Pregenerated sensors for GAR1-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000272795Ensembl transcript IDs: ENST00000609440.1
Found 5 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GGTTGGGAAGAAACAAGAAACTCAGATAAACGCTTCCGTCGGCTGTaGCAGGTTCTGAGGCGCCCAGATCTACTGGACATAGCGCGGCTC | + |
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Preference number: 5 (lower is better) Translates to: GWEETRNSDKRFRRL*QVLRRPDLLDIARL Trigger: GAGCCGCGCTATGTCCAGTAGATCTGGGCGCCTCAGAACCTGTCACAGCCGACGGAAGCGTTTATCTGAGTTTCTTGTTTCTTCCCAACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000609440.1 |
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| CDS GCA 90 bp | GTGCTGTTGCGGGCCATTTTGCAGCCAGAGAAGCAAATGCGCAAATaGGCCCAGCCAGTCAGCACGGACTTCAAGAACCAACTTCATTCC | + |
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Preference number: 5 (lower is better) Translates to: VLLRAILQPEKQMRK*AQPVSTDFKNQLHS Trigger: GGAATGAAGTTGGTTCTTGAAGTCCGTGCTGACTGGCTGGGCGCATTTGCGCATTTGCTTCTCTGGCTGCAAAATGGCCCGCAACAGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000609440.1 |
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| CDS GCA 72 bp | CGGGCCATTTTGCAGCCAGAGAAGCAAATGCGCAAATaGGCCCAGCCAGTCAGCACGGACTTCAAGAACCAA | + |
|
Preference number: 6 (lower is better) Translates to: RAILQPEKQMRK*AQPVSTDFKNQ Trigger: TTGGTTCTTGAAGTCCGTGCTGACTGGCTGGGCGCATTTGCGCATTTGCTTCTCTGGCTGCAAAATGGCCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000609440.1 |
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| CDS CAA 90 bp | TGCGCCCAGCCAGTCAGCACGGACTTCAAGAACCAACTTCATTCCTaGCAAGGTGCTTTAGTTCTGGCCGTTAGGGCGGCAACCAAACAG | + |
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Preference number: 6 (lower is better) Translates to: CAQPVSTDFKNQLHS*QGALVLAVRAATKQ Trigger: CTGTTTGGTTGCCGCCCTAACGGCCAGAACTAAAGCACCTTGCAAGGAATGAAGTTGGTTCTTGAAGTCCGTGCTGACTGGCTGGGCGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000609440.1 |
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| CDS CAA 72 bp | CCAGTCAGCACGGACTTCAAGAACCAACTTCATTCCTaGCAAGGTGCTTTAGTTCTGGCCGTTAGGGCGGCA | + |
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Preference number: 6 (lower is better) Translates to: PVSTDFKNQLHS*QGALVLAVRAA Trigger: TGCCGCCCTAACGGCCAGAACTAAAGCACCTTGCAAGGAATGAAGTTGGTTCTTGAAGTCCGTGCTGACTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000609440.1 |
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