RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GAS2L2 (Homo sapiens)

Ensembl gene IDs: ENSG00000270765

Ensembl transcript IDs: ENST00000604641.6, ENST00000618498.1

Found 326 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCTCCCCTCCCTTGCTGCCCAGCACAGCTCTCAACAGCCTGTCCTTaGGGGGCTGCCTGGCTGGACCCAGGAAGACATAGGCCAGTGGCC +
Preference number: 1 (lower is better)
Translates to: PPLPCCPAQLSTACP*GAAWLDPGRHRPVA
Trigger: GGCCACTGGCCTATGTCTTCCTGGGTCCAGCCAGGCAGCCCCCCAAGGACAGGCTGTTGAGAGCTGTGCTGGGCAGCAAGGGAGGGGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618498.1
3UTR CCA 90 bp TGGCTCCCTGAACTGGAAGAACGCACCCTTGGCCTCATCCCGGAGTaGCAGCCTGAGGCCCAGGCACTCGGCTGGGCCAAAGGAACGAGG +
Preference number: 1 (lower is better)
Translates to: WLPELEERTLGLIPE*QPEAQALGWAKGTR
Trigger: CCTCGTTCCTTTGGCCCAGCCGAGTGCCTGGGCCTCAGGCTGCCACTCCGGGATGAGGCCAAGGGTGCGTTCTTCCAGTTCAGGGAGCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618498.1
3UTR GCA 90 bp TCCAGCTGCTGGTCCTCCTGCCTCACTTCCACAGAGCAGTCCCCATaGGTGGACCCAGCCAGGTCCACAGTGACGGCCCTTAGTGGGATG +
Preference number: 1 (lower is better)
Translates to: SSCWSSCLTSTEQSP*VDPARSTVTALSGM
Trigger: CATCCCACTAAGGGCCGTCACTGTGGACCTGGCTGGGTCCACGCATGGGGACTGCTCTGTGGAAGTGAGGCAGGAGGACCAGCAGCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618498.1
3UTR CCA 90 bp CCCACTCTGTCTGGCTCCCAACTTCCCTTTGAGGCTTCCCGGTCCTaGGGTAACAGCTGGCTTAGGGGAGCCAGTCGGGGCTGCCTTCCA +
Preference number: 1 (lower is better)
Translates to: PTLSGSQLPFEASRS*GNSWLRGASRGCLP
Trigger: TGGAAGGCAGCCCCGACTGGCTCCCCTAAGCCAGCTGTTACCCCAGGACCGGGAAGCCTCAAAGGGAAGTTGGGAGCCAGACAGAGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618498.1
3UTR CCA 90 bp CCTTGGACAGGGGTTGGAGAACGGACAGACTCTGGCTCCCTGAACTaGAAGAACGCACCCTTGGCCTCATCCCGGAGTGGCAGCCTGAGG +
Preference number: 1 (lower is better)
Translates to: PWTGVGERTDSGSLN*KNAPLASSRSGSLR
Trigger: CCTCAGGCTGCCACTCCGGGATGAGGCCAAGGGTGCGTTCTTCCAGTTCAGGGAGCCAGAGTCTGTCCGTTCTCCAACCCCTGTCCAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618498.1
3UTR CCA 90 bp TCCTGTAGGCCCAGGTCCCAGGACTCTCTGGCCTCTGCCATGACCTaGATGTCCAGCTGCTGGTCCTCCTGCCTCACTTCCACAGAGCAG +
Preference number: 1 (lower is better)
Translates to: SCRPRSQDSLASAMT*MSSCWSSCLTSTEQ
Trigger: CTGCTCTGTGGAAGTGAGGCAGGAGGACCAGCAGCTGGACATCCAGGTCATGGCAGAGGCCAGAGAGTCCTGGGACCTGGGCCTACAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618498.1
3UTR CCA 90 bp GCTGGCAGACACAGTAGAAGCCGAGCAGTCCTGCCCTCCCTGAGGTaGGACCTTCCTCATGTGGGTGCCCTTGGCACTCAGGCTTGCCTT +
Preference number: 1 (lower is better)
Translates to: AGRHSRSRAVLPSLR*DLPHVGALGTQACL
Trigger: AAGGCAAGCCTGAGTGCCAAGGGCACCCACATGAGGAAGGTCCCACCTCAGGGAGGGCAGGACTGCTCGGCTTCTACTGTGTCTGCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618498.1
3UTR CCA 90 bp GGTCTCTCCGGGGCCGAATCCTGGGTCTCAGCTTCAGCTTGTAGATaGACGGGACCCTCTTGGGCTTCCGGAGAGTTCTCCTGCCCTTGC +
Preference number: 1 (lower is better)
Translates to: GLSGAESWVSASACR*TGPSWASGEFSCPC
Trigger: GCAAGGGCAGGAGAACTCTCCGGAAGCCCAAGAGGGTCCCGTCCATCTACAAGCTGAAGCTGAGACCCAGGATTCGGCCCCGGAGAGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618498.1
3UTR TCA 90 bp TTAGGCCTTGGACAGGGGTTGGAGAACGGACAGACTCTGGCTCCCTaGACTGGAAGAACGCACCCTTGGCCTCATCCCGGAGTGGCAGCC +
Preference number: 1 (lower is better)
Translates to: LGLGQGLENGQTLAP*TGRTHPWPHPGVAA
Trigger: GGCTGCCACTCCGGGATGAGGCCAAGGGTGCGTTCTTCCAGTTCAGGGAGCCAGAGTCTGTCCGTTCTCCAACCCCTGTCCAAGGCCTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618498.1
3UTR GCA 90 bp GTAGGCTGGGTCTGTGAGGGTCCATCCTGTACCCTTACTTCATGCTaGACTGGTGGGGCCGGGGGCTTCAGGAAGCTGCCTGGCTTGTGT +
Preference number: 1 (lower is better)
Translates to: VGWVCEGPSCTLTSC*TGGAGGFRKLPGLC
Trigger: ACACAAGCCAGGCAGCTTCCTGAAGCCCCCGGCCCCACCAGTGCAGCATGAAGTAAGGGTACAGGATGGACCCTCACAGACCCAGCCTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618498.1
3UTR CCA 90 bp GTGAAGGCTGCTTCTCAGGCCTGTGGTCTCTCCGGGGCCGAATCCTaGGTCTCAGCTTCAGCTTGTAGATGGACGGGACCCTCTTGGGCT +
Preference number: 1 (lower is better)
Translates to: VKAASQACGLSGAES*VSASACRWTGPSWA
Trigger: AGCCCAAGAGGGTCCCGTCCATCTACAAGCTGAAGCTGAGACCCAGGATTCGGCCCCGGAGAGACCACAGGCCTGAGAAGCAGCCTTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618498.1
3UTR GCA 90 bp ATTGTAGGCTGGGTCTGTGAGGGTCCATCCTGTACCCTTACTTCATaGTGCACTGGTGGGGCCGGGGGCTTCAGGAAGCTGCCTGGCTTG +
Preference number: 1 (lower is better)
Translates to: IVGWVCEGPSCTLTS*CTGGAGGFRKLPGL
Trigger: CAAGCCAGGCAGCTTCCTGAAGCCCCCGGCCCCACCAGTGCAGCATGAAGTAAGGGTACAGGATGGACCCTCACAGACCCAGCCTACAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618498.1
3UTR GCA 90 bp GACCCTCTTGGGCTTCCGGAGAGTTCTCCTGCCCTTGCTCAGACATaGCTTGGCTTTGTCAGAGTTGGGGTCCAAGGGCGAAGGTGTGGG +
Preference number: 1 (lower is better)
Translates to: DPLGLPESSPALAQT*LGFVRVGVQGRRCG
Trigger: CCCACACCTTCGCCCTTGGACCCCAACTCTGACAAAGCCAAGGCATGTCTGAGCAAGGGCAGGAGAACTCTCCGGAAGCCCAAGAGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618498.1
3UTR CCA 90 bp TCTTGGGCTTCCGGAGAGTTCTCCTGCCCTTGCTCAGACATGCCTTaGCTTTGTCAGAGTTGGGGTCCAAGGGCGAAGGTGTGGGGGCCT +
Preference number: 1 (lower is better)
Translates to: SWASGEFSCPCSDMP*LCQSWGPRAKVWGP
Trigger: AGGCCCCCACACCTTCGCCCTTGGACCCCAACTCTGACAAAGCCAAGGCATGTCTGAGCAAGGGCAGGAGAACTCTCCGGAAGCCCAAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618498.1
3UTR TCA 90 bp CTCGGCTGGGCCAAAGGAACGAGGCAGGGGAGATGGTCCTCTTGCTaGTATCCCTTTGGTGGTGGCCTCAATGGCTCGGAGTCTTTGTGG +
Preference number: 1 (lower is better)
Translates to: LGWAKGTRQGRWSSC*YPFGGGLNGSESLW
Trigger: CCACAAAGACTCCGAGCCATTGAGGCCACCACCAAAGGGATATCAGCAAGAGGACCATCTCCCCTGCCTCGTTCCTTTGGCCCAGCCGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618498.1
3UTR GCA 90 bp GCTTGTAGATGGACGGGACCCTCTTGGGCTTCCGGAGAGTTCTCCTaGCCTTGCTCAGACATGCCTTGGCTTTGTCAGAGTTGGGGTCCA +
Preference number: 1 (lower is better)
Translates to: ACRWTGPSWASGEFS*PCSDMPWLCQSWGP
Trigger: TGGACCCCAACTCTGACAAAGCCAAGGCATGTCTGAGCAAGGGCAGGAGAACTCTCCGGAAGCCCAAGAGGGTCCCGTCCATCTACAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618498.1
3UTR CCA 90 bp GAATCCTGGGTCTCAGCTTCAGCTTGTAGATGGACGGGACCCTCTTaGGCTTCCGGAGAGTTCTCCTGCCCTTGCTCAGACATGCCTTGG +
Preference number: 1 (lower is better)
Translates to: ESWVSASACRWTGPS*ASGEFSCPCSDMPW
Trigger: CCAAGGCATGTCTGAGCAAGGGCAGGAGAACTCTCCGGAAGCCCAAGAGGGTCCCGTCCATCTACAAGCTGAAGCTGAGACCCAGGATTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618498.1
3UTR CCA 90 bp ACACGCTCATGTGCCTCAGACCCAGGACTCCTCCTCAGGTGGAAGTaGAGCTTGATTAAGCCAGTGAGGTTGCAGGCCCTCTGGAGGTTG +
Preference number: 1 (lower is better)
Translates to: TRSCASDPGLLLRWK*SLIKPVRLQALWRL
Trigger: CAACCTCCAGAGGGCCTGCAACCTCACTGGCTTAATCAAGCTCCACTTCCACCTGAGGAGGAGTCCTGGGTCTGAGGCACATGAGCGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618498.1
3UTR CCA 90 bp TACCCAACACGCTCATGTGCCTCAGACCCAGGACTCCTCCTCAGGTaGAAGTGGAGCTTGATTAAGCCAGTGAGGTTGCAGGCCCTCTGG +
Preference number: 1 (lower is better)
Translates to: YPTRSCASDPGLLLR*KWSLIKPVRLQALW
Trigger: CCAGAGGGCCTGCAACCTCACTGGCTTAATCAAGCTCCACTTCCACCTGAGGAGGAGTCCTGGGTCTGAGGCACATGAGCGTGTTGGGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618498.1
3UTR CCA 90 bp ATGAGATACAGGATGGTCCTACTGCCCCTGGCCTACCTCTGGAGTTaGAGTGAGAGCAGTGGGTTGCCCCTTTGCTCAGATGAGCAGATG +
Preference number: 1 (lower is better)
Translates to: MRYRMVLLPLAYLWS*SESSGLPLCSDEQM
Trigger: CATCTGCTCATCTGAGCAAAGGGGCAACCCACTGCTCTCACTCCAACTCCAGAGGTAGGCCAGGGGCAGTAGGACCATCCTGTATCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604641.6
3UTR TCA 90 bp GCCCTGTGTGGAGGTGAGGGAACATCCCTTCTGTTCCCGCAGCTGTaGATCCAGTGTATACATGGCCATCCTTTTTGCTTCCCTCCTACC +
Preference number: 1 (lower is better)
Translates to: ALCGGEGTSLLFPQL*IQCIHGHPFCFPPT
Trigger: GGTAGGAGGGAAGCAAAAAGGATGGCCATGTATACACTGGATTCACAGCTGCGGGAACAGAAGGGATGTTCCCTCACCTCCACACAGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000604641.6
3UTR CCA 90 bp AGAGTAATGAGATACAGGATGGTCCTACTGCCCCTGGCCTACCTCTaGAGTTGGAGTGAGAGCAGTGGGTTGCCCCTTTGCTCAGATGAG +
Preference number: 1 (lower is better)
Translates to: RVMRYRMVLLPLAYL*SWSESSGLPLCSDE
Trigger: CTCATCTGAGCAAAGGGGCAACCCACTGCTCTCACTCCAACTCCAGAGGTAGGCCAGGGGCAGTAGGACCATCCTGTATCTCATTACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604641.6
3UTR CCA 90 bp GGGAACATCCCTTCTGTTCCCGCAGCTGTGAATCCAGTGTATACATaGCCATCCTTTTTGCTTCCCTCCTACCCAACACGCTCATGTGCC +
Preference number: 1 (lower is better)
Translates to: GNIPSVPAAVNPVYT*PSFLLPSYPTRSCA
Trigger: GGCACATGAGCGTGTTGGGTAGGAGGGAAGCAAAAAGGATGGCCATGTATACACTGGATTCACAGCTGCGGGAACAGAAGGGATGTTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000604641.6
3UTR GCA 90 bp TACTGCCCCTGGCCTACCTCTGGAGTTGGAGTGAGAGCAGTGGGTTaGCCCTTTGCTCAGATGAGCAGATGGAGTCTATATTTGTCTTCT +
Preference number: 1 (lower is better)
Translates to: YCPWPTSGVGVRAVG*PFAQMSRWSLYLSS
Trigger: AGAAGACAAATATAGACTCCATCTGCTCATCTGAGCAAAGGGGCAACCCACTGCTCTCACTCCAACTCCAGAGGTAGGCCAGGGGCAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604641.6
3UTR-3UTR GCA 90 bp CGTGAAGGCTGCTTCTCAGGCCTGTGGTCTCTCCGGGGCCGAATCCTGGGTCTCCCAGGCTCAGGCCACTaGCCAGCCAGCCTGGGGATG +
Preference number: 2 (lower is better)
Translates to: REGCFSGLWSLRGRILGLPGSGH*PASLGM
Trigger: CATCCCCAGGCTGGCTGGGCAGTGGCCTGAGCCTGG...GAGACCCAGGATTCGGCCCCGGAGAGACCACAGGCCTGAGAAGCAGCCTTCACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618498.1
3UTR-3UTR CCA 90 bp CGTGAAGGCTGCTTCTCAGGCCTGTGGTCTCTCCGGGGCCGAATCCTGGGTCTCGGCCTCATCCCGGAGTaGCAGCCTGAGGCCCAGGCA +
Preference number: 2 (lower is better)
Translates to: REGCFSGLWSLRGRILGLGLIPE*QPEAQA
Trigger: TGCCTGGGCCTCAGGCTGCCACTCCGGGATGAGGCC...GAGACCCAGGATTCGGCCCCGGAGAGACCACAGGCCTGAGAAGCAGCCTTCACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618498.1
3UTR-3UTR TCA 90 bp TTGTTCCCGCCCAAGGGCAGAGGTGTGTACCGCCCCTCCTGCTCCTGTAGGCCCCAGCCAGGTCCACAGTaGCGGCCCTTAGTGGGATGG +
Preference number: 2 (lower is better)
Translates to: LFPPKGRGVYRPSCSCRPQPGPQ*RPLVGW
Trigger: CCATCCCACTAAGGGCCGTCACTGTGGACCTGGCTG...GGGCCTACAGGAGCAGGAGGGGCGGTACACACCTCTGCCCTTGGGCGGGAACAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618498.1
3UTR-3UTR CCA 90 bp TTGTTCCCGCCCAAGGGCAGAGGTGTGTACCGCCCCTCCTGCTCCTGTAGGCCCGGAGTCTTTGTGGGGTaGGGTTCCCGGCGTCGGTTC +
Preference number: 2 (lower is better)
Translates to: LFPPKGRGVYRPSCSCRPGVFVG*GSRRRF
Trigger: GAACCGACGCCGGGAACCCCACCCCACAAAGACTCC...GGGCCTACAGGAGCAGGAGGGGCGGTACACACCTCTGCCCTTGGGCGGGAACAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618498.1
3UTR-3UTR CCA 90 bp CGTGAAGGCTGCTTCTCAGGCCTGTGGTCTCTCCGGGGCCGAATCCTGGGTCTCGGCTCGGAGTCTTTGTaGGGTGGGGTTCCCGGCGTC +
Preference number: 2 (lower is better)
Translates to: REGCFSGLWSLRGRILGLGSESL*GGVPGV
Trigger: GACGCCGGGAACCCCACCCCACAAAGACTCCGAGCC...GAGACCCAGGATTCGGCCCCGGAGAGACCACAGGCCTGAGAAGCAGCCTTCACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618498.1
3UTR-3UTR CCA 90 bp CCTGGGCCCACTCTGTCTGGCTCCCAACTTCCCTTTGAGGCTTCCCGGTCCTGGGCCCAGGCACTCGGCTaGGCCAAAGGAACGAGGCAG +
Preference number: 2 (lower is better)
Translates to: PGPTLSGSQLPFEASRSWAQALG*AKGTRQ
Trigger: CTGCCTCGTTCCTTTGGCCCAGCCGAGTGCCTGGGC...CCAGGACCGGGAAGCCTCAAAGGGAAGTTGGGAGCCAGACAGAGTGGGCCCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618498.1
3UTR CAA 90 bp GGAGAACGGACAGACTCTGGCTCCCTGAACTGGAAGAACGCACCCTaGGCCTCATCCCGGAGTGGCAGCCTGAGGCCCAGGCACTCGGCT +
Preference number: 2 (lower is better)
Translates to: GERTDSGSLNWKNAP*ASSRSGSLRPRHSA
Trigger: AGCCGAGTGCCTGGGCCTCAGGCTGCCACTCCGGGATGAGGCCAAGGGTGCGTTCTTCCAGTTCAGGGAGCCAGAGTCTGTCCGTTCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618498.1
3UTR-3UTR GCA 90 bp GCTGCCTGGCTGGACCCAGGAAGACATAGGCCAGTGGCCTGGGGATTCGTGAAGGGAGCCAGTCGGGGCTaGCTTCCAGGCTTCCAGGTC +
Preference number: 2 (lower is better)
Translates to: AAWLDPGRHRPVAWGFVKGASRG*LPGFQV
Trigger: GACCTGGAAGCCTGGAAGGCAGCCCCGACTGGCTCC...CTTCACGAATCCCCAGGCCACTGGCCTATGTCTTCCTGGGTCCAGCCAGGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618498.1
3UTR-3UTR CCA 90 bp TTGTTCCCGCCCAAGGGCAGAGGTGTGTACCGCCCCTCCTGCTCCTGTAGGCCCCAGGGGGCAGCCGGATaGGGATCTTGGTTAGGCCTT +
Preference number: 2 (lower is better)
Translates to: LFPPKGRGVYRPSCSCRPQGAAG*GSWLGL
Trigger: AAGGCCTAACCAAGATCCCCATCCGGCTGCCCCCTG...GGGCCTACAGGAGCAGGAGGGGCGGTACACACCTCTGCCCTTGGGCGGGAACAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000618498.1
3UTR-3UTR TCA 90 bp CCTGGGCCCACTCTGTCTGGCTCCCAACTTCCCTTTGAGGCTTCCCGGTCCTGGGGGTGGTGGGCTCTGTaGGCGGCTGATGGTCATTGT +
Preference number: 2 (lower is better)
Translates to: PGPTLSGSQLPFEASRSWGWWAL*AADGHC
Trigger: ACAATGACCATCAGCCGCTCACAGAGCCCACCACCC...CCAGGACCGGGAAGCCTCAAAGGGAAGTTGGGAGCCAGACAGAGTGGGCCCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618498.1
3UTR-3UTR GCA 90 bp TTGTTCCCGCCCAAGGGCAGAGGTGTGTACCGCCCCTCCTGCTCCTGTAGGCCCTGTACCCTTACTTCATaGTGCACTGGTGGGGCCGGG +
Preference number: 2 (lower is better)
Translates to: LFPPKGRGVYRPSCSCRPCTLTS*CTGGAG
Trigger: CCCGGCCCCACCAGTGCAGCATGAAGTAAGGGTACA...GGGCCTACAGGAGCAGGAGGGGCGGTACACACCTCTGCCCTTGGGCGGGAACAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618498.1
3UTR-3UTR GCA 90 bp CCCACTCTGTCTGGCTCCCAACTTCCCTTTGAGGCTTCCCGGTCCTGGGGTAACGTGTACCGCCCCTCCTaGTCCTGTAGGCCCAGGTCC +
Preference number: 2 (lower is better)
Translates to: PTLSGSQLPFEASRSWGNVYRPS*SCRPRS
Trigger: GGACCTGGGCCTACAGGAGCAGGAGGGGCGGTACAC...GTTACCCCAGGACCGGGAAGCCTCAAAGGGAAGTTGGGAGCCAGACAGAGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618498.1
3UTR-3UTR CCA 90 bp CGTGAAGGCTGCTTCTCAGGCCTGTGGTCTCTCCGGGGCCGAATCCTGGGTCTCTTCATGCTGCACTGGTaGGGCCGGGGGCTTCAGGAA +
Preference number: 2 (lower is better)
Translates to: REGCFSGLWSLRGRILGLFMLHW*GRGLQE
Trigger: TTCCTGAAGCCCCCGGCCCCACCAGTGCAGCATGAA...GAGACCCAGGATTCGGCCCCGGAGAGACCACAGGCCTGAGAAGCAGCCTTCACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618498.1
3UTR-3UTR CCA 90 bp TTGTTCCCGCCCAAGGGCAGAGGTGTGTACCGCCCCTCCTGCTCCTGTAGGCCCCTGGCACCTCAGGAATaGTGCCATCTCTCTGGAGGC +
Preference number: 2 (lower is better)
Translates to: LFPPKGRGVYRPSCSCRPLAPQE*CHLSGG
Trigger: GCCTCCAGAGAGATGGCACCATTCCTGAGGTGCCAG...GGGCCTACAGGAGCAGGAGGGGCGGTACACACCTCTGCCCTTGGGCGGGAACAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618498.1
3UTR-3UTR CCA 90 bp CGTGAAGGCTGCTTCTCAGGCCTGTGGTCTCTCCGGGGCCGAATCCTGGGTCTCCTGCCCTCCCTGAGGTaGGACCTTCCTCATGTGGGT +
Preference number: 2 (lower is better)
Translates to: REGCFSGLWSLRGRILGLLPSLR*DLPHVG
Trigger: ACCCACATGAGGAAGGTCCCACCTCAGGGAGGGCAG...GAGACCCAGGATTCGGCCCCGGAGAGACCACAGGCCTGAGAAGCAGCCTTCACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618498.1
3UTR-3UTR GCA 90 bp CCCACTCTGTCTGGCTCCCAACTTCCCTTTGAGGCTTCCCGGTCCTGGGGTAACACAGAGCAGTCCCCATaGGTGGACCCAGCCAGGTCC +
Preference number: 2 (lower is better)
Translates to: PTLSGSQLPFEASRSWGNTEQSP*VDPARS
Trigger: GGACCTGGCTGGGTCCACGCATGGGGACTGCTCTGT...GTTACCCCAGGACCGGGAAGCCTCAAAGGGAAGTTGGGAGCCAGACAGAGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618498.1
3UTR-3UTR CCA 90 bp CGTGAAGGCTGCTTCTCAGGCCTGTGGTCTCTCCGGGGCCGAATCCTGGGTCTCGCCTTGGACAGGGGTTaGAGAACGGACAGACTCTGG +
Preference number: 2 (lower is better)
Translates to: REGCFSGLWSLRGRILGLALDRG*RTDRLW
Trigger: CCAGAGTCTGTCCGTTCTCCAACCCCTGTCCAAGGC...GAGACCCAGGATTCGGCCCCGGAGAGACCACAGGCCTGAGAAGCAGCCTTCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618498.1
3UTR-3UTR CCA 90 bp GCTGCCTGGCTGGACCCAGGAAGACATAGGCCAGTGGCCTGGGGATTCGTGAAGGAGGCTTCCCGGTCCTaGGGTAACAGCTGGCTTAGG +
Preference number: 2 (lower is better)
Translates to: AAWLDPGRHRPVAWGFVKEASRS*GNSWLR
Trigger: CCTAAGCCAGCTGTTACCCCAGGACCGGGAAGCCTC...CTTCACGAATCCCCAGGCCACTGGCCTATGTCTTCCTGGGTCCAGCCAGGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618498.1
3UTR-3UTR CCA 90 bp GCTGCCTGGCTGGACCCAGGAAGACATAGGCCAGTGGCCTGGGGATTCGTGAAGGGCTTGCCTTTGTCCTaGGCCCACTCTGTCTGGCTC +
Preference number: 2 (lower is better)
Translates to: AAWLDPGRHRPVAWGFVKGLPLS*AHSVWL
Trigger: GAGCCAGACAGAGTGGGCCCAGGACAAAGGCAAGCC...CTTCACGAATCCCCAGGCCACTGGCCTATGTCTTCCTGGGTCCAGCCAGGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618498.1
3UTR CAA 90 bp CTCTTGGGCTTCCGGAGAGTTCTCCTGCCCTTGCTCAGACATGCCTaGGCTTTGTCAGAGTTGGGGTCCAAGGGCGAAGGTGTGGGGGCC +
Preference number: 2 (lower is better)
Translates to: LLGFRRVLLPLLRHA*ALSELGSKGEGVGA
Trigger: GGCCCCCACACCTTCGCCCTTGGACCCCAACTCTGACAAAGCCAAGGCATGTCTGAGCAAGGGCAGGAGAACTCTCCGGAAGCCCAAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618498.1
3UTR CAA 90 bp GGACTCCTCCTCAGGTGGAAGTGGAGCTTGATTAAGCCAGTGAGGTaGCAGGCCCTCTGGAGGTTGGGGGCTGCTCTCCAATGGAGCGGC +
Preference number: 2 (lower is better)
Translates to: GLLLRWKWSLIKPVR*QALWRLGAALQWSG
Trigger: GCCGCTCCATTGGAGAGCAGCCCCCAACCTCCAGAGGGCCTGCAACCTCACTGGCTTAATCAAGCTCCACTTCCACCTGAGGAGGAGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618498.1
3UTR-3UTR TCA 90 bp CCTGACGAGGTACACTGTGGGTCTCGGCCTTTTTGGGTAGATGAGGACTGGGGGGCTGCCTGGCTTGTGTaGGAGGGATGTGCAGCGGCA +
Preference number: 2 (lower is better)
Translates to: PDEVHCGSRPFWVDEDWGAAWLV*EGCAAA
Trigger: TGCCGCTGCACATCCCTCTCACACAAGCCAGGCAGC...CCCCCAGTCCTCATCTACCCAAAAAGGCCGAGACCCACAGTGTACCTCGTCAGG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000618498.1
3UTR-3UTR TCA 90 bp TTGTTCCCGCCCAAGGGCAGAGGTGTGTACCGCCCCTCCTGCTCCTGTAGGCCCAGATGGTCCTCTTGCTaGTATCCCTTTGGTGGTGGC +
Preference number: 2 (lower is better)
Translates to: LFPPKGRGVYRPSCSCRPRWSSC*YPFGGG
Trigger: GCCACCACCAAAGGGATATCAGCAAGAGGACCATCT...GGGCCTACAGGAGCAGGAGGGGCGGTACACACCTCTGCCCTTGGGCGGGAACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618498.1
3UTR-3UTR GCA 90 bp CCCACTCTGTCTGGCTCCCAACTTCCCTTTGAGGCTTCCCGGTCCTGGGGTAACCCAGACCTTGTGCCCTaGGGACAGGCACTCCTGACT +
Preference number: 2 (lower is better)
Translates to: PTLSGSQLPFEASRSWGNPDLVP*GQALLT
Trigger: AGTCAGGAGTGCCTGTCCGCAGGGCACAAGGTCTGG...GTTACCCCAGGACCGGGAAGCCTCAAAGGGAAGTTGGGAGCCAGACAGAGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618498.1
3UTR-3UTR CCA 90 bp ACAGGGGTTGGAGAACGGACAGACTCTGGCTCCCTGAACTGGAAGAACGCACCCATGGTGCCATCTCTCTaGAGGCCCCCGTCCCTGCTC +
Preference number: 2 (lower is better)
Translates to: TGVGERTDSGSLNWKNAPMVPSL*RPPSLL
Trigger: GAGCAGGGACGGGGGCCTCCAGAGAGATGGCACCAT...GGGTGCGTTCTTCCAGTTCAGGGAGCCAGAGTCTGTCCGTTCTCCAACCCCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618498.1
3UTR-3UTR CCA 90 bp CGTGAAGGCTGCTTCTCAGGCCTGTGGTCTCTCCGGGGCCGAATCCTGGGTCTCATGAGAGACCTCTCCTaGCACCTCAGGAATGGTGCC +
Preference number: 2 (lower is better)
Translates to: REGCFSGLWSLRGRILGLMRDLS*HLRNGA
Trigger: GGCACCATTCCTGAGGTGCCAGGAGAGGTCTCTCAT...GAGACCCAGGATTCGGCCCCGGAGAGACCACAGGCCTGAGAAGCAGCCTTCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618498.1
3UTR-3UTR CCA 90 bp ACAGGGGTTGGAGAACGGACAGACTCTGGCTCCCTGAACTGGAAGAACGCACCCTGGGTAGATGAGGACTaGGGGCTGGGTGGGCTGTCC +
Preference number: 2 (lower is better)
Translates to: TGVGERTDSGSLNWKNAPWVDED*GLGGLS
Trigger: GGACAGCCCACCCAGCCCCCAGTCCTCATCTACCCA...GGGTGCGTTCTTCCAGTTCAGGGAGCCAGAGTCTGTCCGTTCTCCAACCCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618498.1
3UTR-3UTR TCA 90 bp CCTGACGAGGTACACTGTGGGTCTCGGCCTTTTTGGGTAGATGAGGACTGGGGGGCCTCCAAGATGGGATaGGAGACCTCTCCTGGCACC +
Preference number: 2 (lower is better)
Translates to: PDEVHCGSRPFWVDEDWGASKMG*ETSPGT
Trigger: GGTGCCAGGAGAGGTCTCTCATCCCATCTTGGAGGC...CCCCCAGTCCTCATCTACCCAAAAAGGCCGAGACCCACAGTGTACCTCGTCAGG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000618498.1
3UTR-3UTR TCA 90 bp CCAGCCAGGTCCACAGTGACGGCCCTTAGTGGGATGGGGTCTCTCCCAAGTTCTCTCCTCCCTCTTTCCTaGCGAGGTACACTGTGGGTC +
Preference number: 2 (lower is better)
Translates to: PARSTVTALSGMGSLPSSLLPLS*RGTLWV
Trigger: GACCCACAGTGTACCTCGTCAGGAAAGAGGGAGGAG...AGAACTTGGGAGAGACCCCATCCCACTAAGGGCCGTCACTGTGGACCTGGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618498.1
3UTR-3UTR CCA 90 bp ACAGGGGTTGGAGAACGGACAGACTCTGGCTCCCTGAACTGGAAGAACGCACCCTACTTCATGCTGCACTaGTGGGGCCGGGGGCTTCAG +
Preference number: 2 (lower is better)
Translates to: TGVGERTDSGSLNWKNAPYFMLH*WGRGLQ
Trigger: CTGAAGCCCCCGGCCCCACCAGTGCAGCATGAAGTA...GGGTGCGTTCTTCCAGTTCAGGGAGCCAGAGTCTGTCCGTTCTCCAACCCCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000618498.1
3UTR-3UTR CCA 90 bp CCTGGGCCCACTCTGTCTGGCTCCCAACTTCCCTTTGAGGCTTCCCGGTCCTGGCATGAACCCAAGATGTaGGAATCCTTCCCCTGGGGA +
Preference number: 2 (lower is better)
Translates to: PGPTLSGSQLPFEASRSWHEPKM*ESFPWG
Trigger: TCCCCAGGGGAAGGATTCCCACATCTTGGGTTCATG...CCAGGACCGGGAAGCCTCAAAGGGAAGTTGGGAGCCAGACAGAGTGGGCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618498.1
3UTR-3UTR CCA 90 bp CCTGGGCCCACTCTGTCTGGCTCCCAACTTCCCTTTGAGGCTTCCCGGTCCTGGCTGATATCCCTTTGGTaGTGGCCTCAATGGCTCGGA +
Preference number: 2 (lower is better)
Translates to: PGPTLSGSQLPFEASRSWLISLW*WPQWLG
Trigger: TCCGAGCCATTGAGGCCACCACCAAAGGGATATCAG...CCAGGACCGGGAAGCCTCAAAGGGAAGTTGGGAGCCAGACAGAGTGGGCCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618498.1
3UTR CAA 90 bp GGCACTCGGCTGGGCCAAAGGAACGAGGCAGGGGAGATGGTCCTCTaGCTGATATCCCTTTGGTGGTGGCCTCAATGGCTCGGAGTCTTT +
Preference number: 2 (lower is better)
Translates to: GTRLGQRNEAGEMVL*LISLWWWPQWLGVF
Trigger: AAAGACTCCGAGCCATTGAGGCCACCACCAAAGGGATATCAGCAAGAGGACCATCTCCCCTGCCTCGTTCCTTTGGCCCAGCCGAGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618498.1
3UTR CAA 90 bp TCATGTGCCTCAGACCCAGGACTCCTCCTCAGGTGGAAGTGGAGCTaGATTAAGCCAGTGAGGTTGCAGGCCCTCTGGAGGTTGGGGGCT +
Preference number: 2 (lower is better)
Translates to: SCASDPGLLLRWKWS*IKPVRLQALWRLGA
Trigger: AGCCCCCAACCTCCAGAGGGCCTGCAACCTCACTGGCTTAATCAAGCTCCACTTCCACCTGAGGAGGAGTCCTGGGTCTGAGGCACATGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618498.1
3UTR-3UTR TCA 90 bp ACAGGGGTTGGAGAACGGACAGACTCTGGCTCCCTGAACTGGAAGAACGCACCCTGTAGGCTGGGTCTGTaGGGGTCCATCCTGTACCCT +
Preference number: 2 (lower is better)
Translates to: TGVGERTDSGSLNWKNAPCRLGL*GSILYP
Trigger: AGGGTACAGGATGGACCCTCACAGACCCAGCCTACA...GGGTGCGTTCTTCCAGTTCAGGGAGCCAGAGTCTGTCCGTTCTCCAACCCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618498.1
3UTR-3UTR TCA 90 bp CCCACTCTGTCTGGCTCCCAACTTCCCTTTGAGGCTTCCCGGTCCTGGGGTAACGCGGACAGGCACTCCTaGCTTCTAGCAGCTTCATGT +
Preference number: 2 (lower is better)
Translates to: PTLSGSQLPFEASRSWGNADRHS*LLAASC
Trigger: ACATGAAGCTGCTAGAAGTCAGGAGTGCCTGTCCGC...GTTACCCCAGGACCGGGAAGCCTCAAAGGGAAGTTGGGAGCCAGACAGAGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618498.1
3UTR-3UTR TCA 90 bp CAGCTTCAGCTTGTAGATGGACGGGACCCTCTTGGGCTTCCGGAGAGTTCTCCTAGGGATGGGGACCCCTaGGCCAGTTCTTGGATGGCT +
Preference number: 2 (lower is better)
Translates to: QLQLVDGRDPLGLPESSPRDGDP*ASSWMA
Trigger: AGCCATCCAAGAACTGGCTCAGGGGTCCCCATCCCT...AGGAGAACTCTCCGGAAGCCCAAGAGGGTCCCGTCCATCTACAAGCTGAAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618498.1
3UTR-3UTR GCA 90 bp CCAGCCAGGTCCACAGTGACGGCCCTTAGTGGGATGGGGTCTCTCCCAAGTTCTTGTGTGAGAGGGATGTaGAGCGGCAGGGGTCATGTT +
Preference number: 2 (lower is better)
Translates to: PARSTVTALSGMGSLPSSCVRGM*SGRGHV
Trigger: AACATGACCCCTGCCGCTGCACATCCCTCTCACACA...AGAACTTGGGAGAGACCCCATCCCACTAAGGGCCGTCACTGTGGACCTGGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618498.1
3UTR-3UTR CCA 90 bp CCCACTCTGTCTGGCTCCCAACTTCCCTTTGAGGCTTCCCGGTCCTGGGGTAACACACGTACCATCACATaGTTCCGGAGGATCCGGATG +
Preference number: 2 (lower is better)
Translates to: PTLSGSQLPFEASRSWGNTRTIT*FRRIRM
Trigger: CATCCGGATCCTCCGGAACCATGTGATGGTACGTGT...GTTACCCCAGGACCGGGAAGCCTCAAAGGGAAGTTGGGAGCCAGACAGAGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618498.1
3UTR-3UTR TCA 90 bp CCAGCCAGGTCCACAGTGACGGCCCTTAGTGGGATGGGGTCTCTCCCAAGTTCTCCTCAGCCTTCGGTCTaGAGAGGTATATGTCTTCCA +
Preference number: 2 (lower is better)
Translates to: PARSTVTALSGMGSLPSSPQPSV*RGICLP
Trigger: TGGAAGACATATACCTCTTCAGACCGAAGGCTGAGG...AGAACTTGGGAGAGACCCCATCCCACTAAGGGCCGTCACTGTGGACCTGGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618498.1
3UTR-3UTR GCA 90 bp TCTCCCAAGTTCTGTCCTGGGACTTCCACTTGTAGCACCAGGAAAGCTCCTTCCGCACCTCAGGAATGGTaGCATCTCTCTGGAGGCCCC +
Preference number: 2 (lower is better)
Translates to: SPKFCPGTSTCSTRKAPSAPQEW*HLSGGP
Trigger: GGGGCCTCCAGAGAGATGGCACCATTCCTGAGGTGC...GGAAGGAGCTTTCCTGGTGCTACAAGTGGAAGTCCCAGGACAGAACTTGGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618498.1
3UTR-3UTR CCA 90 bp CCAGCCAGGTCCACAGTGACGGCCCTTAGTGGGATGGGGTCTCTCCCAAGTTCTTTGCTGATATCCCTTTaGTGGTGGCCTCAATGGCTC +
Preference number: 2 (lower is better)
Translates to: PARSTVTALSGMGSLPSSLLISL*WWPQWL
Trigger: GAGCCATTGAGGCCACCACCAAAGGGATATCAGCAA...AGAACTTGGGAGAGACCCCATCCCACTAAGGGCCGTCACTGTGGACCTGGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618498.1
3UTR-3UTR CCA 90 bp TCTCCCAAGTTCTGTCCTGGGACTTCCACTTGTAGCACCAGGAAAGCTCCTTCCGGAAGAACGCACCCTTaGCCTCATCCCGGAGTGGCA +
Preference number: 2 (lower is better)
Translates to: SPKFCPGTSTCSTRKAPSGRTHP*PHPGVA
Trigger: TGCCACTCCGGGATGAGGCCAAGGGTGCGTTCTTCC...GGAAGGAGCTTTCCTGGTGCTACAAGTGGAAGTCCCAGGACAGAACTTGGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618498.1
3UTR-3UTR CCA 90 bp CCCACTCTGTCTGGCTCCCAACTTCCCTTTGAGGCTTCCCGGTCCTGGGGTAACAGAACGGACAGACTCTaGCTCCCTGAACTGGAAGAA +
Preference number: 2 (lower is better)
Translates to: PTLSGSQLPFEASRSWGNRTDRL*LPELEE
Trigger: TTCTTCCAGTTCAGGGAGCCAGAGTCTGTCCGTTCT...GTTACCCCAGGACCGGGAAGCCTCAAAGGGAAGTTGGGAGCCAGACAGAGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618498.1
3UTR-3UTR CCA 90 bp TCTCCCAAGTTCTGTCCTGGGACTTCCACTTGTAGCACCAGGAAAGCTCCTTCCGCCGGATGGGGATCTTaGTTAGGCCTTGGACAGGGG +
Preference number: 2 (lower is better)
Translates to: SPKFCPGTSTCSTRKAPSAGWGS*LGLGQG
Trigger: CCCCTGTCCAAGGCCTAACCAAGATCCCCATCCGGC...GGAAGGAGCTTTCCTGGTGCTACAAGTGGAAGTCCCAGGACAGAACTTGGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618498.1
3UTR CAA 90 bp GCAGTGGGTTGCCCCTTTGCTCAGATGAGCAGATGGAGTCTATATTaGTCTTCTGACCCACTCCTGCCCAAGGCCCTGTGTGGAGGTGAG +
Preference number: 2 (lower is better)
Translates to: AVGCPFAQMSRWSLY*SSDPLLPKALCGGE
Trigger: CTCACCTCCACACAGGGCCTTGGGCAGGAGTGGGTCAGAAGACAAATATAGACTCCATCTGCTCATCTGAGCAAAGGGGCAACCCACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604641.6
3UTR CAA 90 bp CTTCATGTTGCCCAAAATCTCCTCTTCAAGGCTACAGTAGATGGCTaGCTCCTTGTTCCCGCCCAAGGGCAGAGGTGTGTACCGCCCCTC +
Preference number: 2 (lower is better)
Translates to: LHVAQNLLFKATVDG*LLVPAQGQRCVPPL
Trigger: GAGGGGCGGTACACACCTCTGCCCTTGGGCGGGAACAAGGAGCAAGCCATCTACTGTAGCCTTGAAGAGGAGATTTTGGGCAACATGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618498.1
3UTR-3UTR TCA 90 bp GGGGAGAGTAATGAGATACAGGATGGTCCTACTGCCCCTGGCCTACCTCTGGAGCTGTTCCCGCAGCTGTaGATCCAGTGTATACATGGC +
Preference number: 2 (lower is better)
Translates to: GESNEIQDGPTAPGLPLELFPQL*IQCIHG
Trigger: GCCATGTATACACTGGATTCACAGCTGCGGGAACAG...CTCCAGAGGTAGGCCAGGGGCAGTAGGACCATCCTGTATCTCATTACTCTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604641.6
3UTR-3UTR TCA 90 bp GAGAGTAATGAGATACAGGATGGTCCTACTGCCCCTGGCCTACCTCTGGAGTTGGGCCCTGTGTGGAGGTaGGGGAACATCCCTTCTGTT +
Preference number: 2 (lower is better)
Translates to: ESNEIQDGPTAPGLPLELGPVWR*GNIPSV
Trigger: AACAGAAGGGATGTTCCCTCACCTCCACACAGGGCC...CAACTCCAGAGGTAGGCCAGGGGCAGTAGGACCATCCTGTATCTCATTACTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604641.6
3UTR-3UTR CCA 90 bp AAATCTCCTCTTCAAGGCTACAGTAGATGGCTTGCTCCTTGTTCCCGCCCAAGGGCCTCTGCCATGACCTaGATGTCCAGCTGCTGGTCC +
Preference number: 2 (lower is better)
Translates to: KSPLQGYSRWLAPCSRPRASAMT*MSSCWS
Trigger: GGACCAGCAGCTGGACATCCAGGTCATGGCAGAGGC...CCTTGGGCGGGAACAAGGAGCAAGCCATCTACTGTAGCCTTGAAGAGGAGATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618498.1
3UTR-3UTR CCA 90 bp AAATCTCCTCTTCAAGGCTACAGTAGATGGCTTGCTCCTTGTTCCCGCCCAAGGTGGTGGTGGCCTCAATaGCTCGGAGTCTTTGTGGGG +
Preference number: 2 (lower is better)
Translates to: KSPLQGYSRWLAPCSRPRWWWPQ*LGVFVG
Trigger: CCCCACAAAGACTCCGAGCCATTGAGGCCACCACCA...CCTTGGGCGGGAACAAGGAGCAAGCCATCTACTGTAGCCTTGAAGAGGAGATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618498.1
3UTR-3UTR CCA 90 bp AAATCTCCTCTTCAAGGCTACAGTAGATGGCTTGCTCCTTGTTCCCGCCCAAGGTCTGGCTCCCTGAACTaGAAGAACGCACCCTTGGCC +
Preference number: 2 (lower is better)
Translates to: KSPLQGYSRWLAPCSRPRSGSLN*KNAPLA
Trigger: GGCCAAGGGTGCGTTCTTCCAGTTCAGGGAGCCAGA...CCTTGGGCGGGAACAAGGAGCAAGCCATCTACTGTAGCCTTGAAGAGGAGATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618498.1
3UTR-3UTR CCA 90 bp CCTACCTCTGGAGTTGGAGTGAGAGCAGTGGGTTGCCCCTTTGCTCAGATGAGCAATCCAGTGTATACATaGCCATCCTTTTTGCTTCCC +
Preference number: 2 (lower is better)
Translates to: PTSGVGVRAVGCPFAQMSNPVYT*PSFLLP
Trigger: GGGAAGCAAAAAGGATGGCCATGTATACACTGGATT...GCTCATCTGAGCAAAGGGGCAACCCACTGCTCTCACTCCAACTCCAGAGGTAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000604641.6
3UTR-3UTR GCA 90 bp CAAGGGCAGAATCACATGCATTTAATAACTTATGGGAGTTATGGAAACAGGTGGCTTCTGACCCACTCCTaGCCAAGGCCCTGTGTGGAG +
Preference number: 2 (lower is better)
Translates to: QGQNHMHLITYGSYGNRWLLTHS*PRPCVE
Trigger: CTCCACACAGGGCCTTGGGCAGGAGTGGGTCAGAAG...CCACCTGTTTCCATAACTCCCATAAGTTATTAAATGCATGTGATTCTGCCCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604641.6
3UTR GCA 72 bp CATGCTGCACTGGTGGGGCCGGGGGCTTCAGGAAGCTaGCTGGCTTGTGTGAGAGGGATGTGCAGCGGCAGG +
Preference number: 3 (lower is better)
Translates to: HAALVGPGASGS*LACVRGMCSGR
Trigger: CCTGCCGCTGCACATCCCTCTCACACAAGCCAGGCAGCTTCCTGAAGCCCCCGGCCCCACCAGTGCAGCATG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618498.1
3UTR CCA 72 bp ATCCCGGAGTGGCAGCCTGAGGCCCAGGCACTCGGCTaGGCCAAAGGAACGAGGCAGGGGAGATGGTCCTCT +
Preference number: 3 (lower is better)
Translates to: IPEWQPEAQALG*AKGTRQGRWSS
Trigger: AGAGGACCATCTCCCCTGCCTCGTTCCTTTGGCCCAGCCGAGTGCCTGGGCCTCAGGCTGCCACTCCGGGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618498.1
3UTR GCA 72 bp CTGAAGCTCCATCCACCCGGGATGCCTCCCCTCCCTTaGTGCCCAGCACAGCTCTCAACAGCCTGTCCTTGG +
Preference number: 3 (lower is better)
Translates to: LKLHPPGMPPLP*CPAQLSTACPW
Trigger: CCAAGGACAGGCTGTTGAGAGCTGTGCTGGGCAGCAAGGGAGGGGAGGCATCCCGGGTGGATGGAGCTTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618498.1
3UTR CCA 72 bp GGGTGGGCTGTCCCCAGCTGTCGGCTGCCTCCAAGATaGGATGAGAGACCTCTCCTGGCACCTCAGGAATGG +
Preference number: 3 (lower is better)
Translates to: GWAVPSCRLPPR*DERPLLAPQEW
Trigger: CCATTCCTGAGGTGCCAGGAGAGGTCTCTCATCCCATCTTGGAGGCAGCCGACAGCTGGGGACAGCCCACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618498.1
3UTR CCA 72 bp TCTGGCTCCCAACTTCCCTTTGAGGCTTCCCGGTCCTaGGGTAACAGCTGGCTTAGGGGAGCCAGTCGGGGC +
Preference number: 3 (lower is better)
Translates to: SGSQLPFEASRS*GNSWLRGASRG
Trigger: GCCCCGACTGGCTCCCCTAAGCCAGCTGTTACCCCAGGACCGGGAAGCCTCAAAGGGAAGTTGGGAGCCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618498.1
3UTR CCA 72 bp GGCCTGGGGATTCGTGAAGGCTGCTTCTCAGGCCTGTaGTCTCTCCGGGGCCGAATCCTGGGTCTCAGCTTC +
Preference number: 3 (lower is better)
Translates to: GLGIREGCFSGL*SLRGRILGLSF
Trigger: GAAGCTGAGACCCAGGATTCGGCCCCGGAGAGACCACAGGCCTGAGAAGCAGCCTTCACGAATCCCCAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618498.1
3UTR-3UTR CAA 90 bp CCTGGGCCCACTCTGTCTGGCTCCCAACTTCCCTTTGAGGCTTCCCGGTCCTGGGGCCTTGGACAGGGGTaGGAGAACGGACAGACTCTG +
Preference number: 3 (lower is better)
Translates to: PGPTLSGSQLPFEASRSWGLGQG*ENGQTL
Trigger: CAGAGTCTGTCCGTTCTCCAACCCCTGTCCAAGGCC...CCAGGACCGGGAAGCCTCAAAGGGAAGTTGGGAGCCAGACAGAGTGGGCCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618498.1
3UTR TCA 72 bp AGCAGTCCCCATGCGTGGACCCAGCCAGGTCCACAGTaGCGGCCCTTAGTGGGATGGGGTCTCTCCCAAGTT +
Preference number: 3 (lower is better)
Translates to: SSPHAWTQPGPQ*RPLVGWGLSQV
Trigger: AACTTGGGAGAGACCCCATCCCACTAAGGGCCGTCACTGTGGACCTGGCTGGGTCCACGCATGGGGACTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618498.1
3UTR CCA 72 bp GGGGTTGGAGAACGGACAGACTCTGGCTCCCTGAACTaGAAGAACGCACCCTTGGCCTCATCCCGGAGTGGC +
Preference number: 3 (lower is better)
Translates to: GVGERTDSGSLN*KNAPLASSRSG
Trigger: GCCACTCCGGGATGAGGCCAAGGGTGCGTTCTTCCAGTTCAGGGAGCCAGAGTCTGTCCGTTCTCCAACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618498.1
3UTR CCA 72 bp CACAGTAGAAGCCGAGCAGTCCTGCCCTCCCTGAGGTaGGACCTTCCTCATGTGGGTGCCCTTGGCACTCAG +
Preference number: 3 (lower is better)
Translates to: HSRSRAVLPSLR*DLPHVGALGTQ
Trigger: CTGAGTGCCAAGGGCACCCACATGAGGAAGGTCCCACCTCAGGGAGGGCAGGACTGCTCGGCTTCTACTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618498.1
3UTR CCA 72 bp GCTTCTCAGGCCTGTGGTCTCTCCGGGGCCGAATCCTaGGTCTCAGCTTCAGCTTGTAGATGGACGGGACCC +
Preference number: 3 (lower is better)
Translates to: ASQACGLSGAES*VSASACRWTGP
Trigger: GGGTCCCGTCCATCTACAAGCTGAAGCTGAGACCCAGGATTCGGCCCCGGAGAGACCACAGGCCTGAGAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618498.1
3UTR CCA 72 bp GCCTGGCTGGACCCAGGAAGACATAGGCCAGTGGCCTaGGGATTCGTGAAGGCTGCTTCTCAGGCCTGTGGT +
Preference number: 3 (lower is better)
Translates to: AWLDPGRHRPVA*GFVKAASQACG
Trigger: ACCACAGGCCTGAGAAGCAGCCTTCACGAATCCCCAGGCCACTGGCCTATGTCTTCCTGGGTCCAGCCAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618498.1
3UTR-3UTR CAA 90 bp GCCGGATGGGGATCTTGGTTAGGCCTTGGACAGGGGTTGGAGAACGGACAGACTTGGAAGAACGCACCCTaGGCCTCATCCCGGAGTGGC +
Preference number: 3 (lower is better)
Translates to: AGWGSWLGLGQGLENGQTWKNAP*ASSRSG
Trigger: GCCACTCCGGGATGAGGCCAAGGGTGCGTTCTTCCA...AGTCTGTCCGTTCTCCAACCCCTGTCCAAGGCCTAACCAAGATCCCCATCCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618498.1
3UTR-3UTR CAA 90 bp CGTGAAGGCTGCTTCTCAGGCCTGTGGTCTCTCCGGGGCCGAATCCTGGGTCTCGCTACAGTAGATGGCTaGCTCCTTGTTCCCGCCCAA +
Preference number: 3 (lower is better)
Translates to: REGCFSGLWSLRGRILGLATVDG*LLVPAQ
Trigger: TTGGGCGGGAACAAGGAGCAAGCCATCTACTGTAGC...GAGACCCAGGATTCGGCCCCGGAGAGACCACAGGCCTGAGAAGCAGCCTTCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618498.1
3UTR TCA 72 bp GGACAGGGGTTGGAGAACGGACAGACTCTGGCTCCCTaGACTGGAAGAACGCACCCTTGGCCTCATCCCGGA +
Preference number: 3 (lower is better)
Translates to: GQGLENGQTLAP*TGRTHPWPHPG
Trigger: TCCGGGATGAGGCCAAGGGTGCGTTCTTCCAGTTCAGGGAGCCAGAGTCTGTCCGTTCTCCAACCCCTGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618498.1
3UTR GCA 72 bp GTCTGTGAGGGTCCATCCTGTACCCTTACTTCATGCTaGACTGGTGGGGCCGGGGGCTTCAGGAAGCTGCCT +
Preference number: 3 (lower is better)
Translates to: VCEGPSCTLTSC*TGGAGGFRKLP
Trigger: AGGCAGCTTCCTGAAGCCCCCGGCCCCACCAGTGCAGCATGAAGTAAGGGTACAGGATGGACCCTCACAGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618498.1
3UTR GCA 72 bp TGGGTCTGTGAGGGTCCATCCTGTACCCTTACTTCATaGTGCACTGGTGGGGCCGGGGGCTTCAGGAAGCTG +
Preference number: 3 (lower is better)
Translates to: WVCEGPSCTLTS*CTGGAGGFRKL
Trigger: CAGCTTCCTGAAGCCCCCGGCCCCACCAGTGCAGCATGAAGTAAGGGTACAGGATGGACCCTCACAGACCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618498.1
3UTR CCA 72 bp GGGGCCGAATCCTGGGTCTCAGCTTCAGCTTGTAGATaGACGGGACCCTCTTGGGCTTCCGGAGAGTTCTCC +
Preference number: 3 (lower is better)
Translates to: GAESWVSASACR*TGPSWASGEFS
Trigger: GGAGAACTCTCCGGAAGCCCAAGAGGGTCCCGTCCATCTACAAGCTGAAGCTGAGACCCAGGATTCGGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618498.1
3UTR CCA 72 bp CTCTGGAGGTTGGGGGCTGCTCTCCAATGGAGCGGCTaGCTCTTTCTCCTCCTTTCCTTCCTCCTCCTCCTC +
Preference number: 3 (lower is better)
Translates to: LWRLGAALQWSG*LFLLLSFLLLL
Trigger: GAGGAGGAGGAGGAAGGAAAGGAGGAGAAAGAGCCAGCCGCTCCATTGGAGAGCAGCCCCCAACCTCCAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618498.1
3UTR-3UTR CAA 90 bp CGTGAAGGCTGCTTCTCAGGCCTGTGGTCTCTCCGGGGCCGAATCCTGGGTCTCCTTGCTGATATCCCTTaGGTGGTGGCCTCAATGGCT +
Preference number: 3 (lower is better)
Translates to: REGCFSGLWSLRGRILGLLADIP*VVASMA
Trigger: AGCCATTGAGGCCACCACCAAAGGGATATCAGCAAG...GAGACCCAGGATTCGGCCCCGGAGAGACCACAGGCCTGAGAAGCAGCCTTCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618498.1
3UTR-3UTR CAA 90 bp ACAGGGGTTGGAGAACGGACAGACTCTGGCTCCCTGAACTGGAAGAACGCACCCAGGAAGCTGCCTGGCTaGTGTGAGAGGGATGTGCAG +
Preference number: 3 (lower is better)
Translates to: TGVGERTDSGSLNWKNAPRKLPG*CERDVQ
Trigger: CTGCACATCCCTCTCACACAAGCCAGGCAGCTTCCT...GGGTGCGTTCTTCCAGTTCAGGGAGCCAGAGTCTGTCCGTTCTCCAACCCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618498.1
3UTR-3UTR CAA 90 bp CAGCTTCAGCTTGTAGATGGACGGGACCCTCTTGGGCTTCCGGAGAGTTCTCCTAGCCGGATGGGGATCTaGGTTAGGCCTTGGACAGGG +
Preference number: 3 (lower is better)
Translates to: QLQLVDGRDPLGLPESSPSRMGI*VRPWTG
Trigger: CCCTGTCCAAGGCCTAACCAAGATCCCCATCCGGCT...AGGAGAACTCTCCGGAAGCCCAAGAGGGTCCCGTCCATCTACAAGCTGAAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618498.1
3UTR-3UTR CAA 90 bp TCTCCCAAGTTCTGTCCTGGGACTTCCACTTGTAGCACCAGGAAAGCTCCTTCCAATGGCTCGGAGTCTTaGTGGGGTGGGGTTCCCGGC +
Preference number: 3 (lower is better)
Translates to: SPKFCPGTSTCSTRKAPSNGSES*WGGVPG
Trigger: GCCGGGAACCCCACCCCACAAAGACTCCGAGCCATT...GGAAGGAGCTTTCCTGGTGCTACAAGTGGAAGTCCCAGGACAGAACTTGGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618498.1
3UTR TCA 72 bp GCCAAAGGAACGAGGCAGGGGAGATGGTCCTCTTGCTaGTATCCCTTTGGTGGTGGCCTCAATGGCTCGGAG +
Preference number: 3 (lower is better)
Translates to: AKGTRQGRWSSC*YPFGGGLNGSE
Trigger: CTCCGAGCCATTGAGGCCACCACCAAAGGGATATCAGCAAGAGGACCATCTCCCCTGCCTCGTTCCTTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618498.1
3UTR GCA 72 bp GGACCCTCTTGGGCTTCCGGAGAGTTCTCCTGCCCTTaGTCAGACATGCCTTGGCTTTGTCAGAGTTGGGGT +
Preference number: 3 (lower is better)
Translates to: GPSWASGEFSCP*SDMPWLCQSWG
Trigger: ACCCCAACTCTGACAAAGCCAAGGCATGTCTGAGCAAGGGCAGGAGAACTCTCCGGAAGCCCAAGAGGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618498.1
3UTR GCA 72 bp TGGACGGGACCCTCTTGGGCTTCCGGAGAGTTCTCCTaGCCTTGCTCAGACATGCCTTGGCTTTGTCAGAGT +
Preference number: 3 (lower is better)
Translates to: WTGPSWASGEFS*PCSDMPWLCQS
Trigger: ACTCTGACAAAGCCAAGGCATGTCTGAGCAAGGGCAGGAGAACTCTCCGGAAGCCCAAGAGGGTCCCGTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618498.1
3UTR CCA 72 bp AGGATGGTCCTACTGCCCCTGGCCTACCTCTGGAGTTaGAGTGAGAGCAGTGGGTTGCCCCTTTGCTCAGAT +
Preference number: 3 (lower is better)
Translates to: RMVLLPLAYLWS*SESSGLPLCSD
Trigger: ATCTGAGCAAAGGGGCAACCCACTGCTCTCACTCCAACTCCAGAGGTAGGCCAGGGGCAGTAGGACCATCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604641.6
3UTR CCA 72 bp AGATACAGGATGGTCCTACTGCCCCTGGCCTACCTCTaGAGTTGGAGTGAGAGCAGTGGGTTGCCCCTTTGC +
Preference number: 3 (lower is better)
Translates to: RYRMVLLPLAYL*SWSESSGLPLC
Trigger: GCAAAGGGGCAACCCACTGCTCTCACTCCAACTCCAGAGGTAGGCCAGGGGCAGTAGGACCATCCTGTATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604641.6
3UTR CCA 72 bp GCAGGGGAGATGGTCCTCTTGCTGATATCCCTTTGGTaGTGGCCTCAATGGCTCGGAGTCTTTGTGGGGTGG +
Preference number: 3 (lower is better)
Translates to: AGEMVLLLISLW*WPQWLGVFVGW
Trigger: CCACCCCACAAAGACTCCGAGCCATTGAGGCCACCACCAAAGGGATATCAGCAAGAGGACCATCTCCCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618498.1
3UTR CCA 72 bp GTCTCAGCTTCAGCTTGTAGATGGACGGGACCCTCTTaGGCTTCCGGAGAGTTCTCCTGCCCTTGCTCAGAC +
Preference number: 3 (lower is better)
Translates to: VSASACRWTGPS*ASGEFSCPCSD
Trigger: GTCTGAGCAAGGGCAGGAGAACTCTCCGGAAGCCCAAGAGGGTCCCGTCCATCTACAAGCTGAAGCTGAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618498.1
3UTR CCA 72 bp TGTGCCTCAGACCCAGGACTCCTCCTCAGGTGGAAGTaGAGCTTGATTAAGCCAGTGAGGTTGCAGGCCCTC +
Preference number: 3 (lower is better)
Translates to: CASDPGLLLRWK*SLIKPVRLQAL
Trigger: GAGGGCCTGCAACCTCACTGGCTTAATCAAGCTCCACTTCCACCTGAGGAGGAGTCCTGGGTCTGAGGCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618498.1
3UTR-3UTR CAA 90 bp GGGGAGAGTAATGAGATACAGGATGGTCCTACTGCCCCTGGCCTACCTCTGGAGACATGGCCATCCTTTTaGCTTCCCTCCTACCCAACA +
Preference number: 3 (lower is better)
Translates to: GESNEIQDGPTAPGLPLETWPSF*LPSYPT
Trigger: TGTTGGGTAGGAGGGAAGCAAAAAGGATGGCCATGT...CTCCAGAGGTAGGCCAGGGGCAGTAGGACCATCCTGTATCTCATTACTCTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000604641.6
3UTR-3UTR CAA 90 bp CTTCGGTCTGAAGAGGTATATGTCTTCCAGTCCACAGGGGGTGGTGGGCTCTGTATGAAGATGAGGGTGTaGGAGTCACCCACACGGTAC +
Preference number: 3 (lower is better)
Translates to: LRSEEVYVFQSTGGGGLCMKMRV*ESPTRY
Trigger: GTACCGTGTGGGTGACTCCAACACCCTCATCTTCAT...ACAGAGCCCACCACCCCCTGTGGACTGGAAGACATATACCTCTTCAGACCGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618498.1
3UTR GCA 72 bp TGGCCTACCTCTGGAGTTGGAGTGAGAGCAGTGGGTTaGCCCTTTGCTCAGATGAGCAGATGGAGTCTATAT +
Preference number: 3 (lower is better)
Translates to: WPTSGVGVRAVG*PFAQMSRWSLY
Trigger: ATATAGACTCCATCTGCTCATCTGAGCAAAGGGGCAACCCACTGCTCTCACTCCAACTCCAGAGGTAGGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604641.6
3UTR CCA 72 bp CCTTCTGTTCCCGCAGCTGTGAATCCAGTGTATACATaGCCATCCTTTTTGCTTCCCTCCTACCCAACACGC +
Preference number: 3 (lower is better)
Translates to: PSVPAAVNPVYT*PSFLLPSYPTR
Trigger: GCGTGTTGGGTAGGAGGGAAGCAAAAAGGATGGCCATGTATACACTGGATTCACAGCTGCGGGAACAGAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000604641.6
3UTR TCA 72 bp GGAGGTGAGGGAACATCCCTTCTGTTCCCGCAGCTGTaGATCCAGTGTATACATGGCCATCCTTTTTGCTTC +
Preference number: 3 (lower is better)
Translates to: GGEGTSLLFPQL*IQCIHGHPFCF
Trigger: GAAGCAAAAAGGATGGCCATGTATACACTGGATTCACAGCTGCGGGAACAGAAGGGATGTTCCCTCACCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000604641.6
3UTR GCA 72 bp CTCTGGAGTTGGAGTGAGAGCAGTGGGTTGCCCCTTTaGTCAGATGAGCAGATGGAGTCTATATTTGTCTTC +
Preference number: 3 (lower is better)
Translates to: LWSWSESSGLPL*SDEQMESIFVF
Trigger: GAAGACAAATATAGACTCCATCTGCTCATCTGAGCAAAGGGGCAACCCACTGCTCTCACTCCAACTCCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604641.6
3UTR CCA 72 bp GCAGAATCACATGCATTTAATAACTTATGGGAGTTATaGAAACAGGTGGGCATGGCCAGGGGCCAGAGGCCA +
Preference number: 3 (lower is better)
Translates to: AESHAFNNLWEL*KQVGMARGQRP
Trigger: TGGCCTCTGGCCCCTGGCCATGCCCACCTGTTTCCATAACTCCCATAAGTTATTAAATGCATGTGATTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR GCA 90 bp CTGCCCAAGGCCCTGTGTGGAGGTGAGGGAACATCCCTTCTGTTCCCGCAGCTGGGAGCCAGTCGGGGCTaGCTTCCAGGCTTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: LPKALCGGEGTSLLFPQLGASRG*LPGFQV
Trigger: GACCTGGAAGCCTGGAAGGCAGCCCCGACTGGCTCC...CAGCTGCGGGAACAGAAGGGATGTTCCCTCACCTCCACACAGGGCCTTGGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604641.6
3UTR CAA 72 bp ACAGACTCTGGCTCCCTGAACTGGAAGAACGCACCCTaGGCCTCATCCCGGAGTGGCAGCCTGAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: TDSGSLNWKNAP*ASSRSGSLRPR
Trigger: CCTGGGCCTCAGGCTGCCACTCCGGGATGAGGCCAAGGGTGCGTTCTTCCAGTTCAGGGAGCCAGAGTCTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618498.1
CDS-3UTR CCA 90 bp CTGCCCAAGGCCCTGTGTGGAGGTGAGGGAACATCCCTTCTGTTCCCGCAGCTGCCAGCTGCACGAGTGTaGGCGCCGCAACACCAAAGC +
Preference number: 4 (lower is better)
Translates to: LPKALCGGEGTSLLFPQLPAARV*APQHQS
Trigger: GCTTTGGTGTTGCGGCGCCCACACTCGTGCAGCTGG...CAGCTGCGGGAACAGAAGGGATGTTCCCTCACCTCCACACAGGGCCTTGGGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR CCA 90 bp CTGCCCAAGGCCCTGTGTGGAGGTGAGGGAACATCCCTTCTGTTCCCGCAGCTGTCAACAGCCTGTCCTTaGGGGGCTGCCTGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: LPKALCGGEGTSLLFPQLSTACP*GAAWLD
Trigger: GTCCAGCCAGGCAGCCCCCCAAGGACAGGCTGTTGA...CAGCTGCGGGAACAGAAGGGATGTTCCCTCACCTCCACACAGGGCCTTGGGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR TCA 90 bp CCCCTGGCCTACCTCTGGAGTTGGAGTGAGAGCAGTGGGTTGCCCCTTTGCTCAGCTGCCTGGCTTGTGTaGGAGGGATGTGCAGCGGCA +
Preference number: 4 (lower is better)
Translates to: PLAYLWSWSESSGLPLCSAAWLV*EGCAAA
Trigger: TGCCGCTGCACATCCCTCTCACACAAGCCAGGCAGC...TGAGCAAAGGGGCAACCCACTGCTCTCACTCCAACTCCAGAGGTAGGCCAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR CCA 90 bp CCCCTGGCCTACCTCTGGAGTTGGAGTGAGAGCAGTGGGTTGCCCCTTTGCTCAACTGCCCAGCCAGCCTaGGGATGTAGACCCCACTGC +
Preference number: 4 (lower is better)
Translates to: PLAYLWSWSESSGLPLCSTAQPA*GCRPHC
Trigger: GCAGTGGGGTCTACATCCCCAGGCTGGCTGGGCAGT...TGAGCAAAGGGGCAACCCACTGCTCTCACTCCAACTCCAGAGGTAGGCCAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR CCA 90 bp CTGCCCAAGGCCCTGTGTGGAGGTGAGGGAACATCCCTTCTGTTCCCGCAGCTGGAGGCTTCCCGGTCCTaGGGTAACAGCTGGCTTAGG +
Preference number: 4 (lower is better)
Translates to: LPKALCGGEGTSLLFPQLEASRS*GNSWLR
Trigger: CCTAAGCCAGCTGTTACCCCAGGACCGGGAAGCCTC...CAGCTGCGGGAACAGAAGGGATGTTCCCTCACCTCCACACAGGGCCTTGGGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR CCA 90 bp CTGCCCAAGGCCCTGTGTGGAGGTGAGGGAACATCCCTTCTGTTCCCGCAGCTGTGCTTCTCAGGCCTGTaGTCTCTCCGGGGCCGAATC +
Preference number: 4 (lower is better)
Translates to: LPKALCGGEGTSLLFPQLCFSGL*SLRGRI
Trigger: GATTCGGCCCCGGAGAGACCACAGGCCTGAGAAGCA...CAGCTGCGGGAACAGAAGGGATGTTCCCTCACCTCCACACAGGGCCTTGGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR TCA 90 bp CCAAGGCCCTGTGTGGAGGTGAGGGAACATCCCTTCTGTTCCCGCAGCTGTGAACAGCCAGGTCCACAGTaGCGGCCCTTAGTGGGATGG +
Preference number: 4 (lower is better)
Translates to: PRPCVEVREHPFCSRSCEQPGPQ*RPLVGW
Trigger: CCATCCCACTAAGGGCCGTCACTGTGGACCTGGCTG...TTCACAGCTGCGGGAACAGAAGGGATGTTCCCTCACCTCCACACAGGGCCTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR GCA 90 bp CCCCTGGCCTACCTCTGGAGTTGGAGTGAGAGCAGTGGGTTGCCCCTTTGCTCACCCGTTTCCAGCACCTaGAGGAAGTTGGCTGCGTCG +
Preference number: 4 (lower is better)
Translates to: PLAYLWSWSESSGLPLCSPVSST*RKLAAS
Trigger: CGACGCAGCCAACTTCCTGCAGGTGCTGGAAACGGG...TGAGCAAAGGGGCAACCCACTGCTCTCACTCCAACTCCAGAGGTAGGCCAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR GCA 90 bp CCCCTGGCCTACCTCTGGAGTTGGAGTGAGAGCAGTGGGTTGCCCCTTTGCTCAGCACCTCAGGAATGGTaGCATCTCTCTGGAGGCCCC +
Preference number: 4 (lower is better)
Translates to: PLAYLWSWSESSGLPLCSAPQEW*HLSGGP
Trigger: GGGGCCTCCAGAGAGATGGCACCATTCCTGAGGTGC...TGAGCAAAGGGGCAACCCACTGCTCTCACTCCAACTCCAGAGGTAGGCCAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR CCA 90 bp GGAGTCTATATTTGTCTTCTGACCCACTCCTGCCCAAGGCCCTGTGTGGAGGTGCTGCCTCCCGCAGGCTaGGACATGGCTGGACCCCAG +
Preference number: 4 (lower is better)
Translates to: GVYICLLTHSCPRPCVEVLPPAG*DMAGPQ
Trigger: CTGGGGTCCAGCCATGTCCCAGCCTGCGGGAGGCAG...CACCTCCACACAGGGCCTTGGGCAGGAGTGGGTCAGAAGACAAATATAGACTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR CCA 90 bp CCAAGGCCCTGTGTGGAGGTGAGGGAACATCCCTTCTGTTCCCGCAGCTGTGAAGGAGTCTTTGTGGGGTaGGGTTCCCGGCGTCGGTTC +
Preference number: 4 (lower is better)
Translates to: PRPCVEVREHPFCSRSCEGVFVG*GSRRRF
Trigger: GAACCGACGCCGGGAACCCCACCCCACAAAGACTCC...TTCACAGCTGCGGGAACAGAAGGGATGTTCCCTCACCTCCACACAGGGCCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR CCA 90 bp CCTACCTCTGGAGTTGGAGTGAGAGCAGTGGGTTGCCCCTTTGCTCAGATGAGCGGCTCGGAGTCTTTGTaGGGTGGGGTTCCCGGCGTC +
Preference number: 4 (lower is better)
Translates to: PTSGVGVRAVGCPFAQMSGSESL*GGVPGV
Trigger: GACGCCGGGAACCCCACCCCACAAAGACTCCGAGCC...GCTCATCTGAGCAAAGGGGCAACCCACTGCTCTCACTCCAACTCCAGAGGTAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR CCA 90 bp GTCTATATTTGTCTTCTGACCCACTCCTGCCCAAGGCCCTGTGTGGAGGTGAGGGGCCTCATCCCGGAGTaGCAGCCTGAGGCCCAGGCA +
Preference number: 4 (lower is better)
Translates to: VYICLLTHSCPRPCVEVRGLIPE*QPEAQA
Trigger: TGCCTGGGCCTCAGGCTGCCACTCCGGGATGAGGCC...CCTCACCTCCACACAGGGCCTTGGGCAGGAGTGGGTCAGAAGACAAATATAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR CCA 90 bp CCCCTGGCCTACCTCTGGAGTTGGAGTGAGAGCAGTGGGTTGCCCCTTTGCTCAGGAAGAACGCACCCTTaGCCTCATCCCGGAGTGGCA +
Preference number: 4 (lower is better)
Translates to: PLAYLWSWSESSGLPLCSGRTHP*PHPGVA
Trigger: TGCCACTCCGGGATGAGGCCAAGGGTGCGTTCTTCC...TGAGCAAAGGGGCAACCCACTGCTCTCACTCCAACTCCAGAGGTAGGCCAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604641.6
3UTR CAA 72 bp GTCCTGGGCCCACTCTGTCTGGCTCCCAACTTCCCTTaGAGGCTTCCCGGTCCTGGGGTAACAGCTGGCTTA +
Preference number: 4 (lower is better)
Translates to: VLGPLCLAPNFP*RLPGPGVTAGL
Trigger: TAAGCCAGCTGTTACCCCAGGACCGGGAAGCCTCAAAGGGAAGTTGGGAGCCAGACAGAGTGGGCCCAGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618498.1
CDS-3UTR TCA 90 bp CCCTGTGTGGAGGTGAGGGAACATCCCTTCTGTTCCCGCAGCTGTGAATCCAGTCCAGGGCAGCGTCAGTaGCAACGTTGGCGTGTTGGC +
Preference number: 4 (lower is better)
Translates to: PCVEVREHPFCSRSCESSPGQRQ*QRWRVG
Trigger: GCCAACACGCCAACGTTGTCACTGACGCTGCCCTGG...ACTGGATTCACAGCTGCGGGAACAGAAGGGATGTTCCCTCACCTCCACACAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR GCA 90 bp CCCTGTGTGGAGGTGAGGGAACATCCCTTCTGTTCCCGCAGCTGTGAATCCAGTGCCCGGGACCTCCAGTaGTGCTACTTGCCACTGGCT +
Preference number: 4 (lower is better)
Translates to: PCVEVREHPFCSRSCESSARDLQ*CYLPLA
Trigger: AGCCAGTGGCAAGTAGCAGCACTGGAGGTCCCGGGC...ACTGGATTCACAGCTGCGGGAACAGAAGGGATGTTCCCTCACCTCCACACAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR GCA 90 bp GAACATCCCTTCTGTTCCCGCAGCTGTGAATCCAGTGTATACATGGCCATCCTTGCTGGGCGGCCCCATTaGAGGAGACCCCGACCCGGG +
Preference number: 4 (lower is better)
Translates to: EHPFCSRSCESSVYMAILAGRPH*RRPRPG
Trigger: CCCGGGTCGGGGTCTCCTGCAATGGGGCCGCCCAGC...AAGGATGGCCATGTATACACTGGATTCACAGCTGCGGGAACAGAAGGGATGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR GCA 90 bp CTGCCCAAGGCCCTGTGTGGAGGTGAGGGAACATCCCTTCTGTTCCCGCAGCTGTTGACCATGGAGAACTaGACTGGGCACGTGCAGTGG +
Preference number: 4 (lower is better)
Translates to: LPKALCGGEGTSLLFPQLLTMEN*TGHVQW
Trigger: CCACTGCACGTGCCCAGTGCAGTTCTCCATGGTCAA...CAGCTGCGGGAACAGAAGGGATGTTCCCTCACCTCCACACAGGGCCTTGGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR GCA 90 bp GGGGAGAGTAATGAGATACAGGATGGTCCTACTGCCCCTGGCCTACCTCTGGAGACAGAGCAGTCCCCATaGGTGGACCCAGCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: GESNEIQDGPTAPGLPLETEQSP*VDPARS
Trigger: GGACCTGGCTGGGTCCACGCATGGGGACTGCTCTGT...CTCCAGAGGTAGGCCAGGGGCAGTAGGACCATCCTGTATCTCATTACTCTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR CCA 90 bp GGGAGAGTAATGAGATACAGGATGGTCCTACTGCCCCTGGCCTACCTCTGGAGTCCTCCTACCCTCTGCTaGCTGCGGCCACAGAGCCTG +
Preference number: 4 (lower is better)
Translates to: GRVMRYRMVLLPLAYLWSPPTLC*LRPQSL
Trigger: CAGGCTCTGTGGCCGCAGCCAGCAGAGGGTAGGAGG...ACTCCAGAGGTAGGCCAGGGGCAGTAGGACCATCCTGTATCTCATTACTCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR CCA 90 bp GGGGAGAGTAATGAGATACAGGATGGTCCTACTGCCCCTGGCCTACCTCTGGAGTCCTCCCGCTGCTGCTaGGTCTCGGCTGGGTTCTTC +
Preference number: 4 (lower is better)
Translates to: GESNEIQDGPTAPGLPLESSRCC*VSAGFF
Trigger: GAAGAACCCAGCCGAGACCCAGCAGCAGCGGGAGGA...CTCCAGAGGTAGGCCAGGGGCAGTAGGACCATCCTGTATCTCATTACTCTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR CCA 90 bp CCAAGGCCCTGTGTGGAGGTGAGGGAACATCCCTTCTGTTCCCGCAGCTGTGAATACTTCATGCTGCACTaGTGGGGCCGGGGGCTTCAG +
Preference number: 4 (lower is better)
Translates to: PRPCVEVREHPFCSRSCEYFMLH*WGRGLQ
Trigger: CTGAAGCCCCCGGCCCCACCAGTGCAGCATGAAGTA...TTCACAGCTGCGGGAACAGAAGGGATGTTCCCTCACCTCCACACAGGGCCTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR CCA 90 bp CCCTGTGTGGAGGTGAGGGAACATCCCTTCTGTTCCCGCAGCTGTGAATCCAGTATGGTGCCATCTCTCTaGAGGCCCCCGTCCCTGCTC +
Preference number: 4 (lower is better)
Translates to: PCVEVREHPFCSRSCESSMVPSL*RPPSLL
Trigger: GAGCAGGGACGGGGGCCTCCAGAGAGATGGCACCAT...ACTGGATTCACAGCTGCGGGAACAGAAGGGATGTTCCCTCACCTCCACACAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR CCA 90 bp GTCTATATTTGTCTTCTGACCCACTCCTGCCCAAGGCCCTGTGTGGAGGTGAGGGCCCAGGCACTCGGCTaGGCCAAAGGAACGAGGCAG +
Preference number: 4 (lower is better)
Translates to: VYICLLTHSCPRPCVEVRAQALG*AKGTRQ
Trigger: CTGCCTCGTTCCTTTGGCCCAGCCGAGTGCCTGGGC...CCTCACCTCCACACAGGGCCTTGGGCAGGAGTGGGTCAGAAGACAAATATAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR CCA 90 bp CCAAGGCCCTGTGTGGAGGTGAGGGAACATCCCTTCTGTTCCCGCAGCTGTGAAGGGACCTTCCTCATGTaGGTGCCCTTGGCACTCAGG +
Preference number: 4 (lower is better)
Translates to: PRPCVEVREHPFCSRSCEGTFLM*VPLALR
Trigger: CCTGAGTGCCAAGGGCACCCACATGAGGAAGGTCCC...TTCACAGCTGCGGGAACAGAAGGGATGTTCCCTCACCTCCACACAGGGCCTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604641.6
3UTR CAA 72 bp GGGACCCTCTTGGGCTTCCGGAGAGTTCTCCTGCCCTaGCTCAGACATGCCTTGGCTTTGTCAGAGTTGGGG +
Preference number: 4 (lower is better)
Translates to: GTLLGFRRVLLP*LRHALALSELG
Trigger: CCCCAACTCTGACAAAGCCAAGGCATGTCTGAGCAAGGGCAGGAGAACTCTCCGGAAGCCCAAGAGGGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618498.1
CDS-3UTR GCA 90 bp GAGAGTAATGAGATACAGGATGGTCCTACTGCCCCTGGCCTACCTCTGGAGTTGCCTCTTTCCTCCCGCTaGTGCTGGGTCTCGGCTGGG +
Preference number: 4 (lower is better)
Translates to: ESNEIQDGPTAPGLPLELPLSSR*CWVSAG
Trigger: CCCAGCCGAGACCCAGCAGCAGCGGGAGGAAAGAGG...CAACTCCAGAGGTAGGCCAGGGGCAGTAGGACCATCCTGTATCTCATTACTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR GCA 90 bp GGGAGAGTAATGAGATACAGGATGGTCCTACTGCCCCTGGCCTACCTCTGGAGTACCCTTACTTCATGCTaGACTGGTGGGGCCGGGGGC +
Preference number: 4 (lower is better)
Translates to: GRVMRYRMVLLPLAYLWSTLTSC*TGGAGG
Trigger: GCCCCCGGCCCCACCAGTGCAGCATGAAGTAAGGGT...ACTCCAGAGGTAGGCCAGGGGCAGTAGGACCATCCTGTATCTCATTACTCTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR GCA 90 bp CCAAGGCCCTGTGTGGAGGTGAGGGAACATCCCTTCTGTTCCCGCAGCTGTGAATGTACCCTTACTTCATaGTGCACTGGTGGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: PRPCVEVREHPFCSRSCECTLTS*CTGGAG
Trigger: CCCGGCCCCACCAGTGCAGCATGAAGTAAGGGTACA...TTCACAGCTGCGGGAACAGAAGGGATGTTCCCTCACCTCCACACAGGGCCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR GCA 90 bp GGGGAGAGTAATGAGATACAGGATGGTCCTACTGCCCCTGGCCTACCTCTGGAGCCAGACCTTGTGCCCTaGGGACAGGCACTCCTGACT +
Preference number: 4 (lower is better)
Translates to: GESNEIQDGPTAPGLPLEPDLVP*GQALLT
Trigger: AGTCAGGAGTGCCTGTCCGCAGGGCACAAGGTCTGG...CTCCAGAGGTAGGCCAGGGGCAGTAGGACCATCCTGTATCTCATTACTCTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR GCA 90 bp GGGAGAGTAATGAGATACAGGATGGTCCTACTGCCCCTGGCCTACCTCTGGAGTCTGGAGGTTGGGGGCTaGTCTCCAATGGAGCGGCTG +
Preference number: 4 (lower is better)
Translates to: GRVMRYRMVLLPLAYLWSLEVGG*SPMERL
Trigger: CAGCCGCTCCATTGGAGAGCAGCCCCCAACCTCCAG...ACTCCAGAGGTAGGCCAGGGGCAGTAGGACCATCCTGTATCTCATTACTCTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR GCA 90 bp CCAAGGCCCTGTGTGGAGGTGAGGGAACATCCCTTCTGTTCCCGCAGCTGTGAAACAGGATGGTCCTACTaGCCCTGGCCTACCTCTGGA +
Preference number: 4 (lower is better)
Translates to: PRPCVEVREHPFCSRSCETGWSY*PWPTSG
Trigger: TCCAGAGGTAGGCCAGGGGCAGTAGGACCATCCTGT...TTCACAGCTGCGGGAACAGAAGGGATGTTCCCTCACCTCCACACAGGGCCTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR CCA 90 bp TGTGTGGAGGTGAGGGAACATCCCTTCTGTTCCCGCAGCTGTGAATCCAGTGTAAGGCTGGGACATGGCTaGACCCCAGCAGGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: CVEVREHPFCSRSCESSVRLGHG*TPAGQE
Trigger: CTCCTGCCCTGCTGGGGTCCAGCCATGTCCCAGCCT...TACACTGGATTCACAGCTGCGGGAACAGAAGGGATGTTCCCTCACCTCCACACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR CCA 90 bp CCAAGGCCCTGTGTGGAGGTGAGGGAACATCCCTTCTGTTCCCGCAGCTGTGAAACAACGTTGGCGTGTTaGCACAGCACCAGGCCCGTT +
Preference number: 4 (lower is better)
Translates to: PRPCVEVREHPFCSRSCETTLAC*HSTRPV
Trigger: AACGGGCCTGGTGCTGTGCCAACACGCCAACGTTGT...TTCACAGCTGCGGGAACAGAAGGGATGTTCCCTCACCTCCACACAGGGCCTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR CCA 90 bp CCTACCTCTGGAGTTGGAGTGAGAGCAGTGGGTTGCCCCTTTGCTCAGATGAGCACTGGGCACGTGCAGTaGCTCACAAGGCTCTGCACC +
Preference number: 4 (lower is better)
Translates to: PTSGVGVRAVGCPFAQMSTGHVQ*LTRLCT
Trigger: GGTGCAGAGCCTTGTGAGCCACTGCACGTGCCCAGT...GCTCATCTGAGCAAAGGGGCAACCCACTGCTCTCACTCCAACTCCAGAGGTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR CCA 90 bp GGGAGAGTAATGAGATACAGGATGGTCCTACTGCCCCTGGCCTACCTCTGGAGTAGCAGTCCCCATGCGTaGACCCAGCCAGGTCCACAG +
Preference number: 4 (lower is better)
Translates to: GRVMRYRMVLLPLAYLWSSSPHA*TQPGPQ
Trigger: CTGTGGACCTGGCTGGGTCCACGCATGGGGACTGCT...ACTCCAGAGGTAGGCCAGGGGCAGTAGGACCATCCTGTATCTCATTACTCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR CCA 90 bp GGGGAGAGTAATGAGATACAGGATGGTCCTACTGCCCCTGGCCTACCTCTGGAGCTGCCCTCCCTGAGGTaGGACCTTCCTCATGTGGGT +
Preference number: 4 (lower is better)
Translates to: GESNEIQDGPTAPGLPLELPSLR*DLPHVG
Trigger: ACCCACATGAGGAAGGTCCCACCTCAGGGAGGGCAG...CTCCAGAGGTAGGCCAGGGGCAGTAGGACCATCCTGTATCTCATTACTCTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR TCA 90 bp GGGGAGAGTAATGAGATACAGGATGGTCCTACTGCCCCTGGCCTACCTCTGGAGTGGAGTTCACCCCTCTaGGGCCAGATGGAAGTGAGG +
Preference number: 4 (lower is better)
Translates to: GESNEIQDGPTAPGLPLEWSSPL*GQMEVR
Trigger: CCTCACTTCCATCTGGCCTCAGAGGGGTGAACTCCA...CTCCAGAGGTAGGCCAGGGGCAGTAGGACCATCCTGTATCTCATTACTCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR TCA 90 bp GTCTATATTTGTCTTCTGACCCACTCCTGCCCAAGGCCCTGTGTGGAGGTGAGGGGGTGGTGGGCTCTGTaGGCGGCTGATGGTCATTGT +
Preference number: 4 (lower is better)
Translates to: VYICLLTHSCPRPCVEVRGWWAL*AADGHC
Trigger: ACAATGACCATCAGCCGCTCACAGAGCCCACCACCC...CCTCACCTCCACACAGGGCCTTGGGCAGGAGTGGGTCAGAAGACAAATATAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR TCA 90 bp CTGCCCAAGGCCCTGTGTGGAGGTGAGGGAACATCCCTTCTGTTCCCGCAGCTGCCTCAGCCTTCGGTCTaGAGAGGTATATGTCTTCCA +
Preference number: 4 (lower is better)
Translates to: LPKALCGGEGTSLLFPQLPQPSV*RGICLP
Trigger: TGGAAGACATATACCTCTTCAGACCGAAGGCTGAGG...CAGCTGCGGGAACAGAAGGGATGTTCCCTCACCTCCACACAGGGCCTTGGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR TCA 90 bp GTGAGGGAACATCCCTTCTGTTCCCGCAGCTGTGAATCCAGTGTATACATGGCCCTCCCAACTTCCCTTTaGGGCTTCCCGGTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: VREHPFCSRSCESSVYMALPTSL*GFPVLG
Trigger: CCCCAGGACCGGGAAGCCTCAAAGGGAAGTTGGGAG...GGCCATGTATACACTGGATTCACAGCTGCGGGAACAGAAGGGATGTTCCCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR TCA 90 bp CCTACCTCTGGAGTTGGAGTGAGAGCAGTGGGTTGCCCCTTTGCTCAGATGAGCGGCCCTGTGTGGAGGTaGGGGAACATCCCTTCTGTT +
Preference number: 4 (lower is better)
Translates to: PTSGVGVRAVGCPFAQMSGPVWR*GNIPSV
Trigger: AACAGAAGGGATGTTCCCTCACCTCCACACAGGGCC...GCTCATCTGAGCAAAGGGGCAACCCACTGCTCTCACTCCAACTCCAGAGGTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR GCA 90 bp CCCTGTGTGGAGGTGAGGGAACATCCCTTCTGTTCCCGCAGCTGTGAATCCAGTAGAGATCAAGCTGGCTaGCTCCTACCCTCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: PCVEVREHPFCSRSCESSRDQAG*LLPSAG
Trigger: GCCAGCAGAGGGTAGGAGGCAGCCAGCTTGATCTCT...ACTGGATTCACAGCTGCGGGAACAGAAGGGATGTTCCCTCACCTCCACACAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR GCA 90 bp CCAAGGCCCTGTGTGGAGGTGAGGGAACATCCCTTCTGTTCCCGCAGCTGTGAAACCTTGCTCTCAGGCTaGCCAGTCCACTTGGAGTTC +
Preference number: 4 (lower is better)
Translates to: PRPCVEVREHPFCSRSCETLLSG*PVHLEF
Trigger: GAACTCCAAGTGGACTGGGCAGCCTGAGAGCAAGGT...TTCACAGCTGCGGGAACAGAAGGGATGTTCCCTCACCTCCACACAGGGCCTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR GCA 90 bp CCAAGGCCCTGTGTGGAGGTGAGGGAACATCCCTTCTGTTCCCGCAGCTGTGAATGTGTGAGAGGGATGTaGAGCGGCAGGGGTCATGTT +
Preference number: 4 (lower is better)
Translates to: PRPCVEVREHPFCSRSCECVRGM*SGRGHV
Trigger: AACATGACCCCTGCCGCTGCACATCCCTCTCACACA...TTCACAGCTGCGGGAACAGAAGGGATGTTCCCTCACCTCCACACAGGGCCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR GCA 90 bp CCTACCTCTGGAGTTGGAGTGAGAGCAGTGGGTTGCCCCTTTGCTCAGATGAGCAGCTGCTGGTCCTCCTaGCTCACTTCCACAGAGCAG +
Preference number: 4 (lower is better)
Translates to: PTSGVGVRAVGCPFAQMSSCWSS*LTSTEQ
Trigger: CTGCTCTGTGGAAGTGAGGCAGGAGGACCAGCAGCT...GCTCATCTGAGCAAAGGGGCAACCCACTGCTCTCACTCCAACTCCAGAGGTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR GCA 90 bp CCTACCTCTGGAGTTGGAGTGAGAGCAGTGGGTTGCCCCTTTGCTCAGATGAGCGGACTCTCTGGCCTCTaGCATGACCTGGATGTCCAG +
Preference number: 4 (lower is better)
Translates to: PTSGVGVRAVGCPFAQMSGLSGL*HDLDVQ
Trigger: CTGGACATCCAGGTCATGGCAGAGGCCAGAGAGTCC...GCTCATCTGAGCAAAGGGGCAACCCACTGCTCTCACTCCAACTCCAGAGGTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR GCA 90 bp CCCTGTGTGGAGGTGAGGGAACATCCCTTCTGTTCCCGCAGCTGTGAATCCAGTCCTTCCTCATGTGGGTaGCCTTGGCACTCAGGCTTG +
Preference number: 4 (lower is better)
Translates to: PCVEVREHPFCSRSCESSPSSCG*PWHSGL
Trigger: CAAGCCTGAGTGCCAAGGGCACCCACATGAGGAAGG...ACTGGATTCACAGCTGCGGGAACAGAAGGGATGTTCCCTCACCTCCACACAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR GCA 90 bp GGAGTCTATATTTGTCTTCTGACCCACTCCTGCCCAAGGCCCTGTGTGGAGGTGATGCCTCCCCTCCCTTaGTGCCCAGCACAGCTCTCA +
Preference number: 4 (lower is better)
Translates to: GVYICLLTHSCPRPCVEVMPPLP*CPAQLS
Trigger: TGAGAGCTGTGCTGGGCAGCAAGGGAGGGGAGGCAT...CACCTCCACACAGGGCCTTGGGCAGGAGTGGGTCAGAAGACAAATATAGACTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR GCA 90 bp GTTCCCGCAGCTGTGAATCCAGTGTATACATGGCCATCCTTTTTGCTTCCCTCCTCCATCCACCCGGGATaGCTCCCCTCCCTTGCTGCC +
Preference number: 4 (lower is better)
Translates to: VPAAVNPVYTWPSFLLPSSIHPG*LPSLAA
Trigger: GGCAGCAAGGGAGGGGAGGCATCCCGGGTGGATGGA...GGAGGGAAGCAAAAAGGATGGCCATGTATACACTGGATTCACAGCTGCGGGAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR GCA 90 bp CCCTGTGTGGAGGTGAGGGAACATCCCTTCTGTTCCCGCAGCTGTGAATCCAGTCCCAACACGCTCATGTaGCTCAGACCCAGGACTCCT +
Preference number: 4 (lower is better)
Translates to: PCVEVREHPFCSRSCESSPNTLM*LRPRTP
Trigger: AGGAGTCCTGGGTCTGAGGCACATGAGCGTGTTGGG...ACTGGATTCACAGCTGCGGGAACAGAAGGGATGTTCCCTCACCTCCACACAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR GCA 90 bp GTCTATATTTGTCTTCTGACCCACTCCTGCCCAAGGCCCTGTGTGGAGGTGAGGCTTCTGACCCACTCCTaGCCAAGGCCCTGTGTGGAG +
Preference number: 4 (lower is better)
Translates to: VYICLLTHSCPRPCVEVRLLTHS*PRPCVE
Trigger: CTCCACACAGGGCCTTGGGCAGGAGTGGGTCAGAAG...CCTCACCTCCACACAGGGCCTTGGGCAGGAGTGGGTCAGAAGACAAATATAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR CCA 90 bp GTCTATATTTGTCTTCTGACCCACTCCTGCCCAAGGCCCTGTGTGGAGGTGAGGGCTGCTACTTGCCACTaGCTTCAGCTGCCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: VYICLLTHSCPRPCVEVRAATCH*LQLPGL
Trigger: CAGGCCTGGCAGCTGAAGCCAGTGGCAAGTAGCAGC...CCTCACCTCCACACAGGGCCTTGGGCAGGAGTGGGTCAGAAGACAAATATAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR CCA 90 bp CCCTGTGTGGAGGTGAGGGAACATCCCTTCTGTTCCCGCAGCTGTGAATCCAGTCATGGAGAACTGCACTaGGCACGTGCAGTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: PCVEVREHPFCSRSCESSHGELH*ARAVAH
Trigger: GTGAGCCACTGCACGTGCCCAGTGCAGTTCTCCATG...ACTGGATTCACAGCTGCGGGAACAGAAGGGATGTTCCCTCACCTCCACACAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR CCA 90 bp GGGGAGAGTAATGAGATACAGGATGGTCCTACTGCCCCTGGCCTACCTCTGGAGCTGGCACCTCAGGAATaGTGCCATCTCTCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: GESNEIQDGPTAPGLPLELAPQE*CHLSGG
Trigger: GCCTCCAGAGAGATGGCACCATTCCTGAGGTGCCAG...CTCCAGAGGTAGGCCAGGGGCAGTAGGACCATCCTGTATCTCATTACTCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR CCA 90 bp GTCTATATTTGTCTTCTGACCCACTCCTGCCCAAGGCCCTGTGTGGAGGTGAGGGCCTCTGCCATGACCTaGATGTCCAGCTGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: VYICLLTHSCPRPCVEVRASAMT*MSSCWS
Trigger: GGACCAGCAGCTGGACATCCAGGTCATGGCAGAGGC...CCTCACCTCCACACAGGGCCTTGGGCAGGAGTGGGTCAGAAGACAAATATAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR CCA 90 bp GGGAGAGTAATGAGATACAGGATGGTCCTACTGCCCCTGGCCTACCTCTGGAGTGGCTTGCCTTTGTCCTaGGCCCACTCTGTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: GRVMRYRMVLLPLAYLWSGLPLS*AHSVWL
Trigger: GAGCCAGACAGAGTGGGCCCAGGACAAAGGCAAGCC...ACTCCAGAGGTAGGCCAGGGGCAGTAGGACCATCCTGTATCTCATTACTCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR CCA 90 bp CCTTCTGTTCCCGCAGCTGTGAATCCAGTGTATACATGGCCATCCTTTTTGCTTCCAAGGGCGAAGGTGTaGGGGCCTCCGGGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: PSVPAAVNPVYTWPSFLLPRAKV*GPPGWQ
Trigger: CTGCCAGCCCGGAGGCCCCCACACCTTCGCCCTTGG...AAGCAAAAAGGATGGCCATGTATACACTGGATTCACAGCTGCGGGAACAGAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR CCA 90 bp GGGGAGAGTAATGAGATACAGGATGGTCCTACTGCCCCTGGCCTACCTCTGGAGCCCCTGGCCTACCTCTaGAGTTGGAGTGAGAGCAGT +
Preference number: 4 (lower is better)
Translates to: GESNEIQDGPTAPGLPLEPLAYL*SWSESS
Trigger: ACTGCTCTCACTCCAACTCCAGAGGTAGGCCAGGGG...CTCCAGAGGTAGGCCAGGGGCAGTAGGACCATCCTGTATCTCATTACTCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR CCA 90 bp GGGGAGAGTAATGAGATACAGGATGGTCCTACTGCCCCTGGCCTACCTCTGGAGTGGTCCTACTGCCCCTaGCCTACCTCTGGAGTTGGA +
Preference number: 4 (lower is better)
Translates to: GESNEIQDGPTAPGLPLEWSYCP*PTSGVG
Trigger: TCCAACTCCAGAGGTAGGCCAGGGGCAGTAGGACCA...CTCCAGAGGTAGGCCAGGGGCAGTAGGACCATCCTGTATCTCATTACTCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR CCA 90 bp CCAAGGCCCTGTGTGGAGGTGAGGGAACATCCCTTCTGTTCCCGCAGCTGTGAAAGTTATGGAAACAGGTaGGCATGGCCAGGGGCCAGA +
Preference number: 4 (lower is better)
Translates to: PRPCVEVREHPFCSRSCESYGNR*AWPGAR
Trigger: TCTGGCCCCTGGCCATGCCCACCTGTTTCCATAACT...TTCACAGCTGCGGGAACAGAAGGGATGTTCCCTCACCTCCACACAGGGCCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604641.6
3UTR CAA 72 bp CGAGGCAGGGGAGATGGTCCTCTTGCTGATATCCCTTaGGTGGTGGCCTCAATGGCTCGGAGTCTTTGTGGG +
Preference number: 4 (lower is better)
Translates to: RGRGDGPLADIP*VVASMARSLCG
Trigger: CCCACAAAGACTCCGAGCCATTGAGGCCACCACCAAAGGGATATCAGCAAGAGGACCATCTCCCCTGCCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618498.1
3UTR CAA 72 bp CTGGGCCAAAGGAACGAGGCAGGGGAGATGGTCCTCTaGCTGATATCCCTTTGGTGGTGGCCTCAATGGCTC +
Preference number: 4 (lower is better)
Translates to: LGQRNEAGEMVL*LISLWWWPQWL
Trigger: GAGCCATTGAGGCCACCACCAAAGGGATATCAGCAAGAGGACCATCTCCCCTGCCTCGTTCCTTTGGCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618498.1
3UTR CAA 72 bp TCAGACCCAGGACTCCTCCTCAGGTGGAAGTGGAGCTaGATTAAGCCAGTGAGGTTGCAGGCCCTCTGGAGG +
Preference number: 4 (lower is better)
Translates to: SDPGLLLRWKWS*IKPVRLQALWR
Trigger: CCTCCAGAGGGCCTGCAACCTCACTGGCTTAATCAAGCTCCACTTCCACCTGAGGAGGAGTCCTGGGTCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618498.1
CDS-3UTR TCA 90 bp GTTCCCGCAGCTGTGAATCCAGTGTATACATGGCCATCCTTTTTGCTTCCCTCCTTCCCGTGTACTCGCTaGGAGCCCGGGACCTCCAGT +
Preference number: 4 (lower is better)
Translates to: VPAAVNPVYTWPSFLLPSFPCTR*EPGTSS
Trigger: ACTGGAGGTCCCGGGCTCTCAGCGAGTACACGGGAA...GGAGGGAAGCAAAAAGGATGGCCATGTATACACTGGATTCACAGCTGCGGGAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR TCA 90 bp CCAAGGCCCTGTGTGGAGGTGAGGGAACATCCCTTCTGTTCCCGCAGCTGTGAAACTGCTCACTCGACTTaGAAGGCCGGATACTGCACA +
Preference number: 4 (lower is better)
Translates to: PRPCVEVREHPFCSRSCETAHST*KAGYCT
Trigger: TGTGCAGTATCCGGCCTTTCAAGTCGAGTGAGCAGT...TTCACAGCTGCGGGAACAGAAGGGATGTTCCCTCACCTCCACACAGGGCCTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR TCA 90 bp GTGAGGGAACATCCCTTCTGTTCCCGCAGCTGTGAATCCAGTGTATACATGGCCGCCTCCAAGATGGGATaGGAGACCTCTCCTGGCACC +
Preference number: 4 (lower is better)
Translates to: VREHPFCSRSCESSVYMAASKMG*ETSPGT
Trigger: GGTGCCAGGAGAGGTCTCTCATCCCATCTTGGAGGC...GGCCATGTATACACTGGATTCACAGCTGCGGGAACAGAAGGGATGTTCCCTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR TCA 90 bp CCAAGGCCCTGTGTGGAGGTGAGGGAACATCCCTTCTGTTCCCGCAGCTGTGAAAGATGGTCCTCTTGCTaGTATCCCTTTGGTGGTGGC +
Preference number: 4 (lower is better)
Translates to: PRPCVEVREHPFCSRSCERWSSC*YPFGGG
Trigger: GCCACCACCAAAGGGATATCAGCAAGAGGACCATCT...TTCACAGCTGCGGGAACAGAAGGGATGTTCCCTCACCTCCACACAGGGCCTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR TCA 90 bp GAGAGTAATGAGATACAGGATGGTCCTACTGCCCCTGGCCTACCTCTGGAGTTGCTCCTCCTCACCTACTaGAGCTCCATCCACCCGGGA +
Preference number: 4 (lower is better)
Translates to: ESNEIQDGPTAPGLPLELLLLTY*SSIHPG
Trigger: TCCCGGGTGGATGGAGCTTCAGTAGGTGAGGAGGAG...CAACTCCAGAGGTAGGCCAGGGGCAGTAGGACCATCCTGTATCTCATTACTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR GCA 90 bp AGTGTATACATGGCCATCCTTTTTGCTTCCCTCCTACCCAACACGCTCATGTGCCTACCCTCTGCTGGCTaGGGCCACAGAGCCTGGGGT +
Preference number: 4 (lower is better)
Translates to: SVYMAILFASLLPNTLMCLPSAG*GHRAWG
Trigger: ACCCCAGGCTCTGTGGCCGCAGCCAGCAGAGGGTAG...GCACATGAGCGTGTTGGGTAGGAGGGAAGCAAAAAGGATGGCCATGTATACACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR GCA 90 bp GGGGAGAGTAATGAGATACAGGATGGTCCTACTGCCCCTGGCCTACCTCTGGAGGGGATTCGTGAAGGCTaGTTCTCAGGCCTGTGGTCT +
Preference number: 4 (lower is better)
Translates to: GESNEIQDGPTAPGLPLEGIREG*FSGLWS
Trigger: AGACCACAGGCCTGAGAAGCAGCCTTCACGAATCCC...CTCCAGAGGTAGGCCAGGGGCAGTAGGACCATCCTGTATCTCATTACTCTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR CCA 90 bp AGAGCAGTGGGTTGCCCCTTTGCTCAGATGAGCAGATGGAGTCTATATTTGTCTCCGCAGGCTGGGACATaGCTGGACCCCAGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: RAVGCPFAQMSRWSLYLSPQAGT*LDPSRA
Trigger: TGCCCTGCTGGGGTCCAGCCATGTCCCAGCCTGCGG...AGACAAATATAGACTCCATCTGCTCATCTGAGCAAAGGGGCAACCCACTGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR CCA 90 bp GTTCCCGCAGCTGTGAATCCAGTGTATACATGGCCATCCTTTTTGCTTCCCTCCTGGAAGGTACCTGGCTaGGCGGCCCCATTGCAGGAG +
Preference number: 4 (lower is better)
Translates to: VPAAVNPVYTWPSFLLPSWKVPG*AAPLQE
Trigger: CTCCTGCAATGGGGCCGCCCAGCCAGGTACCTTCCA...GGAGGGAAGCAAAAAGGATGGCCATGTATACACTGGATTCACAGCTGCGGGAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR CCA 90 bp GAACATCCCTTCTGTTCCCGCAGCTGTGAATCCAGTGTATACATGGCCATCCTTGGCCTGGAAGGTACCTaGCTGGGCGGCCCCATTGCA +
Preference number: 4 (lower is better)
Translates to: EHPFCSRSCESSVYMAILGLEGT*LGGPIA
Trigger: TGCAATGGGGCCGCCCAGCCAGGTACCTTCCAGGCC...AAGGATGGCCATGTATACACTGGATTCACAGCTGCGGGAACAGAAGGGATGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR CCA 90 bp GAGAGTAATGAGATACAGGATGGTCCTACTGCCCCTGGCCTACCTCTGGAGTTGGCCGGATGGGGATCTTaGTTAGGCCTTGGACAGGGG +
Preference number: 4 (lower is better)
Translates to: ESNEIQDGPTAPGLPLELAGWGS*LGLGQG
Trigger: CCCCTGTCCAAGGCCTAACCAAGATCCCCATCCGGC...CAACTCCAGAGGTAGGCCAGGGGCAGTAGGACCATCCTGTATCTCATTACTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR CCA 90 bp GTCTATATTTGTCTTCTGACCCACTCCTGCCCAAGGCCCTGTGTGGAGGTGAGGCGGCCCTTAGTGGGATaGGGTCTCTCCCAAGTTCTG +
Preference number: 4 (lower is better)
Translates to: VYICLLTHSCPRPCVEVRRPLVG*GLSQVL
Trigger: CAGAACTTGGGAGAGACCCCATCCCACTAAGGGCCG...CCTCACCTCCACACAGGGCCTTGGGCAGGAGTGGGTCAGAAGACAAATATAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR CCA 90 bp CCCTGTGTGGAGGTGAGGGAACATCCCTTCTGTTCCCGCAGCTGTGAATCCAGTTCATGTGGGTGCCCTTaGCACTCAGGCTTGCCTTTG +
Preference number: 4 (lower is better)
Translates to: PCVEVREHPFCSRSCESSSCGCP*HSGLPL
Trigger: CAAAGGCAAGCCTGAGTGCCAAGGGCACCCACATGA...ACTGGATTCACAGCTGCGGGAACAGAAGGGATGTTCCCTCACCTCCACACAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR CCA 90 bp GAGAGTAATGAGATACAGGATGGTCCTACTGCCCCTGGCCTACCTCTGGAGTTGGGGGCTGCTCTCCAATaGAGCGGCTGGCTCTTTCTC +
Preference number: 4 (lower is better)
Translates to: ESNEIQDGPTAPGLPLELGAALQ*SGWLFL
Trigger: GAGAAAGAGCCAGCCGCTCCATTGGAGAGCAGCCCC...CAACTCCAGAGGTAGGCCAGGGGCAGTAGGACCATCCTGTATCTCATTACTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR TCA 90 bp CCTTCTGTTCCCGCAGCTGTGAATCCAGTGTATACATGGCCATCCTTTTTGCTTCCCCACTGCGAGGGATaGCCCCAGACCTTGTGCCCT +
Preference number: 4 (lower is better)
Translates to: PSVPAAVNPVYTWPSFLLPHCEG*PQTLCP
Trigger: AGGGCACAAGGTCTGGGGTCATCCCTCGCAGTGGGG...AAGCAAAAAGGATGGCCATGTATACACTGGATTCACAGCTGCGGGAACAGAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR GCA 90 bp AGCTGTGAATCCAGTGTATACATGGCCATCCTTTTTGCTTCCCTCCTACCCAACCTGCCTCCTACCCTCTaGTGGCTGCGGCCACAGAGC +
Preference number: 4 (lower is better)
Translates to: SCESSVYMAILFASLLPNLPPTL*WLRPQS
Trigger: GCTCTGTGGCCGCAGCCAGCAGAGGGTAGGAGGCAG...GTTGGGTAGGAGGGAAGCAAAAAGGATGGCCATGTATACACTGGATTCACAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR GCA 90 bp CCTACCTCTGGAGTTGGAGTGAGAGCAGTGGGTTGCCCCTTTGCTCAGATGAGCATGGCCTCCAGGTACTaGTCACTCGACTTGAAAGGC +
Preference number: 4 (lower is better)
Translates to: PTSGVGVRAVGCPFAQMSMASRY*SLDLKG
Trigger: GCCTTTCAAGTCGAGTGAGCAGTACCTGGAGGCCAT...GCTCATCTGAGCAAAGGGGCAACCCACTGCTCTCACTCCAACTCCAGAGGTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR GCA 90 bp CCCTGTGTGGAGGTGAGGGAACATCCCTTCTGTTCCCGCAGCTGTGAATCCAGTTCAGCACCTCTTGGATaGCCATCTCCTTTCGACACC +
Preference number: 4 (lower is better)
Translates to: PCVEVREHPFCSRSCESSSAPLG*PSPFDT
Trigger: GGTGTCGAAAGGAGATGGGCATCCAAGAGGTGCTGA...ACTGGATTCACAGCTGCGGGAACAGAAGGGATGTTCCCTCACCTCCACACAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR GCA 90 bp GGAGTCTATATTTGTCTTCTGACCCACTCCTGCCCAAGGCCCTGTGTGGAGGTGCGTTCTTCACGTTCTTaGGCAGCACCAAGTCCTCCG +
Preference number: 4 (lower is better)
Translates to: GVYICLLTHSCPRPCVEVRSSRS*AAPSPP
Trigger: CGGAGGACTTGGTGCTGCGCAAGAACGTGAAGAACG...CACCTCCACACAGGGCCTTGGGCAGGAGTGGGTCAGAAGACAAATATAGACTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR GCA 90 bp TGTGTGGAGGTGAGGGAACATCCCTTCTGTTCCCGCAGCTGTGAATCCAGTGTAACTGCACTGGGCACGTaGAGTGGCTCACAAGGCTCT +
Preference number: 4 (lower is better)
Translates to: CVEVREHPFCSRSCESSVTALGT*SGSQGS
Trigger: AGAGCCTTGTGAGCCACTGCACGTGCCCAGTGCAGT...TACACTGGATTCACAGCTGCGGGAACAGAAGGGATGTTCCCTCACCTCCACACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR CCA 90 bp GAGGTGAGGGAACATCCCTTCTGTTCCCGCAGCTGTGAATCCAGTGTATACATGACATTGTCCCTGGCCTaGAAGGTACCTGGCTGGGCG +
Preference number: 4 (lower is better)
Translates to: EVREHPFCSRSCESSVYMTLSLA*KVPGWA
Trigger: CGCCCAGCCAGGTACCTTCCAGGCCAGGGACAATGT...CATGTATACACTGGATTCACAGCTGCGGGAACAGAAGGGATGTTCCCTCACCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR CCA 90 bp CCCTGTGTGGAGGTGAGGGAACATCCCTTCTGTTCCCGCAGCTGTGAATCCAGTACACGTACCATCACATaGTTCCGGAGGATCCGGATG +
Preference number: 4 (lower is better)
Translates to: PCVEVREHPFCSRSCESSTRTIT*FRRIRM
Trigger: CATCCGGATCCTCCGGAACCATGTGATGGTACGTGT...ACTGGATTCACAGCTGCGGGAACAGAAGGGATGTTCCCTCACCTCCACACAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR CCA 90 bp GAGGTGAGGGAACATCCCTTCTGTTCCCGCAGCTGTGAATCCAGTGTATACATGTTCATGCTGCACTGGTaGGGCCGGGGGCTTCAGGAA +
Preference number: 4 (lower is better)
Translates to: EVREHPFCSRSCESSVYMFMLHW*GRGLQE
Trigger: TTCCTGAAGCCCCCGGCCCCACCAGTGCAGCATGAA...CATGTATACACTGGATTCACAGCTGCGGGAACAGAAGGGATGTTCCCTCACCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR CCA 90 bp GGGGAGAGTAATGAGATACAGGATGGTCCTACTGCCCCTGGCCTACCTCTGGAGATCTTGGTTAGGCCTTaGACAGGGGTTGGAGAACGG +
Preference number: 4 (lower is better)
Translates to: GESNEIQDGPTAPGLPLEILVRP*TGVGER
Trigger: CCGTTCTCCAACCCCTGTCCAAGGCCTAACCAAGAT...CTCCAGAGGTAGGCCAGGGGCAGTAGGACCATCCTGTATCTCATTACTCTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR CCA 90 bp GGAGTCTATATTTGTCTTCTGACCCACTCCTGCCCAAGGCCCTGTGTGGAGGTGTGGCTTTGTCAGAGTTaGGGTCCAAGGGCGAAGGTG +
Preference number: 4 (lower is better)
Translates to: GVYICLLTHSCPRPCVEVWLCQS*GPRAKV
Trigger: CACCTTCGCCCTTGGACCCCAACTCTGACAAAGCCA...CACCTCCACACAGGGCCTTGGGCAGGAGTGGGTCAGAAGACAAATATAGACTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR TCA 90 bp GTTCCCGCAGCTGTGAATCCAGTGTATACATGGCCATCCTTTTTGCTTCCCTCCCTCCTCCCTCTTTCCTaGCGAGGTACACTGTGGGTC +
Preference number: 4 (lower is better)
Translates to: VPAAVNPVYTWPSFLLPSLLPLS*RGTLWV
Trigger: GACCCACAGTGTACCTCGTCAGGAAAGAGGGAGGAG...GGAGGGAAGCAAAAAGGATGGCCATGTATACACTGGATTCACAGCTGCGGGAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR GCA 90 bp AGCTGTGAATCCAGTGTATACATGGCCATCCTTTTTGCTTCCCTCCTACCCAACGCCCTGCAGCAACCTTaGTCTCAGGCTGCCCAGTCC +
Preference number: 4 (lower is better)
Translates to: SCESSVYMAILFASLLPNALQQP*SQAAQS
Trigger: GGACTGGGCAGCCTGAGAGCAAGGTTGCTGCAGGGC...GTTGGGTAGGAGGGAAGCAAAAAGGATGGCCATGTATACACTGGATTCACAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR GCA 90 bp GAGGTGAGGGAACATCCCTTCTGTTCCCGCAGCTGTGAATCCAGTGTATACATGCGGGACCTCCAGTGCTaGTACTTGCCACTGGCTTCA +
Preference number: 4 (lower is better)
Translates to: EVREHPFCSRSCESSVYMRDLQC*YLPLAS
Trigger: TGAAGCCAGTGGCAAGTAGCAGCACTGGAGGTCCCG...CATGTATACACTGGATTCACAGCTGCGGGAACAGAAGGGATGTTCCCTCACCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR GCA 90 bp AGAGCAGTGGGTTGCCCCTTTGCTCAGATGAGCAGATGGAGTCTATATTTGTCTCTTTCCTCCCGCTGCTaGTGGGTCTCGGCTGGGTTC +
Preference number: 4 (lower is better)
Translates to: RAVGCPFAQMSRWSLYLSLSSRC*WVSAGF
Trigger: GAACCCAGCCGAGACCCAGCAGCAGCGGGAGGAAAG...AGACAAATATAGACTCCATCTGCTCATCTGAGCAAAGGGGCAACCCACTGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR GCA 90 bp CCTTCTGTTCCCGCAGCTGTGAATCCAGTGTATACATGGCCATCCTTTTTGCTTATCTCCTCCTCCAGCTaGACGAGTGTGGGCGCCGCA +
Preference number: 4 (lower is better)
Translates to: PSVPAAVNPVYTWPSFLLISSSS*TSVGAA
Trigger: TGCGGCGCCCACACTCGTGCAGCTGGAGGAGGAGAT...AAGCAAAAAGGATGGCCATGTATACACTGGATTCACAGCTGCGGGAACAGAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR GCA 90 bp CCTTCTGTTCCCGCAGCTGTGAATCCAGTGTATACATGGCCATCCTTTTTGCTTCCATCTGGTCCAGGTTaGGGAAGTGGCAGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: PSVPAAVNPVYTWPSFLLPSGPG*GSGRAG
Trigger: GCCAGCCCTGCCACTTCCGCAACCTGGACCAGATGG...AAGCAAAAAGGATGGCCATGTATACACTGGATTCACAGCTGCGGGAACAGAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR GCA 90 bp AGTGTATACATGGCCATCCTTTTTGCTTCCCTCCTACCCAACACGCTCATGTGCGGGGCTTCAGGAAGCTaGCTGGCTTGTGTGAGAGGG +
Preference number: 4 (lower is better)
Translates to: SVYMAILFASLLPNTLMCGASGS*LACVRG
Trigger: CCCTCTCACACAAGCCAGGCAGCTTCCTGAAGCCCC...GCACATGAGCGTGTTGGGTAGGAGGGAAGCAAAAAGGATGGCCATGTATACACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR GCA 90 bp TGTGTGGAGGTGAGGGAACATCCCTTCTGTTCCCGCAGCTGTGAATCCAGTGTATCCGGAGAGTTCTCCTaGCCTTGCTCAGACATGCCT +
Preference number: 4 (lower is better)
Translates to: CVEVREHPFCSRSCESSVSGEFS*PCSDMP
Trigger: AGGCATGTCTGAGCAAGGGCAGGAGAACTCTCCGGA...TACACTGGATTCACAGCTGCGGGAACAGAAGGGATGTTCCCTCACCTCCACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR CCA 90 bp TGTGTGGAGGTGAGGGAACATCCCTTCTGTTCCCGCAGCTGTGAATCCAGTGTACTGCTGGGTCTCGGCTaGGTTCTTCCTGATTCTGAG +
Preference number: 4 (lower is better)
Translates to: CVEVREHPFCSRSCESSVLLGLG*VLPDSE
Trigger: CTCAGAATCAGGAAGAACCCAGCCGAGACCCAGCAG...TACACTGGATTCACAGCTGCGGGAACAGAAGGGATGTTCCCTCACCTCCACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR CCA 90 bp GAACATCCCTTCTGTTCCCGCAGCTGTGAATCCAGTGTATACATGGCCATCCTTGCACCTGCAGGAAGTTaGCTGCGTCGATGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: EHPFCSRSCESSVYMAILAPAGS*LRRCPA
Trigger: GGCTGGACATCGACGCAGCCAACTTCCTGCAGGTGC...AAGGATGGCCATGTATACACTGGATTCACAGCTGCGGGAACAGAAGGGATGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR CCA 90 bp GTTCCCGCAGCTGTGAATCCAGTGTATACATGGCCATCCTTTTTGCTTCCCTCCAGGCTCTGCACCATCTaGTCCAGGTTGCGGAAGTGG +
Preference number: 4 (lower is better)
Translates to: VPAAVNPVYTWPSFLLPSRLCTI*SRLRKW
Trigger: CCACTTCCGCAACCTGGACCAGATGGTGCAGAGCCT...GGAGGGAAGCAAAAAGGATGGCCATGTATACACTGGATTCACAGCTGCGGGAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR CCA 90 bp AGCTGTGAATCCAGTGTATACATGGCCATCCTTTTTGCTTCCCTCCTACCCAACTGGGTAGATGAGGACTaGGGGCTGGGTGGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: SCESSVYMAILFASLLPNWVDED*GLGGLS
Trigger: GGACAGCCCACCCAGCCCCCAGTCCTCATCTACCCA...GTTGGGTAGGAGGGAAGCAAAAAGGATGGCCATGTATACACTGGATTCACAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR CCA 90 bp GAGGTGAGGGAACATCCCTTCTGTTCCCGCAGCTGTGAATCCAGTGTATACATGGGGTCTCGGCCTTTTTaGGTAGATGAGGACTGGGGG +
Preference number: 4 (lower is better)
Translates to: EVREHPFCSRSCESSVYMGSRPF*VDEDWG
Trigger: CCCCCAGTCCTCATCTACCCAAAAAGGCCGAGACCC...CATGTATACACTGGATTCACAGCTGCGGGAACAGAAGGGATGTTCCCTCACCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR CCA 90 bp GAGGTGAGGGAACATCCCTTCTGTTCCCGCAGCTGTGAATCCAGTGTATACATGTCTGGCTCCCTGAACTaGAAGAACGCACCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: EVREHPFCSRSCESSVYMSGSLN*KNAPLA
Trigger: GGCCAAGGGTGCGTTCTTCCAGTTCAGGGAGCCAGA...CATGTATACACTGGATTCACAGCTGCGGGAACAGAAGGGATGTTCCCTCACCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR CCA 90 bp AGTGTATACATGGCCATCCTTTTTGCTTCCCTCCTACCCAACACGCTCATGTGCCAGGGGGCAGCCGGATaGGGATCTTGGTTAGGCCTT +
Preference number: 4 (lower is better)
Translates to: SVYMAILFASLLPNTLMCQGAAG*GSWLGL
Trigger: AAGGCCTAACCAAGATCCCCATCCGGCTGCCCCCTG...GCACATGAGCGTGTTGGGTAGGAGGGAAGCAAAAAGGATGGCCATGTATACACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR CCA 90 bp GAGAGTAATGAGATACAGGATGGTCCTACTGCCCCTGGCCTACCTCTGGAGTTGCACTTTAAGGAGGGATaGGGACCCCTGAGCCAGTTC +
Preference number: 4 (lower is better)
Translates to: ESNEIQDGPTAPGLPLELHFKEG*GPLSQF
Trigger: GAACTGGCTCAGGGGTCCCCATCCCTCCTTAAAGTG...CAACTCCAGAGGTAGGCCAGGGGCAGTAGGACCATCCTGTATCTCATTACTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR CCA 90 bp GTGAGGGAACATCCCTTCTGTTCCCGCAGCTGTGAATCCAGTGTATACATGGCCGCTTCAGCTTGTAGATaGACGGGACCCTCTTGGGCT +
Preference number: 4 (lower is better)
Translates to: VREHPFCSRSCESSVYMAASACR*TGPSWA
Trigger: AGCCCAAGAGGGTCCCGTCCATCTACAAGCTGAAGC...GGCCATGTATACACTGGATTCACAGCTGCGGGAACAGAAGGGATGTTCCCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR CCA 90 bp GGGGAGAGTAATGAGATACAGGATGGTCCTACTGCCCCTGGCCTACCTCTGGAGCTCCTCAGGTGGAAGTaGAGCTTGATTAAGCCAGTG +
Preference number: 4 (lower is better)
Translates to: GESNEIQDGPTAPGLPLELLRWK*SLIKPV
Trigger: CACTGGCTTAATCAAGCTCCACTTCCACCTGAGGAG...CTCCAGAGGTAGGCCAGGGGCAGTAGGACCATCCTGTATCTCATTACTCTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604641.6
3UTR CAA 72 bp GCCCAAAATCTCCTCTTCAAGGCTACAGTAGATGGCTaGCTCCTTGTTCCCGCCCAAGGGCAGAGGTGTGTA +
Preference number: 4 (lower is better)
Translates to: AQNLLFKATVDG*LLVPAQGQRCV
Trigger: TACACACCTCTGCCCTTGGGCGGGAACAAGGAGCAAGCCATCTACTGTAGCCTTGAAGAGGAGATTTTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618498.1
CDS-3UTR TCA 90 bp GAACATCCCTTCTGTTCCCGCAGCTGTGAATCCAGTGTATACATGGCCATCCTTTGTAGGCTGGGTCTGTaGGGGTCCATCCTGTACCCT +
Preference number: 4 (lower is better)
Translates to: EHPFCSRSCESSVYMAILCRLGL*GSILYP
Trigger: AGGGTACAGGATGGACCCTCACAGACCCAGCCTACA...AAGGATGGCCATGTATACACTGGATTCACAGCTGCGGGAACAGAAGGGATGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR GCA 90 bp GAGGTGAGGGAACATCCCTTCTGTTCCCGCAGCTGTGAATCCAGTGTATACATGTCCAGTGCTGCTACTTaGCACTGGCTTCAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: EVREHPFCSRSCESSVYMSSAAT*HWLQLP
Trigger: TGGCAGCTGAAGCCAGTGGCAAGTAGCAGCACTGGA...CATGTATACACTGGATTCACAGCTGCGGGAACAGAAGGGATGTTCCCTCACCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR CCA 90 bp AGTGTATACATGGCCATCCTTTTTGCTTCCCTCCTACCCAACACGCTCATGTGCTGCCAGAGCTTTCCCTaGTGGCCCTGCAGCAACCTT +
Preference number: 4 (lower is better)
Translates to: SVYMAILFASLLPNTLMCCQSFP*WPCSNL
Trigger: AAGGTTGCTGCAGGGCCACCAGGGAAAGCTCTGGCA...GCACATGAGCGTGTTGGGTAGGAGGGAAGCAAAAAGGATGGCCATGTATACACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR CCA 90 bp TGTGTGGAGGTGAGGGAACATCCCTTCTGTTCCCGCAGCTGTGAATCCAGTGTACTGATATCCCTTTGGTaGTGGCCTCAATGGCTCGGA +
Preference number: 4 (lower is better)
Translates to: CVEVREHPFCSRSCESSVLISLW*WPQWLG
Trigger: TCCGAGCCATTGAGGCCACCACCAAAGGGATATCAG...TACACTGGATTCACAGCTGCGGGAACAGAAGGGATGTTCCCTCACCTCCACACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR CCA 90 bp GGGAGAGTAATGAGATACAGGATGGTCCTACTGCCCCTGGCCTACCTCTGGAGTTTGCTGATATCCCTTTaGTGGTGGCCTCAATGGCTC +
Preference number: 4 (lower is better)
Translates to: GRVMRYRMVLLPLAYLWSLLISL*WWPQWL
Trigger: GAGCCATTGAGGCCACCACCAAAGGGATATCAGCAA...ACTCCAGAGGTAGGCCAGGGGCAGTAGGACCATCCTGTATCTCATTACTCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR CCA 90 bp GAACATCCCTTCTGTTCCCGCAGCTGTGAATCCAGTGTATACATGGCCATCCTTGCCTTGGACAGGGGTTaGAGAACGGACAGACTCTGG +
Preference number: 4 (lower is better)
Translates to: EHPFCSRSCESSVYMAILALDRG*RTDRLW
Trigger: CCAGAGTCTGTCCGTTCTCCAACCCCTGTCCAAGGC...AAGGATGGCCATGTATACACTGGATTCACAGCTGCGGGAACAGAAGGGATGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR CCA 90 bp AGCTGTGAATCCAGTGTATACATGGCCATCCTTTTTGCTTCCCTCCTACCCAACTCCTGGGGTAACAGCTaGCTTAGGGGAGCCAGTCGG +
Preference number: 4 (lower is better)
Translates to: SCESSVYMAILFASLLPNSWGNS*LRGASR
Trigger: CCGACTGGCTCCCCTAAGCCAGCTGTTACCCCAGGA...GTTGGGTAGGAGGGAAGCAAAAAGGATGGCCATGTATACACTGGATTCACAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR CCA 90 bp CCTTCTGTTCCCGCAGCTGTGAATCCAGTGTATACATGGCCATCCTTTTTGCTTTGGACGGGACCCTCTTaGGCTTCCGGAGAGTTCTCC +
Preference number: 4 (lower is better)
Translates to: PSVPAAVNPVYTWPSFLLWTGPS*ASGEFS
Trigger: GGAGAACTCTCCGGAAGCCCAAGAGGGTCCCGTCCA...AAGCAAAAAGGATGGCCATGTATACACTGGATTCACAGCTGCGGGAACAGAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR CCA 90 bp CCCCTGGCCTACCTCTGGAGTTGGAGTGAGAGCAGTGGGTTGCCCCTTTGCTCAAATCCAGTGTATACATaGCCATCCTTTTTGCTTCCC +
Preference number: 4 (lower is better)
Translates to: PLAYLWSWSESSGLPLCSNPVYT*PSFLLP
Trigger: GGGAAGCAAAAAGGATGGCCATGTATACACTGGATT...TGAGCAAAGGGGCAACCCACTGCTCTCACTCCAACTCCAGAGGTAGGCCAGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR TCA 90 bp GTGAGGGAACATCCCTTCTGTTCCCGCAGCTGTGAATCCAGTGTATACATGGCCTCTATATTTGTCTTCTaGCCCACTCCTGCCCAAGGC +
Preference number: 4 (lower is better)
Translates to: VREHPFCSRSCESSVYMASIFVF*PTPAQG
Trigger: GCCTTGGGCAGGAGTGGGTCAGAAGACAAATATAGA...GGCCATGTATACACTGGATTCACAGCTGCGGGAACAGAAGGGATGTTCCCTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR GCA 90 bp CAAGGGCAGAATCACATGCATTTAATAACTTATGGGAGTTATGGAAACAGGTGGCCAGGCTCAGGCCACTaGCCAGCCAGCCTGGGGATG +
Preference number: 4 (lower is better)
Translates to: QGQNHMHLITYGSYGNRWPGSGH*PASLGM
Trigger: CATCCCCAGGCTGGCTGGGCAGTGGCCTGAGCCTGG...CCACCTGTTTCCATAACTCCCATAAGTTATTAAATGCATGTGATTCTGCCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR GCA 90 bp GTTCCCGCAGCTGTGAATCCAGTGTATACATGGCCATCCTTTTTGCTTCCCTCCGAGTTCTCCTGCCCTTaGTCAGACATGCCTTGGCTT +
Preference number: 4 (lower is better)
Translates to: VPAAVNPVYTWPSFLLPSEFSCP*SDMPWL
Trigger: AAGCCAAGGCATGTCTGAGCAAGGGCAGGAGAACTC...GGAGGGAAGCAAAAAGGATGGCCATGTATACACTGGATTCACAGCTGCGGGAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR CCA 90 bp AGAGCAGTGGGTTGCCCCTTTGCTCAGATGAGCAGATGGAGTCTATATTTGTCTGGCATGGGAATCTTCTaGGCTTGGGCAGGTGCCTCA +
Preference number: 4 (lower is better)
Translates to: RAVGCPFAQMSRWSLYLSGMGIF*AWAGAS
Trigger: TGAGGCACCTGCCCAAGCCCAGAAGATTCCCATGCC...AGACAAATATAGACTCCATCTGCTCATCTGAGCAAAGGGGCAACCCACTGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR CCA 90 bp AGAGCAGTGGGTTGCCCCTTTGCTCAGATGAGCAGATGGAGTCTATATTTGTCTTGGTGGTGGCCTCAATaGCTCGGAGTCTTTGTGGGG +
Preference number: 4 (lower is better)
Translates to: RAVGCPFAQMSRWSLYLSWWWPQ*LGVFVG
Trigger: CCCCACAAAGACTCCGAGCCATTGAGGCCACCACCA...AGACAAATATAGACTCCATCTGCTCATCTGAGCAAAGGGGCAACCCACTGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR CCA 90 bp GTTCCCGCAGCTGTGAATCCAGTGTATACATGGCCATCCTTTTTGCTTCCCTCCATATCCCTTTGGTGGTaGCCTCAATGGCTCGGAGTC +
Preference number: 4 (lower is better)
Translates to: VPAAVNPVYTWPSFLLPSISLWW*PQWLGV
Trigger: GACTCCGAGCCATTGAGGCCACCACCAAAGGGATAT...GGAGGGAAGCAAAAAGGATGGCCATGTATACACTGGATTCACAGCTGCGGGAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR CCA 90 bp TGTGTGGAGGTGAGGGAACATCCCTTCTGTTCCCGCAGCTGTGAATCCAGTGTATGCTCAGACATGCCTTaGCTTTGTCAGAGTTGGGGT +
Preference number: 4 (lower is better)
Translates to: CVEVREHPFCSRSCESSVCSDMP*LCQSWG
Trigger: ACCCCAACTCTGACAAAGCCAAGGCATGTCTGAGCA...TACACTGGATTCACAGCTGCGGGAACAGAAGGGATGTTCCCTCACCTCCACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR CCA 90 bp CCTTCTGTTCCCGCAGCTGTGAATCCAGTGTATACATGGCCATCCTTTTTGCTTTCCGGGGCCGAATCCTaGGTCTCAGCTTCAGCTTGT +
Preference number: 4 (lower is better)
Translates to: PSVPAAVNPVYTWPSFLLSGAES*VSASAC
Trigger: ACAAGCTGAAGCTGAGACCCAGGATTCGGCCCCGGA...AAGCAAAAAGGATGGCCATGTATACACTGGATTCACAGCTGCGGGAACAGAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR CCA 90 bp AGTGTATACATGGCCATCCTTTTTGCTTCCCTCCTACCCAACACGCTCATGTGCCTCCAATGGAGCGGCTaGCTCTTTCTCCTCCTTTCC +
Preference number: 4 (lower is better)
Translates to: SVYMAILFASLLPNTLMCLQWSG*LFLLLS
Trigger: GGAAAGGAGGAGAAAGAGCCAGCCGCTCCATTGGAG...GCACATGAGCGTGTTGGGTAGGAGGGAAGCAAAAAGGATGGCCATGTATACACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR TCA 90 bp AGAGCAGTGGGTTGCCCCTTTGCTCAGATGAGCAGATGGAGTCTATATTTGTCTGAGGCCAGATGGAAGTaGGGACACTCCTCTCTTTCC +
Preference number: 4 (lower is better)
Translates to: RAVGCPFAQMSRWSLYLSEARWK*GHSSLS
Trigger: GGAAAGAGAGGAGTGTCCTCACTTCCATCTGGCCTC...AGACAAATATAGACTCCATCTGCTCATCTGAGCAAAGGGGCAACCCACTGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR TCA 90 bp AGAGCAGTGGGTTGCCCCTTTGCTCAGATGAGCAGATGGAGTCTATATTTGTCTGCGGACAGGCACTCCTaGCTTCTAGCAGCTTCATGT +
Preference number: 4 (lower is better)
Translates to: RAVGCPFAQMSRWSLYLSADRHS*LLAASC
Trigger: ACATGAAGCTGCTAGAAGTCAGGAGTGCCTGTCCGC...AGACAAATATAGACTCCATCTGCTCATCTGAGCAAAGGGGCAACCCACTGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR TCA 90 bp GAGAGTAATGAGATACAGGATGGTCCTACTGCCCCTGGCCTACCTCTGGAGTTGGCCCCTTTGCTCAGATaGGCAGATGGAGTCTATATT +
Preference number: 4 (lower is better)
Translates to: ESNEIQDGPTAPGLPLELAPLLR*ADGVYI
Trigger: AATATAGACTCCATCTGCTCATCTGAGCAAAGGGGC...CAACTCCAGAGGTAGGCCAGGGGCAGTAGGACCATCCTGTATCTCATTACTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR GCA 90 bp AGAGCAGTGGGTTGCCCCTTTGCTCAGATGAGCAGATGGAGTCTATATTTGTCTCTGCAGGAAGTTGGCTaGGTCGATGTCCAGCCCATA +
Preference number: 4 (lower is better)
Translates to: RAVGCPFAQMSRWSLYLSLQEVG*VDVQPI
Trigger: TATGGGCTGGACATCGACGCAGCCAACTTCCTGCAG...AGACAAATATAGACTCCATCTGCTCATCTGAGCAAAGGGGCAACCCACTGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR GCA 90 bp AGAGCAGTGGGTTGCCCCTTTGCTCAGATGAGCAGATGGAGTCTATATTTGTCTTGGCTCACAAGGCTCTaGACCATCTGGTCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: RAVGCPFAQMSRWSLYLSWLTRL*TIWSRL
Trigger: CAACCTGGACCAGATGGTGCAGAGCCTTGTGAGCCA...AGACAAATATAGACTCCATCTGCTCATCTGAGCAAAGGGGCAACCCACTGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR GCA 90 bp CAAGGGCAGAATCACATGCATTTAATAACTTATGGGAGTTATGGAAACAGGTGGGTGTACCGCCCCTCCTaGTCCTGTAGGCCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: QGQNHMHLITYGSYGNRWVYRPS*SCRPRS
Trigger: GGACCTGGGCCTACAGGAGCAGGAGGGGCGGTACAC...CCACCTGTTTCCATAACTCCCATAAGTTATTAAATGCATGTGATTCTGCCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR GCA 90 bp GTTCCCGCAGCTGTGAATCCAGTGTATACATGGCCATCCTTTTTGCTTCCCTCCGCCCTTGCTCAGACATaGCTTGGCTTTGTCAGAGTT +
Preference number: 4 (lower is better)
Translates to: VPAAVNPVYTWPSFLLPSALAQT*LGFVRV
Trigger: AACTCTGACAAAGCCAAGGCATGTCTGAGCAAGGGC...GGAGGGAAGCAAAAAGGATGGCCATGTATACACTGGATTCACAGCTGCGGGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR GCA 90 bp CCTTCTGTTCCCGCAGCTGTGAATCCAGTGTATACATGGCCATCCTTTTTGCTTGTGAGAGCAGTGGGTTaGCCCTTTGCTCAGATGAGC +
Preference number: 4 (lower is better)
Translates to: PSVPAAVNPVYTWPSFLLVRAVG*PFAQMS
Trigger: GCTCATCTGAGCAAAGGGGCAACCCACTGCTCTCAC...AAGCAAAAAGGATGGCCATGTATACACTGGATTCACAGCTGCGGGAACAGAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR CCA 90 bp AGAGCAGTGGGTTGCCCCTTTGCTCAGATGAGCAGATGGAGTCTATATTTGTCTCCAGGTCTTCCTTCATaGCCTCCAGGTACTGCTCAC +
Preference number: 4 (lower is better)
Translates to: RAVGCPFAQMSRWSLYLSPGLPS*PPGTAH
Trigger: GTGAGCAGTACCTGGAGGCCATGAAGGAAGACCTGG...AGACAAATATAGACTCCATCTGCTCATCTGAGCAAAGGGGCAACCCACTGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR CCA 90 bp CCTTCTGTTCCCGCAGCTGTGAATCCAGTGTATACATGGCCATCCTTTTTGCTTATGAGAGACCTCTCCTaGCACCTCAGGAATGGTGCC +
Preference number: 4 (lower is better)
Translates to: PSVPAAVNPVYTWPSFLLMRDLS*HLRNGA
Trigger: GGCACCATTCCTGAGGTGCCAGGAGAGGTCTCTCAT...AAGCAAAAAGGATGGCCATGTATACACTGGATTCACAGCTGCGGGAACAGAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR CCA 90 bp AGTGTATACATGGCCATCCTTTTTGCTTCCCTCCTACCCAACACGCTCATGTGCCATGAACCCAAGATGTaGGAATCCTTCCCCTGGGGA +
Preference number: 4 (lower is better)
Translates to: SVYMAILFASLLPNTLMCHEPKM*ESFPWG
Trigger: TCCCCAGGGGAAGGATTCCCACATCTTGGGTTCATG...GCACATGAGCGTGTTGGGTAGGAGGGAAGCAAAAAGGATGGCCATGTATACACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR GCA 90 bp GTCTATATTTGTCTTCTGACCCACTCCTGCCCAAGGCCCTGTGTGGAGGTGAGGCTAGCAGCTTCATGTTaGCCAAAATCTCCTCTTCAA +
Preference number: 4 (lower is better)
Translates to: VYICLLTHSCPRPCVEVRLAASC*PKSPLQ
Trigger: TTGAAGAGGAGATTTTGGGCAACATGAAGCTGCTAG...CCTCACCTCCACACAGGGCCTTGGGCAGGAGTGGGTCAGAAGACAAATATAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR GCA 90 bp AGAGCAGTGGGTTGCCCCTTTGCTCAGATGAGCAGATGGAGTCTATATTTGTCTAGTGGGTTGCCCCTTTaGTCAGATGAGCAGATGGAG +
Preference number: 4 (lower is better)
Translates to: RAVGCPFAQMSRWSLYLSSGLPL*SDEQME
Trigger: CTCCATCTGCTCATCTGAGCAAAGGGGCAACCCACT...AGACAAATATAGACTCCATCTGCTCATCTGAGCAAAGGGGCAACCCACTGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR CCA 90 bp AGAGCAGTGGGTTGCCCCTTTGCTCAGATGAGCAGATGGAGTCTATATTTGTCTATGGTCATTGTAGGCTaGGTCTGTGAGGGTCCATCC +
Preference number: 4 (lower is better)
Translates to: RAVGCPFAQMSRWSLYLSMVIVG*VCEGPS
Trigger: GGATGGACCCTCACAGACCCAGCCTACAATGACCAT...AGACAAATATAGACTCCATCTGCTCATCTGAGCAAAGGGGCAACCCACTGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR TCA 90 bp CAAGGGCAGAATCACATGCATTTAATAACTTATGGGAGTTATGGAAACAGGTGGAGGGATGGGGACCCCTaGGCCAGTTCTTGGATGGCT +
Preference number: 4 (lower is better)
Translates to: QGQNHMHLITYGSYGNRWRDGDP*ASSWMA
Trigger: AGCCATCCAAGAACTGGCTCAGGGGTCCCCATCCCT...CCACCTGTTTCCATAACTCCCATAAGTTATTAAATGCATGTGATTCTGCCCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR TCA 90 bp CAAGGGCAGAATCACATGCATTTAATAACTTATGGGAGTTATGGAAACAGGTGGAGGCCAGGAGTGTGGTaGGCCGTTCTAGGGGAGAGT +
Preference number: 4 (lower is better)
Translates to: QGQNHMHLITYGSYGNRWRPGVW*AVLGES
Trigger: ACTCTCCCCTAGAACGGCTCACCACACTCCTGGCCT...CCACCTGTTTCCATAACTCCCATAAGTTATTAAATGCATGTGATTCTGCCCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR CCA 90 bp AGCTGTGAATCCAGTGTATACATGGCCATCCTTTTTGCTTCCCTCCTACCCAACAGAACGGACAGACTCTaGCTCCCTGAACTGGAAGAA +
Preference number: 4 (lower is better)
Translates to: SCESSVYMAILFASLLPNRTDRL*LPELEE
Trigger: TTCTTCCAGTTCAGGGAGCCAGAGTCTGTCCGTTCT...GTTGGGTAGGAGGGAAGCAAAAAGGATGGCCATGTATACACTGGATTCACAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR CCA 90 bp AGAGCAGTGGGTTGCCCCTTTGCTCAGATGAGCAGATGGAGTCTATATTTGTCTAACATCAGCACCTCTTaGATGCCCATCTCCTTTCGA +
Preference number: 4 (lower is better)
Translates to: RAVGCPFAQMSRWSLYLSNISTS*MPISFR
Trigger: TCGAAAGGAGATGGGCATCCAAGAGGTGCTGATGTT...AGACAAATATAGACTCCATCTGCTCATCTGAGCAAAGGGGCAACCCACTGCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR TCA 90 bp CAAGGGCAGAATCACATGCATTTAATAACTTATGGGAGTTATGGAAACAGGTGGCTGTTCCCGCAGCTGTaGATCCAGTGTATACATGGC +
Preference number: 4 (lower is better)
Translates to: QGQNHMHLITYGSYGNRWLFPQL*IQCIHG
Trigger: GCCATGTATACACTGGATTCACAGCTGCGGGAACAG...CCACCTGTTTCCATAACTCCCATAAGTTATTAAATGCATGTGATTCTGCCCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR GCA 90 bp CAAGGGCAGAATCACATGCATTTAATAACTTATGGGAGTTATGGAAACAGGTGGCATGGCCATCCTTTTTaGTTCCCTCCTACCCAACAC +
Preference number: 4 (lower is better)
Translates to: QGQNHMHLITYGSYGNRWHGHPF*FPPTQH
Trigger: GTGTTGGGTAGGAGGGAAGCAAAAAGGATGGCCATG...CCACCTGTTTCCATAACTCCCATAAGTTATTAAATGCATGTGATTCTGCCCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR CCA 90 bp CAAGGGCAGAATCACATGCATTTAATAACTTATGGGAGTTATGGAAACAGGTGGGGACTCCTCCTCAGGTaGAAGTGGAGCTTGATTAAG +
Preference number: 4 (lower is better)
Translates to: QGQNHMHLITYGSYGNRWGLLLR*KWSLIK
Trigger: CTTAATCAAGCTCCACTTCCACCTGAGGAGGAGTCC...CCACCTGTTTCCATAACTCCCATAAGTTATTAAATGCATGTGATTCTGCCCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR CCA 90 bp CAAGGGCAGAATCACATGCATTTAATAACTTATGGGAGTTATGGAAACAGGTGGTCCTTTCGACACCACTaGATGAAGTTAGAGACATTG +
Preference number: 4 (lower is better)
Translates to: QGQNHMHLITYGSYGNRWSFRHH*MKLETL
Trigger: CAATGTCTCTAACTTCATCCAGTGGTGTCGAAAGGA...CCACCTGTTTCCATAACTCCCATAAGTTATTAAATGCATGTGATTCTGCCCTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS GCA 90 bp GGAGACCCCGACCCGGGGCATGGGAATCTTCTGGGCTTGGGCAGGTaGCTCAGCCAGGAAGGCCAGGGCAGCGTCAGTGACAACGTTGGC +
Preference number: 5 (lower is better)
Translates to: GDPDPGHGNLLGLGR*LSQEGQGSVSDNVG
Trigger: GCCAACGTTGTCACTGACGCTGCCCTGGCCTTCCTGGCTGAGGCACCTGCCCAAGCCCAGAAGATTCCCATGCCCCGGGTCGGGGTCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS GCA 90 bp TCTGAGGTTCCCGTGTACTCGCTGAGAGCCCGGGACCTCCAGTGCTaGTACTTGCCACTGGCTTCAGCTGCCAGGCCTGGCCCAGCCCCT +
Preference number: 5 (lower is better)
Translates to: SEVPVYSLRARDLQC*YLPLASAARPGPAP
Trigger: AGGGGCTGGGCCAGGCCTGGCAGCTGAAGCCAGTGGCAAGTAGCAGCACTGGAGGTCCCGGGCTCTCAGCGAGTACACGGGAACCTCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS GCA 90 bp GATTCTGAGGTTCCCGTGTACTCGCTGAGAGCCCGGGACCTCCAGTaGTGCTACTTGCCACTGGCTTCAGCTGCCAGGCCTGGCCCAGCC +
Preference number: 5 (lower is better)
Translates to: DSEVPVYSLRARDLQ*CYLPLASAARPGPA
Trigger: GGCTGGGCCAGGCCTGGCAGCTGAAGCCAGTGGCAAGTAGCAGCACTGGAGGTCCCGGGCTCTCAGCGAGTACACGGGAACCTCAGAATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR CAA 90 bp CCCCTGGCCTACCTCTGGAGTTGGAGTGAGAGCAGTGGGTTGCCCCTTTGCTCAGGCCCTGCAGCAACCTaGCTCTCAGGCTGCCCAGTC +
Preference number: 5 (lower is better)
Translates to: PLAYLWSWSESSGLPLCSGPAAT*LSGCPV
Trigger: GACTGGGCAGCCTGAGAGCAAGGTTGCTGCAGGGCC...TGAGCAAAGGGGCAACCCACTGCTCTCACTCCAACTCCAGAGGTAGGCCAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS CCA 90 bp TCTCCCACTGCCGCCTCTTTCCTCCCGCTGCTGCTGGGTCTCGGCTaGGTTCTTCCTGATTCTGAGGTTCCCGTGTACTCGCTGAGAGCC +
Preference number: 5 (lower is better)
Translates to: SPTAASFLPLLLGLG*VLPDSEVPVYSLRA
Trigger: GGCTCTCAGCGAGTACACGGGAACCTCAGAATCAGGAAGAACCCAGCCGAGACCCAGCAGCAGCGGGAGGAAAGAGGCGGCAGTGGGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS CCA 90 bp CGTGTTGGCACAGCACCAGGCCCGTTTCCAGCACCTGCAGGAAGTTaGCTGCGTCGATGTCCAGCCCATAGAGGTCGCGAAGCCACTCAG +
Preference number: 5 (lower is better)
Translates to: RVGTAPGPFPAPAGS*LRRCPAHRGREATQ
Trigger: CTGAGTGGCTTCGCGACCTCTATGGGCTGGACATCGACGCAGCCAACTTCCTGCAGGTGCTGGAAACGGGCCTGGTGCTGTGCCAACACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS CCA 90 bp TCAGCCAGGAAGGCCAGGGCAGCGTCAGTGACAACGTTGGCGTGTTaGCACAGCACCAGGCCCGTTTCCAGCACCTGCAGGAAGTTGGCT +
Preference number: 5 (lower is better)
Translates to: SARKARAASVTTLAC*HSTRPVSSTCRKLA
Trigger: AGCCAACTTCCTGCAGGTGCTGGAAACGGGCCTGGTGCTGTGCCAACACGCCAACGTTGTCACTGACGCTGCCCTGGCCTTCCTGGCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR CAA 90 bp GAGGTGAGGGAACATCCCTTCTGTTCCCGCAGCTGTGAATCCAGTGTATACATGGGCTGGGCGGCCCCATaGCAGGAGACCCCGACCCGG +
Preference number: 5 (lower is better)
Translates to: EVREHPFCSRSCESSVYMGWAAP*QETPTR
Trigger: CCGGGTCGGGGTCTCCTGCAATGGGGCCGCCCAGCC...CATGTATACACTGGATTCACAGCTGCGGGAACAGAAGGGATGTTCCCTCACCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS GCA 90 bp GCCAGAGCTTTCCCTGGTGGCCCTGCAGCAACCTTGCTCTCAGGCTaGCCAGTCCACTTGGAGTTCACCCCTCTGAGGCCAGATGGAAGT +
Preference number: 5 (lower is better)
Translates to: ARAFPGGPAATLLSG*PVHLEFTPLRPDGS
Trigger: ACTTCCATCTGGCCTCAGAGGGGTGAACTCCAAGTGGACTGGGCAGCCTGAGAGCAAGGTTGCTGCAGGGCCACCAGGGAAAGCTCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR CAA 90 bp CCCCTGGCCTACCTCTGGAGTTGGAGTGAGAGCAGTGGGTTGCCCCTTTGCTCACTCCAGTGCTGCTACTaGCCACTGGCTTCAGCTGCC +
Preference number: 5 (lower is better)
Translates to: PLAYLWSWSESSGLPLCSLQCCY*PLASAA
Trigger: GGCAGCTGAAGCCAGTGGCAAGTAGCAGCACTGGAG...TGAGCAAAGGGGCAACCCACTGCTCTCACTCCAACTCCAGAGGTAGGCCAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS TCA 90 bp GTCTCGGCTGGGTTCTTCCTGATTCTGAGGTTCCCGTGTACTCGCTaGGAGCCCGGGACCTCCAGTGCTGCTACTTGCCACTGGCTTCAG +
Preference number: 5 (lower is better)
Translates to: VSAGFFLILRFPCTR*EPGTSSAATCHWLQ
Trigger: CTGAAGCCAGTGGCAAGTAGCAGCACTGGAGGTCCCGGGCTCTCAGCGAGTACACGGGAACCTCAGAATCAGGAAGAACCCAGCCGAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS CCA 90 bp TCCTTTCGACACCACTGGATGAAGTTAGAGACATTGTCCCTGGCCTaGAAGGTACCTGGCTGGGCGGCCCCATTGCAGGAGACCCCGACC +
Preference number: 5 (lower is better)
Translates to: SFRHHWMKLETLSLA*KVPGWAAPLQETPT
Trigger: GGTCGGGGTCTCCTGCAATGGGGCCGCCCAGCCAGGTACCTTCCAGGCCAGGGACAATGTCTCTAACTTCATCCAGTGGTGTCGAAAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR CAA 90 bp CCAAGGCCCTGTGTGGAGGTGAGGGAACATCCCTTCTGTTCCCGCAGCTGTGAAGGCCTTGGACAGGGGTaGGAGAACGGACAGACTCTG +
Preference number: 5 (lower is better)
Translates to: PRPCVEVREHPFCSRSCEGLGQG*ENGQTL
Trigger: CAGAGTCTGTCCGTTCTCCAACCCCTGTCCAAGGCC...TTCACAGCTGCGGGAACAGAAGGGATGTTCCCTCACCTCCACACAGGGCCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR CAA 90 bp CTGCCCAAGGCCCTGTGTGGAGGTGAGGGAACATCCCTTCTGTTCCCGCAGCTGAGAGTTCTCCTGCCCTaGCTCAGACATGCCTTGGCT +
Preference number: 5 (lower is better)
Translates to: LPKALCGGEGTSLLFPQLRVLLP*LRHALA
Trigger: AGCCAAGGCATGTCTGAGCAAGGGCAGGAGAACTCT...CAGCTGCGGGAACAGAAGGGATGTTCCCTCACCTCCACACAGGGCCTTGGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR CAA 90 bp CCCCTGGCCTACCTCTGGAGTTGGAGTGAGAGCAGTGGGTTGCCCCTTTGCTCAAGTGAGAGCAGTGGGTaGCCCCTTTGCTCAGATGAG +
Preference number: 5 (lower is better)
Translates to: PLAYLWSWSESSGLPLCSSESSG*PLCSDE
Trigger: CTCATCTGAGCAAAGGGGCAACCCACTGCTCTCACT...TGAGCAAAGGGGCAACCCACTGCTCTCACTCCAACTCCAGAGGTAGGCCAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS TCA 90 bp CTGCCCAGTCCACTTGGAGTTCACCCCTCTGAGGCCAGATGGAAGTaGGGACACTCCTCTCTTTCCCCAGAGCTGGAGAGATCAAGCTGG +
Preference number: 5 (lower is better)
Translates to: LPSPLGVHPSEARWK*GHSSLSPELERSSW
Trigger: CCAGCTTGATCTCTCCAGCTCTGGGGAAAGAGAGGAGTGTCCTCACTTCCATCTGGCCTCAGAGGGGTGAACTCCAAGTGGACTGGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS TCA 90 bp CAACCTTGCTCTCAGGCTGCCCAGTCCACTTGGAGTTCACCCCTCTaGGGCCAGATGGAAGTGAGGACACTCCTCTCTTTCCCCAGAGCT +
Preference number: 5 (lower is better)
Translates to: QPCSQAAQSTWSSPL*GQMEVRTLLSFPRA
Trigger: AGCTCTGGGGAAAGAGAGGAGTGTCCTCACTTCCATCTGGCCTCAGAGGGGTGAACTCCAAGTGGACTGGGCAGCCTGAGAGCAAGGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR CAA 90 bp TGTGTGGAGGTGAGGGAACATCCCTTCTGTTCCCGCAGCTGTGAATCCAGTGTAGGCTGCCCAGTCCACTaGGAGTTCACCCCTCTGAGG +
Preference number: 5 (lower is better)
Translates to: CVEVREHPFCSRSCESSVGCPVH*EFTPLR
Trigger: CCTCAGAGGGGTGAACTCCAAGTGGACTGGGCAGCC...TACACTGGATTCACAGCTGCGGGAACAGAAGGGATGTTCCCTCACCTCCACACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR CAA 90 bp GAGAGTAATGAGATACAGGATGGTCCTACTGCCCCTGGCCTACCTCTGGAGTTGGCTCCCAACTTCCCTTaGAGGCTTCCCGGTCCTGGG +
Preference number: 5 (lower is better)
Translates to: ESNEIQDGPTAPGLPLELAPNFP*RLPGPG
Trigger: CCCAGGACCGGGAAGCCTCAAAGGGAAGTTGGGAGC...CAACTCCAGAGGTAGGCCAGGGGCAGTAGGACCATCCTGTATCTCATTACTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR CAA 90 bp GAGAGTAATGAGATACAGGATGGTCCTACTGCCCCTGGCCTACCTCTGGAGTTGGCGTCAGTGACAACGTaGGCGTGTTGGCACAGCACC +
Preference number: 5 (lower is better)
Translates to: ESNEIQDGPTAPGLPLELASVTT*ACWHST
Trigger: GGTGCTGTGCCAACACGCCAACGTTGTCACTGACGC...CAACTCCAGAGGTAGGCCAGGGGCAGTAGGACCATCCTGTATCTCATTACTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR CAA 90 bp GTTCCCGCAGCTGTGAATCCAGTGTATACATGGCCATCCTTTTTGCTTCCCTCCTGGAAGAACGCACCCTaGGCCTCATCCCGGAGTGGC +
Preference number: 5 (lower is better)
Translates to: VPAAVNPVYTWPSFLLPSWKNAP*ASSRSG
Trigger: GCCACTCCGGGATGAGGCCAAGGGTGCGTTCTTCCA...GGAGGGAAGCAAAAAGGATGGCCATGTATACACTGGATTCACAGCTGCGGGAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR CAA 90 bp CCAAGGCCCTGTGTGGAGGTGAGGGAACATCCCTTCTGTTCCCGCAGCTGTGAACCCCTGAGCCAGTTCTaGGATGGCTTTGTCATAAGG +
Preference number: 5 (lower is better)
Translates to: PRPCVEVREHPFCSRSCEPLSQF*DGFVIR
Trigger: CCTTATGACAAAGCCATCCAAGAACTGGCTCAGGGG...TTCACAGCTGCGGGAACAGAAGGGATGTTCCCTCACCTCCACACAGGGCCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR CAA 90 bp CCCTGTGTGGAGGTGAGGGAACATCCCTTCTGTTCCCGCAGCTGTGAATCCAGTATTAAGCCAGTGAGGTaGCAGGCCCTCTGGAGGTTG +
Preference number: 5 (lower is better)
Translates to: PCVEVREHPFCSRSCESSIKPVR*QALWRL
Trigger: CAACCTCCAGAGGGCCTGCAACCTCACTGGCTTAAT...ACTGGATTCACAGCTGCGGGAACAGAAGGGATGTTCCCTCACCTCCACACAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR CAA 90 bp CCTACCTCTGGAGTTGGAGTGAGAGCAGTGGGTTGCCCCTTTGCTCAGATGAGCGAACATCAGCACCTCTaGGATGCCCATCTCCTTTCG +
Preference number: 5 (lower is better)
Translates to: PTSGVGVRAVGCPFAQMSEHQHL*DAHLLS
Trigger: CGAAAGGAGATGGGCATCCAAGAGGTGCTGATGTTC...GCTCATCTGAGCAAAGGGGCAACCCACTGCTCTCACTCCAACTCCAGAGGTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR CAA 90 bp GGGGAGAGTAATGAGATACAGGATGGTCCTACTGCCCCTGGCCTACCTCTGGAGATGAAGATGAGGGTGTaGGAGTCACCCACACGGTAC +
Preference number: 5 (lower is better)
Translates to: GESNEIQDGPTAPGLPLEMKMRV*ESPTRY
Trigger: GTACCGTGTGGGTGACTCCAACACCCTCATCTTCAT...CTCCAGAGGTAGGCCAGGGGCAGTAGGACCATCCTGTATCTCATTACTCTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR CAA 90 bp GGGAGAGTAATGAGATACAGGATGGTCCTACTGCCCCTGGCCTACCTCTGGAGTGGGGAGATGGTCCTCTaGCTGATATCCCTTTGGTGG +
Preference number: 5 (lower is better)
Translates to: GRVMRYRMVLLPLAYLWSGEMVL*LISLWW
Trigger: CCACCAAAGGGATATCAGCAAGAGGACCATCTCCCC...ACTCCAGAGGTAGGCCAGGGGCAGTAGGACCATCCTGTATCTCATTACTCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS GCA 90 bp TACATGGCCATCCTTTTTGCTTCCCTCCTACCCAACACGCTCATGTaGCTCAGACCCAGGACTCCTCCTCAGGTGGAAGTGGAGCTTGAT +
Preference number: 5 (lower is better)
Translates to: YMAILFASLLPNTLM*LRPRTPPQVEVELD
Trigger: ATCAAGCTCCACTTCCACCTGAGGAGGAGTCCTGGGTCTGAGGCACATGAGCGTGTTGGGTAGGAGGGAAGCAAAAAGGATGGCCATGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR CAA 90 bp GGAGTCTATATTTGTCTTCTGACCCACTCCTGCCCAAGGCCCTGTGTGGAGGTGTACTGCTCACTCGACTaGAAAGGCCGGATACTGCAC +
Preference number: 5 (lower is better)
Translates to: GVYICLLTHSCPRPCVEVYCSLD*KGRILH
Trigger: GTGCAGTATCCGGCCTTTCAAGTCGAGTGAGCAGTA...CACCTCCACACAGGGCCTTGGGCAGGAGTGGGTCAGAAGACAAATATAGACTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR CAA 90 bp GAACATCCCTTCTGTTCCCGCAGCTGTGAATCCAGTGTATACATGGCCATCCTTAGCACCTGCAGGAAGTaGGCTGCGTCGATGTCCAGC +
Preference number: 5 (lower is better)
Translates to: EHPFCSRSCESSVYMAILSTCRK*AASMSS
Trigger: GCTGGACATCGACGCAGCCAACTTCCTGCAGGTGCT...AAGGATGGCCATGTATACACTGGATTCACAGCTGCGGGAACAGAAGGGATGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR CAA 90 bp CCTTCTGTTCCCGCAGCTGTGAATCCAGTGTATACATGGCCATCCTTTTTGCTTGACAACGTTGGCGTGTaGGCACAGCACCAGGCCCGT +
Preference number: 5 (lower is better)
Translates to: PSVPAAVNPVYTWPSFLLDNVGV*AQHQAR
Trigger: ACGGGCCTGGTGCTGTGCCAACACGCCAACGTTGTC...AAGCAAAAAGGATGGCCATGTATACACTGGATTCACAGCTGCGGGAACAGAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR CAA 90 bp CCTTCTGTTCCCGCAGCTGTGAATCCAGTGTATACATGGCCATCCTTTTTGCTTACCATCTGGTCCAGGTaGCGGAAGTGGCAGGGCTGG +
Preference number: 5 (lower is better)
Translates to: PSVPAAVNPVYTWPSFLLTIWSR*RKWQGW
Trigger: CCAGCCCTGCCACTTCCGCAACCTGGACCAGATGGT...AAGCAAAAAGGATGGCCATGTATACACTGGATTCACAGCTGCGGGAACAGAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR CAA 90 bp CCTTCTGTTCCCGCAGCTGTGAATCCAGTGTATACATGGCCATCCTTTTTGCTTAATGGCTCGGAGTCTTaGTGGGGTGGGGTTCCCGGC +
Preference number: 5 (lower is better)
Translates to: PSVPAAVNPVYTWPSFLLNGSES*WGGVPG
Trigger: GCCGGGAACCCCACCCCACAAAGACTCCGAGCCATT...AAGCAAAAAGGATGGCCATGTATACACTGGATTCACAGCTGCGGGAACAGAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR CAA 90 bp GAACATCCCTTCTGTTCCCGCAGCTGTGAATCCAGTGTATACATGGCCATCCTTAGCCGGATGGGGATCTaGGTTAGGCCTTGGACAGGG +
Preference number: 5 (lower is better)
Translates to: EHPFCSRSCESSVYMAILSRMGI*VRPWTG
Trigger: CCCTGTCCAAGGCCTAACCAAGATCCCCATCCGGCT...AAGGATGGCCATGTATACACTGGATTCACAGCTGCGGGAACAGAAGGGATGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR CAA 90 bp GAACATCCCTTCTGTTCCCGCAGCTGTGAATCCAGTGTATACATGGCCATCCTTATGGACGGGACCCTCTaGGGCTTCCGGAGAGTTCTC +
Preference number: 5 (lower is better)
Translates to: EHPFCSRSCESSVYMAILMDGTL*GFRRVL
Trigger: GAGAACTCTCCGGAAGCCCAAGAGGGTCCCGTCCAT...AAGGATGGCCATGTATACACTGGATTCACAGCTGCGGGAACAGAAGGGATGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR CAA 90 bp CCCTGTGTGGAGGTGAGGGAACATCCCTTCTGTTCCCGCAGCTGTGAATCCAGTAGGTGGAAGTGGAGCTaGATTAAGCCAGTGAGGTTG +
Preference number: 5 (lower is better)
Translates to: PCVEVREHPFCSRSCESSRWKWS*IKPVRL
Trigger: CAACCTCACTGGCTTAATCAAGCTCCACTTCCACCT...ACTGGATTCACAGCTGCGGGAACAGAAGGGATGTTCCCTCACCTCCACACAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR CAA 90 bp AGTGTATACATGGCCATCCTTTTTGCTTCCCTCCTACCCAACACGCTCATGTGCAGGAAGCTGCCTGGCTaGTGTGAGAGGGATGTGCAG +
Preference number: 5 (lower is better)
Translates to: SVYMAILFASLLPNTLMCRKLPG*CERDVQ
Trigger: CTGCACATCCCTCTCACACAAGCCAGGCAGCTTCCT...GCACATGAGCGTGTTGGGTAGGAGGGAAGCAAAAAGGATGGCCATGTATACACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR CAA 90 bp AGAGCAGTGGGTTGCCCCTTTGCTCAGATGAGCAGATGGAGTCTATATTTGTCTCACTCAGGCTTGCCTTaGTCCTGGGCCCACTCTGTC +
Preference number: 5 (lower is better)
Translates to: RAVGCPFAQMSRWSLYLSHSGLP*SWAHSV
Trigger: GACAGAGTGGGCCCAGGACAAAGGCAAGCCTGAGTG...AGACAAATATAGACTCCATCTGCTCATCTGAGCAAAGGGGCAACCCACTGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR CAA 90 bp GAGAGTAATGAGATACAGGATGGTCCTACTGCCCCTGGCCTACCTCTGGAGTTGTTGCTCAGACATGCCTaGGCTTTGTCAGAGTTGGGG +
Preference number: 5 (lower is better)
Translates to: ESNEIQDGPTAPGLPLELLLRHA*ALSELG
Trigger: CCCCAACTCTGACAAAGCCAAGGCATGTCTGAGCAA...CAACTCCAGAGGTAGGCCAGGGGCAGTAGGACCATCCTGTATCTCATTACTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR CAA 90 bp AGTGTATACATGGCCATCCTTTTTGCTTCCCTCCTACCCAACACGCTCATGTGCCTTGCTGATATCCCTTaGGTGGTGGCCTCAATGGCT +
Preference number: 5 (lower is better)
Translates to: SVYMAILFASLLPNTLMCLADIP*VVASMA
Trigger: AGCCATTGAGGCCACCACCAAAGGGATATCAGCAAG...GCACATGAGCGTGTTGGGTAGGAGGGAAGCAAAAAGGATGGCCATGTATACACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR CAA 90 bp CCTTCTGTTCCCGCAGCTGTGAATCCAGTGTATACATGGCCATCCTTTTTGCTTGCTACAGTAGATGGCTaGCTCCTTGTTCCCGCCCAA +
Preference number: 5 (lower is better)
Translates to: PSVPAAVNPVYTWPSFLLATVDG*LLVPAQ
Trigger: TTGGGCGGGAACAAGGAGCAAGCCATCTACTGTAGC...AAGCAAAAAGGATGGCCATGTATACACTGGATTCACAGCTGCGGGAACAGAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR CAA 90 bp GAACATCCCTTCTGTTCCCGCAGCTGTGAATCCAGTGTATACATGGCCATCCTTAGACATGCCTTGGCTTaGTCAGAGTTGGGGTCCAAG +
Preference number: 5 (lower is better)
Translates to: EHPFCSRSCESSVYMAILRHALA*SELGSK
Trigger: CTTGGACCCCAACTCTGACAAAGCCAAGGCATGTCT...AAGGATGGCCATGTATACACTGGATTCACAGCTGCGGGAACAGAAGGGATGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR CAA 90 bp CAAGGGCAGAATCACATGCATTTAATAACTTATGGGAGTTATGGAAACAGGTGGCCTTGGCACTCAGGCTaGCCTTTGTCCTGGGCCCAC +
Preference number: 5 (lower is better)
Translates to: QGQNHMHLITYGSYGNRWPWHSG*PLSWAH
Trigger: GTGGGCCCAGGACAAAGGCAAGCCTGAGTGCCAAGG...CCACCTGTTTCCATAACTCCCATAAGTTATTAAATGCATGTGATTCTGCCCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR CAA 90 bp AGCTGTGAATCCAGTGTATACATGGCCATCCTTTTTGCTTCCCTCCTACCCAACTTCCCCTCAGACACTTaGACCATGGAGAACTGCACT +
Preference number: 5 (lower is better)
Translates to: SCESSVYMAILFASLLPNFPSDT*TMENCT
Trigger: AGTGCAGTTCTCCATGGTCAAAGTGTCTGAGGGGAA...GTTGGGTAGGAGGGAAGCAAAAAGGATGGCCATGTATACACTGGATTCACAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS-3UTR CAA 90 bp AGAGCAGTGGGTTGCCCCTTTGCTCAGATGAGCAGATGGAGTCTATATTTGTCTAGATGGAGTCTATATTaGTCTTCTGACCCACTCCTG +
Preference number: 5 (lower is better)
Translates to: RAVGCPFAQMSRWSLYLSRWSLY*SSDPLL
Trigger: CAGGAGTGGGTCAGAAGACAAATATAGACTCCATCT...AGACAAATATAGACTCCATCTGCTCATCTGAGCAAAGGGGCAACCCACTGCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS TCA 72 bp CAGGTGCCTCAGCCAGGAAGGCCAGGGCAGCGTCAGTaGCAACGTTGGCGTGTTGGCACAGCACCAGGCCCG +
Preference number: 6 (lower is better)
Translates to: QVPQPGRPGQRQ*QRWRVGTAPGP
Trigger: CGGGCCTGGTGCTGTGCCAACACGCCAACGTTGTCACTGACGCTGCCCTGGCCTTCCTGGCTGAGGCACCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS CCA 72 bp AAGGCCAGGGCAGCGTCAGTGACAACGTTGGCGTGTTaGCACAGCACCAGGCCCGTTTCCAGCACCTGCAGG +
Preference number: 6 (lower is better)
Translates to: KARAASVTTLAC*HSTRPVSSTCR
Trigger: CCTGCAGGTGCTGGAAACGGGCCTGGTGCTGTGCCAACACGCCAACGTTGTCACTGACGCTGCCCTGGCCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS CAA 72 bp GAAGGCCAGGGCAGCGTCAGTGACAACGTTGGCGTGTaGGCACAGCACCAGGCCCGTTTCCAGCACCTGCAG +
Preference number: 6 (lower is better)
Translates to: EGQGSVSDNVGV*AQHQARFQHLQ
Trigger: CTGCAGGTGCTGGAAACGGGCCTGGTGCTGTGCCAACACGCCAACGTTGTCACTGACGCTGCCCTGGCCTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS CAA 90 bp CTCAGCCAGGAAGGCCAGGGCAGCGTCAGTGACAACGTTGGCGTGTaGGCACAGCACCAGGCCCGTTTCCAGCACCTGCAGGAAGTTGGC +
Preference number: 6 (lower is better)
Translates to: LSQEGQGSVSDNVGV*AQHQARFQHLQEVG
Trigger: GCCAACTTCCTGCAGGTGCTGGAAACGGGCCTGGTGCTGTGCCAACACGCCAACGTTGTCACTGACGCTGCCCTGGCCTTCCTGGCTGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS GCA 72 bp TTCCCTGGTGGCCCTGCAGCAACCTTGCTCTCAGGCTaGCCAGTCCACTTGGAGTTCACCCCTCTGAGGCCA +
Preference number: 6 (lower is better)
Translates to: FPGGPAATLLSG*PVHLEFTPLRP
Trigger: TGGCCTCAGAGGGGTGAACTCCAAGTGGACTGGGCAGCCTGAGAGCAAGGTTGCTGCAGGGCCACCAGGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS CCA 72 bp GCCGCCTCTTTCCTCCCGCTGCTGCTGGGTCTCGGCTaGGTTCTTCCTGATTCTGAGGTTCCCGTGTACTCG +
Preference number: 6 (lower is better)
Translates to: AASFLPLLLGLG*VLPDSEVPVYS
Trigger: CGAGTACACGGGAACCTCAGAATCAGGAAGAACCCAGCCGAGACCCAGCAGCAGCGGGAGGAAAGAGGCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS CCA 72 bp ACAGCACCAGGCCCGTTTCCAGCACCTGCAGGAAGTTaGCTGCGTCGATGTCCAGCCCATAGAGGTCGCGAA +
Preference number: 6 (lower is better)
Translates to: TAPGPFPAPAGS*LRRCPAHRGRE
Trigger: TTCGCGACCTCTATGGGCTGGACATCGACGCAGCCAACTTCCTGCAGGTGCTGGAAACGGGCCTGGTGCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS TCA 72 bp GGGTTCTTCCTGATTCTGAGGTTCCCGTGTACTCGCTaGGAGCCCGGGACCTCCAGTGCTGCTACTTGCCAC +
Preference number: 6 (lower is better)
Translates to: GFFLILRFPCTR*EPGTSSAATCH
Trigger: GTGGCAAGTAGCAGCACTGGAGGTCCCGGGCTCTCAGCGAGTACACGGGAACCTCAGAATCAGGAAGAACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS GCA 72 bp TTCCTCAGTCCTTGCCAGAGCTTTCCCTGGTGGCCCTaGAGCAACCTTGCTCTCAGGCTGCCCAGTCCACTT +
Preference number: 6 (lower is better)
Translates to: FLSPCQSFPWWP*SNLALRLPSPL
Trigger: AAGTGGACTGGGCAGCCTGAGAGCAAGGTTGCTGCAGGGCCACCAGGGAAAGCTCTGGCAAGGACTGAGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS CCA 72 bp CACCACTGGATGAAGTTAGAGACATTGTCCCTGGCCTaGAAGGTACCTGGCTGGGCGGCCCCATTGCAGGAG +
Preference number: 6 (lower is better)
Translates to: HHWMKLETLSLA*KVPGWAAPLQE
Trigger: CTCCTGCAATGGGGCCGCCCAGCCAGGTACCTTCCAGGCCAGGGACAATGTCTCTAACTTCATCCAGTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS CCA 72 bp CTTCCCCTCAGACACTTTGACCATGGAGAACTGCACTaGGCACGTGCAGTGGCTCACAAGGCTCTGCACCAT +
Preference number: 6 (lower is better)
Translates to: LPLRHFDHGELH*ARAVAHKALHH
Trigger: ATGGTGCAGAGCCTTGTGAGCCACTGCACGTGCCCAGTGCAGTTCTCCATGGTCAAAGTGTCTGAGGGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS GCA 72 bp ATCCTTTTTGCTTCCCTCCTACCCAACACGCTCATGTaGCTCAGACCCAGGACTCCTCCTCAGGTGGAAGTG +
Preference number: 6 (lower is better)
Translates to: ILFASLLPNTLM*LRPRTPPQVEV
Trigger: CACTTCCACCTGAGGAGGAGTCCTGGGTCTGAGGCACATGAGCGTGTTGGGTAGGAGGGAAGCAAAAAGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS CAA 90 bp TCTGTTCCCGCAGCTGTGAATCCAGTGTATACATGGCCATCCTTTTaGCTTCCCTCCTACCCAACACGCTCATGTGCCTCAGACCCAGGA +
Preference number: 6 (lower is better)
Translates to: SVPAAVNPVYTWPSF*LPSYPTRSCASDPG
Trigger: TCCTGGGTCTGAGGCACATGAGCGTGTTGGGTAGGAGGGAAGCAAAAAGGATGGCCATGTATACACTGGATTCACAGCTGCGGGAACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS CCA 72 bp AGCACCTCTTGGATGCCCATCTCCTTTCGACACCACTaGATGAAGTTAGAGACATTGTCCCTGGCCTGGAAG +
Preference number: 6 (lower is better)
Translates to: STSWMPISFRHH*MKLETLSLAWK
Trigger: CTTCCAGGCCAGGGACAATGTCTCTAACTTCATCCAGTGGTGTCGAAAGGAGATGGGCATCCAAGAGGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604641.6
CDS CAA 72 bp GCAGCTGTGAATCCAGTGTATACATGGCCATCCTTTTaGCTTCCCTCCTACCCAACACGCTCATGTGCCTCA +
Preference number: 6 (lower is better)
Translates to: AAVNPVYTWPSF*LPSYPTRSCAS
Trigger: TGAGGCACATGAGCGTGTTGGGTAGGAGGGAAGCAAAAAGGATGGCCATGTATACACTGGATTCACAGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604641.6