RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GARNL3 (Homo sapiens)

Ensembl gene IDs: ENSG00000136895

Ensembl transcript IDs: ENST00000373386.6, ENST00000373387.9, ENST00000425970.5, ENST00000429629.6, ENST00000435213.6, ENST00000439286.5, ENST00000441134.5, ENST00000444677.5, ENST00000446764.5, ENST00000453030.5, ENST00000460176.6, ENST00000463005.1, ENST00000464616.6, ENST00000478696.5, ENST00000478702.5, ENST00000481242.5, ENST00000481875.1, ENST00000487565.5, ENST00000495172.1, ENST00000496711.5, ENST00000497703.1

Found 687 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGTTACTTCAAGTCTATAATGTCTTCATCGGAGAAAGCCGTGAGCTaGAAGGGGCTGCTGCCGGAGACCGGGCTGCCCTCTCTGTCTGCC +
Preference number: 1 (lower is better)
Translates to: CYFKSIMSSSEKAVS*KGLLPETGLPSLSA
Trigger: GGCAGACAGAGAGGGCAGCCCGGTCTCCGGCAGCAGCCCCTTCCAGCTCACGGCTTTCTCCGATGAAGACATTATAGACTTGAAGTAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373386.6
3UTR GCA 90 bp CTGCTTGCTATTTCTTTGATCTCCATGCGAGACAGGGACAAGGAGTaGGTGACTGGAATGGCAGCAAGGCCCACACTGATGGGAGTGGGT +
Preference number: 1 (lower is better)
Translates to: LLAISLISMRDRDKE*VTGMAARPTLMGVG
Trigger: ACCCACTCCCATCAGTGTGGGCCTTGCTGCCATTCCAGTCACGCACTCCTTGTCCCTGTCTCGCATGGAGATCAAAGAAATAGCAAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373386.6
3UTR CCA 90 bp TATTTCTTTGATCTCCATGCGAGACAGGGACAAGGAGTGCGTGACTaGAATGGCAGCAAGGCCCACACTGATGGGAGTGGGTGGGGTGAT +
Preference number: 1 (lower is better)
Translates to: YFFDLHARQGQGVRD*NGSKAHTDGSGWGD
Trigger: ATCACCCCACCCACTCCCATCAGTGTGGGCCTTGCTGCCATTCCAGTCACGCACTCCTTGTCCCTGTCTCGCATGGAGATCAAAGAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373386.6
3UTR CCA 90 bp GAAACAAAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTaGCCGAGTGTGCAGAAGGTTTGGTCCAATAGATCACTGACAGGC +
Preference number: 1 (lower is better)
Translates to: ETKVRKDGTGHWRGN*PSVQKVWSNRSLTG
Trigger: GCCTGTCAGTGATCTATTGGACCAAACCTTCTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTTTGTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
3UTR TCA 90 bp CAGGCAGGGCAGTTGCATTCTCATCTGAAGAGCCATTTTCCACTCTaGATCTTCCAGCCCTTTGGATGGCTCCATCAGCATCACTGGAAA +
Preference number: 1 (lower is better)
Translates to: QAGQLHSHLKSHFPL*IFQPFGWLHQHHWK
Trigger: TTTCCAGTGATGCTGATGGAGCCATCCAAAGGGCTGGAAGATTCAGAGTGGAAAATGGCTCTTCAGATGAGAATGCAACTGCCCTGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441134.5
ENST00000453030.5
3UTR CCA 90 bp CCTGAACAGAAAGAAACAAAGGTCAGGAAAGATGGCACCGGACATTaGAGAGGGAACTGGCCGAGTGTGCAGAAGGTTTGGTCCAATAGA +
Preference number: 1 (lower is better)
Translates to: PEQKETKVRKDGTGH*RGNWPSVQKVWSNR
Trigger: TCTATTGGACCAAACCTTCTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTTTGTTTCTTTCTGTTCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
3UTR GCA 90 bp AAATATTTGAAATACCATCTGGTGTGGTATTCTGGGTTCTCTAAGTaGACGTCTGTTCTTCGCCAAGTACCAGGCAGGGCAGTTGCATTC +
Preference number: 1 (lower is better)
Translates to: KYLKYHLVWYSGFSK*TSVLRQVPGRAVAF
Trigger: GAATGCAACTGCCCTGCCTGGTACTTGGCGAAGAACAGACGTGCACTTAGAGAACCCAGAATACCACACCAGATGGTATTTCAAATATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441134.5
ENST00000453030.5
3UTR TCA 90 bp GAGGGAACTGGCCGAGTGTGCAGAAGGTTTGGTCCAATAGATCACTaGCAGGCTAAAAGCCACATTTTGTTGAGAAATTACATCAGAACT +
Preference number: 1 (lower is better)
Translates to: EGTGRVCRRFGPIDH*QAKSHILLRNYIRT
Trigger: AGTTCTGATGTAATTTCTCAACAAAATGTGGCTTTTAGCCTGTCAGTGATCTATTGGACCAAACCTTCTGCACACTCGGCCAGTTCCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
3UTR CAA 90 bp AACCGCTTCCGGGGTTTTGATTTGGCCTTTGGCGCTCCTTCTGACTaGGGTCCACCTTCATCCGAGAGGCCCAGTAGTTCCCTGCGGGTC +
Preference number: 2 (lower is better)
Translates to: NRFRGFDLAFGAPSD*GPPSSERPSSSLRV
Trigger: GACCCGCAGGGAACTACTGGGCCTCTCGGATGAAGGTGGACCCAAGTCAGAAGGAGCGCCAAAGGCCAAATCAAAACCCCGGAAGCGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373386.6
3UTR-3UTR GCA 90 bp AGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAGACAGGGACAAGGAGTaGGTGACTGGAATGGCAGCA +
Preference number: 2 (lower is better)
Translates to: RSGKMAPDIGEGTGRVCRDRDKE*VTGMAA
Trigger: TGCTGCCATTCCAGTCACGCACTCCTTGTCCCTGTC...TCTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373386.6
3UTR-3UTR GCA 90 bp AGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAAGGTTTGGTCGGCCCAGTAGTTCCCTaGGGGTCCTGCTTGCTATTT +
Preference number: 2 (lower is better)
Translates to: RWHRTLERELAECAEGLVGPVVP*GSCLLF
Trigger: AAATAGCAAGCAGGACCCGCAGGGAACTACTGGGCC...GACCAAACCTTCTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373386.6
3UTR CAA 90 bp TCCGAGAGGCCCAGTAGTTCCCTGCGGGTCCTGCTTGCTATTTCTTaGATCTCCATGCGAGACAGGGACAAGGAGTGCGTGACTGGAATG +
Preference number: 2 (lower is better)
Translates to: SERPSSSLRVLLAIS*ISMRDRDKECVTGM
Trigger: CATTCCAGTCACGCACTCCTTGTCCCTGTCTCGCATGGAGATCAAAGAAATAGCAAGCAGGACCCGCAGGGAACTACTGGGCCTCTCGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373386.6
3UTR CAA 90 bp CTCCTTGGCTTTCTTCTAACCGCTTCCGGGGTTTTGATTTGGCCTTaGGCGCTCCTTCTGACTTGGGTCCACCTTCATCCGAGAGGCCCA +
Preference number: 2 (lower is better)
Translates to: LLGFLLTASGVLIWP*ALLLTWVHLHPRGP
Trigger: TGGGCCTCTCGGATGAAGGTGGACCCAAGTCAGAAGGAGCGCCAAAGGCCAAATCAAAACCCCGGAAGCGGTTAGAAGAAAGCCAAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373386.6
3UTR-3UTR TCA 90 bp CATTGGAGAGGGAACTGGCCGAGTGTGCAGAAGGTTTGGTCCAATAGATCACTGGGGACAAGGAGTGCGTaGCTGGAATGGCAGCAAGGC +
Preference number: 2 (lower is better)
Translates to: HWRGNWPSVQKVWSNRSLGTRSA*LEWQQG
Trigger: GCCTTGCTGCCATTCCAGTCACGCACTCCTTGTCCC...CAGTGATCTATTGGACCAAACCTTCTGCACACTCGGCCAGTTCCCTCTCCAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373386.6
3UTR-3UTR TCA 90 bp GGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAAACTTTCCAAGGAGCCTaGTGGGATCCTGTCACTGCT +
Preference number: 2 (lower is better)
Translates to: GQERWHRTLERELAECAETFQGA*WDPVTA
Trigger: AGCAGTGACAGGATCCCATCAGGCTCCTTGGAAAGT...TTCTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373386.6
3UTR-3UTR CCA 90 bp CTTTCTTCTAACCGCTTCCGGGGTTTTGATTTGGCCTTTGGCGCTCCTTCTGACCAAGGAGTGCGTGACTaGAATGGCAGCAAGGCCCAC +
Preference number: 2 (lower is better)
Translates to: LSSNRFRGFDLAFGAPSDQGVRD*NGSKAH
Trigger: GTGGGCCTTGCTGCCATTCCAGTCACGCACTCCTTG...GTCAGAAGGAGCGCCAAAGGCCAAATCAAAACCCCGGAAGCGGTTAGAAGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373386.6
3UTR-3UTR GCA 90 bp CTGTTACTTCAAGTCTATAATGTCTTCATCGGAGAAAGCCGTGAGCTGGAAGGGGCTGCCCTCTCTGTCTaGCACAGGGTCCTGGTCAGA +
Preference number: 2 (lower is better)
Translates to: LLLQVYNVFIGESRELEGAALSV*HRVLVR
Trigger: TCTGACCAGGACCCTGTGGCAGACAGAGAGGGCAGC...CCCTTCCAGCTCACGGCTTTCTCCGATGAAGACATTATAGACTTGAAGTAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373386.6
3UTR-3UTR CCA 90 bp CTGTTACTTCAAGTCTATAATGTCTTCATCGGAGAAAGCCGTGAGCTGGAAGGGTCTGCCACAGGGTCCTaGTCAGAGCTGGCTGAGTGC +
Preference number: 2 (lower is better)
Translates to: LLLQVYNVFIGESRELEGSATGS*SELAEC
Trigger: GCACTCAGCCAGCTCTGACCAGGACCCTGTGGCAGA...CCCTTCCAGCTCACGGCTTTCTCCGATGAAGACATTATAGACTTGAAGTAACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373386.6
3UTR-3UTR CCA 90 bp CAGAAAGGGTCACGGACAAGAAGAAAGGGCTCTTCTCGGCATCGTTTCCAATGTTTCCAGCCCTTTGGATaGCTCCATCAGCATCACTGG +
Preference number: 2 (lower is better)
Translates to: QKGSRTRRKGSSRHRFQCFQPFG*LHQHHW
Trigger: CCAGTGATGCTGATGGAGCCATCCAAAGGGCTGGAA...ACATTGGAAACGATGCCGAGAAGAGCCCTTTCTTCTTGTCCGTGACCCTTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441134.5
ENST00000453030.5
3UTR-3UTR TCA 90 bp AAGAAACAAAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGATGCTTGCTATTTCTTTaGTCTCCATGCGAGACAGGG +
Preference number: 2 (lower is better)
Translates to: KKQRSGKMAPDIGEGTGRCLLFL*SPCETG
Trigger: CCCTGTCTCGCATGGAGATCAAAGAAATAGCAAGCA...TCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTTTGTTTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373386.6
3UTR-3UTR TCA 90 bp TCTGGGTTCTCTAAGTGCACGTCTGTTCTTCGCCAAGTACCAGGCAGGGCAGTTCATAATGTTTCCTACTaGAATCCCCACGTCTACAGC +
Preference number: 2 (lower is better)
Translates to: SGFSKCTSVLRQVPGRAVHNVSY*NPHVYS
Trigger: GCTGTAGACGTGGGGATTTCAGTAGGAAACATTATG...AACTGCCCTGCCTGGTACTTGGCGAAGAACAGACGTGCACTTAGAGAACCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441134.5
3UTR-3UTR CCA 90 bp GATTGTTTTGGTCAGAAAGGGTCACGGACAAGAAGAAAGGGCTCTTCTCGGCATTTCCAGCCCTTTGGATaGCTCCATCAGCATCACTGG +
Preference number: 2 (lower is better)
Translates to: DCFGQKGSRTRRKGSSRHFQPFG*LHQHHW
Trigger: CCAGTGATGCTGATGGAGCCATCCAAAGGGCTGGAA...ATGCCGAGAAGAGCCCTTTCTTCTTGTCCGTGACCCTTTCTGACCAAAACAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441134.5
ENST00000453030.5
3UTR-3UTR TCA 90 bp CTGGTGACCCCGCTTGGCTTGTTGTGTTTTCTTGTGATCAGAAGCAGTTTATTCTTCCTTTGTCTGCTCTaGGAACCAGAAGGTCCAGGG +
Preference number: 2 (lower is better)
Translates to: LVTPLGLLCFLVIRSSLFFLCLL*EPEGPG
Trigger: CCCTGGACCTTCTGGTTCTCAGAGCAGACAAAGGAA...GAATAAACTGCTTCTGATCACAAGAAAACACAACAAGCCAAGCGGGGTCACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460176.6
3UTR-3UTR GCA 90 bp GGTCAGAAAGGGTCACGGACAAGAAGAAAGGGCTCTTCTCGGCATCGTTTCCAATTTTCTCCAAAGAATTaGACGGTATTGAGGGACACG +
Preference number: 2 (lower is better)
Translates to: GQKGSRTRRKGSSRHRFQFSPKN*TVLRDT
Trigger: CGTGTCCCTCAATACCGTGCAATTCTTTGGAGAAAA...TTGGAAACGATGCCGAGAAGAGCCCTTTCTTCTTGTCCGTGACCCTTTCTGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429629.6
ENST00000441134.5
ENST00000453030.5
3UTR CAA 90 bp TTTTCTCCAAAGAATTGCACGGTATTGAGGGACACGTTGATTGTTTaGGTCAGAAAGGGTCACGGACAAGAAGAAAGGGCTCTTCTCGGC +
Preference number: 2 (lower is better)
Translates to: FSPKNCTVLRDTLIV*VRKGHGQEERALLG
Trigger: GCCGAGAAGAGCCCTTTCTTCTTGTCCGTGACCCTTTCTGACCAAAACAATCAACGTGTCCCTCAATACCGTGCAATTCTTTGGAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429629.6
ENST00000441134.5
ENST00000453030.5
3UTR-3UTR TCA 90 bp GTGGTGAGTGTTAATAGCATACAGGTGGCAGCCTTTTGTTTTCTCCAACTTGTTGCAGAGCACTTAGCCTaGAGACAAAGAGGCGAGCAT +
Preference number: 2 (lower is better)
Translates to: VVSVNSIQVAAFCFLQLVAEHLA*RQRGEH
Trigger: ATGCTCGCCTCTTTGTCTTCAGGCTAAGTGCTCTGC...AACAAGTTGGAGAAAACAAAAGGCTGCCACCTGTATGCTATTAACACTCACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460176.6
3UTR CAA 90 bp GGTACCTGTTTTTCTCCAAAGAATTGCACGGTATTGAGGGACACGTaGATTGTTTTGGTCAGAAAGGGTCACGGACAAGAAGAAAGGGCT +
Preference number: 2 (lower is better)
Translates to: GTCFSPKNCTVLRDT*IVLVRKGHGQEERA
Trigger: AGCCCTTTCTTCTTGTCCGTGACCCTTTCTGACCAAAACAATCAACGTGTCCCTCAATACCGTGCAATTCTTTGGAGAAAAACAGGTACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000429629.6
ENST00000441134.5
3UTR-3UTR GCA 90 bp CTGGGTACCTGTTTTTCTCCAAAGAATTGCACGGTATTGAGGGACACGTTGATTTTTTCTCCAAAGAATTaGACGGTATTGAGGGACACG +
Preference number: 2 (lower is better)
Translates to: LGTCFSPKNCTVLRDTLIFSPKN*TVLRDT
Trigger: CGTGTCCCTCAATACCGTGCAATTCTTTGGAGAAAA...AATCAACGTGTCCCTCAATACCGTGCAATTCTTTGGAGAAAAACAGGTACCCAG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000429629.6
ENST00000441134.5
3UTR-3UTR CCA 90 bp TTGAGGGACACGTTGATTGTTTTGGTCAGAAAGGGTCACGGACAAGAAGAAAGGGGAAGGCATATTTTCTaGGTACCTGTTTTTCTCCAA +
Preference number: 2 (lower is better)
Translates to: LRDTLIVLVRKGHGQEERGRHIF*VPVFLQ
Trigger: TTGGAGAAAAACAGGTACCCAGAAAATATGCCTTCC...CCTTTCTTCTTGTCCGTGACCCTTTCTGACCAAAACAATCAACGTGTCCCTCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000429629.6
ENST00000441134.5
3UTR CCA 72 bp GATCTCCATGCGAGACAGGGACAAGGAGTGCGTGACTaGAATGGCAGCAAGGCCCACACTGATGGGAGTGGG +
Preference number: 3 (lower is better)
Translates to: DLHARQGQGVRD*NGSKAHTDGSG
Trigger: CCCACTCCCATCAGTGTGGGCCTTGCTGCCATTCCAGTCACGCACTCCTTGTCCCTGTCTCGCATGGAGATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373386.6
3UTR CCA 72 bp AAGTCTATAATGTCTTCATCGGAGAAAGCCGTGAGCTaGAAGGGGCTGCTGCCGGAGACCGGGCTGCCCTCT +
Preference number: 3 (lower is better)
Translates to: KSIMSSSEKAVS*KGLLPETGLPS
Trigger: AGAGGGCAGCCCGGTCTCCGGCAGCAGCCCCTTCCAGCTCACGGCTTTCTCCGATGAAGACATTATAGACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373386.6
3UTR-3UTR CAA 90 bp AAGTCTATAATGTCTTCATCGGAGAAAGCCGTGAGCTGGAAGGGGCTGCTGCCGGAGTGCCCCTCAGGGTaGGCTTCGGAAGTAGAAGCA +
Preference number: 3 (lower is better)
Translates to: KSIMSSSEKAVSWKGLLPECPSG*ASEVEA
Trigger: TGCTTCTACTTCCGAAGCCAACCCTGAGGGGCACTC...CGGCAGCAGCCCCTTCCAGCTCACGGCTTTCTCCGATGAAGACATTATAGACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373386.6
3UTR-3UTR CAA 90 bp TACTTCAAGTCTATAATGTCTTCATCGGAGAAAGCCGTGAGCTGGAAGGGGCTGGGCGCTCCTTCTGACTaGGGTCCACCTTCATCCGAG +
Preference number: 3 (lower is better)
Translates to: YFKSIMSSSEKAVSWKGLGAPSD*GPPSSE
Trigger: CTCGGATGAAGGTGGACCCAAGTCAGAAGGAGCGCC...CAGCCCCTTCCAGCTCACGGCTTTCTCCGATGAAGACATTATAGACTTGAAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373386.6
3UTR-3UTR CAA 90 bp GCACGTCTGTTCTTCGCCAAGTACCAGGCAGGGCAGTTGCATTCTCATCTGAAGGAATCTTCCAGCCCTTaGGATGGCTCCATCAGCATC +
Preference number: 3 (lower is better)
Translates to: ARLFFAKYQAGQLHSHLKESSSP*DGSISI
Trigger: GATGCTGATGGAGCCATCCAAAGGGCTGGAAGATTC...CTTCAGATGAGAATGCAACTGCCCTGCCTGGTACTTGGCGAAGAACAGACGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441134.5
ENST00000453030.5
3UTR CCA 72 bp CTTGGCTTTCTTCTAACCGCTTCCGGGGTTTTGATTTaGCCTTTGGCGCTCCTTCTGACTTGGGTCCACCTT +
Preference number: 3 (lower is better)
Translates to: LGFLLTASGVLI*PLALLLTWVHL
Trigger: AAGGTGGACCCAAGTCAGAAGGAGCGCCAAAGGCCAAATCAAAACCCCGGAAGCGGTTAGAAGAAAGCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373386.6
3UTR CCA 72 bp GTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTaGCCGAGTGTGCAGAAGGTTTGGTCCAATAGATCA +
Preference number: 3 (lower is better)
Translates to: VRKDGTGHWRGN*PSVQKVWSNRS
Trigger: TGATCTATTGGACCAAACCTTCTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
3UTR-3UTR CAA 90 bp GGGTCACGGACAAGAAGAAAGGGCTCTTCTCGGCATCGTTTCCAATGTAGTTCTGAATCTTCCAGCCCTTaGGATGGCTCCATCAGCATC +
Preference number: 3 (lower is better)
Translates to: GSRTRRKGSSRHRFQCSSESSSP*DGSISI
Trigger: GATGCTGATGGAGCCATCCAAAGGGCTGGAAGATTC...AGAACTACATTGGAAACGATGCCGAGAAGAGCCCTTTCTTCTTGTCCGTGACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441134.5
ENST00000453030.5
3UTR CCA 72 bp AAAGAAACAAAGGTCAGGAAAGATGGCACCGGACATTaGAGAGGGAACTGGCCGAGTGTGCAGAAGGTTTGG +
Preference number: 3 (lower is better)
Translates to: KETKVRKDGTGH*RGNWPSVQKVW
Trigger: CCAAACCTTCTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTTTGTTTCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
3UTR GCA 72 bp AAATACCATCTGGTGTGGTATTCTGGGTTCTCTAAGTaGACGTCTGTTCTTCGCCAAGTACCAGGCAGGGCA +
Preference number: 3 (lower is better)
Translates to: KYHLVWYSGFSK*TSVLRQVPGRA
Trigger: TGCCCTGCCTGGTACTTGGCGAAGAACAGACGTGCACTTAGAGAACCCAGAATACCACACCAGATGGTATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441134.5
ENST00000453030.5
3UTR-3UTR CAA 90 bp GTCAGAAAGGGTCACGGACAAGAAGAAAGGGCTCTTCTCGGCATCGTTTCCAATGACACGTTGATTGTTTaGGTCAGAAAGGGTCACGGA +
Preference number: 3 (lower is better)
Translates to: VRKGHGQEERALLGIVSNDTLIV*VRKGHG
Trigger: TCCGTGACCCTTTCTGACCAAAACAATCAACGTGTC...ATTGGAAACGATGCCGAGAAGAGCCCTTTCTTCTTGTCCGTGACCCTTTCTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429629.6
ENST00000441134.5
ENST00000453030.5
3UTR-3UTR CAA 90 bp TTGATTGTTTTGGTCAGAAAGGGTCACGGACAAGAAGAAAGGGCTCTTCTCGGCGACACGTTGATTGTTTaGGTCAGAAAGGGTCACGGA +
Preference number: 3 (lower is better)
Translates to: LIVLVRKGHGQEERALLGDTLIV*VRKGHG
Trigger: TCCGTGACCCTTTCTGACCAAAACAATCAACGTGTC...GCCGAGAAGAGCCCTTTCTTCTTGTCCGTGACCCTTTCTGACCAAAACAATCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429629.6
ENST00000441134.5
ENST00000453030.5
3UTR-3UTR CAA 90 bp GGTCAGAAAGGGTCACGGACAAGAAGAAAGGGCTCTTCTCGGCATCGTTTCCAAGTATTGAGGGACACGTaGATTGTTTTGGTCAGAAAG +
Preference number: 3 (lower is better)
Translates to: GQKGSRTRRKGSSRHRFQVLRDT*IVLVRK
Trigger: CTTTCTGACCAAAACAATCAACGTGTCCCTCAATAC...TTGGAAACGATGCCGAGAAGAGCCCTTTCTTCTTGTCCGTGACCCTTTCTGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429629.6
ENST00000441134.5
ENST00000453030.5
3UTR-3UTR CAA 90 bp TGGTCAGAAAGGGTCACGGACAAGAAGAAAGGGCTCTTCTCGGCATCGTTTCCAAAGAATTGCACGGTATaGAGGGACACGTTGATTGTT +
Preference number: 3 (lower is better)
Translates to: WSERVTDKKKGLFSASFPKNCTV*RDTLIV
Trigger: AACAATCAACGTGTCCCTCAATACCGTGCAATTCTT...TGGAAACGATGCCGAGAAGAGCCCTTTCTTCTTGTCCGTGACCCTTTCTGACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429629.6
ENST00000441134.5
ENST00000453030.5
3UTR-3UTR CAA 90 bp TTGAGGGACACGTTGATTGTTTTGGTCAGAAAGGGTCACGGACAAGAAGAAAGGGACACGTTGATTGTTTaGGTCAGAAAGGGTCACGGA +
Preference number: 3 (lower is better)
Translates to: LRDTLIVLVRKGHGQEERDTLIV*VRKGHG
Trigger: TCCGTGACCCTTTCTGACCAAAACAATCAACGTGTC...CCTTTCTTCTTGTCCGTGACCCTTTCTGACCAAAACAATCAACGTGTCCCTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429629.6
ENST00000441134.5
ENST00000453030.5
3UTR-3UTR CAA 90 bp CAGCTCTCTGCTGTGGTGAGTGTTAATAGCATACAGGTGGCAGCCTTTTGTTTTCGAGCATCTTTTCCTTaGTCTGCTCTGAGAACCAGA +
Preference number: 3 (lower is better)
Translates to: QLSAVVSVNSIQVAAFCFRASFP*SALRTR
Trigger: TCTGGTTCTCAGAGCAGACAAAGGAAAAGATGCTCG...AAAACAAAAGGCTGCCACCTGTATGCTATTAACACTCACCACAGCAGAGAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000460176.6
3UTR-3UTR CAA 90 bp AATTGCACGGTATTGAGGGACACGTTGATTGTTTTGGTCAGAAAGGGTCACGGATTTTTCTCCAAAGAATaGCACGGTATTGAGGGACAC +
Preference number: 3 (lower is better)
Translates to: NCTVLRDTLIVLVRKGHGFFSKE*HGIEGH
Trigger: GTGTCCCTCAATACCGTGCAATTCTTTGGAGAAAAA...TCCGTGACCCTTTCTGACCAAAACAATCAACGTGTCCCTCAATACCGTGCAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000429629.6
ENST00000441134.5
ENST00000453030.5
3UTR TCA 72 bp GGCCGAGTGTGCAGAAGGTTTGGTCCAATAGATCACTaGCAGGCTAAAAGCCACATTTTGTTGAGAAATTAC +
Preference number: 3 (lower is better)
Translates to: GRVCRRFGPIDH*QAKSHILLRNY
Trigger: GTAATTTCTCAACAAAATGTGGCTTTTAGCCTGTCAGTGATCTATTGGACCAAACCTTCTGCACACTCGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
3UTR CCA 72 bp TGGCACTTAAGATGGACTTCACAGAAAGAGTTTTTGTaGGACTGTAGGGAAGGCATATTTTCTGGGTACCTG +
Preference number: 3 (lower is better)
Translates to: WHLRWTSQKEFL*DCREGIFSGYL
Trigger: CAGGTACCCAGAAAATATGCCTTCCCTACAGTCCCACAAAAACTCTTTCTGTGAAGTCCATCTTAAGTGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000429629.6
3UTR-3UTR CAA 90 bp GACCCCGCTTGGCTTGTTGTGTTTTCTTGTGATCAGAAGCAGTTTATTCCGAATACAGGTGGCAGCCTTTaGTTTTCTCCAACTTGTTTT +
Preference number: 3 (lower is better)
Translates to: DPAWLVVFSCDQKQFIPNTGGSL*FSPTCF
Trigger: AAAACAAGTTGGAGAAAACAAAAGGCTGCCACCTGT...ATTCGGAATAAACTGCTTCTGATCACAAGAAAACACAACAAGCCAAGCGGGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000460176.6
3UTR-3UTR CAA 90 bp TTCAGGATGAAAAATTTCCCTGGGGCCTTTCTCAAATTTGTCCAGATTCATGGCGTATTGAGGGACACGTaGATTGTTTTGGTCAGAAAG +
Preference number: 3 (lower is better)
Translates to: FRMKNFPGAFLKFVQIHGVLRDT*IVLVRK
Trigger: CTTTCTGACCAAAACAATCAACGTGTCCCTCAATAC...GCCATGAATCTGGACAAATTTGAGAAAGGCCCCAGGGAAATTTTTCATCCTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000429629.6
3UTR-3UTR CAA 90 bp CTGTTTTTCTCCAAAGAATTGCACGGTATTGAGGGACACGTTGATTGTTTTGGTGTATTGAGGGACACGTaGATTGTTTTGGTCAGAAAG +
Preference number: 3 (lower is better)
Translates to: LFFSKELHGIEGHVDCFGVLRDT*IVLVRK
Trigger: CTTTCTGACCAAAACAATCAACGTGTCCCTCAATAC...ACCAAAACAATCAACGTGTCCCTCAATACCGTGCAATTCTTTGGAGAAAAACAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000429629.6
ENST00000441134.5
ENST00000453030.5
CDS-3UTR CCA 90 bp TGGAAGGGGCTGCTGCCGGAGACCGGGCTGCCCTCTCTGTCTGCCACAGGGTCCAGACGCCAGCATCAGTaGAAACCAGCAAGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: WKGLLPETGLPSLSATGSRRQHQ*KPARPG
Trigger: GCCAGGCCTTGCTGGTTTCCACTGATGCTGGCGTCT...GGACCCTGTGGCAGACAGAGAGGGCAGCCCGGTCTCCGGCAGCAGCCCCTTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373386.6
CDS-3UTR GCA 90 bp GCTGGAAGGGGCTGCTGCCGGAGACCGGGCTGCCCTCTCTGTCTGCCACAGGGTTCAGAGGTCGTTCGATaGTTCTGCCCACGAGGTTTC +
Preference number: 4 (lower is better)
Translates to: AGRGCCRRPGCPLCLPQGSEVVR*FCPRGF
Trigger: GAAACCTCGTGGGCAGAAGCATCGAACGACCTCTGA...ACCCTGTGGCAGACAGAGAGGGCAGCCCGGTCTCCGGCAGCAGCCCCTTCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373386.6
CDS-3UTR CCA 90 bp TGGAAGGGGCTGCTGCCGGAGACCGGGCTGCCCTCTCTGTCTGCCACAGGGTCCTCTTCCGCGCTGACTTaGGTGACTCTGGTAAGACAT +
Preference number: 4 (lower is better)
Translates to: WKGLLPETGLPSLSATGSSSALT*VTLVRH
Trigger: ATGTCTTACCAGAGTCACCCAAGTCAGCGCGGAAGA...GGACCCTGTGGCAGACAGAGAGGGCAGCCCGGTCTCCGGCAGCAGCCCCTTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373386.6
CDS-3UTR TCA 90 bp GCTGGAAGGGGCTGCTGCCGGAGACCGGGCTGCCCTCTCTGTCTGCCACAGGGTAGCTCTCTGCTGTGGTaGGTGTTAATAGCATACAGG +
Preference number: 4 (lower is better)
Translates to: AGRGCCRRPGCPLCLPQGSSLLW*VLIAYR
Trigger: CCTGTATGCTATTAACACTCACCACAGCAGAGAGCT...ACCCTGTGGCAGACAGAGAGGGCAGCCCGGTCTCCGGCAGCAGCCCCTTCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373386.6
CDS-3UTR TCA 90 bp GGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAACGGCCCGGGGGTGTCTaGGGAGAATTTCGGGCACTG +
Preference number: 4 (lower is better)
Translates to: GQERWHRTLERELAECAERPGGV*GEFRAL
Trigger: CAGTGCCCGAAATTCTCCTCAGACACCCCCGGGCCG...TTCTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373387.9
ENST00000435213.6
CDS-3UTR GCA 90 bp GCTGGAAGGGGCTGCTGCCGGAGACCGGGCTGCCCTCTCTGTCTGCCACAGGGTTCAAGCACATGCATTTaGTTCACTGGCAGAGTTCTG +
Preference number: 4 (lower is better)
Translates to: AGRGCCRRPGCPLCLPQGSSTCI*FTGRVL
Trigger: CAGAACTCTGCCAGTGAAGCAAATGCATGTGCTTGA...ACCCTGTGGCAGACAGAGAGGGCAGCCCGGTCTCCGGCAGCAGCCCCTTCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373386.6
CDS-3UTR GCA 90 bp GCACGTCTGTTCTTCGCCAAGTACCAGGCAGGGCAGTTGCATTCTCATCTGAAGTTGGGCTCTCGAAGCTaGACCCCCTGCGCCGCAGCG +
Preference number: 4 (lower is better)
Translates to: ARLFFAKYQAGQLHSHLKLGSRS*TPCAAA
Trigger: CGCTGCGGCGCAGGGGGTGCAGCTTCGAGAGCCCAA...CTTCAGATGAGAATGCAACTGCCCTGCCTGGTACTTGGCGAAGAACAGACGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441134.5
CDS-3UTR CCA 90 bp CAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAAGGTGAGAAAGCCGTGAGCTaGAAGGGGCTGCTGCCGGAG +
Preference number: 4 (lower is better)
Translates to: QERWHRTLERELAECAEGEKAVS*KGLLPE
Trigger: CTCCGGCAGCAGCCCCTTCCAGCTCACGGCTTTCTC...ACCTTCTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR TCA 90 bp CCTTCTGACTTGGGTCCACCTTCATCCGAGAGGCCCAGTAGTTCCCTGCGGGTCACAATGAGGTGCTGGTaGCCCCGCTTGGCTTGTTGT +
Preference number: 4 (lower is better)
Translates to: PSDLGPPSSERPSSSLRVTMRCW*PRLACC
Trigger: ACAACAAGCCAAGCGGGGTCACCAGCACCTCATTGT...GACCCGCAGGGAACTACTGGGCCTCTCGGATGAAGGTGGACCCAAGTCAGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373386.6
CDS-3UTR TCA 90 bp AGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGACCACGTGGTGCAGCCTaGAGGCTTCTCCTGTGCTCT +
Preference number: 4 (lower is better)
Translates to: RSGKMAPDIGEGTGRVCRPRGAA*RLLLCS
Trigger: AGAGCACAGGAGAAGCCTTCAGGCTGCACCACGTGG...TCTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR TCA 90 bp AAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGCCATGGAGTCGGTGGTaGAGGCCAGGAGATACGGGA +
Preference number: 4 (lower is better)
Translates to: KVRKDGTGHWRGNWPSVQPWSRW*RPGDTG
Trigger: TCCCGTATCTCCTGGCCTTCACCACCGACTCCATGG...CTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR TCA 90 bp TTTGGCGCTCCTTCTGACTTGGGTCCACCTTCATCCGAGAGGCCCAGTAGTTCCGGGACAAGGAGTGCGTaGCTGGAATGGCAGCAAGGC +
Preference number: 4 (lower is better)
Translates to: FGAPSDLGPPSSERPSSSGTRSA*LEWQQG
Trigger: GCCTTGCTGCCATTCCAGTCACGCACTCCTTGTCCC...GGAACTACTGGGCCTCTCGGATGAAGGTGGACCCAAGTCAGAAGGAGCGCCAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373386.6
CDS-3UTR TCA 90 bp GGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAACCGCTTCCGGGGTTTTaGTTTGGCCTTTGGCGCTCC +
Preference number: 4 (lower is better)
Translates to: GQERWHRTLERELAECAEPLPGF*FGLWRS
Trigger: GGAGCGCCAAAGGCCAAATCAAAACCCCGGAAGCGG...TTCTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR GCA 90 bp AGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAAGGTTCAGCTGCGGCACGACTaGAGTGTGGACCAGGTTCCC +
Preference number: 4 (lower is better)
Translates to: RKDGTGHWRGNWPSVQKVQLRHD*SVDQVP
Trigger: GGGAACCTGGTCCACACTGCAGTCGTGCCGCAGCTG...AACCTTCTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR GCA 90 bp TTTGGCGCTCCTTCTGACTTGGGTCCACCTTCATCCGAGAGGCCCAGTAGTTCCGCTGCCCTCTCTGTCTaGCACAGGGTCCTGGTCAGA +
Preference number: 4 (lower is better)
Translates to: FGAPSDLGPPSSERPSSSAALSV*HRVLVR
Trigger: TCTGACCAGGACCCTGTGGCAGACAGAGAGGGCAGC...GGAACTACTGGGCCTCTCGGATGAAGGTGGACCCAAGTCAGAAGGAGCGCCAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373386.6
CDS-3UTR GCA 90 bp CCTTTGGATGGCTCCATCAGCATCACTGGAAATAAGCAGCTCCACAGATCCATACGAAGCTGCACCCCCTaGGCCGCAGCGCCGCCCTCT +
Preference number: 4 (lower is better)
Translates to: PLDGSISITGNKQLHRSIRSCTP*AAAPPS
Trigger: AGAGGGCGGCGCTGCGGCGCAGGGGGTGCAGCTTCG...TATGGATCTGTGGAGCTGCTTATTTCCAGTGATGCTGATGGAGCCATCCAAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441134.5
CDS-3UTR CCA 90 bp CAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAAGGTGGCACGACTGCAGTGTaGACCAGGTTCCCGTTCACC +
Preference number: 4 (lower is better)
Translates to: QERWHRTLERELAECAEGGTTAV*TRFPFT
Trigger: GGTGAACGGGAACCTGGTCCACACTGCAGTCGTGCC...ACCTTCTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp AAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGGGCACGACTGCAGTGTaGACCAGGTTCCCGTTCACC +
Preference number: 4 (lower is better)
Translates to: KVRKDGTGHWRGNWPSVQGTTAV*TRFPFT
Trigger: GGTGAACGGGAACCTGGTCCACACTGCAGTCGTGCC...CTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR TCA 90 bp AGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAAGGTTCCACGTGGTGCAGCCTaGAGGCTTCTCCTGTGCTCT +
Preference number: 4 (lower is better)
Translates to: RKDGTGHWRGNWPSVQKVPRGAA*RLLLCS
Trigger: AGAGCACAGGAGAAGCCTTCAGGCTGCACCACGTGG...AACCTTCTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR TCA 90 bp AAAGAAACAAAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGCGGCCCGGGGGTGTCTaGGGAGAATTTCGGGCACTG +
Preference number: 4 (lower is better)
Translates to: KETKVRKDGTGHWRGNWPRPGGV*GEFRAL
Trigger: CAGTGCCCGAAATTCTCCTCAGACACCCCCGGGCCG...CGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTTTGTTTCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373387.9
ENST00000435213.6
CDS-3UTR GCA 90 bp CAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAAGGTCTGCTCTTCCCAGCCTaGTTCCCCTCAAGGCCCTTT +
Preference number: 4 (lower is better)
Translates to: QERWHRTLERELAECAEGLLFPA*FPSRPF
Trigger: AAAGGGCCTTGAGGGGAAGCAGGCTGGGAAGAGCAG...ACCTTCTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR GCA 90 bp CAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAAGGTCTCTGCAGTCAGACCTaGTCTTCCCAGCCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: QERWHRTLERELAECAEGLCSQT*SSQPAS
Trigger: GGAAGCAGGCTGGGAAGAGCAGGTCTGACTGCAGAG...ACCTTCTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR GCA 90 bp AGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAAGGTTTGGTCTGGCCCCCTTGGAGCTaGCTCCAGATGAGACCTCAT +
Preference number: 4 (lower is better)
Translates to: RWHRTLERELAECAEGLVWPPWS*LQMRPH
Trigger: ATGAGGTCTCATCTGGAGGCAGCTCCAAGGGGGCCA...GACCAAACCTTCTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373387.9
ENST00000435213.6
CDS-3UTR GCA 90 bp CATTGGAGAGGGAACTGGCCGAGTGTGCAGAAGGTTTGGTCCAATAGATCACTGTGCCGGAGACCGGGCTaGCCTCTCTGTCTGCCACAG +
Preference number: 4 (lower is better)
Translates to: HWRGNWPSVQKVWSNRSLCRRPG*PLCLPQ
Trigger: CTGTGGCAGACAGAGAGGGCAGCCCGGTCTCCGGCA...CAGTGATCTATTGGACCAAACCTTCTGCACACTCGGCCAGTTCCCTCTCCAATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR GCA 90 bp GGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAAGGTTTGGTCCAATAGATCATGCCGGAGACCGGGCTaGCCTCTCTGTCTGCCACAG +
Preference number: 4 (lower is better)
Translates to: GHWRGNWPSVQKVWSNRSCRRPG*PLCLPQ
Trigger: CTGTGGCAGACAGAGAGGGCAGCCCGGTCTCCGGCA...TGATCTATTGGACCAAACCTTCTGCACACTCGGCCAGTTCCCTCTCCAATGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp TGGAAGGGGCTGCTGCCGGAGACCGGGCTGCCCTCTCTGTCTGCCACAGGGTCCGGAAGGCATATTTTCTaGGTACCTGTTTTTCTCCAA +
Preference number: 4 (lower is better)
Translates to: WKGLLPETGLPSLSATGSGRHIF*VPVFLQ
Trigger: TTGGAGAAAAACAGGTACCCAGAAAATATGCCTTCC...GGACCCTGTGGCAGACAGAGAGGGCAGCCCGGTCTCCGGCAGCAGCCCCTTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373386.6
CDS-3UTR CCA 90 bp CAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAAGGTAGACGCCAGCATCAGTaGAAACCAGCAAGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: QERWHRTLERELAECAEGRRQHQ*KPARPG
Trigger: GCCAGGCCTTGCTGGTTTCCACTGATGCTGGCGTCT...ACCTTCTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp AGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGACAAGGAGTGCGTGACTaGAATGGCAGCAAGGCCCAC +
Preference number: 4 (lower is better)
Translates to: RSGKMAPDIGEGTGRVCRQGVRD*NGSKAH
Trigger: GTGGGCCTTGCTGCCATTCCAGTCACGCACTCCTTG...TCTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp CAAAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCCAAGGAGTGCGTGACTaGAATGGCAGCAAGGCCCAC +
Preference number: 4 (lower is better)
Translates to: QRSGKMAPDIGEGTGRVCQGVRD*NGSKAH
Trigger: GTGGGCCTTGCTGCCATTCCAGTCACGCACTCCTTG...GCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR TCA 90 bp AGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAACAATGAGGTGCTGGTaGCCCCGCTTGGCTTGTTGT +
Preference number: 4 (lower is better)
Translates to: RSGKMAPDIGEGTGRVCRTMRCW*PRLACC
Trigger: ACAACAAGCCAAGCGGGGTCACCAGCACCTCATTGT...TCTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR TCA 90 bp AGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAAGGTTTGGTCCTTTGGCGCTCCTTCTaGCTTGGGTCCACCTTCATC +
Preference number: 4 (lower is better)
Translates to: RWHRTLERELAECAEGLVLWRSF*LGSTFI
Trigger: GATGAAGGTGGACCCAAGTCAGAAGGAGCGCCAAAG...GACCAAACCTTCTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR TCA 90 bp AACAAAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTCCGCTTCCGGGGTTTTaGTTTGGCCTTTGGCGCTCC +
Preference number: 4 (lower is better)
Translates to: NKGQERWHRTLERELAECPLPGF*FGLWRS
Trigger: GGAGCGCCAAAGGCCAAATCAAAACCCCGGAAGCGG...ACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTTTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR TCA 90 bp AAAGAAACAAAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGCATCGGAGAAAGCCGTaGGCTGGAAGGGGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: KETKVRKDGTGHWRGNWPHRRKP*AGRGCC
Trigger: GCAGCAGCCCCTTCCAGCTCACGGCTTTCTCCGATG...CGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTTTGTTTCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR TCA 90 bp GGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAAGGTTTGGTCCAATAGATCACATCGGAGAAAGCCGTaGGCTGGAAGGGGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: GHWRGNWPSVQKVWSNRSHRRKP*AGRGCC
Trigger: GCAGCAGCCCCTTCCAGCTCACGGCTTTCTCCGATG...TGATCTATTGGACCAAACCTTCTGCACACTCGGCCAGTTCCCTCTCCAATGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR GCA 90 bp CACCTTCATCCGAGAGGCCCAGTAGTTCCCTGCGGGTCCTGCTTGCTATTTCTTCTGCTCTTCCCAGCCTaGTTCCCCTCAAGGCCCTTT +
Preference number: 4 (lower is better)
Translates to: HLHPRGPVVPCGSCLLFLLLFPA*FPSRPF
Trigger: AAAGGGCCTTGAGGGGAAGCAGGCTGGGAAGAGCAG...AAGAAATAGCAAGCAGGACCCGCAGGGAACTACTGGGCCTCTCGGATGAAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373386.6
CDS-3UTR GCA 90 bp CACCTTCATCCGAGAGGCCCAGTAGTTCCCTGCGGGTCCTGCTTGCTATTTCTTCTCTGCAGTCAGACCTaGTCTTCCCAGCCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: HLHPRGPVVPCGSCLLFLLCSQT*SSQPAS
Trigger: GGAAGCAGGCTGGGAAGAGCAGGTCTGACTGCAGAG...AAGAAATAGCAAGCAGGACCCGCAGGGAACTACTGGGCCTCTCGGATGAAGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373386.6
CDS-3UTR GCA 90 bp GGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAAGGTTTGGTCCAATAGATCACAGCTGCGGCACGACTaGAGTGTGGACCAGGTTCCC +
Preference number: 4 (lower is better)
Translates to: GHWRGNWPSVQKVWSNRSQLRHD*SVDQVP
Trigger: GGGAACCTGGTCCACACTGCAGTCGTGCCGCAGCTG...TGATCTATTGGACCAAACCTTCTGCACACTCGGCCAGTTCCCTCTCCAATGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR GCA 90 bp AAAGAAACAAAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGCAGCTGCGGCACGACTaGAGTGTGGACCAGGTTCCC +
Preference number: 4 (lower is better)
Translates to: KETKVRKDGTGHWRGNWPQLRHD*SVDQVP
Trigger: GGGAACCTGGTCCACACTGCAGTCGTGCCGCAGCTG...CGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTTTGTTTCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR GCA 90 bp CAAAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCGACAGGGACAAGGAGTaGGTGACTGGAATGGCAGCA +
Preference number: 4 (lower is better)
Translates to: QRSGKMAPDIGEGTGRVCDRDKE*VTGMAA
Trigger: TGCTGCCATTCCAGTCACGCACTCCTTGTCCCTGTC...GCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp TCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAAGGGTCTGTAAACACTGGTaGAGTTGGCAAGGGAGGGCC +
Preference number: 4 (lower is better)
Translates to: SGKMAPDIGEGTGRVCRRVCKHW*SWQGRA
Trigger: GGCCCTCCCTTGCCAACTCCACCAGTGTTTACAGAC...CCTTCTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp CCTTCTGACTTGGGTCCACCTTCATCCGAGAGGCCCAGTAGTTCCCTGCGGGTCTTACTGCAGAAACACTaGGGCTCCCACGGCTCTTTT +
Preference number: 4 (lower is better)
Translates to: PSDLGPPSSERPSSSLRVLLQKH*GSHGSF
Trigger: AAAAGAGCCGTGGGAGCCCCAGTGTTTCTGCAGTAA...GACCCGCAGGGAACTACTGGGCCTCTCGGATGAAGGTGGACCCAAGTCAGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373386.6
CDS-3UTR CCA 90 bp AGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAAGGTTCTGTTGGCCTCCACGTaGTGCAGCCTGAAGGCTTCT +
Preference number: 4 (lower is better)
Translates to: RKDGTGHWRGNWPSVQKVLLAST*CSLKAS
Trigger: AGAAGCCTTCAGGCTGCACCACGTGGAGGCCAACAG...AACCTTCTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp CAAAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCGGAAGAAGGAAATACTaGAGTATCTCGGCCCGGGGG +
Preference number: 4 (lower is better)
Translates to: QRSGKMAPDIGEGTGRVCGRRKY*SISARG
Trigger: CCCCCGGGCCGAGATACTCCAGTATTTCCTTCTTCC...GCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp AAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGGGCTTGGGGCCTCCTTaGCTTTCTTCTAACCGCTTC +
Preference number: 4 (lower is better)
Translates to: KVRKDGTGHWRGNWPSVQGLGPP*LSSNRF
Trigger: GAAGCGGTTAGAAGAAAGCCAAGGAGGCCCCAAGCC...CTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp TGGAGAGGGAACTGGCCGAGTGTGCAGAAGGTTTGGTCCAATAGATCACTGACAGGTCCTGGTCAGAGCTaGCTGAGTGCCCCTCAGGGT +
Preference number: 4 (lower is better)
Translates to: WRGNWPSVQKVWSNRSLTGPGQS*LSAPQG
Trigger: ACCCTGAGGGGCACTCAGCCAGCTCTGACCAGGACC...TGTCAGTGATCTATTGGACCAAACCTTCTGCACACTCGGCCAGTTCCCTCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp AAAGAAACAAAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGGGTCCTGGTCAGAGCTaGCTGAGTGCCCCTCAGGGT +
Preference number: 4 (lower is better)
Translates to: KETKVRKDGTGHWRGNWPGPGQS*LSAPQG
Trigger: ACCCTGAGGGGCACTCAGCCAGCTCTGACCAGGACC...CGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTTTGTTTCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp AAGTCTATAATGTCTTCATCGGAGAAAGCCGTGAGCTGGAAGGGGCTGCTGCCGTCTGCCACAGGGTCCTaGTCAGAGCTGGCTGAGTGC +
Preference number: 4 (lower is better)
Translates to: KSIMSSSEKAVSWKGLLPSATGS*SELAEC
Trigger: GCACTCAGCCAGCTCTGACCAGGACCCTGTGGCAGA...CGGCAGCAGCCCCTTCCAGCTCACGGCTTTCTCCGATGAAGACATTATAGACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373386.6
CDS-3UTR CCA 90 bp TGGAGAGGGAACTGGCCGAGTGTGCAGAAGGTTTGGTCCAATAGATCACTGACAGAGAAAGCCGTGAGCTaGAAGGGGCTGCTGCCGGAG +
Preference number: 4 (lower is better)
Translates to: WRGNWPSVQKVWSNRSLTEKAVS*KGLLPE
Trigger: CTCCGGCAGCAGCCCCTTCCAGCTCACGGCTTTCTC...TGTCAGTGATCTATTGGACCAAACCTTCTGCACACTCGGCCAGTTCCCTCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
3UTR CAA 72 bp CGGGGTTTTGATTTGGCCTTTGGCGCTCCTTCTGACTaGGGTCCACCTTCATCCGAGAGGCCCAGTAGTTCC +
Preference number: 4 (lower is better)
Translates to: RGFDLAFGAPSD*GPPSSERPSSS
Trigger: GGAACTACTGGGCCTCTCGGATGAAGGTGGACCCAAGTCAGAAGGAGCGCCAAAGGCCAAATCAAAACCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373386.6
CDS-3UTR TCA 90 bp TCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAAGGGTCAAACACGGGCACTaGTGGAAGGTCATCATCCAC +
Preference number: 4 (lower is better)
Translates to: SGKMAPDIGEGTGRVCRRVKHGH*WKVIIH
Trigger: GTGGATGATGACCTTCCATCAGTGCCCGTGTTTGAC...CCTTCTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR TCA 90 bp AGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGATTCCTTTGTCTGCTCTaGGAACCAGAAGGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: RSGKMAPDIGEGTGRVCRFLCLL*EPEGPG
Trigger: CCCTGGACCTTCTGGTTCTCAGAGCAGACAAAGGAA...TCTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR TCA 90 bp GGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAAGGTTTGGTCCAATAGATCAGGGACAAGGAGTGCGTaGCTGGAATGGCAGCAAGGC +
Preference number: 4 (lower is better)
Translates to: GHWRGNWPSVQKVWSNRSGTRSA*LEWQQG
Trigger: GCCTTGCTGCCATTCCAGTCACGCACTCCTTGTCCC...TGATCTATTGGACCAAACCTTCTGCACACTCGGCCAGTTCCCTCTCCAATGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR GCA 90 bp AACAAAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCTATGGAACAGACTTaGAGTGCCCCGGCTCCTCAC +
Preference number: 4 (lower is better)
Translates to: NKGQERWHRTLERELAECAMEQT*SAPAPH
Trigger: GTGAGGAGCCGGGGCACTGCAAGTCTGTTCCATAGC...ACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTTTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373387.9
CDS-3UTR GCA 90 bp AAGAAACAAAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGACTGGCCCCAGGGATCTaGACACACGGCTTCATGAGG +
Preference number: 4 (lower is better)
Translates to: KKQRSGKMAPDIGEGTGRLAPGI*THGFMR
Trigger: CCTCATGAAGCCGTGTGTGCAGATCCCTGGGGCCAG...TCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTTTGTTTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR GCA 90 bp CAAAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCTCAGAGGTCGTTCGATaGTTCTGCCCACGAGGTTTC +
Preference number: 4 (lower is better)
Translates to: QRSGKMAPDIGEGTGRVCSEVVR*FCPRGF
Trigger: GAAACCTCGTGGGCAGAAGCATCGAACGACCTCTGA...GCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR GCA 90 bp CCTTCTGACTTGGGTCCACCTTCATCCGAGAGGCCCAGTAGTTCCCTGCGGGTCCCTGCGGGTCCTGCTTaGTATTTCTTTGATCTCCAT +
Preference number: 4 (lower is better)
Translates to: PSDLGPPSSERPSSSLRVPAGPA*YFFDLH
Trigger: ATGGAGATCAAAGAAATAGCAAGCAGGACCCGCAGG...GACCCGCAGGGAACTACTGGGCCTCTCGGATGAAGGTGGACCCAAGTCAGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373386.6
CDS-3UTR CCA 90 bp CAAAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCTTCCAGCCCTTTGGATaGCTCCATCAGCATCACTGG +
Preference number: 4 (lower is better)
Translates to: QRSGKMAPDIGEGTGRVCFQPFG*LHQHHW
Trigger: CCAGTGATGCTGATGGAGCCATCCAAAGGGCTGGAA...GCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp AGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAAGGTTTGGTCAAACACTGGTGGAGTTaGCAAGGGAGGGCCAAAGAG +
Preference number: 4 (lower is better)
Translates to: RWHRTLERELAECAEGLVKHWWS*QGRAKE
Trigger: CTCTTTGGCCCTCCCTTGCCAACTCCACCAGTGTTT...GACCAAACCTTCTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp GGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAAAAACACTGGTGGAGTTaGCAAGGGAGGGCCAAAGAG +
Preference number: 4 (lower is better)
Translates to: GQERWHRTLERELAECAEKHWWS*QGRAKE
Trigger: CTCTTTGGCCCTCCCTTGCCAACTCCACCAGTGTTT...TTCTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp TCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAAGGGTGGTCTGTAAACACTaGTGGAGTTGGCAAGGGAGG +
Preference number: 4 (lower is better)
Translates to: SGKMAPDIGEGTGRVCRRVVCKH*WSWQGR
Trigger: CCTCCCTTGCCAACTCCACCAGTGTTTACAGACCAC...CCTTCTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp GGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAAGTACGCCGACGTTTCTaGGCAAATGTTGGGGTTTCC +
Preference number: 4 (lower is better)
Translates to: GQERWHRTLERELAECAEVRRRF*ANVGVS
Trigger: GGAAACCCCAACATTTGCCCAGAAACGTCGGCGTAC...TTCTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp AGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAAGGTTTGGTCGTACGCCGACGTTTCTaGGCAAATGTTGGGGTTTCC +
Preference number: 4 (lower is better)
Translates to: RWHRTLERELAECAEGLVVRRRF*ANVGVS
Trigger: GGAAACCCCAACATTTGCCCAGAAACGTCGGCGTAC...GACCAAACCTTCTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp AAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGTCCGGGGTTTTGATTTaGCCTTTGGCGCTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: KVRKDGTGHWRGNWPSVQSGVLI*PLALLL
Trigger: CAGAAGGAGCGCCAAAGGCCAAATCAAAACCCCGGA...CTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp CAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAAGGTTCCGGGGTTTTGATTTaGCCTTTGGCGCTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: QERWHRTLERELAECAEGSGVLI*PLALLL
Trigger: CAGAAGGAGCGCCAAAGGCCAAATCAAAACCCCGGA...ACCTTCTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp TCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAAGGCATTGGAGAGGGAACTaGCCGAGTGTGCAGAAGGTT +
Preference number: 4 (lower is better)
Translates to: SGKMAPDIGEGTGRVCRRHWRGN*PSVQKV
Trigger: AACCTTCTGCACACTCGGCCAGTTCCCTCTCCAATG...CCTTCTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp TTGATTGTTTTGGTCAGAAAGGGTCACGGACAAGAAGAAAGGGCTCTTCTCGGCAGTGGGCCTGGAGGCTaGGCAGCTGTCCTTGGGCTC +
Preference number: 4 (lower is better)
Translates to: LIVLVRKGHGQEERALLGSGPGG*AAVLGL
Trigger: GAGCCCAAGGACAGCTGCCCAGCCTCCAGGCCCACT...GCCGAGAAGAGCCCTTTCTTCTTGTCCGTGACCCTTTCTGACCAAAACAATCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441134.5
CDS-3UTR CCA 90 bp TGGTGTGGTATTCTGGGTTCTCTAAGTGCACGTCTGTTCTTCGCCAAGTACCAGAGTGGGCCTGGAGGCTaGGCAGCTGTCCCCAAACCT +
Preference number: 4 (lower is better)
Translates to: WCGILGSLSARLFFAKYQSGPGG*AAVPKP
Trigger: AGGTTTGGGGACAGCTGCCCAGCCTCCAGGCCCACT...CTGGTACTTGGCGAAGAACAGACGTGCACTTAGAGAACCCAGAATACCACACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453030.5
3UTR CAA 72 bp CCCAGTAGTTCCCTGCGGGTCCTGCTTGCTATTTCTTaGATCTCCATGCGAGACAGGGACAAGGAGTGCGTG +
Preference number: 4 (lower is better)
Translates to: PSSSLRVLLAIS*ISMRDRDKECV
Trigger: CACGCACTCCTTGTCCCTGTCTCGCATGGAGATCAAAGAAATAGCAAGCAGGACCCGCAGGGAACTACTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373386.6
3UTR CAA 72 bp GGCCTCCTTGGCTTTCTTCTAACCGCTTCCGGGGTTTaGATTTGGCCTTTGGCGCTCCTTCTGACTTGGGTC +
Preference number: 4 (lower is better)
Translates to: GLLGFLLTASGV*IWPLALLLTWV
Trigger: GACCCAAGTCAGAAGGAGCGCCAAAGGCCAAATCAAAACCCCGGAAGCGGTTAGAAGAAAGCCAAGGAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373386.6
CDS-3UTR TCA 90 bp ATTTCTTTGATCTCCATGCGAGACAGGGACAAGGAGTGCGTGACTGGAATGGCACCATGGAGTCGGTGGTaGAGGCCAGGAGATACGGGA +
Preference number: 4 (lower is better)
Translates to: ISLISMRDRDKECVTGMAPWSRW*RPGDTG
Trigger: TCCCGTATCTCCTGGCCTTCACCACCGACTCCATGG...TGCCATTCCAGTCACGCACTCCTTGTCCCTGTCTCGCATGGAGATCAAAGAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373386.6
CDS-3UTR TCA 90 bp CAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAAGGTCAGCTGCAGTTGCTGTaGAGTATATATCCGACCTGG +
Preference number: 4 (lower is better)
Translates to: QERWHRTLERELAECAEGQLQLL*SIYPTW
Trigger: CCAGGTCGGATATATACTTCACAGCAACTGCAGCTG...ACCTTCTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373387.9
ENST00000435213.6
CDS-3UTR TCA 90 bp ATTTCTTTGATCTCCATGCGAGACAGGGACAAGGAGTGCGTGACTGGAATGGCACCGCTTCCGGGGTTTTaGTTTGGCCTTTGGCGCTCC +
Preference number: 4 (lower is better)
Translates to: ISLISMRDRDKECVTGMAPLPGF*FGLWRS
Trigger: GGAGCGCCAAAGGCCAAATCAAAACCCCGGAAGCGG...TGCCATTCCAGTCACGCACTCCTTGTCCCTGTCTCGCATGGAGATCAAAGAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373386.6
CDS-3UTR TCA 90 bp AAAGAAACAAAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGCCTGTCACTGCTAGATaGCCTCACTGCCCCTGGCTT +
Preference number: 4 (lower is better)
Translates to: KETKVRKDGTGHWRGNWPPVTAR*PHCPWL
Trigger: AAGCCAGGGGCAGTGAGGTCATCTAGCAGTGACAGG...CGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTTTGTTTCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR TCA 90 bp GGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAAGGTTTGGTCCAATAGATCACCTGTCACTGCTAGATaGCCTCACTGCCCCTGGCTT +
Preference number: 4 (lower is better)
Translates to: GHWRGNWPSVQKVWSNRSPVTAR*PHCPWL
Trigger: AAGCCAGGGGCAGTGAGGTCATCTAGCAGTGACAGG...TGATCTATTGGACCAAACCTTCTGCACACTCGGCCAGTTCCCTCTCCAATGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR TCA 90 bp AGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAAGGTTACTTTCCAAGGAGCCTaGTGGGATCCTGTCACTGCT +
Preference number: 4 (lower is better)
Translates to: RKDGTGHWRGNWPSVQKVTFQGA*WDPVTA
Trigger: AGCAGTGACAGGATCCCATCAGGCTCCTTGGAAAGT...AACCTTCTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR GCA 90 bp AGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGACATGAGGGAAATTACTaGAGAAACACTGGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: RSGKMAPDIGEGTGRVCRHEGNY*RNTGAP
Trigger: GGGAGCCCCAGTGTTTCTGCAGTAATTTCCCTCATG...TCTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR GCA 90 bp CAGAAAGAAACAAAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCTGGCCCCAGGGATCTaGACACACGGCTTCATGAGG +
Preference number: 4 (lower is better)
Translates to: QKETKVRKDGTGHWRGNWLAPGI*THGFMR
Trigger: CCTCATGAAGCCGTGTGTGCAGATCCCTGGGGCCAG...CCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTTTGTTTCTTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR GCA 90 bp CATTGGAGAGGGAACTGGCCGAGTGTGCAGAAGGTTTGGTCCAATAGATCACTGCTGCTCTTCCCAGCCTaGTTCCCCTCAAGGCCCTTT +
Preference number: 4 (lower is better)
Translates to: HWRGNWPSVQKVWSNRSLLLFPA*FPSRPF
Trigger: AAAGGGCCTTGAGGGGAAGCAGGCTGGGAAGAGCAG...CAGTGATCTATTGGACCAAACCTTCTGCACACTCGGCCAGTTCCCTCTCCAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR GCA 90 bp TGGTTCCTGAACAGAAAGAAACAAAGGTCAGGAAAGATGGCACCGGACATTGGAGCCACCAGCTGCAGCTaGGGCACGACTGCAGTGTGG +
Preference number: 4 (lower is better)
Translates to: WFLNRKKQRSGKMAPDIGATSCS*GTTAVW
Trigger: CCACACTGCAGTCGTGCCGCAGCTGCAGCTGGTGGC...TCCAATGTCCGGTGCCATCTTTCCTGACCTTTGTTTCTTTCTGTTCAGGAACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR GCA 90 bp AAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGGGAACTGGCCGAGTGTaGAGAAGGTTTGGTCCAATA +
Preference number: 4 (lower is better)
Translates to: KVRKDGTGHWRGNWPSVQGTGRV*RRFGPI
Trigger: TATTGGACCAAACCTTCTGCACACTCGGCCAGTTCC...CTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR GCA 90 bp TTGCACGGTATTGAGGGACACGTTGATTGTTTTGGTCAGAAAGGGTCACGGACACTGTCCCCAAACCTCTaGTTCCGCGAGCGTCGTCCC +
Preference number: 4 (lower is better)
Translates to: LHGIEGHVDCFGQKGSRTLSPNL*FRERRP
Trigger: GGGACGACGCTCGCGGAAGCAGAGGTTTGGGGACAG...TGTCCGTGACCCTTTCTGACCAAAACAATCAACGTGTCCCTCAATACCGTGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453030.5
CDS-3UTR CCA 90 bp CACCTTCATCCGAGAGGCCCAGTAGTTCCCTGCGGGTCCTGCTTGCTATTTCTTGTGGTCTGTAAACACTaGTGGAGTTGGCAAGGGAGG +
Preference number: 4 (lower is better)
Translates to: HLHPRGPVVPCGSCLLFLVVCKH*WSWQGR
Trigger: CCTCCCTTGCCAACTCCACCAGTGTTTACAGACCAC...AAGAAATAGCAAGCAGGACCCGCAGGGAACTACTGGGCCTCTCGGATGAAGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373386.6
CDS-3UTR CCA 90 bp AGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAAGGTTTGGTCTCTTCCGCGCTGACTTaGGTGACTCTGGTAAGACAT +
Preference number: 4 (lower is better)
Translates to: RWHRTLERELAECAEGLVSSALT*VTLVRH
Trigger: ATGTCTTACCAGAGTCACCCAAGTCAGCGCGGAAGA...GACCAAACCTTCTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp CAGAAAGAAACAAAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGTCTGCCACAGGGTCCTaGTCAGAGCTGGCTGAGTGC +
Preference number: 4 (lower is better)
Translates to: QKETKVRKDGTGHWRGNWSATGS*SELAEC
Trigger: GCACTCAGCCAGCTCTGACCAGGACCCTGTGGCAGA...CCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTTTGTTTCTTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp GGACTGATGGTTCCTGAACAGAAAGAAACAAAGGTCAGGAAAGATGGCACCGGAGAGAAAGCCGTGAGCTaGAAGGGGCTGCTGCCGGAG +
Preference number: 4 (lower is better)
Translates to: GLMVPEQKETKVRKDGTGEKAVS*KGLLPE
Trigger: CTCCGGCAGCAGCCCCTTCCAGCTCACGGCTTTCTC...TCCGGTGCCATCTTTCCTGACCTTTGTTTCTTTCTGTTCAGGAACCATCAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp TGGAGAGGGAACTGGCCGAGTGTGCAGAAGGTTTGGTCCAATAGATCACTGACAGATGGCACCGGACATTaGAGAGGGAACTGGCCGAGT +
Preference number: 4 (lower is better)
Translates to: WRGNWPSVQKVWSNRSLTDGTGH*RGNWPS
Trigger: ACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATC...TGTCAGTGATCTATTGGACCAAACCTTCTGCACACTCGGCCAGTTCCCTCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp TCACGGACAAGAAGAAAGGGCTCTTCTCGGCATCGTTTCCAATGTAGTTCTGATGCGAGCGTCGTCCCTTaGAGTTCGGCCTCTCCTCGC +
Preference number: 4 (lower is better)
Translates to: SRTRRKGSSRHRFQCSSDASVVP*SSASPR
Trigger: GCGAGGAGAGGCCGAACTCCAAGGGACGACGCTCGC...ATCAGAACTACATTGGAAACGATGCCGAGAAGAGCCCTTTCTTCTTGTCCGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453030.5
3UTR CAA 72 bp CCTTGGCTTTCTTCTAACCGCTTCCGGGGTTTTGATTaGGCCTTTGGCGCTCCTTCTGACTTGGGTCCACCT +
Preference number: 4 (lower is better)
Translates to: PWLSSNRFRGFD*AFGAPSDLGPP
Trigger: AGGTGGACCCAAGTCAGAAGGAGCGCCAAAGGCCAAATCAAAACCCCGGAAGCGGTTAGAAGAAAGCCAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373386.6
CDS-3UTR TCA 90 bp AGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAAGGTTTGGTCTCCAGCCCTTTAGAGTaGTTGTGTCACCCAGAAGAT +
Preference number: 4 (lower is better)
Translates to: RWHRTLERELAECAEGLVSSPLE*LCHPED
Trigger: ATCTTCTGGGTGACACAATCACTCTAAAGGGCTGGA...GACCAAACCTTCTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR TCA 90 bp GGACTGATGGTTCCTGAACAGAAAGAAACAAAGGTCAGGAAAGATGGCACCGGACCATGGAGTCGGTGGTaGAGGCCAGGAGATACGGGA +
Preference number: 4 (lower is better)
Translates to: GLMVPEQKETKVRKDGTGPWSRW*RPGDTG
Trigger: TCCCGTATCTCCTGGCCTTCACCACCGACTCCATGG...TCCGGTGCCATCTTTCCTGACCTTTGTTTCTTTCTGTTCAGGAACCATCAGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR TCA 90 bp CAAAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCTGCTTGCTATTTCTTTaGTCTCCATGCGAGACAGGG +
Preference number: 4 (lower is better)
Translates to: QRSGKMAPDIGEGTGRVCCLLFL*SPCETG
Trigger: CCCTGTCTCGCATGGAGATCAAAGAAATAGCAAGCA...GCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR TCA 90 bp TCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAAGGCCTCCCTCTCTTAGCTaGAAATGGGCAACACATCAA +
Preference number: 4 (lower is better)
Translates to: SGKMAPDIGEGTGRVCRRPPSLS*KWATHQ
Trigger: TTGATGTGTTGCCCATTTTCAGCTAAGAGAGGGAGG...CCTTCTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435213.6
CDS-3UTR TCA 90 bp CTGGGTTCTCTAAGTGCACGTCTGTTCTTCGCCAAGTACCAGGCAGGGCAGTTGATGGTTTGTGCTATCTaGCTCCCACAAGGCACCTTC +
Preference number: 4 (lower is better)
Translates to: LGSLSARLFFAKYQAGQLMVCAI*LPQGTF
Trigger: GAAGGTGCCTTGTGGGAGTCAGATAGCACAAACCAT...CAACTGCCCTGCCTGGTACTTGGCGAAGAACAGACGTGCACTTAGAGAACCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441134.5
ENST00000453030.5
CDS-3UTR GCA 90 bp TTTGGCGCTCCTTCTGACTTGGGTCCACCTTCATCCGAGAGGCCCAGTAGTTCCTCTGGGTTCTCTAAGTaGACGTCTGTTCTTCGCCAA +
Preference number: 4 (lower is better)
Translates to: FGAPSDLGPPSSERPSSSSGFSK*TSVLRQ
Trigger: TTGGCGAAGAACAGACGTGCACTTAGAGAACCCAGA...GGAACTACTGGGCCTCTCGGATGAAGGTGGACCCAAGTCAGAAGGAGCGCCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373386.6
CDS-3UTR GCA 90 bp CAAAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCTCTGGGTTCTCTAAGTaGACGTCTGTTCTTCGCCAA +
Preference number: 4 (lower is better)
Translates to: QRSGKMAPDIGEGTGRVCSGFSK*TSVLRQ
Trigger: TTGGCGAAGAACAGACGTGCACTTAGAGAACCCAGA...GCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR GCA 90 bp AGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGATCTGGGTTCTCTAAGTaGACGTCTGTTCTTCGCCAA +
Preference number: 4 (lower is better)
Translates to: RSGKMAPDIGEGTGRVCRSGFSK*TSVLRQ
Trigger: TTGGCGAAGAACAGACGTGCACTTAGAGAACCCAGA...TCTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR GCA 90 bp TACTTCAAGTCTATAATGTCTTCATCGGAGAAAGCCGTGAGCTGGAAGGGGCTGCTGGCCCCAGGGATCTaGACACACGGCTTCATGAGG +
Preference number: 4 (lower is better)
Translates to: YFKSIMSSSEKAVSWKGLLAPGI*THGFMR
Trigger: CCTCATGAAGCCGTGTGTGCAGATCCCTGGGGCCAG...CAGCCCCTTCCAGCTCACGGCTTTCTCCGATGAAGACATTATAGACTTGAAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373386.6
CDS-3UTR GCA 90 bp GGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAAAGGGTCTCAAGCACATaGATTTGCTTCACTGGCAGA +
Preference number: 4 (lower is better)
Translates to: GQERWHRTLERELAECAERVSST*ICFTGR
Trigger: TCTGCCAGTGAAGCAAATGCATGTGCTTGAGACCCT...TTCTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR GCA 90 bp AAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAGGGTCTCAAGCACATaGATTTGCTTCACTGGCAGA +
Preference number: 4 (lower is better)
Translates to: KVRKDGTGHWRGNWPSVQRVSST*ICFTGR
Trigger: TCTGCCAGTGAAGCAAATGCATGTGCTTGAGACCCT...CTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR GCA 90 bp GGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAAGGTTTGGTCCAATAGATCAGACAGGGACAAGGAGTaGGTGACTGGAATGGCAGCA +
Preference number: 4 (lower is better)
Translates to: GHWRGNWPSVQKVWSNRSDRDKE*VTGMAA
Trigger: TGCTGCCATTCCAGTCACGCACTCCTTGTCCCTGTC...TGATCTATTGGACCAAACCTTCTGCACACTCGGCCAGTTCCCTCTCCAATGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR GCA 90 bp CAAAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCCCTGCGGGTCCTGCTTaGTATTTCTTTGATCTCCAT +
Preference number: 4 (lower is better)
Translates to: QRSGKMAPDIGEGTGRVCPAGPA*YFFDLH
Trigger: ATGGAGATCAAAGAAATAGCAAGCAGGACCCGCAGG...GCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR GCA 90 bp AGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGACCTGCGGGTCCTGCTTaGTATTTCTTTGATCTCCAT +
Preference number: 4 (lower is better)
Translates to: RSGKMAPDIGEGTGRVCRPAGPA*YFFDLH
Trigger: ATGGAGATCAAAGAAATAGCAAGCAGGACCCGCAGG...TCTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp AGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAAATCTTCCAGCCCTTTaGATGGCTCCATCAGCATCA +
Preference number: 4 (lower is better)
Translates to: RSGKMAPDIGEGTGRVCRNLPAL*MAPSAS
Trigger: TGATGCTGATGGAGCCATCCAAAGGGCTGGAAGATT...TCTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp GGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAACTGTGGTATCATTTTTaGTATCCAGACCGCCACGGT +
Preference number: 4 (lower is better)
Translates to: GQERWHRTLERELAECAELWYHF*YPDRHG
Trigger: ACCGTGGCGGTCTGGATACCAAAAATGATACCACAG...TTCTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp CATTGGAGAGGGAACTGGCCGAGTGTGCAGAAGGTTTGGTCCAATAGATCACTGGTCTGTAAACACTGGTaGAGTTGGCAAGGGAGGGCC +
Preference number: 4 (lower is better)
Translates to: HWRGNWPSVQKVWSNRSLVCKHW*SWQGRA
Trigger: GGCCCTCCCTTGCCAACTCCACCAGTGTTTACAGAC...CAGTGATCTATTGGACCAAACCTTCTGCACACTCGGCCAGTTCCCTCTCCAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp GGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAAGGTTTGGTCCAATAGATCACTAACAAACTCCGCCTaGCGGGCCTCCTCTTTCTTC +
Preference number: 4 (lower is better)
Translates to: GHWRGNWPSVQKVWSNRSLTNSA*RASSFF
Trigger: GAAGAAAGAGGAGGCCCGCCAGGCGGAGTTTGTTAG...TGATCTATTGGACCAAACCTTCTGCACACTCGGCCAGTTCCCTCTCCAATGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp CATTGGAGAGGGAACTGGCCGAGTGTGCAGAAGGTTTGGTCCAATAGATCACTGCTAACAAACTCCGCCTaGCGGGCCTCCTCTTTCTTC +
Preference number: 4 (lower is better)
Translates to: HWRGNWPSVQKVWSNRSLLTNSA*RASSFF
Trigger: GAAGAAAGAGGAGGCCCGCCAGGCGGAGTTTGTTAG...CAGTGATCTATTGGACCAAACCTTCTGCACACTCGGCCAGTTCCCTCTCCAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp CAAAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCCTAAGGTCATCACCATaGGAGAGTCAGACAGACAGA +
Preference number: 4 (lower is better)
Translates to: QRSGKMAPDIGEGTGRVCLRSSP*ESQTDR
Trigger: TCTGTCTGTCTGACTCTCCCATGGTGATGACCTTAG...GCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp GGACTGATGGTTCCTGAACAGAAAGAAACAAAGGTCAGGAAAGATGGCACCGGAGGCACGACTGCAGTGTaGACCAGGTTCCCGTTCACC +
Preference number: 4 (lower is better)
Translates to: GLMVPEQKETKVRKDGTGGTTAV*TRFPFT
Trigger: GGTGAACGGGAACCTGGTCCACACTGCAGTCGTGCC...TCCGGTGCCATCTTTCCTGACCTTTGTTTCTTTCTGTTCAGGAACCATCAGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp TGGAGAGGGAACTGGCCGAGTGTGCAGAAGGTTTGGTCCAATAGATCACTGACAGCGCTCCTTCTGACTTaGGTCCACCTTCATCCGAGA +
Preference number: 4 (lower is better)
Translates to: WRGNWPSVQKVWSNRSLTALLLT*VHLHPR
Trigger: TCTCGGATGAAGGTGGACCCAAGTCAGAAGGAGCGC...TGTCAGTGATCTATTGGACCAAACCTTCTGCACACTCGGCCAGTTCCCTCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp CATTGGAGAGGGAACTGGCCGAGTGTGCAGAAGGTTTGGTCCAATAGATCACTGGGCTTGGGGCCTCCTTaGCTTTCTTCTAACCGCTTC +
Preference number: 4 (lower is better)
Translates to: HWRGNWPSVQKVWSNRSLGLGPP*LSSNRF
Trigger: GAAGCGGTTAGAAGAAAGCCAAGGAGGCCCCAAGCC...CAGTGATCTATTGGACCAAACCTTCTGCACACTCGGCCAGTTCCCTCTCCAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp ACAAGGGGACTGATGGTTCCTGAACAGAAAGAAACAAAGGTCAGGAAAGATGGCGGTCCTGGTCAGAGCTaGCTGAGTGCCCCTCAGGGT +
Preference number: 4 (lower is better)
Translates to: TRGLMVPEQKETKVRKDGGPGQS*LSAPQG
Trigger: ACCCTGAGGGGCACTCAGCCAGCTCTGACCAGGACC...GCCATCTTTCCTGACCTTTGTTTCTTTCTGTTCAGGAACCATCAGTCCCCTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp AACAAAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTCATTGGAGAGGGAACTaGCCGAGTGTGCAGAAGGTT +
Preference number: 4 (lower is better)
Translates to: NKGQERWHRTLERELAECHWRGN*PSVQKV
Trigger: AACCTTCTGCACACTCGGCCAGTTCCCTCTCCAATG...ACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTTTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp CAGAAAGAAACAAAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGGATGGCACCGGACATTaGAGAGGGAACTGGCCGAGT +
Preference number: 4 (lower is better)
Translates to: QKETKVRKDGTGHWRGNWDGTGH*RGNWPS
Trigger: ACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATC...CCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTTTGTTTCTTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
3UTR CAA 72 bp TTTCTTCTAACCGCTTCCGGGGTTTTGATTTGGCCTTaGGCGCTCCTTCTGACTTGGGTCCACCTTCATCCG +
Preference number: 4 (lower is better)
Translates to: FLLTASGVLIWP*ALLLTWVHLHP
Trigger: CGGATGAAGGTGGACCCAAGTCAGAAGGAGCGCCAAAGGCCAAATCAAAACCCCGGAAGCGGTTAGAAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373386.6
CDS-3UTR TCA 90 bp TCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAAGGCATAATGTTTCCTACTaGAATCCCCACGTCTACAGC +
Preference number: 4 (lower is better)
Translates to: SGKMAPDIGEGTGRVCRRHNVSY*NPHVYS
Trigger: GCTGTAGACGTGGGGATTTCAGTAGGAAACATTATG...CCTTCTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR TCA 90 bp CACCTTCATCCGAGAGGCCCAGTAGTTCCCTGCGGGTCCTGCTTGCTATTTCTTAGCCATTTTCCACTCTaGATCTTCCAGCCCTTTGGA +
Preference number: 4 (lower is better)
Translates to: HLHPRGPVVPCGSCLLFLSHFPL*IFQPFG
Trigger: TCCAAAGGGCTGGAAGATTCAGAGTGGAAAATGGCT...AAGAAATAGCAAGCAGGACCCGCAGGGAACTACTGGGCCTCTCGGATGAAGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373386.6
CDS-3UTR TCA 90 bp AGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAAGGTTTCCAGCCCTTTAGAGTaGTTGTGTCACCCAGAAGAT +
Preference number: 4 (lower is better)
Translates to: RKDGTGHWRGNWPSVQKVSSPLE*LCHPED
Trigger: ATCTTCTGGGTGACACAATCACTCTAAAGGGCTGGA...AACCTTCTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR TCA 90 bp AAAGAAACAAAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGTTCCTTTGTCTGCTCTaGGAACCAGAAGGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: KETKVRKDGTGHWRGNWPFLCLL*EPEGPG
Trigger: CCCTGGACCTTCTGGTTCTCAGAGCAGACAAAGGAA...CGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTTTGTTTCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR TCA 90 bp AGGCCCTTTTGCAGAGCACTTAGCCTGAAGACAAAGAGGCGAGCATCTTTTCCTACAATGAGGTGCTGGTaGCCCCGCTTGGCTTGTTGT +
Preference number: 4 (lower is better)
Translates to: RPFCRALSLKTKRRASFPTMRCW*PRLACC
Trigger: ACAACAAGCCAAGCGGGGTCACCAGCACCTCATTGT...AGGAAAAGATGCTCGCCTCTTTGTCTTCAGGCTAAGTGCTCTGCAAAAGGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000460176.6
CDS-3UTR TCA 90 bp GGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAAACAGAACTGGAAATCTaGCGCAGAAGGTTGAACCAA +
Preference number: 4 (lower is better)
Translates to: GQERWHRTLERELAECAETELEI*RRRLNQ
Trigger: TTGGTTCAACCTTCTGCGTCAGATTTCCAGTTCTGT...TTCTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR TCA 90 bp ACAAGGGGACTGATGGTTCCTGAACAGAAAGAAACAAAGGTCAGGAAAGATGGCGGGACAAGGAGTGCGTaGCTGGAATGGCAGCAAGGC +
Preference number: 4 (lower is better)
Translates to: TRGLMVPEQKETKVRKDGGTRSA*LEWQQG
Trigger: GCCTTGCTGCCATTCCAGTCACGCACTCCTTGTCCC...GCCATCTTTCCTGACCTTTGTTTCTTTCTGTTCAGGAACCATCAGTCCCCTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR TCA 90 bp CAGAAAGAAACAAAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCTTTGGCGCTCCTTCTaGCTTGGGTCCACCTTCATC +
Preference number: 4 (lower is better)
Translates to: QKETKVRKDGTGHWRGNWLWRSF*LGSTFI
Trigger: GATGAAGGTGGACCCAAGTCAGAAGGAGCGCCAAAG...CCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTTTGTTTCTTTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR TCA 90 bp AAGAAACAAAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAACTTTCCAAGGAGCCTaGTGGGATCCTGTCACTGCT +
Preference number: 4 (lower is better)
Translates to: KKQRSGKMAPDIGEGTGRTFQGA*WDPVTA
Trigger: AGCAGTGACAGGATCCCATCAGGCTCCTTGGAAAGT...TCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTTTGTTTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR GCA 90 bp ACCACCTTTATTACAAGGGGACTGATGGTTCCTGAACAGAAAGAAACAAAGGTCGCCCCGGCTCCTCACTaGAGGGGAGCCTCCTTGCAA +
Preference number: 4 (lower is better)
Translates to: TTFITRGLMVPEQKETKVAPAPH*RGASLQ
Trigger: TTGCAAGGAGGCTCCCCTGCAGTGAGGAGCCGGGGC...GACCTTTGTTTCTTTCTGTTCAGGAACCATCAGTCCCCTTGTAATAAAGGTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373387.9
CDS-3UTR GCA 90 bp CAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAAGGTTCAAGCACATGCATTTaGTTCACTGGCAGAGTTCTG +
Preference number: 4 (lower is better)
Translates to: QERWHRTLERELAECAEGSSTCI*FTGRVL
Trigger: CAGAACTCTGCCAGTGAAGCAAATGCATGTGCTTGA...ACCTTCTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR GCA 90 bp TCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAAGGTCAAGCACATGCATTTaGTTCACTGGCAGAGTTCTG +
Preference number: 4 (lower is better)
Translates to: SGKMAPDIGEGTGRVCRRSSTCI*FTGRVL
Trigger: CAGAACTCTGCCAGTGAAGCAAATGCATGTGCTTGA...CCTTCTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR GCA 90 bp ATCTTTTCCTTTGTCTGCTCTGAGAACCAGAAGGTCCAGGGTCTCAAGCACATGCTGCTCTTCCCAGCCTaGTTCCCCTCAAGGCCCTTT +
Preference number: 4 (lower is better)
Translates to: IFSFVCSENQKVQGLKHMLLFPA*FPSRPF
Trigger: AAAGGGCCTTGAGGGGAAGCAGGCTGGGAAGAGCAG...CATGTGCTTGAGACCCTGGACCTTCTGGTTCTCAGAGCAGACAAAGGAAAAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460176.6
CDS-3UTR GCA 90 bp TGCAGAGCACTTAGCCTGAAGACAAAGAGGCGAGCATCTTTTCCTTTGTCTGCTCTCTGCAGTCAGACCTaGTCTTCCCAGCCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: CRALSLKTKRRASFPLSALCSQT*SSQPAS
Trigger: GGAAGCAGGCTGGGAAGAGCAGGTCTGACTGCAGAG...AGCAGACAAAGGAAAAGATGCTCGCCTCTTTGTCTTCAGGCTAAGTGCTCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460176.6
CDS-3UTR GCA 90 bp ACCTCAATGAAATCTACCACCTTTATTACAAGGGGACTGATGGTTCCTGAACAGGCCACCAGCTGCAGCTaGGGCACGACTGCAGTGTGG +
Preference number: 4 (lower is better)
Translates to: TSMKSTTFITRGLMVPEQATSCS*GTTAVW
Trigger: CCACACTGCAGTCGTGCCGCAGCTGCAGCTGGTGGC...CTGTTCAGGAACCATCAGTCCCCTTGTAATAAAGGTGGTAGATTTCATTGAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR GCA 90 bp ACCTTTATTACAAGGGGACTGATGGTTCCTGAACAGAAAGAAACAAAGGTCAGGGCCACCAGCTGCAGCTaGGGCACGACTGCAGTGTGG +
Preference number: 4 (lower is better)
Translates to: TFITRGLMVPEQKETKVRATSCS*GTTAVW
Trigger: CCACACTGCAGTCGTGCCGCAGCTGCAGCTGGTGGC...CCTGACCTTTGTTTCTTTCTGTTCAGGAACCATCAGTCCCCTTGTAATAAAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR GCA 90 bp ATTTCTTTGATCTCCATGCGAGACAGGGACAAGGAGTGCGTGACTGGAATGGCAGGCCCAGTAGTTCCCTaGGGGTCCTGCTTGCTATTT +
Preference number: 4 (lower is better)
Translates to: ISLISMRDRDKECVTGMAGPVVP*GSCLLF
Trigger: AAATAGCAAGCAGGACCCGCAGGGAACTACTGGGCC...TGCCATTCCAGTCACGCACTCCTTGTCCCTGTCTCGCATGGAGATCAAAGAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373386.6
CDS-3UTR GCA 90 bp ACCTTTATTACAAGGGGACTGATGGTTCCTGAACAGAAAGAAACAAAGGTCAGGTGCCGGAGACCGGGCTaGCCTCTCTGTCTGCCACAG +
Preference number: 4 (lower is better)
Translates to: TFITRGLMVPEQKETKVRCRRPG*PLCLPQ
Trigger: CTGTGGCAGACAGAGAGGGCAGCCCGGTCTCCGGCA...CCTGACCTTTGTTTCTTTCTGTTCAGGAACCATCAGTCCCCTTGTAATAAAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp AACAAAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTCAAAAAGGGCTGCTATaGAACAGACTTGCAGTGCCC +
Preference number: 4 (lower is better)
Translates to: NKGQERWHRTLERELAECQKGLL*NRLAVP
Trigger: GGGCACTGCAAGTCTGTTCCATAGCAGCCCTTTTTG...ACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTTTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373387.9
CDS-3UTR CCA 90 bp CACCTTCATCCGAGAGGCCCAGTAGTTCCCTGCGGGTCCTGCTTGCTATTTCTTCTGTGGTATCATTTTTaGTATCCAGACCGCCACGGT +
Preference number: 4 (lower is better)
Translates to: HLHPRGPVVPCGSCLLFLLWYHF*YPDRHG
Trigger: ACCGTGGCGGTCTGGATACCAAAAATGATACCACAG...AAGAAATAGCAAGCAGGACCCGCAGGGAACTACTGGGCCTCTCGGATGAAGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373386.6
CDS-3UTR CCA 90 bp CAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAAGGTATATCGTTTCCAATGTaGCGTTTCCTTTCCACCTGC +
Preference number: 4 (lower is better)
Translates to: QERWHRTLERELAECAEGISFPM*RFLSTC
Trigger: GCAGGTGGAAAGGAAACGCCACATTGGAAACGATAT...ACCTTCTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp AAGAAACAAAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAAAACACTGGTGGAGTTaGCAAGGGAGGGCCAAAGAG +
Preference number: 4 (lower is better)
Translates to: KKQRSGKMAPDIGEGTGRKHWWS*QGRAKE
Trigger: CTCTTTGGCCCTCCCTTGCCAACTCCACCAGTGTTT...TCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTTTGTTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp CTTGCTATTTCTTTGATCTCCATGCGAGACAGGGACAAGGAGTGCGTGACTGGAGTCTGTAAACACTGGTaGAGTTGGCAAGGGAGGGCC +
Preference number: 4 (lower is better)
Translates to: LAISLISMRDRDKECVTGVCKHW*SWQGRA
Trigger: GGCCCTCCCTTGCCAACTCCACCAGTGTTTACAGAC...TCCAGTCACGCACTCCTTGTCCCTGTCTCGCATGGAGATCAAAGAAATAGCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373386.6
CDS-3UTR CCA 90 bp GGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAATGGTTCCAACAGAACTaGAAATCTGACGCAGAAGGT +
Preference number: 4 (lower is better)
Translates to: GQERWHRTLERELAECAEWFQQN*KSDAEG
Trigger: ACCTTCTGCGTCAGATTTCCAGTTCTGTTGGAACCA...TTCTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp AAGAAACAAAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAAGTATATATCCGACCTaGAGGCCACCAGCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: KKQRSGKMAPDIGEGTGRSIYPT*RPPAAA
Trigger: AGCTGCAGCTGGTGGCCTCCAGGTCGGATATATACT...TCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTTTGTTTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp GGACTGATGGTTCCTGAACAGAAAGAAACAAAGGTCAGGAAAGATGGCACCGGACAAGGAGTGCGTGACTaGAATGGCAGCAAGGCCCAC +
Preference number: 4 (lower is better)
Translates to: GLMVPEQKETKVRKDGTGQGVRD*NGSKAH
Trigger: GTGGGCCTTGCTGCCATTCCAGTCACGCACTCCTTG...TCCGGTGCCATCTTTCCTGACCTTTGTTTCTTTCTGTTCAGGAACCATCAGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp GGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAAGGTTTGGTCCAATAGATCATCCGGGGTTTTGATTTaGCCTTTGGCGCTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: GHWRGNWPSVQKVWSNRSSGVLI*PLALLL
Trigger: CAGAAGGAGCGCCAAAGGCCAAATCAAAACCCCGGA...TGATCTATTGGACCAAACCTTCTGCACACTCGGCCAGTTCCCTCTCCAATGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp ACAAGGGGACTGATGGTTCCTGAACAGAAAGAAACAAAGGTCAGGAAAGATGGCTCTGCCACAGGGTCCTaGTCAGAGCTGGCTGAGTGC +
Preference number: 4 (lower is better)
Translates to: TRGLMVPEQKETKVRKDGSATGS*SELAEC
Trigger: GCACTCAGCCAGCTCTGACCAGGACCCTGTGGCAGA...GCCATCTTTCCTGACCTTTGTTTCTTTCTGTTCAGGAACCATCAGTCCCCTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR TCA 90 bp AACAAAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTACATCTCATCATCAGTaGGCTGCCCATCTTTGGCAA +
Preference number: 4 (lower is better)
Translates to: NKGQERWHRTLERELAECTSHHQ*AAHLWQ
Trigger: TTGCCAAAGATGGGCAGCTCACTGATGATGAGATGT...ACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTTTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR TCA 90 bp AGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGATGGAAACATGAAACATaGTCTCATGCCCTTGGTACA +
Preference number: 4 (lower is better)
Translates to: RSGKMAPDIGEGTGRVCRWKHET*SHALGT
Trigger: TGTACCAAGGGCATGAGATCATGTTTCATGTTTCCA...TCTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR TCA 90 bp AGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAAGGTTTGGTCTGGAAACATGAAACATaGTCTCATGCCCTTGGTACA +
Preference number: 4 (lower is better)
Translates to: RWHRTLERELAECAEGLVWKHET*SHALGT
Trigger: TGTACCAAGGGCATGAGATCATGTTTCATGTTTCCA...GACCAAACCTTCTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR TCA 90 bp AGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAAACATGGTGGAAACATaGAACATGATCTCATGCCCT +
Preference number: 4 (lower is better)
Translates to: RSGKMAPDIGEGTGRVCRNMVET*NMISCP
Trigger: AGGGCATGAGATCATGTTTCATGTTTCCACCATGTT...TCTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR TCA 90 bp CAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAAGGTAACATGGTGGAAACATaGAACATGATCTCATGCCCT +
Preference number: 4 (lower is better)
Translates to: QERWHRTLERELAECAEGNMVET*NMISCP
Trigger: AGGGCATGAGATCATGTTTCATGTTTCCACCATGTT...ACCTTCTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR TCA 90 bp AAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGCTTGGAACACAATGGTaGCGATATCGTTTCCAATGT +
Preference number: 4 (lower is better)
Translates to: KVRKDGTGHWRGNWPSVQLGTQW*RYRFQC
Trigger: ACATTGGAAACGATATCGTCACCATTGTGTTCCAAG...CTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR TCA 90 bp GGACTGATGGTTCCTGAACAGAAAGAAACAAAGGTCAGGAAAGATGGCACCGGAACAATGAGGTGCTGGTaGCCCCGCTTGGCTTGTTGT +
Preference number: 4 (lower is better)
Translates to: GLMVPEQKETKVRKDGTGTMRCW*PRLACC
Trigger: ACAACAAGCCAAGCGGGGTCACCAGCACCTCATTGT...TCCGGTGCCATCTTTCCTGACCTTTGTTTCTTTCTGTTCAGGAACCATCAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR TCA 90 bp ACAAGGGGACTGATGGTTCCTGAACAGAAAGAAACAAAGGTCAGGAAAGATGGCCCTGTCACTGCTAGATaGCCTCACTGCCCCTGGCTT +
Preference number: 4 (lower is better)
Translates to: TRGLMVPEQKETKVRKDGPVTAR*PHCPWL
Trigger: AAGCCAGGGGCAGTGAGGTCATCTAGCAGTGACAGG...GCCATCTTTCCTGACCTTTGTTTCTTTCTGTTCAGGAACCATCAGTCCCCTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR TCA 90 bp ACCTTTATTACAAGGGGACTGATGGTTCCTGAACAGAAAGAAACAAAGGTCAGGCATCGGAGAAAGCCGTaGGCTGGAAGGGGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: TFITRGLMVPEQKETKVRHRRKP*AGRGCC
Trigger: GCAGCAGCCCCTTCCAGCTCACGGCTTTCTCCGATG...CCTGACCTTTGTTTCTTTCTGTTCAGGAACCATCAGTCCCCTTGTAATAAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR TCA 90 bp CCACCTTCATCCGAGAGGCCCAGTAGTTCCCTGCGGGTCCTGCTTGCTATTTCTTTATTACAAGGGGACTaGTGGTTCCTGAACAGAAAG +
Preference number: 4 (lower is better)
Translates to: PPSSERPSSSLRVLLAISLLQGD*WFLNRK
Trigger: CTTTCTGTTCAGGAACCATCAGTCCCCTTGTAATAA...AGAAATAGCAAGCAGGACCCGCAGGGAACTACTGGGCCTCTCGGATGAAGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373386.6
CDS-3UTR TCA 90 bp ACGTTGATTGTTTTGGTCAGAAAGGGTCACGGACAAGAAGAAAGGGCTCTTCTCTTCGTTGGCCATGTCTaGAGGGGCTGGATGCCGAAG +
Preference number: 4 (lower is better)
Translates to: TLIVLVRKGHGQEERALLFVGHV*RGWMPK
Trigger: CTTCGGCATCCAGCCCCTTCAGACATGGCCAACGAA...GAGAAGAGCCCTTTCTTCTTGTCCGTGACCCTTTCTGACCAAAACAATCAACGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000429629.6
ENST00000441134.5
ENST00000453030.5
CDS-3UTR GCA 90 bp AAGAAACAAAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGACATGAGGGAAATTACTaGAGAAACACTGGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: KKQRSGKMAPDIGEGTGRHEGNY*RNTGAP
Trigger: GGGAGCCCCAGTGTTTCTGCAGTAATTTCCCTCATG...TCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTTTGTTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR GCA 90 bp AAAGAAACAAAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGCATGAGGGAAATTACTaGAGAAACACTGGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: KETKVRKDGTGHWRGNWPHEGNY*RNTGAP
Trigger: GGGAGCCCCAGTGTTTCTGCAGTAATTTCCCTCATG...CGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTTTGTTTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR GCA 90 bp TTTGGCGCTCCTTCTGACTTGGGTCCACCTTCATCCGAGAGGCCCAGTAGTTCCATCTTTTCCTTTGTCTaGTCTGAGAACCAGAAGGTC +
Preference number: 4 (lower is better)
Translates to: FGAPSDLGPPSSERPSSSIFSFV*SENQKV
Trigger: GACCTTCTGGTTCTCAGAGCAGACAAAGGAAAAGAT...GGAACTACTGGGCCTCTCGGATGAAGGTGGACCCAAGTCAGAAGGAGCGCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373386.6
CDS-3UTR GCA 90 bp AGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAATCTTTTCCTTTGTCTaGTCTGAGAACCAGAAGGTC +
Preference number: 4 (lower is better)
Translates to: RSGKMAPDIGEGTGRVCRIFSFV*SENQKV
Trigger: GACCTTCTGGTTCTCAGAGCAGACAAAGGAAAAGAT...TCTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR GCA 90 bp CCACCTTCATCCGAGAGGCCCAGTAGTTCCCTGCGGGTCCTGCTTGCTATTTCTCAGTTTATTCCGAATTaGAACCACAATCCTCAGCTC +
Preference number: 4 (lower is better)
Translates to: PPSSERPSSSLRVLLAISQFIPN*NHNPQL
Trigger: GAGCTGAGGATTGTGGTTGCAATTCGGAATAAACTG...AGAAATAGCAAGCAGGACCCGCAGGGAACTACTGGGCCTCTCGGATGAAGGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373386.6
CDS-3UTR GCA 90 bp GGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAACAGTTTATTCCGAATTaGAACCACAATCCTCAGCTC +
Preference number: 4 (lower is better)
Translates to: GQERWHRTLERELAECAEQFIPN*NHNPQL
Trigger: GAGCTGAGGATTGTGGTTGCAATTCGGAATAAACTG...TTCTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR GCA 90 bp GGACTGATGGTTCCTGAACAGAAAGAAACAAAGGTCAGGAAAGATGGCACCGGAGGCCCAGTAGTTCCCTaGGGGTCCTGCTTGCTATTT +
Preference number: 4 (lower is better)
Translates to: GLMVPEQKETKVRKDGTGGPVVP*GSCLLF
Trigger: AAATAGCAAGCAGGACCCGCAGGGAACTACTGGGCC...TCCGGTGCCATCTTTCCTGACCTTTGTTTCTTTCTGTTCAGGAACCATCAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp AGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAGATTCCTCTCCTTCTTaGAACACAATGGTGACGATA +
Preference number: 4 (lower is better)
Translates to: RSGKMAPDIGEGTGRVCRDSSPS*NTMVTI
Trigger: TATCGTCACCATTGTGTTCCAAGAAGGAGAGGAATC...TCTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp AGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAAAAATATGTGTAAAGTaGGAGCGGATCATGGAAGGC +
Preference number: 4 (lower is better)
Translates to: RSGKMAPDIGEGTGRVCRKICVK*ERIMEG
Trigger: GCCTTCCATGATCCGCTCCCACTTTACACATATTTT...TCTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp AGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAAGGTTAAGTCCCTGAATTCCTaGTGGTCTGTAAACACTGGT +
Preference number: 4 (lower is better)
Translates to: RKDGTGHWRGNWPSVQKVKSLNS*WSVNTG
Trigger: ACCAGTGTTTACAGACCACCAGGAATTCAGGGACTT...AACCTTCTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp CAAAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCTTTCTGGGCAAATGTTaGGGTTTCCAAAGTGGCTTT +
Preference number: 4 (lower is better)
Translates to: QRSGKMAPDIGEGTGRVCFLGKC*GFQSGF
Trigger: AAAGCCACTTTGGAAACCCCAACATTTGCCCAGAAA...GCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp GGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAATTTCTGGGCAAATGTTaGGGTTTCCAAAGTGGCTTT +
Preference number: 4 (lower is better)
Translates to: GQERWHRTLERELAECAEFLGKC*GFQSGF
Trigger: AAAGCCACTTTGGAAACCCCAACATTTGCCCAGAAA...TTCTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp CATTGGAGAGGGAACTGGCCGAGTGTGCAGAAGGTTTGGTCCAATAGATCACTGTCTTCCGCGCTGACTTaGGTGACTCTGGTAAGACAT +
Preference number: 4 (lower is better)
Translates to: HWRGNWPSVQKVWSNRSLSSALT*VTLVRH
Trigger: ATGTCTTACCAGAGTCACCCAAGTCAGCGCGGAAGA...CAGTGATCTATTGGACCAAACCTTCTGCACACTCGGCCAGTTCCCTCTCCAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp AAAGAAACAAAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGTTACTGCAGAAACACTaGGGCTCCCACGGCTCTTTT +
Preference number: 4 (lower is better)
Translates to: KETKVRKDGTGHWRGNWPLLQKH*GSHGSF
Trigger: AAAAGAGCCGTGGGAGCCCCAGTGTTTCTGCAGTAA...CGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTTTGTTTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp GGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAAATGCATTTGCTTCACTaGCAGAGTTCTGTCAAACAC +
Preference number: 4 (lower is better)
Translates to: GQERWHRTLERELAECAEMHLLH*QSSVKH
Trigger: GTGTTTGACAGAACTCTGCCAGTGAAGCAAATGCAT...TTCTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp CAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAAGGTATCTCCCTGATGTACTaGAATTCTTCAACAGGTGAC +
Preference number: 4 (lower is better)
Translates to: QERWHRTLERELAECAEGISLMY*NSSTGD
Trigger: GTCACCTGTTGAAGAATTCCAGTACATCAGGGAGAT...ACCTTCTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp CAAAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCATCTCCCTGATGTACTaGAATTCTTCAACAGGTGAC +
Preference number: 4 (lower is better)
Translates to: QRSGKMAPDIGEGTGRVCISLMY*NSSTGD
Trigger: GTCACCTGTTGAAGAATTCCAGTACATCAGGGAGAT...GCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp CTGTTACTTCAAGTCTATAATGTCTTCATCGGAGAAAGCCGTGAGCTGGAAGGGCTGTTGGCCTCCACGTaGTGCAGCCTGAAGGCTTCT +
Preference number: 4 (lower is better)
Translates to: LLLQVYNVFIGESRELEGLLAST*CSLKAS
Trigger: AGAAGCCTTCAGGCTGCACCACGTGGAGGCCAACAG...CCCTTCCAGCTCACGGCTTTCTCCGATGAAGACATTATAGACTTGAAGTAACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373386.6
CDS-3UTR CCA 90 bp AGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAAGGTTTGGTCAGTGTGCAGAAGGTTTaGTCCAATAGATCACTGACA +
Preference number: 4 (lower is better)
Translates to: RWHRTLERELAECAEGLVSVQKV*SNRSLT
Trigger: TGTCAGTGATCTATTGGACCAAACCTTCTGCACACT...GACCAAACCTTCTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp GGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAAAAATTACAGCCCTCTTaGCACATGCAGAAAGAGACT +
Preference number: 4 (lower is better)
Translates to: GQERWHRTLERELAECAEKLQPS*HMQKET
Trigger: AGTCTCTTTCTGCATGTGCCAAGAGGGCTGTAATTT...TTCTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435213.6
CDS-3UTR CCA 90 bp TCAGAAAGGGTCACGGACAAGAAGAAAGGGCTCTTCTCGGCATCGTTTCCAATGTTCAGGGTCTTTCGTTaGCCATGTCTGAAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: SERVTDKKKGLFSASFPMFRVFR*PCLKGL
Trigger: CAGCCCCTTCAGACATGGCCAACGAAAGACCCTGAA...CATTGGAAACGATGCCGAGAAGAGCCCTTTCTTCTTGTCCGTGACCCTTTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429629.6
ENST00000441134.5
ENST00000453030.5
CDS-3UTR TCA 90 bp GGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAAGGTTTGGTCCAATAGATCAACATCTCATCATCAGTaGGCTGCCCATCTTTGGCAA +
Preference number: 4 (lower is better)
Translates to: GHWRGNWPSVQKVWSNRSTSHHQ*AAHLWQ
Trigger: TTGCCAAAGATGGGCAGCTCACTGATGATGAGATGT...TGATCTATTGGACCAAACCTTCTGCACACTCGGCCAGTTCCCTCTCCAATGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR TCA 90 bp TGGAGAGGGAACTGGCCGAGTGTGCAGAAGGTTTGGTCCAATAGATCACTGACAACATCTCATCATCAGTaGGCTGCCCATCTTTGGCAA +
Preference number: 4 (lower is better)
Translates to: WRGNWPSVQKVWSNRSLTTSHHQ*AAHLWQ
Trigger: TTGCCAAAGATGGGCAGCTCACTGATGATGAGATGT...TGTCAGTGATCTATTGGACCAAACCTTCTGCACACTCGGCCAGTTCCCTCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR TCA 90 bp AAGAAACAAAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGATCCAGCCCTTTAGAGTaGTTGTGTCACCCAGAAGAT +
Preference number: 4 (lower is better)
Translates to: KKQRSGKMAPDIGEGTGRSSPLE*LCHPED
Trigger: ATCTTCTGGGTGACACAATCACTCTAAAGGGCTGGA...TCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTTTGTTTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR TCA 90 bp AGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAAGGTTTGGTCGTACACAGTATAAACTaGATGTATCCCTGTGGTATC +
Preference number: 4 (lower is better)
Translates to: RWHRTLERELAECAEGLVVHSIN*MYPCGI
Trigger: GATACCACAGGGATACATTCAGTTTATACTGTGTAC...GACCAAACCTTCTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR TCA 90 bp AAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGGTACACAGTATAAACTaGATGTATCCCTGTGGTATC +
Preference number: 4 (lower is better)
Translates to: KVRKDGTGHWRGNWPSVQVHSIN*MYPCGI
Trigger: GATACCACAGGGATACATTCAGTTTATACTGTGTAC...CTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR TCA 90 bp TGGAGAGGGAACTGGCCGAGTGTGCAGAAGGTTTGGTCCAATAGATCACTGACAGCACACACGGCTTCATaGGGGAAATTACTGCAGAAA +
Preference number: 4 (lower is better)
Translates to: WRGNWPSVQKVWSNRSLTAHTAS*GKLLQK
Trigger: TTTCTGCAGTAATTTCCCTCATGAAGCCGTGTGTGC...TGTCAGTGATCTATTGGACCAAACCTTCTGCACACTCGGCCAGTTCCCTCTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR TCA 90 bp CATTGGAGAGGGAACTGGCCGAGTGTGCAGAAGGTTTGGTCCAATAGATCACTGGCACACACGGCTTCATaGGGGAAATTACTGCAGAAA +
Preference number: 4 (lower is better)
Translates to: HWRGNWPSVQKVWSNRSLAHTAS*GKLLQK
Trigger: TTTCTGCAGTAATTTCCCTCATGAAGCCGTGTGTGC...CAGTGATCTATTGGACCAAACCTTCTGCACACTCGGCCAGTTCCCTCTCCAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR TCA 90 bp GGACTGATGGTTCCTGAACAGAAAGAAACAAAGGTCAGGAAAGATGGCACCGGATTCCTTTGTCTGCTCTaGGAACCAGAAGGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: GLMVPEQKETKVRKDGTGFLCLL*EPEGPG
Trigger: CCCTGGACCTTCTGGTTCTCAGAGCAGACAAAGGAA...TCCGGTGCCATCTTTCCTGACCTTTGTTTCTTTCTGTTCAGGAACCATCAGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR TCA 90 bp ATCTTTTCCTTTGTCTGCTCTGAGAACCAGAAGGTCCAGGGTCTCAAGCACATGTTCCTTTGTCTGCTCTaGGAACCAGAAGGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: IFSFVCSENQKVQGLKHMFLCLL*EPEGPG
Trigger: CCCTGGACCTTCTGGTTCTCAGAGCAGACAAAGGAA...CATGTGCTTGAGACCCTGGACCTTCTGGTTCTCAGAGCAGACAAAGGAAAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460176.6
CDS-3UTR TCA 90 bp AGAGCACTTAGCCTGAAGACAAAGAGGCGAGCATCTTTTCCTTTGTCTGCTCTGGCAGAGCACTTAGCCTaGAGACAAAGAGGCGAGCAT +
Preference number: 4 (lower is better)
Translates to: RALSLKTKRRASFPLSALAEHLA*RQRGEH
Trigger: ATGCTCGCCTCTTTGTCTTCAGGCTAAGTGCTCTGC...CAGAGCAGACAAAGGAAAAGATGCTCGCCTCTTTGTCTTCAGGCTAAGTGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460176.6
CDS-3UTR TCA 90 bp AAAGAAACAAAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGCTCTCTGCTGTGGTaGGTGTTAATAGCATACAGG +
Preference number: 4 (lower is better)
Translates to: KETKVRKDGTGHWRGNWPSSLLW*VLIAYR
Trigger: CCTGTATGCTATTAACACTCACCACAGCAGAGAGCT...CGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTTTGTTTCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR TCA 90 bp GGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAAGGTTTGGTCCAATAGATCAAGCTCTCTGCTGTGGTaGGTGTTAATAGCATACAGG +
Preference number: 4 (lower is better)
Translates to: GHWRGNWPSVQKVWSNRSSSLLW*VLIAYR
Trigger: CCTGTATGCTATTAACACTCACCACAGCAGAGAGCT...TGATCTATTGGACCAAACCTTCTGCACACTCGGCCAGTTCCCTCTCCAATGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR TCA 90 bp ACCACCTTTATTACAAGGGGACTGATGGTTCCTGAACAGAAAGAAACAAAGGTCCCACGTGGTGCAGCCTaGAGGCTTCTCCTGTGCTCT +
Preference number: 4 (lower is better)
Translates to: TTFITRGLMVPEQKETKVPRGAA*RLLLCS
Trigger: AGAGCACAGGAGAAGCCTTCAGGCTGCACCACGTGG...GACCTTTGTTTCTTTCTGTTCAGGAACCATCAGTCCCCTTGTAATAAAGGTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR TCA 90 bp AAGTCTATAATGTCTTCATCGGAGAAAGCCGTGAGCTGGAAGGGGCTGCTGCCGACAGAACTGGAAATCTaGCGCAGAAGGTTGAACCAA +
Preference number: 4 (lower is better)
Translates to: KSIMSSSEKAVSWKGLLPTELEI*RRRLNQ
Trigger: TTGGTTCAACCTTCTGCGTCAGATTTCCAGTTCTGT...CGGCAGCAGCCCCTTCCAGCTCACGGCTTTCTCCGATGAAGACATTATAGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373386.6
CDS-3UTR TCA 90 bp TGGAGAGGGAACTGGCCGAGTGTGCAGAAGGTTTGGTCCAATAGATCACTGACATGCTTGCTATTTCTTTaGTCTCCATGCGAGACAGGG +
Preference number: 4 (lower is better)
Translates to: WRGNWPSVQKVWSNRSLTCLLFL*SPCETG
Trigger: CCCTGTCTCGCATGGAGATCAAAGAAATAGCAAGCA...TGTCAGTGATCTATTGGACCAAACCTTCTGCACACTCGGCCAGTTCCCTCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR GCA 90 bp ACCTTTATTACAAGGGGACTGATGGTTCCTGAACAGAAAGAAACAAAGGTCAGGGGAACAGACTTGCAGTaGCCCGGCTCCTCACTGCAG +
Preference number: 4 (lower is better)
Translates to: TFITRGLMVPEQKETKVRGTDLQ*PGSSLQ
Trigger: CTGCAGTGAGGAGCCGGGGCACTGCAAGTCTGTTCC...CCTGACCTTTGTTTCTTTCTGTTCAGGAACCATCAGTCCCCTTGTAATAAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373387.9
CDS-3UTR GCA 90 bp CTTCGCCAAGTACCAGGCAGGGCAGTTGCATTCTCATCTGAAGAGCCATTTTCCTCTGGGTTCTCTAAGTaGACGTCTGTTCTTCGCCAA +
Preference number: 4 (lower is better)
Translates to: LRQVPGRAVAFSSEEPFSSGFSK*TSVLRQ
Trigger: TTGGCGAAGAACAGACGTGCACTTAGAGAACCCAGA...GGAAAATGGCTCTTCAGATGAGAATGCAACTGCCCTGCCTGGTACTTGGCGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441134.5
ENST00000453030.5
CDS-3UTR GCA 90 bp TCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAAGGTTCAGTTTTAGTGCCTaGCCTATTCTAACAAACTCC +
Preference number: 4 (lower is better)
Translates to: SGKMAPDIGEGTGRVCRRFSFSA*PILTNS
Trigger: GGAGTTTGTTAGAATAGGGCAGGCACTAAAACTGAA...CCTTCTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR GCA 90 bp CGAGCATCTTTTCCTTTGTCTGCTCTGAGAACCAGAAGGTCCAGGGTCTCAAGCAGGGTCTCAAGCACATaGATTTGCTTCACTGGCAGA +
Preference number: 4 (lower is better)
Translates to: RASFPLSALRTRRSRVSSRVSST*ICFTGR
Trigger: TCTGCCAGTGAAGCAAATGCATGTGCTTGAGACCCT...GCTTGAGACCCTGGACCTTCTGGTTCTCAGAGCAGACAAAGGAAAAGATGCTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460176.6
CDS-3UTR GCA 90 bp TGGAGAGGGAACTGGCCGAGTGTGCAGAAGGTTTGGTCCAATAGATCACTGACAGAAAGCACAGACAATTaGATAGGGAGCCTGGTTCCA +
Preference number: 4 (lower is better)
Translates to: WRGNWPSVQKVWSNRSLTESTDN*IGSLVP
Trigger: TGGAACCAGGCTCCCTATGCAATTGTCTGTGCTTTC...TGTCAGTGATCTATTGGACCAAACCTTCTGCACACTCGGCCAGTTCCCTCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR GCA 90 bp AAAGAAACAAAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGGAAAGCACAGACAATTaGATAGGGAGCCTGGTTCCA +
Preference number: 4 (lower is better)
Translates to: KETKVRKDGTGHWRGNWPESTDN*IGSLVP
Trigger: TGGAACCAGGCTCCCTATGCAATTGTCTGTGCTTTC...CGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTTTGTTTCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR GCA 90 bp AGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAATTCACAGCTGCAGTTaGTGTGAAGTATATATCCGA +
Preference number: 4 (lower is better)
Translates to: RSGKMAPDIGEGTGRVCRIHSCS*CEVYIR
Trigger: TCGGATATATACTTCACAGCAACTGCAGCTGTGAAT...TCTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373387.9
ENST00000435213.6
CDS-3UTR GCA 90 bp ACAAGGGGACTGATGGTTCCTGAACAGAAAGAAACAAAGGTCAGGAAAGATGGCGGCCCAGTAGTTCCCTaGGGGTCCTGCTTGCTATTT +
Preference number: 4 (lower is better)
Translates to: TRGLMVPEQKETKVRKDGGPVVP*GSCLLF
Trigger: AAATAGCAAGCAGGACCCGCAGGGAACTACTGGGCC...GCCATCTTTCCTGACCTTTGTTTCTTTCTGTTCAGGAACCATCAGTCCCCTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR GCA 90 bp ACCTTTATTACAAGGGGACTGATGGTTCCTGAACAGAAAGAAACAAAGGTCAGGGCTGCCCTCTCTGTCTaGCACAGGGTCCTGGTCAGA +
Preference number: 4 (lower is better)
Translates to: TFITRGLMVPEQKETKVRAALSV*HRVLVR
Trigger: TCTGACCAGGACCCTGTGGCAGACAGAGAGGGCAGC...CCTGACCTTTGTTTCTTTCTGTTCAGGAACCATCAGTCCCCTTGTAATAAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR GCA 90 bp ACCACCTTTATTACAAGGGGACTGATGGTTCCTGAACAGAAAGAAACAAAGGTCGCTGCCCTCTCTGTCTaGCACAGGGTCCTGGTCAGA +
Preference number: 4 (lower is better)
Translates to: TTFITRGLMVPEQKETKVAALSV*HRVLVR
Trigger: TCTGACCAGGACCCTGTGGCAGACAGAGAGGGCAGC...GACCTTTGTTTCTTTCTGTTCAGGAACCATCAGTCCCCTTGTAATAAAGGTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR GCA 90 bp CAGAAAGAAACAAAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGGGAACTGGCCGAGTGTaGAGAAGGTTTGGTCCAATA +
Preference number: 4 (lower is better)
Translates to: QKETKVRKDGTGHWRGNWGTGRV*RRFGPI
Trigger: TATTGGACCAAACCTTCTGCACACTCGGCCAGTTCC...CCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTTTGTTTCTTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp GGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAATTATACATAGCGATCTaGCCACAAACCTTCTGCAAA +
Preference number: 4 (lower is better)
Translates to: GQERWHRTLERELAECAELYIAI*PQTFCK
Trigger: TTTGCAGAAGGTTTGTGGCCAGATCGCTATGTATAA...TTCTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373387.9
CDS-3UTR CCA 90 bp GGTCAGAAAGGGTCACGGACAAGAAGAAAGGGCTCTTCTCGGCATCGTTTCCAAAATCTTCCAGCCCTTTaGATGGCTCCATCAGCATCA +
Preference number: 4 (lower is better)
Translates to: GQKGSRTRRKGSSRHRFQNLPAL*MAPSAS
Trigger: TGATGCTGATGGAGCCATCCAAAGGGCTGGAAGATT...TTGGAAACGATGCCGAGAAGAGCCCTTTCTTCTTGTCCGTGACCCTTTCTGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429629.6
ENST00000441134.5
ENST00000453030.5
CDS-3UTR CCA 90 bp TCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAAGGAAATACCATCTGGTGTaGTATTCTGGGTTCTCTAAG +
Preference number: 4 (lower is better)
Translates to: SGKMAPDIGEGTGRVCRRKYHLV*YSGFSK
Trigger: CTTAGAGAACCCAGAATACCACACCAGATGGTATTT...CCTTCTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp AAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAAATACCATCTGGTGTaGTATTCTGGGTTCTCTAAG +
Preference number: 4 (lower is better)
Translates to: KVRKDGTGHWRGNWPSVQKYHLV*YSGFSK
Trigger: CTTAGAGAACCCAGAATACCACACCAGATGGTATTT...CTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp CATTGGAGAGGGAACTGGCCGAGTGTGCAGAAGGTTTGGTCCAATAGATCACTGCTGTGGTATCATTTTTaGTATCCAGACCGCCACGGT +
Preference number: 4 (lower is better)
Translates to: HWRGNWPSVQKVWSNRSLLWYHF*YPDRHG
Trigger: ACCGTGGCGGTCTGGATACCAAAAATGATACCACAG...CAGTGATCTATTGGACCAAACCTTCTGCACACTCGGCCAGTTCCCTCTCCAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp GGACTGATGGTTCCTGAACAGAAAGAAACAAAGGTCAGGAAAGATGGCACCGGAGTGGTCTGTAAACACTaGTGGAGTTGGCAAGGGAGG +
Preference number: 4 (lower is better)
Translates to: GLMVPEQKETKVRKDGTGVVCKH*WSWQGR
Trigger: CCTCCCTTGCCAACTCCACCAGTGTTTACAGACCAC...TCCGGTGCCATCTTTCCTGACCTTTGTTTCTTTCTGTTCAGGAACCATCAGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp ACAAGGGGACTGATGGTTCCTGAACAGAAAGAAACAAAGGTCAGGAAAGATGGCCTAACAAACTCCGCCTaGCGGGCCTCCTCTTTCTTC +
Preference number: 4 (lower is better)
Translates to: TRGLMVPEQKETKVRKDGLTNSA*RASSFF
Trigger: GAAGAAAGAGGAGGCCCGCCAGGCGGAGTTTGTTAG...GCCATCTTTCCTGACCTTTGTTTCTTTCTGTTCAGGAACCATCAGTCCCCTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp GCTGGTGACCCCGCTTGGCTTGTTGTGTTTTCTTGTGATCAGAAGCAGTTTATTCTAACAAACTCCGCCTaGCGGGCCTCCTCTTTCTTC +
Preference number: 4 (lower is better)
Translates to: AGDPAWLVVFSCDQKQFILTNSA*RASSFF
Trigger: GAAGAAAGAGGAGGCCCGCCAGGCGGAGTTTGTTAG...AATAAACTGCTTCTGATCACAAGAAAACACAACAAGCCAAGCGGGGTCACCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460176.6
CDS-3UTR CCA 90 bp CAAAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCTTAATAGCATACAGGTaGCAGCCTTTTGTTTTCTCC +
Preference number: 4 (lower is better)
Translates to: QRSGKMAPDIGEGTGRVCLIAYR*QPFVFS
Trigger: GGAGAAAACAAAAGGCTGCCACCTGTATGCTATTAA...GCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp AGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGATTAATAGCATACAGGTaGCAGCCTTTTGTTTTCTCC +
Preference number: 4 (lower is better)
Translates to: RSGKMAPDIGEGTGRVCRLIAYR*QPFVFS
Trigger: GGAGAAAACAAAAGGCTGCCACCTGTATGCTATTAA...TCTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp GGACTGATGGTTCCTGAACAGAAAGAAACAAAGGTCAGGAAAGATGGCACCGGAAGTATATATCCGACCTaGAGGCCACCAGCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: GLMVPEQKETKVRKDGTGSIYPT*RPPAAA
Trigger: AGCTGCAGCTGGTGGCCTCCAGGTCGGATATATACT...TCCGGTGCCATCTTTCCTGACCTTTGTTTCTTTCTGTTCAGGAACCATCAGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp ACAAGGGGACTGATGGTTCCTGAACAGAAAGAAACAAAGGTCAGGAAAGATGGCGCGCTCCTTCTGACTTaGGTCCACCTTCATCCGAGA +
Preference number: 4 (lower is better)
Translates to: TRGLMVPEQKETKVRKDGALLLT*VHLHPR
Trigger: TCTCGGATGAAGGTGGACCCAAGTCAGAAGGAGCGC...GCCATCTTTCCTGACCTTTGTTTCTTTCTGTTCAGGAACCATCAGTCCCCTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp GGACTGATGGTTCCTGAACAGAAAGAAACAAAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTaGCCGAGTGTGCAGAAGGTT +
Preference number: 4 (lower is better)
Translates to: GLMVPEQKETKVRKDGTGHWRGN*PSVQKV
Trigger: AACCTTCTGCACACTCGGCCAGTTCCCTCTCCAATG...TCCGGTGCCATCTTTCCTGACCTTTGTTTCTTTCTGTTCAGGAACCATCAGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp CTGTTTTTCTCCAAAGAATTGCACGGTATTGAGGGACACGTTGATTGTTTTGGTCTGGGCAGCTGTCCTTaGGCTCTCGAAGCTGCACCC +
Preference number: 4 (lower is better)
Translates to: LFFSKELHGIEGHVDCFGLGSCP*ALEAAP
Trigger: GGGTGCAGCTTCGAGAGCCCAAGGACAGCTGCCCAG...ACCAAAACAATCAACGTGTCCCTCAATACCGTGCAATTCTTTGGAGAAAAACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441134.5
CDS-3UTR TCA 90 bp AACAAAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTAACATGGTGGAAACATaGAACATGATCTCATGCCCT +
Preference number: 4 (lower is better)
Translates to: NKGQERWHRTLERELAECNMVET*NMISCP
Trigger: AGGGCATGAGATCATGTTTCATGTTTCCACCATGTT...ACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTTTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR TCA 90 bp ATTTCTTTGATCTCCATGCGAGACAGGGACAAGGAGTGCGTGACTGGAATGGCAGCACACACGGCTTCATaGGGGAAATTACTGCAGAAA +
Preference number: 4 (lower is better)
Translates to: ISLISMRDRDKECVTGMAAHTAS*GKLLQK
Trigger: TTTCTGCAGTAATTTCCCTCATGAAGCCGTGTGTGC...TGCCATTCCAGTCACGCACTCCTTGTCCCTGTCTCGCATGGAGATCAAAGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373386.6
CDS-3UTR TCA 90 bp TGGTTCCTGAACAGAAAGAAACAAAGGTCAGGAAAGATGGCACCGGACATTGGAGCAGAGCACTTAGCCTaGAGACAAAGAGGCGAGCAT +
Preference number: 4 (lower is better)
Translates to: WFLNRKKQRSGKMAPDIGAEHLA*RQRGEH
Trigger: ATGCTCGCCTCTTTGTCTTCAGGCTAAGTGCTCTGC...TCCAATGTCCGGTGCCATCTTTCCTGACCTTTGTTTCTTTCTGTTCAGGAACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR TCA 90 bp AAAGAAACAAAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGGATAAGCCACACAGATaGGATTGTCACTCTCTTCAG +
Preference number: 4 (lower is better)
Translates to: KETKVRKDGTGHWRGNWPDKPHR*DCHSLQ
Trigger: CTGAAGAGAGTGACAATCTCATCTGTGTGGCTTATC...CGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTTTGTTTCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR TCA 90 bp CATTGGAGAGGGAACTGGCCGAGTGTGCAGAAGGTTTGGTCCAATAGATCACTGACAGAACTGGAAATCTaGCGCAGAAGGTTGAACCAA +
Preference number: 4 (lower is better)
Translates to: HWRGNWPSVQKVWSNRSLTELEI*RRRLNQ
Trigger: TTGGTTCAACCTTCTGCGTCAGATTTCCAGTTCTGT...CAGTGATCTATTGGACCAAACCTTCTGCACACTCGGCCAGTTCCCTCTCCAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR TCA 90 bp ATTTCTTTGATCTCCATGCGAGACAGGGACAAGGAGTGCGTGACTGGAATGGCATGCTTGCTATTTCTTTaGTCTCCATGCGAGACAGGG +
Preference number: 4 (lower is better)
Translates to: ISLISMRDRDKECVTGMACLLFL*SPCETG
Trigger: CCCTGTCTCGCATGGAGATCAAAGAAATAGCAAGCA...TGCCATTCCAGTCACGCACTCCTTGTCCCTGTCTCGCATGGAGATCAAAGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373386.6
CDS-3UTR TCA 90 bp TGGTTCCTGAACAGAAAGAAACAAAGGTCAGGAAAGATGGCACCGGACATTGGAACTTTCCAAGGAGCCTaGTGGGATCCTGTCACTGCT +
Preference number: 4 (lower is better)
Translates to: WFLNRKKQRSGKMAPDIGTFQGA*WDPVTA
Trigger: AGCAGTGACAGGATCCCATCAGGCTCCTTGGAAAGT...TCCAATGTCCGGTGCCATCTTTCCTGACCTTTGTTTCTTTCTGTTCAGGAACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR TCA 90 bp AAAGAAACAAAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGGGTCCAATAGATCACTaGCAGGCTAAAAGCCACATT +
Preference number: 4 (lower is better)
Translates to: KETKVRKDGTGHWRGNWPGPIDH*QAKSHI
Trigger: AATGTGGCTTTTAGCCTGTCAGTGATCTATTGGACC...CGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTTTGTTTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR TCA 90 bp AGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAAGGTTTGGTCTCAATGCATGCAGTTTaGAAGTGTTCCAGATATTAC +
Preference number: 4 (lower is better)
Translates to: RWHRTLERELAECAEGLVSMHAV*KCSRYY
Trigger: GTAATATCTGGAACACTTTCAAACTGCATGCATTGA...GACCAAACCTTCTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435213.6
CDS-3UTR TCA 90 bp CACGGACAAGAAGAAAGGGCTCTTCTCGGCATCGTTTCCAATGTAGTTCTGATGATGGTTTGTGCTATCTaGCTCCCACAAGGCACCTTC +
Preference number: 4 (lower is better)
Translates to: HGQEERALLGIVSNVVLMMVCAI*LPQGTF
Trigger: GAAGGTGCCTTGTGGGAGTCAGATAGCACAAACCAT...CATCAGAACTACATTGGAAACGATGCCGAGAAGAGCCCTTTCTTCTTGTCCGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429629.6
ENST00000441134.5
ENST00000453030.5
CDS-3UTR TCA 90 bp TTGAAATACCATCTGGTGTGGTATTCTGGGTTCTCTAAGTGCACGTCTGTTCTTTTCGTTGGCCATGTCTaGAGGGGCTGGATGCCGAAG +
Preference number: 4 (lower is better)
Translates to: LKYHLVWYSGFSKCTSVLFVGHV*RGWMPK
Trigger: CTTCGGCATCCAGCCCCTTCAGACATGGCCAACGAA...AAGAACAGACGTGCACTTAGAGAACCCAGAATACCACACCAGATGGTATTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441134.5
ENST00000453030.5
CDS-3UTR TCA 90 bp TGCACGGTATTGAGGGACACGTTGATTGTTTTGGTCAGAAAGGGTCACGGACAAGACAGAGTTACAGGTTaGCCTGGGACTCTAGTTCAG +
Preference number: 4 (lower is better)
Translates to: CTVLRDTLIVLVRKGHGQDRVTG*PGTLVQ
Trigger: CTGAACTAGAGTCCCAGGTCAACCTGTAACTCTGTC...TTGTCCGTGACCCTTTCTGACCAAAACAATCAACGTGTCCCTCAATACCGTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441134.5
CDS-3UTR GCA 90 bp AACAAAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTTCATCATCAGTGAGCTaGCCATCTTTGGCAAAAAGA +
Preference number: 4 (lower is better)
Translates to: NKGQERWHRTLERELAECSSSVS*PSLAKR
Trigger: TCTTTTTGCCAAAGATGGGCAGCTCACTGATGATGA...ACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTTTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR GCA 90 bp ACAAGGGGACTGATGGTTCCTGAACAGAAAGAAACAAAGGTCAGGAAAGATGGCTCAGAGGTCGTTCGATaGTTCTGCCCACGAGGTTTC +
Preference number: 4 (lower is better)
Translates to: TRGLMVPEQKETKVRKDGSEVVR*FCPRGF
Trigger: GAAACCTCGTGGGCAGAAGCATCGAACGACCTCTGA...GCCATCTTTCCTGACCTTTGTTTCTTTCTGTTCAGGAACCATCAGTCCCCTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp CATTGGAGAGGGAACTGGCCGAGTGTGCAGAAGGTTTGGTCCAATAGATCACTGATATCGTTTCCAATGTaGCGTTTCCTTTCCACCTGC +
Preference number: 4 (lower is better)
Translates to: HWRGNWPSVQKVWSNRSLISFPM*RFLSTC
Trigger: GCAGGTGGAAAGGAAACGCCACATTGGAAACGATAT...CAGTGATCTATTGGACCAAACCTTCTGCACACTCGGCCAGTTCCCTCTCCAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp TGGAGAGGGAACTGGCCGAGTGTGCAGAAGGTTTGGTCCAATAGATCACTGACAATATCGTTTCCAATGTaGCGTTTCCTTTCCACCTGC +
Preference number: 4 (lower is better)
Translates to: WRGNWPSVQKVWSNRSLTISFPM*RFLSTC
Trigger: GCAGGTGGAAAGGAAACGCCACATTGGAAACGATAT...TGTCAGTGATCTATTGGACCAAACCTTCTGCACACTCGGCCAGTTCCCTCTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp AACAAAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTAAAATATGTGTAAAGTaGGAGCGGATCATGGAAGGC +
Preference number: 4 (lower is better)
Translates to: NKGQERWHRTLERELAECKICVK*ERIMEG
Trigger: GCCTTCCATGATCCGCTCCCACTTTACACATATTTT...ACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp TGCAGAGCACTTAGCCTGAAGACAAAGAGGCGAGCATCTTTTCCTTTGTCTGCTTCTTCCGCGCTGACTTaGGTGACTCTGGTAAGACAT +
Preference number: 4 (lower is better)
Translates to: CRALSLKTKRRASFPLSASSALT*VTLVRH
Trigger: ATGTCTTACCAGAGTCACCCAAGTCAGCGCGGAAGA...AGCAGACAAAGGAAAAGATGCTCGCCTCTTTGTCTTCAGGCTAAGTGCTCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460176.6
CDS-3UTR CCA 90 bp ACCTTTATTACAAGGGGACTGATGGTTCCTGAACAGAAAGAAACAAAGGTCAGGAGACGCCAGCATCAGTaGAAACCAGCAAGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: TFITRGLMVPEQKETKVRRRQHQ*KPARPG
Trigger: GCCAGGCCTTGCTGGTTTCCACTGATGCTGGCGTCT...CCTGACCTTTGTTTCTTTCTGTTCAGGAACCATCAGTCCCCTTGTAATAAAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp AAGTCTATAATGTCTTCATCGGAGAAAGCCGTGAGCTGGAAGGGGCTGCTGCCGATGCATTTGCTTCACTaGCAGAGTTCTGTCAAACAC +
Preference number: 4 (lower is better)
Translates to: KSIMSSSEKAVSWKGLLPMHLLH*QSSVKH
Trigger: GTGTTTGACAGAACTCTGCCAGTGAAGCAAATGCAT...CGGCAGCAGCCCCTTCCAGCTCACGGCTTTCTCCGATGAAGACATTATAGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373386.6
CDS-3UTR CCA 90 bp CAGAAAGAAACAAAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCTAAGGTCATCACCATaGGAGAGTCAGACAGACAGA +
Preference number: 4 (lower is better)
Translates to: QKETKVRKDGTGHWRGNWLRSSP*ESQTDR
Trigger: TCTGTCTGTCTGACTCTCCCATGGTGATGACCTTAG...CCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTTTGTTTCTTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp ACCTCAATGAAATCTACCACCTTTATTACAAGGGGACTGATGGTTCCTGAACAGCTGTTGGCCTCCACGTaGTGCAGCCTGAAGGCTTCT +
Preference number: 4 (lower is better)
Translates to: TSMKSTTFITRGLMVPEQLLAST*CSLKAS
Trigger: AGAAGCCTTCAGGCTGCACCACGTGGAGGCCAACAG...CTGTTCAGGAACCATCAGTCCCCTTGTAATAAAGGTGGTAGATTTCATTGAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp CATTGGAGAGGGAACTGGCCGAGTGTGCAGAAGGTTTGGTCCAATAGATCACTGTGGTTCCAACAGAACTaGAAATCTGACGCAGAAGGT +
Preference number: 4 (lower is better)
Translates to: HWRGNWPSVQKVWSNRSLWFQQN*KSDAEG
Trigger: ACCTTCTGCGTCAGATTTCCAGTTCTGTTGGAACCA...CAGTGATCTATTGGACCAAACCTTCTGCACACTCGGCCAGTTCCCTCTCCAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp AAGTCTATAATGTCTTCATCGGAGAAAGCCGTGAGCTGGAAGGGGCTGCTGCCGAGTGTGCAGAAGGTTTaGTCCAATAGATCACTGACA +
Preference number: 4 (lower is better)
Translates to: KSIMSSSEKAVSWKGLLPSVQKV*SNRSLT
Trigger: TGTCAGTGATCTATTGGACCAAACCTTCTGCACACT...CGGCAGCAGCCCCTTCCAGCTCACGGCTTTCTCCGATGAAGACATTATAGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373386.6
CDS-3UTR CCA 90 bp AACAAAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTAGTGTGCAGAAGGTTTaGTCCAATAGATCACTGACA +
Preference number: 4 (lower is better)
Translates to: NKGQERWHRTLERELAECSVQKV*SNRSLT
Trigger: TGTCAGTGATCTATTGGACCAAACCTTCTGCACACT...ACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTTTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp TTGAGGGACACGTTGATTGTTTTGGTCAGAAAGGGTCACGGACAAGAAGAAAGGTTCAGGGTCTTTCGTTaGCCATGTCTGAAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: LRDTLIVLVRKGHGQEERFRVFR*PCLKGL
Trigger: CAGCCCCTTCAGACATGGCCAACGAAAGACCCTGAA...CCTTTCTTCTTGTCCGTGACCCTTTCTGACCAAAACAATCAACGTGTCCCTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000429629.6
ENST00000441134.5
ENST00000453030.5
CDS-3UTR CCA 90 bp CACGTTGATTGTTTTGGTCAGAAAGGGTCACGGACAAGAAGAAAGGGCTCTTCTTTCAGGGTCTTTCGTTaGCCATGTCTGAAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: HVDCFGQKGSRTRRKGSSFRVFR*PCLKGL
Trigger: CAGCCCCTTCAGACATGGCCAACGAAAGACCCTGAA...AGAAGAGCCCTTTCTTCTTGTCCGTGACCCTTTCTGACCAAAACAATCAACGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000429629.6
ENST00000441134.5
ENST00000453030.5
CDS-3UTR CCA 90 bp CAGAAAGGGTCACGGACAAGAAGAAAGGGCTCTTCTCGGCATCGTTTCCAATGTAGTTACAGGTTGACCTaGGACTCTAGTTCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: QKGSRTRRKGSSRHRFQCSYRLT*DSSSGS
Trigger: AGACCCTGAACTAGAGTCCCAGGTCAACCTGTAACT...ACATTGGAAACGATGCCGAGAAGAGCCCTTTCTTCTTGTCCGTGACCCTTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441134.5
ENST00000453030.5
CDS-3UTR TCA 90 bp CTTTCTTCTAACCGCTTCCGGGGTTTTGATTTGGCCTTTGGCGCTCCTTCTGACAAAGAACCCCAAACTTaGAATTCACAGAGCCCTCTT +
Preference number: 4 (lower is better)
Translates to: LSSNRFRGFDLAFGAPSDKEPQT*NSQSPL
Trigger: AAGAGGGCTCTGTGAATTTCAAGTTTGGGGTTCTTT...GTCAGAAGGAGCGCCAAAGGCCAAATCAAAACCCCGGAAGCGGTTAGAAGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373386.6
CDS-3UTR TCA 90 bp AAAGAAACAAAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAAAGAACCCCAAACTTaGAATTCACAGAGCCCTCTT +
Preference number: 4 (lower is better)
Translates to: KETKVRKDGTGHWRGNWPKEPQT*NSQSPL
Trigger: AAGAGGGCTCTGTGAATTTCAAGTTTGGGGTTCTTT...CGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTTTGTTTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR TCA 90 bp CATTGGAGAGGGAACTGGCCGAGTGTGCAGAAGGTTTGGTCCAATAGATCACTGTGGAAACATGAAACATaGTCTCATGCCCTTGGTACA +
Preference number: 4 (lower is better)
Translates to: HWRGNWPSVQKVWSNRSLWKHET*SHALGT
Trigger: TGTACCAAGGGCATGAGATCATGTTTCATGTTTCCA...CAGTGATCTATTGGACCAAACCTTCTGCACACTCGGCCAGTTCCCTCTCCAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR TCA 90 bp CATTGGAGAGGGAACTGGCCGAGTGTGCAGAAGGTTTGGTCCAATAGATCACTGCTTGGAACACAATGGTaGCGATATCGTTTCCAATGT +
Preference number: 4 (lower is better)
Translates to: HWRGNWPSVQKVWSNRSLLGTQW*RYRFQC
Trigger: ACATTGGAAACGATATCGTCACCATTGTGTTCCAAG...CAGTGATCTATTGGACCAAACCTTCTGCACACTCGGCCAGTTCCCTCTCCAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR TCA 90 bp AAGAAACAAAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAACAGACAGATCTCCCTaGTGTACTGGAATTCTTCAA +
Preference number: 4 (lower is better)
Translates to: KKQRSGKMAPDIGEGTGRTDRSP*CTGILQ
Trigger: TTGAAGAATTCCAGTACATCAGGGAGATCTGTCTGT...TCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTTTGTTTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR TCA 90 bp CATTGGAGAGGGAACTGGCCGAGTGTGCAGAAGGTTTGGTCCAATAGATCACTGACAGACAGATCTCCCTaGTGTACTGGAATTCTTCAA +
Preference number: 4 (lower is better)
Translates to: HWRGNWPSVQKVWSNRSLTDRSP*CTGILQ
Trigger: TTGAAGAATTCCAGTACATCAGGGAGATCTGTCTGT...CAGTGATCTATTGGACCAAACCTTCTGCACACTCGGCCAGTTCCCTCTCCAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR TCA 90 bp ACCACCTTTATTACAAGGGGACTGATGGTTCCTGAACAGAAAGAAACAAAGGTCCTTTGGCGCTCCTTCTaGCTTGGGTCCACCTTCATC +
Preference number: 4 (lower is better)
Translates to: TTFITRGLMVPEQKETKVLWRSF*LGSTFI
Trigger: GATGAAGGTGGACCCAAGTCAGAAGGAGCGCCAAAG...GACCTTTGTTTCTTTCTGTTCAGGAACCATCAGTCCCCTTGTAATAAAGGTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR TCA 90 bp GGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAAGGTTTGGTCCAATAGATCATTATTACAAGGGGACTaGTGGTTCCTGAACAGAAAG +
Preference number: 4 (lower is better)
Translates to: GHWRGNWPSVQKVWSNRSLLQGD*WFLNRK
Trigger: CTTTCTGTTCAGGAACCATCAGTCCCCTTGTAATAA...TGATCTATTGGACCAAACCTTCTGCACACTCGGCCAGTTCCCTCTCCAATGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR TCA 90 bp CTGTTTTTCTCCAAAGAATTGCACGGTATTGAGGGACACGTTGATTGTTTTGGTTTCGTTGGCCATGTCTaGAGGGGCTGGATGCCGAAG +
Preference number: 4 (lower is better)
Translates to: LFFSKELHGIEGHVDCFGFVGHV*RGWMPK
Trigger: CTTCGGCATCCAGCCCCTTCAGACATGGCCAACGAA...ACCAAAACAATCAACGTGTCCCTCAATACCGTGCAATTCTTTGGAGAAAAACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000429629.6
ENST00000441134.5
ENST00000453030.5
CDS-3UTR TCA 90 bp CTTAGCCTGAAGACAAAGAGGCGAGCATCTTTTCCTTTGTCTGCTCTGAGAACCGTCAAACACGGGCACTaGTGGAAGGTCATCTCTTTT +
Preference number: 4 (lower is better)
Translates to: LSLKTKRRASFPLSALRTVKHGH*WKVISF
Trigger: AAAAGAGATGACCTTCCATCAGTGCCCGTGTTTGAC...GGTTCTCAGAGCAGACAAAGGAAAAGATGCTCGCCTCTTTGTCTTCAGGCTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460176.6
CDS-3UTR GCA 90 bp CTTTCTTCTAACCGCTTCCGGGGTTTTGATTTGGCCTTTGGCGCTCCTTCTGACTTTTCTCCAAAGAATTaGACGGTATTGAGGGACACG +
Preference number: 4 (lower is better)
Translates to: LSSNRFRGFDLAFGAPSDFSPKN*TVLRDT
Trigger: CGTGTCCCTCAATACCGTGCAATTCTTTGGAGAAAA...GTCAGAAGGAGCGCCAAAGGCCAAATCAAAACCCCGGAAGCGGTTAGAAGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373386.6
CDS-3UTR GCA 90 bp AAGAAACAAAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGATTTTCTCCAAAGAATTaGACGGTATTGAGGGACACG +
Preference number: 4 (lower is better)
Translates to: KKQRSGKMAPDIGEGTGRFSPKN*TVLRDT
Trigger: CGTGTCCCTCAATACCGTGCAATTCTTTGGAGAAAA...TCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTTTGTTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR GCA 90 bp GGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAAGGTTTGGTCCAATAGATCATCATCATCAGTGAGCTaGCCATCTTTGGCAAAAAGA +
Preference number: 4 (lower is better)
Translates to: GHWRGNWPSVQKVWSNRSSSSVS*PSLAKR
Trigger: TCTTTTTGCCAAAGATGGGCAGCTCACTGATGATGA...TGATCTATTGGACCAAACCTTCTGCACACTCGGCCAGTTCCCTCTCCAATGTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR GCA 90 bp AAGAAACAAAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGATCATCATCAGTGAGCTaGCCATCTTTGGCAAAAAGA +
Preference number: 4 (lower is better)
Translates to: KKQRSGKMAPDIGEGTGRSSSVS*PSLAKR
Trigger: TCTTTTTGCCAAAGATGGGCAGCTCACTGATGATGA...TCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTTTGTTTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR GCA 90 bp TTTGGCGCTCCTTCTGACTTGGGTCCACCTTCATCCGAGAGGCCCAGTAGTTCCTTAAGCATGTTCTTATaGAAATCTGGCATCAAATCC +
Preference number: 4 (lower is better)
Translates to: FGAPSDLGPPSSERPSSSLSMFL*KSGIKS
Trigger: GGATTTGATGCCAGATTTGCATAAGAACATGCTTAA...GGAACTACTGGGCCTCTCGGATGAAGGTGGACCCAAGTCAGAAGGAGCGCCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373386.6
CDS-3UTR GCA 90 bp CAAAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCTTAAGCATGTTCTTATaGAAATCTGGCATCAAATCC +
Preference number: 4 (lower is better)
Translates to: QRSGKMAPDIGEGTGRVCLSMFL*KSGIKS
Trigger: GGATTTGATGCCAGATTTGCATAAGAACATGCTTAA...GCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR GCA 90 bp AACAAAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTTTCAGTTTTAGTGCCTaGCCTATTCTAACAAACTCC +
Preference number: 4 (lower is better)
Translates to: NKGQERWHRTLERELAECFSFSA*PILTNS
Trigger: GGAGTTTGTTAGAATAGGGCAGGCACTAAAACTGAA...ACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR GCA 90 bp GCGAGCATCTTTTCCTTTGTCTGCTCTGAGAACCAGAAGGTCCAGGGTCTCAAGATCTTTTCCTTTGTCTaGTCTGAGAACCAGAAGGTC +
Preference number: 4 (lower is better)
Translates to: ASIFSFVCSENQKVQGLKIFSFV*SENQKV
Trigger: GACCTTCTGGTTCTCAGAGCAGACAAAGGAAAAGAT...CTTGAGACCCTGGACCTTCTGGTTCTCAGAGCAGACAAAGGAAAAGATGCTCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460176.6
CDS-3UTR GCA 90 bp CTGTTACTTCAAGTCTATAATGTCTTCATCGGAGAAAGCCGTGAGCTGGAAGGGGGAACTGGCCGAGTGTaGAGAAGGTTTGGTCCAATA +
Preference number: 4 (lower is better)
Translates to: LLLQVYNVFIGESRELEGGTGRV*RRFGPI
Trigger: TATTGGACCAAACCTTCTGCACACTCGGCCAGTTCC...CCCTTCCAGCTCACGGCTTTCTCCGATGAAGACATTATAGACTTGAAGTAACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373386.6
CDS-3UTR GCA 90 bp CATTGGAGAGGGAACTGGCCGAGTGTGCAGAAGGTTTGGTCCAATAGATCACTGAGTCTAATGGCATTCTaGTTCCACCATTTCACAGAG +
Preference number: 4 (lower is better)
Translates to: HWRGNWPSVQKVWSNRSLSLMAF*FHHFTE
Trigger: CTCTGTGAAATGGTGGAAGCAGAATGCCATTAGACT...CAGTGATCTATTGGACCAAACCTTCTGCACACTCGGCCAGTTCCCTCTCCAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435213.6
CDS-3UTR CCA 90 bp AAAGAAACAAAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGCTTCCGAGACAGAGCTaGAACAAAAATGCTTCATCA +
Preference number: 4 (lower is better)
Translates to: KETKVRKDGTGHWRGNWPLPRQS*NKNASS
Trigger: TGATGAAGCATTTTTGTTCCAGCTCTGTCTCGGAAG...CGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTTTGTTTCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373386.6
ENST00000373387.9
CDS-3UTR CCA 90 bp GGACTGATGGTTCCTGAACAGAAAGAAACAAAGGTCAGGAAAGATGGCACCGGAAATCTTCCAGCCCTTTaGATGGCTCCATCAGCATCA +
Preference number: 4 (lower is better)
Translates to: GLMVPEQKETKVRKDGTGNLPAL*MAPSAS
Trigger: TGATGCTGATGGAGCCATCCAAAGGGCTGGAAGATT...TCCGGTGCCATCTTTCCTGACCTTTGTTTCTTTCTGTTCAGGAACCATCAGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp GGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAAGGTTTGGTCCAATAGATCACAGAAAGAGTTTTTGTaGGACTGTAGGGAAGGCATA +
Preference number: 4 (lower is better)
Translates to: GHWRGNWPSVQKVWSNRSQKEFL*DCREGI
Trigger: TATGCCTTCCCTACAGTCCCACAAAAACTCTTTCTG...TGATCTATTGGACCAAACCTTCTGCACACTCGGCCAGTTCCCTCTCCAATGTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp TGGAGAGGGAACTGGCCGAGTGTGCAGAAGGTTTGGTCCAATAGATCACTGACAGCTGTTTGTTCTCTTTaGAATATGGCAACATGGTGG +
Preference number: 4 (lower is better)
Translates to: WRGNWPSVQKVWSNRSLTAVCSL*NMATWW
Trigger: CCACCATGTTGCCATATTCCAAAGAGAACAAACAGC...TGTCAGTGATCTATTGGACCAAACCTTCTGCACACTCGGCCAGTTCCCTCTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp GGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAAGGTTTGGTCCAATAGATCAGATTCCTCTCCTTCTTaGAACACAATGGTGACGATA +
Preference number: 4 (lower is better)
Translates to: GHWRGNWPSVQKVWSNRSDSSPS*NTMVTI
Trigger: TATCGTCACCATTGTGTTCCAAGAAGGAGAGGAATC...TGATCTATTGGACCAAACCTTCTGCACACTCGGCCAGTTCCCTCTCCAATGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp CATTGGAGAGGGAACTGGCCGAGTGTGCAGAAGGTTTGGTCCAATAGATCACTGAAAATATGTGTAAAGTaGGAGCGGATCATGGAAGGC +
Preference number: 4 (lower is better)
Translates to: HWRGNWPSVQKVWSNRSLKICVK*ERIMEG
Trigger: GCCTTCCATGATCCGCTCCCACTTTACACATATTTT...CAGTGATCTATTGGACCAAACCTTCTGCACACTCGGCCAGTTCCCTCTCCAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp CAGAAAGAAACAAAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGAAGTCCCTGAATTCCTaGTGGTCTGTAAACACTGGT +
Preference number: 4 (lower is better)
Translates to: QKETKVRKDGTGHWRGNWKSLNS*WSVNTG
Trigger: ACCAGTGTTTACAGACCACCAGGAATTCAGGGACTT...CCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTTTGTTTCTTTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp TGGTTCCTGAACAGAAAGAAACAAAGGTCAGGAAAGATGGCACCGGACATTGGATTACTGCAGAAACACTaGGGCTCCCACGGCTCTTTT +
Preference number: 4 (lower is better)
Translates to: WFLNRKKQRSGKMAPDIGLLQKH*GSHGSF
Trigger: AAAAGAGCCGTGGGAGCCCCAGTGTTTCTGCAGTAA...TCCAATGTCCGGTGCCATCTTTCCTGACCTTTGTTTCTTTCTGTTCAGGAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp CAGAAAGAAACAAAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGTGGTTCCAACAGAACTaGAAATCTGACGCAGAAGGT +
Preference number: 4 (lower is better)
Translates to: QKETKVRKDGTGHWRGNWWFQQN*KSDAEG
Trigger: ACCTTCTGCGTCAGATTTCCAGTTCTGTTGGAACCA...CCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTTTGTTTCTTTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp ACCTTTATTACAAGGGGACTGATGGTTCCTGAACAGAAAGAAACAAAGGTCAGGGGAAGAAGGAAATACTaGAGTATCTCGGCCCGGGGG +
Preference number: 4 (lower is better)
Translates to: TFITRGLMVPEQKETKVRGRRKY*SISARG
Trigger: CCCCCGGGCCGAGATACTCCAGTATTTCCTTCTTCC...CCTGACCTTTGTTTCTTTCTGTTCAGGAACCATCAGTCCCCTTGTAATAAAGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp ACCTTTATTACAAGGGGACTGATGGTTCCTGAACAGAAAGAAACAAAGGTCAGGGCGCTCCTTCTGACTTaGGTCCACCTTCATCCGAGA +
Preference number: 4 (lower is better)
Translates to: TFITRGLMVPEQKETKVRALLLT*VHLHPR
Trigger: TCTCGGATGAAGGTGGACCCAAGTCAGAAGGAGCGC...CCTGACCTTTGTTTCTTTCTGTTCAGGAACCATCAGTCCCCTTGTAATAAAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR TCA 90 bp CAGAAAGAAACAAAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCTTGGAACACAATGGTaGCGATATCGTTTCCAATGT +
Preference number: 4 (lower is better)
Translates to: QKETKVRKDGTGHWRGNWLGTQW*RYRFQC
Trigger: ACATTGGAAACGATATCGTCACCATTGTGTTCCAAG...CCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTTTGTTTCTTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR TCA 90 bp AAGAAACAAAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGATGGTACGCTCTCTTCTaGAAATATTTTCAGCCTGTA +
Preference number: 4 (lower is better)
Translates to: KKQRSGKMAPDIGEGTGRWYALF*KYFQPV
Trigger: TACAGGCTGAAAATATTTTCAGAAGAGAGCGTACCA...TCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTTTGTTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR TCA 90 bp ACCACCTTTATTACAAGGGGACTGATGGTTCCTGAACAGAAAGAAACAAAGGTCGTCAAACACGGGCACTaGTGGAAGGTCATCATCCAC +
Preference number: 4 (lower is better)
Translates to: TTFITRGLMVPEQKETKVVKHGH*WKVIIH
Trigger: GTGGATGATGACCTTCCATCAGTGCCCGTGTTTGAC...GACCTTTGTTTCTTTCTGTTCAGGAACCATCAGTCCCCTTGTAATAAAGGTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR TCA 90 bp ACCTCAATGAAATCTACCACCTTTATTACAAGGGGACTGATGGTTCCTGAACAGGCAGAGCACTTAGCCTaGAGACAAAGAGGCGAGCAT +
Preference number: 4 (lower is better)
Translates to: TSMKSTTFITRGLMVPEQAEHLA*RQRGEH
Trigger: ATGCTCGCCTCTTTGTCTTCAGGCTAAGTGCTCTGC...CTGTTCAGGAACCATCAGTCCCCTTGTAATAAAGGTGGTAGATTTCATTGAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR TCA 90 bp GGACTGATGGTTCCTGAACAGAAAGAAACAAAGGTCAGGAAAGATGGCACCGGAGATAAGCCACACAGATaGGATTGTCACTCTCTTCAG +
Preference number: 4 (lower is better)
Translates to: GLMVPEQKETKVRKDGTGDKPHR*DCHSLQ
Trigger: CTGAAGAGAGTGACAATCTCATCTGTGTGGCTTATC...TCCGGTGCCATCTTTCCTGACCTTTGTTTCTTTCTGTTCAGGAACCATCAGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR GCA 90 bp AGAAAGGGCTCTTCTCGGCATCGTTTCCAATGTAGTTCTGATGGACTTGTCCTATCTGGGTTCTCTAAGTaGACGTCTGTTCTTCGCCAA +
Preference number: 4 (lower is better)
Translates to: RKGSSRHRFQCSSDGLVLSGFSK*TSVLRQ
Trigger: TTGGCGAAGAACAGACGTGCACTTAGAGAACCCAGA...TAGGACAAGTCCATCAGAACTACATTGGAAACGATGCCGAGAAGAGCCCTTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429629.6
ENST00000441134.5
ENST00000453030.5
CDS-3UTR GCA 90 bp TTTGGTCAGAAAGGGTCACGGACAAGAAGAAAGGGCTCTTCTCGGCATCGTTTCTTTTCTCCAAAGAATTaGACGGTATTGAGGGACACG +
Preference number: 4 (lower is better)
Translates to: FGQKGSRTRRKGSSRHRFFSPKN*TVLRDT
Trigger: CGTGTCCCTCAATACCGTGCAATTCTTTGGAGAAAA...GAAACGATGCCGAGAAGAGCCCTTTCTTCTTGTCCGTGACCCTTTCTGACCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429629.6
ENST00000441134.5
ENST00000453030.5
CDS-3UTR GCA 90 bp ACAAGGGGACTGATGGTTCCTGAACAGAAAGAAACAAAGGTCAGGAAAGATGGCAGGGTCTCAAGCACATaGATTTGCTTCACTGGCAGA +
Preference number: 4 (lower is better)
Translates to: TRGLMVPEQKETKVRKDGRVSST*ICFTGR
Trigger: TCTGCCAGTGAAGCAAATGCATGTGCTTGAGACCCT...GCCATCTTTCCTGACCTTTGTTTCTTTCTGTTCAGGAACCATCAGTCCCCTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR GCA 90 bp CAGAAAGAAACAAAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCAGTTTATTCCGAATTaGAACCACAATCCTCAGCTC +
Preference number: 4 (lower is better)
Translates to: QKETKVRKDGTGHWRGNWQFIPN*NHNPQL
Trigger: GAGCTGAGGATTGTGGTTGCAATTCGGAATAAACTG...CCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTTTGTTTCTTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR GCA 90 bp AGGCCCTTTTGCAGAGCACTTAGCCTGAAGACAAAGAGGCGAGCATCTTTTCCTCAGTTTATTCCGAATTaGAACCACAATCCTCAGCTC +
Preference number: 4 (lower is better)
Translates to: RPFCRALSLKTKRRASFPQFIPN*NHNPQL
Trigger: GAGCTGAGGATTGTGGTTGCAATTCGGAATAAACTG...AGGAAAAGATGCTCGCCTCTTTGTCTTCAGGCTAAGTGCTCTGCAAAAGGGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460176.6
CDS-3UTR GCA 90 bp CAGAAAGAAACAAAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGGACCTCATTCACAGCTaGAGTTGCTGTGAAGTATAT +
Preference number: 4 (lower is better)
Translates to: QKETKVRKDGTGHWRGNWDLIHS*SCCEVY
Trigger: ATATACTTCACAGCAACTGCAGCTGTGAATGAGGTC...CCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTTTGTTTCTTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373387.9
ENST00000435213.6
CDS-3UTR GCA 90 bp AAGAAACAAAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGACAACACATCAATGCATaGAGTTTGAAAGTGTTCCAG +
Preference number: 4 (lower is better)
Translates to: KKQRSGKMAPDIGEGTGRQHINA*SLKVFQ
Trigger: CTGGAACACTTTCAAACTGCATGCATTGATGTGTTG...TCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTTTGTTTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435213.6
CDS-3UTR GCA 90 bp GGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAAGGTTTGGTCCAATAGATCATGGGCAACACATCAATaGATGCAGTTTGAAAGTGTT +
Preference number: 4 (lower is better)
Translates to: GHWRGNWPSVQKVWSNRSWATHQ*MQFESV
Trigger: AACACTTTCAAACTGCATGCATTGATGTGTTGCCCA...TGATCTATTGGACCAAACCTTCTGCACACTCGGCCAGTTCCCTCTCCAATGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435213.6
CDS-3UTR CCA 90 bp TGGTTCCTGAACAGAAAGAAACAAAGGTCAGGAAAGATGGCACCGGACATTGGAAATCTTCCAGCCCTTTaGATGGCTCCATCAGCATCA +
Preference number: 4 (lower is better)
Translates to: WFLNRKKQRSGKMAPDIGNLPAL*MAPSAS
Trigger: TGATGCTGATGGAGCCATCCAAAGGGCTGGAAGATT...TCCAATGTCCGGTGCCATCTTTCCTGACCTTTGTTTCTTTCTGTTCAGGAACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp TCACGGACAAGAAGAAAGGGCTCTTCTCGGCATCGTTTCCAATGTAGTTCTGATAATCTTCCAGCCCTTTaGATGGCTCCATCAGCATCA +
Preference number: 4 (lower is better)
Translates to: SRTRRKGSSRHRFQCSSDNLPAL*MAPSAS
Trigger: TGATGCTGATGGAGCCATCCAAAGGGCTGGAAGATT...ATCAGAACTACATTGGAAACGATGCCGAGAAGAGCCCTTTCTTCTTGTCCGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429629.6
ENST00000441134.5
ENST00000453030.5
CDS-3UTR CCA 90 bp GACACGTTGATTGTTTTGGTCAGAAAGGGTCACGGACAAGAAGAAAGGGCTCTTAATCTTCCAGCCCTTTaGATGGCTCCATCAGCATCA +
Preference number: 4 (lower is better)
Translates to: DTLIVLVRKGHGQEERALNLPAL*MAPSAS
Trigger: TGATGCTGATGGAGCCATCCAAAGGGCTGGAAGATT...AAGAGCCCTTTCTTCTTGTCCGTGACCCTTTCTGACCAAAACAATCAACGTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429629.6
ENST00000441134.5
ENST00000453030.5
CDS-3UTR CCA 90 bp AAAGAAACAAAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGGGAAGGCATATTTTCTaGGTACCTGTTTTTCTCCAA +
Preference number: 4 (lower is better)
Translates to: KETKVRKDGTGHWRGNWPGRHIF*VPVFLQ
Trigger: TTGGAGAAAAACAGGTACCCAGAAAATATGCCTTCC...CGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTTTGTTTCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp ACCACCTTTATTACAAGGGGACTGATGGTTCCTGAACAGAAAGAAACAAAGGTCGTACGCCGACGTTTCTaGGCAAATGTTGGGGTTTCC +
Preference number: 4 (lower is better)
Translates to: TTFITRGLMVPEQKETKVVRRRF*ANVGVS
Trigger: GGAAACCCCAACATTTGCCCAGAAACGTCGGCGTAC...GACCTTTGTTTCTTTCTGTTCAGGAACCATCAGTCCCCTTGTAATAAAGGTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp AAAGAGGCGAGCATCTTTTCCTTTGTCTGCTCTGAGAACCAGAAGGTCCAGGGTATGCATTTGCTTCACTaGCAGAGTTCTGTCAAACAC +
Preference number: 4 (lower is better)
Translates to: KEASIFSFVCSENQKVQGMHLLH*QSSVKH
Trigger: GTGTTTGACAGAACTCTGCCAGTGAAGCAAATGCAT...ACCCTGGACCTTCTGGTTCTCAGAGCAGACAAAGGAAAAGATGCTCGCCTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460176.6
CDS-3UTR CCA 90 bp TGGTTCCTGAACAGAAAGAAACAAAGGTCAGGAAAGATGGCACCGGACATTGGACTAAGGTCATCACCATaGGAGAGTCAGACAGACAGA +
Preference number: 4 (lower is better)
Translates to: WFLNRKKQRSGKMAPDIGLRSSP*ESQTDR
Trigger: TCTGTCTGTCTGACTCTCCCATGGTGATGACCTTAG...TCCAATGTCCGGTGCCATCTTTCCTGACCTTTGTTTCTTTCTGTTCAGGAACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR TCA 90 bp ACAAGGGGACTGATGGTTCCTGAACAGAAAGAAACAAAGGTCAGGAAAGATGGCCATAATGTTTCCTACTaGAATCCCCACGTCTACAGC +
Preference number: 4 (lower is better)
Translates to: TRGLMVPEQKETKVRKDGHNVSY*NPHVYS
Trigger: GCTGTAGACGTGGGGATTTCAGTAGGAAACATTATG...GCCATCTTTCCTGACCTTTGTTTCTTTCTGTTCAGGAACCATCAGTCCCCTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR TCA 90 bp TTGGATGGCTCCATCAGCATCACTGGAAATAAGCAGCTCCACAGATCCATAATGCATAATGTTTCCTACTaGAATCCCCACGTCTACAGC +
Preference number: 4 (lower is better)
Translates to: LDGSISITGNKQLHRSIMHNVSY*NPHVYS
Trigger: GCTGTAGACGTGGGGATTTCAGTAGGAAACATTATG...CATTATGGATCTGTGGAGCTGCTTATTTCCAGTGATGCTGATGGAGCCATCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441134.5
CDS-3UTR TCA 90 bp CAGAAAGAAACAAAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGTGGTACGCTCTCTTCTaGAAATATTTTCAGCCTGTA +
Preference number: 4 (lower is better)
Translates to: QKETKVRKDGTGHWRGNWWYALF*KYFQPV
Trigger: TACAGGCTGAAAATATTTTCAGAAGAGAGCGTACCA...CCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTTTGTTTCTTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR TCA 90 bp TGGTTCCTGAACAGAAAGAAACAAAGGTCAGGAAAGATGGCACCGGACATTGGAGATAAGCCACACAGATaGGATTGTCACTCTCTTCAG +
Preference number: 4 (lower is better)
Translates to: WFLNRKKQRSGKMAPDIGDKPHR*DCHSLQ
Trigger: CTGAAGAGAGTGACAATCTCATCTGTGTGGCTTATC...TCCAATGTCCGGTGCCATCTTTCCTGACCTTTGTTTCTTTCTGTTCAGGAACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR TCA 90 bp ACCTTTATTACAAGGGGACTGATGGTTCCTGAACAGAAAGAAACAAAGGTCAGGCAGCTGCAGTTGCTGTaGAGTATATATCCGACCTGG +
Preference number: 4 (lower is better)
Translates to: TFITRGLMVPEQKETKVRQLQLL*SIYPTW
Trigger: CCAGGTCGGATATATACTTCACAGCAACTGCAGCTG...CCTGACCTTTGTTTCTTTCTGTTCAGGAACCATCAGTCCCCTTGTAATAAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373387.9
ENST00000435213.6
CDS-3UTR TCA 90 bp TGGTTCCTGAACAGAAAGAAACAAAGGTCAGGAAAGATGGCACCGGACATTGGAGGTCCAATAGATCACTaGCAGGCTAAAAGCCACATT +
Preference number: 4 (lower is better)
Translates to: WFLNRKKQRSGKMAPDIGGPIDH*QAKSHI
Trigger: AATGTGGCTTTTAGCCTGTCAGTGATCTATTGGACC...TCCAATGTCCGGTGCCATCTTTCCTGACCTTTGTTTCTTTCTGTTCAGGAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR TCA 90 bp GGACTGATGGTTCCTGAACAGAAAGAAACAAAGGTCAGGAAAGATGGCACCGGATTATTACAAGGGGACTaGTGGTTCCTGAACAGAAAG +
Preference number: 4 (lower is better)
Translates to: GLMVPEQKETKVRKDGTGLLQGD*WFLNRK
Trigger: CTTTCTGTTCAGGAACCATCAGTCCCCTTGTAATAA...TCCGGTGCCATCTTTCCTGACCTTTGTTTCTTTCTGTTCAGGAACCATCAGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR TCA 90 bp CAGAAAGAGTTTTTGTGGGACTGTAGGGAAGGCATATTTTCTGGGTACCTGTTTATGGTTTGTGCTATCTaGCTCCCACAAGGCACCTTC +
Preference number: 4 (lower is better)
Translates to: QKEFLWDCREGIFSGYLFMVCAI*LPQGTF
Trigger: GAAGGTGCCTTGTGGGAGTCAGATAGCACAAACCAT...AAACAGGTACCCAGAAAATATGCCTTCCCTACAGTCCCACAAAAACTCTTTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000429629.6
ENST00000441134.5
CDS-3UTR TCA 90 bp CTGGGTACCTGTTTTTCTCCAAAGAATTGCACGGTATTGAGGGACACGTTGATTCTGGAAATAAGAGGTTaGCCTGGGACTCTAGTTCAG +
Preference number: 4 (lower is better)
Translates to: LGTCFSPKNCTVLRDTLILEIRG*PGTLVQ
Trigger: CTGAACTAGAGTCCCAGGTCAACCTCTTATTTCCAG...AATCAACGTGTCCCTCAATACCGTGCAATTCTTTGGAGAAAAACAGGTACCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000429629.6
CDS-3UTR GCA 90 bp ACAAGAAGAAAGGGCTCTTCTCGGCATCGTTTCCAATGTAGTTCTGATGGACTTTCTGGGTTCTCTAAGTaGACGTCTGTTCTTCGCCAA +
Preference number: 4 (lower is better)
Translates to: TRRKGSSRHRFQCSSDGLSGFSK*TSVLRQ
Trigger: TTGGCGAAGAACAGACGTGCACTTAGAGAACCCAGA...AAGTCCATCAGAACTACATTGGAAACGATGCCGAGAAGAGCCCTTTCTTCTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429629.6
ENST00000441134.5
ENST00000453030.5
CDS-3UTR GCA 90 bp GGACTGATGGTTCCTGAACAGAAAGAAACAAAGGTCAGGAAAGATGGCACCGGATTTTCTCCAAAGAATTaGACGGTATTGAGGGACACG +
Preference number: 4 (lower is better)
Translates to: GLMVPEQKETKVRKDGTGFSPKN*TVLRDT
Trigger: CGTGTCCCTCAATACCGTGCAATTCTTTGGAGAAAA...TCCGGTGCCATCTTTCCTGACCTTTGTTTCTTTCTGTTCAGGAACCATCAGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp CAGAAAGAAACAAAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGAAATACCATCTGGTGTaGTATTCTGGGTTCTCTAAG +
Preference number: 4 (lower is better)
Translates to: QKETKVRKDGTGHWRGNWKYHLV*YSGFSK
Trigger: CTTAGAGAACCCAGAATACCACACCAGATGGTATTT...CCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTTTGTTTCTTTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp AAAGAAACAAAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGTCATGGCACTTAAGATaGACTTCACAGAAAGAGTTT +
Preference number: 4 (lower is better)
Translates to: KETKVRKDGTGHWRGNWPSWHLR*TSQKEF
Trigger: AAACTCTTTCTGTGAAGTCCATCTTAAGTGCCATGA...CGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTTTGTTTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp AAGAAACAAAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAATTTGTCCAGATTCATaGCACTTAAGATGGACTTCA +
Preference number: 4 (lower is better)
Translates to: KKQRSGKMAPDIGEGTGRICPDS*HLRWTS
Trigger: TGAAGTCCATCTTAAGTGCCATGAATCTGGACAAAT...TCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTTTGTTTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp TGGAGAGGGAACTGGCCGAGTGTGCAGAAGGTTTGGTCCAATAGATCACTGACAATTTGTCCAGATTCATaGCACTTAAGATGGACTTCA +
Preference number: 4 (lower is better)
Translates to: WRGNWPSVQKVWSNRSLTICPDS*HLRWTS
Trigger: TGAAGTCCATCTTAAGTGCCATGAATCTGGACAAAT...TGTCAGTGATCTATTGGACCAAACCTTCTGCACACTCGGCCAGTTCCCTCTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp GGACTGATGGTTCCTGAACAGAAAGAAACAAAGGTCAGGAAAGATGGCACCGGAGATTCCTCTCCTTCTTaGAACACAATGGTGACGATA +
Preference number: 4 (lower is better)
Translates to: GLMVPEQKETKVRKDGTGDSSPS*NTMVTI
Trigger: TATCGTCACCATTGTGTTCCAAGAAGGAGAGGAATC...TCCGGTGCCATCTTTCCTGACCTTTGTTTCTTTCTGTTCAGGAACCATCAGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp ATTTCTTTGATCTCCATGCGAGACAGGGACAAGGAGTGCGTGACTGGAATGGCATTAATAGCATACAGGTaGCAGCCTTTTGTTTTCTCC +
Preference number: 4 (lower is better)
Translates to: ISLISMRDRDKECVTGMALIAYR*QPFVFS
Trigger: GGAGAAAACAAAAGGCTGCCACCTGTATGCTATTAA...TGCCATTCCAGTCACGCACTCCTTGTCCCTGTCTCGCATGGAGATCAAAGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373386.6
CDS-3UTR CCA 90 bp AAAGAGGCGAGCATCTTTTCCTTTGTCTGCTCTGAGAACCAGAAGGTCCAGGGTTTAATAGCATACAGGTaGCAGCCTTTTGTTTTCTCC +
Preference number: 4 (lower is better)
Translates to: KEASIFSFVCSENQKVQGLIAYR*QPFVFS
Trigger: GGAGAAAACAAAAGGCTGCCACCTGTATGCTATTAA...ACCCTGGACCTTCTGGTTCTCAGAGCAGACAAAGGAAAAGATGCTCGCCTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000460176.6
CDS-3UTR CCA 90 bp TACTTCAAGTCTATAATGTCTTCATCGGAGAAAGCCGTGAGCTGGAAGGGGCTGATCTCCCTGATGTACTaGAATTCTTCAACAGGTGAC +
Preference number: 4 (lower is better)
Translates to: YFKSIMSSSEKAVSWKGLISLMY*NSSTGD
Trigger: GTCACCTGTTGAAGAATTCCAGTACATCAGGGAGAT...CAGCCCCTTCCAGCTCACGGCTTTCTCCGATGAAGACATTATAGACTTGAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373386.6
CDS-3UTR CCA 90 bp CACGTTGATTGTTTTGGTCAGAAAGGGTCACGGACAAGAAGAAAGGGCTCTTCTAATAAGAGGTTGACCTaGGACTCTAGTTCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: HVDCFGQKGSRTRRKGSSNKRLT*DSSSGS
Trigger: AGACCCTGAACTAGAGTCCCAGGTCAACCTCTTATT...AGAAGAGCCCTTTCTTCTTGTCCGTGACCCTTTCTGACCAAAACAATCAACGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429629.6
CDS-3UTR CCA 90 bp ACAAGAAGAAAGGGCTCTTCTCGGCATCGTTTCCAATGTAGTTCTGATGGACTTAGTTACAGGTTGACCTaGGACTCTAGTTCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: TRRKGSSRHRFQCSSDGLSYRLT*DSSSGS
Trigger: AGACCCTGAACTAGAGTCCCAGGTCAACCTGTAACT...AAGTCCATCAGAACTACATTGGAAACGATGCCGAGAAGAGCCCTTTCTTCTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441134.5
ENST00000453030.5
3UTR CAA 72 bp AAGAATTGCACGGTATTGAGGGACACGTTGATTGTTTaGGTCAGAAAGGGTCACGGACAAGAAGAAAGGGCT +
Preference number: 4 (lower is better)
Translates to: KNCTVLRDTLIV*VRKGHGQEERA
Trigger: AGCCCTTTCTTCTTGTCCGTGACCCTTTCTGACCAAAACAATCAACGTGTCCCTCAATACCGTGCAATTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429629.6
ENST00000441134.5
ENST00000453030.5
3UTR CAA 72 bp GATAACAATGAGGTGCTGGTGACCCCGCTTGGCTTGTaGTGTTTTCTTGTGATCAGAAGCAGTTTATTCCGA +
Preference number: 4 (lower is better)
Translates to: DNNEVLVTPLGL*CFLVIRSSLFR
Trigger: TCGGAATAAACTGCTTCTGATCACAAGAAAACACAACAAGCCAAGCGGGGTCACCAGCACCTCATTGTTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460176.6
CDS-3UTR TCA 90 bp ACCTTTATTACAAGGGGACTGATGGTTCCTGAACAGAAAGAAACAAAGGTCAGGAGCCATTTTCCACTCTaGATCTTCCAGCCCTTTGGA +
Preference number: 4 (lower is better)
Translates to: TFITRGLMVPEQKETKVRSHFPL*IFQPFG
Trigger: TCCAAAGGGCTGGAAGATTCAGAGTGGAAAATGGCT...CCTGACCTTTGTTTCTTTCTGTTCAGGAACCATCAGTCCCCTTGTAATAAAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR TCA 90 bp GGACTGATGGTTCCTGAACAGAAAGAAACAAAGGTCAGGAAAGATGGCACCGGATGGTACGCTCTCTTCTaGAAATATTTTCAGCCTGTA +
Preference number: 4 (lower is better)
Translates to: GLMVPEQKETKVRKDGTGWYALF*KYFQPV
Trigger: TACAGGCTGAAAATATTTTCAGAAGAGAGCGTACCA...TCCGGTGCCATCTTTCCTGACCTTTGTTTCTTTCTGTTCAGGAACCATCAGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR TCA 90 bp GTGGTGAGTGTTAATAGCATACAGGTGGCAGCCTTTTGTTTTCTCCAACTTGTTAGCTCTCTGCTGTGGTaGGTGTTAATAGCATACAGG +
Preference number: 4 (lower is better)
Translates to: VVSVNSIQVAAFCFLQLVSSLLW*VLIAYR
Trigger: CCTGTATGCTATTAACACTCACCACAGCAGAGAGCT...AACAAGTTGGAGAAAACAAAAGGCTGCCACCTGTATGCTATTAACACTCACCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460176.6
CDS-3UTR TCA 90 bp TGGTTCCTGAACAGAAAGAAACAAAGGTCAGGAAAGATGGCACCGGACATTGGAACAGACAGATCTCCCTaGTGTACTGGAATTCTTCAA +
Preference number: 4 (lower is better)
Translates to: WFLNRKKQRSGKMAPDIGTDRSP*CTGILQ
Trigger: TTGAAGAATTCCAGTACATCAGGGAGATCTGTCTGT...TCCAATGTCCGGTGCCATCTTTCCTGACCTTTGTTTCTTTCTGTTCAGGAACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR GCA 90 bp ACAAGGGGACTGATGGTTCCTGAACAGAAAGAAACAAAGGTCAGGAAAGATGGCATTTGCAAAAAGGGCTaGTATGGAACAGACTTGCAG +
Preference number: 4 (lower is better)
Translates to: TRGLMVPEQKETKVRKDGICKKG*YGTDLQ
Trigger: CTGCAAGTCTGTTCCATAGCAGCCCTTTTTGCAAAT...GCCATCTTTCCTGACCTTTGTTTCTTTCTGTTCAGGAACCATCAGTCCCCTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373387.9
CDS-3UTR GCA 90 bp AGAAGAAAGGGCTCTTCTCGGCATCGTTTCCAATGTAGTTCTGATGGACTTGTCTTTTCTCCAAAGAATTaGACGGTATTGAGGGACACG +
Preference number: 4 (lower is better)
Translates to: RRKGSSRHRFQCSSDGLVFSPKN*TVLRDT
Trigger: CGTGTCCCTCAATACCGTGCAATTCTTTGGAGAAAA...GACAAGTCCATCAGAACTACATTGGAAACGATGCCGAGAAGAGCCCTTTCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429629.6
ENST00000441134.5
ENST00000453030.5
CDS-3UTR GCA 90 bp AGAGCACTTAGCCTGAAGACAAAGAGGCGAGCATCTTTTCCTTTGTCTGCTCTGTTCAGTTTTAGTGCCTaGCCTATTCTAACAAACTCC +
Preference number: 4 (lower is better)
Translates to: RALSLKTKRRASFPLSALFSFSA*PILTNS
Trigger: GGAGTTTGTTAGAATAGGGCAGGCACTAAAACTGAA...CAGAGCAGACAAAGGAAAAGATGCTCGCCTCTTTGTCTTCAGGCTAAGTGCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460176.6
CDS-3UTR GCA 90 bp ACCTCAATGAAATCTACCACCTTTATTACAAGGGGACTGATGGTTCCTGAACAGGAAAGCACAGACAATTaGATAGGGAGCCTGGTTCCA +
Preference number: 4 (lower is better)
Translates to: TSMKSTTFITRGLMVPEQESTDN*IGSLVP
Trigger: TGGAACCAGGCTCCCTATGCAATTGTCTGTGCTTTC...CTGTTCAGGAACCATCAGTCCCCTTGTAATAAAGGTGGTAGATTTCATTGAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp ACAAGGGGACTGATGGTTCCTGAACAGAAAGAAACAAAGGTCAGGAAAGATGGCCTTCCGAGACAGAGCTaGAACAAAAATGCTTCATCA +
Preference number: 4 (lower is better)
Translates to: TRGLMVPEQKETKVRKDGLPRQS*NKNASS
Trigger: TGATGAAGCATTTTTGTTCCAGCTCTGTCTCGGAAG...GCCATCTTTCCTGACCTTTGTTTCTTTCTGTTCAGGAACCATCAGTCCCCTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373386.6
ENST00000373387.9
CDS-3UTR CCA 90 bp TGCACGGTATTGAGGGACACGTTGATTGTTTTGGTCAGAAAGGGTCACGGACAAAAATACCATCTGGTGTaGTATTCTGGGTTCTCTAAG +
Preference number: 4 (lower is better)
Translates to: CTVLRDTLIVLVRKGHGQKYHLV*YSGFSK
Trigger: CTTAGAGAACCCAGAATACCACACCAGATGGTATTT...TTGTCCGTGACCCTTTCTGACCAAAACAATCAACGTGTCCCTCAATACCGTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000429629.6
ENST00000441134.5
ENST00000453030.5
CDS-3UTR CCA 90 bp GAATTGCACGGTATTGAGGGACACGTTGATTGTTTTGGTCAGAAAGGGTCACGGAAATACCATCTGGTGTaGTATTCTGGGTTCTCTAAG +
Preference number: 4 (lower is better)
Translates to: ELHGIEGHVDCFGQKGSRKYHLV*YSGFSK
Trigger: CTTAGAGAACCCAGAATACCACACCAGATGGTATTT...CCGTGACCCTTTCTGACCAAAACAATCAACGTGTCCCTCAATACCGTGCAATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429629.6
ENST00000441134.5
ENST00000453030.5
CDS-3UTR CCA 90 bp ACAAGGGGACTGATGGTTCCTGAACAGAAAGAAACAAAGGTCAGGAAAGATGGCCAGAAAGAGTTTTTGTaGGACTGTAGGGAAGGCATA +
Preference number: 4 (lower is better)
Translates to: TRGLMVPEQKETKVRKDGQKEFL*DCREGI
Trigger: TATGCCTTCCCTACAGTCCCACAAAAACTCTTTCTG...GCCATCTTTCCTGACCTTTGTTTCTTTCTGTTCAGGAACCATCAGTCCCCTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp ATTTCTTTGATCTCCATGCGAGACAGGGACAAGGAGTGCGTGACTGGAATGGCATCATGGCACTTAAGATaGACTTCACAGAAAGAGTTT +
Preference number: 4 (lower is better)
Translates to: ISLISMRDRDKECVTGMASWHLR*TSQKEF
Trigger: AAACTCTTTCTGTGAAGTCCATCTTAAGTGCCATGA...TGCCATTCCAGTCACGCACTCCTTGTCCCTGTCTCGCATGGAGATCAAAGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373386.6
CDS-3UTR CCA 90 bp CAGAAAGAAACAAAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGTCATGGCACTTAAGATaGACTTCACAGAAAGAGTTT +
Preference number: 4 (lower is better)
Translates to: QKETKVRKDGTGHWRGNWSWHLR*TSQKEF
Trigger: AAACTCTTTCTGTGAAGTCCATCTTAAGTGCCATGA...CCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTTTGTTTCTTTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp CAGAAAGAAACAAAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGATTTGTCCAGATTCATaGCACTTAAGATGGACTTCA +
Preference number: 4 (lower is better)
Translates to: QKETKVRKDGTGHWRGNWICPDS*HLRWTS
Trigger: TGAAGTCCATCTTAAGTGCCATGAATCTGGACAAAT...CCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTTTGTTTCTTTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp ACAAGGGGACTGATGGTTCCTGAACAGAAAGAAACAAAGGTCAGGAAAGATGGCTTTCTGGGCAAATGTTaGGGTTTCCAAAGTGGCTTT +
Preference number: 4 (lower is better)
Translates to: TRGLMVPEQKETKVRKDGFLGKC*GFQSGF
Trigger: AAAGCCACTTTGGAAACCCCAACATTTGCCCAGAAA...GCCATCTTTCCTGACCTTTGTTTCTTTCTGTTCAGGAACCATCAGTCCCCTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp GAATTGCACGGTATTGAGGGACACGTTGATTGTTTTGGTCAGAAAGGGTCACGGTTGCTTTCCATAGAATaGTTTGTGCTATCTGACTCC +
Preference number: 4 (lower is better)
Translates to: ELHGIEGHVDCFGQKGSRLLSIE*FVLSDS
Trigger: GGAGTCAGATAGCACAAACCATTCTATGGAAAGCAA...CCGTGACCCTTTCTGACCAAAACAATCAACGTGTCCCTCAATACCGTGCAATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429629.6
ENST00000441134.5
ENST00000453030.5
3UTR CAA 72 bp CTGGGTACCTGTTTTTCTCCAAAGAATTGCACGGTATaGAGGGACACGTTGATTGTTTTGGTCAGAAAGGGT +
Preference number: 4 (lower is better)
Translates to: LGTCFSPKNCTV*RDTLIVLVRKG
Trigger: ACCCTTTCTGACCAAAACAATCAACGTGTCCCTCAATACCGTGCAATTCTTTGGAGAAAAACAGGTACCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000429629.6
ENST00000441134.5
CDS-3UTR TCA 90 bp ACCTTTATTACAAGGGGACTGATGGTTCCTGAACAGAAAGAAACAAAGGTCAGGGGTCCAATAGATCACTaGCAGGCTAAAAGCCACATT +
Preference number: 4 (lower is better)
Translates to: TFITRGLMVPEQKETKVRGPIDH*QAKSHI
Trigger: AATGTGGCTTTTAGCCTGTCAGTGATCTATTGGACC...CCTGACCTTTGTTTCTTTCTGTTCAGGAACCATCAGTCCCCTTGTAATAAAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR GCA 90 bp ATTGAGGGACACGTTGATTGTTTTGGTCAGAAAGGGTCACGGACAAGAAGAAAGTTTTCTCCAAAGAATTaGACGGTATTGAGGGACACG +
Preference number: 4 (lower is better)
Translates to: IEGHVDCFGQKGSRTRRKFSPKN*TVLRDT
Trigger: CGTGTCCCTCAATACCGTGCAATTCTTTGGAGAAAA...CTTTCTTCTTGTCCGTGACCCTTTCTGACCAAAACAATCAACGTGTCCCTCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000429629.6
ENST00000441134.5
ENST00000453030.5
CDS-3UTR GCA 90 bp GTGGTGAGTGTTAATAGCATACAGGTGGCAGCCTTTTGTTTTCTCCAACTTGTTTCAAGCACATGCATTTaGTTCACTGGCAGAGTTCTG +
Preference number: 4 (lower is better)
Translates to: VVSVNSIQVAAFCFLQLVSSTCI*FTGRVL
Trigger: CAGAACTCTGCCAGTGAAGCAAATGCATGTGCTTGA...AACAAGTTGGAGAAAACAAAAGGCTGCCACCTGTATGCTATTAACACTCACCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460176.6
CDS-3UTR GCA 90 bp TGGTTCCTGAACAGAAAGAAACAAAGGTCAGGAAAGATGGCACCGGACATTGGAATTCACAGCTGCAGTTaGTGTGAAGTATATATCCGA +
Preference number: 4 (lower is better)
Translates to: WFLNRKKQRSGKMAPDIGIHSCS*CEVYIR
Trigger: TCGGATATATACTTCACAGCAACTGCAGCTGTGAAT...TCCAATGTCCGGTGCCATCTTTCCTGACCTTTGTTTCTTTCTGTTCAGGAACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp AGAAAGGGCTCTTCTCGGCATCGTTTCCAATGTAGTTCTGATGGACTTGTCCTAGGAAGGCATATTTTCTaGGTACCTGTTTTTCTCCAA +
Preference number: 4 (lower is better)
Translates to: RKGSSRHRFQCSSDGLVLGRHIF*VPVFLQ
Trigger: TTGGAGAAAAACAGGTACCCAGAAAATATGCCTTCC...TAGGACAAGTCCATCAGAACTACATTGGAAACGATGCCGAGAAGAGCCCTTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000429629.6
ENST00000441134.5
CDS-3UTR CCA 90 bp TTGGATGGCTCCATCAGCATCACTGGAAATAAGCAGCTCCACAGATCCATAATGGGAAGGCATATTTTCTaGGTACCTGTTTTTCTCCAA +
Preference number: 4 (lower is better)
Translates to: LDGSISITGNKQLHRSIMGRHIF*VPVFLQ
Trigger: TTGGAGAAAAACAGGTACCCAGAAAATATGCCTTCC...CATTATGGATCTGTGGAGCTGCTTATTTCCAGTGATGCTGATGGAGCCATCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441134.5
CDS-3UTR CCA 90 bp TTTCTGGGTACCTGTTTTTCTCCAAAGAATTGCACGGTATTGAGGGACACGTTGCAGAAAGAGTTTTTGTaGGACTGTAGGGAAGGCATA +
Preference number: 4 (lower is better)
Translates to: FLGTCFSPKNCTVLRDTLQKEFL*DCREGI
Trigger: TATGCCTTCCCTACAGTCCCACAAAAACTCTTTCTG...CAACGTGTCCCTCAATACCGTGCAATTCTTTGGAGAAAAACAGGTACCCAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000429629.6
ENST00000441134.5
CDS-3UTR CCA 90 bp AATTGCACGGTATTGAGGGACACGTTGATTGTTTTGGTCAGAAAGGGTCACGGATTGCTTTCCATAGAATaGTTTGTGCTATCTGACTCC +
Preference number: 4 (lower is better)
Translates to: NCTVLRDTLIVLVRKGHGLLSIE*FVLSDS
Trigger: GGAGTCAGATAGCACAAACCATTCTATGGAAAGCAA...TCCGTGACCCTTTCTGACCAAAACAATCAACGTGTCCCTCAATACCGTGCAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429629.6
ENST00000441134.5
ENST00000453030.5
3UTR CAA 72 bp TTTTCTCCAAAGAATTGCACGGTATTGAGGGACACGTaGATTGTTTTGGTCAGAAAGGGTCACGGACAAGAA +
Preference number: 4 (lower is better)
Translates to: FSPKNCTVLRDT*IVLVRKGHGQE
Trigger: TTCTTGTCCGTGACCCTTTCTGACCAAAACAATCAACGTGTCCCTCAATACCGTGCAATTCTTTGGAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000429629.6
ENST00000441134.5
ENST00000453030.5
3UTR CAA 72 bp TCATGGCACTTAAGATGGACTTCACAGAAAGAGTTTTaGTGGGACTGTAGGGAAGGCATATTTTCTGGGTAC +
Preference number: 4 (lower is better)
Translates to: SWHLRWTSQKEF*WDCREGIFSGY
Trigger: GTACCCAGAAAATATGCCTTCCCTACAGTCCCACAAAAACTCTTTCTGTGAAGTCCATCTTAAGTGCCATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429629.6
CDS-3UTR TCA 90 bp ACCACCTTTATTACAAGGGGACTGATGGTTCCTGAACAGAAAGAAACAAAGGTCAAAGAACCCCAAACTTaGAATTCACAGAGCCCTCTT +
Preference number: 4 (lower is better)
Translates to: TTFITRGLMVPEQKETKVKEPQT*NSQSPL
Trigger: AAGAGGGCTCTGTGAATTTCAAGTTTGGGGTTCTTT...GACCTTTGTTTCTTTCTGTTCAGGAACCATCAGTCCCCTTGTAATAAAGGTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR GCA 90 bp TGGTTCCTGAACAGAAAGAAACAAAGGTCAGGAAAGATGGCACCGGACATTGGAAAATCAACTACCATTTaGAAAAAGGGCTGCTATGGA +
Preference number: 4 (lower is better)
Translates to: WFLNRKKQRSGKMAPDIGKSTTI*KKGCYG
Trigger: TCCATAGCAGCCCTTTTTGCAAATGGTAGTTGATTT...TCCAATGTCCGGTGCCATCTTTCCTGACCTTTGTTTCTTTCTGTTCAGGAACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373387.9
CDS-3UTR GCA 90 bp ACCTTTATTACAAGGGGACTGATGGTTCCTGAACAGAAAGAAACAAAGGTCAGGATCTTTTCCTTTGTCTaGTCTGAGAACCAGAAGGTC +
Preference number: 4 (lower is better)
Translates to: TFITRGLMVPEQKETKVRIFSFV*SENQKV
Trigger: GACCTTCTGGTTCTCAGAGCAGACAAAGGAAAAGAT...CCTGACCTTTGTTTCTTTCTGTTCAGGAACCATCAGTCCCCTTGTAATAAAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR GCA 90 bp ACCACCTTTATTACAAGGGGACTGATGGTTCCTGAACAGAAAGAAACAAAGGTCGACCTCATTCACAGCTaGAGTTGCTGTGAAGTATAT +
Preference number: 4 (lower is better)
Translates to: TTFITRGLMVPEQKETKVDLIHS*SCCEVY
Trigger: ATATACTTCACAGCAACTGCAGCTGTGAATGAGGTC...GACCTTTGTTTCTTTCTGTTCAGGAACCATCAGTCCCCTTGTAATAAAGGTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp TTTCTGGGTACCTGTTTTTCTCCAAAGAATTGCACGGTATTGAGGGACACGTTGAAATACCATCTGGTGTaGTATTCTGGGTTCTCTAAG +
Preference number: 4 (lower is better)
Translates to: FLGTCFSPKNCTVLRDTLKYHLV*YSGFSK
Trigger: CTTAGAGAACCCAGAATACCACACCAGATGGTATTT...CAACGTGTCCCTCAATACCGTGCAATTCTTTGGAGAAAAACAGGTACCCAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000429629.6
ENST00000441134.5
CDS-3UTR CCA 90 bp ACCACCTTTATTACAAGGGGACTGATGGTTCCTGAACAGAAAGAAACAAAGGTCCAGAAAGAGTTTTTGTaGGACTGTAGGGAAGGCATA +
Preference number: 4 (lower is better)
Translates to: TTFITRGLMVPEQKETKVQKEFL*DCREGI
Trigger: TATGCCTTCCCTACAGTCCCACAAAAACTCTTTCTG...GACCTTTGTTTCTTTCTGTTCAGGAACCATCAGTCCCCTTGTAATAAAGGTGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp ACCTTTATTACAAGGGGACTGATGGTTCCTGAACAGAAAGAAACAAAGGTCAGGGCTGTTTGTTCTCTTTaGAATATGGCAACATGGTGG +
Preference number: 4 (lower is better)
Translates to: TFITRGLMVPEQKETKVRAVCSL*NMATWW
Trigger: CCACCATGTTGCCATATTCCAAAGAGAACAAACAGC...CCTGACCTTTGTTTCTTTCTGTTCAGGAACCATCAGTCCCCTTGTAATAAAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp ACCACCTTTATTACAAGGGGACTGATGGTTCCTGAACAGAAAGAAACAAAGGTCGCTGTTTGTTCTCTTTaGAATATGGCAACATGGTGG +
Preference number: 4 (lower is better)
Translates to: TTFITRGLMVPEQKETKVAVCSL*NMATWW
Trigger: CCACCATGTTGCCATATTCCAAAGAGAACAAACAGC...GACCTTTGTTTCTTTCTGTTCAGGAACCATCAGTCCCCTTGTAATAAAGGTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp ACCTCAATGAAATCTACCACCTTTATTACAAGGGGACTGATGGTTCCTGAACAGATGCATTTGCTTCACTaGCAGAGTTCTGTCAAACAC +
Preference number: 4 (lower is better)
Translates to: TSMKSTTFITRGLMVPEQMHLLH*QSSVKH
Trigger: GTGTTTGACAGAACTCTGCCAGTGAAGCAAATGCAT...CTGTTCAGGAACCATCAGTCCCCTTGTAATAAAGGTGGTAGATTTCATTGAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp ACAAGAAGAAAGGGCTCTTCTCGGCATCGTTTCCAATGTAGTTCTGATGGACTTTTGCTTTCCATAGAATaGTTTGTGCTATCTGACTCC +
Preference number: 4 (lower is better)
Translates to: TRRKGSSRHRFQCSSDGLLLSIE*FVLSDS
Trigger: GGAGTCAGATAGCACAAACCATTCTATGGAAAGCAA...AAGTCCATCAGAACTACATTGGAAACGATGCCGAGAAGAGCCCTTTCTTCTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429629.6
ENST00000441134.5
ENST00000453030.5
CDS-3UTR TCA 90 bp ACCTCAATGAAATCTACCACCTTTATTACAAGGGGACTGATGGTTCCTGAACAGGTACACAGTATAAACTaGATGTATCCCTGTGGTATC +
Preference number: 4 (lower is better)
Translates to: TSMKSTTFITRGLMVPEQVHSIN*MYPCGI
Trigger: GATACCACAGGGATACATTCAGTTTATACTGTGTAC...CTGTTCAGGAACCATCAGTCCCCTTGTAATAAAGGTGGTAGATTTCATTGAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR GCA 90 bp TGGTTCCTGAACAGAAAGAAACAAAGGTCAGGAAAGATGGCACCGGACATTGGATTAAGCATGTTCTTATaGAAATCTGGCATCAAATCC +
Preference number: 4 (lower is better)
Translates to: WFLNRKKQRSGKMAPDIGLSMFL*KSGIKS
Trigger: GGATTTGATGCCAGATTTGCATAAGAACATGCTTAA...TCCAATGTCCGGTGCCATCTTTCCTGACCTTTGTTTCTTTCTGTTCAGGAACCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR GCA 90 bp ACCTTTATTACAAGGGGACTGATGGTTCCTGAACAGAAAGAAACAAAGGTCAGGTTCAGTTTTAGTGCCTaGCCTATTCTAACAAACTCC +
Preference number: 4 (lower is better)
Translates to: TFITRGLMVPEQKETKVRFSFSA*PILTNS
Trigger: GGAGTTTGTTAGAATAGGGCAGGCACTAAAACTGAA...CCTGACCTTTGTTTCTTTCTGTTCAGGAACCATCAGTCCCCTTGTAATAAAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp ACCACCTTTATTACAAGGGGACTGATGGTTCCTGAACAGAAAGAAACAAAGGTCGGAAGGCATATTTTCTaGGTACCTGTTTTTCTCCAA +
Preference number: 4 (lower is better)
Translates to: TTFITRGLMVPEQKETKVGRHIF*VPVFLQ
Trigger: TTGGAGAAAAACAGGTACCCAGAAAATATGCCTTCC...GACCTTTGTTTCTTTCTGTTCAGGAACCATCAGTCCCCTTGTAATAAAGGTGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CCA 90 bp TTTCTGGGTACCTGTTTTTCTCCAAAGAATTGCACGGTATTGAGGGACACGTTGATTTGTCCAGATTCATaGCACTTAAGATGGACTTCA +
Preference number: 4 (lower is better)
Translates to: FLGTCFSPKNCTVLRDTLICPDS*HLRWTS
Trigger: TGAAGTCCATCTTAAGTGCCATGAATCTGGACAAAT...CAACGTGTCCCTCAATACCGTGCAATTCTTTGGAGAAAAACAGGTACCCAGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000429629.6
CDS-3UTR CCA 90 bp AAAGAATTGCACGGTATTGAGGGACACGTTGATTGTTTTGGTCAGAAAGGGTCATCATGGCACTTAAGATaGACTTCACAGAAAGAGTTT +
Preference number: 4 (lower is better)
Translates to: KELHGIEGHVDCFGQKGSSWHLR*TSQKEF
Trigger: AAACTCTTTCTGTGAAGTCCATCTTAAGTGCCATGA...TGACCCTTTCTGACCAAAACAATCAACGTGTCCCTCAATACCGTGCAATTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429629.6
CDS GCA 90 bp CTGGAGGCTGGGCAGCTGTCCTTGGGCTCTCGAAGCTGCACCCCCTaGGCCGCAGCGCCGCCCTCTTCTGCCGCAGGAGCGCAGCGGCCA +
Preference number: 5 (lower is better)
Translates to: LEAGQLSLGSRSCTP*AAAPPSSAAGAQRP
Trigger: TGGCCGCTGCGCTCCTGCGGCAGAAGAGGGCGGCGCTGCGGCGCAGGGGGTGCAGCTTCGAGAGCCCAAGGACAGCTGCCCAGCCTCCAG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000446764.5
CDS GCA 90 bp GAGACAGAGCTGGTCCTATCCGGCAGCGATCGCAGTCCCGCAGCCTaGACCCCCGTGCGCGTGGCAGCTTTGCCATCCCTCCGGCCGCCA +
Preference number: 5 (lower is better)
Translates to: ETELVLSGSDRSPAA*TPVRVAALPSLRPP
Trigger: TGGCGGCCGGAGGGATGGCAAAGCTGCCACGCGCACGGGGGTGCAGGCTGCGGGACTGCGATCGCTGCCGGATAGGACCAGCTCTGTCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478702.5
CDS CCA 90 bp TCCGACCTGGAGGCCACCAGCTGCAGCTGCGGCACGACTGCAGTGTaGACCAGGTTCCCGTTCACCACCAGGCGGATCTCCATGGAGTCG +
Preference number: 5 (lower is better)
Translates to: SDLEATSCSCGTTAV*TRFPFTTRRISMES
Trigger: CGACTCCATGGAGATCCGCCTGGTGGTGAACGGGAACCTGGTCCACACTGCAGTCGTGCCGCAGCTGCAGCTGGTGGCCTCCAGGTCGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373387.9
ENST00000435213.6
ENST00000481242.5
ENST00000496711.5
CDS CCA 90 bp TTCACCCTGGAGGCCACCAGCTGCAGCTGCGGCACGACTGCAGTGTaGACCAGGTTCCCGTTCACCACCAGGCGGATCTCCATGGAGTCG +
Preference number: 5 (lower is better)
Translates to: FTLEATSCSCGTTAV*TRFPFTTRRISMES
Trigger: CGACTCCATGGAGATCCGCCTGGTGGTGAACGGGAACCTGGTCCACACTGCAGTCGTGCCGCAGCTGCAGCTGGTGGCCTCCAGGGTGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373386.6
CDS CCA 90 bp CTGGGCAGCTGTCCCCAAACCTCTGCTTCCGCGAGCGTCGTCCCTTaGAGTTCGGCCTCTCCTCGCCTCAGCACCTCCTGGCCCTTTCTA +
Preference number: 5 (lower is better)
Translates to: LGSCPQTSASASVVP*SSASPRLSTSWPFL
Trigger: TAGAAAGGGCCAGGAGGTGCTGAGGCGAGGAGAGGCCGAACTCCAAGGGACGACGCTCGCGGAAGCAGAGGTTTGGGGACAGCTGCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444677.5
CDS GCA 90 bp TGTCTGCTCTGCCAGACTGGGAGCTTCTCCACGGGAGGGGCCGAGTaGTACCAGCTTTGTGGCTGGACCTGCTATCCCCACCAGCTGTGG +
Preference number: 5 (lower is better)
Translates to: CLLCQTGSFSTGGAE*YQLCGWTCYPHQLW
Trigger: CCACAGCTGGTGGGGATAGCAGGTCCAGCCACAAAGCTGGTAGCACTCGGCCCCTCCCGTGGAGAAGCTCCCAGTCTGGCAGAGCAGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481242.5
CDS CCA 90 bp CTCGGCCCGGGGGTGTCTGAGGAGAATTTCGGGCACTGGCCCCCTTaGAGCTGCCTCCAGATGAGACCTCATTCACAGCTGCAGTTGCTG +
Preference number: 5 (lower is better)
Translates to: LGPGVSEENFGHWPP*SCLQMRPHSQLQLL
Trigger: CAGCAACTGCAGCTGTGAATGAGGTCTCATCTGGAGGCAGCTCCAAGGGGGCCAGTGCCCGAAATTCTCCTCAGACACCCCCGGGCCGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000373387.9
ENST00000435213.6
ENST00000481242.5
ENST00000496711.5
ENST00000497703.1
CDS CCA 90 bp CCAGCTTTGTGGCTGGACCTGCTATCCCCACCAGCTGTGGGAACATaGTCTCTGGAGTCAGCCAGCTGGGGTCCAAGTCCTGCCTCTGCC +
Preference number: 5 (lower is better)
Translates to: PALWLDLLSPPAVGT*SLESASWGPSPASA
Trigger: GGCAGAGGCAGGACTTGGACCCCAGCTGGCTGACTCCAGAGACCATGTTCCCACAGCTGGTGGGGATAGCAGGTCCAGCCACAAAGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481242.5
CDS CCA 90 bp GACTGGGAGCTTCTCCACGGGAGGGGCCGAGTGCTACCAGCTTTGTaGCTGGACCTGCTATCCCCACCAGCTGTGGGAACATGGTCTCTG +
Preference number: 5 (lower is better)
Translates to: DWELLHGRGRVLPAL*LDLLSPPAVGTWSL
Trigger: CAGAGACCATGTTCCCACAGCTGGTGGGGATAGCAGGTCCAGCCACAAAGCTGGTAGCACTCGGCCCCTCCCGTGGAGAAGCTCCCAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481242.5
CDS GCA 90 bp GTATATATCCGACCTGGAGGCCACCAGCTGCAGCTGCGGCACGACTaGAGTGTGGACCAGGTTCCCGTTCACCACCAGGCGGATCTCCAT +
Preference number: 5 (lower is better)
Translates to: VYIRPGGHQLQLRHD*SVDQVPVHHQADLH
Trigger: ATGGAGATCCGCCTGGTGGTGAACGGGAACCTGGTCCACACTGCAGTCGTGCCGCAGCTGCAGCTGGTGGCCTCCAGGTCGGATATATAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373387.9
ENST00000435213.6
ENST00000481242.5
ENST00000496711.5
CDS CCA 90 bp CTGGAGTATCTCGGCCCGGGGGTGTCTGAGGAGAATTTCGGGCACTaGCCCCCTTGGAGCTGCCTCCAGATGAGACCTCATTCACAGCTG +
Preference number: 5 (lower is better)
Translates to: LEYLGPGVSEENFGH*PPWSCLQMRPHSQL
Trigger: CAGCTGTGAATGAGGTCTCATCTGGAGGCAGCTCCAAGGGGGCCAGTGCCCGAAATTCTCCTCAGACACCCCCGGGCCGAGATACTCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000373387.9
ENST00000435213.6
ENST00000481242.5
ENST00000496711.5
ENST00000497703.1
CDS CCA 90 bp TCTCAGCTAGAGGCTTTGTGCTGCACCGTGTCTGCTCTGCCAGACTaGGAGCTTCTCCACGGGAGGGGCCGAGTGCTACCAGCTTTGTGG +
Preference number: 5 (lower is better)
Translates to: SQLEALCCTVSALPD*ELLHGRGRVLPALW
Trigger: CCACAAAGCTGGTAGCACTCGGCCCCTCCCGTGGAGAAGCTCCCAGTCTGGCAGAGCAGACACGGTGCAGCACAAAGCCTCTAGCTGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481242.5
CDS GCA 90 bp ATTGAATTTCACCCTGGAGGCCACCAGCTGCAGCTGCGGCACGACTaGAGTGTGGACCAGGTTCCCGTTCACCACCAGGCGGATCTCCAT +
Preference number: 5 (lower is better)
Translates to: IEFHPGGHQLQLRHD*SVDQVPVHHQADLH
Trigger: ATGGAGATCCGCCTGGTGGTGAACGGGAACCTGGTCCACACTGCAGTCGTGCCGCAGCTGCAGCTGGTGGCCTCCAGGGTGAAATTCAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373386.6
CDS GCA 90 bp CTCCCCATGAGATCTAAGGCTCATGACGCAAAGGCCTGTCTGTGCTaGTCACTGCTGGCCCCTCATCATCCAGATCAGGGCCTGGCGGGT +
Preference number: 5 (lower is better)
Translates to: LPMRSKAHDAKACLC*SLLAPHHPDQGLAG
Trigger: ACCCGCCAGGCCCTGATCTGGATGATGAGGGGCCAGCAGTGAGCAGCACAGACAGGCCTTTGCGTCATGAGCCTTAGATCTCATGGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481242.5
CDS CCA 90 bp TGTGGCTGGACCTGCTATCCCCACCAGCTGTGGGAACATGGTCTCTaGAGTCAGCCAGCTGGGGTCCAAGTCCTGCCTCTGCCACTTACT +
Preference number: 5 (lower is better)
Translates to: CGWTCYPHQLWEHGL*SQPAGVQVLPLPLT
Trigger: AGTAAGTGGCAGAGGCAGGACTTGGACCCCAGCTGGCTGACTCCAGAGACCATGTTCCCACAGCTGGTGGGGATAGCAGGTCCAGCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481242.5
CDS CCA 90 bp GAGTGCTACCAGCTTTGTGGCTGGACCTGCTATCCCCACCAGCTGTaGGAACATGGTCTCTGGAGTCAGCCAGCTGGGGTCCAAGTCCTG +
Preference number: 5 (lower is better)
Translates to: ECYQLCGWTCYPHQL*EHGLWSQPAGVQVL
Trigger: CAGGACTTGGACCCCAGCTGGCTGACTCCAGAGACCATGTTCCCACAGCTGGTGGGGATAGCAGGTCCAGCCACAAAGCTGGTAGCACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481242.5
CDS CCA 90 bp ACCAAAAGTTGCAGGAGCTCAGCAGGGAGTGACAGTGAGGACCAGTaGCCAAGAGCTCCAGCACTGGCATTGGACAGACCCGGGGGTTGT +
Preference number: 5 (lower is better)
Translates to: TKSCRSSAGSDSEDQ*PRAPALALDRPGGC
Trigger: ACAACCCCCGGGTCTGTCCAATGCCAGTGCTGGAGCTCTTGGCCACTGGTCCTCACTGTCACTCCCTGCTGAGCTCCTGCAACTTTTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481242.5
CDS-3UTR CAA 90 bp TCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAAGGTGCAGGGGAGCCTCCTaGCAACAGACACAGTCCCCA +
Preference number: 5 (lower is better)
Translates to: SGKMAPDIGEGTGRVCRRCRGAS*QQTQSP
Trigger: TGGGGACTGTGTCTGTTGCAAGGAGGCTCCCCTGCA...CCTTCTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373387.9
CDS-3UTR CAA 90 bp AAAGAAACAAAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGCGGGCACTGGCCCCCTaGGAGCTGCCTCCAGATGAG +
Preference number: 5 (lower is better)
Translates to: KETKVRKDGTGHWRGNWPRALAP*ELPPDE
Trigger: CTCATCTGGAGGCAGCTCCAAGGGGGCCAGTGCCCG...CGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTTTGTTTCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373387.9
ENST00000435213.6
CDS TCA 90 bp CCAGGTTCCCGTTCACCACCAGGCGGATCTCCATGGAGTCGGTGGTaGAGGCCAGGAGATACGGGAAAGCACAGACAATTGCATAGGGAG +
Preference number: 5 (lower is better)
Translates to: PGSRSPPGGSPWSRW*RPGDTGKHRQLHRE
Trigger: CTCCCTATGCAATTGTCTGTGCTTTCCCGTATCTCCTGGCCTTCACCACCGACTCCATGGAGATCCGCCTGGTGGTGAACGGGAACCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
ENST00000481242.5
ENST00000496711.5
CDS GCA 90 bp GACGCCAGCATCAGTGGAAACCAGCAAGGCCTGGCCCCAGGGATCTaGACACACGGCTTCATGAGGGAAATTACTGCAGAAACACTGGGG +
Preference number: 5 (lower is better)
Translates to: DASISGNQQGLAPGI*THGFMREITAETLG
Trigger: CCCCAGTGTTTCTGCAGTAATTTCCCTCATGAAGCCGTGTGTGCAGATCCCTGGGGCCAGGCCTTGCTGGTTTCCACTGATGCTGGCGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CAA 90 bp CCTTCTGACTTGGGTCCACCTTCATCCGAGAGGCCCAGTAGTTCCCTGCGGGTCTTCTTCCGCGCTGACTaGGGTGACTCTGGTAAGACA +
Preference number: 5 (lower is better)
Translates to: PSDLGPPSSERPSSSLRVFFRAD*GDSGKT
Trigger: TGTCTTACCAGAGTCACCCAAGTCAGCGCGGAAGAA...GACCCGCAGGGAACTACTGGGCCTCTCGGATGAAGGTGGACCCAAGTCAGAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373386.6
CDS-3UTR CAA 90 bp AAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGACCGCTTCCGGGGTTTaGATTTGGCCTTTGGCGCTC +
Preference number: 5 (lower is better)
Translates to: KVRKDGTGHWRGNWPSVQTASGV*IWPLAL
Trigger: GAGCGCCAAAGGCCAAATCAAAACCCCGGAAGCGGT...CTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CAA 90 bp AGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAACCGCTTCCGGGGTTTaGATTTGGCCTTTGGCGCTC +
Preference number: 5 (lower is better)
Translates to: RSGKMAPDIGEGTGRVCRTASGV*IWPLAL
Trigger: GAGCGCCAAAGGCCAAATCAAAACCCCGGAAGCGGT...TCTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CAA 90 bp AGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAAGGTTTGGTCGAGTGCCCCTCAGGGTaGGCTTCGGAAGTAGAAGCA +
Preference number: 5 (lower is better)
Translates to: RWHRTLERELAECAEGLVECPSG*ASEVEA
Trigger: TGCTTCTACTTCCGAAGCCAACCCTGAGGGGCACTC...GACCAAACCTTCTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS GCA 90 bp TTTTACTTCACTATCTCAGCTAGAGGCTTTGTGCTGCACCGTGTCTaGTCTGCCAGACTGGGAGCTTCTCCACGGGAGGGGCCGAGTGCT +
Preference number: 5 (lower is better)
Translates to: FYFTISARGFVLHRV*SARLGASPREGPSA
Trigger: AGCACTCGGCCCCTCCCGTGGAGAAGCTCCCAGTCTGGCAGAGCAGACACGGTGCAGCACAAAGCCTCTAGCTGAGATAGTGAAGTAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481242.5
CDS CCA 90 bp CAGCAGGGAGTGACAGTGAGGACCAGTGGCCAAGAGCTCCAGCACTaGCATTGGACAGACCCGGGGGTTGTCAAATCCAAAATAATCCCC +
Preference number: 5 (lower is better)
Translates to: QQGVTVRTSGQELQH*HWTDPGVVKSKIIP
Trigger: GGGGATTATTTTGGATTTGACAACCCCCGGGTCTGTCCAATGCCAGTGCTGGAGCTCTTGGCCACTGGTCCTCACTGTCACTCCCTGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481242.5
CDS-3UTR CAA 90 bp AAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGGGTGGGGTGATGACCTaGGAGACTAAGGGTGACTTC +
Preference number: 5 (lower is better)
Translates to: KVRKDGTGHWRGNWPSVQGGVMT*ETKGDF
Trigger: GAAGTCACCCTTAGTCTCCAAGGTCATCACCCCACC...CTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CAA 90 bp TCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAAGGGGTGGGGTGATGACCTaGGAGACTAAGGGTGACTTC +
Preference number: 5 (lower is better)
Translates to: SGKMAPDIGEGTGRVCRRGGVMT*ETKGDF
Trigger: GAAGTCACCCTTAGTCTCCAAGGTCATCACCCCACC...CCTTCTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CAA 90 bp AACAAAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTAGATGGCACCGGACATaGGAGAGGGAACTGGCCGAG +
Preference number: 5 (lower is better)
Translates to: NKGQERWHRTLERELAECRWHRT*ERELAE
Trigger: CTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCT...ACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTTTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CAA 90 bp AATACCATCTGGTGTGGTATTCTGGGTTCTCTAAGTGCACGTCTGTTCTTCGCCCGCGAGCGTCGTCCCTaGGAGTTCGGCCTCTCCTCG +
Preference number: 5 (lower is better)
Translates to: NTIWCGILGSLSARLFFARERRP*EFGLSS
Trigger: CGAGGAGAGGCCGAACTCCAAGGGACGACGCTCGCG...GGCGAAGAACAGACGTGCACTTAGAGAACCCAGAATACCACACCAGATGGTATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453030.5
CDS GCA 90 bp CTTTTACAAGTTGTGAGCATTTGTGGAGGCCGAGGCCCTCTGTCATaGAGGTGCCATAGGGTCATGTCTGCCCCACCAGCACCCACAATG +
Preference number: 5 (lower is better)
Translates to: LLQVVSICGGRGPLS*RCHRVMSAPPAPTM
Trigger: CATTGTGGGTGCTGGTGGGGCAGACATGACCCTATGGCACCTGCATGACAGAGGGCCTCGGCCTCCACAAATGCTCACAACTTGTAAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481242.5
CDS-3UTR CAA 90 bp TCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAAGGGAATCTTCCAGCCCTTaGGATGGCTCCATCAGCATC +
Preference number: 5 (lower is better)
Translates to: SGKMAPDIGEGTGRVCRRESSSP*DGSISI
Trigger: GATGCTGATGGAGCCATCCAAAGGGCTGGAAGATTC...CCTTCTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CAA 90 bp TCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAAGGTACCAGGCAGGGCAGTaGCATTCTCATCTGAAGAGC +
Preference number: 5 (lower is better)
Translates to: SGKMAPDIGEGTGRVCRRYQAGQ*HSHLKS
Trigger: GCTCTTCAGATGAGAATGCAACTGCCCTGCCTGGTA...CCTTCTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CAA 90 bp AGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAAGGTTTGGTCTACCAGGCAGGGCAGTaGCATTCTCATCTGAAGAGC +
Preference number: 5 (lower is better)
Translates to: RWHRTLERELAECAEGLVYQAGQ*HSHLKS
Trigger: GCTCTTCAGATGAGAATGCAACTGCCCTGCCTGGTA...GACCAAACCTTCTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CAA 90 bp GGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAATTCTTCCGCGCTGACTaGGGTGACTCTGGTAAGACA +
Preference number: 5 (lower is better)
Translates to: GQERWHRTLERELAECAEFFRAD*GDSGKT
Trigger: TGTCTTACCAGAGTCACCCAAGTCAGCGCGGAAGAA...TTCTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CAA 90 bp TTGATCTCCATGCGAGACAGGGACAAGGAGTGCGTGACTGGAATGGCAGCAAGGCTGAAGCTGCCAAGCTaGATGGAGCATCCCCTCTCA +
Preference number: 5 (lower is better)
Translates to: LISMRDRDKECVTGMAARLKLPS*MEHPLS
Trigger: TGAGAGGGGATGCTCCATCAAGCTTGGCAGCTTCAG...CCTTGCTGCCATTCCAGTCACGCACTCCTTGTCCCTGTCTCGCATGGAGATCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373386.6
CDS-3UTR CAA 90 bp CAAAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCGCCACACAGATGAGATaGTCACTCTCTTCAGCTGGC +
Preference number: 5 (lower is better)
Translates to: QRSGKMAPDIGEGTGRVCATQMR*SLSSAG
Trigger: GCCAGCTGAAGAGAGTGACAATCTCATCTGTGTGGC...GCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CAA 90 bp AGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAACAAAATTAACCCTGTaGGCCTCCACGTGGTGCAGC +
Preference number: 5 (lower is better)
Translates to: RSGKMAPDIGEGTGRVCRTKLTL*ASTWCS
Trigger: GCTGCACCACGTGGAGGCCAACAGGGTTAATTTTGT...TCTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CAA 90 bp AGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAAGGTTTGGTCACAAAATTAACCCTGTaGGCCTCCACGTGGTGCAGC +
Preference number: 5 (lower is better)
Translates to: RWHRTLERELAECAEGLVTKLTL*ASTWCS
Trigger: GCTGCACCACGTGGAGGCCAACAGGGTTAATTTTGT...GACCAAACCTTCTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CAA 90 bp TGGTTCCTGAACAGAAAGAAACAAAGGTCAGGAAAGATGGCACCGGACATTGGACGGGCACTGGCCCCCTaGGAGCTGCCTCCAGATGAG +
Preference number: 5 (lower is better)
Translates to: WFLNRKKQRSGKMAPDIGRALAP*ELPPDE
Trigger: CTCATCTGGAGGCAGCTCCAAGGGGGCCAGTGCCCG...TCCAATGTCCGGTGCCATCTTTCCTGACCTTTGTTTCTTTCTGTTCAGGAACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CAA 90 bp AAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGTTCCGGGGTTTTGATTaGGCCTTTGGCGCTCCTTCT +
Preference number: 5 (lower is better)
Translates to: KVRKDGTGHWRGNWPSVQFRGFD*AFGAPS
Trigger: AGAAGGAGCGCCAAAGGCCAAATCAAAACCCCGGAA...CTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CAA 90 bp AGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAAGGTTTGGTCTTCCGGGGTTTTGATTaGGCCTTTGGCGCTCCTTCT +
Preference number: 5 (lower is better)
Translates to: RWHRTLERELAECAEGLVFRGFD*AFGAPS
Trigger: AGAAGGAGCGCCAAAGGCCAAATCAAAACCCCGGAA...GACCAAACCTTCTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CAA 90 bp AAAGAAACAAAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGATGGCACCGGACATaGGAGAGGGAACTGGCCGAG +
Preference number: 5 (lower is better)
Translates to: KETKVRKDGTGHWRGNWPRWHRT*ERELAE
Trigger: CTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCT...CGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTTTGTTTCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS TCA 90 bp CATGAGAACACTGACCCTGCCTGTTGGCCTCCACGTGGTGCAGCCTaGAGGCTTCTCCTGTGCTCTCATTCACCACATCAAATTGGTGTC +
Preference number: 5 (lower is better)
Translates to: HENTDPACWPPRGAA*RLLLCSHSPHQIGV
Trigger: GACACCAATTTGATGTGGTGAATGAGAGCACAGGAGAAGCCTTCAGGCTGCACCACGTGGAGGCCAACAGGCAGGGTCAGTGTTCTCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496711.5
CDS-3UTR CAA 90 bp GGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAAGGTTTGGTCCAATAGATCATGCTATGGAACAGACTaGCAGTGCCCCGGCTCCTCA +
Preference number: 5 (lower is better)
Translates to: GHWRGNWPSVQKVWSNRSCYGTD*QCPGSS
Trigger: TGAGGAGCCGGGGCACTGCAAGTCTGTTCCATAGCA...TGATCTATTGGACCAAACCTTCTGCACACTCGGCCAGTTCCCTCTCCAATGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373387.9
CDS-3UTR CAA 90 bp AGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAAGGTTTGGTCGTGAGCTGCCCATCTTaGGCAAAAAGAACCCCAAAC +
Preference number: 5 (lower is better)
Translates to: RWHRTLERELAECAEGLVVSCPS*AKRTPN
Trigger: GTTTGGGGTTCTTTTTGCCAAAGATGGGCAGCTCAC...GACCAAACCTTCTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CAA 90 bp AAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGGTGACCCCGCTTGGCTaGTTGTGTTTTCTTGTGATC +
Preference number: 5 (lower is better)
Translates to: KVRKDGTGHWRGNWPSVQVTPLG*LCFLVI
Trigger: GATCACAAGAAAACACAACAAGCCAAGCGGGGTCAC...CTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CAA 90 bp ATTTCTTTGATCTCCATGCGAGACAGGGACAAGGAGTGCGTGACTGGAATGGCAGGCGCTCCTTCTGACTaGGGTCCACCTTCATCCGAG +
Preference number: 5 (lower is better)
Translates to: ISLISMRDRDKECVTGMAGAPSD*GPPSSE
Trigger: CTCGGATGAAGGTGGACCCAAGTCAGAAGGAGCGCC...TGCCATTCCAGTCACGCACTCCTTGTCCCTGTCTCGCATGGAGATCAAAGAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373386.6
CDS-3UTR CAA 90 bp CAGAAAGAAACAAAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGGGCGCTCCTTCTGACTaGGGTCCACCTTCATCCGAG +
Preference number: 5 (lower is better)
Translates to: QKETKVRKDGTGHWRGNWGAPSD*GPPSSE
Trigger: CTCGGATGAAGGTGGACCCAAGTCAGAAGGAGCGCC...CCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTTTGTTTCTTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CAA 90 bp CAAAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCGTTTTGATTTGGCCTTaGGCGCTCCTTCTGACTTGG +
Preference number: 5 (lower is better)
Translates to: QRSGKMAPDIGEGTGRVCVLIWP*ALLLTW
Trigger: CCAAGTCAGAAGGAGCGCCAAAGGCCAAATCAAAAC...GCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CAA 90 bp CATTGGAGAGGGAACTGGCCGAGTGTGCAGAAGGTTTGGTCCAATAGATCACTGGAGTGCCCCTCAGGGTaGGCTTCGGAAGTAGAAGCA +
Preference number: 5 (lower is better)
Translates to: HWRGNWPSVQKVWSNRSLECPSG*ASEVEA
Trigger: TGCTTCTACTTCCGAAGCCAACCCTGAGGGGCACTC...CAGTGATCTATTGGACCAAACCTTCTGCACACTCGGCCAGTTCCCTCTCCAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS TCA 90 bp AGGTTGACCTGGGACTCTAGTTCAGGGTCTTTCGTTGGCCATGTCTaGAGGGGCTGGATGCCGAAGGAGAGAGACGACTTTGCTTTCCAT +
Preference number: 5 (lower is better)
Translates to: RLTWDSSSGSFVGHV*RGWMPKERDDFAFH
Trigger: ATGGAAAGCAAAGTCGTCTCTCTCCTTCGGCATCCAGCCCCTTCAGACATGGCCAACGAAAGACCCTGAACTAGAGTCCCAGGTCAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000429629.6
ENST00000439286.5
ENST00000441134.5
ENST00000444677.5
ENST00000446764.5
ENST00000453030.5
CDS GCA 90 bp ACTGATGGAAGGTCATCTGGAAAAGGAAACCTGGTTACCCATCACTaGAACCCAGCCCACGCTTTCCAGAACCCACCAAACGTGCCTGTG +
Preference number: 5 (lower is better)
Translates to: TDGRSSGKGNLVTHH*NPAHAFQNPPNVPV
Trigger: CACAGGCACGTTTGGTGGGTTCTGGAAAGCGTGGGCTGGGTTGCAGTGATGGGTAACCAGGTTTCCTTTTCCAGATGACCTTCCATCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481875.1
CDS CCA 90 bp ATGGATTTCAGTTTTAGTGCCTGCCCTATTCTAACAAACTCCGCCTaGCGGGCCTCCTCTTTCTTCCGCGCTGACTTGGGTGACTCTGGT +
Preference number: 5 (lower is better)
Translates to: MDFSFSACPILTNSA*RASSFFRADLGDSG
Trigger: ACCAGAGTCACCCAAGTCAGCGCGGAAGAAAGAGGAGGCCCGCCAGGCGGAGTTTGTTAGAATAGGGCAGGCACTAAAACTGAAATCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
ENST00000460176.6
CDS CCA 90 bp TGTCAAACACGGGCACTGATGGAAGGTCATCTGGAAAAGGAAACCTaGTTACCCATCACTGCAACCCAGCCCACGCTTTCCAGAACCCAC +
Preference number: 5 (lower is better)
Translates to: CQTRALMEGHLEKET*LPITATQPTLSRTH
Trigger: GTGGGTTCTGGAAAGCGTGGGCTGGGTTGCAGTGATGGGTAACCAGGTTTCCTTTTCCAGATGACCTTCCATCAGTGCCCGTGTTTGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481875.1
CDS-3UTR CAA 90 bp AAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGGACACGTTGATTGTTTaGGTCAGAAAGGGTCACGGA +
Preference number: 5 (lower is better)
Translates to: KVRKDGTGHWRGNWPSVQDTLIV*VRKGHG
Trigger: TCCGTGACCCTTTCTGACCAAAACAATCAACGTGTC...CTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CAA 90 bp CAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAAGGTTCACAGAAAGAGTTTTaGTGGGACTGTAGGGAAGGC +
Preference number: 5 (lower is better)
Translates to: QERWHRTLERELAECAEGSQKEF*WDCREG
Trigger: GCCTTCCCTACAGTCCCACAAAAACTCTTTCTGTGA...ACCTTCTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CAA 90 bp AGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAAGGTTTGGTCTCACAGAAAGAGTTTTaGTGGGACTGTAGGGAAGGC +
Preference number: 5 (lower is better)
Translates to: RWHRTLERELAECAEGLVSQKEF*WDCREG
Trigger: GCCTTCCCTACAGTCCCACAAAAACTCTTTCTGTGA...GACCAAACCTTCTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CAA 90 bp CAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAAGGTGTTTCTGGGCAAATGTaGGGGTTTCCAAAGTGGCTT +
Preference number: 5 (lower is better)
Translates to: QERWHRTLERELAECAEGVSGQM*GFPKWL
Trigger: AAGCCACTTTGGAAACCCCAACATTTGCCCAGAAAC...ACCTTCTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CAA 90 bp AAGAAACAAAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGACTGAAGCTGCCAAGCTaGATGGAGCATCCCCTCTCA +
Preference number: 5 (lower is better)
Translates to: KKQRSGKMAPDIGEGTGRLKLPS*MEHPLS
Trigger: TGAGAGGGGATGCTCCATCAAGCTTGGCAGCTTCAG...TCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTTTGTTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CAA 90 bp AAAGAAACAAAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGCTGAAGCTGCCAAGCTaGATGGAGCATCCCCTCTCA +
Preference number: 5 (lower is better)
Translates to: KETKVRKDGTGHWRGNWPLKLPS*MEHPLS
Trigger: TGAGAGGGGATGCTCCATCAAGCTTGGCAGCTTCAG...CGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTTTGTTTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CAA 90 bp CGAGCATCTTTTCCTTTGTCTGCTCTGAGAACCAGAAGGTCCAGGGTCTCAAGCCTGAAGCTGCCAAGCTaGATGGAGCATCCCCTCTCA +
Preference number: 5 (lower is better)
Translates to: RASFPLSALRTRRSRVSSLKLPS*MEHPLS
Trigger: TGAGAGGGGATGCTCCATCAAGCTTGGCAGCTTCAG...GCTTGAGACCCTGGACCTTCTGGTTCTCAGAGCAGACAAAGGAAAAGATGCTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460176.6
CDS-3UTR CAA 90 bp TCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAAGGCTCAAGCACATGCATTaGCTTCACTGGCAGAGTTCT +
Preference number: 5 (lower is better)
Translates to: SGKMAPDIGEGTGRVCRRLKHMH*LHWQSS
Trigger: AGAACTCTGCCAGTGAAGCAAATGCATGTGCTTGAG...CCTTCTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CAA 90 bp AGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGACGAGCATCTTTTCCTTaGTCTGCTCTGAGAACCAGA +
Preference number: 5 (lower is better)
Translates to: RSGKMAPDIGEGTGRVCRRASFP*SALRTR
Trigger: TCTGGTTCTCAGAGCAGACAAAGGAAAAGATGCTCG...TCTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CAA 90 bp CACCTTCATCCGAGAGGCCCAGTAGTTCCCTGCGGGTCCTGCTTGCTATTTCTTGTGACCCCGCTTGGCTaGTTGTGTTTTCTTGTGATC +
Preference number: 5 (lower is better)
Translates to: HLHPRGPVVPCGSCLLFLVTPLG*LCFLVI
Trigger: GATCACAAGAAAACACAACAAGCCAAGCGGGGTCAC...AAGAAATAGCAAGCAGGACCCGCAGGGAACTACTGGGCCTCTCGGATGAAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373386.6
CDS-3UTR CAA 90 bp AAAGAAACAAAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGGGTGGGGTGATGACCTaGGAGACTAAGGGTGACTTC +
Preference number: 5 (lower is better)
Translates to: KETKVRKDGTGHWRGNWPGGVMT*ETKGDF
Trigger: GAAGTCACCCTTAGTCTCCAAGGTCATCACCCCACC...CGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTTTGTTTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CAA 90 bp AGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGACTGCTTGCTATTTCTTaGATCTCCATGCGAGACAGG +
Preference number: 5 (lower is better)
Translates to: RSGKMAPDIGEGTGRVCRLLAIS*ISMRDR
Trigger: CCTGTCTCGCATGGAGATCAAAGAAATAGCAAGCAG...TCTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CAA 90 bp GGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAACTGCTTGCTATTTCTTaGATCTCCATGCGAGACAGG +
Preference number: 5 (lower is better)
Translates to: GQERWHRTLERELAECAELLAIS*ISMRDR
Trigger: CCTGTCTCGCATGGAGATCAAAGAAATAGCAAGCAG...TTCTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CAA 90 bp AGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAAGGTTGTTTTGATTTGGCCTTaGGCGCTCCTTCTGACTTGG +
Preference number: 5 (lower is better)
Translates to: RKDGTGHWRGNWPSVQKVVLIWP*ALLLTW
Trigger: CCAAGTCAGAAGGAGCGCCAAAGGCCAAATCAAAAC...AACCTTCTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CAA 90 bp CAGAAAGAAACAAAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGACCGCTTCCGGGGTTTaGATTTGGCCTTTGGCGCTC +
Preference number: 5 (lower is better)
Translates to: QKETKVRKDGTGHWRGNWTASGV*IWPLAL
Trigger: GAGCGCCAAAGGCCAAATCAAAACCCCGGAAGCGGT...CCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTTTGTTTCTTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS GCA 90 bp TCTGCTCTGAGAACCAGAAGGTCCAGGGTCTCAAGCACATGCATTTaGTTCACTGGCAGAGTTCTGTCAAACACGGGCACTGATGGAAGG +
Preference number: 5 (lower is better)
Translates to: SALRTRRSRVSSTCI*FTGRVLSNTGTDGR
Trigger: CCTTCCATCAGTGCCCGTGTTTGACAGAACTCTGCCAGTGAAGCAAATGCATGTGCTTGAGACCCTGGACCTTCTGGTTCTCAGAGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
ENST00000460176.6
ENST00000481875.1
CDS GCA 90 bp GTACATGTTAGTTTTACTTCACTATCTCAGCTAGAGGCTTTGTGCTaGACCGTGTCTGCTCTGCCAGACTGGGAGCTTCTCCACGGGAGG +
Preference number: 5 (lower is better)
Translates to: VHVSFTSLSQLEALC*TVSALPDWELLHGR
Trigger: CCTCCCGTGGAGAAGCTCCCAGTCTGGCAGAGCAGACACGGTGCAGCACAAAGCCTCTAGCTGAGATAGTGAAGTAAAACTAACATGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481242.5
CDS GCA 90 bp CCTGTACATGTTAGTTTTACTTCACTATCTCAGCTAGAGGCTTTGTaGTGCACCGTGTCTGCTCTGCCAGACTGGGAGCTTCTCCACGGG +
Preference number: 5 (lower is better)
Translates to: PVHVSFTSLSQLEAL*CTVSALPDWELLHG
Trigger: CCCGTGGAGAAGCTCCCAGTCTGGCAGAGCAGACACGGTGCAGCACAAAGCCTCTAGCTGAGATAGTGAAGTAAAACTAACATGTACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481242.5
CDS CCA 90 bp GGGGCTGGATGCCGAAGGAGAGAGACGACTTTGCTTTCCATAGAATaGTTTGTGCTATCTGACTCCCACAAGGCACCTTCGTTAACGGGT +
Preference number: 5 (lower is better)
Translates to: GAGCRRRETTLLSIE*FVLSDSHKAPSLTG
Trigger: ACCCGTTAACGAAGGTGCCTTGTGGGAGTCAGATAGCACAAACCATTCTATGGAAAGCAAAGTCGTCTCTCTCCTTCGGCATCCAGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000429629.6
ENST00000439286.5
ENST00000441134.5
ENST00000444677.5
ENST00000446764.5
ENST00000453030.5
CDS-3UTR CAA 90 bp GGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAAGGTTTGGTCCAATAGATCAGAATCTTCCAGCCCTTaGGATGGCTCCATCAGCATC +
Preference number: 5 (lower is better)
Translates to: GHWRGNWPSVQKVWSNRSESSSP*DGSISI
Trigger: GATGCTGATGGAGCCATCCAAAGGGCTGGAAGATTC...TGATCTATTGGACCAAACCTTCTGCACACTCGGCCAGTTCCCTCTCCAATGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CAA 90 bp CTGTTCTTCGCCAAGTACCAGGCAGGGCAGTTGCATTCTCATCTGAAGAGCCATTACCAGGCAGGGCAGTaGCATTCTCATCTGAAGAGC +
Preference number: 5 (lower is better)
Translates to: LFFAKYQAGQLHSHLKSHYQAGQ*HSHLKS
Trigger: GCTCTTCAGATGAGAATGCAACTGCCCTGCCTGGTA...ATGGCTCTTCAGATGAGAATGCAACTGCCCTGCCTGGTACTTGGCGAAGAACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441134.5
ENST00000453030.5
CDS-3UTR CAA 90 bp AGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAGGGCCTTTCTCAAATTaGTCCAGATTCATGGCACTT +
Preference number: 5 (lower is better)
Translates to: RSGKMAPDIGEGTGRVCRGPFSN*SRFMAL
Trigger: AAGTGCCATGAATCTGGACAAATTTGAGAAAGGCCC...TCTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CAA 90 bp AAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGATTCACAGAGCCCTCTaGTTCTTCAAGAACCAGCAA +
Preference number: 5 (lower is better)
Translates to: KVRKDGTGHWRGNWPSVQIHRAL*FFKNQQ
Trigger: TTGCTGGTTCTTGAAGAACAAGAGGGCTCTGTGAAT...CTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CAA 90 bp CAAAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCATTCACAGAGCCCTCTaGTTCTTCAAGAACCAGCAA +
Preference number: 5 (lower is better)
Translates to: QRSGKMAPDIGEGTGRVCIHRAL*FFKNQQ
Trigger: TTGCTGGTTCTTGAAGAACAAGAGGGCTCTGTGAAT...GCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CAA 90 bp AACAAAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGTGAGCTGCCCATCTTaGGCAAAAAGAACCCCAAAC +
Preference number: 5 (lower is better)
Translates to: NKGQERWHRTLERELAECVSCPS*AKRTPN
Trigger: GTTTGGGGTTCTTTTTGCCAAAGATGGGCAGCTCAC...ACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTTTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CAA 90 bp CAAAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGATTCCTCTCCTTCTaGGAACACAATGGTGACGAT +
Preference number: 5 (lower is better)
Translates to: QRSGKMAPDIGEGTGRVCRFLSF*EHNGDD
Trigger: ATCGTCACCATTGTGTTCCAAGAAGGAGAGGAATCT...GCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CAA 90 bp GGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAAGGTTTGGTCCAATAGATCAGCCACACAGATGAGATaGTCACTCTCTTCAGCTGGC +
Preference number: 5 (lower is better)
Translates to: GHWRGNWPSVQKVWSNRSATQMR*SLSSAG
Trigger: GCCAGCTGAAGAGAGTGACAATCTCATCTGTGTGGC...TGATCTATTGGACCAAACCTTCTGCACACTCGGCCAGTTCCCTCTCCAATGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CAA 90 bp AAGAAACAAAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGCCACACAGATGAGATaGTCACTCTCTTCAGCTGGC +
Preference number: 5 (lower is better)
Translates to: KKQRSGKMAPDIGEGTGRATQMR*SLSSAG
Trigger: GCCAGCTGAAGAGAGTGACAATCTCATCTGTGTGGC...TCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTTTGTTTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CAA 90 bp CATTGGAGAGGGAACTGGCCGAGTGTGCAGAAGGTTTGGTCCAATAGATCACTGTTCCGGGGTTTTGATTaGGCCTTTGGCGCTCCTTCT +
Preference number: 5 (lower is better)
Translates to: HWRGNWPSVQKVWSNRSLFRGFD*AFGAPS
Trigger: AGAAGGAGCGCCAAAGGCCAAATCAAAACCCCGGAA...CAGTGATCTATTGGACCAAACCTTCTGCACACTCGGCCAGTTCCCTCTCCAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CAA 90 bp ACAAGGGGACTGATGGTTCCTGAACAGAAAGAAACAAAGGTCAGGAAAGATGGCAGATGGCACCGGACATaGGAGAGGGAACTGGCCGAG +
Preference number: 5 (lower is better)
Translates to: TRGLMVPEQKETKVRKDGRWHRT*ERELAE
Trigger: CTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCT...GCCATCTTTCCTGACCTTTGTTTCTTTCTGTTCAGGAACCATCAGTCCCCTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS TCA 90 bp GGTGGCAGGGATAGAATAAACTCATCGGATGGGCAAGTGAGTAAATaGAATCCCAGCTCCATCACTTCAGAGGCATGCGCACTCACGCCA +
Preference number: 5 (lower is better)
Translates to: GGRDRINSSDGQVSK*NPSSITSEACALTP
Trigger: TGGCGTGAGTGCGCATGCCTCTGAAGTGATGGAGCTGGGATTTCATTTACTCACTTGCCCATCCGATGAGTTTATTCTATCCCTGCCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481242.5
CDS GCA 90 bp CCTTTGTCTGCTCTGAGAACCAGAAGGTCCAGGGTCTCAAGCACATaGATTTGCTTCACTGGCAGAGTTCTGTCAAACACGGGCACTGAT +
Preference number: 5 (lower is better)
Translates to: PLSALRTRRSRVSST*ICFTGRVLSNTGTD
Trigger: ATCAGTGCCCGTGTTTGACAGAACTCTGCCAGTGAAGCAAATGCATGTGCTTGAGACCCTGGACCTTCTGGTTCTCAGAGCAGACAAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
ENST00000460176.6
ENST00000481875.1
CDS GCA 90 bp TCACTTCCTCACTTGTATTCTCAACCCTTAGAGCCTGGCCTCCTGTaGTTCCAGGAAAACCACCCTTTGAGCTCAGCCAAGATCTCCTTC +
Preference number: 5 (lower is better)
Translates to: SLPHLYSQPLEPGLL*FQENHPLSSAKISF
Trigger: GAAGGAGATCTTGGCTGAGCTCAAAGGGTGGTTTTCCTGGAAGCACAGGAGGCCAGGCTCTAAGGGTTGAGAATACAAGTGAGGAAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481242.5
CDS CCA 90 bp TCCCTTGACTGGTACACGCCACAGCCAACATCTGAACTAATGTTCTaGTTCTCTTTCAACCTTACCGCTCTCGTACCTCCAGCGAGGCAT +
Preference number: 5 (lower is better)
Translates to: SLDWYTPQPTSELMF*FSFNLTALVPPARH
Trigger: ATGCCTCGCTGGAGGTACGAGAGCGGTAAGGTTGAAAGAGAACCAGAACATTAGTTCAGATGTTGGCTGTGGCGTGTACCAGTCAAGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481242.5
CDS-3UTR CAA 90 bp AGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAGTATTGAGGGACACGTaGATTGTTTTGGTCAGAAAG +
Preference number: 5 (lower is better)
Translates to: RSGKMAPDIGEGTGRVCRVLRDT*IVLVRK
Trigger: CTTTCTGACCAAAACAATCAACGTGTCCCTCAATAC...TCTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CAA 90 bp AAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGGTATTGAGGGACACGTaGATTGTTTTGGTCAGAAAG +
Preference number: 5 (lower is better)
Translates to: KVRKDGTGHWRGNWPSVQVLRDT*IVLVRK
Trigger: CTTTCTGACCAAAACAATCAACGTGTCCCTCAATAC...CTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CAA 90 bp TTTGGCGCTCCTTCTGACTTGGGTCCACCTTCATCCGAGAGGCCCAGTAGTTCCAAGAATTGCACGGTATaGAGGGACACGTTGATTGTT +
Preference number: 5 (lower is better)
Translates to: FGAPSDLGPPSSERPSSSKNCTV*RDTLIV
Trigger: AACAATCAACGTGTCCCTCAATACCGTGCAATTCTT...GGAACTACTGGGCCTCTCGGATGAAGGTGGACCCAAGTCAGAAGGAGCGCCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373386.6
CDS-3UTR CAA 90 bp GGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAAAAGAATTGCACGGTATaGAGGGACACGTTGATTGTT +
Preference number: 5 (lower is better)
Translates to: GQERWHRTLERELAECAEKNCTV*RDTLIV
Trigger: AACAATCAACGTGTCCCTCAATACCGTGCAATTCTT...TTCTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CAA 90 bp TCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAAGGAAGAATTGCACGGTATaGAGGGACACGTTGATTGTT +
Preference number: 5 (lower is better)
Translates to: SGKMAPDIGEGTGRVCRRKNCTV*RDTLIV
Trigger: AACAATCAACGTGTCCCTCAATACCGTGCAATTCTT...CCTTCTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CAA 90 bp CAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAAGGTTTTTTCTCCAAAGAATaGCACGGTATTGAGGGACAC +
Preference number: 5 (lower is better)
Translates to: QERWHRTLERELAECAEGFFSKE*HGIEGH
Trigger: GTGTCCCTCAATACCGTGCAATTCTTTGGAGAAAAA...ACCTTCTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CAA 90 bp GGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAATTTTTCTCCAAAGAATaGCACGGTATTGAGGGACAC +
Preference number: 5 (lower is better)
Translates to: GQERWHRTLERELAECAEFFSKE*HGIEGH
Trigger: GTGTCCCTCAATACCGTGCAATTCTTTGGAGAAAAA...TTCTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CAA 90 bp TCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAAGGTTTTTCTCCAAAGAATaGCACGGTATTGAGGGACAC +
Preference number: 5 (lower is better)
Translates to: SGKMAPDIGEGTGRVCRRFFSKE*HGIEGH
Trigger: GTGTCCCTCAATACCGTGCAATTCTTTGGAGAAAAA...CCTTCTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CAA 90 bp CAAAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAAAAGAACCCCAAACTaGAAATTCACAGAGCCCTCT +
Preference number: 5 (lower is better)
Translates to: QRSGKMAPDIGEGTGRVCKRTPN*KFTEPS
Trigger: AGAGGGCTCTGTGAATTTCAAGTTTGGGGTTCTTTT...GCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CAA 90 bp AAGAAACAAAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGAGCTGCCCATCTTaGGCAAAAAGAACCCCAAAC +
Preference number: 5 (lower is better)
Translates to: KKQRSGKMAPDIGEGTGRVSCPS*AKRTPN
Trigger: GTTTGGGGTTCTTTTTGCCAAAGATGGGCAGCTCAC...TCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTTTGTTTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CAA 90 bp CAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAAGGTTGCTGTTTGTTCTCTTaGGAATATGGCAACATGGTG +
Preference number: 5 (lower is better)
Translates to: QERWHRTLERELAECAEGCCLFS*EYGNMV
Trigger: CACCATGTTGCCATATTCCAAAGAGAACAAACAGCA...ACCTTCTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CAA 90 bp GGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAAACAGGTGGCAGCCTTTaGTTTTCTCCAACTTGTTTT +
Preference number: 5 (lower is better)
Translates to: GQERWHRTLERELAECAETGGSL*FSPTCF
Trigger: AAAACAAGTTGGAGAAAACAAAAGGCTGCCACCTGT...TTCTGCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CAA 90 bp AAAGAAACAAAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGGTGACCCCGCTTGGCTaGTTGTGTTTTCTTGTGATC +
Preference number: 5 (lower is better)
Translates to: KETKVRKDGTGHWRGNWPVTPLG*LCFLVI
Trigger: GATCACAAGAAAACACAACAAGCCAAGCGGGGTCAC...CGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTTTGTTTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CAA 90 bp CGAGCATCTTTTCCTTTGTCTGCTCTGAGAACCAGAAGGTCCAGGGTCTCAAGCGTGACCCCGCTTGGCTaGTTGTGTTTTCTTGTGATC +
Preference number: 5 (lower is better)
Translates to: RASFPLSALRTRRSRVSSVTPLG*LCFLVI
Trigger: GATCACAAGAAAACACAACAAGCCAAGCGGGGTCAC...GCTTGAGACCCTGGACCTTCTGGTTCTCAGAGCAGACAAAGGAAAAGATGCTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000460176.6
CDS-3UTR CAA 90 bp CAAAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCATTCACCACATCAAATaGGTGTCGATAAGCCACACA +
Preference number: 5 (lower is better)
Translates to: QRSGKMAPDIGEGTGRVCIHHIK*VSISHT
Trigger: TGTGTGGCTTATCGACACCAATTTGATGTGGTGAAT...GCACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CAA 90 bp CAGAAAGAAACAAAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGGGAAAGCACAGACAATaGCATAGGGAGCCTGGTTCC +
Preference number: 5 (lower is better)
Translates to: QKETKVRKDGTGHWRGNWGKHRQ*HREPGS
Trigger: GGAACCAGGCTCCCTATGCAATTGTCTGTGCTTTCC...CCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTTTGTTTCTTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CAA 90 bp AGAAAGGGTCACGGACAAGAAGAAAGGGCTCTTCTCGGCATCGTTTCCAATGTAGTTCAGGGTCTTTCGTaGGCCATGTCTGAAGGGGCT +
Preference number: 5 (lower is better)
Translates to: RKGHGQEERALLGIVSNVVQGLS*AMSEGA
Trigger: AGCCCCTTCAGACATGGCCAACGAAAGACCCTGAAC...TACATTGGAAACGATGCCGAGAAGAGCCCTTTCTTCTTGTCCGTGACCCTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429629.6
ENST00000441134.5
ENST00000453030.5
CDS-3UTR CAA 90 bp GAATTGCACGGTATTGAGGGACACGTTGATTGTTTTGGTCAGAAAGGGTCACGGGTTCAGGGTCTTTCGTaGGCCATGTCTGAAGGGGCT +
Preference number: 5 (lower is better)
Translates to: ELHGIEGHVDCFGQKGSRVQGLS*AMSEGA
Trigger: AGCCCCTTCAGACATGGCCAACGAAAGACCCTGAAC...CCGTGACCCTTTCTGACCAAAACAATCAACGTGTCCCTCAATACCGTGCAATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000429629.6
ENST00000441134.5
ENST00000453030.5
CDS-3UTR CAA 90 bp CTGTTTTTCTCCAAAGAATTGCACGGTATTGAGGGACACGTTGATTGTTTTGGTGCTGGGCAGCTGTCCTaGGGCTCTCGAAGCTGCACC +
Preference number: 5 (lower is better)
Translates to: LFFSKELHGIEGHVDCFGAGQLS*GSRSCT
Trigger: GGTGCAGCTTCGAGAGCCCAAGGACAGCTGCCCAGC...ACCAAAACAATCAACGTGTCCCTCAATACCGTGCAATTCTTTGGAGAAAAACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441134.5
CDS TCA 90 bp AAGGAGAGAGACGACTTTGCTTTCCATAGAATGGTTTGTGCTATCTaGCTCCCACAAGGCACCTTCGTTAACGGGTCCATCAGTGGGCCT +
Preference number: 5 (lower is better)
Translates to: KERDDFAFHRMVCAI*LPQGTFVNGSISGP
Trigger: AGGCCCACTGATGGACCCGTTAACGAAGGTGCCTTGTGGGAGTCAGATAGCACAAACCATTCTATGGAAAGCAAAGTCGTCTCTCTCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000429629.6
ENST00000439286.5
ENST00000441134.5
ENST00000444677.5
ENST00000446764.5
ENST00000453030.5
CDS GCA 90 bp ACTCTAGTTCAGGGTCTTTCGTTGGCCATGTCTGAAGGGGCTGGATaGCGAAGGAGAGAGACGACTTTGCTTTCCATAGAATGGTTTGTG +
Preference number: 5 (lower is better)
Translates to: TLVQGLSLAMSEGAG*RRRETTLLSIEWFV
Trigger: CACAAACCATTCTATGGAAAGCAAAGTCGTCTCTCTCCTTCGGCATCCAGCCCCTTCAGACATGGCCAACGAAAGACCCTGAACTAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000429629.6
ENST00000439286.5
ENST00000441134.5
ENST00000444677.5
ENST00000446764.5
ENST00000453030.5
CDS-3UTR CAA 90 bp CATTGGAGAGGGAACTGGCCGAGTGTGCAGAAGGTTTGGTCCAATAGATCACTGGACACGTTGATTGTTTaGGTCAGAAAGGGTCACGGA +
Preference number: 5 (lower is better)
Translates to: HWRGNWPSVQKVWSNRSLDTLIV*VRKGHG
Trigger: TCCGTGACCCTTTCTGACCAAAACAATCAACGTGTC...CAGTGATCTATTGGACCAAACCTTCTGCACACTCGGCCAGTTCCCTCTCCAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CAA 90 bp CTTTCTTCTAACCGCTTCCGGGGTTTTGATTTGGCCTTTGGCGCTCCTTCTGACTCACAGAAAGAGTTTTaGTGGGACTGTAGGGAAGGC +
Preference number: 5 (lower is better)
Translates to: LSSNRFRGFDLAFGAPSDSQKEF*WDCREG
Trigger: GCCTTCCCTACAGTCCCACAAAAACTCTTTCTGTGA...GTCAGAAGGAGCGCCAAAGGCCAAATCAAAACCCCGGAAGCGGTTAGAAGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373386.6
CDS-3UTR CAA 90 bp AAAGAAACAAAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGGTTTCTGGGCAAATGTaGGGGTTTCCAAAGTGGCTT +
Preference number: 5 (lower is better)
Translates to: KETKVRKDGTGHWRGNWPVSGQM*GFPKWL
Trigger: AAGCCACTTTGGAAACCCCAACATTTGCCCAGAAAC...CGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTTTGTTTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CAA 90 bp GGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAAGGTTTGGTCCAATAGATCAGTTTCTGGGCAAATGTaGGGGTTTCCAAAGTGGCTT +
Preference number: 5 (lower is better)
Translates to: GHWRGNWPSVQKVWSNRSVSGQM*GFPKWL
Trigger: AAGCCACTTTGGAAACCCCAACATTTGCCCAGAAAC...TGATCTATTGGACCAAACCTTCTGCACACTCGGCCAGTTCCCTCTCCAATGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CAA 90 bp CATTGGAGAGGGAACTGGCCGAGTGTGCAGAAGGTTTGGTCCAATAGATCACTGCGAGCATCTTTTCCTTaGTCTGCTCTGAGAACCAGA +
Preference number: 5 (lower is better)
Translates to: HWRGNWPSVQKVWSNRSLRASFP*SALRTR
Trigger: TCTGGTTCTCAGAGCAGACAAAGGAAAAGATGCTCG...CAGTGATCTATTGGACCAAACCTTCTGCACACTCGGCCAGTTCCCTCTCCAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CAA 90 bp GCGAGCATCTTTTCCTTTGTCTGCTCTGAGAACCAGAAGGTCCAGGGTCTCAAGCGAGCATCTTTTCCTTaGTCTGCTCTGAGAACCAGA +
Preference number: 5 (lower is better)
Translates to: ASIFSFVCSENQKVQGLKRASFP*SALRTR
Trigger: TCTGGTTCTCAGAGCAGACAAAGGAAAAGATGCTCG...CTTGAGACCCTGGACCTTCTGGTTCTCAGAGCAGACAAAGGAAAAGATGCTCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460176.6
CDS-3UTR CAA 90 bp AACAAAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGTGTGCAGTTTATTCCGAATaGCAACCACAATCCTCAGCT +
Preference number: 5 (lower is better)
Translates to: NKGQERWHRTLERELAECAVYSE*QPQSSA
Trigger: AGCTGAGGATTGTGGTTGCAATTCGGAATAAACTGC...ACACTCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTTTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CAA 90 bp TGCTTCCCCTCAAGGCCCTTTTGCAGAGCACTTAGCCTGAAGACAAAGAGGCGAGCAGTTTATTCCGAATaGCAACCACAATCCTCAGCT +
Preference number: 5 (lower is better)
Translates to: CFPSRPFCRALSLKTKRRAVYSE*QPQSSA
Trigger: AGCTGAGGATTGTGGTTGCAATTCGGAATAAACTGC...TCGCCTCTTTGTCTTCAGGCTAAGTGCTCTGCAAAAGGGCCTTGAGGGGAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460176.6
CDS-3UTR CAA 90 bp TACTTCAAGTCTATAATGTCTTCATCGGAGAAAGCCGTGAGCTGGAAGGGGCTGACAAAATTAACCCTGTaGGCCTCCACGTGGTGCAGC +
Preference number: 5 (lower is better)
Translates to: YFKSIMSSSEKAVSWKGLTKLTL*ASTWCS
Trigger: GCTGCACCACGTGGAGGCCAACAGGGTTAATTTTGT...CAGCCCCTTCCAGCTCACGGCTTTCTCCGATGAAGACATTATAGACTTGAAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373386.6
CDS-3UTR CAA 90 bp TTGAGGGACACGTTGATTGTTTTGGTCAGAAAGGGTCACGGACAAGAAGAAAGGGTTCAGGGTCTTTCGTaGGCCATGTCTGAAGGGGCT +
Preference number: 5 (lower is better)
Translates to: LRDTLIVLVRKGHGQEERVQGLS*AMSEGA
Trigger: AGCCCCTTCAGACATGGCCAACGAAAGACCCTGAAC...CCTTTCTTCTTGTCCGTGACCCTTTCTGACCAAAACAATCAACGTGTCCCTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000429629.6
ENST00000441134.5
ENST00000453030.5
CDS TCA 90 bp CACATGCATTTGCTTCACTGGCAGAGTTCTGTCAAACACGGGCACTaGTGGAAGGTCATCTGGAAAAGGAAACCTGGTTACCCATCACTG +
Preference number: 5 (lower is better)
Translates to: HMHLLHWQSSVKHGH*WKVIWKRKPGYPSL
Trigger: CAGTGATGGGTAACCAGGTTTCCTTTTCCAGATGACCTTCCATCAGTGCCCGTGTTTGACAGAACTCTGCCAGTGAAGCAAATGCATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481875.1
CDS-3UTR CAA 90 bp AAGAAACAAAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAGGGCCTTTCTCAAATTaGTCCAGATTCATGGCACTT +
Preference number: 5 (lower is better)
Translates to: KKQRSGKMAPDIGEGTGRGPFSN*SRFMAL
Trigger: AAGTGCCATGAATCTGGACAAATTTGAGAAAGGCCC...TCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTTTGTTTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CAA 90 bp GGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAAGGTTTGGTCCAATAGATCAATTCACAGAGCCCTCTaGTTCTTCAAGAACCAGCAA +
Preference number: 5 (lower is better)
Translates to: GHWRGNWPSVQKVWSNRSIHRAL*FFKNQQ
Trigger: TTGCTGGTTCTTGAAGAACAAGAGGGCTCTGTGAAT...TGATCTATTGGACCAAACCTTCTGCACACTCGGCCAGTTCCCTCTCCAATGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CAA 90 bp TGGTTCCTGAACAGAAAGAAACAAAGGTCAGGAAAGATGGCACCGGACATTGGACCTGTGGTATCATTTTaGGTATCCAGACCGCCACGG +
Preference number: 5 (lower is better)
Translates to: WFLNRKKQRSGKMAPDIGPVVSF*VSRPPR
Trigger: CCGTGGCGGTCTGGATACCAAAAATGATACCACAGG...TCCAATGTCCGGTGCCATCTTTCCTGACCTTTGTTTCTTTCTGTTCAGGAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CAA 90 bp CAGCTCTCTGCTGTGGTGAGTGTTAATAGCATACAGGTGGCAGCCTTTTGTTTTTTCTTCCGCGCTGACTaGGGTGACTCTGGTAAGACA +
Preference number: 5 (lower is better)
Translates to: QLSAVVSVNSIQVAAFCFFFRAD*GDSGKT
Trigger: TGTCTTACCAGAGTCACCCAAGTCAGCGCGGAAGAA...AAAACAAAAGGCTGCCACCTGTATGCTATTAACACTCACCACAGCAGAGAGCTG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000460176.6
CDS-3UTR CAA 90 bp CCCTCAAGGCCCTTTTGCAGAGCACTTAGCCTGAAGACAAAGAGGCGAGCATCTACAGGTGGCAGCCTTTaGTTTTCTCCAACTTGTTTT +
Preference number: 5 (lower is better)
Translates to: PSRPFCRALSLKTKRRASTGGSL*FSPTCF
Trigger: AAAACAAGTTGGAGAAAACAAAAGGCTGCCACCTGT...AGATGCTCGCCTCTTTGTCTTCAGGCTAAGTGCTCTGCAAAAGGGCCTTGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460176.6
CDS-3UTR CAA 90 bp GGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAAGGTTTGGTCCAATAGATCAGCAGTTTATTCCGAATaGCAACCACAATCCTCAGCT +
Preference number: 5 (lower is better)
Translates to: GHWRGNWPSVQKVWSNRSAVYSE*QPQSSA
Trigger: AGCTGAGGATTGTGGTTGCAATTCGGAATAAACTGC...TGATCTATTGGACCAAACCTTCTGCACACTCGGCCAGTTCCCTCTCCAATGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CAA 90 bp ACCTCAATGAAATCTACCACCTTTATTACAAGGGGACTGATGGTTCCTGAACAGGAGTGCCCCTCAGGGTaGGCTTCGGAAGTAGAAGCA +
Preference number: 5 (lower is better)
Translates to: TSMKSTTFITRGLMVPEQECPSG*ASEVEA
Trigger: TGCTTCTACTTCCGAAGCCAACCCTGAGGGGCACTC...CTGTTCAGGAACCATCAGTCCCCTTGTAATAAAGGTGGTAGATTTCATTGAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CAA 90 bp CTGGGTACCTGTTTTTCTCCAAAGAATTGCACGGTATTGAGGGACACGTTGATTTACCAGGCAGGGCAGTaGCATTCTCATCTGAAGAGC +
Preference number: 5 (lower is better)
Translates to: LGTCFSPKNCTVLRDTLIYQAGQ*HSHLKS
Trigger: GCTCTTCAGATGAGAATGCAACTGCCCTGCCTGGTA...AATCAACGTGTCCCTCAATACCGTGCAATTCTTTGGAGAAAAACAGGTACCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000429629.6
ENST00000441134.5
CDS-3UTR CAA 90 bp ACAAGAAGAAAGGGCTCTTCTCGGCATCGTTTCCAATGTAGTTCTGATGGACTTTACCAGGCAGGGCAGTaGCATTCTCATCTGAAGAGC +
Preference number: 5 (lower is better)
Translates to: TRRKGSSRHRFQCSSDGLYQAGQ*HSHLKS
Trigger: GCTCTTCAGATGAGAATGCAACTGCCCTGCCTGGTA...AAGTCCATCAGAACTACATTGGAAACGATGCCGAGAAGAGCCCTTTCTTCTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429629.6
ENST00000441134.5
ENST00000453030.5
CDS-3UTR CAA 90 bp CCTTTGGATGGCTCCATCAGCATCACTGGAAATAAGCAGCTCCACAGATCCATATCACAGAAAGAGTTTTaGTGGGACTGTAGGGAAGGC +
Preference number: 5 (lower is better)
Translates to: PLDGSISITGNKQLHRSISQKEF*WDCREG
Trigger: GCCTTCCCTACAGTCCCACAAAAACTCTTTCTGTGA...TATGGATCTGTGGAGCTGCTTATTTCCAGTGATGCTGATGGAGCCATCCAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441134.5
CDS-3UTR CAA 90 bp TGGAGAGGGAACTGGCCGAGTGTGCAGAAGGTTTGGTCCAATAGATCACTGACAAAAAGAACCCCAAACTaGAAATTCACAGAGCCCTCT +
Preference number: 5 (lower is better)
Translates to: WRGNWPSVQKVWSNRSLTKRTPN*KFTEPS
Trigger: AGAGGGCTCTGTGAATTTCAAGTTTGGGGTTCTTTT...TGTCAGTGATCTATTGGACCAAACCTTCTGCACACTCGGCCAGTTCCCTCTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CAA 90 bp AAGAAACAAAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGCCGAAAAAGAACCCCAAACTaGAAATTCACAGAGCCCTCT +
Preference number: 5 (lower is better)
Translates to: KKQRSGKMAPDIGEGTGRKRTPN*KFTEPS
Trigger: AGAGGGCTCTGTGAATTTCAAGTTTGGGGTTCTTTT...TCGGCCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTTTGTTTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CAA 90 bp CAGAAAGAAACAAAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGAGATTCCTCTCCTTCTaGGAACACAATGGTGACGAT +
Preference number: 5 (lower is better)
Translates to: QKETKVRKDGTGHWRGNWRFLSF*EHNGDD
Trigger: ATCGTCACCATTGTGTTCCAAGAAGGAGAGGAATCT...CCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTTTGTTTCTTTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CAA 90 bp AGAGCACTTAGCCTGAAGACAAAGAGGCGAGCATCTTTTCCTTTGTCTGCTCTGCTCAAGCACATGCATTaGCTTCACTGGCAGAGTTCT +
Preference number: 5 (lower is better)
Translates to: RALSLKTKRRASFPLSALLKHMH*LHWQSS
Trigger: AGAACTCTGCCAGTGAAGCAAATGCATGTGCTTGAG...CAGAGCAGACAAAGGAAAAGATGCTCGCCTCTTTGTCTTCAGGCTAAGTGCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460176.6
CDS TCA 90 bp TGCTCTCATTCACCACATCAAATTGGTGTCGATAAGCCACACAGATaGGATTGTCACTCTCTTCAGCTGGCCCATCCACTAAGGTCATCA +
Preference number: 5 (lower is better)
Translates to: CSHSPHQIGVDKPHR*DCHSLQLAHPLRSS
Trigger: TGATGACCTTAGTGGATGGGCCAGCTGAAGAGAGTGACAATCTCATCTGTGTGGCTTATCGACACCAATTTGATGTGGTGAATGAGAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
ENST00000478696.5
ENST00000496711.5
CDS GCA 90 bp CCACGTCTACAGCCTAGGTCTTCCGAGACAGAGCTGGAACAAAAATaGTTCATCAGTATTATACATAGCGATCTGGCCACAAACCTTCTG +
Preference number: 5 (lower is better)
Translates to: PRLQPRSSETELEQK*FISIIHSDLATNLL
Trigger: CAGAAGGTTTGTGGCCAGATCGCTATGTATAATACTGATGAAGCATTTTTGTTCCAGCTCTGTCTCGGAAGACCTAGGCTGTAGACGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373387.9
CDS CCA 90 bp AAGATGAAAGTGAGGCTCAGGGTGAAGTCACTTAAGTCCCTTGACTaGTACACGCCACAGCCAACATCTGAACTAATGTTCTGGTTCTCT +
Preference number: 5 (lower is better)
Translates to: KMKVRLRVKSLKSLD*YTPQPTSELMFWFS
Trigger: AGAGAACCAGAACATTAGTTCAGATGTTGGCTGTGGCGTGTACCAGTCAAGGGACTTAAGTGACTTCACCCTGAGCCTCACTTTCATCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481242.5
CDS-3UTR CAA 90 bp CACGTTGATTGTTTTGGTCAGAAAGGGTCACGGACAAGAAGAAAGGGCTCTTCTGACACGTTGATTGTTTaGGTCAGAAAGGGTCACGGA +
Preference number: 5 (lower is better)
Translates to: HVDCFGQKGSRTRRKGSSDTLIV*VRKGHG
Trigger: TCCGTGACCCTTTCTGACCAAAACAATCAACGTGTC...AGAAGAGCCCTTTCTTCTTGTCCGTGACCCTTTCTGACCAAAACAATCAACGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429629.6
ENST00000441134.5
ENST00000453030.5
CDS-3UTR CAA 90 bp ACAAGGGGACTGATGGTTCCTGAACAGAAAGAAACAAAGGTCAGGAAAGATGGCGACACGTTGATTGTTTaGGTCAGAAAGGGTCACGGA +
Preference number: 5 (lower is better)
Translates to: TRGLMVPEQKETKVRKDGDTLIV*VRKGHG
Trigger: TCCGTGACCCTTTCTGACCAAAACAATCAACGTGTC...GCCATCTTTCCTGACCTTTGTTTCTTTCTGTTCAGGAACCATCAGTCCCCTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CAA 90 bp GACACGTTGATTGTTTTGGTCAGAAAGGGTCACGGACAAGAAGAAAGGGCTCTTGACACGTTGATTGTTTaGGTCAGAAAGGGTCACGGA +
Preference number: 5 (lower is better)
Translates to: DTLIVLVRKGHGQEERALDTLIV*VRKGHG
Trigger: TCCGTGACCCTTTCTGACCAAAACAATCAACGTGTC...AAGAGCCCTTTCTTCTTGTCCGTGACCCTTTCTGACCAAAACAATCAACGTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429629.6
ENST00000441134.5
ENST00000453030.5
CDS-3UTR CAA 90 bp TTTGGTCAGAAAGGGTCACGGACAAGAAGAAAGGGCTCTTCTCGGCATCGTTTCAAGAATTGCACGGTATaGAGGGACACGTTGATTGTT +
Preference number: 5 (lower is better)
Translates to: FGQKGSRTRRKGSSRHRFKNCTV*RDTLIV
Trigger: AACAATCAACGTGTCCCTCAATACCGTGCAATTCTT...GAAACGATGCCGAGAAGAGCCCTTTCTTCTTGTCCGTGACCCTTTCTGACCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429629.6
ENST00000441134.5
ENST00000453030.5
CDS-3UTR CAA 90 bp GGACATTGGAGAGGGAACTGGCCGAGTGTGCAGAAGGTTTGGTCCAATAGATCATCGCTTCCAATTTCATaGCTGAACATCTCATCATCA +
Preference number: 5 (lower is better)
Translates to: GHWRGNWPSVQKVWSNRSSLPIS*LNISSS
Trigger: TGATGATGAGATGTTCAGCAATGAAATTGGAAGCGA...TGATCTATTGGACCAAACCTTCTGCACACTCGGCCAGTTCCCTCTCCAATGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CAA 90 bp TGGAGAGGGAACTGGCCGAGTGTGCAGAAGGTTTGGTCCAATAGATCACTGACATCGCTTCCAATTTCATaGCTGAACATCTCATCATCA +
Preference number: 5 (lower is better)
Translates to: WRGNWPSVQKVWSNRSLTSLPIS*LNISSS
Trigger: TGATGATGAGATGTTCAGCAATGAAATTGGAAGCGA...TGTCAGTGATCTATTGGACCAAACCTTCTGCACACTCGGCCAGTTCCCTCTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CAA 90 bp ACCTTTATTACAAGGGGACTGATGGTTCCTGAACAGAAAGAAACAAAGGTCAGGCCTGTGGTATCATTTTaGGTATCCAGACCGCCACGG +
Preference number: 5 (lower is better)
Translates to: TFITRGLMVPEQKETKVRPVVSF*VSRPPR
Trigger: CCGTGGCGGTCTGGATACCAAAAATGATACCACAGG...CCTGACCTTTGTTTCTTTCTGTTCAGGAACCATCAGTCCCCTTGTAATAAAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CAA 90 bp ACCTTTATTACAAGGGGACTGATGGTTCCTGAACAGAAAGAAACAAAGGTCAGGTTCTTCCGCGCTGACTaGGGTGACTCTGGTAAGACA +
Preference number: 5 (lower is better)
Translates to: TFITRGLMVPEQKETKVRFFRAD*GDSGKT
Trigger: TGTCTTACCAGAGTCACCCAAGTCAGCGCGGAAGAA...CCTGACCTTTGTTTCTTTCTGTTCAGGAACCATCAGTCCCCTTGTAATAAAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CAA 90 bp ACAAGGGGACTGATGGTTCCTGAACAGAAAGAAACAAAGGTCAGGAAAGATGGCCTCAAGCACATGCATTaGCTTCACTGGCAGAGTTCT +
Preference number: 5 (lower is better)
Translates to: TRGLMVPEQKETKVRKDGLKHMH*LHWQSS
Trigger: AGAACTCTGCCAGTGAAGCAAATGCATGTGCTTGAG...GCCATCTTTCCTGACCTTTGTTTCTTTCTGTTCAGGAACCATCAGTCCCCTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CAA 90 bp ATTTCTTTGATCTCCATGCGAGACAGGGACAAGGAGTGCGTGACTGGAATGGCAACAGGTGGCAGCCTTTaGTTTTCTCCAACTTGTTTT +
Preference number: 5 (lower is better)
Translates to: ISLISMRDRDKECVTGMATGGSL*FSPTCF
Trigger: AAAACAAGTTGGAGAAAACAAAAGGCTGCCACCTGT...TGCCATTCCAGTCACGCACTCCTTGTCCCTGTCTCGCATGGAGATCAAAGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373386.6
CDS-3UTR CAA 90 bp CAGAAAGAAACAAAGGTCAGGAAAGATGGCACCGGACATTGGAGAGGGAACTGGACAGGTGGCAGCCTTTaGTTTTCTCCAACTTGTTTT +
Preference number: 5 (lower is better)
Translates to: QKETKVRKDGTGHWRGNWTGGSL*FSPTCF
Trigger: AAAACAAGTTGGAGAAAACAAAAGGCTGCCACCTGT...CCAGTTCCCTCTCCAATGTCCGGTGCCATCTTTCCTGACCTTTGTTTCTTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CAA 90 bp ACCACCTTTATTACAAGGGGACTGATGGTTCCTGAACAGAAAGAAACAAAGGTCGGAAAGCACAGACAATaGCATAGGGAGCCTGGTTCC +
Preference number: 5 (lower is better)
Translates to: TTFITRGLMVPEQKETKVGKHRQ*HREPGS
Trigger: GGAACCAGGCTCCCTATGCAATTGTCTGTGCTTTCC...GACCTTTGTTTCTTTCTGTTCAGGAACCATCAGTCCCCTTGTAATAAAGGTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CAA 90 bp ACCTTTATTACAAGGGGACTGATGGTTCCTGAACAGAAAGAAACAAAGGTCAGGGGAAAGCACAGACAATaGCATAGGGAGCCTGGTTCC +
Preference number: 5 (lower is better)
Translates to: TFITRGLMVPEQKETKVRGKHRQ*HREPGS
Trigger: GGAACCAGGCTCCCTATGCAATTGTCTGTGCTTTCC...CCTGACCTTTGTTTCTTTCTGTTCAGGAACCATCAGTCCCCTTGTAATAAAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CAA 90 bp ACCTCAATGAAATCTACCACCTTTATTACAAGGGGACTGATGGTTCCTGAACAGCTGCCAGGACACTGTTaGACAGGCTCCAAGAAAGAC +
Preference number: 5 (lower is better)
Translates to: TSMKSTTFITRGLMVPEQLPGHC*TGSKKD
Trigger: GTCTTTCTTGGAGCCTGTCAAACAGTGTCCTGGCAG...CTGTTCAGGAACCATCAGTCCCCTTGTAATAAAGGTGGTAGATTTCATTGAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435213.6
CDS CCA 90 bp TGGGGTTTGCGGGCAAAGCCAGATAGAGTGAAAGACTGCATGTGCTaGGGAATGTCTAGGCTTGATGACTCTATTCTTTTAGCTTTCAAA +
Preference number: 5 (lower is better)
Translates to: WGLRAKPDRVKDCMC*GMSRLDDSILLAFK
Trigger: TTTGAAAGCTAAAAGAATAGAGTCATCAAGCCTAGACATTCCCCAGCACATGCAGTCTTTCACTCTATCTGGCTTTGCCCGCAAACCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463005.1
CDS CCA 90 bp TCACACTTTATTCTTTCTCTGTTCTTCATGTCAAGAGAGGCAGCATaGTGCAATGAAAAGGGTGTCAGAACACCTAGTTCCGTGGTCTGG +
Preference number: 5 (lower is better)
Translates to: SHFILSLFFMSREAA*CNEKGVRTPSSVVW
Trigger: CCAGACCACGGAACTAGGTGTTCTGACACCCTTTTCATTGCACCATGCTGCCTCTCTTGACATGAAGAACAGAGAAAGAATAAAGTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481242.5
ENST00000496711.5
CDS-3UTR CAA 90 bp CACGGACAAGAAGAAAGGGCTCTTCTCGGCATCGTTTCCAATGTAGTTCTGATGGTATTGAGGGACACGTaGATTGTTTTGGTCAGAAAG +
Preference number: 5 (lower is better)
Translates to: HGQEERALLGIVSNVVLMVLRDT*IVLVRK
Trigger: CTTTCTGACCAAAACAATCAACGTGTCCCTCAATAC...CATCAGAACTACATTGGAAACGATGCCGAGAAGAGCCCTTTCTTCTTGTCCGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429629.6
ENST00000441134.5
ENST00000453030.5
CDS-3UTR CAA 90 bp TGCACGGTATTGAGGGACACGTTGATTGTTTTGGTCAGAAAGGGTCACGGACAATTTTTCTCCAAAGAATaGCACGGTATTGAGGGACAC +
Preference number: 5 (lower is better)
Translates to: CTVLRDTLIVLVRKGHGQFFSKE*HGIEGH
Trigger: GTGTCCCTCAATACCGTGCAATTCTTTGGAGAAAAA...TTGTCCGTGACCCTTTCTGACCAAAACAATCAACGTGTCCCTCAATACCGTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000429629.6
ENST00000441134.5
ENST00000453030.5
CDS-3UTR CAA 90 bp TGGGGCCTTTCTCAAATTTGTCCAGATTCATGGCACTTAAGATGGACTTCACAGTCACAGAAAGAGTTTTaGTGGGACTGTAGGGAAGGC +
Preference number: 5 (lower is better)
Translates to: WGLSQICPDSWHLRWTSQSQKEF*WDCREG
Trigger: GCCTTCCCTACAGTCCCACAAAAACTCTTTCTGTGA...CTGTGAAGTCCATCTTAAGTGCCATGAATCTGGACAAATTTGAGAAAGGCCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429629.6
CDS-3UTR CAA 90 bp TGGTTCCTGAACAGAAAGAAACAAAGGTCAGGAAAGATGGCACCGGACATTGGAGGGCCTTTCTCAAATTaGTCCAGATTCATGGCACTT +
Preference number: 5 (lower is better)
Translates to: WFLNRKKQRSGKMAPDIGGPFSN*SRFMAL
Trigger: AAGTGCCATGAATCTGGACAAATTTGAGAAAGGCCC...TCCAATGTCCGGTGCCATCTTTCCTGACCTTTGTTTCTTTCTGTTCAGGAACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CAA 90 bp GGACTGATGGTTCCTGAACAGAAAGAAACAAAGGTCAGGAAAGATGGCACCGGAATTCACCACATCAAATaGGTGTCGATAAGCCACACA +
Preference number: 5 (lower is better)
Translates to: GLMVPEQKETKVRKDGTGIHHIK*VSISHT
Trigger: TGTGTGGCTTATCGACACCAATTTGATGTGGTGAAT...TCCGGTGCCATCTTTCCTGACCTTTGTTTCTTTCTGTTCAGGAACCATCAGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CAA 90 bp ACCACCTTTATTACAAGGGGACTGATGGTTCCTGAACAGAAAGAAACAAAGGTCGTTTTGATTTGGCCTTaGGCGCTCCTTCTGACTTGG +
Preference number: 5 (lower is better)
Translates to: TTFITRGLMVPEQKETKVVLIWP*ALLLTW
Trigger: CCAAGTCAGAAGGAGCGCCAAAGGCCAAATCAAAAC...GACCTTTGTTTCTTTCTGTTCAGGAACCATCAGTCCCCTTGTAATAAAGGTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CAA 90 bp GAATTGCACGGTATTGAGGGACACGTTGATTGTTTTGGTCAGAAAGGGTCACGGGAAATAAGTTACAGGTaGACCTGGGACTCTAGTTCA +
Preference number: 5 (lower is better)
Translates to: ELHGIEGHVDCFGQKGSREISYR*TWDSSS
Trigger: TGAACTAGAGTCCCAGGTCAACCTGTAACTTATTTC...CCGTGACCCTTTCTGACCAAAACAATCAACGTGTCCCTCAATACCGTGCAATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453030.5
CDS GCA 90 bp GGCTCGCTTCCAATTTCATTGCTGAACATCTCATCATCAGTGAGCTaGCCATCTTTGGCAAAAAGAACCCCAAACTTGAAATTCACAGAG +
Preference number: 5 (lower is better)
Translates to: GSLPISLLNISSSVS*PSLAKRTPNLKFTE
Trigger: CTCTGTGAATTTCAAGTTTGGGGTTCTTTTTGCCAAAGATGGGCAGCTCACTGATGATGAGATGTTCAGCAATGAAATTGGAAGCGAGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
ENST00000439286.5
ENST00000495172.1
CDS CCA 90 bp TCACCATTAATTAATTTCACTAGCAAAAAGTCCCTGAATTCCTGGTaGTCTGTAAACACTGGTGGAGTTGGCAAGGGAGGGCCAAAGAGT +
Preference number: 5 (lower is better)
Translates to: SPLINFTSKKSLNSW*SVNTGGVGKGGPKS
Trigger: ACTCTTTGGCCCTCCCTTGCCAACTCCACCAGTGTTTACAGACCACCAGGAATTCAGGGACTTTTTGCTAGTGAAATTAATTAATGGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CAA 90 bp GGACTGATGGTTCCTGAACAGAAAGAAACAAAGGTCAGGAAAGATGGCACCGGAAAAATCAACTACCATTaGCAAAAAGGGCTGCTATGG +
Preference number: 5 (lower is better)
Translates to: GLMVPEQKETKVRKDGTGKINYH*QKGLLW
Trigger: CCATAGCAGCCCTTTTTGCAAATGGTAGTTGATTTT...TCCGGTGCCATCTTTCCTGACCTTTGTTTCTTTCTGTTCAGGAACCATCAGTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000373387.9
CDS-3UTR CAA 90 bp TGGTTCCTGAACAGAAAGAAACAAAGGTCAGGAAAGATGGCACCGGACATTGGAGTATTGAGGGACACGTaGATTGTTTTGGTCAGAAAG +
Preference number: 5 (lower is better)
Translates to: WFLNRKKQRSGKMAPDIGVLRDT*IVLVRK
Trigger: CTTTCTGACCAAAACAATCAACGTGTCCCTCAATAC...TCCAATGTCCGGTGCCATCTTTCCTGACCTTTGTTTCTTTCTGTTCAGGAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CAA 90 bp TCACGGACAAGAAGAAAGGGCTCTTCTCGGCATCGTTTCCAATGTAGTTCTGATTTTTTCTCCAAAGAATaGCACGGTATTGAGGGACAC +
Preference number: 5 (lower is better)
Translates to: SRTRRKGSSRHRFQCSSDFFSKE*HGIEGH
Trigger: GTGTCCCTCAATACCGTGCAATTCTTTGGAGAAAAA...ATCAGAACTACATTGGAAACGATGCCGAGAAGAGCCCTTTCTTCTTGTCCGTGA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000429629.6
ENST00000441134.5
ENST00000453030.5
CDS-3UTR CAA 90 bp AGAAGAAAGGGCTCTTCTCGGCATCGTTTCCAATGTAGTTCTGATGGACTTGTCTTTTTCTCCAAAGAATaGCACGGTATTGAGGGACAC +
Preference number: 5 (lower is better)
Translates to: RRKGSSRHRFQCSSDGLVFFSKE*HGIEGH
Trigger: GTGTCCCTCAATACCGTGCAATTCTTTGGAGAAAAA...GACAAGTCCATCAGAACTACATTGGAAACGATGCCGAGAAGAGCCCTTTCTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000429629.6
ENST00000441134.5
ENST00000453030.5
CDS-3UTR CAA 90 bp GGACTGATGGTTCCTGAACAGAAAGAAACAAAGGTCAGGAAAGATGGCACCGGATCGCTTCCAATTTCATaGCTGAACATCTCATCATCA +
Preference number: 5 (lower is better)
Translates to: GLMVPEQKETKVRKDGTGSLPIS*LNISSS
Trigger: TGATGATGAGATGTTCAGCAATGAAATTGGAAGCGA...TCCGGTGCCATCTTTCCTGACCTTTGTTTCTTTCTGTTCAGGAACCATCAGTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CAA 90 bp ACAAGGGGACTGATGGTTCCTGAACAGAAAGAAACAAAGGTCAGGAAAGATGGCTGCTGTTTGTTCTCTTaGGAATATGGCAACATGGTG +
Preference number: 5 (lower is better)
Translates to: TRGLMVPEQKETKVRKDGCCLFS*EYGNMV
Trigger: CACCATGTTGCCATATTCCAAAGAGAACAAACAGCA...GCCATCTTTCCTGACCTTTGTTTCTTTCTGTTCAGGAACCATCAGTCCCCTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CAA 90 bp ACCACCTTTATTACAAGGGGACTGATGGTTCCTGAACAGAAAGAAACAAAGGTCCTCAAGCACATGCATTaGCTTCACTGGCAGAGTTCT +
Preference number: 5 (lower is better)
Translates to: TTFITRGLMVPEQKETKVLKHMH*LHWQSS
Trigger: AGAACTCTGCCAGTGAAGCAAATGCATGTGCTTGAG...GACCTTTGTTTCTTTCTGTTCAGGAACCATCAGTCCCCTTGTAATAAAGGTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CAA 90 bp ACCTTTATTACAAGGGGACTGATGGTTCCTGAACAGAAAGAAACAAAGGTCAGGCGAGCATCTTTTCCTTaGTCTGCTCTGAGAACCAGA +
Preference number: 5 (lower is better)
Translates to: TFITRGLMVPEQKETKVRRASFP*SALRTR
Trigger: TCTGGTTCTCAGAGCAGACAAAGGAAAAGATGCTCG...CCTGACCTTTGTTTCTTTCTGTTCAGGAACCATCAGTCCCCTTGTAATAAAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CAA 90 bp AGAAAGGGCTCTTCTCGGCATCGTTTCCAATGTAGTTCTGATGGACTTGTCCTAAGGAGAGAGACGACTTaGCTTTCCATAGAATGGTTT +
Preference number: 5 (lower is better)
Translates to: RKGSSRHRFQCSSDGLVLRRETT*LSIEWF
Trigger: AAACCATTCTATGGAAAGCAAAGTCGTCTCTCTCCT...TAGGACAAGTCCATCAGAACTACATTGGAAACGATGCCGAGAAGAGCCCTTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429629.6
ENST00000441134.5
ENST00000453030.5
CDS-3UTR CAA 90 bp TTGAAATACCATCTGGTGTGGTATTCTGGGTTCTCTAAGTGCACGTCTGTTCTTAGACAGAGTTACAGGTaGACCTGGGACTCTAGTTCA +
Preference number: 5 (lower is better)
Translates to: LKYHLVWYSGFSKCTSVLRQSYR*TWDSSS
Trigger: TGAACTAGAGTCCCAGGTCAACCTGTAACTCTGTCT...AAGAACAGACGTGCACTTAGAGAACCCAGAATACCACACCAGATGGTATTTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441134.5
CDS TCA 90 bp GGAAACATGAAACATGATCTCATGCCCTTGGTACACAGTATAAACTaGATGTATCCCTGTGGTATCATTTTTGGTATCCAGACCGCCACG +
Preference number: 5 (lower is better)
Translates to: GNMKHDLMPLVHSIN*MYPCGIIFGIQTAT
Trigger: CGTGGCGGTCTGGATACCAAAAATGATACCACAGGGATACATTCAGTTTATACTGTGTACCAAGGGCATGAGATCATGTTTCATGTTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
ENST00000495172.1
CDS GCA 90 bp TGGTTTATAATTTCATTTCTGTATAACCAGAGAGGAGAGAAGCCCTaGAGTAAACTTGAGGCAAGGGACAAAGCTGCTGAACCGGATCTT +
Preference number: 5 (lower is better)
Translates to: WFIISFLYNQRGEKP*SKLEARDKAAEPDL
Trigger: AAGATCCGGTTCAGCAGCTTTGTCCCTTGCCTCAAGTTTACTGCAGGGCTTCTCTCCTCTCTGGTTATACAGAAATGAAATTATAAACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487565.5
CDS CCA 90 bp TTTTCACCATTAATTAATTTCACTAGCAAAAAGTCCCTGAATTCCTaGTGGTCTGTAAACACTGGTGGAGTTGGCAAGGGAGGGCCAAAG +
Preference number: 5 (lower is better)
Translates to: FSPLINFTSKKSLNS*WSVNTGGVGKGGPK
Trigger: CTTTGGCCCTCCCTTGCCAACTCCACCAGTGTTTACAGACCACCAGGAATTCAGGGACTTTTTGCTAGTGAAATTAATTAATGGTGAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CAA 90 bp TGGACTTCACAGAAAGAGTTTTTGTGGGACTGTAGGGAAGGCATATTTTCTGGGAAGAATTGCACGGTATaGAGGGACACGTTGATTGTT +
Preference number: 5 (lower is better)
Translates to: WTSQKEFLWDCREGIFSGKNCTV*RDTLIV
Trigger: AACAATCAACGTGTCCCTCAATACCGTGCAATTCTT...CCCAGAAAATATGCCTTCCCTACAGTCCCACAAAAACTCTTTCTGTGAAGTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000429629.6
ENST00000441134.5
CDS-3UTR CAA 90 bp ACCTCAATGAAATCTACCACCTTTATTACAAGGGGACTGATGGTTCCTGAACAGAGATTCCTCTCCTTCTaGGAACACAATGGTGACGAT +
Preference number: 5 (lower is better)
Translates to: TSMKSTTFITRGLMVPEQRFLSF*EHNGDD
Trigger: ATCGTCACCATTGTGTTCCAAGAAGGAGAGGAATCT...CTGTTCAGGAACCATCAGTCCCCTTGTAATAAAGGTGGTAGATTTCATTGAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CAA 90 bp ACCACCTTTATTACAAGGGGACTGATGGTTCCTGAACAGAAAGAAACAAAGGTCGCAGTTTATTCCGAATaGCAACCACAATCCTCAGCT +
Preference number: 5 (lower is better)
Translates to: TTFITRGLMVPEQKETKVAVYSE*QPQSSA
Trigger: AGCTGAGGATTGTGGTTGCAATTCGGAATAAACTGC...GACCTTTGTTTCTTTCTGTTCAGGAACCATCAGTCCCCTTGTAATAAAGGTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CAA 90 bp TGGACTTCACAGAAAGAGTTTTTGTGGGACTGTAGGGAAGGCATATTTTCTGGGAGGAGAGAGACGACTTaGCTTTCCATAGAATGGTTT +
Preference number: 5 (lower is better)
Translates to: WTSQKEFLWDCREGIFSGRRETT*LSIEWF
Trigger: AAACCATTCTATGGAAAGCAAAGTCGTCTCTCTCCT...CCCAGAAAATATGCCTTCCCTACAGTCCCACAAAAACTCTTTCTGTGAAGTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000429629.6
ENST00000441134.5
CDS-3UTR CAA 90 bp GTATTGAGGGACACGTTGATTGTTTTGGTCAGAAAGGGTCACGGACAAGAAGAAAGGAGAGAGACGACTTaGCTTTCCATAGAATGGTTT +
Preference number: 5 (lower is better)
Translates to: VLRDTLIVLVRKGHGQEERRETT*LSIEWF
Trigger: AAACCATTCTATGGAAAGCAAAGTCGTCTCTCTCCT...TTCTTCTTGTCCGTGACCCTTTCTGACCAAAACAATCAACGTGTCCCTCAATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429629.6
ENST00000441134.5
ENST00000453030.5
CDS-3UTR CAA 90 bp ACTTCACAGAAAGAGTTTTTGTGGGACTGTAGGGAAGGCATATTTTCTGGGTACACTGGAAATAAGAGGTaGACCTGGGACTCTAGTTCA +
Preference number: 5 (lower is better)
Translates to: TSQKEFLWDCREGIFSGYTGNKR*TWDSSS
Trigger: TGAACTAGAGTCCCAGGTCAACCTCTTATTTCCAGT...GTACCCAGAAAATATGCCTTCCCTACAGTCCCACAAAAACTCTTTCTGTGAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000429629.6
CDS-3UTR CAA 90 bp TCATGGCACTTAAGATGGACTTCACAGAAAGAGTTTTTGTGGGACTGTAGGGAAGTATTGAGGGACACGTaGATTGTTTTGGTCAGAAAG +
Preference number: 5 (lower is better)
Translates to: SWHLRWTSQKEFLWDCREVLRDT*IVLVRK
Trigger: CTTTCTGACCAAAACAATCAACGTGTCCCTCAATAC...TTCCCTACAGTCCCACAAAAACTCTTTCTGTGAAGTCCATCTTAAGTGCCATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000429629.6
CDS-3UTR CAA 90 bp ACTTCACAGAAAGAGTTTTTGTGGGACTGTAGGGAAGGCATATTTTCTGGGTACAAGAATTGCACGGTATaGAGGGACACGTTGATTGTT +
Preference number: 5 (lower is better)
Translates to: TSQKEFLWDCREGIFSGYKNCTV*RDTLIV
Trigger: AACAATCAACGTGTCCCTCAATACCGTGCAATTCTT...GTACCCAGAAAATATGCCTTCCCTACAGTCCCACAAAAACTCTTTCTGTGAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000429629.6
ENST00000441134.5
CDS-3UTR CAA 90 bp ACCTTTATTACAAGGGGACTGATGGTTCCTGAACAGAAAGAAACAAAGGTCAGGATTCACCACATCAAATaGGTGTCGATAAGCCACACA +
Preference number: 5 (lower is better)
Translates to: TFITRGLMVPEQKETKVRIHHIK*VSISHT
Trigger: TGTGTGGCTTATCGACACCAATTTGATGTGGTGAAT...CCTGACCTTTGTTTCTTTCTGTTCAGGAACCATCAGTCCCCTTGTAATAAAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS GCA 90 bp CCATTCAGTGATGGCCACAATTATTATAATTATGGGAGGGTTGACTaGAGTGGGAAAGGTGGAACTAGACAGGCTTTTAGTTTAGAGATA +
Preference number: 5 (lower is better)
Translates to: PFSDGHNYYNYGRVD*SGKGGTRQAFSLEI
Trigger: TATCTCTAAACTAAAAGCCTGTCTAGTTCCACCTTTCCCACTGCAGTCAACCCTCCCATAATTATAATAATTGTGGCCATCACTGAATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481242.5
CDS CCA 90 bp GATCGTCTATTAAGCATGTTCTTATGCAAATCTGGCATCAAATCCTaGTGTAAAGATCTAATCAACATATCCAGGGTACGCCGACGTTTC +
Preference number: 5 (lower is better)
Translates to: DRLLSMFLCKSGIKS*CKDLINISRVRRRF
Trigger: GAAACGTCGGCGTACCCTGGATATGTTGATTAGATCTTTACACCAGGATTTGATGCCAGATTTGCATAAGAACATGCTTAATAGACGATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS-3UTR CAA 90 bp AGCATCACTGGAAATAAGCAGCTCCACAGATCCATAATGTTTCCTACTGAAATCGTATTGAGGGACACGTaGATTGTTTTGGTCAGAAAG +
Preference number: 5 (lower is better)
Translates to: SITGNKQLHRSIMFPTEIVLRDT*IVLVRK
Trigger: CTTTCTGACCAAAACAATCAACGTGTCCCTCAATAC...GATTTCAGTAGGAAACATTATGGATCTGTGGAGCTGCTTATTTCCAGTGATGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441134.5
CDS TCA 90 bp GTTTGTTCTCTTTGGAATATGGCAACATGGTGGAAACATGAAACATaGTCTCATGCCCTTGGTACACAGTATAAACTGAATGTATCCCTG +
Preference number: 5 (lower is better)
Translates to: VCSLWNMATWWKHET*SHALGTQYKLNVSL
Trigger: CAGGGATACATTCAGTTTATACTGTGTACCAAGGGCATGAGATCATGTTTCATGTTTCCACCATGTTGCCATATTCCAAAGAGAACAAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
ENST00000495172.1
CDS TCA 90 bp ATAGCCGTTGAGAAGCTCTGTGTTTGGTATGTCTCCTCTCTCTATTaGAATGCCTCAGGTTTATATGCCATTATTTCCAATGGCAAAAAC +
Preference number: 5 (lower is better)
Translates to: IAVEKLCVWYVSSLY*NASGLYAIISNGKN
Trigger: GTTTTTGCCATTGGAAATAATGGCATATAAACCTGAGGCATTTCAATAGAGAGAGGAGACATACCAAACACAGAGCTTCTCAACGGCTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481242.5
CDS GCA 90 bp AATGCTTCATCAGTATTATACATAGCGATCTGGCCACAAACCTTCTaGAAAAATCAACTACCATTTGCAAAAAGGGCTGCTATGGAACAG +
Preference number: 5 (lower is better)
Translates to: NASSVLYIAIWPQTF*KNQLPFAKRAAMEQ
Trigger: CTGTTCCATAGCAGCCCTTTTTGCAAATGGTAGTTGATTTTTGCAGAAGGTTTGTGGCCAGATCGCTATGTATAATACTGATGAAGCATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000373387.9
CDS-3UTR CAA 90 bp TTTGTATTTCAGGATGAAAAATTTCCCTGGGGCCTTTCTCAAATTTGTCCAGATGGGCCTTTCTCAAATTaGTCCAGATTCATGGCACTT +
Preference number: 5 (lower is better)
Translates to: FVFQDEKFPWGLSQICPDGPFSN*SRFMAL
Trigger: AAGTGCCATGAATCTGGACAAATTTGAGAAAGGCCC...ATCTGGACAAATTTGAGAAAGGCCCCAGGGAAATTTTTCATCCTGAAATACAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000429629.6
CDS TCA 90 bp GCACATTATTTACAAGAGAGTAATTTCTTGTTCCTTAACATAGCATaGAGGAAGACGTTATGTCACACACTGATCTGTAATGTCCCACTG +
Preference number: 5 (lower is better)
Translates to: AHYLQESNFLFLNIA*RKTLCHTLICNVPL
Trigger: CAGTGGGACATTACAGATCAGTGTGTGACATAACGTCTTCCTTCATGCTATGTTAAGGAACAAGAAATTACTCTCTTGTAAATAATGTGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463005.1
CDS GCA 72 bp GGGCAGCTGTCCTTGGGCTCTCGAAGCTGCACCCCCTaGGCCGCAGCGCCGCCCTCTTCTGCCGCAGGAGCG +
Preference number: 6 (lower is better)
Translates to: GQLSLGSRSCTP*AAAPPSSAAGA
Trigger: CGCTCCTGCGGCAGAAGAGGGCGGCGCTGCGGCGCAGGGGGTGCAGCTTCGAGAGCCCAAGGACAGCTGCCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000446764.5
CDS GCA 72 bp CCGGCAGCGATCGCAGTCCCGCAGCCTGCACCCCCGTaGGCGTGGCAGCTTTGCCATCCCTCCGGCCGCCAA +
Preference number: 6 (lower is better)
Translates to: PAAIAVPQPAPP*AWQLCHPSGRQ
Trigger: TTGGCGGCCGGAGGGATGGCAAAGCTGCCACGCGCACGGGGGTGCAGGCTGCGGGACTGCGATCGCTGCCGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478702.5
CDS GCA 72 bp CTGGAGGCTGGGCAGCTGTCCTTGGGCTCTCGAAGCTaGACCCCCTGCGCCGCAGCGCCGCCCTCTTCTGCC +
Preference number: 6 (lower is better)
Translates to: LEAGQLSLGSRS*TPCAAAPPSSA
Trigger: GGCAGAAGAGGGCGGCGCTGCGGCGCAGGGGGTGCAGCTTCGAGAGCCCAAGGACAGCTGCCCAGCCTCCAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000446764.5
CDS CAA 72 bp CCGGGGCTAAAGCGGCGTTCCGACGTCCGGTCTGCGTaGGCTCCGGGATCCCGCCACCCATCAAGGGGGAGG +
Preference number: 6 (lower is better)
Translates to: PGLKRRSDVRSA*APGSRHPSRGR
Trigger: CCTCCCCCTTGATGGGTGGCGGGATCCCGGAGCCAACGCAGACCGGACGTCGGAACGCCGCTTTAGCCCCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439286.5
CDS GCA 72 bp TGTCCCGGGGCTAAAGCGGCGTTCCGACGTCCGGTCTaGGTTGGCTCCGGGATCCCGCCACCCATCAAGGGG +
Preference number: 6 (lower is better)
Translates to: CPGAKAAFRRPV*VGSGIPPPIKG
Trigger: CCCCTTGATGGGTGGCGGGATCCCGGAGCCAACGCAGACCGGACGTCGGAACGCCGCTTTAGCCCCGGGACA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439286.5
CDS GCA 72 bp CTGGTCCTATCCGGCAGCGATCGCAGTCCCGCAGCCTaGACCCCCGTGCGCGTGGCAGCTTTGCCATCCCTC +
Preference number: 6 (lower is better)
Translates to: LVLSGSDRSPAA*TPVRVAALPSL
Trigger: GAGGGATGGCAAAGCTGCCACGCGCACGGGGGTGCAGGCTGCGGGACTGCGATCGCTGCCGGATAGGACCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478702.5
CDS CAA 90 bp GCTGGGCAGCTGTCCCCAAACCTCTGCTTCCGCGAGCGTCGTCCCTaGGAGTTCGGCCTCTCCTCGCCTCAGCACCTCCTGGCCCTTTCT +
Preference number: 6 (lower is better)
Translates to: AGQLSPNLCFRERRP*EFGLSSPQHLLALS
Trigger: AGAAAGGGCCAGGAGGTGCTGAGGCGAGGAGAGGCCGAACTCCAAGGGACGACGCTCGCGGAAGCAGAGGTTTGGGGACAGCTGCCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444677.5
CDS GCA 72 bp TGCCAGACTGGGAGCTTCTCCACGGGAGGGGCCGAGTaGTACCAGCTTTGTGGCTGGACCTGCTATCCCCAC +
Preference number: 6 (lower is better)
Translates to: CQTGSFSTGGAE*YQLCGWTCYPH
Trigger: GTGGGGATAGCAGGTCCAGCCACAAAGCTGGTAGCACTCGGCCCCTCCCGTGGAGAAGCTCCCAGTCTGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481242.5
CDS CAA 72 bp GAGCTTCTCCACGGGAGGGGCCGAGTGCTACCAGCTTaGTGGCTGGACCTGCTATCCCCACCAGCTGTGGGA +
Preference number: 6 (lower is better)
Translates to: ELLHGRGRVLPA*WLDLLSPPAVG
Trigger: TCCCACAGCTGGTGGGGATAGCAGGTCCAGCCACAAAGCTGGTAGCACTCGGCCCCTCCCGTGGAGAAGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481242.5
CDS CAA 90 bp CCAGACTGGGAGCTTCTCCACGGGAGGGGCCGAGTGCTACCAGCTTaGTGGCTGGACCTGCTATCCCCACCAGCTGTGGGAACATGGTCT +
Preference number: 6 (lower is better)
Translates to: PDWELLHGRGRVLPA*WLDLLSPPAVGTWS
Trigger: AGACCATGTTCCCACAGCTGGTGGGGATAGCAGGTCCAGCCACAAAGCTGGTAGCACTCGGCCCCTCCCGTGGAGAAGCTCCCAGTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481242.5
CDS GCA 72 bp GGAGGGGCCGAGTGCTACCAGCTTTGTGGCTGGACCTaGTATCCCCACCAGCTGTGGGAACATGGTCTCTGG +
Preference number: 6 (lower is better)
Translates to: GGAECYQLCGWT*YPHQLWEHGLW
Trigger: CCAGAGACCATGTTCCCACAGCTGGTGGGGATAGCAGGTCCAGCCACAAAGCTGGTAGCACTCGGCCCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481242.5
CDS GCA 72 bp AGGCTCATGACGCAAAGGCCTGTCTGTGCTGCTCACTaGTGGCCCCTCATCATCCAGATCAGGGCCTGGCGG +
Preference number: 6 (lower is better)
Translates to: RLMTQRPVCAAH*WPLIIQIRAWR
Trigger: CCGCCAGGCCCTGATCTGGATGATGAGGGGCCAGCAGTGAGCAGCACAGACAGGCCTTTGCGTCATGAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481242.5
CDS GCA 72 bp CTGACCTCCTCACAGGAGCACCATGTTGTGGGCTCCTaGTGGCTCCTCTGTCCCAGCCCTTCCGTCCACACT +
Preference number: 6 (lower is better)
Translates to: LTSSQEHHVVGS*WLLCPSPSVHT
Trigger: AGTGTGGACGGAAGGGCTGGGACAGAGGAGCCAGCAGGAGCCCACAACATGGTGCTCCTGTGAGGAGGTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481242.5
CDS CCA 72 bp TCCACGGGAGGGGCCGAGTGCTACCAGCTTTGTGGCTaGACCTGCTATCCCCACCAGCTGTGGGAACATGGT +
Preference number: 6 (lower is better)
Translates to: STGGAECYQLCG*TCYPHQLWEHG
Trigger: ACCATGTTCCCACAGCTGGTGGGGATAGCAGGTCCAGCCACAAAGCTGGTAGCACTCGGCCCCTCCCGTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481242.5
CDS CCA 72 bp CTTCTCCACGGGAGGGGCCGAGTGCTACCAGCTTTGTaGCTGGACCTGCTATCCCCACCAGCTGTGGGAACA +
Preference number: 6 (lower is better)
Translates to: LLHGRGRVLPAL*LDLLSPPAVGT
Trigger: TGTTCCCACAGCTGGTGGGGATAGCAGGTCCAGCCACAAAGCTGGTAGCACTCGGCCCCTCCCGTGGAGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481242.5
CDS CCA 72 bp ACCTGCTATCCCCACCAGCTGTGGGAACATGGTCTCTaGAGTCAGCCAGCTGGGGTCCAAGTCCTGCCTCTG +
Preference number: 6 (lower is better)
Translates to: TCYPHQLWEHGL*SQPAGVQVLPL
Trigger: CAGAGGCAGGACTTGGACCCCAGCTGGCTGACTCCAGAGACCATGTTCCCACAGCTGGTGGGGATAGCAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481242.5
CDS CCA 72 bp TGGCTGGACCTGCTATCCCCACCAGCTGTGGGAACATaGTCTCTGGAGTCAGCCAGCTGGGGTCCAAGTCCT +
Preference number: 6 (lower is better)
Translates to: WLDLLSPPAVGT*SLESASWGPSP
Trigger: AGGACTTGGACCCCAGCTGGCTGACTCCAGAGACCATGTTCCCACAGCTGGTGGGGATAGCAGGTCCAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481242.5
CDS CCA 72 bp CAGCTTTGTGGCTGGACCTGCTATCCCCACCAGCTGTaGGAACATGGTCTCTGGAGTCAGCCAGCTGGGGTC +
Preference number: 6 (lower is better)
Translates to: QLCGWTCYPHQL*EHGLWSQPAGV
Trigger: GACCCCAGCTGGCTGACTCCAGAGACCATGTTCCCACAGCTGGTGGGGATAGCAGGTCCAGCCACAAAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481242.5
CDS TCA 72 bp GAAGGAAATACTGGAGTATCTCGGCCCGGGGGTGTCTaGGGAGAATTTCGGGCACTGGCCCCCTTGGAGCTG +
Preference number: 6 (lower is better)
Translates to: EGNTGVSRPGGV*GEFRALAPLEL
Trigger: CAGCTCCAAGGGGGCCAGTGCCCGAAATTCTCCTCAGACACCCCCGGGCCGAGATACTCCAGTATTTCCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000373387.9
ENST00000435213.6
ENST00000481242.5
ENST00000496711.5
ENST00000497703.1
CDS GCA 72 bp GCTGTGAAGTATATATCCGACCTGGAGGCCACCAGCTaGAGCTGCGGCACGACTGCAGTGTGGACCAGGTTC +
Preference number: 6 (lower is better)
Translates to: AVKYISDLEATS*SCGTTAVWTRF
Trigger: GAACCTGGTCCACACTGCAGTCGTGCCGCAGCTGCAGCTGGTGGCCTCCAGGTCGGATATATACTTCACAGC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373387.9
ENST00000435213.6
ENST00000481242.5
ENST00000496711.5
CDS GCA 72 bp GTTGTGAGCATTTGTGGAGGCCGAGGCCCTCTGTCATaGAGGTGCCATAGGGTCATGTCTGCCCCACCAGCA +
Preference number: 6 (lower is better)
Translates to: VVSICGGRGPLS*RCHRVMSAPPA
Trigger: TGCTGGTGGGGCAGACATGACCCTATGGCACCTGCATGACAGAGGGCCTCGGCCTCCACAAATGCTCACAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481242.5
CDS CCA 72 bp GGGGTGTCTGAGGAGAATTTCGGGCACTGGCCCCCTTaGAGCTGCCTCCAGATGAGACCTCATTCACAGCTG +
Preference number: 6 (lower is better)
Translates to: GVSEENFGHWPP*SCLQMRPHSQL
Trigger: CAGCTGTGAATGAGGTCTCATCTGGAGGCAGCTCCAAGGGGGCCAGTGCCCGAAATTCTCCTCAGACACCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000373387.9
ENST00000435213.6
ENST00000481242.5
ENST00000496711.5
ENST00000497703.1
CDS CCA 72 bp TGGGGTGGTTGGAGGGGCACAGACTGGGCAGACAGATaGGAGATCAAGCCCTGTCTAGGCCACTTACTGCCT +
Preference number: 6 (lower is better)
Translates to: WGGWRGTDWADR*EIKPCLGHLLP
Trigger: AGGCAGTAAGTGGCCTAGACAGGGCTTGATCTCCCATCTGTCTGCCCAGTCTGTGCCCCTCCAACCACCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481242.5
CDS TCA 72 bp CGTTCACCACCAGGCGGATCTCCATGGAGTCGGTGGTaGAGGCCAGGAGATACGGGAAAGCACAGACAATTG +
Preference number: 6 (lower is better)
Translates to: RSPPGGSPWSRW*RPGDTGKHRQL
Trigger: CAATTGTCTGTGCTTTCCCGTATCTCCTGGCCTTCACCACCGACTCCATGGAGATCCGCCTGGTGGTGAACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
ENST00000481242.5
ENST00000496711.5
CDS GCA 72 bp TCTGAGGAGAATTTCGGGCACTGGCCCCCTTGGAGCTaGCTCCAGATGAGACCTCATTCACAGCTGCAGTTG +
Preference number: 6 (lower is better)
Translates to: SEENFGHWPPWS*LQMRPHSQLQL
Trigger: CAACTGCAGCTGTGAATGAGGTCTCATCTGGAGGCAGCTCCAAGGGGGCCAGTGCCCGAAATTCTCCTCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000373387.9
ENST00000435213.6
ENST00000481242.5
ENST00000496711.5
ENST00000497703.1
CDS GCA 72 bp AGATCTAAGGCTCATGACGCAAAGGCCTGTCTGTGCTaGTCACTGCTGGCCCCTCATCATCCAGATCAGGGC +
Preference number: 6 (lower is better)
Translates to: RSKAHDAKACLC*SLLAPHHPDQG
Trigger: GCCCTGATCTGGATGATGAGGGGCCAGCAGTGAGCAGCACAGACAGGCCTTTGCGTCATGAGCCTTAGATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481242.5
CDS CCA 72 bp AGTTTTAGTGCCTGCCCTATTCTAACAAACTCCGCCTaGCGGGCCTCCTCTTTCTTCCGCGCTGACTTGGGT +
Preference number: 6 (lower is better)
Translates to: SFSACPILTNSA*RASSFFRADLG
Trigger: ACCCAAGTCAGCGCGGAAGAAAGAGGAGGCCCGCCAGGCGGAGTTTGTTAGAATAGGGCAGGCACTAAAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
ENST00000460176.6
CDS CCA 72 bp GAGATCAAGCCCTGTCTAGGCCACTTACTGCCTCTGTaGTGTGTGGCAAATGGCTTAGCCTCTGGCCTTAGG +
Preference number: 6 (lower is better)
Translates to: EIKPCLGHLLPL*CVANGLASGLR
Trigger: CCTAAGGCCAGAGGCTAAGCCATTTGCCACACACCACAGAGGCAGTAAGTGGCCTAGACAGGGCTTGATCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481242.5
CDS CAA 72 bp TCCGCCTGGCGGGCCTCCTCTTTCTTCCGCGCTGACTaGGGTGACTCTGGTAAGACATCACTAAAAGATCGT +
Preference number: 6 (lower is better)
Translates to: SAWRASSFFRAD*GDSGKTSLKDR
Trigger: ACGATCTTTTAGTGATGTCTTACCAGAGTCACCCAAGTCAGCGCGGAAGAAAGAGGAGGCCCGCCAGGCGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
ENST00000460176.6
CDS CAA 72 bp AGAGTGTCCCTCACCCTCTGGTGCTCTCTTGTCTGTTaGTTCCCTGTGGCTCCCCTCCCCATGAGATCTAAG +
Preference number: 6 (lower is better)
Translates to: RVSLTLWCSLVC*FPVAPLPMRSK
Trigger: CTTAGATCTCATGGGGAGGGGAGCCACAGGGAACAAACAGACAAGAGAGCACCAGAGGGTGAGGGACACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481242.5
CDS TCA 72 bp TGGGACTCTAGTTCAGGGTCTTTCGTTGGCCATGTCTaGAGGGGCTGGATGCCGAAGGAGAGAGACGACTTT +
Preference number: 6 (lower is better)
Translates to: WDSSSGSFVGHV*RGWMPKERDDF
Trigger: AAAGTCGTCTCTCTCCTTCGGCATCCAGCCCCTTCAGACATGGCCAACGAAAGACCCTGAACTAGAGTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000429629.6
ENST00000439286.5
ENST00000441134.5
ENST00000444677.5
ENST00000446764.5
ENST00000453030.5
CDS TCA 72 bp GGTATATTACATGAAGGATGGTCCTGGAGTCTCCTCTaGCCCCAGAAAGGAGCCTTCCTGGCCCCACCACTT +
Preference number: 6 (lower is better)
Translates to: GILHEGWSWSLL*PQKGAFLAPPL
Trigger: AAGTGGTGGGGCCAGGAAGGCTCCTTTCTGGGGTCAGAGGAGACTCCAGGACCATCCTTCATGTAATATACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481242.5
CDS TCA 72 bp CTCTTGTCTGTTTGTTCCCTGTGGCTCCCCTCCCCATaGGATCTAAGGCTCATGACGCAAAGGCCTGTCTGT +
Preference number: 6 (lower is better)
Translates to: LLSVCSLWLPSP*DLRLMTQRPVC
Trigger: ACAGACAGGCCTTTGCGTCATGAGCCTTAGATCTCATGGGGAGGGGAGCCACAGGGAACAAACAGACAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481242.5
CDS GCA 72 bp ATCAGTGGAAACCAGCAAGGCCTGGCCCCAGGGATCTaGACACACGGCTTCATGAGGGAAATTACTGCAGAA +
Preference number: 6 (lower is better)
Translates to: ISGNQQGLAPGI*THGFMREITAE
Trigger: TTCTGCAGTAATTTCCCTCATGAAGCCGTGTGTGCAGATCCCTGGGGCCAGGCCTTGCTGGTTTCCACTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS GCA 72 bp ATGAGATCTAAGGCTCATGACGCAAAGGCCTGTCTGTaGTGCTCACTGCTGGCCCCTCATCATCCAGATCAG +
Preference number: 6 (lower is better)
Translates to: MRSKAHDAKACL*CSLLAPHHPDQ
Trigger: CTGATCTGGATGATGAGGGGCCAGCAGTGAGCAGCACAGACAGGCCTTTGCGTCATGAGCCTTAGATCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481242.5
CDS GCA 72 bp CTAGGTCTTCCGAGACAGAGCATTTGCAAAAAGGGCTaGTATGGAACAGACTTGCAGTGCCCCGGCTCCTCA +
Preference number: 6 (lower is better)
Translates to: LGLPRQSICKKG*YGTDLQCPGSS
Trigger: TGAGGAGCCGGGGCACTGCAAGTCTGTTCCATAGCAGCCCTTTTTGCAAATGCTCTGTCTCGGAAGACCTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487565.5
CDS CCA 72 bp CCTGAATTCCTGGTGGTCTGTAAACACTGGTGGAGTTaGCAAGGGAGGGCCAAAGAGTGGTACGCTCTCTTC +
Preference number: 6 (lower is better)
Translates to: PEFLVVCKHWWS*QGRAKEWYALF
Trigger: GAAGAGAGCGTACCACTCTTTGGCCCTCCCTTGCCAACTCCACCAGTGTTTACAGACCACCAGGAATTCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
ENST00000464616.6
CDS CCA 72 bp GTGAGGACCAGTGGCCAAGAGCTCCAGCACTGGCATTaGACAGACCCGGGGGTTGTCAAATCCAAAATAATC +
Preference number: 6 (lower is better)
Translates to: VRTSGQELQHWH*TDPGVVKSKII
Trigger: GATTATTTTGGATTTGACAACCCCCGGGTCTGTCCAATGCCAGTGCTGGAGCTCTTGGCCACTGGTCCTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481242.5
CDS CCA 72 bp TCTTCCGAGACAGAGCATTTGCAAAAAGGGCTGCTATaGAACAGACTTGCAGTGCCCCGGCTCCTCACTGCA +
Preference number: 6 (lower is better)
Translates to: SSETEHLQKGLL*NRLAVPRLLTA
Trigger: TGCAGTGAGGAGCCGGGGCACTGCAAGTCTGTTCCATAGCAGCCCTTTTTGCAAATGCTCTGTCTCGGAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487565.5
CDS GCA 72 bp AGGTCATCTGGAAAAGGAAACCTGGTTACCCATCACTaGAACCCAGCCCACGCTTTCCAGAACCCACCAAAC +
Preference number: 6 (lower is better)
Translates to: RSSGKGNLVTHH*NPAHAFQNPPN
Trigger: GTTTGGTGGGTTCTGGAAAGCGTGGGCTGGGTTGCAGTGATGGGTAACCAGGTTTCCTTTTCCAGATGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481875.1
CDS GCA 72 bp GCCATAGGGTCATGTCTGCCCCACCAGCACCCACAATaGACATTGGGGGCTGGGATTATAATACAATGGAAG +
Preference number: 6 (lower is better)
Translates to: AIGSCLPHQHPQ*TLGAGIIIQWK
Trigger: CTTCCATTGTATTATAATCCCAGCCCCCAATGTGCATTGTGGGTGCTGGTGGGGCAGACATGACCCTATGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481242.5
CDS CCA 72 bp AAAGTCCCTGAATTCCTGGTGGTCTGTAAACACTGGTaGAGTTGGCAAGGGAGGGCCAAAGAGTGGTACGCT +
Preference number: 6 (lower is better)
Translates to: KVPEFLVVCKHW*SWQGRAKEWYA
Trigger: AGCGTACCACTCTTTGGCCCTCCCTTGCCAACTCCACCAGTGTTTACAGACCACCAGGAATTCAGGGACTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
ENST00000464616.6
CDS CCA 72 bp AGCCTAGGTCTTCCGAGACAGAGTTACAGGTTGACCTaGGACTCTAGTTCAGGGTCTTTCGTTGGCCATGTC +
Preference number: 6 (lower is better)
Translates to: SLGLPRQSYRLT*DSSSGSFVGHV
Trigger: GACATGGCCAACGAAAGACCCTGAACTAGAGTCCCAGGTCAACCTGTAACTCTGTCTCGGAAGACCTAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441134.5
CDS CAA 72 bp AGTGAGGACCAGTGGCCAAGAGCTCCAGCACTGGCATaGGACAGACCCGGGGGTTGTCAAATCCAAAATAAT +
Preference number: 6 (lower is better)
Translates to: SEDQWPRAPALA*DRPGGCQIQNN
Trigger: ATTATTTTGGATTTGACAACCCCCGGGTCTGTCCAATGCCAGTGCTGGAGCTCTTGGCCACTGGTCCTCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481242.5
CDS CAA 90 bp CTAACAAACTCCGCCTGGCGGGCCTCCTCTTTCTTCCGCGCTGACTaGGGTGACTCTGGTAAGACATCACTAAAAGATCGTCTATTAAGC +
Preference number: 6 (lower is better)
Translates to: LTNSAWRASSFFRAD*GDSGKTSLKDRLLS
Trigger: GCTTAATAGACGATCTTTTAGTGATGTCTTACCAGAGTCACCCAAGTCAGCGCGGAAGAAAGAGGAGGCCCGCCAGGCGGAGTTTGTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
ENST00000460176.6
CDS CAA 90 bp TTGGCCATGTCTGAAGGGGCTGGATGCCGAAGGAGAGAGACGACTTaGCTTTCCATAGAATGGTTTGTGCTATCTGACTCCCACAAGGCA +
Preference number: 6 (lower is better)
Translates to: LAMSEGAGCRRRETT*LSIEWFVLSDSHKA
Trigger: TGCCTTGTGGGAGTCAGATAGCACAAACCATTCTATGGAAAGCAAAGTCGTCTCTCTCCTTCGGCATCCAGCCCCTTCAGACATGGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000429629.6
ENST00000439286.5
ENST00000441134.5
ENST00000444677.5
ENST00000446764.5
ENST00000453030.5
CDS CAA 90 bp GTCCCTGTACATGTTAGTTTTACTTCACTATCTCAGCTAGAGGCTTaGTGCTGCACCGTGTCTGCTCTGCCAGACTGGGAGCTTCTCCAC +
Preference number: 6 (lower is better)
Translates to: VPVHVSFTSLSQLEA*CCTVSALPDWELLH
Trigger: GTGGAGAAGCTCCCAGTCTGGCAGAGCAGACACGGTGCAGCACAAAGCCTCTAGCTGAGATAGTGAAGTAAAACTAACATGTACAGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481242.5
CDS GCA 72 bp AGTTTTACTTCACTATCTCAGCTAGAGGCTTTGTGCTaGACCGTGTCTGCTCTGCCAGACTGGGAGCTTCTC +
Preference number: 6 (lower is better)
Translates to: SFTSLSQLEALC*TVSALPDWELL
Trigger: GAGAAGCTCCCAGTCTGGCAGAGCAGACACGGTGCAGCACAAAGCCTCTAGCTGAGATAGTGAAGTAAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481242.5
CDS GCA 72 bp ACAAGGTATAATGGGGCAAATGCCTCAACCAAAAGTTaGAGGAGCTCAGCAGGGAGTGACAGTGAGGACCAG +
Preference number: 6 (lower is better)
Translates to: TRYNGANASTKS*RSSAGSDSEDQ
Trigger: CTGGTCCTCACTGTCACTCCCTGCTGAGCTCCTGCAACTTTTGGTTGAGGCATTTGCCCCATTATACCTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481242.5
CDS CCA 72 bp ATAGCTGCAACAAAATTAACCCTGTTGGCCTCCACGTaGTGCAGCCTGAAGGCTTCTCCTGTGCTCTCATTC +
Preference number: 6 (lower is better)
Translates to: IAATKLTLLAST*CSLKASPVLSF
Trigger: GAATGAGAGCACAGGAGAAGCCTTCAGGCTGCACCACGTGGAGGCCAACAGGGTTAATTTTGTTGCAGCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
ENST00000478696.5
CDS CCA 72 bp TTGAATTTCACCTTCCCCCAGGGAAGAAGGAAATACTaGAGTATCTCGGCCCGGGGGTGTCTGAGGAGAATT +
Preference number: 6 (lower is better)
Translates to: LNFTFPQGRRKY*SISARGCLRRI
Trigger: AATTCTCCTCAGACACCCCCGGGCCGAGATACTCCAGTATTTCCTTCTTCCCTGGGGGAAGGTGAAATTCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000373387.9
ENST00000435213.6
ENST00000481242.5
ENST00000496711.5
ENST00000497703.1
CDS GCA 72 bp GTTAGTTTTACTTCACTATCTCAGCTAGAGGCTTTGTaGTGCACCGTGTCTGCTCTGCCAGACTGGGAGCTT +
Preference number: 6 (lower is better)
Translates to: VSFTSLSQLEAL*CTVSALPDWEL
Trigger: AAGCTCCCAGTCTGGCAGAGCAGACACGGTGCAGCACAAAGCCTCTAGCTGAGATAGTGAAGTAAAACTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481242.5
CDS CCA 72 bp TGCCGAAGGAGAGAGACGACTTTGCTTTCCATAGAATaGTTTGTGCTATCTGACTCCCACAAGGCACCTTCG +
Preference number: 6 (lower is better)
Translates to: CRRRETTLLSIE*FVLSDSHKAPS
Trigger: CGAAGGTGCCTTGTGGGAGTCAGATAGCACAAACCATTCTATGGAAAGCAAAGTCGTCTCTCTCCTTCGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000429629.6
ENST00000439286.5
ENST00000441134.5
ENST00000444677.5
ENST00000446764.5
ENST00000453030.5
CDS CCA 72 bp TTCACTTCCTCACTTGTATTCTCAACCCTTAGAGCCTaGCCTCCTGTGCTTCCAGGAAAACCACCCTTTGAG +
Preference number: 6 (lower is better)
Translates to: FTSSLVFSTLRA*PPVLPGKPPFE
Trigger: CTCAAAGGGTGGTTTTCCTGGAAGCACAGGAGGCCAGGCTCTAAGGGTTGAGAATACAAGTGAGGAAGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481242.5
CDS CCA 72 bp GTGAGGCTCAGGGTGAAGTCACTTAAGTCCCTTGACTaGTACACGCCACAGCCAACATCTGAACTAATGTTC +
Preference number: 6 (lower is better)
Translates to: VRLRVKSLKSLD*YTPQPTSELMF
Trigger: GAACATTAGTTCAGATGTTGGCTGTGGCGTGTACCAGTCAAGGGACTTAAGTGACTTCACCCTGAGCCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481242.5
CDS CAA 72 bp CATGTTAGTTTTACTTCACTATCTCAGCTAGAGGCTTaGTGCTGCACCGTGTCTGCTCTGCCAGACTGGGAG +
Preference number: 6 (lower is better)
Translates to: HVSFTSLSQLEA*CCTVSALPDWE
Trigger: CTCCCAGTCTGGCAGAGCAGACACGGTGCAGCACAAAGCCTCTAGCTGAGATAGTGAAGTAAAACTAACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481242.5
CDS CAA 90 bp GTGCAGCCTGAAGGCTTCTCCTGTGCTCTCATTCACCACATCAAATaGGTGTCGATAAGCCACACAGATGAGATTGTCACTCTCTTCAGC +
Preference number: 6 (lower is better)
Translates to: VQPEGFSCALIHHIK*VSISHTDEIVTLFS
Trigger: GCTGAAGAGAGTGACAATCTCATCTGTGTGGCTTATCGACACCAATTTGATGTGGTGAATGAGAGCACAGGAGAAGCCTTCAGGCTGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
ENST00000478696.5
ENST00000496711.5
CDS CAA 90 bp TCAGTTTCTGCATTTGAGAGGAGGGCACTCAACCTGATGGTGTCCTaGGTCCTTCTTGATTTTCAAAACTCCAGCCCTCTAAGAGCCTCC +
Preference number: 6 (lower is better)
Translates to: SVSAFERRALNLMVS*VLLDFQNSSPLRAS
Trigger: GGAGGCTCTTAGAGGGCTGGAGTTTTGAAAATCAAGAAGGACCAAGGACACCATCAGGTTGAGTGCCCTCCTCTCAAATGCAGAAACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481242.5
CDS TCA 72 bp GACGACTTTGCTTTCCATAGAATGGTTTGTGCTATCTaGCTCCCACAAGGCACCTTCGTTAACGGGTCCATC +
Preference number: 6 (lower is better)
Translates to: DDFAFHRMVCAI*LPQGTFVNGSI
Trigger: GATGGACCCGTTAACGAAGGTGCCTTGTGGGAGTCAGATAGCACAAACCATTCTATGGAAAGCAAAGTCGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000429629.6
ENST00000439286.5
ENST00000441134.5
ENST00000444677.5
ENST00000446764.5
ENST00000453030.5
CDS TCA 72 bp TTGCTTCACTGGCAGAGTTCTGTCAAACACGGGCACTaGTGGAAGGTCATCTGGAAAAGGAAACCTGGTTAC +
Preference number: 6 (lower is better)
Translates to: LLHWQSSVKHGH*WKVIWKRKPGY
Trigger: GTAACCAGGTTTCCTTTTCCAGATGACCTTCCATCAGTGCCCGTGTTTGACAGAACTCTGCCAGTGAAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481875.1
CDS CAA 72 bp AGCAACCAGAGAACTGACTCTCTGCCAGGACACTGTTaGACAGGCTCCAAGAAAGACAGCATGAGAGAAATG +
Preference number: 6 (lower is better)
Translates to: SNQRTDSLPGHC*TGSKKDSMREM
Trigger: CATTTCTCTCATGCTGTCTTTCTTGGAGCCTGTCAAACAGTGTCCTGGCAGAGAGTCAGTTCTCTGGTTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425970.5
ENST00000435213.6
CDS CAA 72 bp ATTCTCCCCAGGGCTGCAGCCCCTAGACTATGTCGTTaGTTCTCAGATGTAACTGATTCCACATCCAAGTCA +
Preference number: 6 (lower is better)
Translates to: ILPRAAAPRLCR*FSDVTDSTSKS
Trigger: TGACTTGGATGTGGAATCAGTTACATCTGAGAACAAACGACATAGTCTAGGGGCTGCAGCCCTGGGGAGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481242.5
CDS TCA 72 bp TCACCACATCAAATTGGTGTCGATAAGCCACACAGATaGGATTGTCACTCTCTTCAGCTGGCCCATCCACTA +
Preference number: 6 (lower is better)
Translates to: SPHQIGVDKPHR*DCHSLQLAHPL
Trigger: TAGTGGATGGGCCAGCTGAAGAGAGTGACAATCTCATCTGTGTGGCTTATCGACACCAATTTGATGTGGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
ENST00000478696.5
ENST00000496711.5
CDS GCA 72 bp TTGCGGGCAAAGCCAGATAGAGTGAAAGACTGCATGTaGTGGGGAATGTCTAGGCTTGATGACTCTATTCTT +
Preference number: 6 (lower is better)
Translates to: LRAKPDRVKDCM*WGMSRLDDSIL
Trigger: AAGAATAGAGTCATCAAGCCTAGACATTCCCCAGCACATGCAGTCTTTCACTCTATCTGGCTTTGCCCGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463005.1
CDS CCA 72 bp CCCCACGTCTACAGCCTAGGTCTTCCGAGACAGAGCTaGAACAAAAATGCTTCATCAGTATTATACATAGCG +
Preference number: 6 (lower is better)
Translates to: PHVYSLGLPRQS*NKNASSVLYIA
Trigger: CGCTATGTATAATACTGATGAAGCATTTTTGTTCCAGCTCTGTCTCGGAAGACCTAGGCTGTAGACGTGGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373387.9
CDS TCA 72 bp GATAGAATAAACTCATCGGATGGGCAAGTGAGTAAATaGAATCCCAGCTCCATCACTTCAGAGGCATGCGCA +
Preference number: 6 (lower is better)
Translates to: DRINSSDGQVSK*NPSSITSEACA
Trigger: TGCGCATGCCTCTGAAGTGATGGAGCTGGGATTTCATTTACTCACTTGCCCATCCGATGAGTTTATTCTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481242.5
CDS CCA 72 bp CGGGCAAAGCCAGATAGAGTGAAAGACTGCATGTGCTaGGGAATGTCTAGGCTTGATGACTCTATTCTTTTA +
Preference number: 6 (lower is better)
Translates to: RAKPDRVKDCMC*GMSRLDDSILL
Trigger: TAAAAGAATAGAGTCATCAAGCCTAGACATTCCCCAGCACATGCAGTCTTTCACTCTATCTGGCTTTGCCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463005.1
CDS CCA 72 bp ATGACATGCTCTGACCCAGGGCCTGGTACACAGAGGTaGCCATTCAGTGATGGCCACAATTATTATAATTAT +
Preference number: 6 (lower is better)
Translates to: MTCSDPGPGTQR*PFSDGHNYYNY
Trigger: ATAATTATAATAATTGTGGCCATCACTGAATGGCCACCTCTGTGTACCAGGCCCTGGGTCAGAGCATGTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481242.5
CDS CAA 90 bp TTTCATTTCTGTATAACCAGAGAGGAGAGAAGCCCTGCAGTAAACTaGAGGCAAGGGACAAAGCTGCTGAACCGGATCTTGCAATTATCT +
Preference number: 6 (lower is better)
Translates to: FHFCITREERSPAVN*RQGTKLLNRILQLS
Trigger: AGATAATTGCAAGATCCGGTTCAGCAGCTTTGTCCCTTGCCTCAAGTTTACTGCAGGGCTTCTCTCCTCTCTGGTTATACAGAAATGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487565.5
CDS CCA 72 bp ATTCTTTCTCTGTTCTTCATGTCAAGAGAGGCAGCATaGTGCAATGAAAAGGGTGTCAGAACACCTAGTTCC +
Preference number: 6 (lower is better)
Translates to: ILSLFFMSREAA*CNEKGVRTPSS
Trigger: GGAACTAGGTGTTCTGACACCCTTTTCATTGCACCATGCTGCCTCTCTTGACATGAAGAACAGAGAAAGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481242.5
ENST00000496711.5
CDS CAA 72 bp TCTGGCCACAAACCTTCTGCAAAAATCAACTACCATTaGCAAAAAGGGCTGCTATGGAACAGACTTGCAGTG +
Preference number: 6 (lower is better)
Translates to: SGHKPSAKINYH*QKGLLWNRLAV
Trigger: CACTGCAAGTCTGTTCCATAGCAGCCCTTTTTGCAAATGGTAGTTGATTTTTGCAGAAGGTTTGTGGCCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000373387.9
CDS CAA 72 bp TCAGTGATGGCCACAATTATTATAATTATGGGAGGGTaGACTGCAGTGGGAAAGGTGGAACTAGACAGGCTT +
Preference number: 6 (lower is better)
Translates to: SVMATIIIIMGG*TAVGKVELDRL
Trigger: AAGCCTGTCTAGTTCCACCTTTCCCACTGCAGTCAACCCTCCCATAATTATAATAATTGTGGCCATCACTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481242.5
CDS CAA 90 bp CCAATTTCATTGCTGAACATCTCATCATCAGTGAGCTGCCCATCTTaGGCAAAAAGAACCCCAAACTTGAAATTCACAGAGCCCTCTTGT +
Preference number: 6 (lower is better)
Translates to: PISLLNISSSVSCPS*AKRTPNLKFTEPSC
Trigger: ACAAGAGGGCTCTGTGAATTTCAAGTTTGGGGTTCTTTTTGCCAAAGATGGGCAGCTCACTGATGATGAGATGTTCAGCAATGAAATTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
ENST00000439286.5
ENST00000495172.1
CDS GCA 72 bp GATGGCCACAATTATTATAATTATGGGAGGGTTGACTaGAGTGGGAAAGGTGGAACTAGACAGGCTTTTAGT +
Preference number: 6 (lower is better)
Translates to: DGHNYYNYGRVD*SGKGGTRQAFS
Trigger: ACTAAAAGCCTGTCTAGTTCCACCTTTCCCACTGCAGTCAACCCTCCCATAATTATAATAATTGTGGCCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481242.5
CDS GCA 72 bp CCAATTTCATTGCTGAACATCTCATCATCAGTGAGCTaGCCATCTTTGGCAAAAAGAACCCCAAACTTGAAA +
Preference number: 6 (lower is better)
Translates to: PISLLNISSSVS*PSLAKRTPNLK
Trigger: TTTCAAGTTTGGGGTTCTTTTTGCCAAAGATGGGCAGCTCACTGATGATGAGATGTTCAGCAATGAAATTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
ENST00000439286.5
ENST00000495172.1
CDS CCA 72 bp TTAATTAATTTCACTAGCAAAAAGTCCCTGAATTCCTaGTGGTCTGTAAACACTGGTGGAGTTGGCAAGGGA +
Preference number: 6 (lower is better)
Translates to: LINFTSKKSLNS*WSVNTGGVGKG
Trigger: TCCCTTGCCAACTCCACCAGTGTTTACAGACCACCAGGAATTCAGGGACTTTTTGCTAGTGAAATTAATTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS TCA 72 bp AAACATGATCTCATGCCCTTGGTACACAGTATAAACTaGATGTATCCCTGTGGTATCATTTTTGGTATCCAG +
Preference number: 6 (lower is better)
Translates to: KHDLMPLVHSIN*MYPCGIIFGIQ
Trigger: CTGGATACCAAAAATGATACCACAGGGATACATTCAGTTTATACTGTGTACCAAGGGCATGAGATCATGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
ENST00000495172.1
CDS TCA 72 bp CTTTGGAATATGGCAACATGGTGGAAACATGAAACATaGTCTCATGCCCTTGGTACACAGTATAAACTGAAT +
Preference number: 6 (lower is better)
Translates to: LWNMATWWKHET*SHALGTQYKLN
Trigger: ATTCAGTTTATACTGTGTACCAAGGGCATGAGATCATGTTTCATGTTTCCACCATGTTGCCATATTCCAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
ENST00000495172.1
CDS CCA 72 bp TTAAGCATGTTCTTATGCAAATCTGGCATCAAATCCTaGTGTAAAGATCTAATCAACATATCCAGGGTACGC +
Preference number: 6 (lower is better)
Translates to: LSMFLCKSGIKS*CKDLINISRVR
Trigger: GCGTACCCTGGATATGTTGATTAGATCTTTACACCAGGATTTGATGCCAGATTTGCATAAGAACATGCTTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373386.6
ENST00000373387.9
ENST00000435213.6
CDS TCA 72 bp TTACAAGAGAGTAATTTCTTGTTCCTTAACATAGCATaGAGGAAGACGTTATGTCACACACTGATCTGTAAT +
Preference number: 6 (lower is better)
Translates to: LQESNFLFLNIA*RKTLCHTLICN
Trigger: ATTACAGATCAGTGTGTGACATAACGTCTTCCTTCATGCTATGTTAAGGAACAAGAAATTACTCTCTTGTAA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463005.1
CDS CCA 72 bp AACAAAAATGCTTCATCAGTATTATACATAGCGATCTaGCCACAAACCTTCTGCAAAAATCAACTACCATTT +
Preference number: 6 (lower is better)
Translates to: NKNASSVLYIAI*PQTFCKNQLPF
Trigger: AAATGGTAGTTGATTTTTGCAGAAGGTTTGTGGCCAGATCGCTATGTATAATACTGATGAAGCATTTTTGTT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000373387.9