Pregenerated sensors for GAS6-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000272695Ensembl transcript IDs: ENST00000608651.1, ENST00000655351.1, ENST00000669254.1
Found 20 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | AGAAGCCCAGGGGTACTCCTTACTCCGCCTGCTCCAGTAACTAGCTaGCATGGAAGTGCCTCGTCATTCTGGTTCAGACACAGGTGCAGA | + |
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Preference number: 5 (lower is better) Translates to: RSPGVLLTPPAPVTS*HGSASSFWFRHRCR Trigger: TCTGCACCTGTGTCTGAACCAGAATGACGAGGCACTTCCATGTCAGCTAGTTACTGGAGCAGGCGGAGTAAGGAGTACCCCTGGGCTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000608651.1 ENST00000655351.1 ENST00000669254.1 |
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| CDS CCA 90 bp | ATGGCCACAGACCGGTTAACCATCCATATAAAACATCCATTGCCCTaGGTCCAACCTCCTGCCCCCTGTGGAGGTGAACTGTCTACTTCA | + |
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Preference number: 5 (lower is better) Translates to: MATDRLTIHIKHPLP*VQPPAPCGGELSTS Trigger: TGAAGTAGACAGTTCACCTCCACAGGGGGCAGGAGGTTGGACCCAGGGCAATGGATGTTTTATATGGATGGTTAACCGGTCTGTGGCCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000608651.1 ENST00000655351.1 ENST00000669254.1 |
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| CDS TCA 90 bp | ATGGAAGTGCCTCGTCATTCTGGTTCAGACACAGGTGCAGATAGATaGCTTCTCTATCCCACTTTAATTCTCCTTGAAGATCATTCCCAG | + |
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Preference number: 5 (lower is better) Translates to: MEVPRHSGSDTGADR*LLYPTLILLEDHSQ Trigger: CTGGGAATGATCTTCAAGGAGAATTAAAGTGGGATAGAGAAGTCATCTATCTGCACCTGTGTCTGAACCAGAATGACGAGGCACTTCCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000608651.1 ENST00000655351.1 ENST00000669254.1 |
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| CDS TCA 90 bp | TTTCCATTTCTGCCTTCGAACGAATTTCCTGCACTGGTAACTAGGTaGAGAATTTTGGAGTTATCTGGGGTAATGGAGACATCCTCCATT | + |
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Preference number: 5 (lower is better) Translates to: FPFLPSNEFPALVTR*RILELSGVMETSSI Trigger: AATGGAGGATGTCTCCATTACCCCAGATAACTCCAAAATTCTTCACCTAGTTACCAGTGCAGGAAATTCGTTCGAAGGCAGAAATGGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000608651.1 ENST00000655351.1 ENST00000669254.1 |
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| CDS CAA 72 bp | GCCACAGACCGGTTAACCATCCATATAAAACATCCATaGCCCTGGGTCCAACCTCCTGCCCCCTGTGGAGGT | + |
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Preference number: 6 (lower is better) Translates to: ATDRLTIHIKHP*PWVQPPAPCGG Trigger: ACCTCCACAGGGGGCAGGAGGTTGGACCCAGGGCAATGGATGTTTTATATGGATGGTTAACCGGTCTGTGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000608651.1 ENST00000655351.1 ENST00000669254.1 |
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| CDS CAA 90 bp | CTGGGCAACATAGCGAGACTCCGTCTGCTCAAGTTGAACCAGGTATaGCGTCCTCCTTTTACCCCATCGCTAGTGAAGACAACCACCGCC | + |
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Preference number: 6 (lower is better) Translates to: LGNIARLRLLKLNQV*RPPFTPSLVKTTTA Trigger: GGCGGTGGTTGTCTTCACTAGCGATGGGGTAAAAGGAGGACGCAATACCTGGTTCAACTTGAGCAGACGGAGTCTCGCTATGTTGCCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000608651.1 ENST00000655351.1 ENST00000669254.1 |
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| CDS CAA 90 bp | CACCTCATGGCCACAGACCGGTTAACCATCCATATAAAACATCCATaGCCCTGGGTCCAACCTCCTGCCCCCTGTGGAGGTGAACTGTCT | + |
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Preference number: 6 (lower is better) Translates to: HLMATDRLTIHIKHP*PWVQPPAPCGGELS Trigger: AGACAGTTCACCTCCACAGGGGGCAGGAGGTTGGACCCAGGGCAATGGATGTTTTATATGGATGGTTAACCGGTCTGTGGCCATGAGGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000608651.1 ENST00000655351.1 ENST00000669254.1 |
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| CDS TCA 72 bp | GGGGTACTCCTTACTCCGCCTGCTCCAGTAACTAGCTaGCATGGAAGTGCCTCGTCATTCTGGTTCAGACAC | + |
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Preference number: 6 (lower is better) Translates to: GVLLTPPAPVTS*HGSASSFWFRH Trigger: GTGTCTGAACCAGAATGACGAGGCACTTCCATGTCAGCTAGTTACTGGAGCAGGCGGAGTAAGGAGTACCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000608651.1 ENST00000655351.1 ENST00000669254.1 |
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| CDS CCA 72 bp | GACCGGTTAACCATCCATATAAAACATCCATTGCCCTaGGTCCAACCTCCTGCCCCCTGTGGAGGTGAACTG | + |
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Preference number: 6 (lower is better) Translates to: DRLTIHIKHPLP*VQPPAPCGGEL Trigger: CAGTTCACCTCCACAGGGGGCAGGAGGTTGGACCCAGGGCAATGGATGTTTTATATGGATGGTTAACCGGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000608651.1 ENST00000655351.1 ENST00000669254.1 |
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| CDS CAA 72 bp | ATAGCGAGACTCCGTCTGCTCAAGTTGAACCAGGTATaGCGTCCTCCTTTTACCCCATCGCTAGTGAAGACA | + |
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Preference number: 6 (lower is better) Translates to: IARLRLLKLNQV*RPPFTPSLVKT Trigger: TGTCTTCACTAGCGATGGGGTAAAAGGAGGACGCAATACCTGGTTCAACTTGAGCAGACGGAGTCTCGCTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000608651.1 ENST00000655351.1 ENST00000669254.1 |
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| CDS CCA 72 bp | AAGTTGGTCAGCGGTTTTTGCATAGAAACTGGGATGTaGGGTAGGGTGGGGACATTTAGGAGGGAGGAATTA | + |
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Preference number: 6 (lower is better) Translates to: KLVSGFCIETGM*GRVGTFRREEL Trigger: TAATTCCTCCCTCCTAAATGTCCCCACCCTACCCCACATCCCAGTTTCTATGCAAAAACCGCTGACCAACTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000608651.1 ENST00000655351.1 ENST00000669254.1 |
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| CDS CAA 72 bp | ATGAACAGGCAGAGGCTAGAGATGCTCATTCACTCTTaGAAGTTTATCCATGGGCTGCTGGAACCCTTAGGA | + |
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Preference number: 6 (lower is better) Translates to: MNRQRLEMLIHS*KFIHGLLEPLG Trigger: TCCTAAGGGTTCCAGCAGCCCATGGATAAACTTCAAAGAGTGAATGAGCATCTCTAGCCTCTGCCTGTTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655351.1 |
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| CDS CAA 90 bp | TTGTCCCAGATGAACAGGCAGAGGCTAGAGATGCTCATTCACTCTTaGAAGTTTATCCATGGGCTGCTGGAACCCTTAGGAAATAATAGC | + |
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Preference number: 6 (lower is better) Translates to: LSQMNRQRLEMLIHS*KFIHGLLEPLGNNS Trigger: GCTATTATTTCCTAAGGGTTCCAGCAGCCCATGGATAAACTTCAAAGAGTGAATGAGCATCTCTAGCCTCTGCCTGTTCATCTGGGACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655351.1 |
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| CDS TCA 72 bp | CTGCCTTCGAACGAATTTCCTGCACTGGTAACTAGGTaGAGAATTTTGGAGTTATCTGGGGTAATGGAGACA | + |
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Preference number: 6 (lower is better) Translates to: LPSNEFPALVTR*RILELSGVMET Trigger: TGTCTCCATTACCCCAGATAACTCCAAAATTCTTCACCTAGTTACCAGTGCAGGAAATTCGTTCGAAGGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000608651.1 ENST00000655351.1 ENST00000669254.1 |
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| CDS GCA 72 bp | TTTGGAGTTATCTGGGGTAATGGAGACATCCTCCATTaGACCGCATATTTGCTTTCTGTATTCCCCAGTTAT | + |
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Preference number: 6 (lower is better) Translates to: FGVIWGNGDILH*TAYLLSVFPSY Trigger: ATAACTGGGGAATACAGAAAGCAAATATGCGGTGCAATGGAGGATGTCTCCATTACCCCAGATAACTCCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000608651.1 ENST00000655351.1 ENST00000669254.1 |
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| CDS CAA 72 bp | CAGAAAATACGAACAATTTTTAGGAGCTTACACTCTTaGAAGTTTATCCATGGGCTGCTGGAACCCTTAGGA | + |
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Preference number: 6 (lower is better) Translates to: QKIRTIFRSLHS*KFIHGLLEPLG Trigger: TCCTAAGGGTTCCAGCAGCCCATGGATAAACTTCAAAGAGTGTAAGCTCCTAAAAATTGTTCGTATTTTCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000608651.1 ENST00000669254.1 |
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| CDS CAA 90 bp | TTCCCCAGTTATAGAAATCAAAACGAGCAGTTGTATGTGAATGCATaGTATCAAACCAAGTCTCTAGATGATAGGAGGCATTGTCATTAC | + |
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Preference number: 6 (lower is better) Translates to: FPSYRNQNEQLYVNA*YQTKSLDDRRHCHY Trigger: GTAATGACAATGCCTCCTATCATCTAGAGACTTGGTTTGATACAATGCATTCACATACAACTGCTCGTTTTGATTTCTATAACTGGGGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000608651.1 ENST00000655351.1 ENST00000669254.1 |
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| CDS CAA 90 bp | TATTTGCTTTCTGTATTCCCCAGTTATAGAAATCAAAACGAGCAGTaGTATGTGAATGCATTGTATCAAACCAAGTCTCTAGATGATAGG | + |
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Preference number: 6 (lower is better) Translates to: YLLSVFPSYRNQNEQ*YVNALYQTKSLDDR Trigger: CCTATCATCTAGAGACTTGGTTTGATACAATGCATTCACATACAACTGCTCGTTTTGATTTCTATAACTGGGGAATACAGAAAGCAAATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000608651.1 ENST00000655351.1 ENST00000669254.1 |
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| CDS CAA 72 bp | TATAGAAATCAAAACGAGCAGTTGTATGTGAATGCATaGTATCAAACCAAGTCTCTAGATGATAGGAGGCAT | + |
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Preference number: 6 (lower is better) Translates to: YRNQNEQLYVNA*YQTKSLDDRRH Trigger: ATGCCTCCTATCATCTAGAGACTTGGTTTGATACAATGCATTCACATACAACTGCTCGTTTTGATTTCTATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000608651.1 ENST00000655351.1 ENST00000669254.1 |
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| CDS CAA 72 bp | TCTGTATTCCCCAGTTATAGAAATCAAAACGAGCAGTaGTATGTGAATGCATTGTATCAAACCAAGTCTCTA | + |
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Preference number: 6 (lower is better) Translates to: SVFPSYRNQNEQ*YVNALYQTKSL Trigger: TAGAGACTTGGTTTGATACAATGCATTCACATACAACTGCTCGTTTTGATTTCTATAACTGGGGAATACAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000608651.1 ENST00000655351.1 ENST00000669254.1 |
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