RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GAREM1 (Homo sapiens)

Ensembl gene IDs: ENSG00000141441

Ensembl transcript IDs: ENST00000269209.7, ENST00000399218.8, ENST00000578619.1, ENST00000583696.1

Found 519 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCTGCCGCCTCACTGGCTGACCTTCCTATTCAAGAGGGCACTGTGTaGACCTCGGTCATGGGCTGTCCGCACATCTGGAATCTGGGGCCA +
Preference number: 1 (lower is better)
Translates to: AAASLADLPIQEGTV*TSVMGCPHIWNLGP
Trigger: TGGCCCCAGATTCCAGATGTGCGGACAGCCCATGACCGAGGTGCACACAGTGCCCTCTTGAATAGGAAGGTCAGCCAGTGAGGCGGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
3UTR TCA 90 bp ATCTCTGGGCATCACTTTTCACTGCAGAATCGCAGGGAAGGGCTGTaGAAGGGAAGGGCTTCTCGAAAGGGAAGGGCTTTCTCCTTATTA +
Preference number: 1 (lower is better)
Translates to: ISGHHFSLQNRREGL*KGRASRKGRAFSLL
Trigger: TAATAAGGAGAAAGCCCTTCCCTTTCGAGAAGCCCTTCCCTTTCACAGCCCTTCCCTGCGATTCTGCAGTGAAAAGTGATGCCCAGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
3UTR CCA 90 bp TCCCATCCCTGGACTTCTCAGGGAGCTGTATGGATAACATGCAGGTaGCTGTGGAATGTGAGCAGAGACTGTTTATGCATGTGTCTGAGA +
Preference number: 1 (lower is better)
Translates to: SHPWTSQGAVWITCR*LWNVSRDCLCMCLR
Trigger: TCTCAGACACATGCATAAACAGTCTCTGCTCACATTCCACAGCCACCTGCATGTTATCCATACAGCTCCCTGAGAAGTCCAGGGATGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
3UTR TCA 90 bp GATGAACCGGGAACTCATTCCTGCGCAGTAGCACAACCTGTCTATTaGGGCCTCAGTTACTTGCTCTGTAGATGGCAGACAAGTAGATCT +
Preference number: 1 (lower is better)
Translates to: DEPGTHSCAVAQPVY*GLSYLLCRWQTSRS
Trigger: AGATCTACTTGTCTGCCATCTACAGAGCAAGTAACTGAGGCCTCAATAGACAGGTTGTGCTACTGCGCAGGAATGAGTTCCCGGTTCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583696.1
3UTR CCA 90 bp CCCTGGACTTCTCAGGGAGCTGTATGGATAACATGCAGGTGGCTGTaGAATGTGAGCAGAGACTGTTTATGCATGTGTCTGAGAACAGTT +
Preference number: 1 (lower is better)
Translates to: PWTSQGAVWITCRWL*NVSRDCLCMCLRTV
Trigger: AACTGTTCTCAGACACATGCATAAACAGTCTCTGCTCACATTCCACAGCCACCTGCATGTTATCCATACAGCTCCCTGAGAAGTCCAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
3UTR TCA 90 bp GCCGGTGCGTCTGATTTCTCAGCTCTCGTAAAGCATGAAGTAGGTTaGGAATGCCTAATGTACTCTGACAAATGCTCTTCAGACCTCTCA +
Preference number: 1 (lower is better)
Translates to: AGASDFSALVKHEVG*ECLMYSDKCSSDLS
Trigger: TGAGAGGTCTGAAGAGCATTTGTCAGAGTACATTAGGCATTCTCAACCTACTTCATGCTTTACGAGAGCTGAGAAATCAGACGCACCGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
3UTR TCA 90 bp CACATCTGGAATCTGGGGCCAGACTCTCAGGTGCAGGGGAGTAGATaGTGCCTTGCTCTGAGAACTAATACAGTCTTAAGATGTATATTC +
Preference number: 1 (lower is better)
Translates to: HIWNLGPDSQVQGSR*CLALRTNTVLRCIF
Trigger: GAATATACATCTTAAGACTGTATTAGTTCTCAGAGCAAGGCATCATCTACTCCCCTGCACCTGAGAGTCTGGCCCCAGATTCCAGATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
3UTR TCA 90 bp TATTATCCCTGCTTTGCATATCTTGTCATGATTCTCTTGGAGCTATaGATGCTCTGTCCAGTCAGGACACCAAGGTCCTTCACAGACAGG +
Preference number: 1 (lower is better)
Translates to: YYPCFAYLVMILLEL*MLCPVRTPRSFTDR
Trigger: CCTGTCTGTGAAGGACCTTGGTGTCCTGACTGGACAGAGCATTCATAGCTCCAAGAGAATCATGACAAGATATGCAAAGCAGGGATAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
3UTR TCA 90 bp GGGAAGGGCTTTCTCCTTATTATCCCTGCTTTGCATATCTTGTCATaGTTCTCTTGGAGCTATGAATGCTCTGTCCAGTCAGGACACCAA +
Preference number: 1 (lower is better)
Translates to: GKGFLLIIPALHILS*FSWSYECSVQSGHQ
Trigger: TTGGTGTCCTGACTGGACAGAGCATTCATAGCTCCAAGAGAATCATGACAAGATATGCAAAGCAGGGATAATAAGGAGAAAGCCCTTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
3UTR TCA 90 bp ATGTCCTGTGAGTGCAGTACCAGCACTTCCTCATTGAGTTATCTGTaGCTTTTGAAGAGGTGCTCCAGTGTGAGAATTTTACAGGGTACT +
Preference number: 1 (lower is better)
Translates to: MSCECSTSTSSLSYL*LLKRCSSVRILQGT
Trigger: AGTACCCTGTAAAATTCTCACACTGGAGCACCTCTTCAAAAGTCACAGATAACTCAATGAGGAAGTGCTGGTACTGCACTCACAGGACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
3UTR GCA 90 bp TGGATAACATGCAGGTGGCTGTGGAATGTGAGCAGAGACTGTTTATaGATGTGTCTGAGAACAGTTGGAACGGACTGTCATAATATTTCC +
Preference number: 1 (lower is better)
Translates to: WITCRWLWNVSRDCL*MCLRTVGTDCHNIS
Trigger: GGAAATATTATGACAGTCCGTTCCAACTGTTCTCAGACACATGCATAAACAGTCTCTGCTCACATTCCACAGCCACCTGCATGTTATCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
3UTR TCA 90 bp TCAAGCAGCCTGGTGCCTTTAGGTAACTTGAAAGATAGTGGAAATTaGTATAAGAGGCATGTTTCTGAAAGCCCCCTACGTCCAACAACA +
Preference number: 1 (lower is better)
Translates to: SSSLVPLGNLKDSGN*YKRHVSESPLRPTT
Trigger: TGTTGTTGGACGTAGGGGGCTTTCAGAAACATGCCTCTTATATCAATTTCCACTATCTTTCAAGTTACCTAAAGGCACCAGGCTGCTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
3UTR TCA 90 bp AAGGATGCTTTCAAAACACGAAAGCTTCATAGGTCTCATGTCCTGTaGGTGCAGTACCAGCACTTCCTCATTGAGTTATCTGTGACTTTT +
Preference number: 1 (lower is better)
Translates to: KDAFKTRKLHRSHVL*VQYQHFLIELSVTF
Trigger: AAAAGTCACAGATAACTCAATGAGGAAGTGCTGGTACTGCACTCACAGGACATGAGACCTATGAAGCTTTCGTGTTTTGAAAGCATCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
3UTR TCA 90 bp TCAGTGATGAACCCAAATAAGATTGAGCTTCAAGAGACAGGGTTCTaGGAATCTTTGGAGTCATTCTGTCCACTATTCCTAAGAGAATCA +
Preference number: 1 (lower is better)
Translates to: SVMNPNKIELQETGF*ESLESFCPLFLRES
Trigger: TGATTCTCTTAGGAATAGTGGACAGAATGACTCCAAAGATTCTCAGAACCCTGTCTCTTGAAGCTCAATCTTATTTGGGTTCATCACTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
3UTR-3UTR TCA 90 bp GTCCATCCTGCAAGTTATGCTGCCGCCTCACTGGCTGACCTTCCTATTCAAGAGAAACCAGCCCTGCGGTaGGTGGGCTTAAACTCAAAC +
Preference number: 2 (lower is better)
Translates to: VHPASYAAASLADLPIQEKPALR*VGLNSN
Trigger: GTTTGAGTTTAAGCCCACTCACCGCAGGGCTGGTTT...CTCTTGAATAGGAAGGTCAGCCAGTGAGGCGGCAGCATAACTTGCAGGATGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
3UTR-3UTR TCA 90 bp GTCCATCCTGCAAGTTATGCTGCCGCCTCACTGGCTGACCTTCCTATTCAAGAGAAAGGCCGGTGCGTCTaGTTTCTCAGCTCTCGTAAA +
Preference number: 2 (lower is better)
Translates to: VHPASYAAASLADLPIQEKGRCV*FLSSRK
Trigger: TTTACGAGAGCTGAGAAATCAGACGCACCGGCCTTT...CTCTTGAATAGGAAGGTCAGCCAGTGAGGCGGCAGCATAACTTGCAGGATGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
3UTR-3UTR GCA 90 bp CCTGCAAGTTATGCTGCCGCCTCACTGGCTGACCTTCCTATTCAAGAGGGCACTATCAGTTTTGTTCCATaGTGGCCGGGGGTTATTTGG +
Preference number: 2 (lower is better)
Translates to: PASYAAASLADLPIQEGTISFVP*WPGVIW
Trigger: CCAAATAACCCCCGGCCAGCATGGAACAAAACTGAT...AGTGCCCTCTTGAATAGGAAGGTCAGCCAGTGAGGCGGCAGCATAACTTGCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
3UTR-3UTR GCA 90 bp GGAAGGGCTTCTCGAAAGGGAAGGGCTTTCTCCTTATTATCCCTGCTTTGCATAGGCCAGACTCTCAGGTaGAGGGGAGTAGATGATGCC +
Preference number: 2 (lower is better)
Translates to: GRASRKGRAFSLLSLLCIGQTLR*RGVDDA
Trigger: GGCATCATCTACTCCCCTGCACCTGAGAGTCTGGCC...TATGCAAAGCAGGGATAATAAGGAGAAAGCCCTTCCCTTTCGAGAAGCCCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
3UTR-3UTR GCA 90 bp GGAAGGGCTTCTCGAAAGGGAAGGGCTTTCTCCTTATTATCCCTGCTTTGCATACAAGAGGGCACTGTGTaGACCTCGGTCATGGGCTGT +
Preference number: 2 (lower is better)
Translates to: GRASRKGRAFSLLSLLCIQEGTV*TSVMGC
Trigger: ACAGCCCATGACCGAGGTGCACACAGTGCCCTCTTG...TATGCAAAGCAGGGATAATAAGGAGAAAGCCCTTCCCTTTCGAGAAGCCCTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
3UTR-3UTR CCA 90 bp GGAAGGGCTTCTCGAAAGGGAAGGGCTTTCTCCTTATTATCCCTGCTTTGCATATGTGCACCTCGGTCATaGGCTGTCCGCACATCTGGA +
Preference number: 2 (lower is better)
Translates to: GRASRKGRAFSLLSLLCICAPRS*AVRTSG
Trigger: TCCAGATGTGCGGACAGCCCATGACCGAGGTGCACA...TATGCAAAGCAGGGATAATAAGGAGAAAGCCCTTCCCTTTCGAGAAGCCCTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
3UTR-3UTR GCA 90 bp GTCCATCCTGCAAGTTATGCTGCCGCCTCACTGGCTGACCTTCCTATTCAAGAGCATGGGAGTATTACATaGAAAAACCAGCCCTGCGGT +
Preference number: 2 (lower is better)
Translates to: VHPASYAAASLADLPIQEHGSIT*KNQPCG
Trigger: ACCGCAGGGCTGGTTTTTGCATGTAATACTCCCATG...CTCTTGAATAGGAAGGTCAGCCAGTGAGGCGGCAGCATAACTTGCAGGATGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
3UTR-3UTR CCA 90 bp GATAGACACTTCCTCTCTTTTGATTACAGGGGACCTGCCAGAGGAGATAAGATGCGCACATCTGGAATCTaGGGCCAGACTCTCAGGTGC +
Preference number: 2 (lower is better)
Translates to: DRHFLSFDYRGPARGDKMRTSGI*GQTLRC
Trigger: GCACCTGAGAGTCTGGCCCCAGATTCCAGATGTGCG...CATCTTATCTCCTCTGGCAGGTCCCCTGTAATCAAAAGAGAGGAAGTGTCTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
3UTR-3UTR CCA 90 bp GATAGACACTTCCTCTCTTTTGATTACAGGGGACCTGCCAGAGGAGATAAGATGGGCTGTCCGCACATCTaGAATCTGGGGCCAGACTCT +
Preference number: 2 (lower is better)
Translates to: DRHFLSFDYRGPARGDKMGCPHI*NLGPDS
Trigger: AGAGTCTGGCCCCAGATTCCAGATGTGCGGACAGCC...CATCTTATCTCCTCTGGCAGGTCCCCTGTAATCAAAAGAGAGGAAGTGTCTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
3UTR-3UTR TCA 90 bp CCTGCAAGTTATGCTGCCGCCTCACTGGCTGACCTTCCTATTCAAGAGGGCACTTTTAGTGCAAAAACATaGAATTGTGTCCCAGCCCAC +
Preference number: 2 (lower is better)
Translates to: PASYAAASLADLPIQEGTFSAKT*NCVPAH
Trigger: GTGGGCTGGGACACAATTTCATGTTTTTGCACTAAA...AGTGCCCTCTTGAATAGGAAGGTCAGCCAGTGAGGCGGCAGCATAACTTGCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
3UTR-3UTR TCA 90 bp GTCCATCCTGCAAGTTATGCTGCCGCCTCACTGGCTGACCTTCCTATTCAAGAGCAAGAGACAGGGTTCTaGGAATCTTTGGAGTCATTC +
Preference number: 2 (lower is better)
Translates to: VHPASYAAASLADLPIQEQETGF*ESLESF
Trigger: GAATGACTCCAAAGATTCTCAGAACCCTGTCTCTTG...CTCTTGAATAGGAAGGTCAGCCAGTGAGGCGGCAGCATAACTTGCAGGATGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
3UTR-3UTR TCA 90 bp CCTGCAAGTTATGCTGCCGCCTCACTGGCTGACCTTCCTATTCAAGAGGGCACTATGCCTAATGTACTCTaGCAAATGCTCTTCAGACCT +
Preference number: 2 (lower is better)
Translates to: PASYAAASLADLPIQEGTMPNVL*QMLFRP
Trigger: AGGTCTGAAGAGCATTTGTCAGAGTACATTAGGCAT...AGTGCCCTCTTGAATAGGAAGGTCAGCCAGTGAGGCGGCAGCATAACTTGCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
3UTR-3UTR TCA 90 bp GGAAGGGCTTCTCGAAAGGGAAGGGCTTTCTCCTTATTATCCCTGCTTTGCATAAGGTCTCATGTCCTGTaGGTGCAGTACCAGCACTTC +
Preference number: 2 (lower is better)
Translates to: GRASRKGRAFSLLSLLCIRSHVL*VQYQHF
Trigger: GAAGTGCTGGTACTGCACTCACAGGACATGAGACCT...TATGCAAAGCAGGGATAATAAGGAGAAAGCCCTTCCCTTTCGAGAAGCCCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
3UTR-3UTR GCA 90 bp TCCCTGCTTTGCATATCTTGTCATGATTCTCTTGGAGCTATGAATGCTCTGTCCCAAGAGGGCACTGTGTaGACCTCGGTCATGGGCTGT +
Preference number: 2 (lower is better)
Translates to: SLLCISCHDSLGAMNALSQEGTV*TSVMGC
Trigger: ACAGCCCATGACCGAGGTGCACACAGTGCCCTCTTG...GGACAGAGCATTCATAGCTCCAAGAGAATCATGACAAGATATGCAAAGCAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
3UTR-3UTR GCA 90 bp TCCCTGCTTTGCATATCTTGTCATGATTCTCTTGGAGCTATGAATGCTCTGTCCAAAGGCCACAGTCCCTaGCCTCAAGGAGTCTCTGCG +
Preference number: 2 (lower is better)
Translates to: SLLCISCHDSLGAMNALSKGHSP*PQGVSA
Trigger: CGCAGAGACTCCTTGAGGGCAGGGACTGTGGCCTTT...GGACAGAGCATTCATAGCTCCAAGAGAATCATGACAAGATATGCAAAGCAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
3UTR-3UTR CCA 90 bp GGAAGGGCTTCTCGAAAGGGAAGGGCTTTCTCCTTATTATCCCTGCTTTGCATAATGCTGCCGCCTCACTaGCTGACCTTCCTATTCAAG +
Preference number: 2 (lower is better)
Translates to: GRASRKGRAFSLLSLLCIMLPPH*LTFLFK
Trigger: CTTGAATAGGAAGGTCAGCCAGTGAGGCGGCAGCAT...TATGCAAAGCAGGGATAATAAGGAGAAAGCCCTTCCCTTTCGAGAAGCCCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
3UTR-3UTR TCA 90 bp GATAGACACTTCCTCTCTTTTGATTACAGGGGACCTGCCAGAGGAGATAAGATGAGGTCTCATGTCCTGTaGGTGCAGTACCAGCACTTC +
Preference number: 2 (lower is better)
Translates to: DRHFLSFDYRGPARGDKMRSHVL*VQYQHF
Trigger: GAAGTGCTGGTACTGCACTCACAGGACATGAGACCT...CATCTTATCTCCTCTGGCAGGTCCCCTGTAATCAAAAGAGAGGAAGTGTCTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
3UTR-3UTR TCA 90 bp TTAGCTGAATGGGCAGTTCACTGCAACTTCATAAACTGCAATGATATATGTGGGCGCAGGGAAGGGCTGTaGAAGGGAAGGGCTTCTCGA +
Preference number: 2 (lower is better)
Translates to: LAEWAVHCNFINCNDICGRREGL*KGRASR
Trigger: TCGAGAAGCCCTTCCCTTTCACAGCCCTTCCCTGCG...CCCACATATATCATTGCAGTTTATGAAGTTGCAGTGAACTGCCCATTCAGCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
3UTR-3UTR GCA 90 bp GTCCATCCTGCAAGTTATGCTGCCGCCTCACTGGCTGACCTTCCTATTCAAGAGATGTACTCTGACAAATaGTCTTCAGACCTCTCACCA +
Preference number: 2 (lower is better)
Translates to: VHPASYAAASLADLPIQEMYSDK*SSDLSP
Trigger: TGGTGAGAGGTCTGAAGAGCATTTGTCAGAGTACAT...CTCTTGAATAGGAAGGTCAGCCAGTGAGGCGGCAGCATAACTTGCAGGATGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
3UTR-3UTR GCA 90 bp CTGCTTTGCATATCTTGTCATGATTCTCTTGGAGCTATGAATGCTCTGTCCAGTAAAGGCCACAGTCCCTaGCCTCAAGGAGTCTCTGCG +
Preference number: 2 (lower is better)
Translates to: LLCISCHDSLGAMNALSSKGHSP*PQGVSA
Trigger: CGCAGAGACTCCTTGAGGGCAGGGACTGTGGCCTTT...ACTGGACAGAGCATTCATAGCTCCAAGAGAATCATGACAAGATATGCAAAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
3UTR-3UTR CCA 90 bp CTGCTTTGCATATCTTGTCATGATTCTCTTGGAGCTATGAATGCTCTGTCCAGTCGCACATCTGGAATCTaGGGCCAGACTCTCAGGTGC +
Preference number: 2 (lower is better)
Translates to: LLCISCHDSLGAMNALSSRTSGI*GQTLRC
Trigger: GCACCTGAGAGTCTGGCCCCAGATTCCAGATGTGCG...ACTGGACAGAGCATTCATAGCTCCAAGAGAATCATGACAAGATATGCAAAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
3UTR-3UTR GCA 90 bp GGAAGGGCTTCTCGAAAGGGAAGGGCTTTCTCCTTATTATCCCTGCTTTGCATAATCAGTTTTGTTCCATaGTGGCCGGGGGTTATTTGG +
Preference number: 2 (lower is better)
Translates to: GRASRKGRAFSLLSLLCIISFVP*WPGVIW
Trigger: CCAAATAACCCCCGGCCAGCATGGAACAAAACTGAT...TATGCAAAGCAGGGATAATAAGGAGAAAGCCCTTCCCTTTCGAGAAGCCCTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
3UTR-3UTR GCA 90 bp GGAAGGGCTTCTCGAAAGGGAAGGGCTTTCTCCTTATTATCCCTGCTTTGCATATCTTGGAGCTATGAATaGTCTGTCCAGTCAGGACAC +
Preference number: 2 (lower is better)
Translates to: GRASRKGRAFSLLSLLCISWSYE*SVQSGH
Trigger: GTGTCCTGACTGGACAGAGCATTCATAGCTCCAAGA...TATGCAAAGCAGGGATAATAAGGAGAAAGCCCTTCCCTTTCGAGAAGCCCTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
3UTR-3UTR GCA 90 bp TCCCTGCTTTGCATATCTTGTCATGATTCTCTTGGAGCTATGAATGCTCTGTCCCTCATGTCCTGTGAGTaGAGTACCAGCACTTCCTCA +
Preference number: 2 (lower is better)
Translates to: SLLCISCHDSLGAMNALSLMSCE*STSTSS
Trigger: TGAGGAAGTGCTGGTACTGCACTCACAGGACATGAG...GGACAGAGCATTCATAGCTCCAAGAGAATCATGACAAGATATGCAAAGCAGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
3UTR-3UTR TCA 90 bp TCCCTGCTTTGCATATCTTGTCATGATTCTCTTGGAGCTATGAATGCTCTGTCCAGAGGTGCTCCAGTGTaGGAATTTTACAGGGTACTC +
Preference number: 2 (lower is better)
Translates to: SLLCISCHDSLGAMNALSRGAPV*EFYRVL
Trigger: GAGTACCCTGTAAAATTCTCACACTGGAGCACCTCT...GGACAGAGCATTCATAGCTCCAAGAGAATCATGACAAGATATGCAAAGCAGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
3UTR-3UTR TCA 90 bp TTAGCTGAATGGGCAGTTCACTGCAACTTCATAAACTGCAATGATATATGTGGGCTGCTGAGTGTTTGTTaGGTGACGTACAAGGCACAC +
Preference number: 2 (lower is better)
Translates to: LAEWAVHCNFINCNDICGLLSVC*VTYKAH
Trigger: GTGTGCCTTGTACGTCACTCAACAAACACTCAGCAG...CCCACATATATCATTGCAGTTTATGAAGTTGCAGTGAACTGCCCATTCAGCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
3UTR-3UTR TCA 90 bp AAGAGAAAACTTGCAAGATTGATCTGTGAGTGTCTGAATTCTGCCTCCCAACATCTGCTGAGTGTTTGTTaGGTGACGTACAAGGCACAC +
Preference number: 2 (lower is better)
Translates to: KRKLARLICECLNSASQHLLSVC*VTYKAH
Trigger: GTGTGCCTTGTACGTCACTCAACAAACACTCAGCAG...ATGTTGGGAGGCAGAATTCAGACACTCACAGATCAATCTTGCAAGTTTTCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
3UTR-3UTR TCA 90 bp TCCCTGCTTTGCATATCTTGTCATGATTCTCTTGGAGCTATGAATGCTCTGTCCTTTAGTGCAAAAACATaGAATTGTGTCCCAGCCCAC +
Preference number: 2 (lower is better)
Translates to: SLLCISCHDSLGAMNALSFSAKT*NCVPAH
Trigger: GTGGGCTGGGACACAATTTCATGTTTTTGCACTAAA...GGACAGAGCATTCATAGCTCCAAGAGAATCATGACAAGATATGCAAAGCAGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
3UTR-3UTR TCA 90 bp TTAGCTGAATGGGCAGTTCACTGCAACTTCATAAACTGCAATGATATATGTGGGTTCTGCCTCCCAACATaGGTCAGGTCCACATTATAC +
Preference number: 2 (lower is better)
Translates to: LAEWAVHCNFINCNDICGFCLPT*VRSTLY
Trigger: GTATAATGTGGACCTGACTCATGTTGGGAGGCAGAA...CCCACATATATCATTGCAGTTTATGAAGTTGCAGTGAACTGCCCATTCAGCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
3UTR-3UTR GCA 90 bp AAGAGAAAACTTGCAAGATTGATCTGTGAGTGTCTGAATTCTGCCTCCCAACATCATGGGAGTATTACATaGAAAAACCAGCCCTGCGGT +
Preference number: 2 (lower is better)
Translates to: KRKLARLICECLNSASQHHGSIT*KNQPCG
Trigger: ACCGCAGGGCTGGTTTTTGCATGTAATACTCCCATG...ATGTTGGGAGGCAGAATTCAGACACTCACAGATCAATCTTGCAAGTTTTCTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
3UTR-3UTR GCA 90 bp AAGAGAAAACTTGCAAGATTGATCTGTGAGTGTCTGAATTCTGCCTCCCAACATGATATAAGTCCATCCTaGAAGTTATGCTGCCGCCTC +
Preference number: 2 (lower is better)
Translates to: KRKLARLICECLNSASQHDISPS*KLCCRL
Trigger: GAGGCGGCAGCATAACTTGCAGGATGGACTTATATC...ATGTTGGGAGGCAGAATTCAGACACTCACAGATCAATCTTGCAAGTTTTCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
3UTR-3UTR CCA 90 bp CTCACCATCAGACACCAGGGGAAGGAGACCCTTAAACCGGAGAATTATAATTCAGGTTCTGAGAATCTTTaGAGTCATTCTGTCCACTAT +
Preference number: 2 (lower is better)
Translates to: LTIRHQGKETLKPENYNSGSENL*SHSVHY
Trigger: ATAGTGGACAGAATGACTCCAAAGATTCTCAGAACC...TGAATTATAATTCTCCGGTTTAAGGGTCTCCTTCCCCTGGTGTCTGATGGTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
3UTR-3UTR TCA 90 bp CTGCTTTGCATATCTTGTCATGATTCTCTTGGAGCTATGAATGCTCTGTCCAGTTCATTGAGTTATCTGTaGCTTTTGAAGAGGTGCTCC +
Preference number: 2 (lower is better)
Translates to: LLCISCHDSLGAMNALSSSLSYL*LLKRCS
Trigger: GGAGCACCTCTTCAAAAGTCACAGATAACTCAATGA...ACTGGACAGAGCATTCATAGCTCCAAGAGAATCATGACAAGATATGCAAAGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
3UTR-3UTR TCA 90 bp CTGCTTTGCATATCTTGTCATGATTCTCTTGGAGCTATGAATGCTCTGTCCAGTAACAACACTAGGCAATaGGAGAGATACTTTCTGCCT +
Preference number: 2 (lower is better)
Translates to: LLCISCHDSLGAMNALSSNNTRQ*ERYFLP
Trigger: AGGCAGAAAGTATCTCTCTCATTGCCTAGTGTTGTT...ACTGGACAGAGCATTCATAGCTCCAAGAGAATCATGACAAGATATGCAAAGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
3UTR-3UTR TCA 90 bp TGGGGCATTATCAGTAAGGTAGATTTTTGTCAACAAAGGATTGATGACTGTGAAGCACAACCTGTCTATTaGGGCCTCAGTTACTTGCTC +
Preference number: 2 (lower is better)
Translates to: WGIISKVDFCQQRIDDCEAQPVY*GLSYLL
Trigger: GAGCAAGTAACTGAGGCCTCAATAGACAGGTTGTGC...TTCACAGTCATCAATCCTTTGTTGACAAAAATCTACCTTACTGATAATGCCCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583696.1
3UTR-3UTR TCA 90 bp TTAGCTGAATGGGCAGTTCACTGCAACTTCATAAACTGCAATGATATATGTGGGAAGAAGCAATCTGAATaGCAGAGCACAGAACACAGT +
Preference number: 2 (lower is better)
Translates to: LAEWAVHCNFINCNDICGKKQSE*QSTEHS
Trigger: ACTGTGTTCTGTGCTCTGTCATTCAGATTGCTTCTT...CCCACATATATCATTGCAGTTTATGAAGTTGCAGTGAACTGCCCATTCAGCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
3UTR-3UTR TCA 90 bp TTAGCTGAATGGGCAGTTCACTGCAACTTCATAAACTGCAATGATATATGTGGGTCATTGAGTTATCTGTaGCTTTTGAAGAGGTGCTCC +
Preference number: 2 (lower is better)
Translates to: LAEWAVHCNFINCNDICGSLSYL*LLKRCS
Trigger: GGAGCACCTCTTCAAAAGTCACAGATAACTCAATGA...CCCACATATATCATTGCAGTTTATGAAGTTGCAGTGAACTGCCCATTCAGCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
3UTR-3UTR TCA 90 bp TTAGCTGAATGGGCAGTTCACTGCAACTTCATAAACTGCAATGATATATGTGGGAACAACACTAGGCAATaGGAGAGATACTTTCTGCCT +
Preference number: 2 (lower is better)
Translates to: LAEWAVHCNFINCNDICGNNTRQ*ERYFLP
Trigger: AGGCAGAAAGTATCTCTCTCATTGCCTAGTGTTGTT...CCCACATATATCATTGCAGTTTATGAAGTTGCAGTGAACTGCCCATTCAGCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
3UTR-3UTR TCA 90 bp AAGAGAAAACTTGCAAGATTGATCTGTGAGTGTCTGAATTCTGCCTCCCAACATAAGCATGAAGTAGGTTaGGAATGCCTAATGTACTCT +
Preference number: 2 (lower is better)
Translates to: KRKLARLICECLNSASQHKHEVG*ECLMYS
Trigger: AGAGTACATTAGGCATTCTCAACCTACTTCATGCTT...ATGTTGGGAGGCAGAATTCAGACACTCACAGATCAATCTTGCAAGTTTTCTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
3UTR-3UTR TCA 90 bp TTTGGTTGGGGCATTATCAGTAAGGTAGATTTTTGTCAACAAAGGATTGATGACGGGAGATGCATAGTGTaGGGTAATATAGCACAGTCT +
Preference number: 2 (lower is better)
Translates to: FGWGIISKVDFCQQRIDDGRCIV*GNIAQS
Trigger: AGACTGTGCTATATTACCTCACACTATGCATCTCCC...GTCATCAATCCTTTGTTGACAAAAATCTACCTTACTGATAATGCCCCAACCAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583696.1
3UTR-3UTR TCA 90 bp AAGAGAAAACTTGCAAGATTGATCTGTGAGTGTCTGAATTCTGCCTCCCAACATTTGCATATCTTGTCATaGTTCTCTTGGAGCTATGAA +
Preference number: 2 (lower is better)
Translates to: KRKLARLICECLNSASQHLHILS*FSWSYE
Trigger: TTCATAGCTCCAAGAGAATCATGACAAGATATGCAA...ATGTTGGGAGGCAGAATTCAGACACTCACAGATCAATCTTGCAAGTTTTCTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
3UTR-3UTR CCA 90 bp AAGAGAAAACTTGCAAGATTGATCTGTGAGTGTCTGAATTCTGCCTCCCAACATACAAAACTAGACTGGTaGGTCTTGTCTTTCAATTTA +
Preference number: 2 (lower is better)
Translates to: KRKLARLICECLNSASQHTKLDW*VLSFNL
Trigger: TAAATTGAAAGACAAGACCCACCAGTCTAGTTTTGT...ATGTTGGGAGGCAGAATTCAGACACTCACAGATCAATCTTGCAAGTTTTCTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
3UTR CCA 72 bp ACTGTGTGCACCTCGGTCATGGGCTGTCCGCACATCTaGAATCTGGGGCCAGACTCTCAGGTGCAGGGGAGT +
Preference number: 3 (lower is better)
Translates to: TVCTSVMGCPHI*NLGPDSQVQGS
Trigger: ACTCCCCTGCACCTGAGAGTCTGGCCCCAGATTCCAGATGTGCGGACAGCCCATGACCGAGGTGCACACAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
3UTR TCA 72 bp AGTCCATCCTGCAAGTTATGCTGCCGCCTCACTGGCTaGCCTTCCTATTCAAGAGGGCACTGTGTGCACCTC +
Preference number: 3 (lower is better)
Translates to: SPSCKLCCRLTG*PSYSRGHCVHL
Trigger: GAGGTGCACACAGTGCCCTCTTGAATAGGAAGGTCAGCCAGTGAGGCGGCAGCATAACTTGCAGGATGGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
3UTR GCA 72 bp TCACTGGCTGACCTTCCTATTCAAGAGGGCACTGTGTaGACCTCGGTCATGGGCTGTCCGCACATCTGGAAT +
Preference number: 3 (lower is better)
Translates to: SLADLPIQEGTV*TSVMGCPHIWN
Trigger: ATTCCAGATGTGCGGACAGCCCATGACCGAGGTGCACACAGTGCCCTCTTGAATAGGAAGGTCAGCCAGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
3UTR-3UTR CAA 90 bp GTCCATCCTGCAAGTTATGCTGCCGCCTCACTGGCTGACCTTCCTATTCAAGAGGCAGCTGCTGAGTGTTaGTTGAGTGACGTACAAGGC +
Preference number: 3 (lower is better)
Translates to: VHPASYAAASLADLPIQEAAAEC*LSDVQG
Trigger: GCCTTGTACGTCACTCAACAAACACTCAGCAGCTGC...CTCTTGAATAGGAAGGTCAGCCAGTGAGGCGGCAGCATAACTTGCAGGATGGAC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
3UTR CCA 72 bp ACCTGGCTGGTTAGAAGGGTTCTGTGTGTGGATCTCTaGGCATCACTTTTCACTGCAGAATCGCAGGGAAGG +
Preference number: 3 (lower is better)
Translates to: TWLVRRVLCVDL*ASLFTAESQGR
Trigger: CCTTCCCTGCGATTCTGCAGTGAAAAGTGATGCCCAGAGATCCACACACAGAACCCTTCTAACCAGCCAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
3UTR-3UTR CAA 90 bp CCTGCAAGTTATGCTGCCGCCTCACTGGCTGACCTTCCTATTCAAGAGGGCACTCTTCTAGCACACGCATaGATCAGTTTTGTTCCATGC +
Preference number: 3 (lower is better)
Translates to: PASYAAASLADLPIQEGTLLAHA*ISFVPC
Trigger: GCATGGAACAAAACTGATCAATGCGTGTGCTAGAAG...AGTGCCCTCTTGAATAGGAAGGTCAGCCAGTGAGGCGGCAGCATAACTTGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
3UTR TCA 72 bp GGAACTCATTCCTGCGCAGTAGCACAACCTGTCTATTaGGGCCTCAGTTACTTGCTCTGTAGATGGCAGACA +
Preference number: 3 (lower is better)
Translates to: GTHSCAVAQPVY*GLSYLLCRWQT
Trigger: TGTCTGCCATCTACAGAGCAAGTAACTGAGGCCTCAATAGACAGGTTGTGCTACTGCGCAGGAATGAGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583696.1
3UTR-3UTR CAA 90 bp GTCCATCCTGCAAGTTATGCTGCCGCCTCACTGGCTGACCTTCCTATTCAAGAGACATATCCGGGTGTATaGTGTATGCACCTATACATG +
Preference number: 3 (lower is better)
Translates to: VHPASYAAASLADLPIQETYPGV*CMHLYM
Trigger: CATGTATAGGTGCATACACAATACACCCGGATATGT...CTCTTGAATAGGAAGGTCAGCCAGTGAGGCGGCAGCATAACTTGCAGGATGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
3UTR-3UTR CAA 90 bp GGAAGGGCTTCTCGAAAGGGAAGGGCTTTCTCCTTATTATCCCTGCTTTGCATATCCTTCTTCCTGAGTTaGAGAATTGTGTCCGAGTGC +
Preference number: 3 (lower is better)
Translates to: GRASRKGRAFSLLSLLCISFFLS*RIVSEC
Trigger: GCACTCGGACACAATTCTCAAACTCAGGAAGAAGGA...TATGCAAAGCAGGGATAATAAGGAGAAAGCCCTTCCCTTTCGAGAAGCCCTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
3UTR-3UTR CAA 90 bp AAGAGAAAACTTGCAAGATTGATCTGTGAGTGTCTGAATTCTGCCTCCCAACATGCAGCTGCTGAGTGTTaGTTGAGTGACGTACAAGGC +
Preference number: 3 (lower is better)
Translates to: KRKLARLICECLNSASQHAAAEC*LSDVQG
Trigger: GCCTTGTACGTCACTCAACAAACACTCAGCAGCTGC...ATGTTGGGAGGCAGAATTCAGACACTCACAGATCAATCTTGCAAGTTTTCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
3UTR-3UTR CAA 90 bp GGAAGGGCTTCTCGAAAGGGAAGGGCTTTCTCCTTATTATCCCTGCTTTGCATAACATATCCGGGTGTATaGTGTATGCACCTATACATG +
Preference number: 3 (lower is better)
Translates to: GRASRKGRAFSLLSLLCITYPGV*CMHLYM
Trigger: CATGTATAGGTGCATACACAATACACCCGGATATGT...TATGCAAAGCAGGGATAATAAGGAGAAAGCCCTTCCCTTTCGAGAAGCCCTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
3UTR-3UTR CAA 90 bp GGAAGGGCTTCTCGAAAGGGAAGGGCTTTCTCCTTATTATCCCTGCTTTGCATACAAGGAGTCTCTGCGTaGCCAATCAATATAAACTTG +
Preference number: 3 (lower is better)
Translates to: GRASRKGRAFSLLSLLCIQGVSA*PININL
Trigger: CAAGTTTATATTGATTGGCAACGCAGAGACTCCTTG...TATGCAAAGCAGGGATAATAAGGAGAAAGCCCTTCCCTTTCGAGAAGCCCTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
3UTR-3UTR CAA 90 bp TTAGCTGAATGGGCAGTTCACTGCAACTTCATAAACTGCAATGATATATGTGGGGCTGCTGAGTGTTTGTaGAGTGACGTACAAGGCACA +
Preference number: 3 (lower is better)
Translates to: LAEWAVHCNFINCNDICGAAECL*SDVQGT
Trigger: TGTGCCTTGTACGTCACTCAACAAACACTCAGCAGC...CCCACATATATCATTGCAGTTTATGAAGTTGCAGTGAACTGCCCATTCAGCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
3UTR-3UTR CAA 90 bp AAGAGAAAACTTGCAAGATTGATCTGTGAGTGTCTGAATTCTGCCTCCCAACATGCTGCTGAGTGTTTGTaGAGTGACGTACAAGGCACA +
Preference number: 3 (lower is better)
Translates to: KRKLARLICECLNSASQHAAECL*SDVQGT
Trigger: TGTGCCTTGTACGTCACTCAACAAACACTCAGCAGC...ATGTTGGGAGGCAGAATTCAGACACTCACAGATCAATCTTGCAAGTTTTCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
3UTR-3UTR CAA 90 bp CTGCTTTGCATATCTTGTCATGATTCTCTTGGAGCTATGAATGCTCTGTCCAGTCGGATTCAGCTAGGTTaGCCAATGAAAACTTGCAGC +
Preference number: 3 (lower is better)
Translates to: LLCISCHDSLGAMNALSSRIQLG*PMKTCS
Trigger: GCTGCAAGTTTTCATTGGCAAACCTAGCTGAATCCG...ACTGGACAGAGCATTCATAGCTCCAAGAGAATCATGACAAGATATGCAAAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
3UTR-3UTR CAA 90 bp AAGAGAAAACTTGCAAGATTGATCTGTGAGTGTCTGAATTCTGCCTCCCAACATCGGATTCAGCTAGGTTaGCCAATGAAAACTTGCAGC +
Preference number: 3 (lower is better)
Translates to: KRKLARLICECLNSASQHRIQLG*PMKTCS
Trigger: GCTGCAAGTTTTCATTGGCAAACCTAGCTGAATCCG...ATGTTGGGAGGCAGAATTCAGACACTCACAGATCAATCTTGCAAGTTTTCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
3UTR TCA 72 bp GAGTGCAGTACCAGCACTTCCTCATTGAGTTATCTGTaGCTTTTGAAGAGGTGCTCCAGTGTGAGAATTTTA +
Preference number: 3 (lower is better)
Translates to: ECSTSTSSLSYL*LLKRCSSVRIL
Trigger: TAAAATTCTCACACTGGAGCACCTCTTCAAAAGTCACAGATAACTCAATGAGGAAGTGCTGGTACTGCACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
3UTR TCA 72 bp TTCAAAACACGAAAGCTTCATAGGTCTCATGTCCTGTaGGTGCAGTACCAGCACTTCCTCATTGAGTTATCT +
Preference number: 3 (lower is better)
Translates to: FKTRKLHRSHVL*VQYQHFLIELS
Trigger: AGATAACTCAATGAGGAAGTGCTGGTACTGCACTCACAGGACATGAGACCTATGAAGCTTTCGTGTTTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
3UTR-3UTR CAA 90 bp AAGAGAAAACTTGCAAGATTGATCTGTGAGTGTCTGAATTCTGCCTCCCAACATCTTCTAGCACACGCATaGATCAGTTTTGTTCCATGC +
Preference number: 3 (lower is better)
Translates to: KRKLARLICECLNSASQHLLAHA*ISFVPC
Trigger: GCATGGAACAAAACTGATCAATGCGTGTGCTAGAAG...ATGTTGGGAGGCAGAATTCAGACACTCACAGATCAATCTTGCAAGTTTTCTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
3UTR TCA 72 bp TCATGGGAGTATTACATGCAAAAACCAGCCCTGCGGTaGGTGGGCTTAAACTCAAACTTAATTCTTCAATAC +
Preference number: 3 (lower is better)
Translates to: SWEYYMQKPALR*VGLNSNLILQY
Trigger: GTATTGAAGAATTAAGTTTGAGTTTAAGCCCACTCACCGCAGGGCTGGTTTTTGCATGTAATACTCCCATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
3UTR-3UTR CAA 90 bp CACCAAGCATACAACATTAAAGTGTCAATTCGTATCACTAACATTTTCAGGCACTGCAAAAACATGAAATaGTGTCCCAGCCCACCCCTT +
Preference number: 3 (lower is better)
Translates to: HQAYNIKVSIRITNIFRHCKNMK*CPSPPL
Trigger: AAGGGGTGGGCTGGGACACAATTTCATGTTTTTGCA...GTGCCTGAAAATGTTAGTGATACGAATTGACACTTTAATGTTGTATGCTTGGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
3UTR-3UTR CAA 90 bp TTAGCTGAATGGGCAGTTCACTGCAACTTCATAAACTGCAATGATATATGTGGGCAAGGAGTCTCTGCGTaGCCAATCAATATAAACTTG +
Preference number: 3 (lower is better)
Translates to: LAEWAVHCNFINCNDICGQGVSA*PININL
Trigger: CAAGTTTATATTGATTGGCAACGCAGAGACTCCTTG...CCCACATATATCATTGCAGTTTATGAAGTTGCAGTGAACTGCCCATTCAGCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
3UTR TCA 72 bp AACCCAAATAAGATTGAGCTTCAAGAGACAGGGTTCTaGGAATCTTTGGAGTCATTCTGTCCACTATTCCTA +
Preference number: 3 (lower is better)
Translates to: NPNKIELQETGF*ESLESFCPLFL
Trigger: TAGGAATAGTGGACAGAATGACTCCAAAGATTCTCAGAACCCTGTCTCTTGAAGCTCAATCTTATTTGGGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
3UTR TCA 72 bp TCTGATTTCTCAGCTCTCGTAAAGCATGAAGTAGGTTaGGAATGCCTAATGTACTCTGACAAATGCTCTTCA +
Preference number: 3 (lower is better)
Translates to: SDFSALVKHEVG*ECLMYSDKCSS
Trigger: TGAAGAGCATTTGTCAGAGTACATTAGGCATTCTCAACCTACTTCATGCTTTACGAGAGCTGAGAAATCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
3UTR TCA 72 bp TTTCTCCTTATTATCCCTGCTTTGCATATCTTGTCATaGTTCTCTTGGAGCTATGAATGCTCTGTCCAGTCA +
Preference number: 3 (lower is better)
Translates to: FLLIIPALHILS*FSWSYECSVQS
Trigger: TGACTGGACAGAGCATTCATAGCTCCAAGAGAATCATGACAAGATATGCAAAGCAGGGATAATAAGGAGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
3UTR GCA 72 bp AAAACAACAACACTAGGCAATGAGAGAGATACTTTCTaGCTCCAACACATTCCAAGTTTTAGTGATCTTGGG +
Preference number: 3 (lower is better)
Translates to: KTTTLGNERDTF*LQHIPSFSDLG
Trigger: CCCAAGATCACTAAAACTTGGAATGTGTTGGAGGCAGAAAGTATCTCTCTCATTGCCTAGTGTTGTTGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
3UTR-3UTR CAA 90 bp AAGAGAAAACTTGCAAGATTGATCTGTGAGTGTCTGAATTCTGCCTCCCAACATGCTTGGCTTGGTTTATaGCTGATTTTCTTTTCTGAT +
Preference number: 3 (lower is better)
Translates to: KRKLARLICECLNSASQHAWLGL*LIFFSD
Trigger: ATCAGAAAAGAAAATCAGCAATAAACCAAGCCAAGC...ATGTTGGGAGGCAGAATTCAGACACTCACAGATCAATCTTGCAAGTTTTCTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
3UTR TCA 72 bp CACCAAGTTTTAAAGACTGAACAGTGTGATTTAACATaGTGTAACCATGAGAATCCCGTATTATTACAATCC +
Preference number: 3 (lower is better)
Translates to: HQVLKTEQCDLT*CNHENPVLLQS
Trigger: GGATTGTAATAATACGGGATTCTCATGGTTACATCATGTTAAATCACACTGTTCAGTCTTTAAAACTTGGTG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR GCA 90 bp CCTGCAAGTTATGCTGCCGCCTCACTGGCTGACCTTCCTATTCAAGAGGGCACTCTGGGGCGCCCCGCGTaGCCTCACGCCCGGAGAAGA +
Preference number: 4 (lower is better)
Translates to: PASYAAASLADLPIQEGTLGRPA*PHARRR
Trigger: TCTTCTCCGGGCGTGAGGGCACGCGGGGCGCCCCAG...AGTGCCCTCTTGAATAGGAAGGTCAGCCAGTGAGGCGGCAGCATAACTTGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269209.7
CDS-3UTR TCA 90 bp CCTGCAAGTTATGCTGCCGCCTCACTGGCTGACCTTCCTATTCAAGAGGGCACTGGTGGAAGGACTGGGTaGGCTCATCGCGGGCGTAGC +
Preference number: 4 (lower is better)
Translates to: PASYAAASLADLPIQEGTGGRTG*AHRGRS
Trigger: GCTACGCCCGCGATGAGCTCACCCAGTCCTTCCACC...AGTGCCCTCTTGAATAGGAAGGTCAGCCAGTGAGGCGGCAGCATAACTTGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR TCA 90 bp GTCCATCCTGCAAGTTATGCTGCCGCCTCACTGGCTGACCTTCCTATTCAAGAGGCAGCCGGTAAGTGCTaGCCAGGAGGTCGAGCGGCA +
Preference number: 4 (lower is better)
Translates to: VHPASYAAASLADLPIQEAAGKC*PGGRAA
Trigger: TGCCGCTCGACCTCCTGGTCAGCACTTACCGGCTGC...CTCTTGAATAGGAAGGTCAGCCAGTGAGGCGGCAGCATAACTTGCAGGATGGAC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CCA 90 bp GTCCATCCTGCAAGTTATGCTGCCGCCTCACTGGCTGACCTTCCTATTCAAGAGTCGGGGTGGAACAGGTaGGGCGTTCAGGAGCCGGCA +
Preference number: 4 (lower is better)
Translates to: VHPASYAAASLADLPIQESGWNR*GVQEPA
Trigger: TGCCGGCTCCTGAACGCCCCACCTGTTCCACCCCGA...CTCTTGAATAGGAAGGTCAGCCAGTGAGGCGGCAGCATAACTTGCAGGATGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CCA 90 bp CCTGCAAGTTATGCTGCCGCCTCACTGGCTGACCTTCCTATTCAAGAGGGCACTAGCAGGTGGCTGCCATaGGGAACCGTCGCCACAGGA +
Preference number: 4 (lower is better)
Translates to: PASYAAASLADLPIQEGTSRWLP*GTVATG
Trigger: TCCTGTGGCGACGGTTCCCCATGGCAGCCACCTGCT...AGTGCCCTCTTGAATAGGAAGGTCAGCCAGTGAGGCGGCAGCATAACTTGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR TCA 90 bp GTCCATCCTGCAAGTTATGCTGCCGCCTCACTGGCTGACCTTCCTATTCAAGAGCATCGCGGGCGTAGCTaGGCGAATTGGGCACGTGGT +
Preference number: 4 (lower is better)
Translates to: VHPASYAAASLADLPIQEHRGRS*ANWARG
Trigger: ACCACGTGCCCAATTCGCTCAGCTACGCCCGCGATG...CTCTTGAATAGGAAGGTCAGCCAGTGAGGCGGCAGCATAACTTGCAGGATGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR TCA 90 bp GTCCATCCTGCAAGTTATGCTGCCGCCTCACTGGCTGACCTTCCTATTCAAGAGCGCTCAGAGAGCGAGTaGGAGGCTGATGGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: VHPASYAAASLADLPIQERSESE*EADGWA
Trigger: AGCCCAGCCATCAGCCTCTCACTCGCTCTCTGAGCG...CTCTTGAATAGGAAGGTCAGCCAGTGAGGCGGCAGCATAACTTGCAGGATGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR GCA 90 bp GTCCATCCTGCAAGTTATGCTGCCGCCTCACTGGCTGACCTTCCTATTCAAGAGAGGTCAGCAGGTGGCTaGCATGGGGAACCGTCGCCA +
Preference number: 4 (lower is better)
Translates to: VHPASYAAASLADLPIQERSAGG*HGEPSP
Trigger: TGGCGACGGTTCCCCATGGCAGCCACCTGCTGACCT...CTCTTGAATAGGAAGGTCAGCCAGTGAGGCGGCAGCATAACTTGCAGGATGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CCA 90 bp GGAAGGGCTTCTCGAAAGGGAAGGGCTTTCTCCTTATTATCCCTGCTTTGCATACTCCTCCTCTGGCCCTaGGTCTGCAGCTGCGGCGGC +
Preference number: 4 (lower is better)
Translates to: GRASRKGRAFSLLSLLCILLLWP*VCSCGG
Trigger: GCCGCCGCAGCTGCAGACCCAGGGCCAGAGGAGGAG...TATGCAAAGCAGGGATAATAAGGAGAAAGCCCTTCCCTTTCGAGAAGCCCTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269209.7
CDS-3UTR TCA 90 bp CTCACCATCAGACACCAGGGGAAGGAGACCCTTAAACCGGAGAATTATAATTCATCCGCCTCGAGCGTGTaGGGAGGAGCCGCGGGTCTG +
Preference number: 4 (lower is better)
Translates to: LTIRHQGKETLKPENYNSSASSV*GGAAGL
Trigger: CAGACCCGCGGCTCCTCCTCACACGCTCGAGGCGGA...TGAATTATAATTCTCCGGTTTAAGGGTCTCCTTCCCCTGGTGTCTGATGGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269209.7
CDS-3UTR CCA 90 bp CCTGCAAGTTATGCTGCCGCCTCACTGGCTGACCTTCCTATTCAAGAGGGCACTTGTGCACCTCGGTCATaGGCTGTCCGCACATCTGGA +
Preference number: 4 (lower is better)
Translates to: PASYAAASLADLPIQEGTCAPRS*AVRTSG
Trigger: TCCAGATGTGCGGACAGCCCATGACCGAGGTGCACA...AGTGCCCTCTTGAATAGGAAGGTCAGCCAGTGAGGCGGCAGCATAACTTGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CCA 90 bp CCTGCAAGTTATGCTGCCGCCTCACTGGCTGACCTTCCTATTCAAGAGGGCACTCCCACCTCCCATCCCTaGACTTCTCAGGGAGCTGTA +
Preference number: 4 (lower is better)
Translates to: PASYAAASLADLPIQEGTPTSHP*TSQGAV
Trigger: TACAGCTCCCTGAGAAGTCCAGGGATGGGAGGTGGG...AGTGCCCTCTTGAATAGGAAGGTCAGCCAGTGAGGCGGCAGCATAACTTGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR TCA 90 bp GGAAGGGCTTCTCGAAAGGGAAGGGCTTTCTCCTTATTATCCCTGCTTTGCATAGTTGCCGCGCTGGCTTaGCTGTGCGAGGAGGGATGG +
Preference number: 4 (lower is better)
Translates to: GRASRKGRAFSLLSLLCIVAALA*LCEEGW
Trigger: CCATCCCTCCTCGCACAGTCAAGCCAGCGCGGCAAC...TATGCAAAGCAGGGATAATAAGGAGAAAGCCCTTCCCTTTCGAGAAGCCCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR GCA 90 bp GTCCATCCTGCAAGTTATGCTGCCGCCTCACTGGCTGACCTTCCTATTCAAGAGCAAGAGGGCACTGTGTaGACCTCGGTCATGGGCTGT +
Preference number: 4 (lower is better)
Translates to: VHPASYAAASLADLPIQEQEGTV*TSVMGC
Trigger: ACAGCCCATGACCGAGGTGCACACAGTGCCCTCTTG...CTCTTGAATAGGAAGGTCAGCCAGTGAGGCGGCAGCATAACTTGCAGGATGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CCA 90 bp CCTGCAAGTTATGCTGCCGCCTCACTGGCTGACCTTCCTATTCAAGAGGGCACTCTTCACCAGGTGTTCTaGGAGGCTGAACTTGGGGAC +
Preference number: 4 (lower is better)
Translates to: PASYAAASLADLPIQEGTLHQVF*EAELGD
Trigger: GTCCCCAAGTTCAGCCTCCCAGAACACCTGGTGAAG...AGTGCCCTCTTGAATAGGAAGGTCAGCCAGTGAGGCGGCAGCATAACTTGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CCA 90 bp GTCCATCCTGCAAGTTATGCTGCCGCCTCACTGGCTGACCTTCCTATTCAAGAGCTGTGCGAGGAGGGATaGAGGGACTGGTGGACAAAG +
Preference number: 4 (lower is better)
Translates to: VHPASYAAASLADLPIQELCEEG*RDWWTK
Trigger: CTTTGTCCACCAGTCCCTCCATCCCTCCTCGCACAG...CTCTTGAATAGGAAGGTCAGCCAGTGAGGCGGCAGCATAACTTGCAGGATGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR TCA 90 bp CTCACCATCAGACACCAGGGGAAGGAGACCCTTAAACCGGAGAATTATAATTCACCAAGCTGTGGGCAGTaGTGGTGGTCCACTGGCGGC +
Preference number: 4 (lower is better)
Translates to: LTIRHQGKETLKPENYNSPSCGQ*WWSTGG
Trigger: GCCGCCAGTGGACCACCATCACTGCCCACAGCTTGG...TGAATTATAATTCTCCGGTTTAAGGGTCTCCTTCCCCTGGTGTCTGATGGTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR TCA 90 bp CTCACCATCAGACACCAGGGGAAGGAGACCCTTAAACCGGAGAATTATAATTCAGGTGGAAGGACTGGGTaGGCTCATCGCGGGCGTAGC +
Preference number: 4 (lower is better)
Translates to: LTIRHQGKETLKPENYNSGGRTG*AHRGRS
Trigger: GCTACGCCCGCGATGAGCTCACCCAGTCCTTCCACC...TGAATTATAATTCTCCGGTTTAAGGGTCTCCTTCCCCTGGTGTCTGATGGTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR TCA 90 bp GTGCAAAAACATGAAATTGTGTCCCAGCCCACCCCTTCTAGCACACGCATTGATGAGCGAGTGAGAGGCTaGTGGCTGGGCTTGCCTTCC +
Preference number: 4 (lower is better)
Translates to: VQKHEIVSQPTPSSTRIDERVRG*WLGLPS
Trigger: GGAAGGCAAGCCCAGCCATCAGCCTCTCACTCGCTC...ATCAATGCGTGTGCTAGAAGGGGTGGGCTGGGACACAATTTCATGTTTTTGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CCA 90 bp GTCCATCCTGCAAGTTATGCTGCCGCCTCACTGGCTGACCTTCCTATTCAAGAGGTATGGGTTTCTCGGTaGAGGGCTTGGCACAGTCAC +
Preference number: 4 (lower is better)
Translates to: VHPASYAAASLADLPIQEVWVSR*RAWHSH
Trigger: GTGACTGTGCCAAGCCCTCCACCGAGAAACCCATAC...CTCTTGAATAGGAAGGTCAGCCAGTGAGGCGGCAGCATAACTTGCAGGATGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CCA 90 bp GGAAGGGCTTCTCGAAAGGGAAGGGCTTTCTCCTTATTATCCCTGCTTTGCATAAGTCGGTGGAAGGACTaGGTGAGCTCATCGCGGGCG +
Preference number: 4 (lower is better)
Translates to: GRASRKGRAFSLLSLLCISRWKD*VSSSRA
Trigger: CGCCCGCGATGAGCTCACCCAGTCCTTCCACCGACT...TATGCAAAGCAGGGATAATAAGGAGAAAGCCCTTCCCTTTCGAGAAGCCCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CCA 90 bp CTCACCATCAGACACCAGGGGAAGGAGACCCTTAAACCGGAGAATTATAATTCATCGGGGTGGAACAGGTaGGGCGTTCAGGAGCCGGCA +
Preference number: 4 (lower is better)
Translates to: LTIRHQGKETLKPENYNSSGWNR*GVQEPA
Trigger: TGCCGGCTCCTGAACGCCCCACCTGTTCCACCCCGA...TGAATTATAATTCTCCGGTTTAAGGGTCTCCTTCCCCTGGTGTCTGATGGTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CCA 90 bp CCTGCAAGTTATGCTGCCGCCTCACTGGCTGACCTTCCTATTCAAGAGGGCACTAATAGTAGGACAAGGTaGGGCTGGGAGAGCGAGTCT +
Preference number: 4 (lower is better)
Translates to: PASYAAASLADLPIQEGTNSRTR*GWESES
Trigger: AGACTCGCTCTCCCAGCCCCACCTTGTCCTACTATT...AGTGCCCTCTTGAATAGGAAGGTCAGCCAGTGAGGCGGCAGCATAACTTGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CCA 90 bp CCTGCAAGTTATGCTGCCGCCTCACTGGCTGACCTTCCTATTCAAGAGGGCACTGCAGGAAGTCACTCCTaGTCTGGCTTTCTGATGCTC +
Preference number: 4 (lower is better)
Translates to: PASYAAASLADLPIQEGTAGSHS*SGFLML
Trigger: GAGCATCAGAAAGCCAGACCAGGAGTGACTTCCTGC...AGTGCCCTCTTGAATAGGAAGGTCAGCCAGTGAGGCGGCAGCATAACTTGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR TCA 90 bp TCCCTGCTTTGCATATCTTGTCATGATTCTCTTGGAGCTATGAATGCTCTGTCCGCAGCCGGTAAGTGCTaGCCAGGAGGTCGAGCGGCA +
Preference number: 4 (lower is better)
Translates to: SLLCISCHDSLGAMNALSAAGKC*PGGRAA
Trigger: TGCCGCTCGACCTCCTGGTCAGCACTTACCGGCTGC...GGACAGAGCATTCATAGCTCCAAGAGAATCATGACAAGATATGCAAAGCAGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR TCA 90 bp TCCCTGCTTTGCATATCTTGTCATGATTCTCTTGGAGCTATGAATGCTCTGTCCCCAAGCTGTGGGCAGTaGTGGTGGTCCACTGGCGGC +
Preference number: 4 (lower is better)
Translates to: SLLCISCHDSLGAMNALSPSCGQ*WWSTGG
Trigger: GCCGCCAGTGGACCACCATCACTGCCCACAGCTTGG...GGACAGAGCATTCATAGCTCCAAGAGAATCATGACAAGATATGCAAAGCAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR TCA 90 bp GTCCATCCTGCAAGTTATGCTGCCGCCTCACTGGCTGACCTTCCTATTCAAGAGAGGTCCCTGCAACCATaGAGGTTCACCTCACTGTTG +
Preference number: 4 (lower is better)
Translates to: VHPASYAAASLADLPIQERSLQP*RFTSLL
Trigger: CAACAGTGAGGTGAACCTTCATGGTTGCAGGGACCT...CTCTTGAATAGGAAGGTCAGCCAGTGAGGCGGCAGCATAACTTGCAGGATGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR TCA 90 bp GGAAGGGCTTCTCGAAAGGGAAGGGCTTTCTCCTTATTATCCCTGCTTTGCATACGCAGGGAAGGGCTGTaGAAGGGAAGGGCTTCTCGA +
Preference number: 4 (lower is better)
Translates to: GRASRKGRAFSLLSLLCIRREGL*KGRASR
Trigger: TCGAGAAGCCCTTCCCTTTCACAGCCCTTCCCTGCG...TATGCAAAGCAGGGATAATAAGGAGAAAGCCCTTCCCTTTCGAGAAGCCCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR GCA 90 bp CCTGCAAGTTATGCTGCCGCCTCACTGGCTGACCTTCCTATTCAAGAGGGCACTCTCATGTCCTGTGAGTaGAGTACCAGCACTTCCTCA +
Preference number: 4 (lower is better)
Translates to: PASYAAASLADLPIQEGTLMSCE*STSTSS
Trigger: TGAGGAAGTGCTGGTACTGCACTCACAGGACATGAG...AGTGCCCTCTTGAATAGGAAGGTCAGCCAGTGAGGCGGCAGCATAACTTGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR GCA 90 bp GTCCATCCTGCAAGTTATGCTGCCGCCTCACTGGCTGACCTTCCTATTCAAGAGGGCATCACTTTTCACTaGAGAATCGCAGGGAAGGGC +
Preference number: 4 (lower is better)
Translates to: VHPASYAAASLADLPIQEGITFH*RIAGKG
Trigger: GCCCTTCCCTGCGATTCTGCAGTGAAAAGTGATGCC...CTCTTGAATAGGAAGGTCAGCCAGTGAGGCGGCAGCATAACTTGCAGGATGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CCA 90 bp GTCCATCCTGCAAGTTATGCTGCCGCCTCACTGGCTGACCTTCCTATTCAAGAGCCACAATGTTGCGGATaGTGTGTTCGCCCTCTTGCA +
Preference number: 4 (lower is better)
Translates to: VHPASYAAASLADLPIQEPQCCG*CVRPLA
Trigger: TGCAAGAGGGCGAACACACCATCCGCAACATTGTGG...CTCTTGAATAGGAAGGTCAGCCAGTGAGGCGGCAGCATAACTTGCAGGATGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CCA 90 bp GGAAGGGCTTCTCGAAAGGGAAGGGCTTTCTCCTTATTATCCCTGCTTTGCATATTGGGCACGTGGTTGTaGCCAGAGCACCGACCCTTC +
Preference number: 4 (lower is better)
Translates to: GRASRKGRAFSLLSLLCILGTWL*PEHRPF
Trigger: GAAGGGTCGGTGCTCTGGCCACAACCACGTGCCCAA...TATGCAAAGCAGGGATAATAAGGAGAAAGCCCTTCCCTTTCGAGAAGCCCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CCA 90 bp GATAGACACTTCCTCTCTTTTGATTACAGGGGACCTGCCAGAGGAGATAAGATGAGTCGGTGGAAGGACTaGGTGAGCTCATCGCGGGCG +
Preference number: 4 (lower is better)
Translates to: DRHFLSFDYRGPARGDKMSRWKD*VSSSRA
Trigger: CGCCCGCGATGAGCTCACCCAGTCCTTCCACCGACT...CATCTTATCTCCTCTGGCAGGTCCCCTGTAATCAAAAGAGAGGAAGTGTCTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CCA 90 bp CCTGCAAGTTATGCTGCCGCCTCACTGGCTGACCTTCCTATTCAAGAGGGCACTTCTCAGGGAGCTGTATaGATAACATGCAGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: PASYAAASLADLPIQEGTSQGAV*ITCRWL
Trigger: CAGCCACCTGCATGTTATCCATACAGCTCCCTGAGA...AGTGCCCTCTTGAATAGGAAGGTCAGCCAGTGAGGCGGCAGCATAACTTGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR TCA 90 bp GTCCATCCTGCAAGTTATGCTGCCGCCTCACTGGCTGACCTTCCTATTCAAGAGCTATCTTTGGCCCAATaGCATAGTGACCCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: VHPASYAAASLADLPIQELSLAQ*HSDPPP
Trigger: TGGAGGAGGGTCACTATGTCATTGGGCCAAAGATAG...CTCTTGAATAGGAAGGTCAGCCAGTGAGGCGGCAGCATAACTTGCAGGATGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR TCA 90 bp GATAGACACTTCCTCTCTTTTGATTACAGGGGACCTGCCAGAGGAGATAAGATGGGTGCCCCTCACGGATaGAGTGGAGGTCGTATGGGT +
Preference number: 4 (lower is better)
Translates to: DRHFLSFDYRGPARGDKMGAPHG*SGGRMG
Trigger: ACCCATACGACCTCCACTTCATCCGTGAGGGGCACC...CATCTTATCTCCTCTGGCAGGTCCCCTGTAATCAAAAGAGAGGAAGTGTCTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR TCA 90 bp GTCCATCCTGCAAGTTATGCTGCCGCCTCACTGGCTGACCTTCCTATTCAAGAGATCACGGACAGCCCGTaGATACTCATCGATGTCGAA +
Preference number: 4 (lower is better)
Translates to: VHPASYAAASLADLPIQEITDSP*ILIDVE
Trigger: TTCGACATCGATGAGTATTCACGGGCTGTCCGTGAT...CTCTTGAATAGGAAGGTCAGCCAGTGAGGCGGCAGCATAACTTGCAGGATGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR TCA 90 bp TCCCTGCTTTGCATATCTTGTCATGATTCTCTTGGAGCTATGAATGCTCTGTCCCGCTCAGAGAGCGAGTaGGAGGCTGATGGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: SLLCISCHDSLGAMNALSRSESE*EADGWA
Trigger: AGCCCAGCCATCAGCCTCTCACTCGCTCTCTGAGCG...GGACAGAGCATTCATAGCTCCAAGAGAATCATGACAAGATATGCAAAGCAGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR TCA 90 bp GTGCAAAAACATGAAATTGTGTCCCAGCCCACCCCTTCTAGCACACGCATTGATTGCCGCCTCACTGGCTaGCCTTCCTATTCAAGAGGG +
Preference number: 4 (lower is better)
Translates to: VQKHEIVSQPTPSSTRIDCRLTG*PSYSRG
Trigger: CCCTCTTGAATAGGAAGGTCAGCCAGTGAGGCGGCA...ATCAATGCGTGTGCTAGAAGGGGTGGGCTGGGACACAATTTCATGTTTTTGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR TCA 90 bp CCTGCAAGTTATGCTGCCGCCTCACTGGCTGACCTTCCTATTCAAGAGGGCACTTTCTGCCTCCCAACATaGGTCAGGTCCACATTATAC +
Preference number: 4 (lower is better)
Translates to: PASYAAASLADLPIQEGTFCLPT*VRSTLY
Trigger: GTATAATGTGGACCTGACTCATGTTGGGAGGCAGAA...AGTGCCCTCTTGAATAGGAAGGTCAGCCAGTGAGGCGGCAGCATAACTTGCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR GCA 90 bp CCTGCAAGTTATGCTGCCGCCTCACTGGCTGACCTTCCTATTCAAGAGGGCACTTGCCATGGAGATTGTTaGCATACACACAGACCGAGA +
Preference number: 4 (lower is better)
Translates to: PASYAAASLADLPIQEGTCHGDC*HTHRPR
Trigger: TCTCGGTCTGTGTGTATGGCAACAATCTCCATGGCA...AGTGCCCTCTTGAATAGGAAGGTCAGCCAGTGAGGCGGCAGCATAACTTGCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR GCA 90 bp GATAGACACTTCCTCTCTTTTGATTACAGGGGACCTGCCAGAGGAGATAAGATGGGAGAGCGAGTCTGTTaGCGCGCTGGCTTGACTGTG +
Preference number: 4 (lower is better)
Translates to: DRHFLSFDYRGPARGDKMGERVC*RAGLTV
Trigger: CACAGTCAAGCCAGCGCGGCAACAGACTCGCTCTCC...CATCTTATCTCCTCTGGCAGGTCCCCTGTAATCAAAAGAGAGGAAGTGTCTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR GCA 90 bp GTGCAAAAACATGAAATTGTGTCCCAGCCCACCCCTTCTAGCACACGCATTGATAAAGGCCACAGTCCCTaGCCTCAAGGAGTCTCTGCG +
Preference number: 4 (lower is better)
Translates to: VQKHEIVSQPTPSSTRIDKGHSP*PQGVSA
Trigger: CGCAGAGACTCCTTGAGGGCAGGGACTGTGGCCTTT...ATCAATGCGTGTGCTAGAAGGGGTGGGCTGGGACACAATTTCATGTTTTTGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CCA 90 bp CTCACCATCAGACACCAGGGGAAGGAGACCCTTAAACCGGAGAATTATAATTCATTGGGCACGTGGTTGTaGCCAGAGCACCGACCCTTC +
Preference number: 4 (lower is better)
Translates to: LTIRHQGKETLKPENYNSLGTWL*PEHRPF
Trigger: GAAGGGTCGGTGCTCTGGCCACAACCACGTGCCCAA...TGAATTATAATTCTCCGGTTTAAGGGTCTCCTTCCCCTGGTGTCTGATGGTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CCA 90 bp GATAGACACTTCCTCTCTTTTGATTACAGGGGACCTGCCAGAGGAGATAAGATGCTTTGCGCTTCGGGGTaGAACAGGTGGGGCGTTCAG +
Preference number: 4 (lower is better)
Translates to: DRHFLSFDYRGPARGDKMLCASG*NRWGVQ
Trigger: CTGAACGCCCCACCTGTTCCACCCCGAAGCGCAAAG...CATCTTATCTCCTCTGGCAGGTCCCCTGTAATCAAAAGAGAGGAAGTGTCTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CCA 90 bp CTCACCATCAGACACCAGGGGAAGGAGACCCTTAAACCGGAGAATTATAATTCAAGTCTGTTGCCGCGCTaGCTTGACTGTGCGAGGAGG +
Preference number: 4 (lower is better)
Translates to: LTIRHQGKETLKPENYNSSLLPR*LDCARR
Trigger: CCTCCTCGCACAGTCAAGCCAGCGCGGCAACAGACT...TGAATTATAATTCTCCGGTTTAAGGGTCTCCTTCCCCTGGTGTCTGATGGTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CCA 90 bp CTCACCATCAGACACCAGGGGAAGGAGACCCTTAAACCGGAGAATTATAATTCAGATCTGGGGGCCAGCTaGAGATGGAGCGGAGATGAG +
Preference number: 4 (lower is better)
Translates to: LTIRHQGKETLKPENYNSDLGAS*RWSGDE
Trigger: CTCATCTCCGCTCCATCTCCAGCTGGCCCCCAGATC...TGAATTATAATTCTCCGGTTTAAGGGTCTCCTTCCCCTGGTGTCTGATGGTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CCA 90 bp TCCCTGCTTTGCATATCTTGTCATGATTCTCTTGGAGCTATGAATGCTCTGTCCAGCAGGTGGCTGCCATaGGGAACCGTCGCCACAGGA +
Preference number: 4 (lower is better)
Translates to: SLLCISCHDSLGAMNALSSRWLP*GTVATG
Trigger: TCCTGTGGCGACGGTTCCCCATGGCAGCCACCTGCT...GGACAGAGCATTCATAGCTCCAAGAGAATCATGACAAGATATGCAAAGCAGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CCA 90 bp GTCCATCCTGCAAGTTATGCTGCCGCCTCACTGGCTGACCTTCCTATTCAAGAGTGGCCGGGGGTTATTTaGCTATATTTTGGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: VHPASYAAASLADLPIQEWPGVI*LYFGPP
Trigger: TGGAGGCCCAAAATATAGCCAAATAACCCCCGGCCA...CTCTTGAATAGGAAGGTCAGCCAGTGAGGCGGCAGCATAACTTGCAGGATGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CCA 90 bp GGAAGGGCTTCTCGAAAGGGAAGGGCTTTCTCCTTATTATCCCTGCTTTGCATAGGCTGTCCGCACATCTaGAATCTGGGGCCAGACTCT +
Preference number: 4 (lower is better)
Translates to: GRASRKGRAFSLLSLLCIGCPHI*NLGPDS
Trigger: AGAGTCTGGCCCCAGATTCCAGATGTGCGGACAGCC...TATGCAAAGCAGGGATAATAAGGAGAAAGCCCTTCCCTTTCGAGAAGCCCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CCA 90 bp ATTGAGGCCTCAGTTACTTGCTCTGTAGATGGCAGACAAGTAGATCTAGTCAGGGCCGAGGCGAGCGGATaGCTTGAGCTCAGGACTTTG +
Preference number: 4 (lower is better)
Translates to: IEASVTCSVDGRQVDLVRAEASG*LELRTL
Trigger: CAAAGTCCTGAGCTCAAGCCATCCGCTCGCCTCGGC...CCTGACTAGATCTACTTGTCTGCCATCTACAGAGCAAGTAACTGAGGCCTCAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583696.1
CDS-3UTR TCA 90 bp GTGCAAAAACATGAAATTGTGTCCCAGCCCACCCCTTCTAGCACACGCATTGATGGTGTTCTGGGAGGCTaGACTTGGGGACAGTCAAGT +
Preference number: 4 (lower is better)
Translates to: VQKHEIVSQPTPSSTRIDGVLGG*TWGQSS
Trigger: ACTTGACTGTCCCCAAGTTCAGCCTCCCAGAACACC...ATCAATGCGTGTGCTAGAAGGGGTGGGCTGGGACACAATTTCATGTTTTTGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR TCA 90 bp CTCACCATCAGACACCAGGGGAAGGAGACCCTTAAACCGGAGAATTATAATTCACAGATACCTAGCCAGTaGTGGACCAGGGTTTCGGGC +
Preference number: 4 (lower is better)
Translates to: LTIRHQGKETLKPENYNSQIPSQ*WTRVSG
Trigger: GCCCGAAACCCTGGTCCATCACTGGCTAGGTATCTG...TGAATTATAATTCTCCGGTTTAAGGGTCTCCTTCCCCTGGTGTCTGATGGTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR TCA 90 bp GGAAGGGCTTCTCGAAAGGGAAGGGCTTTCTCCTTATTATCCCTGCTTTGCATATCCCGGGATGCCTGCTaGTTCTTCACTAGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: GRASRKGRAFSLLSLLCISRDAC*FFTSFW
Trigger: CCAGAAGCTAGTGAAGAATCAGCAGGCATCCCGGGA...TATGCAAAGCAGGGATAATAAGGAGAAAGCCCTTCCCTTTCGAGAAGCCCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR TCA 90 bp GTGCAAAAACATGAAATTGTGTCCCAGCCCACCCCTTCTAGCACACGCATTGATTTCGTAGGGAAGTTCTaGCTTTCCCGGGATGCCTGC +
Preference number: 4 (lower is better)
Translates to: VQKHEIVSQPTPSSTRIDFVGKF*LSRDAC
Trigger: GCAGGCATCCCGGGAAAGTCAGAACTTCCCTACGAA...ATCAATGCGTGTGCTAGAAGGGGTGGGCTGGGACACAATTTCATGTTTTTGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR TCA 90 bp AAGAGAAAACTTGCAAGATTGATCTGTGAGTGTCTGAATTCTGCCTCCCAACATGTTGCCGCGCTGGCTTaGCTGTGCGAGGAGGGATGG +
Preference number: 4 (lower is better)
Translates to: KRKLARLICECLNSASQHVAALA*LCEEGW
Trigger: CCATCCCTCCTCGCACAGTCAAGCCAGCGCGGCAAC...ATGTTGGGAGGCAGAATTCAGACACTCACAGATCAATCTTGCAAGTTTTCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR TCA 90 bp GATAGACACTTCCTCTCTTTTGATTACAGGGGACCTGCCAGAGGAGATAAGATGCTCCGAGAGATCTGGTaGCCCAGACTTGGGGTCTTC +
Preference number: 4 (lower is better)
Translates to: DRHFLSFDYRGPARGDKMLREIW*PRLGVF
Trigger: GAAGACCCCAAGTCTGGGTCACCAGATCTCTCGGAG...CATCTTATCTCCTCTGGCAGGTCCCCTGTAATCAAAAGAGAGGAAGTGTCTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR TCA 90 bp CCTGCAAGTTATGCTGCCGCCTCACTGGCTGACCTTCCTATTCAAGAGGGCACTCCCCTTAATAGAGGCTaGCGTTTTAAAGACAGGACA +
Preference number: 4 (lower is better)
Translates to: PASYAAASLADLPIQEGTPLNRG*RFKDRT
Trigger: TGTCCTGTCTTTAAAACGTCAGCCTCTATTAAGGGG...AGTGCCCTCTTGAATAGGAAGGTCAGCCAGTGAGGCGGCAGCATAACTTGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR TCA 90 bp TCCCTGCTTTGCATATCTTGTCATGATTCTCTTGGAGCTATGAATGCTCTGTCCCGCAGGGAAGGGCTGTaGAAGGGAAGGGCTTCTCGA +
Preference number: 4 (lower is better)
Translates to: SLLCISCHDSLGAMNALSRREGL*KGRASR
Trigger: TCGAGAAGCCCTTCCCTTTCACAGCCCTTCCCTGCG...GGACAGAGCATTCATAGCTCCAAGAGAATCATGACAAGATATGCAAAGCAGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR GCA 90 bp CTCACCATCAGACACCAGGGGAAGGAGACCCTTAAACCGGAGAATTATAATTCAGGCCAGACTCTCAGGTaGAGGGGAGTAGATGATGCC +
Preference number: 4 (lower is better)
Translates to: LTIRHQGKETLKPENYNSGQTLR*RGVDDA
Trigger: GGCATCATCTACTCCCCTGCACCTGAGAGTCTGGCC...TGAATTATAATTCTCCGGTTTAAGGGTCTCCTTCCCCTGGTGTCTGATGGTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR GCA 90 bp GATAGACACTTCCTCTCTTTTGATTACAGGGGACCTGCCAGAGGAGATAAGATGCAAGAGGGCACTGTGTaGACCTCGGTCATGGGCTGT +
Preference number: 4 (lower is better)
Translates to: DRHFLSFDYRGPARGDKMQEGTV*TSVMGC
Trigger: ACAGCCCATGACCGAGGTGCACACAGTGCCCTCTTG...CATCTTATCTCCTCTGGCAGGTCCCCTGTAATCAAAAGAGAGGAAGTGTCTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR GCA 90 bp GTCCATCCTGCAAGTTATGCTGCCGCCTCACTGGCTGACCTTCCTATTCAAGAGTCTTGGAGCTATGAATaGTCTGTCCAGTCAGGACAC +
Preference number: 4 (lower is better)
Translates to: VHPASYAAASLADLPIQESWSYE*SVQSGH
Trigger: GTGTCCTGACTGGACAGAGCATTCATAGCTCCAAGA...CTCTTGAATAGGAAGGTCAGCCAGTGAGGCGGCAGCATAACTTGCAGGATGGAC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR GCA 90 bp GTCCATCCTGCAAGTTATGCTGCCGCCTCACTGGCTGACCTTCCTATTCAAGAGGCTGTATGGATAACATaGAGGTGGCTGTGGAATGTG +
Preference number: 4 (lower is better)
Translates to: VHPASYAAASLADLPIQEAVWIT*RWLWNV
Trigger: CACATTCCACAGCCACCTGCATGTTATCCATACAGC...CTCTTGAATAGGAAGGTCAGCCAGTGAGGCGGCAGCATAACTTGCAGGATGGAC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR GCA 90 bp GTCCATCCTGCAAGTTATGCTGCCGCCTCACTGGCTGACCTTCCTATTCAAGAGGCCTTTTATTCTTCTTaGTCAAGCAGCCTGGTGCCT +
Preference number: 4 (lower is better)
Translates to: VHPASYAAASLADLPIQEAFYSS*SSSLVP
Trigger: AGGCACCAGGCTGCTTGAGCAAGAAGAATAAAAGGC...CTCTTGAATAGGAAGGTCAGCCAGTGAGGCGGCAGCATAACTTGCAGGATGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CCA 90 bp TCCCTGCTTTGCATATCTTGTCATGATTCTCTTGGAGCTATGAATGCTCTGTCCCCCTCCTCCAAGCTGTaGGCAGTGATGGTGGTCCAC +
Preference number: 4 (lower is better)
Translates to: SLLCISCHDSLGAMNALSPSSKL*AVMVVH
Trigger: GTGGACCACCATCACTGCCCACAGCTTGGAGGAGGG...GGACAGAGCATTCATAGCTCCAAGAGAATCATGACAAGATATGCAAAGCAGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CCA 90 bp CTCACCATCAGACACCAGGGGAAGGAGACCCTTAAACCGGAGAATTATAATTCAAGCGAATTGGGCACGTaGTTGTGGCCAGAGCACCGA +
Preference number: 4 (lower is better)
Translates to: LTIRHQGKETLKPENYNSSELGT*LWPEHR
Trigger: TCGGTGCTCTGGCCACAACCACGTGCCCAATTCGCT...TGAATTATAATTCTCCGGTTTAAGGGTCTCCTTCCCCTGGTGTCTGATGGTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CCA 90 bp CTCACCATCAGACACCAGGGGAAGGAGACCCTTAAACCGGAGAATTATAATTCAGAGGGATGGAGGGACTaGTGGACAAAGGCTTTGCGC +
Preference number: 4 (lower is better)
Translates to: LTIRHQGKETLKPENYNSEGWRD*WTKALR
Trigger: GCGCAAAGCCTTTGTCCACCAGTCCCTCCATCCCTC...TGAATTATAATTCTCCGGTTTAAGGGTCTCCTTCCCCTGGTGTCTGATGGTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CCA 90 bp CTCACCATCAGACACCAGGGGAAGGAGACCCTTAAACCGGAGAATTATAATTCAGAATTCTGCAGTGACTaGGCTAGTGGGGCTGGCCAG +
Preference number: 4 (lower is better)
Translates to: LTIRHQGKETLKPENYNSEFCSD*ASGAGQ
Trigger: CTGGCCAGCCCCACTAGCCCAGTCACTGCAGAATTC...TGAATTATAATTCTCCGGTTTAAGGGTCTCCTTCCCCTGGTGTCTGATGGTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CCA 90 bp GATAGACACTTCCTCTCTTTTGATTACAGGGGACCTGCCAGAGGAGATAAGATGGAATTCTGCAGTGACTaGGCTAGTGGGGCTGGCCAG +
Preference number: 4 (lower is better)
Translates to: DRHFLSFDYRGPARGDKMEFCSD*ASGAGQ
Trigger: CTGGCCAGCCCCACTAGCCCAGTCACTGCAGAATTC...CATCTTATCTCCTCTGGCAGGTCCCCTGTAATCAAAAGAGAGGAAGTGTCTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CCA 90 bp GTGCAAAAACATGAAATTGTGTCCCAGCCCACCCCTTCTAGCACACGCATTGATAGTAGCTGGCTGACTTaGGACAACCAGAGACGCTGC +
Preference number: 4 (lower is better)
Translates to: VQKHEIVSQPTPSSTRIDSSWLT*DNQRRC
Trigger: GCAGCGTCTCTGGTTGTCCCAAGTCAGCCAGCTACT...ATCAATGCGTGTGCTAGAAGGGGTGGGCTGGGACACAATTTCATGTTTTTGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CCA 90 bp TCCCTGCTTTGCATATCTTGTCATGATTCTCTTGGAGCTATGAATGCTCTGTCCGGGGCCAGCTGGAGATaGAGCGGAGATGAGAAAGGG +
Preference number: 4 (lower is better)
Translates to: SLLCISCHDSLGAMNALSGASWR*SGDEKG
Trigger: CCCTTTCTCATCTCCGCTCCATCTCCAGCTGGCCCC...GGACAGAGCATTCATAGCTCCAAGAGAATCATGACAAGATATGCAAAGCAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CCA 90 bp GTCCATCCTGCAAGTTATGCTGCCGCCTCACTGGCTGACCTTCCTATTCAAGAGAGTTTTGTTCCATGCTaGCCGGGGGTTATTTGGCTA +
Preference number: 4 (lower is better)
Translates to: VHPASYAAASLADLPIQESFVPC*PGVIWL
Trigger: TAGCCAAATAACCCCCGGCCAGCATGGAACAAAACT...CTCTTGAATAGGAAGGTCAGCCAGTGAGGCGGCAGCATAACTTGCAGGATGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CCA 90 bp CTCACCATCAGACACCAGGGGAAGGAGACCCTTAAACCGGAGAATTATAATTCAGGCTGTCCGCACATCTaGAATCTGGGGCCAGACTCT +
Preference number: 4 (lower is better)
Translates to: LTIRHQGKETLKPENYNSGCPHI*NLGPDS
Trigger: AGAGTCTGGCCCCAGATTCCAGATGTGCGGACAGCC...TGAATTATAATTCTCCGGTTTAAGGGTCTCCTTCCCCTGGTGTCTGATGGTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR TCA 90 bp CTCACCATCAGACACCAGGGGAAGGAGACCCTTAAACCGGAGAATTATAATTCAGGTGTTCTGGGAGGCTaGACTTGGGGACAGTCAAGT +
Preference number: 4 (lower is better)
Translates to: LTIRHQGKETLKPENYNSGVLGG*TWGQSS
Trigger: ACTTGACTGTCCCCAAGTTCAGCCTCCCAGAACACC...TGAATTATAATTCTCCGGTTTAAGGGTCTCCTTCCCCTGGTGTCTGATGGTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR TCA 90 bp TTAGCTGAATGGGCAGTTCACTGCAACTTCATAAACTGCAATGATATATGTGGGCATCGCGGGCGTAGCTaGGCGAATTGGGCACGTGGT +
Preference number: 4 (lower is better)
Translates to: LAEWAVHCNFINCNDICGHRGRS*ANWARG
Trigger: ACCACGTGCCCAATTCGCTCAGCTACGCCCGCGATG...CCCACATATATCATTGCAGTTTATGAAGTTGCAGTGAACTGCCCATTCAGCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR TCA 90 bp GATAGACACTTCCTCTCTTTTGATTACAGGGGACCTGCCAGAGGAGATAAGATGTTCGTAGGGAAGTTCTaGCTTTCCCGGGATGCCTGC +
Preference number: 4 (lower is better)
Translates to: DRHFLSFDYRGPARGDKMFVGKF*LSRDAC
Trigger: GCAGGCATCCCGGGAAAGTCAGAACTTCCCTACGAA...CATCTTATCTCCTCTGGCAGGTCCCCTGTAATCAAAAGAGAGGAAGTGTCTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR TCA 90 bp AAGAGAAAACTTGCAAGATTGATCTGTGAGTGTCTGAATTCTGCCTCCCAACATGAGCGAGTGAGAGGCTaGTGGCTGGGCTTGCCTTCC +
Preference number: 4 (lower is better)
Translates to: KRKLARLICECLNSASQHERVRG*WLGLPS
Trigger: GGAAGGCAAGCCCAGCCATCAGCCTCTCACTCGCTC...ATGTTGGGAGGCAGAATTCAGACACTCACAGATCAATCTTGCAAGTTTTCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR TCA 90 bp GTCCATCCTGCAAGTTATGCTGCCGCCTCACTGGCTGACCTTCCTATTCAAGAGATTTCTTCCGTTAGCTaGACAAGCAGGTTCCCATCA +
Preference number: 4 (lower is better)
Translates to: VHPASYAAASLADLPIQEISSVS*TSRFPS
Trigger: TGATGGGAACCTGCTTGTTCAGCTAACGGAAGAAAT...CTCTTGAATAGGAAGGTCAGCCAGTGAGGCGGCAGCATAACTTGCAGGATGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR TCA 90 bp CCTGCAAGTTATGCTGCCGCCTCACTGGCTGACCTTCCTATTCAAGAGGGCACTAACAACACTAGGCAATaGGAGAGATACTTTCTGCCT +
Preference number: 4 (lower is better)
Translates to: PASYAAASLADLPIQEGTNNTRQ*ERYFLP
Trigger: AGGCAGAAAGTATCTCTCTCATTGCCTAGTGTTGTT...AGTGCCCTCTTGAATAGGAAGGTCAGCCAGTGAGGCGGCAGCATAACTTGCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR TCA 90 bp GTCCATCCTGCAAGTTATGCTGCCGCCTCACTGGCTGACCTTCCTATTCAAGAGACACTGCAATTTAGCTaGATGGGCAGTTCACTGCAA +
Preference number: 4 (lower is better)
Translates to: VHPASYAAASLADLPIQETLQFS*MGSSLQ
Trigger: TTGCAGTGAACTGCCCATTCAGCTAAATTGCAGTGT...CTCTTGAATAGGAAGGTCAGCCAGTGAGGCGGCAGCATAACTTGCAGGATGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR TCA 90 bp GTCCATCCTGCAAGTTATGCTGCCGCCTCACTGGCTGACCTTCCTATTCAAGAGGTTTATGCATGTGTCTaGGAACAGTTGGAACGGACT +
Preference number: 4 (lower is better)
Translates to: VHPASYAAASLADLPIQEVYACV*EQLERT
Trigger: AGTCCGTTCCAACTGTTCTCAGACACATGCATAAAC...CTCTTGAATAGGAAGGTCAGCCAGTGAGGCGGCAGCATAACTTGCAGGATGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR GCA 90 bp GGAAGGGCTTCTCGAAAGGGAAGGGCTTTCTCCTTATTATCCCTGCTTTGCATAGGGCATGACGTACTCTaGTTTGTCACACCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: GRASRKGRAFSLLSLLCIGHDVL*FVTPAA
Trigger: TGCAGCTGGTGTGACAAAGCAGAGTACGTCATGCCC...TATGCAAAGCAGGGATAATAAGGAGAAAGCCCTTCCCTTTCGAGAAGCCCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR GCA 90 bp CCTGCAAGTTATGCTGCCGCCTCACTGGCTGACCTTCCTATTCAAGAGGGCACTCCTCACACAGAAGGATaGTTTCAAAACACGAAAGCT +
Preference number: 4 (lower is better)
Translates to: PASYAAASLADLPIQEGTPHTEG*FQNTKA
Trigger: AGCTTTCGTGTTTTGAAAGCATCCTTCTGTGTGAGG...AGTGCCCTCTTGAATAGGAAGGTCAGCCAGTGAGGCGGCAGCATAACTTGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CCA 90 bp GTCCATCCTGCAAGTTATGCTGCCGCCTCACTGGCTGACCTTCCTATTCAAGAGAAACCACCACCGTCTTaGTCTGGATGTTCACAAACT +
Preference number: 4 (lower is better)
Translates to: VHPASYAAASLADLPIQEKPPPS*SGCSQT
Trigger: AGTTTGTGAACATCCAGACCAAGACGGTGGTGGTTT...CTCTTGAATAGGAAGGTCAGCCAGTGAGGCGGCAGCATAACTTGCAGGATGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CCA 90 bp TCCCTGCTTTGCATATCTTGTCATGATTCTCTTGGAGCTATGAATGCTCTGTCCCAGACCGAGAGTCGGTaGAAGGACTGGGTGAGCTCA +
Preference number: 4 (lower is better)
Translates to: SLLCISCHDSLGAMNALSQTESR*KDWVSS
Trigger: TGAGCTCACCCAGTCCTTCCACCGACTCTCGGTCTG...GGACAGAGCATTCATAGCTCCAAGAGAATCATGACAAGATATGCAAAGCAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CCA 90 bp TCCCTGCTTTGCATATCTTGTCATGATTCTCTTGGAGCTATGAATGCTCTGTCCCTGTGCGAGGAGGGATaGAGGGACTGGTGGACAAAG +
Preference number: 4 (lower is better)
Translates to: SLLCISCHDSLGAMNALSLCEEG*RDWWTK
Trigger: CTTTGTCCACCAGTCCCTCCATCCCTCCTCGCACAG...GGACAGAGCATTCATAGCTCCAAGAGAATCATGACAAGATATGCAAAGCAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CCA 90 bp GATAGACACTTCCTCTCTTTTGATTACAGGGGACCTGCCAGAGGAGATAAGATGAGTAGCTGGCTGACTTaGGACAACCAGAGACGCTGC +
Preference number: 4 (lower is better)
Translates to: DRHFLSFDYRGPARGDKMSSWLT*DNQRRC
Trigger: GCAGCGTCTCTGGTTGTCCCAAGTCAGCCAGCTACT...CATCTTATCTCCTCTGGCAGGTCCCCTGTAATCAAAAGAGAGGAAGTGTCTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CCA 90 bp CTCACCATCAGACACCAGGGGAAGGAGACCCTTAAACCGGAGAATTATAATTCACTGGTGACCCAGACTTaGGGTCTTCCTCAGCACCAT +
Preference number: 4 (lower is better)
Translates to: LTIRHQGKETLKPENYNSLVTQT*GLPQHH
Trigger: ATGGTGCTGAGGAAGACCCCAAGTCTGGGTCACCAG...TGAATTATAATTCTCCGGTTTAAGGGTCTCCTTCCCCTGGTGTCTGATGGTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CCA 90 bp TCCCTGCTTTGCATATCTTGTCATGATTCTCTTGGAGCTATGAATGCTCTGTCCCGCACATCTGGAATCTaGGGCCAGACTCTCAGGTGC +
Preference number: 4 (lower is better)
Translates to: SLLCISCHDSLGAMNALSRTSGI*GQTLRC
Trigger: GCACCTGAGAGTCTGGCCCCAGATTCCAGATGTGCG...GGACAGAGCATTCATAGCTCCAAGAGAATCATGACAAGATATGCAAAGCAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CCA 90 bp ATTGAGGCCTCAGTTACTTGCTCTGTAGATGGCAGACAAGTAGATCTAGTCAGGGTCTGGCTTCAGATTTaGGAGGCACTGGAGGTGGAG +
Preference number: 4 (lower is better)
Translates to: IEASVTCSVDGRQVDLVRVWLQI*EALEVE
Trigger: CTCCACCTCCAGTGCCTCCCAAATCTGAAGCCAGAC...CCTGACTAGATCTACTTGTCTGCCATCTACAGAGCAAGTAACTGAGGCCTCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583696.1
CDS-3UTR TCA 90 bp GTGCAAAAACATGAAATTGTGTCCCAGCCCACCCCTTCTAGCACACGCATTGATCCTCCTCCACACTGTTaGAATATTGCACTGGCTCCT +
Preference number: 4 (lower is better)
Translates to: VQKHEIVSQPTPSSTRIDPPPHC*NIALAP
Trigger: AGGAGCCAGTGCAATATTTCAACAGTGTGGAGGAGG...ATCAATGCGTGTGCTAGAAGGGGTGGGCTGGGACACAATTTCATGTTTTTGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR TCA 90 bp GATAGACACTTCCTCTCTTTTGATTACAGGGGACCTGCCAGAGGAGATAAGATGCCTGCCCCATTAGAGTaGGTTCATCCCCAGTACACA +
Preference number: 4 (lower is better)
Translates to: DRHFLSFDYRGPARGDKMPAPLE*VHPQYT
Trigger: TGTGTACTGGGGATGAACTCACTCTAATGGGGCAGG...CATCTTATCTCCTCTGGCAGGTCCCCTGTAATCAAAAGAGAGGAAGTGTCTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR TCA 90 bp AAGAGAAAACTTGCAAGATTGATCTGTGAGTGTCTGAATTCTGCCTCCCAACATGGTGCCCCTCACGGATaGAGTGGAGGTCGTATGGGT +
Preference number: 4 (lower is better)
Translates to: KRKLARLICECLNSASQHGAPHG*SGGRMG
Trigger: ACCCATACGACCTCCACTTCATCCGTGAGGGGCACC...ATGTTGGGAGGCAGAATTCAGACACTCACAGATCAATCTTGCAAGTTTTCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR TCA 90 bp CTGCTTTGCATATCTTGTCATGATTCTCTTGGAGCTATGAATGCTCTGTCCAGTCTCCGAGAGATCTGGTaGCCCAGACTTGGGGTCTTC +
Preference number: 4 (lower is better)
Translates to: LLCISCHDSLGAMNALSSLREIW*PRLGVF
Trigger: GAAGACCCCAAGTCTGGGTCACCAGATCTCTCGGAG...ACTGGACAGAGCATTCATAGCTCCAAGAGAATCATGACAAGATATGCAAAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR TCA 90 bp GTCCATCCTGCAAGTTATGCTGCCGCCTCACTGGCTGACCTTCCTATTCAAGAGAAGAAGCAATCTGAATaGCAGAGCACAGAACACAGT +
Preference number: 4 (lower is better)
Translates to: VHPASYAAASLADLPIQEKKQSE*QSTEHS
Trigger: ACTGTGTTCTGTGCTCTGTCATTCAGATTGCTTCTT...CTCTTGAATAGGAAGGTCAGCCAGTGAGGCGGCAGCATAACTTGCAGGATGGAC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR TCA 90 bp CCTGCAAGTTATGCTGCCGCCTCACTGGCTGACCTTCCTATTCAAGAGGGCACTAAGCATGAAGTAGGTTaGGAATGCCTAATGTACTCT +
Preference number: 4 (lower is better)
Translates to: PASYAAASLADLPIQEGTKHEVG*ECLMYS
Trigger: AGAGTACATTAGGCATTCTCAACCTACTTCATGCTT...AGTGCCCTCTTGAATAGGAAGGTCAGCCAGTGAGGCGGCAGCATAACTTGCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR TCA 90 bp GGAAGGGCTTCTCGAAAGGGAAGGGCTTTCTCCTTATTATCCCTGCTTTGCATAACACTTCCTCTCTTTTaGTTACAGGGGACCTGCCAG +
Preference number: 4 (lower is better)
Translates to: GRASRKGRAFSLLSLLCITLPLF*LQGTCQ
Trigger: CTGGCAGGTCCCCTGTAATCAAAAGAGAGGAAGTGT...TATGCAAAGCAGGGATAATAAGGAGAAAGCCCTTCCCTTTCGAGAAGCCCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR GCA 90 bp TCCCTGCTTTGCATATCTTGTCATGATTCTCTTGGAGCTATGAATGCTCTGTCCCACGCGTTCAGGAAATaGCTTAGCCACCTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: SLLCISCHDSLGAMNALSHAFRK*LSHLLH
Trigger: GTGGAGGAGGTGGCTAAGGCATTTCCTGAACGCGTG...GGACAGAGCATTCATAGCTCCAAGAGAATCATGACAAGATATGCAAAGCAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR GCA 90 bp GATAGACACTTCCTCTCTTTTGATTACAGGGGACCTGCCAGAGGAGATAAGATGGCTGCTACTGAATTCTaGAGTGACTGGGCTAGTGGG +
Preference number: 4 (lower is better)
Translates to: DRHFLSFDYRGPARGDKMAATEF*SDWASG
Trigger: CCCACTAGCCCAGTCACTGCAGAATTCAGTAGCAGC...CATCTTATCTCCTCTGGCAGGTCCCCTGTAATCAAAAGAGAGGAAGTGTCTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR GCA 90 bp GTCCATCCTGCAAGTTATGCTGCCGCCTCACTGGCTGACCTTCCTATTCAAGAGCTTTGTCACACCAGCTaGAAGAGATTTCACATCTGT +
Preference number: 4 (lower is better)
Translates to: VHPASYAAASLADLPIQELCHTS*KRFHIC
Trigger: ACAGATGTGAAATCTCTTGCAGCTGGTGTGACAAAG...CTCTTGAATAGGAAGGTCAGCCAGTGAGGCGGCAGCATAACTTGCAGGATGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR GCA 90 bp GTGCAAAAACATGAAATTGTGTCCCAGCCCACCCCTTCTAGCACACGCATTGATCTCATGTCCTGTGAGTaGAGTACCAGCACTTCCTCA +
Preference number: 4 (lower is better)
Translates to: VQKHEIVSQPTPSSTRIDLMSCE*STSTSS
Trigger: TGAGGAAGTGCTGGTACTGCACTCACAGGACATGAG...ATCAATGCGTGTGCTAGAAGGGGTGGGCTGGGACACAATTTCATGTTTTTGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CCA 90 bp TTAGCTGAATGGGCAGTTCACTGCAACTTCATAAACTGCAATGATATATGTGGGCCCTCCTCCAAGCTGTaGGCAGTGATGGTGGTCCAC +
Preference number: 4 (lower is better)
Translates to: LAEWAVHCNFINCNDICGPSSKL*AVMVVH
Trigger: GTGGACCACCATCACTGCCCACAGCTTGGAGGAGGG...CCCACATATATCATTGCAGTTTATGAAGTTGCAGTGAACTGCCCATTCAGCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CCA 90 bp TCCCTGCTTTGCATATCTTGTCATGATTCTCTTGGAGCTATGAATGCTCTGTCCGAAGTGGAGGTCGTATaGGTTTCTCGGTGGAGGGCT +
Preference number: 4 (lower is better)
Translates to: SLLCISCHDSLGAMNALSEVEVV*VSRWRA
Trigger: AGCCCTCCACCGAGAAACCCATACGACCTCCACTTC...GGACAGAGCATTCATAGCTCCAAGAGAATCATGACAAGATATGCAAAGCAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CCA 90 bp GTGCAAAAACATGAAATTGTGTCCCAGCCCACCCCTTCTAGCACACGCATTGATAGCACCGACCCTTCTTaGGGCTCTTGCATTCTTCAT +
Preference number: 4 (lower is better)
Translates to: VQKHEIVSQPTPSSTRIDSTDPS*GSCILH
Trigger: ATGAAGAATGCAAGAGCCCCAAGAAGGGTCGGTGCT...ATCAATGCGTGTGCTAGAAGGGGTGGGCTGGGACACAATTTCATGTTTTTGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CCA 90 bp TTAGCTGAATGGGCAGTTCACTGCAACTTCATAAACTGCAATGATATATGTGGGCTTTGCGCTTCGGGGTaGAACAGGTGGGGCGTTCAG +
Preference number: 4 (lower is better)
Translates to: LAEWAVHCNFINCNDICGLCASG*NRWGVQ
Trigger: CTGAACGCCCCACCTGTTCCACCCCGAAGCGCAAAG...CCCACATATATCATTGCAGTTTATGAAGTTGCAGTGAACTGCCCATTCAGCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CCA 90 bp CTGCTTTGCATATCTTGTCATGATTCTCTTGGAGCTATGAATGCTCTGTCCAGTTGTGCACCTCGGTCATaGGCTGTCCGCACATCTGGA +
Preference number: 4 (lower is better)
Translates to: LLCISCHDSLGAMNALSSCAPRS*AVRTSG
Trigger: TCCAGATGTGCGGACAGCCCATGACCGAGGTGCACA...ACTGGACAGAGCATTCATAGCTCCAAGAGAATCATGACAAGATATGCAAAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CCA 90 bp CTCACCATCAGACACCAGGGGAAGGAGACCCTTAAACCGGAGAATTATAATTCAATGCTGCCGCCTCACTaGCTGACCTTCCTATTCAAG +
Preference number: 4 (lower is better)
Translates to: LTIRHQGKETLKPENYNSMLPPH*LTFLFK
Trigger: CTTGAATAGGAAGGTCAGCCAGTGAGGCGGCAGCAT...TGAATTATAATTCTCCGGTTTAAGGGTCTCCTTCCCCTGGTGTCTGATGGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CCA 90 bp GTCCATCCTGCAAGTTATGCTGCCGCCTCACTGGCTGACCTTCCTATTCAAGAGTGCAATTTAGCTGAATaGGCAGTTCACTGCAACTTC +
Preference number: 4 (lower is better)
Translates to: VHPASYAAASLADLPIQECNLAE*AVHCNF
Trigger: GAAGTTGCAGTGAACTGCCCATTCAGCTAAATTGCA...CTCTTGAATAGGAAGGTCAGCCAGTGAGGCGGCAGCATAACTTGCAGGATGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR TCA 90 bp GTGCAAAAACATGAAATTGTGTCCCAGCCCACCCCTTCTAGCACACGCATTGATCCCCAGTACACAGGGTaGTGTTGTAAACTTCAGTGT +
Preference number: 4 (lower is better)
Translates to: VQKHEIVSQPTPSSTRIDPQYTG*CCKLQC
Trigger: ACACTGAAGTTTACAACATCACCCTGTGTACTGGGG...ATCAATGCGTGTGCTAGAAGGGGTGGGCTGGGACACAATTTCATGTTTTTGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR TCA 90 bp AAGAGAAAACTTGCAAGATTGATCTGTGAGTGTCTGAATTCTGCCTCCCAACATCAGATACCTAGCCAGTaGTGGACCAGGGTTTCGGGC +
Preference number: 4 (lower is better)
Translates to: KRKLARLICECLNSASQHQIPSQ*WTRVSG
Trigger: GCCCGAAACCCTGGTCCATCACTGGCTAGGTATCTG...ATGTTGGGAGGCAGAATTCAGACACTCACAGATCAATCTTGCAAGTTTTCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR TCA 90 bp GTCCATCCTGCAAGTTATGCTGCCGCCTCACTGGCTGACCTTCCTATTCAAGAGAAGCATGAAGTAGGTTaGGAATGCCTAATGTACTCT +
Preference number: 4 (lower is better)
Translates to: VHPASYAAASLADLPIQEKHEVG*ECLMYS
Trigger: AGAGTACATTAGGCATTCTCAACCTACTTCATGCTT...CTCTTGAATAGGAAGGTCAGCCAGTGAGGCGGCAGCATAACTTGCAGGATGGAC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR TCA 90 bp CTCACCATCAGACACCAGGGGAAGGAGACCCTTAAACCGGAGAATTATAATTCAAAAGGCCGGTGCGTCTaGTTTCTCAGCTCTCGTAAA +
Preference number: 4 (lower is better)
Translates to: LTIRHQGKETLKPENYNSKGRCV*FLSSRK
Trigger: TTTACGAGAGCTGAGAAATCAGACGCACCGGCCTTT...TGAATTATAATTCTCCGGTTTAAGGGTCTCCTTCCCCTGGTGTCTGATGGTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR TCA 90 bp ATTGAGGCCTCAGTTACTTGCTCTGTAGATGGCAGACAAGTAGATCTAGTCAGGGCACAACCTGTCTATTaGGGCCTCAGTTACTTGCTC +
Preference number: 4 (lower is better)
Translates to: IEASVTCSVDGRQVDLVRAQPVY*GLSYLL
Trigger: GAGCAAGTAACTGAGGCCTCAATAGACAGGTTGTGC...CCTGACTAGATCTACTTGTCTGCCATCTACAGAGCAAGTAACTGAGGCCTCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583696.1
CDS-3UTR GCA 90 bp CTGCTTTGCATATCTTGTCATGATTCTCTTGGAGCTATGAATGCTCTGTCCAGTCACGCGTTCAGGAAATaGCTTAGCCACCTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: LLCISCHDSLGAMNALSSHAFRK*LSHLLH
Trigger: GTGGAGGAGGTGGCTAAGGCATTTCCTGAACGCGTG...ACTGGACAGAGCATTCATAGCTCCAAGAGAATCATGACAAGATATGCAAAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR GCA 90 bp GATAGACACTTCCTCTCTTTTGATTACAGGGGACCTGCCAGAGGAGATAAGATGCCTTCTTGGGGCTCTTaGATTCTTCATTCCAGTCGG +
Preference number: 4 (lower is better)
Translates to: DRHFLSFDYRGPARGDKMPSWGS*ILHSSR
Trigger: CCGACTGGAATGAAGAATGCAAGAGCCCCAAGAAGG...CATCTTATCTCCTCTGGCAGGTCCCCTGTAATCAAAAGAGAGGAAGTGTCTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR GCA 90 bp AAGAGAAAACTTGCAAGATTGATCTGTGAGTGTCTGAATTCTGCCTCCCAACATGGTGGACAAAGGCTTTaGGCTTCGGGGTGGAACAGG +
Preference number: 4 (lower is better)
Translates to: KRKLARLICECLNSASQHGGQRL*ASGWNR
Trigger: CCTGTTCCACCCCGAAGCGCAAAGCCTTTGTCCACC...ATGTTGGGAGGCAGAATTCAGACACTCACAGATCAATCTTGCAAGTTTTCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR GCA 90 bp CACCAAGCATACAACATTAAAGTGTCAATTCGTATCACTAACATTTTCAGGCACAGGTCAGCAGGTGGCTaGCATGGGGAACCGTCGCCA +
Preference number: 4 (lower is better)
Translates to: HQAYNIKVSIRITNIFRHRSAGG*HGEPSP
Trigger: TGGCGACGGTTCCCCATGGCAGCCACCTGCTGACCT...GTGCCTGAAAATGTTAGTGATACGAATTGACACTTTAATGTTGTATGCTTGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR GCA 90 bp TTAGCTGAATGGGCAGTTCACTGCAACTTCATAAACTGCAATGATATATGTGGGGGCCAGACTCTCAGGTaGAGGGGAGTAGATGATGCC +
Preference number: 4 (lower is better)
Translates to: LAEWAVHCNFINCNDICGGQTLR*RGVDDA
Trigger: GGCATCATCTACTCCCCTGCACCTGAGAGTCTGGCC...CCCACATATATCATTGCAGTTTATGAAGTTGCAGTGAACTGCCCATTCAGCTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR GCA 90 bp GTGCAAAAACATGAAATTGTGTCCCAGCCCACCCCTTCTAGCACACGCATTGATGATATAAGTCCATCCTaGAAGTTATGCTGCCGCCTC +
Preference number: 4 (lower is better)
Translates to: VQKHEIVSQPTPSSTRIDDISPS*KLCCRL
Trigger: GAGGCGGCAGCATAACTTGCAGGATGGACTTATATC...ATCAATGCGTGTGCTAGAAGGGGTGGGCTGGGACACAATTTCATGTTTTTGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR GCA 90 bp TCCCTGCTTTGCATATCTTGTCATGATTCTCTTGGAGCTATGAATGCTCTGTCCGGCATCACTTTTCACTaGAGAATCGCAGGGAAGGGC +
Preference number: 4 (lower is better)
Translates to: SLLCISCHDSLGAMNALSGITFH*RIAGKG
Trigger: GCCCTTCCCTGCGATTCTGCAGTGAAAAGTGATGCC...GGACAGAGCATTCATAGCTCCAAGAGAATCATGACAAGATATGCAAAGCAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CCA 90 bp CTGCTTTGCATATCTTGTCATGATTCTCTTGGAGCTATGAATGCTCTGTCCAGTCTTCACCAGGTGTTCTaGGAGGCTGAACTTGGGGAC +
Preference number: 4 (lower is better)
Translates to: LLCISCHDSLGAMNALSSLHQVF*EAELGD
Trigger: GTCCCCAAGTTCAGCCTCCCAGAACACCTGGTGAAG...ACTGGACAGAGCATTCATAGCTCCAAGAGAATCATGACAAGATATGCAAAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CCA 90 bp AAGAGAAAACTTGCAAGATTGATCTGTGAGTGTCTGAATTCTGCCTCCCAACATAGCGAATTGGGCACGTaGTTGTGGCCAGAGCACCGA +
Preference number: 4 (lower is better)
Translates to: KRKLARLICECLNSASQHSELGT*LWPEHR
Trigger: TCGGTGCTCTGGCCACAACCACGTGCCCAATTCGCT...ATGTTGGGAGGCAGAATTCAGACACTCACAGATCAATCTTGCAAGTTTTCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CCA 90 bp GTGCAAAAACATGAAATTGTGTCCCAGCCCACCCCTTCTAGCACACGCATTGATTTCTTCACTAGCTTCTaGGAAAAGGTAGTCGCTCCC +
Preference number: 4 (lower is better)
Translates to: VQKHEIVSQPTPSSTRIDFFTSF*EKVVAP
Trigger: GGGAGCGACTACCTTTTCCCAGAAGCTAGTGAAGAA...ATCAATGCGTGTGCTAGAAGGGGTGGGCTGGGACACAATTTCATGTTTTTGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CCA 90 bp AAGAGAAAACTTGCAAGATTGATCTGTGAGTGTCTGAATTCTGCCTCCCAACATGAGGGATGGAGGGACTaGTGGACAAAGGCTTTGCGC +
Preference number: 4 (lower is better)
Translates to: KRKLARLICECLNSASQHEGWRD*WTKALR
Trigger: GCGCAAAGCCTTTGTCCACCAGTCCCTCCATCCCTC...ATGTTGGGAGGCAGAATTCAGACACTCACAGATCAATCTTGCAAGTTTTCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CCA 90 bp GGAAGGGCTTCTCGAAAGGGAAGGGCTTTCTCCTTATTATCCCTGCTTTGCATATCTCTTTGGTGTGCCTaGCGTCTTTTGTCTAGGGTA +
Preference number: 4 (lower is better)
Translates to: GRASRKGRAFSLLSLLCISLWCA*RLLSRV
Trigger: TACCCTAGACAAAAGACGCCAGGCACACCAAAGAGA...TATGCAAAGCAGGGATAATAAGGAGAAAGCCCTTCCCTTTCGAGAAGCCCTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CCA 90 bp GTCCATCCTGCAAGTTATGCTGCCGCCTCACTGGCTGACCTTCCTATTCAAGAGAAAATCAAAAGGTGCTaGGCAGTTTCTCTTTGGTGT +
Preference number: 4 (lower is better)
Translates to: VHPASYAAASLADLPIQEKIKRC*AVSLWC
Trigger: ACACCAAAGAGAAACTGCCCAGCACCTTTTGATTTT...CTCTTGAATAGGAAGGTCAGCCAGTGAGGCGGCAGCATAACTTGCAGGATGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CCA 90 bp CTGCTTTGCATATCTTGTCATGATTCTCTTGGAGCTATGAATGCTCTGTCCAGTCTGGTGACCCAGACTTaGGGTCTTCCTCAGCACCAT +
Preference number: 4 (lower is better)
Translates to: LLCISCHDSLGAMNALSSLVTQT*GLPQHH
Trigger: ATGGTGCTGAGGAAGACCCCAAGTCTGGGTCACCAG...ACTGGACAGAGCATTCATAGCTCCAAGAGAATCATGACAAGATATGCAAAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CCA 90 bp GTGCAAAAACATGAAATTGTGTCCCAGCCCACCCCTTCTAGCACACGCATTGATGAAGGGTTCTGTGTGTaGATCTCTGGGCATCACTTT +
Preference number: 4 (lower is better)
Translates to: VQKHEIVSQPTPSSTRIDEGFCV*ISGHHF
Trigger: AAAGTGATGCCCAGAGATCCACACACAGAACCCTTC...ATCAATGCGTGTGCTAGAAGGGGTGGGCTGGGACACAATTTCATGTTTTTGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CCA 90 bp TTAGCTGAATGGGCAGTTCACTGCAACTTCATAAACTGCAATGATATATGTGGGCCCACCTCCCATCCCTaGACTTCTCAGGGAGCTGTA +
Preference number: 4 (lower is better)
Translates to: LAEWAVHCNFINCNDICGPTSHP*TSQGAV
Trigger: TACAGCTCCCTGAGAAGTCCAGGGATGGGAGGTGGG...CCCACATATATCATTGCAGTTTATGAAGTTGCAGTGAACTGCCCATTCAGCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR TCA 90 bp CTGCTTTGCATATCTTGTCATGATTCTCTTGGAGCTATGAATGCTCTGTCCAGTAGGTCCCTGCAACCATaGAGGTTCACCTCACTGTTG +
Preference number: 4 (lower is better)
Translates to: LLCISCHDSLGAMNALSSRSLQP*RFTSLL
Trigger: CAACAGTGAGGTGAACCTTCATGGTTGCAGGGACCT...ACTGGACAGAGCATTCATAGCTCCAAGAGAATCATGACAAGATATGCAAAGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR TCA 90 bp AAGAGAAAACTTGCAAGATTGATCTGTGAGTGTCTGAATTCTGCCTCCCAACATTCCCGGGATGCCTGCTaGTTCTTCACTAGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: KRKLARLICECLNSASQHSRDAC*FFTSFW
Trigger: CCAGAAGCTAGTGAAGAATCAGCAGGCATCCCGGGA...ATGTTGGGAGGCAGAATTCAGACACTCACAGATCAATCTTGCAAGTTTTCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR TCA 90 bp CTGCTTTGCATATCTTGTCATGATTCTCTTGGAGCTATGAATGCTCTGTCCAGTATAATGGTTAGGCCATaGGAGCCGAGAGGACACAGC +
Preference number: 4 (lower is better)
Translates to: LLCISCHDSLGAMNALSSIMVRP*EPRGHS
Trigger: GCTGTGTCCTCTCGGCTCTCATGGCCTAACCATTAT...ACTGGACAGAGCATTCATAGCTCCAAGAGAATCATGACAAGATATGCAAAGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR TCA 90 bp TTAGCTGAATGGGCAGTTCACTGCAACTTCATAAACTGCAATGATATATGTGGGCAGAGAGTAGCTGGCTaGCTTGGGACAACCAGAGAC +
Preference number: 4 (lower is better)
Translates to: LAEWAVHCNFINCNDICGQRVAG*LGTTRD
Trigger: GTCTCTGGTTGTCCCAAGTCAGCCAGCTACTCTCTG...CCCACATATATCATTGCAGTTTATGAAGTTGCAGTGAACTGCCCATTCAGCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR TCA 90 bp GTGCAAAAACATGAAATTGTGTCCCAGCCCACCCCTTCTAGCACACGCATTGATCAAGAGACAGGGTTCTaGGAATCTTTGGAGTCATTC +
Preference number: 4 (lower is better)
Translates to: VQKHEIVSQPTPSSTRIDQETGF*ESLESF
Trigger: GAATGACTCCAAAGATTCTCAGAACCCTGTCTCTTG...ATCAATGCGTGTGCTAGAAGGGGTGGGCTGGGACACAATTTCATGTTTTTGCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR TCA 90 bp GTCCATCCTGCAAGTTATGCTGCCGCCTCACTGGCTGACCTTCCTATTCAAGAGTGTTGTATTTCGACATaGGACAAGAATAAACACTGC +
Preference number: 4 (lower is better)
Translates to: VHPASYAAASLADLPIQECCIST*DKNKHC
Trigger: GCAGTGTTTATTCTTGTCTCATGTCGAAATACAACA...CTCTTGAATAGGAAGGTCAGCCAGTGAGGCGGCAGCATAACTTGCAGGATGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR TCA 90 bp TGGGGCATTATCAGTAAGGTAGATTTTTGTCAACAAAGGATTGATGACTGTGAAGGCGAGCGGATGGCTTaGGCTCAGGACTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: WGIISKVDFCQQRIDDCEGERMA*AQDFET
Trigger: GGTCTCAAAGTCCTGAGCTCAAGCCATCCGCTCGCC...TTCACAGTCATCAATCCTTTGTTGACAAAAATCTACCTTACTGATAATGCCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583696.1
CDS-3UTR GCA 90 bp GGAAGGGCTTCTCGAAAGGGAAGGGCTTTCTCCTTATTATCCCTGCTTTGCATAAAGTGCAAAGGAAAGTaGATGGGGAGGATCTTGTTG +
Preference number: 4 (lower is better)
Translates to: GRASRKGRAFSLLSLLCIKCKGK*MGRILL
Trigger: CAACAAGATCCTCCCCATGCACTTTCCTTTGCACTT...TATGCAAAGCAGGGATAATAAGGAGAAAGCCCTTCCCTTTCGAGAAGCCCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR GCA 90 bp TCCCTGCTTTGCATATCTTGTCATGATTCTCTTGGAGCTATGAATGCTCTGTCCCCTTCTTGGGGCTCTTaGATTCTTCATTCCAGTCGG +
Preference number: 4 (lower is better)
Translates to: SLLCISCHDSLGAMNALSPSWGS*ILHSSR
Trigger: CCGACTGGAATGAAGAATGCAAGAGCCCCAAGAAGG...GGACAGAGCATTCATAGCTCCAAGAGAATCATGACAAGATATGCAAAGCAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR GCA 90 bp CACCAAGCATACAACATTAAAGTGTCAATTCGTATCACTAACATTTTCAGGCACGGAGAGCGAGTCTGTTaGCGCGCTGGCTTGACTGTG +
Preference number: 4 (lower is better)
Translates to: HQAYNIKVSIRITNIFRHGERVC*RAGLTV
Trigger: CACAGTCAAGCCAGCGCGGCAACAGACTCGCTCTCC...GTGCCTGAAAATGTTAGTGATACGAATTGACACTTTAATGTTGTATGCTTGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR GCA 90 bp CTCACCATCAGACACCAGGGGAAGGAGACCCTTAAACCGGAGAATTATAATTCAGAGATTTCACATCTGTaGTCTCCAGAGAGTAGCTGG +
Preference number: 4 (lower is better)
Translates to: LTIRHQGKETLKPENYNSEISHL*SPESSW
Trigger: CCAGCTACTCTCTGGAGAGCACAGATGTGAAATCTC...TGAATTATAATTCTCCGGTTTAAGGGTCTCCTTCCCCTGGTGTCTGATGGTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR GCA 90 bp GATAGACACTTCCTCTCTTTTGATTACAGGGGACCTGCCAGAGGAGATAAGATGCATGGGAGTATTACATaGAAAAACCAGCCCTGCGGT +
Preference number: 4 (lower is better)
Translates to: DRHFLSFDYRGPARGDKMHGSIT*KNQPCG
Trigger: ACCGCAGGGCTGGTTTTTGCATGTAATACTCCCATG...CATCTTATCTCCTCTGGCAGGTCCCCTGTAATCAAAAGAGAGGAAGTGTCTATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR GCA 90 bp CCTGCAAGTTATGCTGCCGCCTCACTGGCTGACCTTCCTATTCAAGAGGGCACTTGCAACTTCATAAACTaGAATGATATATGTGGGTTG +
Preference number: 4 (lower is better)
Translates to: PASYAAASLADLPIQEGTCNFIN*NDICGL
Trigger: CAACCCACATATATCATTGCAGTTTATGAAGTTGCA...AGTGCCCTCTTGAATAGGAAGGTCAGCCAGTGAGGCGGCAGCATAACTTGCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR GCA 90 bp GATAGACACTTCCTCTCTTTTGATTACAGGGGACCTGCCAGAGGAGATAAGATGGCTGTATGGATAACATaGAGGTGGCTGTGGAATGTG +
Preference number: 4 (lower is better)
Translates to: DRHFLSFDYRGPARGDKMAVWIT*RWLWNV
Trigger: CACATTCCACAGCCACCTGCATGTTATCCATACAGC...CATCTTATCTCCTCTGGCAGGTCCCCTGTAATCAAAAGAGAGGAAGTGTCTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CCA 90 bp AAGAGAAAACTTGCAAGATTGATCTGTGAGTGTCTGAATTCTGCCTCCCAACATGTATGGGTTTCTCGGTaGAGGGCTTGGCACAGTCAC +
Preference number: 4 (lower is better)
Translates to: KRKLARLICECLNSASQHVWVSR*RAWHSH
Trigger: GTGACTGTGCCAAGCCCTCCACCGAGAAACCCATAC...ATGTTGGGAGGCAGAATTCAGACACTCACAGATCAATCTTGCAAGTTTTCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CCA 90 bp AAGAGAAAACTTGCAAGATTGATCTGTGAGTGTCTGAATTCTGCCTCCCAACATGAAGTGGAGGTCGTATaGGTTTCTCGGTGGAGGGCT +
Preference number: 4 (lower is better)
Translates to: KRKLARLICECLNSASQHEVEVV*VSRWRA
Trigger: AGCCCTCCACCGAGAAACCCATACGACCTCCACTTC...ATGTTGGGAGGCAGAATTCAGACACTCACAGATCAATCTTGCAAGTTTTCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CCA 90 bp ATAATTCAACAGAAACTGTCATTTCCCCAGACATCATGGGAGTATTACATGCAAAGTCTGTTGCCGCGCTaGCTTGACTGTGCGAGGAGG +
Preference number: 4 (lower is better)
Translates to: IIQQKLSFPQTSWEYYMQSLLPR*LDCARR
Trigger: CCTCCTCGCACAGTCAAGCCAGCGCGGCAACAGACT...TTGCATGTAATACTCCCATGATGTCTGGGGAAATGACAGTTTCTGTTGAATTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CCA 90 bp CACCAAGCATACAACATTAAAGTGTCAATTCGTATCACTAACATTTTCAGGCACAGGACAAGGTGGGGCTaGGAGAGCGAGTCTGTTGCC +
Preference number: 4 (lower is better)
Translates to: HQAYNIKVSIRITNIFRHRTRWG*ESESVA
Trigger: GGCAACAGACTCGCTCTCCCAGCCCCACCTTGTCCT...GTGCCTGAAAATGTTAGTGATACGAATTGACACTTTAATGTTGTATGCTTGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CCA 90 bp CTGCTTTGCATATCTTGTCATGATTCTCTTGGAGCTATGAATGCTCTGTCCAGTAATAGTAGGACAAGGTaGGGCTGGGAGAGCGAGTCT +
Preference number: 4 (lower is better)
Translates to: LLCISCHDSLGAMNALSSNSRTR*GWESES
Trigger: AGACTCGCTCTCCCAGCCCCACCTTGTCCTACTATT...ACTGGACAGAGCATTCATAGCTCCAAGAGAATCATGACAAGATATGCAAAGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CCA 90 bp GATAGACACTTCCTCTCTTTTGATTACAGGGGACCTGCCAGAGGAGATAAGATGTCTCTTTGGTGTGCCTaGCGTCTTTTGTCTAGGGTA +
Preference number: 4 (lower is better)
Translates to: DRHFLSFDYRGPARGDKMSLWCA*RLLSRV
Trigger: TACCCTAGACAAAAGACGCCAGGCACACCAAAGAGA...CATCTTATCTCCTCTGGCAGGTCCCCTGTAATCAAAAGAGAGGAAGTGTCTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CCA 90 bp CACCAAGCATACAACATTAAAGTGTCAATTCGTATCACTAACATTTTCAGGCACGGGGCCAGCTGGAGATaGAGCGGAGATGAGAAAGGG +
Preference number: 4 (lower is better)
Translates to: HQAYNIKVSIRITNIFRHGASWR*SGDEKG
Trigger: CCCTTTCTCATCTCCGCTCCATCTCCAGCTGGCCCC...GTGCCTGAAAATGTTAGTGATACGAATTGACACTTTAATGTTGTATGCTTGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CCA 90 bp CACCAAGCATACAACATTAAAGTGTCAATTCGTATCACTAACATTTTCAGGCACGATCTGGGGGCCAGCTaGAGATGGAGCGGAGATGAG +
Preference number: 4 (lower is better)
Translates to: HQAYNIKVSIRITNIFRHDLGAS*RWSGDE
Trigger: CTCATCTCCGCTCCATCTCCAGCTGGCCCCCAGATC...GTGCCTGAAAATGTTAGTGATACGAATTGACACTTTAATGTTGTATGCTTGGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CCA 90 bp GTCCATCCTGCAAGTTATGCTGCCGCCTCACTGGCTGACCTTCCTATTCAAGAGTTTCCCCAGACATCATaGGAGTATTACATGCAAAAA +
Preference number: 4 (lower is better)
Translates to: VHPASYAAASLADLPIQEFPQTS*EYYMQK
Trigger: TTTTTGCATGTAATACTCCCATGATGTCTGGGGAAA...CTCTTGAATAGGAAGGTCAGCCAGTGAGGCGGCAGCATAACTTGCAGGATGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CCA 90 bp GATAGACACTTCCTCTCTTTTGATTACAGGGGACCTGCCAGAGGAGATAAGATGTGGATAACATGCAGGTaGCTGTGGAATGTGAGCAGA +
Preference number: 4 (lower is better)
Translates to: DRHFLSFDYRGPARGDKMWITCR*LWNVSR
Trigger: TCTGCTCACATTCCACAGCCACCTGCATGTTATCCA...CATCTTATCTCCTCTGGCAGGTCCCCTGTAATCAAAAGAGAGGAAGTGTCTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR TCA 90 bp GGAAGGGCTTCTCGAAAGGGAAGGGCTTTCTCCTTATTATCCCTGCTTTGCATATTCATTGCATTCACCTaGAGCAACCTTCACGTTGAA +
Preference number: 4 (lower is better)
Translates to: GRASRKGRAFSLLSLLCIFIAFT*SNLHVE
Trigger: TTCAACGTGAAGGTTGCTTCAGGTGAATGCAATGAA...TATGCAAAGCAGGGATAATAAGGAGAAAGCCCTTCCCTTTCGAGAAGCCCTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR TCA 90 bp GATAGACACTTCCTCTCTTTTGATTACAGGGGACCTGCCAGAGGAGATAAGATGGGTGATTCATACAAATaGGGCACGGCATTTTGCCTT +
Preference number: 4 (lower is better)
Translates to: DRHFLSFDYRGPARGDKMGDSYK*GTAFCL
Trigger: AAGGCAAAATGCCGTGCCTCATTTGTATGAATCACC...CATCTTATCTCCTCTGGCAGGTCCCCTGTAATCAAAAGAGAGGAAGTGTCTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR TCA 90 bp CTGCTTTGCATATCTTGTCATGATTCTCTTGGAGCTATGAATGCTCTGTCCAGTCTGCTGAGTGTTTGTTaGGTGACGTACAAGGCACAC +
Preference number: 4 (lower is better)
Translates to: LLCISCHDSLGAMNALSSLLSVC*VTYKAH
Trigger: GTGTGCCTTGTACGTCACTCAACAAACACTCAGCAG...ACTGGACAGAGCATTCATAGCTCCAAGAGAATCATGACAAGATATGCAAAGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR TCA 90 bp GATAGACACTTCCTCTCTTTTGATTACAGGGGACCTGCCAGAGGAGATAAGATGCAAGAGACAGGGTTCTaGGAATCTTTGGAGTCATTC +
Preference number: 4 (lower is better)
Translates to: DRHFLSFDYRGPARGDKMQETGF*ESLESF
Trigger: GAATGACTCCAAAGATTCTCAGAACCCTGTCTCTTG...CATCTTATCTCCTCTGGCAGGTCCCCTGTAATCAAAAGAGAGGAAGTGTCTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR TCA 90 bp GTGCAAAAACATGAAATTGTGTCCCAGCCCACCCCTTCTAGCACACGCATTGATATGCCTAATGTACTCTaGCAAATGCTCTTCAGACCT +
Preference number: 4 (lower is better)
Translates to: VQKHEIVSQPTPSSTRIDMPNVL*QMLFRP
Trigger: AGGTCTGAAGAGCATTTGTCAGAGTACATTAGGCAT...ATCAATGCGTGTGCTAGAAGGGGTGGGCTGGGACACAATTTCATGTTTTTGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR TCA 90 bp CACCAAGCATACAACATTAAAGTGTCAATTCGTATCACTAACATTTTCAGGCACTGCCGCCTCACTGGCTaGCCTTCCTATTCAAGAGGG +
Preference number: 4 (lower is better)
Translates to: HQAYNIKVSIRITNIFRHCRLTG*PSYSRG
Trigger: CCCTCTTGAATAGGAAGGTCAGCCAGTGAGGCGGCA...GTGCCTGAAAATGTTAGTGATACGAATTGACACTTTAATGTTGTATGCTTGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR TCA 90 bp GATAGACACTTCCTCTCTTTTGATTACAGGGGACCTGCCAGAGGAGATAAGATGCCCCTTAATAGAGGCTaGCGTTTTAAAGACAGGACA +
Preference number: 4 (lower is better)
Translates to: DRHFLSFDYRGPARGDKMPLNRG*RFKDRT
Trigger: TGTCCTGTCTTTAAAACGTCAGCCTCTATTAAGGGG...CATCTTATCTCCTCTGGCAGGTCCCCTGTAATCAAAAGAGAGGAAGTGTCTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR TCA 90 bp CTGCTTTGCATATCTTGTCATGATTCTCTTGGAGCTATGAATGCTCTGTCCAGTACACTTCCTCTCTTTTaGTTACAGGGGACCTGCCAG +
Preference number: 4 (lower is better)
Translates to: LLCISCHDSLGAMNALSSTLPLF*LQGTCQ
Trigger: CTGGCAGGTCCCCTGTAATCAAAAGAGAGGAAGTGT...ACTGGACAGAGCATTCATAGCTCCAAGAGAATCATGACAAGATATGCAAAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR TCA 90 bp CTCACCATCAGACACCAGGGGAAGGAGACCCTTAAACCGGAGAATTATAATTCAGTTTATGCATGTGTCTaGGAACAGTTGGAACGGACT +
Preference number: 4 (lower is better)
Translates to: LTIRHQGKETLKPENYNSVYACV*EQLERT
Trigger: AGTCCGTTCCAACTGTTCTCAGACACATGCATAAAC...TGAATTATAATTCTCCGGTTTAAGGGTCTCCTTCCCCTGGTGTCTGATGGTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR TCA 90 bp GTGCAAAAACATGAAATTGTGTCCCAGCCCACCCCTTCTAGCACACGCATTGATATACTGTGTTTATCTTaGGGTACACATTGGGCCCAT +
Preference number: 4 (lower is better)
Translates to: VQKHEIVSQPTPSSTRIDILCLS*GTHWAH
Trigger: ATGGGCCCAATGTGTACCTCAAGATAAACACAGTAT...ATCAATGCGTGTGCTAGAAGGGGTGGGCTGGGACACAATTTCATGTTTTTGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR GCA 90 bp GTCCATCCTGCAAGTTATGCTGCCGCCTCACTGGCTGACCTTCCTATTCAAGAGACACTGTTGAAATATTaGACTGGCTCCTTTATATCT +
Preference number: 4 (lower is better)
Translates to: VHPASYAAASLADLPIQETLLKY*TGSFIS
Trigger: AGATATAAAGGAGCCAGTGCAATATTTCAACAGTGT...CTCTTGAATAGGAAGGTCAGCCAGTGAGGCGGCAGCATAACTTGCAGGATGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR GCA 90 bp GTGCAAAAACATGAAATTGTGTCCCAGCCCACCCCTTCTAGCACACGCATTGATCTTCAGTGTCTTCATTaGATTCACCTGAAGCAACCT +
Preference number: 4 (lower is better)
Translates to: VQKHEIVSQPTPSSTRIDLQCLH*IHLKQP
Trigger: AGGTTGCTTCAGGTGAATGCAATGAAGACACTGAAG...ATCAATGCGTGTGCTAGAAGGGGTGGGCTGGGACACAATTTCATGTTTTTGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR GCA 90 bp GGAAGGGCTTCTCGAAAGGGAAGGGCTTTCTCCTTATTATCCCTGCTTTGCATACTTCAGTGTCTTCATTaGATTCACCTGAAGCAACCT +
Preference number: 4 (lower is better)
Translates to: GRASRKGRAFSLLSLLCILQCLH*IHLKQP
Trigger: AGGTTGCTTCAGGTGAATGCAATGAAGACACTGAAG...TATGCAAAGCAGGGATAATAAGGAGAAAGCCCTTCCCTTTCGAGAAGCCCTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR GCA 90 bp TCCCTGCTTTGCATATCTTGTCATGATTCTCTTGGAGCTATGAATGCTCTGTCCTTTTCTCCACAATGTTaGGGATGGTGTGTTCGCCCT +
Preference number: 4 (lower is better)
Translates to: SLLCISCHDSLGAMNALSFSPQC*GWCVRP
Trigger: AGGGCGAACACACCATCCGCAACATTGTGGAGAAAA...GGACAGAGCATTCATAGCTCCAAGAGAATCATGACAAGATATGCAAAGCAGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR GCA 90 bp GATAGACACTTCCTCTCTTTTGATTACAGGGGACCTGCCAGAGGAGATAAGATGAAGTGCAAAGGAAAGTaGATGGGGAGGATCTTGTTG +
Preference number: 4 (lower is better)
Translates to: DRHFLSFDYRGPARGDKMKCKGK*MGRILL
Trigger: CAACAAGATCCTCCCCATGCACTTTCCTTTGCACTT...CATCTTATCTCCTCTGGCAGGTCCCCTGTAATCAAAAGAGAGGAAGTGTCTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR GCA 90 bp TCCCTGCTTTGCATATCTTGTCATGATTCTCTTGGAGCTATGAATGCTCTGTCCGGTTCACCTCACTGTTaGCATGGAGATTGTTGCCAT +
Preference number: 4 (lower is better)
Translates to: SLLCISCHDSLGAMNALSGSPHC*HGDCCH
Trigger: ATGGCAACAATCTCCATGGCAACAGTGAGGTGAACC...GGACAGAGCATTCATAGCTCCAAGAGAATCATGACAAGATATGCAAAGCAGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR GCA 90 bp AAGAGAAAACTTGCAAGATTGATCTGTGAGTGTCTGAATTCTGCCTCCCAACATGCTGCTACTGAATTCTaGAGTGACTGGGCTAGTGGG +
Preference number: 4 (lower is better)
Translates to: KRKLARLICECLNSASQHAATEF*SDWASG
Trigger: CCCACTAGCCCAGTCACTGCAGAATTCAGTAGCAGC...ATGTTGGGAGGCAGAATTCAGACACTCACAGATCAATCTTGCAAGTTTTCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR GCA 90 bp CACCAAGCATACAACATTAAAGTGTCAATTCGTATCACTAACATTTTCAGGCACAAAGGCCACAGTCCCTaGCCTCAAGGAGTCTCTGCG +
Preference number: 4 (lower is better)
Translates to: HQAYNIKVSIRITNIFRHKGHSP*PQGVSA
Trigger: CGCAGAGACTCCTTGAGGGCAGGGACTGTGGCCTTT...GTGCCTGAAAATGTTAGTGATACGAATTGACACTTTAATGTTGTATGCTTGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR GCA 90 bp GTGCAAAAACATGAAATTGTGTCCCAGCCCACCCCTTCTAGCACACGCATTGATGAGAGAGATACTTTCTaGCTCCAACACATTCCAAGT +
Preference number: 4 (lower is better)
Translates to: VQKHEIVSQPTPSSTRIDERDTF*LQHIPS
Trigger: ACTTGGAATGTGTTGGAGGCAGAAAGTATCTCTCTC...ATCAATGCGTGTGCTAGAAGGGGTGGGCTGGGACACAATTTCATGTTTTTGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR GCA 90 bp GGAAGGGCTTCTCGAAAGGGAAGGGCTTTCTCCTTATTATCCCTGCTTTGCATAGGCCATGATGATTTTTaGCATGAATCTAAGGACCCA +
Preference number: 4 (lower is better)
Translates to: GRASRKGRAFSLLSLLCIGHDDF*HESKDP
Trigger: TGGGTCCTTAGATTCATGGCAAAAATCATCATGGCC...TATGCAAAGCAGGGATAATAAGGAGAAAGCCCTTCCCTTTCGAGAAGCCCTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR GCA 90 bp GTCCATCCTGCAAGTTATGCTGCCGCCTCACTGGCTGACCTTCCTATTCAAGAGTGCAACTTCATAAACTaGAATGATATATGTGGGTTG +
Preference number: 4 (lower is better)
Translates to: VHPASYAAASLADLPIQECNFIN*NDICGL
Trigger: CAACCCACATATATCATTGCAGTTTATGAAGTTGCA...CTCTTGAATAGGAAGGTCAGCCAGTGAGGCGGCAGCATAACTTGCAGGATGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CCA 90 bp TTAGCTGAATGGGCAGTTCACTGCAACTTCATAAACTGCAATGATATATGTGGGCCACAATGTTGCGGATaGTGTGTTCGCCCTCTTGCA +
Preference number: 4 (lower is better)
Translates to: LAEWAVHCNFINCNDICGPQCCG*CVRPLA
Trigger: TGCAAGAGGGCGAACACACCATCCGCAACATTGTGG...CCCACATATATCATTGCAGTTTATGAAGTTGCAGTGAACTGCCCATTCAGCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CCA 90 bp TTAGCTGAATGGGCAGTTCACTGCAACTTCATAAACTGCAATGATATATGTGGGCCCTCACGGATGAAGTaGAGGTCGTATGGGTTTCTC +
Preference number: 4 (lower is better)
Translates to: LAEWAVHCNFINCNDICGPSRMK*RSYGFL
Trigger: GAGAAACCCATACGACCTCCACTTCATCCGTGAGGG...CCCACATATATCATTGCAGTTTATGAAGTTGCAGTGAACTGCCCATTCAGCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CCA 90 bp TTAGCTGAATGGGCAGTTCACTGCAACTTCATAAACTGCAATGATATATGTGGGGCAGGAAGTCACTCCTaGTCTGGCTTTCTGATGCTC +
Preference number: 4 (lower is better)
Translates to: LAEWAVHCNFINCNDICGAGSHS*SGFLML
Trigger: GAGCATCAGAAAGCCAGACCAGGAGTGACTTCCTGC...CCCACATATATCATTGCAGTTTATGAAGTTGCAGTGAACTGCCCATTCAGCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CCA 90 bp CTCACCATCAGACACCAGGGGAAGGAGACCCTTAAACCGGAGAATTATAATTCAACTATAACTCCTGCTTaGATCCAGCAGGAAGTCACT +
Preference number: 4 (lower is better)
Translates to: LTIRHQGKETLKPENYNSTITPA*IQQEVT
Trigger: AGTGACTTCCTGCTGGATCCAAGCAGGAGTTATAGT...TGAATTATAATTCTCCGGTTTAAGGGTCTCCTTCCCCTGGTGTCTGATGGTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CCA 90 bp TTAGCTGAATGGGCAGTTCACTGCAACTTCATAAACTGCAATGATATATGTGGGATGCTGCCGCCTCACTaGCTGACCTTCCTATTCAAG +
Preference number: 4 (lower is better)
Translates to: LAEWAVHCNFINCNDICGMLPPH*LTFLFK
Trigger: CTTGAATAGGAAGGTCAGCCAGTGAGGCGGCAGCAT...CCCACATATATCATTGCAGTTTATGAAGTTGCAGTGAACTGCCCATTCAGCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CCA 90 bp GTCCATCCTGCAAGTTATGCTGCCGCCTCACTGGCTGACCTTCCTATTCAAGAGACAAAACTAGACTGGTaGGTCTTGTCTTTCAATTTA +
Preference number: 4 (lower is better)
Translates to: VHPASYAAASLADLPIQETKLDW*VLSFNL
Trigger: TAAATTGAAAGACAAGACCCACCAGTCTAGTTTTGT...CTCTTGAATAGGAAGGTCAGCCAGTGAGGCGGCAGCATAACTTGCAGGATGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR TCA 90 bp CTGCTTTGCATATCTTGTCATGATTCTCTTGGAGCTATGAATGCTCTGTCCAGTCCCCAGTACACAGGGTaGTGTTGTAAACTTCAGTGT +
Preference number: 4 (lower is better)
Translates to: LLCISCHDSLGAMNALSSPQYTG*CCKLQC
Trigger: ACACTGAAGTTTACAACATCACCCTGTGTACTGGGG...ACTGGACAGAGCATTCATAGCTCCAAGAGAATCATGACAAGATATGCAAAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR TCA 90 bp CACCAAGCATACAACATTAAAGTGTCAATTCGTATCACTAACATTTTCAGGCACCAGAGAGTAGCTGGCTaGCTTGGGACAACCAGAGAC +
Preference number: 4 (lower is better)
Translates to: HQAYNIKVSIRITNIFRHQRVAG*LGTTRD
Trigger: GTCTCTGGTTGTCCCAAGTCAGCCAGCTACTCTCTG...GTGCCTGAAAATGTTAGTGATACGAATTGACACTTTAATGTTGTATGCTTGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR TCA 90 bp CTGCTTTGCATATCTTGTCATGATTCTCTTGGAGCTATGAATGCTCTGTCCAGTCTTCGGACAAACCAATaGACCGTAGTGACTTGGACA +
Preference number: 4 (lower is better)
Translates to: LLCISCHDSLGAMNALSSLRTNQ*TVVTWT
Trigger: TGTCCAAGTCACTACGGTTCATTGGTTTGTCCGAAG...ACTGGACAGAGCATTCATAGCTCCAAGAGAATCATGACAAGATATGCAAAGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR TCA 90 bp TCCCTGCTTTGCATATCTTGTCATGATTCTCTTGGAGCTATGAATGCTCTGTCCATTTCTTCCGTTAGCTaGACAAGCAGGTTCCCATCA +
Preference number: 4 (lower is better)
Translates to: SLLCISCHDSLGAMNALSISSVS*TSRFPS
Trigger: TGATGGGAACCTGCTTGTTCAGCTAACGGAAGAAAT...GGACAGAGCATTCATAGCTCCAAGAGAATCATGACAAGATATGCAAAGCAGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR TCA 90 bp GATAGACACTTCCTCTCTTTTGATTACAGGGGACCTGCCAGAGGAGATAAGATGAAGAAGCAATCTGAATaGCAGAGCACAGAACACAGT +
Preference number: 4 (lower is better)
Translates to: DRHFLSFDYRGPARGDKMKKQSE*QSTEHS
Trigger: ACTGTGTTCTGTGCTCTGTCATTCAGATTGCTTCTT...CATCTTATCTCCTCTGGCAGGTCCCCTGTAATCAAAAGAGAGGAAGTGTCTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR TCA 90 bp TCCCTGCTTTGCATATCTTGTCATGATTCTCTTGGAGCTATGAATGCTCTGTCCAGCTCTCGTAAAGCATaGAGTAGGTTGAGAATGCCT +
Preference number: 4 (lower is better)
Translates to: SLLCISCHDSLGAMNALSSSRKA*SRLRMP
Trigger: AGGCATTCTCAACCTACTTCATGCTTTACGAGAGCT...GGACAGAGCATTCATAGCTCCAAGAGAATCATGACAAGATATGCAAAGCAGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR GCA 90 bp CTGCTTTGCATATCTTGTCATGATTCTCTTGGAGCTATGAATGCTCTGTCCAGTTTTTCTCCACAATGTTaGGGATGGTGTGTTCGCCCT +
Preference number: 4 (lower is better)
Translates to: LLCISCHDSLGAMNALSSFSPQC*GWCVRP
Trigger: AGGGCGAACACACCATCCGCAACATTGTGGAGAAAA...ACTGGACAGAGCATTCATAGCTCCAAGAGAATCATGACAAGATATGCAAAGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR GCA 90 bp CTGCTTTGCATATCTTGTCATGATTCTCTTGGAGCTATGAATGCTCTGTCCAGTGGTTCACCTCACTGTTaGCATGGAGATTGTTGCCAT +
Preference number: 4 (lower is better)
Translates to: LLCISCHDSLGAMNALSSGSPHC*HGDCCH
Trigger: ATGGCAACAATCTCCATGGCAACAGTGAGGTGAACC...ACTGGACAGAGCATTCATAGCTCCAAGAGAATCATGACAAGATATGCAAAGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR GCA 90 bp CTGCTTTGCATATCTTGTCATGATTCTCTTGGAGCTATGAATGCTCTGTCCAGTGAGATTTCACATCTGTaGTCTCCAGAGAGTAGCTGG +
Preference number: 4 (lower is better)
Translates to: LLCISCHDSLGAMNALSSEISHL*SPESSW
Trigger: CCAGCTACTCTCTGGAGAGCACAGATGTGAAATCTC...ACTGGACAGAGCATTCATAGCTCCAAGAGAATCATGACAAGATATGCAAAGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR GCA 90 bp CTGCTTTGCATATCTTGTCATGATTCTCTTGGAGCTATGAATGCTCTGTCCAGTCATGGGAGTATTACATaGAAAAACCAGCCCTGCGGT +
Preference number: 4 (lower is better)
Translates to: LLCISCHDSLGAMNALSSHGSIT*KNQPCG
Trigger: ACCGCAGGGCTGGTTTTTGCATGTAATACTCCCATG...ACTGGACAGAGCATTCATAGCTCCAAGAGAATCATGACAAGATATGCAAAGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR GCA 90 bp CTGCTTTGCATATCTTGTCATGATTCTCTTGGAGCTATGAATGCTCTGTCCAGTTCTTGGAGCTATGAATaGTCTGTCCAGTCAGGACAC +
Preference number: 4 (lower is better)
Translates to: LLCISCHDSLGAMNALSSSWSYE*SVQSGH
Trigger: GTGTCCTGACTGGACAGAGCATTCATAGCTCCAAGA...ACTGGACAGAGCATTCATAGCTCCAAGAGAATCATGACAAGATATGCAAAGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR GCA 90 bp TGGGGCATTATCAGTAAGGTAGATTTTTGTCAACAAAGGATTGATGACTGTGAACCGGGAACTCATTCCTaGGCAGTAGCACAACCTGTC +
Preference number: 4 (lower is better)
Translates to: WGIISKVDFCQQRIDDCEPGTHS*AVAQPV
Trigger: GACAGGTTGTGCTACTGCGCAGGAATGAGTTCCCGG...TTCACAGTCATCAATCCTTTGTTGACAAAAATCTACCTTACTGATAATGCCCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583696.1
CDS-3UTR CCA 90 bp TCCCTGCTTTGCATATCTTGTCATGATTCTCTTGGAGCTATGAATGCTCTGTCCAATCTGCCCTTGCACTaGAATGGAAGGCTAATGCTT +
Preference number: 4 (lower is better)
Translates to: SLLCISCHDSLGAMNALSNLPLH*NGRLML
Trigger: AAGCATTAGCCTTCCATTCCAGTGCAAGGGCAGATT...GGACAGAGCATTCATAGCTCCAAGAGAATCATGACAAGATATGCAAAGCAGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CCA 90 bp CTGCTTTGCATATCTTGTCATGATTCTCTTGGAGCTATGAATGCTCTGTCCAGTAAGTCACTCCTGGTCTaGCTTTCTGATGCTCCTGAA +
Preference number: 4 (lower is better)
Translates to: LLCISCHDSLGAMNALSSKSLLV*LSDAPE
Trigger: TTCAGGAGCATCAGAAAGCCAGACCAGGAGTGACTT...ACTGGACAGAGCATTCATAGCTCCAAGAGAATCATGACAAGATATGCAAAGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CCA 90 bp TTAGCTGAATGGGCAGTTCACTGCAACTTCATAAACTGCAATGATATATGTGGGTGGGCAGTTTCTCTTTaGTGTGCCTGGCGTCTTTTG +
Preference number: 4 (lower is better)
Translates to: LAEWAVHCNFINCNDICGWAVSL*CAWRLL
Trigger: CAAAAGACGCCAGGCACACCAAAGAGAAACTGCCCA...CCCACATATATCATTGCAGTTTATGAAGTTGCAGTGAACTGCCCATTCAGCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CCA 90 bp CTCACCATCAGACACCAGGGGAAGGAGACCCTTAAACCGGAGAATTATAATTCATGCAATTTAGCTGAATaGGCAGTTCACTGCAACTTC +
Preference number: 4 (lower is better)
Translates to: LTIRHQGKETLKPENYNSCNLAE*AVHCNF
Trigger: GAAGTTGCAGTGAACTGCCCATTCAGCTAAATTGCA...TGAATTATAATTCTCCGGTTTAAGGGTCTCCTTCCCCTGGTGTCTGATGGTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CCA 90 bp AAGAGAAAACTTGCAAGATTGATCTGTGAGTGTCTGAATTCTGCCTCCCAACATTCTCAGGGAGCTGTATaGATAACATGCAGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: KRKLARLICECLNSASQHSQGAV*ITCRWL
Trigger: CAGCCACCTGCATGTTATCCATACAGCTCCCTGAGA...ATGTTGGGAGGCAGAATTCAGACACTCACAGATCAATCTTGCAAGTTTTCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR TCA 90 bp CACCAAGCATACAACATTAAAGTGTCAATTCGTATCACTAACATTTTCAGGCACCCTGCCCCATTAGAGTaGGTTCATCCCCAGTACACA +
Preference number: 4 (lower is better)
Translates to: HQAYNIKVSIRITNIFRHPAPLE*VHPQYT
Trigger: TGTGTACTGGGGATGAACTCACTCTAATGGGGCAGG...GTGCCTGAAAATGTTAGTGATACGAATTGACACTTTAATGTTGTATGCTTGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR TCA 90 bp GATAGACACTTCCTCTCTTTTGATTACAGGGGACCTGCCAGAGGAGATAAGATGGATTGTGTTGAGTCGTaGCTTTTCCTTGAATGTCTT +
Preference number: 4 (lower is better)
Translates to: DRHFLSFDYRGPARGDKMDCVES*LFLECL
Trigger: AAGACATTCAAGGAAAAGTCACGACTCAACACAATC...CATCTTATCTCCTCTGGCAGGTCCCCTGTAATCAAAAGAGAGGAAGTGTCTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR TCA 90 bp ATAATTCAACAGAAACTGTCATTTCCCCAGACATCATGGGAGTATTACATGCAAATAATGGTTAGGCCATaGGAGCCGAGAGGACACAGC +
Preference number: 4 (lower is better)
Translates to: IIQQKLSFPQTSWEYYMQIMVRP*EPRGHS
Trigger: GCTGTGTCCTCTCGGCTCTCATGGCCTAACCATTAT...TTGCATGTAATACTCCCATGATGTCTGGGGAAATGACAGTTTCTGTTGAATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR TCA 90 bp CACCAAGCATACAACATTAAAGTGTCAATTCGTATCACTAACATTTTCAGGCACAAACCAGCCCTGCGGTaGGTGGGCTTAAACTCAAAC +
Preference number: 4 (lower is better)
Translates to: HQAYNIKVSIRITNIFRHKPALR*VGLNSN
Trigger: GTTTGAGTTTAAGCCCACTCACCGCAGGGCTGGTTT...GTGCCTGAAAATGTTAGTGATACGAATTGACACTTTAATGTTGTATGCTTGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR TCA 90 bp AAGAGAAAACTTGCAAGATTGATCTGTGAGTGTCTGAATTCTGCCTCCCAACATAGAGGTGCTCCAGTGTaGGAATTTTACAGGGTACTC +
Preference number: 4 (lower is better)
Translates to: KRKLARLICECLNSASQHRGAPV*EFYRVL
Trigger: GAGTACCCTGTAAAATTCTCACACTGGAGCACCTCT...ATGTTGGGAGGCAGAATTCAGACACTCACAGATCAATCTTGCAAGTTTTCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR TCA 90 bp TCCCTGCTTTGCATATCTTGTCATGATTCTCTTGGAGCTATGAATGCTCTGTCCTCATTGAGTTATCTGTaGCTTTTGAAGAGGTGCTCC +
Preference number: 4 (lower is better)
Translates to: SLLCISCHDSLGAMNALSSLSYL*LLKRCS
Trigger: GGAGCACCTCTTCAAAAGTCACAGATAACTCAATGA...GGACAGAGCATTCATAGCTCCAAGAGAATCATGACAAGATATGCAAAGCAGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR TCA 90 bp CACCAAGCATACAACATTAAAGTGTCAATTCGTATCACTAACATTTTCAGGCACAGGTCTCATGTCCTGTaGGTGCAGTACCAGCACTTC +
Preference number: 4 (lower is better)
Translates to: HQAYNIKVSIRITNIFRHRSHVL*VQYQHF
Trigger: GAAGTGCTGGTACTGCACTCACAGGACATGAGACCT...GTGCCTGAAAATGTTAGTGATACGAATTGACACTTTAATGTTGTATGCTTGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR TCA 90 bp GGAAGGGCTTCTCGAAAGGGAAGGGCTTTCTCCTTATTATCCCTGCTTTGCATATTGCATATCTTGTCATaGTTCTCTTGGAGCTATGAA +
Preference number: 4 (lower is better)
Translates to: GRASRKGRAFSLLSLLCILHILS*FSWSYE
Trigger: TTCATAGCTCCAAGAGAATCATGACAAGATATGCAA...TATGCAAAGCAGGGATAATAAGGAGAAAGCCCTTCCCTTTCGAGAAGCCCTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR TCA 90 bp TCCCTGCTTTGCATATCTTGTCATGATTCTCTTGGAGCTATGAATGCTCTGTCCATACTGTGTTTATCTTaGGGTACACATTGGGCCCAT +
Preference number: 4 (lower is better)
Translates to: SLLCISCHDSLGAMNALSILCLS*GTHWAH
Trigger: ATGGGCCCAATGTGTACCTCAAGATAAACACAGTAT...GGACAGAGCATTCATAGCTCCAAGAGAATCATGACAAGATATGCAAAGCAGGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR GCA 90 bp CTGCTTTGCATATCTTGTCATGATTCTCTTGGAGCTATGAATGCTCTGTCCAGTGGTAACTATAACTCCTaGTTGGATCCAGCAGGAAGT +
Preference number: 4 (lower is better)
Translates to: LLCISCHDSLGAMNALSSGNYNS*LDPAGS
Trigger: ACTTCCTGCTGGATCCAAGCAGGAGTTATAGTTACC...ACTGGACAGAGCATTCATAGCTCCAAGAGAATCATGACAAGATATGCAAAGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR GCA 90 bp GATAGACACTTCCTCTCTTTTGATTACAGGGGACCTGCCAGAGGAGATAAGATGATCAAAATCAAAAGGTaGTGGGCAGTTTCTCTTTGG +
Preference number: 4 (lower is better)
Translates to: DRHFLSFDYRGPARGDKMIKIKR*WAVSLW
Trigger: CCAAAGAGAAACTGCCCAGCACCTTTTGATTTTGAT...CATCTTATCTCCTCTGGCAGGTCCCCTGTAATCAAAAGAGAGGAAGTGTCTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR GCA 90 bp CACCAAGCATACAACATTAAAGTGTCAATTCGTATCACTAACATTTTCAGGCACGGGCATGACGTACTCTaGTTTGTCACACCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: HQAYNIKVSIRITNIFRHGHDVL*FVTPAA
Trigger: TGCAGCTGGTGTGACAAAGCAGAGTACGTCATGCCC...GTGCCTGAAAATGTTAGTGATACGAATTGACACTTTAATGTTGTATGCTTGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR GCA 90 bp GATAGACACTTCCTCTCTTTTGATTACAGGGGACCTGCCAGAGGAGATAAGATGGCAGAGAAGATGTCCTaGATGCCCTTTTTAACAAAA +
Preference number: 4 (lower is better)
Translates to: DRHFLSFDYRGPARGDKMAEKMS*MPFLTK
Trigger: TTTTGTTAAAAAGGGCATGCAGGACATCTTCTCTGC...CATCTTATCTCCTCTGGCAGGTCCCCTGTAATCAAAAGAGAGGAAGTGTCTATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR GCA 90 bp AAGAGAAAACTTGCAAGATTGATCTGTGAGTGTCTGAATTCTGCCTCCCAACATATCAGTTTTGTTCCATaGTGGCCGGGGGTTATTTGG +
Preference number: 4 (lower is better)
Translates to: KRKLARLICECLNSASQHISFVP*WPGVIW
Trigger: CCAAATAACCCCCGGCCAGCATGGAACAAAACTGAT...ATGTTGGGAGGCAGAATTCAGACACTCACAGATCAATCTTGCAAGTTTTCTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR GCA 90 bp TCCCTGCTTTGCATATCTTGTCATGATTCTCTTGGAGCTATGAATGCTCTGTCCGAGAGAGATACTTTCTaGCTCCAACACATTCCAAGT +
Preference number: 4 (lower is better)
Translates to: SLLCISCHDSLGAMNALSERDTF*LQHIPS
Trigger: ACTTGGAATGTGTTGGAGGCAGAAAGTATCTCTCTC...GGACAGAGCATTCATAGCTCCAAGAGAATCATGACAAGATATGCAAAGCAGGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CCA 90 bp ATAATTCAACAGAAACTGTCATTTCCCCAGACATCATGGGAGTATTACATGCAACCCTCACGGATGAAGTaGAGGTCGTATGGGTTTCTC +
Preference number: 4 (lower is better)
Translates to: IIQQKLSFPQTSWEYYMQPSRMK*RSYGFL
Trigger: GAGAAACCCATACGACCTCCACTTCATCCGTGAGGG...TTGCATGTAATACTCCCATGATGTCTGGGGAAATGACAGTTTCTGTTGAATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CCA 90 bp TTAGCTGAATGGGCAGTTCACTGCAACTTCATAAACTGCAATGATATATGTGGGGCAAAGGAAAGTGCATaGGGAGGATCTTGTTGTTCC +
Preference number: 4 (lower is better)
Translates to: LAEWAVHCNFINCNDICGAKESA*GGSCCS
Trigger: GGAACAACAAGATCCTCCCCATGCACTTTCCTTTGC...CCCACATATATCATTGCAGTTTATGAAGTTGCAGTGAACTGCCCATTCAGCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CCA 90 bp AAGAGAAAACTTGCAAGATTGATCTGTGAGTGTCTGAATTCTGCCTCCCAACATTTCTTCACTAGCTTCTaGGAAAAGGTAGTCGCTCCC +
Preference number: 4 (lower is better)
Translates to: KRKLARLICECLNSASQHFFTSF*EKVVAP
Trigger: GGGAGCGACTACCTTTTCCCAGAAGCTAGTGAAGAA...ATGTTGGGAGGCAGAATTCAGACACTCACAGATCAATCTTGCAAGTTTTCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CCA 90 bp AAGAGAAAACTTGCAAGATTGATCTGTGAGTGTCTGAATTCTGCCTCCCAACATAAGTCACTCCTGGTCTaGCTTTCTGATGCTCCTGAA +
Preference number: 4 (lower is better)
Translates to: KRKLARLICECLNSASQHKSLLV*LSDAPE
Trigger: TTCAGGAGCATCAGAAAGCCAGACCAGGAGTGACTT...ATGTTGGGAGGCAGAATTCAGACACTCACAGATCAATCTTGCAAGTTTTCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CCA 90 bp GTGCAAAAACATGAAATTGTGTCCCAGCCCACCCCTTCTAGCACACGCATTGATTTTTTAACAAAATACTaGTCCTCCGAGAGATCTGGT +
Preference number: 4 (lower is better)
Translates to: VQKHEIVSQPTPSSTRIDFLTKY*SSERSG
Trigger: ACCAGATCTCTCGGAGGACCAGTATTTTGTTAAAAA...ATCAATGCGTGTGCTAGAAGGGGTGGGCTGGGACACAATTTCATGTTTTTGCAC
43% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CCA 90 bp TTAGCTGAATGGGCAGTTCACTGCAACTTCATAAACTGCAATGATATATGTGGGAGTTTTGTTCCATGCTaGCCGGGGGTTATTTGGCTA +
Preference number: 4 (lower is better)
Translates to: LAEWAVHCNFINCNDICGSFVPC*PGVIWL
Trigger: TAGCCAAATAACCCCCGGCCAGCATGGAACAAAACT...CCCACATATATCATTGCAGTTTATGAAGTTGCAGTGAACTGCCCATTCAGCTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CCA 90 bp AAGAGAAAACTTGCAAGATTGATCTGTGAGTGTCTGAATTCTGCCTCCCAACATGAAGGGTTCTGTGTGTaGATCTCTGGGCATCACTTT +
Preference number: 4 (lower is better)
Translates to: KRKLARLICECLNSASQHEGFCV*ISGHHF
Trigger: AAAGTGATGCCCAGAGATCCACACACAGAACCCTTC...ATGTTGGGAGGCAGAATTCAGACACTCACAGATCAATCTTGCAAGTTTTCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CCA 90 bp AAGAGAAAACTTGCAAGATTGATCTGTGAGTGTCTGAATTCTGCCTCCCAACATTGGATAACATGCAGGTaGCTGTGGAATGTGAGCAGA +
Preference number: 4 (lower is better)
Translates to: KRKLARLICECLNSASQHWITCR*LWNVSR
Trigger: TCTGCTCACATTCCACAGCCACCTGCATGTTATCCA...ATGTTGGGAGGCAGAATTCAGACACTCACAGATCAATCTTGCAAGTTTTCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR TCA 90 bp ATAATTCAACAGAAACTGTCATTTCCCCAGACATCATGGGAGTATTACATGCAACCTCCTCCACACTGTTaGAATATTGCACTGGCTCCT +
Preference number: 4 (lower is better)
Translates to: IIQQKLSFPQTSWEYYMQPPPHC*NIALAP
Trigger: AGGAGCCAGTGCAATATTTCAACAGTGTGGAGGAGG...TTGCATGTAATACTCCCATGATGTCTGGGGAAATGACAGTTTCTGTTGAATTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR TCA 90 bp ATAATTCAACAGAAACTGTCATTTCCCCAGACATCATGGGAGTATTACATGCAAATCACGGACAGCCCGTaGATACTCATCGATGTCGAA +
Preference number: 4 (lower is better)
Translates to: IIQQKLSFPQTSWEYYMQITDSP*ILIDVE
Trigger: TTCGACATCGATGAGTATTCACGGGCTGTCCGTGAT...TTGCATGTAATACTCCCATGATGTCTGGGGAAATGACAGTTTCTGTTGAATTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR TCA 90 bp ATAATTCAACAGAAACTGTCATTTCCCCAGACATCATGGGAGTATTACATGCAAAAAGGCCGGTGCGTCTaGTTTCTCAGCTCTCGTAAA +
Preference number: 4 (lower is better)
Translates to: IIQQKLSFPQTSWEYYMQKGRCV*FLSSRK
Trigger: TTTACGAGAGCTGAGAAATCAGACGCACCGGCCTTT...TTGCATGTAATACTCCCATGATGTCTGGGGAAATGACAGTTTCTGTTGAATTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR TCA 90 bp ATAATTCAACAGAAACTGTCATTTCCCCAGACATCATGGGAGTATTACATGCAAGGTGGCTGTGGAATGTaGGCAGAGACTGTTTATGCA +
Preference number: 4 (lower is better)
Translates to: IIQQKLSFPQTSWEYYMQGGCGM*AETVYA
Trigger: TGCATAAACAGTCTCTGCTCACATTCCACAGCCACC...TTGCATGTAATACTCCCATGATGTCTGGGGAAATGACAGTTTCTGTTGAATTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR TCA 90 bp TCCCTGCTTTGCATATCTTGTCATGATTCTCTTGGAGCTATGAATGCTCTGTCCCAGTGTGATTTAACATaGTGTAACCATGAGAATCCC +
Preference number: 4 (lower is better)
Translates to: SLLCISCHDSLGAMNALSQCDLT*CNHENP
Trigger: GGGATTCTCATGGTTACATCATGTTAAATCACACTG...GGACAGAGCATTCATAGCTCCAAGAGAATCATGACAAGATATGCAAAGCAGGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR GCA 90 bp GTGCAAAAACATGAAATTGTGTCCCAGCCCACCCCTTCTAGCACACGCATTGATCTACTTCACATAATTTaGACTCTAGGCCTTTTATTC +
Preference number: 4 (lower is better)
Translates to: VQKHEIVSQPTPSSTRIDLLHII*TLGLLF
Trigger: GAATAAAAGGCCTAGAGTGCAAATTATGTGAAGTAG...ATCAATGCGTGTGCTAGAAGGGGTGGGCTGGGACACAATTTCATGTTTTTGCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CCA 90 bp TCCCTGCTTTGCATATCTTGTCATGATTCTCTTGGAGCTATGAATGCTCTGTCCGTTGAAATATTGCACTaGCTCCTTTATATCTCGGTC +
Preference number: 4 (lower is better)
Translates to: SLLCISCHDSLGAMNALSVEILH*LLYISV
Trigger: GACCGAGATATAAAGGAGCCAGTGCAATATTTCAAC...GGACAGAGCATTCATAGCTCCAAGAGAATCATGACAAGATATGCAAAGCAGGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CCA 90 bp CACCAAGCATACAACATTAAAGTGTCAATTCGTATCACTAACATTTTCAGGCACAGCACCGACCCTTCTTaGGGCTCTTGCATTCTTCAT +
Preference number: 4 (lower is better)
Translates to: HQAYNIKVSIRITNIFRHSTDPS*GSCILH
Trigger: ATGAAGAATGCAAGAGCCCCAAGAAGGGTCGGTGCT...GTGCCTGAAAATGTTAGTGATACGAATTGACACTTTAATGTTGTATGCTTGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CCA 90 bp ATAATTCAACAGAAACTGTCATTTCCCCAGACATCATGGGAGTATTACATGCAATGGGCAGTTTCTCTTTaGTGTGCCTGGCGTCTTTTG +
Preference number: 4 (lower is better)
Translates to: IIQQKLSFPQTSWEYYMQWAVSL*CAWRLL
Trigger: CAAAAGACGCCAGGCACACCAAAGAGAAACTGCCCA...TTGCATGTAATACTCCCATGATGTCTGGGGAAATGACAGTTTCTGTTGAATTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CCA 90 bp GATAGACACTTCCTCTCTTTTGATTACAGGGGACCTGCCAGAGGAGATAAGATGTTTCCCCAGACATCATaGGAGTATTACATGCAAAAA +
Preference number: 4 (lower is better)
Translates to: DRHFLSFDYRGPARGDKMFPQTS*EYYMQK
Trigger: TTTTTGCATGTAATACTCCCATGATGTCTGGGGAAA...CATCTTATCTCCTCTGGCAGGTCCCCTGTAATCAAAAGAGAGGAAGTGTCTATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR TCA 90 bp TTAGCTGAATGGGCAGTTCACTGCAACTTCATAAACTGCAATGATATATGTGGGTTTAGTGCAAAAACATaGAATTGTGTCCCAGCCCAC +
Preference number: 4 (lower is better)
Translates to: LAEWAVHCNFINCNDICGFSAKT*NCVPAH
Trigger: GTGGGCTGGGACACAATTTCATGTTTTTGCACTAAA...CCCACATATATCATTGCAGTTTATGAAGTTGCAGTGAACTGCCCATTCAGCTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR TCA 90 bp CACCAAGCATACAACATTAAAGTGTCAATTCGTATCACTAACATTTTCAGGCACAGAGGTGCTCCAGTGTaGGAATTTTACAGGGTACTC +
Preference number: 4 (lower is better)
Translates to: HQAYNIKVSIRITNIFRHRGAPV*EFYRVL
Trigger: GAGTACCCTGTAAAATTCTCACACTGGAGCACCTCT...GTGCCTGAAAATGTTAGTGATACGAATTGACACTTTAATGTTGTATGCTTGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR TCA 90 bp ATAATTCAACAGAAACTGTCATTTCCCCAGACATCATGGGAGTATTACATGCAATTCTGCCTCCCAACATaGGTCAGGTCCACATTATAC +
Preference number: 4 (lower is better)
Translates to: IIQQKLSFPQTSWEYYMQFCLPT*VRSTLY
Trigger: GTATAATGTGGACCTGACTCATGTTGGGAGGCAGAA...TTGCATGTAATACTCCCATGATGTCTGGGGAAATGACAGTTTCTGTTGAATTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR TCA 90 bp GGTTGGGGCATTATCAGTAAGGTAGATTTTTGTCAACAAAGGATTGATGACTGTGGGAGATGCATAGTGTaGGGTAATATAGCACAGTCT +
Preference number: 4 (lower is better)
Translates to: GWGIISKVDFCQQRIDDCGRCIV*GNIAQS
Trigger: AGACTGTGCTATATTACCTCACACTATGCATCTCCC...ACAGTCATCAATCCTTTGTTGACAAAAATCTACCTTACTGATAATGCCCCAACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583696.1
CDS-3UTR GCA 90 bp CTGCTTTGCATATCTTGTCATGATTCTCTTGGAGCTATGAATGCTCTGTCCAGTATCAAAATCAAAAGGTaGTGGGCAGTTTCTCTTTGG +
Preference number: 4 (lower is better)
Translates to: LLCISCHDSLGAMNALSSIKIKR*WAVSLW
Trigger: CCAAAGAGAAACTGCCCAGCACCTTTTGATTTTGAT...ACTGGACAGAGCATTCATAGCTCCAAGAGAATCATGACAAGATATGCAAAGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR GCA 90 bp AAGAGAAAACTTGCAAGATTGATCTGTGAGTGTCTGAATTCTGCCTCCCAACATCTTTGTCACACCAGCTaGAAGAGATTTCACATCTGT +
Preference number: 4 (lower is better)
Translates to: KRKLARLICECLNSASQHLCHTS*KRFHIC
Trigger: ACAGATGTGAAATCTCTTGCAGCTGGTGTGACAAAG...ATGTTGGGAGGCAGAATTCAGACACTCACAGATCAATCTTGCAAGTTTTCTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR GCA 90 bp TTAGCTGAATGGGCAGTTCACTGCAACTTCATAAACTGCAATGATATATGTGGGCCTCACACAGAAGGATaGTTTCAAAACACGAAAGCT +
Preference number: 4 (lower is better)
Translates to: LAEWAVHCNFINCNDICGPHTEG*FQNTKA
Trigger: AGCTTTCGTGTTTTGAAAGCATCCTTCTGTGTGAGG...CCCACATATATCATTGCAGTTTATGAAGTTGCAGTGAACTGCCCATTCAGCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR GCA 90 bp CACCAAGCATACAACATTAAAGTGTCAATTCGTATCACTAACATTTTCAGGCACGCCTTTTATTCTTCTTaGTCAAGCAGCCTGGTGCCT +
Preference number: 4 (lower is better)
Translates to: HQAYNIKVSIRITNIFRHAFYSS*SSSLVP
Trigger: AGGCACCAGGCTGCTTGAGCAAGAAGAATAAAAGGC...GTGCCTGAAAATGTTAGTGATACGAATTGACACTTTAATGTTGTATGCTTGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CCA 90 bp CACCAAGCATACAACATTAAAGTGTCAATTCGTATCACTAACATTTTCAGGCACGCAAAGGAAAGTGCATaGGGAGGATCTTGTTGTTCC +
Preference number: 4 (lower is better)
Translates to: HQAYNIKVSIRITNIFRHAKESA*GGSCCS
Trigger: GGAACAACAAGATCCTCCCCATGCACTTTCCTTTGC...GTGCCTGAAAATGTTAGTGATACGAATTGACACTTTAATGTTGTATGCTTGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR TCA 90 bp CACCAAGCATACAACATTAAAGTGTCAATTCGTATCACTAACATTTTCAGGCACCTTGTTCCAGCAGCTTaGATTGCCCTGCATAATGTA +
Preference number: 4 (lower is better)
Translates to: HQAYNIKVSIRITNIFRHLVPAA*IALHNV
Trigger: TACATTATGCAGGGCAATTCAAGCTGCTGGAACAAG...GTGCCTGAAAATGTTAGTGATACGAATTGACACTTTAATGTTGTATGCTTGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR TCA 90 bp ATAATTCAACAGAAACTGTCATTTCCCCAGACATCATGGGAGTATTACATGCAACTTGTTCCAGCAGCTTaGATTGCCCTGCATAATGTA +
Preference number: 4 (lower is better)
Translates to: IIQQKLSFPQTSWEYYMQLVPAA*IALHNV
Trigger: TACATTATGCAGGGCAATTCAAGCTGCTGGAACAAG...TTGCATGTAATACTCCCATGATGTCTGGGGAAATGACAGTTTCTGTTGAATTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR TCA 90 bp ATAATTCAACAGAAACTGTCATTTCCCCAGACATCATGGGAGTATTACATGCAAAGCTCTCGTAAAGCATaGAGTAGGTTGAGAATGCCT +
Preference number: 4 (lower is better)
Translates to: IIQQKLSFPQTSWEYYMQSSRKA*SRLRMP
Trigger: AGGCATTCTCAACCTACTTCATGCTTTACGAGAGCT...TTGCATGTAATACTCCCATGATGTCTGGGGAAATGACAGTTTCTGTTGAATTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR TCA 90 bp ATAATTCAACAGAAACTGTCATTTCCCCAGACATCATGGGAGTATTACATGCAAACACTGCAATTTAGCTaGATGGGCAGTTCACTGCAA +
Preference number: 4 (lower is better)
Translates to: IIQQKLSFPQTSWEYYMQTLQFS*MGSSLQ
Trigger: TTGCAGTGAACTGCCCATTCAGCTAAATTGCAGTGT...TTGCATGTAATACTCCCATGATGTCTGGGGAAATGACAGTTTCTGTTGAATTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR GCA 90 bp TCCCTGCTTTGCATATCTTGTCATGATTCTCTTGGAGCTATGAATGCTCTGTCCACACTGTTGAAATATTaGACTGGCTCCTTTATATCT +
Preference number: 4 (lower is better)
Translates to: SLLCISCHDSLGAMNALSTLLKY*TGSFIS
Trigger: AGATATAAAGGAGCCAGTGCAATATTTCAACAGTGT...GGACAGAGCATTCATAGCTCCAAGAGAATCATGACAAGATATGCAAAGCAGGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR GCA 90 bp AAGAGAAAACTTGCAAGATTGATCTGTGAGTGTCTGAATTCTGCCTCCCAACATGCAGAGAAGATGTCCTaGATGCCCTTTTTAACAAAA +
Preference number: 4 (lower is better)
Translates to: KRKLARLICECLNSASQHAEKMS*MPFLTK
Trigger: TTTTGTTAAAAAGGGCATGCAGGACATCTTCTCTGC...ATGTTGGGAGGCAGAATTCAGACACTCACAGATCAATCTTGCAAGTTTTCTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR GCA 90 bp CTGCTTTGCATATCTTGTCATGATTCTCTTGGAGCTATGAATGCTCTGTCCAGTTTGCCAATGAAAACTTaGAGCTTAGTAACTGCATCT +
Preference number: 4 (lower is better)
Translates to: LLCISCHDSLGAMNALSSLPMKT*SLVTAS
Trigger: AGATGCAGTTACTAAGCTGCAAGTTTTCATTGGCAA...ACTGGACAGAGCATTCATAGCTCCAAGAGAATCATGACAAGATATGCAAAGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CCA 90 bp CACCAAGCATACAACATTAAAGTGTCAATTCGTATCACTAACATTTTCAGGCACAATCTGCCCTTGCACTaGAATGGAAGGCTAATGCTT +
Preference number: 4 (lower is better)
Translates to: HQAYNIKVSIRITNIFRHNLPLH*NGRLML
Trigger: AAGCATTAGCCTTCCATTCCAGTGCAAGGGCAGATT...GTGCCTGAAAATGTTAGTGATACGAATTGACACTTTAATGTTGTATGCTTGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CCA 90 bp ATAATTCAACAGAAACTGTCATTTCCCCAGACATCATGGGAGTATTACATGCAAAAACCACCACCGTCTTaGTCTGGATGTTCACAAACT +
Preference number: 4 (lower is better)
Translates to: IIQQKLSFPQTSWEYYMQKPPPS*SGCSQT
Trigger: AGTTTGTGAACATCCAGACCAAGACGGTGGTGGTTT...TTGCATGTAATACTCCCATGATGTCTGGGGAAATGACAGTTTCTGTTGAATTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CCA 90 bp ATAATTCAACAGAAACTGTCATTTCCCCAGACATCATGGGAGTATTACATGCAAACTATAACTCCTGCTTaGATCCAGCAGGAAGTCACT +
Preference number: 4 (lower is better)
Translates to: IIQQKLSFPQTSWEYYMQTITPA*IQQEVT
Trigger: AGTGACTTCCTGCTGGATCCAAGCAGGAGTTATAGT...TTGCATGTAATACTCCCATGATGTCTGGGGAAATGACAGTTTCTGTTGAATTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CCA 90 bp AAGAGAAAACTTGCAAGATTGATCTGTGAGTGTCTGAATTCTGCCTCCCAACATGGTTCTGAGAATCTTTaGAGTCATTCTGTCCACTAT +
Preference number: 4 (lower is better)
Translates to: KRKLARLICECLNSASQHGSENL*SHSVHY
Trigger: ATAGTGGACAGAATGACTCCAAAGATTCTCAGAACC...ATGTTGGGAGGCAGAATTCAGACACTCACAGATCAATCTTGCAAGTTTTCTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CCA 90 bp CTGCTTTGCATATCTTGTCATGATTCTCTTGGAGCTATGAATGCTCTGTCCAGTTCTACAAAACTAGACTaGTGGGTCTTGTCTTTCAAT +
Preference number: 4 (lower is better)
Translates to: LLCISCHDSLGAMNALSSSTKLD*WVLSFN
Trigger: ATTGAAAGACAAGACCCACCAGTCTAGTTTTGTAGA...ACTGGACAGAGCATTCATAGCTCCAAGAGAATCATGACAAGATATGCAAAGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR TCA 90 bp ATAATTCAACAGAAACTGTCATTTCCCCAGACATCATGGGAGTATTACATGCAATTCATTGCATTCACCTaGAGCAACCTTCACGTTGAA +
Preference number: 4 (lower is better)
Translates to: IIQQKLSFPQTSWEYYMQFIAFT*SNLHVE
Trigger: TTCAACGTGAAGGTTGCTTCAGGTGAATGCAATGAA...TTGCATGTAATACTCCCATGATGTCTGGGGAAATGACAGTTTCTGTTGAATTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR TCA 90 bp CACCAAGCATACAACATTAAAGTGTCAATTCGTATCACTAACATTTTCAGGCACTTTAGTGCAAAAACATaGAATTGTGTCCCAGCCCAC +
Preference number: 4 (lower is better)
Translates to: HQAYNIKVSIRITNIFRHFSAKT*NCVPAH
Trigger: GTGGGCTGGGACACAATTTCATGTTTTTGCACTAAA...GTGCCTGAAAATGTTAGTGATACGAATTGACACTTTAATGTTGTATGCTTGGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR TCA 90 bp CACCAAGCATACAACATTAAAGTGTCAATTCGTATCACTAACATTTTCAGGCACATGCCTAATGTACTCTaGCAAATGCTCTTCAGACCT +
Preference number: 4 (lower is better)
Translates to: HQAYNIKVSIRITNIFRHMPNVL*QMLFRP
Trigger: AGGTCTGAAGAGCATTTGTCAGAGTACATTAGGCAT...GTGCCTGAAAATGTTAGTGATACGAATTGACACTTTAATGTTGTATGCTTGGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR TCA 90 bp CACCAAGCATACAACATTAAAGTGTCAATTCGTATCACTAACATTTTCAGGCACAACAACACTAGGCAATaGGAGAGATACTTTCTGCCT +
Preference number: 4 (lower is better)
Translates to: HQAYNIKVSIRITNIFRHNNTRQ*ERYFLP
Trigger: AGGCAGAAAGTATCTCTCTCATTGCCTAGTGTTGTT...GTGCCTGAAAATGTTAGTGATACGAATTGACACTTTAATGTTGTATGCTTGGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR TCA 90 bp TTAGCTGAATGGGCAGTTCACTGCAACTTCATAAACTGCAATGATATATGTGGGTTGCATATCTTGTCATaGTTCTCTTGGAGCTATGAA +
Preference number: 4 (lower is better)
Translates to: LAEWAVHCNFINCNDICGLHILS*FSWSYE
Trigger: TTCATAGCTCCAAGAGAATCATGACAAGATATGCAA...CCCACATATATCATTGCAGTTTATGAAGTTGCAGTGAACTGCCCATTCAGCTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR TCA 90 bp AAGAGAAAACTTGCAAGATTGATCTGTGAGTGTCTGAATTCTGCCTCCCAACATTGTTGTATTTCGACATaGGACAAGAATAAACACTGC +
Preference number: 4 (lower is better)
Translates to: KRKLARLICECLNSASQHCCIST*DKNKHC
Trigger: GCAGTGTTTATTCTTGTCTCATGTCGAAATACAACA...ATGTTGGGAGGCAGAATTCAGACACTCACAGATCAATCTTGCAAGTTTTCTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR GCA 90 bp TTAGCTGAATGGGCAGTTCACTGCAACTTCATAAACTGCAATGATATATGTGGGCAGCCATTAATGAATTaGATTATCTTCTTCACCTGC +
Preference number: 4 (lower is better)
Translates to: LAEWAVHCNFINCNDICGQPLMN*IIFFTC
Trigger: GCAGGTGAAGAAGATAATGCAATTCATTAATGGCTG...CCCACATATATCATTGCAGTTTATGAAGTTGCAGTGAACTGCCCATTCAGCTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR GCA 90 bp AAGAGAAAACTTGCAAGATTGATCTGTGAGTGTCTGAATTCTGCCTCCCAACATCAGCCATTAATGAATTaGATTATCTTCTTCACCTGC +
Preference number: 4 (lower is better)
Translates to: KRKLARLICECLNSASQHQPLMN*IIFFTC
Trigger: GCAGGTGAAGAAGATAATGCAATTCATTAATGGCTG...ATGTTGGGAGGCAGAATTCAGACACTCACAGATCAATCTTGCAAGTTTTCTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR GCA 90 bp CACCAAGCATACAACATTAAAGTGTCAATTCGTATCACTAACATTTTCAGGCACATGTACTCTGACAAATaGTCTTCAGACCTCTCACCA +
Preference number: 4 (lower is better)
Translates to: HQAYNIKVSIRITNIFRHMYSDK*SSDLSP
Trigger: TGGTGAGAGGTCTGAAGAGCATTTGTCAGAGTACAT...GTGCCTGAAAATGTTAGTGATACGAATTGACACTTTAATGTTGTATGCTTGGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR GCA 90 bp ATAATTCAACAGAAACTGTCATTTCCCCAGACATCATGGGAGTATTACATGCAAATGTACTCTGACAAATaGTCTTCAGACCTCTCACCA +
Preference number: 4 (lower is better)
Translates to: IIQQKLSFPQTSWEYYMQMYSDK*SSDLSP
Trigger: TGGTGAGAGGTCTGAAGAGCATTTGTCAGAGTACAT...TTGCATGTAATACTCCCATGATGTCTGGGGAAATGACAGTTTCTGTTGAATTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR GCA 90 bp ATAATTCAACAGAAACTGTCATTTCCCCAGACATCATGGGAGTATTACATGCAAGGCCATGATGATTTTTaGCATGAATCTAAGGACCCA +
Preference number: 4 (lower is better)
Translates to: IIQQKLSFPQTSWEYYMQGHDDF*HESKDP
Trigger: TGGGTCCTTAGATTCATGGCAAAAATCATCATGGCC...TTGCATGTAATACTCCCATGATGTCTGGGGAAATGACAGTTTCTGTTGAATTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR GCA 90 bp CTGCTTTGCATATCTTGTCATGATTCTCTTGGAGCTATGAATGCTCTGTCCAGTCTACTTCACATAATTTaGACTCTAGGCCTTTTATTC +
Preference number: 4 (lower is better)
Translates to: LLCISCHDSLGAMNALSSLLHII*TLGLLF
Trigger: GAATAAAAGGCCTAGAGTGCAAATTATGTGAAGTAG...ACTGGACAGAGCATTCATAGCTCCAAGAGAATCATGACAAGATATGCAAAGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CCA 90 bp TTAGCTGAATGGGCAGTTCACTGCAACTTCATAAACTGCAATGATATATGTGGGTCTACAAAACTAGACTaGTGGGTCTTGTCTTTCAAT +
Preference number: 4 (lower is better)
Translates to: LAEWAVHCNFINCNDICGSTKLD*WVLSFN
Trigger: ATTGAAAGACAAGACCCACCAGTCTAGTTTTGTAGA...CCCACATATATCATTGCAGTTTATGAAGTTGCAGTGAACTGCCCATTCAGCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR TCA 90 bp CACCAAGCATACAACATTAAAGTGTCAATTCGTATCACTAACATTTTCAGGCACGATTGTGTTGAGTCGTaGCTTTTCCTTGAATGTCTT +
Preference number: 4 (lower is better)
Translates to: HQAYNIKVSIRITNIFRHDCVES*LFLECL
Trigger: AAGACATTCAAGGAAAAGTCACGACTCAACACAATC...GTGCCTGAAAATGTTAGTGATACGAATTGACACTTTAATGTTGTATGCTTGGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR GCA 90 bp CACCAAGCATACAACATTAAAGTGTCAATTCGTATCACTAACATTTTCAGGCACAGCAGAGACTGTTTATaGATGTGTCTGAGAACAGTT +
Preference number: 4 (lower is better)
Translates to: HQAYNIKVSIRITNIFRHSRDCL*MCLRTV
Trigger: AACTGTTCTCAGACACATGCATAAACAGTCTCTGCT...GTGCCTGAAAATGTTAGTGATACGAATTGACACTTTAATGTTGTATGCTTGGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR GCA 90 bp ATAATTCAACAGAAACTGTCATTTCCCCAGACATCATGGGAGTATTACATGCAAAGCAGAGACTGTTTATaGATGTGTCTGAGAACAGTT +
Preference number: 4 (lower is better)
Translates to: IIQQKLSFPQTSWEYYMQSRDCL*MCLRTV
Trigger: AACTGTTCTCAGACACATGCATAAACAGTCTCTGCT...TTGCATGTAATACTCCCATGATGTCTGGGGAAATGACAGTTTCTGTTGAATTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CCA 90 bp CACCAAGCATACAACATTAAAGTGTCAATTCGTATCACTAACATTTTCAGGCACGTTGAAATATTGCACTaGCTCCTTTATATCTCGGTC +
Preference number: 4 (lower is better)
Translates to: HQAYNIKVSIRITNIFRHVEILH*LLYISV
Trigger: GACCGAGATATAAAGGAGCCAGTGCAATATTTCAAC...GTGCCTGAAAATGTTAGTGATACGAATTGACACTTTAATGTTGTATGCTTGGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CCA 90 bp CACCAAGCATACAACATTAAAGTGTCAATTCGTATCACTAACATTTTCAGGCACAAAATCAAAAGGTGCTaGGCAGTTTCTCTTTGGTGT +
Preference number: 4 (lower is better)
Translates to: HQAYNIKVSIRITNIFRHKIKRC*AVSLWC
Trigger: ACACCAAAGAGAAACTGCCCAGCACCTTTTGATTTT...GTGCCTGAAAATGTTAGTGATACGAATTGACACTTTAATGTTGTATGCTTGGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR GCA 90 bp CACCAAGCATACAACATTAAAGTGTCAATTCGTATCACTAACATTTTCAGGCACTTCCTTGAATGTCTTTaGATAAAGGATTTCTGCCTG +
Preference number: 4 (lower is better)
Translates to: HQAYNIKVSIRITNIFRHFLECL*IKDFCL
Trigger: CAGGCAGAAATCCTTTATGCAAAGACATTCAAGGAA...GTGCCTGAAAATGTTAGTGATACGAATTGACACTTTAATGTTGTATGCTTGGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR GCA 90 bp CACCAAGCATACAACATTAAAGTGTCAATTCGTATCACTAACATTTTCAGGCACTTGCCAATGAAAACTTaGAGCTTAGTAACTGCATCT +
Preference number: 4 (lower is better)
Translates to: HQAYNIKVSIRITNIFRHLPMKT*SLVTAS
Trigger: AGATGCAGTTACTAAGCTGCAAGTTTTCATTGGCAA...GTGCCTGAAAATGTTAGTGATACGAATTGACACTTTAATGTTGTATGCTTGGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CCA 90 bp CACCAAGCATACAACATTAAAGTGTCAATTCGTATCACTAACATTTTCAGGCACTTTTTAACAAAATACTaGTCCTCCGAGAGATCTGGT +
Preference number: 4 (lower is better)
Translates to: HQAYNIKVSIRITNIFRHFLTKY*SSERSG
Trigger: ACCAGATCTCTCGGAGGACCAGTATTTTGTTAAAAA...GTGCCTGAAAATGTTAGTGATACGAATTGACACTTTAATGTTGTATGCTTGGTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS TCA 90 bp CGCCTCCTCCTCCTCTTACCCCTCCTTCCCTCCGCCTCGAGCGTGTaGGGAGGAGCCGCGGGTCTGAGAAACGCCATAGCAGCGCTCCCA +
Preference number: 5 (lower is better)
Translates to: RLLLLLPLLPSASSV*GGAAGLRNAIAALP
Trigger: TGGGAGCGCTGCTATGGCGTTTCTCAGACCCGCGGCTCCTCCTCACACGCTCGAGGCGGAGGGAAGGAGGGGTAAGAGGAGGAGGAGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269209.7
CDS TCA 90 bp AGGACAAGGTGGGGCTGGGAGAGCGAGTCTGTTGCCGCGCTGGCTTaGCTGTGCGAGGAGGGATGGAGGGACTGGTGGACAAAGGCTTTG +
Preference number: 5 (lower is better)
Translates to: RTRWGWESESVAALA*LCEEGWRDWWTKAL
Trigger: CAAAGCCTTTGTCCACCAGTCCCTCCATCCCTCCTCGCACAGTCAAGCCAGCGCGGCAACAGACTCGCTCTCCCAGCCCCACCTTGTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS GCA 90 bp CTTGACTGTGCGAGGAGGGATGGAGGGACTGGTGGACAAAGGCTTTaGGCTTCGGGGTGGAACAGGTGGGGCGTTCAGGAGCCGGCATTC +
Preference number: 5 (lower is better)
Translates to: LDCARRDGGTGGQRL*ASGWNRWGVQEPAF
Trigger: GAATGCCGGCTCCTGAACGCCCCACCTGTTCCACCCCGAAGCGCAAAGCCTTTGTCCACCAGTCCCTCCATCCCTCCTCGCACAGTCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS CCA 90 bp AGGAGGGATGGAGGGACTGGTGGACAAAGGCTTTGCGCTTCGGGGTaGAACAGGTGGGGCGTTCAGGAGCCGGCATTCTTCTCTGACGGC +
Preference number: 5 (lower is better)
Translates to: RRDGGTGGQRLCASG*NRWGVQEPAFFSDG
Trigger: GCCGTCAGAGAAGAATGCCGGCTCCTGAACGCCCCACCTGTTCCACCCCGAAGCGCAAAGCCTTTGTCCACCAGTCCCTCCATCCCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS CCA 90 bp ATAGTAGGACAAGGTGGGGCTGGGAGAGCGAGTCTGTTGCCGCGCTaGCTTGACTGTGCGAGGAGGGATGGAGGGACTGGTGGACAAAGG +
Preference number: 5 (lower is better)
Translates to: IVGQGGAGRASLLPR*LDCARRDGGTGGQR
Trigger: CCTTTGTCCACCAGTCCCTCCATCCCTCCTCGCACAGTCAAGCCAGCGCGGCAACAGACTCGCTCTCCCAGCCCCACCTTGTCCTACTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS GCA 90 bp TTGGACACTTCCTCTATAGAGAGTCCTGATAGGTCAGCAGGTGGCTaGCATGGGGAACCGTCGCCACAGGATCTGGGGGCCAGCTGGAGA +
Preference number: 5 (lower is better)
Translates to: LDTSSIESPDRSAGG*HGEPSPQDLGASWR
Trigger: TCTCCAGCTGGCCCCCAGATCCTGTGGCGACGGTTCCCCATGGCAGCCACCTGCTGACCTATCAGGACTCTCTATAGAGGAAGTGTCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS CCA 90 bp GGAGGGACTGGTGGACAAAGGCTTTGCGCTTCGGGGTGGAACAGGTaGGGCGTTCAGGAGCCGGCATTCTTCTCTGACGGCTTCAGATTT +
Preference number: 5 (lower is better)
Translates to: GGTGGQRLCASGWNR*GVQEPAFFSDGFRF
Trigger: AAATCTGAAGCCGTCAGAGAAGAATGCCGGCTCCTGAACGCCCCACCTGTTCCACCCCGAAGCGCAAAGCCTTTGTCCACCAGTCCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS TCA 90 bp ACCGTCGCCACAGGATCTGGGGGCCAGCTGGAGATGGAGCGGAGATaGGAAAGGGTAGGAGGCAGAGAAGATGTCCTGCATGCCCTTTTT +
Preference number: 5 (lower is better)
Translates to: TVATGSGGQLEMERR*ERVGGREDVLHALF
Trigger: AAAAAGGGCATGCAGGACATCTTCTCTGCCTCCTACCCTTTCTCATCTCCGCTCCATCTCCAGCTGGCCCCCAGATCCTGTGGCGACGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS GCA 90 bp TGGGCACGTGGTTGTGGCCAGAGCACCGACCCTTCTTGGGGCTCTTaGATTCTTCATTCCAGTCGGTTTTCACATCACGGACAGCCCGTG +
Preference number: 5 (lower is better)
Translates to: WARGCGQSTDPSWGS*ILHSSRFSHHGQPV
Trigger: CACGGGCTGTCCGTGATGTGAAAACCGACTGGAATGAAGAATGCAAGAGCCCCAAGAAGGGTCGGTGCTCTGGCCACAACCACGTGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CAA 90 bp GTCCATCCTGCAAGTTATGCTGCCGCCTCACTGGCTGACCTTCCTATTCAAGAGTCTACGCACTCTCCGTaGTCCAGGCGCGCGATCTGG +
Preference number: 5 (lower is better)
Translates to: VHPASYAAASLADLPIQESTHSP*SRRAIW
Trigger: CCAGATCGCGCGCCTGGACAACGGAGAGTGCGTAGA...CTCTTGAATAGGAAGGTCAGCCAGTGAGGCGGCAGCATAACTTGCAGGATGGAC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CAA 90 bp GTCCATCCTGCAAGTTATGCTGCCGCCTCACTGGCTGACCTTCCTATTCAAGAGCTCCACTTCACATCCTaGAGGCTGCAGCCCAGCGAG +
Preference number: 5 (lower is better)
Translates to: VHPASYAAASLADLPIQELHFTS*RLQPSE
Trigger: CTCGCTGGGCTGCAGCCTCAAGGATGTGAAGTGGAG...CTCTTGAATAGGAAGGTCAGCCAGTGAGGCGGCAGCATAACTTGCAGGATGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS CCA 90 bp GAGATGTTTCGGAGGCGACCTTCTCTTCCACTAGTTTTGGAGCCCTaGGGGGTAAGGCAGGGCATGACGTACTCTGCTTTGTCACACCAG +
Preference number: 5 (lower is better)
Translates to: EMFRRRPSLPLVLEP*GVRQGMTYSALSHQ
Trigger: CTGGTGTGACAAAGCAGAGTACGTCATGCCCTGCCTTACCCCCCAGGGCTCCAAAACTAGTGGAAGAGAAGGTCGCCTCCGAAACATCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS TCA 90 bp TCTTGGTCTGGATGTTCACAAACTTATAGCGGTGCCCCTCACGGATaGAGTGGAGGTCGTATGGGTTTCTCGGTGGAGGGCTTGGCACAG +
Preference number: 5 (lower is better)
Translates to: SWSGCSQTYSGAPHG*SGGRMGFSVEGLAQ
Trigger: CTGTGCCAAGCCCTCCACCGAGAAACCCATACGACCTCCACTTCATCCGTGAGGGGCACCGCTATAAGTTTGTGAACATCCAGACCAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS GCA 90 bp CCCTTCACCAGGTGTTCTGGGAGGCTGAACTTGGGGACAGTCAAGTaGAAAGGAAAGTGCATGGGGAGGATCTTGTTGTTCCGCAGCACA +
Preference number: 5 (lower is better)
Translates to: PFTRCSGRLNLGTVK*KGKCMGRILLFRST
Trigger: TGTGCTGCGGAACAACAAGATCCTCCCCATGCACTTTCCTTTGCACTTGACTGTCCCCAAGTTCAGCCTCCCAGAACACCTGGTGAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CAA 90 bp CCTGCAAGTTATGCTGCCGCCTCACTGGCTGACCTTCCTATTCAAGAGGGCACTGTTTTCTCCACAATGTaGCGGATGGTGTGTTCGCCC +
Preference number: 5 (lower is better)
Translates to: PASYAAASLADLPIQEGTVFSTM*RMVCSP
Trigger: GGGCGAACACACCATCCGCAACATTGTGGAGAAAAC...AGTGCCCTCTTGAATAGGAAGGTCAGCCAGTGAGGCGGCAGCATAACTTGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CAA 90 bp GGAAGGGCTTCTCGAAAGGGAAGGGCTTTCTCCTTATTATCCCTGCTTTGCATAGAATTGGGCACGTGGTaGTGGCCAGAGCACCGACCC +
Preference number: 5 (lower is better)
Translates to: GRASRKGRAFSLLSLLCIELGTW*WPEHRP
Trigger: GGGTCGGTGCTCTGGCCACAACCACGTGCCCAATTC...TATGCAAAGCAGGGATAATAAGGAGAAAGCCCTTCCCTTTCGAGAAGCCCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CAA 90 bp GTGCAAAAACATGAAATTGTGTCCCAGCCCACCCCTTCTAGCACACGCATTGATGGGAGAGCGAGTCTGTaGCCGCGCTGGCTTGACTGT +
Preference number: 5 (lower is better)
Translates to: VQKHEIVSQPTPSSTRIDGRASL*PRWLDC
Trigger: ACAGTCAAGCCAGCGCGGCAACAGACTCGCTCTCCC...ATCAATGCGTGTGCTAGAAGGGGTGGGCTGGGACACAATTTCATGTTTTTGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS TCA 90 bp GAATACTCATCGATGTCGAACTGTTCTTGGCAGATACCTAGCCAGTaGTGGACCAGGGTTTCGGGCCAGCTCTCTCCCTTCACCAGGTGT +
Preference number: 5 (lower is better)
Translates to: EYSSMSNCSWQIPSQ*WTRVSGQLSPFTRC
Trigger: ACACCTGGTGAAGGGAGAGAGCTGGCCCGAAACCCTGGTCCATCACTGGCTAGGTATCTGCCAAGAACAGTTCGACATCGATGAGTATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS GCA 90 bp TGTTCTGGGAGGCTGAACTTGGGGACAGTCAAGTGCAAAGGAAAGTaGATGGGGAGGATCTTGTTGTTCCGCAGCACACAGCAAACCACC +
Preference number: 5 (lower is better)
Translates to: CSGRLNLGTVKCKGK*MGRILLFRSTQQTT
Trigger: GGTGGTTTGCTGTGTGCTGCGGAACAACAAGATCCTCCCCATGCACTTTCCTTTGCACTTGACTGTCCCCAAGTTCAGCCTCCCAGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CAA 90 bp GTCCATCCTGCAAGTTATGCTGCCGCCTCACTGGCTGACCTTCCTATTCAAGAGATGAGGCACGGCATTTaGCCTTTTCCCAGCTTGCTG +
Preference number: 5 (lower is better)
Translates to: VHPASYAAASLADLPIQEMRHGI*PFPSLL
Trigger: CAGCAAGCTGGGAAAAGGCAAAATGCCGTGCCTCAT...CTCTTGAATAGGAAGGTCAGCCAGTGAGGCGGCAGCATAACTTGCAGGATGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CAA 90 bp CCTGCAAGTTATGCTGCCGCCTCACTGGCTGACCTTCCTATTCAAGAGGGCACTGTGCTAAATCTGCCCTaGCACTGGAATGGAAGGCTA +
Preference number: 5 (lower is better)
Translates to: PASYAAASLADLPIQEGTVLNLP*HWNGRL
Trigger: TAGCCTTCCATTCCAGTGCAAGGGCAGATTTAGCAC...AGTGCCCTCTTGAATAGGAAGGTCAGCCAGTGAGGCGGCAGCATAACTTGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CAA 90 bp GTCCATCCTGCAAGTTATGCTGCCGCCTCACTGGCTGACCTTCCTATTCAAGAGCCCTTCTTGGGGCTCTaGCATTCTTCATTCCAGTCG +
Preference number: 5 (lower is better)
Translates to: VHPASYAAASLADLPIQEPFLGL*HSSFQS
Trigger: CGACTGGAATGAAGAATGCAAGAGCCCCAAGAAGGG...CTCTTGAATAGGAAGGTCAGCCAGTGAGGCGGCAGCATAACTTGCAGGATGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CAA 90 bp CCTGCAAGTTATGCTGCCGCCTCACTGGCTGACCTTCCTATTCAAGAGGGCACTGGAGAAGTCGCACATTaGGATCGGACAGAACCTCTA +
Preference number: 5 (lower is better)
Translates to: PASYAAASLADLPIQEGTGEVAH*DRTEPL
Trigger: TAGAGGTTCTGTCCGATCCAAATGTGCGACTTCTCC...AGTGCCCTCTTGAATAGGAAGGTCAGCCAGTGAGGCGGCAGCATAACTTGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CAA 90 bp CCTGCAAGTTATGCTGCCGCCTCACTGGCTGACCTTCCTATTCAAGAGGGCACTATGACGTACTCTGCTTaGTCACACCAGCTGCAAGAG +
Preference number: 5 (lower is better)
Translates to: PASYAAASLADLPIQEGTMTYSA*SHQLQE
Trigger: CTCTTGCAGCTGGTGTGACAAAGCAGAGTACGTCAT...AGTGCCCTCTTGAATAGGAAGGTCAGCCAGTGAGGCGGCAGCATAACTTGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS GCA 90 bp ACGTACTCTGCTTTGTCACACCAGCTGCAAGAGATTTCACATCTGTaGTCTCCAGAGAGTAGCTGGCTGACTTGGGACAACCAGAGACGC +
Preference number: 5 (lower is better)
Translates to: TYSALSHQLQEISHL*SPESSWLTWDNQRR
Trigger: GCGTCTCTGGTTGTCCCAAGTCAGCCAGCTACTCTCTGGAGAGCACAGATGTGAAATCTCTTGCAGCTGGTGTGACAAAGCAGAGTACGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CAA 90 bp TCCCTGCTTTGCATATCTTGTCATGATTCTCTTGGAGCTATGAATGCTCTGTCCTGTTGCCGCGCTGGCTaGACTGTGCGAGGAGGGATG +
Preference number: 5 (lower is better)
Translates to: SLLCISCHDSLGAMNALSCCRAG*TVRGGM
Trigger: CATCCCTCCTCGCACAGTCAAGCCAGCGCGGCAACA...GGACAGAGCATTCATAGCTCCAAGAGAATCATGACAAGATATGCAAAGCAGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CAA 90 bp CCTGCAAGTTATGCTGCCGCCTCACTGGCTGACCTTCCTATTCAAGAGGGCACTAACTATAACTCCTGCTaGGATCCAGCAGGAAGTCAC +
Preference number: 5 (lower is better)
Translates to: PASYAAASLADLPIQEGTNYNSC*DPAGSH
Trigger: GTGACTTCCTGCTGGATCCAAGCAGGAGTTATAGTT...AGTGCCCTCTTGAATAGGAAGGTCAGCCAGTGAGGCGGCAGCATAACTTGCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CAA 90 bp CCTGCAAGTTATGCTGCCGCCTCACTGGCTGACCTTCCTATTCAAGAGGGCACTACTTCAGTGTCTTCATaGCATTCACCTGAAGCAACC +
Preference number: 5 (lower is better)
Translates to: PASYAAASLADLPIQEGTTSVSS*HSPEAT
Trigger: GGTTGCTTCAGGTGAATGCAATGAAGACACTGAAGT...AGTGCCCTCTTGAATAGGAAGGTCAGCCAGTGAGGCGGCAGCATAACTTGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CAA 90 bp GGAAGGGCTTCTCGAAAGGGAAGGGCTTTCTCCTTATTATCCCTGCTTTGCATATGCATGGGGAGGATCTaGTTGTTCCGCAGCACACAG +
Preference number: 5 (lower is better)
Translates to: GRASRKGRAFSLLSLLCICMGRI*LFRSTQ
Trigger: CTGTGTGCTGCGGAACAACAAGATCCTCCCCATGCA...TATGCAAAGCAGGGATAATAAGGAGAAAGCCCTTCCCTTTCGAGAAGCCCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CAA 90 bp GTGCAAAAACATGAAATTGTGTCCCAGCCCACCCCTTCTAGCACACGCATTGATCTGGCCGGGGGTTATTaGGCTATATTTTGGGCCTCC +
Preference number: 5 (lower is better)
Translates to: VQKHEIVSQPTPSSTRIDLAGGY*AIFWAS
Trigger: GGAGGCCCAAAATATAGCCAAATAACCCCCGGCCAG...ATCAATGCGTGTGCTAGAAGGGGTGGGCTGGGACACAATTTCATGTTTTTGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CAA 90 bp GATAGACACTTCCTCTCTTTTGATTACAGGGGACCTGCCAGAGGAGATAAGATGTTCTCGGTGGAGGGCTaGGCACAGTCACATTCACAG +
Preference number: 5 (lower is better)
Translates to: DRHFLSFDYRGPARGDKMFSVEG*AQSHSQ
Trigger: CTGTGAATGTGACTGTGCCAAGCCCTCCACCGAGAA...CATCTTATCTCCTCTGGCAGGTCCCCTGTAATCAAAAGAGAGGAAGTGTCTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CAA 90 bp TCCCTGCTTTGCATATCTTGTCATGATTCTCTTGGAGCTATGAATGCTCTGTCCTCTGGTGACCCAGACTaGGGGTCTTCCTCAGCACCA +
Preference number: 5 (lower is better)
Translates to: SLLCISCHDSLGAMNALSSGDPD*GSSSAP
Trigger: TGGTGCTGAGGAAGACCCCAAGTCTGGGTCACCAGA...GGACAGAGCATTCATAGCTCCAAGAGAATCATGACAAGATATGCAAAGCAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CAA 90 bp GTCCATCCTGCAAGTTATGCTGCCGCCTCACTGGCTGACCTTCCTATTCAAGAGATGAACCGTAGTGACTaGGACACTTCCTCTATAGAG +
Preference number: 5 (lower is better)
Translates to: VHPASYAAASLADLPIQEMNRSD*DTSSIE
Trigger: CTCTATAGAGGAAGTGTCCAAGTCACTACGGTTCAT...CTCTTGAATAGGAAGGTCAGCCAGTGAGGCGGCAGCATAACTTGCAGGATGGAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CAA 90 bp CTCACCATCAGACACCAGGGGAAGGAGACCCTTAAACCGGAGAATTATAATTCACTGGCCGGGGGTTATTaGGCTATATTTTGGGCCTCC +
Preference number: 5 (lower is better)
Translates to: LTIRHQGKETLKPENYNSLAGGY*AIFWAS
Trigger: GGAGGCCCAAAATATAGCCAAATAACCCCCGGCCAG...TGAATTATAATTCTCCGGTTTAAGGGTCTCCTTCCCCTGGTGTCTGATGGTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CAA 90 bp GTGCAAAAACATGAAATTGTGTCCCAGCCCACCCCTTCTAGCACACGCATTGATGCAGCTGCTGAGTGTTaGTTGAGTGACGTACAAGGC +
Preference number: 5 (lower is better)
Translates to: VQKHEIVSQPTPSSTRIDAAAEC*LSDVQG
Trigger: GCCTTGTACGTCACTCAACAAACACTCAGCAGCTGC...ATCAATGCGTGTGCTAGAAGGGGTGGGCTGGGACACAATTTCATGTTTTTGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS GCA 90 bp TGCACTGGCTCCTTTATATCTCGGTCTTGTTCCAGCAGCTTGAATTaGCCTCAAAATCACCCAGAAGACCGTGAAAACAGATTGCTGGGC +
Preference number: 5 (lower is better)
Translates to: CTGSFISRSCSSSLN*PQNHPEDRENRLLG
Trigger: GCCCAGCAATCTGTTTTCACGGTCTTCTGGGTGATTTTGAGGGCAATTCAAGCTGCTGGAACAAGACCGAGATATAAAGGAGCCAGTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578619.1
CDS-3UTR CAA 90 bp AAGAGAAAACTTGCAAGATTGATCTGTGAGTGTCTGAATTCTGCCTCCCAACATCTCCACTTCACATCCTaGAGGCTGCAGCCCAGCGAG +
Preference number: 5 (lower is better)
Translates to: KRKLARLICECLNSASQHLHFTS*RLQPSE
Trigger: CTCGCTGGGCTGCAGCCTCAAGGATGTGAAGTGGAG...ATGTTGGGAGGCAGAATTCAGACACTCACAGATCAATCTTGCAAGTTTTCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CAA 90 bp CCTGCAAGTTATGCTGCCGCCTCACTGGCTGACCTTCCTATTCAAGAGGGCACTAGCTTCCCAATCTTTTaGAAGATTGTGTTGAGTCGT +
Preference number: 5 (lower is better)
Translates to: PASYAAASLADLPIQEGTSFPIF*KIVLSR
Trigger: ACGACTCAACACAATCTTCAAAAAGATTGGGAAGCT...AGTGCCCTCTTGAATAGGAAGGTCAGCCAGTGAGGCGGCAGCATAACTTGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CAA 90 bp CTCACCATCAGACACCAGGGGAAGGAGACCCTTAAACCGGAGAATTATAATTCAATGAGGCACGGCATTTaGCCTTTTCCCAGCTTGCTG +
Preference number: 5 (lower is better)
Translates to: LTIRHQGKETLKPENYNSMRHGI*PFPSLL
Trigger: CAGCAAGCTGGGAAAAGGCAAAATGCCGTGCCTCAT...TGAATTATAATTCTCCGGTTTAAGGGTCTCCTTCCCCTGGTGTCTGATGGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CAA 90 bp TCCCTGCTTTGCATATCTTGTCATGATTCTCTTGGAGCTATGAATGCTCTGTCCTGCATGGGGAGGATCTaGTTGTTCCGCAGCACACAG +
Preference number: 5 (lower is better)
Translates to: SLLCISCHDSLGAMNALSCMGRI*LFRSTQ
Trigger: CTGTGTGCTGCGGAACAACAAGATCCTCCCCATGCA...GGACAGAGCATTCATAGCTCCAAGAGAATCATGACAAGATATGCAAAGCAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CAA 90 bp GATAGACACTTCCTCTCTTTTGATTACAGGGGACCTGCCAGAGGAGATAAGATGCCCTTCTTGGGGCTCTaGCATTCTTCATTCCAGTCG +
Preference number: 5 (lower is better)
Translates to: DRHFLSFDYRGPARGDKMPFLGL*HSSFQS
Trigger: CGACTGGAATGAAGAATGCAAGAGCCCCAAGAAGGG...CATCTTATCTCCTCTGGCAGGTCCCCTGTAATCAAAAGAGAGGAAGTGTCTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CAA 90 bp GGAAGGGCTTCTCGAAAGGGAAGGGCTTTCTCCTTATTATCCCTGCTTTGCATACTGTTGCCATGGAGATaGTTGCCATACACACAGACC +
Preference number: 5 (lower is better)
Translates to: GRASRKGRAFSLLSLLCILLPWR*LPYTQT
Trigger: GGTCTGTGTGTATGGCAACAATCTCCATGGCAACAG...TATGCAAAGCAGGGATAATAAGGAGAAAGCCCTTCCCTTTCGAGAAGCCCTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CAA 90 bp CTGCTTTGCATATCTTGTCATGATTCTCTTGGAGCTATGAATGCTCTGTCCAGTTGGTGGACAAAGGCTTaGCGCTTCGGGGTGGAACAG +
Preference number: 5 (lower is better)
Translates to: LLCISCHDSLGAMNALSSWWTKA*RFGVEQ
Trigger: CTGTTCCACCCCGAAGCGCAAAGCCTTTGTCCACCA...ACTGGACAGAGCATTCATAGCTCCAAGAGAATCATGACAAGATATGCAAAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CAA 90 bp CTCACCATCAGACACCAGGGGAAGGAGACCCTTAAACCGGAGAATTATAATTCACTGGGCAGTTTCTCTTaGGTGTGCCTGGCGTCTTTT +
Preference number: 5 (lower is better)
Translates to: LTIRHQGKETLKPENYNSLGSFS*VCLASF
Trigger: AAAAGACGCCAGGCACACCAAAGAGAAACTGCCCAG...TGAATTATAATTCTCCGGTTTAAGGGTCTCCTTCCCCTGGTGTCTGATGGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CAA 90 bp CACCAAGCATACAACATTAAAGTGTCAATTCGTATCACTAACATTTTCAGGCACTCTACGCACTCTCCGTaGTCCAGGCGCGCGATCTGG +
Preference number: 5 (lower is better)
Translates to: HQAYNIKVSIRITNIFRHSTHSP*SRRAIW
Trigger: CCAGATCGCGCGCCTGGACAACGGAGAGTGCGTAGA...GTGCCTGAAAATGTTAGTGATACGAATTGACACTTTAATGTTGTATGCTTGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CAA 90 bp GTCCATCCTGCAAGTTATGCTGCCGCCTCACTGGCTGACCTTCCTATTCAAGAGCACACTGTTGAAATATaGCACTGGCTCCTTTATATC +
Preference number: 5 (lower is better)
Translates to: VHPASYAAASLADLPIQEHTVEI*HWLLYI
Trigger: GATATAAAGGAGCCAGTGCAATATTTCAACAGTGTG...CTCTTGAATAGGAAGGTCAGCCAGTGAGGCGGCAGCATAACTTGCAGGATGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CAA 90 bp TTAGCTGAATGGGCAGTTCACTGCAACTTCATAAACTGCAATGATATATGTGGGGGTGTGTTCGCCCTCTaGCATCTGAAGTTCCAGGGG +
Preference number: 5 (lower is better)
Translates to: LAEWAVHCNFINCNDICGGVFAL*HLKFQG
Trigger: CCCCTGGAACTTCAGATGCAAGAGGGCGAACACACC...CCCACATATATCATTGCAGTTTATGAAGTTGCAGTGAACTGCCCATTCAGCTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CAA 90 bp CTGCTTTGCATATCTTGTCATGATTCTCTTGGAGCTATGAATGCTCTGTCCAGTTTCTCGGTGGAGGGCTaGGCACAGTCACATTCACAG +
Preference number: 5 (lower is better)
Translates to: LLCISCHDSLGAMNALSSFSVEG*AQSHSQ
Trigger: CTGTGAATGTGACTGTGCCAAGCCCTCCACCGAGAA...ACTGGACAGAGCATTCATAGCTCCAAGAGAATCATGACAAGATATGCAAAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CAA 90 bp CTCACCATCAGACACCAGGGGAAGGAGACCCTTAAACCGGAGAATTATAATTCACAAACCACCACCGTCTaGGTCTGGATGTTCACAAAC +
Preference number: 5 (lower is better)
Translates to: LTIRHQGKETLKPENYNSQTTTV*VWMFTN
Trigger: GTTTGTGAACATCCAGACCAAGACGGTGGTGGTTTG...TGAATTATAATTCTCCGGTTTAAGGGTCTCCTTCCCCTGGTGTCTGATGGTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CAA 90 bp CTGCTTTGCATATCTTGTCATGATTCTCTTGGAGCTATGAATGCTCTGTCCAGTGAGCACCGACCCTTCTaGGGGCTCTTGCATTCTTCA +
Preference number: 5 (lower is better)
Translates to: LLCISCHDSLGAMNALSSEHRPF*GLLHSS
Trigger: TGAAGAATGCAAGAGCCCCAAGAAGGGTCGGTGCTC...ACTGGACAGAGCATTCATAGCTCCAAGAGAATCATGACAAGATATGCAAAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CAA 90 bp ATAATTCAACAGAAACTGTCATTTCCCCAGACATCATGGGAGTATTACATGCAAGAATTGGGCACGTGGTaGTGGCCAGAGCACCGACCC +
Preference number: 5 (lower is better)
Translates to: IIQQKLSFPQTSWEYYMQELGTW*WPEHRP
Trigger: GGGTCGGTGCTCTGGCCACAACCACGTGCCCAATTC...TTGCATGTAATACTCCCATGATGTCTGGGGAAATGACAGTTTCTGTTGAATTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CAA 90 bp CTCACCATCAGACACCAGGGGAAGGAGACCCTTAAACCGGAGAATTATAATTCATTGCCATGGAGATTGTaGCCATACACACAGACCGAG +
Preference number: 5 (lower is better)
Translates to: LTIRHQGKETLKPENYNSLPWRL*PYTQTE
Trigger: CTCGGTCTGTGTGTATGGCAACAATCTCCATGGCAA...TGAATTATAATTCTCCGGTTTAAGGGTCTCCTTCCCCTGGTGTCTGATGGTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CAA 90 bp CTCACCATCAGACACCAGGGGAAGGAGACCCTTAAACCGGAGAATTATAATTCAAGGTTCACCTCACTGTaGCCATGGAGATTGTTGCCA +
Preference number: 5 (lower is better)
Translates to: LTIRHQGKETLKPENYNSRFTSL*PWRLLP
Trigger: TGGCAACAATCTCCATGGCAACAGTGAGGTGAACCT...TGAATTATAATTCTCCGGTTTAAGGGTCTCCTTCCCCTGGTGTCTGATGGTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CAA 90 bp AAGAGAAAACTTGCAAGATTGATCTGTGAGTGTCTGAATTCTGCCTCCCAACATTGGTGGACAAAGGCTTaGCGCTTCGGGGTGGAACAG +
Preference number: 5 (lower is better)
Translates to: KRKLARLICECLNSASQHWWTKA*RFGVEQ
Trigger: CTGTTCCACCCCGAAGCGCAAAGCCTTTGTCCACCA...ATGTTGGGAGGCAGAATTCAGACACTCACAGATCAATCTTGCAAGTTTTCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CAA 90 bp ATAATTCAACAGAAACTGTCATTTCCCCAGACATCATGGGAGTATTACATGCAATGTTGCCGCGCTGGCTaGACTGTGCGAGGAGGGATG +
Preference number: 5 (lower is better)
Translates to: IIQQKLSFPQTSWEYYMQCCRAG*TVRGGM
Trigger: CATCCCTCCTCGCACAGTCAAGCCAGCGCGGCAACA...TTGCATGTAATACTCCCATGATGTCTGGGGAAATGACAGTTTCTGTTGAATTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CAA 90 bp ATAATTCAACAGAAACTGTCATTTCCCCAGACATCATGGGAGTATTACATGCAAGGGAGAGCGAGTCTGTaGCCGCGCTGGCTTGACTGT +
Preference number: 5 (lower is better)
Translates to: IIQQKLSFPQTSWEYYMQGRASL*PRWLDC
Trigger: ACAGTCAAGCCAGCGCGGCAACAGACTCGCTCTCCC...TTGCATGTAATACTCCCATGATGTCTGGGGAAATGACAGTTTCTGTTGAATTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CAA 90 bp GTGCAAAAACATGAAATTGTGTCCCAGCCCACCCCTTCTAGCACACGCATTGATAACTATAACTCCTGCTaGGATCCAGCAGGAAGTCAC +
Preference number: 5 (lower is better)
Translates to: VQKHEIVSQPTPSSTRIDNYNSC*DPAGSH
Trigger: GTGACTTCCTGCTGGATCCAAGCAGGAGTTATAGTT...ATCAATGCGTGTGCTAGAAGGGGTGGGCTGGGACACAATTTCATGTTTTTGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CAA 90 bp TCCCTGCTTTGCATATCTTGTCATGATTCTCTTGGAGCTATGAATGCTCTGTCCCTGGGCAGTTTCTCTTaGGTGTGCCTGGCGTCTTTT +
Preference number: 5 (lower is better)
Translates to: SLLCISCHDSLGAMNALSLGSFS*VCLASF
Trigger: AAAAGACGCCAGGCACACCAAAGAGAAACTGCCCAG...GGACAGAGCATTCATAGCTCCAAGAGAATCATGACAAGATATGCAAAGCAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CAA 90 bp AAGAGAAAACTTGCAAGATTGATCTGTGAGTGTCTGAATTCTGCCTCCCAACATTCTGGTGACCCAGACTaGGGGTCTTCCTCAGCACCA +
Preference number: 5 (lower is better)
Translates to: KRKLARLICECLNSASQHSGDPD*GSSSAP
Trigger: TGGTGCTGAGGAAGACCCCAAGTCTGGGTCACCAGA...ATGTTGGGAGGCAGAATTCAGACACTCACAGATCAATCTTGCAAGTTTTCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CAA 90 bp GTCCATCCTGCAAGTTATGCTGCCGCCTCACTGGCTGACCTTCCTATTCAAGAGTTATTTGGCTATATTTaGGGCCTCCAGCCATTAATG +
Preference number: 5 (lower is better)
Translates to: VHPASYAAASLADLPIQELFGYI*GLQPLM
Trigger: CATTAATGGCTGGAGGCCCAAAATATAGCCAAATAA...CTCTTGAATAGGAAGGTCAGCCAGTGAGGCGGCAGCATAACTTGCAGGATGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CAA 90 bp GGAAGGGCTTCTCGAAAGGGAAGGGCTTTCTCCTTATTATCCCTGCTTTGCATAGAAGCAACCTTCACGTaGAATGTGATATCCTCCATG +
Preference number: 5 (lower is better)
Translates to: GRASRKGRAFSLLSLLCIEATFT*NVISSM
Trigger: CATGGAGGATATCACATTCAACGTGAAGGTTGCTTC...TATGCAAAGCAGGGATAATAAGGAGAAAGCCCTTCCCTTTCGAGAAGCCCTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CAA 90 bp GTGCAAAAACATGAAATTGTGTCCCAGCCCACCCCTTCTAGCACACGCATTGATACTTCAGTGTCTTCATaGCATTCACCTGAAGCAACC +
Preference number: 5 (lower is better)
Translates to: VQKHEIVSQPTPSSTRIDTSVSS*HSPEAT
Trigger: GGTTGCTTCAGGTGAATGCAATGAAGACACTGAAGT...ATCAATGCGTGTGCTAGAAGGGGTGGGCTGGGACACAATTTCATGTTTTTGCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CAA 90 bp CTGCTTTGCATATCTTGTCATGATTCTCTTGGAGCTATGAATGCTCTGTCCAGTTCTGGGAGGCTGAACTaGGGGACAGTCAAGTGCAAA +
Preference number: 5 (lower is better)
Translates to: LLCISCHDSLGAMNALSSSGRLN*GTVKCK
Trigger: TTTGCACTTGACTGTCCCCAAGTTCAGCCTCCCAGA...ACTGGACAGAGCATTCATAGCTCCAAGAGAATCATGACAAGATATGCAAAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CAA 90 bp CTCACCATCAGACACCAGGGGAAGGAGACCCTTAAACCGGAGAATTATAATTCATGCAAAAACATGAAATaGTGTCCCAGCCCACCCCTT +
Preference number: 5 (lower is better)
Translates to: LTIRHQGKETLKPENYNSCKNMK*CPSPPL
Trigger: AAGGGGTGGGCTGGGACACAATTTCATGTTTTTGCA...TGAATTATAATTCTCCGGTTTAAGGGTCTCCTTCCCCTGGTGTCTGATGGTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CAA 90 bp CTGCTTTGCATATCTTGTCATGATTCTCTTGGAGCTATGAATGCTCTGTCCAGTGCAGCTGCTGAGTGTTaGTTGAGTGACGTACAAGGC +
Preference number: 5 (lower is better)
Translates to: LLCISCHDSLGAMNALSSAAAEC*LSDVQG
Trigger: GCCTTGTACGTCACTCAACAAACACTCAGCAGCTGC...ACTGGACAGAGCATTCATAGCTCCAAGAGAATCATGACAAGATATGCAAAGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CAA 90 bp CTCACCATCAGACACCAGGGGAAGGAGACCCTTAAACCGGAGAATTATAATTCACGGATTCAGCTAGGTTaGCCAATGAAAACTTGCAGC +
Preference number: 5 (lower is better)
Translates to: LTIRHQGKETLKPENYNSRIQLG*PMKTCS
Trigger: GCTGCAAGTTTTCATTGGCAAACCTAGCTGAATCCG...TGAATTATAATTCTCCGGTTTAAGGGTCTCCTTCCCCTGGTGTCTGATGGTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CAA 90 bp GTCCATCCTGCAAGTTATGCTGCCGCCTCACTGGCTGACCTTCCTATTCAAGAGGCTTGGCTTGGTTTATaGCTGATTTTCTTTTCTGAT +
Preference number: 5 (lower is better)
Translates to: VHPASYAAASLADLPIQEAWLGL*LIFFSD
Trigger: ATCAGAAAAGAAAATCAGCAATAAACCAAGCCAAGC...CTCTTGAATAGGAAGGTCAGCCAGTGAGGCGGCAGCATAACTTGCAGGATGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CAA 90 bp GTCCATCCTGCAAGTTATGCTGCCGCCTCACTGGCTGACCTTCCTATTCAAGAGAATCACGTTTATTCCTaGTTTCTGGCTATCACAATG +
Preference number: 5 (lower is better)
Translates to: VHPASYAAASLADLPIQENHVYS*FLAITM
Trigger: CATTGTGATAGCCAGAAACAAGGAATAAACGTGATT...CTCTTGAATAGGAAGGTCAGCCAGTGAGGCGGCAGCATAACTTGCAGGATGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CAA 90 bp CTGCTTTGCATATCTTGTCATGATTCTCTTGGAGCTATGAATGCTCTGTCCAGTGTGCTAAATCTGCCCTaGCACTGGAATGGAAGGCTA +
Preference number: 5 (lower is better)
Translates to: LLCISCHDSLGAMNALSSVLNLP*HWNGRL
Trigger: TAGCCTTCCATTCCAGTGCAAGGGCAGATTTAGCAC...ACTGGACAGAGCATTCATAGCTCCAAGAGAATCATGACAAGATATGCAAAGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CAA 90 bp CACCAAGCATACAACATTAAAGTGTCAATTCGTATCACTAACATTTTCAGGCACGGTGTGTTCGCCCTCTaGCATCTGAAGTTCCAGGGG +
Preference number: 5 (lower is better)
Translates to: HQAYNIKVSIRITNIFRHGVFAL*HLKFQG
Trigger: CCCCTGGAACTTCAGATGCAAGAGGGCGAACACACC...GTGCCTGAAAATGTTAGTGATACGAATTGACACTTTAATGTTGTATGCTTGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CAA 90 bp AAGAGAAAACTTGCAAGATTGATCTGTGAGTGTCTGAATTCTGCCTCCCAACATATGGGGAGGATCTTGTaGTTCCGCAGCACACAGCAA +
Preference number: 5 (lower is better)
Translates to: KRKLARLICECLNSASQHMGRIL*FRSTQQ
Trigger: TTGCTGTGTGCTGCGGAACAACAAGATCCTCCCCAT...ATGTTGGGAGGCAGAATTCAGACACTCACAGATCAATCTTGCAAGTTTTCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CAA 90 bp GATAGACACTTCCTCTCTTTTGATTACAGGGGACCTGCCAGAGGAGATAAGATGTGTGCCTGGCGTCTTTaGTCTAGGGTAACTATAACT +
Preference number: 5 (lower is better)
Translates to: DRHFLSFDYRGPARGDKMCAWRL*SRVTIT
Trigger: AGTTATAGTTACCCTAGACAAAAGACGCCAGGCACA...CATCTTATCTCCTCTGGCAGGTCCCCTGTAATCAAAAGAGAGGAAGTGTCTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CAA 90 bp CTGCTTTGCATATCTTGTCATGATTCTCTTGGAGCTATGAATGCTCTGTCCAGTGCTGCTGAGTGTTTGTaGAGTGACGTACAAGGCACA +
Preference number: 5 (lower is better)
Translates to: LLCISCHDSLGAMNALSSAAECL*SDVQGT
Trigger: TGTGCCTTGTACGTCACTCAACAAACACTCAGCAGC...ACTGGACAGAGCATTCATAGCTCCAAGAGAATCATGACAAGATATGCAAAGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CAA 90 bp GTGCAAAAACATGAAATTGTGTCCCAGCCCACCCCTTCTAGCACACGCATTGATACATATCCGGGTGTATaGTGTATGCACCTATACATG +
Preference number: 5 (lower is better)
Translates to: VQKHEIVSQPTPSSTRIDTYPGV*CMHLYM
Trigger: CATGTATAGGTGCATACACAATACACCCGGATATGT...ATCAATGCGTGTGCTAGAAGGGGTGGGCTGGGACACAATTTCATGTTTTTGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS TCA 90 bp AATATTGCACTGGCTCCTTTATATCTCGGTCTTGTTCCAGCAGCTTaGATTGCCCTCAAAATCACCCAGAAGACCGTGAAAACAGATTGC +
Preference number: 5 (lower is better)
Translates to: NIALAPLYLGLVPAA*IALKITQKTVKTDC
Trigger: GCAATCTGTTTTCACGGTCTTCTGGGTGATTTTGAGGGCAATTCAAGCTGCTGGAACAAGACCGAGATATAAAGGAGCCAGTGCAATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578619.1
CDS-3UTR CAA 90 bp GGAAGGGCTTCTCGAAAGGGAAGGGCTTTCTCCTTATTATCCCTGCTTTGCATAAGCTTCCCAATCTTTTaGAAGATTGTGTTGAGTCGT +
Preference number: 5 (lower is better)
Translates to: GRASRKGRAFSLLSLLCISFPIF*KIVLSR
Trigger: ACGACTCAACACAATCTTCAAAAAGATTGGGAAGCT...TATGCAAAGCAGGGATAATAAGGAGAAAGCCCTTCCCTTTCGAGAAGCCCTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CAA 90 bp AAGAGAAAACTTGCAAGATTGATCTGTGAGTGTCTGAATTCTGCCTCCCAACATCTGTTGCCATGGAGATaGTTGCCATACACACAGACC +
Preference number: 5 (lower is better)
Translates to: KRKLARLICECLNSASQHLLPWR*LPYTQT
Trigger: GGTCTGTGTGTATGGCAACAATCTCCATGGCAACAG...ATGTTGGGAGGCAGAATTCAGACACTCACAGATCAATCTTGCAAGTTTTCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CAA 90 bp TCCCTGCTTTGCATATCTTGTCATGATTCTCTTGGAGCTATGAATGCTCTGTCCATGAACCGTAGTGACTaGGACACTTCCTCTATAGAG +
Preference number: 5 (lower is better)
Translates to: SLLCISCHDSLGAMNALSMNRSD*DTSSIE
Trigger: CTCTATAGAGGAAGTGTCCAAGTCACTACGGTTCAT...GGACAGAGCATTCATAGCTCCAAGAGAATCATGACAAGATATGCAAAGCAGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CAA 90 bp GTGCAAAAACATGAAATTGTGTCCCAGCCCACCCCTTCTAGCACACGCATTGATCCAGCCATTAATGAATaGCATTATCTTCTTCACCTG +
Preference number: 5 (lower is better)
Translates to: VQKHEIVSQPTPSSTRIDPAINE*HYLLHL
Trigger: CAGGTGAAGAAGATAATGCAATTCATTAATGGCTGG...ATCAATGCGTGTGCTAGAAGGGGTGGGCTGGGACACAATTTCATGTTTTTGCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CAA 90 bp GATAGACACTTCCTCTCTTTTGATTACAGGGGACCTGCCAGAGGAGATAAGATGACATATCCGGGTGTATaGTGTATGCACCTATACATG +
Preference number: 5 (lower is better)
Translates to: DRHFLSFDYRGPARGDKMTYPGV*CMHLYM
Trigger: CATGTATAGGTGCATACACAATACACCCGGATATGT...CATCTTATCTCCTCTGGCAGGTCCCCTGTAATCAAAAGAGAGGAAGTGTCTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CAA 90 bp CTGCTTTGCATATCTTGTCATGATTCTCTTGGAGCTATGAATGCTCTGTCCAGTTCCTTCTTCCTGAGTTaGAGAATTGTGTCCGAGTGC +
Preference number: 5 (lower is better)
Translates to: LLCISCHDSLGAMNALSSSFFLS*RIVSEC
Trigger: GCACTCGGACACAATTCTCAAACTCAGGAAGAAGGA...ACTGGACAGAGCATTCATAGCTCCAAGAGAATCATGACAAGATATGCAAAGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CAA 90 bp GATAGACACTTCCTCTCTTTTGATTACAGGGGACCTGCCAGAGGAGATAAGATGCAAGGAGTCTCTGCGTaGCCAATCAATATAAACTTG +
Preference number: 5 (lower is better)
Translates to: DRHFLSFDYRGPARGDKMQGVSA*PININL
Trigger: CAAGTTTATATTGATTGGCAACGCAGAGACTCCTTG...CATCTTATCTCCTCTGGCAGGTCCCCTGTAATCAAAAGAGAGGAAGTGTCTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CAA 90 bp AAGAGAAAACTTGCAAGATTGATCTGTGAGTGTCTGAATTCTGCCTCCCAACATGACACTTCCTCTCTTTaGATTACAGGGGACCTGCCA +
Preference number: 5 (lower is better)
Translates to: KRKLARLICECLNSASQHDTSSL*ITGDLP
Trigger: TGGCAGGTCCCCTGTAATCAAAAGAGAGGAAGTGTC...ATGTTGGGAGGCAGAATTCAGACACTCACAGATCAATCTTGCAAGTTTTCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CAA 90 bp TCCCTGCTTTGCATATCTTGTCATGATTCTCTTGGAGCTATGAATGCTCTGTCCCTTTATATCTCGGTCTaGTTCCAGCAGCTTGAATTG +
Preference number: 5 (lower is better)
Translates to: SLLCISCHDSLGAMNALSLYISV*FQQLEL
Trigger: CAATTCAAGCTGCTGGAACAAGACCGAGATATAAAG...GGACAGAGCATTCATAGCTCCAAGAGAATCATGACAAGATATGCAAAGCAGGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CAA 90 bp CTGCTTTGCATATCTTGTCATGATTCTCTTGGAGCTATGAATGCTCTGTCCAGTGAAGCAACCTTCACGTaGAATGTGATATCCTCCATG +
Preference number: 5 (lower is better)
Translates to: LLCISCHDSLGAMNALSSEATFT*NVISSM
Trigger: CATGGAGGATATCACATTCAACGTGAAGGTTGCTTC...ACTGGACAGAGCATTCATAGCTCCAAGAGAATCATGACAAGATATGCAAAGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CAA 90 bp GGAAGGGCTTCTCGAAAGGGAAGGGCTTTCTCCTTATTATCCCTGCTTTGCATATTTTTGAAGATTGTGTaGAGTCGTGACTTTTCCTTG +
Preference number: 5 (lower is better)
Translates to: GRASRKGRAFSLLSLLCIFLKIV*SRDFSL
Trigger: CAAGGAAAAGTCACGACTCAACACAATCTTCAAAAA...TATGCAAAGCAGGGATAATAAGGAGAAAGCCCTTCCCTTTCGAGAAGCCCTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CAA 90 bp TCCCTGCTTTGCATATCTTGTCATGATTCTCTTGGAGCTATGAATGCTCTGTCCAGCTTGCTGATGGAATaGAGCTTCCCAATCTTTTTG +
Preference number: 5 (lower is better)
Translates to: SLLCISCHDSLGAMNALSSLLME*SFPIFL
Trigger: CAAAAAGATTGGGAAGCTCAATTCCATCAGCAAGCT...GGACAGAGCATTCATAGCTCCAAGAGAATCATGACAAGATATGCAAAGCAGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CAA 90 bp ATAATTCAACAGAAACTGTCATTTCCCCAGACATCATGGGAGTATTACATGCAAGTTTTCTCCACAATGTaGCGGATGGTGTGTTCGCCC +
Preference number: 5 (lower is better)
Translates to: IIQQKLSFPQTSWEYYMQVFSTM*RMVCSP
Trigger: GGGCGAACACACCATCCGCAACATTGTGGAGAAAAC...TTGCATGTAATACTCCCATGATGTCTGGGGAAATGACAGTTTCTGTTGAATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CAA 90 bp TTAGCTGAATGGGCAGTTCACTGCAACTTCATAAACTGCAATGATATATGTGGGTGCAAAAACATGAAATaGTGTCCCAGCCCACCCCTT +
Preference number: 5 (lower is better)
Translates to: LAEWAVHCNFINCNDICGCKNMK*CPSPPL
Trigger: AAGGGGTGGGCTGGGACACAATTTCATGTTTTTGCA...CCCACATATATCATTGCAGTTTATGAAGTTGCAGTGAACTGCCCATTCAGCTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CAA 90 bp TTAGCTGAATGGGCAGTTCACTGCAACTTCATAAACTGCAATGATATATGTGGGTCCTTCTTCCTGAGTTaGAGAATTGTGTCCGAGTGC +
Preference number: 5 (lower is better)
Translates to: LAEWAVHCNFINCNDICGSFFLS*RIVSEC
Trigger: GCACTCGGACACAATTCTCAAACTCAGGAAGAAGGA...CCCACATATATCATTGCAGTTTATGAAGTTGCAGTGAACTGCCCATTCAGCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CAA 90 bp GTGCAAAAACATGAAATTGTGTCCCAGCCCACCCCTTCTAGCACACGCATTGATAGAAAACTTGCAAGATaGATCTGTGAGTGTCTGAAT +
Preference number: 5 (lower is better)
Translates to: VQKHEIVSQPTPSSTRIDRKLAR*ICECLN
Trigger: ATTCAGACACTCACAGATCAATCTTGCAAGTTTTCT...ATCAATGCGTGTGCTAGAAGGGGTGGGCTGGGACACAATTTCATGTTTTTGCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CAA 90 bp CACCAAGCATACAACATTAAAGTGTCAATTCGTATCACTAACATTTTCAGGCACTTCCAGCAGCTTGAATaGCCCTGCATAATGTACCGG +
Preference number: 5 (lower is better)
Translates to: HQAYNIKVSIRITNIFRHFQQLE*PCIMYR
Trigger: CCGGTACATTATGCAGGGCAATTCAAGCTGCTGGAA...GTGCCTGAAAATGTTAGTGATACGAATTGACACTTTAATGTTGTATGCTTGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CAA 90 bp CTGCTTTGCATATCTTGTCATGATTCTCTTGGAGCTATGAATGCTCTGTCCAGTAGCTTGCTGATGGAATaGAGCTTCCCAATCTTTTTG +
Preference number: 5 (lower is better)
Translates to: LLCISCHDSLGAMNALSSSLLME*SFPIFL
Trigger: CAAAAAGATTGGGAAGCTCAATTCCATCAGCAAGCT...ACTGGACAGAGCATTCATAGCTCCAAGAGAATCATGACAAGATATGCAAAGCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CAA 90 bp CACCAAGCATACAACATTAAAGTGTCAATTCGTATCACTAACATTTTCAGGCACCAAACCACCACCGTCTaGGTCTGGATGTTCACAAAC +
Preference number: 5 (lower is better)
Translates to: HQAYNIKVSIRITNIFRHQTTTV*VWMFTN
Trigger: GTTTGTGAACATCCAGACCAAGACGGTGGTGGTTTG...GTGCCTGAAAATGTTAGTGATACGAATTGACACTTTAATGTTGTATGCTTGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CAA 90 bp CACCAAGCATACAACATTAAAGTGTCAATTCGTATCACTAACATTTTCAGGCACTTGCCATGGAGATTGTaGCCATACACACAGACCGAG +
Preference number: 5 (lower is better)
Translates to: HQAYNIKVSIRITNIFRHLPWRL*PYTQTE
Trigger: CTCGGTCTGTGTGTATGGCAACAATCTCCATGGCAA...GTGCCTGAAAATGTTAGTGATACGAATTGACACTTTAATGTTGTATGCTTGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CAA 90 bp CACCAAGCATACAACATTAAAGTGTCAATTCGTATCACTAACATTTTCAGGCACAGGTTCACCTCACTGTaGCCATGGAGATTGTTGCCA +
Preference number: 5 (lower is better)
Translates to: HQAYNIKVSIRITNIFRHRFTSL*PWRLLP
Trigger: TGGCAACAATCTCCATGGCAACAGTGAGGTGAACCT...GTGCCTGAAAATGTTAGTGATACGAATTGACACTTTAATGTTGTATGCTTGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CAA 90 bp ATAATTCAACAGAAACTGTCATTTCCCCAGACATCATGGGAGTATTACATGCAAGGAGAAGTCGCACATTaGGATCGGACAGAACCTCTA +
Preference number: 5 (lower is better)
Translates to: IIQQKLSFPQTSWEYYMQGEVAH*DRTEPL
Trigger: TAGAGGTTCTGTCCGATCCAAATGTGCGACTTCTCC...TTGCATGTAATACTCCCATGATGTCTGGGGAAATGACAGTTTCTGTTGAATTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CAA 90 bp AAGAGAAAACTTGCAAGATTGATCTGTGAGTGTCTGAATTCTGCCTCCCAACATTGTGCCTGGCGTCTTTaGTCTAGGGTAACTATAACT +
Preference number: 5 (lower is better)
Translates to: KRKLARLICECLNSASQHCAWRL*SRVTIT
Trigger: AGTTATAGTTACCCTAGACAAAAGACGCCAGGCACA...ATGTTGGGAGGCAGAATTCAGACACTCACAGATCAATCTTGCAAGTTTTCTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CAA 90 bp ATAATTCAACAGAAACTGTCATTTCCCCAGACATCATGGGAGTATTACATGCAAATGACGTACTCTGCTTaGTCACACCAGCTGCAAGAG +
Preference number: 5 (lower is better)
Translates to: IIQQKLSFPQTSWEYYMQMTYSA*SHQLQE
Trigger: CTCTTGCAGCTGGTGTGACAAAGCAGAGTACGTCAT...TTGCATGTAATACTCCCATGATGTCTGGGGAAATGACAGTTTCTGTTGAATTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CAA 90 bp GATAGACACTTCCTCTCTTTTGATTACAGGGGACCTGCCAGAGGAGATAAGATGTTCTTCACCTGCAATTaGCTCAATTTGAAATCCTCT +
Preference number: 5 (lower is better)
Translates to: DRHFLSFDYRGPARGDKMFFTCN*LNLKSS
Trigger: AGAGGATTTCAAATTGAGCAAATTGCAGGTGAAGAA...CATCTTATCTCCTCTGGCAGGTCCCCTGTAATCAAAAGAGAGGAAGTGTCTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CAA 90 bp TCCCTGCTTTGCATATCTTGTCATGATTCTCTTGGAGCTATGAATGCTCTGTCCCCAGCCATTAATGAATaGCATTATCTTCTTCACCTG +
Preference number: 5 (lower is better)
Translates to: SLLCISCHDSLGAMNALSPAINE*HYLLHL
Trigger: CAGGTGAAGAAGATAATGCAATTCATTAATGGCTGG...GGACAGAGCATTCATAGCTCCAAGAGAATCATGACAAGATATGCAAAGCAGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CAA 90 bp ATAATTCAACAGAAACTGTCATTTCCCCAGACATCATGGGAGTATTACATGCAAGACACTTCCTCTCTTTaGATTACAGGGGACCTGCCA +
Preference number: 5 (lower is better)
Translates to: IIQQKLSFPQTSWEYYMQDTSSL*ITGDLP
Trigger: TGGCAGGTCCCCTGTAATCAAAAGAGAGGAAGTGTC...TTGCATGTAATACTCCCATGATGTCTGGGGAAATGACAGTTTCTGTTGAATTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CAA 90 bp GATAGACACTTCCTCTCTTTTGATTACAGGGGACCTGCCAGAGGAGATAAGATGGCTTGGCTTGGTTTATaGCTGATTTTCTTTTCTGAT +
Preference number: 5 (lower is better)
Translates to: DRHFLSFDYRGPARGDKMAWLGL*LIFFSD
Trigger: ATCAGAAAAGAAAATCAGCAATAAACCAAGCCAAGC...CATCTTATCTCCTCTGGCAGGTCCCCTGTAATCAAAAGAGAGGAAGTGTCTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CAA 90 bp CTGCTTTGCATATCTTGTCATGATTCTCTTGGAGCTATGAATGCTCTGTCCAGTATCTTGAGGTACACATaGGGCCCATTAGATAACGTT +
Preference number: 5 (lower is better)
Translates to: LLCISCHDSLGAMNALSSILRYT*GPLDNV
Trigger: AACGTTATCTAATGGGCCCAATGTGTACCTCAAGAT...ACTGGACAGAGCATTCATAGCTCCAAGAGAATCATGACAAGATATGCAAAGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS TCA 90 bp GATGGAATTGAGCTTCCCAATCTTTTTGAAGATTGTGTTGAGTCGTaGCTTTTCCTTGAATGTCTTTGCATAAAGGATTTCTGCCTGCCC +
Preference number: 5 (lower is better)
Translates to: DGIELPNLFEDCVES*LFLECLCIKDFCLP
Trigger: GGGCAGGCAGAAATCCTTTATGCAAAGACATTCAAGGAAAAGTCACGACTCAACACAATCTTCAAAAAGATTGGGAAGCTCAATTCCATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269209.7
ENST00000399218.8
ENST00000578619.1
CDS-3UTR CAA 90 bp TTAGCTGAATGGGCAGTTCACTGCAACTTCATAAACTGCAATGATATATGTGGGCTTTATATCTCGGTCTaGTTCCAGCAGCTTGAATTG +
Preference number: 5 (lower is better)
Translates to: LAEWAVHCNFINCNDICGLYISV*FQQLEL
Trigger: CAATTCAAGCTGCTGGAACAAGACCGAGATATAAAG...CCCACATATATCATTGCAGTTTATGAAGTTGCAGTGAACTGCCCATTCAGCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CAA 90 bp TCCCTGCTTTGCATATCTTGTCATGATTCTCTTGGAGCTATGAATGCTCTGTCCTTTTTGAAGATTGTGTaGAGTCGTGACTTTTCCTTG +
Preference number: 5 (lower is better)
Translates to: SLLCISCHDSLGAMNALSFLKIV*SRDFSL
Trigger: CAAGGAAAAGTCACGACTCAACACAATCTTCAAAAA...GGACAGAGCATTCATAGCTCCAAGAGAATCATGACAAGATATGCAAAGCAGGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CAA 90 bp TCCCTGCTTTGCATATCTTGTCATGATTCTCTTGGAGCTATGAATGCTCTGTCCAATCACGTTTATTCCTaGTTTCTGGCTATCACAATG +
Preference number: 5 (lower is better)
Translates to: SLLCISCHDSLGAMNALSNHVYS*FLAITM
Trigger: CATTGTGATAGCCAGAAACAAGGAATAAACGTGATT...GGACAGAGCATTCATAGCTCCAAGAGAATCATGACAAGATATGCAAAGCAGGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CAA 90 bp TGGGGCATTATCAGTAAGGTAGATTTTTGTCAACAAAGGATTGATGACTGTGAAAGCACAACCTGTCTATaGAGGCCTCAGTTACTTGCT +
Preference number: 5 (lower is better)
Translates to: WGIISKVDFCQQRIDDCESTTCL*RPQLLA
Trigger: AGCAAGTAACTGAGGCCTCAATAGACAGGTTGTGCT...TTCACAGTCATCAATCCTTTGTTGACAAAAATCTACCTTACTGATAATGCCCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583696.1
CDS-3UTR CAA 90 bp CTGCTTTGCATATCTTGTCATGATTCTCTTGGAGCTATGAATGCTCTGTCCAGTTTCTTCACCTGCAATTaGCTCAATTTGAAATCCTCT +
Preference number: 5 (lower is better)
Translates to: LLCISCHDSLGAMNALSSFFTCN*LNLKSS
Trigger: AGAGGATTTCAAATTGAGCAAATTGCAGGTGAAGAA...ACTGGACAGAGCATTCATAGCTCCAAGAGAATCATGACAAGATATGCAAAGCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CAA 90 bp TTAGCTGAATGGGCAGTTCACTGCAACTTCATAAACTGCAATGATATATGTGGGTTATTTGGCTATATTTaGGGCCTCCAGCCATTAATG +
Preference number: 5 (lower is better)
Translates to: LAEWAVHCNFINCNDICGLFGYI*GLQPLM
Trigger: CATTAATGGCTGGAGGCCCAAAATATAGCCAAATAA...CCCACATATATCATTGCAGTTTATGAAGTTGCAGTGAACTGCCCATTCAGCTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CAA 90 bp CTGCTTTGCATATCTTGTCATGATTCTCTTGGAGCTATGAATGCTCTGTCCAGTAGAAAACTTGCAAGATaGATCTGTGAGTGTCTGAAT +
Preference number: 5 (lower is better)
Translates to: LLCISCHDSLGAMNALSSRKLAR*ICECLN
Trigger: ATTCAGACACTCACAGATCAATCTTGCAAGTTTTCT...ACTGGACAGAGCATTCATAGCTCCAAGAGAATCATGACAAGATATGCAAAGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CAA 90 bp ATAATTCAACAGAAACTGTCATTTCCCCAGACATCATGGGAGTATTACATGCAACAAGGAGTCTCTGCGTaGCCAATCAATATAAACTTG +
Preference number: 5 (lower is better)
Translates to: IIQQKLSFPQTSWEYYMQQGVSA*PININL
Trigger: CAAGTTTATATTGATTGGCAACGCAGAGACTCCTTG...TTGCATGTAATACTCCCATGATGTCTGGGGAAATGACAGTTTCTGTTGAATTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CAA 90 bp TTAGCTGAATGGGCAGTTCACTGCAACTTCATAAACTGCAATGATATATGTGGGATGTTAATCTTATACTaGCTAGGCACGATGAGTAGT +
Preference number: 5 (lower is better)
Translates to: LAEWAVHCNFINCNDICGMLILY*LGTMSS
Trigger: ACTACTCATCGTGCCTAGCAAGTATAAGATTAACAT...CCCACATATATCATTGCAGTTTATGAAGTTGCAGTGAACTGCCCATTCAGCTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CAA 90 bp ATAATTCAACAGAAACTGTCATTTCCCCAGACATCATGGGAGTATTACATGCAAATCTTGAGGTACACATaGGGCCCATTAGATAACGTT +
Preference number: 5 (lower is better)
Translates to: IIQQKLSFPQTSWEYYMQILRYT*GPLDNV
Trigger: AACGTTATCTAATGGGCCCAATGTGTACCTCAAGAT...TTGCATGTAATACTCCCATGATGTCTGGGGAAATGACAGTTTCTGTTGAATTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CAA 90 bp CACCAAGCATACAACATTAAAGTGTCAATTCGTATCACTAACATTTTCAGGCACCACACTGTTGAAATATaGCACTGGCTCCTTTATATC +
Preference number: 5 (lower is better)
Translates to: HQAYNIKVSIRITNIFRHHTVEI*HWLLYI
Trigger: GATATAAAGGAGCCAGTGCAATATTTCAACAGTGTG...GTGCCTGAAAATGTTAGTGATACGAATTGACACTTTAATGTTGTATGCTTGGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS-3UTR CAA 90 bp ATAATTCAACAGAAACTGTCATTTCCCCAGACATCATGGGAGTATTACATGCAAATGTTAATCTTATACTaGCTAGGCACGATGAGTAGT +
Preference number: 5 (lower is better)
Translates to: IIQQKLSFPQTSWEYYMQMLILY*LGTMSS
Trigger: ACTACTCATCGTGCCTAGCAAGTATAAGATTAACAT...TTGCATGTAATACTCCCATGATGTCTGGGGAAATGACAGTTTCTGTTGAATTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS TCA 72 bp TGGGGCTGGGAGAGCGAGTCTGTTGCCGCGCTGGCTTaGCTGTGCGAGGAGGGATGGAGGGACTGGTGGACA +
Preference number: 6 (lower is better)
Translates to: WGWESESVAALA*LCEEGWRDWWT
Trigger: TGTCCACCAGTCCCTCCATCCCTCCTCGCACAGTCAAGCCAGCGCGGCAACAGACTCGCTCTCCCAGCCCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS CCA 72 bp CAAGGTGGGGCTGGGAGAGCGAGTCTGTTGCCGCGCTaGCTTGACTGTGCGAGGAGGGATGGAGGGACTGGT +
Preference number: 6 (lower is better)
Translates to: QGGAGRASLLPR*LDCARRDGGTG
Trigger: ACCAGTCCCTCCATCCCTCCTCGCACAGTCAAGCCAGCGCGGCAACAGACTCGCTCTCCCAGCCCCACCTTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS TCA 72 bp CTCCTCTTACCCCTCCTTCCCTCCGCCTCGAGCGTGTaGGGAGGAGCCGCGGGTCTGAGAAACGCCATAGCA +
Preference number: 6 (lower is better)
Translates to: LLLPLLPSASSV*GGAAGLRNAIA
Trigger: TGCTATGGCGTTTCTCAGACCCGCGGCTCCTCCTCACACGCTCGAGGCGGAGGGAAGGAGGGGTAAGAGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269209.7
CDS CCA 72 bp GGTGGACAAAGGCTTTGCGCTTCGGGGTGGAACAGGTaGGGCGTTCAGGAGCCGGCATTCTTCTCTGACGGC +
Preference number: 6 (lower is better)
Translates to: GGQRLCASGWNR*GVQEPAFFSDG
Trigger: GCCGTCAGAGAAGAATGCCGGCTCCTGAACGCCCCACCTGTTCCACCCCGAAGCGCAAAGCCTTTGTCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS CCA 72 bp GGAGGGACTGGTGGACAAAGGCTTTGCGCTTCGGGGTaGAACAGGTGGGGCGTTCAGGAGCCGGCATTCTTC +
Preference number: 6 (lower is better)
Translates to: GGTGGQRLCASG*NRWGVQEPAFF
Trigger: GAAGAATGCCGGCTCCTGAACGCCCCACCTGTTCCACCCCGAAGCGCAAAGCCTTTGTCCACCAGTCCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS CAA 72 bp TGCGAGGAGGGATGGAGGGACTGGTGGACAAAGGCTTaGCGCTTCGGGGTGGAACAGGTGGGGCGTTCAGGA +
Preference number: 6 (lower is better)
Translates to: CEEGWRDWWTKA*RFGVEQVGRSG
Trigger: TCCTGAACGCCCCACCTGTTCCACCCCGAAGCGCAAAGCCTTTGTCCACCAGTCCCTCCATCCCTCCTCGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS GCA 72 bp TCCTCTATAGAGAGTCCTGATAGGTCAGCAGGTGGCTaGCATGGGGAACCGTCGCCACAGGATCTGGGGGCC +
Preference number: 6 (lower is better)
Translates to: SSIESPDRSAGG*HGEPSPQDLGA
Trigger: GGCCCCCAGATCCTGTGGCGACGGTTCCCCATGGCAGCCACCTGCTGACCTATCAGGACTCTCTATAGAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS CCA 72 bp ACAACCAGAGACGCTGCTACTGAATTCTGCAGTGACTaGGCTAGTGGGGCTGGCCAGGAGCTCACAGCCATC +
Preference number: 6 (lower is better)
Translates to: TTRDAATEFCSD*ASGAGQELTAI
Trigger: GATGGCTGTGAGCTCCTGGCCAGCCCCACTAGCCCAGTCACTGCAGAATTCAGTAGCAGCGTCTCTGGTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS CCA 72 bp CGGAGGCGACCTTCTCTTCCACTAGTTTTGGAGCCCTaGGGGGTAAGGCAGGGCATGACGTACTCTGCTTTG +
Preference number: 6 (lower is better)
Translates to: RRRPSLPLVLEP*GVRQGMTYSAL
Trigger: CAAAGCAGAGTACGTCATGCCCTGCCTTACCCCCCAGGGCTCCAAAACTAGTGGAAGAGAAGGTCGCCTCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS CAA 90 bp TTGGGCACGTGGTTGTGGCCAGAGCACCGACCCTTCTTGGGGCTCTaGCATTCTTCATTCCAGTCGGTTTTCACATCACGGACAGCCCGT +
Preference number: 6 (lower is better)
Translates to: LGTWLWPEHRPFLGL*HSSFQSVFTSRTAR
Trigger: ACGGGCTGTCCGTGATGTGAAAACCGACTGGAATGAAGAATGCAAGAGCCCCAAGAAGGGTCGGTGCTCTGGCCACAACCACGTGCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS TCA 72 bp ACTGATCACATCTGTTCTTCTCGCTCAGAGAGCGAGTaGGAGGCTGATGGCTGGGCTTGCCTTCCTCCAGCC +
Preference number: 6 (lower is better)
Translates to: TDHICSSRSESE*EADGWACLPPA
Trigger: GGCTGGAGGAAGGCAAGCCCAGCCATCAGCCTCTCACTCGCTCTCTGAGCGAGAAGAACAGATGTGATCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS CCA 72 bp ATAGCGGTGCCCCTCACGGATGAAGTGGAGGTCGTATaGGTTTCTCGGTGGAGGGCTTGGCACAGTCACATT +
Preference number: 6 (lower is better)
Translates to: IAVPLTDEVEVV*VSRWRAWHSHI
Trigger: AATGTGACTGTGCCAAGCCCTCCACCGAGAAACCCATACGACCTCCACTTCATCCGTGAGGGGCACCGCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS CAA 90 bp CTGAGCGAATTGGGCACGTGGTTGTGGCCAGAGCACCGACCCTTCTaGGGGCTCTTGCATTCTTCATTCCAGTCGGTTTTCACATCACGG +
Preference number: 6 (lower is better)
Translates to: LSELGTWLWPEHRPF*GLLHSSFQSVFTSR
Trigger: CCGTGATGTGAAAACCGACTGGAATGAAGAATGCAAGAGCCCCAAGAAGGGTCGGTGCTCTGGCCACAACCACGTGCCCAATTCGCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS TCA 72 bp GGATGTTCACAAACTTATAGCGGTGCCCCTCACGGATaGAGTGGAGGTCGTATGGGTTTCTCGGTGGAGGGC +
Preference number: 6 (lower is better)
Translates to: GCSQTYSGAPHG*SGGRMGFSVEG
Trigger: GCCCTCCACCGAGAAACCCATACGACCTCCACTTCATCCGTGAGGGGCACCGCTATAAGTTTGTGAACATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS TCA 72 bp TCGATGTCGAACTGTTCTTGGCAGATACCTAGCCAGTaGTGGACCAGGGTTTCGGGCCAGCTCTCTCCCTTC +
Preference number: 6 (lower is better)
Translates to: SMSNCSWQIPSQ*WTRVSGQLSPF
Trigger: GAAGGGAGAGAGCTGGCCCGAAACCCTGGTCCATCACTGGCTAGGTATCTGCCAAGAACAGTTCGACATCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS CCA 72 bp TGGGCACGTGGTTGTGGCCAGAGCACCGACCCTTCTTaGGGCTCTTGCATTCTTCATTCCAGTCGGTTTTCA +
Preference number: 6 (lower is better)
Translates to: WARGCGQSTDPS*GSCILHSSRFS
Trigger: TGAAAACCGACTGGAATGAAGAATGCAAGAGCCCCAAGAAGGGTCGGTGCTCTGGCCACAACCACGTGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS CAA 72 bp TTGGGCACGTGGTTGTGGCCAGAGCACCGACCCTTCTaGGGGCTCTTGCATTCTTCATTCCAGTCGGTTTTC +
Preference number: 6 (lower is better)
Translates to: LGTWLWPEHRPF*GLLHSSFQSVF
Trigger: GAAAACCGACTGGAATGAAGAATGCAAGAGCCCCAAGAAGGGTCGGTGCTCTGGCCACAACCACGTGCCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS GCA 72 bp GGTTGTGGCCAGAGCACCGACCCTTCTTGGGGCTCTTaGATTCTTCATTCCAGTCGGTTTTCACATCACGGA +
Preference number: 6 (lower is better)
Translates to: GCGQSTDPSWGS*ILHSSRFSHHG
Trigger: TCCGTGATGTGAAAACCGACTGGAATGAAGAATGCAAGAGCCCCAAGAAGGGTCGGTGCTCTGGCCACAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS CCA 72 bp GTGGAGGGCTTGGCACAGTCACATTCACAGGAAGCCTaGTTTTCTCCACAATGTTGCGGATGGTGTGTTCGC +
Preference number: 6 (lower is better)
Translates to: VEGLAQSHSQEA*FSPQCCGWCVR
Trigger: GCGAACACACCATCCGCAACATTGTGGAGAAAACCAGGCTTCCTGTGAATGTGACTGTGCCAAGCCCTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS CAA 72 bp TGGTTGTGGCCAGAGCACCGACCCTTCTTGGGGCTCTaGCATTCTTCATTCCAGTCGGTTTTCACATCACGG +
Preference number: 6 (lower is better)
Translates to: WLWPEHRPFLGL*HSSFQSVFTSR
Trigger: CCGTGATGTGAAAACCGACTGGAATGAAGAATGCAAGAGCCCCAAGAAGGGTCGGTGCTCTGGCCACAACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS GCA 72 bp AGGCTGAACTTGGGGACAGTCAAGTGCAAAGGAAAGTaGATGGGGAGGATCTTGTTGTTCCGCAGCACACAG +
Preference number: 6 (lower is better)
Translates to: RLNLGTVKCKGK*MGRILLFRSTQ
Trigger: CTGTGTGCTGCGGAACAACAAGATCCTCCCCATGCACTTTCCTTTGCACTTGACTGTCCCCAAGTTCAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS GCA 72 bp CCAGGTCCCTGCAACCATGAAGGTTCACCTCACTGTTaGCATGGAGATTGTTGCCATACACACAGACCGAGA +
Preference number: 6 (lower is better)
Translates to: PGPCNHEGSPHC*HGDCCHTHRPR
Trigger: TCTCGGTCTGTGTGTATGGCAACAATCTCCATGGCAACAGTGAGGTGAACCTTCATGGTTGCAGGGACCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS CCA 72 bp TGTTGTTCCGCAGCACACAGCAAACCACCACCGTCTTaGTCTGGATGTTCACAAACTTATAGCGGTGCCCCT +
Preference number: 6 (lower is better)
Translates to: CCSAAHSKPPPS*SGCSQTYSGAP
Trigger: AGGGGCACCGCTATAAGTTTGTGAACATCCAGACCAAGACGGTGGTGGTTTGCTGTGTGCTGCGGAACAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS CAA 90 bp AAGCCTGGTTTTCTCCACAATGTTGCGGATGGTGTGTTCGCCCTCTaGCATCTGAAGTTCCAGGGGACTTCGGGTGCTAAATCTGCCCTT +
Preference number: 6 (lower is better)
Translates to: KPGFLHNVADGVFAL*HLKFQGTSGAKSAL
Trigger: AAGGGCAGATTTAGCACCCGAAGTCCCCTGGAACTTCAGATGCAAGAGGGCGAACACACCATCCGCAACATTGTGGAGAAAACCAGGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS CAA 90 bp GAGACCAGTCTGGGCAATGTGATAAAACCCTGTCTGGCTTCAGATTaGGGAGGCACTGGAGGTGGAGGTAGGGCAGTATCTGAAGACTTC +
Preference number: 6 (lower is better)
Translates to: ETSLGNVIKPCLASD*GGTGGGGRAVSEDF
Trigger: GAAGTCTTCAGATACTGCCCTACCTCCACCTCCAGTGCCTCCCAAATCTGAAGCCAGACAGGGTTTTATCACATTGCCCAGACTGGTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583696.1
CDS GCA 72 bp CATGAAGGTTCACCTCACTGTTGCCATGGAGATTGTTaGCATACACACAGACCGAGAGTCGGTGGAAGGACT +
Preference number: 6 (lower is better)
Translates to: HEGSPHCCHGDC*HTHRPRVGGRT
Trigger: AGTCCTTCCACCGACTCTCGGTCTGTGTGTATGGCAACAATCTCCATGGCAACAGTGAGGTGAACCTTCATG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS CAA 72 bp TTTCTCCACAATGTTGCGGATGGTGTGTTCGCCCTCTaGCATCTGAAGTTCCAGGGGACTTCGGGTGCTAAA +
Preference number: 6 (lower is better)
Translates to: FLHNVADGVFAL*HLKFQGTSGAK
Trigger: TTTAGCACCCGAAGTCCCCTGGAACTTCAGATGCAAGAGGGCGAACACACCATCCGCAACATTGTGGAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS CAA 72 bp AAATACTGGTCCTCCGAGAGATCTGGTGACCCAGACTaGGGGTCTTCCTCAGCACCATCAATTTTCAGAGGC +
Preference number: 6 (lower is better)
Translates to: KYWSSERSGDPD*GSSSAPSIFRG
Trigger: GCCTCTGAAAATTGATGGTGCTGAGGAAGACCCCAAGTCTGGGTCACCAGATCTCTCGGAGGACCAGTATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS CAA 72 bp TGCCCTCAAAATCACCCAGAAGACCGTGAAAACAGATaGCTGGGCCTCACCGTGTCTGATTCAGAAGGTGTC +
Preference number: 6 (lower is better)
Translates to: CPQNHPEDRENR*LGLTVSDSEGV
Trigger: GACACCTTCTGAATCAGACACGGTGAGGCCCAGCAATCTGTTTTCACGGTCTTCTGGGTGATTTTGAGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578619.1
CDS CCA 72 bp TGGCGTCTTTTGTCTAGGGTAACTATAACTCCTGCTTaGATCCAGCAGGAAGTCACTCCTGGTCTGGCTTTC +
Preference number: 6 (lower is better)
Translates to: WRLLSRVTITPA*IQQEVTPGLAF
Trigger: GAAAGCCAGACCAGGAGTGACTTCCTGCTGGATCCAAGCAGGAGTTATAGTTACCCTAGACAAAAGACGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS CCA 72 bp GAGAAGATGTCCTGCATGCCCTTTTTAACAAAATACTaGTCCTCCGAGAGATCTGGTGACCCAGACTTGGGG +
Preference number: 6 (lower is better)
Translates to: EKMSCMPFLTKY*SSERSGDPDLG
Trigger: CCCCAAGTCTGGGTCACCAGATCTCTCGGAGGACCAGTATTTTGTTAAAAAGGGCATGCAGGACATCTTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS CCA 72 bp CTCAAAATCACCCAGAAGACCGTGAAAACAGATTGCTaGGCCTCACCGTGTCTGATTCAGAAGGTGTCGGAT +
Preference number: 6 (lower is better)
Translates to: LKITQKTVKTDC*ASPCLIQKVSD
Trigger: ATCCGACACCTTCTGAATCAGACACGGTGAGGCCCAGCAATCTGTTTTCACGGTCTTCTGGGTGATTTTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578619.1
CDS CAA 90 bp CTCCACACTGTTGAAATATTGCACTGGCTCCTTTATATCTCGGTCTaGTTCCAGCAGCTTGAATTGCCCTCAAAATCACCCAGAAGACCG +
Preference number: 6 (lower is better)
Translates to: LHTVEILHWLLYISV*FQQLELPSKSPRRP
Trigger: CGGTCTTCTGGGTGATTTTGAGGGCAATTCAAGCTGCTGGAACAAGACCGAGATATAAAGGAGCCAGTGCAATATTTCAACAGTGTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578619.1
CDS TCA 72 bp TTCATTCCAGTCGGTTTTCACATCACGGACAGCCCGTaGATACTCATCGATGTCGAACTGTTCTTGGCAGAT +
Preference number: 6 (lower is better)
Translates to: FIPVGFHITDSP*ILIDVELFLAD
Trigger: ATCTGCCAAGAACAGTTCGACATCGATGAGTATTCACGGGCTGTCCGTGATGTGAAAACCGACTGGAATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS TCA 72 bp CTGGCTCCTTTATATCTCGGTCTTGTTCCAGCAGCTTaGATTGCCCTCAAAATCACCCAGAAGACCGTGAAA +
Preference number: 6 (lower is better)
Translates to: LAPLYLGLVPAA*IALKITQKTVK
Trigger: TTTCACGGTCTTCTGGGTGATTTTGAGGGCAATTCAAGCTGCTGGAACAAGACCGAGATATAAAGGAGCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578619.1
CDS CAA 72 bp ACTGGCTCCTTTATATCTCGGTCTTGTTCCAGCAGCTaGAATTGCCCTCAAAATCACCCAGAAGACCGTGAA +
Preference number: 6 (lower is better)
Translates to: TGSFISRSCSSS*NCPQNHPEDRE
Trigger: TTCACGGTCTTCTGGGTGATTTTGAGGGCAATTCAAGCTGCTGGAACAAGACCGAGATATAAAGGAGCCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578619.1
CDS CAA 90 bp CTCCACACTGTTGAAATATTGCACTGGCTCCTTTATATCTCGGTCTaGTTCCAGCAGCTTGAATTGCCCTGCATAATGTACCGGAATCTC +
Preference number: 6 (lower is better)
Translates to: LHTVEILHWLLYISV*FQQLELPCIMYRNL
Trigger: GAGATTCCGGTACATTATGCAGGGCAATTCAAGCTGCTGGAACAAGACCGAGATATAAAGGAGCCAGTGCAATATTTCAACAGTGTGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS CAA 90 bp AAGAATGATATGACATCTTCGGACAAACCAATGAACCGTAGTGACTaGGACACTTCCTCTATAGAGAGTCCTGATAGGTCAGCAGGTGGC +
Preference number: 6 (lower is better)
Translates to: KNDMTSSDKPMNRSD*DTSSIESPDRSAGG
Trigger: GCCACCTGCTGACCTATCAGGACTCTCTATAGAGGAAGTGTCCAAGTCACTACGGTTCATTGGTTTGTCCGAAGATGTCATATCATTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS GCA 72 bp TCCTTTATATCTCGGTCTTGTTCCAGCAGCTTGAATTaGCCTCAAAATCACCCAGAAGACCGTGAAAACAGA +
Preference number: 6 (lower is better)
Translates to: SFISRSCSSSLN*PQNHPEDRENR
Trigger: TCTGTTTTCACGGTCTTCTGGGTGATTTTGAGGGCAATTCAAGCTGCTGGAACAAGACCGAGATATAAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578619.1
CDS CAA 72 bp ATGACATCTTCGGACAAACCAATGAACCGTAGTGACTaGGACACTTCCTCTATAGAGAGTCCTGATAGGTCA +
Preference number: 6 (lower is better)
Translates to: MTSSDKPMNRSD*DTSSIESPDRS
Trigger: TGACCTATCAGGACTCTCTATAGAGGAAGTGTCCAAGTCACTACGGTTCATTGGTTTGTCCGAAGATGTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS CAA 72 bp GTTGAAATATTGCACTGGCTCCTTTATATCTCGGTCTaGTTCCAGCAGCTTGAATTGCCCTCAAAATCACCC +
Preference number: 6 (lower is better)
Translates to: VEILHWLLYISV*FQQLELPSKSP
Trigger: GGGTGATTTTGAGGGCAATTCAAGCTGCTGGAACAAGACCGAGATATAAAGGAGCCAGTGCAATATTTCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578619.1
CDS CAA 90 bp AAATATTGCACTGGCTCCTTTATATCTCGGTCTTGTTCCAGCAGCTaGAATTGCCCTCAAAATCACCCAGAAGACCGTGAAAACAGATTG +
Preference number: 6 (lower is better)
Translates to: KYCTGSFISRSCSSS*NCPQNHPEDRENRL
Trigger: CAATCTGTTTTCACGGTCTTCTGGGTGATTTTGAGGGCAATTCAAGCTGCTGGAACAAGACCGAGATATAAAGGAGCCAGTGCAATATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578619.1
CDS CAA 72 bp GTTGAAATATTGCACTGGCTCCTTTATATCTCGGTCTaGTTCCAGCAGCTTGAATTGCCCTGCATAATGTAC +
Preference number: 6 (lower is better)
Translates to: VEILHWLLYISV*FQQLELPCIMY
Trigger: GTACATTATGCAGGGCAATTCAAGCTGCTGGAACAAGACCGAGATATAAAGGAGCCAGTGCAATATTTCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS TCA 72 bp AATTTGAAATCCTCTGAGAGGATTTCTTCCGTTAGCTaGACAAGCAGGTTCCCATCAATCTTTTCAGTAACA +
Preference number: 6 (lower is better)
Translates to: NLKSSERISSVS*TSRFPSIFSVT
Trigger: TGTTACTGAAAAGATTGATGGGAACCTGCTTGTTCAGCTAACGGAAGAAATCCTCTCAGAGGATTTCAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8
CDS TCA 72 bp GAGCTTCCCAATCTTTTTGAAGATTGTGTTGAGTCGTaGCTTTTCCTTGAATGTCTTTGCATAAAGGATTTC +
Preference number: 6 (lower is better)
Translates to: ELPNLFEDCVES*LFLECLCIKDF
Trigger: GAAATCCTTTATGCAAAGACATTCAAGGAAAAGTCACGACTCAACACAATCTTCAAAAAGATTGGGAAGCTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269209.7
ENST00000399218.8
ENST00000578619.1
CDS CAA 72 bp CCATTAATGAATTGCATTATCTTCTTCACCTGCAATTaGCTCAATTTGAAATCCTCTGAGAGGATTTCTTCC +
Preference number: 6 (lower is better)
Translates to: PLMNCIIFFTCN*LNLKSSERISS
Trigger: GGAAGAAATCCTCTCAGAGGATTTCAAATTGAGCAAATTGCAGGTGAAGAAGATAATGCAATTCATTAATGG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269209.7
ENST00000399218.8