RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GAS2 (Homo sapiens)

Ensembl gene IDs: ENSG00000148935

Ensembl transcript IDs: ENST00000278187.7, ENST00000454584.6, ENST00000524701.5, ENST00000526665.1, ENST00000528582.5, ENST00000532398.1, ENST00000533092.1, ENST00000533363.5, ENST00000534801.5, ENST00000630668.2, ENST00000648096.1

Found 223 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CACTCGGTATCTTCCTTGGGAGAGCCGCTCCACACAGAACTTGTTTaGGCATTTGCAAGGAGGATCTTCAGAAATTCGTTTCACTGCATC +
Preference number: 1 (lower is better)
Translates to: HSVSSLGEPLHTELV*AFARRIFRNSFHCI
Trigger: GATGCAGTGAAACGAATTTCTGAAGATCCTCCTTGCAAATGCCCAAACAAGTTCTGTGTGGAGCGGCTCTCCCAAGGAAGATACCGAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524701.5
3UTR GCA 90 bp ATCTTCCTTGGGAGAGCCGCTCCACACAGAACTTGTTTGGGCATTTaGAAGGAGGATCTTCAGAAATTCGTTTCACTGCATCATCCAGTA +
Preference number: 1 (lower is better)
Translates to: IFLGRAAPHRTCLGI*KEDLQKFVSLHHPV
Trigger: TACTGGATGATGCAGTGAAACGAATTTCTGAAGATCCTCCTTGCAAATGCCCAAACAAGTTCTGTGTGGAGCGGCTCTCCCAAGGAAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524701.5
3UTR CAA 90 bp TTCATGTCCTTTAGAGTTGGAGATTTGCTTTGGATAGGGGATGTTTaGCCATCCACACGGGAGATCTGCAGCATTCGGCAGGGGTCGTGT +
Preference number: 2 (lower is better)
Translates to: FMSFRVGDLLWIGDV*PSTREICSIRQGSC
Trigger: ACACGACCCCTGCCGAATGCTGCAGATCTCCCGTGTGGATGGCAAAACATCCCCTATCCAAAGCAAATCTCCAACTCTAAAGGACATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524701.5
3UTR CAA 90 bp CCACTCGGTATCTTCCTTGGGAGAGCCGCTCCACACAGAACTTGTTaGGGCATTTGCAAGGAGGATCTTCAGAAATTCGTTTCACTGCAT +
Preference number: 2 (lower is better)
Translates to: PLGIFLGRAAPHRTC*GICKEDLQKFVSLH
Trigger: ATGCAGTGAAACGAATTTCTGAAGATCCTCCTTGCAAATGCCCAAACAAGTTCTGTGTGGAGCGGCTCTCCCAAGGAAGATACCGAGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524701.5
3UTR CAA 90 bp TCTCCCACTCGGTATCTTCCTTGGGAGAGCCGCTCCACACAGAACTaGTTTGGGCATTTGCAAGGAGGATCTTCAGAAATTCGTTTCACT +
Preference number: 2 (lower is better)
Translates to: SPTRYLPWESRSTQN*FGHLQGGSSEIRFT
Trigger: AGTGAAACGAATTTCTGAAGATCCTCCTTGCAAATGCCCAAACAAGTTCTGTGTGGAGCGGCTCTCCCAAGGAAGATACCGAGTGGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524701.5
3UTR-3UTR CCA 90 bp TCTTCCTTGGGAGAGCCGCTCCACACAGAACTTGTTTGGGCATTTGCAAGGAGGACTATACTGGAGAAGTaGATACAGGCCATTATGAGG +
Preference number: 2 (lower is better)
Translates to: SSLGEPLHTELVWAFARRTILEK*IQAIMR
Trigger: CCTCATAATGGCCTGTATCCACTTCTCCAGTATAGT...CCTCCTTGCAAATGCCCAAACAAGTTCTGTGTGGAGCGGCTCTCCCAAGGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524701.5
3UTR-3UTR CCA 90 bp TTGGGCATTTGCAAGGAGGATCTTCAGAAATTCGTTTCACTGCATCATCCAGTAGCTCCACACCATACCTaGCTGCAATCCGGCCAAGCT +
Preference number: 2 (lower is better)
Translates to: LGICKEDLQKFVSLHHPVAPHHT*LQSGQA
Trigger: AGCTTGGCCGGATTGCAGCCAGGTATGGTGTGGAGC...TACTGGATGATGCAGTGAAACGAATTTCTGAAGATCCTCCTTGCAAATGCCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524701.5
3UTR-3UTR TCA 90 bp GCCCTGTCCCAGGTATACAAGGGTATACGTAAGTCTGTAACATCATTAGCTACAGGATACAGGCCATTATaGGGGTCCCCTTGTCATGAC +
Preference number: 2 (lower is better)
Translates to: ALSQVYKGIRKSVTSLATGYRPL*GSPCHD
Trigger: GTCATGACAAGGGGACCCTCATAATGGCCTGTATCC...TGTAGCTAATGATGTTACAGACTTACGTATACCCTTGTATACCTGGGACAGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278187.7
ENST00000454584.6
ENST00000524701.5
3UTR CAA 90 bp TATCTTCCTTGGGAGAGCCGCTCCACACAGAACTTGTTTGGGCATTaGCAAGGAGGATCTTCAGAAATTCGTTTCACTGCATCATCCAGT +
Preference number: 2 (lower is better)
Translates to: YLPWESRSTQNLFGH*QGGSSEIRFTASSS
Trigger: ACTGGATGATGCAGTGAAACGAATTTCTGAAGATCCTCCTTGCAAATGCCCAAACAAGTTCTGTGTGGAGCGGCTCTCCCAAGGAAGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524701.5
3UTR-3UTR CCA 90 bp GGCAGCCTTCCAAGTGAATGTAAACTTTTCGGAAGTGGCCTTTCCAGTAACATAAGAGACACACTTCTCTaGGTTGCTTGTGGAGGACCT +
Preference number: 2 (lower is better)
Translates to: GSLPSECKLFGSGLSSNIRDTLL*VACGGP
Trigger: AGGTCCTCCACAAGCAACCCAGAGAAGTGTGTCTCT...TATGTTACTGGAAAGGCCACTTCCGAAAAGTTTACATTCACTTGGAAGGCTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524701.5
3UTR-3UTR CCA 90 bp CCAAGTGAATGTAAACTTTTCGGAAGTGGCCTTTCCAGTAACATATTACTATTGACTCGGTATCTTCCTTaGGAGAGCCGCTCCACACAG +
Preference number: 2 (lower is better)
Translates to: PSECKLFGSGLSSNILLLTRYLP*ESRSTQ
Trigger: CTGTGTGGAGCGGCTCTCCCAAGGAAGATACCGAGT...CAATAGTAATATGTTACTGGAAAGGCCACTTCCGAAAAGTTTACATTCACTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524701.5
3UTR-3UTR TCA 90 bp GGCAGCCTTCCAAGTGAATGTAAACTTTTCGGAAGTGGCCTTTCCAGTAACATATCTAAGGGGGTGTACTaGAAACTTCTAAAAGTACCC +
Preference number: 2 (lower is better)
Translates to: GSLPSECKLFGSGLSSNISKGVY*KLLKVP
Trigger: GGGTACTTTTAGAAGTTTTCAGTACACCCCCTTAGA...TATGTTACTGGAAAGGCCACTTCCGAAAAGTTTACATTCACTTGGAAGGCTGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000278187.7
ENST00000454584.6
ENST00000524701.5
3UTR-3UTR TCA 90 bp CTGTACAATTTACTCGTCAAAGTATCAACGTATGTCAGCTCATGTATGAATTACGGATACAGGCCATTATaGGGGTCCCCTTGTCATGAC +
Preference number: 2 (lower is better)
Translates to: LYNLLVKVSTYVSSCMNYGYRPL*GSPCHD
Trigger: GTCATGACAAGGGGACCCTCATAATGGCCTGTATCC...GTAATTCATACATGAGCTGACATACGTTGATACTTTGACGAGTAAATTGTACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278187.7
ENST00000454584.6
ENST00000524701.5
3UTR-3UTR TCA 90 bp GTAAACTTTTCGGAAGTGGCCTTTCCAGTAACATATTACTATTGTGAATACTCTGGATACAGGCCATTATaGGGGTCCCCTTGTCATGAC +
Preference number: 2 (lower is better)
Translates to: VNFSEVAFPVTYYYCEYSGYRPL*GSPCHD
Trigger: GTCATGACAAGGGGACCCTCATAATGGCCTGTATCC...AGAGTATTCACAATAGTAATATGTTACTGGAAAGGCCACTTCCGAAAAGTTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000278187.7
ENST00000454584.6
ENST00000524701.5
3UTR-3UTR GCA 90 bp AACTTTTCGGAAGTGGCCTTTCCAGTAACATATTACTATTGTGAATACTCTGTACACACTTCTCTGGGTTaGTTGTGGAGGACCTTTTCT +
Preference number: 2 (lower is better)
Translates to: NFSEVAFPVTYYYCEYSVHTSLG*LWRTFS
Trigger: AGAAAAGGTCCTCCACAAGCAACCCAGAGAAGTGTG...TACAGAGTATTCACAATAGTAATATGTTACTGGAAAGGCCACTTCCGAAAAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524701.5
3UTR-3UTR CCA 90 bp AGCCTTCCAAGTGAATGTAAACTTTTCGGAAGTGGCCTTTCCAGTAACATATTAACTATACTGGAGAAGTaGATACAGGCCATTATGAGG +
Preference number: 2 (lower is better)
Translates to: SLPSECKLFGSGLSSNILTILEK*IQAIMR
Trigger: CCTCATAATGGCCTGTATCCACTTCTCCAGTATAGT...TAATATGTTACTGGAAAGGCCACTTCCGAAAAGTTTACATTCACTTGGAAGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278187.7
ENST00000454584.6
ENST00000524701.5
3UTR-3UTR CCA 90 bp GGCAGCCTTCCAAGTGAATGTAAACTTTTCGGAAGTGGCCTTTCCAGTAACATATATTTTGCTGTTTATTaGTATAAAACAGCCCTGTCC +
Preference number: 2 (lower is better)
Translates to: GSLPSECKLFGSGLSSNIYFAVY*YKTALS
Trigger: GGACAGGGCTGTTTTATACCAATAAACAGCAAAATA...TATGTTACTGGAAAGGCCACTTCCGAAAAGTTTACATTCACTTGGAAGGCTGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000278187.7
ENST00000454584.6
ENST00000524701.5
3UTR-3UTR GCA 90 bp CCAAGTGAATGTAAACTTTTCGGAAGTGGCCTTTCCAGTAACATATTACTATTGACTTGTTTGGGCATTTaGAAGGAGGATCTTCAGAAA +
Preference number: 2 (lower is better)
Translates to: PSECKLFGSGLSSNILLLTCLGI*KEDLQK
Trigger: TTTCTGAAGATCCTCCTTGCAAATGCCCAAACAAGT...CAATAGTAATATGTTACTGGAAAGGCCACTTCCGAAAAGTTTACATTCACTTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524701.5
3UTR-3UTR GCA 90 bp CCAAGTGAATGTAAACTTTTCGGAAGTGGCCTTTCCAGTAACATATTACTATTGATGACATGTTTGTTGTaGAGCATCCTAATGAAGAGG +
Preference number: 2 (lower is better)
Translates to: PSECKLFGSGLSSNILLLMTCLL*SILMKR
Trigger: CCTCTTCATTAGGATGCTGCACAACAAACATGTCAT...CAATAGTAATATGTTACTGGAAAGGCCACTTCCGAAAAGTTTACATTCACTTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524701.5
3UTR-3UTR CCA 90 bp GTGAATGTAAACTTTTCGGAAGTGGCCTTTCCAGTAACATATTACTATTGTGAAACTATACTGGAGAAGTaGATACAGGCCATTATGAGG +
Preference number: 2 (lower is better)
Translates to: VNVNFSEVAFPVTYYYCETILEK*IQAIMR
Trigger: CCTCATAATGGCCTGTATCCACTTCTCCAGTATAGT...TTCACAATAGTAATATGTTACTGGAAAGGCCACTTCCGAAAAGTTTACATTCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278187.7
ENST00000454584.6
ENST00000524701.5
3UTR-3UTR TCA 90 bp CCAAGTGAATGTAAACTTTTCGGAAGTGGCCTTTCCAGTAACATATTACTATTGACATATGAACTAAACTaGCTATACTGGAGAAGTGGA +
Preference number: 2 (lower is better)
Translates to: PSECKLFGSGLSSNILLLTYELN*LYWRSG
Trigger: TCCACTTCTCCAGTATAGTCAGTTTAGTTCATATGT...CAATAGTAATATGTTACTGGAAAGGCCACTTCCGAAAAGTTTACATTCACTTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278187.7
ENST00000454584.6
ENST00000524701.5
3UTR-3UTR TCA 90 bp GTGAATGTAAACTTTTCGGAAGTGGCCTTTCCAGTAACATATTACTATTGTGAAACATATGAACTAAACTaGCTATACTGGAGAAGTGGA +
Preference number: 2 (lower is better)
Translates to: VNVNFSEVAFPVTYYYCETYELN*LYWRSG
Trigger: TCCACTTCTCCAGTATAGTCAGTTTAGTTCATATGT...TTCACAATAGTAATATGTTACTGGAAAGGCCACTTCCGAAAAGTTTACATTCAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278187.7
ENST00000454584.6
ENST00000524701.5
3UTR-3UTR CCA 90 bp GTGAATGTAAACTTTTCGGAAGTGGCCTTTCCAGTAACATATTACTATTGTGAATATTTTGCTGTTTATTaGTATAAAACAGCCCTGTCC +
Preference number: 2 (lower is better)
Translates to: VNVNFSEVAFPVTYYYCEYFAVY*YKTALS
Trigger: GGACAGGGCTGTTTTATACCAATAAACAGCAAAATA...TTCACAATAGTAATATGTTACTGGAAAGGCCACTTCCGAAAAGTTTACATTCAC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000278187.7
ENST00000454584.6
ENST00000524701.5
3UTR-3UTR CAA 90 bp TGGGAGAGCCGCTCCACACAGAACTTGTTTGGGCATTTGCAAGGAGGATCTTCAACACACTTCTCTGGGTaGCTTGTGGAGGACCTTTTC +
Preference number: 3 (lower is better)
Translates to: WESRSTQNLFGHLQGGSSTHFSG*LVEDLF
Trigger: GAAAAGGTCCTCCACAAGCAACCCAGAGAAGTGTGT...TGAAGATCCTCCTTGCAAATGCCCAAACAAGTTCTGTGTGGAGCGGCTCTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524701.5
3UTR GCA 72 bp GGGAGAGCCGCTCCACACAGAACTTGTTTGGGCATTTaGAAGGAGGATCTTCAGAAATTCGTTTCACTGCAT +
Preference number: 3 (lower is better)
Translates to: GRAAPHRTCLGI*KEDLQKFVSLH
Trigger: ATGCAGTGAAACGAATTTCTGAAGATCCTCCTTGCAAATGCCCAAACAAGTTCTGTGTGGAGCGGCTCTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524701.5
3UTR CCA 72 bp TCTTCCTTGGGAGAGCCGCTCCACACAGAACTTGTTTaGGCATTTGCAAGGAGGATCTTCAGAAATTCGTTT +
Preference number: 3 (lower is better)
Translates to: SSLGEPLHTELV*AFARRIFRNSF
Trigger: AAACGAATTTCTGAAGATCCTCCTTGCAAATGCCCAAACAAGTTCTGTGTGGAGCGGCTCTCCCAAGGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524701.5
3UTR CCA 72 bp TCTGGATTCATGTCCTTTAGAGTTGGAGATTTGCTTTaGATAGGGGATGTTTTGCCATCCACACGGGAGATC +
Preference number: 3 (lower is better)
Translates to: SGFMSFRVGDLL*IGDVLPSTREI
Trigger: GATCTCCCGTGTGGATGGCAAAACATCCCCTATCCAAAGCAAATCTCCAACTCTAAAGGACATGAATCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524701.5
3UTR-3UTR CAA 90 bp ACAGAACTTGTTTGGGCATTTGCAAGGAGGATCTTCAGAAATTCGTTTCACTGCACTTCTCTGGGTTGCTaGTGGAGGACCTTTTCTTGT +
Preference number: 3 (lower is better)
Translates to: TELVWAFARRIFRNSFHCTSLGC*WRTFSC
Trigger: ACAAGAAAAGGTCCTCCACAAGCAACCCAGAGAAGT...GCAGTGAAACGAATTTCTGAAGATCCTCCTTGCAAATGCCCAAACAAGTTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524701.5
3UTR-3UTR CAA 90 bp AGCCTTCCAAGTGAATGTAAACTTTTCGGAAGTGGCCTTTCCAGTAACATATTACGCTCCACACAGAACTaGTTTGGGCATTTGCAAGGA +
Preference number: 3 (lower is better)
Translates to: SLPSECKLFGSGLSSNILRSTQN*FGHLQG
Trigger: TCCTTGCAAATGCCCAAACAAGTTCTGTGTGGAGCG...TAATATGTTACTGGAAAGGCCACTTCCGAAAAGTTTACATTCACTTGGAAGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524701.5
3UTR-3UTR CAA 90 bp AGCCTTCCAAGTGAATGTAAACTTTTCGGAAGTGGCCTTTCCAGTAACATATTACGGACCATGACATGTTaGTTGTGCAGCATCCTAATG +
Preference number: 3 (lower is better)
Translates to: SLPSECKLFGSGLSSNILRTMTC*LCSILM
Trigger: CATTAGGATGCTGCACAACAAACATGTCATGGTCCG...TAATATGTTACTGGAAAGGCCACTTCCGAAAAGTTTACATTCACTTGGAAGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524701.5
3UTR-3UTR CAA 90 bp CCAAGTGAATGTAAACTTTTCGGAAGTGGCCTTTCCAGTAACATATTACTATTGCCACACAGAACTTGTTaGGGCATTTGCAAGGAGGAT +
Preference number: 3 (lower is better)
Translates to: PSECKLFGSGLSSNILLLPHRTC*GICKED
Trigger: ATCCTCCTTGCAAATGCCCAAACAAGTTCTGTGTGG...CAATAGTAATATGTTACTGGAAAGGCCACTTCCGAAAAGTTTACATTCACTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524701.5
3UTR-3UTR CAA 90 bp AGCCTTCCAAGTGAATGTAAACTTTTCGGAAGTGGCCTTTCCAGTAACATATTAAGCAGGCACTTTCTGTaGACTTATCTGCAAATCCTA +
Preference number: 3 (lower is better)
Translates to: SLPSECKLFGSGLSSNILSRHFL*TYLQIL
Trigger: TAGGATTTGCAGATAAGTCAACAGAAAGTGCCTGCT...TAATATGTTACTGGAAAGGCCACTTCCGAAAAGTTTACATTCACTTGGAAGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278187.7
ENST00000454584.6
ENST00000524701.5
3UTR-3UTR CAA 90 bp CCAAGTGAATGTAAACTTTTCGGAAGTGGCCTTTCCAGTAACATATTACTATTGAGCAGGCACTTTCTGTaGACTTATCTGCAAATCCTA +
Preference number: 3 (lower is better)
Translates to: PSECKLFGSGLSSNILLLSRHFL*TYLQIL
Trigger: TAGGATTTGCAGATAAGTCAACAGAAAGTGCCTGCT...CAATAGTAATATGTTACTGGAAAGGCCACTTCCGAAAAGTTTACATTCACTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278187.7
ENST00000454584.6
ENST00000524701.5
3UTR-3UTR CAA 90 bp CCAAGTGAATGTAAACTTTTCGGAAGTGGCCTTTCCAGTAACATATTACTATTGACCATGACATGTTTGTaGTGCAGCATCCTAATGAAG +
Preference number: 3 (lower is better)
Translates to: PSECKLFGSGLSSNILLLTMTCL*CSILMK
Trigger: CTTCATTAGGATGCTGCACAACAAACATGTCATGGT...CAATAGTAATATGTTACTGGAAAGGCCACTTCCGAAAAGTTTACATTCACTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524701.5
3UTR-3UTR CAA 90 bp CTGTACAATTTACTCGTCAAAGTATCAACGTATGTCAGCTCATGTATGAATTACAGCAGGCACTTTCTGTaGACTTATCTGCAAATCCTA +
Preference number: 3 (lower is better)
Translates to: LYNLLVKVSTYVSSCMNYSRHFL*TYLQIL
Trigger: TAGGATTTGCAGATAAGTCAACAGAAAGTGCCTGCT...GTAATTCATACATGAGCTGACATACGTTGATACTTTGACGAGTAAATTGTACAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278187.7
ENST00000454584.6
ENST00000524701.5
3UTR-3UTR CAA 90 bp AGCCTTCCAAGTGAATGTAAACTTTTCGGAAGTGGCCTTTCCAGTAACATATTAGCTGTTGGATATTTTTaGCAGCACATTATCACACTA +
Preference number: 3 (lower is better)
Translates to: SLPSECKLFGSGLSSNILAVGYF*QHIITL
Trigger: TAGTGTGATAATGTGCTGCAAAAAATATCCAACAGC...TAATATGTTACTGGAAAGGCCACTTCCGAAAAGTTTACATTCACTTGGAAGGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000278187.7
ENST00000454584.6
ENST00000524701.5
3UTR-3UTR CAA 90 bp AACTTTTCGGAAGTGGCCTTTCCAGTAACATATTACTATTGTGAATACTCTGTAGCTGTTGGATATTTTTaGCAGCACATTATCACACTA +
Preference number: 3 (lower is better)
Translates to: NFSEVAFPVTYYYCEYSVAVGYF*QHIITL
Trigger: TAGTGTGATAATGTGCTGCAAAAAATATCCAACAGC...TACAGAGTATTCACAATAGTAATATGTTACTGGAAAGGCCACTTCCGAAAAGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000278187.7
ENST00000454584.6
ENST00000524701.5
CDS-3UTR CCA 90 bp GCCCTGTCCCAGGTATACAAGGGTATACGTAAGTCTGTAACATCATTAGCTACAGCTTGGGCTCCGGGCTaGGCTCCTGCAGCTTCTCGG +
Preference number: 4 (lower is better)
Translates to: ALSQVYKGIRKSVTSLATAWAPG*APAASR
Trigger: CCGAGAAGCTGCAGGAGCCCAGCCCGGAGCCCAAGC...TGTAGCTAATGATGTTACAGACTTACGTATACCCTTGTATACCTGGGACAGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454584.6
CDS-3UTR CCA 90 bp GGCAGCCTTCCAAGTGAATGTAAACTTTTCGGAAGTGGCCTTTCCAGTAACATACCCGAGCTGGGCTGCTaGCGGCTCTCAGAGGCGCTT +
Preference number: 4 (lower is better)
Translates to: GSLPSECKLFGSGLSSNIPELGC*RLSEAL
Trigger: AAGCGCCTCTGAGAGCCGCCAGCAGCCCAGCTCGGG...TATGTTACTGGAAAGGCCACTTCCGAAAAGTTTACATTCACTTGGAAGGCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454584.6
CDS-3UTR CCA 90 bp GTTGGAGATTTGCTTTGGATAGGGGATGTTTTGCCATCCACACGGGAGATCTGCGCTCCACACCATACCTaGCTGCAATCCGGCCAAGCT +
Preference number: 4 (lower is better)
Translates to: VGDLLWIGDVLPSTREICAPHHT*LQSGQA
Trigger: AGCTTGGCCGGATTGCAGCCAGGTATGGTGTGGAGC...GCAGATCTCCCGTGTGGATGGCAAAACATCCCCTATCCAAAGCAAATCTCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524701.5
CDS-3UTR TCA 90 bp GCAGACAGAGACACACTTCTCTGGGTTGCTTGTGGAGGACCTTTTCTTGTTGAGGGATACAGGCCATTATaGGGGTCCCCTTGTCATGAC +
Preference number: 4 (lower is better)
Translates to: ADRDTLLWVACGGPFLVEGYRPL*GSPCHD
Trigger: GTCATGACAAGGGGACCCTCATAATGGCCTGTATCC...CTCAACAAGAAAAGGTCCTCCACAAGCAACCCAGAGAAGTGTGTCTCTGTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524701.5
CDS-3UTR GCA 90 bp AGCCTTCCAAGTGAATGTAAACTTTTCGGAAGTGGCCTTTCCAGTAACATATTATCCAGGCACAGGTCCTaGAGCAGCCGCTCCCCGCAC +
Preference number: 4 (lower is better)
Translates to: SLPSECKLFGSGLSSNILSRHRS*SSRSPH
Trigger: GTGCGGGGAGCGGCTGCTGCAGGACCTGTGCCTGGA...TAATATGTTACTGGAAAGGCCACTTCCGAAAAGTTTACATTCACTTGGAAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454584.6
CDS-3UTR GCA 90 bp CCAAGTGAATGTAAACTTTTCGGAAGTGGCCTTTCCAGTAACATATTACTATTGCGTCCCGAGCTGGGCTaGTGGCGGCTCTCAGAGGCG +
Preference number: 4 (lower is better)
Translates to: PSECKLFGSGLSSNILLLRPELG*WRLSEA
Trigger: CGCCTCTGAGAGCCGCCAGCAGCCCAGCTCGGGACG...CAATAGTAATATGTTACTGGAAAGGCCACTTCCGAAAAGTTTACATTCACTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454584.6
CDS-3UTR GCA 90 bp TCTTCCTTGGGAGAGCCGCTCCACACAGAACTTGTTTGGGCATTTGCAAGGAGGCACACTTCTCTGGGTTaGTTGTGGAGGACCTTTTCT +
Preference number: 4 (lower is better)
Translates to: SSLGEPLHTELVWAFARRHTSLG*LWRTFS
Trigger: AGAAAAGGTCCTCCACAAGCAACCCAGAGAAGTGTG...CCTCCTTGCAAATGCCCAAACAAGTTCTGTGTGGAGCGGCTCTCCCAAGGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524701.5
CDS-3UTR GCA 90 bp GGCAGCCTTCCAAGTGAATGTAAACTTTTCGGAAGTGGCCTTTCCAGTAACATAAGAGGCCAGGTCCACTaGGTACCTTTGGGCTCAGAG +
Preference number: 4 (lower is better)
Translates to: GSLPSECKLFGSGLSSNIRGQVH*VPLGSE
Trigger: CTCTGAGCCCAAAGGTACGCAGTGGACCTGGCCTCT...TATGTTACTGGAAAGGCCACTTCCGAAAAGTTTACATTCACTTGGAAGGCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278187.7
ENST00000454584.6
ENST00000524701.5
CDS-3UTR GCA 90 bp CCTTATAACTGGCAGAGACCACCAAGTAGTTATCTGGATTCATGTCCTTTAGAGTCCACACGGGAGATCTaGAGCATTCGGCAGGGGTCG +
Preference number: 4 (lower is better)
Translates to: PYNWQRPPSSYLDSCPLESTREI*SIRQGS
Trigger: CGACCCCTGCCGAATGCTGCAGATCTCCCGTGTGGA...CTCTAAAGGACATGAATCCAGATAACTACTTGGTGGTCTCTGCCAGTTATAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524701.5
CDS-3UTR CCA 90 bp GCCCTGTCCCAGGTATACAAGGGTATACGTAAGTCTGTAACATCATTAGCTACAGCTCCACACCATACCTaGCTGCAATCCGGCCAAGCT +
Preference number: 4 (lower is better)
Translates to: ALSQVYKGIRKSVTSLATAPHHT*LQSGQA
Trigger: AGCTTGGCCGGATTGCAGCCAGGTATGGTGTGGAGC...TGTAGCTAATGATGTTACAGACTTACGTATACCCTTGTATACCTGGGACAGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278187.7
ENST00000454584.6
ENST00000524701.5
CDS-3UTR CCA 90 bp CCAAGTGAATGTAAACTTTTCGGAAGTGGCCTTTCCAGTAACATATTACTATTGGCTCTCAGAGGCGCTTaGGCTCCGGGCTGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: PSECKLFGSGLSSNILLLALRGA*APGWAP
Trigger: AGGAGCCCAGCCCGGAGCCCAAGCGCCTCTGAGAGC...CAATAGTAATATGTTACTGGAAAGGCCACTTCCGAAAAGTTTACATTCACTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454584.6
CDS-3UTR CCA 90 bp GTTGGAGATTTGCTTTGGATAGGGGATGTTTTGCCATCCACACGGGAGATCTGCAGAGACACACTTCTCTaGGTTGCTTGTGGAGGACCT +
Preference number: 4 (lower is better)
Translates to: VGDLLWIGDVLPSTREICRDTLL*VACGGP
Trigger: AGGTCCTCCACAAGCAACCCAGAGAAGTGTGTCTCT...GCAGATCTCCCGTGTGGATGGCAAAACATCCCCTATCCAAAGCAAATCTCCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524701.5
3UTR CAA 72 bp AATGAAGAGGATCTTTTCTCCCACTCGGTATCTTCCTaGGGAGAGCCGCTCCACACAGAACTTGTTTGGGCA +
Preference number: 4 (lower is better)
Translates to: NEEDLFSHSVSS*GEPLHTELVWA
Trigger: TGCCCAAACAAGTTCTGTGTGGAGCGGCTCTCCCAAGGAAGATACCGAGTGGGAGAAAAGATCCTCTTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524701.5
CDS-3UTR GCA 90 bp CCTTATAACTGGCAGAGACCACCAAGTAGTTATCTGGATTCATGTCCTTTAGAGAGAGGCCAGGTCCACTaGGTACCTTTGGGCTCAGAG +
Preference number: 4 (lower is better)
Translates to: PYNWQRPPSSYLDSCPLERGQVH*VPLGSE
Trigger: CTCTGAGCCCAAAGGTACGCAGTGGACCTGGCCTCT...CTCTAAAGGACATGAATCCAGATAACTACTTGGTGGTCTCTGCCAGTTATAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524701.5
CDS-3UTR CCA 90 bp TGGGAGAGCCGCTCCACACAGAACTTGTTTGGGCATTTGCAAGGAGGATCTTCACACACAGAACTTGTTTaGGCATTTGCAAGGAGGATC +
Preference number: 4 (lower is better)
Translates to: WESRSTQNLFGHLQGGSSHTELV*AFARRI
Trigger: GATCCTCCTTGCAAATGCCCAAACAAGTTCTGTGTG...TGAAGATCCTCCTTGCAAATGCCCAAACAAGTTCTGTGTGGAGCGGCTCTCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524701.5
CDS-3UTR CCA 90 bp GGCAGCCTTCCAAGTGAATGTAAACTTTTCGGAAGTGGCCTTTCCAGTAACATAACTCGGTATCTTCCTTaGGAGAGCCGCTCCACACAG +
Preference number: 4 (lower is better)
Translates to: GSLPSECKLFGSGLSSNITRYLP*ESRSTQ
Trigger: CTGTGTGGAGCGGCTCTCCCAAGGAAGATACCGAGT...TATGTTACTGGAAAGGCCACTTCCGAAAAGTTTACATTCACTTGGAAGGCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278187.7
ENST00000454584.6
ENST00000524701.5
CDS-3UTR CCA 90 bp GCCCTGTCCCAGGTATACAAGGGTATACGTAAGTCTGTAACATCATTAGCTACAACTCGGTATCTTCCTTaGGAGAGCCGCTCCACACAG +
Preference number: 4 (lower is better)
Translates to: ALSQVYKGIRKSVTSLATTRYLP*ESRSTQ
Trigger: CTGTGTGGAGCGGCTCTCCCAAGGAAGATACCGAGT...TGTAGCTAATGATGTTACAGACTTACGTATACCCTTGTATACCTGGGACAGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278187.7
ENST00000454584.6
ENST00000524701.5
3UTR CAA 72 bp TGGGAGAGCCGCTCCACACAGAACTTGTTTGGGCATTaGCAAGGAGGATCTTCAGAAATTCGTTTCACTGCA +
Preference number: 4 (lower is better)
Translates to: WESRSTQNLFGH*QGGSSEIRFTA
Trigger: TGCAGTGAAACGAATTTCTGAAGATCCTCCTTGCAAATGCCCAAACAAGTTCTGTGTGGAGCGGCTCTCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524701.5
3UTR CAA 72 bp CGGTATCTTCCTTGGGAGAGCCGCTCCACACAGAACTaGTTTGGGCATTTGCAAGGAGGATCTTCAGAAATT +
Preference number: 4 (lower is better)
Translates to: RYLPWESRSTQN*FGHLQGGSSEI
Trigger: AATTTCTGAAGATCCTCCTTGCAAATGCCCAAACAAGTTCTGTGTGGAGCGGCTCTCCCAAGGAAGATACCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524701.5
CDS-3UTR TCA 90 bp GCAGACAGAGACACACTTCTCTGGGTTGCTTGTGGAGGACCTTTTCTTGTTGAGTCTCAGAGAAATAGATaGAGCATAGTCACTGGCCTC +
Preference number: 4 (lower is better)
Translates to: ADRDTLLWVACGGPFLVESQRNR*SIVTGL
Trigger: GAGGCCAGTGACTATGCTTCATCTATTTCTCTGAGA...CTCAACAAGAAAAGGTCCTCCACAAGCAACCCAGAGAAGTGTGTCTCTGTCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524701.5
CDS-3UTR GCA 90 bp GGCAGCCTTCCAAGTGAATGTAAACTTTTCGGAAGTGGCCTTTCCAGTAACATAAAAGGAGCCCGAGGGTaGACTGGTTTTGCATGGGAT +
Preference number: 4 (lower is better)
Translates to: GSLPSECKLFGSGLSSNIKGARG*TGFAWD
Trigger: ATCCCATGCAAAACCAGTGCACCCTCGGGCTCCTTT...TATGTTACTGGAAAGGCCACTTCCGAAAAGTTTACATTCACTTGGAAGGCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000278187.7
ENST00000454584.6
ENST00000524701.5
CDS-3UTR CCA 90 bp GGCAGCCTTCCAAGTGAATGTAAACTTTTCGGAAGTGGCCTTTCCAGTAACATAAGCCCGAGGGTGCACTaGTTTTGCATGGGATCTTCT +
Preference number: 4 (lower is better)
Translates to: GSLPSECKLFGSGLSSNISPRVH*FCMGSS
Trigger: AGAAGATCCCATGCAAAACCAGTGCACCCTCGGGCT...TATGTTACTGGAAAGGCCACTTCCGAAAAGTTTACATTCACTTGGAAGGCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278187.7
ENST00000454584.6
ENST00000524701.5
CDS-3UTR TCA 90 bp ACAGAACTTGTTTGGGCATTTGCAAGGAGGATCTTCAGAAATTCGTTTCACTGCCTCCCACACGGACCATaGCATGTTTGTTGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: TELVWAFARRIFRNSFHCLPHGP*HVCCAA
Trigger: TGCTGCACAACAAACATGTCATGGTCCGTGTGGGAG...GCAGTGAAACGAATTTCTGAAGATCCTCCTTGCAAATGCCCAAACAAGTTCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524701.5
CDS-3UTR GCA 90 bp GCAGACAGAGACACACTTCTCTGGGTTGCTTGTGGAGGACCTTTTCTTGTTGAGTTGGGCTCAGAGCAGTaGACATTATTTATCCACTTG +
Preference number: 4 (lower is better)
Translates to: ADRDTLLWVACGGPFLVELGSEQ*TLFIHL
Trigger: CAAGTGGATAAATAATGTGCACTGCTCTGAGCCCAA...CTCAACAAGAAAAGGTCCTCCACAAGCAACCCAGAGAAGTGTGTCTCTGTCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524701.5
CDS-3UTR GCA 90 bp ACAGAACTTGTTTGGGCATTTGCAAGGAGGATCTTCAGAAATTCGTTTCACTGCAAAGGAGCCCGAGGGTaGACTGGTTTTGCATGGGAT +
Preference number: 4 (lower is better)
Translates to: TELVWAFARRIFRNSFHCKGARG*TGFAWD
Trigger: ATCCCATGCAAAACCAGTGCACCCTCGGGCTCCTTT...GCAGTGAAACGAATTTCTGAAGATCCTCCTTGCAAATGCCCAAACAAGTTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524701.5
CDS-3UTR GCA 90 bp GGCAGCCTTCCAAGTGAATGTAAACTTTTCGGAAGTGGCCTTTCCAGTAACATACACACTTCTCTGGGTTaGTTGTGGAGGACCAAACCT +
Preference number: 4 (lower is better)
Translates to: GSLPSECKLFGSGLSSNIHTSLG*LWRTKP
Trigger: AGGTTTGGTCCTCCACAAGCAACCCAGAGAAGTGTG...TATGTTACTGGAAAGGCCACTTCCGAAAAGTTTACATTCACTTGGAAGGCTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278187.7
ENST00000454584.6
CDS-3UTR CCA 90 bp TTGGGCATTTGCAAGGAGGATCTTCAGAAATTCGTTTCACTGCATCATCCAGTATCCACTGCGTACCTTTaGGCTCAGAGCAGTGCACAT +
Preference number: 4 (lower is better)
Translates to: LGICKEDLQKFVSLHHPVSTAYL*AQSSAH
Trigger: ATGTGCACTGCTCTGAGCCCAAAGGTACGCAGTGGA...TACTGGATGATGCAGTGAAACGAATTTCTGAAGATCCTCCTTGCAAATGCCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524701.5
CDS-3UTR CCA 90 bp GCCCTGTCCCAGGTATACAAGGGTATACGTAAGTCTGTAACATCATTAGCTACATCTCTGGGTTGCTTGTaGAGGACCAAACCTTCCGAT +
Preference number: 4 (lower is better)
Translates to: ALSQVYKGIRKSVTSLATSLGCL*RTKPSD
Trigger: ATCGGAAGGTTTGGTCCTCCACAAGCAACCCAGAGA...TGTAGCTAATGATGTTACAGACTTACGTATACCCTTGTATACCTGGGACAGGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278187.7
ENST00000454584.6
CDS-3UTR CCA 90 bp GTTGGAGATTTGCTTTGGATAGGGGATGTTTTGCCATCCACACGGGAGATCTGCACTATACTGGAGAAGTaGATACAGGCCATTATGAGG +
Preference number: 4 (lower is better)
Translates to: VGDLLWIGDVLPSTREICTILEK*IQAIMR
Trigger: CCTCATAATGGCCTGTATCCACTTCTCCAGTATAGT...GCAGATCTCCCGTGTGGATGGCAAAACATCCCCTATCCAAAGCAAATCTCCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524701.5
3UTR CAA 72 bp ATCTTCCTTGGGAGAGCCGCTCCACACAGAACTTGTTaGGGCATTTGCAAGGAGGATCTTCAGAAATTCGTT +
Preference number: 4 (lower is better)
Translates to: IFLGRAAPHRTC*GICKEDLQKFV
Trigger: AACGAATTTCTGAAGATCCTCCTTGCAAATGCCCAAACAAGTTCTGTGTGGAGCGGCTCTCCCAAGGAAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524701.5
CDS-3UTR TCA 90 bp GGCAGCCTTCCAAGTGAATGTAAACTTTTCGGAAGTGGCCTTTCCAGTAACATAAGCCATTGGCTATACTaGTGCATATCAGAGAGGCCA +
Preference number: 4 (lower is better)
Translates to: GSLPSECKLFGSGLSSNISHWLY*CISERP
Trigger: TGGCCTCTCTGATATGCATCAGTATAGCCAATGGCT...TATGTTACTGGAAAGGCCACTTCCGAAAAGTTTACATTCACTTGGAAGGCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278187.7
ENST00000454584.6
ENST00000524701.5
CDS-3UTR GCA 90 bp GGCAGCCTTCCAAGTGAATGTAAACTTTTCGGAAGTGGCCTTTCCAGTAACATAACAGGTCTTGTTCTCTaGCTTGCCTCTGTGAATCTC +
Preference number: 4 (lower is better)
Translates to: GSLPSECKLFGSGLSSNITGLVL*LASVNL
Trigger: GAGATTCACAGAGGCAAGGCAGAGAACAAGACCTGT...TATGTTACTGGAAAGGCCACTTCCGAAAAGTTTACATTCACTTGGAAGGCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278187.7
ENST00000524701.5
CDS-3UTR GCA 90 bp GGCAGCCTTCCAAGTGAATGTAAACTTTTCGGAAGTGGCCTTTCCAGTAACATAAGGGTGCACTGGTTTTaGATGGGATCTTCTTCAACG +
Preference number: 4 (lower is better)
Translates to: GSLPSECKLFGSGLSSNIRVHWF*MGSSST
Trigger: CGTTGAAGAAGATCCCATGCAAAACCAGTGCACCCT...TATGTTACTGGAAAGGCCACTTCCGAAAAGTTTACATTCACTTGGAAGGCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278187.7
ENST00000454584.6
ENST00000524701.5
CDS-3UTR GCA 90 bp GTGAATGTAAACTTTTCGGAAGTGGCCTTTCCAGTAACATATTACTATTGTGAATCCACACGGGAGATCTaGAGCATTCGGCAGGGGTCG +
Preference number: 4 (lower is better)
Translates to: VNVNFSEVAFPVTYYYCESTREI*SIRQGS
Trigger: CGACCCCTGCCGAATGCTGCAGATCTCCCGTGTGGA...TTCACAATAGTAATATGTTACTGGAAAGGCCACTTCCGAAAAGTTTACATTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278187.7
ENST00000454584.6
ENST00000524701.5
CDS-3UTR GCA 90 bp AACTTTTCGGAAGTGGCCTTTCCAGTAACATATTACTATTGTGAATACTCTGTATCCACACGGGAGATCTaGAGCATTCGGCAGGGGTCG +
Preference number: 4 (lower is better)
Translates to: NFSEVAFPVTYYYCEYSVSTREI*SIRQGS
Trigger: CGACCCCTGCCGAATGCTGCAGATCTCCCGTGTGGA...TACAGAGTATTCACAATAGTAATATGTTACTGGAAAGGCCACTTCCGAAAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278187.7
ENST00000454584.6
ENST00000524701.5
CDS-3UTR CCA 90 bp AGCCTTCCAAGTGAATGTAAACTTTTCGGAAGTGGCCTTTCCAGTAACATATTACCCAGACACCCATGTTaGAGAGAACCACCAGAGCCA +
Preference number: 4 (lower is better)
Translates to: SLPSECKLFGSGLSSNILPRHPC*REPPEP
Trigger: TGGCTCTGGTGGTTCTCTCCAACATGGGTGTCTGGG...TAATATGTTACTGGAAAGGCCACTTCCGAAAAGTTTACATTCACTTGGAAGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278187.7
ENST00000524701.5
CDS-3UTR TCA 90 bp AGCCTTCCAAGTGAATGTAAACTTTTCGGAAGTGGCCTTTCCAGTAACATATTACTCCCACACGGACCATaGCATGTTTGTTGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: SLPSECKLFGSGLSSNILLPHGP*HVCCAA
Trigger: TGCTGCACAACAAACATGTCATGGTCCGTGTGGGAG...TAATATGTTACTGGAAAGGCCACTTCCGAAAAGTTTACATTCACTTGGAAGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278187.7
ENST00000454584.6
ENST00000524701.5
CDS-3UTR GCA 90 bp CTGTACAATTTACTCGTCAAAGTATCAACGTATGTCAGCTCATGTATGAATTACAGAGGCCAGGTCCACTaGGTACCTTTGGGCTCAGAG +
Preference number: 4 (lower is better)
Translates to: LYNLLVKVSTYVSSCMNYRGQVH*VPLGSE
Trigger: CTCTGAGCCCAAAGGTACGCAGTGGACCTGGCCTCT...GTAATTCATACATGAGCTGACATACGTTGATACTTTGACGAGTAAATTGTACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278187.7
ENST00000454584.6
ENST00000524701.5
CDS-3UTR CCA 90 bp AGCCTTCCAAGTGAATGTAAACTTTTCGGAAGTGGCCTTTCCAGTAACATATTAAGCCCGAGGGTGCACTaGTTTTGCATGGGATCTTCT +
Preference number: 4 (lower is better)
Translates to: SLPSECKLFGSGLSSNILSPRVH*FCMGSS
Trigger: AGAAGATCCCATGCAAAACCAGTGCACCCTCGGGCT...TAATATGTTACTGGAAAGGCCACTTCCGAAAAGTTTACATTCACTTGGAAGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278187.7
ENST00000454584.6
ENST00000524701.5
CDS-3UTR CCA 90 bp GTGAATGTAAACTTTTCGGAAGTGGCCTTTCCAGTAACATATTACTATTGTGAAGCTCCACACCATACCTaGCTGCAATCCGGCCAAGCT +
Preference number: 4 (lower is better)
Translates to: VNVNFSEVAFPVTYYYCEAPHHT*LQSGQA
Trigger: AGCTTGGCCGGATTGCAGCCAGGTATGGTGTGGAGC...TTCACAATAGTAATATGTTACTGGAAAGGCCACTTCCGAAAAGTTTACATTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278187.7
ENST00000454584.6
ENST00000524701.5
CDS-3UTR TCA 90 bp GCCCTGTCCCAGGTATACAAGGGTATACGTAAGTCTGTAACATCATTAGCTACATCTAAGGGGGTGTACTaGAAACTTCTAAAAGTACCC +
Preference number: 4 (lower is better)
Translates to: ALSQVYKGIRKSVTSLATSKGVY*KLLKVP
Trigger: GGGTACTTTTAGAAGTTTTCAGTACACCCCCTTAGA...TGTAGCTAATGATGTTACAGACTTACGTATACCCTTGTATACCTGGGACAGGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000278187.7
ENST00000454584.6
ENST00000524701.5
CDS-3UTR GCA 90 bp GCCCTGTCCCAGGTATACAAGGGTATACGTAAGTCTGTAACATCATTAGCTACATTGGGCTCAGAGCAGTaGACATTATTTATCCACTTG +
Preference number: 4 (lower is better)
Translates to: ALSQVYKGIRKSVTSLATLGSEQ*TLFIHL
Trigger: CAAGTGGATAAATAATGTGCACTGCTCTGAGCCCAA...TGTAGCTAATGATGTTACAGACTTACGTATACCCTTGTATACCTGGGACAGGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278187.7
ENST00000454584.6
ENST00000524701.5
CDS-3UTR CCA 90 bp GGCAGCCTTCCAAGTGAATGTAAACTTTTCGGAAGTGGCCTTTCCAGTAACATAGTTGGAGATTTGCTTTaGATAGGGGATGTTTTGCCA +
Preference number: 4 (lower is better)
Translates to: GSLPSECKLFGSGLSSNIVGDLL*IGDVLP
Trigger: TGGCAAAACATCCCCTATCCAAAGCAAATCTCCAAC...TATGTTACTGGAAAGGCCACTTCCGAAAAGTTTACATTCACTTGGAAGGCTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000278187.7
ENST00000454584.6
ENST00000524701.5
CDS-3UTR TCA 90 bp AGCCTTCCAAGTGAATGTAAACTTTTCGGAAGTGGCCTTTCCAGTAACATATTAAGCCATTGGCTATACTaGTGCATATCAGAGAGGCCA +
Preference number: 4 (lower is better)
Translates to: SLPSECKLFGSGLSSNILSHWLY*CISERP
Trigger: TGGCCTCTCTGATATGCATCAGTATAGCCAATGGCT...TAATATGTTACTGGAAAGGCCACTTCCGAAAAGTTTACATTCACTTGGAAGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278187.7
ENST00000454584.6
ENST00000524701.5
CDS-3UTR TCA 90 bp GTGAATGTAAACTTTTCGGAAGTGGCCTTTCCAGTAACATATTACTATTGTGAACTCCCACACGGACCATaGCATGTTTGTTGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: VNVNFSEVAFPVTYYYCELPHGP*HVCCAA
Trigger: TGCTGCACAACAAACATGTCATGGTCCGTGTGGGAG...TTCACAATAGTAATATGTTACTGGAAAGGCCACTTCCGAAAAGTTTACATTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278187.7
ENST00000454584.6
ENST00000524701.5
CDS-3UTR TCA 90 bp AACTTTTCGGAAGTGGCCTTTCCAGTAACATATTACTATTGTGAATACTCTGTAGGATACAGGCCATTATaGGGGTCCCCTTGTCATGAC +
Preference number: 4 (lower is better)
Translates to: NFSEVAFPVTYYYCEYSVGYRPL*GSPCHD
Trigger: GTCATGACAAGGGGACCCTCATAATGGCCTGTATCC...TACAGAGTATTCACAATAGTAATATGTTACTGGAAAGGCCACTTCCGAAAAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000278187.7
ENST00000454584.6
ENST00000524701.5
CDS-3UTR GCA 90 bp AGCCTTCCAAGTGAATGTAAACTTTTCGGAAGTGGCCTTTCCAGTAACATATTACTCCTGCATAGTTTCTaGAAGTTGACAGAGCAAGGC +
Preference number: 4 (lower is better)
Translates to: SLPSECKLFGSGLSSNILLLHSF*KLTEQG
Trigger: GCCTTGCTCTGTCAACTTGCAGAAACTATGCAGGAG...TAATATGTTACTGGAAAGGCCACTTCCGAAAAGTTTACATTCACTTGGAAGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278187.7
ENST00000454584.6
ENST00000524701.5
CDS-3UTR GCA 90 bp GCCCTGTCCCAGGTATACAAGGGTATACGTAAGTCTGTAACATCATTAGCTACAACTTGTTTGGGCATTTaGAAGGAGGATCTTCAGAAA +
Preference number: 4 (lower is better)
Translates to: ALSQVYKGIRKSVTSLATTCLGI*KEDLQK
Trigger: TTTCTGAAGATCCTCCTTGCAAATGCCCAAACAAGT...TGTAGCTAATGATGTTACAGACTTACGTATACCCTTGTATACCTGGGACAGGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278187.7
ENST00000454584.6
ENST00000524701.5
CDS-3UTR CCA 90 bp ACAGAACTTGTTTGGGCATTTGCAAGGAGGATCTTCAGAAATTCGTTTCACTGCACACTGCTAAGAGTTTaGAGTAAAGAAGCACAGGTC +
Preference number: 4 (lower is better)
Translates to: TELVWAFARRIFRNSFHCTLLRV*SKEAQV
Trigger: GACCTGTGCTTCTTTACTCCAAACTCTTAGCAGTGT...GCAGTGAAACGAATTTCTGAAGATCCTCCTTGCAAATGCCCAAACAAGTTCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524701.5
CDS-3UTR CCA 90 bp AGCCTTCCAAGTGAATGTAAACTTTTCGGAAGTGGCCTTTCCAGTAACATATTAATATCAAAGACAGGCTaGGCAAATCAGACCCCAGCT +
Preference number: 4 (lower is better)
Translates to: SLPSECKLFGSGLSSNILISKTG*ANQTPA
Trigger: AGCTGGGGTCTGATTTGCCCAGCCTGTCTTTGATAT...TAATATGTTACTGGAAAGGCCACTTCCGAAAAGTTTACATTCACTTGGAAGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278187.7
ENST00000524701.5
CDS-3UTR CCA 90 bp AACTTTTCGGAAGTGGCCTTTCCAGTAACATATTACTATTGTGAATACTCTGTATCCACTGCGTACCTTTaGGCTCAGAGCAGTGCACAT +
Preference number: 4 (lower is better)
Translates to: NFSEVAFPVTYYYCEYSVSTAYL*AQSSAH
Trigger: ATGTGCACTGCTCTGAGCCCAAAGGTACGCAGTGGA...TACAGAGTATTCACAATAGTAATATGTTACTGGAAAGGCCACTTCCGAAAAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278187.7
ENST00000454584.6
ENST00000524701.5
CDS-3UTR CCA 90 bp GTAAACTTTTCGGAAGTGGCCTTTCCAGTAACATATTACTATTGTGAATACTCTTCCACTGCGTACCTTTaGGCTCAGAGCAGTGCACAT +
Preference number: 4 (lower is better)
Translates to: VNFSEVAFPVTYYYCEYSSTAYL*AQSSAH
Trigger: ATGTGCACTGCTCTGAGCCCAAAGGTACGCAGTGGA...AGAGTATTCACAATAGTAATATGTTACTGGAAAGGCCACTTCCGAAAAGTTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278187.7
ENST00000454584.6
ENST00000524701.5
CDS-3UTR CCA 90 bp CCAAGTGAATGTAAACTTTTCGGAAGTGGCCTTTCCAGTAACATATTACTATTGTCTCTGGGTTGCTTGTaGAGGACCAAACCTTCCGAT +
Preference number: 4 (lower is better)
Translates to: PSECKLFGSGLSSNILLLSLGCL*RTKPSD
Trigger: ATCGGAAGGTTTGGTCCTCCACAAGCAACCCAGAGA...CAATAGTAATATGTTACTGGAAAGGCCACTTCCGAAAAGTTTACATTCACTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278187.7
ENST00000454584.6
CDS-3UTR TCA 90 bp AGCCTTCCAAGTGAATGTAAACTTTTCGGAAGTGGCCTTTCCAGTAACATATTAATAGTTTCTGCAAGTTaGCAGAGCAAGGCACCATTG +
Preference number: 4 (lower is better)
Translates to: SLPSECKLFGSGLSSNILIVSAS*QSKAPL
Trigger: CAATGGTGCCTTGCTCTGTCAACTTGCAGAAACTAT...TAATATGTTACTGGAAAGGCCACTTCCGAAAAGTTTACATTCACTTGGAAGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278187.7
ENST00000454584.6
ENST00000524701.5
CDS-3UTR GCA 90 bp CCAAGTGAATGTAAACTTTTCGGAAGTGGCCTTTCCAGTAACATATTACTATTGAGGGTGCACTGGTTTTaGATGGGATCTTCTTCAACG +
Preference number: 4 (lower is better)
Translates to: PSECKLFGSGLSSNILLLRVHWF*MGSSST
Trigger: CGTTGAAGAAGATCCCATGCAAAACCAGTGCACCCT...CAATAGTAATATGTTACTGGAAAGGCCACTTCCGAAAAGTTTACATTCACTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278187.7
ENST00000454584.6
ENST00000524701.5
CDS-3UTR GCA 90 bp CTGTACAATTTACTCGTCAAAGTATCAACGTATGTCAGCTCATGTATGAATTACCACACTTCTCTGGGTTaGTTGTGGAGGACCAAACCT +
Preference number: 4 (lower is better)
Translates to: LYNLLVKVSTYVSSCMNYHTSLG*LWRTKP
Trigger: AGGTTTGGTCCTCCACAAGCAACCCAGAGAAGTGTG...GTAATTCATACATGAGCTGACATACGTTGATACTTTGACGAGTAAATTGTACAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278187.7
ENST00000454584.6
CDS-3UTR GCA 90 bp TTGGGCATTTGCAAGGAGGATCTTCAGAAATTCGTTTCACTGCATCATCCAGTAACTTGTTTGGGCATTTaGAAGGAGGATCTTCAGAAA +
Preference number: 4 (lower is better)
Translates to: LGICKEDLQKFVSLHHPVTCLGI*KEDLQK
Trigger: TTTCTGAAGATCCTCCTTGCAAATGCCCAAACAAGT...TACTGGATGATGCAGTGAAACGAATTTCTGAAGATCCTCCTTGCAAATGCCCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524701.5
CDS-3UTR CCA 90 bp CCAAGTGAATGTAAACTTTTCGGAAGTGGCCTTTCCAGTAACATATTACTATTGATATCAAAGACAGGCTaGGCAAATCAGACCCCAGCT +
Preference number: 4 (lower is better)
Translates to: PSECKLFGSGLSSNILLLISKTG*ANQTPA
Trigger: AGCTGGGGTCTGATTTGCCCAGCCTGTCTTTGATAT...CAATAGTAATATGTTACTGGAAAGGCCACTTCCGAAAAGTTTACATTCACTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278187.7
ENST00000524701.5
CDS-3UTR TCA 90 bp GTGAATGTAAACTTTTCGGAAGTGGCCTTTCCAGTAACATATTACTATTGTGAAAGCCATTGGCTATACTaGTGCATATCAGAGAGGCCA +
Preference number: 4 (lower is better)
Translates to: VNVNFSEVAFPVTYYYCESHWLY*CISERP
Trigger: TGGCCTCTCTGATATGCATCAGTATAGCCAATGGCT...TTCACAATAGTAATATGTTACTGGAAAGGCCACTTCCGAAAAGTTTACATTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278187.7
ENST00000454584.6
ENST00000524701.5
CDS-3UTR TCA 90 bp AGCCTTCCAAGTGAATGTAAACTTTTCGGAAGTGGCCTTTCCAGTAACATATTATCTAAGGGGGTGTACTaGAAACTTCTAAAAGTACCC +
Preference number: 4 (lower is better)
Translates to: SLPSECKLFGSGLSSNILSKGVY*KLLKVP
Trigger: GGGTACTTTTAGAAGTTTTCAGTACACCCCCTTAGA...TAATATGTTACTGGAAAGGCCACTTCCGAAAAGTTTACATTCACTTGGAAGGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000278187.7
ENST00000454584.6
ENST00000524701.5
CDS-3UTR GCA 90 bp GTGAATGTAAACTTTTCGGAAGTGGCCTTTCCAGTAACATATTACTATTGTGAAACAGGTCTTGTTCTCTaGCTTGCCTCTGTGAATCTC +
Preference number: 4 (lower is better)
Translates to: VNVNFSEVAFPVTYYYCETGLVL*LASVNL
Trigger: GAGATTCACAGAGGCAAGGCAGAGAACAAGACCTGT...TTCACAATAGTAATATGTTACTGGAAAGGCCACTTCCGAAAAGTTTACATTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278187.7
ENST00000524701.5
CDS-3UTR GCA 90 bp CTGTACAATTTACTCGTCAAAGTATCAACGTATGTCAGCTCATGTATGAATTACCTCCTGCATAGTTTCTaGAAGTTGACAGAGCAAGGC +
Preference number: 4 (lower is better)
Translates to: LYNLLVKVSTYVSSCMNYLLHSF*KLTEQG
Trigger: GCCTTGCTCTGTCAACTTGCAGAAACTATGCAGGAG...GTAATTCATACATGAGCTGACATACGTTGATACTTTGACGAGTAAATTGTACAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278187.7
ENST00000454584.6
ENST00000524701.5
CDS-3UTR GCA 90 bp AACTTTTCGGAAGTGGCCTTTCCAGTAACATATTACTATTGTGAATACTCTGTACTCCTGCATAGTTTCTaGAAGTTGACAGAGCAAGGC +
Preference number: 4 (lower is better)
Translates to: NFSEVAFPVTYYYCEYSVLLHSF*KLTEQG
Trigger: GCCTTGCTCTGTCAACTTGCAGAAACTATGCAGGAG...TACAGAGTATTCACAATAGTAATATGTTACTGGAAAGGCCACTTCCGAAAAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278187.7
ENST00000454584.6
ENST00000524701.5
CDS-3UTR GCA 90 bp CTGTACAATTTACTCGTCAAAGTATCAACGTATGTCAGCTCATGTATGAATTACAGGGTGCACTGGTTTTaGATGGGATCTTCTTCAACG +
Preference number: 4 (lower is better)
Translates to: LYNLLVKVSTYVSSCMNYRVHWF*MGSSST
Trigger: CGTTGAAGAAGATCCCATGCAAAACCAGTGCACCCT...GTAATTCATACATGAGCTGACATACGTTGATACTTTGACGAGTAAATTGTACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278187.7
ENST00000454584.6
ENST00000524701.5
CDS-3UTR CCA 90 bp GCCCTGTCCCAGGTATACAAGGGTATACGTAAGTCTGTAACATCATTAGCTACATATTTTGCTGTTTATTaGTATAAAACAGCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: ALSQVYKGIRKSVTSLATYFAVY*YKTALS
Trigger: GGACAGGGCTGTTTTATACCAATAAACAGCAAAATA...TGTAGCTAATGATGTTACAGACTTACGTATACCCTTGTATACCTGGGACAGGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278187.7
ENST00000454584.6
ENST00000524701.5
CDS-3UTR TCA 90 bp GTGAATGTAAACTTTTCGGAAGTGGCCTTTCCAGTAACATATTACTATTGTGAAATAGTTTCTGCAAGTTaGCAGAGCAAGGCACCATTG +
Preference number: 4 (lower is better)
Translates to: VNVNFSEVAFPVTYYYCEIVSAS*QSKAPL
Trigger: CAATGGTGCCTTGCTCTGTCAACTTGCAGAAACTAT...TTCACAATAGTAATATGTTACTGGAAAGGCCACTTCCGAAAAGTTTACATTCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278187.7
ENST00000454584.6
ENST00000524701.5
CDS-3UTR TCA 90 bp CCAAGTGAATGTAAACTTTTCGGAAGTGGCCTTTCCAGTAACATATTACTATTGTCTAAGGGGGTGTACTaGAAACTTCTAAAAGTACCC +
Preference number: 4 (lower is better)
Translates to: PSECKLFGSGLSSNILLLSKGVY*KLLKVP
Trigger: GGGTACTTTTAGAAGTTTTCAGTACACCCCCTTAGA...CAATAGTAATATGTTACTGGAAAGGCCACTTCCGAAAAGTTTACATTCACTTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000278187.7
ENST00000454584.6
ENST00000524701.5
CDS-3UTR GCA 90 bp CCAAGTGAATGTAAACTTTTCGGAAGTGGCCTTTCCAGTAACATATTACTATTGTTGGGCTCAGAGCAGTaGACATTATTTATCCACTTG +
Preference number: 4 (lower is better)
Translates to: PSECKLFGSGLSSNILLLLGSEQ*TLFIHL
Trigger: CAAGTGGATAAATAATGTGCACTGCTCTGAGCCCAA...CAATAGTAATATGTTACTGGAAAGGCCACTTCCGAAAAGTTTACATTCACTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278187.7
ENST00000454584.6
ENST00000524701.5
CDS-3UTR CCA 90 bp GTAAACTTTTCGGAAGTGGCCTTTCCAGTAACATATTACTATTGTGAATACTCTCACACAGAACTTGTTTaGGCATTTGCAAGGAGGATC +
Preference number: 4 (lower is better)
Translates to: VNFSEVAFPVTYYYCEYSHTELV*AFARRI
Trigger: GATCCTCCTTGCAAATGCCCAAACAAGTTCTGTGTG...AGAGTATTCACAATAGTAATATGTTACTGGAAAGGCCACTTCCGAAAAGTTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278187.7
ENST00000454584.6
ENST00000524701.5
CDS-3UTR CCA 90 bp CCAAGTGAATGTAAACTTTTCGGAAGTGGCCTTTCCAGTAACATATTACTATTGGTTGGAGATTTGCTTTaGATAGGGGATGTTTTGCCA +
Preference number: 4 (lower is better)
Translates to: PSECKLFGSGLSSNILLLVGDLL*IGDVLP
Trigger: TGGCAAAACATCCCCTATCCAAAGCAAATCTCCAAC...CAATAGTAATATGTTACTGGAAAGGCCACTTCCGAAAAGTTTACATTCACTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000278187.7
ENST00000454584.6
ENST00000524701.5
CDS-3UTR CCA 90 bp CCTTATAACTGGCAGAGACCACCAAGTAGTTATCTGGATTCATGTCCTTTAGAGTATTTTGCTGTTTATTaGTATAAAACAGCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: PYNWQRPPSSYLDSCPLEYFAVY*YKTALS
Trigger: GGACAGGGCTGTTTTATACCAATAAACAGCAAAATA...CTCTAAAGGACATGAATCCAGATAACTACTTGGTGGTCTCTGCCAGTTATAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524701.5
CDS-3UTR CCA 90 bp GTGAATGTAAACTTTTCGGAAGTGGCCTTTCCAGTAACATATTACTATTGTGAAACACTGCTAAGAGTTTaGAGTAAAGAAGCACAGGTC +
Preference number: 4 (lower is better)
Translates to: VNVNFSEVAFPVTYYYCETLLRV*SKEAQV
Trigger: GACCTGTGCTTCTTTACTCCAAACTCTTAGCAGTGT...TTCACAATAGTAATATGTTACTGGAAAGGCCACTTCCGAAAAGTTTACATTCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278187.7
ENST00000524701.5
CDS-3UTR CCA 90 bp GTAAACTTTTCGGAAGTGGCCTTTCCAGTAACATATTACTATTGTGAATACTCTGTTGGAGATTTGCTTTaGATAGGGGATGTTTTGCCA +
Preference number: 4 (lower is better)
Translates to: VNFSEVAFPVTYYYCEYSVGDLL*IGDVLP
Trigger: TGGCAAAACATCCCCTATCCAAAGCAAATCTCCAAC...AGAGTATTCACAATAGTAATATGTTACTGGAAAGGCCACTTCCGAAAAGTTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000278187.7
ENST00000454584.6
ENST00000524701.5
CDS-3UTR GCA 90 bp GTGAATGTAAACTTTTCGGAAGTGGCCTTTCCAGTAACATATTACTATTGTGAAACTTGTTTGGGCATTTaGAAGGAGGATCTTCAGAAA +
Preference number: 4 (lower is better)
Translates to: VNVNFSEVAFPVTYYYCETCLGI*KEDLQK
Trigger: TTTCTGAAGATCCTCCTTGCAAATGCCCAAACAAGT...TTCACAATAGTAATATGTTACTGGAAAGGCCACTTCCGAAAAGTTTACATTCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278187.7
ENST00000454584.6
ENST00000524701.5
CDS-3UTR GCA 90 bp AACTTTTCGGAAGTGGCCTTTCCAGTAACATATTACTATTGTGAATACTCTGTAATGACATGTTTGTTGTaGAGCATCCTAATGAAGAGG +
Preference number: 4 (lower is better)
Translates to: NFSEVAFPVTYYYCEYSVMTCLL*SILMKR
Trigger: CCTCTTCATTAGGATGCTGCACAACAAACATGTCAT...TACAGAGTATTCACAATAGTAATATGTTACTGGAAAGGCCACTTCCGAAAAGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278187.7
ENST00000454584.6
ENST00000524701.5
CDS-3UTR GCA 90 bp GTGAATGTAAACTTTTCGGAAGTGGCCTTTCCAGTAACATATTACTATTGTGAAATGACATGTTTGTTGTaGAGCATCCTAATGAAGAGG +
Preference number: 4 (lower is better)
Translates to: VNVNFSEVAFPVTYYYCEMTCLL*SILMKR
Trigger: CCTCTTCATTAGGATGCTGCACAACAAACATGTCAT...TTCACAATAGTAATATGTTACTGGAAAGGCCACTTCCGAAAAGTTTACATTCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278187.7
ENST00000454584.6
ENST00000524701.5
CDS-3UTR TCA 90 bp CTGTACAATTTACTCGTCAAAGTATCAACGTATGTCAGCTCATGTATGAATTACACATATGAACTAAACTaGCTATACTGGAGAAGTGGA +
Preference number: 4 (lower is better)
Translates to: LYNLLVKVSTYVSSCMNYTYELN*LYWRSG
Trigger: TCCACTTCTCCAGTATAGTCAGTTTAGTTCATATGT...GTAATTCATACATGAGCTGACATACGTTGATACTTTGACGAGTAAATTGTACAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278187.7
ENST00000454584.6
ENST00000524701.5
CDS-3UTR TCA 90 bp GTAAACTTTTCGGAAGTGGCCTTTCCAGTAACATATTACTATTGTGAATACTCTACATATGAACTAAACTaGCTATACTGGAGAAGTGGA +
Preference number: 4 (lower is better)
Translates to: VNFSEVAFPVTYYYCEYSTYELN*LYWRSG
Trigger: TCCACTTCTCCAGTATAGTCAGTTTAGTTCATATGT...AGAGTATTCACAATAGTAATATGTTACTGGAAAGGCCACTTCCGAAAAGTTTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278187.7
ENST00000454584.6
ENST00000524701.5
CDS GCA 90 bp GGGACCCCGCCACCGTGCGCCGGGCCTTGCAGTGGGCGCGCTACCTaGGCCACATCCATCGGCGCTTTGGTCGGCATGGCCCCATTCGCA +
Preference number: 5 (lower is better)
Translates to: GTPPPCAGPCSGRAT*ATSIGALVGMAPFA
Trigger: TGCGAATGGGGCCATGCCGACCAAAGCGCCGATGGATGTGGCGCAGGTAGCGCGCCCACTGCAAGGCCCGGCGCACGGTGGCGGGGTCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528582.5
ENST00000648096.1
CDS GCA 90 bp CTACCTACGTCAGCACCTGGGACCCCGCCACCGTGCGCCGGGCCTTaGAGTGGGCGCGCTACCTGCGCCACATCCATCGGCGCTTTGGTC +
Preference number: 5 (lower is better)
Translates to: LPTSAPGTPPPCAGP*SGRATCATSIGALV
Trigger: GACCAAAGCGCCGATGGATGTGGCGCAGGTAGCGCGCCCACTGCAAGGCCCGGCGCACGGTGGCGGGGTCCCAGGTGCTGACGTAGGTAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528582.5
ENST00000648096.1
CDS CCA 90 bp TACGTCAGCACCTGGGACCCCGCCACCGTGCGCCGGGCCTTGCAGTaGGCGCGCTACCTGCGCCACATCCATCGGCGCTTTGGTCGGCAT +
Preference number: 5 (lower is better)
Translates to: YVSTWDPATVRRALQ*ARYLRHIHRRFGRH
Trigger: ATGCCGACCAAAGCGCCGATGGATGTGGCGCAGGTAGCGCGCCCACTGCAAGGCCCGGCGCACGGTGGCGGGGTCCCAGGTGCTGACGTA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528582.5
ENST00000648096.1
CDS CCA 90 bp GGCCTTGCAGTGGGCGCGCTACCTGCGCCACATCCATCGGCGCTTTaGTCGGCATGGCCCCATTCGCACGGCTCTGGAGCGGCGGCTGCA +
Preference number: 5 (lower is better)
Translates to: GLAVGALPAPHPSAL*SAWPHSHGSGAAAA
Trigger: TGCAGCCGCCGCTCCAGAGCCGTGCGAATGGGGCCATGCCGACCAAAGCGCCGATGGATGTGGCGCAGGTAGCGCGCCCACTGCAAGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648096.1
CDS GCA 90 bp CGGTCTCAAGCACTACCTACGTCAGCACCTGGGACCCCGCCACCGTaGGCCGGGCCTTGCAGTGGGCGCGCTACCTGCGCCACATCCATC +
Preference number: 5 (lower is better)
Translates to: RSQALPTSAPGTPPP*AGPCSGRATCATSI
Trigger: GATGGATGTGGCGCAGGTAGCGCGCCCACTGCAAGGCCCGGCGCACGGTGGCGGGGTCCCAGGTGCTGACGTAGGTAGTGCTTGAGACCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528582.5
ENST00000648096.1
CDS GCA 90 bp GCTTTGGTCGGCATGGCCCCATTCGCACGGCTCTGGAGCGGCGGCTaGACAACCAGTGGAGGCAAGAGGGCGGCTTTGGGCGGGGTCCAG +
Preference number: 5 (lower is better)
Translates to: ALVGMAPFARLWSGG*TTSGGKRAALGGVQ
Trigger: CTGGACCCCGCCCAAAGCCGCCCTCTTGCCTCCACTGGTTGTGCAGCCGCCGCTCCAGAGCCGTGCGAATGGGGCCATGCCGACCAAAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648096.1
CDS GCA 90 bp GTGAAAGCGGAAGTAGGGCCTTCGCGCACCTCATGGAATCCCTTCTaGAGCACCTGGATCGCTTTTCCGAGCTTCTGGCGGTCTCAAGCA +
Preference number: 5 (lower is better)
Translates to: VKAEVGPSRTSWNPF*STWIAFPSFWRSQA
Trigger: TGCTTGAGACCGCCAGAAGCTCGGAAAAGCGATCCAGGTGCTGCAGAAGGGATTCCATGAGGTGCGCGAAGGCCCTACTTCCGCTTTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648096.1
CDS TCA 90 bp GGTAGCAAATTAGCTTCATGTCTGCTGGCTAGCCATTGGCTATACTaGTGCATATCAGAGAGGCCAGGTCCACTGCGTACCTTTGGGCTC +
Preference number: 5 (lower is better)
Translates to: GSKLASCLLASHWLY*CISERPGPLRTFGL
Trigger: GAGCCCAAAGGTACGCAGTGGACCTGGCCTCTCTGATATGCATCAGTATAGCCAATGGCTAGCCAGCAGACATGAAGCTAATTTGCTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000278187.7
ENST00000454584.6
ENST00000524701.5
ENST00000528582.5
ENST00000532398.1
ENST00000533092.1
ENST00000533363.5
ENST00000534801.5
ENST00000630668.2
CDS CCA 90 bp TGCTGCGGTTGTCCGGGGTGTTCCGCAATAGGGATAAGGAACACATaGTTGTTTCCAGAGAATCAGAAAGTCACCCCCTGCAGTGAATAC +
Preference number: 5 (lower is better)
Translates to: CCGCPGCSAIGIRNT*LFPENQKVTPCSEY
Trigger: GTATTCACTGCAGGGGGTGACTTTCTGATTCTCTGGAAACAACCATGTGTTCCTTATCCCTATTGCGGAACACCCCGGACAACCGCAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533363.5
CDS-3UTR CAA 90 bp GTTGGAGATTTGCTTTGGATAGGGGATGTTTTGCCATCCACACGGGAGATCTGCTGGATAGGGGATGTTTaGCCATCCACACGGGAGATC +
Preference number: 5 (lower is better)
Translates to: VGDLLWIGDVLPSTREICWIGDV*PSTREI
Trigger: GATCTCCCGTGTGGATGGCAAAACATCCCCTATCCA...GCAGATCTCCCGTGTGGATGGCAAAACATCCCCTATCCAAAGCAAATCTCCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524701.5
CDS GCA 90 bp TGCCCAGAGTCAAGGAACACGGATAAAGACGCTGGGAGATTGACATaGATTTCGACCAATAGCATTGCAGAGAGGCGTATCATTTCGCGG +
Preference number: 5 (lower is better)
Translates to: CPESRNTDKDAGRLT*ISTNSIAERRIISR
Trigger: CCGCGAAATGATACGCCTCTCTGCAATGCTATTGGTCGAAATGCATGTCAATCTCCCAGCGTCTTTATCCGTGTTCCTTGACTCTGGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648096.1
CDS CCA 90 bp CTTGTAATACCTTCTCTTAGGCAGTCAAAACCCAGACACCCATGTTaGAGAGAACCACCAGAGCCACCACCTTCACCGCAGTTAGAGGAA +
Preference number: 5 (lower is better)
Translates to: LVIPSLRQSKPRHPC*REPPEPPPSPQLEE
Trigger: TTCCTCTAACTGCGGTGAAGGTGGTGGCTCTGGTGGTTCTCTCCAACATGGGTGTCTGGGTTTTGACTGCCTAAGAGAAGGTATTACAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278187.7
ENST00000524701.5
ENST00000630668.2
CDS-3UTR CAA 90 bp GGCAGCCTTCCAAGTGAATGTAAACTTTTCGGAAGTGGCCTTTCCAGTAACATAGTCCACTGCGTACCTTaGGGCTCAGAGCAGTGCACA +
Preference number: 5 (lower is better)
Translates to: GSLPSECKLFGSGLSSNIVHCVP*GSEQCT
Trigger: TGTGCACTGCTCTGAGCCCAAAGGTACGCAGTGGAC...TATGTTACTGGAAAGGCCACTTCCGAAAAGTTTACATTCACTTGGAAGGCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278187.7
ENST00000454584.6
ENST00000524701.5
CDS-3UTR CAA 90 bp GGCAGCCTTCCAAGTGAATGTAAACTTTTCGGAAGTGGCCTTTCCAGTAACATACACTCGGTATCTTCCTaGGGAGAGCCGCTCCACACA +
Preference number: 5 (lower is better)
Translates to: GSLPSECKLFGSGLSSNIHSVSS*GEPLHT
Trigger: TGTGTGGAGCGGCTCTCCCAAGGAAGATACCGAGTG...TATGTTACTGGAAAGGCCACTTCCGAAAAGTTTACATTCACTTGGAAGGCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278187.7
ENST00000454584.6
ENST00000524701.5
CDS-3UTR CAA 90 bp GCCCTGTCCCAGGTATACAAGGGTATACGTAAGTCTGTAACATCATTAGCTACACACTCGGTATCTTCCTaGGGAGAGCCGCTCCACACA +
Preference number: 5 (lower is better)
Translates to: ALSQVYKGIRKSVTSLATHSVSS*GEPLHT
Trigger: TGTGTGGAGCGGCTCTCCCAAGGAAGATACCGAGTG...TGTAGCTAATGATGTTACAGACTTACGTATACCCTTGTATACCTGGGACAGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278187.7
ENST00000454584.6
ENST00000524701.5
CDS-3UTR CAA 90 bp TGGGAGAGCCGCTCCACACAGAACTTGTTTGGGCATTTGCAAGGAGGATCTTCACGGACCATGACATGTTaGTTGTGCAGCATCCTAATG +
Preference number: 5 (lower is better)
Translates to: WESRSTQNLFGHLQGGSSRTMTC*LCSILM
Trigger: CATTAGGATGCTGCACAACAAACATGTCATGGTCCG...TGAAGATCCTCCTTGCAAATGCCCAAACAAGTTCTGTGTGGAGCGGCTCTCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524701.5
CDS TCA 90 bp TACTTAAGGATATTTCCAAAGCGAAAGGAAGCGCGGAGACGTTCATaGCTGGCATCATCTCGCACGTGGTTCCGGAAATTCTCGGTAGGA +
Preference number: 5 (lower is better)
Translates to: YLRIFPKRKEARRRS*LASSRTWFRKFSVG
Trigger: TCCTACCGAGAATTTCCGGAACCACGTGCGAGATGATGCCAGTCATGAACGTCTCCGCGCTTCCTTTCGCTTTGGAAATATCCTTAAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648096.1
CDS GCA 90 bp CTAGCCATTGGCTATACTGATGCATATCAGAGAGGCCAGGTCCACTaGGTACCTTTGGGCTCAGAGCAGTGCACATTATTTATCCACTTG +
Preference number: 5 (lower is better)
Translates to: LAIGYTDAYQRGQVH*VPLGSEQCTLFIHL
Trigger: CAAGTGGATAAATAATGTGCACTGCTCTGAGCCCAAAGGTACGCAGTGGACCTGGCCTCTCTGATATGCATCAGTATAGCCAATGGCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000278187.7
ENST00000454584.6
ENST00000524701.5
ENST00000528582.5
ENST00000532398.1
ENST00000533092.1
ENST00000533363.5
ENST00000534801.5
ENST00000630668.2
CDS CCA 90 bp GCTATACTGATGCATATCAGAGAGGCCAGGTCCACTGCGTACCTTTaGGCTCAGAGCAGTGCACATTATTTATCCACTTGTAATACGTGC +
Preference number: 5 (lower is better)
Translates to: AILMHIREARSTAYL*AQSSAHYLSTCNTC
Trigger: GCACGTATTACAAGTGGATAAATAATGTGCACTGCTCTGAGCCCAAAGGTACGCAGTGGACCTGGCCTCTCTGATATGCATCAGTATAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533363.5
CDS-3UTR CAA 90 bp GCAGACAGAGACACACTTCTCTGGGTTGCTTGTGGAGGACCTTTTCTTGTTGAGTCCTTCCCTAATAGATaGGTTAACCACAAGGCCAGA +
Preference number: 5 (lower is better)
Translates to: ADRDTLLWVACGGPFLVESFPNR*VNHKAR
Trigger: TCTGGCCTTGTGGTTAACCAATCTATTAGGGAAGGA...CTCAACAAGAAAAGGTCCTCCACAAGCAACCCAGAGAAGTGTGTCTCTGTCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524701.5
CDS-3UTR CAA 90 bp GGCAGCCTTCCAAGTGAATGTAAACTTTTCGGAAGTGGCCTTTCCAGTAACATAACTTCTCTGGGTTGCTaGTGGAGGACCAAACCTTCC +
Preference number: 5 (lower is better)
Translates to: GSLPSECKLFGSGLSSNITSLGC*WRTKPS
Trigger: GGAAGGTTTGGTCCTCCACAAGCAACCCAGAGAAGT...TATGTTACTGGAAAGGCCACTTCCGAAAAGTTTACATTCACTTGGAAGGCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278187.7
ENST00000454584.6
CDS CCA 90 bp GCTATACTGATGCATATCAGAGAGGCCAGGTCCACTGCGTACCTTTaGGCTCAGAGCAGTGCACATTATTTATCCACTTGTAATACCTCT +
Preference number: 5 (lower is better)
Translates to: AILMHIREARSTAYL*AQSSAHYLSTCNTS
Trigger: AGAGGTATTACAAGTGGATAAATAATGTGCACTGCTCTGAGCCCAAAGGTACGCAGTGGACCTGGCCTCTCTGATATGCATCAGTATAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534801.5
CDS-3UTR CAA 90 bp GGCAGCCTTCCAAGTGAATGTAAACTTTTCGGAAGTGGCCTTTCCAGTAACATAGAGGGTGCACTGGTTTaGCATGGGATCTTCTTCAAC +
Preference number: 5 (lower is better)
Translates to: GSLPSECKLFGSGLSSNIEGALV*HGIFFN
Trigger: GTTGAAGAAGATCCCATGCAAAACCAGTGCACCCTC...TATGTTACTGGAAAGGCCACTTCCGAAAAGTTTACATTCACTTGGAAGGCTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278187.7
ENST00000454584.6
ENST00000524701.5
CDS-3UTR CAA 90 bp GGCAGCCTTCCAAGTGAATGTAAACTTTTCGGAAGTGGCCTTTCCAGTAACATACGCTCCACACAGAACTaGTTTGGGCATTTGCAAGGA +
Preference number: 5 (lower is better)
Translates to: GSLPSECKLFGSGLSSNIRSTQN*FGHLQG
Trigger: TCCTTGCAAATGCCCAAACAAGTTCTGTGTGGAGCG...TATGTTACTGGAAAGGCCACTTCCGAAAAGTTTACATTCACTTGGAAGGCTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278187.7
ENST00000454584.6
ENST00000524701.5
CDS-3UTR CAA 90 bp GCCCTGTCCCAGGTATACAAGGGTATACGTAAGTCTGTAACATCATTAGCTACACGCTCCACACAGAACTaGTTTGGGCATTTGCAAGGA +
Preference number: 5 (lower is better)
Translates to: ALSQVYKGIRKSVTSLATRSTQN*FGHLQG
Trigger: TCCTTGCAAATGCCCAAACAAGTTCTGTGTGGAGCG...TGTAGCTAATGATGTTACAGACTTACGTATACCCTTGTATACCTGGGACAGGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278187.7
ENST00000454584.6
ENST00000524701.5
CDS-3UTR CAA 90 bp GTTGGAGATTTGCTTTGGATAGGGGATGTTTTGCCATCCACACGGGAGATCTGCAGCAGGCACTTTCTGTaGACTTATCTGCAAATCCTA +
Preference number: 5 (lower is better)
Translates to: VGDLLWIGDVLPSTREICSRHFL*TYLQIL
Trigger: TAGGATTTGCAGATAAGTCAACAGAAAGTGCCTGCT...GCAGATCTCCCGTGTGGATGGCAAAACATCCCCTATCCAAAGCAAATCTCCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524701.5
CDS-3UTR CAA 90 bp TCTTCCTTGGGAGAGCCGCTCCACACAGAACTTGTTTGGGCATTTGCAAGGAGGGCTGTTGGATATTTTTaGCAGCACATTATCACACTA +
Preference number: 5 (lower is better)
Translates to: SSLGEPLHTELVWAFARRAVGYF*QHIITL
Trigger: TAGTGTGATAATGTGCTGCAAAAAATATCCAACAGC...CCTCCTTGCAAATGCCCAAACAAGTTCTGTGTGGAGCGGCTCTCCCAAGGAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524701.5
CDS-3UTR CAA 90 bp GCCCTGTCCCAGGTATACAAGGGTATACGTAAGTCTGTAACATCATTAGCTACAACACACTTCTCTGGGTaGCTTGTGGAGGACCTTTTC +
Preference number: 5 (lower is better)
Translates to: ALSQVYKGIRKSVTSLATTHFSG*LVEDLF
Trigger: GAAAAGGTCCTCCACAAGCAACCCAGAGAAGTGTGT...TGTAGCTAATGATGTTACAGACTTACGTATACCCTTGTATACCTGGGACAGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524701.5
CDS GCA 90 bp ATCTTCCTTGGGAGAGCCGCTCCACACAGAACTTGTTTGGGCATTTaGAAGGAGGATCTTCAGAAATTCGTTTCACCATGTAAAGTTCAG +
Preference number: 5 (lower is better)
Translates to: IFLGRAAPHRTCLGI*KEDLQKFVSPCKVQ
Trigger: CTGAACTTTACATGGTGAAACGAATTTCTGAAGATCCTCCTTGCAAATGCCCAAACAAGTTCTGTGTGGAGCGGCTCTCCCAAGGAAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526665.1
CDS-3UTR CAA 90 bp GCCCTGTCCCAGGTATACAAGGGTATACGTAAGTCTGTAACATCATTAGCTACACCACACAGAACTTGTTaGGGCATTTGCAAGGAGGAT +
Preference number: 5 (lower is better)
Translates to: ALSQVYKGIRKSVTSLATPHRTC*GICKED
Trigger: ATCCTCCTTGCAAATGCCCAAACAAGTTCTGTGTGG...TGTAGCTAATGATGTTACAGACTTACGTATACCCTTGTATACCTGGGACAGGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278187.7
ENST00000454584.6
ENST00000524701.5
CDS-3UTR CAA 90 bp GGCAGCCTTCCAAGTGAATGTAAACTTTTCGGAAGTGGCCTTTCCAGTAACATACGGACCATGACATGTTaGTTGTGCAGCATCCTAATG +
Preference number: 5 (lower is better)
Translates to: GSLPSECKLFGSGLSSNIRTMTC*LCSILM
Trigger: CATTAGGATGCTGCACAACAAACATGTCATGGTCCG...TATGTTACTGGAAAGGCCACTTCCGAAAAGTTTACATTCACTTGGAAGGCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278187.7
ENST00000454584.6
ENST00000524701.5
CDS CCA 90 bp GCTATACTGATGCATATCAGAGAGGCCAGGTCCACTGCGTACCTTTaGGCTCAGAGCAGTGCACATTATTTATCCACTTGTAATACTTTT +
Preference number: 5 (lower is better)
Translates to: AILMHIREARSTAYL*AQSSAHYLSTCNTF
Trigger: AAAAGTATTACAAGTGGATAAATAATGTGCACTGCTCTGAGCCCAAAGGTACGCAGTGGACCTGGCCTCTCTGATATGCATCAGTATAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533092.1
CDS-3UTR CAA 90 bp GCCCTGTCCCAGGTATACAAGGGTATACGTAAGTCTGTAACATCATTAGCTACACATAGTTTCTGCAAGTaGACAGAGCAAGGCACCATT +
Preference number: 5 (lower is better)
Translates to: ALSQVYKGIRKSVTSLATHSFCK*TEQGTI
Trigger: AATGGTGCCTTGCTCTGTCAACTTGCAGAAACTATG...TGTAGCTAATGATGTTACAGACTTACGTATACCCTTGTATACCTGGGACAGGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278187.7
ENST00000454584.6
ENST00000524701.5
CDS-3UTR CAA 90 bp GCCCTGTCCCAGGTATACAAGGGTATACGTAAGTCTGTAACATCATTAGCTACAGCATCCATGCTCTCCTaGAATTTCTCCTGCATAGTT +
Preference number: 5 (lower is better)
Translates to: ALSQVYKGIRKSVTSLATASMLS*NFSCIV
Trigger: AACTATGCAGGAGAAATTCAAGGAGAGCATGGATGC...TGTAGCTAATGATGTTACAGACTTACGTATACCCTTGTATACCTGGGACAGGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278187.7
ENST00000454584.6
ENST00000524701.5
CDS-3UTR CAA 90 bp AGCCTTCCAAGTGAATGTAAACTTTTCGGAAGTGGCCTTTCCAGTAACATATTAACACACTTCTCTGGGTaGCTTGTGGAGGACCAAACC +
Preference number: 5 (lower is better)
Translates to: SLPSECKLFGSGLSSNILTHFSG*LVEDQT
Trigger: GGTTTGGTCCTCCACAAGCAACCCAGAGAAGTGTGT...TAATATGTTACTGGAAAGGCCACTTCCGAAAAGTTTACATTCACTTGGAAGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278187.7
ENST00000454584.6
CDS-3UTR CAA 90 bp CTGTACAATTTACTCGTCAAAGTATCAACGTATGTCAGCTCATGTATGAATTACCACTCGGTATCTTCCTaGGGAGAGCCGCTCCACACA +
Preference number: 5 (lower is better)
Translates to: LYNLLVKVSTYVSSCMNYHSVSS*GEPLHT
Trigger: TGTGTGGAGCGGCTCTCCCAAGGAAGATACCGAGTG...GTAATTCATACATGAGCTGACATACGTTGATACTTTGACGAGTAAATTGTACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278187.7
ENST00000454584.6
ENST00000524701.5
CDS TCA 90 bp GCATCCATGCTCTCCTTGAATTTCTCCTGCATAGTTTCTGCAAGTTaGCAGAGCAAGGCACCATTGTCCAACTTCTCCATAAAAGTTTCT +
Preference number: 5 (lower is better)
Translates to: ASMLSLNFSCIVSAS*QSKAPLSNFSIKVS
Trigger: AGAAACTTTTATGGAGAAGTTGGACAATGGTGCCTTGCTCTGTCAACTTGCAGAAACTATGCAGGAGAAATTCAAGGAGAGCATGGATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000278187.7
ENST00000454584.6
ENST00000524701.5
ENST00000528582.5
ENST00000532398.1
ENST00000533092.1
ENST00000533363.5
ENST00000534801.5
ENST00000630668.2
CDS GCA 90 bp CTTGTTAGCATCCATGCTCTCCTTGAATTTCTCCTGCATAGTTTCTaGAAGTTGACAGAGCAAGGCACCATTGTCCAACTTCTCCATAAA +
Preference number: 5 (lower is better)
Translates to: LVSIHALLEFLLHSF*KLTEQGTIVQLLHK
Trigger: TTTATGGAGAAGTTGGACAATGGTGCCTTGCTCTGTCAACTTGCAGAAACTATGCAGGAGAAATTCAAGGAGAGCATGGATGCTAACAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000278187.7
ENST00000454584.6
ENST00000524701.5
ENST00000528582.5
ENST00000532398.1
ENST00000533092.1
ENST00000533363.5
ENST00000534801.5
ENST00000630668.2
CDS-3UTR CAA 90 bp CCTTATAACTGGCAGAGACCACCAAGTAGTTATCTGGATTCATGTCCTTTAGAGCATAGTTTCTGCAAGTaGACAGAGCAAGGCACCATT +
Preference number: 5 (lower is better)
Translates to: PYNWQRPPSSYLDSCPLEHSFCK*TEQGTI
Trigger: AATGGTGCCTTGCTCTGTCAACTTGCAGAAACTATG...CTCTAAAGGACATGAATCCAGATAACTACTTGGTGGTCTCTGCCAGTTATAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524701.5
CDS-3UTR CAA 90 bp CCTTATAACTGGCAGAGACCACCAAGTAGTTATCTGGATTCATGTCCTTTAGAGGCATCCATGCTCTCCTaGAATTTCTCCTGCATAGTT +
Preference number: 5 (lower is better)
Translates to: PYNWQRPPSSYLDSCPLEASMLS*NFSCIV
Trigger: AACTATGCAGGAGAAATTCAAGGAGAGCATGGATGC...CTCTAAAGGACATGAATCCAGATAACTACTTGGTGGTCTCTGCCAGTTATAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524701.5
CDS-3UTR CAA 90 bp GGCAGCCTTCCAAGTGAATGTAAACTTTTCGGAAGTGGCCTTTCCAGTAACATAACCATGACATGTTTGTaGTGCAGCATCCTAATGAAG +
Preference number: 5 (lower is better)
Translates to: GSLPSECKLFGSGLSSNITMTCL*CSILMK
Trigger: CTTCATTAGGATGCTGCACAACAAACATGTCATGGT...TATGTTACTGGAAAGGCCACTTCCGAAAAGTTTACATTCACTTGGAAGGCTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278187.7
ENST00000454584.6
ENST00000524701.5
CDS-3UTR CAA 90 bp GCCCTGTCCCAGGTATACAAGGGTATACGTAAGTCTGTAACATCATTAGCTACAACCATGACATGTTTGTaGTGCAGCATCCTAATGAAG +
Preference number: 5 (lower is better)
Translates to: ALSQVYKGIRKSVTSLATTMTCL*CSILMK
Trigger: CTTCATTAGGATGCTGCACAACAAACATGTCATGGT...TGTAGCTAATGATGTTACAGACTTACGTATACCCTTGTATACCTGGGACAGGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278187.7
ENST00000454584.6
ENST00000524701.5
CDS-3UTR CAA 90 bp CCAAGTGAATGTAAACTTTTCGGAAGTGGCCTTTCCAGTAACATATTACTATTGTGGATAGGGGATGTTTaGCCATCCACACGGGAGATC +
Preference number: 5 (lower is better)
Translates to: PSECKLFGSGLSSNILLLWIGDV*PSTREI
Trigger: GATCTCCCGTGTGGATGGCAAAACATCCCCTATCCA...CAATAGTAATATGTTACTGGAAAGGCCACTTCCGAAAAGTTTACATTCACTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278187.7
ENST00000454584.6
ENST00000524701.5
CDS-3UTR CAA 90 bp GGCAGCCTTCCAAGTGAATGTAAACTTTTCGGAAGTGGCCTTTCCAGTAACATAAGCAGGCACTTTCTGTaGACTTATCTGCAAATCCTA +
Preference number: 5 (lower is better)
Translates to: GSLPSECKLFGSGLSSNISRHFL*TYLQIL
Trigger: TAGGATTTGCAGATAAGTCAACAGAAAGTGCCTGCT...TATGTTACTGGAAAGGCCACTTCCGAAAAGTTTACATTCACTTGGAAGGCTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278187.7
ENST00000454584.6
ENST00000524701.5
CDS-3UTR CAA 90 bp GGCAGCCTTCCAAGTGAATGTAAACTTTTCGGAAGTGGCCTTTCCAGTAACATAACCAGGATAAGAAATTaGCTGTATTGTCTCTGGCAA +
Preference number: 5 (lower is better)
Translates to: GSLPSECKLFGSGLSSNITRIRN*LYCLWQ
Trigger: TTGCCAGAGACAATACAGCAAATTTCTTATCCTGGT...TATGTTACTGGAAAGGCCACTTCCGAAAAGTTTACATTCACTTGGAAGGCTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278187.7
ENST00000454584.6
ENST00000524701.5
CDS-3UTR CAA 90 bp AACTTTTCGGAAGTGGCCTTTCCAGTAACATATTACTATTGTGAATACTCTGTAACTTCTCTGGGTTGCTaGTGGAGGACCAAACCTTCC +
Preference number: 5 (lower is better)
Translates to: NFSEVAFPVTYYYCEYSVTSLGC*WRTKPS
Trigger: GGAAGGTTTGGTCCTCCACAAGCAACCCAGAGAAGT...TACAGAGTATTCACAATAGTAATATGTTACTGGAAAGGCCACTTCCGAAAAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278187.7
ENST00000454584.6
CDS-3UTR CAA 90 bp AGCCTTCCAAGTGAATGTAAACTTTTCGGAAGTGGCCTTTCCAGTAACATATTACCACACAGAACTTGTTaGGGCATTTGCAAGGAGGAT +
Preference number: 5 (lower is better)
Translates to: SLPSECKLFGSGLSSNILPHRTC*GICKED
Trigger: ATCCTCCTTGCAAATGCCCAAACAAGTTCTGTGTGG...TAATATGTTACTGGAAAGGCCACTTCCGAAAAGTTTACATTCACTTGGAAGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278187.7
ENST00000454584.6
ENST00000524701.5
CDS-3UTR CAA 90 bp AGCCTTCCAAGTGAATGTAAACTTTTCGGAAGTGGCCTTTCCAGTAACATATTAACTTCTCTGGGTTGCTaGTGGAGGACCTTTTCTTGT +
Preference number: 5 (lower is better)
Translates to: SLPSECKLFGSGLSSNILTSLGC*WRTFSC
Trigger: ACAAGAAAAGGTCCTCCACAAGCAACCCAGAGAAGT...TAATATGTTACTGGAAAGGCCACTTCCGAAAAGTTTACATTCACTTGGAAGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524701.5
CDS-3UTR CAA 90 bp AGCCTTCCAAGTGAATGTAAACTTTTCGGAAGTGGCCTTTCCAGTAACATATTATCCTTCCCTAATAGATaGGTTAACCACAAGGCCAGA +
Preference number: 5 (lower is better)
Translates to: SLPSECKLFGSGLSSNILSFPNR*VNHKAR
Trigger: TCTGGCCTTGTGGTTAACCAATCTATTAGGGAAGGA...TAATATGTTACTGGAAAGGCCACTTCCGAAAAGTTTACATTCACTTGGAAGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278187.7
ENST00000454584.6
ENST00000524701.5
CDS-3UTR CAA 90 bp AGCCTTCCAAGTGAATGTAAACTTTTCGGAAGTGGCCTTTCCAGTAACATATTACATAGTTTCTGCAAGTaGACAGAGCAAGGCACCATT +
Preference number: 5 (lower is better)
Translates to: SLPSECKLFGSGLSSNILHSFCK*TEQGTI
Trigger: AATGGTGCCTTGCTCTGTCAACTTGCAGAAACTATG...TAATATGTTACTGGAAAGGCCACTTCCGAAAAGTTTACATTCACTTGGAAGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278187.7
ENST00000454584.6
ENST00000524701.5
CDS-3UTR CAA 90 bp GTGAATGTAAACTTTTCGGAAGTGGCCTTTCCAGTAACATATTACTATTGTGAAGAGGGTGCACTGGTTTaGCATGGGATCTTCTTCAAC +
Preference number: 5 (lower is better)
Translates to: VNVNFSEVAFPVTYYYCEEGALV*HGIFFN
Trigger: GTTGAAGAAGATCCCATGCAAAACCAGTGCACCCTC...TTCACAATAGTAATATGTTACTGGAAAGGCCACTTCCGAAAAGTTTACATTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278187.7
ENST00000454584.6
ENST00000524701.5
CDS-3UTR CAA 90 bp GTAAACTTTTCGGAAGTGGCCTTTCCAGTAACATATTACTATTGTGAATACTCTGAGGGTGCACTGGTTTaGCATGGGATCTTCTTCAAC +
Preference number: 5 (lower is better)
Translates to: VNFSEVAFPVTYYYCEYSEGALV*HGIFFN
Trigger: GTTGAAGAAGATCCCATGCAAAACCAGTGCACCCTC...AGAGTATTCACAATAGTAATATGTTACTGGAAAGGCCACTTCCGAAAAGTTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278187.7
ENST00000454584.6
ENST00000524701.5
CDS-3UTR CAA 90 bp CTGTACAATTTACTCGTCAAAGTATCAACGTATGTCAGCTCATGTATGAATTACCGCTCCACACAGAACTaGTTTGGGCATTTGCAAGGA +
Preference number: 5 (lower is better)
Translates to: LYNLLVKVSTYVSSCMNYRSTQN*FGHLQG
Trigger: TCCTTGCAAATGCCCAAACAAGTTCTGTGTGGAGCG...GTAATTCATACATGAGCTGACATACGTTGATACTTTGACGAGTAAATTGTACAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278187.7
ENST00000454584.6
ENST00000524701.5
CDS-3UTR CAA 90 bp ACAGAACTTGTTTGGGCATTTGCAAGGAGGATCTTCAGAAATTCGTTTCACTGCTTGAGAAGGAGTTCATaGATCAATATCAAAGACAGG +
Preference number: 5 (lower is better)
Translates to: TELVWAFARRIFRNSFHCLRRSS*INIKDR
Trigger: CCTGTCTTTGATATTGATCAATGAACTCCTTCTCAA...GCAGTGAAACGAATTTCTGAAGATCCTCCTTGCAAATGCCCAAACAAGTTCTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524701.5
CDS-3UTR CAA 90 bp GTGAATGTAAACTTTTCGGAAGTGGCCTTTCCAGTAACATATTACTATTGTGAACCACACAGAACTTGTTaGGGCATTTGCAAGGAGGAT +
Preference number: 5 (lower is better)
Translates to: VNVNFSEVAFPVTYYYCEPHRTC*GICKED
Trigger: ATCCTCCTTGCAAATGCCCAAACAAGTTCTGTGTGG...TTCACAATAGTAATATGTTACTGGAAAGGCCACTTCCGAAAAGTTTACATTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278187.7
ENST00000454584.6
ENST00000524701.5
CDS-3UTR CAA 90 bp CTGTACAATTTACTCGTCAAAGTATCAACGTATGTCAGCTCATGTATGAATTACCGGACCATGACATGTTaGTTGTGCAGCATCCTAATG +
Preference number: 5 (lower is better)
Translates to: LYNLLVKVSTYVSSCMNYRTMTC*LCSILM
Trigger: CATTAGGATGCTGCACAACAAACATGTCATGGTCCG...GTAATTCATACATGAGCTGACATACGTTGATACTTTGACGAGTAAATTGTACAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278187.7
ENST00000454584.6
ENST00000524701.5
CDS GCA 90 bp ATTCCTAAAGAATCTCAGCACAATATCTTAGACACTGGCTTCTTCTaGCACCCACCTCAAGAGTTATATATCAAAAGTGTGAGAGACAAT +
Preference number: 5 (lower is better)
Translates to: IPKESQHNILDTGFF*HPPQELYIKSVRDN
Trigger: ATTGTCTCTCACACTTTTGATATATAACTCTTGAGGTGGGTGGCAGAAGAAGCCAGTGTCTAAGATATTGTGCTGAGATTCTTTAGGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533092.1
CDS-3UTR CAA 90 bp CCAAGTGAATGTAAACTTTTCGGAAGTGGCCTTTCCAGTAACATATTACTATTGAGAGGAAAGCATTCCTaGAGAAGGAGTTCATTGATC +
Preference number: 5 (lower is better)
Translates to: PSECKLFGSGLSSNILLLRGKHS*RRSSLI
Trigger: GATCAATGAACTCCTTCTCAAGGAATGCTTTCCTCT...CAATAGTAATATGTTACTGGAAAGGCCACTTCCGAAAAGTTTACATTCACTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278187.7
ENST00000524701.5
CDS-3UTR CAA 90 bp AACTTTTCGGAAGTGGCCTTTCCAGTAACATATTACTATTGTGAATACTCTGTATCCTTCCCTAATAGATaGGTTAACCACAAGGCCAGA +
Preference number: 5 (lower is better)
Translates to: NFSEVAFPVTYYYCEYSVSFPNR*VNHKAR
Trigger: TCTGGCCTTGTGGTTAACCAATCTATTAGGGAAGGA...TACAGAGTATTCACAATAGTAATATGTTACTGGAAAGGCCACTTCCGAAAAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278187.7
ENST00000454584.6
ENST00000524701.5
CDS-3UTR CAA 90 bp GTGAATGTAAACTTTTCGGAAGTGGCCTTTCCAGTAACATATTACTATTGTGAAGCATCCATGCTCTCCTaGAATTTCTCCTGCATAGTT +
Preference number: 5 (lower is better)
Translates to: VNVNFSEVAFPVTYYYCEASMLS*NFSCIV
Trigger: AACTATGCAGGAGAAATTCAAGGAGAGCATGGATGC...TTCACAATAGTAATATGTTACTGGAAAGGCCACTTCCGAAAAGTTTACATTCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278187.7
ENST00000454584.6
ENST00000524701.5
CDS-3UTR CAA 90 bp AGCCTTCCAAGTGAATGTAAACTTTTCGGAAGTGGCCTTTCCAGTAACATATTAACCAGGATAAGAAATTaGCTGTATTGTCTCTGGCAA +
Preference number: 5 (lower is better)
Translates to: SLPSECKLFGSGLSSNILTRIRN*LYCLWQ
Trigger: TTGCCAGAGACAATACAGCAAATTTCTTATCCTGGT...TAATATGTTACTGGAAAGGCCACTTCCGAAAAGTTTACATTCACTTGGAAGGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278187.7
ENST00000454584.6
ENST00000524701.5
CDS-3UTR CAA 90 bp GTAAACTTTTCGGAAGTGGCCTTTCCAGTAACATATTACTATTGTGAATACTCTAGAGGAAAGCATTCCTaGAGAAGGAGTTCATTGATC +
Preference number: 5 (lower is better)
Translates to: VNFSEVAFPVTYYYCEYSRGKHS*RRSSLI
Trigger: GATCAATGAACTCCTTCTCAAGGAATGCTTTCCTCT...AGAGTATTCACAATAGTAATATGTTACTGGAAAGGCCACTTCCGAAAAGTTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278187.7
ENST00000524701.5
CDS-3UTR CAA 90 bp CTGTACAATTTACTCGTCAAAGTATCAACGTATGTCAGCTCATGTATGAATTACACCATGACATGTTTGTaGTGCAGCATCCTAATGAAG +
Preference number: 5 (lower is better)
Translates to: LYNLLVKVSTYVSSCMNYTMTCL*CSILMK
Trigger: CTTCATTAGGATGCTGCACAACAAACATGTCATGGT...GTAATTCATACATGAGCTGACATACGTTGATACTTTGACGAGTAAATTGTACAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278187.7
ENST00000454584.6
ENST00000524701.5
CDS-3UTR CAA 90 bp GTGAATGTAAACTTTTCGGAAGTGGCCTTTCCAGTAACATATTACTATTGTGAAAGCAGGCACTTTCTGTaGACTTATCTGCAAATCCTA +
Preference number: 5 (lower is better)
Translates to: VNVNFSEVAFPVTYYYCESRHFL*TYLQIL
Trigger: TAGGATTTGCAGATAAGTCAACAGAAAGTGCCTGCT...TTCACAATAGTAATATGTTACTGGAAAGGCCACTTCCGAAAAGTTTACATTCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278187.7
ENST00000454584.6
ENST00000524701.5
CDS-3UTR CAA 90 bp GTGAATGTAAACTTTTCGGAAGTGGCCTTTCCAGTAACATATTACTATTGTGAAACCAGGATAAGAAATTaGCTGTATTGTCTCTGGCAA +
Preference number: 5 (lower is better)
Translates to: VNVNFSEVAFPVTYYYCETRIRN*LYCLWQ
Trigger: TTGCCAGAGACAATACAGCAAATTTCTTATCCTGGT...TTCACAATAGTAATATGTTACTGGAAAGGCCACTTCCGAAAAGTTTACATTCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278187.7
ENST00000454584.6
ENST00000524701.5
CDS-3UTR CAA 90 bp GTAAACTTTTCGGAAGTGGCCTTTCCAGTAACATATTACTATTGTGAATACTCTTTGAGAAGGAGTTCATaGATCAATATCAAAGACAGG +
Preference number: 5 (lower is better)
Translates to: VNFSEVAFPVTYYYCEYSLRRSS*INIKDR
Trigger: CCTGTCTTTGATATTGATCAATGAACTCCTTCTCAA...AGAGTATTCACAATAGTAATATGTTACTGGAAAGGCCACTTCCGAAAAGTTTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278187.7
ENST00000524701.5
CDS-3UTR CAA 90 bp GTAAACTTTTCGGAAGTGGCCTTTCCAGTAACATATTACTATTGTGAATACTCTGCTGTTGGATATTTTTaGCAGCACATTATCACACTA +
Preference number: 5 (lower is better)
Translates to: VNFSEVAFPVTYYYCEYSAVGYF*QHIITL
Trigger: TAGTGTGATAATGTGCTGCAAAAAATATCCAACAGC...AGAGTATTCACAATAGTAATATGTTACTGGAAAGGCCACTTCCGAAAAGTTTAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000278187.7
ENST00000454584.6
ENST00000524701.5
CDS CCA 72 bp CTGCTGGCGGCTCTCAGAGGCGCTTGGGCTCCGGGCTaGGCTCCTGCAGCTTCTCGGGGCCGGCCCCCTCCA +
Preference number: 6 (lower is better)
Translates to: LLAALRGAWAPG*APAASRGRPPP
Trigger: TGGAGGGGGCCGGCCCCGAGAAGCTGCAGGAGCCCAGCCCGGAGCCCAAGCGCCTCTGAGAGCCGCCAGCAG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454584.6
CDS GCA 72 bp TCAGCACCTGGGACCCCGCCACCGTGCGCCGGGCCTTaGAGTGGGCGCGCTACCTGCGCCACATCCATCGGC +
Preference number: 6 (lower is better)
Translates to: SAPGTPPPCAGP*SGRATCATSIG
Trigger: GCCGATGGATGTGGCGCAGGTAGCGCGCCCACTGCAAGGCCCGGCGCACGGTGGCGGGGTCCCAGGTGCTGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528582.5
ENST00000648096.1
CDS CAA 72 bp GTCAGCACCTGGGACCCCGCCACCGTGCGCCGGGCCTaGCAGTGGGCGCGCTACCTGCGCCACATCCATCGG +
Preference number: 6 (lower is better)
Translates to: VSTWDPATVRRA*QWARYLRHIHR
Trigger: CCGATGGATGTGGCGCAGGTAGCGCGCCCACTGCAAGGCCCGGCGCACGGTGGCGGGGTCCCAGGTGCTGAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528582.5
ENST00000648096.1
CDS GCA 72 bp CCACCGTGCGCCGGGCCTTGCAGTGGGCGCGCTACCTaGGCCACATCCATCGGCGCTTTGGTCGGCATGGCC +
Preference number: 6 (lower is better)
Translates to: PPCAGPCSGRAT*ATSIGALVGMA
Trigger: GGCCATGCCGACCAAAGCGCCGATGGATGTGGCGCAGGTAGCGCGCCCACTGCAAGGCCCGGCGCACGGTGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528582.5
ENST00000648096.1
CDS CCA 72 bp ACCTGGGACCCCGCCACCGTGCGCCGGGCCTTGCAGTaGGCGCGCTACCTGCGCCACATCCATCGGCGCTTT +
Preference number: 6 (lower is better)
Translates to: TWDPATVRRALQ*ARYLRHIHRRF
Trigger: AAAGCGCCGATGGATGTGGCGCAGGTAGCGCGCCCACTGCAAGGCCCGGCGCACGGTGGCGGGGTCCCAGGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528582.5
ENST00000648096.1
CDS CAA 90 bp GGGCCTTGCAGTGGGCGCGCTACCTGCGCCACATCCATCGGCGCTTaGGTCGGCATGGCCCCATTCGCACGGCTCTGGAGCGGCGGCTGC +
Preference number: 6 (lower is better)
Translates to: GPCSGRATCATSIGA*VGMAPFARLWSGGC
Trigger: GCAGCCGCCGCTCCAGAGCCGTGCGAATGGGGCCATGCCGACCAAAGCGCCGATGGATGTGGCGCAGGTAGCGCGCCCACTGCAAGGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648096.1
CDS CAA 90 bp ACTACCTACGTCAGCACCTGGGACCCCGCCACCGTGCGCCGGGCCTaGCAGTGGGCGCGCTACCTGCGCCACATCCATCGGCGCTTTGGT +
Preference number: 6 (lower is better)
Translates to: TTYVSTWDPATVRRA*QWARYLRHIHRRFG
Trigger: ACCAAAGCGCCGATGGATGTGGCGCAGGTAGCGCGCCCACTGCAAGGCCCGGCGCACGGTGGCGGGGTCCCAGGTGCTGACGTAGGTAGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528582.5
ENST00000648096.1
CDS GCA 72 bp GGCATGGCCCCATTCGCACGGCTCTGGAGCGGCGGCTaGACAACCAGTGGAGGCAAGAGGGCGGCTTTGGGC +
Preference number: 6 (lower is better)
Translates to: GMAPFARLWSGG*TTSGGKRAALG
Trigger: GCCCAAAGCCGCCCTCTTGCCTCCACTGGTTGTGCAGCCGCCGCTCCAGAGCCGTGCGAATGGGGCCATGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648096.1
CDS CCA 72 bp GTGGGCGCGCTACCTGCGCCACATCCATCGGCGCTTTaGTCGGCATGGCCCCATTCGCACGGCTCTGGAGCG +
Preference number: 6 (lower is better)
Translates to: VGALPAPHPSAL*SAWPHSHGSGA
Trigger: CGCTCCAGAGCCGTGCGAATGGGGCCATGCCGACCAAAGCGCCGATGGATGTGGCGCAGGTAGCGCGCCCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648096.1
CDS CCA 72 bp CTTCTGGCGGTCTCAAGCACTACCTACGTCAGCACCTaGGACCCCGCCACCGTGCGCCGGGCCTTGCAGTGG +
Preference number: 6 (lower is better)
Translates to: LLAVSSTTYVST*DPATVRRALQW
Trigger: CCACTGCAAGGCCCGGCGCACGGTGGCGGGGTCCCAGGTGCTGACGTAGGTAGTGCTTGAGACCGCCAGAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528582.5
ENST00000648096.1
CDS CCA 72 bp CTACCTGCGCCACATCCATCGGCGCTTTGGTCGGCATaGCCCCATTCGCACGGCTCTGGAGCGGCGGCTGCA +
Preference number: 6 (lower is better)
Translates to: LPAPHPSALWSA*PHSHGSGAAAA
Trigger: TGCAGCCGCCGCTCCAGAGCCGTGCGAATGGGGCCATGCCGACCAAAGCGCCGATGGATGTGGCGCAGGTAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648096.1
CDS CAA 72 bp AGTGGGCGCGCTACCTGCGCCACATCCATCGGCGCTTaGGTCGGCATGGCCCCATTCGCACGGCTCTGGAGC +
Preference number: 6 (lower is better)
Translates to: SGRATCATSIGA*VGMAPFARLWS
Trigger: GCTCCAGAGCCGTGCGAATGGGGCCATGCCGACCAAAGCGCCGATGGATGTGGCGCAGGTAGCGCGCCCACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648096.1
CDS GCA 72 bp TATCCACTTGTAATACCCCCGCGTCCCGAGCTGGGCTaGTGGCGGCTCTCAGAGGCGCTTGGGCTCCGGGCT +
Preference number: 6 (lower is better)
Translates to: YPLVIPPRPELG*WRLSEALGLRA
Trigger: AGCCCGGAGCCCAAGCGCCTCTGAGAGCCGCCAGCAGCCCAGCTCGGGACGCGGGGGTATTACAAGTGGATA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454584.6
CDS CCA 72 bp GCGGCTGCACAACCAGTGGAGGCAAGAGGGCGGCTTTaGGCGGGGTCCAGTTCCGGGATTAGCGAACTTCCA +
Preference number: 6 (lower is better)
Translates to: AAAQPVEARGRL*AGSSSGISELP
Trigger: TGGAAGTTCGCTAATCCCGGAACTGGACCCCGCCCAAAGCCGCCCTCTTGCCTCCACTGGTTGTGCAGCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648096.1
CDS GCA 72 bp GAAGTAGGGCCTTCGCGCACCTCATGGAATCCCTTCTaGAGCACCTGGATCGCTTTTCCGAGCTTCTGGCGG +
Preference number: 6 (lower is better)
Translates to: EVGPSRTSWNPF*STWIAFPSFWR
Trigger: CCGCCAGAAGCTCGGAAAAGCGATCCAGGTGCTGCAGAAGGGATTCCATGAGGTGCGCGAAGGCCCTACTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648096.1
CDS CCA 72 bp CCCTTCTGCAGCACCTGGATCGCTTTTCCGAGCTTCTaGCGGTCTCAAGCACTACCTACGTCAGCACCTGGG +
Preference number: 6 (lower is better)
Translates to: PFCSTWIAFPSF*RSQALPTSAPG
Trigger: CCCAGGTGCTGACGTAGGTAGTGCTTGAGACCGCCAGAAGCTCGGAAAAGCGATCCAGGTGCTGCAGAAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528582.5
ENST00000648096.1
CDS CCA 72 bp AAGGTGAAAGCGGAAGTAGGGCCTTCGCGCACCTCATaGAATCCCTTCTGCAGCACCTGGATCGCTTTTCCG +
Preference number: 6 (lower is better)
Translates to: KVKAEVGPSRTS*NPFCSTWIAFP
Trigger: CGGAAAAGCGATCCAGGTGCTGCAGAAGGGATTCCATGAGGTGCGCGAAGGCCCTACTTCCGCTTTCACCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648096.1
CDS CCA 72 bp CCTTCTCTTAGGCAGTCAAAACCCAGACACCCATGTTaGAGAGAACCACCAGAGCCACCACCTTCACCGCAG +
Preference number: 6 (lower is better)
Translates to: PSLRQSKPRHPC*REPPEPPPSPQ
Trigger: CTGCGGTGAAGGTGGTGGCTCTGGTGGTTCTCTCCAACATGGGTGTCTGGGTTTTGACTGCCTAAGAGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278187.7
ENST00000524701.5
ENST00000630668.2
CDS CCA 72 bp TTCCAAAGCGAAAGGAAGCGCGGAGACGTTCATGACTaGCATCATCTCGCACGTGGTTCCGGAAATTCTCGG +
Preference number: 6 (lower is better)
Translates to: FQSERKRGDVHD*HHLARGSGNSR
Trigger: CCGAGAATTTCCGGAACCACGTGCGAGATGATGCCAGTCATGAACGTCTCCGCGCTTCCTTTCGCTTTGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648096.1
CDS GCA 72 bp TCATCTCGCACGTGGTTCCGGAAATTCTCGGTAGGATaGCCTACATCTGCTCTCCCTCCACTAAGAAGAACC +
Preference number: 6 (lower is better)
Translates to: SSRTWFRKFSVG*PTSALPPLRRT
Trigger: GGTTCTTCTTAGTGGAGGGAGAGCAGATGTAGGGCATCCTACCGAGAATTTCCGGAACCACGTGCGAGATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648096.1
CDS CAA 90 bp TGCGGTTGTCCGGGGTGTTCCGCAATAGGGATAAGGAACACATGGTaGTTTCCAGAGAATCAGAAAGTCACCCCCTGCAGTGAATACCCA +
Preference number: 6 (lower is better)
Translates to: CGCPGCSAIGIRNTW*FPENQKVTPCSEYP
Trigger: TGGGTATTCACTGCAGGGGGTGACTTTCTGATTCTCTGGAAACAACCATGTGTTCCTTATCCCTATTGCGGAACACCCCGGACAACCGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533363.5
CDS TCA 72 bp TTAGCTTCATGTCTGCTGGCTAGCCATTGGCTATACTaGTGCATATCAGAGAGGCCAGGTCCACTGCGTACC +
Preference number: 6 (lower is better)
Translates to: LASCLLASHWLY*CISERPGPLRT
Trigger: GGTACGCAGTGGACCTGGCCTCTCTGATATGCATCAGTATAGCCAATGGCTAGCCAGCAGACATGAAGCTAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000278187.7
ENST00000454584.6
ENST00000524701.5
ENST00000528582.5
ENST00000532398.1
ENST00000533092.1
ENST00000533363.5
ENST00000534801.5
ENST00000630668.2
CDS GCA 72 bp GTGGTTCCGGAAATTCTCGGTAGGATGCCCTACATCTaGTCTCCCTCCACTAAGAAGAACCTCTTTGTGTGG +
Preference number: 6 (lower is better)
Translates to: VVPEILGRMPYI*SPSTKKNLFVW
Trigger: CCACACAAAGAGGTTCTTCTTAGTGGAGGGAGAGCAGATGTAGGGCATCCTACCGAGAATTTCCGGAACCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648096.1
CDS CCA 72 bp TGTCCGGGGTGTTCCGCAATAGGGATAAGGAACACATaGTTGTTTCCAGAGAATCAGAAAGTCACCCCCTGC +
Preference number: 6 (lower is better)
Translates to: CPGCSAIGIRNT*LFPENQKVTPC
Trigger: GCAGGGGGTGACTTTCTGATTCTCTGGAAACAACCATGTGTTCCTTATCCCTATTGCGGAACACCCCGGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533363.5
CDS CAA 72 bp CCGGGGTGTTCCGCAATAGGGATAAGGAACACATGGTaGTTTCCAGAGAATCAGAAAGTCACCCCCTGCAGT +
Preference number: 6 (lower is better)
Translates to: PGCSAIGIRNTW*FPENQKVTPCS
Trigger: ACTGCAGGGGGTGACTTTCTGATTCTCTGGAAACAACCATGTGTTCCTTATCCCTATTGCGGAACACCCCGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533363.5
CDS CAA 90 bp TCTCCCACTCGGTATCTTCCTTGGGAGAGCCGCTCCACACAGAACTaGTTTGGGCATTTGCAAGGAGGATCTTCAGAAATTCGTTTCACC +
Preference number: 6 (lower is better)
Translates to: SPTRYLPWESRSTQN*FGHLQGGSSEIRFT
Trigger: GGTGAAACGAATTTCTGAAGATCCTCCTTGCAAATGCCCAAACAAGTTCTGTGTGGAGCGGCTCTCCCAAGGAAGATACCGAGTGGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526665.1
CDS TCA 72 bp ATATTTCCAAAGCGAAAGGAAGCGCGGAGACGTTCATaGCTGGCATCATCTCGCACGTGGTTCCGGAAATTC +
Preference number: 6 (lower is better)
Translates to: IFPKRKEARRRS*LASSRTWFRKF
Trigger: GAATTTCCGGAACCACGTGCGAGATGATGCCAGTCATGAACGTCTCCGCGCTTCCTTTCGCTTTGGAAATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648096.1
CDS GCA 72 bp GGCTATACTGATGCATATCAGAGAGGCCAGGTCCACTaGGTACCTTTGGGCTCAGAGCAGTGCACATTATTT +
Preference number: 6 (lower is better)
Translates to: GYTDAYQRGQVH*VPLGSEQCTLF
Trigger: AAATAATGTGCACTGCTCTGAGCCCAAAGGTACGCAGTGGACCTGGCCTCTCTGATATGCATCAGTATAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000278187.7
ENST00000454584.6
ENST00000524701.5
ENST00000528582.5
ENST00000532398.1
ENST00000533092.1
ENST00000533363.5
ENST00000534801.5
ENST00000630668.2
CDS CAA 90 bp CCACTCGGTATCTTCCTTGGGAGAGCCGCTCCACACAGAACTTGTTaGGGCATTTGCAAGGAGGATCTTCAGAAATTCGTTTCACCATGT +
Preference number: 6 (lower is better)
Translates to: PLGIFLGRAAPHRTC*GICKEDLQKFVSPC
Trigger: ACATGGTGAAACGAATTTCTGAAGATCCTCCTTGCAAATGCCCAAACAAGTTCTGTGTGGAGCGGCTCTCCCAAGGAAGATACCGAGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526665.1
CDS GCA 72 bp CCAAGCTCTAGCAGACAGAGACACACTTCTCTGGGTTaGTTGTGGAGGACCAAACCTTCCGATTCAAATAGA +
Preference number: 6 (lower is better)
Translates to: PSSSRQRHTSLG*LWRTKPSDSNR
Trigger: TCTATTTGAATCGGAAGGTTTGGTCCTCCACAAGCAACCCAGAGAAGTGTGTCTCTGTCTGCTAGAGCTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278187.7
ENST00000454584.6
ENST00000528582.5
ENST00000532398.1
ENST00000534801.5
CDS GCA 72 bp TATTTATCCACTTGTAATACCTCATGGAATCCCTTCTaGAGCACCTGGATCGCTTTTCCGAGCTTCTGGCGG +
Preference number: 6 (lower is better)
Translates to: YLSTCNTSWNPF*STWIAFPSFWR
Trigger: CCGCCAGAAGCTCGGAAAAGCGATCCAGGTGCTGCAGAAGGGATTCCATGAGGTATTACAAGTGGATAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528582.5
CDS GCA 72 bp GGGAGAGCCGCTCCACACAGAACTTGTTTGGGCATTTaGAAGGAGGATCTTCAGAAATTCGTTTCACCATGT +
Preference number: 6 (lower is better)
Translates to: GRAAPHRTCLGI*KEDLQKFVSPC
Trigger: ACATGGTGAAACGAATTTCTGAAGATCCTCCTTGCAAATGCCCAAACAAGTTCTGTGTGGAGCGGCTCTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526665.1
CDS CCA 72 bp ATGCATATCAGAGAGGCCAGGTCCACTGCGTACCTTTaGGCTCAGAGCAGTGCACATTATTTATCCACTTGT +
Preference number: 6 (lower is better)
Translates to: MHIREARSTAYL*AQSSAHYLSTC
Trigger: ACAAGTGGATAAATAATGTGCACTGCTCTGAGCCCAAAGGTACGCAGTGGACCTGGCCTCTCTGATATGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000278187.7
ENST00000454584.6
ENST00000524701.5
ENST00000528582.5
ENST00000532398.1
ENST00000533092.1
ENST00000533363.5
ENST00000534801.5
ENST00000630668.2
CDS CAA 72 bp TGGGAGAGCCGCTCCACACAGAACTTGTTTGGGCATTaGCAAGGAGGATCTTCAGAAATTCGTTTCACCATG +
Preference number: 6 (lower is better)
Translates to: WESRSTQNLFGH*QGGSSEIRFTM
Trigger: CATGGTGAAACGAATTTCTGAAGATCCTCCTTGCAAATGCCCAAACAAGTTCTGTGTGGAGCGGCTCTCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526665.1
CDS CAA 90 bp TTAAGTTGCCCAGAGTCAAGGAACACGGATAAAGACGCTGGGAGATaGACATGCATTTCGACCAATAGCATTGCAGAGAGGCGTATCATT +
Preference number: 6 (lower is better)
Translates to: LSCPESRNTDKDAGR*TCISTNSIAERRII
Trigger: AATGATACGCCTCTCTGCAATGCTATTGGTCGAAATGCATGTCAATCTCCCAGCGTCTTTATCCGTGTTCCTTGACTCTGGGCAACTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648096.1
CDS CAA 90 bp GTAGGATGCCCTACATCTGCTCTCCCTCCACTAAGAAGAACCTCTTaGTGTGGCGAAAGTAAAAGTATTAGGGCTTTTAAGTTGCCCAGA +
Preference number: 6 (lower is better)
Translates to: VGCPTSALPPLRRTS*CGESKSIRAFKLPR
Trigger: TCTGGGCAACTTAAAAGCCCTAATACTTTTACTTTCGCCACACAAAGAGGTTCTTCTTAGTGGAGGGAGAGCAGATGTAGGGCATCCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648096.1
CDS CAA 72 bp GCTCTCCTTGAATTTCTCCTGCATAGTTTCTGCAAGTaGACAGAGCAAGGCACCATTGTCCAACTTCTCCAT +
Preference number: 6 (lower is better)
Translates to: ALLEFLLHSFCK*TEQGTIVQLLH
Trigger: ATGGAGAAGTTGGACAATGGTGCCTTGCTCTGTCAACTTGCAGAAACTATGCAGGAGAAATTCAAGGAGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000278187.7
ENST00000454584.6
ENST00000524701.5
ENST00000528582.5
ENST00000532398.1
ENST00000533092.1
ENST00000533363.5
ENST00000534801.5
ENST00000630668.2
CDS TCA 72 bp CTCTCCTTGAATTTCTCCTGCATAGTTTCTGCAAGTTaGCAGAGCAAGGCACCATTGTCCAACTTCTCCATA +
Preference number: 6 (lower is better)
Translates to: LSLNFSCIVSAS*QSKAPLSNFSI
Trigger: TATGGAGAAGTTGGACAATGGTGCCTTGCTCTGTCAACTTGCAGAAACTATGCAGGAGAAATTCAAGGAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000278187.7
ENST00000454584.6
ENST00000524701.5
ENST00000528582.5
ENST00000532398.1
ENST00000533092.1
ENST00000533363.5
ENST00000534801.5
ENST00000630668.2
CDS CAA 90 bp AGCATCCATGCTCTCCTTGAATTTCTCCTGCATAGTTTCTGCAAGTaGACAGAGCAAGGCACCATTGTCCAACTTCTCCATAAAAGTTTC +
Preference number: 6 (lower is better)
Translates to: SIHALLEFLLHSFCK*TEQGTIVQLLHKSF
Trigger: GAAACTTTTATGGAGAAGTTGGACAATGGTGCCTTGCTCTGTCAACTTGCAGAAACTATGCAGGAGAAATTCAAGGAGAGCATGGATGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000278187.7
ENST00000454584.6
ENST00000524701.5
ENST00000528582.5
ENST00000532398.1
ENST00000533092.1
ENST00000533363.5
ENST00000534801.5
ENST00000630668.2
CDS CAA 72 bp CCTACATCTGCTCTCCCTCCACTAAGAAGAACCTCTTaGTGTGGCGAAAGTAAAAGTATTAGGGCTTTTAAG +
Preference number: 6 (lower is better)
Translates to: PTSALPPLRRTS*CGESKSIRAFK
Trigger: CTTAAAAGCCCTAATACTTTTACTTTCGCCACACAAAGAGGTTCTTCTTAGTGGAGGGAGAGCAGATGTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648096.1
CDS GCA 72 bp GAATCTCAGCACAATATCTTAGACACTGGCTTCTTCTaGCACCCACCTCAAGAGTTATATATCAAAAGTGTG +
Preference number: 6 (lower is better)
Translates to: ESQHNILDTGFF*HPPQELYIKSV
Trigger: CACACTTTTGATATATAACTCTTGAGGTGGGTGGCAGAAGAAGCCAGTGTCTAAGATATTGTGCTGAGATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533092.1