RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GAS6 (Homo sapiens)

Ensembl gene IDs: ENSG00000183087

Ensembl transcript IDs: ENST00000327773.7, ENST00000476291.1, ENST00000480426.5, ENST00000608763.1, ENST00000610073.1

Found 262 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp ACGGCTGAGTGCGCGGCGTCAGAGGCCCCAAGTCCATCTCACTATTTACAGATACATGGCCCCACGTGGTaGGGAGCCCCCAGGCTCCTC +
Preference number: 2 (lower is better)
Translates to: TAECAASEAPSPSHYLQIHGPTW*GAPRLL
Trigger: GAGGAGCCTGGGGGCTCCTCACCACGTGGGGCCATG...TATCTGTAAATAGTGAGATGGACTTGGGGCCTCTGACGCCGCGCACTCAGCCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327773.7
3UTR-3UTR CCA 90 bp CCACGGCTGAGTGCGCGGCGTCAGAGGCCCCAAGTCCATCTCACTATTTACAGAGCCCAGCTCTCAGCATaGCCCCACGTGGTGAGGAGC +
Preference number: 2 (lower is better)
Translates to: PRLSARRQRPQVHLTIYRAQLSA*PHVVRS
Trigger: GCTCCTCACCACGTGGGGCCATGCTGAGAGCTGGGC...TCTGTAAATAGTGAGATGGACTTGGGGCCTCTGACGCCGCGCACTCAGCCGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327773.7
3UTR CCA 72 bp CCGGGATGGTCACAGAGGAAAGCCCAGCTCTCAGCATaGCCCCACGTGGTGAGGAGCCCCCAGGCTCCTCCC +
Preference number: 3 (lower is better)
Translates to: PGWSQRKAQLSA*PHVVRSPQAPP
Trigger: GGGAGGAGCCTGGGGGCTCCTCACCACGTGGGGCCATGCTGAGAGCTGGGCTTTCCTCTGTGACCATCCCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS-3UTR TCA 90 bp AGGAGCCCCCAGGCTCCTCCCGGCTGTCTCGGACAGAGACTGAGAAGCCTGCCGCCGTCCTGGCGGCCCTaGAGGTCACATCGCGGCGGC +
Preference number: 4 (lower is better)
Translates to: RSPQAPPGCLGQRLRSLPPSWRP*RSHRGG
Trigger: GCCGCCGCGATGTGACCTTCAGGGCCGCCAGGACGG...CGGCAGGCTTCTCAGTCTCTGTCCGAGACAGCCGGGAGGAGCCTGGGGGCTCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS-3UTR TCA 90 bp CCCCAGGCTCCTCCCGGCTGTCTCGGACAGAGACTGAGAAGCCTGCCGCGTCCCCATGGCCCCACGTGGTaGGGAGCCCCCAGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: PQAPPGCLGQRLRSLPRPHGPTW*GAPRLL
Trigger: GAGGAGCCTGGGGGCTCCTCACCACGTGGGGCCATG...GGGACGCGGCAGGCTTCTCAGTCTCTGTCCGAGACAGCCGGGAGGAGCCTGGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS-3UTR TCA 90 bp AGGAGCCCCCAGGCTCCTCCCGGCTGTCTCGGACAGAGACTGAGAAGCCTGCCGTGTCCTGGGACAGCTTaGGGCCCCCACGCCCGTCAC +
Preference number: 4 (lower is better)
Translates to: RSPQAPPGCLGQRLRSLPCPGTA*GPHARH
Trigger: GTGACGGGCGTGGGGGCCTCAAGCTGTCCCAGGACA...CGGCAGGCTTCTCAGTCTCTGTCCGAGACAGCCGGGAGGAGCCTGGGGGCTCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS-3UTR CCA 90 bp CCCCAGGCTCCTCCCGGCTGTCTCGGACAGAGACTGAGAAGCCTGCCGCGTCCCGCCCAGCTCTCAGCATaGCCCCACGTGGTGAGGAGC +
Preference number: 4 (lower is better)
Translates to: PQAPPGCLGQRLRSLPRPAQLSA*PHVVRS
Trigger: GCTCCTCACCACGTGGGGCCATGCTGAGAGCTGGGC...GGGACGCGGCAGGCTTCTCAGTCTCTGTCCGAGACAGCCGGGAGGAGCCTGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS-3UTR CCA 90 bp AGGAGCCCCCAGGCTCCTCCCGGCTGTCTCGGACAGAGACTGAGAAGCCTGCCGGCCTGTGTCTGCGGCTaGGCGGATGTGAGCCACGAC +
Preference number: 4 (lower is better)
Translates to: RSPQAPPGCLGQRLRSLPACVCG*ADVSHD
Trigger: GTCGTGGCTCACATCCGCCCAGCCGCAGACACAGGC...CGGCAGGCTTCTCAGTCTCTGTCCGAGACAGCCGGGAGGAGCCTGGGGGCTCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS-3UTR TCA 90 bp AGGAGCCCCCAGGCTCCTCCCGGCTGTCTCGGACAGAGACTGAGAAGCCTGCCGTCACGGGGGTCCCACTaGACATCCGGCCCAGGTACA +
Preference number: 4 (lower is better)
Translates to: RSPQAPPGCLGQRLRSLPSRGSH*TSGPGT
Trigger: TGTACCTGGGCCGGATGTTCAGTGGGACCCCCGTGA...CGGCAGGCTTCTCAGTCTCTGTCCGAGACAGCCGGGAGGAGCCTGGGGGCTCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS-3UTR GCA 90 bp CCCCAGGCTCCTCCCGGCTGTCTCGGACAGAGACTGAGAAGCCTGCCGCGTCCCACCAGCCTGGTGGGCTaGAGCCTCTTGAAGCGCAGT +
Preference number: 4 (lower is better)
Translates to: PQAPPGCLGQRLRSLPRPTSLVG*SLLKRS
Trigger: ACTGCGCTTCAAGAGGCTGCAGCCCACCAGGCTGGT...GGGACGCGGCAGGCTTCTCAGTCTCTGTCCGAGACAGCCGGGAGGAGCCTGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS-3UTR GCA 90 bp AATAGAGAATTATTTTCTTCGAGCCCGCTCTGCGCTGCGCCGGCCTCCCCGCGCTCTTCGAGCCCGCTCTaGGCTGCGCCGGCCTCCCCG +
Preference number: 4 (lower is better)
Translates to: NRELFSSSPLCAAPASPRSSSPL*AAPASP
Trigger: CGGGGAGGCCGGCGCAGCGCAGAGCGGGCTCGAAGA...GCGCGGGGAGGCCGGCGCAGCGCAGAGCGGGCTCGAAGAAAATAATTCTCTATT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS-3UTR CCA 90 bp ATAGAGAATTATTTTCTTCGAGCCCGCTCTGCGCTGCGCCGGCCTCCCCGCGCCGCCGCAGGAACTGCGTaGCCTCGCGCGCCGGCAACA +
Preference number: 4 (lower is better)
Translates to: IENYFLRARSALRRPPRAAAGTA*PRAPAT
Trigger: TGTTGCCGGCGCGCGAGGCCACGCAGTTCCTGCGGC...GGCGCGGGGAGGCCGGCGCAGCGCAGAGCGGGCTCGAAGAAAATAATTCTCTAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS-3UTR CCA 90 bp CCCCAGGCTCCTCCCGGCTGTCTCGGACAGAGACTGAGAAGCCTGCCGCGTCCCGGGTTGGGCGTGCACTaGTCAGGCAGGTTTTGCACG +
Preference number: 4 (lower is better)
Translates to: PQAPPGCLGQRLRSLPRPGLGVH*SGRFCT
Trigger: CGTGCAAAACCTGCCTGACCAGTGCACGCCCAACCC...GGGACGCGGCAGGCTTCTCAGTCTCTGTCCGAGACAGCCGGGAGGAGCCTGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS-3UTR CCA 90 bp CCCCAGGCTCCTCCCGGCTGTCTCGGACAGAGACTGAGAAGCCTGCCGCGTCCCATCCAGGTGCTGTCCTaGTGGCCTCCGGCAAAGAGG +
Preference number: 4 (lower is better)
Translates to: PQAPPGCLGQRLRSLPRPIQVLS*WPPAKR
Trigger: CCTCTTTGCCGGAGGCCACCAGGACAGCACCTGGAT...GGGACGCGGCAGGCTTCTCAGTCTCTGTCCGAGACAGCCGGGAGGAGCCTGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS-3UTR GCA 90 bp AATAGAGAATTATTTTCTTCGAGCCCGCTCTGCGCTGCGCCGGCCTCCCCGCGCACGGCCAGCCTCTCCTaGAGCTGCGCGGCGCTCACC +
Preference number: 4 (lower is better)
Translates to: NRELFSSSPLCAAPASPRTASLS*SCAALT
Trigger: GGTGAGCGCCGCGCAGCTGCAGGAGAGGCTGGCCGT...GCGCGGGGAGGCCGGCGCAGCGCAGAGCGGGCTCGAAGAAAATAATTCTCTATT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS-3UTR GCA 90 bp AATAGAGAATTATTTTCTTCGAGCCCGCTCTGCGCTGCGCCGGCCTCCCCGCGCACGGGGCTCCGCAGGTaGCTCTCGAGCACGGCCAGC +
Preference number: 4 (lower is better)
Translates to: NRELFSSSPLCAAPASPRTGLRR*LSSTAS
Trigger: GCTGGCCGTGCTCGAGAGGCACCTGCGGAGCCCCGT...GCGCGGGGAGGCCGGCGCAGCGCAGAGCGGGCTCGAAGAAAATAATTCTCTATT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS-3UTR CCA 90 bp AGGAGCCCCCAGGCTCCTCCCGGCTGTCTCGGACAGAGACTGAGAAGCCTGCCGTCCTATCGCAGGGGTTaGGCGTGCACTGGTCAGGCA +
Preference number: 4 (lower is better)
Translates to: RSPQAPPGCLGQRLRSLPSYRRG*ACTGQA
Trigger: TGCCTGACCAGTGCACGCCCAACCCCTGCGATAGGA...CGGCAGGCTTCTCAGTCTCTGTCCGAGACAGCCGGGAGGAGCCTGGGGGCTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS-3UTR CCA 90 bp AGGAGCCCCCAGGCTCCTCCCGGCTGTCTCGGACAGAGACTGAGAAGCCTGCCGAGGTCCTGGCAGGCTTaGGTCCCCTTCCTATCGCAG +
Preference number: 4 (lower is better)
Translates to: RSPQAPPGCLGQRLRSLPRSWQA*VPFLSQ
Trigger: CTGCGATAGGAAGGGGACCCAAGCCTGCCAGGACCT...CGGCAGGCTTCTCAGTCTCTGTCCGAGACAGCCGGGAGGAGCCTGGGGGCTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS-3UTR CCA 90 bp AGGAGCCCCCAGGCTCCTCCCGGCTGTCTCGGACAGAGACTGAGAAGCCTGCCGCGGCAAGCCTTCTCCTaGGAGCTGTACGCAAAGCCC +
Preference number: 4 (lower is better)
Translates to: RSPQAPPGCLGQRLRSLPRQAFS*ELYAKP
Trigger: GGGCTTTGCGTACAGCTCCCAGGAGAAGGCTTGCCG...CGGCAGGCTTCTCAGTCTCTGTCCGAGACAGCCGGGAGGAGCCTGGGGGCTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS-3UTR CCA 90 bp AATAGAGAATTATTTTCTTCGAGCCCGCTCTGCGCTGCGCCGGCCTCCCCGCGCCCTCGCTCTGGCCCCTaGTGCCGTCCACCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: NRELFSSSPLCAAPASPRPRSGP*CRPPPG
Trigger: CCCTGGAGGTGGACGGCACCAGGGGCCAGAGCGAGG...GCGCGGGGAGGCCGGCGCAGCGCAGAGCGGGCTCGAAGAAAATAATTCTCTATT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS-3UTR GCA 90 bp AGGAGCCCCCAGGCTCCTCCCGGCTGTCTCGGACAGAGACTGAGAAGCCTGCCGTGCTCACAGCGGCCCTaGAGACACTCGTCCACATCT +
Preference number: 4 (lower is better)
Translates to: RSPQAPPGCLGQRLRSLPCSQRP*RHSSTS
Trigger: AGATGTGGACGAGTGTCTGCAGGGCCGCTGTGAGCA...CGGCAGGCTTCTCAGTCTCTGTCCGAGACAGCCGGGAGGAGCCTGGGGGCTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS-3UTR GCA 90 bp GGGCCCACGGCTGAGTGCGCGGCGTCAGAGGCCCCAAGTCCATCTCACTATTTACCAGCACGATCCAGGTaGTGTCCTGGTGGCCTCCGG +
Preference number: 4 (lower is better)
Translates to: GPTAECAASEAPSPSHYLPARSR*CPGGLR
Trigger: CCGGAGGCCACCAGGACAGCACCTGGATCGTGCTGG...TAAATAGTGAGATGGACTTGGGGCCTCTGACGCCGCGCACTCAGCCGTGGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS-3UTR CCA 90 bp CCCCAGGCTCCTCCCGGCTGTCTCGGACAGAGACTGAGAAGCCTGCCGCGTCCCCTGTGGCAGGAACAGTaGAAGCTACCCGGCTTGTTG +
Preference number: 4 (lower is better)
Translates to: PQAPPGCLGQRLRSLPRPLWQEQ*KLPGLL
Trigger: CAACAAGCCGGGTAGCTTCCACTGTTCCTGCCACAG...GGGACGCGGCAGGCTTCTCAGTCTCTGTCCGAGACAGCCGGGAGGAGCCTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS-3UTR TCA 90 bp ATAGAGAATTATTTTCTTCGAGCCCGCTCTGCGCTGCGCCGGCCTCCCCGCGCCTGGGCTGCAGCCTCTTaGAGCGCAGTCGGATCACGG +
Preference number: 4 (lower is better)
Translates to: IENYFLRARSALRRPPRAWAAAS*SAVGSR
Trigger: CCGTGATCCGACTGCGCTTCAAGAGGCTGCAGCCCA...GGCGCGGGGAGGCCGGCGCAGCGCAGAGCGGGCTCGAAGAAAATAATTCTCTAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS-3UTR TCA 90 bp AGGAGCCCCCAGGCTCCTCCCGGCTGTCTCGGACAGAGACTGAGAAGCCTGCCGACGGTCAGGTTCAGATaGTACAGTCCTCGCTCCGGT +
Preference number: 4 (lower is better)
Translates to: RSPQAPPGCLGQRLRSLPTVRFR*YSPRSG
Trigger: ACCGGAGCGAGGACTGTATCATCTGAACCTGACCGT...CGGCAGGCTTCTCAGTCTCTGTCCGAGACAGCCGGGAGGAGCCTGGGGGCTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS-3UTR TCA 90 bp AATAGAGAATTATTTTCTTCGAGCCCGCTCTGCGCTGCGCCGGCCTCCCCGCGCCCCTCAGCGAGACGGTaGCCACGTGCTCTTGGCCGT +
Preference number: 4 (lower is better)
Translates to: NRELFSSSPLCAAPASPRPSARR*PRALGR
Trigger: ACGGCCAAGAGCACGTGGTCACCGTCTCGCTGAGGG...GCGCGGGGAGGCCGGCGCAGCGCAGAGCGGGCTCGAAGAAAATAATTCTCTATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS-3UTR GCA 90 bp AGGAGCCCCCAGGCTCCTCCCGGCTGTCTCGGACAGAGACTGAGAAGCCTGCCGTGTCTTGGCAGGTCCTaGCATCAGAGGAGAGCTCGA +
Preference number: 4 (lower is better)
Translates to: RSPQAPPGCLGQRLRSLPCLGRS*HQRRAR
Trigger: TCGAGCTCTCCTCTGATGGCAGGACCTGCCAAGACA...CGGCAGGCTTCTCAGTCTCTGTCCGAGACAGCCGGGAGGAGCCTGGGGGCTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS-3UTR GCA 90 bp ATAGAGAATTATTTTCTTCGAGCCCGCTCTGCGCTGCGCCGGCCTCCCCGCGCCGAGACGGTGACCACGTaGTCTTGGCCGTCGCAGACC +
Preference number: 4 (lower is better)
Translates to: IENYFLRARSALRRPPRAETVTT*SWPSQT
Trigger: GGTCTGCGACGGCCAAGAGCACGTGGTCACCGTCTC...GGCGCGGGGAGGCCGGCGCAGCGCAGAGCGGGCTCGAAGAAAATAATTCTCTAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS-3UTR CCA 90 bp ACGGCTGAGTGCGCGGCGTCAGAGGCCCCAAGTCCATCTCACTATTTACAGATAAGGCGCGGCGCTGCCTaGGCCGCAGGAACTGCGTGG +
Preference number: 4 (lower is better)
Translates to: TAECAASEAPSPSHYLQIRRGAA*AAGTAW
Trigger: CCACGCAGTTCCTGCGGCCCAGGCAGCGCCGCGCCT...TATCTGTAAATAGTGAGATGGACTTGGGGCCTCTGACGCCGCGCACTCAGCCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS-3UTR CCA 90 bp CCCCAGGCTCCTCCCGGCTGTCTCGGACAGAGACTGAGAAGCCTGCCGCGTCCCGGTTTTGCACGCAGGTaGCGAAGCCTGAGTTTTTGG +
Preference number: 4 (lower is better)
Translates to: PQAPPGCLGQRLRSLPRPGFARR*RSLSFW
Trigger: CCAAAAACTCAGGCTTCGCCACCTGCGTGCAAAACC...GGGACGCGGCAGGCTTCTCAGTCTCTGTCCGAGACAGCCGGGAGGAGCCTGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS-3UTR CCA 90 bp ATAGAGAATTATTTTCTTCGAGCCCGCTCTGCGCTGCGCCGGCCTCCCCGCGCCCAGGTGCTGTCCTGGTaGCCTCCGGCAAAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: IENYFLRARSALRRPPRAQVLSW*PPAKRR
Trigger: CCTCCTCTTTGCCGGAGGCCACCAGGACAGCACCTG...GGCGCGGGGAGGCCGGCGCAGCGCAGAGCGGGCTCGAAGAAAATAATTCTCTAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS-3UTR CCA 90 bp GGGCCCACGGCTGAGTGCGCGGCGTCAGAGGCCCCAAGTCCATCTCACTATTTAAGTCCTCGCTCCGGTTaGAACAAGTCCCCGGCCACC +
Preference number: 4 (lower is better)
Translates to: GPTAECAASEAPSPSHYLSPRSG*NKSPAT
Trigger: GGTGGCCGGGGACTTGTTCCAACCGGAGCGAGGACT...TAAATAGTGAGATGGACTTGGGGCCTCTGACGCCGCGCACTCAGCCGTGGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS-3UTR TCA 90 bp ACGGCTGAGTGCGCGGCGTCAGAGGCCCCAAGTCCATCTCACTATTTACAGATACCGGGCCGCTGCTGGTaGCACGGCCGACACCGTTGT +
Preference number: 4 (lower is better)
Translates to: TAECAASEAPSPSHYLQIPGRCW*HGRHRC
Trigger: ACAACGGTGTCGGCCGTGTCACCAGCAGCGGCCCGG...TATCTGTAAATAGTGAGATGGACTTGGGGCCTCTGACGCCGCGCACTCAGCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS-3UTR TCA 90 bp ACGGCTGAGTGCGCGGCGTCAGAGGCCCCAAGTCCATCTCACTATTTACAGATAGGCCGCCAGCAAAGGTaGGCACGGGGCTCCGCAGGT +
Preference number: 4 (lower is better)
Translates to: TAECAASEAPSPSHYLQIGRQQR*ARGSAG
Trigger: ACCTGCGGAGCCCCGTGCTCACCTTTGCTGGCGGCC...TATCTGTAAATAGTGAGATGGACTTGGGGCCTCTGACGCCGCGCACTCAGCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS-3UTR GCA 90 bp ACGGCTGAGTGCGCGGCGTCAGAGGCCCCAAGTCCATCTCACTATTTACAGATAAGCCGGGCAGGTTCTTaGAGCGCGCCTCCCCGCAGG +
Preference number: 4 (lower is better)
Translates to: TAECAASEAPSPSHYLQISRAGS*SAPPRR
Trigger: CCTGCGGGGAGGCGCGCTGCAAGAACCTGCCCGGCT...TATCTGTAAATAGTGAGATGGACTTGGGGCCTCTGACGCCGCGCACTCAGCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS-3UTR GCA 90 bp CCACGGCTGAGTGCGCGGCGTCAGAGGCCCCAAGTCCATCTCACTATTTACAGACAGCACGCCTGTGTCTaGGGCTGGGCGGATGTGAGC +
Preference number: 4 (lower is better)
Translates to: PRLSARRQRPQVHLTIYRQHACV*GWADVS
Trigger: GCTCACATCCGCCCAGCCGCAGACACAGGCGTGCTG...TCTGTAAATAGTGAGATGGACTTGGGGCCTCTGACGCCGCGCACTCAGCCGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS-3UTR GCA 90 bp ACGGCTGAGTGCGCGGCGTCAGAGGCCCCAAGTCCATCTCACTATTTACAGATACGCTCTGGCCCCTGGTaGCGTCCACCTCCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: TAECAASEAPSPSHYLQIRSGPW*RPPPGW
Trigger: CCACCCTGGAGGTGGACGGCACCAGGGGCCAGAGCG...TATCTGTAAATAGTGAGATGGACTTGGGGCCTCTGACGCCGCGCACTCAGCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS-3UTR CCA 90 bp GGGCCCACGGCTGAGTGCGCGGCGTCAGAGGCCCCAAGTCCATCTCACTATTTACTACCCGGCTTGTTGTaGCAGATCTGGAGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: GPTAECAASEAPSPSHYLLPGLL*QIWRQP
Trigger: GGGCTGCCTCCAGATCTGCCACAACAAGCCGGGTAG...TAAATAGTGAGATGGACTTGGGGCCTCTGACGCCGCGCACTCAGCCGTGGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS-3UTR CCA 90 bp ATAGAGAATTATTTTCTTCGAGCCCGCTCTGCGCTGCGCCGGCCTCCCCGCGCCGTCTGCCACATGCCATaGTTGATGACCGGGCCGCTG +
Preference number: 4 (lower is better)
Translates to: IENYFLRARSALRRPPRAVCHMP*LMTGPL
Trigger: CAGCGGCCCGGTCATCAACCATGGCATGTGGCAGAC...GGCGCGGGGAGGCCGGCGCAGCGCAGAGCGGGCTCGAAGAAAATAATTCTCTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS-3UTR CCA 90 bp ATAGAGAATTATTTTCTTCGAGCCCGCTCTGCGCTGCGCCGGCCTCCCCGCGCCAGTCACCGGCACATCTaGCAGGCCGCCAGCAAAGGT +
Preference number: 4 (lower is better)
Translates to: IENYFLRARSALRRPPRASHRHI*QAASKG
Trigger: ACCTTTGCTGGCGGCCTGCCAGATGTGCCGGTGACT...GGCGCGGGGAGGCCGGCGCAGCGCAGAGCGGGCTCGAAGAAAATAATTCTCTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS-3UTR TCA 90 bp CCACGGCTGAGTGCGCGGCGTCAGAGGCCCCAAGTCCATCTCACTATTTACAGACACTCTTGGCCACGCTaGAGGGCACGCACGGCAAGA +
Preference number: 4 (lower is better)
Translates to: PRLSARRQRPQVHLTIYRHSWPR*RARTAR
Trigger: TCTTGCCGTGCGTGCCCTTCAGCGTGGCCAAGAGTG...TCTGTAAATAGTGAGATGGACTTGGGGCCTCTGACGCCGCGCACTCAGCCGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS-3UTR GCA 90 bp ACGGCTGAGTGCGCGGCGTCAGAGGCCCCAAGTCCATCTCACTATTTACAGATAAGCCTCTCCTGCAGCTaGGCGGCGCTCACCTCGCTC +
Preference number: 4 (lower is better)
Translates to: TAECAASEAPSPSHYLQISLSCS*AALTSL
Trigger: GAGCGAGGTGAGCGCCGCGCAGCTGCAGGAGAGGCT...TATCTGTAAATAGTGAGATGGACTTGGGGCCTCTGACGCCGCGCACTCAGCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS-3UTR CCA 90 bp ATAGAGAATTATTTTCTTCGAGCCCGCTCTGCGCTGCGCCGGCCTCCCCGCGCCTTGTTGTGGCAGATCTaGAGGCAGCCCCCGTTCTCC +
Preference number: 4 (lower is better)
Translates to: IENYFLRARSALRRPPRALLWQI*RQPPFS
Trigger: GGAGAACGGGGGCTGCCTCCAGATCTGCCACAACAA...GGCGCGGGGAGGCCGGCGCAGCGCAGAGCGGGCTCGAAGAAAATAATTCTCTAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS-3UTR CCA 90 bp AGGAGCCCCCAGGCTCCTCCCGGCTGTCTCGGACAGAGACTGAGAAGCCTGCCGACTTTCACCGTTTCCTaGATGGTGGTGTCTTCTCCG +
Preference number: 4 (lower is better)
Translates to: RSPQAPPGCLGQRLRSLPTFTVS*MVVSSP
Trigger: CGGAGAAGACACCACCATCCAGGAAACGGTGAAAGT...CGGCAGGCTTCTCAGTCTCTGTCCGAGACAGCCGGGAGGAGCCTGGGGGCTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS-3UTR CCA 90 bp ATAGAGAATTATTTTCTTCGAGCCCGCTCTGCGCTGCGCCGGCCTCCCCGCGCCGTGACCACGTGCTCTTaGCCGTCGCAGACCTTGATC +
Preference number: 4 (lower is better)
Translates to: IENYFLRARSALRRPPRAVTTCS*PSQTLI
Trigger: GATCAAGGTCTGCGACGGCCAAGAGCACGTGGTCAC...GGCGCGGGGAGGCCGGCGCAGCGCAGAGCGGGCTCGAAGAAAATAATTCTCTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS-3UTR TCA 90 bp ATAGAGAATTATTTTCTTCGAGCCCGCTCTGCGCTGCGCCGGCCTCCCCGCGCCGCAGGTGGCGAAGCCTaGGTTTTTGGTGTACGGAGA +
Preference number: 4 (lower is better)
Translates to: IENYFLRARSALRRPPRAAGGEA*VFGVRR
Trigger: TCTCCGTACACCAAAAACTCAGGCTTCGCCACCTGC...GGCGCGGGGAGGCCGGCGCAGCGCAGAGCGGGCTCGAAGAAAATAATTCTCTAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS-3UTR TCA 90 bp CCACGGCTGAGTGCGCGGCGTCAGAGGCCCCAAGTCCATCTCACTATTTACAGAGGCCGTCGCAGACCTTaGTCTCCATTAGGGCCAAGG +
Preference number: 4 (lower is better)
Translates to: PRLSARRQRPQVHLTIYRGRRRP*SPLGPR
Trigger: CCTTGGCCCTAATGGAGATCAAGGTCTGCGACGGCC...TCTGTAAATAGTGAGATGGACTTGGGGCCTCTGACGCCGCGCACTCAGCCGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS-3UTR TCA 90 bp ACGGCTGAGTGCGCGGCGTCAGAGGCCCCAAGTCCATCTCACTATTTACAGATACGCGGTGACTGGCGCTaGAGTCACCGGCACATCTGG +
Preference number: 4 (lower is better)
Translates to: TAECAASEAPSPSHYLQIRGDWR*SHRHIW
Trigger: CCAGATGTGCCGGTGACTTCAGCGCCAGTCACCGCG...TATCTGTAAATAGTGAGATGGACTTGGGGCCTCTGACGCCGCGCACTCAGCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS-3UTR TCA 90 bp ACGGCTGAGTGCGCGGCGTCAGAGGCCCCAAGTCCATCTCACTATTTACAGATACGCGGTAGAACGCGGTaGCTGGCGCTGAAGTCACCG +
Preference number: 4 (lower is better)
Translates to: TAECAASEAPSPSHYLQIRGRTR*LALKSP
Trigger: CGGTGACTTCAGCGCCAGTCACCGCGTTCTACCGCG...TATCTGTAAATAGTGAGATGGACTTGGGGCCTCTGACGCCGCGCACTCAGCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS-3UTR TCA 90 bp ACGGCTGAGTGCGCGGCGTCAGAGGCCCCAAGTCCATCTCACTATTTACAGATAGTCTCGGACAGAGACTaGGAAGCCTGCCGCGTCCCG +
Preference number: 4 (lower is better)
Translates to: TAECAASEAPSPSHYLQIVSDRD*EACRVP
Trigger: CGGGACGCGGCAGGCTTCTCAGTCTCTGTCCGAGAC...TATCTGTAAATAGTGAGATGGACTTGGGGCCTCTGACGCCGCGCACTCAGCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS-3UTR GCA 90 bp AATAGAGAATTATTTTCTTCGAGCCCGCTCTGCGCTGCGCCGGCCTCCCCGCGCGCAGGCCTCCGAGTCTaGGCACTCGTCTATGTCTTG +
Preference number: 4 (lower is better)
Translates to: NRELFSSSPLCAAPASPRAGLRV*ALVYVL
Trigger: CAAGACATAGACGAGTGCGCAGACTCGGAGGCCTGC...GCGCGGGGAGGCCGGCGCAGCGCAGAGCGGGCTCGAAGAAAATAATTCTCTATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS-3UTR GCA 90 bp GGGCCCACGGCTGAGTGCGCGGCGTCAGAGGCCCCAAGTCCATCTCACTATTTAAGTTCCAGCTCCTCATaGAGCCATCCAGACGAGGGT +
Preference number: 4 (lower is better)
Translates to: GPTAECAASEAPSPSHYLSSSSS*SHPDEG
Trigger: ACCCTCGTCTGGATGGCTGCATGAGGAGCTGGAACT...TAAATAGTGAGATGGACTTGGGGCCTCTGACGCCGCGCACTCAGCCGTGGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS-3UTR GCA 90 bp AGTGCGCGGCGTCAGAGGCCCCAAGTCCATCTCACTATTTACAGATATGTTACAGGGCCCACGGCTGAGTaGGCGGCGTCAGAGGCCCCA +
Preference number: 4 (lower is better)
Translates to: SARRQRPQVHLTIYRYVTGPTAE*AASEAP
Trigger: TGGGGCCTCTGACGCCGCGCACTCAGCCGTGGGCCC...TGTAACATATCTGTAAATAGTGAGATGGACTTGGGGCCTCTGACGCCGCGCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS-3UTR CCA 90 bp CCACGGCTGAGTGCGCGGCGTCAGAGGCCCCAAGTCCATCTCACTATTTACAGACAGGTGTCCATGTCCTaGGACAGCTTGAGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: PRLSARRQRPQVHLTIYRQVSMS*DSLRPP
Trigger: TGGGGGCCTCAAGCTGTCCCAGGACATGGACACCTG...TCTGTAAATAGTGAGATGGACTTGGGGCCTCTGACGCCGCGCACTCAGCCGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS-3UTR CCA 90 bp ATAGAGAATTATTTTCTTCGAGCCCGCTCTGCGCTGCGCCGGCCTCCCCGCGCCCCGTTTCCTGGATGGTaGTGTCTTCTCCGTTCAGCC +
Preference number: 4 (lower is better)
Translates to: IENYFLRARSALRRPPRAPFPGW*CLLRSA
Trigger: GGCTGAACGGAGAAGACACCACCATCCAGGAAACGG...GGCGCGGGGAGGCCGGCGCAGCGCAGAGCGGGCTCGAAGAAAATAATTCTCTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS-3UTR TCA 90 bp AATAGAGAATTATTTTCTTCGAGCCCGCTCTGCGCTGCGCCGGCCTCCCCGCGCCCTGGCTGCATTCGTTaGCATCTTTGTCGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: NRELFSSSPLCAAPASPRPGCIR*HLCRRA
Trigger: GGCTCTGCGACAAAGATGTCAACGAATGCAGCCAGG...GCGCGGGGAGGCCGGCGCAGCGCAGAGCGGGCTCGAAGAAAATAATTCTCTATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS-3UTR GCA 90 bp ACGGCTGAGTGCGCGGCGTCAGAGGCCCCAAGTCCATCTCACTATTTACAGATACTCTCCAGGTGGCCCTaGTTGGCCTCCTCGAAGACC +
Preference number: 4 (lower is better)
Translates to: TAECAASEAPSPSHYLQILSRWP*LASSKT
Trigger: GGTCTTCGAGGAGGCCAAGCAGGGCCACCTGGAGAG...TATCTGTAAATAGTGAGATGGACTTGGGGCCTCTGACGCCGCGCACTCAGCCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS-3UTR GCA 90 bp AATAGAGAATTATTTTCTTCGAGCCCGCTCTGCGCTGCGCCGGCCTCCCCGCGCGTGATAGTCTACCAGTaGCACAGAGAGAGGCACGGC +
Preference number: 4 (lower is better)
Translates to: NRELFSSSPLCAAPASPRVIVYQ*HRERHG
Trigger: GCCGTGCCTCTCTCTGTGGCACTGGTAGACTATCAC...GCGCGGGGAGGCCGGCGCAGCGCAGAGCGGGCTCGAAGAAAATAATTCTCTATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS-3UTR GCA 90 bp ACGGCTGAGTGCGCGGCGTCAGAGGCCCCAAGTCCATCTCACTATTTACAGATAGCCGTGATGTCGCTGTaGTTGTACGCCGCCTCGTCC +
Preference number: 4 (lower is better)
Translates to: TAECAASEAPSPSHYLQIAVMSL*LYAASS
Trigger: GGACGAGGCGGCGTACAAGCACAGCGACATCACGGC...TATCTGTAAATAGTGAGATGGACTTGGGGCCTCTGACGCCGCGCACTCAGCCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS-3UTR CCA 90 bp AGTGCGCGGCGTCAGAGGCCCCAAGTCCATCTCACTATTTACAGATATGTTACAGCGCTCACCTCGCTCTaGCCCCTGGTGCCGTCCACC +
Preference number: 4 (lower is better)
Translates to: SARRQRPQVHLTIYRYVTALTSL*PLVPST
Trigger: GGTGGACGGCACCAGGGGCCAGAGCGAGGTGAGCGC...TGTAACATATCTGTAAATAGTGAGATGGACTTGGGGCCTCTGACGCCGCGCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS-3UTR TCA 90 bp AGTGCGCGGCGTCAGAGGCCCCAAGTCCATCTCACTATTTACAGATATGTTACAGCCTCCTCGAAGACCTaGAAGGCGCGGCGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: SARRQRPQVHLTIYRYVTASSKT*KARRCL
Trigger: CAGGCAGCGCCGCGCCTTTCAGGTCTTCGAGGAGGC...TGTAACATATCTGTAAATAGTGAGATGGACTTGGGGCCTCTGACGCCGCGCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS-3UTR GCA 90 bp AATAGAGAATTATTTTCTTCGAGCCCGCTCTGCGCTGCGCCGGCCTCCCCGCGCGCCAGGACCACCAGCTaGTTCTTGAGTTTCTTCGTG +
Preference number: 4 (lower is better)
Translates to: NRELFSSSPLCAAPASPRARTTS*FLSFFV
Trigger: CACGAAGAAACTCAAGAAGCAGCTGGTGGTCCTGGC...GCGCGGGGAGGCCGGCGCAGCGCAGAGCGGGCTCGAAGAAAATAATTCTCTATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS-3UTR TCA 90 bp CCACGGCTGAGTGCGCGGCGTCAGAGGCCCCAAGTCCATCTCACTATTTACAGATTCTACTTCCCAGGTTaGTTCAGTCCCGACGTCCAG +
Preference number: 4 (lower is better)
Translates to: PRLSARRQRPQVHLTIYRFYFPG*FSPDVQ
Trigger: CTGGACGTCGGGACTGAATCAACCTGGGAAGTAGAA...TCTGTAAATAGTGAGATGGACTTGGGGCCTCTGACGCCGCGCACTCAGCCGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS-3UTR TCA 90 bp AATAGAGAATTATTTTCTTCGAGCCCGCTCTGCGCTGCGCCGGCCTCCCCGCGCCCACCAGCTGCTTCTTaGGTTTCTTCGTGGAGTGAT +
Preference number: 4 (lower is better)
Translates to: NRELFSSSPLCAAPASPRPPAAS*VSSWSD
Trigger: ATCACTCCACGAAGAAACTCAAGAAGCAGCTGGTGG...GCGCGGGGAGGCCGGCGCAGCGCAGAGCGGGCTCGAAGAAAATAATTCTCTATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS-3UTR GCA 90 bp CCACGGCTGAGTGCGCGGCGTCAGAGGCCCCAAGTCCATCTCACTATTTACAGACGAGGGTTTATAGGCTaGACGAGGTCCTTCTCATGG +
Preference number: 4 (lower is better)
Translates to: PRLSARRQRPQVHLTIYRRGFIG*TRSFSW
Trigger: CCATGAGAAGGACCTCGTGCAGCCTATAAACCCTCG...TCTGTAAATAGTGAGATGGACTTGGGGCCTCTGACGCCGCGCACTCAGCCGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS-3UTR GCA 90 bp AATAGAGAATTATTTTCTTCGAGCCCGCTCTGCGCTGCGCCGGCCTCCCCGCGCGTCACCGAGAAGCACTaGATCCTCGTGTTCACTTTC +
Preference number: 4 (lower is better)
Translates to: NRELFSSSPLCAAPASPRVTEKH*ILVFTF
Trigger: GAAAGTGAACACGAGGATGCAGTGCTTCTCGGTGAC...GCGCGGGGAGGCCGGCGCAGCGCAGAGCGGGCTCGAAGAAAATAATTCTCTATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS-3UTR GCA 90 bp AGTGCGCGGCGTCAGAGGCCCCAAGTCCATCTCACTATTTACAGATATGTTACAAGGGCCAAGGCCGTATaGTCCACGGCCAGGACCACC +
Preference number: 4 (lower is better)
Translates to: SARRQRPQVHLTIYRYVTRAKAV*STARTT
Trigger: GGTGGTCCTGGCCGTGGAGCATACGGCCTTGGCCCT...TGTAACATATCTGTAAATAGTGAGATGGACTTGGGGCCTCTGACGCCGCGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS-3UTR CCA 90 bp GGGCCCACGGCTGAGTGCGCGGCGTCAGAGGCCCCAAGTCCATCTCACTATTTACGAAGCCTGAGTTTTTaGTGTACGGAGACCCATACT +
Preference number: 4 (lower is better)
Translates to: GPTAECAASEAPSPSHYLRSLSF*CTETHT
Trigger: AGTATGGGTCTCCGTACACCAAAAACTCAGGCTTCG...TAAATAGTGAGATGGACTTGGGGCCTCTGACGCCGCGCACTCAGCCGTGGGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS-3UTR CCA 90 bp CCACGGCTGAGTGCGCGGCGTCAGAGGCCCCAAGTCCATCTCACTATTTACAGAACGAGGTCCTTCTCATaGAAGGGAATACCTCCCACG +
Preference number: 4 (lower is better)
Translates to: PRLSARRQRPQVHLTIYRTRSFS*KGIPPT
Trigger: CGTGGGAGGTATTCCCTTCCATGAGAAGGACCTCGT...TCTGTAAATAGTGAGATGGACTTGGGGCCTCTGACGCCGCGCACTCAGCCGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS-3UTR TCA 90 bp AGTGCGCGGCGTCAGAGGCCCCAAGTCCATCTCACTATTTACAGATATGTTACACCAGCAGCCTCCGGTTaGCCTCCAGTGTCATGCAGC +
Preference number: 4 (lower is better)
Translates to: SARRQRPQVHLTIYRYVTPAASG*PPVSCS
Trigger: GCTGCATGACACTGGAGGTCAACCGGAGGCTGCTGG...TGTAACATATCTGTAAATAGTGAGATGGACTTGGGGCCTCTGACGCCGCGCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS-3UTR TCA 90 bp AGTGCGCGGCGTCAGAGGCCCCAAGTCCATCTCACTATTTACAGATATGTTACAGGCAGGAGTGGGCCGTaGTGTCGCTGTGCTTGTACG +
Preference number: 4 (lower is better)
Translates to: SARRQRPQVHLTIYRYVTGRSGP*CRCACT
Trigger: CGTACAAGCACAGCGACATCACGGCCCACTCCTGCC...TGTAACATATCTGTAAATAGTGAGATGGACTTGGGGCCTCTGACGCCGCGCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS-3UTR GCA 90 bp AGTGCGCGGCGTCAGAGGCCCCAAGTCCATCTCACTATTTACAGATATGTTACACGGCAAAGAGGAGGATaGCCTCGGGGTCAAAGGTCC +
Preference number: 4 (lower is better)
Translates to: SARRQRPQVHLTIYRYVTRQRGG*PRGQRS
Trigger: GGACCTTTGACCCCGAGGGCATCCTCCTCTTTGCCG...TGTAACATATCTGTAAATAGTGAGATGGACTTGGGGCCTCTGACGCCGCGCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS-3UTR TCA 90 bp AATAGAGAATTATTTTCTTCGAGCCCGCTCTGCGCTGCGCCGGCCTCCCCGCGCGAGACCCATACTTGTTaGTGCAGTCTAAGTATCTTG +
Preference number: 4 (lower is better)
Translates to: NRELFSSSPLCAAPASPRETHTC*CSLSIL
Trigger: CAAGATACTTAGACTGCATCAACAAGTATGGGTCTC...GCGCGGGGAGGCCGGCGCAGCGCAGAGCGGGCTCGAAGAAAATAATTCTCTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS-3UTR TCA 90 bp AGTGCGCGGCGTCAGAGGCCCCAAGTCCATCTCACTATTTACAGATATGTTACAAGAAGAAGTTGCCCATaGGGTCCTGGCAGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: SARRQRPQVHLTIYRYVTRRSCP*GPGRLG
Trigger: CCCAAGCCTGCCAGGACCTCATGGGCAACTTCTTCT...TGTAACATATCTGTAAATAGTGAGATGGACTTGGGGCCTCTGACGCCGCGCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS-3UTR GCA 90 bp CCACGGCTGAGTGCGCGGCGTCAGAGGCCCCAAGTCCATCTCACTATTTACAGATCAACAGAGATTGTCTaGCACATGCCATGGTTGATG +
Preference number: 4 (lower is better)
Translates to: PRLSARRQRPQVHLTIYRSTEIV*HMPWLM
Trigger: CATCAACCATGGCATGTGGCAGACAATCTCTGTTGA...TCTGTAAATAGTGAGATGGACTTGGGGCCTCTGACGCCGCGCACTCAGCCGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS-3UTR CCA 90 bp AGTGCGCGGCGTCAGAGGCCCCAAGTCCATCTCACTATTTACAGATATGTTACACAGCCCCCGTTCTCCTaGCTGCATTCGTTGACATCT +
Preference number: 4 (lower is better)
Translates to: SARRQRPQVHLTIYRYVTQPPFS*LHSLTS
Trigger: AGATGTCAACGAATGCAGCCAGGAGAACGGGGGCTG...TGTAACATATCTGTAAATAGTGAGATGGACTTGGGGCCTCTGACGCCGCGCACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS-3UTR CCA 90 bp AGTGCGCGGCGTCAGAGGCCCCAAGTCCATCTCACTATTTACAGATATGTTACACACTCGTCTATGTCTTaGCAGGTCCTGCCATCAGAG +
Preference number: 4 (lower is better)
Translates to: SARRQRPQVHLTIYRYVTHSSMS*QVLPSE
Trigger: CTCTGATGGCAGGACCTGCCAAGACATAGACGAGTG...TGTAACATATCTGTAAATAGTGAGATGGACTTGGGGCCTCTGACGCCGCGCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS-3UTR CCA 90 bp AGTGCGCGGCGTCAGAGGCCCCAAGTCCATCTCACTATTTACAGATATGTTACATCACCGTTTCCTGGATaGTGGTGTCTTCTCCGTTCA +
Preference number: 4 (lower is better)
Translates to: SARRQRPQVHLTIYRYVTSPFPG*WCLLRS
Trigger: TGAACGGAGAAGACACCACCATCCAGGAAACGGTGA...TGTAACATATCTGTAAATAGTGAGATGGACTTGGGGCCTCTGACGCCGCGCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS GCA 90 bp AGCACGGGGCTCCGCAGGTGCCTCTCGAGCACGGCCAGCCTCTCCTaGAGCTGCGCGGCGCTCACCTCGCTCTGGCCCCTGGTGCCGTCC +
Preference number: 5 (lower is better)
Translates to: STGLRRCLSSTASLS*SCAALTSLWPLVPS
Trigger: GGACGGCACCAGGGGCCAGAGCGAGGTGAGCGCCGCGCAGCTGCAGGAGAGGCTGGCCGTGCTCGAGAGGCACCTGCGGAGCCCCGTGCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327773.7
ENST00000480426.5
ENST00000608763.1
ENST00000610073.1
CDS GCA 90 bp CTACCTGGCAGGCCGCCAGCAAAGGTGAGCACGGGGCTCCGCAGGTaGCTCTCGAGCACGGCCAGCCTCTCCTGCAGCTGCGCGGCGCTC +
Preference number: 5 (lower is better)
Translates to: LPGRPPAKVSTGLRR*LSSTASLSCSCAAL
Trigger: GAGCGCCGCGCAGCTGCAGGAGAGGCTGGCCGTGCTCGAGAGGCACCTGCGGAGCCCCGTGCTCACCTTTGCTGGCGGCCTGCCAGGTAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608763.1
CDS GCA 90 bp ACATCTGGCAGGCCGCCAGCAAAGGTGAGCACGGGGCTCCGCAGGTaGCTCTCGAGCACGGCCAGCCTCTCCTGCAGCTGCGCGGCGCTC +
Preference number: 5 (lower is better)
Translates to: TSGRPPAKVSTGLRR*LSSTASLSCSCAAL
Trigger: GAGCGCCGCGCAGCTGCAGGAGAGGCTGGCCGTGCTCGAGAGGCACCTGCGGAGCCCCGTGCTCACCTTTGCTGGCGGCCTGCCAGATGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327773.7
ENST00000480426.5
ENST00000610073.1
CDS TCA 90 bp ACGCACTCCCTCTCCAGGTGGCCCTGCTTGGCCTCCTCGAAGACCTaGAAGGCGCGGCGCTGCCTGGGCCGCAGGAACTGCGTGGCCTCG +
Preference number: 5 (lower is better)
Translates to: THSLSRWPCLASSKT*KARRCLGRRNCVAS
Trigger: CGAGGCCACGCAGTTCCTGCGGCCCAGGCAGCGCCGCGCCTTTCAGGTCTTCGAGGAGGCCAAGCAGGGCCACCTGGAGAGGGAGTGCGT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327773.7
ENST00000476291.1
CDS GCA 90 bp GCTGCAGCTCCAGCCGGCCGGCTCTCAGGGCCAGCACGATCCAGGTaGTGTCCTGGTGGCCTCCGGCAAAGAGGAGGATGCCCTCGGGGT +
Preference number: 5 (lower is better)
Translates to: AAAPAGRLSGPARSR*CPGGLRQRGGCPRG
Trigger: ACCCCGAGGGCATCCTCCTCTTTGCCGGAGGCCACCAGGACAGCACCTGGATCGTGCTGGCCCTGAGAGCCGGCCGGCTGGAGCTGCAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327773.7
ENST00000480426.5
ENST00000610073.1
CDS GCA 90 bp CAACCGCAGCACAGCGGCATCTCAGACGGGGCTGGGGCAGGCGGCTaGAGGGACTGGCCAGGGCACCACCCAGAGGTCGCATCCAGACTC +
Preference number: 5 (lower is better)
Translates to: QPQHSGISDGAGAGG*RDWPGHHPEVASRL
Trigger: GAGTCTGGATGCGACCTCTGGGTGGTGCCCTGGCCAGTCCCTGCAGCCGCCTGCCCCAGCCCCGTCTGAGATGCCGCTGTGCTGCGGTTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610073.1
CDS TCA 90 bp TTGAGCGGAGCAGGGAGCACCTACCTGGCAGGCCGCCAGCAAAGGTaGGCACGGGGCTCCGCAGGTGCCTCTCGAGCACGGCCAGCCTCT +
Preference number: 5 (lower is better)
Translates to: LSGAGSTYLAGRQQR*ARGSAGASRARPAS
Trigger: AGAGGCTGGCCGTGCTCGAGAGGCACCTGCGGAGCCCCGTGCTCACCTTTGCTGGCGGCCTGCCAGGTAGGTGCTCCCTGCTCCGCTCAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608763.1
CDS TCA 90 bp CCTGCGGGCAGCCGAGGACTTGCCGGCTCCCACGTGCCTTTCCGCTaGCCCTCCCAGCTCATGGCAAGGACATCCCCGGTCCCAGCCTCT +
Preference number: 5 (lower is better)
Translates to: PAGSRGLAGSHVPFR*PSQLMARTSPVPAS
Trigger: AGAGGCTGGGACCGGGGATGTCCTTGCCATGAGCTGGGAGGGTCAGCGGAAAGGCACGTGGGAGCCGGCAAGTCCTCGGCTGCCCGCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608763.1
CDS GCA 90 bp GCTGGCCACCCCTACGCCGCACGCCTGTCTCCGTCCAGGGTTCCCTaGAGCCCTGGGTCTGGATGCTCGCTGACTGTGGATGACACCCCC +
Preference number: 5 (lower is better)
Translates to: AGHPYAARLSPSRVP*SPGSGCSLTVDDTP
Trigger: GGGGGTGTCATCCACAGTCAGCGAGCATCCAGACCCAGGGCTGCAGGGAACCCTGGACGGAGACAGGCGTGCGGCGTAGGGGTGGCCAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608763.1
CDS CCA 90 bp AGCCGGCCGGCTCTCAGGGCCAGCACGATCCAGGTGCTGTCCTGGTaGCCTCCGGCAAAGAGGAGGATGCCCTCGGGGTCAAAGGTCCGG +
Preference number: 5 (lower is better)
Translates to: SRPALRASTIQVLSW*PPAKRRMPSGSKVR
Trigger: CCGGACCTTTGACCCCGAGGGCATCCTCCTCTTTGCCGGAGGCCACCAGGACAGCACCTGGATCGTGCTGGCCCTGAGAGCCGGCCGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327773.7
ENST00000480426.5
ENST00000610073.1
CDS GCA 90 bp TCCATTAGGGCCAAGGCCGTATGCTCCACGGCCAGGACCACCAGCTaGAGGAGACCGAGGTGTGGTCAGGGCCTGCCGGCCACCCCTACG +
Preference number: 5 (lower is better)
Translates to: SIRAKAVCSTARTTS*RRPRCGQGLPATPT
Trigger: CGTAGGGGTGGCCGGCAGGCCCTGACCACACCTCGGTCTCCTGCAGCTGGTGGTCCTGGCCGTGGAGCATACGGCCTTGGCCCTAATGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608763.1
CDS CCA 90 bp AGCCCATGGGACACGGCAGGACGCCCTGCTGGACATGGGAGGGGCTaGCGGTCACTCTGTTCGCTGCTAACAGCTGCGGTGACAGCCGCG +
Preference number: 5 (lower is better)
Translates to: SPWDTAGRPAGHGRG*RSLCSLLTAAVTAA
Trigger: CGCGGCTGTCACCGCAGCTGTTAGCAGCGAACAGAGTGACCGCCAGCCCCTCCCATGTCCAGCAGGGCGTCCTGCCGTGTCCCATGGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608763.1
CDS CCA 90 bp ATGGCAAGGACATCCCCGGTCCCAGCCTCTGTGCTGTGTAGCCCATaGGACACGGCAGGACGCCCTGCTGGACATGGGAGGGGCTGGCGG +
Preference number: 5 (lower is better)
Translates to: MARTSPVPASVLCSP*DTAGRPAGHGRGWR
Trigger: CCGCCAGCCCCTCCCATGTCCAGCAGGGCGTCCTGCCGTGTCCCATGGGCTACACAGCACAGAGGCTGGGACCGGGGATGTCCTTGCCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000608763.1
CDS-3UTR CAA 90 bp GGGCCCACGGCTGAGTGCGCGGCGTCAGAGGCCCCAAGTCCATCTCACTATTTAGAGCCGGGCAGGTTCTaGCAGCGCGCCTCCCCGCAG +
Preference number: 5 (lower is better)
Translates to: GPTAECAASEAPSPSHYLEPGRF*QRASPQ
Trigger: CTGCGGGGAGGCGCGCTGCAAGAACCTGCCCGGCTC...TAAATAGTGAGATGGACTTGGGGCCTCTGACGCCGCGCACTCAGCCGTGGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS-3UTR CAA 90 bp AGGAGCCCCCAGGCTCCTCCCGGCTGTCTCGGACAGAGACTGAGAAGCCTGCCGCAGTCCTCGCTCCGGTaGGAACAAGTCCCCGGCCAC +
Preference number: 5 (lower is better)
Translates to: RSPQAPPGCLGQRLRSLPQSSLR*EQVPGH
Trigger: GTGGCCGGGGACTTGTTCCAACCGGAGCGAGGACTG...CGGCAGGCTTCTCAGTCTCTGTCCGAGACAGCCGGGAGGAGCCTGGGGGCTCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS TCA 90 bp GGCAGCGAGGCAAAGAACCTCAAGGCGAGGGCTGGCTGGAAGCCCTaGACGTCGCAGCCCAGACCCAAGAGCCCCACGGCTGCATCCCAG +
Preference number: 5 (lower is better)
Translates to: GSEAKNLKARAGWKP*TSQPRPKSPTAASQ
Trigger: CTGGGATGCAGCCGTGGGGCTCTTGGGTCTGGGCTGCGACGTTCAGGGCTTCCAGCCAGCCCTCGCCTTGAGGTTCTTTGCCTCGCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480426.5
CDS TCA 90 bp TGCAGGAGACCGAGGTGTGGTCAGGGCCTGCCGGCCACCCCTACGTaGGCTGTTAGGTCCAAGCTGGTCCTCACAGCTGCTGGCCACCCC +
Preference number: 5 (lower is better)
Translates to: CRRPRCGQGLPATPT*AVRSKLVLTAAGHP
Trigger: GGGGTGGCCAGCAGCTGTGAGGACCAGCTTGGACCTAACAGCTCACGTAGGGGTGGCCGGCAGGCCCTGACCACACCTCGGTCTCCTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608763.1
CDS GCA 90 bp TTCACACTCTTGGCCACGCTGAAGGGCACGCACGGCAAGATGTCCTaGCACGGACGGGGGCCACGCCGGTCGGGGATGTGGCCTTCACTC +
Preference number: 5 (lower is better)
Translates to: FTLLATLKGTHGKMS*HGRGPRRSGMWPSL
Trigger: GAGTGAAGGCCACATCCCCGACCGGCGTGGCCCCCGTCCGTGGCAGGACATCTTGCCGTGCGTGCCCTTCAGCGTGGCCAAGAGTGTGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480426.5
CDS GCA 90 bp TTTCCCTGCCCTCCTCCCCTGACCGGGCAGCTCCCGGGGTGTTGGTaGACGCTTCTGATCAAGGCCCGGCTGGGAAGGCTGACTTCAGCC +
Preference number: 5 (lower is better)
Translates to: FPCPPPLTGQLPGCW*TLLIKARLGRLTSA
Trigger: GGCTGAAGTCAGCCTTCCCAGCCGGGCCTTGATCAGAAGCGTGCACCAACACCCCGGGAGCTGCCCGGTCAGGGGAGGAGGGCAGGGAAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610073.1
CDS GCA 90 bp TGGACATGGGAGGGGCTGGCGGTCACTCTGTTCGCTGCTAACAGCTaGGGTGACAGCCGCGGGTCCCAACTGCAGCCTGGCCCGAGGTCT +
Preference number: 5 (lower is better)
Translates to: WTWEGLAVTLFAANS*GDSRGSQLQPGPRS
Trigger: AGACCTCGGGCCAGGCTGCAGTTGGGACCCGCGGCTGTCACCGCAGCTGTTAGCAGCGAACAGAGTGACCGCCAGCCCCTCCCATGTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608763.1
CDS-3UTR CAA 90 bp AGGAGCCCCCAGGCTCCTCCCGGCTGTCTCGGACAGAGACTGAGAAGCCTGCCGGAGGTCCTGGCAGGCTaGGGTCCCCTTCCTATCGCA +
Preference number: 5 (lower is better)
Translates to: RSPQAPPGCLGQRLRSLPEVLAG*GPLPIA
Trigger: TGCGATAGGAAGGGGACCCAAGCCTGCCAGGACCTC...CGGCAGGCTTCTCAGTCTCTGTCCGAGACAGCCGGGAGGAGCCTGGGGGCTCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS TCA 90 bp CGCACGGCAAGATGTCCTCACAGGTGTCCATGTCCTGGGACAGCTTaGGGCCCCCACGCCCGTCACAGTGGCAGGTGTAGCTCCCTGGGG +
Preference number: 5 (lower is better)
Translates to: RTARCPHRCPCPGTA*GPHARHSGRCSSLG
Trigger: CCCCAGGGAGCTACACCTGCCACTGTGACGGGCGTGGGGGCCTCAAGCTGTCCCAGGACATGGACACCTGTGAGGACATCTTGCCGTGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327773.7
ENST00000610073.1
CDS GCA 90 bp GACCCTCCCAGCTCATGGCAAGGACATCCCCGGTCCCAGCCTCTGTaGTGTGTAGCCCATGGGACACGGCAGGACGCCCTGCTGGACATG +
Preference number: 5 (lower is better)
Translates to: DPPSSWQGHPRSQPL*CVAHGTRQDALLDM
Trigger: CATGTCCAGCAGGGCGTCCTGCCGTGTCCCATGGGCTACACAGCACAGAGGCTGGGACCGGGGATGTCCTTGCCATGAGCTGGGAGGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608763.1
CDS GCA 90 bp GCAAGTGAAAACCTGCGGGCAGCCGAGGACTTGCCGGCTCCCACGTaGCTTTCCGCTGACCCTCCCAGCTCATGGCAAGGACATCCCCGG +
Preference number: 5 (lower is better)
Translates to: ASENLRAAEDLPAPT*LSADPPSSWQGHPR
Trigger: CCGGGGATGTCCTTGCCATGAGCTGGGAGGGTCAGCGGAAAGGCACGTGGGAGCCGGCAAGTCCTCGGCTGCCCGCAGGTTTTCACTTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000608763.1
CDS GCA 90 bp TCCTGCCGTTTGCCGCAAGTGAAAACCTGCGGGCAGCCGAGGACTTaGCGGCTCCCACGTGCCTTTCCGCTGACCCTCCCAGCTCATGGC +
Preference number: 5 (lower is better)
Translates to: SCRLPQVKTCGQPRT*RLPRAFPLTLPAHG
Trigger: GCCATGAGCTGGGAGGGTCAGCGGAAAGGCACGTGGGAGCCGGCAAGTCCTCGGCTGCCCGCAGGTTTTCACTTGCGGCAAACGGCAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608763.1
CDS CCA 90 bp CCATTTCCCTGCCCTCCTCCCCTGACCGGGCAGCTCCCGGGGTGTTaGTGCACGCTTCTGATCAAGGCCCGGCTGGGAAGGCTGACTTCA +
Preference number: 5 (lower is better)
Translates to: PFPCPPPLTGQLPGC*CTLLIKARLGRLTS
Trigger: TGAAGTCAGCCTTCCCAGCCGGGCCTTGATCAGAAGCGTGCACCAACACCCCGGGAGCTGCCCGGTCAGGGGAGGAGGGCAGGGAAATGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610073.1
CDS GCA 90 bp ACCTCCAGGGTGGCCTCACCGTCCCTCAGCGAGACGGTGACCACGTaGTCTTGGCCGTCGCAGACCTTGATCTCCATTAGGGCCAAGGCC +
Preference number: 5 (lower is better)
Translates to: TSRVASPSLSETVTT*SWPSQTLISIRAKA
Trigger: GGCCTTGGCCCTAATGGAGATCAAGGTCTGCGACGGCCAAGAGCACGTGGTCACCGTCTCGCTGAGGGACGGTGAGGCCACCCTGGAGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327773.7
ENST00000480426.5
ENST00000608763.1
ENST00000610073.1
CDS CCA 90 bp GACTTGCCGGCTCCCACGTGCCTTTCCGCTGACCCTCCCAGCTCATaGCAAGGACATCCCCGGTCCCAGCCTCTGTGCTGTGTAGCCCAT +
Preference number: 5 (lower is better)
Translates to: DLPAPTCLSADPPSS*QGHPRSQPLCCVAH
Trigger: ATGGGCTACACAGCACAGAGGCTGGGACCGGGGATGTCCTTGCCATGAGCTGGGAGGGTCAGCGGAAAGGCACGTGGGAGCCGGCAAGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608763.1
CDS-3UTR CAA 90 bp ATAGAGAATTATTTTCTTCGAGCCCGCTCTGCGCTGCGCCGGCCTCCCCGCGCCATGTCCTGGGACAGCTaGAGGCCCCCACGCCCGTCA +
Preference number: 5 (lower is better)
Translates to: IENYFLRARSALRRPPRAMSWDS*RPPRPS
Trigger: TGACGGGCGTGGGGGCCTCAAGCTGTCCCAGGACAT...GGCGCGGGGAGGCCGGCGCAGCGCAGAGCGGGCTCGAAGAAAATAATTCTCTAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS-3UTR CAA 90 bp AGGAGCCCCCAGGCTCCTCCCGGCTGTCTCGGACAGAGACTGAGAAGCCTGCCGAAGGACTTCACACTCTaGGCCACGCTGAAGGGCACG +
Preference number: 5 (lower is better)
Translates to: RSPQAPPGCLGQRLRSLPKDFTL*ATLKGT
Trigger: CGTGCCCTTCAGCGTGGCCAAGAGTGTGAAGTCCTT...CGGCAGGCTTCTCAGTCTCTGTCCGAGACAGCCGGGAGGAGCCTGGGGGCTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS GCA 90 bp CTGGAAGCCCTGAACGTCGCAGCCCAGACCCAAGAGCCCCACGGCTaGATCCCAGGTCTGCGACTCCGAGAAGCTGTCCTGGTGACTCTT +
Preference number: 5 (lower is better)
Translates to: LEALNVAAQTQEPHG*IPGLRLREAVLVTL
Trigger: AAGAGTCACCAGGACAGCTTCTCGGAGTCGCAGACCTGGGATGCAGCCGTGGGGCTCTTGGGTCTGGGCTGCGACGTTCAGGGCTTCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480426.5
CDS CCA 90 bp AGGGTGGCCTCACCGTCCCTCAGCGAGACGGTGACCACGTGCTCTTaGCCGTCGCAGACCTTGATCTCCATTAGGGCCAAGGCCGTATGC +
Preference number: 5 (lower is better)
Translates to: RVASPSLSETVTTCS*PSQTLISIRAKAVC
Trigger: GCATACGGCCTTGGCCCTAATGGAGATCAAGGTCTGCGACGGCCAAGAGCACGTGGTCACCGTCTCGCTGAGGGACGGTGAGGCCACCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327773.7
ENST00000480426.5
ENST00000608763.1
ENST00000610073.1
CDS-3UTR CAA 90 bp ATAGAGAATTATTTTCTTCGAGCCCGCTCTGCGCTGCGCCGGCCTCCCCGCGCCTTCCTATCGCAGGGGTaGGGCGTGCACTGGTCAGGC +
Preference number: 5 (lower is better)
Translates to: IENYFLRARSALRRPPRAFLSQG*GVHWSG
Trigger: GCCTGACCAGTGCACGCCCAACCCCTGCGATAGGAA...GGCGCGGGGAGGCCGGCGCAGCGCAGAGCGGGCTCGAAGAAAATAATTCTCTAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS-3UTR CAA 90 bp AGGAGCCCCCAGGCTCCTCCCGGCTGTCTCGGACAGAGACTGAGAAGCCTGCCGGCACTCGTCTATGTCTaGGCAGGTCCTGCCATCAGA +
Preference number: 5 (lower is better)
Translates to: RSPQAPPGCLGQRLRSLPALVYV*AGPAIR
Trigger: TCTGATGGCAGGACCTGCCAAGACATAGACGAGTGC...CGGCAGGCTTCTCAGTCTCTGTCCGAGACAGCCGGGAGGAGCCTGGGGGCTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS TCA 90 bp GCCCAGAGCGCAAACAGCACGCCTGTGTCTGCGGCTGGGCGGATGTaGGCCACGACTTCTACTTCCCAGGTTGATTCAGTCCCGACGTCC +
Preference number: 5 (lower is better)
Translates to: AQSANSTPVSAAGRM*ATTSTSQVDSVPTS
Trigger: GGACGTCGGGACTGAATCAACCTGGGAAGTAGAAGTCGTGGCTCACATCCGCCCAGCCGCAGACACAGGCGTGCTGTTTGCGCTCTGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327773.7
ENST00000480426.5
ENST00000610073.1
CDS TCA 90 bp GCCAGGGTGAGCTGGACATCTCGCAGGGGTCCGACACCCTCTGCATaGGTACATGAGGCAGCGAGGCAAAGAACCTCAAGGCGAGGGCTG +
Preference number: 5 (lower is better)
Translates to: ARVSWTSRRGPTPSA*VHEAARQRTSRRGL
Trigger: CAGCCCTCGCCTTGAGGTTCTTTGCCTCGCTGCCTCATGTACTCATGCAGAGGGTGTCGGACCCCTGCGAGATGTCCAGCTCACCCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480426.5
CDS GCA 90 bp GCACGATCCAGGTGCTGTCCTGGTGGCCTCCGGCAAAGAGGAGGATaGCCTCGGGGTCAAAGGTCCGGAAGTCAAACTCAGCTACCAGCC +
Preference number: 5 (lower is better)
Translates to: ARSRCCPGGLRQRGG*PRGQRSGSQTQLPA
Trigger: GGCTGGTAGCTGAGTTTGACTTCCGGACCTTTGACCCCGAGGGCATCCTCCTCTTTGCCGGAGGCCACCAGGACAGCACCTGGATCGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327773.7
ENST00000480426.5
ENST00000610073.1
CDS GCA 90 bp TGGCAGCCAAGAGAGAAATCCTGCCGTTTGCCGCAAGTGAAAACCTaGGGGCAGCCGAGGACTTGCCGGCTCCCACGTGCCTTTCCGCTG +
Preference number: 5 (lower is better)
Translates to: WQPREKSCRLPQVKT*GQPRTCRLPRAFPL
Trigger: CAGCGGAAAGGCACGTGGGAGCCGGCAAGTCCTCGGCTGCCCGCAGGTTTTCACTTGCGGCAAACGGCAGGATTTCTCTCTTGGCTGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000608763.1
CDS CCA 90 bp CATGAGTACATGAGGCAGCGAGGCAAAGAACCTCAAGGCGAGGGCTaGCTGGAAGCCCTGAACGTCGCAGCCCAGACCCAAGAGCCCCAC +
Preference number: 5 (lower is better)
Translates to: HEYMRQRGKEPQGEG*LEALNVAAQTQEPH
Trigger: GTGGGGCTCTTGGGTCTGGGCTGCGACGTTCAGGGCTTCCAGCCAGCCCTCGCCTTGAGGTTCTTTGCCTCGCTGCCTCATGTACTCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480426.5
CDS CCA 90 bp TGTCTGTCGTATCCCAGCAAGCGGGAGGGCTCTGTGGCCCCGGGGTaGGCAGACTTGGAGAACGTGAGCCTCTCTGGTTTGACCCATGTC +
Preference number: 5 (lower is better)
Translates to: CLSYPSKREGSVAPG*ADLENVSLSGLTHV
Trigger: GACATGGGTCAAACCAGAGAGGCTCACGTTCTCCAAGTCTGCCCACCCCGGGGCCACAGAGCCCTCCCGCTTGCTGGGATACGACAGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000608763.1
CDS-3UTR CAA 90 bp AATAGAGAATTATTTTCTTCGAGCCCGCTCTGCGCTGCGCCGGCCTCCCCGCGCCTGGTCAGGCAGGTTTaGCACGCAGGTGGCGAAGCC +
Preference number: 5 (lower is better)
Translates to: NRELFSSSPLCAAPASPRLVRQV*HAGGEA
Trigger: GGCTTCGCCACCTGCGTGCAAAACCTGCCTGACCAG...GCGCGGGGAGGCCGGCGCAGCGCAGAGCGGGCTCGAAGAAAATAATTCTCTATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS-3UTR CAA 90 bp AGGAGCCCCCAGGCTCCTCCCGGCTGTCTCGGACAGAGACTGAGAAGCCTGCCGTCCTGGCTGCATTCGTaGACATCTTTGTCGCAGAGC +
Preference number: 5 (lower is better)
Translates to: RSPQAPPGCLGQRLRSLPSWLHS*TSLSQS
Trigger: GCTCTGCGACAAAGATGTCAACGAATGCAGCCAGGA...CGGCAGGCTTCTCAGTCTCTGTCCGAGACAGCCGGGAGGAGCCTGGGGGCTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS-3UTR CAA 90 bp AATAGAGAATTATTTTCTTCGAGCCCGCTCTGCGCTGCGCCGGCCTCCCCGCGCTGCCACATGCCATGGTaGATGACCGGGCCGCTGCTG +
Preference number: 5 (lower is better)
Translates to: NRELFSSSPLCAAPASPRCHMPW*MTGPLL
Trigger: CAGCAGCGGCCCGGTCATCAACCATGGCATGTGGCA...GCGCGGGGAGGCCGGCGCAGCGCAGAGCGGGCTCGAAGAAAATAATTCTCTATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS TCA 90 bp GTCTGCGGCTGGGCGGATGTGAGCCACGACTTCTACTTCCCAGGTTaGTTCAGTCCCGACGTCCAGAGGGGTCCGCATGTAGTCCAGGCT +
Preference number: 5 (lower is better)
Translates to: VCGWADVSHDFYFPG*FSPDVQRGPHVVQA
Trigger: AGCCTGGACTACATGCGGACCCCTCTGGACGTCGGGACTGAATCAACCTGGGAAGTAGAAGTCGTGGCTCACATCCGCCCAGCCGCAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327773.7
ENST00000480426.5
ENST00000610073.1
CDS TCA 90 bp GAGCTGGACATCTCGCAGGGGTCCGACACCCTCTGCATGAGTACATaGGGCAGCGAGGCAAAGAACCTCAAGGCGAGGGCTGGCTGGAAG +
Preference number: 5 (lower is better)
Translates to: ELDISQGSDTLCMST*GSEAKNLKARAGWK
Trigger: CTTCCAGCCAGCCCTCGCCTTGAGGTTCTTTGCCTCGCTGCCTCATGTACTCATGCAGAGGGTGTCGGACCCCTGCGAGATGTCCAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480426.5
CDS TCA 90 bp TCTGTGTCTGGCAGCCAAGAGAGAAATCCTGCCGTTTGCCGCAAGTaGAAACCTGCGGGCAGCCGAGGACTTGCCGGCTCCCACGTGCCT +
Preference number: 5 (lower is better)
Translates to: SVSGSQERNPAVCRK*KPAGSRGLAGSHVP
Trigger: AGGCACGTGGGAGCCGGCAAGTCCTCGGCTGCCCGCAGGTTTTCACTTGCGGCAAACGGCAGGATTTCTCTCTTGGCTGCCAGACACAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608763.1
CDS GCA 90 bp CACCAGCTGCTTCTTGAGTTTCTTCGTGGAGTGATAGTCTACCAGTaGCACAGAGAGAGGCACGGCACGGAGGTCGGGGGCCCAGAGCGC +
Preference number: 5 (lower is better)
Translates to: HQLLLEFLRGVIVYQ*HRERHGTEVGGPER
Trigger: GCGCTCTGGGCCCCCGACCTCCGTGCCGTGCCTCTCTCTGTGGCACTGGTAGACTATCACTCCACGAAGAAACTCAAGAAGCAGCTGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327773.7
ENST00000480426.5
ENST00000610073.1
CDS GCA 90 bp CCCCAGGCACAGGCCCAGGCTGAAGAGGAAAGACAAGAGCCGCCCTaGCCAGAAACGTCCACATGTGGGTACTGCATTCCTACCGGTGTG +
Preference number: 5 (lower is better)
Translates to: PQAQAQAEEERQEPP*PETSTCGYCIPTGV
Trigger: CACACCGGTAGGAATGCAGTACCCACATGTGGACGTTTCTGGGCAGGGCGGCTCTTGTCTTTCCTCTTCAGCCTGGGCCTGTGCCTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480426.5
CDS CCA 90 bp GCTTTACACAGGCAGAAGAAGTTGCCCATGAGGTCCTGGCAGGCTTaGGTCCCCTTCCTATCGCAGGGGTTGGGCGTGCACTGGTCAGGC +
Preference number: 5 (lower is better)
Translates to: ALHRQKKLPMRSWQA*VPFLSQGLGVHWSG
Trigger: GCCTGACCAGTGCACGCCCAACCCCTGCGATAGGAAGGGGACCCAAGCCTGCCAGGACCTCATGGGCAACTTCTTCTGCCTGTGTAAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS CCA 90 bp TCGAAGCCGCTGTGGCAGGAACAGTGGAAGCTACCCGGCTTGTTGTaGCAGATCTGGAGGCAGCCCCCGTTCTCCTGGCTGCATTCGTTG +
Preference number: 5 (lower is better)
Translates to: SKPLWQEQWKLPGLL*QIWRQPPFSWLHSL
Trigger: CAACGAATGCAGCCAGGAGAACGGGGGCTGCCTCCAGATCTGCCACAACAAGCCGGGTAGCTTCCACTGTTCCTGCCACAGCGGCTTCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS CCA 90 bp GGCAGGGTTTCCCTTTCTTCTCTAACTTCTCGGTCCCCGTTCGTTTaGCCGCAGACCCGGCAGACAAGCAGGAGGCATCTGCCAGCCTGG +
Preference number: 5 (lower is better)
Translates to: GRVSLSSLTSRSPFV*PQTRQTSRRHLPAW
Trigger: CCAGGCTGGCAGATGCCTCCTGCTTGTCTGCCGGGTCTGCGGCCAAACGAACGGGGACCGAGAAGTTAGAGAAGAAAGGGAAACCCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608763.1
CDS-3UTR CAA 90 bp GGGCCCACGGCTGAGTGCGCGGCGTCAGAGGCCCCAAGTCCATCTCACTATTTAGCATCCCTGTTGACCTaGATGACCAGATTCCGCGCC +
Preference number: 5 (lower is better)
Translates to: GPTAECAASEAPSPSHYLASLLT*MTRFRA
Trigger: GGCGCGGAATCTGGTCATCAAGGTCAACAGGGATGC...TAAATAGTGAGATGGACTTGGGGCCTCTGACGCCGCGCACTCAGCCGTGGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS-3UTR CAA 90 bp AATAGAGAATTATTTTCTTCGAGCCCGCTCTGCGCTGCGCCGGCCTCCCCGCGCTCCAGCAGCCTCCGGTaGACCTCCAGTGTCATGCAG +
Preference number: 5 (lower is better)
Translates to: NRELFSSSPLCAAPASPRSSSLR*TSSVMQ
Trigger: CTGCATGACACTGGAGGTCAACCGGAGGCTGCTGGA...GCGCGGGGAGGCCGGCGCAGCGCAGAGCGGGCTCGAAGAAAATAATTCTCTATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS TCA 90 bp ATGGGTGTGGACGAATGCTCCCTGAAGATGCAGGTTCGTGGGGCCTaGCTCAGGCCAATGCCGGCCCCCGTACGTGTTTCTCAGTCTCAG +
Preference number: 5 (lower is better)
Translates to: MGVDECSLKMQVRGA*LRPMPAPVRVSQSQ
Trigger: CTGAGACTGAGAAACACGTACGGGGGCCGGCATTGGCCTGAGTCAGGCCCCACGAACCTGCATCTTCAGGGAGCATTCGTCCACACCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000608763.1
CDS CCA 90 bp TGGTCTGATGGGTGTGGACGAATGCTCCCTGAAGATGCAGGTTCGTaGGGCCTGACTCAGGCCAATGCCGGCCCCCGTACGTGTTTCTCA +
Preference number: 5 (lower is better)
Translates to: WSDGCGRMLPEDAGS*GLTQANAGPRTCFS
Trigger: TGAGAAACACGTACGGGGGCCGGCATTGGCCTGAGTCAGGCCCCACGAACCTGCATCTTCAGGGAGCATTCGTCCACACCCATCAGACCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000608763.1
CDS TCA 90 bp AGGTCCTTCTCATGGAAGGGAATACCTCCCACGGTCAGGTTCAGATaGTACAGTCCTCGCTCCGGTTGGAACAAGTCCCCGGCCACCGCG +
Preference number: 5 (lower is better)
Translates to: RSFSWKGIPPTVRFR*YSPRSGWNKSPATA
Trigger: CGCGGTGGCCGGGGACTTGTTCCAACCGGAGCGAGGACTGTATCATCTGAACCTGACCGTGGGAGGTATTCCCTTCCATGAGAAGGACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327773.7
ENST00000480426.5
ENST00000610073.1
CDS-3UTR CAA 90 bp CCACGGCTGAGTGCGCGGCGTCAGAGGCCCCAAGTCCATCTCACTATTTACAGACACAGGCAGAAGAAGTaGCCCATGAGGTCCTGGCAG +
Preference number: 5 (lower is better)
Translates to: PRLSARRQRPQVHLTIYRHRQKK*PMRSWQ
Trigger: CTGCCAGGACCTCATGGGCAACTTCTTCTGCCTGTG...TCTGTAAATAGTGAGATGGACTTGGGGCCTCTGACGCCGCGCACTCAGCCGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS-3UTR CAA 90 bp ACGGCTGAGTGCGCGGCGTCAGAGGCCCCAAGTCCATCTCACTATTTACAGATAGTGGGCTGCAGCCTCTaGAAGCGCAGTCGGATCACG +
Preference number: 5 (lower is better)
Translates to: TAECAASEAPSPSHYLQIVGCSL*KRSRIT
Trigger: CGTGATCCGACTGCGCTTCAAGAGGCTGCAGCCCAC...TATCTGTAAATAGTGAGATGGACTTGGGGCCTCTGACGCCGCGCACTCAGCCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS-3UTR CAA 90 bp ACGGCTGAGTGCGCGGCGTCAGAGGCCCCAAGTCCATCTCACTATTTACAGATAGGTGACCACGTGCTCTaGGCCGTCGCAGACCTTGAT +
Preference number: 5 (lower is better)
Translates to: TAECAASEAPSPSHYLQIGDHVL*AVADLD
Trigger: ATCAAGGTCTGCGACGGCCAAGAGCACGTGGTCACC...TATCTGTAAATAGTGAGATGGACTTGGGGCCTCTGACGCCGCGCACTCAGCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS TCA 90 bp TCAGGCCAATGCCGGCCCCCGTACGTGTTTCTCAGTCTCAGCCAATaGCCTGACCAGCACCGAGACACCATAATAGCCACTAACGACCCA +
Preference number: 5 (lower is better)
Translates to: SGQCRPPYVFLSLSQ*PDQHRDTIIATNDP
Trigger: TGGGTCGTTAGTGGCTATTATGGTGTCTCGGTGCTGGTCAGGTCATTGGCTGAGACTGAGAAACACGTACGGGGGCCGGCATTGGCCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000608763.1
CDS GCA 90 bp CTGGGAGCACAGACAGTCCCATCGGTTAAACGTGATCTTCTTCTGTaGCCAGTGAGTCATTCAGGCTGCAGGCCTCCTGGCTCGCTCTCA +
Preference number: 5 (lower is better)
Translates to: LGAQTVPSVKRDLLL*PVSHSGCRPPGSLS
Trigger: TGAGAGCGAGCCAGGAGGCCTGCAGCCTGAATGACTCACTGGGCACAGAAGAAGATCACGTTTAACCGATGGGACTGTCTGTGCTCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608763.1
CDS-3UTR CAA 90 bp CCACGGCTGAGTGCGCGGCGTCAGAGGCCCCAAGTCCATCTCACTATTTACAGAGCGAAGCCTGAGTTTTaGGTGTACGGAGACCCATAC +
Preference number: 5 (lower is better)
Translates to: PRLSARRQRPQVHLTIYRAKPEF*VYGDPY
Trigger: GTATGGGTCTCCGTACACCAAAAACTCAGGCTTCGC...TCTGTAAATAGTGAGATGGACTTGGGGCCTCTGACGCCGCGCACTCAGCCGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS-3UTR CAA 90 bp ACGGCTGAGTGCGCGGCGTCAGAGGCCCCAAGTCCATCTCACTATTTACAGATAAAGCTACCCGGCTTGTaGTGGCAGATCTGGAGGCAG +
Preference number: 5 (lower is better)
Translates to: TAECAASEAPSPSHYLQIKLPGL*WQIWRQ
Trigger: CTGCCTCCAGATCTGCCACAACAAGCCGGGTAGCTT...TATCTGTAAATAGTGAGATGGACTTGGGGCCTCTGACGCCGCGCACTCAGCCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS-3UTR CAA 90 bp ACGGCTGAGTGCGCGGCGTCAGAGGCCCCAAGTCCATCTCACTATTTACAGATATGGAAGCTACCCGGCTaGTTGTGGCAGATCTGGAGG +
Preference number: 5 (lower is better)
Translates to: TAECAASEAPSPSHYLQIWKLPG*LWQIWR
Trigger: CCTCCAGATCTGCCACAACAAGCCGGGTAGCTTCCA...TATCTGTAAATAGTGAGATGGACTTGGGGCCTCTGACGCCGCGCACTCAGCCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS CCA 90 bp CCGAGAAGCACTGCATCCTCGTGTTCACTTTCACCGTTTCCTGGATaGTGGTGTCTTCTCCGTTCAGCCAGTTCCAGCTCCTCATGCAGC +
Preference number: 5 (lower is better)
Translates to: PRSTASSCSLSPFPG*WCLLRSASSSSSCS
Trigger: GCTGCATGAGGAGCTGGAACTGGCTGAACGGAGAAGACACCACCATCCAGGAAACGGTGAAAGTGAACACGAGGATGCAGTGCTTCTCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327773.7
ENST00000480426.5
ENST00000610073.1
CDS-3UTR CAA 90 bp AATAGAGAATTATTTTCTTCGAGCCCGCTCTGCGCTGCGCCGGCCTCCCCGCGCATGACAGCATCCCTGTaGACCTTGATGACCAGATTC +
Preference number: 5 (lower is better)
Translates to: NRELFSSSPLCAAPASPRMTASL*TLMTRF
Trigger: GAATCTGGTCATCAAGGTCAACAGGGATGCTGTCAT...GCGCGGGGAGGCCGGCGCAGCGCAGAGCGGGCTCGAAGAAAATAATTCTCTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS-3UTR CAA 90 bp AGTGCGCGGCGTCAGAGGCCCCAAGTCCATCTCACTATTTACAGATATGTTACAGTGATGTCGCTGTGCTaGTACGCCGCCTCGTCCAGG +
Preference number: 5 (lower is better)
Translates to: SARRQRPQVHLTIYRYVTVMSLC*YAASSR
Trigger: CCTGGACGAGGCGGCGTACAAGCACAGCGACATCAC...TGTAACATATCTGTAAATAGTGAGATGGACTTGGGGCCTCTGACGCCGCGCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS GCA 90 bp TTATTCCAGATGCTGAGATTGGGTCTGGCCCTGGTAACGAGCATTTaGATGAACCAAGCCTGTCTGTCGTATCCCAGCAAGCGGGAGGGC +
Preference number: 5 (lower is better)
Translates to: LFQMLRLGLALVTSI*MNQACLSYPSKREG
Trigger: GCCCTCCCGCTTGCTGGGATACGACAGACAGGCTTGGTTCATGCAAATGCTCGTTACCAGGGCCAGACCCAATCTCAGCATCTGGAATAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608763.1
CDS CCA 90 bp GTCACCGAGAAGCACTGCATCCTCGTGTTCACTTTCACCGTTTCCTaGATGGTGGTGTCTTCTCCGTTCAGCCAGTTCCAGCTCCTCATG +
Preference number: 5 (lower is better)
Translates to: VTEKHCILVFTFTVS*MVVSSPFSQFQLLM
Trigger: CATGAGGAGCTGGAACTGGCTGAACGGAGAAGACACCACCATCCAGGAAACGGTGAAAGTGAACACGAGGATGCAGTGCTTCTCGGTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327773.7
ENST00000480426.5
ENST00000610073.1
CDS CCA 90 bp GATATGGATGCCTTGAAGATGGCTGTCCTGGAAAGTTCCCTGTTCTaGGCTGTGGTTTCTCCACGCTGCCCGAAGGGGGACAGAACCAAA +
Preference number: 5 (lower is better)
Translates to: DMDALKMAVLESSLF*AVVSPRCPKGDRTK
Trigger: TTTGGTTCTGTCCCCCTTCGGGCAGCGTGGAGAAACCACAGCCCAGAACAGGGAACTTTCCAGGACAGCCATCTTCAAGGCATCCATATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480426.5
CDS-3UTR CAA 90 bp ACGGCTGAGTGCGCGGCGTCAGAGGCCCCAAGTCCATCTCACTATTTACAGATAGCTCCTCAACAGAGATaGTCTGCCACATGCCATGGT +
Preference number: 5 (lower is better)
Translates to: TAECAASEAPSPSHYLQIAPQQR*SATCHG
Trigger: ACCATGGCATGTGGCAGACAATCTCTGTTGAGGAGC...TATCTGTAAATAGTGAGATGGACTTGGGGCCTCTGACGCCGCGCACTCAGCCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS GCA 90 bp TTAAAACTAAGTGGAGTCTGTGTCTGGCAGCCAAGAGAGAAATCCTaGCGTTTGCCGCAAGTGAAAACCTGCGGGCAGCCGAGGACTTGC +
Preference number: 5 (lower is better)
Translates to: LKLSGVCVWQPREKS*RLPQVKTCGQPRTC
Trigger: GCAAGTCCTCGGCTGCCCGCAGGTTTTCACTTGCGGCAAACGGCAGGATTTCTCTCTTGGCTGCCAGACACAGACTCCACTTAGTTTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000608763.1
CDS CCA 90 bp AGAAGCACTGCATCCTCGTGTTCACTTTCACCGTTTCCTGGATGGTaGTGTCTTCTCCGTTCAGCCAGTTCCAGCTCCTCATGCAGCCAT +
Preference number: 5 (lower is better)
Translates to: RSTASSCSLSPFPGW*CLLRSASSSSSCSH
Trigger: ATGGCTGCATGAGGAGCTGGAACTGGCTGAACGGAGAAGACACCACCATCCAGGAAACGGTGAAAGTGAACACGAGGATGCAGTGCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327773.7
ENST00000480426.5
ENST00000610073.1
CDS-3UTR CAA 90 bp AGTGCGCGGCGTCAGAGGCCCCAAGTCCATCTCACTATTTACAGATATGTTACATGGCCGTCGCAGACCTaGATCTCCATTAGGGCCAAG +
Preference number: 5 (lower is better)
Translates to: SARRQRPQVHLTIYRYVTWPSQT*ISIRAK
Trigger: CTTGGCCCTAATGGAGATCAAGGTCTGCGACGGCCA...TGTAACATATCTGTAAATAGTGAGATGGACTTGGGGCCTCTGACGCCGCGCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS-3UTR CAA 90 bp CCACGGCTGAGTGCGCGGCGTCAGAGGCCCCAAGTCCATCTCACTATTTACAGATACGGAGACCCATACTaGTTGATGCAGTCTAAGTAT +
Preference number: 5 (lower is better)
Translates to: PRLSARRQRPQVHLTIYRYGDPY*LMQSKY
Trigger: ATACTTAGACTGCATCAACAAGTATGGGTCTCCGTA...TCTGTAAATAGTGAGATGGACTTGGGGCCTCTGACGCCGCGCACTCAGCCGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS GCA 90 bp TCGGTTAAACGTGATCTTCTTCTGTGCCCAGTGAGTCATTCAGGCTaGAGGCCTCCTGGCTCGCTCTCATCCTCTTCAAAGCTCTGTTTA +
Preference number: 5 (lower is better)
Translates to: SVKRDLLLCPVSHSG*RPPGSLSSSSKLCL
Trigger: TAAACAGAGCTTTGAAGAGGATGAGAGCGAGCCAGGAGGCCTGCAGCCTGAATGACTCACTGGGCACAGAAGAAGATCACGTTTAACCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608763.1
CDS-3UTR CAA 90 bp AGTGCGCGGCGTCAGAGGCCCCAAGTCCATCTCACTATTTACAGATATGTTACACTTCTACTTCCCAGGTaGATTCAGTCCCGACGTCCA +
Preference number: 5 (lower is better)
Translates to: SARRQRPQVHLTIYRYVTLLLPR*IQSRRP
Trigger: TGGACGTCGGGACTGAATCAACCTGGGAAGTAGAAG...TGTAACATATCTGTAAATAGTGAGATGGACTTGGGGCCTCTGACGCCGCGCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS CCA 90 bp TGGCTCGCTCTCATCCTCTTCAAAGCTCTGTTTATTAAAACTAAGTaGAGTCTGTGTCTGGCAGCCAAGAGAGAAATCCTGCCGTTTGCC +
Preference number: 5 (lower is better)
Translates to: WLALILFKALFIKTK*SLCLAAKREILPFA
Trigger: GGCAAACGGCAGGATTTCTCTCTTGGCTGCCAGACACAGACTCCACTTAGTTTTAATAAACAGAGCTTTGAAGAGGATGAGAGCGAGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608763.1
CDS-3UTR CAA 90 bp AGTGCGCGGCGTCAGAGGCCCCAAGTCCATCTCACTATTTACAGATATGTTACAGGAGACCCATACTTGTaGATGCAGTCTAAGTATCTT +
Preference number: 5 (lower is better)
Translates to: SARRQRPQVHLTIYRYVTGDPYL*MQSKYL
Trigger: AAGATACTTAGACTGCATCAACAAGTATGGGTCTCC...TGTAACATATCTGTAAATAGTGAGATGGACTTGGGGCCTCTGACGCCGCGCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS-3UTR CAA 90 bp AGTGCGCGGCGTCAGAGGCCCCAAGTCCATCTCACTATTTACAGATATGTTACATGCAGTCTAAGTATCTaGGGTAAAAATAATCCGTCT +
Preference number: 5 (lower is better)
Translates to: SARRQRPQVHLTIYRYVTCSLSI*GKNNPS
Trigger: AGACGGATTATTTTTACCCAAGATACTTAGACTGCA...TGTAACATATCTGTAAATAGTGAGATGGACTTGGGGCCTCTGACGCCGCGCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS TCA 90 bp CTTTTCCAGGGAAATTGGAAAACTGAGTTTGTTGCTGAAATCATCTaGCTTAAACACCAGAGACTAATTCAGATTGCTGTGAGCCACCAT +
Preference number: 5 (lower is better)
Translates to: LFQGNWKTEFVAEII*LKHQRLIQIAVSHH
Trigger: ATGGTGGCTCACAGCAATCTGAATTAGTCTCTGGTGTTTAAGTCAGATGATTTCAGCAACAAACTCAGTTTTCCAATTTCCCTGGAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000608763.1
CDS CCA 72 bp GAAAGGCGCGGCGCTGCCTGGGCCGCAGGAACTGCGTaGCCTCGCGCGCCGGCAACAGCGCGGCAAGCGCGC +
Preference number: 6 (lower is better)
Translates to: ERRGAAWAAGTA*PRAPATARQAR
Trigger: GCGCGCTTGCCGCGCTGTTGCCGGCGCGCGAGGCCACGCAGTTCCTGCGGCCCAGGCAGCGCCGCGCCTTTC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327773.7
ENST00000476291.1
CDS CCA 72 bp AGGACCCAGCCCTGCGGTGGCGGCCTCCCAGCCCGGTaGGCACTCACGCTGGCACCACAGCCCAGCAGCCCA +
Preference number: 6 (lower is better)
Translates to: RTQPCGGGLPAR*ALTLAPQPSSP
Trigger: TGGGCTGCTGGGCTGTGGTGCCAGCGTGAGTGCCCACCGGGCTGGGAGGCCGCCACCGCAGGGCTGGGTCCT
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608763.1
CDS GCA 72 bp CTCCGCAGGTGCCTCTCGAGCACGGCCAGCCTCTCCTaGAGCTGCGCGGCGCTCACCTCGCTCTGGCCCCTG +
Preference number: 6 (lower is better)
Translates to: LRRCLSSTASLS*SCAALTSLWPL
Trigger: CAGGGGCCAGAGCGAGGTGAGCGCCGCGCAGCTGCAGGAGAGGCTGGCCGTGCTCGAGAGGCACCTGCGGAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327773.7
ENST00000480426.5
ENST00000608763.1
ENST00000610073.1
CDS CCA 72 bp TGGCCTCCTCGAAGACCTGAAAGGCGCGGCGCTGCCTaGGCCGCAGGAACTGCGTGGCCTCGCGCGCCGGCA +
Preference number: 6 (lower is better)
Translates to: WPPRRPERRGAA*AAGTAWPRAPA
Trigger: TGCCGGCGCGCGAGGCCACGCAGTTCCTGCGGCCCAGGCAGCGCCGCGCCTTTCAGGTCTTCGAGGAGGCCA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327773.7
ENST00000476291.1
CDS CCA 72 bp CGGCCAACCGCAGCACAGCGGCATCTCAGACGGGGCTaGGGCAGGCGGCTGCAGGGACTGGCCAGGGCACCA +
Preference number: 6 (lower is better)
Translates to: RPTAAQRHLRRG*GRRLQGLARAP
Trigger: TGGTGCCCTGGCCAGTCCCTGCAGCCGCCTGCCCCAGCCCCGTCTGAGATGCCGCTGTGCTGCGGTTGGCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610073.1
CDS TCA 72 bp GCCCCCAGGCTCCTCCCGGCTGTCTCGGACAGAGACTaGGAAGCCTGCCGCGTCCCGTGGGGGCCTAGGCTG +
Preference number: 6 (lower is better)
Translates to: APRLLPAVSDRD*EACRVPWGPRL
Trigger: CAGCCTAGGCCCCCACGGGACGCGGCAGGCTTCTCAGTCTCTGTCCGAGACAGCCGGGAGGAGCCTGGGGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000327773.7
ENST00000480426.5
ENST00000608763.1
ENST00000610073.1
CDS CCA 72 bp AGCCTCTCCTGCAGCTGCGCGGCGCTCACCTCGCTCTaGCCCCTGGTGCCGTCCACCTCCAGGGTGGCCTCA +
Preference number: 6 (lower is better)
Translates to: SLSCSCAALTSL*PLVPSTSRVAS
Trigger: TGAGGCCACCCTGGAGGTGGACGGCACCAGGGGCCAGAGCGAGGTGAGCGCCGCGCAGCTGCAGGAGAGGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327773.7
ENST00000480426.5
ENST00000608763.1
ENST00000610073.1
CDS GCA 72 bp TTGGCCACGCTGAAGGGCACGCACGGCAAGATGTCCTaGCACGGACGGGGGCCACGCCGGTCGGGGATGTGG +
Preference number: 6 (lower is better)
Translates to: LATLKGTHGKMS*HGRGPRRSGMW
Trigger: CCACATCCCCGACCGGCGTGGCCCCCGTCCGTGGCAGGACATCTTGCCGTGCGTGCCCTTCAGCGTGGCCAA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480426.5
CDS GCA 72 bp GCCAAGGCCGTATGCTCCACGGCCAGGACCACCAGCTaGAGGAGACCGAGGTGTGGTCAGGGCCTGCCGGCC +
Preference number: 6 (lower is better)
Translates to: AKAVCSTARTTS*RRPRCGQGLPA
Trigger: GGCCGGCAGGCCCTGACCACACCTCGGTCTCCTGCAGCTGGTGGTCCTGGCCGTGGAGCATACGGCCTTGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608763.1
CDS GCA 72 bp CTGCTAACAGCTGCGGTGACAGCCGCGGGTCCCAACTaGAGCCTGGCCCGAGGTCTGCCCAGCCCTCTCCCC +
Preference number: 6 (lower is better)
Translates to: LLTAAVTAAGPN*SLARGLPSPLP
Trigger: GGGGAGAGGGCTGGGCAGACCTCGGGCCAGGCTGCAGTTGGGACCCGCGGCTGTCACCGCAGCTGTTAGCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608763.1
CDS TCA 72 bp CTCTCCAGGTGGCCCTGCTTGGCCTCCTCGAAGACCTaGAAGGCGCGGCGCTGCCTGGGCCGCAGGAACTGC +
Preference number: 6 (lower is better)
Translates to: LSRWPCLASSKT*KARRCLGRRNC
Trigger: GCAGTTCCTGCGGCCCAGGCAGCGCCGCGCCTTTCAGGTCTTCGAGGAGGCCAAGCAGGGCCACCTGGAGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327773.7
ENST00000476291.1
CDS GCA 72 bp CCTCCTCCCCTGACCGGGCAGCTCCCGGGGTGTTGGTaGACGCTTCTGATCAAGGCCCGGCTGGGAAGGCTG +
Preference number: 6 (lower is better)
Translates to: PPPLTGQLPGCW*TLLIKARLGRL
Trigger: CAGCCTTCCCAGCCGGGCCTTGATCAGAAGCGTGCACCAACACCCCGGGAGCTGCCCGGTCAGGGGAGGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610073.1
CDS CCA 72 bp CCGGCTCTCAGGGCCAGCACGATCCAGGTGCTGTCCTaGTGGCCTCCGGCAAAGAGGAGGATGCCCTCGGGG +
Preference number: 6 (lower is better)
Translates to: PALRASTIQVLS*WPPAKRRMPSG
Trigger: CCCCGAGGGCATCCTCCTCTTTGCCGGAGGCCACCAGGACAGCACCTGGATCGTGCTGGCCCTGAGAGCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327773.7
ENST00000480426.5
ENST00000610073.1
CDS CCA 72 bp CACGGCCAGGACCACCAGCTGCAGGAGACCGAGGTGTaGTCAGGGCCTGCCGGCCACCCCTACGTGAGCTGT +
Preference number: 6 (lower is better)
Translates to: HGQDHQLQETEV*SGPAGHPYVSC
Trigger: ACAGCTCACGTAGGGGTGGCCGGCAGGCCCTGACCACACCTCGGTCTCCTGCAGCTGGTGGTCCTGGCCGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608763.1
CDS TCA 72 bp AAGTCACCGGCACATCTGGCAGGCCGCCAGCAAAGGTaGGCACGGGGCTCCGCAGGTGCCTCTCGAGCACGG +
Preference number: 6 (lower is better)
Translates to: KSPAHLAGRQQR*ARGSAGASRAR
Trigger: CCGTGCTCGAGAGGCACCTGCGGAGCCCCGTGCTCACCTTTGCTGGCGGCCTGCCAGATGTGCCGGTGACTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327773.7
ENST00000480426.5
ENST00000610073.1
CDS CAA 90 bp CCCATTTCCCTGCCCTCCTCCCCTGACCGGGCAGCTCCCGGGGTGTaGGTGCACGCTTCTGATCAAGGCCCGGCTGGGAAGGCTGACTTC +
Preference number: 6 (lower is better)
Translates to: PISLPSSPDRAAPGV*VHASDQGPAGKADF
Trigger: GAAGTCAGCCTTCCCAGCCGGGCCTTGATCAGAAGCGTGCACCAACACCCCGGGAGCTGCCCGGTCAGGGGAGGAGGGCAGGGAAATGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610073.1
CDS TCA 72 bp TGTACGCCGCCTCGTCCAGGTCCAGCAGCCTCCGGTTaGCCTCCAGTGTCATGCAGCCGCGGTAGAACGCGG +
Preference number: 6 (lower is better)
Translates to: CTPPRPGPAASG*PPVSCSRGRTR
Trigger: CCGCGTTCTACCGCGGCTGCATGACACTGGAGGTCAACCGGAGGCTGCTGGACCTGGACGAGGCGGCGTACA
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327773.7
ENST00000480426.5
ENST00000608763.1
ENST00000610073.1
CDS TCA 72 bp AGCCGAGGACTTGCCGGCTCCCACGTGCCTTTCCGCTaGCCCTCCCAGCTCATGGCAAGGACATCCCCGGTC +
Preference number: 6 (lower is better)
Translates to: SRGLAGSHVPFR*PSQLMARTSPV
Trigger: GACCGGGGATGTCCTTGCCATGAGCTGGGAGGGTCAGCGGAAAGGCACGTGGGAGCCGGCAAGTCCTCGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608763.1
CDS CCA 72 bp GCTCTCAGGGCCAGCACGATCCAGGTGCTGTCCTGGTaGCCTCCGGCAAAGAGGAGGATGCCCTCGGGGTCA +
Preference number: 6 (lower is better)
Translates to: ALRASTIQVLSW*PPAKRRMPSGS
Trigger: TGACCCCGAGGGCATCCTCCTCTTTGCCGGAGGCCACCAGGACAGCACCTGGATCGTGCTGGCCCTGAGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327773.7
ENST00000480426.5
ENST00000610073.1
CDS CCA 72 bp GACACGGCAGGACGCCCTGCTGGACATGGGAGGGGCTaGCGGTCACTCTGTTCGCTGCTAACAGCTGCGGTG +
Preference number: 6 (lower is better)
Translates to: DTAGRPAGHGRG*RSLCSLLTAAV
Trigger: CACCGCAGCTGTTAGCAGCGAACAGAGTGACCGCCAGCCCCTCCCATGTCCAGCAGGGCGTCCTGCCGTGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608763.1
CDS CCA 72 bp ACATCCCCGGTCCCAGCCTCTGTGCTGTGTAGCCCATaGGACACGGCAGGACGCCCTGCTGGACATGGGAGG +
Preference number: 6 (lower is better)
Translates to: TSPVPASVLCSP*DTAGRPAGHGR
Trigger: CCTCCCATGTCCAGCAGGGCGTCCTGCCGTGTCCCATGGGCTACACAGCACAGAGGCTGGGACCGGGGATGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608763.1
CDS TCA 72 bp GCAAAGAACCTCAAGGCGAGGGCTGGCTGGAAGCCCTaGACGTCGCAGCCCAGACCCAAGAGCCCCACGGCT +
Preference number: 6 (lower is better)
Translates to: AKNLKARAGWKP*TSQPRPKSPTA
Trigger: AGCCGTGGGGCTCTTGGGTCTGGGCTGCGACGTTCAGGGCTTCCAGCCAGCCCTCGCCTTGAGGTTCTTTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480426.5
CDS TCA 72 bp CCGAGGTGTGGTCAGGGCCTGCCGGCCACCCCTACGTaGGCTGTTAGGTCCAAGCTGGTCCTCACAGCTGCT +
Preference number: 6 (lower is better)
Translates to: PRCGQGLPATPT*AVRSKLVLTAA
Trigger: AGCAGCTGTGAGGACCAGCTTGGACCTAACAGCTCACGTAGGGGTGGCCGGCAGGCCCTGACCACACCTCGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608763.1
CDS GCA 72 bp GTTCTTGCAGCGCGCCTCCCCGCAGGCCTCCGAGTCTaGGCACTCGTCTATGTCTTGGCAGGTCCTGCCATC +
Preference number: 6 (lower is better)
Translates to: VLAARLPAGLRV*ALVYVLAGPAI
Trigger: GATGGCAGGACCTGCCAAGACATAGACGAGTGCGCAGACTCGGAGGCCTGCGGGGAGGCGCGCTGCAAGAAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS GCA 72 bp GTCGGGGGCCCAGAGCGCAAACAGCACGCCTGTGTCTaGGGCTGGGCGGATGTGAGCCACGACTTCTACTTC +
Preference number: 6 (lower is better)
Translates to: VGGPERKQHACV*GWADVSHDFYF
Trigger: GAAGTAGAAGTCGTGGCTCACATCCGCCCAGCCGCAGACACAGGCGTGCTGTTTGCGCTCTGGGCCCCCGAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327773.7
ENST00000480426.5
ENST00000610073.1
CDS GCA 72 bp CTGAACGTCGCAGCCCAGACCCAAGAGCCCCACGGCTaGATCCCAGGTCTGCGACTCCGAGAAGCTGTCCTG +
Preference number: 6 (lower is better)
Translates to: LNVAAQTQEPHG*IPGLRLREAVL
Trigger: CAGGACAGCTTCTCGGAGTCGCAGACCTGGGATGCAGCCGTGGGGCTCTTGGGTCTGGGCTGCGACGTTCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480426.5
CDS GCA 72 bp TTGCCGCAAGTGAAAACCTGCGGGCAGCCGAGGACTTaGCGGCTCCCACGTGCCTTTCCGCTGACCCTCCCA +
Preference number: 6 (lower is better)
Translates to: LPQVKTCGQPRT*RLPRAFPLTLP
Trigger: TGGGAGGGTCAGCGGAAAGGCACGTGGGAGCCGGCAAGTCCTCGGCTGCCCGCAGGTTTTCACTTGCGGCAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608763.1
CDS CCA 72 bp GGGTGTGGACGAATGCTCCCTGAAGATGCAGGTTCGTaGGGCCTGACTCAGGCCAATGCCGGCCCCCGTACG +
Preference number: 6 (lower is better)
Translates to: GCGRMLPEDAGS*GLTQANAGPRT
Trigger: CGTACGGGGGCCGGCATTGGCCTGAGTCAGGCCCCACGAACCTGCATCTTCAGGGAGCATTCGTCCACACCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000608763.1
CDS CCA 72 bp GCTCCCACGTGCCTTTCCGCTGACCCTCCCAGCTCATaGCAAGGACATCCCCGGTCCCAGCCTCTGTGCTGT +
Preference number: 6 (lower is better)
Translates to: APTCLSADPPSS*QGHPRSQPLCC
Trigger: ACAGCACAGAGGCTGGGACCGGGGATGTCCTTGCCATGAGCTGGGAGGGTCAGCGGAAAGGCACGTGGGAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608763.1
CDS CAA 72 bp TTTGCCGCAAGTGAAAACCTGCGGGCAGCCGAGGACTaGCCGGCTCCCACGTGCCTTTCCGCTGACCCTCCC +
Preference number: 6 (lower is better)
Translates to: FAASENLRAAED*PAPTCLSADPP
Trigger: GGGAGGGTCAGCGGAAAGGCACGTGGGAGCCGGCAAGTCCTCGGCTGCCCGCAGGTTTTCACTTGCGGCAAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608763.1
CDS CAA 90 bp ATCCTGCCGTTTGCCGCAAGTGAAAACCTGCGGGCAGCCGAGGACTaGCCGGCTCCCACGTGCCTTTCCGCTGACCCTCCCAGCTCATGG +
Preference number: 6 (lower is better)
Translates to: ILPFAASENLRAAED*PAPTCLSADPPSSW
Trigger: CCATGAGCTGGGAGGGTCAGCGGAAAGGCACGTGGGAGCCGGCAAGTCCTCGGCTGCCCGCAGGTTTTCACTTGCGGCAAACGGCAGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608763.1
CDS TCA 72 bp TGTCATGCAGCCGCGGTAGAACGCGGTGACTGGCGCTaGAGTCACCGGCACATCTGGCAGGCCGCCAGCAAA +
Preference number: 6 (lower is better)
Translates to: CHAAAVERGDWR*SHRHIWQAASK
Trigger: TTTGCTGGCGGCCTGCCAGATGTGCCGGTGACTTCAGCGCCAGTCACCGCGTTCTACCGCGGCTGCATGACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327773.7
ENST00000480426.5
ENST00000610073.1
CDS TCA 72 bp TGTCATGCAGCCGCGGTAGAACGCGGTGACTGGCGCTaGAGTCACCGGCACATCTGGGCCGCAGGGAGAGAA +
Preference number: 6 (lower is better)
Translates to: CHAAAVERGDWR*SHRHIWAAGRE
Trigger: TTCTCTCCCTGCGGCCCAGATGTGCCGGTGACTTCAGCGCCAGTCACCGCGTTCTACCGCGGCTGCATGACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608763.1
CDS GCA 72 bp CCTGGGGAGTTCACGCAGACCTGCTCACAGCGGCCCTaGAGACACTCGTCCACATCTCGGCAAGCCTTCTCC +
Preference number: 6 (lower is better)
Translates to: PGEFTQTCSQRP*RHSSTSRQAFS
Trigger: GGAGAAGGCTTGCCGAGATGTGGACGAGTGTCTGCAGGGCCGCTGTGAGCAGGTCTGCGTGAACTCCCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327773.7
ENST00000610073.1
CDS CCA 72 bp ACGCACGGCAAGATGTCCTCACAGGTGTCCATGTCCTaGGACAGCTTGAGGCCCCCACGCCCGTCACAGTGG +
Preference number: 6 (lower is better)
Translates to: THGKMSSQVSMS*DSLRPPRPSQW
Trigger: CCACTGTGACGGGCGTGGGGGCCTCAAGCTGTCCCAGGACATGGACACCTGTGAGGACATCTTGCCGTGCGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327773.7
ENST00000610073.1
CDS CCA 72 bp GGCCCAGAGCGCAAACAGCACGCCTGTGTCTGCGGCTaGGCGGATGTGAGCCACGACTTCTACTTCCCAGGT +
Preference number: 6 (lower is better)
Translates to: GPERKQHACVCG*ADVSHDFYFPG
Trigger: ACCTGGGAAGTAGAAGTCGTGGCTCACATCCGCCCAGCCGCAGACACAGGCGTGCTGTTTGCGCTCTGGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327773.7
ENST00000480426.5
ENST00000610073.1
CDS CCA 72 bp TATCCCAGCAAGCGGGAGGGCTCTGTGGCCCCGGGGTaGGCAGACTTGGAGAACGTGAGCCTCTCTGGTTTG +
Preference number: 6 (lower is better)
Translates to: YPSKREGSVAPG*ADLENVSLSGL
Trigger: CAAACCAGAGAGGCTCACGTTCTCCAAGTCTGCCCACCCCGGGGCCACAGAGCCCTCCCGCTTGCTGGGATA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000608763.1
CDS CAA 72 bp CCGCTGTGGCAGGAACAGTGGAAGCTACCCGGCTTGTaGTGGCAGATCTGGAGGCAGCCCCCGTTCTCCTGG +
Preference number: 6 (lower is better)
Translates to: PLWQEQWKLPGL*WQIWRQPPFSW
Trigger: CCAGGAGAACGGGGGCTGCCTCCAGATCTGCCACAACAAGCCGGGTAGCTTCCACTGTTCCTGCCACAGCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS CAA 72 bp AAGCGGGAGGGCTCTGTGGCCCCGGGGTGGGCAGACTaGGAGAACGTGAGCCTCTCTGGTTTGACCCATGTC +
Preference number: 6 (lower is better)
Translates to: KREGSVAPGWAD*ENVSLSGLTHV
Trigger: GACATGGGTCAAACCAGAGAGGCTCACGTTCTCCAAGTCTGCCCACCCCGGGGCCACAGAGCCCTCCCGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000608763.1
CDS CAA 90 bp TCCCTCAGCGAGACGGTGACCACGTGCTCTTGGCCGTCGCAGACCTaGATCTCCATTAGGGCCAAGGCCGTATGCTCCACGGCCAGGACC +
Preference number: 6 (lower is better)
Translates to: SLSETVTTCSWPSQT*ISIRAKAVCSTART
Trigger: GGTCCTGGCCGTGGAGCATACGGCCTTGGCCCTAATGGAGATCAAGGTCTGCGACGGCCAAGAGCACGTGGTCACCGTCTCGCTGAGGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327773.7
ENST00000480426.5
ENST00000608763.1
ENST00000610073.1
CDS CAA 90 bp AGCTCGAAGCCGCTGTGGCAGGAACAGTGGAAGCTACCCGGCTTGTaGTGGCAGATCTGGAGGCAGCCCCCGTTCTCCTGGCTGCATTCG +
Preference number: 6 (lower is better)
Translates to: SSKPLWQEQWKLPGL*WQIWRQPPFSWLHS
Trigger: CGAATGCAGCCAGGAGAACGGGGGCTGCCTCCAGATCTGCCACAACAAGCCGGGTAGCTTCCACTGTTCCTGCCACAGCGGCTTCGAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS CAA 90 bp GAGAGCTCGAAGCCGCTGTGGCAGGAACAGTGGAAGCTACCCGGCTaGTTGTGGCAGATCTGGAGGCAGCCCCCGTTCTCCTGGCTGCAT +
Preference number: 6 (lower is better)
Translates to: ESSKPLWQEQWKLPG*LWQIWRQPPFSWLH
Trigger: ATGCAGCCAGGAGAACGGGGGCTGCCTCCAGATCTGCCACAACAAGCCGGGTAGCTTCCACTGTTCCTGCCACAGCGGCTTCGAGCTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS CAA 90 bp GGGGTCCCACTGAACATCCGGCCCAGGTACAAGGACTTCACACTCTaGGCCACGCTGAAGGGCACGCACGGCAAGATGTCCTGCCACGGA +
Preference number: 6 (lower is better)
Translates to: GVPLNIRPRYKDFTL*ATLKGTHGKMSCHG
Trigger: TCCGTGGCAGGACATCTTGCCGTGCGTGCCCTTCAGCGTGGCCAAGAGTGTGAAGTCCTTGTACCTGGGCCGGATGTTCAGTGGGACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480426.5
CDS CAA 90 bp TATCCCAGCAAGCGGGAGGGCTCTGTGGCCCCGGGGTGGGCAGACTaGGAGAACGTGAGCCTCTCTGGTTTGACCCATGTCTCCCTCCTT +
Preference number: 6 (lower is better)
Translates to: YPSKREGSVAPGWAD*ENVSLSGLTHVSLL
Trigger: AAGGAGGGAGACATGGGTCAAACCAGAGAGGCTCACGTTCTCCAAGTCTGCCCACCCCGGGGCCACAGAGCCCTCCCGCTTGCTGGGATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000608763.1
CDS TCA 72 bp AGATGTCCTCACAGGTGTCCATGTCCTGGGACAGCTTaGGGCCCCCACGCCCGTCACAGTGGCAGGTGTAGC +
Preference number: 6 (lower is better)
Translates to: RCPHRCPCPGTA*GPHARHSGRCS
Trigger: GCTACACCTGCCACTGTGACGGGCGTGGGGGCCTCAAGCTGTCCCAGGACATGGACACCTGTGAGGACATCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327773.7
ENST00000610073.1
CDS TCA 72 bp GGCCCAGGTACAAGGACTTCACACTCTTGGCCACGCTaGAGGGCACGCACGGCAAGATGTCCTGCCACGGAC +
Preference number: 6 (lower is better)
Translates to: GPGTRTSHSWPR*RARTARCPATD
Trigger: GTCCGTGGCAGGACATCTTGCCGTGCGTGCCCTTCAGCGTGGCCAAGAGTGTGAAGTCCTTGTACCTGGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480426.5
CDS TCA 72 bp GGCAGCCAAGAGAGAAATCCTGCCGTTTGCCGCAAGTaGAAACCTGCGGGCAGCCGAGGACTTGCCGGCTCC +
Preference number: 6 (lower is better)
Translates to: GSQERNPAVCRK*KPAGSRGLAGS
Trigger: GGAGCCGGCAAGTCCTCGGCTGCCCGCAGGTTTTCACTTGCGGCAAACGGCAGGATTTCTCTCTTGGCTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608763.1
CDS GCA 72 bp GTGGCCTCACCGTCCCTCAGCGAGACGGTGACCACGTaGTCTTGGCCGTCGCAGACCTTGATCTCCATTAGG +
Preference number: 6 (lower is better)
Translates to: VASPSLSETVTT*SWPSQTLISIR
Trigger: CCTAATGGAGATCAAGGTCTGCGACGGCCAAGAGCACGTGGTCACCGTCTCGCTGAGGGACGGTGAGGCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327773.7
ENST00000480426.5
ENST00000608763.1
ENST00000610073.1
CDS CCA 72 bp AGGCAGAAGAAGTTGCCCATGAGGTCCTGGCAGGCTTaGGTCCCCTTCCTATCGCAGGGGTTGGGCGTGCAC +
Preference number: 6 (lower is better)
Translates to: RQKKLPMRSWQA*VPFLSQGLGVH
Trigger: GTGCACGCCCAACCCCTGCGATAGGAAGGGGACCCAAGCCTGCCAGGACCTCATGGGCAACTTCTTCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS CCA 72 bp CTGTGGCAGGAACAGTGGAAGCTACCCGGCTTGTTGTaGCAGATCTGGAGGCAGCCCCCGTTCTCCTGGCTG +
Preference number: 6 (lower is better)
Translates to: LWQEQWKLPGLL*QIWRQPPFSWL
Trigger: CAGCCAGGAGAACGGGGGCTGCCTCCAGATCTGCCACAACAAGCCGGGTAGCTTCCACTGTTCCTGCCACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS CCA 72 bp ATGAGGCAGCGAGGCAAAGAACCTCAAGGCGAGGGCTaGCTGGAAGCCCTGAACGTCGCAGCCCAGACCCAA +
Preference number: 6 (lower is better)
Translates to: MRQRGKEPQGEG*LEALNVAAQTQ
Trigger: TTGGGTCTGGGCTGCGACGTTCAGGGCTTCCAGCCAGCCCTCGCCTTGAGGTTCTTTGCCTCGCTGCCTCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480426.5
CDS CAA 72 bp AAGCCGCTGTGGCAGGAACAGTGGAAGCTACCCGGCTaGTTGTGGCAGATCTGGAGGCAGCCCCCGTTCTCC +
Preference number: 6 (lower is better)
Translates to: KPLWQEQWKLPG*LWQIWRQPPFS
Trigger: GGAGAACGGGGGCTGCCTCCAGATCTGCCACAACAAGCCGGGTAGCTTCCACTGTTCCTGCCACAGCGGCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS CAA 90 bp GGGGTCCCACTGAACATCCGGCCCAGGTACAAGGACTTCACACTCTaGGCCACGCTGAAGGGCACGCACGGCAAGATGTCCTCACAGGTG +
Preference number: 6 (lower is better)
Translates to: GVPLNIRPRYKDFTL*ATLKGTHGKMSSQV
Trigger: CACCTGTGAGGACATCTTGCCGTGCGTGCCCTTCAGCGTGGCCAAGAGTGTGAAGTCCTTGTACCTGGGCCGGATGTTCAGTGGGACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327773.7
ENST00000610073.1
CDS CAA 90 bp TGTCTGCGGCTGGGCGGATGTGAGCCACGACTTCTACTTCCCAGGTaGATTCAGTCCCGACGTCCAGAGGGGTCCGCATGTAGTCCAGGC +
Preference number: 6 (lower is better)
Translates to: CLRLGGCEPRLLLPR*IQSRRPEGSACSPG
Trigger: GCCTGGACTACATGCGGACCCCTCTGGACGTCGGGACTGAATCAACCTGGGAAGTAGAAGTCGTGGCTCACATCCGCCCAGCCGCAGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327773.7
ENST00000480426.5
ENST00000610073.1
CDS CAA 90 bp GGGCAGGGTTTCCCTTTCTTCTCTAACTTCTCGGTCCCCGTTCGTTaGGCCGCAGACCCGGCAGACAAGCAGGAGGCATCTGCCAGCCTG +
Preference number: 6 (lower is better)
Translates to: GQGFPFFSNFSVPVR*AADPADKQEASASL
Trigger: CAGGCTGGCAGATGCCTCCTGCTTGTCTGCCGGGTCTGCGGCCAAACGAACGGGGACCGAGAAGTTAGAGAAGAAAGGGAAACCCTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608763.1
CDS TCA 72 bp GACGAATGCTCCCTGAAGATGCAGGTTCGTGGGGCCTaGCTCAGGCCAATGCCGGCCCCCGTACGTGTTTCT +
Preference number: 6 (lower is better)
Translates to: DECSLKMQVRGA*LRPMPAPVRVS
Trigger: AGAAACACGTACGGGGGCCGGCATTGGCCTGAGTCAGGCCCCACGAACCTGCATCTTCAGGGAGCATTCGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000608763.1
CDS GCA 72 bp AGGTGCTGTCCTGGTGGCCTCCGGCAAAGAGGAGGATaGCCTCGGGGTCAAAGGTCCGGAAGTCAAACTCAG +
Preference number: 6 (lower is better)
Translates to: RCCPGGLRQRGG*PRGQRSGSQTQ
Trigger: CTGAGTTTGACTTCCGGACCTTTGACCCCGAGGGCATCCTCCTCTTTGCCGGAGGCCACCAGGACAGCACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327773.7
ENST00000480426.5
ENST00000610073.1
CDS CCA 72 bp TCACCGTCCCTCAGCGAGACGGTGACCACGTGCTCTTaGCCGTCGCAGACCTTGATCTCCATTAGGGCCAAG +
Preference number: 6 (lower is better)
Translates to: SPSLSETVTTCS*PSQTLISIRAK
Trigger: CTTGGCCCTAATGGAGATCAAGGTCTGCGACGGCCAAGAGCACGTGGTCACCGTCTCGCTGAGGGACGGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327773.7
ENST00000480426.5
ENST00000608763.1
ENST00000610073.1
CDS CAA 72 bp TCAAACTCAGCTACCAGCCTGGTGGGCTGCAGCCTCTaGAAGCGCAGTCGGATCACGGGGGTCCCACTGAAC +
Preference number: 6 (lower is better)
Translates to: SNSATSLVGCSL*KRSRITGVPLN
Trigger: GTTCAGTGGGACCCCCGTGATCCGACTGCGCTTCAAGAGGCTGCAGCCCACCAGGCTGGTAGCTGAGTTTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327773.7
ENST00000480426.5
ENST00000610073.1
CDS CAA 72 bp GAGACGGTGACCACGTGCTCTTGGCCGTCGCAGACCTaGATCTCCATTAGGGCCAAGGCCGTATGCTCCACG +
Preference number: 6 (lower is better)
Translates to: ETVTTCSWPSQT*ISIRAKAVCST
Trigger: CGTGGAGCATACGGCCTTGGCCCTAATGGAGATCAAGGTCTGCGACGGCCAAGAGCACGTGGTCACCGTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327773.7
ENST00000480426.5
ENST00000608763.1
ENST00000610073.1
CDS CAA 90 bp AGCTTTACACAGGCAGAAGAAGTTGCCCATGAGGTCCTGGCAGGCTaGGGTCCCCTTCCTATCGCAGGGGTTGGGCGTGCACTGGTCAGG +
Preference number: 6 (lower is better)
Translates to: SFTQAEEVAHEVLAG*GPLPIAGVGRALVR
Trigger: CCTGACCAGTGCACGCCCAACCCCTGCGATAGGAAGGGGACCCAAGCCTGCCAGGACCTCATGGGCAACTTCTTCTGCCTGTGTAAAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS TCA 72 bp CCCAGCCAGCTTTACACAGGCAGAAGAAGTTGCCCATaGGGTCCTGGCAGGCTTGGGTCCCCTTCCTATCGC +
Preference number: 6 (lower is better)
Translates to: PSQLYTGRRSCP*GPGRLGSPSYR
Trigger: GCGATAGGAAGGGGACCCAAGCCTGCCAGGACCTCATGGGCAACTTCTTCTGCCTGTGTAAAGCTGGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS TCA 72 bp GGCCCAGGTACAAGGACTTCACACTCTTGGCCACGCTaGAGGGCACGCACGGCAAGATGTCCTCACAGGTGT +
Preference number: 6 (lower is better)
Translates to: GPGTRTSHSWPR*RARTARCPHRC
Trigger: ACACCTGTGAGGACATCTTGCCGTGCGTGCCCTTCAGCGTGGCCAAGAGTGTGAAGTCCTTGTACCTGGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327773.7
ENST00000610073.1
CDS TCA 72 bp ATCTCGCAGGGGTCCGACACCCTCTGCATGAGTACATaGGGCAGCGAGGCAAAGAACCTCAAGGCGAGGGCT +
Preference number: 6 (lower is better)
Translates to: ISQGSDTLCMST*GSEAKNLKARA
Trigger: AGCCCTCGCCTTGAGGTTCTTTGCCTCGCTGCCTCATGTACTCATGCAGAGGGTGTCGGACCCCTGCGAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480426.5
CDS GCA 72 bp GAAAGTTCCCTGTTCTGGGCTGTGGTTTCTCCACGCTaGCCGAAGGGGGACAGAACCAAAGCCGGTGTGAGC +
Preference number: 6 (lower is better)
Translates to: ESSLFWAVVSPR*PKGDRTKAGVS
Trigger: GCTCACACCGGCTTTGGTTCTGTCCCCCTTCGGGCAGCGTGGAGAAACCACAGCCCAGAACAGGGAACTTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480426.5
CDS CCA 72 bp GCCTTGAAGATGGCTGTCCTGGAAAGTTCCCTGTTCTaGGCTGTGGTTTCTCCACGCTGCCCGAAGGGGGAC +
Preference number: 6 (lower is better)
Translates to: ALKMAVLESSLF*AVVSPRCPKGD
Trigger: GTCCCCCTTCGGGCAGCGTGGAGAAACCACAGCCCAGAACAGGGAACTTTCCAGGACAGCCATCTTCAAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480426.5
CDS CAA 72 bp AGCTCCTCAACAGAGATTGTCTGCCACATGCCATGGTaGATGACCGGGCCGCTGCTGGTGACACGGCCGACA +
Preference number: 6 (lower is better)
Translates to: SSSTEIVCHMPW*MTGPLLVTRPT
Trigger: TGTCGGCCGTGTCACCAGCAGCGGCCCGGTCATCAACCATGGCATGTGGCAGACAATCTCTGTTGAGGAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327773.7
ENST00000480426.5
ENST00000610073.1
CDS CAA 72 bp CTGGGCGGATGTGAGCCACGACTTCTACTTCCCAGGTaGATTCAGTCCCGACGTCCAGAGGGGTCCGCATGT +
Preference number: 6 (lower is better)
Translates to: LGGCEPRLLLPR*IQSRRPEGSAC
Trigger: ACATGCGGACCCCTCTGGACGTCGGGACTGAATCAACCTGGGAAGTAGAAGTCGTGGCTCACATCCGCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327773.7
ENST00000480426.5
ENST00000610073.1
CDS CAA 90 bp CTAAGTGGAGTCTGTGTCTGGCAGCCAAGAGAGAAATCCTGCCGTTaGCCGCAAGTGAAAACCTGCGGGCAGCCGAGGACTTGCCGGCTC +
Preference number: 6 (lower is better)
Translates to: LSGVCVWQPREKSCR*PQVKTCGQPRTCRL
Trigger: GAGCCGGCAAGTCCTCGGCTGCCCGCAGGTTTTCACTTGCGGCAAACGGCAGGATTTCTCTCTTGGCTGCCAGACACAGACTCCACTTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608763.1
CDS TCA 72 bp TGGGCGGATGTGAGCCACGACTTCTACTTCCCAGGTTaGTTCAGTCCCGACGTCCAGAGGGGTCCGCATGTA +
Preference number: 6 (lower is better)
Translates to: WADVSHDFYFPG*FSPDVQRGPHV
Trigger: TACATGCGGACCCCTCTGGACGTCGGGACTGAATCAACCTGGGAAGTAGAAGTCGTGGCTCACATCCGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327773.7
ENST00000480426.5
ENST00000610073.1
CDS TCA 72 bp GCAAACAGCACGCCTGTGTCTGCGGCTGGGCGGATGTaGGCCACGACTTCTACTTCCCAGGTTGATTCAGTC +
Preference number: 6 (lower is better)
Translates to: ANSTPVSAAGRM*ATTSTSQVDSV
Trigger: GACTGAATCAACCTGGGAAGTAGAAGTCGTGGCTCACATCCGCCCAGCCGCAGACACAGGCGTGCTGTTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327773.7
ENST00000480426.5
ENST00000610073.1
CDS TCA 72 bp AGCTGGACATCTCGCAGGGGTCCGACACCCTCTGCATaGGTACATGAGGCAGCGAGGCAAAGAACCTCAAGG +
Preference number: 6 (lower is better)
Translates to: SWTSRRGPTPSA*VHEAARQRTSR
Trigger: CCTTGAGGTTCTTTGCCTCGCTGCCTCATGTACTCATGCAGAGGGTGTCGGACCCCTGCGAGATGTCCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480426.5
CDS GCA 72 bp AGTGGAGTCTGTGTCTGGCAGCCAAGAGAGAAATCCTaGCGTTTGCCGCAAGTGAAAACCTGCGGGCAGCCG +
Preference number: 6 (lower is better)
Translates to: SGVCVWQPREKS*RLPQVKTCGQP
Trigger: CGGCTGCCCGCAGGTTTTCACTTGCGGCAAACGGCAGGATTTCTCTCTTGGCTGCCAGACACAGACTCCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608763.1
CDS CCA 72 bp TGGGCGTGCACTGGTCAGGCAGGTTTTGCACGCAGGTaGCGAAGCCTGAGTTTTTGGTGTACGGAGACCCAT +
Preference number: 6 (lower is better)
Translates to: WACTGQAGFARR*RSLSFWCTETH
Trigger: ATGGGTCTCCGTACACCAAAAACTCAGGCTTCGCCACCTGCGTGCAAAACCTGCCTGACCAGTGCACGCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS CCA 72 bp GCTTTACACAGGCAGAAGAAGTTGCCCATGAGGTCCTaGCAGGCTTGGGTCCCCTTCCTATCGCAGGGGTTG +
Preference number: 6 (lower is better)
Translates to: ALHRQKKLPMRS*QAWVPFLSQGL
Trigger: CAACCCCTGCGATAGGAAGGGGACCCAAGCCTGCCAGGACCTCATGGGCAACTTCTTCTGCCTGTGTAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS CCA 72 bp TTGTTGTGGCAGATCTGGAGGCAGCCCCCGTTCTCCTaGCTGCATTCGTTGACATCTTTGTCGCAGAGCCGG +
Preference number: 6 (lower is better)
Translates to: LLWQIWRQPPFS*LHSLTSLSQSR
Trigger: CCGGCTCTGCGACAAAGATGTCAACGAATGCAGCCAGGAGAACGGGGGCTGCCTCCAGATCTGCCACAACAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS CCA 72 bp AGATGGCTGTCCTGGAAAGTTCCCTGTTCTGGGCTGTaGTTTCTCCACGCTGCCCGAAGGGGGACAGAACCA +
Preference number: 6 (lower is better)
Translates to: RWLSWKVPCSGL*FLHAARRGTEP
Trigger: TGGTTCTGTCCCCCTTCGGGCAGCGTGGAGAAACCACAGCCCAGAACAGGGAACTTTCCAGGACAGCCATCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480426.5
CDS CCA 72 bp TCCCTTTCTTCTCTAACTTCTCGGTCCCCGTTCGTTTaGCCGCAGACCCGGCAGACAAGCAGGAGGCATCTG +
Preference number: 6 (lower is better)
Translates to: SLSSLTSRSPFV*PQTRQTSRRHL
Trigger: CAGATGCCTCCTGCTTGTCTGCCGGGTCTGCGGCCAAACGAACGGGGACCGAGAAGTTAGAGAAGAAAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608763.1
CDS CAA 72 bp TCCCCGGCCACCGCGATTTTCATGACAGCATCCCTGTaGACCTTGATGACCAGATTCCGCGCCAGCTCCTCA +
Preference number: 6 (lower is better)
Translates to: SPATAIFMTASL*TLMTRFRASSS
Trigger: TGAGGAGCTGGCGCGGAATCTGGTCATCAAGGTCAACAGGGATGCTGTCATGAAAATCGCGGTGGCCGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327773.7
ENST00000480426.5
ENST00000610073.1
CDS CAA 72 bp GTCTGTGTCTGGCAGCCAAGAGAGAAATCCTGCCGTTaGCCGCAAGTGAAAACCTGCGGGCAGCCGAGGACT +
Preference number: 6 (lower is better)
Translates to: VCVWQPREKSCR*PQVKTCGQPRT
Trigger: AGTCCTCGGCTGCCCGCAGGTTTTCACTTGCGGCAAACGGCAGGATTTCTCTCTTGGCTGCCAGACACAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608763.1
CDS TCA 72 bp TGCCGGCCCCCGTACGTGTTTCTCAGTCTCAGCCAATaGCCTGACCAGCACCGAGACACCATAATAGCCACT +
Preference number: 6 (lower is better)
Translates to: CRPPYVFLSLSQ*PDQHRDTIIAT
Trigger: AGTGGCTATTATGGTGTCTCGGTGCTGGTCAGGTCATTGGCTGAGACTGAGAAACACGTACGGGGGCCGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000608763.1
CDS CCA 72 bp AAGACAAGAGCCGCCCTGCCCAGAAACGTCCACATGTaGGTACTGCATTCCTACCGGTGTGACAGGTCAGTG +
Preference number: 6 (lower is better)
Translates to: KTRAALPRNVHM*VLHSYRCDRSV
Trigger: CACTGACCTGTCACACCGGTAGGAATGCAGTACCCACATGTGGACGTTTCTGGGCAGGGCGGCTCTTGTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480426.5
CDS CAA 72 bp CACGGTCAGGTTCAGATGATACAGTCCTCGCTCCGGTaGGAACAAGTCCCCGGCCACCGCGATTTTCATGAC +
Preference number: 6 (lower is better)
Translates to: HGQVQMIQSSLR*EQVPGHRDFHD
Trigger: GTCATGAAAATCGCGGTGGCCGGGGACTTGTTCCAACCGGAGCGAGGACTGTATCATCTGAACCTGACCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327773.7
ENST00000480426.5
ENST00000610073.1
CDS CAA 72 bp TTCCCTTTCTTCTCTAACTTCTCGGTCCCCGTTCGTTaGGCCGCAGACCCGGCAGACAAGCAGGAGGCATCT +
Preference number: 6 (lower is better)
Translates to: FPFFSNFSVPVR*AADPADKQEAS
Trigger: AGATGCCTCCTGCTTGTCTGCCGGGTCTGCGGCCAAACGAACGGGGACCGAGAAGTTAGAGAAGAAAGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608763.1
CDS CAA 90 bp AAGTCCCCGGCCACCGCGATTTTCATGACAGCATCCCTGTTGACCTaGATGACCAGATTCCGCGCCAGCTCCTCAACAGAGATTGTCTGC +
Preference number: 6 (lower is better)
Translates to: KSPATAIFMTASLLT*MTRFRASSSTEIVC
Trigger: GCAGACAATCTCTGTTGAGGAGCTGGCGCGGAATCTGGTCATCAAGGTCAACAGGGATGCTGTCATGAAAATCGCGGTGGCCGGGGACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327773.7
ENST00000480426.5
ENST00000610073.1
CDS CAA 90 bp AATACCTCCCACGGTCAGGTTCAGATGATACAGTCCTCGCTCCGGTaGGAACAAGTCCCCGGCCACCGCGATTTTCATGACAGCATCCCT +
Preference number: 6 (lower is better)
Translates to: NTSHGQVQMIQSSLR*EQVPGHRDFHDSIP
Trigger: AGGGATGCTGTCATGAAAATCGCGGTGGCCGGGGACTTGTTCCAACCGGAGCGAGGACTGTATCATCTGAACCTGACCGTGGGAGGTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327773.7
ENST00000480426.5
ENST00000610073.1
CDS TCA 72 bp TCATGGAAGGGAATACCTCCCACGGTCAGGTTCAGATaGTACAGTCCTCGCTCCGGTTGGAACAAGTCCCCG +
Preference number: 6 (lower is better)
Translates to: SWKGIPPTVRFR*YSPRSGWNKSP
Trigger: CGGGGACTTGTTCCAACCGGAGCGAGGACTGTATCATCTGAACCTGACCGTGGGAGGTATTCCCTTCCATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327773.7
ENST00000480426.5
ENST00000610073.1
CDS GCA 72 bp CGTGATCTTCTTCTGTGCCCAGTGAGTCATTCAGGCTaGAGGCCTCCTGGCTCGCTCTCATCCTCTTCAAAG +
Preference number: 6 (lower is better)
Translates to: RDLLLCPVSHSG*RPPGSLSSSSK
Trigger: CTTTGAAGAGGATGAGAGCGAGCCAGGAGGCCTGCAGCCTGAATGACTCACTGGGCACAGAAGAAGATCACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608763.1
CDS GCA 72 bp CAGACAGTCCCATCGGTTAAACGTGATCTTCTTCTGTaGCCAGTGAGTCATTCAGGCTGCAGGCCTCCTGGC +
Preference number: 6 (lower is better)
Translates to: QTVPSVKRDLLL*PVSHSGCRPPG
Trigger: GCCAGGAGGCCTGCAGCCTGAATGACTCACTGGGCACAGAAGAAGATCACGTTTAACCGATGGGACTGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608763.1
CDS CAA 72 bp GCCACCGCGATTTTCATGACAGCATCCCTGTTGACCTaGATGACCAGATTCCGCGCCAGCTCCTCAACAGAG +
Preference number: 6 (lower is better)
Translates to: ATAIFMTASLLT*MTRFRASSSTE
Trigger: CTCTGTTGAGGAGCTGGCGCGGAATCTGGTCATCAAGGTCAACAGGGATGCTGTCATGAAAATCGCGGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327773.7
ENST00000480426.5
ENST00000610073.1
CDS CAA 90 bp TGGAACAAGTCCCCGGCCACCGCGATTTTCATGACAGCATCCCTGTaGACCTTGATGACCAGATTCCGCGCCAGCTCCTCAACAGAGATT +
Preference number: 6 (lower is better)
Translates to: WNKSPATAIFMTASL*TLMTRFRASSSTEI
Trigger: AATCTCTGTTGAGGAGCTGGCGCGGAATCTGGTCATCAAGGTCAACAGGGATGCTGTCATGAAAATCGCGGTGGCCGGGGACTTGTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327773.7
ENST00000480426.5
ENST00000610073.1
CDS CCA 72 bp GCATCCTCGTGTTCACTTTCACCGTTTCCTGGATGGTaGTGTCTTCTCCGTTCAGCCAGTTCCAGCTCCTCA +
Preference number: 6 (lower is better)
Translates to: ASSCSLSPFPGW*CLLRSASSSSS
Trigger: TGAGGAGCTGGAACTGGCTGAACGGAGAAGACACCACCATCCAGGAAACGGTGAAAGTGAACACGAGGATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327773.7
ENST00000480426.5
ENST00000610073.1
CDS CCA 72 bp ACTGCATCCTCGTGTTCACTTTCACCGTTTCCTGGATaGTGGTGTCTTCTCCGTTCAGCCAGTTCCAGCTCC +
Preference number: 6 (lower is better)
Translates to: TASSCSLSPFPG*WCLLRSASSSS
Trigger: GGAGCTGGAACTGGCTGAACGGAGAAGACACCACCATCCAGGAAACGGTGAAAGTGAACACGAGGATGCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327773.7
ENST00000480426.5
ENST00000610073.1
CDS CAA 90 bp TTTATTCCAGATGCTGAGATTGGGTCTGGCCCTGGTAACGAGCATTaGCATGAACCAAGCCTGTCTGTCGTATCCCAGCAAGCGGGAGGG +
Preference number: 6 (lower is better)
Translates to: FIPDAEIGSGPGNEH*HEPSLSVVSQQAGG
Trigger: CCCTCCCGCTTGCTGGGATACGACAGACAGGCTTGGTTCATGCAAATGCTCGTTACCAGGGCCAGACCCAATCTCAGCATCTGGAATAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608763.1
CDS TCA 72 bp CTGGTCAGGCAGGTTTTGCACGCAGGTGGCGAAGCCTaGGTTTTTGGTGTACGGAGACCCATACTTGTTGAT +
Preference number: 6 (lower is better)
Translates to: LVRQVLHAGGEA*VFGVRRPILVD
Trigger: ATCAACAAGTATGGGTCTCCGTACACCAAAAACTCAGGCTTCGCCACCTGCGTGCAAAACCTGCCTGACCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS GCA 72 bp ATGCTGAGATTGGGTCTGGCCCTGGTAACGAGCATTTaGATGAACCAAGCCTGTCTGTCGTATCCCAGCAAG +
Preference number: 6 (lower is better)
Translates to: MLRLGLALVTSI*MNQACLSYPSK
Trigger: CTTGCTGGGATACGACAGACAGGCTTGGTTCATGCAAATGCTCGTTACCAGGGCCAGACCCAATCTCAGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608763.1
CDS CCA 72 bp AAGCACTGCATCCTCGTGTTCACTTTCACCGTTTCCTaGATGGTGGTGTCTTCTCCGTTCAGCCAGTTCCAG +
Preference number: 6 (lower is better)
Translates to: KHCILVFTFTVS*MVVSSPFSQFQ
Trigger: CTGGAACTGGCTGAACGGAGAAGACACCACCATCCAGGAAACGGTGAAAGTGAACACGAGGATGCAGTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327773.7
ENST00000480426.5
ENST00000610073.1
CDS CCA 72 bp TCTGTGCCCAGTGAGTCATTCAGGCTGCAGGCCTCCTaGCTCGCTCTCATCCTCTTCAAAGCTCTGTTTATT +
Preference number: 6 (lower is better)
Translates to: SVPSESFRLQAS*LALILFKALFI
Trigger: AATAAACAGAGCTTTGAAGAGGATGAGAGCGAGCCAGGAGGCCTGCAGCCTGAATGACTCACTGGGCACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608763.1
CDS CAA 72 bp GGCAGGTTTTGCACGCAGGTGGCGAAGCCTGAGTTTTaGGTGTACGGAGACCCATACTTGTTGATGCAGTCT +
Preference number: 6 (lower is better)
Translates to: GRFCTQVAKPEF*VYGDPYLLMQS
Trigger: AGACTGCATCAACAAGTATGGGTCTCCGTACACCAAAAACTCAGGCTTCGCCACCTGCGTGCAAAACCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS CAA 72 bp GATGCTGAGATTGGGTCTGGCCCTGGTAACGAGCATTaGCATGAACCAAGCCTGTCTGTCGTATCCCAGCAA +
Preference number: 6 (lower is better)
Translates to: DAEIGSGPGNEH*HEPSLSVVSQQ
Trigger: TTGCTGGGATACGACAGACAGGCTTGGTTCATGCAAATGCTCGTTACCAGGGCCAGACCCAATCTCAGCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608763.1
CDS CAA 90 bp CACTGGTCAGGCAGGTTTTGCACGCAGGTGGCGAAGCCTGAGTTTTaGGTGTACGGAGACCCATACTTGTTGATGCAGTCTAAGTATCTT +
Preference number: 6 (lower is better)
Translates to: HWSGRFCTQVAKPEF*VYGDPYLLMQSKYL
Trigger: AAGATACTTAGACTGCATCAACAAGTATGGGTCTCCGTACACCAAAAACTCAGGCTTCGCCACCTGCGTGCAAAACCTGCCTGACCAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327773.7
CDS CAA 72 bp CTACATAACAGCAGCTGTTTATTCCAGATGCTGAGATaGGGTCTGGCCCTGGTAACGAGCATTTGCATGAAC +
Preference number: 6 (lower is better)
Translates to: LHNSSCLFQMLR*GLALVTSICMN
Trigger: GTTCATGCAAATGCTCGTTACCAGGGCCAGACCCAATCTCAGCATCTGGAATAAACAGCTGCTGTTATGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608763.1
CDS TCA 72 bp GGAAATTGGAAAACTGAGTTTGTTGCTGAAATCATCTaGCTTAAACACCAGAGACTAATTCAGATTGCTGTG +
Preference number: 6 (lower is better)
Translates to: GNWKTEFVAEII*LKHQRLIQIAV
Trigger: CACAGCAATCTGAATTAGTCTCTGGTGTTTAAGTCAGATGATTTCAGCAACAAACTCAGTTTTCCAATTTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608763.1