bp AAAATCTTGTTGCTGTCTACCTTCCATCCAACAGGTAAATGCCTCACGACGGTGGATCCTCCAAAGCCCTaGAGACAAGGGAGCCAGCTG +
Preference number: 2 (lower is better)
Translates to: KILLLSTFHPTGKCLTTVDPPKP*RQGSQL
Trigger: CAGCTGGCTCCCTTGTCTCCAGGGCTTTGGAGGATC...CACCGTCGTGAGGCATTTACCTGTTGGATGGAAGGTAGACAGCAACAAGATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR-3UTR CCA 90 bp AATTCTGCCCTCACTGCAGATGTGCAGGTCAAACCCAAAGTGGTCAATGGGAAAGAGCCATCTGGGGGATaGCAAAGACTTGCCCTAACC +
Preference number: 2 (lower is better)
Translates to: NSALTADVQVKPKVVNGKEPSGG*QRLALT
Trigger: GGTTAGGGCAAGTCTTTGCCATCCCCCAGATGGCTC...TTTCCCATTGACCACTTTGGGTTTGACCTGCACATCTGCAGTGAGGGCAGAATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
3UTR-3UTR CCA 90 bp ACCAGTGAGTTGTGCTTGTTGAATTCTGCCCTCACTGCAGATGTGCAGGTCAAATTTGGTGCAGGGCTCTaGAATGTCCAGAAGGAGCGG +
Preference number: 2 (lower is better)
Translates to: TSELCLLNSALTADVQVKFGAGL*NVQKER
Trigger: CCGCTCCTTCTGGACATTCCAGAGCCCTGCACCAAA...TTTGACCTGCACATCTGCAGTGAGGGCAGAATTCAACAAGCACAACTCACTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
3UTR-3UTR CCA 90 bp AGGGTTTGCCGATGTGCTCGTGTCTGTGAAGGGGTTGCTTCCGGTCATCTCCTTTCTTCTCAGTCGACATaGAGAATAGAGGAGAGCAGA +
Preference number: 2 (lower is better)
Translates to: RVCRCARVCEGVASGHLLSSQST*RIEESR
Trigger: TCTGCTCTCCTCTATTCTCCATGTCGACTGAGAAGA...AAGGAGATGACCGGAAGCAACCCCTTCACAGACACGAGCACATCGGCAAACCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR CAA 90 bp AACCAGAAACGGGCCCCTGTTCATACGGATAGGGGTTCTGGACTGTaGACTCTAGCCCTGGTCTTAATTCACTGGCAATTTCATAGCCTC +
Preference number: 2 (lower is better)
Translates to: NQKRAPVHTDRGSGL*TLALVLIHWQFHSL
Trigger: GAGGCTATGAAATTGCCAGTGAATTAAGACCAGGGCTAGAGTCAACAGTCCAGAACCCCTATCCGTATGAACAGGGGCCCGTTTCTGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR-3UTR TCA 90 bp AAAATCTTGTTGCTGTCTACCTTCCATCCAACAGGTAAATGCCTCACGACGGTGTTCTGGGTGCGGCTGTaGGCTGAATGGCACCTTCTA +
Preference number: 2 (lower is better)
Translates to: KILLLSTFHPTGKCLTTVFWVRL*AEWHLL
Trigger: TAGAAGGTGCCATTCAGCTCACAGCCGCACCCAGAA...CACCGTCGTGAGGCATTTACCTGTTGGATGGAAGGTAGACAGCAACAAGATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR-3UTR GCA 90 bp AGGGTTTGCCGATGTGCTCGTGTCTGTGAAGGGGTTGCTTCCGGTCATCTCCTTGACCTACACAAGGAATaGATCTTGAGCCTTCTGTTT +
Preference number: 2 (lower is better)
Translates to: RVCRCARVCEGVASGHLLDLHKE*ILSLLF
Trigger: AAACAGAAGGCTCAAGATGCATTCCTTGTGTAGGTC...AAGGAGATGACCGGAAGCAACCCCTTCACAGACACGAGCACATCGGCAAACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR-3UTR CCA 90 bp ACCAGTGAGTTGTGCTTGTTGAATTCTGCCCTCACTGCAGATGTGCAGGTCAAATCTGATCCTGACACCTaGCTTAGAGACAGAGCCCTC +
Preference number: 2 (lower is better)
Translates to: TSELCLLNSALTADVQVKSDPDT*LRDRAL
Trigger: GAGGGCTCTGTCTCTAAGCCAGGTGTCAGGATCAGA...TTTGACCTGCACATCTGCAGTGAGGGCAGAATTCAACAAGCACAACTCACTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
3UTR-3UTR CCA 90 bp AATTCTGCCCTCACTGCAGATGTGCAGGTCAAACCCAAAGTGGTCAATGGGAAAGGCGACAACCTAGTGTaGCCACAAGAGAGTCTGCTA +
Preference number: 2 (lower is better)
Translates to: NSALTADVQVKPKVVNGKGDNLV*PQESLL
Trigger: TAGCAGACTCTCTTGTGGCCACACTAGGTTGTCGCC...TTTCCCATTGACCACTTTGGGTTTGACCTGCACATCTGCAGTGAGGGCAGAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
3UTR-3UTR CCA 90 bp GTTGAATTCTGCCCTCACTGCAGATGTGCAGGTCAAACCCAAAGTGGTCAATGGCACCAAGTAAGGGTTTaGTGCAGGGCTCTGGAATGT +
Preference number: 2 (lower is better)
Translates to: VEFCPHCRCAGQTQSGQWHQVRV*CRALEC
Trigger: ACATTCCAGAGCCCTGCACCAAACCCTTACTTGGTG...CCATTGACCACTTTGGGTTTGACCTGCACATCTGCAGTGAGGGCAGAATTCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
3UTR-3UTR CCA 90 bp TCCAGAAATGTCTCTGGTTCGCATAGAGAGGTACCCAACTGGTCTCGGGACTCAAAGGAAGCAGCAAGCTaGAAGTGGTCGTGCAAACAA +
Preference number: 2 (lower is better)
Translates to: SRNVSGSHREVPNWSRDSKEAAS*KWSCKQ
Trigger: TTGTTTGCACGACCACTTCCAGCTTGCTGCTTCCTT...TGAGTCCCGAGACCAGTTGGGTACCTCTCTATGCGAACCAGAGACATTTCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR-3UTR CCA 90 bp AATTCTGCCCTCACTGCAGATGTGCAGGTCAAACCCAAAGTGGTCAATGGGAAAAGGAGACTTTACAGATaGCGCCTGATCTCATGGGAC +
Preference number: 2 (lower is better)
Translates to: NSALTADVQVKPKVVNGKRRLYR*RLISWD
Trigger: GTCCCATGAGATCAGGCGCCATCTGTAAAGTCTCCT...TTTCCCATTGACCACTTTGGGTTTGACCTGCACATCTGCAGTGAGGGCAGAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
3UTR-3UTR CCA 90 bp ACCCCACTTAACATTAGAAGTGCTCTCTCCGACCTACACAAGGAATGCATCTTGGAAGACAGAGCCATCTaGGGGATGGCAAAGACTTGC +
Preference number: 2 (lower is better)
Translates to: TPLNIRSALSDLHKECILEDRAI*GMAKTC
Trigger: GCAAGTCTTTGCCATCCCCCAGATGGCTCTGTCTTC...CAAGATGCATTCCTTGTGTAGGTCGGAGAGAGCACTTCTAATGTTAAGTGGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR-3UTR TCA 90 bp GGATCCAGAAATGTCTCTGGTTCGCATAGAGAGGTACCCAACTGGTCTCGGGACACAAGGAATGCATCTTaGGCCTTCTGTTTAAACACT +
Preference number: 2 (lower is better)
Translates to: GSRNVSGSHREVPNWSRDTRNAS*AFCLNT
Trigger: AGTGTTTAAACAGAAGGCTCAAGATGCATTCCTTGT...GTCCCGAGACCAGTTGGGTACCTCTCTATGCGAACCAGAGACATTTCTGGATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR-3UTR GCA 90 bp GCCAAGGTCGCTGATGTCCTTCGAATGTTATGGCTTGTATTTCCAAAAGGGACTGAATTCTGCCCTCACTaGAGATGTGCAGGTCAAACC +
Preference number: 2 (lower is better)
Translates to: AKVADVLRMLWLVFPKGTEFCPH*RCAGQT
Trigger: GGTTTGACCTGCACATCTGCAGTGAGGGCAGAATTC...AGTCCCTTTTGGAAATACAAGCCATAACATTCGAAGGACATCAGCGACCTTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR-3UTR CCA 90 bp ACCCCACTTAACATTAGAAGTGCTCTCTCCGACCTACACAAGGAATGCATCTTGGCCTCTGAGACGAGCTaGTTTGTTTCCATCCCTGAA +
Preference number: 2 (lower is better)
Translates to: TPLNIRSALSDLHKECILASETS*FVSIPE
Trigger: TTCAGGGATGGAAACAAACCAGCTCGTCTCAGAGGC...CAAGATGCATTCCTTGTGTAGGTCGGAGAGAGCACTTCTAATGTTAAGTGGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR-3UTR CCA 90 bp AAAATCTTGTTGCTGTCTACCTTCCATCCAACAGGTAAATGCCTCACGACGGTGCAGATCTGGACAGAGTaGTTCTCCATCCCATGGACA +
Preference number: 2 (lower is better)
Translates to: KILLLSTFHPTGKCLTTVQIWTE*FSIPWT
Trigger: TGTCCATGGGATGGAGAACCACTCTGTCCAGATCTG...CACCGTCGTGAGGCATTTACCTGTTGGATGGAAGGTAGACAGCAACAAGATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR CAA 90 bp GGTTTGTTTCCATCCCTGAAGCCTTTGGACGAGCTGGATGAGGTCTaGATAACTGAGAACTTTGGAAAGCTTCCTCTAATGAGACTGGGA +
Preference number: 2 (lower is better)
Translates to: GLFPSLKPLDELDEV*ITENFGKLPLMRLG
Trigger: TCCCAGTCTCATTAGAGGAAGCTTTCCAAAGTTCTCAGTTATCAAGACCTCATCCAGCTCGTCCAAAGGCTTCAGGGATGGAAACAAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
3UTR CAA 90 bp TTTTGCCCTCTGTCTGATTCTCGCTCTAACCTGCTGCAATGGGAATaGCTTCTTCACCTCCAGGAAAGCCTCAACAAAAATACTCCTGAG +
Preference number: 2 (lower is better)
Translates to: FCPLSDSRSNLLQWE*LLHLQESLNKNTPE
Trigger: CTCAGGAGTATTTTTGTTGAGGCTTTCCTGGAGGTGAAGAAGCAATTCCCATTGCAGCAGGTTAGAGCGAGAATCAGACAGAGGGCAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR-3UTR GCA 90 bp ACCCCACTTAACATTAGAAGTGCTCTCTCCGACCTACACAAGGAATGCATCTTGCACAAACAGATCTTGTaGATCAGTCTCCTGGGTGGA +
Preference number: 2 (lower is better)
Translates to: TPLNIRSALSDLHKECILHKQIL*ISLLGG
Trigger: TCCACCCAGGAGACTGATGCACAAGATCTGTTTGTG...CAAGATGCATTCCTTGTGTAGGTCGGAGAGAGCACTTCTAATGTTAAGTGGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR-3UTR CCA 90 bp TCCAGAAATGTCTCTGGTTCGCATAGAGAGGTACCCAACTGGTCTCGGGACTCAGTCCTTCGAATGTTATaGCTTGTATTTCCAAAAGGG +
Preference number: 2 (lower is better)
Translates to: SRNVSGSHREVPNWSRDSVLRML*LVFPKG
Trigger: CCCTTTTGGAAATACAAGCCATAACATTCGAAGGAC...TGAGTCCCGAGACCAGTTGGGTACCTCTCTATGCGAACCAGAGACATTTCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR CAA 90 bp CACCTAAACAAGCCAAGGTCGCTGATGTCCTTCGAATGTTATGGCTaGTATTTCCAAAAGGGACTTTGGCTCAGCCCAGATTTTTCTGCA +
Preference number: 2 (lower is better)
Translates to: HLNKPRSLMSFECYG*YFQKGLWLSPDFSA
Trigger: TGCAGAAAAATCTGGGCTGAGCCAAAGTCCCTTTTGGAAATACAAGCCATAACATTCGAAGGACATCAGCGACCTTGGCTTGTTTAGGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR-3UTR TCA 90 bp GCCAAGGTCGCTGATGTCCTTCGAATGTTATGGCTTGTATTTCCAAAAGGGACTGGTCTGGTGACCAGGTaGTTAAAATCTTGTTGCTGT +
Preference number: 2 (lower is better)
Translates to: AKVADVLRMLWLVFPKGTGLVTR*LKSCCC
Trigger: ACAGCAACAAGATTTTAATCACCTGGTCACCAGACC...AGTCCCTTTTGGAAATACAAGCCATAACATTCGAAGGACATCAGCGACCTTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR-3UTR CCA 90 bp AATTCTGCCCTCACTGCAGATGTGCAGGTCAAACCCAAAGTGGTCAATGGGAAATTTAGACTGACATGGTaGAGAATGTGTTTGCTGTGG +
Preference number: 2 (lower is better)
Translates to: NSALTADVQVKPKVVNGKFRLTW*RMCLLW
Trigger: CCACAGCAAACACATTCTCCACCATGTCAGTCTAAA...TTTCCCATTGACCACTTTGGGTTTGACCTGCACATCTGCAGTGAGGGCAGAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
3UTR CAA 90 bp CTTAACATTAGAAGTGCTCTCTCCGACCTACACAAGGAATGCATCTaGAGCCTTCTGTTTAAACACTCCTTGTCAAGACTACCTGCAGCT +
Preference number: 2 (lower is better)
Translates to: LNIRSALSDLHKECI*SLLFKHSLSRLPAA
Trigger: AGCTGCAGGTAGTCTTGACAAGGAGTGTTTAAACAGAAGGCTCAAGATGCATTCCTTGTGTAGGTCGGAGAGAGCACTTCTAATGTTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR CCA 72 bp TGCACAGGGCACCGTGGCGGACAGGCCCCAGCTTGCTaGCCTCTGAGACGAGCTGGTTTGTTTCCATCCCTG +
Preference number: 3 (lower is better)
Translates to: CTGHRGGQAPAC*PLRRAGLFPSL
Trigger: CAGGGATGGAAACAAACCAGCTCGTCTCAGAGGCCAGCAAGCTGGGGCCTGTCCGCCACGGTGCCCTGTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
3UTR-3UTR CAA 90 bp TGTCCAGAAGGAGCGGGAAGCAAAGGTGGCGGGACACTGCCTGAAAGGCGACAACGGACAGGCCCCAGCTaGCTGGCCTCTGAGACGAGC +
Preference number: 3 (lower is better)
Translates to: CPEGAGSKGGGTLPERRQRTGPS*LASETS
Trigger: GCTCGTCTCAGAGGCCAGCAAGCTGGGGCCTGTCCG...TTGTCGCCTTTCAGGCAGTGTCCCGCCACCTTTGCTTCCCGCTCCTTCTGGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
3UTR TCA 72 bp ACCATCCAGTGGGGTGCAGGTACAGGCCAGGCTGTGTaGTCACCAGCTAGGCAAGGCTCCAGCTGCGACAAG +
Preference number: 3 (lower is better)
Translates to: TIQWGAGTGQAV*SPARQGSSCDK
Trigger: CTTGTCGCAGCTGGAGCCTTGCCTAGCTGGTGATCACACAGCCTGGCCTGTACCTGCACCCCACTGGATGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR TCA 72 bp TCCCACCGCAGAAATTCTCCTTGGCCAACAGGGTGCTaGGTGGAGGTAGAAAGGAGGCCCAGGGTGGTCCCA +
Preference number: 3 (lower is better)
Translates to: SHRRNSPWPTGC*VEVERRPRVVP
Trigger: TGGGACCACCCTGGGCCTCCTTTCTACCTCCACTCAGCACCCTGTTGGCCAAGGAGAATTTCTGCGGTGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR TCA 72 bp GGTGATGCTGGAAGGGAAGCGCCCCCACTTGACAGATaGGTGCACGGAGGTCCCGACAGGGGATGTGACTTA +
Preference number: 3 (lower is better)
Translates to: GDAGREAPPLDR*VHGGPDRGCDL
Trigger: TAAGTCACATCCCCTGTCGGGACCTCCGTGCACTCATCTGTCAAGTGGGGGCGCTTCCCTTCCAGCATCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR GCA 72 bp GTCCAGAAGGAGCGGGAAGCAAAGGTGGCGGGACACTaGCTGAAAGGCGACAACCTAGTGTGGCCACAAGAG +
Preference number: 3 (lower is better)
Translates to: VQKEREAKVAGH*LKGDNLVWPQE
Trigger: CTCTTGTGGCCACACTAGGTTGTCGCCTTTCAGGCAGTGTCCCGCCACCTTTGCTTCCCGCTCCTTCTGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
3UTR GCA 72 bp GATGGATTTCCAGGGCATGGGCTCCCGACTAGAATCTaGCCCTCGCTCATGCTTCTCCCGGCCCCTTTAGAC +
Preference number: 3 (lower is better)
Translates to: DGFPGHGLPTRI*PSLMLLPAPLD
Trigger: GTCTAAAGGGGCCGGGAGAAGCATGAGCGAGGGGCAGATTCTAGTCGGGAGCCCATGCCCTGGAAATCCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
3UTR CCA 72 bp CGCCAAAAGGCGAGTGTGAGCCCTAAGAACAGCTTGTaGGCACAGCTGGCATTTGGAGGAGGAGCCTGGGGA +
Preference number: 3 (lower is better)
Translates to: RQKASVSPKNSL*AQLAFGGGAWG
Trigger: TCCCCAGGCTCCTCCTCCAAATGCCAGCTGTGCCCACAAGCTGTTCTTAGGGCTCACACTCGCCTTTTGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR-3UTR CAA 90 bp CATCTCACATGTAGGACTGACCCGGCCCCATTAAGAGCCTGTGGTGGGCGGCCCAGTTCCAGCCTCTGTTaGTTTCAGAGCGGCAAGCAC +
Preference number: 3 (lower is better)
Translates to: HLTCRTDPAPLRACGGRPSSSLC*FQSGKH
Trigger: GTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACT...GGGCCGCCCACCACAGGCTCTTAATGGGGCCGGGTCAGTCCTACATGTGAGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
3UTR-3UTR CAA 90 bp GGATCCAGAAATGTCTCTGGTTCGCATAGAGAGGTACCCAACTGGTCTCGGGACGCTGGAGGAAGAGCCTaGGGGCTTCCAGGGCACAAG +
Preference number: 3 (lower is better)
Translates to: GSRNVSGSHREVPNWSRDAGGRA*GLPGHK
Trigger: CTTGTGCCCTGGAAGCCCCAAGGCTCTTCCTCCAGC...GTCCCGAGACCAGTTGGGTACCTCTCTATGCGAACCAGAGACATTTCTGGATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR-3UTR CAA 90 bp GTGGAGGAAACACATTCATACCGGGGTGAGGAGTGCTGGCGGGAGACACGGCTCCAAGGGGCCTATGTGTaGCCACTGACTGAAAGCACT +
Preference number: 3 (lower is better)
Translates to: VEETHSYRGEECWRETRLQGAYV*PLTEST
Trigger: AGTGCTTTCAGTCAGTGGCAACACATAGGCCCCTTG...GAGCCGTGTCTCCCGCCAGCACTCCTCACCCCGGTATGAATGTGTTTCCTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR CCA 72 bp ATGGACTGGCCCAAACTGGGCCAACCTGAGCTACCCTaGAAGACGCAAGAGGGCTCACTCTATCCCAGGGAT +
Preference number: 3 (lower is better)
Translates to: MDWPKLGQPELP*KTQEGSLYPRD
Trigger: ATCCCTGGGATAGAGTGAGCCCTCTTGCGTCTTCCAGGGTAGCTCAGGTTGGCCCAGTTTGGGCCAGTCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR CCA 72 bp CCCGGGGGCTCAGGCTTCCTGGCCCTAATCTTCACCTaGCCTGGATCCAGAAATGTCTCTGGTTCGCATAGA +
Preference number: 3 (lower is better)
Translates to: PGGSGFLALIFT*PGSRNVSGSHR
Trigger: TCTATGCGAACCAGAGACATTTCTGGATCCAGGCCAGGTGAAGATTAGGGCCAGGAAGCCTGAGCCCCCGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR-3UTR CAA 90 bp AGTAAGGGTTTGGTGCAGGGCTCTGGAATGTCCAGAAGGAGCGGGAAGCAAAGGCCATCCCTGAAGCCTTaGGACGAGCTGGATGAGGTC +
Preference number: 3 (lower is better)
Translates to: SKGLVQGSGMSRRSGKQRPSLKP*DELDEV
Trigger: GACCTCATCCAGCTCGTCCAAAGGCTTCAGGGATGG...CCTTTGCTTCCCGCTCCTTCTGGACATTCCAGAGCCCTGCACCAAACCCTTACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
3UTR GCA 72 bp GGAGCAGATCTGCTGGCTGAGATGCAAGCTTCAGGTTaGAGCAGACGTGAGCAGCAATTGAGCACCCATCCG +
Preference number: 3 (lower is better)
Translates to: GADLLAEMQASG*SRREQQLSTHP
Trigger: CGGATGGGTGCTCAATTGCTGCTCACGTCTGCTGCAACCTGAAGCTTGCATCTCAGCCAGCAGATCTGCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR GCA 72 bp CTGGGTCCCAGAAGGGAGCAGATCTGCTGGCTGAGATaGAAGCTTCAGGTTGCAGCAGACGTGAGCAGCAAT +
Preference number: 3 (lower is better)
Translates to: LGPRREQICWLR*KLQVAADVSSN
Trigger: ATTGCTGCTCACGTCTGCTGCAACCTGAAGCTTGCATCTCAGCCAGCAGATCTGCTCCCTTCTGGGACCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR CCA 72 bp GCTGGTGTCATGACCCAACCCCAGATCTGGACAGAGTaGTTCTCCATCCCATGGACAGATCCTACCAGGAGG +
Preference number: 3 (lower is better)
Translates to: AGVMTQPQIWTE*FSIPWTDPTRR
Trigger: CCTCCTGGTAGGATCTGTCCATGGGATGGAGAACCACTCTGTCCAGATCTGGGGTTGGGTCATGACACCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
3UTR CCA 72 bp TTAGTGGAGTGTTTACCTCAGGGGTCACACTCAGCCTaGTCTGGCCTTAACTGGGTGTGGTCCTGTCCCTGC +
Preference number: 3 (lower is better)
Translates to: LVECLPQGSHSA*SGLNWVWSCPC
Trigger: GCAGGGACAGGACCACACCCAGTTAAGGCCAGACCAGGCTGAGTGTGACCCCTGAGGTAAACACTCCACTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR-3UTR CAA 90 bp GTGGAGGAAACACATTCATACCGGGGTGAGGAGTGCTGGCGGGAGACACGGCTCTGGTTGGTGAATTCGTaGGTACACTGTTTCGGTGTG +
Preference number: 3 (lower is better)
Translates to: VEETHSYRGEECWRETRLWLVNS*VHCFGV
Trigger: CACACCGAAACAGTGTACCAACGAATTCACCAACCA...GAGCCGTGTCTCCCGCCAGCACTCCTCACCCCGGTATGAATGTGTTTCCTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR TCA 72 bp ACCTCCAAAAATGGACTGGCCCAAACTGGGCCAACCTaGGCTACCCTGGAAGACGCAAGAGGGCTCACTCTA +
Preference number: 3 (lower is better)
Translates to: TSKNGLAQTGPT*ATLEDARGLTL
Trigger: TAGAGTGAGCCCTCTTGCGTCTTCCAGGGTAGCTCAGGTTGGCCCAGTTTGGGCCAGTCCATTTTTGGAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR TCA 72 bp ACTACCAAAAACCCACCACGCGCCAAAAGGCGAGTGTaGGCCCTAAGAACAGCTTGTGGGCACAGCTGGCAT +
Preference number: 3 (lower is better)
Translates to: TTKNPPRAKRRV*ALRTACGHSWH
Trigger: ATGCCAGCTGTGCCCACAAGCTGTTCTTAGGGCTCACACTCGCCTTTTGGCGCGTGGTGGGTTTTTGGTAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR CCA 72 bp TCCCAGCCCTGCCATACACAAGAAGACAGAGCCATCTaGGGGATGGCAAAGACTTGCCCTAACCCATCTCAC +
Preference number: 3 (lower is better)
Translates to: SQPCHTQEDRAI*GMAKTCPNPSH
Trigger: GTGAGATGGGTTAGGGCAAGTCTTTGCCATCCCCCAGATGGCTCTGTCTTCTTGTGTATGGCAGGGCTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
3UTR CCA 72 bp CCAGCTGCGACAAGGACTCCATCTTCACGCCTGTCCTaGCTCCTGGGGAGTAGACTCCAGAACATACTATCA +
Preference number: 3 (lower is better)
Translates to: PAATRTPSSRLS*LLGSRLQNILS
Trigger: TGATAGTATGTTCTGGAGTCTACTCCCCAGGAGCCAGGACAGGCGTGAAGATGGAGTCCTTGTCGCAGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR-3UTR CAA 90 bp AGTAAGGGTTTGGTGCAGGGCTCTGGAATGTCCAGAAGGAGCGGGAAGCAAAGGAGTTCCAGCCTCTGTTaGTTTCAGAGCGGCAAGCAC +
Preference number: 3 (lower is better)
Translates to: SKGLVQGSGMSRRSGKQRSSSLC*FQSGKH
Trigger: GTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACT...CCTTTGCTTCCCGCTCCTTCTGGACATTCCAGAGCCCTGCACCAAACCCTTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
3UTR TCA 72 bp TTTGGGGCTAATTTGCCGAATGAGGTAGTTCCATCCTaGCCTCTCCAGGCATGGTGGGTCTGGGAAGACAGG +
Preference number: 3 (lower is better)
Translates to: FGANLPNEVVPS*PLQAWWVWEDR
Trigger: CCTGTCTTCCCAGACCCACCATGCCTGGAGAGGTCAGGATGGAACTACCTCATTCGGCAAATTAGCCCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
3UTR TCA 72 bp GAGAAAGGGAGGAGGTACATGCAGTTGCCGGTGGCCTaGGACACTCATCTAGAACAAACACCCTCAGCTTGC +
Preference number: 3 (lower is better)
Translates to: EKGRRYMQLPVA*DTHLEQTPSAC
Trigger: GCAAGCTGAGGGTGTTTGTTCTAGATGAGTGTCTCAGGCCACCGGCAACTGCATGTACCTCCTCCCTTTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR TCA 72 bp AGAGGTACCCAACTGGTCTCGGGACTCACCTTTCACTaGGCAGGGGGCATGAACAAGACACAGCTTAGTGGA +
Preference number: 3 (lower is better)
Translates to: RGTQLVSGLTFH*AGGMNKTQLSG
Trigger: TCCACTAAGCTGTGTCTTGTTCATGCCCCCTGCTCAGTGAAAGGTGAGTCCCGAGACCAGTTGGGTACCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR GCA 72 bp GACAGAAAACTGTACAAGGGACAGCAGTCCCAGCCCTaGCATACACAAGAAGACAGAGCCATCTGGGGGATG +
Preference number: 3 (lower is better)
Translates to: DRKLYKGQQSQP*HTQEDRAIWGM
Trigger: CATCCCCCAGATGGCTCTGTCTTCTTGTGTATGGCAGGGCTGGGACTGCTGTCCCTTGTACAGTTTTCTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
3UTR GCA 72 bp GGGGAACTGAAGGAAGCAGCAAGCTGGAAGTGGTCGTaGAAACAAGTTGAAGACCCTGGGCCAAGAACTTCC +
Preference number: 3 (lower is better)
Translates to: GELKEAASWKWS*KQVEDPGPRTS
Trigger: GGAAGTTCTTGGCCCAGGGTCTTCAACTTGTTTGCACGACCACTTCCAGCTTGCTGCTTCCTTCAGTTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR CCA 72 bp ATGGCACCTTCTACCCATGATTCTGATCCTGACACCTaGCTTAGAGACAGAGCCCTCCCTACCCTGATCCTC +
Preference number: 3 (lower is better)
Translates to: MAPSTHDSDPDT*LRDRALPTLIL
Trigger: GAGGATCAGGGTAGGGAGGGCTCTGTCTCTAAGCCAGGTGTCAGGATCAGAATCATGGGTAGAAGGTGCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
3UTR CCA 72 bp AGAAATGTCTCTGGTTCGCATAGAGAGGTACCCAACTaGTCTCGGGACTCACCTTTCACTGAGCAGGGGGCA +
Preference number: 3 (lower is better)
Translates to: RNVSGSHREVPN*SRDSPFTEQGA
Trigger: TGCCCCCTGCTCAGTGAAAGGTGAGTCCCGAGACCAGTTGGGTACCTCTCTATGCGAACCAGAGACATTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR TCA 72 bp TGGTCTCGGGACTCACCTTTCACTGAGCAGGGGGCATaGACAAGACACAGCTTAGTGGAGTGTTTACCTCAG +
Preference number: 3 (lower is better)
Translates to: WSRDSPFTEQGA*TRHSLVECLPQ
Trigger: CTGAGGTAAACACTCCACTAAGCTGTGTCTTGTTCATGCCCCCTGCTCAGTGAAAGGTGAGTCCCGAGACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR-3UTR CAA 90 bp AAGGTGGCGGGACACTGCCTGAAAGGCGACAACCTAGTGTGGCCACAAGAGAGTCAATTTGGGGCTAATTaGCCGAATGAGGTAGTTCCA +
Preference number: 3 (lower is better)
Translates to: KVAGHCLKGDNLVWPQESQFGAN*PNEVVP
Trigger: TGGAACTACCTCATTCGGCAAATTAGCCCCAAATTG...ACTCTCTTGTGGCCACACTAGGTTGTCGCCTTTCAGGCAGTGTCCCGCCACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
3UTR-3UTR CAA 90 bp TCCAGAAATGTCTCTGGTTCGCATAGAGAGGTACCCAACTGGTCTCGGGACTCAAGGGGTTCTGGACTGTaGACTCTAGCCCTGGTCTTA +
Preference number: 3 (lower is better)
Translates to: SRNVSGSHREVPNWSRDSRGSGL*TLALVL
Trigger: TAAGACCAGGGCTAGAGTCAACAGTCCAGAACCCCT...TGAGTCCCGAGACCAGTTGGGTACCTCTCTATGCGAACCAGAGACATTTCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR-3UTR CAA 90 bp GGATCCAGAAATGTCTCTGGTTCGCATAGAGAGGTACCCAACTGGTCTCGGGACTCGGTTTCTAGCACGTaGACTGAAAGACCAGTGAGT +
Preference number: 3 (lower is better)
Translates to: GSRNVSGSHREVPNWSRDSVSST*TERPVS
Trigger: ACTCACTGGTCTTTCAGTCAACGTGCTAGAAACCGA...GTCCCGAGACCAGTTGGGTACCTCTCTATGCGAACCAGAGACATTTCTGGATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR TCA 72 bp CTGGAAGACGCAAGAGGGCTCACTCTATCCCAGGGATaGACAGAGGACTCTGGAATCCTCAGATGTAATGGA +
Preference number: 3 (lower is better)
Translates to: LEDARGLTLSQG*TEDSGILRCNG
Trigger: TCCATTACATCTGAGGATTCCAGAGTCCTCTGTTCATCCCTGGGATAGAGTGAGCCCTCTTGCGTCTTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR TCA 72 bp GTAAGACCCCTGAAAACGAGCGATCACGGGCTTCCCTaGCGACAGGGCCATTATAGTGTCCTCAGATTAGAT +
Preference number: 3 (lower is better)
Translates to: VRPLKTSDHGLP*RQGHYSVLRLD
Trigger: ATCTAATCTGAGGACACTATAATGGCCCTGTCGTCAGGGAAGCCCGTGATCGCTCGTTTTCAGGGGTCTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR TCA 72 bp TTCTGTAGAGTGCCTATGTATCAATGCCAAGGTTGCTaGCCGGTAAGACCCCTGAAAACGAGCGATCACGGG +
Preference number: 3 (lower is better)
Translates to: FCRVPMYQCQGC*PVRPLKTSDHG
Trigger: CCCGTGATCGCTCGTTTTCAGGGGTCTTACCGGTCAGCAACCTTGGCATTGATACATAGGCACTCTACAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR TCA 72 bp CCATCCCCACGGTCCAAGGGGCCTATGTGTTGCCACTaGCTGAAAGCACTAGAAAGAATAGAGGGTAACAAG +
Preference number: 3 (lower is better)
Translates to: PSPRSKGPMCCH*LKALERIEGNK
Trigger: CTTGTTACCCTCTATTCTTTCTAGTGCTTTCAGTCAGTGGCAACACATAGGCCCCTTGGACCGTGGGGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR GCA 72 bp ACGGCATCTCTCTCACCAGGACTTGAGGCAATTCTATaGACGATTGTGCAGATGAGAGCCAGACACAGCATG +
Preference number: 3 (lower is better)
Translates to: TASLSPGLEAIL*TIVQMRARHSM
Trigger: CATGCTGTGTCTGGCTCTCATCTGCACAATCGTGCATAGAATTGCCTCAAGTCCTGGTGAGAGAGATGCCGT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR GCA 72 bp GAGAGAGCACCCACGTGCCCTGACCTTACATTCCACTaGAATCCCACTAAAGTTTCCCTCAAACACCAAGGA +
Preference number: 3 (lower is better)
Translates to: ERAPTCPDLTFH*NPTKVSLKHQG
Trigger: TCCTTGGTGTTTGAGGGAAACTTTAGTGGGATTGCAGTGGAATGTAAGGTCAGGGCACGTGGGTGCTCTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR CCA 72 bp AGGATGGATTGGCATTTCCAGAGGAGACTTTACAGATaGCGCCTGATCTCATGGGACACGATTCAGCGCTCA +
Preference number: 3 (lower is better)
Translates to: RMDWHFQRRLYR*RLISWDTIQRS
Trigger: TGAGCGCTGAATCGTGTCCCATGAGATCAGGCGCCATCTGTAAAGTCTCCTCTGGAAATGCCAATCCATCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
3UTR-3UTR CAA 90 bp GGATCCAGAAATGTCTCTGGTTCGCATAGAGAGGTACCCAACTGGTCTCGGGACTTTCTGAAATTCGAATaGGATATGGGCCGTGAGGGT +
Preference number: 3 (lower is better)
Translates to: GSRNVSGSHREVPNWSRDFLKFE*DMGREG
Trigger: ACCCTCACGGCCCATATCCAATTCGAATTTCAGAAA...GTCCCGAGACCAGTTGGGTACCTCTCTATGCGAACCAGAGACATTTCTGGATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR-3UTR CAA 90 bp GCCAAGGTCGCTGATGTCCTTCGAATGTTATGGCTTGTATTTCCAAAAGGGACTCCGCAGAAATTCTCCTaGGCCAACAGGGTGCTGAGT +
Preference number: 3 (lower is better)
Translates to: AKVADVLRMLWLVFPKGTPQKFS*ANRVLS
Trigger: ACTCAGCACCCTGTTGGCCAAGGAGAATTTCTGCGG...AGTCCCTTTTGGAAATACAAGCCATAACATTCGAAGGACATCAGCGACCTTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR TCA 72 bp ATTGGCATTTCCAGAGGAGACTTTACAGATGGCGCCTaGTCTCATGGGACACGATTCAGCGCTCAATTTGGG +
Preference number: 3 (lower is better)
Translates to: IGISRGDFTDGA*SHGTRFSAQFG
Trigger: CCCAAATTGAGCGCTGAATCGTGTCCCATGAGATCAGGCGCCATCTGTAAAGTCTCCTCTGGAAATGCCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
3UTR TCA 72 bp GGGACATTCTCAAGAATAGCCCAGACCCGCCCACTTTaGATAAACCCAGCTAAGTCCTCACCTAAGCACCAA +
Preference number: 3 (lower is better)
Translates to: GTFSRIAQTRPL*INPAKSSPKHQ
Trigger: TTGGTGCTTAGGTGAGGACTTAGCTGGGTTTATTCAAAGTGGGCGGGTCTGGGCTATTCTTGAGAATGTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR GCA 72 bp CCATCTTACATACAACTAGAGCGCCGCTTCTCAGCATaGCTGGCTTGTCTTGAGCATTCGCTGAATGAATGC +
Preference number: 3 (lower is better)
Translates to: PSYIQLERRFSA*LACLEHSLNEC
Trigger: GCATTCATTCAGCGAATGCTCAAGACAAGCCAGGCATGCTGAGAAGCGGCGCTCTAGTTGTATGTAAGATGG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR CCA 72 bp CTTTCACAAACAGATCTTGTGCATCAGTCTCCTGGGTaGAGGCAGGTAGAAGGGGCTGACTTGTTCTCAGAA +
Preference number: 3 (lower is better)
Translates to: LSQTDLVHQSPG*RQVEGADLFSE
Trigger: TTCTGAGAACAAGTCAGCCCCTTCTACCTGCCTCCACCCAGGAGACTGATGCACAAGATCTGTTTGTGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR CCA 72 bp GTGGAGGAAACACATTCATACCGGGGTGAGGAGTGCTaGCGGGAGACACGGCTCTTTAACATGAAAAATGTA +
Preference number: 3 (lower is better)
Translates to: VEETHSYRGEEC*RETRLFNMKNV
Trigger: TACATTTTTCATGTTAAAGAGCCGTGTCTCCCGCCAGCACTCCTCACCCCGGTATGAATGTGTTTCCTCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR-3UTR CAA 90 bp AAAATCTTGTTGCTGTCTACCTTCCATCCAACAGGTAAATGCCTCACGACGGTGACACCAAGTAAGGGTTaGGTGCAGGGCTCTGGAATG +
Preference number: 3 (lower is better)
Translates to: KILLLSTFHPTGKCLTTVTPSKG*VQGSGM
Trigger: CATTCCAGAGCCCTGCACCAAACCCTTACTTGGTGT...CACCGTCGTGAGGCATTTACCTGTTGGATGGAAGGTAGACAGCAACAAGATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR-3UTR CAA 90 bp AAAATCTTGTTGCTGTCTACCTTCCATCCAACAGGTAAATGCCTCACGACGGTGGTATCAATGCCAAGGTaGCTGACCGGTAAGACCCCT +
Preference number: 3 (lower is better)
Translates to: KILLLSTFHPTGKCLTTVVSMPR*LTGKTP
Trigger: AGGGGTCTTACCGGTCAGCAACCTTGGCATTGATAC...CACCGTCGTGAGGCATTTACCTGTTGGATGGAAGGTAGACAGCAACAAGATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR TCA 72 bp AGGGAGAAAGTAATGAGCTGGGCCAAACAGCAGCACTaGAAGCTTCCCAAGTCACACTCAGACCAGACTTTT +
Preference number: 3 (lower is better)
Translates to: REKVMSWAKQQH*KLPKSHSDQTF
Trigger: AAAAGTCTGGTCTGAGTGTGACTTGGGAAGCTTTCAGTGCTGCTGTTTGGCCCAGCTCATTACTTTCTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
3UTR TCA 72 bp CTCATGCTTCTCCCGGCCCCTTTAGACTCTTTAGACTaGCATGGTGGAGAATGTGTTTGCTGTGGTAGAGAA +
Preference number: 3 (lower is better)
Translates to: LMLLPAPLDSLD*HGGECVCCGRE
Trigger: TTCTCTACCACAGCAAACACATTCTCCACCATGTCAGTCTAAAGAGTCTAAAGGGGCCGGGAGAAGCATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
3UTR TCA 72 bp AGCACGTTGACTGAAAGACCAGTGAGTTGTGCTTGTTaGATTCTGCCCTCACTGCAGATGTGCAGGTCAAAC +
Preference number: 3 (lower is better)
Translates to: STLTERPVSCAC*ILPSLQMCRSN
Trigger: GTTTGACCTGCACATCTGCAGTGAGGGCAGAATTCAACAAGCACAACTCACTGGTCTTTCAGTCAACGTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
3UTR TCA 72 bp TTTTCACAAAGGGTAGGGAAAGAAACCCCTGGTTGGTaGATTCGTTGGTACACTGTTTCGGTGTGCCCAGCT +
Preference number: 3 (lower is better)
Translates to: FSQRVGKETPGW*IRWYTVSVCPA
Trigger: AGCTGGGCACACCGAAACAGTGTACCAACGAATTCACCAACCAGGGGTTTCTTTCCCTACCCTTTGTGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR TCA 72 bp ATGGAAAAGTACCACGGCATCTCTCTCACCAGGACTTaGGGCAATTCTATGCACGATTGTGCAGATGAGAGC +
Preference number: 3 (lower is better)
Translates to: MEKYHGISLTRT*GNSMHDCADES
Trigger: GCTCTCATCTGCACAATCGTGCATAGAATTGCCTCAAGTCCTGGTGAGAGAGATGCCGTGGTACTTTTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR-3UTR CAA 90 bp GCCAAGGTCGCTGATGTCCTTCGAATGTTATGGCTTGTATTTCCAAAAGGGACTGTAGAAGGGGCTGACTaGTTCTCAGAAATGGAAGGG +
Preference number: 3 (lower is better)
Translates to: AKVADVLRMLWLVFPKGTVEGAD*FSEMEG
Trigger: CCCTTCCATTTCTGAGAACAAGTCAGCCCCTTCTAC...AGTCCCTTTTGGAAATACAAGCCATAACATTCGAAGGACATCAGCGACCTTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR-3UTR CAA 90 bp AATTCTGCCCTCACTGCAGATGTGCAGGTCAAACCCAAAGTGGTCAATGGGAAACAATTTGGGGCTAATTaGCCGAATGAGGTAGTTCCA +
Preference number: 3 (lower is better)
Translates to: NSALTADVQVKPKVVNGKQFGAN*PNEVVP
Trigger: TGGAACTACCTCATTCGGCAAATTAGCCCCAAATTG...TTTCCCATTGACCACTTTGGGTTTGACCTGCACATCTGCAGTGAGGGCAGAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
3UTR TCA 72 bp GAATTGGATATGGGCCGTGAGGGTCTGGTGACCAGGTaGTTAAAATCTTGTTGCTGTCTACCTTCCATCCAA +
Preference number: 3 (lower is better)
Translates to: ELDMGREGLVTR*LKSCCCLPSIQ
Trigger: TTGGATGGAAGGTAGACAGCAACAAGATTTTAATCACCTGGTCACCAGACCCTCACGGCCCATATCCAATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR GCA 72 bp TTGGTTTTTGCCCTCTGTCTGATTCTCGCTCTAACCTaGTGCAATGGGAATTGCTTCTTCACCTCCAGGAAA +
Preference number: 3 (lower is better)
Translates to: LVFALCLILALT*CNGNCFFTSRK
Trigger: TTTCCTGGAGGTGAAGAAGCAATTCCCATTGCAGCAGGTTAGAGCGAGAATCAGACAGAGGGCAAAAACCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR-3UTR CAA 90 bp ACCCCACTTAACATTAGAAGTGCTCTCTCCGACCTACACAAGGAATGCATCTTGTTTCACAAACAGATCTaGTGCATCAGTCTCCTGGGT +
Preference number: 3 (lower is better)
Translates to: TPLNIRSALSDLHKECILFHKQI*CISLLG
Trigger: ACCCAGGAGACTGATGCACAAGATCTGTTTGTGAAA...CAAGATGCATTCCTTGTGTAGGTCGGAGAGAGCACTTCTAATGTTAAGTGGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR TCA 72 bp GAAGTGCTCTCTCCGACCTACACAAGGAATGCATCTTaGGCCTTCTGTTTAAACACTCCTTGTCAAGACTAC +
Preference number: 3 (lower is better)
Translates to: EVLSPTYTRNAS*AFCLNTPCQDY
Trigger: GTAGTCTTGACAAGGAGTGTTTAAACAGAAGGCTCAAGATGCATTCCTTGTGTAGGTCGGAGAGAGCACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR TCA 72 bp AAGGAGAAGGAACAAACCACACGCACACATCATGAATaGCTCAAAAGCATTAAGCTGAGGGAAAGATGCCAG +
Preference number: 3 (lower is better)
Translates to: KEKEQTTRTHHE*LKSIKLRERCQ
Trigger: CTGGCATCTTTCCCTCAGCTTAATGCTTTTGAGTCATTCATGATGTGTGCGTGTGGTTTGTTCCTTCTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR GCA 72 bp TGTCTGATTCTCGCTCTAACCTGCTGCAATGGGAATTaGTTCTTCACCTCCAGGAAAGCCTCAACAAAAATA +
Preference number: 3 (lower is better)
Translates to: CLILALTCCNGN*FFTSRKASTKI
Trigger: TATTTTTGTTGAGGCTTTCCTGGAGGTGAAGAAGCAATTCCCATTGCAGCAGGTTAGAGCGAGAATCAGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR GCA 72 bp GCATGCCTGGCTTGTCTTGAGCATTCGCTGAATGAATaGAGATTAATCAGAACAACAGACTTACCTCTGAAA +
Preference number: 3 (lower is better)
Translates to: ACLACLEHSLNE*RLIRTTDLPLK
Trigger: TTTCAGAGGTAAGTCTGTTGTTCTGATTAATCTGCATTCATTCAGCGAATGCTCAAGACAAGCCAGGCATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR TCA 72 bp AGAGAAATTTCTGAAATTCGAATTGGATATGGGCCGTaGGGGTCTGGTGACCAGGTGATTAAAATCTTGTTG +
Preference number: 3 (lower is better)
Translates to: REISEIRIGYGP*GSGDQVIKILL
Trigger: CAACAAGATTTTAATCACCTGGTCACCAGACCCTCACGGCCCATATCCAATTCGAATTTCAGAAATTTCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR TCA 72 bp AGTAGACTCCAGAACATACTATCAAAGATCGACGAATaGGATCCAAACGGTCATTACTTGCACTGTCTTTGG +
Preference number: 3 (lower is better)
Translates to: SRLQNILSKIDE*DPNGHYLHCLW
Trigger: CCAAAGACAGTGCAAGTAATGACCGTTTGGATCTCATTCGTCGATCTTTGATAGTATGTTCTGGAGTCTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp TCTGGGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCGGCATCCACTCGGCATaGGCCCCATGGTGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: SGPGNMGEPPARLSGSPFGIHSA*APWWEP
Trigger: GGGCTCCCACCATGGGGCCCATGCCGAGTGGATGCC...GAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCCCAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000396115.6
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp GGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAGGCATCCACTCGGCATaGGCCCCATGGTGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: GLGIWGSPQLGCPGHPSGGIHSA*APWWEP
Trigger: GGGCTCCCACCATGGGGCCCATGCCGAGTGGATGCC...TCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000396115.6
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp GGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAGTGCACAGGGCACCGTaGCGGACAGGCCCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: GLGIWGSPQLGCPGHPSGVHRAP*RTGPSL
Trigger: CAAGCTGGGGCCTGTCCGCCACGGTGCCCTGTGCAC...TCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR TCA 90 bp CATCTCACATGTAGGACTGACCCGGCCCCATTAAGAGCCTGTGGTGGGCGGCCCTTCGGCTCCCTACCTTaGGGCCCCGGGGGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: HLTCRTDPAPLRACGGRPFGSLP*GPGGSG
Trigger: GCCTGAGCCCCCGGGGCCTCAAGGTAGGGAGCCGAA...GGGCCGCCCACCACAGGCTCTTAATGGGGCCGGGTCAGTCCTACATGTGAGATG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp TCTGGGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCGCCCAGGAGAGAGGGTaGGGGGCATCCACTCGGCAT +
Preference number: 4 (lower is better)
Translates to: SGPGNMGEPPARLSGSPFAQERG*GASTRH
Trigger: ATGCCGAGTGGATGCCCCCCACCCTCTCTCCTGGGC...GAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCCCAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000396115.6
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp GTGGGTCTGTCTTCTGGGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCGCAGTCTCTGGAGGGTaGGCTGGGGTCCCTGATGCG +
Preference number: 4 (lower is better)
Translates to: VGLSSGPGNMGEPPARLSAVSGG*AGVPDA
Trigger: CGCATCAGGGACCCCAGCGCACCCTCCAGAGACTGC...GGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCCCAGAAGACAGACCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000396115.6
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000585266.5
CDS-3UTR CCA 90 bp GGGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGGCTCTGCCAGCCAGGTaGAAGGATGACCGTCTGGCT +
Preference number: 4 (lower is better)
Translates to: GPGNMGEPPARLSGSPFWALPAR*KDDRLA
Trigger: AGCCAGACGGTCATCCTTCCACCTGGCTGGCAGAGC...CCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000396115.6
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000585266.5
CDS-3UTR CCA 90 bp TCTGGGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCCCGAGGCATAGCGGCTaGCGAGCTGCTTGCGAAGGT +
Preference number: 4 (lower is better)
Translates to: SGPGNMGEPPARLSGSPFPRHSG*RAACEG
Trigger: ACCTTCGCAAGCAGCTCGCCAGCCGCTATGCCTCGG...GAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCCCAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp GGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGACGCAGCTGCGTGTACTaGCACAGGTGCTGCCGGATC +
Preference number: 4 (lower is better)
Translates to: GLGIWGSPQLGCPGHPSGRSCVY*HRCCRI
Trigger: GATCCGGCAGCACCTGTGCCAGTACACGCAGCTGCG...TCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000396115.6
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp GGGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGTCTGTCTTCTGGGCCTaGGAATATGGGGGAGCCCCC +
Preference number: 4 (lower is better)
Translates to: GPGNMGEPPARLSGSPFWSVFWA*EYGGAP
Trigger: GGGGGCTCCCCCATATTCCCAGGCCCAGAAGACAGA...CCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000396115.6
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp GGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGACAGGCCCCAGCTTGCTaGCCTCTGAGACGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: GLGIWGSPQLGCPGHPSGQAPAC*PLRRAG
Trigger: ACCAGCTCGTCTCAGAGGCCAGCAAGCTGGGGCCTG...TCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp TCTGGGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCCGGGGTGAGGAGTGCTaGCGGGAGACACGGCTCTTT +
Preference number: 4 (lower is better)
Translates to: SGPGNMGEPPARLSGSPFRGEEC*RETRLF
Trigger: AAAGAGCCGTGTCTCCCGCCAGCACTCCTCACCCCG...GAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCCCAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp TCTGGGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCGTGCGCTGGGGTCCCTaGTGCGTGGTATCCATTCAC +
Preference number: 4 (lower is better)
Translates to: SGPGNMGEPPARLSGSPFVRWGP*CVVSIH
Trigger: GTGAATGGATACCACGCATCAGGGACCCCAGCGCAC...GAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCCCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000396115.6
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000585266.5
CDS-3UTR GCA 90 bp GGGCTCCCGACTAGAATCTGCCCCTCGCTCATGCTTCTCCCGGCCCCTTTAGACGCAGTCTCTGGAGGGTaGGCTGGGGTCCCTGATGCG +
Preference number: 4 (lower is better)
Translates to: GLPTRICPSLMLLPAPLDAVSGG*AGVPDA
Trigger: CGCATCAGGGACCCCAGCGCACCCTCCAGAGACTGC...GTCTAAAGGGGCCGGGAGAAGCATGAGCGAGGGGCAGATTCTAGTCGGGAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR GCA 90 bp GGGGTGGTGCGGGGGCAGGTGGGTTACAGCCTCCACTGGGATCAGGGTTTCAACCAAACCCAGCCACGGTaGCGTTGCCTTGGGGGTCCT +
Preference number: 4 (lower is better)
Translates to: GVVRGQVGYSLHWDQGFNQTQPR*RCLGGP
Trigger: AGGACCCCCAAGGCAACGGCACCGTGGCTGGGTTTG...GTTGAAACCCTGATCCCAGTGGAGGCTGTAACCCACCTGCCCCCGCACCACCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp GTGGGTCTGTCTTCTGGGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCCAAACCCAGCCACGGTaGCGTTGCCTTGGGGGTCCT +
Preference number: 4 (lower is better)
Translates to: VGLSSGPGNMGEPPARLSQTQPR*RCLGGP
Trigger: AGGACCCCCAAGGCAACGGCACCGTGGCTGGGTTTG...GGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCCCAGAAGACAGACCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp TCTGGGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCGGTCCCGTTTCTGACTaGGGTGCCACCACCAAAGGC +
Preference number: 4 (lower is better)
Translates to: SGPGNMGEPPARLSGSPFGPVSD*GATTKG
Trigger: GCCTTTGGTGGTGGCACCCCAGTCAGAAACGGGACC...GAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCCCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000323816.8
CDS-3UTR CCA 90 bp GGGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGCGTCTCCAGCCTGTGTaGACTTTCTCCGCGCCTTCT +
Preference number: 4 (lower is better)
Translates to: GPGNMGEPPARLSGSPFWRLQPV*TFSAPS
Trigger: AGAAGGCGCGGAGAAAGTCCACACAGGCTGGAGACG...CCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp GTGGAGGAAACACATTCATACCGGGGTGAGGAGTGCTGGCGGGAGACACGGCTCGGCATCCACTCGGCATaGGCCCCATGGTGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: VEETHSYRGEECWRETRLGIHSA*APWWEP
Trigger: GGGCTCCCACCATGGGGCCCATGCCGAGTGGATGCC...GAGCCGTGTCTCCCGCCAGCACTCCTCACCCCGGTATGAATGTGTTTCCTCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp GGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGACAGGCATGGTGGGTCTaGGAAGACAGGAGCCAAGCC +
Preference number: 4 (lower is better)
Translates to: GLGIWGSPQLGCPGHPSGQAWWV*EDRSQA
Trigger: GGCTTGGCTCCTGTCTTCCCAGACCCACCATGCCTG...TCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp GGGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGTGGACTGGCCCAAACTaGGCCAACCTGAGCTACCCT +
Preference number: 4 (lower is better)
Translates to: GPGNMGEPPARLSGSPFWWTGPN*ANLSYP
Trigger: AGGGTAGCTCAGGTTGGCCCAGTTTGGGCCAGTCCA...CCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp TCTGGGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCCATTGGTGGTCGTGTTaGCATAGTACCGCCGGCCCT +
Preference number: 4 (lower is better)
Translates to: SGPGNMGEPPARLSGSPFHWWSC*HSTAGP
Trigger: AGGGCCGGCGGTACTATGTCAACACGACCACCAATG...GAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCCCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000396115.6
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000585266.5
CDS-3UTR TCA 90 bp GAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGAGACAAGGGCCTCTCTGCCGCTCTGTaGGGGCTTTCCGGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: ERQAQHGSQGVFSLRDKGLSAAL*GLSGPS
Trigger: AGAAGGCCCGGAAAGCCCTCACAGAGCGGCAGAGAG...GCCCTTGTCTCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR TCA 90 bp TCTGGGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCCCGTCTTGTGCTCTCTaGCCCACAGCTCCCTGTCTT +
Preference number: 4 (lower is better)
Translates to: SGPGNMGEPPARLSGSPFPSCAL*PTAPCL
Trigger: AAGACAGGGAGCTGTGGGTCAGAGAGCACAAGACGG...GAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCCCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000396115.6
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR TCA 90 bp GGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGAGACAAGGGCAGGGCCCAGGAAGCCCTCCTaGCAGCCATGCCCCAGCATT +
Preference number: 4 (lower is better)
Translates to: GKHSMGVRGSSASETRAGPRKPS*QPCPSI
Trigger: AATGCTGGGGCATGGCTGTCAGGAGGGCTTCCTGGG...CCCTGCCCTTGTCTCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp GTGGGTCTGTCTTCTGGGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCACATTCATACCGGGGTaGGGAGTGCTGGCGGGAGAC +
Preference number: 4 (lower is better)
Translates to: VGLSSGPGNMGEPPARLSTFIPG*GVLAGD
Trigger: GTCTCCCGCCAGCACTCCTCACCCCGGTATGAATGT...GGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCCCAGAAGACAGACCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp AATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAATCACCAGGCAGTCTCTGGAGGGTaGGCTGGGGTCCCTGATGCG +
Preference number: 4 (lower is better)
Translates to: NMGEPPARLSGSPFWNHQAVSGG*AGVPDA
Trigger: CGCATCAGGGACCCCAGCGCACCCTCCAGAGACTGC...CTGGTGATTCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000396115.6
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000579158.5
ENST00000585266.5
CDS-3UTR GCA 90 bp GGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGACAGCCACGGTGCCGTTaGCTTGGGGGTCCTTCTTAT +
Preference number: 4 (lower is better)
Translates to: GLGIWGSPQLGCPGHPSGQPRCR*LGGPSY
Trigger: ATAAGAAGGACCCCCAAGGCAACGGCACCGTGGCTG...TCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp TCTGGGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCCAGCCACGGTGCCGTTaGCTTGGGGGTCCTTCTTAT +
Preference number: 4 (lower is better)
Translates to: SGPGNMGEPPARLSGSPFQPRCR*LGGPSY
Trigger: ATAAGAAGGACCCCCAAGGCAACGGCACCGTGGCTG...GAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCCCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp GGGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGGTGTACTGGCACAGGTaGTGCCGGATCATCTCTACC +
Preference number: 4 (lower is better)
Translates to: GPGNMGEPPARLSGSPFWVYWHR*CRIIST
Trigger: GGTAGAGATGATCCGGCAGCACCTGTGCCAGTACAC...CCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000396115.6
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp GGGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGATGTTGCCCGTCTTGTaGTCTCTGACCCACAGCTCC +
Preference number: 4 (lower is better)
Translates to: GPGNMGEPPARLSGSPFWMLPVL*SLTHSS
Trigger: GGAGCTGTGGGTCAGAGAGCACAAGACGGGCAACAT...CCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000396115.6
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp GGGCTCCCGACTAGAATCTGCCCCTCGCTCATGCTTCTCCCGGCCCCTTTAGACCTGGGTCCACACAGCTaGCTGGAACCCACGACTCCC +
Preference number: 4 (lower is better)
Translates to: GLPTRICPSLMLLPAPLDLGPHS*LEPTTP
Trigger: GGGAGTCGTGGGTTCCAGGCAGCTGTGTGGACCCAG...GTCTAAAGGGGCCGGGAGAAGCATGAGCGAGGGGCAGATTCTAGTCGGGAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp AATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAATCACCAGTACCGGGGTGAGGAGTaGTGGCGGGAGACACGGCTC +
Preference number: 4 (lower is better)
Translates to: NMGEPPARLSGSPFWNHQYRGEE*WRETRL
Trigger: GAGCCGTGTCTCCCGCCAGCACTCCTCACCCCGGTA...CTGGTGATTCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp GGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAGGAAGGATGACCGTCTaGCTTTCTTCTCCCGGCGGA +
Preference number: 4 (lower is better)
Translates to: GLGIWGSPQLGCPGHPSGGRMTV*LSSPGG
Trigger: TCCGCCGGGAGAAGAAAGCCAGACGGTCATCCTTCC...TCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000396115.6
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000585266.5
CDS-3UTR CCA 90 bp GTGGGTCTGTCTTCTGGGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCGCTCTGCCAGCCAGGTaGAAGGATGACCGTCTGGCT +
Preference number: 4 (lower is better)
Translates to: VGLSSGPGNMGEPPARLSALPAR*KDDRLA
Trigger: AGCCAGACGGTCATCCTTCCACCTGGCTGGCAGAGC...GGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCCCAGAAGACAGACCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000396115.6
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000585266.5
CDS-3UTR CCA 90 bp GGGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGTGGGACGTTCCCAGGTaGTCTCATTGGTGGTCGTGT +
Preference number: 4 (lower is better)
Translates to: GPGNMGEPPARLSGSPFWWDVPR*SHWWSC
Trigger: ACACGACCACCAATGAGACCACCTGGGAACGTCCCA...CCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000396115.6
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000585266.5
CDS-3UTR CCA 90 bp TCTGGGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTCCCAGGAGAACTGCTaGGACGTTCCCAGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: SGPGNMGEPPARLSGSPFSQENC*DVPRWS
Trigger: AGACCACCTGGGAACGTCCCAGCAGTTCTCCTGGGA...GAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCCCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000396115.6
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000585266.5
CDS-3UTR CCA 90 bp GGGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGTTTCGGACACTCATGTaGGCAGTCTCTGGAGGGTGC +
Preference number: 4 (lower is better)
Translates to: GPGNMGEPPARLSGSPFWFRTLM*AVSGGC
Trigger: GCACCCTCCAGAGACTGCCCACATGAGTGTCCGAAA...CCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000396115.6
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000585266.5
CDS-3UTR CCA 90 bp CATCTCACATGTAGGACTGACCCGGCCCCATTAAGAGCCTGTGGTGGGCGGCCCCCGAGGCATAGCGGCTaGCGAGCTGCTTGCGAAGGT +
Preference number: 4 (lower is better)
Translates to: HLTCRTDPAPLRACGGRPPRHSG*RAACEG
Trigger: ACCTTCGCAAGCAGCTCGCCAGCCGCTATGCCTCGG...GGGCCGCCCACCACAGGCTCTTAATGGGGCCGGGTCAGTCCTACATGTGAGATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp AATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAATCACCAGCTGGGCCTGGGAATATaGGGGAGCCCCCAGCTAGGC +
Preference number: 4 (lower is better)
Translates to: NMGEPPARLSGSPFWNHQLGLGI*GSPQLG
Trigger: GCCTAGCTGGGGGCTCCCCCATATTCCCAGGCCCAG...CTGGTGATTCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000396115.6
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp GTGGGTCTGTCTTCTGGGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCTCTGTCTTCTGGGCCTaGGAATATGGGGGAGCCCCC +
Preference number: 4 (lower is better)
Translates to: VGLSSGPGNMGEPPARLSSVFWA*EYGGAP
Trigger: GGGGGCTCCCCCATATTCCCAGGCCCAGAAGACAGA...GGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCCCAGAAGACAGACCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000396115.6
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp GTGGGTCTGTCTTCTGGGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCGCGGCAAGCACAGCATaGGAGTCAGGGGGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: VGLSSGPGNMGEPPARLSAASTA*ESGGLQ
Trigger: CTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGC...GGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCCCAGAAGACAGACCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp AATGTCCAGAAGGAGCGGGAAGCAAAGGTGGCGGGACACTGCCTGAAAGGCGACGTGCACAGGGCACCGTaGCGGACAGGCCCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: NVQKEREAKVAGHCLKGDVHRAP*RTGPSL
Trigger: CAAGCTGGGGCCTGTCCGCCACGGTGCCCTGTGCAC...GTCGCCTTTCAGGCAGTGTCCCGCCACCTTTGCTTCCCGCTCCTTCTGGACATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp CATCTCACATGTAGGACTGACCCGGCCCCATTAAGAGCCTGTGGTGGGCGGCCCCCCATTAAGAGCCTGTaGTGGGCGGCCCGGGAGAGT +
Preference number: 4 (lower is better)
Translates to: HLTCRTDPAPLRACGGRPPIKSL*WAARES
Trigger: ACTCTCCCGGGCCGCCCACCACAGGCTCTTAATGGG...GGGCCGCCCACCACAGGCTCTTAATGGGGCCGGGTCAGTCCTACATGTGAGATG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp GTGGAGGAAACACATTCATACCGGGGTGAGGAGTGCTGGCGGGAGACACGGCTCTGGTGCGGGGGCAGGTaGGTTACAGCCTCCACTGGG +
Preference number: 4 (lower is better)
Translates to: VEETHSYRGEECWRETRLWCGGR*VTASTG
Trigger: CCCAGTGGAGGCTGTAACCCACCTGCCCCCGCACCA...GAGCCGTGTCTCCCGCCAGCACTCCTCACCCCGGTATGAATGTGTTTCCTCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp TCTGGGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCAGCCAGGTGGAAGGATaGCCGTCTGGCTTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: SGPGNMGEPPARLSGSPFSQVEG*PSGFLL
Trigger: GAGAAGAAAGCCAGACGGTCATCCTTCCACCTGGCT...GAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCCCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000396115.6
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000585266.5
CDS-3UTR TCA 90 bp GGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAGGAGCCTTCCTCCTGTaGAGCCAAGGAGTTCTGAGA +
Preference number: 4 (lower is better)
Translates to: GLGIWGSPQLGCPGHPSGGAFLL*SQGVLR
Trigger: TCTCAGAACTCCTTGGCTTCACAGGAGGAAGGCTCC...TCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR TCA 90 bp GTGGAGGAAACACATTCATACCGGGGTGAGGAGTGCTGGCGGGAGACACGGCTCCTCTCTGCCGCTCTGTaGGGGCTTTCCGGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: VEETHSYRGEECWRETRLLSAAL*GLSGPS
Trigger: AGAAGGCCCGGAAAGCCCTCACAGAGCGGCAGAGAG...GAGCCGTGTCTCCCGCCAGCACTCCTCACCCCGGTATGAATGTGTTTCCTCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp AATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAATCACCAGCTCTCTGCCGCTCTGTaGGGGCTTTCCGGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: NMGEPPARLSGSPFWNHQLSAAL*GLSGPS
Trigger: AGAAGGCCCGGAAAGCCCTCACAGAGCGGCAGAGAG...CTGGTGATTCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000579158.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR TCA 90 bp TCTGGGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCAGCACCCACGTGCCCTaGCCTTACATTCCACTGCAA +
Preference number: 4 (lower is better)
Translates to: SGPGNMGEPPARLSGSPFSTHVP*PYIPLQ
Trigger: TTGCAGTGGAATGTAAGGTCAGGGCACGTGGGTGCT...GAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCCCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp TTTGTTTCAGAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGAGGACCTGCAGCAGCGTaGTCAGCTCGCCCGCGGCGA +
Preference number: 4 (lower is better)
Translates to: FVSERQAQHGSQGVFSLRGPAAA*SARPRR
Trigger: TCGCCGCGGGCGAGCTGATCACGCTGCTGCAGGTCC...TCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTCTGAAACAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432992.7
CDS-3UTR GCA 90 bp GTGGGTCTGTCTTCTGGGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCGAATCCCAGGAGAACTaGTGGGACGTTCCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: VGLSSGPGNMGEPPARLSESQEN*WDVPRW
Trigger: CCACCTGGGAACGTCCCAGCAGTTCTCCTGGGATTC...GGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCCCAGAAGACAGACCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000396115.6
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000585266.5
CDS-3UTR GCA 90 bp TGTCCAGAAGGAGCGGGAAGCAAAGGTGGCGGGACACTGCCTGAAAGGCGACAAGCAGTCTCTGGAGGGTaGGCTGGGGTCCCTGATGCG +
Preference number: 4 (lower is better)
Translates to: CPEGAGSKGGGTLPERRQAVSGG*AGVPDA
Trigger: CGCATCAGGGACCCCAGCGCACCCTCCAGAGACTGC...TTGTCGCCTTTCAGGCAGTGTCCCGCCACCTTTGCTTCCCGCTCCTTCTGGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR GCA 90 bp GTGGGTCTGTCTTCTGGGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCCAGCCACGGTGCCGTTaGCTTGGGGGTCCTTCTTAT +
Preference number: 4 (lower is better)
Translates to: VGLSSGPGNMGEPPARLSQPRCR*LGGPSY
Trigger: ATAAGAAGGACCCCCAAGGCAACGGCACCGTGGCTG...GGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCCCAGAAGACAGACCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp AATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAATCACCAGCAAACCCAGCCACGGTaGCGTTGCCTTGGGGGTCCT +
Preference number: 4 (lower is better)
Translates to: NMGEPPARLSGSPFWNHQQTQPR*RCLGGP
Trigger: AGGACCCCCAAGGCAACGGCACCGTGGCTGGGTTTG...CTGGTGATTCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000579158.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp GGGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAGCTTGATCTCCAGCTaGTGGGTCTTCATCTCCAGG +
Preference number: 4 (lower is better)
Translates to: GPGNMGEPPARLSGSPFWSLISS*WVFISR
Trigger: CCTGGAGATGAAGACCCAGCAGCTGGAGATCAAGCT...CCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp TCTGGGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCGTGTACTGGCACAGGTaGTGCCGGATCATCTCTACC +
Preference number: 4 (lower is better)
Translates to: SGPGNMGEPPARLSGSPFVYWHR*CRIIST
Trigger: GGTAGAGATGATCCGGCAGCACCTGTGCCAGTACAC...GAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCCCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000396115.6
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp GGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAATGTTGCCCGTCTTGTaGTCTCTGACCCACAGCTCC +
Preference number: 4 (lower is better)
Translates to: GLGIWGSPQLGCPGHPSGMLPVL*SLTHSS
Trigger: GGAGCTGTGGGTCAGAGAGCACAAGACGGGCAACAT...TCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000396115.6
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp GGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAAAGGTGGCGGGACACTaGCTGAAAGGCGACAACCTA +
Preference number: 4 (lower is better)
Translates to: GLGIWGSPQLGCPGHPSGKVAGH*LKGDNL
Trigger: TAGGTTGTCGCCTTTCAGGCAGTGTCCCGCCACCTT...TCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp TCTGGGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCCTCCCGACTAGAATCTaGCCCTCGCTCATGCTTCTC +
Preference number: 4 (lower is better)
Translates to: SGPGNMGEPPARLSGSPFLPTRI*PSLMLL
Trigger: GAGAAGCATGAGCGAGGGGCAGATTCTAGTCGGGAG...GAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCCCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR GCA 90 bp TCTGGGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCCGCCGCTTCTCAGCATaGCTGGCTTGTCTTGAGCAT +
Preference number: 4 (lower is better)
Translates to: SGPGNMGEPPARLSGSPFRRFSA*LACLEH
Trigger: ATGCTCAAGACAAGCCAGGCATGCTGAGAAGCGGCG...GAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCCCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp GGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGAGACAAGGGCAGGGCACCATCCAGTGGGGTaGAGGTACAGGCCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: GKHSMGVRGSSASETRAGHHPVG*RYRPGC
Trigger: ACAGCCTGGCCTGTACCTGCACCCCACTGGATGGTG...CCCTGCCCTTGTCTCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp GTGGAGGAAACACATTCATACCGGGGTGAGGAGTGCTGGCGGGAGACACGGCTCCTGGGTCCACACAGCTaGCTGGAACCCACGACTCCC +
Preference number: 4 (lower is better)
Translates to: VEETHSYRGEECWRETRLLGPHS*LEPTTP
Trigger: GGGAGTCGTGGGTTCCAGGCAGCTGTGTGGACCCAG...GAGCCGTGTCTCCCGCCAGCACTCCTCACCCCGGTATGAATGTGTTTCCTCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp GTGGGTCTGTCTTCTGGGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCTCCCAGGAGAACTGCTaGGACGTTCCCAGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: VGLSSGPGNMGEPPARLSSQENC*DVPRWS
Trigger: AGACCACCTGGGAACGTCCCAGCAGTTCTCCTGGGA...GGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCCCAGAAGACAGACCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000396115.6
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000585266.5
CDS-3UTR CCA 90 bp GTGGGTCTGTCTTCTGGGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCAGAGCCAGGGCTGGCTaGAATCCCAGGAGAACTGCT +
Preference number: 4 (lower is better)
Translates to: VGLSSGPGNMGEPPARLSRARAG*NPRRTA
Trigger: AGCAGTTCTCCTGGGATTCCAGCCAGCCCTGGCTCT...GGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCCCAGAAGACAGACCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000396115.6
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000585266.5
CDS-3UTR CCA 90 bp AATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAATCACCAGCCGAGGCATAGCGGCTaGCGAGCTGCTTGCGAAGGT +
Preference number: 4 (lower is better)
Translates to: NMGEPPARLSGSPFWNHQPRHSG*RAACEG
Trigger: ACCTTCGCAAGCAGCTCGCCAGCCGCTATGCCTCGG...CTGGTGATTCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000579158.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp AATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAATCACCAGCGCAGCTGCGTGTACTaGCACAGGTGCTGCCGGATC +
Preference number: 4 (lower is better)
Translates to: NMGEPPARLSGSPFWNHQRSCVY*HRCCRI
Trigger: GATCCGGCAGCACCTGTGCCAGTACACGCAGCTGCG...CTGGTGATTCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000323816.8
ENST00000396115.6
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000579158.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp GGGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGACAGCTCCCTGTCTTTaGCCGGGTCCACTTTTCGAA +
Preference number: 4 (lower is better)
Translates to: GPGNMGEPPARLSGSPFWTAPCL*PGPLFE
Trigger: TTCGAAAAGTGGACCCGGCCAAAGACAGGGAGCTGT...CCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000396115.6
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp AATGTCCAGAAGGAGCGGGAAGCAAAGGTGGCGGGACACTGCCTGAAAGGCGACGCCCAGGAGAGAGGGTaGGGGGCATCCACTCGGCAT +
Preference number: 4 (lower is better)
Translates to: NVQKEREAKVAGHCLKGDAQERG*GASTRH
Trigger: ATGCCGAGTGGATGCCCCCCACCCTCTCTCCTGGGC...GTCGCCTTTCAGGCAGTGTCCCGCCACCTTTGCTTCCCGCTCCTTCTGGACATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp GTGGGTCTGTCTTCTGGGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCTCCGGGTCACCCTTCTaGAATCACCAGCTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: VGLSSGPGNMGEPPARLSSGSPF*NHQLSP
Trigger: GGGAGAGAGCTGGTGATTCCAGAAGGGTGACCCGGA...GGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCCCAGAAGACAGACCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000396115.6
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp AATGTCCAGAAGGAGCGGGAAGCAAAGGTGGCGGGACACTGCCTGAAAGGCGACCTGGGCCTGGGAATATaGGGGAGCCCCCAGCTAGGC +
Preference number: 4 (lower is better)
Translates to: NVQKEREAKVAGHCLKGDLGLGI*GSPQLG
Trigger: GCCTAGCTGGGGGCTCCCCCATATTCCCAGGCCCAG...GTCGCCTTTCAGGCAGTGTCCCGCCACCTTTGCTTCCCGCTCCTTCTGGACATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp GAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGAGACAAGGGCGCGGCAAGCACAGCATaGGAGTCAGGGGGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: ERQAQHGSQGVFSLRDKGAASTA*ESGGLQ
Trigger: CTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGC...GCCCTTGTCTCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp TCTGGGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGCGCCTGATCTCATaGGACACGATTCAGCGCTCA +
Preference number: 4 (lower is better)
Translates to: SGPGNMGEPPARLSGSPFWRLIS*DTIQRS
Trigger: TGAGCGCTGAATCGTGTCCCATGAGATCAGGCGCCA...GAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCCCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp GGGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGCAGCTGGGGGAAGGATaGATTGGCATTTCCAGAGGA +
Preference number: 4 (lower is better)
Translates to: GPGNMGEPPARLSGSPFWQLGEG*IGISRG
Trigger: TCCTCTGGAAATGCCAATCCATCCTTCCCCCAGCTG...CCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp CAGAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGAGACAAGGCAGGCCCCAGCTTGCTaGCCTCTGAGACGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: QSGKHSMGVRGSSASETRQAPAC*PLRRAG
Trigger: ACCAGCTCGTCTCAGAGGCCAGCAAGCTGGGGCCTG...CCTTGTCTCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp AATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAATCACCAGATTAAGAGCCTGTGGTaGGCGGCCCGGGAGAGTGGG +
Preference number: 4 (lower is better)
Translates to: NMGEPPARLSGSPFWNHQIKSLW*AARESG
Trigger: CCCACTCTCCCGGGCCGCCCACCACAGGCTCTTAAT...CTGGTGATTCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp TCTGGGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCGAGCCATCTGGGGGATaGCAAAGACTTGCCCTAACC +
Preference number: 4 (lower is better)
Translates to: SGPGNMGEPPARLSGSPFEPSGG*QRLALT
Trigger: GGTTAGGGCAAGTCTTTGCCATCCCCCAGATGGCTC...GAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCCCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp GGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGATGTGCATCAGTCTCCTaGGTGGAGGCAGGTAGAAGG +
Preference number: 4 (lower is better)
Translates to: GLGIWGSPQLGCPGHPSGCASVS*VEAGRR
Trigger: CCTTCTACCTGCCTCCACCCAGGAGACTGATGCACA...TCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp TCTGGGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTTGAATGTCTGTCCCTaGGTCCACACAGCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: SGPGNMGEPPARLSGSPFLNVCP*VHTAAW
Trigger: CCAGGCAGCTGTGTGGACCCAGGGACAGACATTCAA...GAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCCCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR CAA 72 bp AAGGTGCACAGGGCACCGTGGCGGACAGGCCCCAGCTaGCTGGCCTCTGAGACGAGCTGGTTTGTTTCCATC +
Preference number: 4 (lower is better)
Translates to: KVHRAPWRTGPS*LASETSWFVSI
Trigger: GATGGAAACAAACCAGCTCGTCTCAGAGGCCAGCAAGCTGGGGCCTGTCCGCCACGGTGCCCTGTGCACCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
3UTR CAA 72 bp CTGCTGCAGGTGATGCTGGAAGGGAAGCGCCCCCACTaGACAGATGAGTGCACGGAGGTCCCGACAGGGGAT +
Preference number: 4 (lower is better)
Translates to: LLQVMLEGKRPH*TDECTEVPTGD
Trigger: ATCCCCTGTCGGGACCTCCGTGCACTCATCTGTCAAGTGGGGGCGCTTCCCTTCCAGCATCACCTGCAGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp GAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGAGACAAGGGCCATTGGTGGTCGTGTTaGCATAGTACCGCCGGCCCT +
Preference number: 4 (lower is better)
Translates to: ERQAQHGSQGVFSLRDKGHWWSC*HSTAGP
Trigger: AGGGCCGGCGGTACTATGTCAACACGACCACCAATG...GCCCTTGTCTCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000585266.5
CDS-3UTR TCA 90 bp GTGGAGGAAACACATTCATACCGGGGTGAGGAGTGCTGGCGGGAGACACGGCTCGTGCGCTGGGGTCCCTaGTGCGTGGTATCCATTCAC +
Preference number: 4 (lower is better)
Translates to: VEETHSYRGEECWRETRLVRWGP*CVVSIH
Trigger: GTGAATGGATACCACGCATCAGGGACCCCAGCGCAC...GAGCCGTGTCTCCCGCCAGCACTCCTCACCCCGGTATGAATGTGTTTCCTCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp AATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAATCACCAGGTGCGCTGGGGTCCCTaGTGCGTGGTATCCATTCAC +
Preference number: 4 (lower is better)
Translates to: NMGEPPARLSGSPFWNHQVRWGP*CVVSIH
Trigger: GTGAATGGATACCACGCATCAGGGACCCCAGCGCAC...CTGGTGATTCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000396115.6
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000579158.5
ENST00000585266.5
CDS-3UTR TCA 90 bp GGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGACTTTTTGCTTGGCGATaGGGATCCCAGGTTCTGGGA +
Preference number: 4 (lower is better)
Translates to: GLGIWGSPQLGCPGHPSGLFAWR*GSQVLG
Trigger: TCCCAGAACCTGGGATCCTCATCGCCAAGCAAAAAG...TCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000396115.6
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000585266.5
CDS-3UTR TCA 90 bp AATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAATCACCAGGATCCACACAGCGCATaGGGTCGTCTCCAGCCTGTG +
Preference number: 4 (lower is better)
Translates to: NMGEPPARLSGSPFWNHQDPHSA*GRLQPV
Trigger: CACAGGCTGGAGACGACCTCATGCGCTGTGTGGATC...CTGGTGATTCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000579158.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR TCA 90 bp CATCTCACATGTAGGACTGACCCGGCCCCATTAAGAGCCTGTGGTGGGCGGCCCCCGTCTTGTGCTCTCTaGCCCACAGCTCCCTGTCTT +
Preference number: 4 (lower is better)
Translates to: HLTCRTDPAPLRACGGRPPSCAL*PTAPCL
Trigger: AAGACAGGGAGCTGTGGGTCAGAGAGCACAAGACGG...GGGCCGCCCACCACAGGCTCTTAATGGGGCCGGGTCAGTCCTACATGTGAGATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR TCA 90 bp GTGGGTCTGTCTTCTGGGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCCAGCTTGCTGGCCTCTaGGACGAGCTGGTTTGTTTC +
Preference number: 4 (lower is better)
Translates to: VGLSSGPGNMGEPPARLSQLAGL*DELVCF
Trigger: GAAACAAACCAGCTCGTCTCAGAGGCCAGCAAGCTG...GGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCCCAGAAGACAGACCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR TCA 90 bp GGGCTCCCGACTAGAATCTGCCCCTCGCTCATGCTTCTCCCGGCCCCTTTAGACCAAACTGGGCCAACCTaGGCTACCCTGGAAGACGCA +
Preference number: 4 (lower is better)
Translates to: GLPTRICPSLMLLPAPLDQTGPT*ATLEDA
Trigger: TGCGTCTTCCAGGGTAGCTCAGGTTGGCCCAGTTTG...GTCTAAAGGGGCCGGGAGAAGCATGAGCGAGGGGCAGATTCTAGTCGGGAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp GATCCTGACACCTGGCTTAGAGACAGAGCCCTCCCTACCCTGATCCTCCAAAGCCCAGGGTGGTCCCACTaGCAGAATCTCAGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: DPDTWLRDRALPTLILQSPGWSH*QNLRAA
Trigger: GGCGGCCCTGAGATTCTGTCAGTGGGACCACCCTGG...GCTTTGGAGGATCAGGGTAGGGAGGGCTCTGTCTCTAAGCCAGGTGTCAGGATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp GGATCCAGAAATGTCTCTGGTTCGCATAGAGAGGTACCCAACTGGTCTCGGGACTTCGGCTCCCTACCTTaGGGCCCCGGGGGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: GSRNVSGSHREVPNWSRDFGSLP*GPGGSG
Trigger: GCCTGAGCCCCCGGGGCCTCAAGGTAGGGAGCCGAA...GTCCCGAGACCAGTTGGGTACCTCTCTATGCGAACCAGAGACATTTCTGGATCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp GGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGACTTATCCTAAAGCCGTaGGCAAACGCTACTCGCTGG +
Preference number: 4 (lower is better)
Translates to: GLGIWGSPQLGCPGHPSGLILKP*ANATRW
Trigger: CCAGCGAGTAGCGTTTGCTCACGGCTTTAGGATAAG...TCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000396115.6
ENST00000437099.6
CDS-3UTR TCA 90 bp TCTGGGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCGCCGCTCTAGCTCTGTaGTGGTGTTTTCCTTGCTCT +
Preference number: 4 (lower is better)
Translates to: SGPGNMGEPPARLSGSPFAALAL*WCFPCS
Trigger: AGAGCAAGGAAAACACCATCACAGAGCTAGAGCGGC...GAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCCCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000396115.6
CDS-3UTR TCA 90 bp GGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGAGACAAGGGCAGGGGCAGTGAGAAGCACCTaGGCATTCAGAGCCCCTGCA +
Preference number: 4 (lower is better)
Translates to: GKHSMGVRGSSASETRAGAVRST*AFRAPA
Trigger: TGCAGGGGCTCTGAATGCTCAGGTGCTTCTCACTGC...CCCTGCCCTTGTCTCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000542249.5
CDS-3UTR TCA 90 bp GGATTTCCAGGGCATGGGCTCCCGACTAGAATCTGCCCCTCGCTCATGCTTCTCTCCGGGAAATGGGGCTaGGGCAAGTCGCTAGCCCAG +
Preference number: 4 (lower is better)
Translates to: GFPGHGLPTRICPSLMLLSGKWG*GKSLAQ
Trigger: CTGGGCTAGCGACTTGCCTCAGCCCCATTTCCCGGA...GAGAAGCATGAGCGAGGGGCAGATTCTAGTCGGGAGCCCATGCCCTGGAAATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585266.5
CDS-3UTR GCA 90 bp AATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAATCACCAGGGCTGGCGAGCTGCTTaGGAAGGTCGGCAATGTGGT +
Preference number: 4 (lower is better)
Translates to: NMGEPPARLSGSPFWNHQGWRAA*EGRQCG
Trigger: ACCACATTGCCGACCTTCGCAAGCAGCTCGCCAGCC...CTGGTGATTCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000579158.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp GTGGGTCTGTCTTCTGGGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCATCTCCAGGTCTCTCTaGCGCTCTGTGAGGGCTTTC +
Preference number: 4 (lower is better)
Translates to: VGLSSGPGNMGEPPARLSISRSL*RSVRAF
Trigger: GAAAGCCCTCACAGAGCGGCAGAGAGACCTGGAGAT...GGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCCCAGAAGACAGACCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp GGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAAGCTTGATCTCCAGCTaGTGGGTCTTCATCTCCAGG +
Preference number: 4 (lower is better)
Translates to: GLGIWGSPQLGCPGHPSGSLISS*WVFISR
Trigger: CCTGGAGATGAAGACCCAGCAGCTGGAGATCAAGCT...TCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp GTGGGTCTGTCTTCTGGGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCTACTGGCACAGGTGCTaGCGGATCATCTCTACCCTC +
Preference number: 4 (lower is better)
Translates to: VGLSSGPGNMGEPPARLSYWHRC*RIISTL
Trigger: GAGGGTAGAGATGATCCGGCAGCACCTGTGCCAGTA...GGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCCCAGAAGACAGACCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000396115.6
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp GAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGAGACAAGGGCGTTTCATGCCGCAGCTaGGTGTACTGGCACAGGTGC +
Preference number: 4 (lower is better)
Translates to: ERQAQHGSQGVFSLRDKGVSCRS*VYWHRC
Trigger: GCACCTGTGCCAGTACACGCAGCTGCGGCATGAAAC...GCCCTTGTCTCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp GGGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAACATGTCTGTTTCATaGCGCAGCTGCGTGTACTGG +
Preference number: 4 (lower is better)
Translates to: GPGNMGEPPARLSGSPFWNMSVS*RSCVYW
Trigger: CCAGTACACGCAGCTGCGGCATGAAACAGACATGTT...CCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000396115.6
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp GGGGTGGTGCGGGGGCAGGTGGGTTACAGCCTCCACTGGGATCAGGGTTTCAACAAGGTGGCGGGACACTaGCTGAAAGGCGACAACCTA +
Preference number: 4 (lower is better)
Translates to: GVVRGQVGYSLHWDQGFNKVAGH*LKGDNL
Trigger: TAGGTTGTCGCCTTTCAGGCAGTGTCCCGCCACCTT...GTTGAAACCCTGATCCCAGTGGAGGCTGTAACCCACCTGCCCCCGCACCACCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp GGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGACAGCCTTCTTGTCCATaGTGCTTCTGCTCGCCTTTC +
Preference number: 4 (lower is better)
Translates to: GLGIWGSPQLGCPGHPSGQPSCP*CFCSPF
Trigger: GAAAGGCGAGCAGAAGCAGCATGGACAAGAAGGCTG...TCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp GGGGTGGTGCGGGGGCAGGTGGGTTACAGCCTCCACTGGGATCAGGGTTTCAACGAGAGAGCACCCACGTaGCCTGACCTTACATTCCAC +
Preference number: 4 (lower is better)
Translates to: GVVRGQVGYSLHWDQGFNERAPT*PDLTFH
Trigger: GTGGAATGTAAGGTCAGGGCACGTGGGTGCTCTCTC...GTTGAAACCCTGATCCCAGTGGAGGCTGTAACCCACCTGCCCCCGCACCACCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp TTTGTTTCAGAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGACCGCCGTCCGGGACCTaGAGCAGCGTGATCAGCTCG +
Preference number: 4 (lower is better)
Translates to: FVSERQAQHGSQGVFSLRPPSGT*SSVISS
Trigger: CGAGCTGATCACGCTGCTGCAGGTCCCGGACGGCGG...TCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTCTGAAACAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432992.7
CDS-3UTR CCA 90 bp AATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAATCACCAGGCTCTGCCAGCCAGGTaGAAGGATGACCGTCTGGCT +
Preference number: 4 (lower is better)
Translates to: NMGEPPARLSGSPFWNHQALPAR*KDDRLA
Trigger: AGCCAGACGGTCATCCTTCCACCTGGCTGGCAGAGC...CTGGTGATTCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000396115.6
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000579158.5
ENST00000585266.5
CDS-3UTR CCA 90 bp GGGGTGGTGCGGGGGCAGGTGGGTTACAGCCTCCACTGGGATCAGGGTTTCAACTGGGACGTTCCCAGGTaGTCTCATTGGTGGTCGTGT +
Preference number: 4 (lower is better)
Translates to: GVVRGQVGYSLHWDQGFNWDVPR*SHWWSC
Trigger: ACACGACCACCAATGAGACCACCTGGGAACGTCCCA...GTTGAAACCCTGATCCCAGTGGAGGCTGTAACCCACCTGCCCCCGCACCACCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp GGGGTGGTGCGGGGGCAGGTGGGTTACAGCCTCCACTGGGATCAGGGTTTCAACTTCCGGCATCGTGTCTaGGTGAGGGAACGTCACACA +
Preference number: 4 (lower is better)
Translates to: GVVRGQVGYSLHWDQGFNFRHRV*VRERHT
Trigger: TGTGTGACGTTCCCTCACCCAGACACGATGCCGGAA...GTTGAAACCCTGATCCCAGTGGAGGCTGTAACCCACCTGCCCCCGCACCACCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp GGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGAGACAAGGGCAGGGCGTCTCCAGCCTGTGTaGACTTTCTCCGCGCCTTCT +
Preference number: 4 (lower is better)
Translates to: GKHSMGVRGSSASETRAGRLQPV*TFSAPS
Trigger: AGAAGGCGCGGAGAAAGTCCACACAGGCTGGAGACG...CCCTGCCCTTGTCTCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp TGTTTGTTTCAGAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGGCATCCACTCGGCATaGGCCCCATGGTGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: CLFQSGKHSMGVRGSSASGIHSA*APWWEP
Trigger: GGGCTCCCACCATGGGGCCCATGCCGAGTGGATGCC...TGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTCTGAAACAAACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp CTGTTTGTTTCAGAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCGCCCAGGAGAGAGGGTaGGGGGCATCCACTCGGCAT +
Preference number: 4 (lower is better)
Translates to: LFVSERQAQHGSQGVFSLAQERG*GASTRH
Trigger: ATGCCGAGTGGATGCCCCCCACCCTCTCTCCTGGGC...GAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTCTGAAACAAACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp AAGGTGGCGGGACACTGCCTGAAAGGCGACAACCTAGTGTGGCCACAAGAGAGTGCCCAGGAGAGAGGGTaGGGGGCATCCACTCGGCAT +
Preference number: 4 (lower is better)
Translates to: KVAGHCLKGDNLVWPQESAQERG*GASTRH
Trigger: ATGCCGAGTGGATGCCCCCCACCCTCTCTCCTGGGC...ACTCTCTTGTGGCCACACTAGGTTGTCGCCTTTCAGGCAGTGTCCCGCCACCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp AATGTCCAGAAGGAGCGGGAAGCAAAGGTGGCGGGACACTGCCTGAAAGGCGACCAGGCCCCAGCTTGCTaGCCTCTGAGACGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: NVQKEREAKVAGHCLKGDQAPAC*PLRRAG
Trigger: ACCAGCTCGTCTCAGAGGCCAGCAAGCTGGGGCCTG...GTCGCCTTTCAGGCAGTGTCCCGCCACCTTTGCTTCCCGCTCCTTCTGGACATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp CAGAAACGGGCCCCTGTTCATACGGATAGGGGTTCTGGACTGTTGACTCTAGCCGTGCACAGGGCACCGTaGCGGACAGGCCCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: QKRAPVHTDRGSGLLTLAVHRAP*RTGPSL
Trigger: CAAGCTGGGGCCTGTCCGCCACGGTGCCCTGTGCAC...GGCTAGAGTCAACAGTCCAGAACCCCTATCCGTATGAACAGGGGCCCGTTTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp TGCTGGCCTCTGAGACGAGCTGGTTTGTTTCCATCCCTGAAGCCTTTGGACGAGGTGCACAGGGCACCGTaGCGGACAGGCCCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: CWPLRRAGLFPSLKPLDEVHRAP*RTGPSL
Trigger: CAAGCTGGGGCCTGTCCGCCACGGTGCCCTGTGCAC...CTCGTCCAAAGGCTTCAGGGATGGAAACAAACCAGCTCGTCTCAGAGGCCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp TGTCCAGAAGGAGCGGGAAGCAAAGGTGGCGGGACACTGCCTGAAAGGCGACAAATTAAGAGCCTGTGGTaGGCGGCCCGGGAGAGTGGG +
Preference number: 4 (lower is better)
Translates to: CPEGAGSKGGGTLPERRQIKSLW*AARESG
Trigger: CCCACTCTCCCGGGCCGCCCACCACAGGCTCTTAAT...TTGTCGCCTTTCAGGCAGTGTCCCGCCACCTTTGCTTCCCGCTCCTTCTGGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp GTGGGTCTGTCTTCTGGGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCGAGCCATCTGGGGGATaGCAAAGACTTGCCCTAACC +
Preference number: 4 (lower is better)
Translates to: VGLSSGPGNMGEPPARLSEPSGG*QRLALT
Trigger: GGTTAGGGCAAGTCTTTGCCATCCCCCAGATGGCTC...GGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCCCAGAAGACAGACCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp GGGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGCACCAAGTAAGGGTTTaGTGCAGGGCTCTGGAATGT +
Preference number: 4 (lower is better)
Translates to: GPGNMGEPPARLSGSPFWHQVRV*CRALEC
Trigger: ACATTCCAGAGCCCTGCACCAAACCCTTACTTGGTG...CCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp GGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAACCCAACCCCAGATCTaGACAGAGTGGTTCTCCATC +
Preference number: 4 (lower is better)
Translates to: GLGIWGSPQLGCPGHPSGTQPQI*TEWFSI
Trigger: GATGGAGAACCACTCTGTCCAGATCTGGGGTTGGGT...TCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR CCA 90 bp GGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAAGTGACCTCCAAAAATaGACTGGCCCAAACTGGGCC +
Preference number: 4 (lower is better)
Translates to: GLGIWGSPQLGCPGHPSGSDLQK*TGPNWA
Trigger: GGCCCAGTTTGGGCCAGTCCATTTTTGGAGGTCACT...TCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp GGGCTCCCGACTAGAATCTGCCCCTCGCTCATGCTTCTCCCGGCCCCTTTAGACGGCCTTAACTGGGTGTaGTCCTGTCCCTGCCACCAT +
Preference number: 4 (lower is better)
Translates to: GLPTRICPSLMLLPAPLDGLNWV*SCPCHH
Trigger: ATGGTGGCAGGGACAGGACCACACCCAGTTAAGGCC...GTCTAAAGGGGCCGGGAGAAGCATGAGCGAGGGGCAGATTCTAGTCGGGAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp CATCTCACATGTAGGACTGACCCGGCCCCATTAAGAGCCTGTGGTGGGCGGCCCGGGTCACACTCAGCCTaGTCTGGCCTTAACTGGGTG +
Preference number: 4 (lower is better)
Translates to: HLTCRTDPAPLRACGGRPGSHSA*SGLNWV
Trigger: CACCCAGTTAAGGCCAGACCAGGCTGAGTGTGACCC...GGGCCGCCCACCACAGGCTCTTAATGGGGCCGGGTCAGTCCTACATGTGAGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp GCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCCGCCGGACATGGCCTTaGCGCCCGGGTTCACAGCGC +
Preference number: 4 (lower is better)
Translates to: ACDSDPYKTRQGPQSSSLRRTWP*RPGSQR
Trigger: GCGCTGTGAACCCGGGCGCCAAGGCCATGTCCGGCG...GAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432992.7
CDS-3UTR CCA 90 bp ATGGATTTCCAGGGCATGGGCTCCCGACTAGAATCTGCCCCTCGCTCATGCTTCCCAGGGCCAGTGTTCTaGGCACCCCAGCGGAGGTTC +
Preference number: 4 (lower is better)
Translates to: MDFQGMGSRLESAPRSCFPGPVF*APQRRF
Trigger: GAACCTCCGCTGGGGTGCCCAGAACACTGGCCCTGG...GAAGCATGAGCGAGGGGCAGATTCTAGTCGGGAGCCCATGCCCTGGAAATCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585266.5
3UTR CAA 72 bp TTGGGGCCCCTGTCACTAAGGATGGCTGGCGTCCCTTaGAATGTCTGTCCCTGGGTCCACACAGCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: LGPLSLRMAGVP*NVCPWVHTAAW
Trigger: CCAGGCAGCTGTGTGGACCCAGGGACAGACATTCAAAGGGACGCCAGCCATCCTTAGTGACAGGGGCCCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp AATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAATCACCAGCATTGGTGGTCGTGTTaGCATAGTACCGCCGGCCCT +
Preference number: 4 (lower is better)
Translates to: NMGEPPARLSGSPFWNHQHWWSC*HSTAGP
Trigger: AGGGCCGGCGGTACTATGTCAACACGACCACCAATG...CTGGTGATTCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000396115.6
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000579158.5
ENST00000585266.5
CDS-3UTR TCA 90 bp CATCTCACATGTAGGACTGACCCGGCCCCATTAAGAGCCTGTGGTGGGCGGCCCGGCATCGTGTCTGGGTaGGGGAACGTCACACAGTTT +
Preference number: 4 (lower is better)
Translates to: HLTCRTDPAPLRACGGRPGIVSG*GNVTQF
Trigger: AAACTGTGTGACGTTCCCTCACCCAGACACGATGCC...GGGCCGCCCACCACAGGCTCTTAATGGGGCCGGGTCAGTCCTACATGTGAGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR TCA 90 bp GGGCTCCCGACTAGAATCTGCCCCTCGCTCATGCTTCTCCCGGCCCCTTTAGACGGAGCCTTCCTCCTGTaGAGCCAAGGAGTTCTGAGA +
Preference number: 4 (lower is better)
Translates to: GLPTRICPSLMLLPAPLDGAFLL*SQGVLR
Trigger: TCTCAGAACTCCTTGGCTTCACAGGAGGAAGGCTCC...GTCTAAAGGGGCCGGGAGAAGCATGAGCGAGGGGCAGATTCTAGTCGGGAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR TCA 90 bp GGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGAGACAAGGGCAGGGGCAGAGAACTTGAGGTaGACTTCTGCTTCGTCCGCC +
Preference number: 4 (lower is better)
Translates to: GKHSMGVRGSSASETRAGAENLR*TSASSA
Trigger: GGCGGACGAAGCAGAAGTTCACCTCAAGTTCTCTGC...CCCTGCCCTTGTCTCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR TCA 90 bp CTGTTTGTTTCAGAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCCTCTCTGCCGCTCTGTaGGGGCTTTCCGGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: LFVSERQAQHGSQGVFSLLSAAL*GLSGPS
Trigger: AGAAGGCCCGGAAAGCCCTCACAGAGCGGCAGAGAG...GAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTCTGAAACAAACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR TCA 90 bp AAGGTGGCGGGACACTGCCTGAAAGGCGACAACCTAGTGTGGCCACAAGAGAGTCTCTCTGCCGCTCTGTaGGGGCTTTCCGGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: KVAGHCLKGDNLVWPQESLSAAL*GLSGPS
Trigger: AGAAGGCCCGGAAAGCCCTCACAGAGCGGCAGAGAG...ACTCTCTTGTGGCCACACTAGGTTGTCGCCTTTCAGGCAGTGTCCCGCCACCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR TCA 90 bp GTGGAGGAAACACATTCATACCGGGGTGAGGAGTGCTGGCGGGAGACACGGCTCCCGTCTTGTGCTCTCTaGCCCACAGCTCCCTGTCTT +
Preference number: 4 (lower is better)
Translates to: VEETHSYRGEECWRETRLPSCAL*PTAPCL
Trigger: AAGACAGGGAGCTGTGGGTCAGAGAGCACAAGACGG...GAGCCGTGTCTCCCGCCAGCACTCCTCACCCCGGTATGAATGTGTTTCCTCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp AATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAATCACCAGCCGTCTTGTGCTCTCTaGCCCACAGCTCCCTGTCTT +
Preference number: 4 (lower is better)
Translates to: NMGEPPARLSGSPFWNHQPSCAL*PTAPCL
Trigger: AAGACAGGGAGCTGTGGGTCAGAGAGCACAAGACGG...CTGGTGATTCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000323816.8
ENST00000396115.6
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000579158.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR TCA 90 bp AATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAATCACCAGGGTGCGGCTGTGAGCTaGATGGCACCTTCTACCCAT +
Preference number: 4 (lower is better)
Translates to: NMGEPPARLSGSPFWNHQGAAVS*MAPSTH
Trigger: ATGGGTAGAAGGTGCCATTCAGCTCACAGCCGCACC...CTGGTGATTCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR TCA 90 bp CAGAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGAGACAAGGGAGGTAGTTCCATCCTaGCCTCTCCAGGCATGGTGG +
Preference number: 4 (lower is better)
Translates to: QSGKHSMGVRGSSASETREVVPS*PLQAWW
Trigger: CCACCATGCCTGGAGAGGTCAGGATGGAACTACCTC...CCTTGTCTCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR TCA 90 bp GGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAGCAGGTAGAAGGGGCTaGCTTGTTCTCAGAAATGGA +
Preference number: 4 (lower is better)
Translates to: GLGIWGSPQLGCPGHPSGAGRRG*LVLRNG
Trigger: TCCATTTCTGAGAACAAGTCAGCCCCTTCTACCTGC...TCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp AGGGCACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTTCGGCTCCCTACCTTaGGGCCCCGGGGGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: RAQACDSDPYKTRQGPQSFGSLP*GPGGSG
Trigger: GCCTGAGCCCCCGGGGCCTCAAGGTAGGGAGCCGAA...ACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTGCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp TTTGTTTCAGAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGACCCGTCTGCTGCAGGTaGTGCTGGAAGGGAAGCGCC +
Preference number: 4 (lower is better)
Translates to: FVSERQAQHGSQGVFSLRPVCCR*CWKGSA
Trigger: GGCGCTTCCCTTCCAGCATCACCTGCAGCAGACGGG...TCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTCTGAAACAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp CATCTCACATGTAGGACTGACCCGGCCCCATTAAGAGCCTGTGGTGGGCGGCCCATGTGCTCGTGTCTGTaGAGGGGTTGCTTCCGGTCA +
Preference number: 4 (lower is better)
Translates to: HLTCRTDPAPLRACGGRPMCSCL*RGCFRS
Trigger: TGACCGGAAGCAACCCCTTCACAGACACGAGCACAT...GGGCCGCCCACCACAGGCTCTTAATGGGGCCGGGTCAGTCCTACATGTGAGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp TGTTTGTTTCAGAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGCAGTCTCTGGAGGGTaGGCTGGGGTCCCTGATGCG +
Preference number: 4 (lower is better)
Translates to: CLFQSGKHSMGVRGSSASAVSGG*AGVPDA
Trigger: CGCATCAGGGACCCCAGCGCACCCTCCAGAGACTGC...TGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTCTGAAACAAACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000585266.5
CDS-3UTR GCA 90 bp GGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGACCTTGCTCTGCTTTTTaGTTGGCGATGAGGATCCCA +
Preference number: 4 (lower is better)
Translates to: GLGIWGSPQLGCPGHPSGPCSAF*LAMRIP
Trigger: TGGGATCCTCATCGCCAAGCAAAAAGCAGAGCAAGG...TCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000396115.6
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp TCTGGGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCCCTTGCTCTGCTTTTTaGTTGGCGATGAGGATCCCA +
Preference number: 4 (lower is better)
Translates to: SGPGNMGEPPARLSGSPFPCSAF*LAMRIP
Trigger: TGGGATCCTCATCGCCAAGCAAAAAGCAGAGCAAGG...GAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCCCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000396115.6
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp GGGGTGGTGCGGGGGCAGGTGGGTTACAGCCTCCACTGGGATCAGGGTTTCAACGTTGGTTTCAGCAGCTaGTGTTCCGGCATCGTGTCT +
Preference number: 4 (lower is better)
Translates to: GVVRGQVGYSLHWDQGFNVGFSS*CSGIVS
Trigger: AGACACGATGCCGGAACAGCAGCTGCTGAAACCAAC...GTTGAAACCCTGATCCCAGTGGAGGCTGTAACCCACCTGCCCCCGCACCACCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp AATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAATCACCAGCAGCCACGGTGCCGTTaGCTTGGGGGTCCTTCTTAT +
Preference number: 4 (lower is better)
Translates to: NMGEPPARLSGSPFWNHQQPRCR*LGGPSY
Trigger: ATAAGAAGGACCCCCAAGGCAACGGCACCGTGGCTG...CTGGTGATTCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000579158.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp ACAGTCCTGAACACCACACGCAATCTCCAAAGGCCATCGCCCCAACCTCACCCCGGCTGGCGAGCTGCTTaGGAAGGTCGGCAATGTGGT +
Preference number: 4 (lower is better)
Translates to: TVLNTTRNLQRPSPQPHPGWRAA*EGRQCG
Trigger: ACCACATTGCCGACCTTCGCAAGCAGCTCGCCAGCC...GGGGTGAGGTTGGGGCGATGGCCTTTGGAGATTGCGTGTGGTGTTCAGGACTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp GGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGAGACAAGGGCAGGGTACTGGCACAGGTGCTaGCGGATCATCTCTACCCTC +
Preference number: 4 (lower is better)
Translates to: GKHSMGVRGSSASETRAGYWHRC*RIISTL
Trigger: GAGGGTAGAGATGATCCGGCAGCACCTGTGCCAGTA...CCCTGCCCTTGTCTCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp AATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAATCACCAGGTTTCATGCCGCAGCTaGGTGTACTGGCACAGGTGC +
Preference number: 4 (lower is better)
Translates to: NMGEPPARLSGSPFWNHQVSCRS*VYWHRC
Trigger: GCACCTGTGCCAGTACACGCAGCTGCGGCATGAAAC...CTGGTGATTCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000323816.8
ENST00000396115.6
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000579158.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp CAGAAACGGGCCCCTGTTCATACGGATAGGGGTTCTGGACTGTTGACTCTAGCCAGGGCAGCCCAAAGGTaGACAGGGCACCGTGGCGGA +
Preference number: 4 (lower is better)
Translates to: QKRAPVHTDRGSGLLTLARAAQR*TGHRGG
Trigger: TCCGCCACGGTGCCCTGTGCACCTTTGGGCTGCCCT...GGCTAGAGTCAACAGTCCAGAACCCCTATCCGTATGAACAGGGGCCCGTTTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp GGGGTGGTGCGGGGGCAGGTGGGTTACAGCCTCCACTGGGATCAGGGTTTCAACCAGCAGTCCCAGCCCTaGCATACACAAGAAGACAGA +
Preference number: 4 (lower is better)
Translates to: GVVRGQVGYSLHWDQGFNQQSQP*HTQEDR
Trigger: TCTGTCTTCTTGTGTATGGCAGGGCTGGGACTGCTG...GTTGAAACCCTGATCCCAGTGGAGGCTGTAACCCACCTGCCCCCGCACCACCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp GGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAGAATTCTGCCCTCACTaGAGATGTGCAGGTCAAACC +
Preference number: 4 (lower is better)
Translates to: GLGIWGSPQLGCPGHPSGEFCPH*RCAGQT
Trigger: GGTTTGACCTGCACATCTGCAGTGAGGGCAGAATTC...TCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR GCA 90 bp GGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGAGACAAGGGCAGGGTCACCCAAGCTGGAGTaGAGTGGCCCGATCTTGGTT +
Preference number: 4 (lower is better)
Translates to: GKHSMGVRGSSASETRAGSPKLE*SGPILV
Trigger: AACCAAGATCGGGCCACTGCACTCCAGCTTGGGTGA...CCCTGCCCTTGTCTCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp GGGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGCTCGCTCTAACCTGCTaGAATGGGAATTGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: GPGNMGEPPARLSGSPFWLALTC*NGNCFF
Trigger: GAAGAAGCAATTCCCATTGCAGCAGGTTAGAGCGAG...CCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp CCGACTAGAATCTGCCCCTCGCTCATGCTTCTCCCGGCCCCTTTAGACTCTTTATACCGGGGTGAGGAGTaGTGGCGGGAGACACGGCTC +
Preference number: 4 (lower is better)
Translates to: PTRICPSLMLLPAPLDSLYRGEE*WRETRL
Trigger: GAGCCGTGTCTCCCGCCAGCACTCCTCACCCCGGTA...TAAAGAGTCTAAAGGGGCCGGGAGAAGCATGAGCGAGGGGCAGATTCTAGTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp GGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGACCATTCCAGGCTTCATaGCTCGTCTTGCGTTCAATC +
Preference number: 4 (lower is better)
Translates to: GLGIWGSPQLGCPGHPSGPFQAS*LVLRSI
Trigger: GATTGAACGCAAGACGAGCCATGAAGCCTGGAATGG...TCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000323816.8
CDS-3UTR CCA 90 bp AATGTCCAGAAGGAGCGGGAAGCAAAGGTGGCGGGACACTGCCTGAAAGGCGACGCTCTGCCAGCCAGGTaGAAGGATGACCGTCTGGCT +
Preference number: 4 (lower is better)
Translates to: NVQKEREAKVAGHCLKGDALPAR*KDDRLA
Trigger: AGCCAGACGGTCATCCTTCCACCTGGCTGGCAGAGC...GTCGCCTTTCAGGCAGTGTCCCGCCACCTTTGCTTCCCGCTCCTTCTGGACATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR CCA 90 bp GTGGAGGAAACACATTCATACCGGGGTGAGGAGTGCTGGCGGGAGACACGGCTCTCCCAGGAGAACTGCTaGGACGTTCCCAGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: VEETHSYRGEECWRETRLSQENC*DVPRWS
Trigger: AGACCACCTGGGAACGTCCCAGCAGTTCTCCTGGGA...GAGCCGTGTCTCCCGCCAGCACTCCTCACCCCGGTATGAATGTGTTTCCTCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp AATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAATCACCAGTCCCAGGAGAACTGCTaGGACGTTCCCAGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: NMGEPPARLSGSPFWNHQSQENC*DVPRWS
Trigger: AGACCACCTGGGAACGTCCCAGCAGTTCTCCTGGGA...CTGGTGATTCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000396115.6
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000579158.5
ENST00000585266.5
CDS-3UTR CCA 90 bp AATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAATCACCAGAGAGCCAGGGCTGGCTaGAATCCCAGGAGAACTGCT +
Preference number: 4 (lower is better)
Translates to: NMGEPPARLSGSPFWNHQRARAG*NPRRTA
Trigger: AGCAGTTCTCCTGGGATTCCAGCCAGCCCTGGCTCT...CTGGTGATTCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000396115.6
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000579158.5
ENST00000585266.5
CDS-3UTR CCA 90 bp GGGCTCCCGACTAGAATCTGCCCCTCGCTCATGCTTCTCCCGGCCCCTTTAGACTTTCGGACACTCATGTaGGCAGTCTCTGGAGGGTGC +
Preference number: 4 (lower is better)
Translates to: GLPTRICPSLMLLPAPLDFRTLM*AVSGGC
Trigger: GCACCCTCCAGAGACTGCCCACATGAGTGTCCGAAA...GTCTAAAGGGGCCGGGAGAAGCATGAGCGAGGGGCAGATTCTAGTCGGGAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR CCA 90 bp GGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGAGACAAGGGCAGGGTTCCGGCATCGTGTCTaGGTGAGGGAACGTCACACA +
Preference number: 4 (lower is better)
Translates to: GKHSMGVRGSSASETRAGFRHRV*VRERHT
Trigger: TGTGTGACGTTCCCTCACCCAGACACGATGCCGGAA...CCCTGCCCTTGTCTCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp AATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAATCACCAGACGGTGCCGTTGCCTTaGGGGTCCTTCTTATCAGCC +
Preference number: 4 (lower is better)
Translates to: NMGEPPARLSGSPFWNHQTVPLP*GSFLSA
Trigger: GGCTGATAAGAAGGACCCCCAAGGCAACGGCACCGT...CTGGTGATTCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000579158.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp TGTTTCAGAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGAGACCGAGGCATAGCGGCTaGCGAGCTGCTTGCGAAGGT +
Preference number: 4 (lower is better)
Translates to: CFRAASTAWESGGLQPQRPRHSG*RAACEG
Trigger: ACCTTCGCAAGCAGCTCGCCAGCCGCTATGCCTCGG...TCTCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTCTGAAACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp AATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAATCACCAGCGTCTCCAGCCTGTGTaGACTTTCTCCGCGCCTTCT +
Preference number: 4 (lower is better)
Translates to: NMGEPPARLSGSPFWNHQRLQPV*TFSAPS
Trigger: AGAAGGCGCGGAGAAAGTCCACACAGGCTGGAGACG...CTGGTGATTCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000579158.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp ATGGATTTCCAGGGCATGGGCTCCCGACTAGAATCTGCCCCTCGCTCATGCTTCCGCAGCTGCGTGTACTaGCACAGGTGCTGCCGGATC +
Preference number: 4 (lower is better)
Translates to: MDFQGMGSRLESAPRSCFRSCVY*HRCCRI
Trigger: GATCCGGCAGCACCTGTGCCAGTACACGCAGCTGCG...GAAGCATGAGCGAGGGGCAGATTCTAGTCGGGAGCCCATGCCCTGGAAATCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR CCA 90 bp AATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAATCACCAGTCCGGGTCACCCTTCTaGAATCACCAGCTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: NMGEPPARLSGSPFWNHQSGSPF*NHQLSP
Trigger: GGGAGAGAGCTGGTGATTCCAGAAGGGTGACCCGGA...CTGGTGATTCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000323816.8
ENST00000396115.6
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000579158.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp CAGAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGAGACAAGGTCCGGGTCACCCTTCTaGAATCACCAGCTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: QSGKHSMGVRGSSASETRSGSPF*NHQLSP
Trigger: GGGAGAGAGCTGGTGATTCCAGAAGGGTGACCCGGA...CCTTGTCTCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp AGTAAGGGTTTGGTGCAGGGCTCTGGAATGTCCAGAAGGAGCGGGAAGCAAAGGCTGGGCCTGGGAATATaGGGGAGCCCCCAGCTAGGC +
Preference number: 4 (lower is better)
Translates to: SKGLVQGSGMSRRSGKQRLGLGI*GSPQLG
Trigger: GCCTAGCTGGGGGCTCCCCCATATTCCCAGGCCCAG...CCTTTGCTTCCCGCTCCTTCTGGACATTCCAGAGCCCTGCACCAAACCCTTACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp TGTCCAGAAGGAGCGGGAAGCAAAGGTGGCGGGACACTGCCTGAAAGGCGACAACCTCTCCAGGCATGGTaGGTCTGGGAAGACAGGAGC +
Preference number: 4 (lower is better)
Translates to: CPEGAGSKGGGTLPERRQPLQAW*VWEDRS
Trigger: GCTCCTGTCTTCCCAGACCCACCATGCCTGGAGAGG...TTGTCGCCTTTCAGGCAGTGTCCCGCCACCTTTGCTTCCCGCTCCTTCTGGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp TGTTTCAGAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGAGACCCATTAAGAGCCTGTaGTGGGCGGCCCGGGAGAGT +
Preference number: 4 (lower is better)
Translates to: CFRAASTAWESGGLQPQRPIKSL*WAARES
Trigger: ACTCTCCCGGGCCGCCCACCACAGGCTCTTAATGGG...TCTCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTCTGAAACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp GGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGAGACAAGGGCAGGGCAACCTGAGCTACCCTaGAAGACGCAAGAGGGCTCA +
Preference number: 4 (lower is better)
Translates to: GKHSMGVRGSSASETRAGQPELP*KTQEGS
Trigger: TGAGCCCTCTTGCGTCTTCCAGGGTAGCTCAGGTTG...CCCTGCCCTTGTCTCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp GGGGTGGTGCGGGGGCAGGTGGGTTACAGCCTCCACTGGGATCAGGGTTTCAACAGTGACCTCCAAAAATaGACTGGCCCAAACTGGGCC +
Preference number: 4 (lower is better)
Translates to: GVVRGQVGYSLHWDQGFNSDLQK*TGPNWA
Trigger: GGCCCAGTTTGGGCCAGTCCATTTTTGGAGGTCACT...GTTGAAACCCTGATCCCAGTGGAGGCTGTAACCCACCTGCCCCCGCACCACCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp CATCTCACATGTAGGACTGACCCGGCCCCATTAAGAGCCTGTGGTGGGCGGCCCCAAGCTGGAGTGCAGTaGCCCGATCTTGGTTCACTG +
Preference number: 4 (lower is better)
Translates to: HLTCRTDPAPLRACGGRPQAGVQ*PDLGSL
Trigger: CAGTGAACCAAGATCGGGCCACTGCACTCCAGCTTG...GGGCCGCCCACCACAGGCTCTTAATGGGGCCGGGTCAGTCCTACATGTGAGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp GGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGAGACAAGGGCAGGGTGTGCATCAGTCTCCTaGGTGGAGGCAGGTAGAAGG +
Preference number: 4 (lower is better)
Translates to: GKHSMGVRGSSASETRAGCASVS*VEAGRR
Trigger: CCTTCTACCTGCCTCCACCCAGGAGACTGATGCACA...CCCTGCCCTTGTCTCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp ACAGTCCTGAACACCACACGCAATCTCCAAAGGCCATCGCCCCAACCTCACCCCGGCACAGCTGGCATTTaGAGGAGGAGCCTGGGGAAC +
Preference number: 4 (lower is better)
Translates to: TVLNTTRNLQRPSPQPHPGTAGI*RRSLGN
Trigger: GTTCCCCAGGCTCCTCCTCCAAATGCCAGCTGTGCC...GGGGTGAGGTTGGGGCGATGGCCTTTGGAGATTGCGTGTGGTGTTCAGGACTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp AATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAATCACCAGAGCCAGGTGGAAGGATaGCCGTCTGGCTTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: NMGEPPARLSGSPFWNHQSQVEG*PSGFLL
Trigger: GAGAAGAAAGCCAGACGGTCATCCTTCCACCTGGCT...CTGGTGATTCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000396115.6
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000579158.5
ENST00000585266.5
CDS-3UTR TCA 90 bp CAGAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGAGACAAGGAGCCAGGTGGAAGGATaGCCGTCTGGCTTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: QSGKHSMGVRGSSASETRSQVEG*PSGFLL
Trigger: GAGAAGAAAGCCAGACGGTCATCCTTCCACCTGGCT...CCTTGTCTCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000585266.5
CDS-3UTR TCA 90 bp GGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGAGACAAGGGCAGGGCTTTTTGCTTGGCGATaGGGATCCCAGGTTCTGGGA +
Preference number: 4 (lower is better)
Translates to: GKHSMGVRGSSASETRAGLFAWR*GSQVLG
Trigger: TCCCAGAACCTGGGATCCTCATCGCCAAGCAAAAAG...CCCTGCCCTTGTCTCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000585266.5
CDS-3UTR TCA 90 bp AATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAATCACCAGGGCATCGTGTCTGGGTaGGGGAACGTCACACAGTTT +
Preference number: 4 (lower is better)
Translates to: NMGEPPARLSGSPFWNHQGIVSG*GNVTQF
Trigger: AAACTGTGTGACGTTCCCTCACCCAGACACGATGCC...CTGGTGATTCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000579158.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR TCA 90 bp AATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAATCACCAGGGAGCCTTCCTCCTGTaGAGCCAAGGAGTTCTGAGA +
Preference number: 4 (lower is better)
Translates to: NMGEPPARLSGSPFWNHQGAFLL*SQGVLR
Trigger: TCTCAGAACTCCTTGGCTTCACAGGAGGAAGGCTCC...CTGGTGATTCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000579158.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR TCA 90 bp AATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAATCACCAGGCAGAGAACTTGAGGTaGACTTCTGCTTCGTCCGCC +
Preference number: 4 (lower is better)
Translates to: NMGEPPARLSGSPFWNHQAENLR*TSASSA
Trigger: GGCGGACGAAGCAGAAGTTCACCTCAAGTTCTCTGC...CTGGTGATTCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000579158.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR TCA 90 bp TGCTGGCCTCTGAGACGAGCTGGTTTGTTTCCATCCCTGAAGCCTTTGGACGAGCTCTCTGCCGCTCTGTaGGGGCTTTCCGGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: CWPLRRAGLFPSLKPLDELSAAL*GLSGPS
Trigger: AGAAGGCCCGGAAAGCCCTCACAGAGCGGCAGAGAG...CTCGTCCAAAGGCTTCAGGGATGGAAACAAACCAGCTCGTCTCAGAGGCCAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR TCA 90 bp GGGCTCCCGACTAGAATCTGCCCCTCGCTCATGCTTCTCCCGGCCCCTTTAGACTTCTCCGCGCCTTCTTaGTGTCCTCCTCTGTCTTGT +
Preference number: 4 (lower is better)
Translates to: GLPTRICPSLMLLPAPLDFSAPS*CPPLSC
Trigger: ACAAGACAGAGGAGGACATCAAGAAGGCGCGGAGAA...GTCTAAAGGGGCCGGGAGAAGCATGAGCGAGGGGCAGATTCTAGTCGGGAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR TCA 90 bp AATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAATCACCAGACTTTTCGAAGCAGCTaGTCCACGGGCTCGACTGTG +
Preference number: 4 (lower is better)
Translates to: NMGEPPARLSGSPFWNHQTFRSS*STGSTV
Trigger: CACAGTCGAGCCCGTGGATCAGCTGCTTCGAAAAGT...CTGGTGATTCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000323816.8
ENST00000396115.6
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000579158.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR TCA 90 bp AATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAATCACCAGCAGCTTGCTGGCCTCTaGGACGAGCTGGTTTGTTTC +
Preference number: 4 (lower is better)
Translates to: NMGEPPARLSGSPFWNHQQLAGL*DELVCF
Trigger: GAAACAAACCAGCTCGTCTCAGAGGCCAGCAAGCTG...CTGGTGATTCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR TCA 90 bp CATCTCACATGTAGGACTGACCCGGCCCCATTAAGAGCCTGTGGTGGGCGGCCCTCCAGTGCCCACCAGTaGCAGAAAACTGTACAAGGG +
Preference number: 4 (lower is better)
Translates to: HLTCRTDPAPLRACGGRPSSAHQ*QKTVQG
Trigger: CCCTTGTACAGTTTTCTGTCACTGGTGGGCACTGGA...GGGCCGCCCACCACAGGCTCTTAATGGGGCCGGGTCAGTCCTACATGTGAGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR TCA 90 bp GGGGTGGTGCGGGGGCAGGTGGGTTACAGCCTCCACTGGGATCAGGGTTTCAACGTGAGTTGTGCTTGTTaGATTCTGCCCTCACTGCAG +
Preference number: 4 (lower is better)
Translates to: GVVRGQVGYSLHWDQGFNVSCAC*ILPSLQ
Trigger: CTGCAGTGAGGGCAGAATTCAACAAGCACAACTCAC...GTTGAAACCCTGATCCCAGTGGAGGCTGTAACCCACCTGCCCCCGCACCACCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp ACAGTCCTGAACACCACACGCAATCTCCAAAGGCCATCGCCCCAACCTCACCCCATGGTCTCGATCTCCTaGCCTCGTGATCTGCCCACC +
Preference number: 4 (lower is better)
Translates to: TVLNTTRNLQRPSPQPHPMVSIS*PRDLPT
Trigger: GGTGGGCAGATCACGAGGTCAGGAGATCGAGACCAT...GGGGTGAGGTTGGGGCGATGGCCTTTGGAGATTGCGTGTGGTGTTCAGGACTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp GAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGAGACAAGGGCGCCAAAAGGCGAGTGTaGGCCCTAAGAACAGCTTGT +
Preference number: 4 (lower is better)
Translates to: ERQAQHGSQGVFSLRDKGAKRRV*ALRTAC
Trigger: ACAAGCTGTTCTTAGGGCTCACACTCGCCTTTTGGC...GCCCTTGTCTCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp CAGAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGAGACAAGGAGGTTGCAGCAGACGTaGGCAGCAATTGAGCACCCA +
Preference number: 4 (lower is better)
Translates to: QSGKHSMGVRGSSASETRRLQQT*AAIEHP
Trigger: TGGGTGCTCAATTGCTGCTCACGTCTGCTGCAACCT...CCTTGTCTCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp GAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGAGACAAGGGCAGCAGATCTGCTGGCTaGGATGCAAGCTTCAGGTTG +
Preference number: 4 (lower is better)
Translates to: ERQAQHGSQGVFSLRDKGSRSAG*DASFRL
Trigger: CAACCTGAAGCTTGCATCTCAGCCAGCAGATCTGCT...GCCCTTGTCTCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp ATGGATTTCCAGGGCATGGGCTCCCGACTAGAATCTGCCCCTCGCTCATGCTTCACAGGCCAGGCTGTGTaGTCACCAGCTAGGCAAGGC +
Preference number: 4 (lower is better)
Translates to: MDFQGMGSRLESAPRSCFTGQAV*SPARQG
Trigger: GCCTTGCCTAGCTGGTGATCACACAGCCTGGCCTGT...GAAGCATGAGCGAGGGGCAGATTCTAGTCGGGAGCCCATGCCCTGGAAATCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp GATCCTGACACCTGGCTTAGAGACAGAGCCCTCCCTACCCTGATCCTCCAAAGCACAGGCCAGGCTGTGTaGTCACCAGCTAGGCAAGGC +
Preference number: 4 (lower is better)
Translates to: DPDTWLRDRALPTLILQSTGQAV*SPARQG
Trigger: GCCTTGCCTAGCTGGTGATCACACAGCCTGGCCTGT...GCTTTGGAGGATCAGGGTAGGGAGGGCTCTGTCTCTAAGCCAGGTGTCAGGATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp CCGACTAGAATCTGCCCCTCGCTCATGCTTCTCCCGGCCCCTTTAGACTCTTTACCCCCACTTGACAGATaGGTGCACGGAGGTCCCGAC +
Preference number: 4 (lower is better)
Translates to: PTRICPSLMLLPAPLDSLPPLDR*VHGGPD
Trigger: GTCGGGACCTCCGTGCACTCATCTGTCAAGTGGGGG...TAAAGAGTCTAAAGGGGCCGGGAGAAGCATGAGCGAGGGGCAGATTCTAGTCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp GGATCCAGAAATGTCTCTGGTTCGCATAGAGAGGTACCCAACTGGTCTCGGGACCCCGTCTGCTGCAGGTaGTGCTGGAAGGGAAGCGCC +
Preference number: 4 (lower is better)
Translates to: GSRNVSGSHREVPNWSRDPVCCR*CWKGSA
Trigger: GGCGCTTCCCTTCCAGCATCACCTGCAGCAGACGGG...GTCCCGAGACCAGTTGGGTACCTCTCTATGCGAACCAGAGACATTTCTGGATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp TCCAGGGCACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAGAGGCAGCACACACGTaGCCTCCGGGGTTGCGTGAG +
Preference number: 4 (lower is better)
Translates to: SRAQACDSDPYKTRQGPQEAAHT*PPGLRE
Trigger: CTCACGCAACCCCGGAGGTCACGTGTGTGCTGCCTC...TTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTGCCCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000542249.5
CDS-3UTR GCA 90 bp TCCAGGGCACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAGCAGTCTCTGGAGGGTaGGCTGGGGTCCCTGATGCG +
Preference number: 4 (lower is better)
Translates to: SRAQACDSDPYKTRQGPQAVSGG*AGVPDA
Trigger: CGCATCAGGGACCCCAGCGCACCCTCCAGAGACTGC...TTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTGCCCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000585266.5
CDS-3UTR GCA 90 bp TGTTTCAGAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGAGAGGCTGGCGAGCTGCTTaGGAAGGTCGGCAATGTGGT +
Preference number: 4 (lower is better)
Translates to: CFRAASTAWESGGLQPQRGWRAA*EGRQCG
Trigger: ACCACATTGCCGACCTTCGCAAGCAGCTCGCCAGCC...TCTCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTCTGAAACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp AATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAATCACCAGATCTCCAGGTCTCTCTaGCGCTCTGTGAGGGCTTTC +
Preference number: 4 (lower is better)
Translates to: NMGEPPARLSGSPFWNHQISRSL*RSVRAF
Trigger: GAAAGCCCTCACAGAGCGGCAGAGAGACCTGGAGAT...CTGGTGATTCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000579158.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp AATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAATCACCAGTACTGGCACAGGTGCTaGCGGATCATCTCTACCCTC +
Preference number: 4 (lower is better)
Translates to: NMGEPPARLSGSPFWNHQYWHRC*RIISTL
Trigger: GAGGGTAGAGATGATCCGGCAGCACCTGTGCCAGTA...CTGGTGATTCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000323816.8
ENST00000396115.6
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000579158.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp AATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAATCACCAGGTGTACTGGCACAGGTaGTGCCGGATCATCTCTACC +
Preference number: 4 (lower is better)
Translates to: NMGEPPARLSGSPFWNHQVYWHR*CRIIST
Trigger: GGTAGAGATGATCCGGCAGCACCTGTGCCAGTACAC...CTGGTGATTCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000323816.8
ENST00000396115.6
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000579158.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp GTGGGTCTGTCTTCTGGGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCAACATGTCTGTTTCATaGCGCAGCTGCGTGTACTGG +
Preference number: 4 (lower is better)
Translates to: VGLSSGPGNMGEPPARLSNMSVS*RSCVYW
Trigger: CCAGTACACGCAGCTGCGGCATGAAACAGACATGTT...GGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCCCAGAAGACAGACCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000396115.6
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp AATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAATCACCAGATGTTGCCCGTCTTGTaGTCTCTGACCCACAGCTCC +
Preference number: 4 (lower is better)
Translates to: NMGEPPARLSGSPFWNHQMLPVL*SLTHSS
Trigger: GGAGCTGTGGGTCAGAGAGCACAAGACGGGCAACAT...CTGGTGATTCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000323816.8
ENST00000396115.6
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000579158.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp GGGGTGGTGCGGGGGCAGGTGGGTTACAGCCTCCACTGGGATCAGGGTTTCAACGGGATGGCAAAGACTTaGCCTAACCCATCTCACATG +
Preference number: 4 (lower is better)
Translates to: GVVRGQVGYSLHWDQGFNGMAKT*PNPSHM
Trigger: CATGTGAGATGGGTTAGGGCAAGTCTTTGCCATCCC...GTTGAAACCCTGATCCCAGTGGAGGCTGTAACCCACCTGCCCCCGCACCACCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp GGGGTGGTGCGGGGGCAGGTGGGTTACAGCCTCCACTGGGATCAGGGTTTCAACCAAGTAAGGGTTTGGTaGAGGGCTCTGGAATGTCCA +
Preference number: 4 (lower is better)
Translates to: GVVRGQVGYSLHWDQGFNQVRVW*RALECP
Trigger: TGGACATTCCAGAGCCCTGCACCAAACCCTTACTTG...GTTGAAACCCTGATCCCAGTGGAGGCTGTAACCCACCTGCCCCCGCACCACCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp TCTGGGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCAGCTGGAAGTGGTCGTaGAAACAAGTTGAAGACCCT +
Preference number: 4 (lower is better)
Translates to: SGPGNMGEPPARLSGSPFSWKWS*KQVEDP
Trigger: AGGGTCTTCAACTTGTTTGCACGACCACTTCCAGCT...GAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCCCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp GGGGTGGTGCGGGGGCAGGTGGGTTACAGCCTCCACTGGGATCAGGGTTTCAACAGAAGGGAGCAGATCTaGTGGCTGAGATGCAAGCTT +
Preference number: 4 (lower is better)
Translates to: GVVRGQVGYSLHWDQGFNRREQI*WLRCKL
Trigger: AAGCTTGCATCTCAGCCAGCAGATCTGCTCCCTTCT...GTTGAAACCCTGATCCCAGTGGAGGCTGTAACCCACCTGCCCCCGCACCACCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp CAGAAACGGGCCCCTGTTCATACGGATAGGGGTTCTGGACTGTTGACTCTAGCCCTGGGTCCACACAGCTaGCTGGAACCCACGACTCCC +
Preference number: 4 (lower is better)
Translates to: QKRAPVHTDRGSGLLTLALGPHS*LEPTTP
Trigger: GGGAGTCGTGGGTTCCAGGCAGCTGTGTGGACCCAG...GGCTAGAGTCAACAGTCCAGAACCCCTATCCGTATGAACAGGGGCCCGTTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp TCTGGGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCCACTTTCATAGGGTTTaGCGATGTGCTCGTGTCTGT +
Preference number: 4 (lower is better)
Translates to: SGPGNMGEPPARLSGSPFHFHRV*RCARVC
Trigger: ACAGACACGAGCACATCGGCAAACCCTATGAAAGTG...GAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCCCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp AATTCTGCCCTCACTGCAGATGTGCAGGTCAAACCCAAAGTGGTCAATGGGAAAGCGCCGTCTCTGGGGTaGGCGGGGGTCCTCAGGCAG +
Preference number: 4 (lower is better)
Translates to: NSALTADVQVKPKVVNGKAPSLG*AGVLRQ
Trigger: CTGCCTGAGGACCCCCGCGCACCCCAGAGACGGCGC...TTTCCCATTGACCACTTTGGGTTTGACCTGCACATCTGCAGTGAGGGCAGAATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432992.7
CDS-3UTR CCA 90 bp AATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAATCACCAGTGGGACGTTCCCAGGTaGTCTCATTGGTGGTCGTGT +
Preference number: 4 (lower is better)
Translates to: NMGEPPARLSGSPFWNHQWDVPR*SHWWSC
Trigger: ACACGACCACCAATGAGACCACCTGGGAACGTCCCA...CTGGTGATTCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000396115.6
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000579158.5
ENST00000585266.5
CDS-3UTR CCA 90 bp GTGGGTCTGTCTTCTGGGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCGTATCCATTCACTGTTaGAGGCAGAGAGCTCCTGTG +
Preference number: 4 (lower is better)
Translates to: VGLSSGPGNMGEPPARLSVSIHC*RQRAPV
Trigger: CACAGGAGCTCTCTGCCTCCAACAGTGAATGGATAC...GGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCCCAGAAGACAGACCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000396115.6
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000585266.5
CDS-3UTR CCA 90 bp AATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAATCACCAGTTTCGGACACTCATGTaGGCAGTCTCTGGAGGGTGC +
Preference number: 4 (lower is better)
Translates to: NMGEPPARLSGSPFWNHQFRTLM*AVSGGC
Trigger: GCACCCTCCAGAGACTGCCCACATGAGTGTCCGAAA...CTGGTGATTCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000396115.6
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000579158.5
ENST00000585266.5
CDS-3UTR CCA 90 bp TCTGGGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTCTGGGAATCACCGGTaGATTTTCGGACACTCATGT +
Preference number: 4 (lower is better)
Translates to: SGPGNMGEPPARLSGSPFSGNHR*IFGHSC
Trigger: ACATGAGTGTCCGAAAATCCACCGGTGATTCCCAGA...GAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCCCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000396115.6
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000585266.5
CDS-3UTR CCA 90 bp AATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAATCACCAGTTCCGGCATCGTGTCTaGGTGAGGGAACGTCACACA +
Preference number: 4 (lower is better)
Translates to: NMGEPPARLSGSPFWNHQFRHRV*VRERHT
Trigger: TGTGTGACGTTCCCTCACCCAGACACGATGCCGGAA...CTGGTGATTCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000579158.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp GAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGAGACAAGGGCGTAGCTCCACTCGGTTaGTTTCAGCAGCTGCTGTTC +
Preference number: 4 (lower is better)
Translates to: ERQAQHGSQGVFSLRDKGVAPLG*FQQLLF
Trigger: GAACAGCAGCTGCTGAAACCAACCGAGTGGAGCTAC...GCCCTTGTCTCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp TGTCCAGAAGGAGCGGGAAGCAAAGGTGGCGGGACACTGCCTGAAAGGCGACAAACGGTGCCGTTGCCTTaGGGGTCCTTCTTATCAGCC +
Preference number: 4 (lower is better)
Translates to: CPEGAGSKGGGTLPERRQTVPLP*GSFLSA
Trigger: GGCTGATAAGAAGGACCCCCAAGGCAACGGCACCGT...TTGTCGCCTTTCAGGCAGTGTCCCGCCACCTTTGCTTCCCGCTCCTTCTGGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp AGGGTTTGCCGATGTGCTCGTGTCTGTGAAGGGGTTGCTTCCGGTCATCTCCTTCCGAGGCATAGCGGCTaGCGAGCTGCTTGCGAAGGT +
Preference number: 4 (lower is better)
Translates to: RVCRCARVCEGVASGHLLPRHSG*RAACEG
Trigger: ACCTTCGCAAGCAGCTCGCCAGCCGCTATGCCTCGG...AAGGAGATGACCGGAAGCAACCCCTTCACAGACACGAGCACATCGGCAAACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp GGGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGGGCTCGACTGTGCTTTaGTTGAACATGTCTGTTTCA +
Preference number: 4 (lower is better)
Translates to: GPGNMGEPPARLSGSPFWGSTVL*LNMSVS
Trigger: TGAAACAGACATGTTCAACCAAAGCACAGTCGAGCC...CCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000396115.6
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp GGATTTCCAGGGCATGGGCTCCCGACTAGAATCTGCCCCTCGCTCATGCTTCTCTCCGGGTCACCCTTCTaGAATCACCAGCTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: GFPGHGLPTRICPSLMLLSGSPF*NHQLSP
Trigger: GGGAGAGAGCTGGTGATTCCAGAAGGGTGACCCGGA...GAGAAGCATGAGCGAGGGGCAGATTCTAGTCGGGAGCCCATGCCCTGGAAATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR CCA 90 bp CATGATTCTGATCCTGACACCTGGCTTAGAGACAGAGCCCTCCCTACCCTGATCCTGGGCCTGGGAATATaGGGGAGCCCCCAGCTAGGC +
Preference number: 4 (lower is better)
Translates to: HDSDPDTWLRDRALPTLILGLGI*GSPQLG
Trigger: GCCTAGCTGGGGGCTCCCCCATATTCCCAGGCCCAG...GATCAGGGTAGGGAGGGCTCTGTCTCTAAGCCAGGTGTCAGGATCAGAATCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp AATGTCCAGAAGGAGCGGGAAGCAAAGGTGGCGGGACACTGCCTGAAAGGCGACGATCCTCCAAAGCCCTaGAGACAAGGGAGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: NVQKEREAKVAGHCLKGDDPPKP*RQGSQL
Trigger: CAGCTGGCTCCCTTGTCTCCAGGGCTTTGGAGGATC...GTCGCCTTTCAGGCAGTGTCCCGCCACCTTTGCTTCCCGCTCCTTCTGGACATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp GGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGAGACAAGGGCAGGGCAGCTGGGGGAAGGATaGATTGGCATTTCCAGAGGA +
Preference number: 4 (lower is better)
Translates to: GKHSMGVRGSSASETRAGQLGEG*IGISRG
Trigger: TCCTCTGGAAATGCCAATCCATCCTTCCCCCAGCTG...CCCTGCCCTTGTCTCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp GCACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCGTGCACAGGGCACCGTaGCGGACAGGCCCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: AQACDSDPYKTRQGPQSSVHRAP*RTGPSL
Trigger: CAAGCTGGGGCCTGTCCGCCACGGTGCCCTGTGCAC...GGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp GGGGTGGTGCGGGGGCAGGTGGGTTACAGCCTCCACTGGGATCAGGGTTTCAACCAGATCTGGACAGAGTaGTTCTCCATCCCATGGACA +
Preference number: 4 (lower is better)
Translates to: GVVRGQVGYSLHWDQGFNQIWTE*FSIPWT
Trigger: TGTCCATGGGATGGAGAACCACTCTGTCCAGATCTG...GTTGAAACCCTGATCCCAGTGGAGGCTGTAACCCACCTGCCCCCGCACCACCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp GAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGAGACAAGGGCAGCCTGCCGAATAGTTaGGACTACAGGTGTGCACCA +
Preference number: 4 (lower is better)
Translates to: ERQAQHGSQGVFSLRDKGSLPNS*DYRCAP
Trigger: TGGTGCACACCTGTAGTCCCAACTATTCGGCAGGCT...GCCCTTGTCTCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp ATGGATTTCCAGGGCATGGGCTCCCGACTAGAATCTGCCCCTCGCTCATGCTTCGGCACAGCTGGCATTTaGAGGAGGAGCCTGGGGAAC +
Preference number: 4 (lower is better)
Translates to: MDFQGMGSRLESAPRSCFGTAGI*RRSLGN
Trigger: GTTCCCCAGGCTCCTCCTCCAAATGCCAGCTGTGCC...GAAGCATGAGCGAGGGGCAGATTCTAGTCGGGAGCCCATGCCCTGGAAATCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp ACAGTCCTGAACACCACACGCAATCTCCAAAGGCCATCGCCCCAACCTCACCCCTCTTCACGCCTGTCCTaGCTCCTGGGGAGTAGACTC +
Preference number: 4 (lower is better)
Translates to: TVLNTTRNLQRPSPQPHPSSRLS*LLGSRL
Trigger: GAGTCTACTCCCCAGGAGCCAGGACAGGCGTGAAGA...GGGGTGAGGTTGGGGCGATGGCCTTTGGAGATTGCGTGTGGTGTTCAGGACTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp ACAGTCCTGAACACCACACGCAATCTCCAAAGGCCATCGCCCCAACCTCACCCCTGTACCACCATCCAGTaGGGTGCAGGTACAGGCCAG +
Preference number: 4 (lower is better)
Translates to: TVLNTTRNLQRPSPQPHPCTTIQ*GAGTGQ
Trigger: CTGGCCTGTACCTGCACCCCACTGGATGGTGGTACA...GGGGTGAGGTTGGGGCGATGGCCTTTGGAGATTGCGTGTGGTGTTCAGGACTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp AATGTCCAGAAGGAGCGGGAAGCAAAGGTGGCGGGACACTGCCTGAAAGGCGACGGCCTTAACTGGGTGTaGTCCTGTCCCTGCCACCAT +
Preference number: 4 (lower is better)
Translates to: NVQKEREAKVAGHCLKGDGLNWV*SCPCHH
Trigger: ATGGTGGCAGGGACAGGACCACACCCAGTTAAGGCC...GTCGCCTTTCAGGCAGTGTCCCGCCACCTTTGCTTCCCGCTCCTTCTGGACATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp GATCCTGACACCTGGCTTAGAGACAGAGCCCTCCCTACCCTGATCCTCCAAAGCAACCCAGCAGAGTCCTaGCAGCCTCTTCGGCTCCCT +
Preference number: 4 (lower is better)
Translates to: DPDTWLRDRALPTLILQSNPAES*QPLRLP
Trigger: AGGGAGCCGAAGAGGCTGCCAGGACTCTGCTGGGTT...GCTTTGGAGGATCAGGGTAGGGAGGGCTCTGTCTCTAAGCCAGGTGTCAGGATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp TGCTGGCCTCTGAGACGAGCTGGTTTGTTTCCATCCCTGAAGCCTTTGGACGAGCGGGGTGAGGAGTGCTaGCGGGAGACACGGCTCTTT +
Preference number: 4 (lower is better)
Translates to: CWPLRRAGLFPSLKPLDERGEEC*RETRLF
Trigger: AAAGAGCCGTGTCTCCCGCCAGCACTCCTCACCCCG...CTCGTCCAAAGGCTTCAGGGATGGAAACAAACCAGCTCGTCTCAGAGGCCAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp GTGGGTCTGTCTTCTGGGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCGCTGGTGTTAATGGGTaGTCGTCAGACACTCGCTTT +
Preference number: 4 (lower is better)
Translates to: VGLSSGPGNMGEPPARLSAGVNG*SSDTRF
Trigger: AAAGCGAGTGTCTGACGACCACCCATTAACACCAGC...GGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCCCAGAAGACAGACCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000396115.6
ENST00000437099.6
CDS-3UTR CCA 90 bp GATCCTGACACCTGGCTTAGAGACAGAGCCCTCCCTACCCTGATCCTCCAAAGCGAAGCAGAGACTCGTTaGCTTCGCAGAGCGAGCGGC +
Preference number: 4 (lower is better)
Translates to: DPDTWLRDRALPTLILQSEAETR*LRRASG
Trigger: GCCGCTCGCTCTGCGAAGCCAACGAGTCTCTGCTTC...GCTTTGGAGGATCAGGGTAGGGAGGGCTCTGTCTCTAAGCCAGGTGTCAGGATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432992.7
CDS-3UTR TCA 90 bp AATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAATCACCAGCTTTTTGCTTGGCGATaGGGATCCCAGGTTCTGGGA +
Preference number: 4 (lower is better)
Translates to: NMGEPPARLSGSPFWNHQLFAWR*GSQVLG
Trigger: TCCCAGAACCTGGGATCCTCATCGCCAAGCAAAAAG...CTGGTGATTCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000396115.6
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000579158.5
ENST00000585266.5
CDS-3UTR TCA 90 bp ACAGTCCTGAACACCACACGCAATCTCCAAAGGCCATCGCCCCAACCTCACCCCGGCATCGTGTCTGGGTaGGGGAACGTCACACAGTTT +
Preference number: 4 (lower is better)
Translates to: TVLNTTRNLQRPSPQPHPGIVSG*GNVTQF
Trigger: AAACTGTGTGACGTTCCCTCACCCAGACACGATGCC...GGGGTGAGGTTGGGGCGATGGCCTTTGGAGATTGCGTGTGGTGTTCAGGACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp GTGGAGGAAACACATTCATACCGGGGTGAGGAGTGCTGGCGGGAGACACGGCTCTCTTGTTGCTCAGCTTaGTCTCCAGCTGCTGGGTCT +
Preference number: 4 (lower is better)
Translates to: VEETHSYRGEECWRETRLSCCSA*SPAAGS
Trigger: AGACCCAGCAGCTGGAGATCAAGCTGAGCAACAAGA...GAGCCGTGTCTCCCGCCAGCACTCCTCACCCCGGTATGAATGTGTTTCCTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp AATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAATCACCAGTCTTGTTGCTCAGCTTaGTCTCCAGCTGCTGGGTCT +
Preference number: 4 (lower is better)
Translates to: NMGEPPARLSGSPFWNHQSCCSA*SPAAGS
Trigger: AGACCCAGCAGCTGGAGATCAAGCTGAGCAACAAGA...CTGGTGATTCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000579158.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR TCA 90 bp AATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAATCACCAGTTCTCCGCGCCTTCTTaGTGTCCTCCTCTGTCTTGT +
Preference number: 4 (lower is better)
Translates to: NMGEPPARLSGSPFWNHQFSAPS*CPPLSC
Trigger: ACAAGACAGAGGAGGACATCAAGAAGGCGCGGAGAA...CTGGTGATTCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000579158.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR TCA 90 bp GCTTCCAGGGCACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCAGATCCACACAGCGCATaGGGTCGTCTCCAGCCTGTG +
Preference number: 4 (lower is better)
Translates to: ASRAQACDSDPYKTRQGPDPHSA*GRLQPV
Trigger: CACAGGCTGGAGACGACCTCATGCGCTGTGTGGATC...TGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTGCCCTGGAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR TCA 90 bp CGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAAGCACAGCGATCCACACAGCGCATaGGGTCGTCTCCAGCCTGTG +
Preference number: 4 (lower is better)
Translates to: RQGPQSSSLCLFQSGKHSDPHSA*GRLQPV
Trigger: CACAGGCTGGAGACGACCTCATGCGCTGTGTGGATC...GCTGTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR TCA 90 bp CTGTTTGTTTCAGAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCCCGTCTTGTGCTCTCTaGCCCACAGCTCCCTGTCTT +
Preference number: 4 (lower is better)
Translates to: LFVSERQAQHGSQGVFSLPSCAL*PTAPCL
Trigger: AAGACAGGGAGCTGTGGGTCAGAGAGCACAAGACGG...GAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTCTGAAACAAACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR TCA 90 bp ATGGATTTCCAGGGCATGGGCTCCCGACTAGAATCTGCCCCTCGCTCATGCTTCCCGTCTTGTGCTCTCTaGCCCACAGCTCCCTGTCTT +
Preference number: 4 (lower is better)
Translates to: MDFQGMGSRLESAPRSCFPSCAL*PTAPCL
Trigger: AAGACAGGGAGCTGTGGGTCAGAGAGCACAAGACGG...GAAGCATGAGCGAGGGGCAGATTCTAGTCGGGAGCCCATGCCCTGGAAATCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR TCA 90 bp TGTTTCAGAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGAGACCGTCTTGTGCTCTCTaGCCCACAGCTCCCTGTCTT +
Preference number: 4 (lower is better)
Translates to: CFRAASTAWESGGLQPQRPSCAL*PTAPCL
Trigger: AAGACAGGGAGCTGTGGGTCAGAGAGCACAAGACGG...TCTCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTCTGAAACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR TCA 90 bp GGGCTCCCGACTAGAATCTGCCCCTCGCTCATGCTTCTCCCGGCCCCTTTAGACGTGAGTTGTGCTTGTTaGATTCTGCCCTCACTGCAG +
Preference number: 4 (lower is better)
Translates to: GLPTRICPSLMLLPAPLDVSCAC*ILPSLQ
Trigger: CTGCAGTGAGGGCAGAATTCAACAAGCACAACTCAC...GTCTAAAGGGGCCGGGAGAAGCATGAGCGAGGGGCAGATTCTAGTCGGGAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR TCA 90 bp AATGTCCAGAAGGAGCGGGAAGCAAAGGTGGCGGGACACTGCCTGAAAGGCGACGATCACGGGCTTCCCTaGCGACAGGGCCATTATAGT +
Preference number: 4 (lower is better)
Translates to: NVQKEREAKVAGHCLKGDDHGLP*RQGHYS
Trigger: ACTATAATGGCCCTGTCGTCAGGGAAGCCCGTGATC...GTCGCCTTTCAGGCAGTGTCCCGCCACCTTTGCTTCCCGCTCCTTCTGGACATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp ATGGATTTCCAGGGCATGGGCTCCCGACTAGAATCTGCCCCTCGCTCATGCTTCATGGTCTCGATCTCCTaGCCTCGTGATCTGCCCACC +
Preference number: 4 (lower is better)
Translates to: MDFQGMGSRLESAPRSCFMVSIS*PRDLPT
Trigger: GGTGGGCAGATCACGAGGTCAGGAGATCGAGACCAT...GAAGCATGAGCGAGGGGCAGATTCTAGTCGGGAGCCCATGCCCTGGAAATCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp GCACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCCCAGGGTGGTCCCACTaGCAGAATCTCAGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: AQACDSDPYKTRQGPQSSPGWSH*QNLRAA
Trigger: GGCGGCCCTGAGATTCTGTCAGTGGGACCACCCTGG...GGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp GGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGAGACAAGGGCAGGGAGTACGCCCATGCAATaGAATACTTCCCGGCAAGGA +
Preference number: 4 (lower is better)
Translates to: GKHSMGVRGSSASETRAGSTPMQ*NTSRQG
Trigger: TCCTTGCCGGGAAGTATTTCATTGCATGGGCGTACT...CCCTGCCCTTGTCTCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp GTGGAGGAAACACATTCATACCGGGGTGAGGAGTGCTGGCGGGAGACACGGCTCCAGTTGCCGGTGGCCTaGGACACTCATCTAGAACAA +
Preference number: 4 (lower is better)
Translates to: VEETHSYRGEECWRETRLQLPVA*DTHLEQ
Trigger: TTGTTCTAGATGAGTGTCTCAGGCCACCGGCAACTG...GAGCCGTGTCTCCCGCCAGCACTCCTCACCCCGGTATGAATGTGTTTCCTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp AATGTCCAGAAGGAGCGGGAAGCAAAGGTGGCGGGACACTGCCTGAAAGGCGACGGACTCACCTTTCACTaGGCAGGGGGCATGAACAAG +
Preference number: 4 (lower is better)
Translates to: NVQKEREAKVAGHCLKGDGLTFH*AGGMNK
Trigger: CTTGTTCATGCCCCCTGCTCAGTGAAAGGTGAGTCC...GTCGCCTTTCAGGCAGTGTCCCGCCACCTTTGCTTCCCGCTCCTTCTGGACATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp ACAGTCCTGAACACCACACGCAATCTCCAAAGGCCATCGCCCCAACCTCACCCCGGACTCACCTTTCACTaGGCAGGGGGCATGAACAAG +
Preference number: 4 (lower is better)
Translates to: TVLNTTRNLQRPSPQPHPGLTFH*AGGMNK
Trigger: CTTGTTCATGCCCCCTGCTCAGTGAAAGGTGAGTCC...GGGGTGAGGTTGGGGCGATGGCCTTTGGAGATTGCGTGTGGTGTTCAGGACTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp GCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCCCCCCACTTGACAGATaGGTGCACGGAGGTCCCGAC +
Preference number: 4 (lower is better)
Translates to: ACDSDPYKTRQGPQSSSLPPLDR*VHGGPD
Trigger: GTCGGGACCTCCGTGCACTCATCTGTCAAGTGGGGG...GAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp CGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAAGCACAGCTGGCTGGCGTCCCTTTaGATGTCTGTCCCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: RQGPQSSSLCLFQSGKHSWLASL*MSVPGS
Trigger: GGACCCAGGGACAGACATTCAAAGGGACGCCAGCCA...GCTGTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp AGGGTTTGCCGATGTGCTCGTGTCTGTGAAGGGGTTGCTTCCGGTCATCTCCTTACATTCATACCGGGGTaGGGAGTGCTGGCGGGAGAC +
Preference number: 4 (lower is better)
Translates to: RVCRCARVCEGVASGHLLTFIPG*GVLAGD
Trigger: GTCTCCCGCCAGCACTCCTCACCCCGGTATGAATGT...AAGGAGATGACCGGAAGCAACCCCTTCACAGACACGAGCACATCGGCAAACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp AATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAATCACCAGCGTGAGCATGAGCAGTaGGAAGCACCTGAGCATTCA +
Preference number: 4 (lower is better)
Translates to: NMGEPPARLSGSPFWNHQREHEQ*EAPEHS
Trigger: TGAATGCTCAGGTGCTTCTCACTGCTCATGCTCACG...CTGGTGATTCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000542249.5
CDS-3UTR TCA 90 bp CAAAGACTTGCCCTAACCCATCTCACATGTAGGACTGACCCGGCCCCATTAAGACCCATTCAGGTTCCCTaGGGGTGGAGGCGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: QRLALTHLTCRTDPAPLRPIQVP*GWRRWG
Trigger: TCCCCAGCGCCTCCACCCTCAGGGAACCTGAATGGG...TCTTAATGGGGCCGGGTCAGTCCTACATGTGAGATGGGTTAGGGCAAGTCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000580865.5
CDS-3UTR GCA 90 bp ATGGATTTCCAGGGCATGGGCTCCCGACTAGAATCTGCCCCTCGCTCATGCTTCCACCGAGTGATCCTCTaGCTGCTTCTCACTCCAGGG +
Preference number: 4 (lower is better)
Translates to: MDFQGMGSRLESAPRSCFHRVIL*LLLTPG
Trigger: CCCTGGAGTGAGAAGCAGGCAGAGGATCACTCGGTG...GAAGCATGAGCGAGGGGCAGATTCTAGTCGGGAGCCCATGCCCTGGAAATCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323816.8
CDS-3UTR GCA 90 bp GAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGAGACAAGGGCCTTCATGGCTCGTCTTaGGTTCAATCTTGGGGAGAC +
Preference number: 4 (lower is better)
Translates to: ERQAQHGSQGVFSLRDKGLHGSS*VQSWGD
Trigger: GTCTCCCCAAGATTGAACGCAAGACGAGCCATGAAG...GCCCTTGTCTCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000323816.8
CDS-3UTR GCA 90 bp GGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAGTGTTTTCCTTGCTCTaGTTTTTGCTTGGCGATGAG +
Preference number: 4 (lower is better)
Translates to: GLGIWGSPQLGCPGHPSGVFSLL*FLLGDE
Trigger: CTCATCGCCAAGCAAAAAGCAGAGCAAGGAAAACAC...TCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000396115.6
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp TCTGGGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCGTGTTTTCCTTGCTCTaGTTTTTGCTTGGCGATGAG +
Preference number: 4 (lower is better)
Translates to: SGPGNMGEPPARLSGSPFVFSLL*FLLGDE
Trigger: CTCATCGCCAAGCAAAAAGCAGAGCAAGGAAAACAC...GAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCCCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000396115.6
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp AATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAATCACCAGGTTGGTTTCAGCAGCTaGTGTTCCGGCATCGTGTCT +
Preference number: 4 (lower is better)
Translates to: NMGEPPARLSGSPFWNHQVGFSS*CSGIVS
Trigger: AGACACGATGCCGGAACAGCAGCTGCTGAAACCAAC...CTGGTGATTCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000579158.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp AAGGTGGCGGGACACTGCCTGAAAGGCGACAACCTAGTGTGGCCACAAGAGAGTCAGCCACGGTGCCGTTaGCTTGGGGGTCCTTCTTAT +
Preference number: 4 (lower is better)
Translates to: KVAGHCLKGDNLVWPQESQPRCR*LGGPSY
Trigger: ATAAGAAGGACCCCCAAGGCAACGGCACCGTGGCTG...ACTCTCTTGTGGCCACACTAGGTTGTCGCCTTTCAGGCAGTGTCCCGCCACCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp GCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCCAAACCCAGCCACGGTaGCGTTGCCTTGGGGGTCCT +
Preference number: 4 (lower is better)
Translates to: ACDSDPYKTRQGPQSSSLQTQPR*RCLGGP
Trigger: AGGACCCCCAAGGCAACGGCACCGTGGCTGGGTTTG...GAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp AATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAATCACCAGCTTGAGGTGAACTTCTaGTTCGTCCGCCAGGCTCTT +
Preference number: 4 (lower is better)
Translates to: NMGEPPARLSGSPFWNHQLEVNF*FVRQAL
Trigger: AAGAGCCTGGCGGACGAAGCAGAAGTTCACCTCAAG...CTGGTGATTCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000579158.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp TGCTGGCCTCTGAGACGAGCTGGTTTGTTTCCATCCCTGAAGCCTTTGGACGAGGGCTGGCGAGCTGCTTaGGAAGGTCGGCAATGTGGT +
Preference number: 4 (lower is better)
Translates to: CWPLRRAGLFPSLKPLDEGWRAA*EGRQCG
Trigger: ACCACATTGCCGACCTTCGCAAGCAGCTCGCCAGCC...CTCGTCCAAAGGCTTCAGGGATGGAAACAAACCAGCTCGTCTCAGAGGCCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp CGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAAGCACAGCGGCTGGCGAGCTGCTTaGGAAGGTCGGCAATGTGGT +
Preference number: 4 (lower is better)
Translates to: RQGPQSSSLCLFQSGKHSGWRAA*EGRQCG
Trigger: ACCACATTGCCGACCTTCGCAAGCAGCTCGCCAGCC...GCTGTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp AATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAATCACCAGAGCTTGATCTCCAGCTaGTGGGTCTTCATCTCCAGG +
Preference number: 4 (lower is better)
Translates to: NMGEPPARLSGSPFWNHQSLISS*WVFISR
Trigger: CCTGGAGATGAAGACCCAGCAGCTGGAGATCAAGCT...CTGGTGATTCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000579158.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp ATGGATTTCCAGGGCATGGGCTCCCGACTAGAATCTGCCCCTCGCTCATGCTTCGTTTCATGCCGCAGCTaGGTGTACTGGCACAGGTGC +
Preference number: 4 (lower is better)
Translates to: MDFQGMGSRLESAPRSCFVSCRS*VYWHRC
Trigger: GCACCTGTGCCAGTACACGCAGCTGCGGCATGAAAC...GAAGCATGAGCGAGGGGCAGATTCTAGTCGGGAGCCCATGCCCTGGAAATCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR GCA 90 bp GGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGAGACAAGGGCAGGGAACATGTCTGTTTCATaGCGCAGCTGCGTGTACTGG +
Preference number: 4 (lower is better)
Translates to: GKHSMGVRGSSASETRAGNMSVS*RSCVYW
Trigger: CCAGTACACGCAGCTGCGGCATGAAACAGACATGTT...CCCTGCCCTTGTCTCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp CATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTAGGGCAGCCCAAAGGTaGACAGGGCACCGTGGCGGA +
Preference number: 4 (lower is better)
Translates to: HVTVTPTKLGKDHKVPASRAAQR*TGHRGG
Trigger: TCCGCCACGGTGCCCTGTGCACCTTTGGGCTGCCCT...AGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp CAAAGACTTGCCCTAACCCATCTCACATGTAGGACTGACCCGGCCCCATTAAGAAGGGCAGCCCAAAGGTaGACAGGGCACCGTGGCGGA +
Preference number: 4 (lower is better)
Translates to: QRLALTHLTCRTDPAPLRRAAQR*TGHRGG
Trigger: TCCGCCACGGTGCCCTGTGCACCTTTGGGCTGCCCT...TCTTAATGGGGCCGGGTCAGTCCTACATGTGAGATGGGTTAGGGCAAGTCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp AATGTCCAGAAGGAGCGGGAAGCAAAGGTGGCGGGACACTGCCTGAAAGGCGACCAAGAGAGTCTGCTATaGCTGTCCAGTGCCCACCAG +
Preference number: 4 (lower is better)
Translates to: NVQKEREAKVAGHCLKGDQESLL*LSSAHQ
Trigger: CTGGTGGGCACTGGACAGGCATAGCAGACTCTCTTG...GTCGCCTTTCAGGCAGTGTCCCGCCACCTTTGCTTCCCGCTCCTTCTGGACATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp AATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAATCACCAGCCCTCACTGCAGATGTaGAGGTCAAACCCAAAGTGG +
Preference number: 4 (lower is better)
Translates to: NMGEPPARLSGSPFWNHQPSLQM*RSNPKW
Trigger: CCACTTTGGGTTTGACCTGCACATCTGCAGTGAGGG...CTGGTGATTCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR GCA 90 bp TGTTTCAGAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGAGAGTGTGGTCCTGTCCCTaGCACCATGTACCACCATCC +
Preference number: 4 (lower is better)
Translates to: CFRAASTAWESGGLQPQRVWSCP*HHVPPS
Trigger: GGATGGTGGTACATGGTGGCAGGGACAGGACCACAC...TCTCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTCTGAAACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp TCTGGGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCATTCTCGCTCTAACCTaGTGCAATGGGAATTGCTTC +
Preference number: 4 (lower is better)
Translates to: SGPGNMGEPPARLSGSPFILALT*CNGNCF
Trigger: GAAGCAATTCCCATTGCAGCAGGTTAGAGCGAGAAT...GAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCCCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp AGGGCACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTACCGGGGTGAGGAGTaGTGGCGGGAGACACGGCTC +
Preference number: 4 (lower is better)
Translates to: RAQACDSDPYKTRQGPQSYRGEE*WRETRL
Trigger: GAGCCGTGTCTCCCGCCAGCACTCCTCACCCCGGTA...ACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp GCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAAGCACAGCATGTTCACAGCGCAGCCTaGATTCCCGCCGAGCCCCAC +
Preference number: 4 (lower is better)
Translates to: ARTTKFQPLFVSERQAQHVHSAA*IPAEPH
Trigger: GTGGGGCTCGGCGGGAATGCAGGCTGCGCTGTGAAC...ATGCTGTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432992.7
CDS-3UTR CCA 90 bp GGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGAGACAAGGGCAGGGTCTTGCGTTCAATCTTaGGGAGACCGAGGTGACACA +
Preference number: 4 (lower is better)
Translates to: GKHSMGVRGSSASETRAGSCVQS*GDRGDT
Trigger: TGTGTCACCTCGGTCTCCCCAAGATTGAACGCAAGA...CCCTGCCCTTGTCTCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000323816.8
CDS-3UTR CCA 90 bp CAGAAACGGGCCCCTGTTCATACGGATAGGGGTTCTGGACTGTTGACTCTAGCCGCTCTGCCAGCCAGGTaGAAGGATGACCGTCTGGCT +
Preference number: 4 (lower is better)
Translates to: QKRAPVHTDRGSGLLTLAALPAR*KDDRLA
Trigger: AGCCAGACGGTCATCCTTCCACCTGGCTGGCAGAGC...GGCTAGAGTCAACAGTCCAGAACCCCTATCCGTATGAACAGGGGCCCGTTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp CTGTTTGTTTCAGAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCTCCCAGGAGAACTGCTaGGACGTTCCCAGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: LFVSERQAQHGSQGVFSLSQENC*DVPRWS
Trigger: AGACCACCTGGGAACGTCCCAGCAGTTCTCCTGGGA...GAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTCTGAAACAAACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000585266.5
CDS-3UTR CCA 90 bp AAGGTGGCGGGACACTGCCTGAAAGGCGACAACCTAGTGTGGCCACAAGAGAGTTCCCAGGAGAACTGCTaGGACGTTCCCAGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: KVAGHCLKGDNLVWPQESSQENC*DVPRWS
Trigger: AGACCACCTGGGAACGTCCCAGCAGTTCTCCTGGGA...ACTCTCTTGTGGCCACACTAGGTTGTCGCCTTTCAGGCAGTGTCCCGCCACCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR CCA 90 bp ATGGATTTCCAGGGCATGGGCTCCCGACTAGAATCTGCCCCTCGCTCATGCTTCAGAGCCAGGGCTGGCTaGAATCCCAGGAGAACTGCT +
Preference number: 4 (lower is better)
Translates to: MDFQGMGSRLESAPRSCFRARAG*NPRRTA
Trigger: AGCAGTTCTCCTGGGATTCCAGCCAGCCCTGGCTCT...GAAGCATGAGCGAGGGGCAGATTCTAGTCGGGAGCCCATGCCCTGGAAATCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR CCA 90 bp GAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGAGACAAGGGCGTATCCATTCACTGTTaGAGGCAGAGAGCTCCTGTG +
Preference number: 4 (lower is better)
Translates to: ERQAQHGSQGVFSLRDKGVSIHC*RQRAPV
Trigger: CACAGGAGCTCTCTGCCTCCAACAGTGAATGGATAC...GCCCTTGTCTCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000585266.5
CDS-3UTR CCA 90 bp AATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAATCACCAGGGGGTCCCTGATGCGTaGTATCCATTCACTGTTGGA +
Preference number: 4 (lower is better)
Translates to: NMGEPPARLSGSPFWNHQGVPDA*YPFTVG
Trigger: TCCAACAGTGAATGGATACCACGCATCAGGGACCCC...CTGGTGATTCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000396115.6
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000579158.5
ENST00000585266.5
CDS-3UTR CCA 90 bp AATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAATCACCAGGTAGCTCCACTCGGTTaGTTTCAGCAGCTGCTGTTC +
Preference number: 4 (lower is better)
Translates to: NMGEPPARLSGSPFWNHQVAPLG*FQQLLF
Trigger: GAACAGCAGCTGCTGAAACCAACCGAGTGGAGCTAC...CTGGTGATTCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000579158.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp AAGGTGGCGGGACACTGCCTGAAAGGCGACAACCTAGTGTGGCCACAAGAGAGTACGGTGCCGTTGCCTTaGGGGTCCTTCTTATCAGCC +
Preference number: 4 (lower is better)
Translates to: KVAGHCLKGDNLVWPQESTVPLP*GSFLSA
Trigger: GGCTGATAAGAAGGACCCCCAAGGCAACGGCACCGT...ACTCTCTTGTGGCCACACTAGGTTGTCGCCTTTCAGGCAGTGTCCCGCCACCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp GTGGGTCTGTCTTCTGGGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCCCCTTCAGCTGTTTCTaGAGCAGTAGTTCAAACCCA +
Preference number: 4 (lower is better)
Translates to: VGLSSGPGNMGEPPARLSPFSCF*SSSSNP
Trigger: TGGGTTTGAACTACTGCTCCAGAAACAGCTGAAGGG...GGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCCCAGAAGACAGACCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp AATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAATCACCAGCGAAGGTCGGCAATGTaGTGGTCGCACTTCTTCATG +
Preference number: 4 (lower is better)
Translates to: NMGEPPARLSGSPFWNHQRRSAM*WSHFFM
Trigger: CATGAAGAAGTGCGACCACCACATTGCCGACCTTCG...CTGGTGATTCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000579158.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp CTGAGACGAGCTGGTTTGTTTCCATCCCTGAAGCCTTTGGACGAGCTGGATGAGCCGAGGCATAGCGGCTaGCGAGCTGCTTGCGAAGGT +
Preference number: 4 (lower is better)
Translates to: LRRAGLFPSLKPLDELDEPRHSG*RAACEG
Trigger: ACCTTCGCAAGCAGCTCGCCAGCCGCTATGCCTCGG...CTCATCCAGCTCGTCCAAAGGCTTCAGGGATGGAAACAAACCAGCTCGTCTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp GTGGGTCTGTCTTCTGGGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCCTAGCTCCAATGTGGTaGTCACCATCTCTTCAAACC +
Preference number: 4 (lower is better)
Translates to: VGLSSGPGNMGEPPARLSLAPMW*SPSLQT
Trigger: GGTTTGAAGAGATGGTGACCACCACATTGGAGCTAG...GGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCCCAGAAGACAGACCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp CTGAGACGAGCTGGTTTGTTTCCATCCCTGAAGCCTTTGGACGAGCTGGATGAGCGCAGCTGCGTGTACTaGCACAGGTGCTGCCGGATC +
Preference number: 4 (lower is better)
Translates to: LRRAGLFPSLKPLDELDERSCVY*HRCCRI
Trigger: GATCCGGCAGCACCTGTGCCAGTACACGCAGCTGCG...CTCATCCAGCTCGTCCAAAGGCTTCAGGGATGGAAACAAACCAGCTCGTCTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp AATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAATCACCAGACAGCTCCCTGTCTTTaGCCGGGTCCACTTTTCGAA +
Preference number: 4 (lower is better)
Translates to: NMGEPPARLSGSPFWNHQTAPCL*PGPLFE
Trigger: TTCGAAAAGTGGACCCGGCCAAAGACAGGGAGCTGT...CTGGTGATTCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000323816.8
ENST00000396115.6
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000579158.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp ACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTGGCATCCACTCGGCATaGGCCCCATGGTGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: TVTPTKLGKDHKVPASVCGIHSA*APWWEP
Trigger: GGGCTCCCACCATGGGGCCCATGCCGAGTGGATGCC...ACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp CATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGCCCAGGAGAGAGGGTaGGGGGCATCCACTCGGCAT +
Preference number: 4 (lower is better)
Translates to: HVTVTPTKLGKDHKVPASAQERG*GASTRH
Trigger: ATGCCGAGTGGATGCCCCCCACCCTCTCTCCTGGGC...AGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp ATGGATTTCCAGGGCATGGGCTCCCGACTAGAATCTGCCCCTCGCTCATGCTTCTCCGGGTCACCCTTCTaGAATCACCAGCTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: MDFQGMGSRLESAPRSCFSGSPF*NHQLSP
Trigger: GGGAGAGAGCTGGTGATTCCAGAAGGGTGACCCGGA...GAAGCATGAGCGAGGGGCAGATTCTAGTCGGGAGCCCATGCCCTGGAAATCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR CCA 90 bp TCCAGAAATGTCTCTGGTTCGCATAGAGAGGTACCCAACTGGTCTCGGGACTCACTGGGCCTGGGAATATaGGGGAGCCCCCAGCTAGGC +
Preference number: 4 (lower is better)
Translates to: SRNVSGSHREVPNWSRDSLGLGI*GSPQLG
Trigger: GCCTAGCTGGGGGCTCCCCCATATTCCCAGGCCCAG...TGAGTCCCGAGACCAGTTGGGTACCTCTCTATGCGAACCAGAGACATTTCTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp GTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTCTGGGCCTGGGAATATaGGGGAGCCCCCAGCTAGGC +
Preference number: 4 (lower is better)
Translates to: VTVTPTKLGKDHKVPASVLGLGI*GSPQLG
Trigger: GCCTAGCTGGGGGCTCCCCCATATTCCCAGGCCCAG...AACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp AGGGCACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTCTGGGCCTGGGAATATaGGGGAGCCCCCAGCTAGGC +
Preference number: 4 (lower is better)
Translates to: RAQACDSDPYKTRQGPQSLGLGI*GSPQLG
Trigger: GCCTAGCTGGGGGCTCCCCCATATTCCCAGGCCCAG...ACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTGCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp TGTTTGTTTCAGAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCATCTGTCTTCTGGGCCTaGGAATATGGGGGAGCCCCC +
Preference number: 4 (lower is better)
Translates to: CLFQSGKHSMGVRGSSASSVFWA*EYGGAP
Trigger: GGGGGCTCCCCCATATTCCCAGGCCCAGAAGACAGA...TGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTCTGAAACAAACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp CAGAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGAGACAAGGTCTGATCCTGACACCTaGCTTAGAGACAGAGCCCTC +
Preference number: 4 (lower is better)
Translates to: QSGKHSMGVRGSSASETRSDPDT*LRDRAL
Trigger: GAGGGCTCTGTCTCTAAGCCAGGTGTCAGGATCAGA...CCTTGTCTCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp CAGAAACGGGCCCCTGTTCATACGGATAGGGGTTCTGGACTGTTGACTCTAGCCCAGGCATGGTGGGTCTaGGAAGACAGGAGCCAAGCC +
Preference number: 4 (lower is better)
Translates to: QKRAPVHTDRGSGLLTLAQAWWV*EDRSQA
Trigger: GGCTTGGCTCCTGTCTTCCCAGACCCACCATGCCTG...GGCTAGAGTCAACAGTCCAGAACCCCTATCCGTATGAACAGGGGCCCGTTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp TGCTGGCCTCTGAGACGAGCTGGTTTGTTTCCATCCCTGAAGCCTTTGGACGAGCCTCTCCAGGCATGGTaGGTCTGGGAAGACAGGAGC +
Preference number: 4 (lower is better)
Translates to: CWPLRRAGLFPSLKPLDEPLQAW*VWEDRS
Trigger: GCTCCTGTCTTCCCAGACCCACCATGCCTGGAGAGG...CTCGTCCAAAGGCTTCAGGGATGGAAACAAACCAGCTCGTCTCAGAGGCCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp AGTAAGGGTTTGGTGCAGGGCTCTGGAATGTCCAGAAGGAGCGGGAAGCAAAGGCCTCTCCAGGCATGGTaGGTCTGGGAAGACAGGAGC +
Preference number: 4 (lower is better)
Translates to: SKGLVQGSGMSRRSGKQRPLQAW*VWEDRS
Trigger: GCTCCTGTCTTCCCAGACCCACCATGCCTGGAGAGG...CCTTTGCTTCCCGCTCCTTCTGGACATTCCAGAGCCCTGCACCAAACCCTTACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp TGTCCAGAAGGAGCGGGAAGCAAAGGTGGCGGGACACTGCCTGAAAGGCGACAATGGCGCCTGATCTCATaGGACACGATTCAGCGCTCA +
Preference number: 4 (lower is better)
Translates to: CPEGAGSKGGGTLPERRQWRLIS*DTIQRS
Trigger: TGAGCGCTGAATCGTGTCCCATGAGATCAGGCGCCA...TTGTCGCCTTTCAGGCAGTGTCCCGCCACCTTTGCTTCCCGCTCCTTCTGGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp AAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAAGCACAGCATGGGAGTCAGGGATTAAGAGCCTGTGGTaGGCGGCCCGGGAGAGTGGG +
Preference number: 4 (lower is better)
Translates to: KVPASVCFRAASTAWESGIKSLW*AARESG
Trigger: CCCACTCTCCCGGGCCGCCCACCACAGGCTCTTAAT...CCCTGACTCCCATGCTGTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp AATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAATCACCAGAGTGACCTCCAAAAATaGACTGGCCCAAACTGGGCC +
Preference number: 4 (lower is better)
Translates to: NMGEPPARLSGSPFWNHQSDLQK*TGPNWA
Trigger: GGCCCAGTTTGGGCCAGTCCATTTTTGGAGGTCACT...CTGGTGATTCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp TGTCCAGAAGGAGCGGGAAGCAAAGGTGGCGGGACACTGCCTGAAAGGCGACAACAAGCTGGAGTGCAGTaGCCCGATCTTGGTTCACTG +
Preference number: 4 (lower is better)
Translates to: CPEGAGSKGGGTLPERRQQAGVQ*PDLGSL
Trigger: CAGTGAACCAAGATCGGGCCACTGCACTCCAGCTTG...TTGTCGCCTTTCAGGCAGTGTCCCGCCACCTTTGCTTCCCGCTCCTTCTGGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp TGTTTCAGAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGAGACATCAGTCTCCTGGGTaGAGGCAGGTAGAAGGGGCT +
Preference number: 4 (lower is better)
Translates to: CFRAASTAWESGGLQPQRHQSPG*RQVEGA
Trigger: AGCCCCTTCTACCTGCCTCCACCCAGGAGACTGATG...TCTCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTCTGAAACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp AAGGTGGCGGGACACTGCCTGAAAGGCGACAACCTAGTGTGGCCACAAGAGAGTCATCAGTCTCCTGGGTaGAGGCAGGTAGAAGGGGCT +
Preference number: 4 (lower is better)
Translates to: KVAGHCLKGDNLVWPQESHQSPG*RQVEGA
Trigger: AGCCCCTTCTACCTGCCTCCACCCAGGAGACTGATG...ACTCTCTTGTGGCCACACTAGGTTGTCGCCTTTCAGGCAGTGTCCCGCCACCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp CAGAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGAGACAAGGAGGGAGCAGATCTGCTaGCTGAGATGCAAGCTTCAG +
Preference number: 4 (lower is better)
Translates to: QSGKHSMGVRGSSASETRREQIC*LRCKLQ
Trigger: CTGAAGCTTGCATCTCAGCCAGCAGATCTGCTCCCT...CCTTGTCTCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp GCTTCCAGGGCACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCAAACCCAGCAGAGTCCTaGCAGCCTCTTCGGCTCCCT +
Preference number: 4 (lower is better)
Translates to: ASRAQACDSDPYKTRQGPNPAES*QPLRLP
Trigger: AGGGAGCCGAAGAGGCTGCCAGGACTCTGCTGGGTT...TGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTGCCCTGGAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR CAA 72 bp ATGCAAGCTTCAGGTTGCAGCAGACGTGAGCAGCAATaGAGCACCCATCCGTCCCTTCCCCTCCCATCCCTG +
Preference number: 4 (lower is better)
Translates to: MQASGCSRREQQ*STHPSLPLPSL
Trigger: CAGGGATGGGAGGGGAAGGGACGGATGGGTGCTCAATTGCTGCTCACGTCTGCTGCAACCTGAAGCTTGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp CGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAAGCACAGCCATTGGTGGTCGTGTTaGCATAGTACCGCCGGCCCT +
Preference number: 4 (lower is better)
Translates to: RQGPQSSSLCLFQSGKHSHWWSC*HSTAGP
Trigger: AGGGCCGGCGGTACTATGTCAACACGACCACCAATG...GCTGTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000585266.5
CDS-3UTR TCA 90 bp TCCAGGGCACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAGTGCGCTGGGGTCCCTaGTGCGTGGTATCCATTCAC +
Preference number: 4 (lower is better)
Translates to: SRAQACDSDPYKTRQGPQVRWGP*CVVSIH
Trigger: GTGAATGGATACCACGCATCAGGGACCCCAGCGCAC...TTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTGCCCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000585266.5
CDS-3UTR TCA 90 bp GATCCTGACACCTGGCTTAGAGACAGAGCCCTCCCTACCCTGATCCTCCAAAGCGGCATCGTGTCTGGGTaGGGGAACGTCACACAGTTT +
Preference number: 4 (lower is better)
Translates to: DPDTWLRDRALPTLILQSGIVSG*GNVTQF
Trigger: AAACTGTGTGACGTTCCCTCACCCAGACACGATGCC...GCTTTGGAGGATCAGGGTAGGGAGGGCTCTGTCTCTAAGCCAGGTGTCAGGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR TCA 90 bp CTGTTTGTTTCAGAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCGCAGAGAACTTGAGGTaGACTTCTGCTTCGTCCGCC +
Preference number: 4 (lower is better)
Translates to: LFVSERQAQHGSQGVFSLAENLR*TSASSA
Trigger: GGCGGACGAAGCAGAAGTTCACCTCAAGTTCTCTGC...GAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTCTGAAACAAACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR TCA 90 bp CAGAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGAGACAAGGGCTTGGCAGAGAACTTaGGGTGAACTTCTGCTTCGT +
Preference number: 4 (lower is better)
Translates to: QSGKHSMGVRGSSASETRAWQRT*GELLLR
Trigger: ACGAAGCAGAAGTTCACCTCAAGTTCTCTGCCAAGC...CCTTGTCTCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR TCA 90 bp AATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAATCACCAGGCTTGGCAGAGAACTTaGGGTGAACTTCTGCTTCGT +
Preference number: 4 (lower is better)
Translates to: NMGEPPARLSGSPFWNHQAWQRT*GELLLR
Trigger: ACGAAGCAGAAGTTCACCTCAAGTTCTCTGCCAAGC...CTGGTGATTCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000579158.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR TCA 90 bp TGGGGGAAGGATGGATTGGCATTTCCAGAGGAGACTTTACAGATGGCGCCTGATCTCTCTGCCGCTCTGTaGGGGCTTTCCGGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: WGKDGLAFPEETLQMAPDLSAAL*GLSGPS
Trigger: AGAAGGCCCGGAAAGCCCTCACAGAGCGGCAGAGAG...ATCAGGCGCCATCTGTAAAGTCTCCTCTGGAAATGCCAATCCATCCTTCCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR TCA 90 bp TGTCCAGAAGGAGCGGGAAGCAAAGGTGGCGGGACACTGCCTGAAAGGCGACAATTCTCCGCGCCTTCTTaGTGTCCTCCTCTGTCTTGT +
Preference number: 4 (lower is better)
Translates to: CPEGAGSKGGGTLPERRQFSAPS*CPPLSC
Trigger: ACAAGACAGAGGAGGACATCAAGAAGGCGCGGAGAA...TTGTCGCCTTTCAGGCAGTGTCCCGCCACCTTTGCTTCCCGCTCCTTCTGGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR TCA 90 bp GATCCTGACACCTGGCTTAGAGACAGAGCCCTCCCTACCCTGATCCTCCAAAGCTTCTGGGTGCGGCTGTaGGCTGAATGGCACCTTCTA +
Preference number: 4 (lower is better)
Translates to: DPDTWLRDRALPTLILQSFWVRL*AEWHLL
Trigger: TAGAAGGTGCCATTCAGCTCACAGCCGCACCCAGAA...GCTTTGGAGGATCAGGGTAGGGAGGGCTCTGTCTCTAAGCCAGGTGTCAGGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR TCA 90 bp CGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAAGCACAGCGAGGTAGTTCCATCCTaGCCTCTCCAGGCATGGTGG +
Preference number: 4 (lower is better)
Translates to: RQGPQSSSLCLFQSGKHSEVVPS*PLQAWW
Trigger: CCACCATGCCTGGAGAGGTCAGGATGGAACTACCTC...GCTGTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR TCA 90 bp TGTTTGTTTCAGAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGAGGTAGTTCCATCCTaGCCTCTCCAGGCATGGTGG +
Preference number: 4 (lower is better)
Translates to: CLFQSGKHSMGVRGSSASEVVPS*PLQAWW
Trigger: CCACCATGCCTGGAGAGGTCAGGATGGAACTACCTC...TGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTCTGAAACAAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR TCA 90 bp ACAGTCCTGAACACCACACGCAATCTCCAAAGGCCATCGCCCCAACCTCACCCCGTTTGTTTCCATCCCTaGAGCCTTTGGACGAGCTGG +
Preference number: 4 (lower is better)
Translates to: TVLNTTRNLQRPSPQPHPVCFHP*SLWTSW
Trigger: CCAGCTCGTCCAAAGGCTTCAGGGATGGAAACAAAC...GGGGTGAGGTTGGGGCGATGGCCTTTGGAGATTGCGTGTGGTGTTCAGGACTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp GGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGAGACAAGGGCAGGGACAAGCCAAGGTCGCTaGTGTCCTTCGAATGTTATG +
Preference number: 4 (lower is better)
Translates to: GKHSMGVRGSSASETRAGTSQGR*CPSNVM
Trigger: CATAACATTCGAAGGACATCAGCGACCTTGGCTTGT...CCCTGCCCTTGTCTCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp AATGTCCAGAAGGAGCGGGAAGCAAAGGTGGCGGGACACTGCCTGAAAGGCGACAGCAGATCTGCTGGCTaGGATGCAAGCTTCAGGTTG +
Preference number: 4 (lower is better)
Translates to: NVQKEREAKVAGHCLKGDSRSAG*DASFRL
Trigger: CAACCTGAAGCTTGCATCTCAGCCAGCAGATCTGCT...GTCGCCTTTCAGGCAGTGTCCCGCCACCTTTGCTTCCCGCTCCTTCTGGACATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp CAGATGGCGCCTGATCTCATGGGACACGATTCAGCGCTCAATTTGGGGCTAATTCCCAGGAAGCCCTCCTaGCAGCCATGCCCCAGCATT +
Preference number: 4 (lower is better)
Translates to: QMAPDLMGHDSALNLGLIPRKPS*QPCPSI
Trigger: AATGCTGGGGCATGGCTGTCAGGAGGGCTTCCTGGG...AATTAGCCCCAAATTGAGCGCTGAATCGTGTCCCATGAGATCAGGCGCCATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp GACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGCCCAGGAAGCCCTCCTaGCAGCCATGCCCCAGCATT +
Preference number: 4 (lower is better)
Translates to: DSDPYKTRQGPQSSSLCLPRKPS*QPCPSI
Trigger: AATGCTGGGGCATGGCTGTCAGGAGGGCTTCCTGGG...CAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp ACAGTCCTGAACACCACACGCAATCTCCAAAGGCCATCGCCCCAACCTCACCCCACCAAGGAACAGTCCTaGACACCACACGCAATCTCC +
Preference number: 4 (lower is better)
Translates to: TVLNTTRNLQRPSPQPHPTKEQS*TPHAIS
Trigger: GGAGATTGCGTGTGGTGTTCAGGACTGTTCCTTGGT...GGGGTGAGGTTGGGGCGATGGCCTTTGGAGATTGCGTGTGGTGTTCAGGACTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp GAAAACTGTACAAGGGACAGCAGTCCCAGCCCTGCCATACACAAGAAGACAGAGCCCCCACTTGACAGATaGGTGCACGGAGGTCCCGAC +
Preference number: 4 (lower is better)
Translates to: ENCTRDSSPSPAIHKKTEPPLDR*VHGGPD
Trigger: GTCGGGACCTCCGTGCACTCATCTGTCAAGTGGGGG...CTCTGTCTTCTTGTGTATGGCAGGGCTGGGACTGCTGTCCCTTGTACAGTTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp AGTGACAGAAAACTGTACAAGGGACAGCAGTCCCAGCCCTGCCATACACAAGAACCCGTCTGCTGCAGGTaGTGCTGGAAGGGAAGCGCC +
Preference number: 4 (lower is better)
Translates to: SDRKLYKGQQSQPCHTQEPVCCR*CWKGSA
Trigger: GGCGCTTCCCTTCCAGCATCACCTGCAGCAGACGGG...TTCTTGTGTATGGCAGGGCTGGGACTGCTGTCCCTTGTACAGTTTTCTGTCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp CACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCACCCATTCAGGTTCCCTaGGGGTGGAGGCGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: HKHVTVTPTKLGKDHKVPPIQVP*GWRRWG
Trigger: TCCCCAGCGCCTCCACCCTCAGGGAACCTGAATGGG...TGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000580865.5
ENST00000583882.5
CDS-3UTR GCA 90 bp AATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAATCACCAGCCTTGCTCTGCTTTTTaGTTGGCGATGAGGATCCCA +
Preference number: 4 (lower is better)
Translates to: NMGEPPARLSGSPFWNHQPCSAF*LAMRIP
Trigger: TGGGATCCTCATCGCCAAGCAAAAAGCAGAGCAAGG...CTGGTGATTCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000323816.8
ENST00000396115.6
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000579158.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp GTGGGTCTGTCTTCTGGGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCGTGTTTTCCTTGCTCTaGTTTTTGCTTGGCGATGAG +
Preference number: 4 (lower is better)
Translates to: VGLSSGPGNMGEPPARLSVFSLL*FLLGDE
Trigger: CTCATCGCCAAGCAAAAAGCAGAGCAAGGAAAACAC...GGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCCCAGAAGACAGACCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000396115.6
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp GCACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCCAAACCCAGCCACGGTaGCGTTGCCTTGGGGGTCCT +
Preference number: 4 (lower is better)
Translates to: AQACDSDPYKTRQGPQSSQTQPR*RCLGGP
Trigger: AGGACCCCCAAGGCAACGGCACCGTGGCTGGGTTTG...GGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp GGATCCAGAAATGTCTCTGGTTCGCATAGAGAGGTACCCAACTGGTCTCGGGACGGCTGGCGAGCTGCTTaGGAAGGTCGGCAATGTGGT +
Preference number: 4 (lower is better)
Translates to: GSRNVSGSHREVPNWSRDGWRAA*EGRQCG
Trigger: ACCACATTGCCGACCTTCGCAAGCAGCTCGCCAGCC...GTCCCGAGACCAGTTGGGTACCTCTCTATGCGAACCAGAGACATTTCTGGATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp GATCCTGACACCTGGCTTAGAGACAGAGCCCTCCCTACCCTGATCCTCCAAAGCATCTCCAGGTCTCTCTaGCGCTCTGTGAGGGCTTTC +
Preference number: 4 (lower is better)
Translates to: DPDTWLRDRALPTLILQSISRSL*RSVRAF
Trigger: GAAAGCCCTCACAGAGCGGCAGAGAGACCTGGAGAT...GCTTTGGAGGATCAGGGTAGGGAGGGCTCTGTCTCTAAGCCAGGTGTCAGGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp TGTTTCAGAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGAGAGTGTACTGGCACAGGTaGTGCCGGATCATCTCTACC +
Preference number: 4 (lower is better)
Translates to: CFRAASTAWESGGLQPQRVYWHR*CRIIST
Trigger: GGTAGAGATGATCCGGCAGCACCTGTGCCAGTACAC...TCTCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTCTGAAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp AGTAAGGGTTTGGTGCAGGGCTCTGGAATGTCCAGAAGGAGCGGGAAGCAAAGGGTTTCATGCCGCAGCTaGGTGTACTGGCACAGGTGC +
Preference number: 4 (lower is better)
Translates to: SKGLVQGSGMSRRSGKQRVSCRS*VYWHRC
Trigger: GCACCTGTGCCAGTACACGCAGCTGCGGCATGAAAC...CCTTTGCTTCCCGCTCCTTCTGGACATTCCAGAGCCCTGCACCAAACCCTTACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp AATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAATCACCAGAACATGTCTGTTTCATaGCGCAGCTGCGTGTACTGG +
Preference number: 4 (lower is better)
Translates to: NMGEPPARLSGSPFWNHQNMSVS*RSCVYW
Trigger: CCAGTACACGCAGCTGCGGCATGAAACAGACATGTT...CTGGTGATTCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000323816.8
ENST00000396115.6
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000579158.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp CACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAAGGGCAGCCCAAAGGTaGACAGGGCACCGTGGCGGA +
Preference number: 4 (lower is better)
Translates to: HKHVTVTPTKLGKDHKVPRAAQR*TGHRGG
Trigger: TCCGCCACGGTGCCCTGTGCACCTTTGGGCTGCCCT...TGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp TGCTGGCCTCTGAGACGAGCTGGTTTGTTTCCATCCCTGAAGCCTTTGGACGAGGGCCACAAGAGAGTCTaGTATGCCTGTCCAGTGCCC +
Preference number: 4 (lower is better)
Translates to: CWPLRRAGLFPSLKPLDEGHKRV*YACPVP
Trigger: GGGCACTGGACAGGCATAGCAGACTCTCTTGTGGCC...CTCGTCCAAAGGCTTCAGGGATGGAAACAAACCAGCTCGTCTCAGAGGCCAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp GCTTCCAGGGCACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCAGGCCACAAGAGAGTCTaGTATGCCTGTCCAGTGCCC +
Preference number: 4 (lower is better)
Translates to: ASRAQACDSDPYKTRQGPGHKRV*YACPVP
Trigger: GGGCACTGGACAGGCATAGCAGACTCTCTTGTGGCC...TGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTGCCCTGGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp TTTGTTTCAGAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGAGGCCACAAGAGAGTCTaGTATGCCTGTCCAGTGCCC +
Preference number: 4 (lower is better)
Translates to: FVSERQAQHGSQGVFSLRGHKRV*YACPVP
Trigger: GGGCACTGGACAGGCATAGCAGACTCTCTTGTGGCC...TCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTCTGAAACAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp AAGGTGGCGGGACACTGCCTGAAAGGCGACAACCTAGTGTGGCCACAAGAGAGTCTCCCGACTAGAATCTaGCCCTCGCTCATGCTTCTC +
Preference number: 4 (lower is better)
Translates to: KVAGHCLKGDNLVWPQESLPTRI*PSLMLL
Trigger: GAGAAGCATGAGCGAGGGGCAGATTCTAGTCGGGAG...ACTCTCTTGTGGCCACACTAGGTTGTCGCCTTTCAGGCAGTGTCCCGCCACCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR GCA 90 bp GTGGAGGAAACACATTCATACCGGGGTGAGGAGTGCTGGCGGGAGACACGGCTCGAATTCTGCCCTCACTaGAGATGTGCAGGTCAAACC +
Preference number: 4 (lower is better)
Translates to: VEETHSYRGEECWRETRLEFCPH*RCAGQT
Trigger: GGTTTGACCTGCACATCTGCAGTGAGGGCAGAATTC...GAGCCGTGTCTCCCGCCAGCACTCCTCACCCCGGTATGAATGTGTTTCCTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp CATCTCACATGTAGGACTGACCCGGCCCCATTAAGAGCCTGTGGTGGGCGGCCCGTGCTTGTTGAATTCTaGCCTCACTGCAGATGTGCA +
Preference number: 4 (lower is better)
Translates to: HLTCRTDPAPLRACGGRPVLVEF*PHCRCA
Trigger: TGCACATCTGCAGTGAGGGCAGAATTCAACAAGCAC...GGGCCGCCCACCACAGGCTCTTAATGGGGCCGGGTCAGTCCTACATGTGAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR GCA 90 bp TGTTTCAGAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGAGACGCCGCTTCTCAGCATaGCTGGCTTGTCTTGAGCAT +
Preference number: 4 (lower is better)
Translates to: CFRAASTAWESGGLQPQRRRFSA*LACLEH
Trigger: ATGCTCAAGACAAGCCAGGCATGCTGAGAAGCGGCG...TCTCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTCTGAAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp AATGTCCAGAAGGAGCGGGAAGCAAAGGTGGCGGGACACTGCCTGAAAGGCGACACAACCCGGATAGCGTaGTTGCCTCTCCAAAGTGCA +
Preference number: 4 (lower is better)
Translates to: NVQKEREAKVAGHCLKGDTTRIA*LPLQSA
Trigger: TGCACTTTGGAGAGGCAAGCACGCTATCCGGGTTGT...GTCGCCTTTCAGGCAGTGTCCCGCCACCTTTGCTTCCCGCTCCTTCTGGACATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp GAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGAGACAAGGGCAGCTGGAAGTGGTCGTaGAAACAAGTTGAAGACCCT +
Preference number: 4 (lower is better)
Translates to: ERQAQHGSQGVFSLRDKGSWKWS*KQVEDP
Trigger: AGGGTCTTCAACTTGTTTGCACGACCACTTCCAGCT...GCCCTTGTCTCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp CATGATTCTGATCCTGACACCTGGCTTAGAGACAGAGCCCTCCCTACCCTGATCCACCATCCAGTGGGGTaGAGGTACAGGCCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: HDSDPDTWLRDRALPTLIHHPVG*RYRPGC
Trigger: ACAGCCTGGCCTGTACCTGCACCCCACTGGATGGTG...GATCAGGGTAGGGAGGGCTCTGTCTCTAAGCCAGGTGTCAGGATCAGAATCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp CGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAAGCACAGCGTGTGGTCCTGTCCCTaGCACCATGTACCACCATCC +
Preference number: 4 (lower is better)
Translates to: RQGPQSSSLCLFQSGKHSVWSCP*HHVPPS
Trigger: GGATGGTGGTACATGGTGGCAGGGACAGGACCACAC...GCTGTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp AGTAAGGGTTTGGTGCAGGGCTCTGGAATGTCCAGAAGGAGCGGGAAGCAAAGGGTGTGGTCCTGTCCCTaGCACCATGTACCACCATCC +
Preference number: 4 (lower is better)
Translates to: SKGLVQGSGMSRRSGKQRVWSCP*HHVPPS
Trigger: GGATGGTGGTACATGGTGGCAGGGACAGGACCACAC...CCTTTGCTTCCCGCTCCTTCTGGACATTCCAGAGCCCTGCACCAAACCCTTACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp GGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGAGACAAGGGCAGGGCTCGCTCTAACCTGCTaGAATGGGAATTGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: GKHSMGVRGSSASETRAGLALTC*NGNCFF
Trigger: GAAGAAGCAATTCCCATTGCAGCAGGTTAGAGCGAG...CCCTGCCCTTGTCTCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp CGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAAGCACAGCAGAGCCAGGGCTGGCTaGAATCCCAGGAGAACTGCT +
Preference number: 4 (lower is better)
Translates to: RQGPQSSSLCLFQSGKHSRARAG*NPRRTA
Trigger: AGCAGTTCTCCTGGGATTCCAGCCAGCCCTGGCTCT...GCTGTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000585266.5
CDS-3UTR CCA 90 bp AATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAATCACCAGGTATCCATTCACTGTTaGAGGCAGAGAGCTCCTGTG +
Preference number: 4 (lower is better)
Translates to: NMGEPPARLSGSPFWNHQVSIHC*RQRAPV
Trigger: CACAGGAGCTCTCTGCCTCCAACAGTGAATGGATAC...CTGGTGATTCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000396115.6
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000579158.5
ENST00000585266.5
CDS-3UTR CCA 90 bp GGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGAGACAAGGGCAGGGTCTGGGAATCACCGGTaGATTTTCGGACACTCATGT +
Preference number: 4 (lower is better)
Translates to: GKHSMGVRGSSASETRAGSGNHR*IFGHSC
Trigger: ACATGAGTGTCCGAAAATCCACCGGTGATTCCCAGA...CCCTGCCCTTGTCTCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000585266.5
CDS-3UTR CCA 90 bp AATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAATCACCAGGAGGATCCCAGGTTCTaGGAATCACCGGTGGATTTT +
Preference number: 4 (lower is better)
Translates to: NMGEPPARLSGSPFWNHQEDPRF*ESPVDF
Trigger: AAAATCCACCGGTGATTCCCAGAACCTGGGATCCTC...CTGGTGATTCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000396115.6
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000579158.5
ENST00000585266.5
CDS-3UTR CCA 90 bp AATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAATCACCAGAGGTCGGCAATGTGGTaGTCGCACTTCTTCATGTCT +
Preference number: 4 (lower is better)
Translates to: NMGEPPARLSGSPFWNHQRSAMW*SHFFMS
Trigger: AGACATGAAGAAGTGCGACCACCACATTGCCGACCT...CTGGTGATTCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000579158.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp AATGTCCAGAAGGAGCGGGAAGCAAAGGTGGCGGGACACTGCCTGAAAGGCGACCGAAGGTCGGCAATGTaGTGGTCGCACTTCTTCATG +
Preference number: 4 (lower is better)
Translates to: NVQKEREAKVAGHCLKGDRRSAM*WSHFFM
Trigger: CATGAAGAAGTGCGACCACCACATTGCCGACCTTCG...GTCGCCTTTCAGGCAGTGTCCCGCCACCTTTGCTTCCCGCTCCTTCTGGACATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp GCTTCCAGGGCACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACGTCTCCAGCCTGTGTaGACTTTCTCCGCGCCTTCT +
Preference number: 4 (lower is better)
Translates to: ASRAQACDSDPYKTRQGPRLQPV*TFSAPS
Trigger: AGAAGGCGCGGAGAAAGTCCACACAGGCTGGAGACG...TGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTGCCCTGGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp GACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGCGCAGCTGCGTGTACTaGCACAGGTGCTGCCGGATC +
Preference number: 4 (lower is better)
Translates to: DSDPYKTRQGPQSSSLCLRSCVY*HRCCRI
Trigger: GATCCGGCAGCACCTGTGCCAGTACACGCAGCTGCG...CAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp TGGGGGAAGGATGGATTGGCATTTCCAGAGGAGACTTTACAGATGGCGCCTGATCGCAGCTGCGTGTACTaGCACAGGTGCTGCCGGATC +
Preference number: 4 (lower is better)
Translates to: WGKDGLAFPEETLQMAPDRSCVY*HRCCRI
Trigger: GATCCGGCAGCACCTGTGCCAGTACACGCAGCTGCG...ATCAGGCGCCATCTGTAAAGTCTCCTCTGGAAATGCCAATCCATCCTTCCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp TGTTTGTTTCAGAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCATCCGGGTCACCCTTCTaGAATCACCAGCTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: CLFQSGKHSMGVRGSSASSGSPF*NHQLSP
Trigger: GGGAGAGAGCTGGTGATTCCAGAAGGGTGACCCGGA...TGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTCTGAAACAAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp CATGATTCTGATCCTGACACCTGGCTTAGAGACAGAGCCCTCCCTACCCTGATCTCTGTCTTCTGGGCCTaGGAATATGGGGGAGCCCCC +
Preference number: 4 (lower is better)
Translates to: HDSDPDTWLRDRALPTLISVFWA*EYGGAP
Trigger: GGGGGCTCCCCCATATTCCCAGGCCCAGAAGACAGA...GATCAGGGTAGGGAGGGCTCTGTCTCTAAGCCAGGTGTCAGGATCAGAATCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp AAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAAGCACAGCATGGGAGTCAGGGGCGGCAAGCACAGCATaGGAGTCAGGGGGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: KVPASVCFRAASTAWESGAASTA*ESGGLQ
Trigger: CTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGC...CCCTGACTCCCATGCTGTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp GCTTCCAGGGCACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCAGATCCTCCAAAGCCCTaGAGACAAGGGAGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: ASRAQACDSDPYKTRQGPDPPKP*RQGSQL
Trigger: CAGCTGGCTCCCTTGTCTCCAGGGCTTTGGAGGATC...TGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTGCCCTGGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000583882.5
ENST00000585266.5
CDS-3UTR CCA 90 bp GGAAGAGCCTTGGGGCTTCCAGGGCACAAGCATGTGACAGTGACCCCTACAAAAGATCCTCCAAAGCCCTaGAGACAAGGGAGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: GRALGLPGHKHVTVTPTKDPPKP*RQGSQL
Trigger: CAGCTGGCTCCCTTGTCTCCAGGGCTTTGGAGGATC...TTTTGTAGGGGTCACTGTCACATGCTTGTGCCCTGGAAGCCCCAAGGCTCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000583882.5
ENST00000585266.5
CDS-3UTR CCA 90 bp CAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCAGGCCCCAGCTTGCTaGCCTCTGAGACGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: QACDSDPYKTRQGPQSSSQAPAC*PLRRAG
Trigger: ACCAGCTCGTCTCAGAGGCCAGCAAGCTGGGGCCTG...GCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp CATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTCCCATTAAGAGCCTGTaGTGGGCGGCCCGGGAGAGT +
Preference number: 4 (lower is better)
Translates to: HVTVTPTKLGKDHKVPASPIKSL*WAARES
Trigger: ACTCTCCCGGGCCGCCCACCACAGGCTCTTAATGGG...AGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp CAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCCCATTAAGAGCCTGTaGTGGGCGGCCCGGGAGAGT +
Preference number: 4 (lower is better)
Translates to: QACDSDPYKTRQGPQSSSPIKSL*WAARES
Trigger: ACTCTCCCGGGCCGCCCACCACAGGCTCTTAATGGG...GCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp GGATTTCCAGGGCATGGGCTCCCGACTAGAATCTGCCCCTCGCTCATGCTTCTCGAAGACAGAGCCATCTaGGGGATGGCAAAGACTTGC +
Preference number: 4 (lower is better)
Translates to: GFPGHGLPTRICPSLMLLEDRAI*GMAKTC
Trigger: GCAAGTCTTTGCCATCCCCCAGATGGCTCTGTCTTC...GAGAAGCATGAGCGAGGGGCAGATTCTAGTCGGGAGCCCATGCCCTGGAAATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR CCA 90 bp CAGAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGAGACAAGGCACCAAGTAAGGGTTTaGTGCAGGGCTCTGGAATGT +
Preference number: 4 (lower is better)
Translates to: QSGKHSMGVRGSSASETRHQVRV*CRALEC
Trigger: ACATTCCAGAGCCCTGCACCAAACCCTTACTTGGTG...CCTTGTCTCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp TGTCCAGAAGGAGCGGGAAGCAAAGGTGGCGGGACACTGCCTGAAAGGCGACAAACCCAACCCCAGATCTaGACAGAGTGGTTCTCCATC +
Preference number: 4 (lower is better)
Translates to: CPEGAGSKGGGTLPERRQTQPQI*TEWFSI
Trigger: GATGGAGAACCACTCTGTCCAGATCTGGGGTTGGGT...TTGTCGCCTTTCAGGCAGTGTCCCGCCACCTTTGCTTCCCGCTCCTTCTGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR CCA 90 bp GGGGTGGTGCGGGGGCAGGTGGGTTACAGCCTCCACTGGGATCAGGGTTTCAACTCTAAAATTGGTAGCTaGTGTCATGACCCAACCCCA +
Preference number: 4 (lower is better)
Translates to: GVVRGQVGYSLHWDQGFNSKIGS*CHDPTP
Trigger: TGGGGTTGGGTCATGACACCAGCTACCAATTTTAGA...GTTGAAACCCTGATCCCAGTGGAGGCTGTAACCCACCTGCCCCCGCACCACCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp CCGACTAGAATCTGCCCCTCGCTCATGCTTCTCCCGGCCCCTTTAGACTCTTTATGGACTGGCCCAAACTaGGCCAACCTGAGCTACCCT +
Preference number: 4 (lower is better)
Translates to: PTRICPSLMLLPAPLDSLWTGPN*ANLSYP
Trigger: AGGGTAGCTCAGGTTGGCCCAGTTTGGGCCAGTCCA...TAAAGAGTCTAAAGGGGCCGGGAGAAGCATGAGCGAGGGGCAGATTCTAGTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp AATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAATCACCAGACAAGTGGCTCTTCCTaGAGGTTGTCACAGCAACCA +
Preference number: 4 (lower is better)
Translates to: NMGEPPARLSGSPFWNHQTSGSS*RLSQQP
Trigger: TGGTTGCTGTGACAACCTCCAGGAAGAGCCACTTGT...CTGGTGATTCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp GGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGATTCCAAAAGGGACTTTaGCTCAGCCCAGATTTTTCT +
Preference number: 4 (lower is better)
Translates to: GLGIWGSPQLGCPGHPSGFQKGL*LSPDFS
Trigger: AGAAAAATCTGGGCTGAGCCAAAGTCCCTTTTGGAA...TCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp AATGTCCAGAAGGAGCGGGAAGCAAAGGTGGCGGGACACTGCCTGAAAGGCGACAGGGAGCAGATCTGCTaGCTGAGATGCAAGCTTCAG +
Preference number: 4 (lower is better)
Translates to: NVQKEREAKVAGHCLKGDREQIC*LRCKLQ
Trigger: CTGAAGCTTGCATCTCAGCCAGCAGATCTGCTCCCT...GTCGCCTTTCAGGCAGTGTCCCGCCACCTTTGCTTCCCGCTCCTTCTGGACATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp GCTTCCAGGGCACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCATCTTCACGCCTGTCCTaGCTCCTGGGGAGTAGACTC +
Preference number: 4 (lower is better)
Translates to: ASRAQACDSDPYKTRQGPSSRLS*LLGSRL
Trigger: GAGTCTACTCCCCAGGAGCCAGGACAGGCGTGAAGA...TGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTGCCCTGGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp TTTGTTTCAGAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGATGTACCACCATCCAGTaGGGTGCAGGTACAGGCCAG +
Preference number: 4 (lower is better)
Translates to: FVSERQAQHGSQGVFSLRCTTIQ*GAGTGQ
Trigger: CTGGCCTGTACCTGCACCCCACTGGATGGTGGTACA...TCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTCTGAAACAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp GGATTTCCAGGGCATGGGCTCCCGACTAGAATCTGCCCCTCGCTCATGCTTCTCAGAGAGGTACCCAACTaGTCTCGGGACTCACCTTTC +
Preference number: 4 (lower is better)
Translates to: GFPGHGLPTRICPSLMLLREVPN*SRDSPF
Trigger: GAAAGGTGAGTCCCGAGACCAGTTGGGTACCTCTCT...GAGAAGCATGAGCGAGGGGCAGATTCTAGTCGGGAGCCCATGCCCTGGAAATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp GAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGAGACAAGGGCAATCTTCACCTGGCCTaGATCCAGAAATGTCTCTGG +
Preference number: 4 (lower is better)
Translates to: ERQAQHGSQGVFSLRDKGNLHLA*IQKCLW
Trigger: CCAGAGACATTTCTGGATCCAGGCCAGGTGAAGATT...GCCCTTGTCTCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp CATGATTCTGATCCTGACACCTGGCTTAGAGACAGAGCCCTCCCTACCCTGATCGTCCACACAGCTGCCTaGAACCCACGACTCCCGAGA +
Preference number: 4 (lower is better)
Translates to: HDSDPDTWLRDRALPTLIVHTAA*NPRLPR
Trigger: TCTCGGGAGTCGTGGGTTCCAGGCAGCTGTGTGGAC...GATCAGGGTAGGGAGGGCTCTGTCTCTAAGCCAGGTGTCAGGATCAGAATCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp GTGGAGGAAACACATTCATACCGGGGTGAGGAGTGCTGGCGGGAGACACGGCTCGTCACTAAGGATGGCTaGCGTCCCTTTGAATGTCTG +
Preference number: 4 (lower is better)
Translates to: VEETHSYRGEECWRETRLVTKDG*RPFECL
Trigger: CAGACATTCAAAGGGACGCCAGCCATCCTTAGTGAC...GAGCCGTGTCTCCCGCCAGCACTCCTCACCCCGGTATGAATGTGTTTCCTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp CGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAAGCACAGCCTCAGAGGAGAGTCTTaGGTCCTGCCTGAAGCCCTC +
Preference number: 4 (lower is better)
Translates to: RQGPQSSSLCLFQSGKHSLRGES*VLPEAL
Trigger: GAGGGCTTCAGGCAGGACCCAAGACTCTCCTCTGAG...GCTGTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585266.5
3UTR CAA 72 bp AGGGCCGCCATCCCCACGGTCCAAGGGGCCTATGTGTaGCCACTGACTGAAAGCACTAGAAAGAATAGAGGG +
Preference number: 4 (lower is better)
Translates to: RAAIPTVQGAYV*PLTESTRKNRG
Trigger: CCCTCTATTCTTTCTAGTGCTTTCAGTCAGTGGCAACACATAGGCCCCTTGGACCGTGGGGATGGCGGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp GCACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCGTGCGCTGGGGTCCCTaGTGCGTGGTATCCATTCAC +
Preference number: 4 (lower is better)
Translates to: AQACDSDPYKTRQGPQSSVRWGP*CVVSIH
Trigger: GTGAATGGATACCACGCATCAGGGACCCCAGCGCAC...GGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000585266.5
CDS-3UTR TCA 90 bp AGGGTTTGCCGATGTGCTCGTGTCTGTGAAGGGGTTGCTTCCGGTCATCTCCTTGCAGAGAACTTGAGGTaGACTTCTGCTTCGTCCGCC +
Preference number: 4 (lower is better)
Translates to: RVCRCARVCEGVASGHLLAENLR*TSASSA
Trigger: GGCGGACGAAGCAGAAGTTCACCTCAAGTTCTCTGC...AAGGAGATGACCGGAAGCAACCCCTTCACAGACACGAGCACATCGGCAAACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp ATGGATTTCCAGGGCATGGGCTCCCGACTAGAATCTGCCCCTCGCTCATGCTTCTTCTCCGCGCCTTCTTaGTGTCCTCCTCTGTCTTGT +
Preference number: 4 (lower is better)
Translates to: MDFQGMGSRLESAPRSCFFSAPS*CPPLSC
Trigger: ACAAGACAGAGGAGGACATCAAGAAGGCGCGGAGAA...GAAGCATGAGCGAGGGGCAGATTCTAGTCGGGAGCCCATGCCCTGGAAATCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR TCA 90 bp CGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAAGCACAGCACTTTTCGAAGCAGCTaGTCCACGGGCTCGACTGTG +
Preference number: 4 (lower is better)
Translates to: RQGPQSSSLCLFQSGKHSTFRSS*STGSTV
Trigger: CACAGTCGAGCCCGTGGATCAGCTGCTTCGAAAAGT...GCTGTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR TCA 90 bp AGTAAGGGTTTGGTGCAGGGCTCTGGAATGTCCAGAAGGAGCGGGAAGCAAAGGACTTTTCGAAGCAGCTaGTCCACGGGCTCGACTGTG +
Preference number: 4 (lower is better)
Translates to: SKGLVQGSGMSRRSGKQRTFRSS*STGSTV
Trigger: CACAGTCGAGCCCGTGGATCAGCTGCTTCGAAAAGT...CCTTTGCTTCCCGCTCCTTCTGGACATTCCAGAGCCCTGCACCAAACCCTTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR TCA 90 bp TCCAGGGCACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAGGTGCGGCTGTGAGCTaGATGGCACCTTCTACCCAT +
Preference number: 4 (lower is better)
Translates to: SRAQACDSDPYKTRQGPQGAAVS*MAPSTH
Trigger: ATGGGTAGAAGGTGCCATTCAGCTCACAGCCGCACC...TTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTGCCCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR TCA 90 bp CTGAGACGAGCTGGTTTGTTTCCATCCCTGAAGCCTTTGGACGAGCTGGATGAGGGTGCGGCTGTGAGCTaGATGGCACCTTCTACCCAT +
Preference number: 4 (lower is better)
Translates to: LRRAGLFPSLKPLDELDEGAAVS*MAPSTH
Trigger: ATGGGTAGAAGGTGCCATTCAGCTCACAGCCGCACC...CTCATCCAGCTCGTCCAAAGGCTTCAGGGATGGAAACAAACCAGCTCGTCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR TCA 90 bp TTTGTTTCAGAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGACAGCTTGCTGGCCTCTaGGACGAGCTGGTTTGTTTC +
Preference number: 4 (lower is better)
Translates to: FVSERQAQHGSQGVFSLRQLAGL*DELVCF
Trigger: GAAACAAACCAGCTCGTCTCAGAGGCCAGCAAGCTG...TCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTCTGAAACAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR TCA 90 bp AAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAAGCACAGCATGGGAGTCAGGGCAAACTGGGCCAACCTaGGCTACCCTGGAAGACGCA +
Preference number: 4 (lower is better)
Translates to: KVPASVCFRAASTAWESGQTGPT*ATLEDA
Trigger: TGCGTCTTCCAGGGTAGCTCAGGTTGGCCCAGTTTG...CCCTGACTCCCATGCTGTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp AAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAAGCACAGCATGGGAGTCAGGGATTGGATATGGGCCGTaGGGGTCTGGTGACCAGGTG +
Preference number: 4 (lower is better)
Translates to: KVPASVCFRAASTAWESGIGYGP*GSGDQV
Trigger: CACCTGGTCACCAGACCCTCACGGCCCATATCCAAT...CCCTGACTCCCATGCTGTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp GAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGAGACAAGGGCCTCACTGGTTACCCTTaGGCTTCACTTTCCTATTTG +
Preference number: 4 (lower is better)
Translates to: ERQAQHGSQGVFSLRDKGLTGYP*ASLSYL
Trigger: CAAATAGGAAAGTGAAGCTCAAGGGTAACCAGTGAG...GCCCTTGTCTCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp AATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAATCACCAGGAAACCCCTGGTTGGTaGATTCGTTGGTACACTGTT +
Preference number: 4 (lower is better)
Translates to: NMGEPPARLSGSPFWNHQETPGW*IRWYTV
Trigger: AACAGTGTACCAACGAATTCACCAACCAGGGGTTTC...CTGGTGATTCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp GAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGAGACAAGGGCTCAAAAGCATTAAGCTaGGGGAAAGATGCCAGACTC +
Preference number: 4 (lower is better)
Translates to: ERQAQHGSQGVFSLRDKGSKALS*GKDARL
Trigger: GAGTCTGGCATCTTTCCCTCAGCTTAATGCTTTTGA...GCCCTTGTCTCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp GATCCTGACACCTGGCTTAGAGACAGAGCCCTCCCTACCCTGATCCTCCAAAGCCAGTTGCCGGTGGCCTaGGACACTCATCTAGAACAA +
Preference number: 4 (lower is better)
Translates to: DPDTWLRDRALPTLILQSQLPVA*DTHLEQ
Trigger: TTGTTCTAGATGAGTGTCTCAGGCCACCGGCAACTG...GCTTTGGAGGATCAGGGTAGGGAGGGCTCTGTCTCTAAGCCAGGTGTCAGGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp GCACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCTGGCTGGCGTCCCTTTaGATGTCTGTCCCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: AQACDSDPYKTRQGPQSSWLASL*MSVPGS
Trigger: GGACCCAGGGACAGACATTCAAAGGGACGCCAGCCA...GGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp AGGGCACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTACATTCATACCGGGGTaGGGAGTGCTGGCGGGAGAC +
Preference number: 4 (lower is better)
Translates to: RAQACDSDPYKTRQGPQSTFIPG*GVLAGD
Trigger: GTCTCCCGCCAGCACTCCTCACCCCGGTATGAATGT...ACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp CAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCGGCCCATAAACCCCTaGGGTCAGAGGCAGCACACA +
Preference number: 4 (lower is better)
Translates to: QACDSDPYKTRQGPQSSSRPINP*GQRQHT
Trigger: TGTGTGCTGCCTCTGACCTCAGGGGTTTATGGGCCG...GCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000542249.5
CDS-3UTR GCA 90 bp TCCAGGGCACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAGAATCCCAGGAGAACTaGTGGGACGTTCCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: SRAQACDSDPYKTRQGPQESQEN*WDVPRW
Trigger: CCACCTGGGAACGTCCCAGCAGTTCTCCTGGGATTC...TTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTGCCCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000585266.5
CDS-3UTR GCA 90 bp CTGAGACGAGCTGGTTTGTTTCCATCCCTGAAGCCTTTGGACGAGCTGGATGAGCAGCCACGGTGCCGTTaGCTTGGGGGTCCTTCTTAT +
Preference number: 4 (lower is better)
Translates to: LRRAGLFPSLKPLDELDEQPRCR*LGGPSY
Trigger: ATAAGAAGGACCCCCAAGGCAACGGCACCGTGGCTG...CTCATCCAGCTCGTCCAAAGGCTTCAGGGATGGAAACAAACCAGCTCGTCTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp TACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCCAAACCCAGCCACGGTaGCGTTGCCTTGGGGGTCCT +
Preference number: 4 (lower is better)
Translates to: YKTRQGPQSSSLCLFQSGQTQPR*RCLGGP
Trigger: AGGACCCCCAAGGCAACGGCACCGTGGCTGGGTTTG...GCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp AAGGTGGCGGGACACTGCCTGAAAGGCGACAACCTAGTGTGGCCACAAGAGAGTAGCTTGATCTCCAGCTaGTGGGTCTTCATCTCCAGG +
Preference number: 4 (lower is better)
Translates to: KVAGHCLKGDNLVWPQESSLISS*WVFISR
Trigger: CCTGGAGATGAAGACCCAGCAGCTGGAGATCAAGCT...ACTCTCTTGTGGCCACACTAGGTTGTCGCCTTTCAGGCAGTGTCCCGCCACCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp AGGGTTTGCCGATGTGCTCGTGTCTGTGAAGGGGTTGCTTCCGGTCATCTCCTTGTGTACTGGCACAGGTaGTGCCGGATCATCTCTACC +
Preference number: 4 (lower is better)
Translates to: RVCRCARVCEGVASGHLLVYWHR*CRIIST
Trigger: GGTAGAGATGATCCGGCAGCACCTGTGCCAGTACAC...AAGGAGATGACCGGAAGCAACCCCTTCACAGACACGAGCACATCGGCAAACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp CGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAAGCACAGCATGTTGCCCGTCTTGTaGTCTCTGACCCACAGCTCC +
Preference number: 4 (lower is better)
Translates to: RQGPQSSSLCLFQSGKHSMLPVL*SLTHSS
Trigger: GGAGCTGTGGGTCAGAGAGCACAAGACGGGCAACAT...GCTGTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp ATGGATTTCCAGGGCATGGGCTCCCGACTAGAATCTGCCCCTCGCTCATGCTTCCAGCAGTCCCAGCCCTaGCATACACAAGAAGACAGA +
Preference number: 4 (lower is better)
Translates to: MDFQGMGSRLESAPRSCFQQSQP*HTQEDR
Trigger: TCTGTCTTCTTGTGTATGGCAGGGCTGGGACTGCTG...GAAGCATGAGCGAGGGGCAGATTCTAGTCGGGAGCCCATGCCCTGGAAATCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR GCA 90 bp AAGGTGGCGGGACACTGCCTGAAAGGCGACAACCTAGTGTGGCCACAAGAGAGTGCTATGCCTGTCCAGTaGCCACCAGTGACAGAAAAC +
Preference number: 4 (lower is better)
Translates to: KVAGHCLKGDNLVWPQESAMPVQ*PPVTEN
Trigger: GTTTTCTGTCACTGGTGGGCACTGGACAGGCATAGC...ACTCTCTTGTGGCCACACTAGGTTGTCGCCTTTCAGGCAGTGTCCCGCCACCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp TGCTGGCCTCTGAGACGAGCTGGTTTGTTTCCATCCCTGAAGCCTTTGGACGAGCAAGAGAGTCTGCTATaGCTGTCCAGTGCCCACCAG +
Preference number: 4 (lower is better)
Translates to: CWPLRRAGLFPSLKPLDEQESLL*LSSAHQ
Trigger: CTGGTGGGCACTGGACAGGCATAGCAGACTCTCTTG...CTCGTCCAAAGGCTTCAGGGATGGAAACAAACCAGCTCGTCTCAGAGGCCAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp CGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAAGCACAGCAAGGTGGCGGGACACTaGCTGAAAGGCGACAACCTA +
Preference number: 4 (lower is better)
Translates to: RQGPQSSSLCLFQSGKHSKVAGH*LKGDNL
Trigger: TAGGTTGTCGCCTTTCAGGCAGTGTCCCGCCACCTT...GCTGTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp TGCTGGCCTCTGAGACGAGCTGGTTTGTTTCCATCCCTGAAGCCTTTGGACGAGAAGGTGGCGGGACACTaGCTGAAAGGCGACAACCTA +
Preference number: 4 (lower is better)
Translates to: CWPLRRAGLFPSLKPLDEKVAGH*LKGDNL
Trigger: TAGGTTGTCGCCTTTCAGGCAGTGTCCCGCCACCTT...CTCGTCCAAAGGCTTCAGGGATGGAAACAAACCAGCTCGTCTCAGAGGCCAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp AGTAAGGGTTTGGTGCAGGGCTCTGGAATGTCCAGAAGGAGCGGGAAGCAAAGGAAGGTGGCGGGACACTaGCTGAAAGGCGACAACCTA +
Preference number: 4 (lower is better)
Translates to: SKGLVQGSGMSRRSGKQRKVAGH*LKGDNL
Trigger: TAGGTTGTCGCCTTTCAGGCAGTGTCCCGCCACCTT...CCTTTGCTTCCCGCTCCTTCTGGACATTCCAGAGCCCTGCACCAAACCCTTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp AAGGTGGCGGGACACTGCCTGAAAGGCGACAACCTAGTGTGGCCACAAGAGAGTCCCTCACTGCAGATGTaGAGGTCAAACCCAAAGTGG +
Preference number: 4 (lower is better)
Translates to: KVAGHCLKGDNLVWPQESPSLQM*RSNPKW
Trigger: CCACTTTGGGTTTGACCTGCACATCTGCAGTGAGGG...ACTCTCTTGTGGCCACACTAGGTTGTCGCCTTTCAGGCAGTGTCCCGCCACCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR GCA 90 bp AATGTCCAGAAGGAGCGGGAAGCAAAGGTGGCGGGACACTGCCTGAAAGGCGACGAATTCTGCCCTCACTaGAGATGTGCAGGTCAAACC +
Preference number: 4 (lower is better)
Translates to: NVQKEREAKVAGHCLKGDEFCPH*RCAGQT
Trigger: GGTTTGACCTGCACATCTGCAGTGAGGGCAGAATTC...GTCGCCTTTCAGGCAGTGTCCCGCCACCTTTGCTTCCCGCTCCTTCTGGACATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR GCA 90 bp GAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGAGACAAGGGCCATCCAACAGGTAAATaGCTCACGACGGTGGTTTAT +
Preference number: 4 (lower is better)
Translates to: ERQAQHGSQGVFSLRDKGHPTGK*LTTVVY
Trigger: ATAAACCACCGTCGTGAGGCATTTACCTGTTGGATG...GCCCTTGTCTCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp GCTTCCAGGGCACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCATCACCCAAGCTGGAGTaGAGTGGCCCGATCTTGGTT +
Preference number: 4 (lower is better)
Translates to: ASRAQACDSDPYKTRQGPSPKLE*SGPILV
Trigger: AACCAAGATCGGGCCACTGCACTCCAGCTTGGGTGA...TGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTGCCCTGGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp GGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGACTTGCCTCTCCAAAGTaGAGTCTTTTATTTTCTCAG +
Preference number: 4 (lower is better)
Translates to: GLGIWGSPQLGCPGHPSGLASPK*SLLFSQ
Trigger: CTGAGAAAATAAAAGACTGCACTTTGGAGAGGCAAG...TCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp AATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAATCACCAGATAATCAATCAGGGTTaGCAGGGAAAGAGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: NMGEPPARLSGSPFWNHQIINQG*QGKRAG
Trigger: TCCTGCCCTCTTTCCCTGGCAACCCTGATTGATTAT...CTGGTGATTCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp GCTTCCAGGGCACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCAAGGCAAGGCTCCAGCTaGGACAAGGACTCCATCTTC +
Preference number: 4 (lower is better)
Translates to: ASRAQACDSDPYKTRQGPRQGSS*DKDSIF
Trigger: GAAGATGGAGTCCTTGTCGCAGCTGGAGCCTTGCCT...TGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTGCCCTGGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp TGTTTGTTTCAGAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAAGCATTCAGAGCCCCTaGACAGAGGACAGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: CLFQSGKHSMGVRGSSASSIQSP*TEDSSS
Trigger: AGAGGAGCTGTCCTCTGTGCAGGGGCTCTGAATGCT...TGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTCTGAAACAAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542249.5
CDS-3UTR GCA 90 bp GAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGAGACAAGGGCATCCGCTCCAGTGCTTaGTGGGAAATTAACAACTTG +
Preference number: 4 (lower is better)
Translates to: ERQAQHGSQGVFSLRDKGIRSSA*WEINNL
Trigger: CAAGTTGTTAATTTCCCAGCAAGCACTGGAGCGGAT...GCCCTTGTCTCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585266.5
CDS-3UTR CCA 90 bp CAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCGCTCTGCCAGCCAGGTaGAAGGATGACCGTCTGGCT +
Preference number: 4 (lower is better)
Translates to: QACDSDPYKTRQGPQSSSALPAR*KDDRLA
Trigger: AGCCAGACGGTCATCCTTCCACCTGGCTGGCAGAGC...GCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000585266.5
CDS-3UTR CCA 90 bp CATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGCTCTGCCAGCCAGGTaGAAGGATGACCGTCTGGCT +
Preference number: 4 (lower is better)
Translates to: HVTVTPTKLGKDHKVPASALPAR*KDDRLA
Trigger: AGCCAGACGGTCATCCTTCCACCTGGCTGGCAGAGC...AGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000585266.5
CDS-3UTR CCA 90 bp AGTAAGGGTTTGGTGCAGGGCTCTGGAATGTCCAGAAGGAGCGGGAAGCAAAGGTGGGACGTTCCCAGGTaGTCTCATTGGTGGTCGTGT +
Preference number: 4 (lower is better)
Translates to: SKGLVQGSGMSRRSGKQRWDVPR*SHWWSC
Trigger: ACACGACCACCAATGAGACCACCTGGGAACGTCCCA...CCTTTGCTTCCCGCTCCTTCTGGACATTCCAGAGCCCTGCACCAAACCCTTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR CCA 90 bp TGTTTCAGAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGAGAGGGGTCCCTGATGCGTaGTATCCATTCACTGTTGGA +
Preference number: 4 (lower is better)
Translates to: CFRAASTAWESGGLQPQRGVPDA*YPFTVG
Trigger: TCCAACAGTGAATGGATACCACGCATCAGGGACCCC...TCTCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTCTGAAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000585266.5
CDS-3UTR CCA 90 bp AGGGTTTGCCGATGTGCTCGTGTCTGTGAAGGGGTTGCTTCCGGTCATCTCCTTTTTCGGACACTCATGTaGGCAGTCTCTGGAGGGTGC +
Preference number: 4 (lower is better)
Translates to: RVCRCARVCEGVASGHLLFRTLM*AVSGGC
Trigger: GCACCCTCCAGAGACTGCCCACATGAGTGTCCGAAA...AAGGAGATGACCGGAAGCAACCCCTTCACAGACACGAGCACATCGGCAAACCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp TTTGTTTCAGAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGATTTCGGACACTCATGTaGGCAGTCTCTGGAGGGTGC +
Preference number: 4 (lower is better)
Translates to: FVSERQAQHGSQGVFSLRFRTLM*AVSGGC
Trigger: GCACCCTCCAGAGACTGCCCACATGAGTGTCCGAAA...TCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTCTGAAACAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000585266.5
CDS-3UTR CCA 90 bp AATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAATCACCAGTCTGGGAATCACCGGTaGATTTTCGGACACTCATGT +
Preference number: 4 (lower is better)
Translates to: NMGEPPARLSGSPFWNHQSGNHR*IFGHSC
Trigger: ACATGAGTGTCCGAAAATCCACCGGTGATTCCCAGA...CTGGTGATTCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000396115.6
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000579158.5
ENST00000585266.5
CDS-3UTR CCA 90 bp TGTTTGTTTCAGAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCATTCCGGCATCGTGTCTaGGTGAGGGAACGTCACACA +
Preference number: 4 (lower is better)
Translates to: CLFQSGKHSMGVRGSSASFRHRV*VRERHT
Trigger: TGTGTGACGTTCCCTCACCCAGACACGATGCCGGAA...TGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTCTGAAACAAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp AAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAAGCACAGCATGGGAGTCAGGGACGGTGCCGTTGCCTTaGGGGTCCTTCTTATCAGCC +
Preference number: 4 (lower is better)
Translates to: KVPASVCFRAASTAWESGTVPLP*GSFLSA
Trigger: GGCTGATAAGAAGGACCCCCAAGGCAACGGCACCGT...CCCTGACTCCCATGCTGTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp AATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAATCACCAGCCCTTCAGCTGTTTCTaGAGCAGTAGTTCAAACCCA +
Preference number: 4 (lower is better)
Translates to: NMGEPPARLSGSPFWNHQPFSCF*SSSSNP
Trigger: TGGGTTTGAACTACTGCTCCAGAAACAGCTGAAGGG...CTGGTGATTCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000579158.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp GTTGAATTCTGCCCTCACTGCAGATGTGCAGGTCAAACCCAAAGTGGTCAATGGCCGAGGCATAGCGGCTaGCGAGCTGCTTGCGAAGGT +
Preference number: 4 (lower is better)
Translates to: VEFCPHCRCAGQTQSGQWPRHSG*RAACEG
Trigger: ACCTTCGCAAGCAGCTCGCCAGCCGCTATGCCTCGG...CCATTGACCACTTTGGGTTTGACCTGCACATCTGCAGTGAGGGCAGAATTCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR CCA 90 bp TCCAGGGCACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAACGTCTCCAGCCTGTGTaGACTTTCTCCGCGCCTTCT +
Preference number: 4 (lower is better)
Translates to: SRAQACDSDPYKTRQGPQRLQPV*TFSAPS
Trigger: AGAAGGCGCGGAGAAAGTCCACACAGGCTGGAGACG...TTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTGCCCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp AATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAATCACCAGCTAGCTCCAATGTGGTaGTCACCATCTCTTCAAACC +
Preference number: 4 (lower is better)
Translates to: NMGEPPARLSGSPFWNHQLAPMW*SPSLQT
Trigger: GGTTTGAAGAGATGGTGACCACCACATTGGAGCTAG...CTGGTGATTCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000579158.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp CAGAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGAGACAAGGGCTCTAGCTCCAATGTaGTGGTCACCATCTCTTCAA +
Preference number: 4 (lower is better)
Translates to: QSGKHSMGVRGSSASETRALAPM*WSPSLQ
Trigger: TTGAAGAGATGGTGACCACCACATTGGAGCTAGAGC...CCTTGTCTCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp AATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAATCACCAGGCTCTAGCTCCAATGTaGTGGTCACCATCTCTTCAA +
Preference number: 4 (lower is better)
Translates to: NMGEPPARLSGSPFWNHQALAPM*WSPSLQ
Trigger: TTGAAGAGATGGTGACCACCACATTGGAGCTAGAGC...CTGGTGATTCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000579158.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp ATGGATTTCCAGGGCATGGGCTCCCGACTAGAATCTGCCCCTCGCTCATGCTTCACAGCTCCCTGTCTTTaGCCGGGTCCACTTTTCGAA +
Preference number: 4 (lower is better)
Translates to: MDFQGMGSRLESAPRSCFTAPCL*PGPLFE
Trigger: TTCGAAAAGTGGACCCGGCCAAAGACAGGGAGCTGT...GAAGCATGAGCGAGGGGCAGATTCTAGTCGGGAGCCCATGCCCTGGAAATCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR CCA 90 bp CTGTTTGTTTCAGAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCACAGCTCCCTGTCTTTaGCCGGGTCCACTTTTCGAA +
Preference number: 4 (lower is better)
Translates to: LFVSERQAQHGSQGVFSLTAPCL*PGPLFE
Trigger: TTCGAAAAGTGGACCCGGCCAAAGACAGGGAGCTGT...GAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTCTGAAACAAACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp GCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTCCGGGTCACCCTTCTaGAATCACCAGCTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: ACDSDPYKTRQGPQSSSLSGSPF*NHQLSP
Trigger: GGGAGAGAGCTGGTGATTCCAGAAGGGTGACCCGGA...GAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp AGGGCACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTGCGGCAAGCACAGCATaGGAGTCAGGGGGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: RAQACDSDPYKTRQGPQSAASTA*ESGGLQ
Trigger: CTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGC...ACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTGCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000583882.5
ENST00000585266.5
CDS-3UTR CCA 90 bp CATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGCGGCAAGCACAGCATaGGAGTCAGGGGGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: HVTVTPTKLGKDHKVPASAASTA*ESGGLQ
Trigger: CTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGC...AGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000583882.5
ENST00000585266.5
CDS-3UTR CCA 90 bp CAGATGGCGCCTGATCTCATGGGACACGATTCAGCGCTCAATTTGGGGCTAATTGCGGCAAGCACAGCATaGGAGTCAGGGGGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: QMAPDLMGHDSALNLGLIAASTA*ESGGLQ
Trigger: CTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGC...AATTAGCCCCAAATTGAGCGCTGAATCGTGTCCCATGAGATCAGGCGCCATCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp CTGTTTGTTTCAGAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCTCTGATCCTGACACCTaGCTTAGAGACAGAGCCCTC +
Preference number: 4 (lower is better)
Translates to: LFVSERQAQHGSQGVFSLSDPDT*LRDRAL
Trigger: GAGGGCTCTGTCTCTAAGCCAGGTGTCAGGATCAGA...GAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTCTGAAACAAACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp TCCAGAAATGTCTCTGGTTCGCATAGAGAGGTACCCAACTGGTCTCGGGACTCACAGGCATGGTGGGTCTaGGAAGACAGGAGCCAAGCC +
Preference number: 4 (lower is better)
Translates to: SRNVSGSHREVPNWSRDSQAWWV*EDRSQA
Trigger: GGCTTGGCTCCTGTCTTCCCAGACCCACCATGCCTG...TGAGTCCCGAGACCAGTTGGGTACCTCTCTATGCGAACCAGAGACATTTCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp GCACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCCAGGCATGGTGGGTCTaGGAAGACAGGAGCCAAGCC +
Preference number: 4 (lower is better)
Translates to: AQACDSDPYKTRQGPQSSQAWWV*EDRSQA
Trigger: GGCTTGGCTCCTGTCTTCCCAGACCCACCATGCCTG...GGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp CAAAGACTTGCCCTAACCCATCTCACATGTAGGACTGACCCGGCCCCATTAAGACCTCTCCAGGCATGGTaGGTCTGGGAAGACAGGAGC +
Preference number: 4 (lower is better)
Translates to: QRLALTHLTCRTDPAPLRPLQAW*VWEDRS
Trigger: GCTCCTGTCTTCCCAGACCCACCATGCCTGGAGAGG...TCTTAATGGGGCCGGGTCAGTCCTACATGTGAGATGGGTTAGGGCAAGTCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp AGGGCACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTCCTCTCCAGGCATGGTaGGTCTGGGAAGACAGGAGC +
Preference number: 4 (lower is better)
Translates to: RAQACDSDPYKTRQGPQSPLQAW*VWEDRS
Trigger: GCTCCTGTCTTCCCAGACCCACCATGCCTGGAGAGG...ACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp AGGGTTTGCCGATGTGCTCGTGTCTGTGAAGGGGTTGCTTCCGGTCATCTCCTTCAACCTGAGCTACCCTaGAAGACGCAAGAGGGCTCA +
Preference number: 4 (lower is better)
Translates to: RVCRCARVCEGVASGHLLQPELP*KTQEGS
Trigger: TGAGCCCTCTTGCGTCTTCCAGGGTAGCTCAGGTTG...AAGGAGATGACCGGAAGCAACCCCTTCACAGACACGAGCACATCGGCAAACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp CTGTTTGTTTCAGAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCGCTTCTCAGCATGCCTaGCTTGTCTTGAGCATTCGC +
Preference number: 4 (lower is better)
Translates to: LFVSERQAQHGSQGVFSLASQHA*LVLSIR
Trigger: GCGAATGCTCAAGACAAGCCAGGCATGCTGAGAAGC...GAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTCTGAAACAAACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp GGGCTCCCGACTAGAATCTGCCCCTCGCTCATGCTTCTCCCGGCCCCTTTAGACTCTTCTCAGTCGACATaGAGAATAGAGGAGAGCAGA +
Preference number: 4 (lower is better)
Translates to: GLPTRICPSLMLLPAPLDSSQST*RIEESR
Trigger: TCTGCTCTCCTCTATTCTCCATGTCGACTGAGAAGA...GTCTAAAGGGGCCGGGAGAAGCATGAGCGAGGGGCAGATTCTAGTCGGGAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp GACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAAGCACAGCATGGGAGGCAGTGGCCCGATCTTaGTTCACTGCAATCTCCGCC +
Preference number: 4 (lower is better)
Translates to: DHKVPASVCFRAASTAWEAVARS*FTAISA
Trigger: GGCGGAGATTGCAGTGAACCAAGATCGGGCCACTGC...CTCCCATGCTGTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp GCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCGCAGTGGCCCGATCTTaGTTCACTGCAATCTCCGCC +
Preference number: 4 (lower is better)
Translates to: ACDSDPYKTRQGPQSSSLAVARS*FTAISA
Trigger: GGCGGAGATTGCAGTGAACCAAGATCGGGCCACTGC...GAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp TCCAGGGCACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAACATCAGTCTCCTGGGTaGAGGCAGGTAGAAGGGGCT +
Preference number: 4 (lower is better)
Translates to: SRAQACDSDPYKTRQGPQHQSPG*RQVEGA
Trigger: AGCCCCTTCTACCTGCCTCCACCCAGGAGACTGATG...TTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTGCCCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp GTGGGTCTGTCTTCTGGGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCTTCCAAAAGGGACTTTaGCTCAGCCCAGATTTTTCT +
Preference number: 4 (lower is better)
Translates to: VGLSSGPGNMGEPPARLSFQKGL*LSPDFS
Trigger: AGAAAAATCTGGGCTGAGCCAAAGTCCCTTTTGGAA...GGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCCCAGAAGACAGACCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp GCTTCCAGGGCACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCATGTGACACTGAAGCCTaGGTCCCAGAAGGGAGCAGA +
Preference number: 4 (lower is better)
Translates to: ASRAQACDSDPYKTRQGPCDTEA*VPEGSR
Trigger: TCTGCTCCCTTCTGGGACCCAGGCTTCAGTGTCACA...TGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTGCCCTGGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp AATGTCCAGAAGGAGCGGGAAGCAAAGGTGGCGGGACACTGCCTGAAAGGCGACGCCCTAATCTTCACCTaGCCTGGATCCAGAAATGTC +
Preference number: 4 (lower is better)
Translates to: NVQKEREAKVAGHCLKGDALIFT*PGSRNV
Trigger: GACATTTCTGGATCCAGGCCAGGTGAAGATTAGGGC...GTCGCCTTTCAGGCAGTGTCCCGCCACCTTTGCTTCCCGCTCCTTCTGGACATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp CATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTAACCCAGCAGAGTCCTaGCAGCCTCTTCGGCTCCCT +
Preference number: 4 (lower is better)
Translates to: HVTVTPTKLGKDHKVPASNPAES*QPLRLP
Trigger: AGGGAGCCGAAGAGGCTGCCAGGACTCTGCTGGGTT...AGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp ACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCACGGGGTGAGGAGTGCTaGCGGGAGACACGGCTCTTT +
Preference number: 4 (lower is better)
Translates to: TKLGKDHKVPASVCFRAARGEEC*RETRLF
Trigger: AAAGAGCCGTGTCTCCCGCCAGCACTCCTCACCCCG...TGCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp AATTCTGCCCTCACTGCAGATGTGCAGGTCAAACCCAAAGTGGTCAATGGGAAATGGTGCGGGGGCAGGTaGGTTACAGCCTCCACTGGG +
Preference number: 4 (lower is better)
Translates to: NSALTADVQVKPKVVNGKWCGGR*VTASTG
Trigger: CCCAGTGGAGGCTGTAACCCACCTGCCCCCGCACCA...TTTCCCATTGACCACTTTGGGTTTGACCTGCACATCTGCAGTGAGGGCAGAATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp AAAATCTTGTTGCTGTCTACCTTCCATCCAACAGGTAAATGCCTCACGACGGTGAGCGAGCGCCGGACATaGCCTTGGCGCCCGGGTTCA +
Preference number: 4 (lower is better)
Translates to: KILLLSTFHPTGKCLTTVSERRT*PWRPGS
Trigger: TGAACCCGGGCGCCAAGGCCATGTCCGGCGCTCGCT...CACCGTCGTGAGGCATTTACCTGTTGGATGGAAGGTAGACAGCAACAAGATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432992.7
CDS-3UTR CCA 90 bp TTTGTTTCAGAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGAACAGCTAACCTTCTCTaGGGGCTGCTACCTCAGAGG +
Preference number: 4 (lower is better)
Translates to: FVSERQAQHGSQGVFSLRTANLL*GLLPQR
Trigger: CCTCTGAGGTAGCAGCCCCCAGAGAAGGTTAGCTGT...TCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTCTGAAACAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585266.5
CDS-3UTR TCA 90 bp CACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCATCAGGGTCCCGTTTCTaGCTGGGGTGCCACCACCAA +
Preference number: 4 (lower is better)
Translates to: HKHVTVTPTKLGKDHKVPSGSRF*LGCHHQ
Trigger: TTGGTGGTGGCACCCCAGTCAGAAACGGGACCCTGA...TGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000323816.8
CDS-3UTR TCA 90 bp GCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAAGCACAGCATCATTGGTGGTCGTGTTaGCATAGTACCGCCGGCCCT +
Preference number: 4 (lower is better)
Translates to: ARTTKFQPLFVSERQAQHHWWSC*HSTAGP
Trigger: AGGGCCGGCGGTACTATGTCAACACGACCACCAATG...ATGCTGTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000585266.5
CDS-3UTR TCA 90 bp GAAAACTGTACAAGGGACAGCAGTCCCAGCCCTGCCATACACAAGAAGACAGAGCATTGGTGGTCGTGTTaGCATAGTACCGCCGGCCCT +
Preference number: 4 (lower is better)
Translates to: ENCTRDSSPSPAIHKKTEHWWSC*HSTAGP
Trigger: AGGGCCGGCGGTACTATGTCAACACGACCACCAATG...CTCTGTCTTCTTGTGTATGGCAGGGCTGGGACTGCTGTCCCTTGTACAGTTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR TCA 90 bp TGCTGGCCTCTGAGACGAGCTGGTTTGTTTCCATCCCTGAAGCCTTTGGACGAGCTTTTTGCTTGGCGATaGGGATCCCAGGTTCTGGGA +
Preference number: 4 (lower is better)
Translates to: CWPLRRAGLFPSLKPLDELFAWR*GSQVLG
Trigger: TCCCAGAACCTGGGATCCTCATCGCCAAGCAAAAAG...CTCGTCCAAAGGCTTCAGGGATGGAAACAAACCAGCTCGTCTCAGAGGCCAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR TCA 90 bp AGTAAGGGTTTGGTGCAGGGCTCTGGAATGTCCAGAAGGAGCGGGAAGCAAAGGCTTTTTGCTTGGCGATaGGGATCCCAGGTTCTGGGA +
Preference number: 4 (lower is better)
Translates to: SKGLVQGSGMSRRSGKQRLFAWR*GSQVLG
Trigger: TCCCAGAACCTGGGATCCTCATCGCCAAGCAAAAAG...CCTTTGCTTCCCGCTCCTTCTGGACATTCCAGAGCCCTGCACCAAACCCTTACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR TCA 90 bp TTTGTTTCAGAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGACTTTTTGCTTGGCGATaGGGATCCCAGGTTCTGGGA +
Preference number: 4 (lower is better)
Translates to: FVSERQAQHGSQGVFSLRLFAWR*GSQVLG
Trigger: TCCCAGAACCTGGGATCCTCATCGCCAAGCAAAAAG...TCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTCTGAAACAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000585266.5
CDS-3UTR TCA 90 bp CTGAGACGAGCTGGTTTGTTTCCATCCCTGAAGCCTTTGGACGAGCTGGATGAGGGAGCCTTCCTCCTGTaGAGCCAAGGAGTTCTGAGA +
Preference number: 4 (lower is better)
Translates to: LRRAGLFPSLKPLDELDEGAFLL*SQGVLR
Trigger: TCTCAGAACTCCTTGGCTTCACAGGAGGAAGGCTCC...CTCATCCAGCTCGTCCAAAGGCTTCAGGGATGGAAACAAACCAGCTCGTCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR TCA 90 bp GCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCGCAGAGAACTTGAGGTaGACTTCTGCTTCGTCCGCC +
Preference number: 4 (lower is better)
Translates to: ACDSDPYKTRQGPQSSSLAENLR*TSASSA
Trigger: GGCGGACGAAGCAGAAGTTCACCTCAAGTTCTCTGC...GAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR TCA 90 bp TTTGTTTCAGAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGATCTTGTTGCTCAGCTTaGTCTCCAGCTGCTGGGTCT +
Preference number: 4 (lower is better)
Translates to: FVSERQAQHGSQGVFSLRSCCSA*SPAAGS
Trigger: AGACCCAGCAGCTGGAGATCAAGCTGAGCAACAAGA...TCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTCTGAAACAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR TCA 90 bp CCGACTAGAATCTGCCCCTCGCTCATGCTTCTCCCGGCCCCTTTAGACTCTTTATCTTGTTGCTCAGCTTaGTCTCCAGCTGCTGGGTCT +
Preference number: 4 (lower is better)
Translates to: PTRICPSLMLLPAPLDSLSCCSA*SPAAGS
Trigger: AGACCCAGCAGCTGGAGATCAAGCTGAGCAACAAGA...TAAAGAGTCTAAAGGGGCCGGGAGAAGCATGAGCGAGGGGCAGATTCTAGTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR TCA 90 bp GCTTCCAGGGCACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCATTCTCCGCGCCTTCTTaGTGTCCTCCTCTGTCTTGT +
Preference number: 4 (lower is better)
Translates to: ASRAQACDSDPYKTRQGPFSAPS*CPPLSC
Trigger: ACAAGACAGAGGAGGACATCAAGAAGGCGCGGAGAA...TGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTGCCCTGGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR TCA 90 bp CACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGATCCACACAGCGCATaGGGTCGTCTCCAGCCTGTG +
Preference number: 4 (lower is better)
Translates to: HKHVTVTPTKLGKDHKVPDPHSA*GRLQPV
Trigger: CACAGGCTGGAGACGACCTCATGCGCTGTGTGGATC...TGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR TCA 90 bp GGATCCAGAAATGTCTCTGGTTCGCATAGAGAGGTACCCAACTGGTCTCGGGACACTTTTCGAAGCAGCTaGTCCACGGGCTCGACTGTG +
Preference number: 4 (lower is better)
Translates to: GSRNVSGSHREVPNWSRDTFRSS*STGSTV
Trigger: CACAGTCGAGCCCGTGGATCAGCTGCTTCGAAAAGT...GTCCCGAGACCAGTTGGGTACCTCTCTATGCGAACCAGAGACATTTCTGGATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp GCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCACTTTTCGAAGCAGCTaGTCCACGGGCTCGACTGTG +
Preference number: 4 (lower is better)
Translates to: ACDSDPYKTRQGPQSSSLTFRSS*STGSTV
Trigger: CACAGTCGAGCCCGTGGATCAGCTGCTTCGAAAAGT...GAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR TCA 90 bp AGGGCACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTCCGTCTTGTGCTCTCTaGCCCACAGCTCCCTGTCTT +
Preference number: 4 (lower is better)
Translates to: RAQACDSDPYKTRQGPQSPSCAL*PTAPCL
Trigger: AAGACAGGGAGCTGTGGGTCAGAGAGCACAAGACGG...ACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR TCA 90 bp GAAAACTGTACAAGGGACAGCAGTCCCAGCCCTGCCATACACAAGAAGACAGAGGGTGCGGCTGTGAGCTaGATGGCACCTTCTACCCAT +
Preference number: 4 (lower is better)
Translates to: ENCTRDSSPSPAIHKKTEGAAVS*MAPSTH
Trigger: ATGGGTAGAAGGTGCCATTCAGCTCACAGCCGCACC...CTCTGTCTTCTTGTGTATGGCAGGGCTGGGACTGCTGTCCCTTGTACAGTTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR TCA 90 bp GACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAAGCACAGCATGGGAGTTCTGGGTGCGGCTGTaGGCTGAATGGCACCTTCTA +
Preference number: 4 (lower is better)
Translates to: DHKVPASVCFRAASTAWEFWVRL*AEWHLL
Trigger: TAGAAGGTGCCATTCAGCTCACAGCCGCACCCAGAA...CTCCCATGCTGTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR TCA 90 bp GATCCTGACACCTGGCTTAGAGACAGAGCCCTCCCTACCCTGATCCTCCAAAGCGTGATGAACAGTGGCTaGGAAAGCCAGATGTGGACT +
Preference number: 4 (lower is better)
Translates to: DPDTWLRDRALPTLILQSVMNSG*ESQMWT
Trigger: AGTCCACATCTGGCTTTCTCAGCCACTGTTCATCAC...GCTTTGGAGGATCAGGGTAGGGAGGGCTCTGTCTCTAAGCCAGGTGTCAGGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR TCA 90 bp GCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAAGCACAGCATGAGGTAGTTCCATCCTaGCCTCTCCAGGCATGGTGG +
Preference number: 4 (lower is better)
Translates to: ARTTKFQPLFVSERQAQHEVVPS*PLQAWW
Trigger: CCACCATGCCTGGAGAGGTCAGGATGGAACTACCTC...ATGCTGTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR TCA 90 bp CATGATTCTGATCCTGACACCTGGCTTAGAGACAGAGCCCTCCCTACCCTGATCCAGCTTGCTGGCCTCTaGGACGAGCTGGTTTGTTTC +
Preference number: 4 (lower is better)
Translates to: HDSDPDTWLRDRALPTLIQLAGL*DELVCF
Trigger: GAAACAAACCAGCTCGTCTCAGAGGCCAGCAAGCTG...GATCAGGGTAGGGAGGGCTCTGTCTCTAAGCCAGGTGTCAGGATCAGAATCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR TCA 90 bp GAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGAGACAAGGGCGGTCAATGGGAAAGATaGAGAAAGATGGATTTCCAG +
Preference number: 4 (lower is better)
Translates to: ERQAQHGSQGVFSLRDKGGQWER*RKMDFQ
Trigger: CTGGAAATCCATCTTTCTTCATCTTTCCCATTGACC...GCCCTTGTCTCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR TCA 90 bp GGGCTCCCGACTAGAATCTGCCCCTCGCTCATGCTTCTCCCGGCCCCTTTAGACGGTCAATGGGAAAGATaGAGAAAGATGGATTTCCAG +
Preference number: 4 (lower is better)
Translates to: GLPTRICPSLMLLPAPLDGQWER*RKMDFQ
Trigger: CTGGAAATCCATCTTTCTTCATCTTTCCCATTGACC...GTCTAAAGGGGCCGGGAGAAGCATGAGCGAGGGGCAGATTCTAGTCGGGAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR TCA 90 bp GACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAAGCACAGCATGGGAGGATCACGGGCTTCCCTaGCGACAGGGCCATTATAGT +
Preference number: 4 (lower is better)
Translates to: DHKVPASVCFRAASTAWEDHGLP*RQGHYS
Trigger: ACTATAATGGCCCTGTCGTCAGGGAAGCCCGTGATC...CTCCCATGCTGTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp CGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAAGCACAGCCAATGCCAAGGTTGCTaGCCGGTAAGACCCCTGAAA +
Preference number: 4 (lower is better)
Translates to: RQGPQSSSLCLFQSGKHSQCQGC*PVRPLK
Trigger: TTTCAGGGGTCTTACCGGTCAGCAACCTTGGCATTG...GCTGTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp GTGGAGGAAACACATTCATACCGGGGTGAGGAGTGCTGGCGGGAGACACGGCTCGGTCTGGTGACCAGGTaGTTAAAATCTTGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: VEETHSYRGEECWRETRLGLVTR*LKSCCC
Trigger: ACAGCAACAAGATTTTAATCACCTGGTCACCAGACC...GAGCCGTGTCTCCCGCCAGCACTCCTCACCCCGGTATGAATGTGTTTCCTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp GACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGATTGGATATGGGCCGTaGGGGTCTGGTGACCAGGTG +
Preference number: 4 (lower is better)
Translates to: DSDPYKTRQGPQSSSLCLIGYGP*GSGDQV
Trigger: CACCTGGTCACCAGACCCTCACGGCCCATATCCAAT...CAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp CAGAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGAGACAAGGCTCACTGGTTACCCTTaGGCTTCACTTTCCTATTTG +
Preference number: 4 (lower is better)
Translates to: QSGKHSMGVRGSSASETRLTGYP*ASLSYL
Trigger: CAAATAGGAAAGTGAAGCTCAAGGGTAACCAGTGAG...CCTTGTCTCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp GACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTGGCCAACAGGGTGCTaGGTGGAGGTAGAAAGGAGG +
Preference number: 4 (lower is better)
Translates to: DSDPYKTRQGPQSSSLCLWPTGC*VEVERR
Trigger: CCTCCTTTCTACCTCCACTCAGCACCCTGTTGGCCA...CAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp AAGGTGGCGGGACACTGCCTGAAAGGCGACAACCTAGTGTGGCCACAAGAGAGTGCTGTTTATCAATCCTaGCTAGCAGAGCACTGCCTC +
Preference number: 4 (lower is better)
Translates to: KVAGHCLKGDNLVWPQESAVYQS*LAEHCL
Trigger: GAGGCAGTGCTCTGCTAGTCAGGATTGATAAACAGC...ACTCTCTTGTGGCCACACTAGGTTGTCGCCTTTCAGGCAGTGTCCCGCCACCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp TGTTTCAGAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGAGAGCTGTTTATCAATCCTaGCTAGCAGAGCACTGCCTC +
Preference number: 4 (lower is better)
Translates to: CFRAASTAWESGGLQPQRAVYQS*LAEHCL
Trigger: GAGGCAGTGCTCTGCTAGTCAGGATTGATAAACAGC...TCTCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTCTGAAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp TGCTGGCCTCTGAGACGAGCTGGTTTGTTTCCATCCCTGAAGCCTTTGGACGAGGTCGTGCAAACAAGTTaGAGACCCTGGGCCAAGAAC +
Preference number: 4 (lower is better)
Translates to: CWPLRRAGLFPSLKPLDEVVQTS*RPWAKN
Trigger: GTTCTTGGCCCAGGGTCTTCAACTTGTTTGCACGAC...CTCGTCCAAAGGCTTCAGGGATGGAAACAAACCAGCTCGTCTCAGAGGCCAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp TTTGTTTCAGAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGAGTCGTGCAAACAAGTTaGAGACCCTGGGCCAAGAAC +
Preference number: 4 (lower is better)
Translates to: FVSERQAQHGSQGVFSLRVVQTS*RPWAKN
Trigger: GTTCTTGGCCCAGGGTCTTCAACTTGTTTGCACGAC...TCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTCTGAAACAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp CGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAAGCACAGCCAGTTGCCGGTGGCCTaGGACACTCATCTAGAACAA +
Preference number: 4 (lower is better)
Translates to: RQGPQSSSLCLFQSGKHSQLPVA*DTHLEQ
Trigger: TTGTTCTAGATGAGTGTCTCAGGCCACCGGCAACTG...GCTGTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp GGAAGAGCCTTGGGGCTTCCAGGGCACAAGCATGTGACAGTGACCCCTACAAAAACTGAGCAGGGGGCATaGACAAGACACAGCTTAGTG +
Preference number: 4 (lower is better)
Translates to: GRALGLPGHKHVTVTPTKTEQGA*TRHSLV
Trigger: CACTAAGCTGTGTCTTGTTCATGCCCCCTGCTCAGT...TTTTGTAGGGGTCACTGTCACATGCTTGTGCCCTGGAAGCCCCAAGGCTCTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp GGAAGAGCCTTGGGGCTTCCAGGGCACAAGCATGTGACAGTGACCCCTACAAAAACCAAGGAACAGTCCTaGACACCACACGCAATCTCC +
Preference number: 4 (lower is better)
Translates to: GRALGLPGHKHVTVTPTKTKEQS*TPHAIS
Trigger: GGAGATTGCGTGTGGTGTTCAGGACTGTTCCTTGGT...TTTTGTAGGGGTCACTGTCACATGCTTGTGCCCTGGAAGCCCCAAGGCTCTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp CACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCATGGCTGGCGTCCCTTTaGATGTCTGTCCCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: HKHVTVTPTKLGKDHKVPWLASL*MSVPGS
Trigger: GGACCCAGGGACAGACATTCAAAGGGACGCCAGCCA...TGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp AAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAAGCACAGCATGGGAGTCAGGGCTTCCTACAGTAGCGTaGCATTGGGAAGTCTGCGGC +
Preference number: 4 (lower is better)
Translates to: KVPASVCFRAASTAWESGLPTVA*HWEVCG
Trigger: GCCGCAGACTTCCCAATGTCACGCTACTGTAGGAAG...CCCTGACTCCCATGCTGTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542249.5
CDS-3UTR TCA 90 bp GCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCCTTTTTGCTTGGCGATaGGGATCCCAGGTTCTGGGG +
Preference number: 4 (lower is better)
Translates to: ACDSDPYKTRQGPQSSSLLFAWR*GSQVLG
Trigger: CCCCAGAACCTGGGATCCTCATCGCCAAGCAAAAAG...GAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000580865.5
ENST00000583882.5
CDS-3UTR GCA 90 bp GTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTGAATCCCAGGAGAACTaGTGGGACGTTCCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: VTVTPTKLGKDHKVPASVESQEN*WDVPRW
Trigger: CCACCTGGGAACGTCCCAGCAGTTCTCCTGGGATTC...AACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000585266.5
CDS-3UTR GCA 90 bp CTGTTTGTTTCAGAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCCCTTGCTCTGCTTTTTaGTTGGCGATGAGGATCCCA +
Preference number: 4 (lower is better)
Translates to: LFVSERQAQHGSQGVFSLPCSAF*LAMRIP
Trigger: TGGGATCCTCATCGCCAAGCAAAAAGCAGAGCAAGG...GAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTCTGAAACAAACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp AATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAATCACCAGGTGTTTTCCTTGCTCTaGTTTTTGCTTGGCGATGAG +
Preference number: 4 (lower is better)
Translates to: NMGEPPARLSGSPFWNHQVFSLL*FLLGDE
Trigger: CTCATCGCCAAGCAAAAAGCAGAGCAAGGAAAACAC...CTGGTGATTCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 8 transcripts:
ENST00000323816.8
ENST00000396115.6
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000579158.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp CCGACTAGAATCTGCCCCTCGCTCATGCTTCTCCCGGCCCCTTTAGACTCTTTAGTTGGTTTCAGCAGCTaGTGTTCCGGCATCGTGTCT +
Preference number: 4 (lower is better)
Translates to: PTRICPSLMLLPAPLDSLVGFSS*CSGIVS
Trigger: AGACACGATGCCGGAACAGCAGCTGCTGAAACCAAC...TAAAGAGTCTAAAGGGGCCGGGAGAAGCATGAGCGAGGGGCAGATTCTAGTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR GCA 90 bp GCTTCCAGGGCACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCAGTTGGTTTCAGCAGCTaGTGTTCCGGCATCGTGTCT +
Preference number: 4 (lower is better)
Translates to: ASRAQACDSDPYKTRQGPVGFSS*CSGIVS
Trigger: AGACACGATGCCGGAACAGCAGCTGCTGAAACCAAC...TGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTGCCCTGGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000583882.5
ENST00000585266.5
CDS-3UTR GCA 90 bp ACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGACAAACCCAGCCACGGTaGCGTTGCCTTGGGGGTCCT +
Preference number: 4 (lower is better)
Translates to: TPTKLGKDHKVPASVCFRQTQPR*RCLGGP
Trigger: AGGACCCCCAAGGCAACGGCACCGTGGCTGGGTTTG...TCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp AATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAATCACCAGCCTTCTGCATTTGTTTaGCCTTCAGCTGTTTCTGGA +
Preference number: 4 (lower is better)
Translates to: NMGEPPARLSGSPFWNHQPSAFV*PSAVSG
Trigger: TCCAGAAACAGCTGAAGGGCAAACAAATGCAGAAGG...CTGGTGATTCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000579158.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp AGTAAGGGTTTGGTGCAGGGCTCTGGAATGTCCAGAAGGAGCGGGAAGCAAAGGCTTGAGGTGAACTTCTaGTTCGTCCGCCAGGCTCTT +
Preference number: 4 (lower is better)
Translates to: SKGLVQGSGMSRRSGKQRLEVNF*FVRQAL
Trigger: AAGAGCCTGGCGGACGAAGCAGAAGTTCACCTCAAG...CCTTTGCTTCCCGCTCCTTCTGGACATTCCAGAGCCCTGCACCAAACCCTTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp ACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAGGCTGGCGAGCTGCTTaGGAAGGTCGGCAATGTGGT +
Preference number: 4 (lower is better)
Translates to: TKLGKDHKVPASVCFRAAGWRAA*EGRQCG
Trigger: ACCACATTGCCGACCTTCGCAAGCAGCTCGCCAGCC...TGCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp GCACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCGTTTCATGCCGCAGCTaGGTGTACTGGCACAGGTGC +
Preference number: 4 (lower is better)
Translates to: AQACDSDPYKTRQGPQSSVSCRS*VYWHRC
Trigger: GCACCTGTGCCAGTACACGCAGCTGCGGCATGAAAC...GGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp CAGATGGCGCCTGATCTCATGGGACACGATTCAGCGCTCAATTTGGGGCTAATTGTTTCATGCCGCAGCTaGGTGTACTGGCACAGGTGC +
Preference number: 4 (lower is better)
Translates to: QMAPDLMGHDSALNLGLIVSCRS*VYWHRC
Trigger: GCACCTGTGCCAGTACACGCAGCTGCGGCATGAAAC...AATTAGCCCCAAATTGAGCGCTGAATCGTGTCCCATGAGATCAGGCGCCATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp AAGGTGGCGGGACACTGCCTGAAAGGCGACAACCTAGTGTGGCCACAAGAGAGTAACATGTCTGTTTCATaGCGCAGCTGCGTGTACTGG +
Preference number: 4 (lower is better)
Translates to: KVAGHCLKGDNLVWPQESNMSVS*RSCVYW
Trigger: CCAGTACACGCAGCTGCGGCATGAAACAGACATGTT...ACTCTCTTGTGGCCACACTAGGTTGTCGCCTTTCAGGCAGTGTCCCGCCACCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp AAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAAGCACAGCATGGGAGTCAGGGATGTTGCCCGTCTTGTaGTCTCTGACCCACAGCTCC +
Preference number: 4 (lower is better)
Translates to: KVPASVCFRAASTAWESGMLPVL*SLTHSS
Trigger: GGAGCTGTGGGTCAGAGAGCACAAGACGGGCAACAT...CCCTGACTCCCATGCTGTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp AAAATCTTGTTGCTGTCTACCTTCCATCCAACAGGTAAATGCCTCACGACGGTGAGGGCAGCCCAAAGGTaGACAGGGCACCGTGGCGGA +
Preference number: 4 (lower is better)
Translates to: KILLLSTFHPTGKCLTTVRAAQR*TGHRGG
Trigger: TCCGCCACGGTGCCCTGTGCACCTTTGGGCTGCCCT...CACCGTCGTGAGGCATTTACCTGTTGGATGGAAGGTAGACAGCAACAAGATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp ATGGATTTCCAGGGCATGGGCTCCCGACTAGAATCTGCCCCTCGCTCATGCTTCGGGATGGCAAAGACTTaGCCTAACCCATCTCACATG +
Preference number: 4 (lower is better)
Translates to: MDFQGMGSRLESAPRSCFGMAKT*PNPSHM
Trigger: CATGTGAGATGGGTTAGGGCAAGTCTTTGCCATCCC...GAAGCATGAGCGAGGGGCAGATTCTAGTCGGGAGCCCATGCCCTGGAAATCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR GCA 90 bp TTTGTTTCAGAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGACAGCAGTCCCAGCCCTaGCATACACAAGAAGACAGA +
Preference number: 4 (lower is better)
Translates to: FVSERQAQHGSQGVFSLRQQSQP*HTQEDR
Trigger: TCTGTCTTCTTGTGTATGGCAGGGCTGGGACTGCTG...TCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTCTGAAACAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp CAGAAACGGGCCCCTGTTCATACGGATAGGGGTTCTGGACTGTTGACTCTAGCCGCTATGCCTGTCCAGTaGCCACCAGTGACAGAAAAC +
Preference number: 4 (lower is better)
Translates to: QKRAPVHTDRGSGLLTLAAMPVQ*PPVTEN
Trigger: GTTTTCTGTCACTGGTGGGCACTGGACAGGCATAGC...GGCTAGAGTCAACAGTCCAGAACCCCTATCCGTATGAACAGGGGCCCGTTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp AATGTCCAGAAGGAGCGGGAAGCAAAGGTGGCGGGACACTGCCTGAAAGGCGACGTGCTTGTTGAATTCTaGCCTCACTGCAGATGTGCA +
Preference number: 4 (lower is better)
Translates to: NVQKEREAKVAGHCLKGDVLVEF*PHCRCA
Trigger: TGCACATCTGCAGTGAGGGCAGAATTCAACAAGCAC...GTCGCCTTTCAGGCAGTGTCCCGCCACCTTTGCTTCCCGCTCCTTCTGGACATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR GCA 90 bp CCGACTAGAATCTGCCCCTCGCTCATGCTTCTCCCGGCCCCTTTAGACTCTTTAACAACCCGGATAGCGTaGTTGCCTCTCCAAAGTGCA +
Preference number: 4 (lower is better)
Translates to: PTRICPSLMLLPAPLDSLTTRIA*LPLQSA
Trigger: TGCACTTTGGAGAGGCAAGCACGCTATCCGGGTTGT...TAAAGAGTCTAAAGGGGCCGGGAGAAGCATGAGCGAGGGGCAGATTCTAGTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp GGAAGAGCCTTGGGGCTTCCAGGGCACAAGCATGTGACAGTGACCCCTACAAAACAGCCTTCTTGTCCATaGTGCTTCTGCTCGCCTTTC +
Preference number: 4 (lower is better)
Translates to: GRALGLPGHKHVTVTPTKQPSCP*CFCSPF
Trigger: GAAAGGCGAGCAGAAGCAGCATGGACAAGAAGGCTG...TTTTGTAGGGGTCACTGTCACATGCTTGTGCCCTGGAAGCCCCAAGGCTCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp GACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAAGCACAGCATGGGAGAGGCAAGGCTCCAGCTaGGACAAGGACTCCATCTTC +
Preference number: 4 (lower is better)
Translates to: DHKVPASVCFRAASTAWERQGSS*DKDSIF
Trigger: GAAGATGGAGTCCTTGTCGCAGCTGGAGCCTTGCCT...CTCCCATGCTGTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp AAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAAGCACAGCATGGGAGTCAGGGGAGAGAGCACCCACGTaGCCTGACCTTACATTCCAC +
Preference number: 4 (lower is better)
Translates to: KVPASVCFRAASTAWESGERAPT*PDLTFH
Trigger: GTGGAATGTAAGGTCAGGGCACGTGGGTGCTCTCTC...CCCTGACTCCCATGCTGTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp TACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCCGTGACCTCCGGGGTTaGGTGAGCATGAGCAGTGAG +
Preference number: 4 (lower is better)
Translates to: YKTRQGPQSSSLCLFQSGRDLRG*VSMSSE
Trigger: CTCACTGCTCATGCTCACGCAACCCCGGAGGTCACG...GCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542249.5
CDS-3UTR CCA 90 bp GAAAACTGTACAAGGGACAGCAGTCCCAGCCCTGCCATACACAAGAAGACAGAGGGAAGGATGACCGTCTaGCTTTCTTCTCCCGGCGGA +
Preference number: 4 (lower is better)
Translates to: ENCTRDSSPSPAIHKKTEGRMTV*LSSPGG
Trigger: TCCGCCGGGAGAAGAAAGCCAGACGGTCATCCTTCC...CTCTGTCTTCTTGTGTATGGCAGGGCTGGGACTGCTGTCCCTTGTACAGTTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR CCA 90 bp CAGATGGCGCCTGATCTCATGGGACACGATTCAGCGCTCAATTTGGGGCTAATTAGAGCCAGGGCTGGCTaGAATCCCAGGAGAACTGCT +
Preference number: 4 (lower is better)
Translates to: QMAPDLMGHDSALNLGLIRARAG*NPRRTA
Trigger: AGCAGTTCTCCTGGGATTCCAGCCAGCCCTGGCTCT...AATTAGCCCCAAATTGAGCGCTGAATCGTGTCCCATGAGATCAGGCGCCATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR CCA 90 bp ACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAAGCACAGCATGGGAGTAGAGCCAGGGCTGGCTaGAATCCCAGGAGAACTGCT +
Preference number: 4 (lower is better)
Translates to: TTKFQPLFVSERQAQHGSRARAG*NPRRTA
Trigger: AGCAGTTCTCCTGGGATTCCAGCCAGCCCTGGCTCT...ACTCCCATGCTGTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000585266.5
CDS-3UTR CCA 90 bp AGTAAGGGTTTGGTGCAGGGCTCTGGAATGTCCAGAAGGAGCGGGAAGCAAAGGGGGGTCCCTGATGCGTaGTATCCATTCACTGTTGGA +
Preference number: 4 (lower is better)
Translates to: SKGLVQGSGMSRRSGKQRGVPDA*YPFTVG
Trigger: TCCAACAGTGAATGGATACCACGCATCAGGGACCCC...CCTTTGCTTCCCGCTCCTTCTGGACATTCCAGAGCCCTGCACCAAACCCTTACT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR CCA 90 bp TGTCCAGAAGGAGCGGGAAGCAAAGGTGGCGGGACACTGCCTGAAAGGCGACAATCTGGGAATCACCGGTaGATTTTCGGACACTCATGT +
Preference number: 4 (lower is better)
Translates to: CPEGAGSKGGGTLPERRQSGNHR*IFGHSC
Trigger: ACATGAGTGTCCGAAAATCCACCGGTGATTCCCAGA...TTGTCGCCTTTCAGGCAGTGTCCCGCCACCTTTGCTTCCCGCTCCTTCTGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR CCA 90 bp GACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAAGCACAGCATGGGAGTTCCGGCATCGTGTCTaGGTGAGGGAACGTCACACA +
Preference number: 4 (lower is better)
Translates to: DHKVPASVCFRAASTAWEFRHRV*VRERHT
Trigger: TGTGTGACGTTCCCTCACCCAGACACGATGCCGGAA...CTCCCATGCTGTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp CATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTACGGTGCCGTTGCCTTaGGGGTCCTTCTTATCAGCC +
Preference number: 4 (lower is better)
Translates to: HVTVTPTKLGKDHKVPASTVPLP*GSFLSA
Trigger: GGCTGATAAGAAGGACCCCCAAGGCAACGGCACCGT...AGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp TGGGGGAAGGATGGATTGGCATTTCCAGAGGAGACTTTACAGATGGCGCCTGATACGGTGCCGTTGCCTTaGGGGTCCTTCTTATCAGCC +
Preference number: 4 (lower is better)
Translates to: WGKDGLAFPEETLQMAPDTVPLP*GSFLSA
Trigger: GGCTGATAAGAAGGACCCCCAAGGCAACGGCACCGT...ATCAGGCGCCATCTGTAAAGTCTCCTCTGGAAATGCCAATCCATCCTTCCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp CTGTTTGTTTCAGAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGGTCGGCAATGTGGTaGTCGCACTTCTTCATGTCT +
Preference number: 4 (lower is better)
Translates to: LFVSERQAQHGSQGVFSLRSAMW*SHFFMS
Trigger: AGACATGAAGAAGTGCGACCACCACATTGCCGACCT...GAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTCTGAAACAAACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp GGAAGAGCCTTGGGGCTTCCAGGGCACAAGCATGTGACAGTGACCCCTACAAAACGAAGGTCGGCAATGTaGTGGTCGCACTTCTTCATG +
Preference number: 4 (lower is better)
Translates to: GRALGLPGHKHVTVTPTKRRSAM*WSHFFM
Trigger: CATGAAGAAGTGCGACCACCACATTGCCGACCTTCG...TTTTGTAGGGGTCACTGTCACATGCTTGTGCCCTGGAAGCCCCAAGGCTCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp TCCAGAAATGTCTCTGGTTCGCATAGAGAGGTACCCAACTGGTCTCGGGACTCACGTCTCCAGCCTGTGTaGACTTTCTCCGCGCCTTCT +
Preference number: 4 (lower is better)
Translates to: SRNVSGSHREVPNWSRDSRLQPV*TFSAPS
Trigger: AGAAGGCGCGGAGAAAGTCCACACAGGCTGGAGACG...TGAGTCCCGAGACCAGTTGGGTACCTCTCTATGCGAACCAGAGACATTTCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp AATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAATCACCAGTCTCTTCAAACCATTTaGACTGGGCCTGGTTGTAGA +
Preference number: 4 (lower is better)
Translates to: NMGEPPARLSGSPFWNHQSLQTI*TGPGCR
Trigger: TCTACAACCAGGCCCAGTCCAAATGGTTTGAAGAGA...CTGGTGATTCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000579158.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp AATTCTGCCCTCACTGCAGATGTGCAGGTCAAACCCAAAGTGGTCAATGGGAAACGCAGCTGCGTGTACTaGCACAGGTGCTGCCGGATC +
Preference number: 4 (lower is better)
Translates to: NSALTADVQVKPKVVNGKRSCVY*HRCCRI
Trigger: GATCCGGCAGCACCTGTGCCAGTACACGCAGCTGCG...TTTCCCATTGACCACTTTGGGTTTGACCTGCACATCTGCAGTGAGGGCAGAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR CCA 90 bp AATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAATCACCAGGGCTCGACTGTGCTTTaGTTGAACATGTCTGTTTCA +
Preference number: 4 (lower is better)
Translates to: NMGEPPARLSGSPFWNHQGSTVL*LNMSVS
Trigger: TGAAACAGACATGTTCAACCAAAGCACAGTCGAGCC...CTGGTGATTCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000323816.8
ENST00000396115.6
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000579158.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp GCATGCCTGGCTTGTCTTGAGCATTCGCTGAATGAATGCAGATTAATCAGAACAGGCATCCACTCGGCATaGGCCCCATGGTGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: ACLACLEHSLNECRLIRTGIHSA*APWWEP
Trigger: GGGCTCCCACCATGGGGCCCATGCCGAGTGGATGCC...TGTTCTGATTAATCTGCATTCATTCAGCGAATGCTCAAGACAAGCCAGGCATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp GCCAAGGTCGCTGATGTCCTTCGAATGTTATGGCTTGTATTTCCAAAAGGGACTGCCCAGGAGAGAGGGTaGGGGGCATCCACTCGGCAT +
Preference number: 4 (lower is better)
Translates to: AKVADVLRMLWLVFPKGTAQERG*GASTRH
Trigger: ATGCCGAGTGGATGCCCCCCACCCTCTCTCCTGGGC...AGTCCCTTTTGGAAATACAAGCCATAACATTCGAAGGACATCAGCGACCTTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp CAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCTCCGGGTCACCCTTCTaGAATCACCAGCTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: QACDSDPYKTRQGPQSSSSGSPF*NHQLSP
Trigger: GGGAGAGAGCTGGTGATTCCAGAAGGGTGACCCGGA...GCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp ACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCATCTGTCTTCTGGGCCTaGGAATATGGGGGAGCCCCC +
Preference number: 4 (lower is better)
Translates to: TKLGKDHKVPASVCFRAASVFWA*EYGGAP
Trigger: GGGGGCTCCCCCATATTCCCAGGCCCAGAAGACAGA...TGCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp TACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCTCTGTCTTCTGGGCCTaGGAATATGGGGGAGCCCCC +
Preference number: 4 (lower is better)
Translates to: YKTRQGPQSSSLCLFQSGSVFWA*EYGGAP
Trigger: GGGGGCTCCCCCATATTCCCAGGCCCAGAAGACAGA...GCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp CACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCACAGGCATGGTGGGTCTaGGAAGACAGGAGCCAAGCC +
Preference number: 4 (lower is better)
Translates to: HKHVTVTPTKLGKDHKVPQAWWV*EDRSQA
Trigger: GGCTTGGCTCCTGTCTTCCCAGACCCACCATGCCTG...TGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp AAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAAGCACAGCATGGGAGTCAGGGTGGCGCCTGATCTCATaGGACACGATTCAGCGCTCA +
Preference number: 4 (lower is better)
Translates to: KVPASVCFRAASTAWESGWRLIS*DTIQRS
Trigger: TGAGCGCTGAATCGTGTCCCATGAGATCAGGCGCCA...CCCTGACTCCCATGCTGTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp TGTTTCAGAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGAGAAGGAGACTTTACAGATaGCGCCTGATCTCATGGGAC +
Preference number: 4 (lower is better)
Translates to: CFRAASTAWESGGLQPQRRRLYR*RLISWD
Trigger: GTCCCATGAGATCAGGCGCCATCTGTAAAGTCTCCT...TCTCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTCTGAAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp ATGGATTTCCAGGGCATGGGCTCCCGACTAGAATCTGCCCCTCGCTCATGCTTCAGGAGACTTTACAGATaGCGCCTGATCTCATGGGAC +
Preference number: 4 (lower is better)
Translates to: MDFQGMGSRLESAPRSCFRRLYR*RLISWD
Trigger: GTCCCATGAGATCAGGCGCCATCTGTAAAGTCTCCT...GAAGCATGAGCGAGGGGCAGATTCTAGTCGGGAGCCCATGCCCTGGAAATCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR CCA 90 bp AGTAAGGGTTTGGTGCAGGGCTCTGGAATGTCCAGAAGGAGCGGGAAGCAAAGGCAGCTGGGGGAAGGATaGATTGGCATTTCCAGAGGA +
Preference number: 4 (lower is better)
Translates to: SKGLVQGSGMSRRSGKQRQLGEG*IGISRG
Trigger: TCCTCTGGAAATGCCAATCCATCCTTCCCCCAGCTG...CCTTTGCTTCCCGCTCCTTCTGGACATTCCAGAGCCCTGCACCAAACCCTTACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp GGAAGAGCCTTGGGGCTTCCAGGGCACAAGCATGTGACAGTGACCCCTACAAAACAGCTGGGGGAAGGATaGATTGGCATTTCCAGAGGA +
Preference number: 4 (lower is better)
Translates to: GRALGLPGHKHVTVTPTKQLGEG*IGISRG
Trigger: TCCTCTGGAAATGCCAATCCATCCTTCCCCCAGCTG...TTTTGTAGGGGTCACTGTCACATGCTTGTGCCCTGGAAGCCCCAAGGCTCTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp GCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCGAGCCATCTGGGGGATaGCAAAGACTTGCCCTAACC +
Preference number: 4 (lower is better)
Translates to: ACDSDPYKTRQGPQSSSLEPSGG*QRLALT
Trigger: GGTTAGGGCAAGTCTTTGCCATCCCCCAGATGGCTC...GAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp CCGACTAGAATCTGCCCCTCGCTCATGCTTCTCCCGGCCCCTTTAGACTCTTTAGAAGACAGAGCCATCTaGGGGATGGCAAAGACTTGC +
Preference number: 4 (lower is better)
Translates to: PTRICPSLMLLPAPLDSLEDRAI*GMAKTC
Trigger: GCAAGTCTTTGCCATCCCCCAGATGGCTCTGTCTTC...TAAAGAGTCTAAAGGGGCCGGGAGAAGCATGAGCGAGGGGCAGATTCTAGTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR CCA 90 bp CAGAAACGGGCCCCTGTTCATACGGATAGGGGTTCTGGACTGTTGACTCTAGCCGGCGACAACCTAGTGTaGCCACAAGAGAGTCTGCTA +
Preference number: 4 (lower is better)
Translates to: QKRAPVHTDRGSGLLTLAGDNLV*PQESLL
Trigger: TAGCAGACTCTCTTGTGGCCACACTAGGTTGTCGCC...GGCTAGAGTCAACAGTCCAGAACCCCTATCCGTATGAACAGGGGCCCGTTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp CGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAAGCACAGCGGCGACAACCTAGTGTaGCCACAAGAGAGTCTGCTA +
Preference number: 4 (lower is better)
Translates to: RQGPQSSSLCLFQSGKHSGDNLV*PQESLL
Trigger: TAGCAGACTCTCTTGTGGCCACACTAGGTTGTCGCC...GCTGTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp GACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAAGCACAGCATGGGAGTTTGGTGCAGGGCTCTaGAATGTCCAGAAGGAGCGG +
Preference number: 4 (lower is better)
Translates to: DHKVPASVCFRAASTAWEFGAGL*NVQKER
Trigger: CCGCTCCTTCTGGACATTCCAGAGCCCTGCACCAAA...CTCCCATGCTGTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp CTGAGACGAGCTGGTTTGTTTCCATCCCTGAAGCCTTTGGACGAGCTGGATGAGTTTGGTGCAGGGCTCTaGAATGTCCAGAAGGAGCGG +
Preference number: 4 (lower is better)
Translates to: LRRAGLFPSLKPLDELDEFGAGL*NVQKER
Trigger: CCGCTCCTTCTGGACATTCCAGAGCCCTGCACCAAA...CTCATCCAGCTCGTCCAAAGGCTTCAGGGATGGAAACAAACCAGCTCGTCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp CATCTCACATGTAGGACTGACCCGGCCCCATTAAGAGCCTGTGGTGGGCGGCCCTTTAGACTGACATGGTaGAGAATGTGTTTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: HLTCRTDPAPLRACGGRPFRLTW*RMCLLW
Trigger: CCACAGCAAACACATTCTCCACCATGTCAGTCTAAA...GGGCCGCCCACCACAGGCTCTTAATGGGGCCGGGTCAGTCCTACATGTGAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR CCA 90 bp AAGGTGGCGGGACACTGCCTGAAAGGCGACAACCTAGTGTGGCCACAAGAGAGTCAGATCTGGACAGAGTaGTTCTCCATCCCATGGACA +
Preference number: 4 (lower is better)
Translates to: KVAGHCLKGDNLVWPQESQIWTE*FSIPWT
Trigger: TGTCCATGGGATGGAGAACCACTCTGTCCAGATCTG...ACTCTCTTGTGGCCACACTAGGTTGTCGCCTTTCAGGCAGTGTCCCGCCACCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR CCA 90 bp GACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAAGCACAGCATGGGAGCAACCTGAGCTACCCTaGAAGACGCAAGAGGGCTCA +
Preference number: 4 (lower is better)
Translates to: DHKVPASVCFRAASTAWEQPELP*KTQEGS
Trigger: TGAGCCCTCTTGCGTCTTCCAGGGTAGCTCAGGTTG...CTCCCATGCTGTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp AGTAAGGGTTTGGTGCAGGGCTCTGGAATGTCCAGAAGGAGCGGGAAGCAAAGGCCTCCAAAAATGGACTaGCCCAAACTGGGCCAACCT +
Preference number: 4 (lower is better)
Translates to: SKGLVQGSGMSRRSGKQRPPKMD*PKLGQP
Trigger: AGGTTGGCCCAGTTTGGGCCAGTCCATTTTTGGAGG...CCTTTGCTTCCCGCTCCTTCTGGACATTCCAGAGCCCTGCACCAAACCCTTACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp CGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAAGCACAGCGCTTCTCAGCATGCCTaGCTTGTCTTGAGCATTCGC +
Preference number: 4 (lower is better)
Translates to: RQGPQSSSLCLFQSGKHSASQHA*LVLSIR
Trigger: GCGAATGCTCAAGACAAGCCAGGCATGCTGAGAAGC...GCTGTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp GCACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCGCAGTGGCCCGATCTTaGTTCACTGCAATCTCCGCC +
Preference number: 4 (lower is better)
Translates to: AQACDSDPYKTRQGPQSSAVARS*FTAISA
Trigger: GGCGGAGATTGCAGTGAACCAAGATCGGGCCACTGC...GGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp TCCAGGGCACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAACAAGCTGGAGTGCAGTaGCCCGATCTTGGTTCACTG +
Preference number: 4 (lower is better)
Translates to: SRAQACDSDPYKTRQGPQQAGVQ*PDLGSL
Trigger: CAGTGAACCAAGATCGGGCCACTGCACTCCAGCTTG...TTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTGCCCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp GTGGGTCTGTCTTCTGGGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCCTGGTCTTAATTCACTaGCAATTTCATAGCCTCACT +
Preference number: 4 (lower is better)
Translates to: VGLSSGPGNMGEPPARLSLVLIH*QFHSLT
Trigger: AGTGAGGCTATGAAATTGCCAGTGAATTAAGACCAG...GGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCCCAGAAGACAGACCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp GAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGAGACAAGGGCTCACAGCAACCAACTTaGAACACCATTTGGCTTAAG +
Preference number: 4 (lower is better)
Translates to: ERQAQHGSQGVFSLRDKGSQQPT*NTIWLK
Trigger: CTTAAGCCAAATGGTGTTCCAAGTTGGTTGCTGTGA...GCCCTTGTCTCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp AATGTCCAGAAGGAGCGGGAAGCAAAGGTGGCGGGACACTGCCTGAAAGGCGACAAGGAAGCAGCAAGCTaGAAGTGGTCGTGCAAACAA +
Preference number: 4 (lower is better)
Translates to: NVQKEREAKVAGHCLKGDKEAAS*KWSCKQ
Trigger: TTGTTTGCACGACCACTTCCAGCTTGCTGCTTCCTT...GTCGCCTTTCAGGCAGTGTCCCGCCACCTTTGCTTCCCGCTCCTTCTGGACATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp ACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAGGCACAGCTGGCATTTaGAGGAGGAGCCTGGGGAAC +
Preference number: 4 (lower is better)
Translates to: TKLGKDHKVPASVCFRAAGTAGI*RRSLGN
Trigger: GTTCCCCAGGCTCCTCCTCCAAATGCCAGCTGTGCC...TGCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp GACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTCTTCACGCCTGTCCTaGCTCCTGGGGAGTAGACTC +
Preference number: 4 (lower is better)
Translates to: DSDPYKTRQGPQSSSLCLSSRLS*LLGSRL
Trigger: GAGTCTACTCCCCAGGAGCCAGGACAGGCGTGAAGA...CAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp AGGGCACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTGGCCTTAACTGGGTGTaGTCCTGTCCCTGCCACCAT +
Preference number: 4 (lower is better)
Translates to: RAQACDSDPYKTRQGPQSGLNWV*SCPCHH
Trigger: ATGGTGGCAGGGACAGGACCACACCCAGTTAAGGCC...ACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp GATCCTGACACCTGGCTTAGAGACAGAGCCCTCCCTACCCTGATCCTCCAAAGCGTCACTAAGGATGGCTaGCGTCCCTTTGAATGTCTG +
Preference number: 4 (lower is better)
Translates to: DPDTWLRDRALPTLILQSVTKDG*RPFECL
Trigger: CAGACATTCAAAGGGACGCCAGCCATCCTTAGTGAC...GCTTTGGAGGATCAGGGTAGGGAGGGCTCTGTCTCTAAGCCAGGTGTCAGGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp AAGGTGGCGGGACACTGCCTGAAAGGCGACAACCTAGTGTGGCCACAAGAGAGTGGTTACAGCCTCCACTaGGATCAGGGTTTCAACAGT +
Preference number: 4 (lower is better)
Translates to: KVAGHCLKGDNLVWPQESGYSLH*DQGFNS
Trigger: ACTGTTGAAACCCTGATCCCAGTGGAGGCTGTAACC...ACTCTCTTGTGGCCACACTAGGTTGTCGCCTTTCAGGCAGTGTCCCGCCACCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR CAA 72 bp AGGAAGCAGCAAGCTGGAAGTGGTCGTGCAAACAAGTaGAAGACCCTGGGCCAAGAACTTCCAGGGCGAAAG +
Preference number: 4 (lower is better)
Translates to: RKQQAGSGRANK*KTLGQELPGRK
Trigger: CTTTCGCCCTGGAAGTTCTTGGCCCAGGGTCTTCAACTTGTTTGCACGACCACTTCCAGCTTGCTGCTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp ACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCACATTGGTGGTCGTGTTaGCATAGTACCGCCGGCCCT +
Preference number: 4 (lower is better)
Translates to: TKLGKDHKVPASVCFRAAHWWSC*HSTAGP
Trigger: AGGGCCGGCGGTACTATGTCAACACGACCACCAATG...TGCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000585266.5
CDS-3UTR TCA 90 bp ACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGTGCGCTGGGGTCCCTaGTGCGTGGTATCCATTCAC +
Preference number: 4 (lower is better)
Translates to: TPTKLGKDHKVPASVCFRVRWGP*CVVSIH
Trigger: GTGAATGGATACCACGCATCAGGGACCCCAGCGCAC...TCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000585266.5
CDS-3UTR TCA 90 bp CAGATGGCGCCTGATCTCATGGGACACGATTCAGCGCTCAATTTGGGGCTAATTGGCATCGTGTCTGGGTaGGGGAACGTCACACAGTTT +
Preference number: 4 (lower is better)
Translates to: QMAPDLMGHDSALNLGLIGIVSG*GNVTQF
Trigger: AAACTGTGTGACGTTCCCTCACCCAGACACGATGCC...AATTAGCCCCAAATTGAGCGCTGAATCGTGTCCCATGAGATCAGGCGCCATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR TCA 90 bp CAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCGGCATCGTGTCTGGGTaGGGGAACGTCACACAGTTT +
Preference number: 4 (lower is better)
Translates to: QACDSDPYKTRQGPQSSSGIVSG*GNVTQF
Trigger: AAACTGTGTGACGTTCCCTCACCCAGACACGATGCC...GCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000583882.5
ENST00000585266.5
CDS-3UTR TCA 90 bp GTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTGGCATCGTGTCTGGGTaGGGGAACGTCACACAGTTT +
Preference number: 4 (lower is better)
Translates to: VTVTPTKLGKDHKVPASVGIVSG*GNVTQF
Trigger: AAACTGTGTGACGTTCCCTCACCCAGACACGATGCC...AACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000583882.5
ENST00000585266.5
CDS-3UTR TCA 90 bp GCACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCGGAGCCTTCCTCCTGTaGAGCCAAGGAGTTCTGAGA +
Preference number: 4 (lower is better)
Translates to: AQACDSDPYKTRQGPQSSGAFLL*SQGVLR
Trigger: TCTCAGAACTCCTTGGCTTCACAGGAGGAAGGCTCC...GGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR TCA 90 bp CAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCGGAGCCTTCCTCCTGTaGAGCCAAGGAGTTCTGAGA +
Preference number: 4 (lower is better)
Translates to: QACDSDPYKTRQGPQSSSGAFLL*SQGVLR
Trigger: TCTCAGAACTCCTTGGCTTCACAGGAGGAAGGCTCC...GCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR TCA 90 bp CATCTCACATGTAGGACTGACCCGGCCCCATTAAGAGCCTGTGGTGGGCGGCCCTCTTCATGTCTTTCTTaGAGTTCTCACGGAAGTTCA +
Preference number: 4 (lower is better)
Translates to: HLTCRTDPAPLRACGGRPSSCLS*SSHGSS
Trigger: TGAACTTCCGTGAGAACTTCAAGAAAGACATGAAGA...GGGCCGCCCACCACAGGCTCTTAATGGGGCCGGGTCAGTCCTACATGTGAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR TCA 90 bp TCCAGGGCACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAATCTTGTTGCTCAGCTTaGTCTCCAGCTGCTGGGTCT +
Preference number: 4 (lower is better)
Translates to: SRAQACDSDPYKTRQGPQSCCSA*SPAAGS
Trigger: AGACCCAGCAGCTGGAGATCAAGCTGAGCAACAAGA...TTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTGCCCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR TCA 90 bp GACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAAGCACAGCATGGGAGTTCTCCGCGCCTTCTTaGTGTCCTCCTCTGTCTTGT +
Preference number: 4 (lower is better)
Translates to: DHKVPASVCFRAASTAWEFSAPS*CPPLSC
Trigger: ACAAGACAGAGGAGGACATCAAGAAGGCGCGGAGAA...CTCCCATGCTGTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR TCA 90 bp GTTGAATTCTGCCCTCACTGCAGATGTGCAGGTCAAACCCAAAGTGGTCAATGGGGTGCGGCTGTGAGCTaGATGGCACCTTCTACCCAT +
Preference number: 4 (lower is better)
Translates to: VEFCPHCRCAGQTQSGQWGAAVS*MAPSTH
Trigger: ATGGGTAGAAGGTGCCATTCAGCTCACAGCCGCACC...CCATTGACCACTTTGGGTTTGACCTGCACATCTGCAGTGAGGGCAGAATTCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR TCA 90 bp CATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTTTCTGGGTGCGGCTGTaGGCTGAATGGCACCTTCTA +
Preference number: 4 (lower is better)
Translates to: HVTVTPTKLGKDHKVPASFWVRL*AEWHLL
Trigger: TAGAAGGTGCCATTCAGCTCACAGCCGCACCCAGAA...AGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR TCA 90 bp AGTAAGGGTTTGGTGCAGGGCTCTGGAATGTCCAGAAGGAGCGGGAAGCAAAGGTTTACAGATGGCGCCTaGTCTCATGGGACACGATTC +
Preference number: 4 (lower is better)
Translates to: SKGLVQGSGMSRRSGKQRFTDGA*SHGTRF
Trigger: GAATCGTGTCCCATGAGATCAGGCGCCATCTGTAAA...CCTTTGCTTCCCGCTCCTTCTGGACATTCCAGAGCCCTGCACCAAACCCTTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR TCA 90 bp AGTAAGGGTTTGGTGCAGGGCTCTGGAATGTCCAGAAGGAGCGGGAAGCAAAGGACTCTATCCCAGGGATaGACAGAGGACTCTGGAATC +
Preference number: 4 (lower is better)
Translates to: SKGLVQGSGMSRRSGKQRTLSQG*TEDSGI
Trigger: GATTCCAGAGTCCTCTGTTCATCCCTGGGATAGAGT...CCTTTGCTTCCCGCTCCTTCTGGACATTCCAGAGCCCTGCACCAAACCCTTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp CAGAAACGGGCCCCTGTTCATACGGATAGGGGTTCTGGACTGTTGACTCTAGCCACTCTATCCCAGGGATaGACAGAGGACTCTGGAATC +
Preference number: 4 (lower is better)
Translates to: QKRAPVHTDRGSGLLTLATLSQG*TEDSGI
Trigger: GATTCCAGAGTCCTCTGTTCATCCCTGGGATAGAGT...GGCTAGAGTCAACAGTCCAGAACCCCTATCCGTATGAACAGGGGCCCGTTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp CCAAACAGCAGCACTGAAAGCTTCCCAAGTCACACTCAGACCAGACTTTTCCAGCAAACTGGGCCAACCTaGGCTACCCTGGAAGACGCA +
Preference number: 4 (lower is better)
Translates to: PNSSTESFPSHTQTRLFQQTGPT*ATLEDA
Trigger: TGCGTCTTCCAGGGTAGCTCAGGTTGGCCCAGTTTG...CTGGAAAAGTCTGGTCTGAGTGTGACTTGGGAAGCTTTCAGTGCTGCTGTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp AGGGCACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTGATCACGGGCTTCCCTaGCGACAGGGCCATTATAGT +
Preference number: 4 (lower is better)
Translates to: RAQACDSDPYKTRQGPQSDHGLP*RQGHYS
Trigger: ACTATAATGGCCCTGTCGTCAGGGAAGCCCGTGATC...ACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp CATGATTCTGATCCTGACACCTGGCTTAGAGACAGAGCCCTCCCTACCCTGATCCAATGCCAAGGTTGCTaGCCGGTAAGACCCCTGAAA +
Preference number: 4 (lower is better)
Translates to: HDSDPDTWLRDRALPTLIQCQGC*PVRPLK
Trigger: TTTCAGGGGTCTTACCGGTCAGCAACCTTGGCATTG...GATCAGGGTAGGGAGGGCTCTGTCTCTAAGCCAGGTGTCAGGATCAGAATCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp TGCTGGCCTCTGAGACGAGCTGGTTTGTTTCCATCCCTGAAGCCTTTGGACGAGGCAGGTAGAAGGGGCTaGCTTGTTCTCAGAAATGGA +
Preference number: 4 (lower is better)
Translates to: CWPLRRAGLFPSLKPLDEAGRRG*LVLRNG
Trigger: TCCATTTCTGAGAACAAGTCAGCCCCTTCTACCTGC...CTCGTCCAAAGGCTTCAGGGATGGAAACAAACCAGCTCGTCTCAGAGGCCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp ACAGTCCTGAACACCACACGCAATCTCCAAAGGCCATCGCCCCAACCTCACCCCCCTATGTGTTGCCACTaGCTGAAAGCACTAGAAAGA +
Preference number: 4 (lower is better)
Translates to: TVLNTTRNLQRPSPQPHPPMCCH*LKALER
Trigger: TCTTTCTAGTGCTTTCAGTCAGTGGCAACACATAGG...GGGGTGAGGTTGGGGCGATGGCCTTTGGAGATTGCGTGTGGTGTTCAGGACTGT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp AGTAAGGGTTTGGTGCAGGGCTCTGGAATGTCCAGAAGGAGCGGGAAGCAAAGGGCTGTTTATCAATCCTaGCTAGCAGAGCACTGCCTC +
Preference number: 4 (lower is better)
Translates to: SKGLVQGSGMSRRSGKQRAVYQS*LAEHCL
Trigger: GAGGCAGTGCTCTGCTAGTCAGGATTGATAAACAGC...CCTTTGCTTCCCGCTCCTTCTGGACATTCCAGAGCCCTGCACCAAACCCTTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp CTGTTTGTTTCAGAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCGAAACCCCTGGTTGGTaGATTCGTTGGTACACTGTT +
Preference number: 4 (lower is better)
Translates to: LFVSERQAQHGSQGVFSLETPGW*IRWYTV
Trigger: AACAGTGTACCAACGAATTCACCAACCAGGGGTTTC...GAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTCTGAAACAAACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp GGGGTGGTGCGGGGGCAGGTGGGTTACAGCCTCCACTGGGATCAGGGTTTCAACCACTCATCTAGTAATTaGTTGGTTTTCACAAAGGGT +
Preference number: 4 (lower is better)
Translates to: GVVRGQVGYSLHWDQGFNHSSSN*LVFTKG
Trigger: ACCCTTTGTGAAAACCAATCAATTACTAGATGAGTG...GTTGAAACCCTGATCCCAGTGGAGGCTGTAACCCACCTGCCCCCGCACCACCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp GATCCTGACACCTGGCTTAGAGACAGAGCCCTCCCTACCCTGATCCTCCAAAGCACAAGCCAAGGTCGCTaGTGTCCTTCGAATGTTATG +
Preference number: 4 (lower is better)
Translates to: DPDTWLRDRALPTLILQSTSQGR*CPSNVM
Trigger: CATAACATTCGAAGGACATCAGCGACCTTGGCTTGT...GCTTTGGAGGATCAGGGTAGGGAGGGCTCTGTCTCTAAGCCAGGTGTCAGGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp GGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGAGACAAGGGCAGGGACAAGGAATGCATCTTaGGCCTTCTGTTTAAACACT +
Preference number: 4 (lower is better)
Translates to: GKHSMGVRGSSASETRAGTRNAS*AFCLNT
Trigger: AGTGTTTAAACAGAAGGCTCAAGATGCATTCCTTGT...CCCTGCCCTTGTCTCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp CATCTCACATGTAGGACTGACCCGGCCCCATTAAGAGCCTGTGGTGGGCGGCCCAAGGCGACATCAGTGTaGCTCCATTTATATGACATT +
Preference number: 4 (lower is better)
Translates to: HLTCRTDPAPLRACGGRPKATSV*LHLYDI
Trigger: AATGTCATATAAATGGAGTCACACTGATGTCGCCTT...GGGCCGCCCACCACAGGCTCTTAATGGGGCCGGGTCAGTCCTACATGTGAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp AATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAATCACCAGCGCACACATCATGAATaGCTCAAAAGCATTAAGCTG +
Preference number: 4 (lower is better)
Translates to: NMGEPPARLSGSPFWNHQRTHHE*LKSIKL
Trigger: CAGCTTAATGCTTTTGAGTCATTCATGATGTGTGCG...CTGGTGATTCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp GGATCCAGAAATGTCTCTGGTTCGCATAGAGAGGTACCCAACTGGTCTCGGGACGCCAAAAGGCGAGTGTaGGCCCTAAGAACAGCTTGT +
Preference number: 4 (lower is better)
Translates to: GSRNVSGSHREVPNWSRDAKRRV*ALRTAC
Trigger: ACAAGCTGTTCTTAGGGCTCACACTCGCCTTTTGGC...GTCCCGAGACCAGTTGGGTACCTCTCTATGCGAACCAGAGACATTTCTGGATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp GCACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGGTTGCAGCAGACGTaGGCAGCAATTGAGCACCCA +
Preference number: 4 (lower is better)
Translates to: AQACDSDPYKTRQGPQSSRLQQT*AAIEHP
Trigger: TGGGTGCTCAATTGCTGCTCACGTCTGCTGCAACCT...GGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp GGATCCAGAAATGTCTCTGGTTCGCATAGAGAGGTACCCAACTGGTCTCGGGACAGCAGATCTGCTGGCTaGGATGCAAGCTTCAGGTTG +
Preference number: 4 (lower is better)
Translates to: GSRNVSGSHREVPNWSRDSRSAG*DASFRL
Trigger: CAACCTGAAGCTTGCATCTCAGCCAGCAGATCTGCT...GTCCCGAGACCAGTTGGGTACCTCTCTATGCGAACCAGAGACATTTCTGGATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp GTGGAGGAAACACATTCATACCGGGGTGAGGAGTGCTGGCGGGAGACACGGCTCGTACATCATTGGAAATaGGAAAGGGAGGAGGTACAT +
Preference number: 4 (lower is better)
Translates to: VEETHSYRGEECWRETRLVHHWK*EREEVH
Trigger: ATGTACCTCCTCCCTTTCTCATTTCCAATGATGTAC...GAGCCGTGTCTCCCGCCAGCACTCCTCACCCCGGTATGAATGTGTTTCCTCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp AAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAAGCACAGCATGGGAGTCAGGGGAGCCAGACACAGCATaGACACGTGTACAGGGTACA +
Preference number: 4 (lower is better)
Translates to: KVPASVCFRAASTAWESGEPDTA*TRVQGT
Trigger: TGTACCCTGTACACGTGTTCATGCTGTGTCTGGCTC...CCCTGACTCCCATGCTGTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp GGATCCAGAAATGTCTCTGGTTCGCATAGAGAGGTACCCAACTGGTCTCGGGACGAGCCAGACACAGCATaGACACGTGTACAGGGTACA +
Preference number: 4 (lower is better)
Translates to: GSRNVSGSHREVPNWSRDEPDTA*TRVQGT
Trigger: TGTACCCTGTACACGTGTTCATGCTGTGTCTGGCTC...GTCCCGAGACCAGTTGGGTACCTCTCTATGCGAACCAGAGACATTTCTGGATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp CTGAGACGAGCTGGTTTGTTTCCATCCCTGAAGCCTTTGGACGAGCTGGATGAGACTGAGCAGGGGGCATaGACAAGACACAGCTTAGTG +
Preference number: 4 (lower is better)
Translates to: LRRAGLFPSLKPLDELDETEQGA*TRHSLV
Trigger: CACTAAGCTGTGTCTTGTTCATGCCCCCTGCTCAGT...CTCATCCAGCTCGTCCAAAGGCTTCAGGGATGGAAACAAACCAGCTCGTCTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp CAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCGGACTCACCTTTCACTaGGCAGGGGGCATGAACAAG +
Preference number: 4 (lower is better)
Translates to: QACDSDPYKTRQGPQSSSGLTFH*AGGMNK
Trigger: CTTGTTCATGCCCCCTGCTCAGTGAAAGGTGAGTCC...GCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp GAAAACTGTACAAGGGACAGCAGTCCCAGCCCTGCCATACACAAGAAGACAGAGAGCACCCACGTGCCCTaGCCTTACATTCCACTGCAA +
Preference number: 4 (lower is better)
Translates to: ENCTRDSSPSPAIHKKTESTHVP*PYIPLQ
Trigger: TTGCAGTGGAATGTAAGGTCAGGGCACGTGGGTGCT...CTCTGTCTTCTTGTGTATGGCAGGGCTGGGACTGCTGTCCCTTGTACAGTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp GCACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCACCCACGTGCCCTaGCCTTACATTCCACTGCAA +
Preference number: 4 (lower is better)
Translates to: AQACDSDPYKTRQGPQSSSTHVP*PYIPLQ
Trigger: TTGCAGTGGAATGTAAGGTCAGGGCACGTGGGTGCT...GGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp ACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAAGCACAGCATGGGAGTCTTTTTGCTTGGCGATaGGGATCCCAGGTTCTGGGG +
Preference number: 4 (lower is better)
Translates to: TTKFQPLFVSERQAQHGSLFAWR*GSQVLG
Trigger: CCCCAGAACCTGGGATCCTCATCGCCAAGCAAAAAG...ACTCCCATGCTGTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580865.5
CDS-3UTR GCA 90 bp ACAGTCCTGAACACCACACGCAATCTCCAAAGGCCATCGCCCCAACCTCACCCCGTGTTTTCCTTGCTCTaGTTTTTGCTTGGCGATGAG +
Preference number: 4 (lower is better)
Translates to: TVLNTTRNLQRPSPQPHPVFSLL*FLLGDE
Trigger: CTCATCGCCAAGCAAAAAGCAGAGCAAGGAAAACAC...GGGGTGAGGTTGGGGCGATGGCCTTTGGAGATTGCGTGTGGTGTTCAGGACTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp CTGAGACGAGCTGGTTTGTTTCCATCCCTGAAGCCTTTGGACGAGCTGGATGAGGTTGGTTTCAGCAGCTaGTGTTCCGGCATCGTGTCT +
Preference number: 4 (lower is better)
Translates to: LRRAGLFPSLKPLDELDEVGFSS*CSGIVS
Trigger: AGACACGATGCCGGAACAGCAGCTGCTGAAACCAAC...CTCATCCAGCTCGTCCAAAGGCTTCAGGGATGGAAACAAACCAGCTCGTCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp CTGAGACGAGCTGGTTTGTTTCCATCCCTGAAGCCTTTGGACGAGCTGGATGAGCTTGAGGTGAACTTCTaGTTCGTCCGCCAGGCTCTT +
Preference number: 4 (lower is better)
Translates to: LRRAGLFPSLKPLDELDELEVNF*FVRQAL
Trigger: AAGAGCCTGGCGGACGAAGCAGAAGTTCACCTCAAG...CTCATCCAGCTCGTCCAAAGGCTTCAGGGATGGAAACAAACCAGCTCGTCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp CAAAGACTTGCCCTAACCCATCTCACATGTAGGACTGACCCGGCCCCATTAAGAATCTCCAGGTCTCTCTaGCGCTCTGTGAGGGCTTTC +
Preference number: 4 (lower is better)
Translates to: QRLALTHLTCRTDPAPLRISRSL*RSVRAF
Trigger: GAAAGCCCTCACAGAGCGGCAGAGAGACCTGGAGAT...TCTTAATGGGGCCGGGTCAGTCCTACATGTGAGATGGGTTAGGGCAAGTCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp AGGGCACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTATCTCCAGGTCTCTCTaGCGCTCTGTGAGGGCTTTC +
Preference number: 4 (lower is better)
Translates to: RAQACDSDPYKTRQGPQSISRSL*RSVRAF
Trigger: GAAAGCCCTCACAGAGCGGCAGAGAGACCTGGAGAT...ACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp AAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAAGCACAGCATGGGAGTCAGGGAGCTTGATCTCCAGCTaGTGGGTCTTCATCTCCAGG +
Preference number: 4 (lower is better)
Translates to: KVPASVCFRAASTAWESGSLISS*WVFISR
Trigger: CCTGGAGATGAAGACCCAGCAGCTGGAGATCAAGCT...CCCTGACTCCCATGCTGTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp CATGATTCTGATCCTGACACCTGGCTTAGAGACAGAGCCCTCCCTACCCTGATCAGCTTGATCTCCAGCTaGTGGGTCTTCATCTCCAGG +
Preference number: 4 (lower is better)
Translates to: HDSDPDTWLRDRALPTLISLISS*WVFISR
Trigger: CCTGGAGATGAAGACCCAGCAGCTGGAGATCAAGCT...GATCAGGGTAGGGAGGGCTCTGTCTCTAAGCCAGGTGTCAGGATCAGAATCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp ACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAAGCACAGCATGGGAGTTACTGGCACAGGTGCTaGCGGATCATCTCTACCCTC +
Preference number: 4 (lower is better)
Translates to: TTKFQPLFVSERQAQHGSYWHRC*RIISTL
Trigger: GAGGGTAGAGATGATCCGGCAGCACCTGTGCCAGTA...ACTCCCATGCTGTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp CATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTTACTGGCACAGGTGCTaGCGGATCATCTCTACCCTC +
Preference number: 4 (lower is better)
Translates to: HVTVTPTKLGKDHKVPASYWHRC*RIISTL
Trigger: GAGGGTAGAGATGATCCGGCAGCACCTGTGCCAGTA...AGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp GCACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCTACTGGCACAGGTGCTaGCGGATCATCTCTACCCTC +
Preference number: 4 (lower is better)
Translates to: AQACDSDPYKTRQGPQSSYWHRC*RIISTL
Trigger: GAGGGTAGAGATGATCCGGCAGCACCTGTGCCAGTA...GGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp AGGGTTTGCCGATGTGCTCGTGTCTGTGAAGGGGTTGCTTCCGGTCATCTCCTTAACATGTCTGTTTCATaGCGCAGCTGCGTGTACTGG +
Preference number: 4 (lower is better)
Translates to: RVCRCARVCEGVASGHLLNMSVS*RSCVYW
Trigger: CCAGTACACGCAGCTGCGGCATGAAACAGACATGTT...AAGGAGATGACCGGAAGCAACCCCTTCACAGACACGAGCACATCGGCAAACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp CAAAGACTTGCCCTAACCCATCTCACATGTAGGACTGACCCGGCCCCATTAAGAATGTTGCCCGTCTTGTaGTCTCTGACCCACAGCTCC +
Preference number: 4 (lower is better)
Translates to: QRLALTHLTCRTDPAPLRMLPVL*SLTHSS
Trigger: GGAGCTGTGGGTCAGAGAGCACAAGACGGGCAACAT...TCTTAATGGGGCCGGGTCAGTCCTACATGTGAGATGGGTTAGGGCAAGTCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp ACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAAGCACAGCATGGGAGTATGTTGCCCGTCTTGTaGTCTCTGACCCACAGCTCC +
Preference number: 4 (lower is better)
Translates to: TTKFQPLFVSERQAQHGSMLPVL*SLTHSS
Trigger: GGAGCTGTGGGTCAGAGAGCACAAGACGGGCAACAT...ACTCCCATGCTGTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp TGCTGGCCTCTGAGACGAGCTGGTTTGTTTCCATCCCTGAAGCCTTTGGACGAGGGGATGGCAAAGACTTaGCCTAACCCATCTCACATG +
Preference number: 4 (lower is better)
Translates to: CWPLRRAGLFPSLKPLDEGMAKT*PNPSHM
Trigger: CATGTGAGATGGGTTAGGGCAAGTCTTTGCCATCCC...CTCGTCCAAAGGCTTCAGGGATGGAAACAAACCAGCTCGTCTCAGAGGCCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp GCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCCAGCAGTCCCAGCCCTaGCATACACAAGAAGACAGA +
Preference number: 4 (lower is better)
Translates to: ACDSDPYKTRQGPQSSSLQQSQP*HTQEDR
Trigger: TCTGTCTTCTTGTGTATGGCAGGGCTGGGACTGCTG...GAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp CATGATTCTGATCCTGACACCTGGCTTAGAGACAGAGCCCTCCCTACCCTGATCGCTATGCCTGTCCAGTaGCCACCAGTGACAGAAAAC +
Preference number: 4 (lower is better)
Translates to: HDSDPDTWLRDRALPTLIAMPVQ*PPVTEN
Trigger: GTTTTCTGTCACTGGTGGGCACTGGACAGGCATAGC...GATCAGGGTAGGGAGGGCTCTGTCTCTAAGCCAGGTGTCAGGATCAGAATCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp GACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGCAAGAGAGTCTGCTATaGCTGTCCAGTGCCCACCAG +
Preference number: 4 (lower is better)
Translates to: DSDPYKTRQGPQSSSLCLQESLL*LSSAHQ
Trigger: CTGGTGGGCACTGGACAGGCATAGCAGACTCTCTTG...CAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp CAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCAAGAGAGTCTGCTATaGCTGTCCAGTGCCCACCAG +
Preference number: 4 (lower is better)
Translates to: QACDSDPYKTRQGPQSSSQESLL*LSSAHQ
Trigger: CTGGTGGGCACTGGACAGGCATAGCAGACTCTCTTG...GCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp GGAAGAGCCTTGGGGCTTCCAGGGCACAAGCATGTGACAGTGACCCCTACAAAACAAGTAAGGGTTTGGTaGAGGGCTCTGGAATGTCCA +
Preference number: 4 (lower is better)
Translates to: GRALGLPGHKHVTVTPTKQVRVW*RALECP
Trigger: TGGACATTCCAGAGCCCTGCACCAAACCCTTACTTG...TTTTGTAGGGGTCACTGTCACATGCTTGTGCCCTGGAAGCCCCAAGGCTCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp CGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAAGCACAGCCAAGTAAGGGTTTGGTaGAGGGCTCTGGAATGTCCA +
Preference number: 4 (lower is better)
Translates to: RQGPQSSSLCLFQSGKHSQVRVW*RALECP
Trigger: TGGACATTCCAGAGCCCTGCACCAAACCCTTACTTG...GCTGTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp GTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTCTCCCGACTAGAATCTaGCCCTCGCTCATGCTTCTC +
Preference number: 4 (lower is better)
Translates to: VTVTPTKLGKDHKVPASVLPTRI*PSLMLL
Trigger: GAGAAGCATGAGCGAGGGGCAGATTCTAGTCGGGAG...AACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR GCA 90 bp AAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAAGCACAGCATGGGAGTCAGGGCCCTCACTGCAGATGTaGAGGTCAAACCCAAAGTGG +
Preference number: 4 (lower is better)
Translates to: KVPASVCFRAASTAWESGPSLQM*RSNPKW
Trigger: CCACTTTGGGTTTGACCTGCACATCTGCAGTGAGGG...CCCTGACTCCCATGCTGTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR GCA 90 bp TGTTTCAGAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGAGAGTGCTTGTTGAATTCTaGCCTCACTGCAGATGTGCA +
Preference number: 4 (lower is better)
Translates to: CFRAASTAWESGGLQPQRVLVEF*PHCRCA
Trigger: TGCACATCTGCAGTGAGGGCAGAATTCAACAAGCAC...TCTCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTCTGAAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR GCA 90 bp TGTCCAGAAGGAGCGGGAAGCAAAGGTGGCGGGACACTGCCTGAAAGGCGACAAAAGACCAGTGAGTTGTaGTTGTTGAATTCTGCCCTC +
Preference number: 4 (lower is better)
Translates to: CPEGAGSKGGGTLPERRQKTSEL*LLNSAL
Trigger: GAGGGCAGAATTCAACAAGCACAACTCACTGGTCTT...TTGTCGCCTTTCAGGCAGTGTCCCGCCACCTTTGCTTCCCGCTCCTTCTGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR GCA 90 bp GAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGAGACAAGGGCCTTGCCTCTCCAAAGTaGAGTCTTTTATTTTCTCAG +
Preference number: 4 (lower is better)
Translates to: ERQAQHGSQGVFSLRDKGLASPK*SLLFSQ
Trigger: CTGAGAAAATAAAAGACTGCACTTTGGAGAGGCAAG...GCCCTTGTCTCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp TCCAGGGCACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAACAACCCGGATAGCGTaGTTGCCTCTCCAAAGTGCA +
Preference number: 4 (lower is better)
Translates to: SRAQACDSDPYKTRQGPQTTRIA*LPLQSA
Trigger: TGCACTTTGGAGAGGCAAGCACGCTATCCGGGTTGT...TTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTGCCCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp GATCCTGACACCTGGCTTAGAGACAGAGCCCTCCCTACCCTGATCCTCCAAAGCCACAAACAGATCTTGTaGATCAGTCTCCTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: DPDTWLRDRALPTLILQSHKQIL*ISLLGG
Trigger: TCCACCCAGGAGACTGATGCACAAGATCTGTTTGTG...GCTTTGGAGGATCAGGGTAGGGAGGGCTCTGTCTCTAAGCCAGGTGTCAGGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp GGATTTCCAGGGCATGGGCTCCCGACTAGAATCTGCCCCTCGCTCATGCTTCTCTACACTGTTTCGGTGTaGCCAGCTGTTTATCAATCC +
Preference number: 4 (lower is better)
Translates to: GFPGHGLPTRICPSLMLLYTVSV*PAVYQS
Trigger: GGATTGATAAACAGCTGGGCACACCGAAACAGTGTA...GAGAAGCATGAGCGAGGGGCAGATTCTAGTCGGGAGCCCATGCCCTGGAAATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp AGTAAGGGTTTGGTGCAGGGCTCTGGAATGTCCAGAAGGAGCGGGAAGCAAAGGATGCAAGCTTCAGGTTaGAGCAGACGTGAGCAGCAA +
Preference number: 4 (lower is better)
Translates to: SKGLVQGSGMSRRSGKQRMQASG*SRREQQ
Trigger: TTGCTGCTCACGTCTGCTGCAACCTGAAGCTTGCAT...CCTTTGCTTCCCGCTCCTTCTGGACATTCCAGAGCCCTGCACCAAACCCTTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp GCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTCCATGCTGCTTCTaGTCGCCTTTCAAAGCCTCC +
Preference number: 4 (lower is better)
Translates to: ACDSDPYKTRQGPQSSSLCPCCF*SPFKAS
Trigger: GGAGGCTTTGAAAGGCGAGCAGAAGCAGCATGGACA...GAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp CTGTTTGTTTCAGAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCCCTTCTTGTCCATGCTaGTTCTGCTCGCCTTTCAAA +
Preference number: 4 (lower is better)
Translates to: LFVSERQAQHGSQGVFSLPSCPC*FCSPFK
Trigger: TTTGAAAGGCGAGCAGAAGCAGCATGGACAAGAAGG...GAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTCTGAAACAAACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp GCACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCGAGAGTCTTGGGTCCTaGCTGAAGCCCTCAGACTCA +
Preference number: 4 (lower is better)
Translates to: AQACDSDPYKTRQGPQSSESLGS*LKPSDS
Trigger: TGAGTCTGAGGGCTTCAGGCAGGACCCAAGACTCTC...GGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585266.5
CDS-3UTR GCA 90 bp CATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTACCTTCTCTGGGGGCTaGTACCTCAGAGGAGAGTCT +
Preference number: 4 (lower is better)
Translates to: HVTVTPTKLGKDHKVPASTFSGG*YLRGES
Trigger: AGACTCTCCTCTGAGGTAGCAGCCCCCAGAGAAGGT...AGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000585266.5
CDS-3UTR CCA 90 bp CATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTTGGGACGTTCCCAGGTaGTCTCATTGGTGGTCGTGT +
Preference number: 4 (lower is better)
Translates to: HVTVTPTKLGKDHKVPASWDVPR*SHWWSC
Trigger: ACACGACCACCAATGAGACCACCTGGGAACGTCCCA...AGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000585266.5
CDS-3UTR CCA 90 bp CAGATGGCGCCTGATCTCATGGGACACGATTCAGCGCTCAATTTGGGGCTAATTTGGGACGTTCCCAGGTaGTCTCATTGGTGGTCGTGT +
Preference number: 4 (lower is better)
Translates to: QMAPDLMGHDSALNLGLIWDVPR*SHWWSC
Trigger: ACACGACCACCAATGAGACCACCTGGGAACGTCCCA...AATTAGCCCCAAATTGAGCGCTGAATCGTGTCCCATGAGATCAGGCGCCATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR CCA 90 bp TACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCTCCCAGGAGAACTGCTaGGACGTTCCCAGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: YKTRQGPQSSSLCLFQSGSQENC*DVPRWS
Trigger: AGACCACCTGGGAACGTCCCAGCAGTTCTCCTGGGA...GCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000585266.5
CDS-3UTR CCA 90 bp CACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAAGAGCCAGGGCTGGCTaGAATCCCAGGAGAACTGCT +
Preference number: 4 (lower is better)
Translates to: HKHVTVTPTKLGKDHKVPRARAG*NPRRTA
Trigger: AGCAGTTCTCCTGGGATTCCAGCCAGCCCTGGCTCT...TGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000585266.5
CDS-3UTR CCA 90 bp GCTTCCAGGGCACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCAGTATCCATTCACTGTTaGAGGCAGAGAGCTCCTGTG +
Preference number: 4 (lower is better)
Translates to: ASRAQACDSDPYKTRQGPVSIHC*RQRAPV
Trigger: CACAGGAGCTCTCTGCCTCCAACAGTGAATGGATAC...TGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTGCCCTGGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000585266.5
CDS-3UTR CCA 90 bp CATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTTTCCGGCATCGTGTCTaGGTGAGGGAACGTCACACA +
Preference number: 4 (lower is better)
Translates to: HVTVTPTKLGKDHKVPASFRHRV*VRERHT
Trigger: TGTGTGACGTTCCCTCACCCAGACACGATGCCGGAA...AGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000583882.5
ENST00000585266.5
CDS-3UTR CCA 90 bp GCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCGTAGCTCCACTCGGTTaGTTTCAGCAGCTGCTGTTC +
Preference number: 4 (lower is better)
Translates to: ACDSDPYKTRQGPQSSSLVAPLG*FQQLLF
Trigger: GAACAGCAGCTGCTGAAACCAACCGAGTGGAGCTAC...GAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000583882.5
ENST00000585266.5
CDS-3UTR CCA 90 bp ACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAACGGTGCCGTTGCCTTaGGGGTCCTTCTTATCAGCC +
Preference number: 4 (lower is better)
Translates to: TKLGKDHKVPASVCFRAATVPLP*GSFLSA
Trigger: GGCTGATAAGAAGGACCCCCAAGGCAACGGCACCGT...TGCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp TGCTGGCCTCTGAGACGAGCTGGTTTGTTTCCATCCCTGAAGCCTTTGGACGAGAGGTCGGCAATGTGGTaGTCGCACTTCTTCATGTCT +
Preference number: 4 (lower is better)
Translates to: CWPLRRAGLFPSLKPLDERSAMW*SHFFMS
Trigger: AGACATGAAGAAGTGCGACCACCACATTGCCGACCT...CTCGTCCAAAGGCTTCAGGGATGGAAACAAACCAGCTCGTCTCAGAGGCCAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp CACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCACGTCTCCAGCCTGTGTaGACTTTCTCCGCGCCTTCT +
Preference number: 4 (lower is better)
Translates to: HKHVTVTPTKLGKDHKVPRLQPV*TFSAPS
Trigger: AGAAGGCGCGGAGAAAGTCCACACAGGCTGGAGACG...TGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp ACAGTCCTGAACACCACACGCAATCTCCAAAGGCCATCGCCCCAACCTCACCCCGGCTCGACTGTGCTTTaGTTGAACATGTCTGTTTCA +
Preference number: 4 (lower is better)
Translates to: TVLNTTRNLQRPSPQPHPGSTVL*LNMSVS
Trigger: TGAAACAGACATGTTCAACCAAAGCACAGTCGAGCC...GGGGTGAGGTTGGGGCGATGGCCTTTGGAGATTGCGTGTGGTGTTCAGGACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp CATGATTCTGATCCTGACACCTGGCTTAGAGACAGAGCCCTCCCTACCCTGATCACAGCTCCCTGTCTTTaGCCGGGTCCACTTTTCGAA +
Preference number: 4 (lower is better)
Translates to: HDSDPDTWLRDRALPTLITAPCL*PGPLFE
Trigger: TTCGAAAAGTGGACCCGGCCAAAGACAGGGAGCTGT...GATCAGGGTAGGGAGGGCTCTGTCTCTAAGCCAGGTGTCAGGATCAGAATCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp TACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCGATCCTCCAAAGCCCTaGAGACAAGGGAGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: YKTRQGPQSSSLCLFQSGDPPKP*RQGSQL
Trigger: CAGCTGGCTCCCTTGTCTCCAGGGCTTTGGAGGATC...GCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp GCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTCTGATCCTGACACCTaGCTTAGAGACAGAGCCCTC +
Preference number: 4 (lower is better)
Translates to: ACDSDPYKTRQGPQSSSLSDPDT*LRDRAL
Trigger: GAGGGCTCTGTCTCTAAGCCAGGTGTCAGGATCAGA...GAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp AAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAAGCACAGCATGGGAGTCAGGGTCTGATCCTGACACCTaGCTTAGAGACAGAGCCCTC +
Preference number: 4 (lower is better)
Translates to: KVPASVCFRAASTAWESGSDPDT*LRDRAL
Trigger: GAGGGCTCTGTCTCTAAGCCAGGTGTCAGGATCAGA...CCCTGACTCCCATGCTGTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp GCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAAGCACAGCATTGGCGCCTGATCTCATaGGACACGATTCAGCGCTCA +
Preference number: 4 (lower is better)
Translates to: ARTTKFQPLFVSERQAQHWRLIS*DTIQRS
Trigger: TGAGCGCTGAATCGTGTCCCATGAGATCAGGCGCCA...ATGCTGTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp CAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCTGGCGCCTGATCTCATaGGACACGATTCAGCGCTCA +
Preference number: 4 (lower is better)
Translates to: QACDSDPYKTRQGPQSSSWRLIS*DTIQRS
Trigger: TGAGCGCTGAATCGTGTCCCATGAGATCAGGCGCCA...GCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp TGCTGGCCTCTGAGACGAGCTGGTTTGTTTCCATCCCTGAAGCCTTTGGACGAGAGGAGACTTTACAGATaGCGCCTGATCTCATGGGAC +
Preference number: 4 (lower is better)
Translates to: CWPLRRAGLFPSLKPLDERRLYR*RLISWD
Trigger: GTCCCATGAGATCAGGCGCCATCTGTAAAGTCTCCT...CTCGTCCAAAGGCTTCAGGGATGGAAACAAACCAGCTCGTCTCAGAGGCCAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp CGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAAGCACAGCGCCTCTGAGACGAGCTaGTTTGTTTCCATCCCTGAA +
Preference number: 4 (lower is better)
Translates to: RQGPQSSSLCLFQSGKHSASETS*FVSIPE
Trigger: TTCAGGGATGGAAACAAACCAGCTCGTCTCAGAGGC...GCTGTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp AAAATCTTGTTGCTGTCTACCTTCCATCCAACAGGTAAATGCCTCACGACGGTGCAGGCCCCAGCTTGCTaGCCTCTGAGACGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: KILLLSTFHPTGKCLTTVQAPAC*PLRRAG
Trigger: ACCAGCTCGTCTCAGAGGCCAGCAAGCTGGGGCCTG...CACCGTCGTGAGGCATTTACCTGTTGGATGGAAGGTAGACAGCAACAAGATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp AAAATCTTGTTGCTGTCTACCTTCCATCCAACAGGTAAATGCCTCACGACGGTGATTAAGAGCCTGTGGTaGGCGGCCCGGGAGAGTGGG +
Preference number: 4 (lower is better)
Translates to: KILLLSTFHPTGKCLTTVIKSLW*AARESG
Trigger: CCCACTCTCCCGGGCCGCCCACCACAGGCTCTTAAT...CACCGTCGTGAGGCATTTACCTGTTGGATGGAAGGTAGACAGCAACAAGATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp CAGATGGCGCCTGATCTCATGGGACACGATTCAGCGCTCAATTTGGGGCTAATTTTTGGTGCAGGGCTCTaGAATGTCCAGAAGGAGCGG +
Preference number: 4 (lower is better)
Translates to: QMAPDLMGHDSALNLGLIFGAGL*NVQKER
Trigger: CCGCTCCTTCTGGACATTCCAGAGCCCTGCACCAAA...AATTAGCCCCAAATTGAGCGCTGAATCGTGTCCCATGAGATCAGGCGCCATCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp TGCTGGCCTCTGAGACGAGCTGGTTTGTTTCCATCCCTGAAGCCTTTGGACGAGCAGATCTGGACAGAGTaGTTCTCCATCCCATGGACA +
Preference number: 4 (lower is better)
Translates to: CWPLRRAGLFPSLKPLDEQIWTE*FSIPWT
Trigger: TGTCCATGGGATGGAGAACCACTCTGTCCAGATCTG...CTCGTCCAAAGGCTTCAGGGATGGAAACAAACCAGCTCGTCTCAGAGGCCAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR CCA 90 bp AAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAAGCACAGCATGGGAGTCAGGGACCCAACCCCAGATCTaGACAGAGTGGTTCTCCATC +
Preference number: 4 (lower is better)
Translates to: KVPASVCFRAASTAWESGTQPQI*TEWFSI
Trigger: GATGGAGAACCACTCTGTCCAGATCTGGGGTTGGGT...CCCTGACTCCCATGCTGTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR CCA 90 bp TGTCCAGAAGGAGCGGGAAGCAAAGGTGGCGGGACACTGCCTGAAAGGCGACAATCTAAAATTGGTAGCTaGTGTCATGACCCAACCCCA +
Preference number: 4 (lower is better)
Translates to: CPEGAGSKGGGTLPERRQSKIGS*CHDPTP
Trigger: TGGGGTTGGGTCATGACACCAGCTACCAATTTTAGA...TTGTCGCCTTTCAGGCAGTGTCCCGCCACCTTTGCTTCCCGCTCCTTCTGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR CCA 90 bp GTTGAATTCTGCCCTCACTGCAGATGTGCAGGTCAAACCCAAAGTGGTCAATGGTGGACTGGCCCAAACTaGGCCAACCTGAGCTACCCT +
Preference number: 4 (lower is better)
Translates to: VEFCPHCRCAGQTQSGQWWTGPN*ANLSYP
Trigger: AGGGTAGCTCAGGTTGGCCCAGTTTGGGCCAGTCCA...CCATTGACCACTTTGGGTTTGACCTGCACATCTGCAGTGAGGGCAGAATTCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp GGATCCAGAAATGTCTCTGGTTCGCATAGAGAGGTACCCAACTGGTCTCGGGACGCTTCTCAGCATGCCTaGCTTGTCTTGAGCATTCGC +
Preference number: 4 (lower is better)
Translates to: GSRNVSGSHREVPNWSRDASQHA*LVLSIR
Trigger: GCGAATGCTCAAGACAAGCCAGGCATGCTGAGAAGC...GTCCCGAGACCAGTTGGGTACCTCTCTATGCGAACCAGAGACATTTCTGGATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp GCTTCCAGGGCACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCAACAAGTGGCTCTTCCTaGAGGTTGTCACAGCAACCA +
Preference number: 4 (lower is better)
Translates to: ASRAQACDSDPYKTRQGPTSGSS*RLSQQP
Trigger: TGGTTGCTGTGACAACCTCCAGGAAGAGCCACTTGT...TGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTGCCCTGGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp GATCCTGACACCTGGCTTAGAGACAGAGCCCTCCCTACCCTGATCCTCCAAAGCGCAGCAAGCTGGAAGTaGTCGTGCAAACAAGTTGAA +
Preference number: 4 (lower is better)
Translates to: DPDTWLRDRALPTLILQSAASWK*SCKQVE
Trigger: TTCAACTTGTTTGCACGACCACTTCCAGCTTGCTGC...GCTTTGGAGGATCAGGGTAGGGAGGGCTCTGTCTCTAAGCCAGGTGTCAGGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp CCGACTAGAATCTGCCCCTCGCTCATGCTTCTCCCGGCCCCTTTAGACTCTTTATTCCCCTCCCATCCCTaGATTCTTTCTGCACTACCA +
Preference number: 4 (lower is better)
Translates to: PTRICPSLMLLPAPLDSLFPSHP*ILSALP
Trigger: TGGTAGTGCAGAAAGAATCCAGGGATGGGAGGGGAA...TAAAGAGTCTAAAGGGGCCGGGAGAAGCATGAGCGAGGGGCAGATTCTAGTCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp GTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTGACACTGAAGCCTaGGTCCCAGAAGGGAGCAGA +
Preference number: 4 (lower is better)
Translates to: VTVTPTKLGKDHKVPASVCDTEA*VPEGSR
Trigger: TCTGCTCCCTTCTGGGACCCAGGCTTCAGTGTCACA...AACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp GACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTGTGACACTGAAGCCTaGGTCCCAGAAGGGAGCAGA +
Preference number: 4 (lower is better)
Translates to: DSDPYKTRQGPQSSSLCLCDTEA*VPEGSR
Trigger: TCTGCTCCCTTCTGGGACCCAGGCTTCAGTGTCACA...CAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp GATCCTGACACCTGGCTTAGAGACAGAGCCCTCCCTACCCTGATCCTCCAAAGCTACTTGCACTGTCTTTaGGGGGTCCTAGGAGAAACT +
Preference number: 4 (lower is better)
Translates to: DPDTWLRDRALPTLILQSYLHCL*GVLGET
Trigger: AGTTTCTCCTAGGACCCCCCAAAGACAGTGCAAGTA...GCTTTGGAGGATCAGGGTAGGGAGGGCTCTGTCTCTAAGCCAGGTGTCAGGATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp AGTGACAGAAAACTGTACAAGGGACAGCAGTCCCAGCCCTGCCATACACAAGAATGTACCACCATCCAGTaGGGTGCAGGTACAGGCCAG +
Preference number: 4 (lower is better)
Translates to: SDRKLYKGQQSQPCHTQECTTIQ*GAGTGQ
Trigger: CTGGCCTGTACCTGCACCCCACTGGATGGTGGTACA...TTCTTGTGTATGGCAGGGCTGGGACTGCTGTCCCTTGTACAGTTTTCTGTCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp GTTGAATTCTGCCCTCACTGCAGATGTGCAGGTCAAACCCAAAGTGGTCAATGGGGGTCACACTCAGCCTaGTCTGGCCTTAACTGGGTG +
Preference number: 4 (lower is better)
Translates to: VEFCPHCRCAGQTQSGQWGSHSA*SGLNWV
Trigger: CACCCAGTTAAGGCCAGACCAGGCTGAGTGTGACCC...CCATTGACCACTTTGGGTTTGACCTGCACATCTGCAGTGAGGGCAGAATTCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp ATGGATTTCCAGGGCATGGGCTCCCGACTAGAATCTGCCCCTCGCTCATGCTTCAATCTTCACCTGGCCTaGATCCAGAAATGTCTCTGG +
Preference number: 4 (lower is better)
Translates to: MDFQGMGSRLESAPRSCFNLHLA*IQKCLW
Trigger: CCAGAGACATTTCTGGATCCAGGCCAGGTGAAGATT...GAAGCATGAGCGAGGGGCAGATTCTAGTCGGGAGCCCATGCCCTGGAAATCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp AGGGTTTGCCGATGTGCTCGTGTCTGTGAAGGGGTTGCTTCCGGTCATCTCCTTGCCCTAATCTTCACCTaGCCTGGATCCAGAAATGTC +
Preference number: 4 (lower is better)
Translates to: RVCRCARVCEGVASGHLLALIFT*PGSRNV
Trigger: GACATTTCTGGATCCAGGCCAGGTGAAGATTAGGGC...AAGGAGATGACCGGAAGCAACCCCTTCACAGACACGAGCACATCGGCAAACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp ACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGTCCACACAGCTGCCTaGAACCCACGACTCCCGAGA +
Preference number: 4 (lower is better)
Translates to: TPTKLGKDHKVPASVCFRVHTAA*NPRLPR
Trigger: TCTCGGGAGTCGTGGGTTCCAGGCAGCTGTGTGGAC...TCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp CGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAAGCACAGCGCTGGTGTTAATGGGTaGTCGTCAGACACTCGCTTT +
Preference number: 4 (lower is better)
Translates to: RQGPQSSSLCLFQSGKHSAGVNG*SSDTRF
Trigger: AAAGCGAGTGTCTGACGACCACCCATTAACACCAGC...GCTGTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437099.6
3UTR CAA 72 bp AAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTaGTTTCAGAGCGGCAAGCACAGCATGGGAGTCAGG +
Preference number: 4 (lower is better)
Translates to: KTRQGPQSSSLC*FQSGKHSMGVR
Trigger: CCTGACTCCCATGCTGTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR TCA 90 bp ACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTAGCCAGGTGGAAGGATaGCCGTCTGGCTTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: TVTPTKLGKDHKVPASVCSQVEG*PSGFLL
Trigger: GAGAAGAAAGCCAGACGGTCATCCTTCCACCTGGCT...ACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000585266.5
CDS-3UTR TCA 90 bp AATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAATCACCAGTCACACAGTTTATTGTaGTGGTGTTTTCCTTGCTCT +
Preference number: 4 (lower is better)
Translates to: NMGEPPARLSGSPFWNHQSHSLL*WCFPCS
Trigger: AGAGCAAGGAAAACACCATCACAATAAACTGTGTGA...CTGGTGATTCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000579158.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR TCA 90 bp TACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCGGAGCCTTCCTCCTGTaGAGCCAAGGAGTTCTGAGA +
Preference number: 4 (lower is better)
Translates to: YKTRQGPQSSSLCLFQSGGAFLL*SQGVLR
Trigger: TCTCAGAACTCCTTGGCTTCACAGGAGGAAGGCTCC...GCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR TCA 90 bp AATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAATCACCAGTCTTCATGTCTTTCTTaGAGTTCTCACGGAAGTTCA +
Preference number: 4 (lower is better)
Translates to: NMGEPPARLSGSPFWNHQSSCLS*SSHGSS
Trigger: TGAACTTCCGTGAGAACTTCAAGAAAGACATGAAGA...CTGGTGATTCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000579158.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR TCA 90 bp TCCAGAAATGTCTCTGGTTCGCATAGAGAGGTACCCAACTGGTCTCGGGACTCATCTTGTTGCTCAGCTTaGTCTCCAGCTGCTGGGTCT +
Preference number: 4 (lower is better)
Translates to: SRNVSGSHREVPNWSRDSSCCSA*SPAAGS
Trigger: AGACCCAGCAGCTGGAGATCAAGCTGAGCAACAAGA...TGAGTCCCGAGACCAGTTGGGTACCTCTCTATGCGAACCAGAGACATTTCTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp AGGGCACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTTCTCCGCGCCTTCTTaGTGTCCTCCTCTGTCTTGT +
Preference number: 4 (lower is better)
Translates to: RAQACDSDPYKTRQGPQSFSAPS*CPPLSC
Trigger: ACAAGACAGAGGAGGACATCAAGAAGGCGCGGAGAA...ACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR TCA 90 bp GTTGAATTCTGCCCTCACTGCAGATGTGCAGGTCAAACCCAAAGTGGTCAATGGTTCTGGGTGCGGCTGTaGGCTGAATGGCACCTTCTA +
Preference number: 4 (lower is better)
Translates to: VEFCPHCRCAGQTQSGQWFWVRL*AEWHLL
Trigger: TAGAAGGTGCCATTCAGCTCACAGCCGCACCCAGAA...CCATTGACCACTTTGGGTTTGACCTGCACATCTGCAGTGAGGGCAGAATTCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR TCA 90 bp CATGATTCTGATCCTGACACCTGGCTTAGAGACAGAGCCCTCCCTACCCTGATCGTGATGAACAGTGGCTaGGAAAGCCAGATGTGGACT +
Preference number: 4 (lower is better)
Translates to: HDSDPDTWLRDRALPTLIVMNSG*ESQMWT
Trigger: AGTCCACATCTGGCTTTCTCAGCCACTGTTCATCAC...GATCAGGGTAGGGAGGGCTCTGTCTCTAAGCCAGGTGTCAGGATCAGAATCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR TCA 90 bp GACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAAGCACAGCATGGGAGGTGATGAACAGTGGCTaGGAAAGCCAGATGTGGACT +
Preference number: 4 (lower is better)
Translates to: DHKVPASVCFRAASTAWEVMNSG*ESQMWT
Trigger: AGTCCACATCTGGCTTTCTCAGCCACTGTTCATCAC...CTCCCATGCTGTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR TCA 90 bp GCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTTTACAGATGGCGCCTaGTCTCATGGGACACGATTC +
Preference number: 4 (lower is better)
Translates to: ACDSDPYKTRQGPQSSSLFTDGA*SHGTRF
Trigger: GAATCGTGTCCCATGAGATCAGGCGCCATCTGTAAA...GAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR TCA 90 bp GTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTGTTTGTTTCCATCCCTaGAGCCTTTGGACGAGCTGG +
Preference number: 4 (lower is better)
Translates to: VTVTPTKLGKDHKVPASVVCFHP*SLWTSW
Trigger: CCAGCTCGTCCAAAGGCTTCAGGGATGGAAACAAAC...AACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR TCA 90 bp CATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCCATCCCTaGAGCCTTTGGACGAGCTGG +
Preference number: 4 (lower is better)
Translates to: HVTVTPTKLGKDHKVPASVCFHP*SLWTSW
Trigger: CCAGCTCGTCCAAAGGCTTCAGGGATGGAAACAAAC...AGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR TCA 90 bp AGGGCACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTGTTTGTTTCCATCCCTaGAGCCTTTGGACGAGCTGG +
Preference number: 4 (lower is better)
Translates to: RAQACDSDPYKTRQGPQSVCFHP*SLWTSW
Trigger: CCAGCTCGTCCAAAGGCTTCAGGGATGGAAACAAAC...ACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR TCA 90 bp GCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAAGCACAGCATGTTTGTTTCCATCCCTaGAGCCTTTGGACGAGCTGG +
Preference number: 4 (lower is better)
Translates to: ARTTKFQPLFVSERQAQHVCFHP*SLWTSW
Trigger: CCAGCTCGTCCAAAGGCTTCAGGGATGGAAACAAAC...ATGCTGTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR TCA 90 bp CCAAACAGCAGCACTGAAAGCTTCCCAAGTCACACTCAGACCAGACTTTTCCAGCAGCTTGCTGGCCTCTaGGACGAGCTGGTTTGTTTC +
Preference number: 4 (lower is better)
Translates to: PNSSTESFPSHTQTRLFQQLAGL*DELVCF
Trigger: GAAACAAACCAGCTCGTCTCAGAGGCCAGCAAGCTG...CTGGAAAAGTCTGGTCTGAGTGTGACTTGGGAAGCTTTCAGTGCTGCTGTTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR TCA 90 bp GTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTCCAGTGCCCACCAGTaGCAGAAAACTGTACAAGGG +
Preference number: 4 (lower is better)
Translates to: VTVTPTKLGKDHKVPASVSSAHQ*QKTVQG
Trigger: CCCTTGTACAGTTTTCTGTCACTGGTGGGCACTGGA...AACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR TCA 90 bp AGGGCACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGTGCCCACCAGTaGCAGAAAACTGTACAAGGG +
Preference number: 4 (lower is better)
Translates to: RAQACDSDPYKTRQGPQSSSAHQ*QKTVQG
Trigger: CCCTTGTACAGTTTTCTGTCACTGGTGGGCACTGGA...ACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR TCA 90 bp CAGATGGCGCCTGATCTCATGGGACACGATTCAGCGCTCAATTTGGGGCTAATTTCCAGTGCCCACCAGTaGCAGAAAACTGTACAAGGG +
Preference number: 4 (lower is better)
Translates to: QMAPDLMGHDSALNLGLISSAHQ*QKTVQG
Trigger: CCCTTGTACAGTTTTCTGTCACTGGTGGGCACTGGA...AATTAGCCCCAAATTGAGCGCTGAATCGTGTCCCATGAGATCAGGCGCCATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR TCA 90 bp AAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAAGCACAGCATGGGAGTCAGGGGTGAGTTGTGCTTGTTaGATTCTGCCCTCACTGCAG +
Preference number: 4 (lower is better)
Translates to: KVPASVCFRAASTAWESGVSCAC*ILPSLQ
Trigger: CTGCAGTGAGGGCAGAATTCAACAAGCACAACTCAC...CCCTGACTCCCATGCTGTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR TCA 90 bp CAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCAATGCCAAGGTTGCTaGCCGGTAAGACCCCTGAAA +
Preference number: 4 (lower is better)
Translates to: QACDSDPYKTRQGPQSSSQCQGC*PVRPLK
Trigger: TTTCAGGGGTCTTACCGGTCAGCAACCTTGGCATTG...GCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp CTGTTTGTTTCAGAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCGGTCTGGTGACCAGGTaGTTAAAATCTTGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: LFVSERQAQHGSQGVFSLGLVTR*LKSCCC
Trigger: ACAGCAACAAGATTTTAATCACCTGGTCACCAGACC...GAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTCTGAAACAAACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp AATTCTGCCCTCACTGCAGATGTGCAGGTCAAACCCAAAGTGGTCAATGGGAAAATGGTCTCGATCTCCTaGCCTCGTGATCTGCCCACC +
Preference number: 4 (lower is better)
Translates to: NSALTADVQVKPKVVNGKMVSIS*PRDLPT
Trigger: GGTGGGCAGATCACGAGGTCAGGAGATCGAGACCAT...TTTCCCATTGACCACTTTGGGTTTGACCTGCACATCTGCAGTGAGGGCAGAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp TGGGGGAAGGATGGATTGGCATTTCCAGAGGAGACTTTACAGATGGCGCCTGATCAGACCCGCCCACTTTaGATAAACCCAGCTAAGTCC +
Preference number: 4 (lower is better)
Translates to: WGKDGLAFPEETLQMAPDQTRPL*INPAKS
Trigger: GGACTTAGCTGGGTTTATTCAAAGTGGGCGGGTCTG...ATCAGGCGCCATCTGTAAAGTCTCCTCTGGAAATGCCAATCCATCCTTCCCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp GGATCCAGAAATGTCTCTGGTTCGCATAGAGAGGTACCCAACTGGTCTCGGGACGCAGGTAGAAGGGGCTaGCTTGTTCTCAGAAATGGA +
Preference number: 4 (lower is better)
Translates to: GSRNVSGSHREVPNWSRDAGRRG*LVLRNG
Trigger: TCCATTTCTGAGAACAAGTCAGCCCCTTCTACCTGC...GTCCCGAGACCAGTTGGGTACCTCTCTATGCGAACCAGAGACATTTCTGGATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp AGGGTTTGCCGATGTGCTCGTGTCTGTGAAGGGGTTGCTTCCGGTCATCTCCTTGAAACCCCTGGTTGGTaGATTCGTTGGTACACTGTT +
Preference number: 4 (lower is better)
Translates to: RVCRCARVCEGVASGHLLETPGW*IRWYTV
Trigger: AACAGTGTACCAACGAATTCACCAACCAGGGGTTTC...AAGGAGATGACCGGAAGCAACCCCTTCACAGACACGAGCACATCGGCAAACCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp GCTTCCAGGGCACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCAACAAGCCAAGGTCGCTaGTGTCCTTCGAATGTTATG +
Preference number: 4 (lower is better)
Translates to: ASRAQACDSDPYKTRQGPTSQGR*CPSNVM
Trigger: CATAACATTCGAAGGACATCAGCGACCTTGGCTTGT...TGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTGCCCTGGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp ACAGTCCTGAACACCACACGCAATCTCCAAAGGCCATCGCCCCAACCTCACCCCGTACATCATTGGAAATaGGAAAGGGAGGAGGTACAT +
Preference number: 4 (lower is better)
Translates to: TVLNTTRNLQRPSPQPHPVHHWK*EREEVH
Trigger: ATGTACCTCCTCCCTTTCTCATTTCCAATGATGTAC...GGGGTGAGGTTGGGGCGATGGCCTTTGGAGATTGCGTGTGGTGTTCAGGACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp ACCCCACTTAACATTAGAAGTGCTCTCTCCGACCTACACAAGGAATGCATCTTGACAGGCCAGGCTGTGTaGTCACCAGCTAGGCAAGGC +
Preference number: 4 (lower is better)
Translates to: TPLNIRSALSDLHKECILTGQAV*SPARQG
Trigger: GCCTTGCCTAGCTGGTGATCACACAGCCTGGCCTGT...CAAGATGCATTCCTTGTGTAGGTCGGAGAGAGCACTTCTAATGTTAAGTGGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp CATGATTCTGATCCTGACACCTGGCTTAGAGACAGAGCCCTCCCTACCCTGATCCCTTGCTCTGCTTTTTaGTTGGCGATGAGGATCCCA +
Preference number: 4 (lower is better)
Translates to: HDSDPDTWLRDRALPTLIPCSAF*LAMRIP
Trigger: TGGGATCCTCATCGCCAAGCAAAAAGCAGAGCAAGG...GATCAGGGTAGGGAGGGCTCTGTCTCTAAGCCAGGTGTCAGGATCAGAATCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp ACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGACAGCCACGGTGCCGTTaGCTTGGGGGTCCTTCTTAT +
Preference number: 4 (lower is better)
Translates to: TPTKLGKDHKVPASVCFRQPRCR*LGGPSY
Trigger: ATAAGAAGGACCCCCAAGGCAACGGCACCGTGGCTG...TCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp GTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTCTTGAGGTGAACTTCTaGTTCGTCCGCCAGGCTCTT +
Preference number: 4 (lower is better)
Translates to: VTVTPTKLGKDHKVPASVLEVNF*FVRQAL
Trigger: AAGAGCCTGGCGGACGAAGCAGAAGTTCACCTCAAG...AACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp GCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAAGCACAGCATCTTGAGGTGAACTTCTaGTTCGTCCGCCAGGCTCTT +
Preference number: 4 (lower is better)
Translates to: ARTTKFQPLFVSERQAQHLEVNF*FVRQAL
Trigger: AAGAGCCTGGCGGACGAAGCAGAAGTTCACCTCAAG...ATGCTGTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp CAGATGGCGCCTGATCTCATGGGACACGATTCAGCGCTCAATTTGGGGCTAATTCTTGAGGTGAACTTCTaGTTCGTCCGCCAGGCTCTT +
Preference number: 4 (lower is better)
Translates to: QMAPDLMGHDSALNLGLILEVNF*FVRQAL
Trigger: AAGAGCCTGGCGGACGAAGCAGAAGTTCACCTCAAG...AATTAGCCCCAAATTGAGCGCTGAATCGTGTCCCATGAGATCAGGCGCCATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp CCAAACAGCAGCACTGAAAGCTTCCCAAGTCACACTCAGACCAGACTTTTCCAGGTGTACTGGCACAGGTaGTGCCGGATCATCTCTACC +
Preference number: 4 (lower is better)
Translates to: PNSSTESFPSHTQTRLFQVYWHR*CRIIST
Trigger: GGTAGAGATGATCCGGCAGCACCTGTGCCAGTACAC...CTGGAAAAGTCTGGTCTGAGTGTGACTTGGGAAGCTTTCAGTGCTGCTGTTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR GCA 90 bp CCAAACAGCAGCACTGAAAGCTTCCCAAGTCACACTCAGACCAGACTTTTCCAGATGTTGCCCGTCTTGTaGTCTCTGACCCACAGCTCC +
Preference number: 4 (lower is better)
Translates to: PNSSTESFPSHTQTRLFQMLPVL*SLTHSS
Trigger: GGAGCTGTGGGTCAGAGAGCACAAGACGGGCAACAT...CTGGAAAAGTCTGGTCTGAGTGTGACTTGGGAAGCTTTCAGTGCTGCTGTTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR GCA 90 bp GACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAAGCACAGCATGGGAGGGGATGGCAAAGACTTaGCCTAACCCATCTCACATG +
Preference number: 4 (lower is better)
Translates to: DHKVPASVCFRAASTAWEGMAKT*PNPSHM
Trigger: CATGTGAGATGGGTTAGGGCAAGTCTTTGCCATCCC...CTCCCATGCTGTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp GTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTCAGCAGTCCCAGCCCTaGCATACACAAGAAGACAGA +
Preference number: 4 (lower is better)
Translates to: VTVTPTKLGKDHKVPASVQQSQP*HTQEDR
Trigger: TCTGTCTTCTTGTGTATGGCAGGGCTGGGACTGCTG...AACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp CATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGCTATGCCTGTCCAGTaGCCACCAGTGACAGAAAAC +
Preference number: 4 (lower is better)
Translates to: HVTVTPTKLGKDHKVPASAMPVQ*PPVTEN
Trigger: GTTTTCTGTCACTGGTGGGCACTGGACAGGCATAGC...AGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp CAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCGCTATGCCTGTCCAGTaGCCACCAGTGACAGAAAAC +
Preference number: 4 (lower is better)
Translates to: QACDSDPYKTRQGPQSSSAMPVQ*PPVTEN
Trigger: GTTTTCTGTCACTGGTGGGCACTGGACAGGCATAGC...GCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp TACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCCAAGAGAGTCTGCTATaGCTGTCCAGTGCCCACCAG +
Preference number: 4 (lower is better)
Translates to: YKTRQGPQSSSLCLFQSGQESLL*LSSAHQ
Trigger: CTGGTGGGCACTGGACAGGCATAGCAGACTCTCTTG...GCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp AATTCTGCCCTCACTGCAGATGTGCAGGTCAAACCCAAAGTGGTCAATGGGAAAGGCCACAAGAGAGTCTaGTATGCCTGTCCAGTGCCC +
Preference number: 4 (lower is better)
Translates to: NSALTADVQVKPKVVNGKGHKRV*YACPVP
Trigger: GGGCACTGGACAGGCATAGCAGACTCTCTTGTGGCC...TTTCCCATTGACCACTTTGGGTTTGACCTGCACATCTGCAGTGAGGGCAGAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR GCA 90 bp CAAAGACTTGCCCTAACCCATCTCACATGTAGGACTGACCCGGCCCCATTAAGACCCTCACTGCAGATGTaGAGGTCAAACCCAAAGTGG +
Preference number: 4 (lower is better)
Translates to: QRLALTHLTCRTDPAPLRPSLQM*RSNPKW
Trigger: CCACTTTGGGTTTGACCTGCACATCTGCAGTGAGGG...TCTTAATGGGGCCGGGTCAGTCCTACATGTGAGATGGGTTAGGGCAAGTCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR GCA 90 bp GGATTTCCAGGGCATGGGCTCCCGACTAGAATCTGCCCCTCGCTCATGCTTCTCAGGAGAGCAGAGGAATaGCCATCTTACATACAACTA +
Preference number: 4 (lower is better)
Translates to: GFPGHGLPTRICPSLMLLRRAEE*PSYIQL
Trigger: TAGTTGTATGTAAGATGGGCATTCCTCTGCTCTCCT...GAGAAGCATGAGCGAGGGGCAGATTCTAGTCGGGAGCCCATGCCCTGGAAATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp ACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCATCACCCAAGCTGGAGTaGAGTGGCCCGATCTTGGTT +
Preference number: 4 (lower is better)
Translates to: TKLGKDHKVPASVCFRAASPKLE*SGPILV
Trigger: AACCAAGATCGGGCCACTGCACTCCAGCTTGGGTGA...TGCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp TGCTGGCCTCTGAGACGAGCTGGTTTGTTTCCATCCCTGAAGCCTTTGGACGAGATAATCAATCAGGGTTaGCAGGGAAAGAGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: CWPLRRAGLFPSLKPLDEIINQG*QGKRAG
Trigger: TCCTGCCCTCTTTCCCTGGCAACCCTGATTGATTAT...CTCGTCCAAAGGCTTCAGGGATGGAAACAAACCAGCTCGTCTCAGAGGCCAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp TGCTGGCCTCTGAGACGAGCTGGTTTGTTTCCATCCCTGAAGCCTTTGGACGAGAGAGTAGTACGCCCATaGAATGAAATACTTCCCGGC +
Preference number: 4 (lower is better)
Translates to: CWPLRRAGLFPSLKPLDERVVRP*NEILPG
Trigger: GCCGGGAAGTATTTCATTGCATGGGCGTACTACTCT...CTCGTCCAAAGGCTTCAGGGATGGAAACAAACCAGCTCGTCTCAGAGGCCAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp CAGATGGCGCCTGATCTCATGGGACACGATTCAGCGCTCAATTTGGGGCTAATTTGTCCATGCTGCTTCTaGTCGCCTTTCAAAGCCTCC +
Preference number: 4 (lower is better)
Translates to: QMAPDLMGHDSALNLGLICPCCF*SPFKAS
Trigger: GGAGGCTTTGAAAGGCGAGCAGAAGCAGCATGGACA...AATTAGCCCCAAATTGAGCGCTGAATCGTGTCCCATGAGATCAGGCGCCATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp ACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAAGCACAGCATGGGAGTTGTCCATGCTGCTTCTaGTCGCCTTTCAAAGCCTCC +
Preference number: 4 (lower is better)
Translates to: TTKFQPLFVSERQAQHGSCPCCF*SPFKAS
Trigger: GGAGGCTTTGAAAGGCGAGCAGAAGCAGCATGGACA...ACTCCCATGCTGTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp ACAGTCCTGAACACCACACGCAATCTCCAAAGGCCATCGCCCCAACCTCACCCCCTTGAGGCAATTCTATaGACGATTGTGCAGATGAGA +
Preference number: 4 (lower is better)
Translates to: TVLNTTRNLQRPSPQPHPLEAIL*TIVQMR
Trigger: TCTCATCTGCACAATCGTGCATAGAATTGCCTCAAG...GGGGTGAGGTTGGGGCGATGGCCTTTGGAGATTGCGTGTGGTGTTCAGGACTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp GCCAAGGTCGCTGATGTCCTTCGAATGTTATGGCTTGTATTTCCAAAAGGGACTCACCATCCAGTGGGGTaGAGGTACAGGCCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: AKVADVLRMLWLVFPKGTHHPVG*RYRPGC
Trigger: ACAGCCTGGCCTGTACCTGCACCCCACTGGATGGTG...AGTCCCTTTTGGAAATACAAGCCATAACATTCGAAGGACATCAGCGACCTTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp TTTGTTTCAGAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGACTCGCTCTAACCTGCTaGAATGGGAATTGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: FVSERQAQHGSQGVFSLRLALTC*NGNCFF
Trigger: GAAGAAGCAATTCCCATTGCAGCAGGTTAGAGCGAG...TCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTCTGAAACAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp TGTTTCAGAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGAGAATTCTCGCTCTAACCTaGTGCAATGGGAATTGCTTC +
Preference number: 4 (lower is better)
Translates to: CFRAASTAWESGGLQPQRILALT*CNGNCF
Trigger: GAAGCAATTCCCATTGCAGCAGGTTAGAGCGAGAAT...TCTCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTCTGAAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp ACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTGAGAGAGCACCCACGTaGCCTGACCTTACATTCCAC +
Preference number: 4 (lower is better)
Translates to: TVTPTKLGKDHKVPASVCERAPT*PDLTFH
Trigger: GTGGAATGTAAGGTCAGGGCACGTGGGTGCTCTCTC...ACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp TGTTTGTTTCAGAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCACACTTTCATAGGGTTTaGCGATGTGCTCGTGTCTGT +
Preference number: 4 (lower is better)
Translates to: CLFQSGKHSMGVRGSSASHFHRV*RCARVC
Trigger: ACAGACACGAGCACATCGGCAAACCCTATGAAAGTG...TGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTCTGAAACAAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp TACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCTGGGACGTTCCCAGGTaGTCTCATTGGTGGTCGTGT +
Preference number: 4 (lower is better)
Translates to: YKTRQGPQSSSLCLFQSGWDVPR*SHWWSC
Trigger: ACACGACCACCAATGAGACCACCTGGGAACGTCCCA...GCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000585266.5
CDS-3UTR CCA 90 bp AAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAAGCACAGCATGGGAGTCAGGGGTATCCATTCACTGTTaGAGGCAGAGAGCTCCTGTG +
Preference number: 4 (lower is better)
Translates to: KVPASVCFRAASTAWESGVSIHC*RQRAPV
Trigger: CACAGGAGCTCTCTGCCTCCAACAGTGAATGGATAC...CCCTGACTCCCATGCTGTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000585266.5
CDS-3UTR CCA 90 bp TCCAGGGCACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAGTATCCATTCACTGTTaGAGGCAGAGAGCTCCTGTG +
Preference number: 4 (lower is better)
Translates to: SRAQACDSDPYKTRQGPQVSIHC*RQRAPV
Trigger: CACAGGAGCTCTCTGCCTCCAACAGTGAATGGATAC...TTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTGCCCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000585266.5
CDS-3UTR CCA 90 bp GTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTGGGGTCCCTGATGCGTaGTATCCATTCACTGTTGGA +
Preference number: 4 (lower is better)
Translates to: VTVTPTKLGKDHKVPASVGVPDA*YPFTVG
Trigger: TCCAACAGTGAATGGATACCACGCATCAGGGACCCC...AACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000585266.5
CDS-3UTR CCA 90 bp AGGGCACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTGGGGTCCCTGATGCGTaGTATCCATTCACTGTTGGA +
Preference number: 4 (lower is better)
Translates to: RAQACDSDPYKTRQGPQSGVPDA*YPFTVG
Trigger: TCCAACAGTGAATGGATACCACGCATCAGGGACCCC...ACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000585266.5
CDS-3UTR CCA 90 bp AGTAAGGGTTTGGTGCAGGGCTCTGGAATGTCCAGAAGGAGCGGGAAGCAAAGGTCTGGGAATCACCGGTaGATTTTCGGACACTCATGT +
Preference number: 4 (lower is better)
Translates to: SKGLVQGSGMSRRSGKQRSGNHR*IFGHSC
Trigger: ACATGAGTGTCCGAAAATCCACCGGTGATTCCCAGA...CCTTTGCTTCCCGCTCCTTCTGGACATTCCAGAGCCCTGCACCAAACCCTTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR CCA 90 bp CCAAACAGCAGCACTGAAAGCTTCCCAAGTCACACTCAGACCAGACTTTTCCAGTTCCGGCATCGTGTCTaGGTGAGGGAACGTCACACA +
Preference number: 4 (lower is better)
Translates to: PNSSTESFPSHTQTRLFQFRHRV*VRERHT
Trigger: TGTGTGACGTTCCCTCACCCAGACACGATGCCGGAA...CTGGAAAAGTCTGGTCTGAGTGTGACTTGGGAAGCTTTCAGTGCTGCTGTTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR CCA 90 bp GACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGGTAGCTCCACTCGGTTaGTTTCAGCAGCTGCTGTTC +
Preference number: 4 (lower is better)
Translates to: DSDPYKTRQGPQSSSLCLVAPLG*FQQLLF
Trigger: GAACAGCAGCTGCTGAAACCAACCGAGTGGAGCTAC...CAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000583882.5
ENST00000585266.5
CDS-3UTR CCA 90 bp CAGATGGCGCCTGATCTCATGGGACACGATTCAGCGCTCAATTTGGGGCTAATTGTAGCTCCACTCGGTTaGTTTCAGCAGCTGCTGTTC +
Preference number: 4 (lower is better)
Translates to: QMAPDLMGHDSALNLGLIVAPLG*FQQLLF
Trigger: GAACAGCAGCTGCTGAAACCAACCGAGTGGAGCTAC...AATTAGCCCCAAATTGAGCGCTGAATCGTGTCCCATGAGATCAGGCGCCATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp AGGGCACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTCGAAGGTCGGCAATGTaGTGGTCGCACTTCTTCATG +
Preference number: 4 (lower is better)
Translates to: RAQACDSDPYKTRQGPQSRRSAM*WSHFFM
Trigger: CATGAAGAAGTGCGACCACCACATTGCCGACCTTCG...ACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp TGGGGGAAGGATGGATTGGCATTTCCAGAGGAGACTTTACAGATGGCGCCTGATCGAAGGTCGGCAATGTaGTGGTCGCACTTCTTCATG +
Preference number: 4 (lower is better)
Translates to: WGKDGLAFPEETLQMAPDRRSAM*WSHFFM
Trigger: CATGAAGAAGTGCGACCACCACATTGCCGACCTTCG...ATCAGGCGCCATCTGTAAAGTCTCCTCTGGAAATGCCAATCCATCCTTCCCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp TGTTTCAGAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGAGATCTCTTCAAACCATTTaGACTGGGCCTGGTTGTAGA +
Preference number: 4 (lower is better)
Translates to: CFRAASTAWESGGLQPQRSLQTI*TGPGCR
Trigger: TCTACAACCAGGCCCAGTCCAAATGGTTTGAAGAGA...TCTCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTCTGAAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp TGCTGGCCTCTGAGACGAGCTGGTTTGTTTCCATCCCTGAAGCCTTTGGACGAGGCTCTAGCTCCAATGTaGTGGTCACCATCTCTTCAA +
Preference number: 4 (lower is better)
Translates to: CWPLRRAGLFPSLKPLDEALAPM*WSPSLQ
Trigger: TTGAAGAGATGGTGACCACCACATTGGAGCTAGAGC...CTCGTCCAAAGGCTTCAGGGATGGAAACAAACCAGCTCGTCTCAGAGGCCAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp AGTAAGGGTTTGGTGCAGGGCTCTGGAATGTCCAGAAGGAGCGGGAAGCAAAGGGCTCTAGCTCCAATGTaGTGGTCACCATCTCTTCAA +
Preference number: 4 (lower is better)
Translates to: SKGLVQGSGMSRRSGKQRALAPM*WSPSLQ
Trigger: TTGAAGAGATGGTGACCACCACATTGGAGCTAGAGC...CCTTTGCTTCCCGCTCCTTCTGGACATTCCAGAGCCCTGCACCAAACCCTTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp TGTTTCAGAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGAGAGGCTCGACTGTGCTTTaGTTGAACATGTCTGTTTCA +
Preference number: 4 (lower is better)
Translates to: CFRAASTAWESGGLQPQRGSTVL*LNMSVS
Trigger: TGAAACAGACATGTTCAACCAAAGCACAGTCGAGCC...TCTCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTCTGAAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp CAGATGGCGCCTGATCTCATGGGACACGATTCAGCGCTCAATTTGGGGCTAATTACAGCTCCCTGTCTTTaGCCGGGTCCACTTTTCGAA +
Preference number: 4 (lower is better)
Translates to: QMAPDLMGHDSALNLGLITAPCL*PGPLFE
Trigger: TTCGAAAAGTGGACCCGGCCAAAGACAGGGAGCTGT...AATTAGCCCCAAATTGAGCGCTGAATCGTGTCCCATGAGATCAGGCGCCATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp AATTCTGCCCTCACTGCAGATGTGCAGGTCAAACCCAAAGTGGTCAATGGGAAAGATCCTCCAAAGCCCTaGAGACAAGGGAGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: NSALTADVQVKPKVVNGKDPPKP*RQGSQL
Trigger: CAGCTGGCTCCCTTGTCTCCAGGGCTTTGGAGGATC...TTTCCCATTGACCACTTTGGGTTTGACCTGCACATCTGCAGTGAGGGCAGAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR CCA 90 bp AAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAAGCACAGCATGGGAGTCAGGGAGGAGACTTTACAGATaGCGCCTGATCTCATGGGAC +
Preference number: 4 (lower is better)
Translates to: KVPASVCFRAASTAWESGRRLYR*RLISWD
Trigger: GTCCCATGAGATCAGGCGCCATCTGTAAAGTCTCCT...CCCTGACTCCCATGCTGTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp GACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAAGCACAGCATGGGAGGCCTCTGAGACGAGCTaGTTTGTTTCCATCCCTGAA +
Preference number: 4 (lower is better)
Translates to: DHKVPASVCFRAASTAWEASETS*FVSIPE
Trigger: TTCAGGGATGGAAACAAACCAGCTCGTCTCAGAGGC...CTCCCATGCTGTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp TCCAGGGCACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAGCCTCTGAGACGAGCTaGTTTGTTTCCATCCCTGAA +
Preference number: 4 (lower is better)
Translates to: SRAQACDSDPYKTRQGPQASETS*FVSIPE
Trigger: TTCAGGGATGGAAACAAACCAGCTCGTCTCAGAGGC...TTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTGCCCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp CAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCGGCGACAACCTAGTGTaGCCACAAGAGAGTCTGCTA +
Preference number: 4 (lower is better)
Translates to: QACDSDPYKTRQGPQSSSGDNLV*PQESLL
Trigger: TAGCAGACTCTCTTGTGGCCACACTAGGTTGTCGCC...GCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp TGGGGGAAGGATGGATTGGCATTTCCAGAGGAGACTTTACAGATGGCGCCTGATGGCGACAACCTAGTGTaGCCACAAGAGAGTCTGCTA +
Preference number: 4 (lower is better)
Translates to: WGKDGLAFPEETLQMAPDGDNLV*PQESLL
Trigger: TAGCAGACTCTCTTGTGGCCACACTAGGTTGTCGCC...ATCAGGCGCCATCTGTAAAGTCTCCTCTGGAAATGCCAATCCATCCTTCCCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp GATCCTGACACCTGGCTTAGAGACAGAGCCCTCCCTACCCTGATCCTCCAAAGCGACTTTTCCAGGGATTaGAAGATGGAGAGAGGGAAA +
Preference number: 4 (lower is better)
Translates to: DPDTWLRDRALPTLILQSDFSRD*KMERGK
Trigger: TTTCCCTCTCTCCATCTTCCAATCCCTGGAAAAGTC...GCTTTGGAGGATCAGGGTAGGGAGGGCTCTGTCTCTAAGCCAGGTGTCAGGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR CCA 90 bp GAAAACTGTACAAGGGACAGCAGTCCCAGCCCTGCCATACACAAGAAGACAGAGCCTCCAAAAATGGACTaGCCCAAACTGGGCCAACCT +
Preference number: 4 (lower is better)
Translates to: ENCTRDSSPSPAIHKKTEPPKMD*PKLGQP
Trigger: AGGTTGGCCCAGTTTGGGCCAGTCCATTTTTGGAGG...CTCTGTCTTCTTGTGTATGGCAGGGCTGGGACTGCTGTCCCTTGTACAGTTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp GCACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTGCCGAATAGTTaGGACTACAGGTGTGCACCA +
Preference number: 4 (lower is better)
Translates to: AQACDSDPYKTRQGPQSSSLPNS*DYRCAP
Trigger: TGGTGCACACCTGTAGTCCCAACTATTCGGCAGGCT...GGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp CATCTCACATGTAGGACTGACCCGGCCCCATTAAGAGCCTGTGGTGGGCGGCCCACTTGTTCTCAGAAATaGAAGGGACATTCTCAAGAA +
Preference number: 4 (lower is better)
Translates to: HLTCRTDPAPLRACGGRPTCSQK*KGHSQE
Trigger: TTCTTGAGAATGTCCCTTCCATTTCTGAGAACAAGT...GGGCCGCCCACCACAGGCTCTTAATGGGGCCGGGTCAGTCCTACATGTGAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp TGGGGGAAGGATGGATTGGCATTTCCAGAGGAGACTTTACAGATGGCGCCTGATAGGGAGCAGATCTGCTaGCTGAGATGCAAGCTTCAG +
Preference number: 4 (lower is better)
Translates to: WGKDGLAFPEETLQMAPDREQIC*LRCKLQ
Trigger: CTGAAGCTTGCATCTCAGCCAGCAGATCTGCTCCCT...ATCAGGCGCCATCTGTAAAGTCTCCTCTGGAAATGCCAATCCATCCTTCCCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp CCGACTAGAATCTGCCCCTCGCTCATGCTTCTCCCGGCCCCTTTAGACTCTTTATACTTGCACTGTCTTTaGGGGGTCCTAGGAGAAACT +
Preference number: 4 (lower is better)
Translates to: PTRICPSLMLLPAPLDSLYLHCL*GVLGET
Trigger: AGTTTCTCCTAGGACCCCCCAAAGACAGTGCAAGTA...TAAAGAGTCTAAAGGGGCCGGGAGAAGCATGAGCGAGGGGCAGATTCTAGTCGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp CAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCAGAGAGGTACCCAACTaGTCTCGGGACTCACCTTTC +
Preference number: 4 (lower is better)
Translates to: QACDSDPYKTRQGPQSSSREVPN*SRDSPF
Trigger: GAAAGGTGAGTCCCGAGACCAGTTGGGTACCTCTCT...GCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp GCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAAGCACAGCATAGAGAGGTACCCAACTaGTCTCGGGACTCACCTTTC +
Preference number: 4 (lower is better)
Translates to: ARTTKFQPLFVSERQAQHREVPN*SRDSPF
Trigger: GAAAGGTGAGTCCCGAGACCAGTTGGGTACCTCTCT...ATGCTGTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp CGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAAGCACAGCAATCTTCACCTGGCCTaGATCCAGAAATGTCTCTGG +
Preference number: 4 (lower is better)
Translates to: RQGPQSSSLCLFQSGKHSNLHLA*IQKCLW
Trigger: CCAGAGACATTTCTGGATCCAGGCCAGGTGAAGATT...GCTGTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp GCCAAGGTCGCTGATGTCCTTCGAATGTTATGGCTTGTATTTCCAAAAGGGACTGTCCACACAGCTGCCTaGAACCCACGACTCCCGAGA +
Preference number: 4 (lower is better)
Translates to: AKVADVLRMLWLVFPKGTVHTAA*NPRLPR
Trigger: TCTCGGGAGTCGTGGGTTCCAGGCAGCTGTGTGGAC...AGTCCCTTTTGGAAATACAAGCCATAACATTCGAAGGACATCAGCGACCTTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp CACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCATTGAATGTCTGTCCCTaGGTCCACACAGCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: HKHVTVTPTKLGKDHKVPLNVCP*VHTAAW
Trigger: CCAGGCAGCTGTGTGGACCCAGGGACAGACATTCAA...TGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp GTTGAATTCTGCCCTCACTGCAGATGTGCAGGTCAAACCCAAAGTGGTCAATGGTTGAATGTCTGTCCCTaGGTCCACACAGCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: VEFCPHCRCAGQTQSGQWLNVCP*VHTAAW
Trigger: CCAGGCAGCTGTGTGGACCCAGGGACAGACATTCAA...CCATTGACCACTTTGGGTTTGACCTGCACATCTGCAGTGAGGGCAGAATTCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp TGTCCAGAAGGAGCGGGAAGCAAAGGTGGCGGGACACTGCCTGAAAGGCGACAATCACACAGTTTATTGTaGTGGTGTTTTCCTTGCTCT +
Preference number: 4 (lower is better)
Translates to: CPEGAGSKGGGTLPERRQSHSLL*WCFPCS
Trigger: AGAGCAAGGAAAACACCATCACAATAAACTGTGTGA...TTGTCGCCTTTCAGGCAGTGTCCCGCCACCTTTGCTTCCCGCTCCTTCTGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR TCA 90 bp ACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCAGAGAACTTGAGGTaGACTTCTGCTTCGTCCGCC +
Preference number: 4 (lower is better)
Translates to: TPTKLGKDHKVPASVCFRAENLR*TSASSA
Trigger: GGCGGACGAAGCAGAAGTTCACCTCAAGTTCTCTGC...TCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR TCA 90 bp TCCAGAAATGTCTCTGGTTCGCATAGAGAGGTACCCAACTGGTCTCGGGACTCAGCTTGGCAGAGAACTTaGGGTGAACTTCTGCTTCGT +
Preference number: 4 (lower is better)
Translates to: SRNVSGSHREVPNWSRDSAWQRT*GELLLR
Trigger: ACGAAGCAGAAGTTCACCTCAAGTTCTCTGCCAAGC...TGAGTCCCGAGACCAGTTGGGTACCTCTCTATGCGAACCAGAGACATTTCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp CAAAGACTTGCCCTAACCCATCTCACATGTAGGACTGACCCGGCCCCATTAAGAGCTTGGCAGAGAACTTaGGGTGAACTTCTGCTTCGT +
Preference number: 4 (lower is better)
Translates to: QRLALTHLTCRTDPAPLRAWQRT*GELLLR
Trigger: ACGAAGCAGAAGTTCACCTCAAGTTCTCTGCCAAGC...TCTTAATGGGGCCGGGTCAGTCCTACATGTGAGATGGGTTAGGGCAAGTCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR TCA 90 bp TGGGGGAAGGATGGATTGGCATTTCCAGAGGAGACTTTACAGATGGCGCCTGATGCTTGGCAGAGAACTTaGGGTGAACTTCTGCTTCGT +
Preference number: 4 (lower is better)
Translates to: WGKDGLAFPEETLQMAPDAWQRT*GELLLR
Trigger: ACGAAGCAGAAGTTCACCTCAAGTTCTCTGCCAAGC...ATCAGGCGCCATCTGTAAAGTCTCCTCTGGAAATGCCAATCCATCCTTCCCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR TCA 90 bp GCATGCCTGGCTTGTCTTGAGCATTCGCTGAATGAATGCAGATTAATCAGAACAGATCCACACAGCGCATaGGGTCGTCTCCAGCCTGTG +
Preference number: 4 (lower is better)
Translates to: ACLACLEHSLNECRLIRTDPHSA*GRLQPV
Trigger: CACAGGCTGGAGACGACCTCATGCGCTGTGTGGATC...TGTTCTGATTAATCTGCATTCATTCAGCGAATGCTCAAGACAAGCCAGGCATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp GACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGGTGATGAACAGTGGCTaGGAAAGCCAGATGTGGACT +
Preference number: 4 (lower is better)
Translates to: DSDPYKTRQGPQSSSLCLVMNSG*ESQMWT
Trigger: AGTCCACATCTGGCTTTCTCAGCCACTGTTCATCAC...CAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR TCA 90 bp GTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTTTACAGATGGCGCCTaGTCTCATGGGACACGATTC +
Preference number: 4 (lower is better)
Translates to: VTVTPTKLGKDHKVPASVFTDGA*SHGTRF
Trigger: GAATCGTGTCCCATGAGATCAGGCGCCATCTGTAAA...AACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR TCA 90 bp ACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAAGCACAGCATGGGAGTTTTACAGATGGCGCCTaGTCTCATGGGACACGATTC +
Preference number: 4 (lower is better)
Translates to: TTKFQPLFVSERQAQHGSFTDGA*SHGTRF
Trigger: GAATCGTGTCCCATGAGATCAGGCGCCATCTGTAAA...ACTCCCATGCTGTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR TCA 90 bp GGATTTCCAGGGCATGGGCTCCCGACTAGAATCTGCCCCTCGCTCATGCTTCTCTTAGACTCTTTAGACTaGCATGGTGGAGAATGTGTT +
Preference number: 4 (lower is better)
Translates to: GFPGHGLPTRICPSLMLLLDSLD*HGGECV
Trigger: AACACATTCTCCACCATGTCAGTCTAAAGAGTCTAA...GAGAAGCATGAGCGAGGGGCAGATTCTAGTCGGGAGCCCATGCCCTGGAAATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR TCA 90 bp ATGGATTTCCAGGGCATGGGCTCCCGACTAGAATCTGCCCCTCGCTCATGCTTCGGTCAATGGGAAAGATaGAGAAAGATGGATTTCCAG +
Preference number: 4 (lower is better)
Translates to: MDFQGMGSRLESAPRSCFGQWER*RKMDFQ
Trigger: CTGGAAATCCATCTTTCTTCATCTTTCCCATTGACC...GAAGCATGAGCGAGGGGCAGATTCTAGTCGGGAGCCCATGCCCTGGAAATCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR TCA 90 bp CCGACTAGAATCTGCCCCTCGCTCATGCTTCTCCCGGCCCCTTTAGACTCTTTACTCACTGGTTACCCTTaGGCTTCACTTTCCTATTTG +
Preference number: 4 (lower is better)
Translates to: PTRICPSLMLLPAPLDSLLTGYP*ASLSYL
Trigger: CAAATAGGAAAGTGAAGCTCAAGGGTAACCAGTGAG...TAAAGAGTCTAAAGGGGCCGGGAGAAGCATGAGCGAGGGGCAGATTCTAGTCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp ACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCACAGACCCGCCCACTTTaGATAAACCCAGCTAAGTCC +
Preference number: 4 (lower is better)
Translates to: TKLGKDHKVPASVCFRAAQTRPL*INPAKS
Trigger: GGACTTAGCTGGGTTTATTCAAAGTGGGCGGGTCTG...TGCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp CCGACTAGAATCTGCCCCTCGCTCATGCTTCTCCCGGCCCCTTTAGACTCTTTACCTATGTGTTGCCACTaGCTGAAAGCACTAGAAAGA +
Preference number: 4 (lower is better)
Translates to: PTRICPSLMLLPAPLDSLPMCCH*LKALER
Trigger: TCTTTCTAGTGCTTTCAGTCAGTGGCAACACATAGG...TAAAGAGTCTAAAGGGGCCGGGAGAAGCATGAGCGAGGGGCAGATTCTAGTCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp ACCCCACTTAACATTAGAAGTGCTCTCTCCGACCTACACAAGGAATGCATCTTGTGGCCAACAGGGTGCTaGGTGGAGGTAGAAAGGAGG +
Preference number: 4 (lower is better)
Translates to: TPLNIRSALSDLHKECILWPTGC*VEVERR
Trigger: CCTCCTTTCTACCTCCACTCAGCACCCTGTTGGCCA...CAAGATGCATTCCTTGTGTAGGTCGGAGAGAGCACTTCTAATGTTAAGTGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp TGTCCAGAAGGAGCGGGAAGCAAAGGTGGCGGGACACTGCCTGAAAGGCGACAAAAGGCGACATCAGTGTaGCTCCATTTATATGACATT +
Preference number: 4 (lower is better)
Translates to: CPEGAGSKGGGTLPERRQKATSV*LHLYDI
Trigger: AATGTCATATAAATGGAGTCACACTGATGTCGCCTT...TTGTCGCCTTTCAGGCAGTGTCCCGCCACCTTTGCTTCCCGCTCCTTCTGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp CATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTAGTACGCCCATGCAATaGAATACTTCCCGGCAAGGA +
Preference number: 4 (lower is better)
Translates to: HVTVTPTKLGKDHKVPASSTPMQ*NTSRQG
Trigger: TCCTTGCCGGGAAGTATTTCATTGCATGGGCGTACT...AGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp CAGATGGCGCCTGATCTCATGGGACACGATTCAGCGCTCAATTTGGGGCTAATTAGTACGCCCATGCAATaGAATACTTCCCGGCAAGGA +
Preference number: 4 (lower is better)
Translates to: QMAPDLMGHDSALNLGLISTPMQ*NTSRQG
Trigger: TCCTTGCCGGGAAGTATTTCATTGCATGGGCGTACT...AATTAGCCCCAAATTGAGCGCTGAATCGTGTCCCATGAGATCAGGCGCCATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp TACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCGTCGTGCAAACAAGTTaGAGACCCTGGGCCAAGAAC +
Preference number: 4 (lower is better)
Translates to: YKTRQGPQSSSLCLFQSGVVQTS*RPWAKN
Trigger: GTTCTTGGCCCAGGGTCTTCAACTTGTTTGCACGAC...GCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp AGTGACAGAAAACTGTACAAGGGACAGCAGTCCCAGCCCTGCCATACACAAGAAGCCAAAAGGCGAGTGTaGGCCCTAAGAACAGCTTGT +
Preference number: 4 (lower is better)
Translates to: SDRKLYKGQQSQPCHTQEAKRRV*ALRTAC
Trigger: ACAAGCTGTTCTTAGGGCTCACACTCGCCTTTTGGC...TTCTTGTGTATGGCAGGGCTGGGACTGCTGTCCCTTGTACAGTTTTCTGTCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp AATTCTGCCCTCACTGCAGATGTGCAGGTCAAACCCAAAGTGGTCAATGGGAAAAGGTTGCAGCAGACGTaGGCAGCAATTGAGCACCCA +
Preference number: 4 (lower is better)
Translates to: NSALTADVQVKPKVVNGKRLQQT*AAIEHP
Trigger: TGGGTGCTCAATTGCTGCTCACGTCTGCTGCAACCT...TTTCCCATTGACCACTTTGGGTTTGACCTGCACATCTGCAGTGAGGGCAGAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp TCCAGGGCACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAATCTCTCACCAGGACTTaGGGCAATTCTATGCACGAT +
Preference number: 4 (lower is better)
Translates to: SRAQACDSDPYKTRQGPQSLTRT*GNSMHD
Trigger: ATCGTGCATAGAATTGCCTCAAGTCCTGGTGAGAGA...TTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTGCCCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp ATGGATTTCCAGGGCATGGGCTCCCGACTAGAATCTGCCCCTCGCTCATGCTTCTCAAAGATCGACGAATaGGATCCAAACGGTCATTAC +
Preference number: 4 (lower is better)
Translates to: MDFQGMGSRLESAPRSCFSKIDE*DPNGHY
Trigger: GTAATGACCGTTTGGATCTCATTCGTCGATCTTTGA...GAAGCATGAGCGAGGGGCAGATTCTAGTCGGGAGCCCATGCCCTGGAAATCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp TACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCACTGAGCAGGGGGCATaGACAAGACACAGCTTAGTG +
Preference number: 4 (lower is better)
Translates to: YKTRQGPQSSSLCLFQSGTEQGA*TRHSLV
Trigger: CACTAAGCTGTGTCTTGTTCATGCCCCCTGCTCAGT...GCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp AATGTCCAGAAGGAGCGGGAAGCAAAGGTGGCGGGACACTGCCTGAAAGGCGACATCAATTTTATTTACTaGTCTAGGCAGCCAGAGGGT +
Preference number: 4 (lower is better)
Translates to: NVQKEREAKVAGHCLKGDINFIY*SRQPEG
Trigger: ACCCTCTGGCTGCCTAGATCAGTAAATAAAATTGAT...GTCGCCTTTCAGGCAGTGTCCCGCCACCTTTGCTTCCCGCTCCTTCTGGACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp GCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAAGCACAGCATCCTTGCTCTGCTTTTTaGTTGGCGATGAGGATCCCA +
Preference number: 4 (lower is better)
Translates to: ARTTKFQPLFVSERQAQHPCSAF*LAMRIP
Trigger: TGGGATCCTCATCGCCAAGCAAAAAGCAGAGCAAGG...ATGCTGTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp CAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCCTTGCTCTGCTTTTTaGTTGGCGATGAGGATCCCA +
Preference number: 4 (lower is better)
Translates to: QACDSDPYKTRQGPQSSSPCSAF*LAMRIP
Trigger: TGGGATCCTCATCGCCAAGCAAAAAGCAGAGCAAGG...GCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000583882.5
ENST00000585266.5
CDS-3UTR GCA 90 bp CCGACTAGAATCTGCCCCTCGCTCATGCTTCTCCCGGCCCCTTTAGACTCTTTAGTGTTTTCCTTGCTCTaGTTTTTGCTTGGCGATGAG +
Preference number: 4 (lower is better)
Translates to: PTRICPSLMLLPAPLDSLVFSLL*FLLGDE
Trigger: CTCATCGCCAAGCAAAAAGCAGAGCAAGGAAAACAC...TAAAGAGTCTAAAGGGGCCGGGAGAAGCATGAGCGAGGGGCAGATTCTAGTCGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR GCA 90 bp TGCTGGCCTCTGAGACGAGCTGGTTTGTTTCCATCCCTGAAGCCTTTGGACGAGGTGTTTTCCTTGCTCTaGTTTTTGCTTGGCGATGAG +
Preference number: 4 (lower is better)
Translates to: CWPLRRAGLFPSLKPLDEVFSLL*FLLGDE
Trigger: CTCATCGCCAAGCAAAAAGCAGAGCAAGGAAAACAC...CTCGTCCAAAGGCTTCAGGGATGGAAACAAACCAGCTCGTCTCAGAGGCCAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp CACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGTTGGTTTCAGCAGCTaGTGTTCCGGCATCGTGTCT +
Preference number: 4 (lower is better)
Translates to: HKHVTVTPTKLGKDHKVPVGFSS*CSGIVS
Trigger: AGACACGATGCCGGAACAGCAGCTGCTGAAACCAAC...TGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000583882.5
ENST00000585266.5
CDS-3UTR GCA 90 bp ACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTGTTGGTTTCAGCAGCTaGTGTTCCGGCATCGTGTCT +
Preference number: 4 (lower is better)
Translates to: TVTPTKLGKDHKVPASVCVGFSS*CSGIVS
Trigger: AGACACGATGCCGGAACAGCAGCTGCTGAAACCAAC...ACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000583882.5
ENST00000585266.5
CDS-3UTR GCA 90 bp TTTGTTTCAGAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGACCTTCTGCATTTGTTTaGCCTTCAGCTGTTTCTGGA +
Preference number: 4 (lower is better)
Translates to: FVSERQAQHGSQGVFSLRPSAFV*PSAVSG
Trigger: TCCAGAAACAGCTGAAGGGCAAACAAATGCAGAAGG...TCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTCTGAAACAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp CCGACTAGAATCTGCCCCTCGCTCATGCTTCTCCCGGCCCCTTTAGACTCTTTACCTTCTGCATTTGTTTaGCCTTCAGCTGTTTCTGGA +
Preference number: 4 (lower is better)
Translates to: PTRICPSLMLLPAPLDSLPSAFV*PSAVSG
Trigger: TCCAGAAACAGCTGAAGGGCAAACAAATGCAGAAGG...TAAAGAGTCTAAAGGGGCCGGGAGAAGCATGAGCGAGGGGCAGATTCTAGTCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR GCA 90 bp GTTGAATTCTGCCCTCACTGCAGATGTGCAGGTCAAACCCAAAGTGGTCAATGGAGCTTGATCTCCAGCTaGTGGGTCTTCATCTCCAGG +
Preference number: 4 (lower is better)
Translates to: VEFCPHCRCAGQTQSGQWSLISS*WVFISR
Trigger: CCTGGAGATGAAGACCCAGCAGCTGGAGATCAAGCT...CCATTGACCACTTTGGGTTTGACCTGCACATCTGCAGTGAGGGCAGAATTCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR GCA 90 bp ACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGTGTACTGGCACAGGTaGTGCCGGATCATCTCTACC +
Preference number: 4 (lower is better)
Translates to: TPTKLGKDHKVPASVCFRVYWHR*CRIIST
Trigger: GGTAGAGATGATCCGGCAGCACCTGTGCCAGTACAC...TCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp AAAATCTTGTTGCTGTCTACCTTCCATCCAACAGGTAAATGCCTCACGACGGTGGTTTCATGCCGCAGCTaGGTGTACTGGCACAGGTGC +
Preference number: 4 (lower is better)
Translates to: KILLLSTFHPTGKCLTTVVSCRS*VYWHRC
Trigger: GCACCTGTGCCAGTACACGCAGCTGCGGCATGAAAC...CACCGTCGTGAGGCATTTACCTGTTGGATGGAAGGTAGACAGCAACAAGATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp GCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAAGCACAGCATAACATGTCTGTTTCATaGCGCAGCTGCGTGTACTGG +
Preference number: 4 (lower is better)
Translates to: ARTTKFQPLFVSERQAQHNMSVS*RSCVYW
Trigger: CCAGTACACGCAGCTGCGGCATGAAACAGACATGTT...ATGCTGTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp TCCAGAAATGTCTCTGGTTCGCATAGAGAGGTACCCAACTGGTCTCGGGACTCAGGGATGGCAAAGACTTaGCCTAACCCATCTCACATG +
Preference number: 4 (lower is better)
Translates to: SRNVSGSHREVPNWSRDSGMAKT*PNPSHM
Trigger: CATGTGAGATGGGTTAGGGCAAGTCTTTGCCATCCC...TGAGTCCCGAGACCAGTTGGGTACCTCTCTATGCGAACCAGAGACATTTCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp GCCAAGGTCGCTGATGTCCTTCGAATGTTATGGCTTGTATTTCCAAAAGGGACTGGCCACAAGAGAGTCTaGTATGCCTGTCCAGTGCCC +
Preference number: 4 (lower is better)
Translates to: AKVADVLRMLWLVFPKGTGHKRV*YACPVP
Trigger: GGGCACTGGACAGGCATAGCAGACTCTCTTGTGGCC...AGTCCCTTTTGGAAATACAAGCCATAACATTCGAAGGACATCAGCGACCTTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp TGTTTGTTTCAGAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCACATCCAACAGGTAAATaGCTCACGACGGTGGTTTAT +
Preference number: 4 (lower is better)
Translates to: CLFQSGKHSMGVRGSSASHPTGK*LTTVVY
Trigger: ATAAACCACCGTCGTGAGGCATTTACCTGTTGGATG...TGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTCTGAAACAAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp TGCTGGCCTCTGAGACGAGCTGGTTTGTTTCCATCCCTGAAGCCTTTGGACGAGTCCCTGGATTCTTTCTaGACTACCAAAAACCCACCA +
Preference number: 4 (lower is better)
Translates to: CWPLRRAGLFPSLKPLDESLDSF*TTKNPP
Trigger: TGGTGGGTTTTTGGTAGTGCAGAAAGAATCCAGGGA...CTCGTCCAAAGGCTTCAGGGATGGAAACAAACCAGCTCGTCTCAGAGGCCAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp CAAAGACTTGCCCTAACCCATCTCACATGTAGGACTGACCCGGCCCCATTAAGAATGCAAGCTTCAGGTTaGAGCAGACGTGAGCAGCAA +
Preference number: 4 (lower is better)
Translates to: QRLALTHLTCRTDPAPLRMQASG*SRREQQ
Trigger: TTGCTGCTCACGTCTGCTGCAACCTGAAGCTTGCAT...TCTTAATGGGGCCGGGTCAGTCCTACATGTGAGATGGGTTAGGGCAAGTCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp CTGTTTGTTTCAGAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCCTTGAGGCAATTCTATaGACGATTGTGCAGATGAGA +
Preference number: 4 (lower is better)
Translates to: LFVSERQAQHGSQGVFSLLEAIL*TIVQMR
Trigger: TCTCATCTGCACAATCGTGCATAGAATTGCCTCAAG...GAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTCTGAAACAAACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp ACCAGTGAGTTGTGCTTGTTGAATTCTGCCCTCACTGCAGATGTGCAGGTCAAAAGGCAAGGCTCCAGCTaGGACAAGGACTCCATCTTC +
Preference number: 4 (lower is better)
Translates to: TSELCLLNSALTADVQVKRQGSS*DKDSIF
Trigger: GAAGATGGAGTCCTTGTCGCAGCTGGAGCCTTGCCT...TTTGACCTGCACATCTGCAGTGAGGGCAGAATTCAACAAGCACAACTCACTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp CAGAAACGGGCCCCTGTTCATACGGATAGGGGTTCTGGACTGTTGACTCTAGCCTGCTGCAATGGGAATTaGTTCTTCACCTCCAGGAAA +
Preference number: 4 (lower is better)
Translates to: QKRAPVHTDRGSGLLTLACCNGN*FFTSRK
Trigger: TTTCCTGGAGGTGAAGAAGCAATTCCCATTGCAGCA...GGCTAGAGTCAACAGTCCAGAACCCCTATCCGTATGAACAGGGGCCCGTTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp TGTTTGTTTCAGAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAAAGCGAATTGGTTTTTaGCCTCTGTCTGATTCTCGC +
Preference number: 4 (lower is better)
Translates to: CLFQSGKHSMGVRGSSASKRIGF*PLSDSR
Trigger: GCGAGAATCAGACAGAGGGCAAAAACCAATTCGCTT...TGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTCTGAAACAAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp CACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGGGGTCCCTGATGCGTaGTATCCATTCACTGTTGGA +
Preference number: 4 (lower is better)
Translates to: HKHVTVTPTKLGKDHKVPGVPDA*YPFTVG
Trigger: TCCAACAGTGAATGGATACCACGCATCAGGGACCCC...TGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000585266.5
CDS-3UTR CCA 90 bp ACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGATTTCGGACACTCATGTaGGCAGTCTCTGGAGGGTGC +
Preference number: 4 (lower is better)
Translates to: TPTKLGKDHKVPASVCFRFRTLM*AVSGGC
Trigger: GCACCCTCCAGAGACTGCCCACATGAGTGTCCGAAA...TCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000585266.5
CDS-3UTR CCA 90 bp TCCAGGGCACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAATCTGGGAATCACCGGTaGATTTTCGGACACTCATGT +
Preference number: 4 (lower is better)
Translates to: SRAQACDSDPYKTRQGPQSGNHR*IFGHSC
Trigger: ACATGAGTGTCCGAAAATCCACCGGTGATTCCCAGA...TTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTGCCCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000585266.5
CDS-3UTR CCA 90 bp CATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGAGGATCCCAGGTTCTaGGAATCACCGGTGGATTTT +
Preference number: 4 (lower is better)
Translates to: HVTVTPTKLGKDHKVPASEDPRF*ESPVDF
Trigger: AAAATCCACCGGTGATTCCCAGAACCTGGGATCCTC...AGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000585266.5
CDS-3UTR CCA 90 bp CAAAGACTTGCCCTAACCCATCTCACATGTAGGACTGACCCGGCCCCATTAAGAGAGGATCCCAGGTTCTaGGAATCACCGGTGGATTTT +
Preference number: 4 (lower is better)
Translates to: QRLALTHLTCRTDPAPLREDPRF*ESPVDF
Trigger: AAAATCCACCGGTGATTCCCAGAACCTGGGATCCTC...TCTTAATGGGGCCGGGTCAGTCCTACATGTGAGATGGGTTAGGGCAAGTCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR CCA 90 bp CCAAACAGCAGCACTGAAAGCTTCCCAAGTCACACTCAGACCAGACTTTTCCAGGTAGCTCCACTCGGTTaGTTTCAGCAGCTGCTGTTC +
Preference number: 4 (lower is better)
Translates to: PNSSTESFPSHTQTRLFQVAPLG*FQQLLF
Trigger: GAACAGCAGCTGCTGAAACCAACCGAGTGGAGCTAC...CTGGAAAAGTCTGGTCTGAGTGTGACTTGGGAAGCTTTCAGTGCTGCTGTTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR CCA 90 bp AGTGACAGAAAACTGTACAAGGGACAGCAGTCCCAGCCCTGCCATACACAAGAAGTAGCTCCACTCGGTTaGTTTCAGCAGCTGCTGTTC +
Preference number: 4 (lower is better)
Translates to: SDRKLYKGQQSQPCHTQEVAPLG*FQQLLF
Trigger: GAACAGCAGCTGCTGAAACCAACCGAGTGGAGCTAC...TTCTTGTGTATGGCAGGGCTGGGACTGCTGTCCCTTGTACAGTTTTCTGTCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp CATGATTCTGATCCTGACACCTGGCTTAGAGACAGAGCCCTCCCTACCCTGATCCCCTTCAGCTGTTTCTaGAGCAGTAGTTCAAACCCA +
Preference number: 4 (lower is better)
Translates to: HDSDPDTWLRDRALPTLIPFSCF*SSSSNP
Trigger: TGGGTTTGAACTACTGCTCCAGAAACAGCTGAAGGG...GATCAGGGTAGGGAGGGCTCTGTCTCTAAGCCAGGTGTCAGGATCAGAATCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp GACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGAGGTCGGCAATGTGGTaGTCGCACTTCTTCATGTCT +
Preference number: 4 (lower is better)
Translates to: DSDPYKTRQGPQSSSLCLRSAMW*SHFFMS
Trigger: AGACATGAAGAAGTGCGACCACCACATTGCCGACCT...CAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp GCACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGGTCGGCAATGTGGTaGTCGCACTTCTTCATGTCT +
Preference number: 4 (lower is better)
Translates to: AQACDSDPYKTRQGPQSSRSAMW*SHFFMS
Trigger: AGACATGAAGAAGTGCGACCACCACATTGCCGACCT...GGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp TGCTGGCCTCTGAGACGAGCTGGTTTGTTTCCATCCCTGAAGCCTTTGGACGAGTCTCTTCAAACCATTTaGACTGGGCCTGGTTGTAGA +
Preference number: 4 (lower is better)
Translates to: CWPLRRAGLFPSLKPLDESLQTI*TGPGCR
Trigger: TCTACAACCAGGCCCAGTCCAAATGGTTTGAAGAGA...CTCGTCCAAAGGCTTCAGGGATGGAAACAAACCAGCTCGTCTCAGAGGCCAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp CATGATTCTGATCCTGACACCTGGCTTAGAGACAGAGCCCTCCCTACCCTGATCCTAGCTCCAATGTGGTaGTCACCATCTCTTCAAACC +
Preference number: 4 (lower is better)
Translates to: HDSDPDTWLRDRALPTLILAPMW*SPSLQT
Trigger: GGTTTGAAGAGATGGTGACCACCACATTGGAGCTAG...GATCAGGGTAGGGAGGGCTCTGTCTCTAAGCCAGGTGTCAGGATCAGAATCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp ACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAACAGCTCCCTGTCTTTaGCCGGGTCCACTTTTCGAA +
Preference number: 4 (lower is better)
Translates to: TKLGKDHKVPASVCFRAATAPCL*PGPLFE
Trigger: TTCGAAAAGTGGACCCGGCCAAAGACAGGGAGCTGT...TGCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp GCATGCCTGGCTTGTCTTGAGCATTCGCTGAATGAATGCAGATTAATCAGAACATCTGTCTTCTGGGCCTaGGAATATGGGGGAGCCCCC +
Preference number: 4 (lower is better)
Translates to: ACLACLEHSLNECRLIRTSVFWA*EYGGAP
Trigger: GGGGGCTCCCCCATATTCCCAGGCCCAGAAGACAGA...TGTTCTGATTAATCTGCATTCATTCAGCGAATGCTCAAGACAAGCCAGGCATGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp GCCAAGGTCGCTGATGTCCTTCGAATGTTATGGCTTGTATTTCCAAAAGGGACTGATCCTCCAAAGCCCTaGAGACAAGGGAGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: AKVADVLRMLWLVFPKGTDPPKP*RQGSQL
Trigger: CAGCTGGCTCCCTTGTCTCCAGGGCTTTGGAGGATC...AGTCCCTTTTGGAAATACAAGCCATAACATTCGAAGGACATCAGCGACCTTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp ACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTCTGATCCTGACACCTaGCTTAGAGACAGAGCCCTC +
Preference number: 4 (lower is better)
Translates to: TVTPTKLGKDHKVPASVCSDPDT*LRDRAL
Trigger: GAGGGCTCTGTCTCTAAGCCAGGTGTCAGGATCAGA...ACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp CAGATGGCGCCTGATCTCATGGGACACGATTCAGCGCTCAATTTGGGGCTAATTAGGAGACTTTACAGATaGCGCCTGATCTCATGGGAC +
Preference number: 4 (lower is better)
Translates to: QMAPDLMGHDSALNLGLIRRLYR*RLISWD
Trigger: GTCCCATGAGATCAGGCGCCATCTGTAAAGTCTCCT...AATTAGCCCCAAATTGAGCGCTGAATCGTGTCCCATGAGATCAGGCGCCATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp ACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCACAGCTGGGGGAAGGATaGATTGGCATTTCCAGAGGA +
Preference number: 4 (lower is better)
Translates to: TKLGKDHKVPASVCFRAAQLGEG*IGISRG
Trigger: TCCTCTGGAAATGCCAATCCATCCTTCCCCCAGCTG...TGCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp CAGATGGCGCCTGATCTCATGGGACACGATTCAGCGCTCAATTTGGGGCTAATTGCCTCTGAGACGAGCTaGTTTGTTTCCATCCCTGAA +
Preference number: 4 (lower is better)
Translates to: QMAPDLMGHDSALNLGLIASETS*FVSIPE
Trigger: TTCAGGGATGGAAACAAACCAGCTCGTCTCAGAGGC...AATTAGCCCCAAATTGAGCGCTGAATCGTGTCCCATGAGATCAGGCGCCATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp TACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCGAAGACAGAGCCATCTaGGGGATGGCAAAGACTTGC +
Preference number: 4 (lower is better)
Translates to: YKTRQGPQSSSLCLFQSGEDRAI*GMAKTC
Trigger: GCAAGTCTTTGCCATCCCCCAGATGGCTCTGTCTTC...GCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp GTTGAATTCTGCCCTCACTGCAGATGTGCAGGTCAAACCCAAAGTGGTCAATGGGAAGACAGAGCCATCTaGGGGATGGCAAAGACTTGC +
Preference number: 4 (lower is better)
Translates to: VEFCPHCRCAGQTQSGQWEDRAI*GMAKTC
Trigger: GCAAGTCTTTGCCATCCCCCAGATGGCTCTGTCTTC...CCATTGACCACTTTGGGTTTGACCTGCACATCTGCAGTGAGGGCAGAATTCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR CCA 90 bp GCACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCCACCAAGTAAGGGTTTaGTGCAGGGCTCTGGAATGT +
Preference number: 4 (lower is better)
Translates to: AQACDSDPYKTRQGPQSSHQVRV*CRALEC
Trigger: ACATTCCAGAGCCCTGCACCAAACCCTTACTTGGTG...GGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp AGGGCACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTCACCAAGTAAGGGTTTaGTGCAGGGCTCTGGAATGT +
Preference number: 4 (lower is better)
Translates to: RAQACDSDPYKTRQGPQSHQVRV*CRALEC
Trigger: ACATTCCAGAGCCCTGCACCAAACCCTTACTTGGTG...ACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp TGCTGGCCTCTGAGACGAGCTGGTTTGTTTCCATCCCTGAAGCCTTTGGACGAGGACTTTTCCAGGGATTaGAAGATGGAGAGAGGGAAA +
Preference number: 4 (lower is better)
Translates to: CWPLRRAGLFPSLKPLDEDFSRD*KMERGK
Trigger: TTTCCCTCTCTCCATCTTCCAATCCCTGGAAAAGTC...CTCGTCCAAAGGCTTCAGGGATGGAAACAAACCAGCTCGTCTCAGAGGCCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR CCA 90 bp GATCCTGACACCTGGCTTAGAGACAGAGCCCTCCCTACCCTGATCCTCCAAAGCTTTAGACTGACATGGTaGAGAATGTGTTTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: DPDTWLRDRALPTLILQSFRLTW*RMCLLW
Trigger: CCACAGCAAACACATTCTCCACCATGTCAGTCTAAA...GCTTTGGAGGATCAGGGTAGGGAGGGCTCTGTCTCTAAGCCAGGTGTCAGGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR CCA 90 bp AGGGCACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTCAGATCTGGACAGAGTaGTTCTCCATCCCATGGACA +
Preference number: 4 (lower is better)
Translates to: RAQACDSDPYKTRQGPQSQIWTE*FSIPWT
Trigger: TGTCCATGGGATGGAGAACCACTCTGTCCAGATCTG...ACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR CCA 90 bp TACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCCCTCCAAAAATGGACTaGCCCAAACTGGGCCAACCT +
Preference number: 4 (lower is better)
Translates to: YKTRQGPQSSSLCLFQSGPPKMD*PKLGQP
Trigger: AGGTTGGCCCAGTTTGGGCCAGTCCATTTTTGGAGG...GCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp TGCTGGCCTCTGAGACGAGCTGGTTTGTTTCCATCCCTGAAGCCTTTGGACGAGTCTTCTCAGTCGACATaGAGAATAGAGGAGAGCAGA +
Preference number: 4 (lower is better)
Translates to: CWPLRRAGLFPSLKPLDESSQST*RIEESR
Trigger: TCTGCTCTCCTCTATTCTCCATGTCGACTGAGAAGA...CTCGTCCAAAGGCTTCAGGGATGGAAACAAACCAGCTCGTCTCAGAGGCCAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp TACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAGCCTGCCGAATAGTTaGGACTACAGGTGTGCACCA +
Preference number: 4 (lower is better)
Translates to: YKTRQGPQSSSLCLFQSGSLPNS*DYRCAP
Trigger: TGGTGCACACCTGTAGTCCCAACTATTCGGCAGGCT...GCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp AATTCTGCCCTCACTGCAGATGTGCAGGTCAAACCCAAAGTGGTCAATGGGAAATGTGCATCAGTCTCCTaGGTGGAGGCAGGTAGAAGG +
Preference number: 4 (lower is better)
Translates to: NSALTADVQVKPKVVNGKCASVS*VEAGRR
Trigger: CCTTCTACCTGCCTCCACCCAGGAGACTGATGCACA...TTTCCCATTGACCACTTTGGGTTTGACCTGCACATCTGCAGTGAGGGCAGAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp GCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAAGCACAGCATTTCCCCTCCCATCCCTaGATTCTTTCTGCACTACCA +
Preference number: 4 (lower is better)
Translates to: ARTTKFQPLFVSERQAQHFPSHP*ILSALP
Trigger: TGGTAGTGCAGAAAGAATCCAGGGATGGGAGGGGAA...ATGCTGTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp AAAATCTTGTTGCTGTCTACCTTCCATCCAACAGGTAAATGCCTCACGACGGTGGGGTCACACTCAGCCTaGTCTGGCCTTAACTGGGTG +
Preference number: 4 (lower is better)
Translates to: KILLLSTFHPTGKCLTTVGSHSA*SGLNWV
Trigger: CACCCAGTTAAGGCCAGACCAGGCTGAGTGTGACCC...CACCGTCGTGAGGCATTTACCTGTTGGATGGAAGGTAGACAGCAACAAGATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp GAAAACTGTACAAGGGACAGCAGTCCCAGCCCTGCCATACACAAGAAGACAGAGGCCCTAATCTTCACCTaGCCTGGATCCAGAAATGTC +
Preference number: 4 (lower is better)
Translates to: ENCTRDSSPSPAIHKKTEALIFT*PGSRNV
Trigger: GACATTTCTGGATCCAGGCCAGGTGAAGATTAGGGC...CTCTGTCTTCTTGTGTATGGCAGGGCTGGGACTGCTGTCCCTTGTACAGTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp CCGACTAGAATCTGCCCCTCGCTCATGCTTCTCCCGGCCCCTTTAGACTCTTTATCTAACCTGCTGCAATaGGAATTGCTTCTTCACCTC +
Preference number: 4 (lower is better)
Translates to: PTRICPSLMLLPAPLDSLSNLLQ*ELLLHL
Trigger: GAGGTGAAGAAGCAATTCCCATTGCAGCAGGTTAGA...TAAAGAGTCTAAAGGGGCCGGGAGAAGCATGAGCGAGGGGCAGATTCTAGTCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp CAGAAACGGGCCCCTGTTCATACGGATAGGGGTTCTGGACTGTTGACTCTAGCCCCAGCATTTAGAACGTaGGGAGAAGCGAATTGGTTT +
Preference number: 4 (lower is better)
Translates to: QKRAPVHTDRGSGLLTLAPAFRT*GEANWF
Trigger: AAACCAATTCGCTTCTCCCCACGTTCTAAATGCTGG...GGCTAGAGTCAACAGTCCAGAACCCCTATCCGTATGAACAGGGGCCCGTTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp GTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTGTCACTAAGGATGGCTaGCGTCCCTTTGAATGTCTG +
Preference number: 4 (lower is better)
Translates to: VTVTPTKLGKDHKVPASVVTKDG*RPFECL
Trigger: CAGACATTCAAAGGGACGCCAGCCATCCTTAGTGAC...AACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp AATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAATCACCAGAAGGTCACACCCATTTaGCATTTTTGCAAGAGTTTT +
Preference number: 4 (lower is better)
Translates to: NMGEPPARLSGSPFWNHQKVTPI*HFCKSF
Trigger: AAAACTCTTGCAAAAATGCCAAATGGGTGTGACCTT...CTGGTGATTCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000579158.5
3UTR CAA 72 bp CGGGCCCCTGTTCATACGGATAGGGGTTCTGGACTGTaGACTCTAGCCCTGGTCTTAATTCACTGGCAATTT +
Preference number: 4 (lower is better)
Translates to: RAPVHTDRGSGL*TLALVLIHWQF
Trigger: AAATTGCCAGTGAATTAAGACCAGGGCTAGAGTCAACAGTCCAGAACCCCTATCCGTATGAACAGGGGCCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp GCCAAGGTCGCTGATGTCCTTCGAATGTTATGGCTTGTATTTCCAAAAGGGACTGCAGAGAACTTGAGGTaGACTTCTGCTTCGTCCGCC +
Preference number: 4 (lower is better)
Translates to: AKVADVLRMLWLVFPKGTAENLR*TSASSA
Trigger: GGCGGACGAAGCAGAAGTTCACCTCAAGTTCTCTGC...AGTCCCTTTTGGAAATACAAGCCATAACATTCGAAGGACATCAGCGACCTTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp CCAAACAGCAGCACTGAAAGCTTCCCAAGTCACACTCAGACCAGACTTTTCCAGGCTTGGCAGAGAACTTaGGGTGAACTTCTGCTTCGT +
Preference number: 4 (lower is better)
Translates to: PNSSTESFPSHTQTRLFQAWQRT*GELLLR
Trigger: ACGAAGCAGAAGTTCACCTCAAGTTCTCTGCCAAGC...CTGGAAAAGTCTGGTCTGAGTGTGACTTGGGAAGCTTTCAGTGCTGCTGTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR TCA 90 bp ACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAGCTTGGCAGAGAACTTaGGGTGAACTTCTGCTTCGT +
Preference number: 4 (lower is better)
Translates to: TKLGKDHKVPASVCFRAAAWQRT*GELLLR
Trigger: ACGAAGCAGAAGTTCACCTCAAGTTCTCTGCCAAGC...TGCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR TCA 90 bp ACCCCACTTAACATTAGAAGTGCTCTCTCCGACCTACACAAGGAATGCATCTTGACTTTTCGAAGCAGCTaGTCCACGGGCTCGACTGTG +
Preference number: 4 (lower is better)
Translates to: TPLNIRSALSDLHKECILTFRSS*STGSTV
Trigger: CACAGTCGAGCCCGTGGATCAGCTGCTTCGAAAAGT...CAAGATGCATTCCTTGTGTAGGTCGGAGAGAGCACTTCTAATGTTAAGTGGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp AGTGACAGAAAACTGTACAAGGGACAGCAGTCCCAGCCCTGCCATACACAAGAAACTCTATCCCAGGGATaGACAGAGGACTCTGGAATC +
Preference number: 4 (lower is better)
Translates to: SDRKLYKGQQSQPCHTQETLSQG*TEDSGI
Trigger: GATTCCAGAGTCCTCTGTTCATCCCTGGGATAGAGT...TTCTTGTGTATGGCAGGGCTGGGACTGCTGTCCCTTGTACAGTTTTCTGTCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp GGATCCAGAAATGTCTCTGGTTCGCATAGAGAGGTACCCAACTGGTCTCGGGACTCAAAAGCATTAAGCTaGGGGAAAGATGCCAGACTC +
Preference number: 4 (lower is better)
Translates to: GSRNVSGSHREVPNWSRDSKALS*GKDARL
Trigger: GAGTCTGGCATCTTTCCCTCAGCTTAATGCTTTTGA...GTCCCGAGACCAGTTGGGTACCTCTCTATGCGAACCAGAGACATTTCTGGATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp TGCTGGCCTCTGAGACGAGCTGGTTTGTTTCCATCCCTGAAGCCTTTGGACGAGCGCACACATCATGAATaGCTCAAAAGCATTAAGCTG +
Preference number: 4 (lower is better)
Translates to: CWPLRRAGLFPSLKPLDERTHHE*LKSIKL
Trigger: CAGCTTAATGCTTTTGAGTCATTCATGATGTGTGCG...CTCGTCCAAAGGCTTCAGGGATGGAAACAAACCAGCTCGTCTCAGAGGCCAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp AATTCTGCCCTCACTGCAGATGTGCAGGTCAAACCCAAAGTGGTCAATGGGAAAGAGCCAGACACAGCATaGACACGTGTACAGGGTACA +
Preference number: 4 (lower is better)
Translates to: NSALTADVQVKPKVVNGKEPDTA*TRVQGT
Trigger: TGTACCCTGTACACGTGTTCATGCTGTGTCTGGCTC...TTTCCCATTGACCACTTTGGGTTTGACCTGCACATCTGCAGTGAGGGCAGAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp GAAAACTGTACAAGGGACAGCAGTCCCAGCCCTGCCATACACAAGAAGACAGAGTCTCTCACCAGGACTTaGGGCAATTCTATGCACGAT +
Preference number: 4 (lower is better)
Translates to: ENCTRDSSPSPAIHKKTESLTRT*GNSMHD
Trigger: ATCGTGCATAGAATTGCCTCAAGTCCTGGTGAGAGA...CTCTGTCTTCTTGTGTATGGCAGGGCTGGGACTGCTGTCCCTTGTACAGTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp AATTCTGCCCTCACTGCAGATGTGCAGGTCAAACCCAAAGTGGTCAATGGGAAAACCAAGGAACAGTCCTaGACACCACACGCAATCTCC +
Preference number: 4 (lower is better)
Translates to: NSALTADVQVKPKVVNGKTKEQS*TPHAIS
Trigger: GGAGATTGCGTGTGGTGTTCAGGACTGTTCCTTGGT...TTTCCCATTGACCACTTTGGGTTTGACCTGCACATCTGCAGTGAGGGCAGAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp AAAATCTTGTTGCTGTCTACCTTCCATCCAACAGGTAAATGCCTCACGACGGTGATGTGCTCGTGTCTGTaGAGGGGTTGCTTCCGGTCA +
Preference number: 4 (lower is better)
Translates to: KILLLSTFHPTGKCLTTVMCSCL*RGCFRS
Trigger: TGACCGGAAGCAACCCCTTCACAGACACGAGCACAT...CACCGTCGTGAGGCATTTACCTGTTGGATGGAAGGTAGACAGCAACAAGATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp CTGTTTGTTTCAGAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCATCAATTTTATTTACTaGTCTAGGCAGCCAGAGGGT +
Preference number: 4 (lower is better)
Translates to: LFVSERQAQHGSQGVFSLINFIY*SRQPEG
Trigger: ACCCTCTGGCTGCCTAGATCAGTAAATAAAATTGAT...GAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTCTGAAACAAACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp ACCAGTGAGTTGTGCTTGTTGAATTCTGCCCTCACTGCAGATGTGCAGGTCAAACTTATCCTAAAGCCGTaGGCAAACGCTACTCGCTGG +
Preference number: 4 (lower is better)
Translates to: TSELCLLNSALTADVQVKLILKP*ANATRW
Trigger: CCAGCGAGTAGCGTTTGCTCACGGCTTTAGGATAAG...TTTGACCTGCACATCTGCAGTGAGGGCAGAATTCAACAAGCACAACTCACTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437099.6
CDS-3UTR GCA 90 bp ACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTCCTTGCTCTGCTTTTTaGTTGGCGATGAGGATCCCA +
Preference number: 4 (lower is better)
Translates to: TVTPTKLGKDHKVPASVCPCSAF*LAMRIP
Trigger: TGGGATCCTCATCGCCAAGCAAAAAGCAGAGCAAGG...ACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000583882.5
ENST00000585266.5
CDS-3UTR GCA 90 bp TACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAACATGTCTGTTTCATaGCGCAGCTGCGTGTACTGG +
Preference number: 4 (lower is better)
Translates to: YKTRQGPQSSSLCLFQSGNMSVS*RSCVYW
Trigger: CCAGTACACGCAGCTGCGGCATGAAACAGACATGTT...GCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp ACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCACAAGTAAGGGTTTGGTaGAGGGCTCTGGAATGTCCA +
Preference number: 4 (lower is better)
Translates to: TKLGKDHKVPASVCFRAAQVRVW*RALECP
Trigger: TGGACATTCCAGAGCCCTGCACCAAACCCTTACTTG...TGCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp CACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGAATTCTGCCCTCACTaGAGATGTGCAGGTCAAACC +
Preference number: 4 (lower is better)
Translates to: HKHVTVTPTKLGKDHKVPEFCPH*RCAGQT
Trigger: GGTTTGACCTGCACATCTGCAGTGAGGGCAGAATTC...TGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR GCA 90 bp AAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAAGCACAGCATGGGAGTCAGGGAAGACCAGTGAGTTGTaGTTGTTGAATTCTGCCCTC +
Preference number: 4 (lower is better)
Translates to: KVPASVCFRAASTAWESGKTSEL*LLNSAL
Trigger: GAGGGCAGAATTCAACAAGCACAACTCACTGGTCTT...CCCTGACTCCCATGCTGTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR GCA 90 bp GGAAGAGCCTTGGGGCTTCCAGGGCACAAGCATGTGACAGTGACCCCTACAAAAAGGAGAGCAGAGGAATaGCCATCTTACATACAACTA +
Preference number: 4 (lower is better)
Translates to: GRALGLPGHKHVTVTPTKRRAEE*PSYIQL
Trigger: TAGTTGTATGTAAGATGGGCATTCCTCTGCTCTCCT...TTTTGTAGGGGTCACTGTCACATGCTTGTGCCCTGGAAGCCCCAAGGCTCTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp CAGATGGCGCCTGATCTCATGGGACACGATTCAGCGCTCAATTTGGGGCTAATTCACAAACAGATCTTGTaGATCAGTCTCCTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: QMAPDLMGHDSALNLGLIHKQIL*ISLLGG
Trigger: TCCACCCAGGAGACTGATGCACAAGATCTGTTTGTG...AATTAGCCCCAAATTGAGCGCTGAATCGTGTCCCATGAGATCAGGCGCCATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp GCACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGAGTAGTACGCCCATaGAATGAAATACTTCCCGGC +
Preference number: 4 (lower is better)
Translates to: AQACDSDPYKTRQGPQSSRVVRP*NEILPG
Trigger: GCCGGGAAGTATTTCATTGCATGGGCGTACTACTCT...GGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp GCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAAGCACAGCATAGAGTAGTACGCCCATaGAATGAAATACTTCCCGGC +
Preference number: 4 (lower is better)
Translates to: ARTTKFQPLFVSERQAQHRVVRP*NEILPG
Trigger: GCCGGGAAGTATTTCATTGCATGGGCGTACTACTCT...ATGCTGTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp ACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTATGCAAGCTTCAGGTTaGAGCAGACGTGAGCAGCAA +
Preference number: 4 (lower is better)
Translates to: TVTPTKLGKDHKVPASVCMQASG*SRREQQ
Trigger: TTGCTGCTCACGTCTGCTGCAACCTGAAGCTTGCAT...ACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp TCCAGAAATGTCTCTGGTTCGCATAGAGAGGTACCCAACTGGTCTCGGGACTCACCTTCTTGTCCATGCTaGTTCTGCTCGCCTTTCAAA +
Preference number: 4 (lower is better)
Translates to: SRNVSGSHREVPNWSRDSPSCPC*FCSPFK
Trigger: TTTGAAAGGCGAGCAGAAGCAGCATGGACAAGAAGG...TGAGTCCCGAGACCAGTTGGGTACCTCTCTATGCGAACCAGAGACATTTCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp TTTGTTTCAGAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGACTTGAGGCAATTCTATaGACGATTGTGCAGATGAGA +
Preference number: 4 (lower is better)
Translates to: FVSERQAQHGSQGVFSLRLEAIL*TIVQMR
Trigger: TCTCATCTGCACAATCGTGCATAGAATTGCCTCAAG...TCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTCTGAAACAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp TACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCGAGGATCCCAGGTTCTaGGAATCACCGGTGGATTTT +
Preference number: 4 (lower is better)
Translates to: YKTRQGPQSSSLCLFQSGEDPRF*ESPVDF
Trigger: AAAATCCACCGGTGATTCCCAGAACCTGGGATCCTC...GCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000585266.5
CDS-3UTR CCA 90 bp GCCAAGGTCGCTGATGTCCTTCGAATGTTATGGCTTGTATTTCCAAAAGGGACTTTCCGGCATCGTGTCTaGGTGAGGGAACGTCACACA +
Preference number: 4 (lower is better)
Translates to: AKVADVLRMLWLVFPKGTFRHRV*VRERHT
Trigger: TGTGTGACGTTCCCTCACCCAGACACGATGCCGGAA...AGTCCCTTTTGGAAATACAAGCCATAACATTCGAAGGACATCAGCGACCTTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp ACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGTAGCTCCACTCGGTTaGTTTCAGCAGCTGCTGTTC +
Preference number: 4 (lower is better)
Translates to: TPTKLGKDHKVPASVCFRVAPLG*FQQLLF
Trigger: GAACAGCAGCTGCTGAAACCAACCGAGTGGAGCTAC...TCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp GACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGCCCTTCAGCTGTTTCTaGAGCAGTAGTTCAAACCCA +
Preference number: 4 (lower is better)
Translates to: DSDPYKTRQGPQSSSLCLPFSCF*SSSSNP
Trigger: TGGGTTTGAACTACTGCTCCAGAAACAGCTGAAGGG...CAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp AGTGACAGAAAACTGTACAAGGGACAGCAGTCCCAGCCCTGCCATACACAAGAAAGGTCGGCAATGTGGTaGTCGCACTTCTTCATGTCT +
Preference number: 4 (lower is better)
Translates to: SDRKLYKGQQSQPCHTQERSAMW*SHFFMS
Trigger: AGACATGAAGAAGTGCGACCACCACATTGCCGACCT...TTCTTGTGTATGGCAGGGCTGGGACTGCTGTCCCTTGTACAGTTTTCTGTCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp CAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTAGCTCCAATGTGGTaGTCACCATCTCTTCAAACC +
Preference number: 4 (lower is better)
Translates to: QACDSDPYKTRQGPQSSSLAPMW*SPSLQT
Trigger: GGTTTGAAGAGATGGTGACCACCACATTGGAGCTAG...GCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp GCACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCCTAGCTCCAATGTGGTaGTCACCATCTCTTCAAACC +
Preference number: 4 (lower is better)
Translates to: AQACDSDPYKTRQGPQSSLAPMW*SPSLQT
Trigger: GGTTTGAAGAGATGGTGACCACCACATTGGAGCTAG...GGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp GTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTGCTCTAGCTCCAATGTaGTGGTCACCATCTCTTCAA +
Preference number: 4 (lower is better)
Translates to: VTVTPTKLGKDHKVPASVALAPM*WSPSLQ
Trigger: TTGAAGAGATGGTGACCACCACATTGGAGCTAGAGC...AACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp CTGAGACGAGCTGGTTTGTTTCCATCCCTGAAGCCTTTGGACGAGCTGGATGAGGGCTCGACTGTGCTTTaGTTGAACATGTCTGTTTCA +
Preference number: 4 (lower is better)
Translates to: LRRAGLFPSLKPLDELDEGSTVL*LNMSVS
Trigger: TGAAACAGACATGTTCAACCAAAGCACAGTCGAGCC...CTCATCCAGCTCGTCCAAAGGCTTCAGGGATGGAAACAAACCAGCTCGTCTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp GCCAAGGTCGCTGATGTCCTTCGAATGTTATGGCTTGTATTTCCAAAAGGGACTTTTGGTGCAGGGCTCTaGAATGTCCAGAAGGAGCGG +
Preference number: 4 (lower is better)
Translates to: AKVADVLRMLWLVFPKGTFGAGL*NVQKER
Trigger: CCGCTCCTTCTGGACATTCCAGAGCCCTGCACCAAA...AGTCCCTTTTGGAAATACAAGCCATAACATTCGAAGGACATCAGCGACCTTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp TTTGTTTCAGAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGATTTAGACTGACATGGTaGAGAATGTGTTTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: FVSERQAQHGSQGVFSLRFRLTW*RMCLLW
Trigger: CCACAGCAAACACATTCTCCACCATGTCAGTCTAAA...TCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTCTGAAACAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR CCA 90 bp ACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAACCCAACCCCAGATCTaGACAGAGTGGTTCTCCATC +
Preference number: 4 (lower is better)
Translates to: TPTKLGKDHKVPASVCFRTQPQI*TEWFSI
Trigger: GATGGAGAACCACTCTGTCCAGATCTGGGGTTGGGT...TCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR CCA 90 bp GCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTCTTCTCAGTCGACATaGAGAATAGAGGAGAGCAGA +
Preference number: 4 (lower is better)
Translates to: ACDSDPYKTRQGPQSSSLSSQST*RIEESR
Trigger: TCTGCTCTCCTCTATTCTCCATGTCGACTGAGAAGA...GAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp TACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCACAAGTGGCTCTTCCTaGAGGTTGTCACAGCAACCA +
Preference number: 4 (lower is better)
Translates to: YKTRQGPQSSSLCLFQSGTSGSS*RLSQQP
Trigger: TGGTTGCTGTGACAACCTCCAGGAAGAGCCACTTGT...GCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp CTGAGACGAGCTGGTTTGTTTCCATCCCTGAAGCCTTTGGACGAGCTGGATGAGAGGGAAAGAAACCCCTaGTTGGTGAATTCGTTGGTA +
Preference number: 4 (lower is better)
Translates to: LRRAGLFPSLKPLDELDERERNP*LVNSLV
Trigger: TACCAACGAATTCACCAACCAGGGGTTTCTTTCCCT...CTCATCCAGCTCGTCCAAAGGCTTCAGGGATGGAAACAAACCAGCTCGTCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp CAGATGGCGCCTGATCTCATGGGACACGATTCAGCGCTCAATTTGGGGCTAATTGCAGCAAGCTGGAAGTaGTCGTGCAAACAAGTTGAA +
Preference number: 4 (lower is better)
Translates to: QMAPDLMGHDSALNLGLIAASWK*SCKQVE
Trigger: TTCAACTTGTTTGCACGACCACTTCCAGCTTGCTGC...AATTAGCCCCAAATTGAGCGCTGAATCGTGTCCCATGAGATCAGGCGCCATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp CATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGCAGCAAGCTGGAAGTaGTCGTGCAAACAAGTTGAA +
Preference number: 4 (lower is better)
Translates to: HVTVTPTKLGKDHKVPASAASWK*SCKQVE
Trigger: TTCAACTTGTTTGCACGACCACTTCCAGCTTGCTGC...AGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp GTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTAAGGAAGCAGCAAGCTaGAAGTGGTCGTGCAAACAA +
Preference number: 4 (lower is better)
Translates to: VTVTPTKLGKDHKVPASVKEAAS*KWSCKQ
Trigger: TTGTTTGCACGACCACTTCCAGCTTGCTGCTTCCTT...AACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp CCAAACAGCAGCACTGAAAGCTTCCCAAGTCACACTCAGACCAGACTTTTCCAGTTCCCCTCCCATCCCTaGATTCTTTCTGCACTACCA +
Preference number: 4 (lower is better)
Translates to: PNSSTESFPSHTQTRLFQFPSHP*ILSALP
Trigger: TGGTAGTGCAGAAAGAATCCAGGGATGGGAGGGGAA...CTGGAAAAGTCTGGTCTGAGTGTGACTTGGGAAGCTTTCAGTGCTGCTGTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp TGGGGGAAGGATGGATTGGCATTTCCAGAGGAGACTTTACAGATGGCGCCTGATTACTTGCACTGTCTTTaGGGGGTCCTAGGAGAAACT +
Preference number: 4 (lower is better)
Translates to: WGKDGLAFPEETLQMAPDYLHCL*GVLGET
Trigger: AGTTTCTCCTAGGACCCCCCAAAGACAGTGCAAGTA...ATCAGGCGCCATCTGTAAAGTCTCCTCTGGAAATGCCAATCCATCCTTCCCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp GCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTCTAACCTGCTGCAATaGGAATTGCTTCTTCACCTC +
Preference number: 4 (lower is better)
Translates to: ACDSDPYKTRQGPQSSSLSNLLQ*ELLLHL
Trigger: GAGGTGAAGAAGCAATTCCCATTGCAGCAGGTTAGA...GAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp AGTAAGGGTTTGGTGCAGGGCTCTGGAATGTCCAGAAGGAGCGGGAAGCAAAGGTCACACAGTTTATTGTaGTGGTGTTTTCCTTGCTCT +
Preference number: 4 (lower is better)
Translates to: SKGLVQGSGMSRRSGKQRSHSLL*WCFPCS
Trigger: AGAGCAAGGAAAACACCATCACAATAAACTGTGTGA...CCTTTGCTTCCCGCTCCTTCTGGACATTCCAGAGCCCTGCACCAAACCCTTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR TCA 90 bp TTTGTTTCAGAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGATCACACAGTTTATTGTaGTGGTGTTTTCCTTGCTCT +
Preference number: 4 (lower is better)
Translates to: FVSERQAQHGSQGVFSLRSHSLL*WCFPCS
Trigger: AGAGCAAGGAAAACACCATCACAATAAACTGTGTGA...TCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTCTGAAACAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR TCA 90 bp CCGACTAGAATCTGCCCCTCGCTCATGCTTCTCCCGGCCCCTTTAGACTCTTTATCACACAGTTTATTGTaGTGGTGTTTTCCTTGCTCT +
Preference number: 4 (lower is better)
Translates to: PTRICPSLMLLPAPLDSLSHSLL*WCFPCS
Trigger: AGAGCAAGGAAAACACCATCACAATAAACTGTGTGA...TAAAGAGTCTAAAGGGGCCGGGAGAAGCATGAGCGAGGGGCAGATTCTAGTCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR TCA 90 bp ACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGTGATGAACAGTGGCTaGGAAAGCCAGATGTGGACT +
Preference number: 4 (lower is better)
Translates to: TPTKLGKDHKVPASVCFRVMNSG*ESQMWT
Trigger: AGTCCACATCTGGCTTTCTCAGCCACTGTTCATCAC...TCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR TCA 90 bp ACCAGTGAGTTGTGCTTGTTGAATTCTGCCCTCACTGCAGATGTGCAGGTCAAAGTGAGTTGTGCTTGTTaGATTCTGCCCTCACTGCAG +
Preference number: 4 (lower is better)
Translates to: TSELCLLNSALTADVQVKVSCAC*ILPSLQ
Trigger: CTGCAGTGAGGGCAGAATTCAACAAGCACAACTCAC...TTTGACCTGCACATCTGCAGTGAGGGCAGAATTCAACAAGCACAACTCACTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR TCA 90 bp AGTAAGGGTTTGGTGCAGGGCTCTGGAATGTCCAGAAGGAGCGGGAAGCAAAGGCAAGGCTATTGGCTTTaGATGTTTGGAAATCATCCA +
Preference number: 4 (lower is better)
Translates to: SKGLVQGSGMSRRSGKQRQGYWL*MFGNHP
Trigger: TGGATGATTTCCAAACATTCAAAGCCAATAGCCTTG...CCTTTGCTTCCCGCTCCTTCTGGACATTCCAGAGCCCTGCACCAAACCCTTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR TCA 90 bp CAGATGGCGCCTGATCTCATGGGACACGATTCAGCGCTCAATTTGGGGCTAATTCCTATGTGTTGCCACTaGCTGAAAGCACTAGAAAGA +
Preference number: 4 (lower is better)
Translates to: QMAPDLMGHDSALNLGLIPMCCH*LKALER
Trigger: TCTTTCTAGTGCTTTCAGTCAGTGGCAACACATAGG...AATTAGCCCCAAATTGAGCGCTGAATCGTGTCCCATGAGATCAGGCGCCATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp CCGACTAGAATCTGCCCCTCGCTCATGCTTCTCCCGGCCCCTTTAGACTCTTTAACAAGGAATGCATCTTaGGCCTTCTGTTTAAACACT +
Preference number: 4 (lower is better)
Translates to: PTRICPSLMLLPAPLDSLTRNAS*AFCLNT
Trigger: AGTGTTTAAACAGAAGGCTCAAGATGCATTCCTTGT...TAAAGAGTCTAAAGGGGCCGGGAGAAGCATGAGCGAGGGGCAGATTCTAGTCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp GACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTCAAAAGCATTAAGCTaGGGGAAAGATGCCAGACTC +
Preference number: 4 (lower is better)
Translates to: DSDPYKTRQGPQSSSLCLSKALS*GKDARL
Trigger: GAGTCTGGCATCTTTCCCTCAGCTTAATGCTTTTGA...CAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp GCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCCGCACACATCATGAATaGCTCAAAAGCATTAAGCTG +
Preference number: 4 (lower is better)
Translates to: ACDSDPYKTRQGPQSSSLRTHHE*LKSIKL
Trigger: CAGCTTAATGCTTTTGAGTCATTCATGATGTGTGCG...GAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp CTGAGACGAGCTGGTTTGTTTCCATCCCTGAAGCCTTTGGACGAGCTGGATGAGTCAAAGATCGACGAATaGGATCCAAACGGTCATTAC +
Preference number: 4 (lower is better)
Translates to: LRRAGLFPSLKPLDELDESKIDE*DPNGHY
Trigger: GTAATGACCGTTTGGATCTCATTCGTCGATCTTTGA...CTCATCCAGCTCGTCCAAAGGCTTCAGGGATGGAAACAAACCAGCTCGTCTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp GCATGCCTGGCTTGTCTTGAGCATTCGCTGAATGAATGCAGATTAATCAGAACAATGTGCTCGTGTCTGTaGAGGGGTTGCTTCCGGTCA +
Preference number: 4 (lower is better)
Translates to: ACLACLEHSLNECRLIRTMCSCL*RGCFRS
Trigger: TGACCGGAAGCAACCCCTTCACAGACACGAGCACAT...TGTTCTGATTAATCTGCATTCATTCAGCGAATGCTCAAGACAAGCCAGGCATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp CATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTCAGGGATGCTCAGTCTaGATCCTAAGTCACCATATT +
Preference number: 4 (lower is better)
Translates to: HVTVTPTKLGKDHKVPASQGCSV*ILSHHI
Trigger: AATATGGTGACTTAGGATTCAGACTGAGCATCCCTG...AGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000580865.5
ENST00000583882.5
CDS-3UTR GCA 90 bp ACCAGTGAGTTGTGCTTGTTGAATTCTGCCCTCACTGCAGATGTGCAGGTCAAACCTTGCTCTGCTTTTTaGTTGGCGATGAGGATCCCA +
Preference number: 4 (lower is better)
Translates to: TSELCLLNSALTADVQVKPCSAF*LAMRIP
Trigger: TGGGATCCTCATCGCCAAGCAAAAAGCAGAGCAAGG...TTTGACCTGCACATCTGCAGTGAGGGCAGAATTCAACAAGCACAACTCACTGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR GCA 90 bp AGGGCACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTGTGTTTTCCTTGCTCTaGTTTTTGCTTGGCGATGAG +
Preference number: 4 (lower is better)
Translates to: RAQACDSDPYKTRQGPQSVFSLL*FLLGDE
Trigger: CTCATCGCCAAGCAAAAAGCAGAGCAAGGAAAACAC...ACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTGCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000583882.5
ENST00000585266.5
CDS-3UTR GCA 90 bp GACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGCCTTCTGCATTTGTTTaGCCTTCAGCTGTTTCTGGA +
Preference number: 4 (lower is better)
Translates to: DSDPYKTRQGPQSSSLCLPSAFV*PSAVSG
Trigger: TCCAGAAACAGCTGAAGGGCAAACAAATGCAGAAGG...CAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp ACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAAGCACAGCATGGGAGTCCTTCTGCATTTGTTTaGCCTTCAGCTGTTTCTGGA +
Preference number: 4 (lower is better)
Translates to: TTKFQPLFVSERQAQHGSPSAFV*PSAVSG
Trigger: TCCAGAAACAGCTGAAGGGCAAACAAATGCAGAAGG...ACTCCCATGCTGTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp GCATGCCTGGCTTGTCTTGAGCATTCGCTGAATGAATGCAGATTAATCAGAACAATCTCCAGGTCTCTCTaGCGCTCTGTGAGGGCTTTC +
Preference number: 4 (lower is better)
Translates to: ACLACLEHSLNECRLIRTISRSL*RSVRAF
Trigger: GAAAGCCCTCACAGAGCGGCAGAGAGACCTGGAGAT...TGTTCTGATTAATCTGCATTCATTCAGCGAATGCTCAAGACAAGCCAGGCATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp GCATGCCTGGCTTGTCTTGAGCATTCGCTGAATGAATGCAGATTAATCAGAACATACTGGCACAGGTGCTaGCGGATCATCTCTACCCTC +
Preference number: 4 (lower is better)
Translates to: ACLACLEHSLNECRLIRTYWHRC*RIISTL
Trigger: GAGGGTAGAGATGATCCGGCAGCACCTGTGCCAGTA...TGTTCTGATTAATCTGCATTCATTCAGCGAATGCTCAAGACAAGCCAGGCATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp ACCAGTGAGTTGTGCTTGTTGAATTCTGCCCTCACTGCAGATGTGCAGGTCAAACAAGTAAGGGTTTGGTaGAGGGCTCTGGAATGTCCA +
Preference number: 4 (lower is better)
Translates to: TSELCLLNSALTADVQVKQVRVW*RALECP
Trigger: TGGACATTCCAGAGCCCTGCACCAAACCCTTACTTG...TTTGACCTGCACATCTGCAGTGAGGGCAGAATTCAACAAGCACAACTCACTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR GCA 90 bp CACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGTGCTTGTTGAATTCTaGCCTCACTGCAGATGTGCA +
Preference number: 4 (lower is better)
Translates to: HKHVTVTPTKLGKDHKVPVLVEF*PHCRCA
Trigger: TGCACATCTGCAGTGAGGGCAGAATTCAACAAGCAC...TGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR GCA 90 bp GCATGCCTGGCTTGTCTTGAGCATTCGCTGAATGAATGCAGATTAATCAGAACACGCCGCTTCTCAGCATaGCTGGCTTGTCTTGAGCAT +
Preference number: 4 (lower is better)
Translates to: ACLACLEHSLNECRLIRTRRFSA*LACLEH
Trigger: ATGCTCAAGACAAGCCAGGCATGCTGAGAAGCGGCG...TGTTCTGATTAATCTGCATTCATTCAGCGAATGCTCAAGACAAGCCAGGCATGC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp GCACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCCATCCAACAGGTAAATaGCTCACGACGGTGGTTTAT +
Preference number: 4 (lower is better)
Translates to: AQACDSDPYKTRQGPQSSHPTGK*LTTVVY
Trigger: ATAAACCACCGTCGTGAGGCATTTACCTGTTGGATG...GGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp TACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAGCTGGAAGTGGTCGTaGAAACAAGTTGAAGACCCT +
Preference number: 4 (lower is better)
Translates to: YKTRQGPQSSSLCLFQSGSWKWS*KQVEDP
Trigger: AGGGTCTTCAACTTGTTTGCACGACCACTTCCAGCT...GCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp TGGGGGAAGGATGGATTGGCATTTCCAGAGGAGACTTTACAGATGGCGCCTGATTCCCTGGATTCTTTCTaGACTACCAAAAACCCACCA +
Preference number: 4 (lower is better)
Translates to: WGKDGLAFPEETLQMAPDSLDSF*TTKNPP
Trigger: TGGTGGGTTTTTGGTAGTGCAGAAAGAATCCAGGGA...ATCAGGCGCCATCTGTAAAGTCTCCTCTGGAAATGCCAATCCATCCTTCCCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp AATTCTGCCCTCACTGCAGATGTGCAGGTCAAACCCAAAGTGGTCAATGGGAAAAGAAGGGAGCAGATCTaGTGGCTGAGATGCAAGCTT +
Preference number: 4 (lower is better)
Translates to: NSALTADVQVKPKVVNGKRREQI*WLRCKL
Trigger: AAGCTTGCATCTCAGCCAGCAGATCTGCTCCCTTCT...TTTCCCATTGACCACTTTGGGTTTGACCTGCACATCTGCAGTGAGGGCAGAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp TACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCCCTTCTTGTCCATGCTaGTTCTGCTCGCCTTTCAAA +
Preference number: 4 (lower is better)
Translates to: YKTRQGPQSSSLCLFQSGPSCPC*FCSPFK
Trigger: TTTGAAAGGCGAGCAGAAGCAGCATGGACAAGAAGG...GCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp AAAATCTTGTTGCTGTCTACCTTCCATCCAACAGGTAAATGCCTCACGACGGTGCAGCCTTCTTGTCCATaGTGCTTCTGCTCGCCTTTC +
Preference number: 4 (lower is better)
Translates to: KILLLSTFHPTGKCLTTVQPSCP*CFCSPF
Trigger: GAAAGGCGAGCAGAAGCAGCATGGACAAGAAGGCTG...CACCGTCGTGAGGCATTTACCTGTTGGATGGAAGGTAGACAGCAACAAGATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp CAGATGGCGCCTGATCTCATGGGACACGATTCAGCGCTCAATTTGGGGCTAATTATTCTCGCTCTAACCTaGTGCAATGGGAATTGCTTC +
Preference number: 4 (lower is better)
Translates to: QMAPDLMGHDSALNLGLIILALT*CNGNCF
Trigger: GAAGCAATTCCCATTGCAGCAGGTTAGAGCGAGAAT...AATTAGCCCCAAATTGAGCGCTGAATCGTGTCCCATGAGATCAGGCGCCATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp CAAAGACTTGCCCTAACCCATCTCACATGTAGGACTGACCCGGCCCCATTAAGAAAGCGAATTGGTTTTTaGCCTCTGTCTGATTCTCGC +
Preference number: 4 (lower is better)
Translates to: QRLALTHLTCRTDPAPLRKRIGF*PLSDSR
Trigger: GCGAGAATCAGACAGAGGGCAAAAACCAATTCGCTT...TCTTAATGGGGCCGGGTCAGTCCTACATGTGAGATGGGTTAGGGCAAGTCTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp CCAAACAGCAGCACTGAAAGCTTCCCAAGTCACACTCAGACCAGACTTTTCCAGCACTTTCATAGGGTTTaGCGATGTGCTCGTGTCTGT +
Preference number: 4 (lower is better)
Translates to: PNSSTESFPSHTQTRLFQHFHRV*RCARVC
Trigger: ACAGACACGAGCACATCGGCAAACCCTATGAAAGTG...CTGGAAAAGTCTGGTCTGAGTGTGACTTGGGAAGCTTTCAGTGCTGCTGTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp GCACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCATTAATACACACAAATaGGGTAACAGGGGTCAGGGG +
Preference number: 4 (lower is better)
Translates to: AQACDSDPYKTRQGPQSSINTHK*GNRGQG
Trigger: CCCCTGACCCCTGTTACCGCATTTGTGTGTATTAAT...GGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp AGGGCACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTATTAATACACACAAATaGGGTAACAGGGGTCAGGGG +
Preference number: 4 (lower is better)
Translates to: RAQACDSDPYKTRQGPQSINTHK*GNRGQG
Trigger: CCCCTGACCCCTGTTACCGCATTTGTGTGTATTAAT...ACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp GCACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGGTTCCTGTGGCTTTaGTCATTGCTGTTCTTTCAC +
Preference number: 4 (lower is better)
Translates to: AQACDSDPYKTRQGPQSSRFLWL*SLLFFH
Trigger: GTGAAAGAACAGCAATGAGCAAAGCCACAGGAACCT...GGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585266.5
CDS-3UTR CCA 90 bp GTTGAATTCTGCCCTCACTGCAGATGTGCAGGTCAAACCCAAAGTGGTCAATGGTCTGGGAATCACCGGTaGATTTTCGGACACTCATGT +
Preference number: 4 (lower is better)
Translates to: VEFCPHCRCAGQTQSGQWSGNHR*IFGHSC
Trigger: ACATGAGTGTCCGAAAATCCACCGGTGATTCCCAGA...CCATTGACCACTTTGGGTTTGACCTGCACATCTGCAGTGAGGGCAGAATTCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR CCA 90 bp ACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGAGGATCCCAGGTTCTaGGAATCACCGGTGGATTTT +
Preference number: 4 (lower is better)
Translates to: TPTKLGKDHKVPASVCFREDPRF*ESPVDF
Trigger: AAAATCCACCGGTGATTCCCAGAACCTGGGATCCTC...TCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000585266.5
CDS-3UTR CCA 90 bp ACCAGTGAGTTGTGCTTGTTGAATTCTGCCCTCACTGCAGATGTGCAGGTCAAAGAGGATCCCAGGTTCTaGGAATCACCGGTGGATTTT +
Preference number: 4 (lower is better)
Translates to: TSELCLLNSALTADVQVKEDPRF*ESPVDF
Trigger: AAAATCCACCGGTGATTCCCAGAACCTGGGATCCTC...TTTGACCTGCACATCTGCAGTGAGGGCAGAATTCAACAAGCACAACTCACTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR CCA 90 bp TACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCCCCTTCAGCTGTTTCTaGAGCAGTAGTTCAAACCCA +
Preference number: 4 (lower is better)
Translates to: YKTRQGPQSSSLCLFQSGPFSCF*SSSSNP
Trigger: TGGGTTTGAACTACTGCTCCAGAAACAGCTGAAGGG...GCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp AGTGACAGAAAACTGTACAAGGGACAGCAGTCCCAGCCCTGCCATACACAAGAACCCTTCAGCTGTTTCTaGAGCAGTAGTTCAAACCCA +
Preference number: 4 (lower is better)
Translates to: SDRKLYKGQQSQPCHTQEPFSCF*SSSSNP
Trigger: TGGGTTTGAACTACTGCTCCAGAAACAGCTGAAGGG...TTCTTGTGTATGGCAGGGCTGGGACTGCTGTCCCTTGTACAGTTTTCTGTCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp ACCCCACTTAACATTAGAAGTGCTCTCTCCGACCTACACAAGGAATGCATCTTGCGAAGGTCGGCAATGTaGTGGTCGCACTTCTTCATG +
Preference number: 4 (lower is better)
Translates to: TPLNIRSALSDLHKECILRRSAM*WSHFFM
Trigger: CATGAAGAAGTGCGACCACCACATTGCCGACCTTCG...CAAGATGCATTCCTTGTGTAGGTCGGAGAGAGCACTTCTAATGTTAAGTGGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp CAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCTCTCTTCAAACCATTTaGACTGGGCCTGGTTGTAGA +
Preference number: 4 (lower is better)
Translates to: QACDSDPYKTRQGPQSSSSLQTI*TGPGCR
Trigger: TCTACAACCAGGCCCAGTCCAAATGGTTTGAAGAGA...GCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp ACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCACTAGCTCCAATGTGGTaGTCACCATCTCTTCAAACC +
Preference number: 4 (lower is better)
Translates to: TKLGKDHKVPASVCFRAALAPMW*SPSLQT
Trigger: GGTTTGAAGAGATGGTGACCACCACATTGGAGCTAG...TGCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp CACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCTCTAGCTCCAATGTaGTGGTCACCATCTCTTCAA +
Preference number: 4 (lower is better)
Translates to: HKHVTVTPTKLGKDHKVPALAPM*WSPSLQ
Trigger: TTGAAGAGATGGTGACCACCACATTGGAGCTAGAGC...TGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp GAAAACTGTACAAGGGACAGCAGTCCCAGCCCTGCCATACACAAGAAGACAGAGGGCTCGACTGTGCTTTaGTTGAACATGTCTGTTTCA +
Preference number: 4 (lower is better)
Translates to: ENCTRDSSPSPAIHKKTEGSTVL*LNMSVS
Trigger: TGAAACAGACATGTTCAACCAAAGCACAGTCGAGCC...CTCTGTCTTCTTGTGTATGGCAGGGCTGGGACTGCTGTCCCTTGTACAGTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp AAAATCTTGTTGCTGTCTACCTTCCATCCAACAGGTAAATGCCTCACGACGGTGGGCGACAACCTAGTGTaGCCACAAGAGAGTCTGCTA +
Preference number: 4 (lower is better)
Translates to: KILLLSTFHPTGKCLTTVGDNLV*PQESLL
Trigger: TAGCAGACTCTCTTGTGGCCACACTAGGTTGTCGCC...CACCGTCGTGAGGCATTTACCTGTTGGATGGAAGGTAGACAGCAACAAGATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp ACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGACACCAAGTAAGGGTTTaGTGCAGGGCTCTGGAATGT +
Preference number: 4 (lower is better)
Translates to: TPTKLGKDHKVPASVCFRHQVRV*CRALEC
Trigger: ACATTCCAGAGCCCTGCACCAAACCCTTACTTGGTG...TCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp TGGGGGAAGGATGGATTGGCATTTCCAGAGGAGACTTTACAGATGGCGCCTGATGACTTTTCCAGGGATTaGAAGATGGAGAGAGGGAAA +
Preference number: 4 (lower is better)
Translates to: WGKDGLAFPEETLQMAPDDFSRD*KMERGK
Trigger: TTTCCCTCTCTCCATCTTCCAATCCCTGGAAAAGTC...ATCAGGCGCCATCTGTAAAGTCTCCTCTGGAAATGCCAATCCATCCTTCCCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR CCA 90 bp GACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAAGCACAGCATGGGAGTTTAGACTGACATGGTaGAGAATGTGTTTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: DHKVPASVCFRAASTAWEFRLTW*RMCLLW
Trigger: CCACAGCAAACACATTCTCCACCATGTCAGTCTAAA...CTCCCATGCTGTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR CCA 90 bp GCTTCCAGGGCACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACTGGTCTTAATTCACTaGCAATTTCATAGCCTCACT +
Preference number: 4 (lower is better)
Translates to: ASRAQACDSDPYKTRQGPLVLIH*QFHSLT
Trigger: AGTGAGGCTATGAAATTGCCAGTGAATTAAGACCAG...TGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTGCCCTGGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp CAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCAGGGAAAGAAACCCCTaGTTGGTGAATTCGTTGGTA +
Preference number: 4 (lower is better)
Translates to: QACDSDPYKTRQGPQSSSRERNP*LVNSLV
Trigger: TACCAACGAATTCACCAACCAGGGGTTTCTTTCCCT...GCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp AGTAAGGGTTTGGTGCAGGGCTCTGGAATGTCCAGAAGGAGCGGGAAGCAAAGGGTCCTTCGAATGTTATaGCTTGTATTTCCAAAAGGG +
Preference number: 4 (lower is better)
Translates to: SKGLVQGSGMSRRSGKQRVLRML*LVFPKG
Trigger: CCCTTTTGGAAATACAAGCCATAACATTCGAAGGAC...CCTTTGCTTCCCGCTCCTTCTGGACATTCCAGAGCCCTGCACCAAACCCTTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp GCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAAGCACAGCATCCAGCATTTAGAACGTaGGGAGAAGCGAATTGGTTT +
Preference number: 4 (lower is better)
Translates to: ARTTKFQPLFVSERQAQHPAFRT*GEANWF
Trigger: AAACCAATTCGCTTCTCCCCACGTTCTAAATGCTGG...ATGCTGTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp GAAAACTGTACAAGGGACAGCAGTCCCAGCCCTGCCATACACAAGAAGACAGAGCCAGCATTTAGAACGTaGGGAGAAGCGAATTGGTTT +
Preference number: 4 (lower is better)
Translates to: ENCTRDSSPSPAIHKKTEPAFRT*GEANWF
Trigger: AAACCAATTCGCTTCTCCCCACGTTCTAAATGCTGG...CTCTGTCTTCTTGTGTATGGCAGGGCTGGGACTGCTGTCCCTTGTACAGTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp ACCAGTGAGTTGTGCTTGTTGAATTCTGCCCTCACTGCAGATGTGCAGGTCAAAGGTTACAGCCTCCACTaGGATCAGGGTTTCAACAGT +
Preference number: 4 (lower is better)
Translates to: TSELCLLNSALTADVQVKGYSLH*DQGFNS
Trigger: ACTGTTGAAACCCTGATCCCAGTGGAGGCTGTAACC...TTTGACCTGCACATCTGCAGTGAGGGCAGAATTCAACAAGCACAACTCACTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp TGGGGGAAGGATGGATTGGCATTTCCAGAGGAGACTTTACAGATGGCGCCTGATCGCTCCAGTGCTTGCTaGGAAATTAACAACTTGTTC +
Preference number: 4 (lower is better)
Translates to: WGKDGLAFPEETLQMAPDRSSAC*EINNLF
Trigger: GAACAAGTTGTTAATTTCCCAGCAAGCACTGGAGCG...ATCAGGCGCCATCTGTAAAGTCTCCTCTGGAAATGCCAATCCATCCTTCCCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585266.5
3UTR CAA 72 bp GGCCTGAGACACTCATCTAGAACAAACACCCTCAGCTaGCAGATGAAGCAACAGATCCAGGAAAGCATCATG +
Preference number: 4 (lower is better)
Translates to: GLRHSSRTNTLS*QMKQQIQESIM
Trigger: CATGATGCTTTCCTGGATCTGTTGCTTCATCTGCAAGCTGAGGGTGTTTGTTCTAGATGAGTGTCTCAGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp GCATGCCTGGCTTGTCTTGAGCATTCGCTGAATGAATGCAGATTAATCAGAACACTTTTTGCTTGGCGATaGGGATCCCAGGTTCTGGGA +
Preference number: 4 (lower is better)
Translates to: ACLACLEHSLNECRLIRTLFAWR*GSQVLG
Trigger: TCCCAGAACCTGGGATCCTCATCGCCAAGCAAAAAG...TGTTCTGATTAATCTGCATTCATTCAGCGAATGCTCAAGACAAGCCAGGCATGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp GACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAAGCACAGCATGGGAGTTAGACTCTTTAGACTaGCATGGTGGAGAATGTGTT +
Preference number: 4 (lower is better)
Translates to: DHKVPASVCFRAASTAWELDSLD*HGGECV
Trigger: AACACATTCTCCACCATGTCAGTCTAAAGAGTCTAA...CTCCCATGCTGTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR TCA 90 bp GACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAAGCACAGCATGGGAGCAAGGCTATTGGCTTTaGATGTTTGGAAATCATCCA +
Preference number: 4 (lower is better)
Translates to: DHKVPASVCFRAASTAWEQGYWL*MFGNHP
Trigger: TGGATGATTTCCAAACATTCAAAGCCAATAGCCTTG...CTCCCATGCTGTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR TCA 90 bp TACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCGGTCTGGTGACCAGGTaGTTAAAATCTTGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: YKTRQGPQSSSLCLFQSGGLVTR*LKSCCC
Trigger: ACAGCAACAAGATTTTAATCACCTGGTCACCAGACC...GCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp GCATGCCTGGCTTGTCTTGAGCATTCGCTGAATGAATGCAGATTAATCAGAACACAGACCCGCCCACTTTaGATAAACCCAGCTAAGTCC +
Preference number: 4 (lower is better)
Translates to: ACLACLEHSLNECRLIRTQTRPL*INPAKS
Trigger: GGACTTAGCTGGGTTTATTCAAAGTGGGCGGGTCTG...TGTTCTGATTAATCTGCATTCATTCAGCGAATGCTCAAGACAAGCCAGGCATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp ACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGATCTCTCACCAGGACTTaGGGCAATTCTATGCACGAT +
Preference number: 4 (lower is better)
Translates to: TPTKLGKDHKVPASVCFRSLTRT*GNSMHD
Trigger: ATCGTGCATAGAATTGCCTCAAGTCCTGGTGAGAGA...TCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp ACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAAGCACAGCATGGGAGTTCAAAGATCGACGAATaGGATCCAAACGGTCATTAC +
Preference number: 4 (lower is better)
Translates to: TTKFQPLFVSERQAQHGSSKIDE*DPNGHY
Trigger: GTAATGACCGTTTGGATCTCATTCGTCGATCTTTGA...ACTCCCATGCTGTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp CACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCACAGGGATGCTCAGTCTaGATCCTAAGTCACCATATT +
Preference number: 4 (lower is better)
Translates to: HKHVTVTPTKLGKDHKVPQGCSV*ILSHHI
Trigger: AATATGGTGACTTAGGATTCAGACTGAGCATCCCTG...TGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000580865.5
ENST00000583882.5
CDS-3UTR GCA 90 bp TACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCGTGTTTTCCTTGCTCTaGTTTTTGCTTGGCGATGAG +
Preference number: 4 (lower is better)
Translates to: YKTRQGPQSSSLCLFQSGVFSLL*FLLGDE
Trigger: CTCATCGCCAAGCAAAAAGCAGAGCAAGGAAAACAC...GCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp TACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCCCTTCTGCATTTGTTTaGCCTTCAGCTGTTTCTGGA +
Preference number: 4 (lower is better)
Translates to: YKTRQGPQSSSLCLFQSGPSAFV*PSAVSG
Trigger: TCCAGAAACAGCTGAAGGGCAAACAAATGCAGAAGG...GCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR GCA 90 bp TACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAAGACCAGTGAGTTGTaGTTGTTGAATTCTGCCCTC +
Preference number: 4 (lower is better)
Translates to: YKTRQGPQSSSLCLFQSGKTSEL*LLNSAL
Trigger: GAGGGCAGAATTCAACAAGCACAACTCACTGGTCTT...GCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR GCA 90 bp CAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCAGGAGAGCAGAGGAATaGCCATCTTACATACAACTA +
Preference number: 4 (lower is better)
Translates to: QACDSDPYKTRQGPQSSSRRAEE*PSYIQL
Trigger: TAGTTGTATGTAAGATGGGCATTCCTCTGCTCTCCT...GCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp GTTGAATTCTGCCCTCACTGCAGATGTGCAGGTCAAACCCAAAGTGGTCAATGGTACACTGTTTCGGTGTaGCCAGCTGTTTATCAATCC +
Preference number: 4 (lower is better)
Translates to: VEFCPHCRCAGQTQSGQWYTVSV*PAVYQS
Trigger: GGATTGATAAACAGCTGGGCACACCGAAACAGTGTA...CCATTGACCACTTTGGGTTTGACCTGCACATCTGCAGTGAGGGCAGAATTCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp ACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAATAATCAATCAGGGTTaGCAGGGAAAGAGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: TPTKLGKDHKVPASVCFRIINQG*QGKRAG
Trigger: TCCTGCCCTCTTTCCCTGGCAACCCTGATTGATTAT...TCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp TACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCTGCTGCAATGGGAATTaGTTCTTCACCTCCAGGAAA +
Preference number: 4 (lower is better)
Translates to: YKTRQGPQSSSLCLFQSGCCNGN*FFTSRK
Trigger: TTTCCTGGAGGTGAAGAAGCAATTCCCATTGCAGCA...GCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp ACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTAAGCGAATTGGTTTTTaGCCTCTGTCTGATTCTCGC +
Preference number: 4 (lower is better)
Translates to: TVTPTKLGKDHKVPASVCKRIGF*PLSDSR
Trigger: GCGAGAATCAGACAGAGGGCAAAAACCAATTCGCTT...ACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp ACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTATTAATACACACAAATaGGGTAACAGGGGTCAGGGG +
Preference number: 4 (lower is better)
Translates to: TVTPTKLGKDHKVPASVCINTHK*GNRGQG
Trigger: CCCCTGACCCCTGTTACCGCATTTGTGTGTATTAAT...ACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp AATTCTGCCCTCACTGCAGATGTGCAGGTCAAACCCAAAGTGGTCAATGGGAAACTAGCTCCAATGTGGTaGTCACCATCTCTTCAAACC +
Preference number: 4 (lower is better)
Translates to: NSALTADVQVKPKVVNGKLAPMW*SPSLQT
Trigger: GGTTTGAAGAGATGGTGACCACCACATTGGAGCTAG...TTTCCCATTGACCACTTTGGGTTTGACCTGCACATCTGCAGTGAGGGCAGAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR CCA 90 bp ACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTGGCTCGACTGTGCTTTaGTTGAACATGTCTGTTTCA +
Preference number: 4 (lower is better)
Translates to: TVTPTKLGKDHKVPASVCGSTVL*LNMSVS
Trigger: TGAAACAGACATGTTCAACCAAAGCACAGTCGAGCC...ACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CCA 90 bp TTTGTTTCAGAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGAACTTGTTCTCAGAAATaGAAGGGACATTCTCAAGAA +
Preference number: 4 (lower is better)
Translates to: FVSERQAQHGSQGVFSLRTCSQK*KGHSQE
Trigger: TTCTTGAGAATGTCCCTTCCATTTCTGAGAACAAGT...TCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTCTGAAACAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp CAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCTCACAGCAACCAACTTaGAACACCATTTGGCTTAAG +
Preference number: 4 (lower is better)
Translates to: QACDSDPYKTRQGPQSSSSQQPT*NTIWLK
Trigger: CTTAAGCCAAATGGTGTTCCAAGTTGGTTGCTGTGA...GCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp ACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAAGCACAGCATGGGAGTTCACAGCAACCAACTTaGAACACCATTTGGCTTAAG +
Preference number: 4 (lower is better)
Translates to: TTKFQPLFVSERQAQHGSSQQPT*NTIWLK
Trigger: CTTAAGCCAAATGGTGTTCCAAGTTGGTTGCTGTGA...ACTCCCATGCTGTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp AGTGACAGAAAACTGTACAAGGGACAGCAGTCCCAGCCCTGCCATACACAAGAAAGGGAAAGAAACCCCTaGTTGGTGAATTCGTTGGTA +
Preference number: 4 (lower is better)
Translates to: SDRKLYKGQQSQPCHTQERERNP*LVNSLV
Trigger: TACCAACGAATTCACCAACCAGGGGTTTCTTTCCCT...TTCTTGTGTATGGCAGGGCTGGGACTGCTGTCCCTTGTACAGTTTTCTGTCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp AGGGCACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTTCCAAAAGGGACTTTaGCTCAGCCCAGATTTTTCT +
Preference number: 4 (lower is better)
Translates to: RAQACDSDPYKTRQGPQSFQKGL*LSPDFS
Trigger: AGAAAAATCTGGGCTGAGCCAAAGTCCCTTTTGGAA...ACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTGCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp GCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCGTCCTTCGAATGTTATaGCTTGTATTTCCAAAAGGG +
Preference number: 4 (lower is better)
Translates to: ACDSDPYKTRQGPQSSSLVLRML*LVFPKG
Trigger: CCCTTTTGGAAATACAAGCCATAACATTCGAAGGAC...GAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp GTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTCACACAGTTTATTGTaGTGGTGTTTTCCTTGCTCT +
Preference number: 4 (lower is better)
Translates to: VTVTPTKLGKDHKVPASVSHSLL*WCFPCS
Trigger: AGAGCAAGGAAAACACCATCACAATAAACTGTGTGA...AACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000583882.5
ENST00000585266.5
CDS-3UTR TCA 90 bp GACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTCTTCATGTCTTTCTTaGAGTTCTCACGGAAGTTCA +
Preference number: 4 (lower is better)
Translates to: DSDPYKTRQGPQSSSLCLSSCLS*SSHGSS
Trigger: TGAACTTCCGTGAGAACTTCAAGAAAGACATGAAGA...CAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR TCA 90 bp CACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGGTCAATGGGAAAGATaGAGAAAGATGGATTTCCAG +
Preference number: 4 (lower is better)
Translates to: HKHVTVTPTKLGKDHKVPGQWER*RKMDFQ
Trigger: CTGGAAATCCATCTTTCTTCATCTTTCCCATTGACC...TGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR TCA 90 bp AGGGCACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTCAAGGCTATTGGCTTTaGATGTTTGGAAATCATCCA +
Preference number: 4 (lower is better)
Translates to: RAQACDSDPYKTRQGPQSQGYWL*MFGNHP
Trigger: TGGATGATTTCCAAACATTCAAAGCCAATAGCCTTG...ACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTGCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR GCA 90 bp ACCAGTGAGTTGTGCTTGTTGAATTCTGCCCTCACTGCAGATGTGCAGGTCAAAAAGACCAGTGAGTTGTaGTTGTTGAATTCTGCCCTC +
Preference number: 4 (lower is better)
Translates to: TSELCLLNSALTADVQVKKTSEL*LLNSAL
Trigger: GAGGGCAGAATTCAACAAGCACAACTCACTGGTCTT...TTTGACCTGCACATCTGCAGTGAGGGCAGAATTCAACAAGCACAACTCACTGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR GCA 90 bp GCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAAGCACAGCATCTTGCCTCTCCAAAGTaGAGTCTTTTATTTTCTCAG +
Preference number: 4 (lower is better)
Translates to: ARTTKFQPLFVSERQAQHLASPK*SLLFSQ
Trigger: CTGAGAAAATAAAAGACTGCACTTTGGAGAGGCAAG...ATGCTGTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp AAAATCTTGTTGCTGTCTACCTTCCATCCAACAGGTAAATGCCTCACGACGGTGCACAAACAGATCTTGTaGATCAGTCTCCTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: KILLLSTFHPTGKCLTTVHKQIL*ISLLGG
Trigger: TCCACCCAGGAGACTGATGCACAAGATCTGTTTGTG...CACCGTCGTGAGGCATTTACCTGTTGGATGGAAGGTAGACAGCAACAAGATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp TACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCGACCTACACAAGGAATaGATCTTGAGCCTTCTGTTT +
Preference number: 4 (lower is better)
Translates to: YKTRQGPQSSSLCLFQSGDLHKE*ILSLLF
Trigger: AAACAGAAGGCTCAAGATGCATTCCTTGTGTAGGTC...GCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp GTTGAATTCTGCCCTCACTGCAGATGTGCAGGTCAAACCCAAAGTGGTCAATGGGACCTACACAAGGAATaGATCTTGAGCCTTCTGTTT +
Preference number: 4 (lower is better)
Translates to: VEFCPHCRCAGQTQSGQWDLHKE*ILSLLF
Trigger: AAACAGAAGGCTCAAGATGCATTCCTTGTGTAGGTC...CCATTGACCACTTTGGGTTTGACCTGCACATCTGCAGTGAGGGCAGAATTCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp GCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAAGCACAGCATAAGAACCCACTACATTaGATAGTTCCTTCCAAATCC +
Preference number: 4 (lower is better)
Translates to: ARTTKFQPLFVSERQAQHKNPLH*IVPSKS
Trigger: GGATTTGGAAGGAACTATGCAATGTAGTGGGTTCTT...ATGCTGTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585266.5
CDS-3UTR CCA 90 bp AATTCTGCCCTCACTGCAGATGTGCAGGTCAAACCCAAAGTGGTCAATGGGAAAGACTTTTCCAGGGATTaGAAGATGGAGAGAGGGAAA +
Preference number: 4 (lower is better)
Translates to: NSALTADVQVKPKVVNGKDFSRD*KMERGK
Trigger: TTTCCCTCTCTCCATCTTCCAATCCCTGGAAAAGTC...TTTCCCATTGACCACTTTGGGTTTGACCTGCACATCTGCAGTGAGGGCAGAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR CCA 90 bp ACCAGTGAGTTGTGCTTGTTGAATTCTGCCCTCACTGCAGATGTGCAGGTCAAATCTAAAATTGGTAGCTaGTGTCATGACCCAACCCCA +
Preference number: 4 (lower is better)
Translates to: TSELCLLNSALTADVQVKSKIGS*CHDPTP
Trigger: TGGGGTTGGGTCATGACACCAGCTACCAATTTTAGA...TTTGACCTGCACATCTGCAGTGAGGGCAGAATTCAACAAGCACAACTCACTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR CCA 90 bp GACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGCTGGTCTTAATTCACTaGCAATTTCATAGCCTCACT +
Preference number: 4 (lower is better)
Translates to: DSDPYKTRQGPQSSSLCLLVLIH*QFHSLT
Trigger: AGTGAGGCTATGAAATTGCCAGTGAATTAAGACCAG...CAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp GCACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCGTCCTTCGAATGTTATaGCTTGTATTTCCAAAAGGG +
Preference number: 4 (lower is better)
Translates to: AQACDSDPYKTRQGPQSSVLRML*LVFPKG
Trigger: CCCTTTTGGAAATACAAGCCATAACATTCGAAGGAC...GGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp ACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGATCTAACCTGCTGCAATaGGAATTGCTTCTTCACCTC +
Preference number: 4 (lower is better)
Translates to: TPTKLGKDHKVPASVCFRSNLLQ*ELLLHL
Trigger: GAGGTGAAGAAGCAATTCCCATTGCAGCAGGTTAGA...TCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR CAA 72 bp AAGCCAAGGTCGCTGATGTCCTTCGAATGTTATGGCTaGTATTTCCAAAAGGGACTTTGGCTCAGCCCAGAT +
Preference number: 4 (lower is better)
Translates to: KPRSLMSFECYG*YFQKGLWLSPD
Trigger: ATCTGGGCTGAGCCAAAGTCCCTTTTGGAAATACAAGCCATAACATTCGAAGGACATCAGCGACCTTGGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp CACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCATCTTCATGTCTTTCTTaGAGTTCTCACGGAAGTTCA +
Preference number: 4 (lower is better)
Translates to: HKHVTVTPTKLGKDHKVPSSCLS*SSHGSS
Trigger: TGAACTTCCGTGAGAACTTCAAGAAAGACATGAAGA...TGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR TCA 90 bp ACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCATCTTCATGTCTTTCTTaGAGTTCTCACGGAAGTTCA +
Preference number: 4 (lower is better)
Translates to: TKLGKDHKVPASVCFRAASSCLS*SSHGSS
Trigger: TGAACTTCCGTGAGAACTTCAAGAAAGACATGAAGA...TGCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR TCA 90 bp AGTGACAGAAAACTGTACAAGGGACAGCAGTCCCAGCCCTGCCATACACAAGAAACAAGGAATGCATCTTaGGCCTTCTGTTTAAACACT +
Preference number: 4 (lower is better)
Translates to: SDRKLYKGQQSQPCHTQETRNAS*AFCLNT
Trigger: AGTGTTTAAACAGAAGGCTCAAGATGCATTCCTTGT...TTCTTGTGTATGGCAGGGCTGGGACTGCTGTCCCTTGTACAGTTTTCTGTCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp ACCAGTGAGTTGTGCTTGTTGAATTCTGCCCTCACTGCAGATGTGCAGGTCAAAGTACATCATTGGAAATaGGAAAGGGAGGAGGTACAT +
Preference number: 4 (lower is better)
Translates to: TSELCLLNSALTADVQVKVHHWK*EREEVH
Trigger: ATGTACCTCCTCCCTTTCTCATTTCCAATGATGTAC...TTTGACCTGCACATCTGCAGTGAGGGCAGAATTCAACAAGCACAACTCACTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp AGTGACAGAAAACTGTACAAGGGACAGCAGTCCCAGCCCTGCCATACACAAGAAATCAATTTTATTTACTaGTCTAGGCAGCCAGAGGGT +
Preference number: 4 (lower is better)
Translates to: SDRKLYKGQQSQPCHTQEINFIY*SRQPEG
Trigger: ACCCTCTGGCTGCCTAGATCAGTAAATAAAATTGAT...TTCTTGTGTATGGCAGGGCTGGGACTGCTGTCCCTTGTACAGTTTTCTGTCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp AAAATCTTGTTGCTGTCTACCTTCCATCCAACAGGTAAATGCCTCACGACGGTGCCTTCTGCATTTGTTTaGCCTTCAGCTGTTTCTGGA +
Preference number: 4 (lower is better)
Translates to: KILLLSTFHPTGKCLTTVPSAFV*PSAVSG
Trigger: TCCAGAAACAGCTGAAGGGCAAACAAATGCAGAAGG...CACCGTCGTGAGGCATTTACCTGTTGGATGGAAGGTAGACAGCAACAAGATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp ACCCCACTTAACATTAGAAGTGCTCTCTCCGACCTACACAAGGAATGCATCTTGTACACTGTTTCGGTGTaGCCAGCTGTTTATCAATCC +
Preference number: 4 (lower is better)
Translates to: TPLNIRSALSDLHKECILYTVSV*PAVYQS
Trigger: GGATTGATAAACAGCTGGGCACACCGAAACAGTGTA...CAAGATGCATTCCTTGTGTAGGTCGGAGAGAGCACTTCTAATGTTAAGTGGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp AAAATCTTGTTGCTGTCTACCTTCCATCCAACAGGTAAATGCCTCACGACGGTGTGCTGCAATGGGAATTaGTTCTTCACCTCCAGGAAA +
Preference number: 4 (lower is better)
Translates to: KILLLSTFHPTGKCLTTVCCNGN*FFTSRK
Trigger: TTTCCTGGAGGTGAAGAAGCAATTCCCATTGCAGCA...CACCGTCGTGAGGCATTTACCTGTTGGATGGAAGGTAGACAGCAACAAGATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp GCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAAGCACAGCATGAAGGATATACAATGTaGAGGAAACACATTCATACC +
Preference number: 4 (lower is better)
Translates to: ARTTKFQPLFVSERQAQHEGYTM*RKHIHT
Trigger: GGTATGAATGTGTTTCCTCCACATTGTATATCCTTC...ATGCTGTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp ACCAGTGAGTTGTGCTTGTTGAATTCTGCCCTCACTGCAGATGTGCAGGTCAAATCACACAGTTTATTGTaGTGGTGTTTTCCTTGCTCT +
Preference number: 4 (lower is better)
Translates to: TSELCLLNSALTADVQVKSHSLL*WCFPCS
Trigger: AGAGCAAGGAAAACACCATCACAATAAACTGTGTGA...TTTGACCTGCACATCTGCAGTGAGGGCAGAATTCAACAAGCACAACTCACTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR TCA 90 bp ACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGATCTTCATGTCTTTCTTaGAGTTCTCACGGAAGTTCA +
Preference number: 4 (lower is better)
Translates to: TPTKLGKDHKVPASVCFRSSCLS*SSHGSS
Trigger: TGAACTTCCGTGAGAACTTCAAGAAAGACATGAAGA...TCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR TCA 90 bp AATTCTGCCCTCACTGCAGATGTGCAGGTCAAACCCAAAGTGGTCAATGGGAAACAAGGCTATTGGCTTTaGATGTTTGGAAATCATCCA +
Preference number: 4 (lower is better)
Translates to: NSALTADVQVKPKVVNGKQGYWL*MFGNHP
Trigger: TGGATGATTTCCAAACATTCAAAGCCAATAGCCTTG...TTTCCCATTGACCACTTTGGGTTTGACCTGCACATCTGCAGTGAGGGCAGAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR GCA 90 bp AGGGCACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTTAAATTCTGTAGAGTaGCTATGTATCAATGCCAAG +
Preference number: 4 (lower is better)
Translates to: RAQACDSDPYKTRQGPQSLNSVE*LCINAK
Trigger: CTTGGCATTGATACATAGGCACTCTACAGAATTTAA...ACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTGCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp ACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAAGCACAGCATGGGAGTTTAAATTCTGTAGAGTaGCTATGTATCAATGCCAAG +
Preference number: 4 (lower is better)
Translates to: TTKFQPLFVSERQAQHGSLNSVE*LCINAK
Trigger: CTTGGCATTGATACATAGGCACTCTACAGAATTTAA...ACTCCCATGCTGTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp GCATGCCTGGCTTGTCTTGAGCATTCGCTGAATGAATGCAGATTAATCAGAACATCCCTGGATTCTTTCTaGACTACCAAAAACCCACCA +
Preference number: 4 (lower is better)
Translates to: ACLACLEHSLNECRLIRTSLDSF*TTKNPP
Trigger: TGGTGGGTTTTTGGTAGTGCAGAAAGAATCCAGGGA...TGTTCTGATTAATCTGCATTCATTCAGCGAATGCTCAAGACAAGCCAGGCATGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp GCATGCCTGGCTTGTCTTGAGCATTCGCTGAATGAATGCAGATTAATCAGAACATCTCTTCAAACCATTTaGACTGGGCCTGGTTGTAGA +
Preference number: 4 (lower is better)
Translates to: ACLACLEHSLNECRLIRTSLQTI*TGPGCR
Trigger: TCTACAACCAGGCCCAGTCCAAATGGTTTGAAGAGA...TGTTCTGATTAATCTGCATTCATTCAGCGAATGCTCAAGACAAGCCAGGCATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp ACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAGAAGGATATACAATGTaGAGGAAACACATTCATACC +
Preference number: 4 (lower is better)
Translates to: TKLGKDHKVPASVCFRAAEGYTM*RKHIHT
Trigger: GGTATGAATGTGTTTCCTCCACATTGTATATCCTTC...TGCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR CAA 72 bp AGAAGTGCTCTCTCCGACCTACACAAGGAATGCATCTaGAGCCTTCTGTTTAAACACTCCTTGTCAAGACTA +
Preference number: 4 (lower is better)
Translates to: RSALSDLHKECI*SLLFKHSLSRL
Trigger: TAGTCTTGACAAGGAGTGTTTAAACAGAAGGCTCAAGATGCATTCCTTGTGTAGGTCGGAGAGAGCACTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp ACCCCACTTAACATTAGAAGTGCTCTCTCCGACCTACACAAGGAATGCATCTTGTTAGACTCTTTAGACTaGCATGGTGGAGAATGTGTT +
Preference number: 4 (lower is better)
Translates to: TPLNIRSALSDLHKECILLDSLD*HGGECV
Trigger: AACACATTCTCCACCATGTCAGTCTAAAGAGTCTAA...CAAGATGCATTCCTTGTGTAGGTCGGAGAGAGCACTTCTAATGTTAAGTGGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp AAAATCTTGTTGCTGTCTACCTTCCATCCAACAGGTAAATGCCTCACGACGGTGTTAGACTCTTTAGACTaGCATGGTGGAGAATGTGTT +
Preference number: 4 (lower is better)
Translates to: KILLLSTFHPTGKCLTTVLDSLD*HGGECV
Trigger: AACACATTCTCCACCATGTCAGTCTAAAGAGTCTAA...CACCGTCGTGAGGCATTTACCTGTTGGATGGAAGGTAGACAGCAACAAGATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR TCA 90 bp ACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGACACTCATCTAGTAATTaGTTGGTTTTCACAAAGGGT +
Preference number: 4 (lower is better)
Translates to: TPTKLGKDHKVPASVCFRHSSSN*LVFTKG
Trigger: ACCCTTTGTGAAAACCAATCAATTACTAGATGAGTG...TCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR GCA 90 bp TACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCTTAAATTCTGTAGAGTaGCTATGTATCAATGCCAAG +
Preference number: 4 (lower is better)
Translates to: YKTRQGPQSSSLCLFQSGLNSVE*LCINAK
Trigger: CTTGGCATTGATACATAGGCACTCTACAGAATTTAA...GCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR CAA 72 bp AAGGAATGCATCTTGAGCCTTCTGTTTAAACACTCCTaGTCAAGACTACCTGCAGCTGGAAGTAAAATCACC +
Preference number: 4 (lower is better)
Translates to: KECILSLLFKHS*SRLPAAGSKIT
Trigger: GGTGATTTTACTTCCAGCTGCAGGTAGTCTTGACAAGGAGTGTTTAAACAGAAGGCTCAAGATGCATTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CCA 90 bp GCCAAGGTCGCTGATGTCCTTCGAATGTTATGGCTTGTATTTCCAAAAGGGACTACTTGTTCTCAGAAATaGAAGGGACATTCTCAAGAA +
Preference number: 4 (lower is better)
Translates to: AKVADVLRMLWLVFPKGTTCSQK*KGHSQE
Trigger: TTCTTGAGAATGTCCCTTCCATTTCTGAGAACAAGT...AGTCCCTTTTGGAAATACAAGCCATAACATTCGAAGGACATCAGCGACCTTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
3UTR CAA 72 bp CAGGTTGATCTTGGTGATGGTCACAAGACACTAAATTaGTCAAAATTCACAGAGCTGTATATTTCCAAAGGG +
Preference number: 4 (lower is better)
Translates to: QVDLGDGHKTLN*SKFTELYISKG
Trigger: CCCTTTGGAAATATACAGCTCTGTGAATTTTGACAAATTTAGTGTCTTGTGACCATCACCAAGATCAACCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS GCA 90 bp AGCCCGTCCTCCTTCTCGCCTTCCCACCAGCCGCCGTCCGGGACCTaGAGCAGCGTGATCAGCTCGCCCGCGGCGAAGCGCAGCCCCTGG +
Preference number: 5 (lower is better)
Translates to: SPSSFSPSHQPPSGT*SSVISSPAAKRSPW
Trigger: CCAGGGGCTGCGCTTCGCCGCGGGCGAGCTGATCACGCTGCTGCAGGTCCCGGACGGCGGCTGGTGGGAAGGCGAGAAGGAGGACGGGCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432992.7
CDS CCA 90 bp CGGAGAAGGGGTACAGGGTCCGGCAGCGAGCGCCGGACATGGCCTTaGCGCCCGGGTTCACAGCGCAGCCTGCATTCCCGCCGAGCCCCA +
Preference number: 5 (lower is better)
Translates to: RRRGTGSGSERRTWP*RPGSQRSLHSRRAP
Trigger: TGGGGCTCGGCGGGAATGCAGGCTGCGCTGTGAACCCGGGCGCCAAGGCCATGTCCGGCGCTCGCTGCCGGACCCTGTACCCCTTCTCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432992.7
CDS CCA 90 bp GCTCCCCGGAGAAGGGGTACAGGGTCCGGCAGCGAGCGCCGGACATaGCCTTGGCGCCCGGGTTCACAGCGCAGCCTGCATTCCCGCCGA +
Preference number: 5 (lower is better)
Translates to: APRRRGTGSGSERRT*PWRPGSQRSLHSRR
Trigger: TCGGCGGGAATGCAGGCTGCGCTGTGAACCCGGGCGCCAAGGCCATGTCCGGCGCTCGCTGCCGGACCCTGTACCCCTTCTCCGGGGAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432992.7
CDS-3UTR CAA 90 bp GGGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGCGGCTGGCGAGCTGCTaGCGAAGGTCGGCAATGTGG +
Preference number: 5 (lower is better)
Translates to: GPGNMGEPPARLSGSPFWRLASC*RRSAMW
Trigger: CCACATTGCCGACCTTCGCAAGCAGCTCGCCAGCCG...CCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp GGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGACGGACAGGCCCCAGCTaGCTGGCCTCTGAGACGAGC +
Preference number: 5 (lower is better)
Translates to: GLGIWGSPQLGCPGHPSGRTGPS*LASETS
Trigger: GCTCGTCTCAGAGGCCAGCAAGCTGGGGCCTGTCCG...TCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp GGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGAGACAAGGGCAGGGCTTCGGCTCCCTACCTaGAGGCCCCGGGGGCTCAGG +
Preference number: 5 (lower is better)
Translates to: GKHSMGVRGSSASETRAGLRLPT*RPRGLR
Trigger: CCTGAGCCCCCGGGGCCTCAAGGTAGGGAGCCGAAG...CCCTGCCCTTGTCTCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CAA 90 bp GGGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGTCCACAGGGCGGATGTaGCCCGTCTTGTGCTCTCTG +
Preference number: 5 (lower is better)
Translates to: GPGNMGEPPARLSGSPFWSTGRM*PVLCSL
Trigger: CAGAGAGCACAAGACGGGCAACATCCGCCCTGTGGA...CCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000396115.6
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp TCTGGGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCGCTGGAGGAAGAGCCTaGGGGCTTCCAGGGCACAAG +
Preference number: 5 (lower is better)
Translates to: SGPGNMGEPPARLSGSPFAGGRA*GLPGHK
Trigger: CTTGTGCCCTGGAAGCCCCAAGGCTCTTCCTCCAGC...GAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCCCAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp GGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAGCTGGAGGAAGAGCCTaGGGGCTTCCAGGGCACAAG +
Preference number: 5 (lower is better)
Translates to: GLGIWGSPQLGCPGHPSGAGGRA*GLPGHK
Trigger: CTTGTGCCCTGGAAGCCCCAAGGCTCTTCCTCCAGC...TCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS TCA 90 bp GGATCCCAGGTTCATATTCTGGGCCAGGGCAAGCAGGGGTCTCCCTaGCCCCACGCTGTTCCCACGCCCAGCTCTCGGGCTGAAGGCGAA +
Preference number: 5 (lower is better)
Translates to: GSQVHILGQGKQGSP*PHAVPTPSSRAEGE
Trigger: TTCGCCTTCAGCCCGAGAGCTGGGCGTGGGAACAGCGTGGGGTCAGGGAGACCCCTGCTTGCCCTGGCCCAGAATATGAACCTGGGATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580811.5
CDS-3UTR CAA 90 bp TCTGGGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCCACGGTGCCGTTGCCTaGGGGGTCCTTCTTATCAGC +
Preference number: 5 (lower is better)
Translates to: SGPGNMGEPPARLSGSPFHGAVA*GVLLIS
Trigger: GCTGATAAGAAGGACCCCCAAGGCAACGGCACCGTG...GAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCCCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp TCTGGGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTCCACAGGGCGGATGTaGCCCGTCTTGTGCTCTCTG +
Preference number: 5 (lower is better)
Translates to: SGPGNMGEPPARLSGSPFSTGRM*PVLCSL
Trigger: CAGAGAGCACAAGACGGGCAACATCCGCCCTGTGGA...GAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCCCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000396115.6
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp GGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGAGACAAGGGCAGGGCCAGCCACGGTGCCGTaGCCTTGGGGGTCCTTCTTA +
Preference number: 5 (lower is better)
Translates to: GKHSMGVRGSSASETRAGPATVP*PWGSFL
Trigger: TAAGAAGGACCCCCAAGGCAACGGCACCGTGGCTGG...CCCTGCCCTTGTCTCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp AATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAATCACCAGCGGCTGGCGAGCTGCTaGCGAAGGTCGGCAATGTGG +
Preference number: 5 (lower is better)
Translates to: NMGEPPARLSGSPFWNHQRLASC*RRSAMW
Trigger: CCACATTGCCGACCTTCGCAAGCAGCTCGCCAGCCG...CTGGTGATTCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000579158.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp TCTGGGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCCACAGCTCCCTGTCTTaGGCCGGGTCCACTTTTCGA +
Preference number: 5 (lower is better)
Translates to: SGPGNMGEPPARLSGSPFHSSLS*AGSTFR
Trigger: TCGAAAAGTGGACCCGGCCAAAGACAGGGAGCTGTG...GAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCCCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000396115.6
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp GTGGGTCTGTCTTCTGGGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCCGGATGTTGCCCGTCTaGTGCTCTCTGACCCACAGC +
Preference number: 5 (lower is better)
Translates to: VGLSSGPGNMGEPPARLSRMLPV*CSLTHS
Trigger: GCTGTGGGTCAGAGAGCACAAGACGGGCAACATCCG...GGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCCCAGAAGACAGACCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000396115.6
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp CATCTCACATGTAGGACTGACCCGGCCCCATTAAGAGCCTGTGGTGGGCGGCCCGCTGGAGGAAGAGCCTaGGGGCTTCCAGGGCACAAG +
Preference number: 5 (lower is better)
Translates to: HLTCRTDPAPLRACGGRPAGGRA*GLPGHK
Trigger: CTTGTGCCCTGGAAGCCCCAAGGCTCTTCCTCCAGC...GGGCCGCCCACCACAGGCTCTTAATGGGGCCGGGTCAGTCCTACATGTGAGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp ACAGTCCTGAACACCACACGCAATCTCCAAAGGCCATCGCCCCAACCTCACCCCCGGACAGGCCCCAGCTaGCTGGCCTCTGAGACGAGC +
Preference number: 5 (lower is better)
Translates to: TVLNTTRNLQRPSPQPHPRTGPS*LASETS
Trigger: GCTCGTCTCAGAGGCCAGCAAGCTGGGGCCTGTCCG...GGGGTGAGGTTGGGGCGATGGCCTTTGGAGATTGCGTGTGGTGTTCAGGACTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CAA 90 bp GGGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGCCGCAGAAATTCTCCTaGGCCAACAGGGTGCTGAGT +
Preference number: 5 (lower is better)
Translates to: GPGNMGEPPARLSGSPFWPQKFS*ANRVLS
Trigger: ACTCAGCACCCTGTTGGCCAAGGAGAATTTCTGCGG...CCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CAA 90 bp GGGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAGACGTGAGCAGCAATaGAGCACCCATCCGTCCCTT +
Preference number: 5 (lower is better)
Translates to: GPGNMGEPPARLSGSPFWRREQQ*STHPSL
Trigger: AAGGGACGGATGGGTGCTCAATTGCTGCTCACGTCT...CCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CAA 90 bp GGGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGGTGTCTGTGAAGGGGTaGCTTCCGGTCATCTCCTTC +
Preference number: 5 (lower is better)
Translates to: GPGNMGEPPARLSGSPFWVSVKG*LPVISF
Trigger: GAAGGAGATGACCGGAAGCAACCCCTTCACAGACAC...CCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS TCA 90 bp ATCCTAAGTCACCATATTCTGGGCCAGGGCAAGCAGGGGTCTCCCTaGCCCCACGCTGTTCCCACGCCCAGCTCTCGGGCTGAAGGCGAA +
Preference number: 5 (lower is better)
Translates to: ILSHHILGQGKQGSP*PHAVPTPSSRAEGE
Trigger: TTCGCCTTCAGCCCGAGAGCTGGGCGTGGGAACAGCGTGGGGTCAGGGAGACCCCTGCTTGCCCTGGCCCAGAATATGGTGACTTAGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000580865.5
ENST00000583882.5
CDS TCA 90 bp GGGGTCTCCCTGACCCCACGCTGTTCCCACGCCCAGCTCTCGGGCTaGAGGCGAATTAAGGAAGCCTCCTGCACAGGCTCTGAGAGAACT +
Preference number: 5 (lower is better)
Translates to: GVSLTPRCSHAQLSG*RRIKEASCTGSERT
Trigger: AGTTCTCTCAGAGCCTGTGCAGGAGGCTTCCTTAATTCGCCTTCAGCCCGAGAGCTGGGCGTGGGAACAGCGTGGGGTCAGGGAGACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580811.5
CDS CCA 90 bp CGGGAAATGGGGCTGAGGCAAGTCGCTAGCCCAGGGCCAGTGTTCTaGGCACCCCAGCGGAGGTTCCTGTGGCTTTGCTCATTGCTGTTC +
Preference number: 5 (lower is better)
Translates to: REMGLRQVASPGPVF*APQRRFLWLCSLLF
Trigger: GAACAGCAATGAGCAAAGCCACAGGAACCTCCGCTGGGGTGCCCAGAACACTGGCCCTGGGCTAGCGACTTGCCTCAGCCCCATTTCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000578655.1
ENST00000579140.5
ENST00000580043.1
ENST00000585266.5
CDS CCA 90 bp GAAGCCCTCAGACTCAGCACCAAGACTCCGCCGGCTTCCTCTTCATaGCAGCCTCTCCGGGAAATGGGGCTGAGGCAAGTCGCTAGCCCA +
Preference number: 5 (lower is better)
Translates to: EALRLSTKTPPASSS*QPLREMGLRQVASP
Trigger: TGGGCTAGCGACTTGCCTCAGCCCCATTTCCCGGAGAGGCTGCCATGAAGAGGAAGCCGGCGGAGTCTTGGTGCTGAGTCTGAGGGCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000578655.1
ENST00000579140.5
ENST00000580043.1
ENST00000585266.5
CDS-3UTR CAA 90 bp GGGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGTCCTTGCTCTGCTTTTaGCTTGGCGATGAGGATCCC +
Preference number: 5 (lower is better)
Translates to: GPGNMGEPPARLSGSPFWSLLCF*LGDEDP
Trigger: GGGATCCTCATCGCCAAGCAAAAAGCAGAGCAAGGA...CCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000396115.6
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp GGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGAGACAAGGGCAGGGCACGGTGCCGTTGCCTaGGGGGTCCTTCTTATCAGC +
Preference number: 5 (lower is better)
Translates to: GKHSMGVRGSSASETRAGHGAVA*GVLLIS
Trigger: GCTGATAAGAAGGACCCCCAAGGCAACGGCACCGTG...CCCTGCCCTTGTCTCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp AATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAATCACCAGCCAGCCACGGTGCCGTaGCCTTGGGGGTCCTTCTTA +
Preference number: 5 (lower is better)
Translates to: NMGEPPARLSGSPFWNHQPATVP*PWGSFL
Trigger: TAAGAAGGACCCCCAAGGCAACGGCACCGTGGCTGG...CTGGTGATTCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000579158.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp TGTCCAGAAGGAGCGGGAAGCAAAGGTGGCGGGACACTGCCTGAAAGGCGACAACGGCTGGCGAGCTGCTaGCGAAGGTCGGCAATGTGG +
Preference number: 5 (lower is better)
Translates to: CPEGAGSKGGGTLPERRQRLASC*RRSAMW
Trigger: CCACATTGCCGACCTTCGCAAGCAGCTCGCCAGCCG...TTGTCGCCTTTCAGGCAGTGTCCCGCCACCTTTGCTTCCCGCTCCTTCTGGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp TCTGGGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCGGCTCTTCCTGGAGGTaGTCACAGCAACCAACTTGG +
Preference number: 5 (lower is better)
Translates to: SGPGNMGEPPARLSGSPFGSSWR*SQQPTW
Trigger: CCAAGTTGGTTGCTGTGACAACCTCCAGGAAGAGCC...GAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCCCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CAA 90 bp GCTTCCAGGGCACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACTTCGGCTCCCTACCTaGAGGCCCCGGGGGCTCAGG +
Preference number: 5 (lower is better)
Translates to: ASRAQACDSDPYKTRQGPLRLPT*RPRGLR
Trigger: CCTGAGCCCCCGGGGCCTCAAGGTAGGGAGCCGAAG...TGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTGCCCTGGAAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CAA 90 bp GGATCCAGAAATGTCTCTGGTTCGCATAGAGAGGTACCCAACTGGTCTCGGGACGCGCCGGACATGGCCTaGGCGCCCGGGTTCACAGCG +
Preference number: 5 (lower is better)
Translates to: GSRNVSGSHREVPNWSRDAPDMA*APGFTA
Trigger: CGCTGTGAACCCGGGCGCCAAGGCCATGTCCGGCGC...GTCCCGAGACCAGTTGGGTACCTCTCTATGCGAACCAGAGACATTTCTGGATCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432992.7
CDS GCA 90 bp GCTTCTTCTCTGGGGGCTGCTACCTCAGAGGAGAGTCTTGGGTCCTaGCTGAAGCCCTCAGACTCAGCACCAAGACTCCGCCGGCTTCCT +
Preference number: 5 (lower is better)
Translates to: ASSLGAATSEESLGS*LKPSDSAPRLRRLP
Trigger: AGGAAGCCGGCGGAGTCTTGGTGCTGAGTCTGAGGGCTTCAGGCAGGACCCAAGACTCTCCTCTGAGGTAGCAGCCCCCAGAGAAGAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580043.1
CDS-3UTR CAA 90 bp GGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAGGTATCCATTCACTGTaGGAGGCAGAGAGCTCCTGT +
Preference number: 5 (lower is better)
Translates to: GLGIWGSPQLGCPGHPSGGIHSL*EAESSC
Trigger: ACAGGAGCTCTCTGCCTCCAACAGTGAATGGATACC...TCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000396115.6
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000585266.5
CDS-3UTR CAA 90 bp TCTGGGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCGGTATCCATTCACTGTaGGAGGCAGAGAGCTCCTGT +
Preference number: 5 (lower is better)
Translates to: SGPGNMGEPPARLSGSPFGIHSL*EAESSC
Trigger: ACAGGAGCTCTCTGCCTCCAACAGTGAATGGATACC...GAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCCCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000396115.6
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000585266.5
CDS-3UTR CAA 90 bp TCTGGGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGCTCTGCTTTTTGCTaGGCGATGAGGATCCCAGGT +
Preference number: 5 (lower is better)
Translates to: SGPGNMGEPPARLSGSPFCSAFC*AMRIPG
Trigger: ACCTGGGATCCTCATCGCCAAGCAAAAAGCAGAGCA...GAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCCCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000396115.6
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp TCTGGGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTCCTTGCTCTGCTTTTaGCTTGGCGATGAGGATCCC +
Preference number: 5 (lower is better)
Translates to: SGPGNMGEPPARLSGSPFSLLCF*LGDEDP
Trigger: GGGATCCTCATCGCCAAGCAAAAAGCAGAGCAAGGA...GAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCCCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000396115.6
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp AATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAATCACCAGCACGGTGCCGTTGCCTaGGGGGTCCTTCTTATCAGC +
Preference number: 5 (lower is better)
Translates to: NMGEPPARLSGSPFWNHQHGAVA*GVLLIS
Trigger: GCTGATAAGAAGGACCCCCAAGGCAACGGCACCGTG...CTGGTGATTCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000579158.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp CTGTTTGTTTCAGAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCCGGCTGGCGAGCTGCTaGCGAAGGTCGGCAATGTGG +
Preference number: 5 (lower is better)
Translates to: LFVSERQAQHGSQGVFSLRLASC*RRSAMW
Trigger: CCACATTGCCGACCTTCGCAAGCAGCTCGCCAGCCG...GAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTCTGAAACAAACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp TGTTTCAGAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGAGACGGCTGGCGAGCTGCTaGCGAAGGTCGGCAATGTGG +
Preference number: 5 (lower is better)
Translates to: CFRAASTAWESGGLQPQRRLASC*RRSAMW
Trigger: CCACATTGCCGACCTTCGCAAGCAGCTCGCCAGCCG...TCTCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTCTGAAACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp AATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAATCACCAGCGGATGTTGCCCGTCTaGTGCTCTCTGACCCACAGC +
Preference number: 5 (lower is better)
Translates to: NMGEPPARLSGSPFWNHQRMLPV*CSLTHS
Trigger: GCTGTGGGTCAGAGAGCACAAGACGGGCAACATCCG...CTGGTGATTCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000323816.8
ENST00000396115.6
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000579158.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp CAGAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGAGACAAGGTCCACAGGGCGGATGTaGCCCGTCTTGTGCTCTCTG +
Preference number: 5 (lower is better)
Translates to: QSGKHSMGVRGSSASETRSTGRM*PVLCSL
Trigger: CAGAGAGCACAAGACGGGCAACATCCGCCCTGTGGA...CCTTGTCTCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp AATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAATCACCAGTCCACAGGGCGGATGTaGCCCGTCTTGTGCTCTCTG +
Preference number: 5 (lower is better)
Translates to: NMGEPPARLSGSPFWNHQSTGRM*PVLCSL
Trigger: CAGAGAGCACAAGACGGGCAACATCCGCCCTGTGGA...CTGGTGATTCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000323816.8
ENST00000396115.6
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000579158.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp TGCTGGCCTCTGAGACGAGCTGGTTTGTTTCCATCCCTGAAGCCTTTGGACGAGCGGACAGGCCCCAGCTaGCTGGCCTCTGAGACGAGC +
Preference number: 5 (lower is better)
Translates to: CWPLRRAGLFPSLKPLDERTGPS*LASETS
Trigger: GCTCGTCTCAGAGGCCAGCAAGCTGGGGCCTGTCCG...CTCGTCCAAAGGCTTCAGGGATGGAAACAAACCAGCTCGTCTCAGAGGCCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp GGAAGAGCCTTGGGGCTTCCAGGGCACAAGCATGTGACAGTGACCCCTACAAAACGGACAGGCCCCAGCTaGCTGGCCTCTGAGACGAGC +
Preference number: 5 (lower is better)
Translates to: GRALGLPGHKHVTVTPTKRTGPS*LASETS
Trigger: GCTCGTCTCAGAGGCCAGCAAGCTGGGGCCTGTCCG...TTTTGTAGGGGTCACTGTCACATGCTTGTGCCCTGGAAGCCCCAAGGCTCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp TGTCCAGAAGGAGCGGGAAGCAAAGGTGGCGGGACACTGCCTGAAAGGCGACAAGGAAGCAGAGACTCGTaGGCTTCGCAGAGCGAGCGG +
Preference number: 5 (lower is better)
Translates to: CPEGAGSKGGGTLPERRQGSRDS*ASQSER
Trigger: CCGCTCGCTCTGCGAAGCCAACGAGTCTCTGCTTCC...TTGTCGCCTTTCAGGCAGTGTCCCGCCACCTTTGCTTCCCGCTCCTTCTGGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432992.7
CDS TCA 90 bp TCCTACAGTAGCGTGACATTGGGAAGTCTGCGGCCCATAAACCCCTaGGGTCAGAGGCAGCACACACGTGACCTCCGGGGTTGCGTGAGC +
Preference number: 5 (lower is better)
Translates to: SYSSVTLGSLRPINP*GQRQHTRDLRGCVS
Trigger: GCTCACGCAACCCCGGAGGTCACGTGTGTGCTGCCTCTGACCTCAGGGGTTTATGGGCCGCAGACTTCCCAATGTCACGCTACTGTAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542249.5
CDS CCA 90 bp GAACAGCTAACCTTCTCTGGGGGCTGCTACCTCAGAGGAGAGTCTTaGGTCCTGCCTGAAGCCCTCAGACTCAGCACCAAGACTCCGCCG +
Preference number: 5 (lower is better)
Translates to: EQLTFSGGCYLRGES*VLPEALRLSTKTPP
Trigger: CGGCGGAGTCTTGGTGCTGAGTCTGAGGGCTTCAGGCAGGACCCAAGACTCTCCTCTGAGGTAGCAGCCCCCAGAGAAGGTTAGCTGTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000578655.1
ENST00000579140.5
ENST00000584146.6
ENST00000585266.5
CDS-3UTR CAA 90 bp GTGGGTCTGTCTTCTGGGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCAGTAGCTCCACTCGGTaGGTTTCAGCAGCTGCTGTT +
Preference number: 5 (lower is better)
Translates to: VGLSSGPGNMGEPPARLSSSSTR*VSAAAV
Trigger: AACAGCAGCTGCTGAAACCAACCGAGTGGAGCTACT...GGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCCCAGAAGACAGACCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp TGTCCAGAAGGAGCGGGAAGCAAAGGTGGCGGGACACTGCCTGAAAGGCGACAACACGGTGCCGTTGCCTaGGGGGTCCTTCTTATCAGC +
Preference number: 5 (lower is better)
Translates to: CPEGAGSKGGGTLPERRQHGAVA*GVLLIS
Trigger: GCTGATAAGAAGGACCCCCAAGGCAACGGCACCGTG...TTGTCGCCTTTCAGGCAGTGTCCCGCCACCTTTGCTTCCCGCTCCTTCTGGACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp GCTTCCAGGGCACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACGGCTGGCGAGCTGCTaGCGAAGGTCGGCAATGTGG +
Preference number: 5 (lower is better)
Translates to: ASRAQACDSDPYKTRQGPRLASC*RRSAMW
Trigger: CCACATTGCCGACCTTCGCAAGCAGCTCGCCAGCCG...TGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTGCCCTGGAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp TCTGGGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCGGGCTCGACTGTGCTTaGGTTGAACATGTCTGTTTC +
Preference number: 5 (lower is better)
Translates to: SGPGNMGEPPARLSGSPFGLDCA*VEHVCF
Trigger: GAAACAGACATGTTCAACCAAAGCACAGTCGAGCCC...GAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCCCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000396115.6
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp GGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAGGGCTCGACTGTGCTTaGGTTGAACATGTCTGTTTC +
Preference number: 5 (lower is better)
Translates to: GLGIWGSPQLGCPGHPSGGLDCA*VEHVCF
Trigger: GAAACAGACATGTTCAACCAAAGCACAGTCGAGCCC...TCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000396115.6
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp AATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAATCACCAGCACAGCTCCCTGTCTTaGGCCGGGTCCACTTTTCGA +
Preference number: 5 (lower is better)
Translates to: NMGEPPARLSGSPFWNHQHSSLS*AGSTFR
Trigger: TCGAAAAGTGGACCCGGCCAAAGACAGGGAGCTGTG...CTGGTGATTCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000323816.8
ENST00000396115.6
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000579158.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp AATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAATCACCAGCCATCCCTGAAGCCTTaGGACGAGCTGGATGAGGTC +
Preference number: 5 (lower is better)
Translates to: NMGEPPARLSGSPFWNHQPSLKP*DELDEV
Trigger: GACCTCATCCAGCTCGTCCAAAGGCTTCAGGGATGG...CTGGTGATTCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp GCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAAGCACAGCATCTTCGGCTCCCTACCTaGAGGCCCCGGGGGCTCAGG +
Preference number: 5 (lower is better)
Translates to: ARTTKFQPLFVSERQAQHLRLPT*RPRGLR
Trigger: CCTGAGCCCCCGGGGCCTCAAGGTAGGGAGCCGAAG...ATGCTGTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS GCA 90 bp TCACCGGTGGATTTTCGGACACTCATGTGGGCAGTCTCTGGAGGGTaGGCTGGGGTCCCTGATGCGTGGTATCCATTCACTGTTGGAGGC +
Preference number: 5 (lower is better)
Translates to: SPVDFRTLMWAVSGG*AGVPDAWYPFTVGG
Trigger: GCCTCCAACAGTGAATGGATACCACGCATCAGGGACCCCAGCGCACCCTCCAGAGACTGCCCACATGAGTGTCCGAAAATCCACCGGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000323816.8
ENST00000396115.6
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000578599.5
ENST00000579158.5
ENST00000580043.1
ENST00000584146.6
ENST00000584389.5
ENST00000585266.5
CDS GCA 90 bp CTTTCCGGGCCTTCTCCACCGAGGCATAGCGGCTGGCGAGCTGCTTaGGAAGGTCGGCAATGTGGTGGTCGCACTTCTTCATGTCTTTCT +
Preference number: 5 (lower is better)
Translates to: LSGPSPPRHSGWRAA*EGRQCGGRTSSCLS
Trigger: AGAAAGACATGAAGAAGTGCGACCACCACATTGCCGACCTTCGCAAGCAGCTCGCCAGCCGCTATGCCTCGGTGGAGAAGGCCCGGAAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000578456.1
ENST00000579158.5
ENST00000580865.5
ENST00000585266.5
CDS CCA 90 bp GATCCCAGGTTCTGGGAATCACCGGTGGATTTTCGGACACTCATGTaGGCAGTCTCTGGAGGGTGCGCTGGGGTCCCTGATGCGTGGTAT +
Preference number: 5 (lower is better)
Translates to: DPRFWESPVDFRTLM*AVSGGCAGVPDAWY
Trigger: ATACCACGCATCAGGGACCCCAGCGCACCCTCCAGAGACTGCCCACATGAGTGTCCGAAAATCCACCGGTGATTCCCAGAACCTGGGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000323816.8
ENST00000396115.6
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000578599.5
ENST00000579158.5
ENST00000580043.1
ENST00000584146.6
ENST00000584389.5
ENST00000585266.5
CDS CCA 90 bp AGGTTCTGTTGGAGGCAGAGAGCTCCTGTGAGAGCCAGGGCTGGCTaGAATCCCAGGAGAACTGCTGGGACGTTCCCAGGTGGTCTCATT +
Preference number: 5 (lower is better)
Translates to: RFCWRQRAPVRARAG*NPRRTAGTFPGGLI
Trigger: AATGAGACCACCTGGGAACGTCCCAGCAGTTCTCCTGGGATTCCAGCCAGCCCTGGCTCTCACAGGAGCTCTCTGCCTCCAACAGAACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578655.1
CDS CCA 90 bp CAGGGGGTCTTCAGCCCAGAAGTAGTCGCAGTAGCTCCACTCGGTTaGTTTCAGCAGCTGCTGTTCCGGCATCGTGTCTGGGTGAGGGAA +
Preference number: 5 (lower is better)
Translates to: QGVFSPEVVAVAPLG*FQQLLFRHRVWVRE
Trigger: TTCCCTCACCCAGACACGATGCCGGAACAGCAGCTGCTGAAACCAACCGAGTGGAGCTACTGCGACTACTTCTGGGCTGAAGACCCCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583882.5
CDS-3UTR CAA 90 bp GAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGAGACAAGGGCGGTATCCATTCACTGTaGGAGGCAGAGAGCTCCTGT +
Preference number: 5 (lower is better)
Translates to: ERQAQHGSQGVFSLRDKGGIHSL*EAESSC
Trigger: ACAGGAGCTCTCTGCCTCCAACAGTGAATGGATACC...GCCCTTGTCTCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000585266.5
CDS-3UTR CAA 90 bp GGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGAGACAAGGGCAGGGGGTATCCATTCACTGTaGGAGGCAGAGAGCTCCTGT +
Preference number: 5 (lower is better)
Translates to: GKHSMGVRGSSASETRAGGIHSL*EAESSC
Trigger: ACAGGAGCTCTCTGCCTCCAACAGTGAATGGATACC...CCCTGCCCTTGTCTCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000585266.5
CDS-3UTR CAA 90 bp GAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGAGACAAGGGCAGTAGCTCCACTCGGTaGGTTTCAGCAGCTGCTGTT +
Preference number: 5 (lower is better)
Translates to: ERQAQHGSQGVFSLRDKGSSSTR*VSAAAV
Trigger: AACAGCAGCTGCTGAAACCAACCGAGTGGAGCTACT...GCCCTTGTCTCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp AATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAATCACCAGGTCTTGTTGCTCAGCTaGATCTCCAGCTGCTGGGTC +
Preference number: 5 (lower is better)
Translates to: NMGEPPARLSGSPFWNHQVLLLS*ISSCWV
Trigger: GACCCAGCAGCTGGAGATCAAGCTGAGCAACAAGAC...CTGGTGATTCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000579158.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp GAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGAGACAAGGGCTCCTCCTCTGTCTTGTaGCTCAGCTTGATCTCCAGC +
Preference number: 5 (lower is better)
Translates to: ERQAQHGSQGVFSLRDKGSSSVL*LSLISS
Trigger: GCTGGAGATCAAGCTGAGCAACAAGACAGAGGAGGA...GCCCTTGTCTCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp GGGGTGGTGCGGGGGCAGGTGGGTTACAGCCTCCACTGGGATCAGGGTTTCAACATGTCCTCCTCTGTCTaGTTGCTCAGCTTGATCTCC +
Preference number: 5 (lower is better)
Translates to: GVVRGQVGYSLHWDQGFNMSSSV*LLSLIS
Trigger: GGAGATCAAGCTGAGCAACAAGACAGAGGAGGACAT...GTTGAAACCCTGATCCCAGTGGAGGCTGTAACCCACCTGCCCCCGCACCACCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CAA 90 bp GTGGGTCTGTCTTCTGGGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCATGTCCTCCTCTGTCTaGTTGCTCAGCTTGATCTCC +
Preference number: 5 (lower is better)
Translates to: VGLSSGPGNMGEPPARLSMSSSV*LLSLIS
Trigger: GGAGATCAAGCTGAGCAACAAGACAGAGGAGGACAT...GGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCCCAGAAGACAGACCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp ACAGTCCTGAACACCACACGCAATCTCCAAAGGCCATCGCCCCAACCTCACCCCCACAGCTCCCTGTCTTaGGCCGGGTCCACTTTTCGA +
Preference number: 5 (lower is better)
Translates to: TVLNTTRNLQRPSPQPHPHSSLS*AGSTFR
Trigger: TCGAAAAGTGGACCCGGCCAAAGACAGGGAGCTGTG...GGGGTGAGGTTGGGGCGATGGCCTTTGGAGATTGCGTGTGGTGTTCAGGACTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CAA 90 bp TGTCCAGAAGGAGCGGGAAGCAAAGGTGGCGGGACACTGCCTGAAAGGCGACAACACAGCTCCCTGTCTTaGGCCGGGTCCACTTTTCGA +
Preference number: 5 (lower is better)
Translates to: CPEGAGSKGGGTLPERRQHSSLS*AGSTFR
Trigger: TCGAAAAGTGGACCCGGCCAAAGACAGGGAGCTGTG...TTGTCGCCTTTCAGGCAGTGTCCCGCCACCTTTGCTTCCCGCTCCTTCTGGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp ATGGATTTCCAGGGCATGGGCTCCCGACTAGAATCTGCCCCTCGCTCATGCTTCCGGATGTTGCCCGTCTaGTGCTCTCTGACCCACAGC +
Preference number: 5 (lower is better)
Translates to: MDFQGMGSRLESAPRSCFRMLPV*CSLTHS
Trigger: GCTGTGGGTCAGAGAGCACAAGACGGGCAACATCCG...GAAGCATGAGCGAGGGGCAGATTCTAGTCGGGAGCCCATGCCCTGGAAATCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR CAA 90 bp GGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGAGACAAGGGCAGGGAGTTCCAGCCTCTGTTaGTTTCAGAGCGGCAAGCAC +
Preference number: 5 (lower is better)
Translates to: GKHSMGVRGSSASETRAGSSSLC*FQSGKH
Trigger: GTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACT...CCCTGCCCTTGTCTCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp GAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGAGACAAGGGCAGTTCCAGCCTCTGTTaGTTTCAGAGCGGCAAGCAC +
Preference number: 5 (lower is better)
Translates to: ERQAQHGSQGVFSLRDKGSSSLC*FQSGKH
Trigger: GTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACT...GCCCTTGTCTCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp TCCAGAAATGTCTCTGGTTCGCATAGAGAGGTACCCAACTGGTCTCGGGACTCACGGACAGGCCCCAGCTaGCTGGCCTCTGAGACGAGC +
Preference number: 5 (lower is better)
Translates to: SRNVSGSHREVPNWSRDSRTGPS*LASETS
Trigger: GCTCGTCTCAGAGGCCAGCAAGCTGGGGCCTGTCCG...TGAGTCCCGAGACCAGTTGGGTACCTCTCTATGCGAACCAGAGACATTTCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CAA 90 bp GGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGAGACAAGGGCAGGGACACCAAGTAAGGGTTaGGTGCAGGGCTCTGGAATG +
Preference number: 5 (lower is better)
Translates to: GKHSMGVRGSSASETRAGTPSKG*VQGSGM
Trigger: CATTCCAGAGCCCTGCACCAAACCCTTACTTGGTGT...CCCTGCCCTTGTCTCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp AATGTCCAGAAGGAGCGGGAAGCAAAGGTGGCGGGACACTGCCTGAAAGGCGACACCCGGATAGCGTGCTaGCCTCTCCAAAGTGCAGTC +
Preference number: 5 (lower is better)
Translates to: NVQKEREAKVAGHCLKGDTRIAC*PLQSAV
Trigger: GACTGCACTTTGGAGAGGCAAGCACGCTATCCGGGT...GTCGCCTTTCAGGCAGTGTCCCGCCACCTTTGCTTCCCGCTCCTTCTGGACATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CAA 90 bp GGGCTCCCGACTAGAATCTGCCCCTCGCTCATGCTTCTCCCGGCCCCTTTAGACCAAGGGGCCTATGTGTaGCCACTGACTGAAAGCACT +
Preference number: 5 (lower is better)
Translates to: GLPTRICPSLMLLPAPLDQGAYV*PLTEST
Trigger: AGTGCTTTCAGTCAGTGGCAACACATAGGCCCCTTG...GTCTAAAGGGGCCGGGAGAAGCATGAGCGAGGGGCAGATTCTAGTCGGGAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CAA 90 bp CATCTCACATGTAGGACTGACCCGGCCCCATTAAGAGCCTGTGGTGGGCGGCCCAGCCCTAAGAACAGCTaGTGGGCACAGCTGGCATTT +
Preference number: 5 (lower is better)
Translates to: HLTCRTDPAPLRACGGRPSPKNS*WAQLAF
Trigger: AAATGCCAGCTGTGCCCACAAGCTGTTCTTAGGGCT...GGGCCGCCCACCACAGGCTCTTAATGGGGCCGGGTCAGTCCTACATGTGAGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS TCA 90 bp AGATCTCCATGTCCACAGGGCGGATGTTGCCCGTCTTGTGCTCTCTaGCCCACAGCTCCCTGTCTTTGGCCGGGTCCACTTTTCGAAGCA +
Preference number: 5 (lower is better)
Translates to: RSPCPQGGCCPSCAL*PTAPCLWPGPLFEA
Trigger: TGCTTCGAAAAGTGGACCCGGCCAAAGACAGGGAGCTGTGGGTCAGAGAGCACAAGACGGGCAACATCCGCCCTGTGGACATGGAGATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000323816.8
ENST00000396115.6
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000578456.1
ENST00000579158.5
ENST00000580865.5
ENST00000581112.5
ENST00000585266.5
CDS CCA 90 bp ATTCACTGTTGGAGGCAGAGAGCTCCTGTGAGAGCCAGGGCTGGCTaGAATCCCAGGAGAACTGCTGGGACGTTCCCAGGTGGTCTCATT +
Preference number: 5 (lower is better)
Translates to: IHCWRQRAPVRARAG*NPRRTAGTFPGGLI
Trigger: AATGAGACCACCTGGGAACGTCCCAGCAGTTCTCCTGGGATTCCAGCCAGCCCTGGCTCTCACAGGAGCTCTCTGCCTCCAACAGTGAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000323816.8
ENST00000396115.6
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000578599.5
ENST00000579158.5
ENST00000580043.1
ENST00000584146.6
ENST00000584389.5
ENST00000585266.5
CDS-3UTR CAA 90 bp AATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAATCACCAGTGCTCTGCTTTTTGCTaGGCGATGAGGATCCCAGGT +
Preference number: 5 (lower is better)
Translates to: NMGEPPARLSGSPFWNHQCSAFC*AMRIPG
Trigger: ACCTGGGATCCTCATCGCCAAGCAAAAAGCAGAGCA...CTGGTGATTCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000323816.8
ENST00000396115.6
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000579158.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp GTGGAGGAAACACATTCATACCGGGGTGAGGAGTGCTGGCGGGAGACACGGCTCTGCTCTGCTTTTTGCTaGGCGATGAGGATCCCAGGT +
Preference number: 5 (lower is better)
Translates to: VEETHSYRGEECWRETRLCSAFC*AMRIPG
Trigger: ACCTGGGATCCTCATCGCCAAGCAAAAAGCAGAGCA...GAGCCGTGTCTCCCGCCAGCACTCCTCACCCCGGTATGAATGTGTTTCCTCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CAA 90 bp AATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAATCACCAGTCCTTGCTCTGCTTTTaGCTTGGCGATGAGGATCCC +
Preference number: 5 (lower is better)
Translates to: NMGEPPARLSGSPFWNHQSLLCF*LGDEDP
Trigger: GGGATCCTCATCGCCAAGCAAAAAGCAGAGCAAGGA...CTGGTGATTCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000323816.8
ENST00000396115.6
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000579158.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp AATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAATCACCAGAGTAGCTCCACTCGGTaGGTTTCAGCAGCTGCTGTT +
Preference number: 5 (lower is better)
Translates to: NMGEPPARLSGSPFWNHQSSSTR*VSAAAV
Trigger: AACAGCAGCTGCTGAAACCAACCGAGTGGAGCTACT...CTGGTGATTCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000579158.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp AAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAAGCACAGCATGGGAGTCAGGGCCAGCCACGGTGCCGTaGCCTTGGGGGTCCTTCTTA +
Preference number: 5 (lower is better)
Translates to: KVPASVCFRAASTAWESGPATVP*PWGSFL
Trigger: TAAGAAGGACCCCCAAGGCAACGGCACCGTGGCTGG...CCCTGACTCCCATGCTGTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp ACAGTCCTGAACACCACACGCAATCTCCAAAGGCCATCGCCCCAACCTCACCCCGTCTTGTTGCTCAGCTaGATCTCCAGCTGCTGGGTC +
Preference number: 5 (lower is better)
Translates to: TVLNTTRNLQRPSPQPHPVLLLS*ISSCWV
Trigger: GACCCAGCAGCTGGAGATCAAGCTGAGCAACAAGAC...GGGGTGAGGTTGGGGCGATGGCCTTTGGAGATTGCGTGTGGTGTTCAGGACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CAA 90 bp AATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAATCACCAGTCCTCCTCTGTCTTGTaGCTCAGCTTGATCTCCAGC +
Preference number: 5 (lower is better)
Translates to: NMGEPPARLSGSPFWNHQSSSVL*LSLISS
Trigger: GCTGGAGATCAAGCTGAGCAACAAGACAGAGGAGGA...CTGGTGATTCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000579158.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp GGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGATCGACTGTGCTTTGGTaGAACATGTCTGTTTCATGC +
Preference number: 5 (lower is better)
Translates to: GLGIWGSPQLGCPGHPSGSTVLW*NMSVSC
Trigger: GCATGAAACAGACATGTTCAACCAAAGCACAGTCGA...TCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000396115.6
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp AGGGTTTGCCGATGTGCTCGTGTCTGTGAAGGGGTTGCTTCCGGTCATCTCCTTCGGATGTTGCCCGTCTaGTGCTCTCTGACCCACAGC +
Preference number: 5 (lower is better)
Translates to: RVCRCARVCEGVASGHLLRMLPV*CSLTHS
Trigger: GCTGTGGGTCAGAGAGCACAAGACGGGCAACATCCG...AAGGAGATGACCGGAAGCAACCCCTTCACAGACACGAGCACATCGGCAAACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CAA 90 bp GGAAGAGCCTTGGGGCTTCCAGGGCACAAGCATGTGACAGTGACCCCTACAAAACGGATGTTGCCCGTCTaGTGCTCTCTGACCCACAGC +
Preference number: 5 (lower is better)
Translates to: GRALGLPGHKHVTVTPTKRMLPV*CSLTHS
Trigger: GCTGTGGGTCAGAGAGCACAAGACGGGCAACATCCG...TTTTGTAGGGGTCACTGTCACATGCTTGTGCCCTGGAAGCCCCAAGGCTCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp TGCTGGCCTCTGAGACGAGCTGGTTTGTTTCCATCCCTGAAGCCTTTGGACGAGCGGATGTTGCCCGTCTaGTGCTCTCTGACCCACAGC +
Preference number: 5 (lower is better)
Translates to: CWPLRRAGLFPSLKPLDERMLPV*CSLTHS
Trigger: GCTGTGGGTCAGAGAGCACAAGACGGGCAACATCCG...CTCGTCCAAAGGCTTCAGGGATGGAAACAAACCAGCTCGTCTCAGAGGCCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp AATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAATCACCAGAGTTCCAGCCTCTGTTaGTTTCAGAGCGGCAAGCAC +
Preference number: 5 (lower is better)
Translates to: NMGEPPARLSGSPFWNHQSSSLC*FQSGKH
Trigger: GTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACT...CTGGTGATTCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp AAGGTGGCGGGACACTGCCTGAAAGGCGACAACCTAGTGTGGCCACAAGAGAGTCCATCCCTGAAGCCTTaGGACGAGCTGGATGAGGTC +
Preference number: 5 (lower is better)
Translates to: KVAGHCLKGDNLVWPQESPSLKP*DELDEV
Trigger: GACCTCATCCAGCTCGTCCAAAGGCTTCAGGGATGG...ACTCTCTTGTGGCCACACTAGGTTGTCGCCTTTCAGGCAGTGTCCCGCCACCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp GTGGAGGAAACACATTCATACCGGGGTGAGGAGTGCTGGCGGGAGACACGGCTCACACCAAGTAAGGGTTaGGTGCAGGGCTCTGGAATG +
Preference number: 5 (lower is better)
Translates to: VEETHSYRGEECWRETRLTPSKG*VQGSGM
Trigger: CATTCCAGAGCCCTGCACCAAACCCTTACTTGGTGT...GAGCCGTGTCTCCCGCCAGCACTCCTCACCCCGGTATGAATGTGTTTCCTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CAA 90 bp AAGGTGGCGGGACACTGCCTGAAAGGCGACAACCTAGTGTGGCCACAAGAGAGTATGGCTGGCGTCCCTTaGAATGTCTGTCCCTGGGTC +
Preference number: 5 (lower is better)
Translates to: KVAGHCLKGDNLVWPQESMAGVP*NVCPWV
Trigger: GACCCAGGGACAGACATTCAAAGGGACGCCAGCCAT...ACTCTCTTGTGGCCACACTAGGTTGTCGCCTTTCAGGCAGTGTCCCGCCACCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CAA 90 bp GATCCTGACACCTGGCTTAGAGACAGAGCCCTCCCTACCCTGATCCTCCAAAGCGGAAGGGATGCTAAGTaGGGGCCCCTGTCACTAAGG +
Preference number: 5 (lower is better)
Translates to: DPDTWLRDRALPTLILQSGRDAK*GPLSLR
Trigger: CCTTAGTGACAGGGGCCCCAACTTAGCATCCCTTCC...GCTTTGGAGGATCAGGGTAGGGAGGGCTCTGTCTCTAAGCCAGGTGTCAGGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS GCA 90 bp TGCCCTTCAGCTGTTTCTGGAGCAGTAGTTCAAACCCAGCCACGGTaGCGTTGCCTTGGGGGTCCTTCTTATCAGCCCAGAAGTAGTCGC +
Preference number: 5 (lower is better)
Translates to: CPSAVSGAVVQTQPR*RCLGGPSYQPRSSR
Trigger: GCGACTACTTCTGGGCTGATAAGAAGGACCCCCAAGGCAACGGCACCGTGGCTGGGTTTGAACTACTGCTCCAGAAACAGCTGAAGGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000579140.5
ENST00000579158.5
ENST00000580811.5
ENST00000580865.5
ENST00000581871.5
ENST00000584146.6
ENST00000585266.5
CDS GCA 90 bp GGCTCGACTGTGCTTTGGTTGAACATGTCTGTTTCATGCCGCAGCTaGGTGTACTGGCACAGGTGCTGCCGGATCATCTCTACCCTCTCC +
Preference number: 5 (lower is better)
Translates to: GSTVLWLNMSVSCRS*VYWHRCCRIISTLS
Trigger: GGAGAGGGTAGAGATGATCCGGCAGCACCTGTGCCAGTACACGCAGCTGCGGCATGAAACAGACATGTTCAACCAAAGCACAGTCGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000323816.8
ENST00000396115.6
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000578456.1
ENST00000579158.5
ENST00000580865.5
ENST00000581112.5
ENST00000585266.5
CDS-3UTR CAA 90 bp TGTCCAGAAGGAGCGGGAAGCAAAGGTGGCGGGACACTGCCTGAAAGGCGACAAGCTTCATGGCTCGTCTaGCGTTCAATCTTGGGGAGA +
Preference number: 5 (lower is better)
Translates to: CPEGAGSKGGGTLPERRQASWLV*RSILGR
Trigger: TCTCCCCAAGATTGAACGCAAGACGAGCCATGAAGC...TTGTCGCCTTTCAGGCAGTGTCCCGCCACCTTTGCTTCCCGCTCCTTCTGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323816.8
CDS-3UTR CAA 90 bp CAAAGACTTGCCCTAACCCATCTCACATGTAGGACTGACCCGGCCCCATTAAGACCAGCCACGGTGCCGTaGCCTTGGGGGTCCTTCTTA +
Preference number: 5 (lower is better)
Translates to: QRLALTHLTCRTDPAPLRPATVP*PWGSFL
Trigger: TAAGAAGGACCCCCAAGGCAACGGCACCGTGGCTGG...TCTTAATGGGGCCGGGTCAGTCCTACATGTGAGATGGGTTAGGGCAAGTCTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp GTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTCCAGCCACGGTGCCGTaGCCTTGGGGGTCCTTCTTA +
Preference number: 5 (lower is better)
Translates to: VTVTPTKLGKDHKVPASVPATVP*PWGSFL
Trigger: TAAGAAGGACCCCCAAGGCAACGGCACCGTGGCTGG...AACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp CATCTCACATGTAGGACTGACCCGGCCCCATTAAGAGCCTGTGGTGGGCGGCCCTCCTTCTGCATTTGTTaGCCCTTCAGCTGTTTCTGG +
Preference number: 5 (lower is better)
Translates to: HLTCRTDPAPLRACGGRPSFCIC*PFSCFW
Trigger: CCAGAAACAGCTGAAGGGCAAACAAATGCAGAAGGA...GGGCCGCCCACCACAGGCTCTTAATGGGGCCGGGTCAGTCCTACATGTGAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp GGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGAGACAAGGGCAGGGTCCTTCTGCATTTGTTaGCCCTTCAGCTGTTTCTGG +
Preference number: 5 (lower is better)
Translates to: GKHSMGVRGSSASETRAGSFCIC*PFSCFW
Trigger: CCAGAAACAGCTGAAGGGCAAACAAATGCAGAAGGA...CCCTGCCCTTGTCTCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp GGGCTCCCGACTAGAATCTGCCCCTCGCTCATGCTTCTCCCGGCCCCTTTAGACTCCTTCTGCATTTGTTaGCCCTTCAGCTGTTTCTGG +
Preference number: 5 (lower is better)
Translates to: GLPTRICPSLMLLPAPLDSFCIC*PFSCFW
Trigger: CCAGAAACAGCTGAAGGGCAAACAAATGCAGAAGGA...GTCTAAAGGGGCCGGGAGAAGCATGAGCGAGGGGCAGATTCTAGTCGGGAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR CAA 90 bp AATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAATCACCAGATGTCCTCCTCTGTCTaGTTGCTCAGCTTGATCTCC +
Preference number: 5 (lower is better)
Translates to: NMGEPPARLSGSPFWNHQMSSSV*LLSLIS
Trigger: GGAGATCAAGCTGAGCAACAAGACAGAGGAGGACAT...CTGGTGATTCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000579158.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp GTGGGTCTGTCTTCTGGGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCTCGACTGTGCTTTGGTaGAACATGTCTGTTTCATGC +
Preference number: 5 (lower is better)
Translates to: VGLSSGPGNMGEPPARLSSTVLW*NMSVSC
Trigger: GCATGAAACAGACATGTTCAACCAAAGCACAGTCGA...GGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCCCAGAAGACAGACCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000396115.6
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp AATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAATCACCAGGGGCTCGACTGTGCTTaGGTTGAACATGTCTGTTTC +
Preference number: 5 (lower is better)
Translates to: NMGEPPARLSGSPFWNHQGLDCA*VEHVCF
Trigger: GAAACAGACATGTTCAACCAAAGCACAGTCGAGCCC...CTGGTGATTCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000323816.8
ENST00000396115.6
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000579158.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp GTGGAGGAAACACATTCATACCGGGGTGAGGAGTGCTGGCGGGAGACACGGCTCGGGCTCGACTGTGCTTaGGTTGAACATGTCTGTTTC +
Preference number: 5 (lower is better)
Translates to: VEETHSYRGEECWRETRLGLDCA*VEHVCF
Trigger: GAAACAGACATGTTCAACCAAAGCACAGTCGAGCCC...GAGCCGTGTCTCCCGCCAGCACTCCTCACCCCGGTATGAATGTGTTTCCTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CAA 90 bp CCGACTAGAATCTGCCCCTCGCTCATGCTTCTCCCGGCCCCTTTAGACTCTTTACACAGCTCCCTGTCTTaGGCCGGGTCCACTTTTCGA +
Preference number: 5 (lower is better)
Translates to: PTRICPSLMLLPAPLDSLHSSLS*AGSTFR
Trigger: TCGAAAAGTGGACCCGGCCAAAGACAGGGAGCTGTG...TAAAGAGTCTAAAGGGGCCGGGAGAAGCATGAGCGAGGGGCAGATTCTAGTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR CAA 90 bp GACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAAGCACAGCATGGGAGTCCACAGGGCGGATGTaGCCCGTCTTGTGCTCTCTG +
Preference number: 5 (lower is better)
Translates to: DHKVPASVCFRAASTAWESTGRM*PVLCSL
Trigger: CAGAGAGCACAAGACGGGCAACATCCGCCCTGTGGA...CTCCCATGCTGTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp GACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGGCTGGAGGAAGAGCCTaGGGGCTTCCAGGGCACAAG +
Preference number: 5 (lower is better)
Translates to: DSDPYKTRQGPQSSSLCLAGGRA*GLPGHK
Trigger: CTTGTGCCCTGGAAGCCCCAAGGCTCTTCCTCCAGC...CAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000583882.5
ENST00000585266.5
CDS-3UTR CAA 90 bp CATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGCTGGAGGAAGAGCCTaGGGGCTTCCAGGGCACAAG +
Preference number: 5 (lower is better)
Translates to: HVTVTPTKLGKDHKVPASAGGRA*GLPGHK
Trigger: CTTGTGCCCTGGAAGCCCCAAGGCTCTTCCTCCAGC...AGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000583882.5
ENST00000585266.5
CDS-3UTR CAA 90 bp CATCTCACATGTAGGACTGACCCGGCCCCATTAAGAGCCTGTGGTGGGCGGCCCAGTGAGTTGTGCTTGTaGAATTCTGCCCTCACTGCA +
Preference number: 5 (lower is better)
Translates to: HLTCRTDPAPLRACGGRPSELCL*NSALTA
Trigger: TGCAGTGAGGGCAGAATTCAACAAGCACAACTCACT...GGGCCGCCCACCACAGGCTCTTAATGGGGCCGGGTCAGTCCTACATGTGAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR CAA 90 bp GAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGAGACAAGGGCTCGGTTTCTAGCACGTaGACTGAAAGACCAGTGAGT +
Preference number: 5 (lower is better)
Translates to: ERQAQHGSQGVFSLRDKGSVSST*TERPVS
Trigger: ACTCACTGGTCTTTCAGTCAACGTGCTAGAAACCGA...GCCCTTGTCTCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR CAA 90 bp CATCTCACATGTAGGACTGACCCGGCCCCATTAAGAGCCTGTGGTGGGCGGCCCTCGGTTTCTAGCACGTaGACTGAAAGACCAGTGAGT +
Preference number: 5 (lower is better)
Translates to: HLTCRTDPAPLRACGGRPSVSST*TERPVS
Trigger: ACTCACTGGTCTTTCAGTCAACGTGCTAGAAACCGA...GGGCCGCCCACCACAGGCTCTTAATGGGGCCGGGTCAGTCCTACATGTGAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR CAA 90 bp GGATTTCCAGGGCATGGGCTCCCGACTAGAATCTGCCCCTCGCTCATGCTTCTCAGGGGTTCTGGACTGTaGACTCTAGCCCTGGTCTTA +
Preference number: 5 (lower is better)
Translates to: GFPGHGLPTRICPSLMLLRGSGL*TLALVL
Trigger: TAAGACCAGGGCTAGAGTCAACAGTCCAGAACCCCT...GAGAAGCATGAGCGAGGGGCAGATTCTAGTCGGGAGCCCATGCCCTGGAAATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CAA 90 bp GTGGGTCTGTCTTCTGGGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCTTTCACAAACAGATCTaGTGCATCAGTCTCCTGGGT +
Preference number: 5 (lower is better)
Translates to: VGLSSGPGNMGEPPARLSFHKQI*CISLLG
Trigger: ACCCAGGAGACTGATGCACAAGATCTGTTTGTGAAA...GGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCCCAGAAGACAGACCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CAA 90 bp GGGGTGGTGCGGGGGCAGGTGGGTTACAGCCTCCACTGGGATCAGGGTTTCAACTTTCCAAAAGGGACTTaGGCTCAGCCCAGATTTTTC +
Preference number: 5 (lower is better)
Translates to: GVVRGQVGYSLHWDQGFNFPKGT*AQPRFF
Trigger: GAAAAATCTGGGCTGAGCCAAAGTCCCTTTTGGAAA...GTTGAAACCCTGATCCCAGTGGAGGCTGTAACCCACCTGCCCCCGCACCACCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CAA 90 bp ACAGTCCTGAACACCACACGCAATCTCCAAAGGCCATCGCCCCAACCTCACCCCGTGGGGAGAAGCGAATaGGTTTTTGCCCTCTGTCTG +
Preference number: 5 (lower is better)
Translates to: TVLNTTRNLQRPSPQPHPVGRSE*VFALCL
Trigger: CAGACAGAGGGCAAAAACCAATTCGCTTCTCCCCAC...GGGGTGAGGTTGGGGCGATGGCCTTTGGAGATTGCGTGTGGTGTTCAGGACTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CAA 90 bp TGTTTGTTTCAGAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAATGGCTGGCGTCCCTTaGAATGTCTGTCCCTGGGTC +
Preference number: 5 (lower is better)
Translates to: CLFQSGKHSMGVRGSSASMAGVP*NVCPWV
Trigger: GACCCAGGGACAGACATTCAAAGGGACGCCAGCCAT...TGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTCTGAAACAAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS TCA 90 bp TTGAAGTTCTCACGGAAGTTCATCAGGGGCTTCTCCACCTCGCTGTaGAGCTGTTGGGAGAGTAGAGACGCACACTCAGGACCCAGGGCA +
Preference number: 5 (lower is better)
Translates to: LKFSRKFIRGFSTSL*SCWESRDAHSGPRA
Trigger: TGCCCTGGGTCCTGAGTGTGCGTCTCTACTCTCCCAACAGCTTCACAGCGAGGTGGAGAAGCCCCTGATGAACTTCCGTGAGAACTTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578456.1
CDS GCA 90 bp TCAGCTGTTTCTGGAGCAGTAGTTCAAACCCAGCCACGGTGCCGTTaGCTTGGGGGTCCTTCTTATCAGCCCAGAAGTAGTCGCAGTAGC +
Preference number: 5 (lower is better)
Translates to: SAVSGAVVQTQPRCR*LGGPSYQPRSSRSS
Trigger: GCTACTGCGACTACTTCTGGGCTGATAAGAAGGACCCCCAAGGCAACGGCACCGTGGCTGGGTTTGAACTACTGCTCCAGAAACAGCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000579140.5
ENST00000579158.5
ENST00000580811.5
ENST00000580865.5
ENST00000581871.5
ENST00000584146.6
ENST00000585266.5
CDS GCA 90 bp ACCATTCCAGGCTTCATCAGAGAACAGCTAACCTTCTCTGGGGGCTaGTACCTCAGAGGAGAGTCTTGGGTCCTGCCTGAAGCCCTCAGA +
Preference number: 5 (lower is better)
Translates to: TIPGFIREQLTFSGG*YLRGESWVLPEALR
Trigger: TCTGAGGGCTTCAGGCAGGACCCAAGACTCTCCTCTGAGGTAGCAGCCCCCAGAGAAGGTTAGCTGTTCTCTGATGAAGCCTGGAATGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000578655.1
ENST00000585266.5
CDS GCA 90 bp TTCAGAGACTTGGCCATCAGAGAACAGCTAACCTTCTCTGGGGGCTaGTACCTCAGAGGAGAGTCTTGGGTCCTGCCTGAAGCCCTCAGA +
Preference number: 5 (lower is better)
Translates to: FRDLAIREQLTFSGG*YLRGESWVLPEALR
Trigger: TCTGAGGGCTTCAGGCAGGACCCAAGACTCTCCTCTGAGGTAGCAGCCCCCAGAGAAGGTTAGCTGTTCTCTGATGGCCAAGTCTCTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584146.6
CDS CCA 90 bp GTCCTTCTTATCAGCCCAGAAGTAGTCGCAGTAGCTCCACTCGGTTaGTTTCAGCAGCTGCTGTTCCGGCATCGTGTCTGGGTGAGGGAA +
Preference number: 5 (lower is better)
Translates to: VLLISPEVVAVAPLG*FQQLLFRHRVWVRE
Trigger: TTCCCTCACCCAGACACGATGCCGGAACAGCAGCTGCTGAAACCAACCGAGTGGAGCTACTGCGACTACTTCTGGGCTGATAAGAAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000578655.1
ENST00000579140.5
ENST00000579158.5
ENST00000580811.5
ENST00000580865.5
ENST00000581871.5
ENST00000584146.6
ENST00000585266.5
CDS CCA 90 bp GCTAGCCCAGGGCCAGTGTTCTGGGCACCCCAGCGGAGGTTCCTGTaGCTTTGCTCATTGCTGTTCTTTCACAAAGAACCCACTACATTG +
Preference number: 5 (lower is better)
Translates to: ASPGPVFWAPQRRFL*LCSLLFFHKEPTTL
Trigger: CAATGTAGTGGGTTCTTTGTGAAAGAACAGCAATGAGCAAAGCCACAGGAACCTCCGCTGGGGTGCCCAGAACACTGGCCCTGGGCTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579140.5
ENST00000585266.5
CDS CCA 90 bp CACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAAGCACAGCATaGGAGTCAGGGGGTCTTCAGCCCAGAAGTAGTCGCAGTAGCTCC +
Preference number: 5 (lower is better)
Translates to: HKVPASVCFRAASTA*ESGGLQPRSSRSSS
Trigger: GGAGCTACTGCGACTACTTCTGGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583882.5
CDS-3UTR CAA 90 bp TGTTTCAGAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGAGAAGTAGCTCCACTCGGTaGGTTTCAGCAGCTGCTGTT +
Preference number: 5 (lower is better)
Translates to: CFRAASTAWESGGLQPQRSSSTR*VSAAAV
Trigger: AACAGCAGCTGCTGAAACCAACCGAGTGGAGCTACT...TCTCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTCTGAAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp AGGGCACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTCACGGTGCCGTTGCCTaGGGGGTCCTTCTTATCAGC +
Preference number: 5 (lower is better)
Translates to: RAQACDSDPYKTRQGPQSHGAVA*GVLLIS
Trigger: GCTGATAAGAAGGACCCCCAAGGCAACGGCACCGTG...ACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTGCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp GTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTCACGGTGCCGTTGCCTaGGGGGTCCTTCTTATCAGC +
Preference number: 5 (lower is better)
Translates to: VTVTPTKLGKDHKVPASVHGAVA*GVLLIS
Trigger: GCTGATAAGAAGGACCCCCAAGGCAACGGCACCGTG...AACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp CACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCACCAGCCACGGTGCCGTaGCCTTGGGGGTCCTTCTTA +
Preference number: 5 (lower is better)
Translates to: HKHVTVTPTKLGKDHKVPPATVP*PWGSFL
Trigger: TAAGAAGGACCCCCAAGGCAACGGCACCGTGGCTGG...TGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp CAGAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGAGACAAGGTCCTTCTGCATTTGTTaGCCCTTCAGCTGTTTCTGG +
Preference number: 5 (lower is better)
Translates to: QSGKHSMGVRGSSASETRSFCIC*PFSCFW
Trigger: CCAGAAACAGCTGAAGGGCAAACAAATGCAGAAGGA...CCTTGTCTCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp AATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAATCACCAGTCCTTCTGCATTTGTTaGCCCTTCAGCTGTTTCTGG +
Preference number: 5 (lower is better)
Translates to: NMGEPPARLSGSPFWNHQSFCIC*PFSCFW
Trigger: CCAGAAACAGCTGAAGGGCAAACAAATGCAGAAGGA...CTGGTGATTCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000579158.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp TGCTGGCCTCTGAGACGAGCTGGTTTGTTTCCATCCCTGAAGCCTTTGGACGAGGTCTTGTTGCTCAGCTaGATCTCCAGCTGCTGGGTC +
Preference number: 5 (lower is better)
Translates to: CWPLRRAGLFPSLKPLDEVLLLS*ISSCWV
Trigger: GACCCAGCAGCTGGAGATCAAGCTGAGCAACAAGAC...CTCGTCCAAAGGCTTCAGGGATGGAAACAAACCAGCTCGTCTCAGAGGCCAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp CGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAAGCACAGCGTCTTGTTGCTCAGCTaGATCTCCAGCTGCTGGGTC +
Preference number: 5 (lower is better)
Translates to: RQGPQSSSLCLFQSGKHSVLLLS*ISSCWV
Trigger: GACCCAGCAGCTGGAGATCAAGCTGAGCAACAAGAC...GCTGTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp TGTCCAGAAGGAGCGGGAAGCAAAGGTGGCGGGACACTGCCTGAAAGGCGACAAATGTCCTCCTCTGTCTaGTTGCTCAGCTTGATCTCC +
Preference number: 5 (lower is better)
Translates to: CPEGAGSKGGGTLPERRQMSSSV*LLSLIS
Trigger: GGAGATCAAGCTGAGCAACAAGACAGAGGAGGACAT...TTGTCGCCTTTCAGGCAGTGTCCCGCCACCTTTGCTTCCCGCTCCTTCTGGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp GGGCTCCCGACTAGAATCTGCCCCTCGCTCATGCTTCTCCCGGCCCCTTTAGACTCGACTGTGCTTTGGTaGAACATGTCTGTTTCATGC +
Preference number: 5 (lower is better)
Translates to: GLPTRICPSLMLLPAPLDSTVLW*NMSVSC
Trigger: GCATGAAACAGACATGTTCAACCAAAGCACAGTCGA...GTCTAAAGGGGCCGGGAGAAGCATGAGCGAGGGGCAGATTCTAGTCGGGAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR CAA 90 bp AATGTCCAGAAGGAGCGGGAAGCAAAGGTGGCGGGACACTGCCTGAAAGGCGACGGGCTCGACTGTGCTTaGGTTGAACATGTCTGTTTC +
Preference number: 5 (lower is better)
Translates to: NVQKEREAKVAGHCLKGDGLDCA*VEHVCF
Trigger: GAAACAGACATGTTCAACCAAAGCACAGTCGAGCCC...GTCGCCTTTCAGGCAGTGTCCCGCCACCTTTGCTTCCCGCTCCTTCTGGACATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp GACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAAGCACAGCATGGGAGCACAGCTCCCTGTCTTaGGCCGGGTCCACTTTTCGA +
Preference number: 5 (lower is better)
Translates to: DHKVPASVCFRAASTAWEHSSLS*AGSTFR
Trigger: TCGAAAAGTGGACCCGGCCAAAGACAGGGAGCTGTG...CTCCCATGCTGTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp GTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTCGGATGTTGCCCGTCTaGTGCTCTCTGACCCACAGC +
Preference number: 5 (lower is better)
Translates to: VTVTPTKLGKDHKVPASVRMLPV*CSLTHS
Trigger: GCTGTGGGTCAGAGAGCACAAGACGGGCAACATCCG...AACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp AGGGCACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTCGGATGTTGCCCGTCTaGTGCTCTCTGACCCACAGC +
Preference number: 5 (lower is better)
Translates to: RAQACDSDPYKTRQGPQSRMLPV*CSLTHS
Trigger: GCTGTGGGTCAGAGAGCACAAGACGGGCAACATCCG...ACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp TGGGGGAAGGATGGATTGGCATTTCCAGAGGAGACTTTACAGATGGCGCCTGATTCCACAGGGCGGATGTaGCCCGTCTTGTGCTCTCTG +
Preference number: 5 (lower is better)
Translates to: WGKDGLAFPEETLQMAPDSTGRM*PVLCSL
Trigger: CAGAGAGCACAAGACGGGCAACATCCGCCCTGTGGA...ATCAGGCGCCATCTGTAAAGTCTCCTCTGGAAATGCCAATCCATCCTTCCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp CATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTTCCACAGGGCGGATGTaGCCCGTCTTGTGCTCTCTG +
Preference number: 5 (lower is better)
Translates to: HVTVTPTKLGKDHKVPASSTGRM*PVLCSL
Trigger: CAGAGAGCACAAGACGGGCAACATCCGCCCTGTGGA...AGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp ATGGATTTCCAGGGCATGGGCTCCCGACTAGAATCTGCCCCTCGCTCATGCTTCAGTTCCAGCCTCTGTTaGTTTCAGAGCGGCAAGCAC +
Preference number: 5 (lower is better)
Translates to: MDFQGMGSRLESAPRSCFSSSLC*FQSGKH
Trigger: GTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACT...GAAGCATGAGCGAGGGGCAGATTCTAGTCGGGAGCCCATGCCCTGGAAATCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR CAA 90 bp GGGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGATTGGCTTTGAATGTTaGGAAATCATCCACAGAGTA +
Preference number: 5 (lower is better)
Translates to: GPGNMGEPPARLSGSPFWIGFEC*EIIHRV
Trigger: TACTCTGTGGATGATTTCCAAACATTCAAAGCCAAT...CCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR CAA 90 bp GGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGAGACAAGGGCAGGGAGTTGCATCCTAACCTaGATTTCAACCAGAAACGGG +
Preference number: 5 (lower is better)
Translates to: GKHSMGVRGSSASETRAGSCILT*ISTRNG
Trigger: CCCGTTTCTGGTTGAAATCAAGGTTAGGATGCAACT...CCCTGCCCTTGTCTCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CAA 90 bp TCCAGGGCACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAACCCGGATAGCGTGCTaGCCTCTCCAAAGTGCAGTC +
Preference number: 5 (lower is better)
Translates to: SRAQACDSDPYKTRQGPQTRIAC*PLQSAV
Trigger: GACTGCACTTTGGAGAGGCAAGCACGCTATCCGGGT...TTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTGCCCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CAA 90 bp TGTTTCAGAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGAGACAAGGGGCCTATGTGTaGCCACTGACTGAAAGCACT +
Preference number: 5 (lower is better)
Translates to: CFRAASTAWESGGLQPQRQGAYV*PLTEST
Trigger: AGTGCTTTCAGTCAGTGGCAACACATAGGCCCCTTG...TCTCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTCTGAAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CAA 90 bp TTTGTTTCAGAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGACCGCAGAAATTCTCCTaGGCCAACAGGGTGCTGAGT +
Preference number: 5 (lower is better)
Translates to: FVSERQAQHGSQGVFSLRPQKFS*ANRVLS
Trigger: ACTCAGCACCCTGTTGGCCAAGGAGAATTTCTGCGG...TCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTCTGAAACAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CAA 90 bp CAGAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGAGACAAGGGAAAGAAACCCCTGGTaGGTGAATTCGTTGGTACAC +
Preference number: 5 (lower is better)
Translates to: QSGKHSMGVRGSSASETRERNPW*VNSLVH
Trigger: GTGTACCAACGAATTCACCAACCAGGGGTTTCTTTC...CCTTGTCTCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CAA 90 bp CAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCCAGCCCCAGCCTTCTaGTCCATGCTGCTTCTGCTC +
Preference number: 5 (lower is better)
Translates to: QACDSDPYKTRQGPQSSSPAPAF*SMLLLL
Trigger: GAGCAGAAGCAGCATGGACAAGAAGGCTGGGGCTGG...GCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CAA 90 bp AGGGCACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTCCAGCCCCAGCCTTCTaGTCCATGCTGCTTCTGCTC +
Preference number: 5 (lower is better)
Translates to: RAQACDSDPYKTRQGPQSPAPAF*SMLLLL
Trigger: GAGCAGAAGCAGCATGGACAAGAAGGCTGGGGCTGG...ACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS TCA 90 bp CACTCGGTTGGTTTCAGCAGCTGCTGTTCCGGCATCGTGTCTGGGTaGGGGAACGTCACACAGTTTATCTTCCCCTCCTGCCCTGAAAAA +
Preference number: 5 (lower is better)
Translates to: HSVGFSSCCSGIVSG*GNVTQFIFPSCPEK
Trigger: TTTTTCAGGGCAGGAGGGGAAGATAAACTGTGTGACGTTCCCTCACCCAGACACGATGCCGGAACAGCAGCTGCTGAAACCAACCGAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581871.5
CDS GCA 90 bp TTCTTGATGTCCTCCTCTGTCTTGTTGCTCAGCTTGATCTCCAGCTaGTGGGTCTTCATCTCCAGGTCTCTCTGCCGCTCTGTGAGGGCT +
Preference number: 5 (lower is better)
Translates to: FLMSSSVLLLSLISS*WVFISRSLCRSVRA
Trigger: AGCCCTCACAGAGCGGCAGAGAGACCTGGAGATGAAGACCCAGCAGCTGGAGATCAAGCTGAGCAACAAGACAGAGGAGGACATCAAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000578456.1
ENST00000579158.5
ENST00000580865.5
ENST00000585266.5
CDS GCA 90 bp TCCACCTCCAGCCGCTCTAGCTCTGTGATGGTGTTTTCCTTGCTCTaGTTTTTGCTTGGCGATGAGGATCCCAGGTTCTGGGAATCACCG +
Preference number: 5 (lower is better)
Translates to: STSSRSSSVMVFSLL*FLLGDEDPRFWESP
Trigger: CGGTGATTCCCAGAACCTGGGATCCTCATCGCCAAGCAAAAAGCAGAGCAAGGAAAACACCATCACAGAGCTAGAGCGGCTGGAGGTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396115.6
CDS CCA 90 bp TTGATGTCCTCCTCTGTCTTGTTGCTCAGCTTGATCTCCAGCTGCTaGGTCTTCATCTCCAGGTCTCTCTGCCGCTCTGTGAGGGCTTTC +
Preference number: 5 (lower is better)
Translates to: LMSSSVLLLSLISSC*VFISRSLCRSVRAF
Trigger: GAAAGCCCTCACAGAGCGGCAGAGAGACCTGGAGATGAAGACCCAGCAGCTGGAGATCAAGCTGAGCAACAAGACAGAGGAGGACATCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000578456.1
ENST00000579158.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp TGTTTGTTTCAGAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCATGCTCTGCTTTTTGCTaGGCGATGAGGATCCCAGGT +
Preference number: 5 (lower is better)
Translates to: CLFQSGKHSMGVRGSSASCSAFC*AMRIPG
Trigger: ACCTGGGATCCTCATCGCCAAGCAAAAAGCAGAGCA...TGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTCTGAAACAAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp AGGGTTTGCCGATGTGCTCGTGTCTGTGAAGGGGTTGCTTCCGGTCATCTCCTTTCCTTGCTCTGCTTTTaGCTTGGCGATGAGGATCCC +
Preference number: 5 (lower is better)
Translates to: RVCRCARVCEGVASGHLLSLLCF*LGDEDP
Trigger: GGGATCCTCATCGCCAAGCAAAAAGCAGAGCAAGGA...AAGGAGATGACCGGAAGCAACCCCTTCACAGACACGAGCACATCGGCAAACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CAA 90 bp GGAAGAGCCTTGGGGCTTCCAGGGCACAAGCATGTGACAGTGACCCCTACAAAATCCTTGCTCTGCTTTTaGCTTGGCGATGAGGATCCC +
Preference number: 5 (lower is better)
Translates to: GRALGLPGHKHVTVTPTKSLLCF*LGDEDP
Trigger: GGGATCCTCATCGCCAAGCAAAAAGCAGAGCAAGGA...TTTTGTAGGGGTCACTGTCACATGCTTGTGCCCTGGAAGCCCCAAGGCTCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000583882.5
ENST00000585266.5
CDS-3UTR CAA 90 bp ACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCACACGGTGCCGTTGCCTaGGGGGTCCTTCTTATCAGC +
Preference number: 5 (lower is better)
Translates to: TKLGKDHKVPASVCFRAAHGAVA*GVLLIS
Trigger: GCTGATAAGAAGGACCCCCAAGGCAACGGCACCGTG...TGCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp ACCAGTGAGTTGTGCTTGTTGAATTCTGCCCTCACTGCAGATGTGCAGGTCAAACCAGCCACGGTGCCGTaGCCTTGGGGGTCCTTCTTA +
Preference number: 5 (lower is better)
Translates to: TSELCLLNSALTADVQVKPATVP*PWGSFL
Trigger: TAAGAAGGACCCCCAAGGCAACGGCACCGTGGCTGG...TTTGACCTGCACATCTGCAGTGAGGGCAGAATTCAACAAGCACAACTCACTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR CAA 90 bp GCCAAGGTCGCTGATGTCCTTCGAATGTTATGGCTTGTATTTCCAAAAGGGACTCGGCTGGCGAGCTGCTaGCGAAGGTCGGCAATGTGG +
Preference number: 5 (lower is better)
Translates to: AKVADVLRMLWLVFPKGTRLASC*RRSAMW
Trigger: CCACATTGCCGACCTTCGCAAGCAGCTCGCCAGCCG...AGTCCCTTTTGGAAATACAAGCCATAACATTCGAAGGACATCAGCGACCTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CAA 90 bp GCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCGTCTTGTTGCTCAGCTaGATCTCCAGCTGCTGGGTC +
Preference number: 5 (lower is better)
Translates to: ACDSDPYKTRQGPQSSSLVLLLS*ISSCWV
Trigger: GACCCAGCAGCTGGAGATCAAGCTGAGCAACAAGAC...GAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp TTTGTTTCAGAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGATCCTCCTCTGTCTTGTaGCTCAGCTTGATCTCCAGC +
Preference number: 5 (lower is better)
Translates to: FVSERQAQHGSQGVFSLRSSSVL*LSLISS
Trigger: GCTGGAGATCAAGCTGAGCAACAAGACAGAGGAGGA...TCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTCTGAAACAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp AATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAATCACCAGTCGACTGTGCTTTGGTaGAACATGTCTGTTTCATGC +
Preference number: 5 (lower is better)
Translates to: NMGEPPARLSGSPFWNHQSTVLW*NMSVSC
Trigger: GCATGAAACAGACATGTTCAACCAAAGCACAGTCGA...CTGGTGATTCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000323816.8
ENST00000396115.6
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000579158.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp GCACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCCACAGCTCCCTGTCTTaGGCCGGGTCCACTTTTCGA +
Preference number: 5 (lower is better)
Translates to: AQACDSDPYKTRQGPQSSHSSLS*AGSTFR
Trigger: TCGAAAAGTGGACCCGGCCAAAGACAGGGAGCTGTG...GGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp GGAAGAGCCTTGGGGCTTCCAGGGCACAAGCATGTGACAGTGACCCCTACAAAAAGTTCCAGCCTCTGTTaGTTTCAGAGCGGCAAGCAC +
Preference number: 5 (lower is better)
Translates to: GRALGLPGHKHVTVTPTKSSSLC*FQSGKH
Trigger: GTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACT...TTTTGTAGGGGTCACTGTCACATGCTTGTGCCCTGGAAGCCCCAAGGCTCTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000583882.5
ENST00000585266.5
CDS-3UTR CAA 90 bp AATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAATCACCAGCAATTTGGGGCTAATTaGCCGAATGAGGTAGTTCCA +
Preference number: 5 (lower is better)
Translates to: NMGEPPARLSGSPFWNHQQFGAN*PNEVVP
Trigger: TGGAACTACCTCATTCGGCAAATTAGCCCCAAATTG...CTGGTGATTCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp GACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGCCATCCCTGAAGCCTTaGGACGAGCTGGATGAGGTC +
Preference number: 5 (lower is better)
Translates to: DSDPYKTRQGPQSSSLCLPSLKP*DELDEV
Trigger: GACCTCATCCAGCTCGTCCAAAGGCTTCAGGGATGG...CAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp GCTTCCAGGGCACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCAACACCAAGTAAGGGTTaGGTGCAGGGCTCTGGAATG +
Preference number: 5 (lower is better)
Translates to: ASRAQACDSDPYKTRQGPTPSKG*VQGSGM
Trigger: CATTCCAGAGCCCTGCACCAAACCCTTACTTGGTGT...TGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTGCCCTGGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp GGAAGAGCCTTGGGGCTTCCAGGGCACAAGCATGTGACAGTGACCCCTACAAAAGTATCAATGCCAAGGTaGCTGACCGGTAAGACCCCT +
Preference number: 5 (lower is better)
Translates to: GRALGLPGHKHVTVTPTKVSMPR*LTGKTP
Trigger: AGGGGTCTTACCGGTCAGCAACCTTGGCATTGATAC...TTTTGTAGGGGTCACTGTCACATGCTTGTGCCCTGGAAGCCCCAAGGCTCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CAA 90 bp TTTGTTTCAGAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGAGTATCAATGCCAAGGTaGCTGACCGGTAAGACCCCT +
Preference number: 5 (lower is better)
Translates to: FVSERQAQHGSQGVFSLRVSMPR*LTGKTP
Trigger: AGGGGTCTTACCGGTCAGCAACCTTGGCATTGATAC...TCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTCTGAAACAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CAA 90 bp CAGAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGAGACAAGGAGTTGCATCCTAACCTaGATTTCAACCAGAAACGGG +
Preference number: 5 (lower is better)
Translates to: QSGKHSMGVRGSSASETRSCILT*ISTRNG
Trigger: CCCGTTTCTGGTTGAAATCAAGGTTAGGATGCAACT...CCTTGTCTCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CAA 90 bp GCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAAGCACAGCATACCCGGATAGCGTGCTaGCCTCTCCAAAGTGCAGTC +
Preference number: 5 (lower is better)
Translates to: ARTTKFQPLFVSERQAQHTRIAC*PLQSAV
Trigger: GACTGCACTTTGGAGAGGCAAGCACGCTATCCGGGT...ATGCTGTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CAA 90 bp CCGACTAGAATCTGCCCCTCGCTCATGCTTCTCCCGGCCCCTTTAGACTCTTTACAAGGGGCCTATGTGTaGCCACTGACTGAAAGCACT +
Preference number: 5 (lower is better)
Translates to: PTRICPSLMLLPAPLDSLQGAYV*PLTEST
Trigger: AGTGCTTTCAGTCAGTGGCAACACATAGGCCCCTTG...TAAAGAGTCTAAAGGGGCCGGGAGAAGCATGAGCGAGGGGCAGATTCTAGTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CAA 90 bp AATGTCCAGAAGGAGCGGGAAGCAAAGGTGGCGGGACACTGCCTGAAAGGCGACTGGTTGGTGAATTCGTaGGTACACTGTTTCGGTGTG +
Preference number: 5 (lower is better)
Translates to: NVQKEREAKVAGHCLKGDWLVNS*VHCFGV
Trigger: CACACCGAAACAGTGTACCAACGAATTCACCAACCA...GTCGCCTTTCAGGCAGTGTCCCGCCACCTTTGCTTCCCGCTCCTTCTGGACATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CAA 90 bp TGTCCAGAAGGAGCGGGAAGCAAAGGTGGCGGGACACTGCCTGAAAGGCGACAAGAAAGAAACCCCTGGTaGGTGAATTCGTTGGTACAC +
Preference number: 5 (lower is better)
Translates to: CPEGAGSKGGGTLPERRQERNPW*VNSLVH
Trigger: GTGTACCAACGAATTCACCAACCAGGGGTTTCTTTC...TTGTCGCCTTTCAGGCAGTGTCCCGCCACCTTTGCTTCCCGCTCCTTCTGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CAA 90 bp CCGACTAGAATCTGCCCCTCGCTCATGCTTCTCCCGGCCCCTTTAGACTCTTTAAGCCCTAAGAACAGCTaGTGGGCACAGCTGGCATTT +
Preference number: 5 (lower is better)
Translates to: PTRICPSLMLLPAPLDSLSPKNS*WAQLAF
Trigger: AAATGCCAGCTGTGCCCACAAGCTGTTCTTAGGGCT...TAAAGAGTCTAAAGGGGCCGGGAGAAGCATGAGCGAGGGGCAGATTCTAGTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CAA 90 bp CGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAAGCACAGCAGCCCTAAGAACAGCTaGTGGGCACAGCTGGCATTT +
Preference number: 5 (lower is better)
Translates to: RQGPQSSSLCLFQSGKHSSPKNS*WAQLAF
Trigger: AAATGCCAGCTGTGCCCACAAGCTGTTCTTAGGGCT...GCTGTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CAA 90 bp CTGAGACGAGCTGGTTTGTTTCCATCCCTGAAGCCTTTGGACGAGCTGGATGAGAGACGTGAGCAGCAATaGAGCACCCATCCGTCCCTT +
Preference number: 5 (lower is better)
Translates to: LRRAGLFPSLKPLDELDERREQQ*STHPSL
Trigger: AAGGGACGGATGGGTGCTCAATTGCTGCTCACGTCT...CTCATCCAGCTCGTCCAAAGGCTTCAGGGATGGAAACAAACCAGCTCGTCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CAA 90 bp TGCTGGCCTCTGAGACGAGCTGGTTTGTTTCCATCCCTGAAGCCTTTGGACGAGGTGGGGAGAAGCGAATaGGTTTTTGCCCTCTGTCTG +
Preference number: 5 (lower is better)
Translates to: CWPLRRAGLFPSLKPLDEVGRSE*VFALCL
Trigger: CAGACAGAGGGCAAAAACCAATTCGCTTCTCCCCAC...CTCGTCCAAAGGCTTCAGGGATGGAAACAAACCAGCTCGTCTCAGAGGCCAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CAA 90 bp GAAAACTGTACAAGGGACAGCAGTCCCAGCCCTGCCATACACAAGAAGACAGAGGGAAGGGATGCTAAGTaGGGGCCCCTGTCACTAAGG +
Preference number: 5 (lower is better)
Translates to: ENCTRDSSPSPAIHKKTEGRDAK*GPLSLR
Trigger: CCTTAGTGACAGGGGCCCCAACTTAGCATCCCTTCC...CTCTGTCTTCTTGTGTATGGCAGGGCTGGGACTGCTGTCCCTTGTACAGTTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS GCA 90 bp GTCACACAGTTTATCATCAGAGAACAGCTAACCTTCTCTGGGGGCTaGTACCTCAGAGGAGAGTCTTGGGTCCTGCCTGAAGCCCTCAGA +
Preference number: 5 (lower is better)
Translates to: VTQFIIREQLTFSGG*YLRGESWVLPEALR
Trigger: TCTGAGGGCTTCAGGCAGGACCCAAGACTCTCCTCTGAGGTAGCAGCCCCCAGAGAAGGTTAGCTGTTCTCTGATGATAAACTGTGTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579140.5
CDS CCA 90 bp GCTCCACTCGGTTGGTTTCAGCAGCTGCTGTTCCGGCATCGTGTCTaGGTGAGGGAACGTCACACAGTTTATCATCAGAGAACAGCTAAC +
Preference number: 5 (lower is better)
Translates to: APLGWFQQLLFRHRV*VRERHTVYHQRTAN
Trigger: GTTAGCTGTTCTCTGATGATAAACTGTGTGACGTTCCCTCACCCAGACACGATGCCGGAACAGCAGCTGCTGAAACCAACCGAGTGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579140.5
CDS-3UTR CAA 90 bp GCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGCTCTGCTTTTTGCTaGGCGATGAGGATCCCAGGT +
Preference number: 5 (lower is better)
Translates to: ACDSDPYKTRQGPQSSSLCSAFC*AMRIPG
Trigger: ACCTGGGATCCTCATCGCCAAGCAAAAAGCAGAGCA...GAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000583882.5
ENST00000585266.5
CDS-3UTR CAA 90 bp TACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCCACAGCTCCCTGTCTTaGGCCGGGTCCACTTTTCGA +
Preference number: 5 (lower is better)
Translates to: YKTRQGPQSSSLCLFQSGHSSLS*AGSTFR
Trigger: TCGAAAAGTGGACCCGGCCAAAGACAGGGAGCTGTG...GCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp CCAAACAGCAGCACTGAAAGCTTCCCAAGTCACACTCAGACCAGACTTTTCCAGCCATCCCTGAAGCCTTaGGACGAGCTGGATGAGGTC +
Preference number: 5 (lower is better)
Translates to: PNSSTESFPSHTQTRLFQPSLKP*DELDEV
Trigger: GACCTCATCCAGCTCGTCCAAAGGCTTCAGGGATGG...CTGGAAAAGTCTGGTCTGAGTGTGACTTGGGAAGCTTTCAGTGCTGCTGTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR CAA 90 bp TCCAGGGCACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAACACCAAGTAAGGGTTaGGTGCAGGGCTCTGGAATG +
Preference number: 5 (lower is better)
Translates to: SRAQACDSDPYKTRQGPQTPSKG*VQGSGM
Trigger: CATTCCAGAGCCCTGCACCAAACCCTTACTTGGTGT...TTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTGCCCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp ATGGATTTCCAGGGCATGGGCTCCCGACTAGAATCTGCCCCTCGCTCATGCTTCTCGGTTTCTAGCACGTaGACTGAAAGACCAGTGAGT +
Preference number: 5 (lower is better)
Translates to: MDFQGMGSRLESAPRSCFSVSST*TERPVS
Trigger: ACTCACTGGTCTTTCAGTCAACGTGCTAGAAACCGA...GAAGCATGAGCGAGGGGCAGATTCTAGTCGGGAGCCCATGCCCTGGAAATCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR CAA 90 bp GTGGGTCTGTCTTCTGGGCCTGGGAATATGGGGGAGCCCCCAGCTAGGCTGTCCATTGGCTTTGAATGTTaGGAAATCATCCACAGAGTA +
Preference number: 5 (lower is better)
Translates to: VGLSSGPGNMGEPPARLSIGFEC*EIIHRV
Trigger: TACTCTGTGGATGATTTCCAAACATTCAAAGCCAAT...GGACAGCCTAGCTGGGGGCTCCCCCATATTCCCAGGCCCAGAAGACAGACCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR CAA 90 bp TGCTGGCCTCTGAGACGAGCTGGTTTGTTTCCATCCCTGAAGCCTTTGGACGAGGTAGAAGGGGCTGACTaGTTCTCAGAAATGGAAGGG +
Preference number: 5 (lower is better)
Translates to: CWPLRRAGLFPSLKPLDEVEGAD*FSEMEG
Trigger: CCCTTCCATTTCTGAGAACAAGTCAGCCCCTTCTAC...CTCGTCCAAAGGCTTCAGGGATGGAAACAAACCAGCTCGTCTCAGAGGCCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CAA 90 bp CAAAGACTTGCCCTAACCCATCTCACATGTAGGACTGACCCGGCCCCATTAAGAGGCTCTTCCTGGAGGTaGTCACAGCAACCAACTTGG +
Preference number: 5 (lower is better)
Translates to: QRLALTHLTCRTDPAPLRGSSWR*SQQPTW
Trigger: CCAAGTTGGTTGCTGTGACAACCTCCAGGAAGAGCC...TCTTAATGGGGCCGGGTCAGTCCTACATGTGAGATGGGTTAGGGCAAGTCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CAA 90 bp GTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTCCGCAGAAATTCTCCTaGGCCAACAGGGTGCTGAGT +
Preference number: 5 (lower is better)
Translates to: VTVTPTKLGKDHKVPASVPQKFS*ANRVLS
Trigger: ACTCAGCACCCTGTTGGCCAAGGAGAATTTCTGCGG...AACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CAA 90 bp GATCCTGACACCTGGCTTAGAGACAGAGCCCTCCCTACCCTGATCCTCCAAAGCGAAAGAAACCCCTGGTaGGTGAATTCGTTGGTACAC +
Preference number: 5 (lower is better)
Translates to: DPDTWLRDRALPTLILQSERNPW*VNSLVH
Trigger: GTGTACCAACGAATTCACCAACCAGGGGTTTCTTTC...GCTTTGGAGGATCAGGGTAGGGAGGGCTCTGTCTCTAAGCCAGGTGTCAGGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CAA 90 bp GGATCCAGAAATGTCTCTGGTTCGCATAGAGAGGTACCCAACTGGTCTCGGGACGGTCGTGCAAACAAGTaGAAGACCCTGGGCCAAGAA +
Preference number: 5 (lower is better)
Translates to: GSRNVSGSHREVPNWSRDGRANK*KTLGQE
Trigger: TTCTTGGCCCAGGGTCTTCAACTTGTTTGCACGACC...GTCCCGAGACCAGTTGGGTACCTCTCTATGCGAACCAGAGACATTTCTGGATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CAA 90 bp CATGATTCTGATCCTGACACCTGGCTTAGAGACAGAGCCCTCCCTACCCTGATCGGTCGTGCAAACAAGTaGAAGACCCTGGGCCAAGAA +
Preference number: 5 (lower is better)
Translates to: HDSDPDTWLRDRALPTLIGRANK*KTLGQE
Trigger: TTCTTGGCCCAGGGTCTTCAACTTGTTTGCACGACC...GATCAGGGTAGGGAGGGCTCTGTCTCTAAGCCAGGTGTCAGGATCAGAATCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CAA 90 bp CATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTAGACGTGAGCAGCAATaGAGCACCCATCCGTCCCTT +
Preference number: 5 (lower is better)
Translates to: HVTVTPTKLGKDHKVPASRREQQ*STHPSL
Trigger: AAGGGACGGATGGGTGCTCAATTGCTGCTCACGTCT...AGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CAA 90 bp CCGACTAGAATCTGCCCCTCGCTCATGCTTCTCCCGGCCCCTTTAGACTCTTTACTCTCTCACCAGGACTaGAGGCAATTCTATGCACGA +
Preference number: 5 (lower is better)
Translates to: PTRICPSLMLLPAPLDSLLSHQD*RQFYAR
Trigger: TCGTGCATAGAATTGCCTCAAGTCCTGGTGAGAGAG...TAAAGAGTCTAAAGGGGCCGGGAGAAGCATGAGCGAGGGGCAGATTCTAGTCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CAA 90 bp GACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAAGCACAGCATGGGAGGTGGGGAGAAGCGAATaGGTTTTTGCCCTCTGTCTG +
Preference number: 5 (lower is better)
Translates to: DHKVPASVCFRAASTAWEVGRSE*VFALCL
Trigger: CAGACAGAGGGCAAAAACCAATTCGCTTCTCCCCAC...CTCCCATGCTGTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CAA 90 bp AGTGACAGAAAACTGTACAAGGGACAGCAGTCCCAGCCCTGCCATACACAAGAAATGGCTGGCGTCCCTTaGAATGTCTGTCCCTGGGTC +
Preference number: 5 (lower is better)
Translates to: SDRKLYKGQQSQPCHTQEMAGVP*NVCPWV
Trigger: GACCCAGGGACAGACATTCAAAGGGACGCCAGCCAT...TTCTTGTGTATGGCAGGGCTGGGACTGCTGTCCCTTGTACAGTTTTCTGTCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CAA 90 bp ACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAGGAAGGGATGCTAAGTaGGGGCCCCTGTCACTAAGG +
Preference number: 5 (lower is better)
Translates to: TKLGKDHKVPASVCFRAAGRDAK*GPLSLR
Trigger: CCTTAGTGACAGGGGCCCCAACTTAGCATCCCTTCC...TGCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CAA 90 bp CATCTCACATGTAGGACTGACCCGGCCCCATTAAGAGCCTGTGGTGGGCGGCCCAAAGAACCCACTACATaGCATAGTTCCTTCCAAATC +
Preference number: 5 (lower is better)
Translates to: HLTCRTDPAPLRACGGRPKEPTT*HSSFQI
Trigger: GATTTGGAAGGAACTATGCAATGTAGTGGGTTCTTT...GGGCCGCCCACCACAGGCTCTTAATGGGGCCGGGTCAGTCCTACATGTGAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585266.5
CDS TCA 90 bp TGCGAAGGTCGGCAATGTGGTGGTCGCACTTCTTCATGTCTTTCTTaGAGTTCTCACGGAAGTTCATCAGGGGCTTCTCCACCTCGCTGT +
Preference number: 5 (lower is better)
Translates to: CEGRQCGGRTSSCLS*SSHGSSSGASPPRC
Trigger: ACAGCGAGGTGGAGAAGCCCCTGATGAACTTCCGTGAGAACTTCAAGAAAGACATGAAGAAGTGCGACCACCACATTGCCGACCTTCGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000578456.1
ENST00000579158.5
ENST00000580865.5
ENST00000581871.5
ENST00000585266.5
CDS TCA 90 bp ACCATTCCAGGCTTCTCAGCCTTGTGGTGTGTCCTTATGCAAATCTaGCACGCTGGTCATTTTCTGCCACCATCCCCACATCCGCTGCTT +
Preference number: 5 (lower is better)
Translates to: TIPGFSALWCVLMQI*HAGHFLPPSPHPLL
Trigger: AAGCAGCGGATGTGGGGATGGTGGCAGAAAATGACCAGCGTGTCAGATTTGCATAAGGACACACCACAAGGCTGAGAAGCCTGGAATGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578599.5
CDS CCA 90 bp GCTCCACTCGGTTGGTTTCAGCAGCTGCTGTTCCGGCATCGTGTCTaGGTGAGGGAACGTCACACAGTTTATTGTGATGGTGTTTTCCTT +
Preference number: 5 (lower is better)
Translates to: APLGWFQQLLFRHRV*VRERHTVYCDGVFL
Trigger: AAGGAAAACACCATCACAATAAACTGTGTGACGTTCCCTCACCCAGACACGATGCCGGAACAGCAGCTGCTGAAACCAACCGAGTGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000578599.5
ENST00000578655.1
ENST00000579158.5
ENST00000580811.5
ENST00000580865.5
ENST00000583882.5
ENST00000584146.6
ENST00000585266.5
CDS-3UTR CAA 90 bp CAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCTGCTCTGCTTTTTGCTaGGCGATGAGGATCCCAGGT +
Preference number: 5 (lower is better)
Translates to: QACDSDPYKTRQGPQSSSCSAFC*AMRIPG
Trigger: ACCTGGGATCCTCATCGCCAAGCAAAAAGCAGAGCA...GCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000583882.5
ENST00000585266.5
CDS-3UTR CAA 90 bp AGGGCACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTGCTCTGCTTTTTGCTaGGCGATGAGGATCCCAGGT +
Preference number: 5 (lower is better)
Translates to: RAQACDSDPYKTRQGPQSCSAFC*AMRIPG
Trigger: ACCTGGGATCCTCATCGCCAAGCAAAAAGCAGAGCA...ACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTGCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000583882.5
ENST00000585266.5
CDS-3UTR CAA 90 bp GCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAAGCACAGCATTCCTTGCTCTGCTTTTaGCTTGGCGATGAGGATCCC +
Preference number: 5 (lower is better)
Translates to: ARTTKFQPLFVSERQAQHSLLCF*LGDEDP
Trigger: GGGATCCTCATCGCCAAGCAAAAAGCAGAGCAAGGA...ATGCTGTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp CATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTTCCTTGCTCTGCTTTTaGCTTGGCGATGAGGATCCC +
Preference number: 5 (lower is better)
Translates to: HVTVTPTKLGKDHKVPASSLLCF*LGDEDP
Trigger: GGGATCCTCATCGCCAAGCAAAAAGCAGAGCAAGGA...AGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000583882.5
ENST00000585266.5
CDS-3UTR CAA 90 bp CAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCAGTAGCTCCACTCGGTaGGTTTCAGCAGCTGCTGTT +
Preference number: 5 (lower is better)
Translates to: QACDSDPYKTRQGPQSSSSSSTR*VSAAAV
Trigger: AACAGCAGCTGCTGAAACCAACCGAGTGGAGCTACT...GCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000583882.5
ENST00000585266.5
CDS-3UTR CAA 90 bp AATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAATCACCAGTTCTTCATGTCTTTCTaGAAGTTCTCACGGAAGTTC +
Preference number: 5 (lower is better)
Translates to: NMGEPPARLSGSPFWNHQFFMSF*KFSRKF
Trigger: GAACTTCCGTGAGAACTTCAAGAAAGACATGAAGAA...CTGGTGATTCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000579158.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp CACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGTCTTGTTGCTCAGCTaGATCTCCAGCTGCTGGGTC +
Preference number: 5 (lower is better)
Translates to: HKHVTVTPTKLGKDHKVPVLLLS*ISSCWV
Trigger: GACCCAGCAGCTGGAGATCAAGCTGAGCAACAAGAC...TGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp GACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTCCTCCTCTGTCTTGTaGCTCAGCTTGATCTCCAGC +
Preference number: 5 (lower is better)
Translates to: DSDPYKTRQGPQSSSLCLSSSVL*LSLISS
Trigger: GCTGGAGATCAAGCTGAGCAACAAGACAGAGGAGGA...CAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp GCACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCTCCTCCTCTGTCTTGTaGCTCAGCTTGATCTCCAGC +
Preference number: 5 (lower is better)
Translates to: AQACDSDPYKTRQGPQSSSSSVL*LSLISS
Trigger: GCTGGAGATCAAGCTGAGCAACAAGACAGAGGAGGA...GGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp TCCAGGGCACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAATGTCCTCCTCTGTCTaGTTGCTCAGCTTGATCTCC +
Preference number: 5 (lower is better)
Translates to: SRAQACDSDPYKTRQGPQMSSSV*LLSLIS
Trigger: GGAGATCAAGCTGAGCAACAAGACAGAGGAGGACAT...TTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTGCCCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp CTGTTTGTTTCAGAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCTCGACTGTGCTTTGGTaGAACATGTCTGTTTCATGC +
Preference number: 5 (lower is better)
Translates to: LFVSERQAQHGSQGVFSLSTVLW*NMSVSC
Trigger: GCATGAAACAGACATGTTCAACCAAAGCACAGTCGA...GAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTCTGAAACAAACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp ACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAAGCACAGCATGGGAGTAGTTCCAGCCTCTGTTaGTTTCAGAGCGGCAAGCAC +
Preference number: 5 (lower is better)
Translates to: TTKFQPLFVSERQAQHGSSSSLC*FQSGKH
Trigger: GTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACT...ACTCCCATGCTGTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp GCATGCCTGGCTTGTCTTGAGCATTCGCTGAATGAATGCAGATTAATCAGAACAGCTGGAGGAAGAGCCTaGGGGCTTCCAGGGCACAAG +
Preference number: 5 (lower is better)
Translates to: ACLACLEHSLNECRLIRTAGGRA*GLPGHK
Trigger: CTTGTGCCCTGGAAGCCCCAAGGCTCTTCCTCCAGC...TGTTCTGATTAATCTGCATTCATTCAGCGAATGCTCAAGACAAGCCAGGCATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CAA 90 bp AGTAAGGGTTTGGTGCAGGGCTCTGGAATGTCCAGAAGGAGCGGGAAGCAAAGGGATTCAGCGCTCAATTaGGGGCTAATTTGCCGAATG +
Preference number: 5 (lower is better)
Translates to: SKGLVQGSGMSRRSGKQRDSALN*GLICRM
Trigger: CATTCGGCAAATTAGCCCCAAATTGAGCGCTGAATC...CCTTTGCTTCCCGCTCCTTCTGGACATTCCAGAGCCCTGCACCAAACCCTTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp GCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAAGCACAGCATACACCAAGTAAGGGTTaGGTGCAGGGCTCTGGAATG +
Preference number: 5 (lower is better)
Translates to: ARTTKFQPLFVSERQAQHTPSKG*VQGSGM
Trigger: CATTCCAGAGCCCTGCACCAAACCCTTACTTGGTGT...ATGCTGTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp TTTGTTTCAGAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGAAGTGAGTTGTGCTTGTaGAATTCTGCCCTCACTGCA +
Preference number: 5 (lower is better)
Translates to: FVSERQAQHGSQGVFSLRSELCL*NSALTA
Trigger: TGCAGTGAGGGCAGAATTCAACAAGCACAACTCACT...TCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTCTGAAACAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR CAA 90 bp AATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAATCACCAGACAAGGCTATTGGCTTaGAATGTTTGGAAATCATCC +
Preference number: 5 (lower is better)
Translates to: NMGEPPARLSGSPFWNHQTRLLA*NVWKSS
Trigger: GGATGATTTCCAAACATTCAAAGCCAATAGCCTTGT...CTGGTGATTCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR CAA 90 bp GCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAAGCACAGCATGTATCAATGCCAAGGTaGCTGACCGGTAAGACCCCT +
Preference number: 5 (lower is better)
Translates to: ARTTKFQPLFVSERQAQHVSMPR*LTGKTP
Trigger: AGGGGTCTTACCGGTCAGCAACCTTGGCATTGATAC...ATGCTGTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CAA 90 bp GTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTAGGGGTTCTGGACTGTaGACTCTAGCCCTGGTCTTA +
Preference number: 5 (lower is better)
Translates to: VTVTPTKLGKDHKVPASVRGSGL*TLALVL
Trigger: TAAGACCAGGGCTAGAGTCAACAGTCCAGAACCCCT...AACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CAA 90 bp ACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAGGCTCTTCCTGGAGGTaGTCACAGCAACCAACTTGG +
Preference number: 5 (lower is better)
Translates to: TKLGKDHKVPASVCFRAAGSSWR*SQQPTW
Trigger: CCAAGTTGGTTGCTGTGACAACCTCCAGGAAGAGCC...TGCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CAA 90 bp AGTAAGGGTTTGGTGCAGGGCTCTGGAATGTCCAGAAGGAGCGGGAAGCAAAGGTGGTTGGTGAATTCGTaGGTACACTGTTTCGGTGTG +
Preference number: 5 (lower is better)
Translates to: SKGLVQGSGMSRRSGKQRWLVNS*VHCFGV
Trigger: CACACCGAAACAGTGTACCAACGAATTCACCAACCA...CCTTTGCTTCCCGCTCCTTCTGGACATTCCAGAGCCCTGCACCAAACCCTTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CAA 90 bp CTGTTTGTTTCAGAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCTTTCCAAAAGGGACTTaGGCTCAGCCCAGATTTTTC +
Preference number: 5 (lower is better)
Translates to: LFVSERQAQHGSQGVFSLFPKGT*AQPRFF
Trigger: GAAAAATCTGGGCTGAGCCAAAGTCCCTTTTGGAAA...GAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTCTGAAACAAACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CAA 90 bp TGTCCAGAAGGAGCGGGAAGCAAAGGTGGCGGGACACTGCCTGAAAGGCGACAACACAAGGAATGCATCTaGAGCCTTCTGTTTAAACAC +
Preference number: 5 (lower is better)
Translates to: CPEGAGSKGGGTLPERRQHKECI*SLLFKH
Trigger: GTGTTTAAACAGAAGGCTCAAGATGCATTCCTTGTG...TTGTCGCCTTTCAGGCAGTGTCCCGCCACCTTTGCTTCCCGCTCCTTCTGGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CAA 90 bp AAAATCTTGTTGCTGTCTACCTTCCATCCAACAGGTAAATGCCTCACGACGGTGCCAGCCCCAGCCTTCTaGTCCATGCTGCTTCTGCTC +
Preference number: 5 (lower is better)
Translates to: KILLLSTFHPTGKCLTTVPAPAF*SMLLLL
Trigger: GAGCAGAAGCAGCATGGACAAGAAGGCTGGGGCTGG...CACCGTCGTGAGGCATTTACCTGTTGGATGGAAGGTAGACAGCAACAAGATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CAA 90 bp TGCTGGCCTCTGAGACGAGCTGGTTTGTTTCCATCCCTGAAGCCTTTGGACGAGACAAACACCCTCAGCTaGCAGATGAAGCAACAGATC +
Preference number: 5 (lower is better)
Translates to: CWPLRRAGLFPSLKPLDETNTLS*QMKQQI
Trigger: GATCTGTTGCTTCATCTGCAAGCTGAGGGTGTTTGT...CTCGTCCAAAGGCTTCAGGGATGGAAACAAACCAGCTCGTCTCAGAGGCCAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CAA 90 bp GGATCCAGAAATGTCTCTGGTTCGCATAGAGAGGTACCCAACTGGTCTCGGGACCTCTCTCACCAGGACTaGAGGCAATTCTATGCACGA +
Preference number: 5 (lower is better)
Translates to: GSRNVSGSHREVPNWSRDLSHQD*RQFYAR
Trigger: TCGTGCATAGAATTGCCTCAAGTCCTGGTGAGAGAG...GTCCCGAGACCAGTTGGGTACCTCTCTATGCGAACCAGAGACATTTCTGGATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CAA 90 bp ACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAGTGTCTGTGAAGGGGTaGCTTCCGGTCATCTCCTTC +
Preference number: 5 (lower is better)
Translates to: TKLGKDHKVPASVCFRAAVSVKG*LPVISF
Trigger: GAAGGAGATGACCGGAAGCAACCCCTTCACAGACAC...TGCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CAA 90 bp GTTGAATTCTGCCCTCACTGCAGATGTGCAGGTCAAACCCAAAGTGGTCAATGGGTGTCTGTGAAGGGGTaGCTTCCGGTCATCTCCTTC +
Preference number: 5 (lower is better)
Translates to: VEFCPHCRCAGQTQSGQWVSVKG*LPVISF
Trigger: GAAGGAGATGACCGGAAGCAACCCCTTCACAGACAC...CCATTGACCACTTTGGGTTTGACCTGCACATCTGCAGTGAGGGCAGAATTCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CAA 90 bp CCGACTAGAATCTGCCCCTCGCTCATGCTTCTCCCGGCCCCTTTAGACTCTTTAGAGGTTCCTGTGGCTTaGCTCATTGCTGTTCTTTCA +
Preference number: 5 (lower is better)
Translates to: PTRICPSLMLLPAPLDSLEVPVA*LIAVLS
Trigger: TGAAAGAACAGCAATGAGCAAAGCCACAGGAACCTC...TAAAGAGTCTAAAGGGGCCGGGAGAAGCATGAGCGAGGGGCAGATTCTAGTCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585266.5
CDS CCA 90 bp AATTCTGACATTTCCTTCTGCATTTGTTTGCCCTTCAGCTGTTTCTaGAGCAGTAGTTCAAACCCAGCCACGGTGCCGTTGCCTTGGGGG +
Preference number: 5 (lower is better)
Translates to: NSDISFCICLPFSCF*SSSSNPATVPLPWG
Trigger: CCCCCAAGGCAACGGCACCGTGGCTGGGTTTGAACTACTGCTCCAGAAACAGCTGAAGGGCAAACAAATGCAGAAGGAAATGTCAGAATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000579140.5
ENST00000579158.5
ENST00000580811.5
ENST00000580865.5
ENST00000581871.5
ENST00000584146.6
ENST00000585266.5
CDS CCA 90 bp GACCATTCCAGGCTTCCAGAACAACAACTTCAAAGCCACTTTGCGTaGTTGCTGGCTCCGAAGCCACACAGAGATGACGGATTACAAGGA +
Preference number: 5 (lower is better)
Translates to: DHSRLPEQQLQSHFA*LLAPKPHRDDGLQG
Trigger: TCCTTGTAATCCGTCATCTCTGTGTGGCTTCGGAGCCAGCAACCACGCAAAGTGGCTTTGAAGTTGTTGTTCTGGAAGCCTGGAATGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584389.5
CDS-3UTR CAA 90 bp ACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCATGCTCTGCTTTTTGCTaGGCGATGAGGATCCCAGGT +
Preference number: 5 (lower is better)
Translates to: TKLGKDHKVPASVCFRAACSAFC*AMRIPG
Trigger: ACCTGGGATCCTCATCGCCAAGCAAAAAGCAGAGCA...TGCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp ACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCATCCTTGCTCTGCTTTTaGCTTGGCGATGAGGATCCC +
Preference number: 5 (lower is better)
Translates to: TKLGKDHKVPASVCFRAASLLCF*LGDEDP
Trigger: GGGATCCTCATCGCCAAGCAAAAAGCAGAGCAAGGA...TGCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp TCCAGGGCACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAATCCTTCTGCATTTGTTaGCCCTTCAGCTGTTTCTGG +
Preference number: 5 (lower is better)
Translates to: SRAQACDSDPYKTRQGPQSFCIC*PFSCFW
Trigger: CCAGAAACAGCTGAAGGGCAAACAAATGCAGAAGGA...TTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTGCCCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp AGGGCACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTATGTCCTCCTCTGTCTaGTTGCTCAGCTTGATCTCC +
Preference number: 5 (lower is better)
Translates to: RAQACDSDPYKTRQGPQSMSSSV*LLSLIS
Trigger: GGAGATCAAGCTGAGCAACAAGACAGAGGAGGACAT...ACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp GCTTCCAGGGCACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCATCGACTGTGCTTTGGTaGAACATGTCTGTTTCATGC +
Preference number: 5 (lower is better)
Translates to: ASRAQACDSDPYKTRQGPSTVLW*NMSVSC
Trigger: GCATGAAACAGACATGTTCAACCAAAGCACAGTCGA...TGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTGCCCTGGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp TCCAGAAATGTCTCTGGTTCGCATAGAGAGGTACCCAACTGGTCTCGGGACTCAGGGCTCGACTGTGCTTaGGTTGAACATGTCTGTTTC +
Preference number: 5 (lower is better)
Translates to: SRNVSGSHREVPNWSRDSGLDCA*VEHVCF
Trigger: GAAACAGACATGTTCAACCAAAGCACAGTCGAGCCC...TGAGTCCCGAGACCAGTTGGGTACCTCTCTATGCGAACCAGAGACATTTCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CAA 90 bp GAAAACTGTACAAGGGACAGCAGTCCCAGCCCTGCCATACACAAGAAGACAGAGGGGCTCGACTGTGCTTaGGTTGAACATGTCTGTTTC +
Preference number: 5 (lower is better)
Translates to: ENCTRDSSPSPAIHKKTEGLDCA*VEHVCF
Trigger: GAAACAGACATGTTCAACCAAAGCACAGTCGAGCCC...CTCTGTCTTCTTGTGTATGGCAGGGCTGGGACTGCTGTCCCTTGTACAGTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp AGTGACAGAAAACTGTACAAGGGACAGCAGTCCCAGCCCTGCCATACACAAGAAAGTTCCAGCCTCTGTTaGTTTCAGAGCGGCAAGCAC +
Preference number: 5 (lower is better)
Translates to: SDRKLYKGQQSQPCHTQESSSLC*FQSGKH
Trigger: GTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACT...TTCTTGTGTATGGCAGGGCTGGGACTGCTGTCCCTTGTACAGTTTTCTGTCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp GCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCGATTCAGCGCTCAATTaGGGGCTAATTTGCCGAATG +
Preference number: 5 (lower is better)
Translates to: ACDSDPYKTRQGPQSSSLDSALN*GLICRM
Trigger: CATTCGGCAAATTAGCCCCAAATTGAGCGCTGAATC...GAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp AAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAAGCACAGCATGGGAGTCAGGGTCGGTTTCTAGCACGTaGACTGAAAGACCAGTGAGT +
Preference number: 5 (lower is better)
Translates to: KVPASVCFRAASTAWESGSVSST*TERPVS
Trigger: ACTCACTGGTCTTTCAGTCAACGTGCTAGAAACCGA...CCCTGACTCCCATGCTGTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR CAA 90 bp AGTAAGGGTTTGGTGCAGGGCTCTGGAATGTCCAGAAGGAGCGGGAAGCAAAGGTTTCTGAAATTCGAATaGGATATGGGCCGTGAGGGT +
Preference number: 5 (lower is better)
Translates to: SKGLVQGSGMSRRSGKQRFLKFE*DMGREG
Trigger: ACCCTCACGGCCCATATCCAATTCGAATTTCAGAAA...CCTTTGCTTCCCGCTCCTTCTGGACATTCCAGAGCCCTGCACCAAACCCTTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CAA 90 bp TACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAGGGGTTCTGGACTGTaGACTCTAGCCCTGGTCTTA +
Preference number: 5 (lower is better)
Translates to: YKTRQGPQSSSLCLFQSGRGSGL*TLALVL
Trigger: TAAGACCAGGGCTAGAGTCAACAGTCCAGAACCCCT...GCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CAA 90 bp CGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAAGCACAGCAGTTGCATCCTAACCTaGATTTCAACCAGAAACGGG +
Preference number: 5 (lower is better)
Translates to: RQGPQSSSLCLFQSGKHSSCILT*ISTRNG
Trigger: CCCGTTTCTGGTTGAAATCAAGGTTAGGATGCAACT...GCTGTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CAA 90 bp CATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTAGAAGGGGCTGACTaGTTCTCAGAAATGGAAGGG +
Preference number: 5 (lower is better)
Translates to: HVTVTPTKLGKDHKVPASVEGAD*FSEMEG
Trigger: CCCTTCCATTTCTGAGAACAAGTCAGCCCCTTCTAC...AGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CAA 90 bp AGGGCACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTGTAGAAGGGGCTGACTaGTTCTCAGAAATGGAAGGG +
Preference number: 5 (lower is better)
Translates to: RAQACDSDPYKTRQGPQSVEGAD*FSEMEG
Trigger: CCCTTCCATTTCTGAGAACAAGTCAGCCCCTTCTAC...ACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CAA 90 bp TACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCGGTCGTGCAAACAAGTaGAAGACCCTGGGCCAAGAA +
Preference number: 5 (lower is better)
Translates to: YKTRQGPQSSSLCLFQSGGRANK*KTLGQE
Trigger: TTCTTGGCCCAGGGTCTTCAACTTGTTTGCACGACC...GCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CAA 90 bp AAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAAGCACAGCATGGGAGTCAGGGACAAACACCCTCAGCTaGCAGATGAAGCAACAGATC +
Preference number: 5 (lower is better)
Translates to: KVPASVCFRAASTAWESGTNTLS*QMKQQI
Trigger: GATCTGTTGCTTCATCTGCAAGCTGAGGGTGTTTGT...CCCTGACTCCCATGCTGTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CAA 90 bp TCCAGGGCACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAACAAACACCCTCAGCTaGCAGATGAAGCAACAGATC +
Preference number: 5 (lower is better)
Translates to: SRAQACDSDPYKTRQGPQTNTLS*QMKQQI
Trigger: GATCTGTTGCTTCATCTGCAAGCTGAGGGTGTTTGT...TTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTGCCCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CAA 90 bp AATATGGGGGAGCCCCCAGCTAGGCTGTCCGGGTCACCCTTCTGGAATCACCAGACCCATTTGGCATTTTaGCAAGAGTTTTTAAACCAG +
Preference number: 5 (lower is better)
Translates to: NMGEPPARLSGSPFWNHQTHLAF*QEFLNQ
Trigger: CTGGTTTAAAAACTCTTGCAAAAATGCCAAATGGGT...CTGGTGATTCCAGAAGGGTGACCCGGACAGCCTAGCTGGGGGCTCCCCCATATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000579158.5
CDS CCA 90 bp CCAGGCTTCCAGAACAACAACTTCAAAGCCACTTTGCGTGGTTGCTaGCTCCGAAGCCACACAGAGATGACGGATTACAAGGAAGAAATC +
Preference number: 5 (lower is better)
Translates to: PGFQNNNFKATLRGC*LRSHTEMTDYKEEI
Trigger: GATTTCTTCCTTGTAATCCGTCATCTCTGTGTGGCTTCGGAGCCAGCAACCACGCAAAGTGGCTTTGAAGTTGTTGTTCTGGAAGCCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584389.5
CDS-3UTR CAA 90 bp ACCAGTGAGTTGTGCTTGTTGAATTCTGCCCTCACTGCAGATGTGCAGGTCAAATCCTTGCTCTGCTTTTaGCTTGGCGATGAGGATCCC +
Preference number: 5 (lower is better)
Translates to: TSELCLLNSALTADVQVKSLLCF*LGDEDP
Trigger: GGGATCCTCATCGCCAAGCAAAAAGCAGAGCAAGGA...TTTGACCTGCACATCTGCAGTGAGGGCAGAATTCAACAAGCACAACTCACTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR CAA 90 bp ACCAGTGAGTTGTGCTTGTTGAATTCTGCCCTCACTGCAGATGTGCAGGTCAAATCCTCCTCTGTCTTGTaGCTCAGCTTGATCTCCAGC +
Preference number: 5 (lower is better)
Translates to: TSELCLLNSALTADVQVKSSSVL*LSLISS
Trigger: GCTGGAGATCAAGCTGAGCAACAAGACAGAGGAGGA...TTTGACCTGCACATCTGCAGTGAGGGCAGAATTCAACAAGCACAACTCACTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR CAA 90 bp ACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGATCCTCCTCTGTCTTGTaGCTCAGCTTGATCTCCAGC +
Preference number: 5 (lower is better)
Translates to: TPTKLGKDHKVPASVCFRSSSVL*LSLISS
Trigger: GCTGGAGATCAAGCTGAGCAACAAGACAGAGGAGGA...TCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp CTGAGACGAGCTGGTTTGTTTCCATCCCTGAAGCCTTTGGACGAGCTGGATGAGCAATTTGGGGCTAATTaGCCGAATGAGGTAGTTCCA +
Preference number: 5 (lower is better)
Translates to: LRRAGLFPSLKPLDELDEQFGAN*PNEVVP
Trigger: TGGAACTACCTCATTCGGCAAATTAGCCCCAAATTG...CTCATCCAGCTCGTCCAAAGGCTTCAGGGATGGAAACAAACCAGCTCGTCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp GCACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCGATTCAGCGCTCAATTaGGGGCTAATTTGCCGAATG +
Preference number: 5 (lower is better)
Translates to: AQACDSDPYKTRQGPQSSDSALN*GLICRM
Trigger: CATTCGGCAAATTAGCCCCAAATTGAGCGCTGAATC...GGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp GCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAAGCACAGCATAGTGAGTTGTGCTTGTaGAATTCTGCCCTCACTGCA +
Preference number: 5 (lower is better)
Translates to: ARTTKFQPLFVSERQAQHSELCL*NSALTA
Trigger: TGCAGTGAGGGCAGAATTCAACAAGCACAACTCACT...ATGCTGTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR CAA 90 bp GCACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGTGAGTTGTGCTTGTaGAATTCTGCCCTCACTGCA +
Preference number: 5 (lower is better)
Translates to: AQACDSDPYKTRQGPQSSSELCL*NSALTA
Trigger: TGCAGTGAGGGCAGAATTCAACAAGCACAACTCACT...GGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR CAA 90 bp TCCAGGGCACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAATTTCTGAAATTCGAATaGGATATGGGCCGTGAGGGT +
Preference number: 5 (lower is better)
Translates to: SRAQACDSDPYKTRQGPQFLKFE*DMGREG
Trigger: ACCCTCACGGCCCATATCCAATTCGAATTTCAGAAA...TTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTGCCCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CAA 90 bp GACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTGGTTGGTGAATTCGTaGGTACACTGTTTCGGTGTG +
Preference number: 5 (lower is better)
Translates to: DSDPYKTRQGPQSSSLCLWLVNS*VHCFGV
Trigger: CACACCGAAACAGTGTACCAACGAATTCACCAACCA...CAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CAA 90 bp AGTGACAGAAAACTGTACAAGGGACAGCAGTCCCAGCCCTGCCATACACAAGAACTCTCTCACCAGGACTaGAGGCAATTCTATGCACGA +
Preference number: 5 (lower is better)
Translates to: SDRKLYKGQQSQPCHTQELSHQD*RQFYAR
Trigger: TCGTGCATAGAATTGCCTCAAGTCCTGGTGAGAGAG...TTCTTGTGTATGGCAGGGCTGGGACTGCTGTCCCTTGTACAGTTTTCTGTCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CAA 90 bp ACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGATACAGTAGCGTGACATaGGGAAGTCTGCGGCCCATA +
Preference number: 5 (lower is better)
Translates to: TPTKLGKDHKVPASVCFRYSSVT*GSLRPI
Trigger: TATGGGCCGCAGACTTCCCAATGTCACGCTACTGTA...TCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542249.5
CDS GCA 90 bp ATTCCAGGCTTCCAGAACAACAACTTCAAAGCCACTTTGCGTGGTTaGTGGCTCCGAAGCCACACAGAGATGACGGATTACAAGGAAGAA +
Preference number: 5 (lower is better)
Translates to: IPGFQNNNFKATLRG*WLRSHTEMTDYKEE
Trigger: TTCTTCCTTGTAATCCGTCATCTCTGTGTGGCTTCGGAGCCAGCAACCACGCAAAGTGGCTTTGAAGTTGTTGTTCTGGAAGCCTGGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584389.5
CDS-3UTR CAA 90 bp GCATGCCTGGCTTGTCTTGAGCATTCGCTGAATGAATGCAGATTAATCAGAACAGTCTTGTTGCTCAGCTaGATCTCCAGCTGCTGGGTC +
Preference number: 5 (lower is better)
Translates to: ACLACLEHSLNECRLIRTVLLLS*ISSCWV
Trigger: GACCCAGCAGCTGGAGATCAAGCTGAGCAACAAGAC...TGTTCTGATTAATCTGCATTCATTCAGCGAATGCTCAAGACAAGCCAGGCATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CAA 90 bp AATTCTGCCCTCACTGCAGATGTGCAGGTCAAACCCAAAGTGGTCAATGGGAAAATGTCCTCCTCTGTCTaGTTGCTCAGCTTGATCTCC +
Preference number: 5 (lower is better)
Translates to: NSALTADVQVKPKVVNGKMSSSV*LLSLIS
Trigger: GGAGATCAAGCTGAGCAACAAGACAGAGGAGGACAT...TTTCCCATTGACCACTTTGGGTTTGACCTGCACATCTGCAGTGAGGGCAGAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR CAA 90 bp CATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTTCGACTGTGCTTTGGTaGAACATGTCTGTTTCATGC +
Preference number: 5 (lower is better)
Translates to: HVTVTPTKLGKDHKVPASSTVLW*NMSVSC
Trigger: GCATGAAACAGACATGTTCAACCAAAGCACAGTCGA...AGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp AGGGCACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTCAATTTGGGGCTAATTaGCCGAATGAGGTAGTTCCA +
Preference number: 5 (lower is better)
Translates to: RAQACDSDPYKTRQGPQSQFGAN*PNEVVP
Trigger: TGGAACTACCTCATTCGGCAAATTAGCCCCAAATTG...ACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp TACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCGATTCAGCGCTCAATTaGGGGCTAATTTGCCGAATG +
Preference number: 5 (lower is better)
Translates to: YKTRQGPQSSSLCLFQSGDSALN*GLICRM
Trigger: CATTCGGCAAATTAGCCCCAAATTGAGCGCTGAATC...GCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp ACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAGATTCAGCGCTCAATTaGGGGCTAATTTGCCGAATG +
Preference number: 5 (lower is better)
Translates to: TKLGKDHKVPASVCFRAADSALN*GLICRM
Trigger: CATTCGGCAAATTAGCCCCAAATTGAGCGCTGAATC...TGCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp TTTGTTTCAGAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGAACAAGGCTATTGGCTTaGAATGTTTGGAAATCATCC +
Preference number: 5 (lower is better)
Translates to: FVSERQAQHGSQGVFSLRTRLLA*NVWKSS
Trigger: GGATGATTTCCAAACATTCAAAGCCAATAGCCTTGT...TCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTCTGAAACAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR CAA 90 bp TCCAGAAATGTCTCTGGTTCGCATAGAGAGGTACCCAACTGGTCTCGGGACTCATTTCACAAACAGATCTaGTGCATCAGTCTCCTGGGT +
Preference number: 5 (lower is better)
Translates to: SRNVSGSHREVPNWSRDSFHKQI*CISLLG
Trigger: ACCCAGGAGACTGATGCACAAGATCTGTTTGTGAAA...TGAGTCCCGAGACCAGTTGGGTACCTCTCTATGCGAACCAGAGACATTTCTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CAA 90 bp CTGTTTGTTTCAGAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCTTCGAATGTTATGGCTaGTATTTCCAAAAGGGACTT +
Preference number: 5 (lower is better)
Translates to: LFVSERQAQHGSQGVFSLFECYG*YFQKGL
Trigger: AAGTCCCTTTTGGAAATACAAGCCATAACATTCGAA...GAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTCTGAAACAAACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CAA 90 bp CATGATTCTGATCCTGACACCTGGCTTAGAGACAGAGCCCTCCCTACCCTGATCCACAAGGAATGCATCTaGAGCCTTCTGTTTAAACAC +
Preference number: 5 (lower is better)
Translates to: HDSDPDTWLRDRALPTLIHKECI*SLLFKH
Trigger: GTGTTTAAACAGAAGGCTCAAGATGCATTCCTTGTG...GATCAGGGTAGGGAGGGCTCTGTCTCTAAGCCAGGTGTCAGGATCAGAATCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS CCA 90 bp TTTTCCTTGCTCTGCTTTTTGCTTGGCGATGAGGATCCCAGGTTCTaGGGAGAGAGGCAAGAAACATCGTCAAAGCTGTTCTCCATATTG +
Preference number: 5 (lower is better)
Translates to: FSLLCFLLGDEDPRF*GERQETSSKLFSIL
Trigger: CAATATGGAGAACAGCTTTGACGATGTTTCTTGCCTCTCTCCCCAGAACCTGGGATCCTCATCGCCAAGCAAAAAGCAGAGCAAGGAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000580865.5
ENST00000583882.5
CDS-3UTR CAA 90 bp GCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTTCTTCATGTCTTTCTaGAAGTTCTCACGGAAGTTC +
Preference number: 5 (lower is better)
Translates to: ACDSDPYKTRQGPQSSSLFFMSF*KFSRKF
Trigger: GAACTTCCGTGAGAACTTCAAGAAAGACATGAAGAA...GAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp CACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCACAATTTGGGGCTAATTaGCCGAATGAGGTAGTTCCA +
Preference number: 5 (lower is better)
Translates to: HKHVTVTPTKLGKDHKVPQFGAN*PNEVVP
Trigger: TGGAACTACCTCATTCGGCAAATTAGCCCCAAATTG...TGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp TTTGTTTCAGAGCGGCAAGCACAGCATGGGAGTCAGGGGGTCTTCAGCCTCAGAATTGGCTTTGAATGTTaGGAAATCATCCACAGAGTA +
Preference number: 5 (lower is better)
Translates to: FVSERQAQHGSQGVFSLRIGFEC*EIIHRV
Trigger: TACTCTGTGGATGATTTCCAAACATTCAAAGCCAAT...TCTGAGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTCTGAAACAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR CAA 90 bp CATGATTCTGATCCTGACACCTGGCTTAGAGACAGAGCCCTCCCTACCCTGATCACAAGGCTATTGGCTTaGAATGTTTGGAAATCATCC +
Preference number: 5 (lower is better)
Translates to: HDSDPDTWLRDRALPTLITRLLA*NVWKSS
Trigger: GGATGATTTCCAAACATTCAAAGCCAATAGCCTTGT...GATCAGGGTAGGGAGGGCTCTGTCTCTAAGCCAGGTGTCAGGATCAGAATCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR CAA 90 bp CACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCATTTCCAAAAGGGACTTaGGCTCAGCCCAGATTTTTC +
Preference number: 5 (lower is better)
Translates to: HKHVTVTPTKLGKDHKVPFPKGT*AQPRFF
Trigger: GAAAAATCTGGGCTGAGCCAAAGTCCCTTTTGGAAA...TGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CAA 90 bp ACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCACTGTTTAAACACTCCTaGTCAAGACTACCTGCAGCT +
Preference number: 5 (lower is better)
Translates to: TKLGKDHKVPASVCFRAALFKHS*SRLPAA
Trigger: AGCTGCAGGTAGTCTTGACAAGGAGTGTTTAAACAG...TGCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CAA 90 bp TACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCCTGTTTAAACACTCCTaGTCAAGACTACCTGCAGCT +
Preference number: 5 (lower is better)
Translates to: YKTRQGPQSSSLCLFQSGLFKHS*SRLPAA
Trigger: AGCTGCAGGTAGTCTTGACAAGGAGTGTTTAAACAG...GCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CAA 90 bp CAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCACAAGGAATGCATCTaGAGCCTTCTGTTTAAACAC +
Preference number: 5 (lower is better)
Translates to: QACDSDPYKTRQGPQSSSHKECI*SLLFKH
Trigger: GTGTTTAAACAGAAGGCTCAAGATGCATTCCTTGTG...GCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CAA 90 bp GCACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCTTCTTCATGTCTTTCTaGAAGTTCTCACGGAAGTTC +
Preference number: 5 (lower is better)
Translates to: AQACDSDPYKTRQGPQSSFFMSF*KFSRKF
Trigger: GAACTTCCGTGAGAACTTCAAGAAAGACATGAAGAA...GGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp CAGATGGCGCCTGATCTCATGGGACACGATTCAGCGCTCAATTTGGGGCTAATTTTCTTCATGTCTTTCTaGAAGTTCTCACGGAAGTTC +
Preference number: 5 (lower is better)
Translates to: QMAPDLMGHDSALNLGLIFFMSF*KFSRKF
Trigger: GAACTTCCGTGAGAACTTCAAGAAAGACATGAAGAA...AATTAGCCCCAAATTGAGCGCTGAATCGTGTCCCATGAGATCAGGCGCCATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp AATTCTGCCCTCACTGCAGATGTGCAGGTCAAACCCAAAGTGGTCAATGGGAAATCGACTGTGCTTTGGTaGAACATGTCTGTTTCATGC +
Preference number: 5 (lower is better)
Translates to: NSALTADVQVKPKVVNGKSTVLW*NMSVSC
Trigger: GCATGAAACAGACATGTTCAACCAAAGCACAGTCGA...TTTCCCATTGACCACTTTGGGTTTGACCTGCACATCTGCAGTGAGGGCAGAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR CAA 90 bp TGGGGGAAGGATGGATTGGCATTTCCAGAGGAGACTTTACAGATGGCGCCTGATACAAGGCTATTGGCTTaGAATGTTTGGAAATCATCC +
Preference number: 5 (lower is better)
Translates to: WGKDGLAFPEETLQMAPDTRLLA*NVWKSS
Trigger: GGATGATTTCCAAACATTCAAAGCCAATAGCCTTGT...ATCAGGCGCCATCTGTAAAGTCTCCTCTGGAAATGCCAATCCATCCTTCCCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR CAA 90 bp ACCAGTGAGTTGTGCTTGTTGAATTCTGCCCTCACTGCAGATGTGCAGGTCAAACTGTTTAAACACTCCTaGTCAAGACTACCTGCAGCT +
Preference number: 5 (lower is better)
Translates to: TSELCLLNSALTADVQVKLFKHS*SRLPAA
Trigger: AGCTGCAGGTAGTCTTGACAAGGAGTGTTTAAACAG...TTTGACCTGCACATCTGCAGTGAGGGCAGAATTCAACAAGCACAACTCACTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CAA 90 bp AGTGACAGAAAACTGTACAAGGGACAGCAGTCCCAGCCCTGCCATACACAAGAACTGTGGCTTTGCTCATaGCTGTTCTTTCACAAAGAA +
Preference number: 5 (lower is better)
Translates to: SDRKLYKGQQSQPCHTQELWLCS*LFFHKE
Trigger: TTCTTTGTGAAAGAACAGCAATGAGCAAAGCCACAG...TTCTTGTGTATGGCAGGGCTGGGACTGCTGTCCCTTGTACAGTTTTCTGTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585266.5
CDS-3UTR CAA 90 bp AGTGACAGAAAACTGTACAAGGGACAGCAGTCCCAGCCCTGCCATACACAAGAATTCTTCATGTCTTTCTaGAAGTTCTCACGGAAGTTC +
Preference number: 5 (lower is better)
Translates to: SDRKLYKGQQSQPCHTQEFFMSF*KFSRKF
Trigger: GAACTTCCGTGAGAACTTCAAGAAAGACATGAAGAA...TTCTTGTGTATGGCAGGGCTGGGACTGCTGTCCCTTGTACAGTTTTCTGTCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp CACAAGCATGTGACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCATTCTTCATGTCTTTCTaGAAGTTCTCACGGAAGTTC +
Preference number: 5 (lower is better)
Translates to: HKHVTVTPTKLGKDHKVPFFMSF*KFSRKF
Trigger: GAACTTCCGTGAGAACTTCAAGAAAGACATGAAGAA...TGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTCACATGCTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000580865.5
ENST00000585266.5
CDS-3UTR CAA 90 bp CAGATGGCGCCTGATCTCATGGGACACGATTCAGCGCTCAATTTGGGGCTAATTATTGGCTTTGAATGTTaGGAAATCATCCACAGAGTA +
Preference number: 5 (lower is better)
Translates to: QMAPDLMGHDSALNLGLIIGFEC*EIIHRV
Trigger: TACTCTGTGGATGATTTCCAAACATTCAAAGCCAAT...AATTAGCCCCAAATTGAGCGCTGAATCGTGTCCCATGAGATCAGGCGCCATCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000585266.5
CDS-3UTR CAA 90 bp ACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAAGCACAGCATGGGAGTTTCGAATGTTATGGCTaGTATTTCCAAAAGGGACTT +
Preference number: 5 (lower is better)
Translates to: TTKFQPLFVSERQAQHGSFECYG*YFQKGL
Trigger: AAGTCCCTTTTGGAAATACAAGCCATAACATTCGAA...ACTCCCATGCTGTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CAA 90 bp CAAAGACTTGCCCTAACCCATCTCACATGTAGGACTGACCCGGCCCCATTAAGATTCGAATGTTATGGCTaGTATTTCCAAAAGGGACTT +
Preference number: 5 (lower is better)
Translates to: QRLALTHLTCRTDPAPLRFECYG*YFQKGL
Trigger: AAGTCCCTTTTGGAAATACAAGCCATAACATTCGAA...TCTTAATGGGGCCGGGTCAGTCCTACATGTGAGATGGGTTAGGGCAAGTCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CAA 90 bp GACAGTGACCCCTACAAAACTCGGCAAGGACCACAAAGTTCCAGCCTCTGTTTGCACAAGACACTAAATTaGTCAAAATTCACAGAGCTG +
Preference number: 5 (lower is better)
Translates to: DSDPYKTRQGPQSSSLCLHKTLN*SKFTEL
Trigger: CAGCTCTGTGAATTTTGACAAATTTAGTGTCTTGTG...CAAACAGAGGCTGGAACTTTGTGGTCCTTGCCGAGTTTTGTAGGGGTCACTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CAA 90 bp TCCAGAAATGTCTCTGGTTCGCATAGAGAGGTACCCAACTGGTCTCGGGACTCACACAAGACACTAAATTaGTCAAAATTCACAGAGCTG +
Preference number: 5 (lower is better)
Translates to: SRNVSGSHREVPNWSRDSHKTLN*SKFTEL
Trigger: CAGCTCTGTGAATTTTGACAAATTTAGTGTCTTGTG...TGAGTCCCGAGACCAGTTGGGTACCTCTCTATGCGAACCAGAGACATTTCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS-3UTR CAA 90 bp ACCACAAAGTTCCAGCCTCTGTTTGTTTCAGAGCGGCAAGCACAGCATGGGAGTCACAAGACACTAAATTaGTCAAAATTCACAGAGCTG +
Preference number: 5 (lower is better)
Translates to: TTKFQPLFVSERQAQHGSHKTLN*SKFTEL
Trigger: CAGCTCTGTGAATTTTGACAAATTTAGTGTCTTGTG...ACTCCCATGCTGTGCTTGCCGCTCTGAAACAAACAGAGGCTGGAACTTTGTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS CCA 90 bp CCCACTACATTGCATAGTTCCTTCCAAATCCGCTCCAGTGCTTGCTaGGAAATTAACAACTTGTTCTGGACTTTCCAGATGCAATGTTTC +
Preference number: 5 (lower is better)
Translates to: PTTLHSSFQIRSSAC*EINNLFWTFQMQCF
Trigger: GAAACATTGCATCTGGAAAGTCCAGAACAAGTTGTTAATTTCCCAGCAAGCACTGGAGCGGATTTGGAAGGAACTATGCAATGTAGTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585266.5
CDS-3UTR CAA 90 bp AAAATCTTGTTGCTGTCTACCTTCCATCCAACAGGTAAATGCCTCACGACGGTGTTCTTCATGTCTTTCTaGAAGTTCTCACGGAAGTTC +
Preference number: 5 (lower is better)
Translates to: KILLLSTFHPTGKCLTTVFFMSF*KFSRKF
Trigger: GAACTTCCGTGAGAACTTCAAGAAAGACATGAAGAA...CACCGTCGTGAGGCATTTACCTGTTGGATGGAAGGTAGACAGCAACAAGATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
CDS TCA 72 bp CTTCCCACCAGCCGCCGTCCGGGACCTGCAGCAGCGTaGTCAGCTCGCCCGCGGCGAAGCGCAGCCCCTGGC +
Preference number: 6 (lower is better)
Translates to: LPTSRRPGPAAA*SARPRRSAAPG
Trigger: GCCAGGGGCTGCGCTTCGCCGCGGGCGAGCTGATCACGCTGCTGCAGGTCCCGGACGGCGGCTGGTGGGAAG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432992.7
CDS GCA 72 bp GGACATGGCCTTGGCGCCCGGGTTCACAGCGCAGCCTaGATTCCCGCCGAGCCCCACGGGCTGGGCAGCGGC +
Preference number: 6 (lower is better)
Translates to: GHGLGARVHSAA*IPAEPHGLGSG
Trigger: GCCGCTGCCCAGCCCGTGGGGCTCGGCGGGAATGCAGGCTGCGCTGTGAACCCGGGCGCCAAGGCCATGTCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432992.7
CDS CAA 90 bp CCGGAGAAGGGGTACAGGGTCCGGCAGCGAGCGCCGGACATGGCCTaGGCGCCCGGGTTCACAGCGCAGCCTGCATTCCCGCCGAGCCCC +
Preference number: 6 (lower is better)
Translates to: PEKGYRVRQRAPDMA*APGFTAQPAFPPSP
Trigger: GGGGCTCGGCGGGAATGCAGGCTGCGCTGTGAACCCGGGCGCCAAGGCCATGTCCGGCGCTCGCTGCCGGACCCTGTACCCCTTCTCCGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432992.7
CDS GCA 72 bp TCCTTCTCGCCTTCCCACCAGCCGCCGTCCGGGACCTaGAGCAGCGTGATCAGCTCGCCCGCGGCGAAGCGC +
Preference number: 6 (lower is better)
Translates to: SFSPSHQPPSGT*SSVISSPAAKR
Trigger: GCGCTTCGCCGCGGGCGAGCTGATCACGCTGCTGCAGGTCCCGGACGGCGGCTGGTGGGAAGGCGAGAAGGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432992.7
CDS CCA 72 bp GGTACAGGGTCCGGCAGCGAGCGCCGGACATGGCCTTaGCGCCCGGGTTCACAGCGCAGCCTGCATTCCCGC +
Preference number: 6 (lower is better)
Translates to: GTGSGSERRTWP*RPGSQRSLHSR
Trigger: GCGGGAATGCAGGCTGCGCTGTGAACCCGGGCGCCAAGGCCATGTCCGGCGCTCGCTGCCGGACCCTGTACC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432992.7
CDS CAA 72 bp GGGTACAGGGTCCGGCAGCGAGCGCCGGACATGGCCTaGGCGCCCGGGTTCACAGCGCAGCCTGCATTCCCG +
Preference number: 6 (lower is better)
Translates to: GYRVRQRAPDMA*APGFTAQPAFP
Trigger: CGGGAATGCAGGCTGCGCTGTGAACCCGGGCGCCAAGGCCATGTCCGGCGCTCGCTGCCGGACCCTGTACCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432992.7
CDS CCA 72 bp AGAAGGGGTACAGGGTCCGGCAGCGAGCGCCGGACATaGCCTTGGCGCCCGGGTTCACAGCGCAGCCTGCAT +
Preference number: 6 (lower is better)
Translates to: RRGTGSGSERRT*PWRPGSQRSLH
Trigger: ATGCAGGCTGCGCTGTGAACCCGGGCGCCAAGGCCATGTCCGGCGCTCGCTGCCGGACCCTGTACCCCTTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432992.7
CDS TCA 72 bp CACCATATTCTGGGCCAGGGCAAGCAGGGGTCTCCCTaGCCCCACGCTGTTCCCACGCCCAGCTCTCGGGCT +
Preference number: 6 (lower is better)
Translates to: HHILGQGKQGSP*PHAVPTPSSRA
Trigger: AGCCCGAGAGCTGGGCGTGGGAACAGCGTGGGGTCAGGGAGACCCCTGCTTGCCCTGGCCCAGAATATGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000580865.5
ENST00000583882.5
CDS TCA 72 bp GTTCATATTCTGGGCCAGGGCAAGCAGGGGTCTCCCTaGCCCCACGCTGTTCCCACGCCCAGCTCTCGGGCT +
Preference number: 6 (lower is better)
Translates to: VHILGQGKQGSP*PHAVPTPSSRA
Trigger: AGCCCGAGAGCTGGGCGTGGGAACAGCGTGGGGTCAGGGAGACCCCTGCTTGCCCTGGCCCAGAATATGAAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580811.5
CDS CCA 72 bp GGGCTTTCCGGGCCTTCTCCACCGAGGCATAGCGGCTaGCGAGCTGCTTGCGAAGGTCGGCAATGTGGTGGT +
Preference number: 6 (lower is better)
Translates to: GLSGPSPPRHSG*RAACEGRQCGG
Trigger: ACCACCACATTGCCGACCTTCGCAAGCAGCTCGCCAGCCGCTATGCCTCGGTGGAGAAGGCCCGGAAAGCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000578456.1
ENST00000579158.5
ENST00000580865.5
ENST00000585266.5
CDS CCA 72 bp GGGCTGAGGCAAGTCGCTAGCCCAGGGCCAGTGTTCTaGGCACCCCAGCGGAGGTTCCTGTGGCTTTGCTCA +
Preference number: 6 (lower is better)
Translates to: GLRQVASPGPVF*APQRRFLWLCS
Trigger: TGAGCAAAGCCACAGGAACCTCCGCTGGGGTGCCCAGAACACTGGCCCTGGGCTAGCGACTTGCCTCAGCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000578655.1
ENST00000579140.5
ENST00000580043.1
ENST00000585266.5
CDS TCA 72 bp CTGACCCCACGCTGTTCCCACGCCCAGCTCTCGGGCTaGAGGCGAATTAAGGAAGCCTCCTGCACAGGCTCT +
Preference number: 6 (lower is better)
Translates to: LTPRCSHAQLSG*RRIKEASCTGS
Trigger: AGAGCCTGTGCAGGAGGCTTCCTTAATTCGCCTTCAGCCCGAGAGCTGGGCGTGGGAACAGCGTGGGGTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580811.5
CDS GCA 72 bp CTGGGGGCTGCTACCTCAGAGGAGAGTCTTGGGTCCTaGCTGAAGCCCTCAGACTCAGCACCAAGACTCCGC +
Preference number: 6 (lower is better)
Translates to: LGAATSEESLGS*LKPSDSAPRLR
Trigger: GCGGAGTCTTGGTGCTGAGTCTGAGGGCTTCAGGCAGGACCCAAGACTCTCCTCTGAGGTAGCAGCCCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000578655.1
ENST00000579140.5
ENST00000580043.1
ENST00000584146.6
ENST00000585266.5
CDS TCA 72 bp TGTCCACAGGGCGGATGTTGCCCGTCTTGTGCTCTCTaGCCCACAGCTCCCTGTCTTTGGCCGGGTCCACTT +
Preference number: 6 (lower is better)
Translates to: CPQGGCCPSCAL*PTAPCLWPGPL
Trigger: AAGTGGACCCGGCCAAAGACAGGGAGCTGTGGGTCAGAGAGCACAAGACGGGCAACATCCGCCCTGTGGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000323816.8
ENST00000396115.6
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000578456.1
ENST00000579158.5
ENST00000580865.5
ENST00000581112.5
ENST00000585266.5
CDS TCA 72 bp AGCGTGACATTGGGAAGTCTGCGGCCCATAAACCCCTaGGGTCAGAGGCAGCACACACGTGACCTCCGGGGT +
Preference number: 6 (lower is better)
Translates to: SVTLGSLRPINP*GQRQHTRDLRG
Trigger: ACCCCGGAGGTCACGTGTGTGCTGCCTCTGACCTCAGGGGTTTATGGGCCGCAGACTTCCCAATGTCACGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542249.5
CDS GCA 72 bp CCTTCTCCACCGAGGCATAGCGGCTGGCGAGCTGCTTaGGAAGGTCGGCAATGTGGTGGTCGCACTTCTTCA +
Preference number: 6 (lower is better)
Translates to: PSPPRHSGWRAA*EGRQCGGRTSS
Trigger: TGAAGAAGTGCGACCACCACATTGCCGACCTTCGCAAGCAGCTCGCCAGCCGCTATGCCTCGGTGGAGAAGG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000578456.1
ENST00000579158.5
ENST00000580865.5
ENST00000585266.5
CDS GCA 72 bp ATCTCCAGCTGCTGGGTCTTCATCTCCAGGTCTCTCTaGCGCTCTGTGAGGGCTTTCCGGGCCTTCTCCACC +
Preference number: 6 (lower is better)
Translates to: ISSCWVFISRSL*RSVRAFRAFST
Trigger: GGTGGAGAAGGCCCGGAAAGCCCTCACAGAGCGGCAGAGAGACCTGGAGATGAAGACCCAGCAGCTGGAGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000578456.1
ENST00000579158.5
ENST00000580865.5
ENST00000585266.5
CDS GCA 72 bp ATCTCCATGTCCACAGGGCGGATGTTGCCCGTCTTGTaGTCTCTGACCCACAGCTCCCTGTCTTTGGCCGGG +
Preference number: 6 (lower is better)
Translates to: ISMSTGRMLPVL*SLTHSSLSLAG
Trigger: CCCGGCCAAAGACAGGGAGCTGTGGGTCAGAGAGCACAAGACGGGCAACATCCGCCCTGTGGACATGGAGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000323816.8
ENST00000396115.6
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000578456.1
ENST00000579158.5
ENST00000580865.5
ENST00000581112.5
ENST00000585266.5
CDS GCA 72 bp TCTGTTTCATGCCGCAGCTGCGTGTACTGGCACAGGTaGTGCCGGATCATCTCTACCCTCTCCACCTCCAGC +
Preference number: 6 (lower is better)
Translates to: SVSCRSCVYWHR*CRIISTLSTSS
Trigger: GCTGGAGGTGGAGAGGGTAGAGATGATCCGGCAGCACCTGTGCCAGTACACGCAGCTGCGGCATGAAACAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000323816.8
ENST00000396115.6
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000578456.1
ENST00000579158.5
ENST00000580865.5
ENST00000581112.5
ENST00000585266.5
CDS CAA 90 bp TCAGGGGGTCTTCAGCCCAGAAGTAGTCGCAGTAGCTCCACTCGGTaGGTTTCAGCAGCTGCTGTTCCGGCATCGTGTCTGGGTGAGGGA +
Preference number: 6 (lower is better)
Translates to: SGGLQPRSSRSSSTR*VSAAAVPASCLGEG
Trigger: TCCCTCACCCAGACACGATGCCGGAACAGCAGCTGCTGAAACCAACCGAGTGGAGCTACTGCGACTACTTCTGGGCTGAAGACCCCCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583882.5
CDS GCA 72 bp GGCTCGACTGTGCTTTGGTTGAACATGTCTGTTTCATaGCGCAGCTGCGTGTACTGGCACAGGTGCTGCCGG +
Preference number: 6 (lower is better)
Translates to: GSTVLWLNMSVS*RSCVYWHRCCR
Trigger: CCGGCAGCACCTGTGCCAGTACACGCAGCTGCGGCATGAAACAGACATGTTCAACCAAAGCACAGTCGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000323816.8
ENST00000396115.6
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000578456.1
ENST00000579158.5
ENST00000580865.5
ENST00000581112.5
ENST00000585266.5
CDS CCA 72 bp CCAGCCTCTGTTTGTTTCAGAGCGGCAAGCACAGCATaGGAGTCAGGGGGTCTTCAGCCCAGAAGTAGTCGC +
Preference number: 6 (lower is better)
Translates to: PASVCFRAASTA*ESGGLQPRSSR
Trigger: GCGACTACTTCTGGGCTGAAGACCCCCTGACTCCCATGCTGTGCTTGCCGCTCTGAAACAAACAGAGGCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583882.5
CDS CAA 90 bp GGTCCTTCTTATCAGCCCAGAAGTAGTCGCAGTAGCTCCACTCGGTaGGTTTCAGCAGCTGCTGTTCCGGCATCGTGTCTGGGTGAGGGA +
Preference number: 6 (lower is better)
Translates to: GPSYQPRSSRSSSTR*VSAAAVPASCLGEG
Trigger: TCCCTCACCCAGACACGATGCCGGAACAGCAGCTGCTGAAACCAACCGAGTGGAGCTACTGCGACTACTTCTGGGCTGATAAGAAGGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000578655.1
ENST00000579140.5
ENST00000579158.5
ENST00000580811.5
ENST00000580865.5
ENST00000581871.5
ENST00000584146.6
ENST00000585266.5
CDS CAA 90 bp CGCATGAGGTCGTCTCCAGCCTGTGTGGACTTTCTCCGCGCCTTCTaGATGTCCTCCTCTGTCTTGTTGCTCAGCTTGATCTCCAGCTGC +
Preference number: 6 (lower is better)
Translates to: RMRSSPACVDFLRAF*MSSSVLLLSLISSC
Trigger: GCAGCTGGAGATCAAGCTGAGCAACAAGACAGAGGAGGACATCAAGAAGGCGCGGAGAAAGTCCACACAGGCTGGAGACGACCTCATGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000578456.1
ENST00000579158.5
ENST00000580865.5
ENST00000585266.5
CDS TCA 72 bp GGTTTCAGCAGCTGCTGTTCCGGCATCGTGTCTGGGTaGGGGAACGTCACACAGTTTATCTTCCCCTCCTGC +
Preference number: 6 (lower is better)
Translates to: GFSSCCSGIVSG*GNVTQFIFPSC
Trigger: GCAGGAGGGGAAGATAAACTGTGTGACGTTCCCTCACCCAGACACGATGCCGGAACAGCAGCTGCTGAAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581871.5
CDS GCA 72 bp GATTTTCGGACACTCATGTGGGCAGTCTCTGGAGGGTaGGCTGGGGTCCCTGATGCGTGGTATCCATTCACT +
Preference number: 6 (lower is better)
Translates to: DFRTLMWAVSGG*AGVPDAWYPFT
Trigger: AGTGAATGGATACCACGCATCAGGGACCCCAGCGCACCCTCCAGAGACTGCCCACATGAGTGTCCGAAAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000323816.8
ENST00000396115.6
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000578599.5
ENST00000579158.5
ENST00000580043.1
ENST00000584146.6
ENST00000584389.5
ENST00000585266.5
CDS GCA 72 bp GCTGTGAAGCTTGGCAGAGAACTTGAGGTGAACTTCTaGTTCGTCCGCCAGGCTCTTCTTCACCTGGGCCCA +
Preference number: 6 (lower is better)
Translates to: AVKLGRELEVNF*FVRQALLHLGP
Trigger: TGGGCCCAGGTGAAGAAGAGCCTGGCGGACGAAGCAGAAGTTCACCTCAAGTTCTCTGCCAAGCTTCACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000579158.5
ENST00000580811.5
ENST00000580865.5
ENST00000581871.5
ENST00000585266.5
CDS CCA 72 bp ATCAGCCCAGAAGTAGTCGCAGTAGCTCCACTCGGTTaGTTTCAGCAGCTGCTGTTCCGGCATCGTGTCTGG +
Preference number: 6 (lower is better)
Translates to: ISPEVVAVAPLG*FQQLLFRHRVW
Trigger: CCAGACACGATGCCGGAACAGCAGCTGCTGAAACCAACCGAGTGGAGCTACTGCGACTACTTCTGGGCTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000578655.1
ENST00000579140.5
ENST00000579158.5
ENST00000580811.5
ENST00000580865.5
ENST00000581871.5
ENST00000584146.6
ENST00000585266.5
CDS CCA 72 bp TTCAGCCCAGAAGTAGTCGCAGTAGCTCCACTCGGTTaGTTTCAGCAGCTGCTGTTCCGGCATCGTGTCTGG +
Preference number: 6 (lower is better)
Translates to: FSPEVVAVAPLG*FQQLLFRHRVW
Trigger: CCAGACACGATGCCGGAACAGCAGCTGCTGAAACCAACCGAGTGGAGCTACTGCGACTACTTCTGGGCTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583882.5
CDS CAA 72 bp CTTCAGCCCAGAAGTAGTCGCAGTAGCTCCACTCGGTaGGTTTCAGCAGCTGCTGTTCCGGCATCGTGTCTG +
Preference number: 6 (lower is better)
Translates to: LQPRSSRSSSTR*VSAAAVPASCL
Trigger: CAGACACGATGCCGGAACAGCAGCTGCTGAAACCAACCGAGTGGAGCTACTGCGACTACTTCTGGGCTGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583882.5
CDS CAA 90 bp TTTCTCCGCGCCTTCTTGATGTCCTCCTCTGTCTTGTTGCTCAGCTaGATCTCCAGCTGCTGGGTCTTCATCTCCAGGTCTCTCTGCCGC +
Preference number: 6 (lower is better)
Translates to: FLRAFLMSSSVLLLS*ISSCWVFISRSLCR
Trigger: GCGGCAGAGAGACCTGGAGATGAAGACCCAGCAGCTGGAGATCAAGCTGAGCAACAAGACAGAGGAGGACATCAAGAAGGCGCGGAGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000578456.1
ENST00000579158.5
ENST00000580865.5
ENST00000585266.5
CDS CAA 90 bp GCCTGTGTGGACTTTCTCCGCGCCTTCTTGATGTCCTCCTCTGTCTaGTTGCTCAGCTTGATCTCCAGCTGCTGGGTCTTCATCTCCAGG +
Preference number: 6 (lower is better)
Translates to: ACVDFLRAFLMSSSV*LLSLISSCWVFISR
Trigger: CCTGGAGATGAAGACCCAGCAGCTGGAGATCAAGCTGAGCAACAAGACAGAGGAGGACATCAAGAAGGCGCGGAGAAAGTCCACACAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000578456.1
ENST00000579158.5
ENST00000580865.5
ENST00000585266.5
CDS TCA 72 bp TCCCTGTCTTTGGCCGGGTCCACTTTTCGAAGCAGCTaGTCCACGGGCTCGACTGTGCTTTGGTTGAACATG +
Preference number: 6 (lower is better)
Translates to: SLSLAGSTFRSS*STGSTVLWLNM
Trigger: CATGTTCAACCAAAGCACAGTCGAGCCCGTGGATCAGCTGCTTCGAAAAGTGGACCCGGCCAAAGACAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000323816.8
ENST00000396115.6
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000578456.1
ENST00000579158.5
ENST00000580865.5
ENST00000581112.5
ENST00000585266.5
CDS TCA 72 bp TCACGGAAGTTCATCAGGGGCTTCTCCACCTCGCTGTaGAGCTGTTGGGAGAGTAGAGACGCACACTCAGGA +
Preference number: 6 (lower is better)
Translates to: SRKFIRGFSTSL*SCWESRDAHSG
Trigger: TCCTGAGTGTGCGTCTCTACTCTCCCAACAGCTTCACAGCGAGGTGGAGAAGCCCCTGATGAACTTCCGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578456.1
CDS GCA 72 bp TCTGGAGCAGTAGTTCAAACCCAGCCACGGTGCCGTTaGCTTGGGGGTCCTTCTTATCAGCCCAGAAGTAGT +
Preference number: 6 (lower is better)
Translates to: SGAVVQTQPRCR*LGGPSYQPRSS
Trigger: ACTACTTCTGGGCTGATAAGAAGGACCCCCAAGGCAACGGCACCGTGGCTGGGTTTGAACTACTGCTCCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000579140.5
ENST00000579158.5
ENST00000580811.5
ENST00000580865.5
ENST00000581871.5
ENST00000584146.6
ENST00000585266.5
CDS GCA 72 bp TCCTCCTCTGTCTTGTTGCTCAGCTTGATCTCCAGCTaGTGGGTCTTCATCTCCAGGTCTCTCTGCCGCTCT +
Preference number: 6 (lower is better)
Translates to: SSSVLLLSLISS*WVFISRSLCRS
Trigger: AGAGCGGCAGAGAGACCTGGAGATGAAGACCCAGCAGCTGGAGATCAAGCTGAGCAACAAGACAGAGGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000578456.1
ENST00000579158.5
ENST00000580865.5
ENST00000585266.5
CDS CCA 72 bp GGTTGGTTTCAGCAGCTGCTGTTCCGGCATCGTGTCTaGGTGAGGGAACGTCACACAGTTTATCTTCCCCTC +
Preference number: 6 (lower is better)
Translates to: GWFQQLLFRHRV*VRERHTVYLPL
Trigger: GAGGGGAAGATAAACTGTGTGACGTTCCCTCACCCAGACACGATGCCGGAACAGCAGCTGCTGAAACCAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581871.5
CDS CAA 72 bp TATCAGCCCAGAAGTAGTCGCAGTAGCTCCACTCGGTaGGTTTCAGCAGCTGCTGTTCCGGCATCGTGTCTG +
Preference number: 6 (lower is better)
Translates to: YQPRSSRSSSTR*VSAAAVPASCL
Trigger: CAGACACGATGCCGGAACAGCAGCTGCTGAAACCAACCGAGTGGAGCTACTGCGACTACTTCTGGGCTGATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000578655.1
ENST00000579140.5
ENST00000579158.5
ENST00000580811.5
ENST00000580865.5
ENST00000581871.5
ENST00000584146.6
ENST00000585266.5
CDS GCA 72 bp GTGCTTTGGTTGAACATGTCTGTTTCATGCCGCAGCTaGGTGTACTGGCACAGGTGCTGCCGGATCATCTCT +
Preference number: 6 (lower is better)
Translates to: VLWLNMSVSCRS*VYWHRCCRIIS
Trigger: AGAGATGATCCGGCAGCACCTGTGCCAGTACACGCAGCTGCGGCATGAAACAGACATGTTCAACCAAAGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000323816.8
ENST00000396115.6
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000578456.1
ENST00000579158.5
ENST00000580865.5
ENST00000581112.5
ENST00000585266.5
CDS CCA 72 bp CGGCTGGCGAGCTGCTTGCGAAGGTCGGCAATGTGGTaGTCGCACTTCTTCATGTCTTTCTTGAAGTTCTCA +
Preference number: 6 (lower is better)
Translates to: RLASCLRRSAMW*SHFFMSFLKFS
Trigger: TGAGAACTTCAAGAAAGACATGAAGAAGTGCGACCACCACATTGCCGACCTTCGCAAGCAGCTCGCCAGCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000578456.1
ENST00000579158.5
ENST00000580865.5
ENST00000585266.5
CDS CCA 72 bp AGCCGTGAGCAAACGCTACTCGCTGGTGTTAATGGGTaGTCGTCAGACACTCGCTTTAGCAGCCAGATCAGA +
Preference number: 6 (lower is better)
Translates to: SREQTLLAGVNG*SSDTRFSSQIR
Trigger: TCTGATCTGGCTGCTAAAGCGAGTGTCTGACGACCACCCATTAACACCAGCGAGTAGCGTTTGCTCACGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396115.6
ENST00000437099.6
CDS CAA 72 bp GACTTTCTCCGCGCCTTCTTGATGTCCTCCTCTGTCTaGTTGCTCAGCTTGATCTCCAGCTGCTGGGTCTTC +
Preference number: 6 (lower is better)
Translates to: DFLRAFLMSSSV*LLSLISSCWVF
Trigger: GAAGACCCAGCAGCTGGAGATCAAGCTGAGCAACAAGACAGAGGAGGACATCAAGAAGGCGCGGAGAAAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000578456.1
ENST00000579158.5
ENST00000580865.5
ENST00000585266.5
CDS CAA 72 bp TCGTCTCCAGCCTGTGTGGACTTTCTCCGCGCCTTCTaGATGTCCTCCTCTGTCTTGTTGCTCAGCTTGATC +
Preference number: 6 (lower is better)
Translates to: SSPACVDFLRAF*MSSSVLLLSLI
Trigger: GATCAAGCTGAGCAACAAGACAGAGGAGGACATCAAGAAGGCGCGGAGAAAGTCCACACAGGCTGGAGACGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000578456.1
ENST00000579158.5
ENST00000580865.5
ENST00000585266.5
CDS CAA 72 bp ACCTCCAGCCGCTCTAGCTCTGTGATGGTGTTTTCCTaGCTCTGCTTTTTGCTTGGCGATGAGGATCCCAGG +
Preference number: 6 (lower is better)
Translates to: TSSRSSSVMVFS*LCFLLGDEDPR
Trigger: CCTGGGATCCTCATCGCCAAGCAAAAAGCAGAGCAAGGAAAACACCATCACAGAGCTAGAGCGGCTGGAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396115.6
CDS CAA 90 bp TGTGTGGACTTTCTCCGCGCCTTCTTGATGTCCTCCTCTGTCTTGTaGCTCAGCTTGATCTCCAGCTGCTGGGTCTTCATCTCCAGGTCT +
Preference number: 6 (lower is better)
Translates to: CVDFLRAFLMSSSVL*LSLISSCWVFISRS
Trigger: AGACCTGGAGATGAAGACCCAGCAGCTGGAGATCAAGCTGAGCAACAAGACAGAGGAGGACATCAAGAAGGCGCGGAGAAAGTCCACACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000578456.1
ENST00000579158.5
ENST00000580865.5
ENST00000585266.5
CDS CAA 90 bp TCCAGCCGCTCTAGCTCTGTGATGGTGTTTTCCTTGCTCTGCTTTTaGCTTGGCGATGAGGATCCCAGGTTCTGGGAATCACCGGTGGAT +
Preference number: 6 (lower is better)
Translates to: SSRSSSVMVFSLLCF*LGDEDPRFWESPVD
Trigger: ATCCACCGGTGATTCCCAGAACCTGGGATCCTCATCGCCAAGCAAAAAGCAGAGCAAGGAAAACACCATCACAGAGCTAGAGCGGCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396115.6
CDS TCA 72 bp GGTTTCAGCAGCTGCTGTTCCGGCATCGTGTCTGGGTaGGGGAACGTCACACAGTTTATCATCAGAGAACAG +
Preference number: 6 (lower is better)
Translates to: GFSSCCSGIVSG*GNVTQFIIREQ
Trigger: CTGTTCTCTGATGATAAACTGTGTGACGTTCCCTCACCCAGACACGATGCCGGAACAGCAGCTGCTGAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579140.5
CDS GCA 72 bp AGCCGCTCTAGCTCTGTGATGGTGTTTTCCTTGCTCTaGTTTTTGCTTGGCGATGAGGATCCCAGGTTCTGG +
Preference number: 6 (lower is better)
Translates to: SRSSSVMVFSLL*FLLGDEDPRFW
Trigger: CCAGAACCTGGGATCCTCATCGCCAAGCAAAAAGCAGAGCAAGGAAAACACCATCACAGAGCTAGAGCGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396115.6
CDS GCA 72 bp GTGTTCTGGGCACCCCAGCGGAGGTTCCTGTGGCTTTaGTCATTGCTGTTCTTTCACAAAGAACCCACTACA +
Preference number: 6 (lower is better)
Translates to: VFWAPQRRFLWL*SLLFFHKEPTT
Trigger: TGTAGTGGGTTCTTTGTGAAAGAACAGCAATGAGCAAAGCCACAGGAACCTCCGCTGGGGTGCCCAGAACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000579140.5
ENST00000580043.1
ENST00000585266.5
CDS CCA 72 bp CATTCCAGGCTTCATGGCTCGTCTTGCGTTCAATCTTaGGGAGACCGAGGTGACACAGCCAGCATCCTAAAT +
Preference number: 6 (lower is better)
Translates to: HSRLHGSSCVQS*GDRGDTASILN
Trigger: ATTTAGGATGCTGGCTGTGTCACCTCGGTCTCCCCAAGATTGAACGCAAGACGAGCCATGAAGCCTGGAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323816.8
CDS CCA 72 bp GGTTGGTTTCAGCAGCTGCTGTTCCGGCATCGTGTCTaGGTGAGGGAACGTCACACAGTTTATTGTGATGGT +
Preference number: 6 (lower is better)
Translates to: GWFQQLLFRHRV*VRERHTVYCDG
Trigger: ACCATCACAATAAACTGTGTGACGTTCCCTCACCCAGACACGATGCCGGAACAGCAGCTGCTGAAACCAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000578599.5
ENST00000578655.1
ENST00000579158.5
ENST00000580811.5
ENST00000580865.5
ENST00000583882.5
ENST00000584146.6
ENST00000585266.5
CDS CCA 72 bp GCTCCAATGTGGTGGTCACCATCTCTTCAAACCATTTaGACTGGGCCTGGTTGTAGAGATCCACACAGCGCA +
Preference number: 6 (lower is better)
Translates to: APMWWSPSLQTI*TGPGCRDPHSA
Trigger: TGCGCTGTGTGGATCTCTACAACCAGGCCCAGTCCAAATGGTTTGAAGAGATGGTGACCACCACATTGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000578456.1
ENST00000579158.5
ENST00000580865.5
ENST00000581112.5
ENST00000585266.5
CDS CCA 72 bp GGTTGGTTTCAGCAGCTGCTGTTCCGGCATCGTGTCTaGGTGAGGGAACGTCACACAGTTTATCATCAGAGA +
Preference number: 6 (lower is better)
Translates to: GWFQQLLFRHRV*VRERHTVYHQR
Trigger: TCTCTGATGATAAACTGTGTGACGTTCCCTCACCCAGACACGATGCCGGAACAGCAGCTGCTGAAACCAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579140.5
CDS CCA 72 bp AGGCTTCCAGAACAACAACTTCAAAGCCACTTTGCGTaGTTGCTGGCTCCGAAGCCACACAGAGATGACGGA +
Preference number: 6 (lower is better)
Translates to: RLPEQQLQSHFA*LLAPKPHRDDG
Trigger: TCCGTCATCTCTGTGTGGCTTCGGAGCCAGCAACCACGCAAAGTGGCTTTGAAGTTGTTGTTCTGGAAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584389.5
CDS CAA 72 bp TTTCTCCGCGCCTTCTTGATGTCCTCCTCTGTCTTGTaGCTCAGCTTGATCTCCAGCTGCTGGGTCTTCATC +
Preference number: 6 (lower is better)
Translates to: FLRAFLMSSSVL*LSLISSCWVFI
Trigger: GATGAAGACCCAGCAGCTGGAGATCAAGCTGAGCAACAAGACAGAGGAGGACATCAAGAAGGCGCGGAGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000578456.1
ENST00000579158.5
ENST00000580865.5
ENST00000585266.5
CDS CAA 72 bp AGTGTTCTGGGCACCCCAGCGGAGGTTCCTGTGGCTTaGCTCATTGCTGTTCTTTCACAAAGAACCCACTAC +
Preference number: 6 (lower is better)
Translates to: SVLGTPAEVPVA*LIAVLSQRTHY
Trigger: GTAGTGGGTTCTTTGTGAAAGAACAGCAATGAGCAAAGCCACAGGAACCTCCGCTGGGGTGCCCAGAACACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000579140.5
ENST00000580043.1
ENST00000585266.5
CDS CAA 90 bp TTGCGAAGGTCGGCAATGTGGTGGTCGCACTTCTTCATGTCTTTCTaGAAGTTCTCACGGAAGTTCATCAGGGGCTTCTCCACCTCGCTG +
Preference number: 6 (lower is better)
Translates to: LRRSAMWWSHFFMSF*KFSRKFIRGFSTSL
Trigger: CAGCGAGGTGGAGAAGCCCCTGATGAACTTCCGTGAGAACTTCAAGAAAGACATGAAGAAGTGCGACCACCACATTGCCGACCTTCGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000578456.1
ENST00000579158.5
ENST00000580865.5
ENST00000581871.5
ENST00000585266.5
CDS TCA 72 bp GGTTTCAGCAGCTGCTGTTCCGGCATCGTGTCTGGGTaGGGGAACGTCACACAGTTTATTGTGATGGTGTTT +
Preference number: 6 (lower is better)
Translates to: GFSSCCSGIVSG*GNVTQFIVMVF
Trigger: AAACACCATCACAATAAACTGTGTGACGTTCCCTCACCCAGACACGATGCCGGAACAGCAGCTGCTGAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000578599.5
ENST00000578655.1
ENST00000579158.5
ENST00000580811.5
ENST00000580865.5
ENST00000583882.5
ENST00000584146.6
ENST00000585266.5
CDS TCA 72 bp GGCTTCTCAGCCTTGTGGTGTGTCCTTATGCAAATCTaGCACGCTGGTCATTTTCTGCCACCATCCCCACAT +
Preference number: 6 (lower is better)
Translates to: GFSALWCVLMQI*HAGHFLPPSPH
Trigger: ATGTGGGGATGGTGGCAGAAAATGACCAGCGTGTCAGATTTGCATAAGGACACACCACAAGGCTGAGAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578599.5
CDS GCA 72 bp GGGCACCCCAGCGGAGGTTCCTGTGGCTTTGCTCATTaGTGTTCTTTCACAAAGAACCCACTACATTGCATA +
Preference number: 6 (lower is better)
Translates to: GHPSGGSCGFAH*CSFTKNPLHCI
Trigger: TATGCAATGTAGTGGGTTCTTTGTGAAAGAACAGCAATGAGCAAAGCCACAGGAACCTCCGCTGGGGTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579140.5
ENST00000585266.5
CDS CAA 72 bp TGGGCACCCCAGCGGAGGTTCCTGTGGCTTTGCTCATaGCTGTTCTTTCACAAAGAACCCACTACATTGCAT +
Preference number: 6 (lower is better)
Translates to: WAPQRRFLWLCS*LFFHKEPTTLH
Trigger: ATGCAATGTAGTGGGTTCTTTGTGAAAGAACAGCAATGAGCAAAGCCACAGGAACCTCCGCTGGGGTGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579140.5
ENST00000585266.5
CDS CAA 72 bp ATTCCAGGCTTCCAGAACAACAACTTCAAAGCCACTTaGCGTGGTTGCTGGCTCCGAAGCCACACAGAGATG +
Preference number: 6 (lower is better)
Translates to: IPGFQNNNFKAT*RGCWLRSHTEM
Trigger: CATCTCTGTGTGGCTTCGGAGCCAGCAACCACGCAAAGTGGCTTTGAAGTTGTTGTTCTGGAAGCCTGGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584389.5
CDS CAA 90 bp CATTCCAGGCTTCCAGAACAACAACTTCAAAGCCACTTTGCGTGGTaGCTGGCTCCGAAGCCACACAGAGATGACGGATTACAAGGAAGA +
Preference number: 6 (lower is better)
Translates to: HSRLPEQQLQSHFAW*LAPKPHRDDGLQGR
Trigger: TCTTCCTTGTAATCCGTCATCTCTGTGTGGCTTCGGAGCCAGCAACCACGCAAAGTGGCTTTGAAGTTGTTGTTCTGGAAGCCTGGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584389.5
CDS TCA 72 bp CGGCAATGTGGTGGTCGCACTTCTTCATGTCTTTCTTaGAGTTCTCACGGAAGTTCATCAGGGGCTTCTCCA +
Preference number: 6 (lower is better)
Translates to: RQCGGRTSSCLS*SSHGSSSGASP
Trigger: TGGAGAAGCCCCTGATGAACTTCCGTGAGAACTTCAAGAAAGACATGAAGAAGTGCGACCACCACATTGCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000578456.1
ENST00000579158.5
ENST00000580865.5
ENST00000581871.5
ENST00000585266.5
CDS GCA 72 bp TTCCAGAACAACAACTTCAAAGCCACTTTGCGTGGTTaGTGGCTCCGAAGCCACACAGAGATGACGGATTAC +
Preference number: 6 (lower is better)
Translates to: FQNNNFKATLRG*WLRSHTEMTDY
Trigger: GTAATCCGTCATCTCTGTGTGGCTTCGGAGCCAGCAACCACGCAAAGTGGCTTTGAAGTTGTTGTTCTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584389.5
CDS CCA 72 bp ATTTCCTTCTGCATTTGTTTGCCCTTCAGCTGTTTCTaGAGCAGTAGTTCAAACCCAGCCACGGTGCCGTTG +
Preference number: 6 (lower is better)
Translates to: ISFCICLPFSCF*SSSSNPATVPL
Trigger: CAACGGCACCGTGGCTGGGTTTGAACTACTGCTCCAGAAACAGCTGAAGGGCAAACAAATGCAGAAGGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000579140.5
ENST00000579158.5
ENST00000580811.5
ENST00000580865.5
ENST00000581871.5
ENST00000584146.6
ENST00000585266.5
CDS CCA 72 bp CAGAACAACAACTTCAAAGCCACTTTGCGTGGTTGCTaGCTCCGAAGCCACACAGAGATGACGGATTACAAG +
Preference number: 6 (lower is better)
Translates to: QNNNFKATLRGC*LRSHTEMTDYK
Trigger: CTTGTAATCCGTCATCTCTGTGTGGCTTCGGAGCCAGCAACCACGCAAAGTGGCTTTGAAGTTGTTGTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584389.5
CDS CCA 72 bp CATTCCAGGCTTCCAGTAGTTATGCAGGAGACAGGCTaGACCCCGGCAGAGTCTTCATTTTCTTCTAAAGGT +
Preference number: 6 (lower is better)
Translates to: HSRLPVVMQETG*TPAESSFSSKG
Trigger: ACCTTTAGAAGAAAATGAAGACTCTGCCGGGGTCCAGCCTGTCTCCTGCATAACTACTGGAAGCCTGGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584146.6
CDS CAA 72 bp CTTCCAGAACAACAACTTCAAAGCCACTTTGCGTGGTaGCTGGCTCCGAAGCCACACAGAGATGACGGATTA +
Preference number: 6 (lower is better)
Translates to: LPEQQLQSHFAW*LAPKPHRDDGL
Trigger: TAATCCGTCATCTCTGTGTGGCTTCGGAGCCAGCAACCACGCAAAGTGGCTTTGAAGTTGTTGTTCTGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584389.5
CDS CAA 72 bp GGGAACGTCACACAGTTTATTGTGATGGTGTTTTCCTaGCTCTGCTTTTTGCTTGGCGATGAGGATCCCAGG +
Preference number: 6 (lower is better)
Translates to: GNVTQFIVMVFS*LCFLLGDEDPR
Trigger: CCTGGGATCCTCATCGCCAAGCAAAAAGCAGAGCAAGGAAAACACCATCACAATAAACTGTGTGACGTTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000578599.5
ENST00000578655.1
ENST00000579158.5
ENST00000580811.5
ENST00000580865.5
ENST00000583882.5
ENST00000584146.6
ENST00000584389.5
ENST00000585266.5
CDS CAA 72 bp TCTAGCTCTGTGATGGTGTTTTCCTTGCTCTGCTTTTaGCTTGGCGATGAGGATCCCAGGTTCTGGGAATCA +
Preference number: 6 (lower is better)
Translates to: SSSVMVFSLLCF*LGDEDPRFWES
Trigger: TGATTCCCAGAACCTGGGATCCTCATCGCCAAGCAAAAAGCAGAGCAAGGAAAACACCATCACAGAGCTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396115.6
CDS CAA 90 bp AACGTCACACAGTTTATTGTGATGGTGTTTTCCTTGCTCTGCTTTTaGCTTGGCGATGAGGATCCCAGGTTCTGGGAATCACCGGTGGAT +
Preference number: 6 (lower is better)
Translates to: NVTQFIVMVFSLLCF*LGDEDPRFWESPVD
Trigger: ATCCACCGGTGATTCCCAGAACCTGGGATCCTCATCGCCAAGCAAAAAGCAGAGCAAGGAAAACACCATCACAATAAACTGTGTGACGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000578599.5
ENST00000579158.5
ENST00000584146.6
ENST00000584389.5
ENST00000585266.5
CDS CAA 90 bp AACGTCACACAGTTTATTGTGATGGTGTTTTCCTTGCTCTGCTTTTaGCTTGGCGATGAGGATCCCAGGTTCTGTTGGAGGCAGAGAGCT +
Preference number: 6 (lower is better)
Translates to: NVTQFIVMVFSLLCF*LGDEDPRFCWRQRA
Trigger: AGCTCTCTGCCTCCAACAGAACCTGGGATCCTCATCGCCAAGCAAAAAGCAGAGCAAGGAAAACACCATCACAATAAACTGTGTGACGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578655.1
CDS CAA 90 bp AACGTCACACAGTTTATTGTGATGGTGTTTTCCTTGCTCTGCTTTTaGCTTGGCGATGAGGATCCCAGGTTCATATTCTGGGCCAGGGCA +
Preference number: 6 (lower is better)
Translates to: NVTQFIVMVFSLLCF*LGDEDPRFIFWARA
Trigger: TGCCCTGGCCCAGAATATGAACCTGGGATCCTCATCGCCAAGCAAAAAGCAGAGCAAGGAAAACACCATCACAATAAACTGTGTGACGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580811.5
CDS CAA 72 bp CAGTTTATTGTGATGGTGTTTTCCTTGCTCTGCTTTTaGCTTGGCGATGAGGATCCCAGGTTCTGTTGGAGG +
Preference number: 6 (lower is better)
Translates to: QFIVMVFSLLCF*LGDEDPRFCWR
Trigger: CCTCCAACAGAACCTGGGATCCTCATCGCCAAGCAAAAAGCAGAGCAAGGAAAACACCATCACAATAAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578655.1
CDS CAA 90 bp CTGTGGCTTTGCTCATTGCTGTTCTTTCACAAAGAACCCACTACATaGCATAGTTCCTTCCAAATCCGCTCCAGTGCTTGCTGGGAAATT +
Preference number: 6 (lower is better)
Translates to: LWLCSLLFFHKEPTT*HSSFQIRSSACWEI
Trigger: AATTTCCCAGCAAGCACTGGAGCGGATTTGGAAGGAACTATGCAATGTAGTGGGTTCTTTGTGAAAGAACAGCAATGAGCAAAGCCACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585266.5
CDS CAA 72 bp CAGTTTATTGTGATGGTGTTTTCCTTGCTCTGCTTTTaGCTTGGCGATGAGGATCCCAGGTTCTGGGAATCA +
Preference number: 6 (lower is better)
Translates to: QFIVMVFSLLCF*LGDEDPRFWES
Trigger: TGATTCCCAGAACCTGGGATCCTCATCGCCAAGCAAAAAGCAGAGCAAGGAAAACACCATCACAATAAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000323816.8
ENST00000432992.7
ENST00000437099.6
ENST00000542249.5
ENST00000578599.5
ENST00000579158.5
ENST00000584146.6
ENST00000584389.5
ENST00000585266.5
CDS CAA 72 bp TGCTCATTGCTGTTCTTTCACAAAGAACCCACTACATaGCATAGTTCCTTCCAAATCCGCTCCAGTGCTTGC +
Preference number: 6 (lower is better)
Translates to: CSLLFFHKEPTT*HSSFQIRSSAC
Trigger: GCAAGCACTGGAGCGGATTTGGAAGGAACTATGCAATGTAGTGGGTTCTTTGTGAAAGAACAGCAATGAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579140.5
ENST00000585266.5
CDS CAA 72 bp CAGTTTATTGTGATGGTGTTTTCCTTGCTCTGCTTTTaGCTTGGCGATGAGGATCCCAGGTTCATATTCTGG +
Preference number: 6 (lower is better)
Translates to: QFIVMVFSLLCF*LGDEDPRFIFW
Trigger: CCAGAATATGAACCTGGGATCCTCATCGCCAAGCAAAAAGCAGAGCAAGGAAAACACCATCACAATAAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580811.5