RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GAPVD1 (Homo sapiens)

Ensembl gene IDs: ENSG00000165219

Ensembl transcript IDs: ENST00000265956.8, ENST00000297933.11, ENST00000312123.13, ENST00000394083.6, ENST00000394084.5, ENST00000394104.6, ENST00000394105.6, ENST00000431329.5, ENST00000436712.2, ENST00000461379.5, ENST00000467707.1, ENST00000467750.5, ENST00000469498.1, ENST00000470056.5, ENST00000474637.5, ENST00000479511.1, ENST00000495955.5, ENST00000497580.5

Found 1559 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGTCTACCCTCAGCCCCGGCTCCAACACAGCACAGCCCTATCTCCTaGCTCCAGTGTAGCCCTTCACCCCAATCCCACCACCTTCTCTTC +
Preference number: 1 (lower is better)
Translates to: GLPSAPAPTQHSPIS*LQCSPSPQSHHLLF
Trigger: GAAGAGAAGGTGGTGGGATTGGGGTGAAGGGCTACACTGGAGGCAGGAGATAGGGCTGTGCTGTGTTGGAGCCGGGGCTGAGGGTAGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
3UTR CCA 90 bp AGCACCAATGGCTGCAGCTGGAGGGAGTTCTCGCTCTTCATTTCCTaGACGCCGGTTCCAGCTGGGGTCACTCATGGGTCTCCGGACAGA +
Preference number: 1 (lower is better)
Translates to: STNGCSWREFSLFIS*TPVPAGVTHGSPDR
Trigger: TCTGTCCGGAGACCCATGAGTGACCCCAGCTGGAACCGGCGTCCAGGAAATGAAGAGCGAGAACTCCCTCCAGCTGCAGCCATTGGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
3UTR CCA 90 bp TCCCACAGCTCCTTCCAGGATTGGGGGATCTGGTGGTGGATGCGATaGCCTAGCATAGTGAACCTTTGGCCTTACCACAGCAGAAGCCCC +
Preference number: 1 (lower is better)
Translates to: SHSSFQDWGIWWWMR*PSIVNLWPYHSRSP
Trigger: GGGGCTTCTGCTGTGGTAAGGCCAAAGGTTCACTATGCTAGGCCATCGCATCCACCACCAGATCCCCCAATCCTGGAAGGAGCTGTGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
3UTR CCA 90 bp CTGGAGGGAGTTCTCGCTCTTCATTTCCTGGACGCCGGTTCCAGCTaGGGTCACTCATGGGTCTCCGGACAGAAGATACTATATCAGAGC +
Preference number: 1 (lower is better)
Translates to: LEGVLALHFLDAGSS*GHSWVSGQKILYQS
Trigger: GCTCTGATATAGTATCTTCTGTCCGGAGACCCATGAGTGACCCCAGCTGGAACCGGCGTCCAGGAAATGAAGAGCGAGAACTCCCTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
3UTR GCA 90 bp AGATTTTCAGAGGAAACCTTAGCTGCCCCTGCAACAGCTGTGCTGTaGTCCTCCGCCAGCTATGGAGTCATGAGCACCCGAACCCATTTC +
Preference number: 1 (lower is better)
Translates to: RFSEETLAAPATAVL*SSASYGVMSTRTHF
Trigger: GAAATGGGTTCGGGTGCTCATGACTCCATAGCTGGCGGAGGAGCACAGCACAGCTGTTGCAGGGGCAGCTAAGGTTTCCTCTGAAAATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
3UTR CCA 90 bp CTCGCTCTTCATTTCCTGGACGCCGGTTCCAGCTGGGGTCACTCATaGGTCTCCGGACAGAAGATACTATATCAGAGCTCCTGCTTCGAA +
Preference number: 1 (lower is better)
Translates to: LALHFLDAGSSWGHS*VSGQKILYQSSCFE
Trigger: TTCGAAGCAGGAGCTCTGATATAGTATCTTCTGTCCGGAGACCCATGAGTGACCCCAGCTGGAACCGGCGTCCAGGAAATGAAGAGCGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
3UTR TCA 90 bp GTCTCTCCTCTTGAGGAGTCCTTACTCGGGGATGAAGATGATGAATaGGGTGCAGCCACCAAAGAAGTAGCACCAATGGCTGCAGCTGGA +
Preference number: 1 (lower is better)
Translates to: VSPLEESLLGDEDDE*GAATKEVAPMAAAG
Trigger: TCCAGCTGCAGCCATTGGTGCTACTTCTTTGGTGGCTGCACCTCATTCATCATCTTCATCCCCGAGTAAGGACTCCTCAAGAGGAGAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
3UTR CCA 90 bp CCATTTCAGCTGGAGTTAAAACATGGGAACCAAAGTTTGGCAACCTaGCCTCATTTCCTCCCACAGCTCCTTCCAGGATTGGGGGATCTG +
Preference number: 1 (lower is better)
Translates to: PFQLELKHGNQSLAT*PHFLPQLLPGLGDL
Trigger: CAGATCCCCCAATCCTGGAAGGAGCTGTGGGAGGAAATGAGGCCAGGTTGCCAAACTTTGGTTCCCATGTTTTAACTCCAGCTGAAATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
3UTR TCA 90 bp CAGCTACAGATTCTTACGGCAAGAACACAGCCCCCGTATTGGGGCTaGGATTGTTCTCTTGCTCACGCACCTCAGGGACACATTTGTAAA +
Preference number: 1 (lower is better)
Translates to: QLQILTARTQPPYWG*DCSLAHAPQGHICK
Trigger: TTTACAAATGTGTCCCTGAGGTGCGTGAGCAAGAGAACAATCTCAGCCCCAATACGGGGGCTGTGTTCTTGCCGTAAGAATCTGTAGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
3UTR CCA 90 bp AACCAGACAGTGATGGCCCATGTACAAGACTTGTGCTTGAAGCTTTaGTGTGCCTCCATGGCCAATTTTTCAGGCACCAAAACCCATTCC +
Preference number: 1 (lower is better)
Translates to: NQTVMAHVQDLCLKL*CASMANFSGTKTHS
Trigger: GGAATGGGTTTTGGTGCCTGAAAAATTGGCCATGGAGGCACACCAAAGCTTCAAGCACAAGTCTTGTACATGGGCCATCACTGTCTGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
3UTR CCA 90 bp AGACAGGAGAGTATTAATTTGACAGAGGTGAATTCCCCTAGTGCATaGCCGCTACCCACACTGTCTGCCATTATCCAAGTGGAGACGTCA +
Preference number: 1 (lower is better)
Translates to: RQESINLTEVNSPSA*PLPTLSAIIQVETS
Trigger: TGACGTCTCCACTTGGATAATGGCAGACAGTGTGGGTAGCGGCCATGCACTAGGGGAATTCACCTCTGTCAAATTAATACTCTCCTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
3UTR GCA 90 bp GACAGTGATGGCCCATGTACAAGACTTGTGCTTGAAGCTTTGGTGTaGCTCCATGGCCAATTTTTCAGGCACCAAAACCCATTCCTGATT +
Preference number: 1 (lower is better)
Translates to: DSDGPCTRLVLEALV*LHGQFFRHQNPFLI
Trigger: AATCAGGAATGGGTTTTGGTGCCTGAAAAATTGGCCATGGAGGCACACCAAAGCTTCAAGCACAAGTCTTGTACATGGGCCATCACTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
3UTR CCA 90 bp GAATGCCTTTGCTTGAATGCCTCCATTTCAGCTGGAGTTAAAACATaGGAACCAAAGTTTGGCAACCTGGCCTCATTTCCTCCCACAGCT +
Preference number: 1 (lower is better)
Translates to: ECLCLNASISAGVKT*EPKFGNLASFPPTA
Trigger: AGCTGTGGGAGGAAATGAGGCCAGGTTGCCAAACTTTGGTTCCCATGTTTTAACTCCAGCTGAAATGGAGGCATTCAAGCAAAGGCATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
3UTR TCA 90 bp AGCTCCTGCTTCGAACTAGTCTCTCAGGGTAAGAATGCCTTTGCTTaGATGCCTCCATTTCAGCTGGAGTTAAAACATGGGAACCAAAGT +
Preference number: 1 (lower is better)
Translates to: SSCFELVSQGKNAFA*MPPFQLELKHGNQS
Trigger: ACTTTGGTTCCCATGTTTTAACTCCAGCTGAAATGGAGGCATTCAAGCAAAGGCATTCTTACCCTGAGAGACTAGTTCGAAGCAGGAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
3UTR CCA 90 bp GCTAGAAACTTAAGCCCAGCAAGTCTTACAGAGGAGTTGAGACATTaGCTCTCTGAAAGAGATTCTGGGGCTTTGCTTCTTATTGCTAAT +
Preference number: 1 (lower is better)
Translates to: ARNLSPASLTEELRH*LSERDSGALLLIAN
Trigger: ATTAGCAATAAGAAGCAAAGCCCCAGAATCTCTTTCAGAGAGCCAATGTCTCAACTCCTCTGTAAGACTTGCTGGGCTTAAGTTTCTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497580.5
3UTR GCA 90 bp CGAGAGAACCTGCTTGTTAGCTCATTAACCTGTTTAGTAAAGATCTaGTTTAAAATGCCTGATGCTGTGCAGTATCATACAAAACAATCT +
Preference number: 1 (lower is better)
Translates to: RENLLVSSLTCLVKI*FKMPDAVQYHTKQS
Trigger: AGATTGTTTTGTATGATACTGCACAGCATCAGGCATTTTAAAGCAGATCTTTACTAAACAGGTTAATGAGCTAACAAGCAGGTTCTCTCG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
3UTR GCA 90 bp GTTAAATCCTGTAACAATGAATTTCAACCATTCGAAGTCTTCTGCTaGTTAACATTTACTGAATCAAAGGCTGAAGTAAATGGACTCTCA +
Preference number: 1 (lower is better)
Translates to: VKSCNNEFQPFEVFC*LTFTESKAEVNGLS
Trigger: TGAGAGTCCATTTACTTCAGCCTTTGATTCAGTAAATGTTAAGCAGCAGAAGACTTCGAATGGTTGAAATTCATTGTTACAGGATTTAAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
3UTR GCA 90 bp CTCACAGGACTTCTGTGGGGATTAAATGAAACAACATTTATAAAGTaGCTACCCACAGTATGGAACATGGTATATGCTCAATTAATTTTT +
Preference number: 1 (lower is better)
Translates to: LTGLLWGLNETTFIK*LPTVWNMVYAQLIF
Trigger: AAAAATTAATTGAGCATATACCATGTTCCATACTGTGGGTAGGCACTTTATAAATGTTGTTTCATTTAATCCCCACAGAAGTCCTGTGAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394084.5
3UTR-3UTR GCA 90 bp GCCCCCGTATTGGGGCTGAGATTGTTCTCTTGCTCACGCACCTCAGGGACACATCACAGCCCTATCTCCTaGCTCCAGTGTAGCCCTTCA +
Preference number: 2 (lower is better)
Translates to: APVLGLRLFSCSRTSGTHHSPIS*LQCSPS
Trigger: TGAAGGGCTACACTGGAGGCAGGAGATAGGGCTGTG...ATGTGTCCCTGAGGTGCGTGAGCAAGAGAACAATCTCAGCCCCAATACGGGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
3UTR-3UTR GCA 90 bp TCCTCCGCCAGCTATGGAGTCATGAGCACCCGAACCCATTTCACAGGTGTCACAGCCTCCGTGTTCATCTaGCCGAGGCTGTTTGTCACA +
Preference number: 2 (lower is better)
Translates to: SSASYGVMSTRTHFTGVTASVFI*PRLFVT
Trigger: TGTGACAAACAGCCTCGGGCAGATGAACACGGAGGC...TGTGACACCTGTGAAATGGGTTCGGGTGCTCATGACTCCATAGCTGGCGGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
3UTR-3UTR TCA 90 bp AGTTCTCGCTCTTCATTTCCTGGACGCCGGTTCCAGCTGGGGTCACTCATGGGTAGCTGGTGGGCACCGTaGGTTATTTCATCCATGTCT +
Preference number: 2 (lower is better)
Translates to: SSRSSFPGRRFQLGSLMGSWWAP*VISSMS
Trigger: AGACATGGATGAAATAACTCACGGTGCCCACCAGCT...ACCCATGAGTGACCCCAGCTGGAACCGGCGTCCAGGAAATGAAGAGCGAGAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
3UTR-3UTR TCA 90 bp TCCTGGACGCCGGTTCCAGCTGGGGTCACTCATGGGTCTCCGGACAGAAGATACAGAAGCCCCTTCATGTaGAGACAGTGGATCAAACAT +
Preference number: 2 (lower is better)
Translates to: SWTPVPAGVTHGSPDRRYRSPFM*RQWIKH
Trigger: ATGTTTGATCCACTGTCTTCACATGAAGGGGCTTCT...GTATCTTCTGTCCGGAGACCCATGAGTGACCCCAGCTGGAACCGGCGTCCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
3UTR-3UTR TCA 90 bp GCCCCCGTATTGGGGCTGAGATTGTTCTCTTGCTCACGCACCTCAGGGACACATAGCCTTCAAAGCAGCTaGTGCACCTTCTCAGAGATC +
Preference number: 2 (lower is better)
Translates to: APVLGLRLFSCSRTSGTHSLQSS*CTFSEI
Trigger: GATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCT...ATGTGTCCCTGAGGTGCGTGAGCAAGAGAACAATCTCAGCCCCAATACGGGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
3UTR-3UTR TCA 90 bp TCCTCCGCCAGCTATGGAGTCATGAGCACCCGAACCCATTTCACAGGTGTCACAACGAGGTCAGGAGATTaGGGATCATCCTGGCCAACA +
Preference number: 2 (lower is better)
Translates to: SSASYGVMSTRTHFTGVTTRSGD*GSSWPT
Trigger: TGTTGGCCAGGATGATCCTCAATCTCCTGACCTCGT...TGTGACACCTGTGAAATGGGTTCGGGTGCTCATGACTCCATAGCTGGCGGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
3UTR-3UTR GCA 90 bp GCTGGAGGGAGTTCTCGCTCTTCATTTCCTGGACGCCGGTTCCAGCTGGGGTCACTATATCAGAGCTCCTaGTTCGAACTAGTCTCTCAG +
Preference number: 2 (lower is better)
Translates to: AGGSSRSSFPGRRFQLGSLYQSS*FELVSQ
Trigger: CTGAGAGACTAGTTCGAAGCAGGAGCTCTGATATAG...TGACCCCAGCTGGAACCGGCGTCCAGGAAATGAAGAGCGAGAACTCCCTCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
3UTR-3UTR CCA 90 bp CAGCTGGGGTCACTCATGGGTCTCCGGACAGAAGATACTATATCAGAGCTCCTGTGGGGGATCTGGTGGTaGATGCGATGGCCTAGCATA +
Preference number: 2 (lower is better)
Translates to: QLGSLMGLRTEDTISELLWGIWW*MRWPSI
Trigger: TATGCTAGGCCATCGCATCCACCACCAGATCCCCCA...CAGGAGCTCTGATATAGTATCTTCTGTCCGGAGACCCATGAGTGACCCCAGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
3UTR-3UTR CCA 90 bp GTTCCAGCTGGGGTCACTCATGGGTCTCCGGACAGAAGATACTATATCAGAGCTCAGGATTGGGGGATCTaGTGGTGGATGCGATGGCCT +
Preference number: 2 (lower is better)
Translates to: VPAGVTHGSPDRRYYIRAQDWGI*WWMRWP
Trigger: AGGCCATCGCATCCACCACCAGATCCCCCAATCCTG...AGCTCTGATATAGTATCTTCTGTCCGGAGACCCATGAGTGACCCCAGCTGGAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
3UTR-3UTR CCA 90 bp TCCAGCTGGGGTCACTCATGGGTCTCCGGACAGAAGATACTATATCAGAGCTCCAGCTCCTTCCAGGATTaGGGGATCTGGTGGTGGATG +
Preference number: 2 (lower is better)
Translates to: SSWGHSWVSGQKILYQSSSSFQD*GIWWWM
Trigger: CATCCACCACCAGATCCCCCAATCCTGGAAGGAGCT...GGAGCTCTGATATAGTATCTTCTGTCCGGAGACCCATGAGTGACCCCAGCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
3UTR CAA 90 bp CACCAGTCAGCTACAGATTCTTACGGCAAGAACACAGCCCCCGTATaGGGGCTGAGATTGTTCTCTTGCTCACGCACCTCAGGGACACAT +
Preference number: 2 (lower is better)
Translates to: HQSATDSYGKNTAPV*GLRLFSCSRTSGTH
Trigger: ATGTGTCCCTGAGGTGCGTGAGCAAGAGAACAATCTCAGCCCCAATACGGGGGCTGTGTTCTTGCCGTAAGAATCTGTAGCTGACTGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
3UTR-3UTR TCA 90 bp GCCCCCGTATTGGGGCTGAGATTGTTCTCTTGCTCACGCACCTCAGGGACACATGACAGTTACAGCCAATaGAGTGCACGACTCTGTACA +
Preference number: 2 (lower is better)
Translates to: APVLGLRLFSCSRTSGTHDSYSQ*SARLCT
Trigger: TGTACAGAGTCGTGCACTTCATTGGCTGTAACTGTC...ATGTGTCCCTGAGGTGCGTGAGCAAGAGAACAATCTCAGCCCCAATACGGGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
3UTR-3UTR CCA 90 bp GGGTCACTCATGGGTCTCCGGACAGAAGATACTATATCAGAGCTCCTGCTTCGATGGGGGATCTGGTGGTaGATGCGATGGCCTAGCATA +
Preference number: 2 (lower is better)
Translates to: GSLMGLRTEDTISELLLRWGIWW*MRWPSI
Trigger: TATGCTAGGCCATCGCATCCACCACCAGATCCCCCA...TCGAAGCAGGAGCTCTGATATAGTATCTTCTGTCCGGAGACCCATGAGTGACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
3UTR-3UTR CCA 90 bp GGCATGGCTGAAACAAAACGTTTTCTCCACCAAGGTCTGTTCCTGTCTGATTTCGACGCCGGTTCCAGCTaGGGTCACTCATGGGTCTCC +
Preference number: 2 (lower is better)
Translates to: GMAETKRFLHQGLFLSDFDAGSS*GHSWVS
Trigger: GGAGACCCATGAGTGACCCCAGCTGGAACCGGCGTC...GAAATCAGACAGGAACAGACCTTGGTGGAGAAAACGTTTTGTTTCAGCCATGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
3UTR-3UTR CCA 90 bp GCCCCCGTATTGGGGCTGAGATTGTTCTCTTGCTCACGCACCTCAGGGACACATTTTGGTGTGCCTCCATaGCCAATTTTTCAGGCACCA +
Preference number: 2 (lower is better)
Translates to: APVLGLRLFSCSRTSGTHFGVPP*PIFQAP
Trigger: TGGTGCCTGAAAAATTGGCCATGGAGGCACACCAAA...ATGTGTCCCTGAGGTGCGTGAGCAAGAGAACAATCTCAGCCCCAATACGGGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
3UTR-3UTR TCA 90 bp GCCCCCGTATTGGGGCTGAGATTGTTCTCTTGCTCACGCACCTCAGGGACACATAGTAGTCCTTGCTCCTaGCAGATTTTCAGAGGAAAC +
Preference number: 2 (lower is better)
Translates to: APVLGLRLFSCSRTSGTHSSPCS*QIFRGN
Trigger: GTTTCCTCTGAAAATCTGTCAGGAGCAAGGACTACT...ATGTGTCCCTGAGGTGCGTGAGCAAGAGAACAATCTCAGCCCCAATACGGGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
3UTR-3UTR GCA 90 bp GCCCCCGTATTGGGGCTGAGATTGTTCTCTTGCTCACGCACCTCAGGGACACATAAAGATGCCTGGAAATaGTCCCAACAACAAGGGACT +
Preference number: 2 (lower is better)
Translates to: APVLGLRLFSCSRTSGTHKDAWK*SQQQGT
Trigger: AGTCCCTTGTTGTTGGGAGCATTTCCAGGCATCTTT...ATGTGTCCCTGAGGTGCGTGAGCAAGAGAACAATCTCAGCCCCAATACGGGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
3UTR-3UTR CCA 90 bp TCCTCCCACAGCTCCTTCCAGGATTGGGGGATCTGGTGGTGGATGCGATGGCCTGGTCTTCAATCTTATTaGGAATATCCTCAGAGGTTG +
Preference number: 2 (lower is better)
Translates to: SSHSSFQDWGIWWWMRWPGLQSY*EYPQRL
Trigger: CAACCTCTGAGGATATTCCCAATAAGATTGAAGACC...AGGCCATCGCATCCACCACCAGATCCCCCAATCCTGGAAGGAGCTGTGGGAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
3UTR-3UTR TCA 90 bp GGGTCACTCATGGGTCTCCGGACAGAAGATACTATATCAGAGCTCCTGCTTCGAAGCTGGTGGGCACCGTaGGTTATTTCATCCATGTCT +
Preference number: 2 (lower is better)
Translates to: GSLMGLRTEDTISELLLRSWWAP*VISSMS
Trigger: AGACATGGATGAAATAACTCACGGTGCCCACCAGCT...TCGAAGCAGGAGCTCTGATATAGTATCTTCTGTCCGGAGACCCATGAGTGACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
3UTR-3UTR GCA 90 bp TCCTCCGCCAGCTATGGAGTCATGAGCACCCGAACCCATTTCACAGGTGTCACACTTGAAGCTTTGGTGTaGCTCCATGGCCAATTTTTC +
Preference number: 2 (lower is better)
Translates to: SSASYGVMSTRTHFTGVTLEALV*LHGQFF
Trigger: GAAAAATTGGCCATGGAGGCACACCAAAGCTTCAAG...TGTGACACCTGTGAAATGGGTTCGGGTGCTCATGACTCCATAGCTGGCGGAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
3UTR-3UTR GCA 90 bp GCCCCCGTATTGGGGCTGAGATTGTTCTCTTGCTCACGCACCTCAGGGACACATAGAAAAGAGCCCCGATaGAATGTCCACATCTTCATA +
Preference number: 2 (lower is better)
Translates to: APVLGLRLFSCSRTSGTHRKEPR*NVHIFI
Trigger: TATGAAGATGTGGACATTGCATCGGGGCTCTTTTCT...ATGTGTCCCTGAGGTGCGTGAGCAAGAGAACAATCTCAGCCCCAATACGGGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
3UTR CAA 90 bp TTACGGCAAGAACACAGCCCCCGTATTGGGGCTGAGATTGTTCTCTaGCTCACGCACCTCAGGGACACATTTGTAAAGCCCACTTTAAAC +
Preference number: 2 (lower is better)
Translates to: LRQEHSPRIGAEIVL*LTHLRDTFVKPTLN
Trigger: GTTTAAAGTGGGCTTTACAAATGTGTCCCTGAGGTGCGTGAGCAAGAGAACAATCTCAGCCCCAATACGGGGGCTGTGTTCTTGCCGTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
3UTR-3UTR GCA 90 bp GGGTCACTCATGGGTCTCCGGACAGAAGATACTATATCAGAGCTCCTGCTTCGACCCCAAAATCAGAGCTaGACTCAGATCTCAGGTCTT +
Preference number: 2 (lower is better)
Translates to: GSLMGLRTEDTISELLLRPQNQS*TQISGL
Trigger: AAGACCTGAGATCTGAGTGCAGCTCTGATTTTGGGG...TCGAAGCAGGAGCTCTGATATAGTATCTTCTGTCCGGAGACCCATGAGTGACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
3UTR CAA 90 bp CCAGGTGAAGCACAAGAAGAATCCAGTAGACAGGAGAGTATTAATTaGACAGAGGTGAATTCCCCTAGTGCATGGCCGCTACCCACACTG +
Preference number: 2 (lower is better)
Translates to: PGEAQEESSRQESIN*TEVNSPSAWPLPTL
Trigger: CAGTGTGGGTAGCGGCCATGCACTAGGGGAATTCACCTCTGTCAAATTAATACTCTCCTGTCTACTGGATTCTTCTTGTGCTTCACCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
3UTR-3UTR GCA 90 bp AAGCTCTGCCTTAGCATTCATCTGAGTGGAACCACTTTCTACACCCTCAAAGTAAGTAGCACCAATGGCTaGAGCTGGAGGGAGTTCTCG +
Preference number: 2 (lower is better)
Translates to: KLCLSIHLSGTTFYTLKVSSTNG*SWREFS
Trigger: CGAGAACTCCCTCCAGCTGCAGCCATTGGTGCTACT...TACTTTGAGGGTGTAGAAAGTGGTTCCACTCAGATGAATGCTAAGGCAGAGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497580.5
3UTR CAA 90 bp AAACCAGACAGTGATGGCCCATGTACAAGACTTGTGCTTGAAGCTTaGGTGTGCCTCCATGGCCAATTTTTCAGGCACCAAAACCCATTC +
Preference number: 2 (lower is better)
Translates to: KPDSDGPCTRLVLEA*VCLHGQFFRHQNPF
Trigger: GAATGGGTTTTGGTGCCTGAAAAATTGGCCATGGAGGCACACCAAAGCTTCAAGCACAAGTCTTGTACATGGGCCATCACTGTCTGGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
3UTR-3UTR TCA 90 bp ATGCAACTCAGAAAGGAAAGAGCCCAAAGACGAGAGAACCTGCTTGTTAGCTCAAGCCTTCAAAGCAGCTaGTGCACCTTCTCAGAGATC +
Preference number: 2 (lower is better)
Translates to: MQLRKERAQRRENLLVSSSLQSS*CTFSEI
Trigger: GATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCT...TGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGCTCTTTCCTTTCTGAGTTGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
3UTR-3UTR GCA 90 bp TCCTCCGCCAGCTATGGAGTCATGAGCACCCGAACCCATTTCACAGGTGTCACATATTCTAATCCTCAGTaGAACTCATACCTTCTTTCC +
Preference number: 2 (lower is better)
Translates to: SSASYGVMSTRTHFTGVTYSNPQ*NSYLLS
Trigger: GGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATA...TGTGACACCTGTGAAATGGGTTCGGGTGCTCATGACTCCATAGCTGGCGGAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
3UTR-3UTR GCA 90 bp AGTAATCGCAAATACCTCATCACTGTTAATCCACTTACTAAAAATCCTTTGGGCCCCCTGCAACAGCTGTaGTGTGCTCCTCCGCCAGCT +
Preference number: 2 (lower is better)
Translates to: SNRKYLITVNPLTKNPLGPLQQL*CAPPPA
Trigger: AGCTGGCGGAGGAGCACAGCACAGCTGTTGCAGGGG...GCCCAAAGGATTTTTAGTAAGTGGATTAACAGTGATGAGGTATTTGCGATTACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
3UTR-3UTR CCA 90 bp GGCATGGCTGAAACAAAACGTTTTCTCCACCAAGGTCTGTTCCTGTCTGATTTCTGGTGGTGGATGCGATaGCCTAGCATAGTGAACCTT +
Preference number: 2 (lower is better)
Translates to: GMAETKRFLHQGLFLSDFWWWMR*PSIVNL
Trigger: AAGGTTCACTATGCTAGGCCATCGCATCCACCACCA...GAAATCAGACAGGAACAGACCTTGGTGGAGAAAACGTTTTGTTTCAGCCATGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
3UTR-3UTR CCA 90 bp GTCTCCGGACAGAAGATACTATATCAGAGCTCCTGCTTCGAACTAGTCTCTCAGATGGGAACCAAAGTTTaGCAACCTGGCCTCATTTCC +
Preference number: 2 (lower is better)
Translates to: VSGQKILYQSSCFELVSQMGTKV*QPGLIS
Trigger: GGAAATGAGGCCAGGTTGCCAAACTTTGGTTCCCAT...CTGAGAGACTAGTTCGAAGCAGGAGCTCTGATATAGTATCTTCTGTCCGGAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
3UTR-3UTR CCA 90 bp GCCCCCGTATTGGGGCTGAGATTGTTCTCTTGCTCACGCACCTCAGGGACACATGTACTAGTCTCTACTTaGGGACAAGAAAATAGAATA +
Preference number: 2 (lower is better)
Translates to: APVLGLRLFSCSRTSGTHVLVST*GQENRI
Trigger: TATTCTATTTTCTTGTCCCCAAGTAGAGACTAGTAC...ATGTGTCCCTGAGGTGCGTGAGCAAGAGAACAATCTCAGCCCCAATACGGGGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
3UTR-3UTR TCA 90 bp CTGGAGTTAAAACATGGGAACCAAAGTTTGGCAACCTGGCCTCATTTCCTCCCAAGAAGCCCCTTCATGTaGAGACAGTGGATCAAACAT +
Preference number: 2 (lower is better)
Translates to: LELKHGNQSLATWPHFLPRSPFM*RQWIKH
Trigger: ATGTTTGATCCACTGTCTTCACATGAAGGGGCTTCT...TGGGAGGAAATGAGGCCAGGTTGCCAAACTTTGGTTCCCATGTTTTAACTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
3UTR-3UTR TCA 90 bp TCACCTGCTCCAAGATCTTCTCCTGATACCACTACCATTTTGGCTAAGTTAGGTGCCACCACACCAGGCTaGGGGCTACATAGTTTTAAA +
Preference number: 2 (lower is better)
Translates to: SPAPRSSPDTTTILAKLGATTPG*GLHSFK
Trigger: TTTAAAACTATGTAGCCCTCAGCCTGGTGTGGTGGC...ACCTAACTTAGCCAAAATGGTAGTGGTATCAGGAGAAGATCTTGGAGCAGGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394084.5
3UTR-3UTR CCA 90 bp TGGATGCGATGGCCTAGCATAGTGAACCTTTGGCCTTACCACAGCAGAAGCCCCTATTTCATCCATGTCTaGACTAGTGACAGAATCTTT +
Preference number: 2 (lower is better)
Translates to: WMRWPSIVNLWPYHSRSPYFIHV*TSDRIF
Trigger: AAAGATTCTGTCACTAGTCCAGACATGGATGAAATA...GGGGCTTCTGCTGTGGTAAGGCCAAAGGTTCACTATGCTAGGCCATCGCATCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
3UTR-3UTR CCA 90 bp TTTCTAAAGCTCTGCCTTAGCATTCATCTGAGTGGAACCACTTTCTACACCCTCTGGTGGTGGATGCGATaGCCTAGCATAGTGAACCTT +
Preference number: 2 (lower is better)
Translates to: FLKLCLSIHLSGTTFYTLWWWMR*PSIVNL
Trigger: AAGGTTCACTATGCTAGGCCATCGCATCCACCACCA...GAGGGTGTAGAAAGTGGTTCCACTCAGATGAATGCTAAGGCAGAGCTTTAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497580.5
3UTR-3UTR CCA 90 bp ACACACGAAGTGAAACCAGACAGTGATGGCCCATGTACAAGACTTGTGCTTGAATTTGGTGTGCCTCCATaGCCAATTTTTCAGGCACCA +
Preference number: 2 (lower is better)
Translates to: THEVKPDSDGPCTRLVLEFGVPP*PIFQAP
Trigger: TGGTGCCTGAAAAATTGGCCATGGAGGCACACCAAA...TTCAAGCACAAGTCTTGTACATGGGCCATCACTGTCTGGTTTCACTTCGTGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
3UTR-3UTR TCA 90 bp AGTAATCGCAAATACCTCATCACTGTTAATCCACTTACTAAAAATCCTTTGGGCGGCAGGGGAATCACTTaGACTGGGAGGTGGAGGTTG +
Preference number: 2 (lower is better)
Translates to: SNRKYLITVNPLTKNPLGGRGIT*TGRWRL
Trigger: CAACCTCCACCTCCCAGTTCAAGTGATTCCCCTGCC...GCCCAAAGGATTTTTAGTAAGTGGATTAACAGTGATGAGGTATTTGCGATTACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
3UTR-3UTR TCA 90 bp TGCTTAACATTTACTGAATCAAAGGCTGAAGTAAATGGACTCTCATCTAGGTCTGGCAGGGGAATCACTTaGACTGGGAGGTGGAGGTTG +
Preference number: 2 (lower is better)
Translates to: CLTFTESKAEVNGLSSRSGRGIT*TGRWRL
Trigger: CAACCTCCACCTCCCAGTTCAAGTGATTCCCCTGCC...AGACCTAGATGAGAGTCCATTTACTTCAGCCTTTGATTCAGTAAATGTTAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
3UTR-3UTR GCA 90 bp ACCAAGGTCTGTTCCTGTCTGATTTCTCATCATCGCTATCTTTGCGTTCTTCAGCCCCAAAATCAGAGCTaGACTCAGATCTCAGGTCTT +
Preference number: 2 (lower is better)
Translates to: TKVCSCLISHHRYLCVLQPQNQS*TQISGL
Trigger: AAGACCTGAGATCTGAGTGCAGCTCTGATTTTGGGG...CTGAAGAACGCAAAGATAGCGATGATGAGAAATCAGACAGGAACAGACCTTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
3UTR-3UTR CCA 90 bp CACCAAGGTCTGTTCCTGTCTGATTTCTCATCATCGCTATCTTTGCGTTCTTCAACAGTGGATCAAACATaGCCAGCAGAGACTCTGACT +
Preference number: 2 (lower is better)
Translates to: HQGLFLSDFSSSLSLRSSTVDQT*PAETLT
Trigger: AGTCAGAGTCTCTGCTGGCCATGTTTGATCCACTGT...TGAAGAACGCAAAGATAGCGATGATGAGAAATCAGACAGGAACAGACCTTGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
3UTR-3UTR CCA 90 bp TCATGGGTCTCCGGACAGAAGATACTATATCAGAGCTCCTGCTTCGAACTAGTCGCTGGAGTTAAAACATaGGAACCAAAGTTTGGCAAC +
Preference number: 2 (lower is better)
Translates to: SWVSGQKILYQSSCFELVAGVKT*EPKFGN
Trigger: GTTGCCAAACTTTGGTTCCCATGTTTTAACTCCAGC...GACTAGTTCGAAGCAGGAGCTCTGATATAGTATCTTCTGTCCGGAGACCCATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
3UTR CAA 90 bp CTCAAAGTAGCTAGAAACTTAAGCCCAGCAAGTCTTACAGAGGAGTaGAGACATTGGCTCTCTGAAAGAGATTCTGGGGCTTTGCTTCTT +
Preference number: 2 (lower is better)
Translates to: LKVARNLSPASLTEE*RHWLSERDSGALLL
Trigger: AAGAAGCAAAGCCCCAGAATCTCTTTCAGAGAGCCAATGTCTCAACTCCTCTGTAAGACTTGCTGGGCTTAAGTTTCTAGCTACTTTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497580.5
3UTR-3UTR TCA 90 bp CAAGGTCTGTTCCTGTCTGATTTCTCATCATCGCTATCTTTGCGTTCTTCAGTCAAGAATGCCTTTGCTTaGATGCCTCCATTTCAGCTG +
Preference number: 2 (lower is better)
Translates to: QGLFLSDFSSSLSLRSSVKNAFA*MPPFQL
Trigger: CAGCTGAAATGGAGGCATTCAAGCAAAGGCATTCTT...GACTGAAGAACGCAAAGATAGCGATGATGAGAAATCAGACAGGAACAGACCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
3UTR-3UTR TCA 90 bp GGAGCTCTGTCTGGGATTTCTGCAGTATATTATTTCGGAGGAGAAGAACCACCAAGAGATCTGTTTGTCTaGTTAACAGTCTGCTGCCTT +
Preference number: 2 (lower is better)
Translates to: GALSGISAVYYFGGEEPPRDLFV*LTVCCL
Trigger: AAGGCAGCAGACTGTTAATCAGACAAACAGATCTCT...TGGTGGTTCTTCTCCTCCGAAATAATATACTGCAGAAATCCCAGACAGAGCTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
3UTR-3UTR TCA 90 bp ATGCAACTCAGAAAGGAAAGAGCCCAAAGACGAGAGAACCTGCTTGTTAGCTCAAGAGATCTGTTTGTCTaGTTAACAGTCTGCTGCCTT +
Preference number: 2 (lower is better)
Translates to: MQLRKERAQRRENLLVSSRDLFV*LTVCCL
Trigger: AAGGCAGCAGACTGTTAATCAGACAAACAGATCTCT...TGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGCTCTTTCCTTTCTGAGTTGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
3UTR-3UTR TCA 90 bp TGCTTAACATTTACTGAATCAAAGGCTGAAGTAAATGGACTCTCATCTAGGTCTAGGTGGAGGTTGCAGTaGGCCAAGATCGCACCATTG +
Preference number: 2 (lower is better)
Translates to: CLTFTESKAEVNGLSSRSRWRLQ*AKIAPL
Trigger: CAATGGTGCGATCTTGGCTCACTGCAACCTCCACCT...AGACCTAGATGAGAGTCCATTTACTTCAGCCTTTGATTCAGTAAATGTTAAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
3UTR-3UTR TCA 90 bp AGTAATCGCAAATACCTCATCACTGTTAATCCACTTACTAAAAATCCTTTGGGCCCCCCGTATTGGGGCTaGGATTGTTCTCTTGCTCAC +
Preference number: 2 (lower is better)
Translates to: SNRKYLITVNPLTKNPLGPPYWG*DCSLAH
Trigger: GTGAGCAAGAGAACAATCTCAGCCCCAATACGGGGG...GCCCAAAGGATTTTTAGTAAGTGGATTAACAGTGATGAGGTATTTGCGATTACT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
3UTR-3UTR GCA 90 bp AGTAATCGCAAATACCTCATCACTGTTAATCCACTTACTAAAAATCCTTTGGGCCACAGCCCTATCTCCTaGCTCCAGTGTAGCCCTTCA +
Preference number: 2 (lower is better)
Translates to: SNRKYLITVNPLTKNPLGHSPIS*LQCSPS
Trigger: TGAAGGGCTACACTGGAGGCAGGAGATAGGGCTGTG...GCCCAAAGGATTTTTAGTAAGTGGATTAACAGTGATGAGGTATTTGCGATTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
3UTR-3UTR CCA 90 bp TTAAAACATGGGAACCAAAGTTTGGCAACCTGGCCTCATTTCCTCCCACAGCTCGGTCTTCAATCTTATTaGGAATATCCTCAGAGGTTG +
Preference number: 2 (lower is better)
Translates to: LKHGNQSLATWPHFLPQLGLQSY*EYPQRL
Trigger: CAACCTCTGAGGATATTCCCAATAAGATTGAAGACC...GAGCTGTGGGAGGAAATGAGGCCAGGTTGCCAAACTTTGGTTCCCATGTTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
3UTR-3UTR CCA 90 bp AAGGTCTGTTCCTGTCTGATTTCTCATCATCGCTATCTTTGCGTTCTTCAGTCTAGCATAGTGAACCTTTaGCCTTACCACAGCAGAAGC +
Preference number: 2 (lower is better)
Translates to: KVCSCLISHHRYLCVLQSSIVNL*PYHSRS
Trigger: GCTTCTGCTGTGGTAAGGCCAAAGGTTCACTATGCT...AGACTGAAGAACGCAAAGATAGCGATGATGAGAAATCAGACAGGAACAGACCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
3UTR-3UTR TCA 90 bp TGCTTAACATTTACTGAATCAAAGGCTGAAGTAAATGGACTCTCATCTAGGTCTACGAGGTCAGGAGATTaGGGATCATCCTGGCCAACA +
Preference number: 2 (lower is better)
Translates to: CLTFTESKAEVNGLSSRSTRSGD*GSSWPT
Trigger: TGTTGGCCAGGATGATCCTCAATCTCCTGACCTCGT...AGACCTAGATGAGAGTCCATTTACTTCAGCCTTTGATTCAGTAAATGTTAAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
3UTR-3UTR GCA 90 bp GGAGCTCTGTCTGGGATTTCTGCAGTATATTATTTCGGAGGAGAAGAACCACCAAGATCTGCTTTAAAATaGCTGATGCTGTGCAGTATC +
Preference number: 2 (lower is better)
Translates to: GALSGISAVYYFGGEEPPRSALK*LMLCSI
Trigger: GATACTGCACAGCATCAGGCATTTTAAAGCAGATCT...TGGTGGTTCTTCTCCTCCGAAATAATATACTGCAGAAATCCCAGACAGAGCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
3UTR-3UTR CCA 90 bp CACCAAGGTCTGTTCCTGTCTGATTTCTCATCATCGCTATCTTTGCGTTCTTCAGCTGGAGTTAAAACATaGGAACCAAAGTTTGGCAAC +
Preference number: 2 (lower is better)
Translates to: HQGLFLSDFSSSLSLRSSAGVKT*EPKFGN
Trigger: GTTGCCAAACTTTGGTTCCCATGTTTTAACTCCAGC...TGAAGAACGCAAAGATAGCGATGATGAGAAATCAGACAGGAACAGACCTTGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
3UTR-3UTR CCA 90 bp ACACACGAAGTGAAACCAGACAGTGATGGCCCATGTACAAGACTTGTGCTTGAAGTAAGGAGCTCTGTCTaGGATTTCTGCAGTATATTA +
Preference number: 2 (lower is better)
Translates to: THEVKPDSDGPCTRLVLEVRSSV*DFCSIL
Trigger: TAATATACTGCAGAAATCCCAGACAGAGCTCCTTAC...TTCAAGCACAAGTCTTGTACATGGGCCATCACTGTCTGGTTTCACTTCGTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
3UTR-3UTR GCA 90 bp GGAGCTCTGTCTGGGATTTCTGCAGTATATTATTTCGGAGGAGAAGAACCACCATATTCTAATCCTCAGTaGAACTCATACCTTCTTTCC +
Preference number: 2 (lower is better)
Translates to: GALSGISAVYYFGGEEPPYSNPQ*NSYLLS
Trigger: GGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATA...TGGTGGTTCTTCTCCTCCGAAATAATATACTGCAGAAATCCCAGACAGAGCTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
3UTR-3UTR CCA 90 bp TGCTTAACATTTACTGAATCAAAGGCTGAAGTAAATGGACTCTCATCTAGGTCTAATCTAGTTTCTGGCTaGGCAGGGTGGTTCACGCTT +
Preference number: 2 (lower is better)
Translates to: CLTFTESKAEVNGLSSRSNLVSG*AGWFTL
Trigger: AAGCGTGAACCACCCTGCCCAGCCAGAAACTAGATT...AGACCTAGATGAGAGTCCATTTACTTCAGCCTTTGATTCAGTAAATGTTAAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
3UTR-3UTR TCA 90 bp TATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCATTAATGAGCCTTCAAAGCAGCTaGTGCACCTTCTCAGAGATC +
Preference number: 2 (lower is better)
Translates to: YSNPQCNSYLLSIRCSLMSLQSS*CTFSEI
Trigger: GATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCT...CATTAATGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
3UTR-3UTR TCA 90 bp TGCTTAACATTTACTGAATCAAAGGCTGAAGTAAATGGACTCTCATCTAGGTCTGACAGTTACAGCCAATaGAGTGCACGACTCTGTACA +
Preference number: 2 (lower is better)
Translates to: CLTFTESKAEVNGLSSRSDSYSQ*SARLCT
Trigger: TGTACAGAGTCGTGCACTTCATTGGCTGTAACTGTC...AGACCTAGATGAGAGTCCATTTACTTCAGCCTTTGATTCAGTAAATGTTAAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
3UTR-3UTR GCA 90 bp ACAATAGTGACAGGCATGACTTCCATTTATGAAACCACTATCACTTCCTGCAAAATGCCTTTGCTTGAATaGCTCCATTTCAGCTGGAGT +
Preference number: 2 (lower is better)
Translates to: TIVTGMTSIYETTITSCKMPLLE*LHFSWS
Trigger: ACTCCAGCTGAAATGGAGGCATTCAAGCAAAGGCAT...TTTGCAGGAAGTGATAGTGGTTTCATAAATGGAAGTCATGCCTGTCACTATTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497580.5
3UTR-3UTR TCA 90 bp GTAGTACTAGTCTCTACTTGGGGACAAGAAAATAGAATATGCAACTCAGAAAGGAGAGATCTGTTTGTCTaGTTAACAGTCTGCTGCCTT +
Preference number: 2 (lower is better)
Translates to: VVLVSTWGQENRICNSERRDLFV*LTVCCL
Trigger: AAGGCAGCAGACTGTTAATCAGACAAACAGATCTCT...CCTTTCTGAGTTGCATATTCTATTTTCTTGTCCCCAAGTAGAGACTAGTACTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
3UTR-3UTR TCA 90 bp AGTAATCGCAAATACCTCATCACTGTTAATCCACTTACTAAAAATCCTTTGGGCGGTGAGATGTCTAAGTaGCTTAGTGACCTTCACACT +
Preference number: 2 (lower is better)
Translates to: SNRKYLITVNPLTKNPLGGEMSK*LSDLHT
Trigger: AGTGTGAAGGTCACTAAGTCACTTAGACATCTCACC...GCCCAAAGGATTTTTAGTAAGTGGATTAACAGTGATGAGGTATTTGCGATTACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
3UTR-3UTR TCA 90 bp AGTAATCGCAAATACCTCATCACTGTTAATCCACTTACTAAAAATCCTTTGGGCAGTAGTCCTTGCTCCTaGCAGATTTTCAGAGGAAAC +
Preference number: 2 (lower is better)
Translates to: SNRKYLITVNPLTKNPLGSSPCS*QIFRGN
Trigger: GTTTCCTCTGAAAATCTGTCAGGAGCAAGGACTACT...GCCCAAAGGATTTTTAGTAAGTGGATTAACAGTGATGAGGTATTTGCGATTACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
3UTR-3UTR TCA 90 bp AGTAATCGCAAATACCTCATCACTGTTAATCCACTTACTAAAAATCCTTTGGGCCACCAATTGAGGAAGTaGACCCCACTACACTTCTAT +
Preference number: 2 (lower is better)
Translates to: SNRKYLITVNPLTKNPLGHQLRK*TPLHFY
Trigger: ATAGAAGTGTAGTGGGGTTCACTTCCTCAATTGGTG...GCCCAAAGGATTTTTAGTAAGTGGATTAACAGTGATGAGGTATTTGCGATTACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
3UTR-3UTR GCA 90 bp ATGTCATGTATGGTAATCAGTCTATCTCCTAATGCAGGCTCACAAACTTCCACGTATTCTAATCCTCAGTaGAACTCATACCTTCTTTCC +
Preference number: 2 (lower is better)
Translates to: MSCMVISLSPNAGSQTSTYSNPQ*NSYLLS
Trigger: GGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATA...CGTGGAAGTTTGTGAGCCTGCATTAGGAGATAGACTGATTACCATACATGACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
3UTR-3UTR GCA 90 bp TGCTTAACATTTACTGAATCAAAGGCTGAAGTAAATGGACTCTCATCTAGGTCTCTTGAAGCTTTGGTGTaGCTCCATGGCCAATTTTTC +
Preference number: 2 (lower is better)
Translates to: CLTFTESKAEVNGLSSRSLEALV*LHGQFF
Trigger: GAAAAATTGGCCATGGAGGCACACCAAAGCTTCAAG...AGACCTAGATGAGAGTCCATTTACTTCAGCCTTTGATTCAGTAAATGTTAAGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
3UTR-3UTR GCA 90 bp AGTAATCGCAAATACCTCATCACTGTTAATCCACTTACTAAAAATCCTTTGGGCCATGTACAAGACTTGTaGTTGAAGCTTTGGTGTGCC +
Preference number: 2 (lower is better)
Translates to: SNRKYLITVNPLTKNPLGHVQDL*LKLWCA
Trigger: GGCACACCAAAGCTTCAAGCACAAGTCTTGTACATG...GCCCAAAGGATTTTTAGTAAGTGGATTAACAGTGATGAGGTATTTGCGATTACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
3UTR-3UTR GCA 90 bp GCCCAAAGACGAGAGAACCTGCTTGTTAGCTCATTAACCTGTTTAGTAAAGATCAAATGCCTGATGCTGTaGAGTATCATACAAAACAAT +
Preference number: 2 (lower is better)
Translates to: AQRRENLLVSSLTCLVKIKCLML*SIIQNN
Trigger: ATTGTTTTGTATGATACTGCACAGCATCAGGCATTT...GATCTTTACTAAACAGGTTAATGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
3UTR-3UTR GCA 90 bp GTAGTACTAGTCTCTACTTGGGGACAAGAAAATAGAATATGCAACTCAGAAAGGAGATCTGCTTTAAAATaGCTGATGCTGTGCAGTATC +
Preference number: 2 (lower is better)
Translates to: VVLVSTWGQENRICNSERRSALK*LMLCSI
Trigger: GATACTGCACAGCATCAGGCATTTTAAAGCAGATCT...CCTTTCTGAGTTGCATATTCTATTTTCTTGTCCCCAAGTAGAGACTAGTACTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
3UTR-3UTR GCA 90 bp AGTAATCGCAAATACCTCATCACTGTTAATCCACTTACTAAAAATCCTTTGGGCAGAAAAGAGCCCCGATaGAATGTCCACATCTTCATA +
Preference number: 2 (lower is better)
Translates to: SNRKYLITVNPLTKNPLGRKEPR*NVHIFI
Trigger: TATGAAGATGTGGACATTGCATCGGGGCTCTTTTCT...GCCCAAAGGATTTTTAGTAAGTGGATTAACAGTGATGAGGTATTTGCGATTACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
3UTR-3UTR GCA 90 bp AGTAATCGCAAATACCTCATCACTGTTAATCCACTTACTAAAAATCCTTTGGGCACCATGCAGCACATTTaGAATCCCTTAGAAAACCTG +
Preference number: 2 (lower is better)
Translates to: SNRKYLITVNPLTKNPLGTMQHI*NPLENL
Trigger: CAGGTTTTCTAAGGGATTGCAAATGTGCTGCATGGT...GCCCAAAGGATTTTTAGTAAGTGGATTAACAGTGATGAGGTATTTGCGATTACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
3UTR-3UTR CCA 90 bp AGTAATCGCAAATACCTCATCACTGTTAATCCACTTACTAAAAATCCTTTGGGCAAGGGAATCCAAGAATaGAGGTCTAGACATTTCCTA +
Preference number: 2 (lower is better)
Translates to: SNRKYLITVNPLTKNPLGKGIQE*RSRHFL
Trigger: TAGGAAATGTCTAGACCTCCATTCTTGGATTCCCTT...GCCCAAAGGATTTTTAGTAAGTGGATTAACAGTGATGAGGTATTTGCGATTACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
3UTR-3UTR CCA 90 bp AGTAATCGCAAATACCTCATCACTGTTAATCCACTTACTAAAAATCCTTTGGGCGTAAGGAGCTCTGTCTaGGATTTCTGCAGTATATTA +
Preference number: 2 (lower is better)
Translates to: SNRKYLITVNPLTKNPLGVRSSV*DFCSIL
Trigger: TAATATACTGCAGAAATCCCAGACAGAGCTCCTTAC...GCCCAAAGGATTTTTAGTAAGTGGATTAACAGTGATGAGGTATTTGCGATTACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
3UTR-3UTR CCA 90 bp AGTAATCGCAAATACCTCATCACTGTTAATCCACTTACTAAAAATCCTTTGGGCAAAATTAGCTGGGTGTaGTGGCATACACTTGTAATC +
Preference number: 2 (lower is better)
Translates to: SNRKYLITVNPLTKNPLGKISWV*WHTLVI
Trigger: GATTACAAGTGTATGCCACCACACCCAGCTAATTTT...GCCCAAAGGATTTTTAGTAAGTGGATTAACAGTGATGAGGTATTTGCGATTACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
3UTR-3UTR GCA 90 bp GTAGTACTAGTCTCTACTTGGGGACAAGAAAATAGAATATGCAACTCAGAAAGGAAATGCCTGATGCTGTaGAGTATCATACAAAACAAT +
Preference number: 2 (lower is better)
Translates to: VVLVSTWGQENRICNSERKCLML*SIIQNN
Trigger: ATTGTTTTGTATGATACTGCACAGCATCAGGCATTT...CCTTTCTGAGTTGCATATTCTATTTTCTTGTCCCCAAGTAGAGACTAGTACTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
3UTR-3UTR GCA 90 bp TGCTTAACATTTACTGAATCAAAGGCTGAAGTAAATGGACTCTCATCTAGGTCTAAATGCCTGATGCTGTaGAGTATCATACAAAACAAT +
Preference number: 2 (lower is better)
Translates to: CLTFTESKAEVNGLSSRSKCLML*SIIQNN
Trigger: ATTGTTTTGTATGATACTGCACAGCATCAGGCATTT...AGACCTAGATGAGAGTCCATTTACTTCAGCCTTTGATTCAGTAAATGTTAAGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
3UTR-3UTR CCA 90 bp TGCTTAACATTTACTGAATCAAAGGCTGAAGTAAATGGACTCTCATCTAGGTCTGTACTAGTCTCTACTTaGGGACAAGAAAATAGAATA +
Preference number: 2 (lower is better)
Translates to: CLTFTESKAEVNGLSSRSVLVST*GQENRI
Trigger: TATTCTATTTTCTTGTCCCCAAGTAGAGACTAGTAC...AGACCTAGATGAGAGTCCATTTACTTCAGCCTTTGATTCAGTAAATGTTAAGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
3UTR-3UTR CCA 90 bp TATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCATTAATGGTACTAGTCTCTACTTaGGGACAAGAAAATAGAATA +
Preference number: 2 (lower is better)
Translates to: YSNPQCNSYLLSIRCSLMVLVST*GQENRI
Trigger: TATTCTATTTTCTTGTCCCCAAGTAGAGACTAGTAC...CATTAATGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
3UTR CCA 72 bp GGCTGCAGCTGGAGGGAGTTCTCGCTCTTCATTTCCTaGACGCCGGTTCCAGCTGGGGTCACTCATGGGTCT +
Preference number: 3 (lower is better)
Translates to: GCSWREFSLFIS*TPVPAGVTHGS
Trigger: AGACCCATGAGTGACCCCAGCTGGAACCGGCGTCCAGGAAATGAAGAGCGAGAACTCCCTCCAGCTGCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
3UTR GCA 72 bp GAGGAAACCTTAGCTGCCCCTGCAACAGCTGTGCTGTaGTCCTCCGCCAGCTATGGAGTCATGAGCACCCGA +
Preference number: 3 (lower is better)
Translates to: EETLAAPATAVL*SSASYGVMSTR
Trigger: TCGGGTGCTCATGACTCCATAGCTGGCGGAGGAGCACAGCACAGCTGTTGCAGGGGCAGCTAAGGTTTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
3UTR TCA 72 bp CAGCTGTGCTGTGCTCCTCCGCCAGCTATGGAGTCATaGGCACCCGAACCCATTTCACAGGTGTCACAGATG +
Preference number: 3 (lower is better)
Translates to: QLCCAPPPAMES*APEPISQVSQM
Trigger: CATCTGTGACACCTGTGAAATGGGTTCGGGTGCTCATGACTCCATAGCTGGCGGAGGAGCACAGCACAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
3UTR TCA 72 bp AGTGGAGACGTCATCTCTCTTGAATTGAACCCTTGCTaGGCTCAGGCCTGTGGGATGCGGCAGCTCCAGGGT +
Preference number: 3 (lower is better)
Translates to: SGDVISLELNPC*AQACGMRQLQG
Trigger: ACCCTGGAGCTGCCGCATCCCACAGGCCTGAGCTCAGCAAGGGTTCAATTCAAGAGAGATGACGTCTCCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
3UTR CCA 72 bp TCCCACAGCTCCTTCCAGGATTGGGGGATCTGGTGGTaGATGCGATGGCCTAGCATAGTGAACCTTTGGCCT +
Preference number: 3 (lower is better)
Translates to: SHSSFQDWGIWW*MRWPSIVNLWP
Trigger: AGGCCAAAGGTTCACTATGCTAGGCCATCGCATCCACCACCAGATCCCCCAATCCTGGAAGGAGCTGTGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
3UTR CCA 72 bp TCCTCCCACAGCTCCTTCCAGGATTGGGGGATCTGGTaGTGGATGCGATGGCCTAGCATAGTGAACCTTTGG +
Preference number: 3 (lower is better)
Translates to: SSHSSFQDWGIW*WMRWPSIVNLW
Trigger: CCAAAGGTTCACTATGCTAGGCCATCGCATCCACCACCAGATCCCCCAATCCTGGAAGGAGCTGTGGGAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
3UTR CCA 72 bp CATTTCCTGGACGCCGGTTCCAGCTGGGGTCACTCATaGGTCTCCGGACAGAAGATACTATATCAGAGCTCC +
Preference number: 3 (lower is better)
Translates to: HFLDAGSSWGHS*VSGQKILYQSS
Trigger: GGAGCTCTGATATAGTATCTTCTGTCCGGAGACCCATGAGTGACCCCAGCTGGAACCGGCGTCCAGGAAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
3UTR CCA 72 bp GTTCTCGCTCTTCATTTCCTGGACGCCGGTTCCAGCTaGGGTCACTCATGGGTCTCCGGACAGAAGATACTA +
Preference number: 3 (lower is better)
Translates to: VLALHFLDAGSS*GHSWVSGQKIL
Trigger: TAGTATCTTCTGTCCGGAGACCCATGAGTGACCCCAGCTGGAACCGGCGTCCAGGAAATGAAGAGCGAGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
3UTR-3UTR CAA 90 bp AGTTCTCGCTCTTCATTTCCTGGACGCCGGTTCCAGCTGGGGTCACTCATGGGTCATGGGAACCAAAGTTaGGCAACCTGGCCTCATTTC +
Preference number: 3 (lower is better)
Translates to: SSRSSFPGRRFQLGSLMGHGNQS*ATWPHF
Trigger: GAAATGAGGCCAGGTTGCCAAACTTTGGTTCCCATG...ACCCATGAGTGACCCCAGCTGGAACCGGCGTCCAGGAAATGAAGAGCGAGAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
3UTR TCA 72 bp ATTCTTACGGCAAGAACACAGCCCCCGTATTGGGGCTaGGATTGTTCTCTTGCTCACGCACCTCAGGGACAC +
Preference number: 3 (lower is better)
Translates to: ILTARTQPPYWG*DCSLAHAPQGH
Trigger: GTGTCCCTGAGGTGCGTGAGCAAGAGAACAATCTCAGCCCCAATACGGGGGCTGTGTTCTTGCCGTAAGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
3UTR GCA 72 bp ATGAGGTGCAGCCACCAAAGAAGTAGCACCAATGGCTaGAGCTGGAGGGAGTTCTCGCTCTTCATTTCCTGG +
Preference number: 3 (lower is better)
Translates to: MRCSHQRSSTNG*SWREFSLFISW
Trigger: CCAGGAAATGAAGAGCGAGAACTCCCTCCAGCTGCAGCCATTGGTGCTACTTCTTTGGTGGCTGCACCTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
3UTR TCA 72 bp GTGGCATACACTTGTAATCTGAGCAACCAGGGAGGCTaGGCCATGAGAATCACTAGAGACTGGGAGATGGTG +
Preference number: 3 (lower is better)
Translates to: VAYTCNLSNQGG*AMRITRDWEMV
Trigger: CACCATCTCCCAGTCTCTAGTGATTCTCATGGCTCAGCCTCCCTGGTTGCTCAGATTACAAGTGTATGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
3UTR TCA 72 bp CTTGAGGAGTCCTTACTCGGGGATGAAGATGATGAATaGGGTGCAGCCACCAAAGAAGTAGCACCAATGGCT +
Preference number: 3 (lower is better)
Translates to: LEESLLGDEDDE*GAATKEVAPMA
Trigger: AGCCATTGGTGCTACTTCTTTGGTGGCTGCACCTCATTCATCATCTTCATCCCCGAGTAAGGACTCCTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
3UTR TCA 72 bp AAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCTaGTTAACAGTCTGCTGCCTTGGTGGGCCTTGGTCT +
Preference number: 3 (lower is better)
Translates to: KQLMHLLRDLFV*LTVCCLGGPWS
Trigger: AGACCAAGGCCCACCAAGGCAGCAGACTGTTAATCAGACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
3UTR TCA 72 bp TGTCTGCCATTATCCAAGTGGAGACGTCATCTCTCTTaGATTGAACCCTTGCTGAGCTCAGGCCTGTGGGAT +
Preference number: 3 (lower is better)
Translates to: CLPLSKWRRHLS*IEPLLSSGLWD
Trigger: ATCCCACAGGCCTGAGCTCAGCAAGGGTTCAATTCAAGAGAGATGACGTCTCCACTTGGATAATGGCAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
3UTR GCA 72 bp GGCCCATGTACAAGACTTGTGCTTGAAGCTTTGGTGTaGCTCCATGGCCAATTTTTCAGGCACCAAAACCCA +
Preference number: 3 (lower is better)
Translates to: GPCTRLVLEALV*LHGQFFRHQNP
Trigger: TGGGTTTTGGTGCCTGAAAAATTGGCCATGGAGGCACACCAAAGCTTCAAGCACAAGTCTTGTACATGGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
3UTR GCA 72 bp CTGCCCGAGGCTGTTTGTCACAGTTCCCTTAAAAGATaGCTGGAAATGCTCCCAACAACAAGGGACTCAAGT +
Preference number: 3 (lower is better)
Translates to: LPEAVCHSSLKR*LEMLPTTRDSS
Trigger: ACTTGAGTCCCTTGTTGTTGGGAGCATTTCCAGGCATCTTTTAAGGGAACTGTGACAAACAGCCTCGGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
3UTR GCA 72 bp GGTCTTTGTATCCAGTGTCTATCACAGTGCCTCATGTaGAAGACACATCCACTCTCACAGGACTTCTGTGGG +
Preference number: 3 (lower is better)
Translates to: GLCIQCLSQCLM*KTHPLSQDFCG
Trigger: CCCACAGAAGTCCTGTGAGAGTGGATGTGTCTTGCACATGAGGCACTGTGATAGACACTGGATACAAAGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394084.5
3UTR-3UTR CAA 90 bp TGGATGCGATGGCCTAGCATAGTGAACCTTTGGCCTTACCACAGCAGAAGCCCCAGGTCTTCAATCTTATaGGGAATATCCTCAGAGGTT +
Preference number: 3 (lower is better)
Translates to: WMRWPSIVNLWPYHSRSPRSSIL*GISSEV
Trigger: AACCTCTGAGGATATTCCCAATAAGATTGAAGACCT...GGGGCTTCTGCTGTGGTAAGGCCAAAGGTTCACTATGCTAGGCCATCGCATCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
3UTR GCA 72 bp GGTCCTAATGGTCTTTGTATCCAGTGTCTATCACAGTaGCTCATGTGCAAGACACATCCACTCTCACAGGAC +
Preference number: 3 (lower is better)
Translates to: GPNGLCIQCLSQ*LMCKTHPLSQD
Trigger: GTCCTGTGAGAGTGGATGTGTCTTGCACATGAGGCACTGTGATAGACACTGGATACAAAGACCATTAGGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394084.5
3UTR GCA 72 bp TGGGTCTCCGGACAGAAGATACTATATCAGAGCTCCTaGTTCGAACTAGTCTCTCAGGGTAAGAATGCCTTT +
Preference number: 3 (lower is better)
Translates to: WVSGQKILYQSS*FELVSQGKNAF
Trigger: AAAGGCATTCTTACCCTGAGAGACTAGTTCGAAGCAGGAGCTCTGATATAGTATCTTCTGTCCGGAGACCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
3UTR CCA 72 bp AGTATTAATTTGACAGAGGTGAATTCCCCTAGTGCATaGCCGCTACCCACACTGTCTGCCATTATCCAAGTG +
Preference number: 3 (lower is better)
Translates to: SINLTEVNSPSA*PLPTLSAIIQV
Trigger: CACTTGGATAATGGCAGACAGTGTGGGTAGCGGCCATGCACTAGGGGAATTCACCTCTGTCAAATTAATACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
3UTR CCA 72 bp TGCTTGAATGCCTCCATTTCAGCTGGAGTTAAAACATaGGAACCAAAGTTTGGCAACCTGGCCTCATTTCCT +
Preference number: 3 (lower is better)
Translates to: CLNASISAGVKT*EPKFGNLASFP
Trigger: AGGAAATGAGGCCAGGTTGCCAAACTTTGGTTCCCATGTTTTAACTCCAGCTGAAATGGAGGCATTCAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
3UTR CCA 72 bp TTAAGCCCAGCAAGTCTTACAGAGGAGTTGAGACATTaGCTCTCTGAAAGAGATTCTGGGGCTTTGCTTCTT +
Preference number: 3 (lower is better)
Translates to: LSPASLTEELRH*LSERDSGALLL
Trigger: AAGAAGCAAAGCCCCAGAATCTCTTTCAGAGAGCCAATGTCTCAACTCCTCTGTAAGACTTGCTGGGCTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497580.5
3UTR-3UTR CAA 90 bp TCATGGGTCTCCGGACAGAAGATACTATATCAGAGCTCCTGCTTCGAACTAGTCAGGTCTTCAATCTTATaGGGAATATCCTCAGAGGTT +
Preference number: 3 (lower is better)
Translates to: SWVSGQKILYQSSCFELVRSSIL*GISSEV
Trigger: AACCTCTGAGGATATTCCCAATAAGATTGAAGACCT...GACTAGTTCGAAGCAGGAGCTCTGATATAGTATCTTCTGTCCGGAGACCCATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
3UTR-3UTR CAA 90 bp CACCAAGGTCTGTTCCTGTCTGATTTCTCATCATCGCTATCTTTGCGTTCTTCAAGGGTAAGAATGCCTTaGCTTGAATGCCTCCATTTC +
Preference number: 3 (lower is better)
Translates to: HQGLFLSDFSSSLSLRSSRVRMP*LECLHF
Trigger: GAAATGGAGGCATTCAAGCAAAGGCATTCTTACCCT...TGAAGAACGCAAAGATAGCGATGATGAGAAATCAGACAGGAACAGACCTTGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
3UTR-3UTR CAA 90 bp GCTTTGGTGTGCCTCCATGGCCAATTTTTCAGGCACCAAAACCCATTCCTGATTACATTCACTGAATTCTaGGTCTGTGCATTCAATGTG +
Preference number: 3 (lower is better)
Translates to: ALVCLHGQFFRHQNPFLITFTEF*VCAFNV
Trigger: CACATTGAATGCACAGACCAAGAATTCAGTGAATGT...AATCAGGAATGGGTTTTGGTGCCTGAAAAATTGGCCATGGAGGCACACCAAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
3UTR TCA 72 bp TTCGAACTAGTCTCTCAGGGTAAGAATGCCTTTGCTTaGATGCCTCCATTTCAGCTGGAGTTAAAACATGGG +
Preference number: 3 (lower is better)
Translates to: FELVSQGKNAFA*MPPFQLELKHG
Trigger: CCCATGTTTTAACTCCAGCTGAAATGGAGGCATTCAAGCAAAGGCATTCTTACCCTGAGAGACTAGTTCGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
3UTR GCA 72 bp CCAGGACATAGGAATAGAAAAACCATGCAGCACATTTaGAATCCCTTAGAAAACCTGAGCCTCCTACTACAG +
Preference number: 3 (lower is better)
Translates to: PGHRNRKTMQHI*NPLENLSLLLQ
Trigger: CTGTAGTAGGAGGCTCAGGTTTTCTAAGGGATTGCAAATGTGCTGCATGGTTTTTCTATTCCTATGTCCTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
3UTR CCA 72 bp AATGGACTCTCATCTAGGTCTCAGAAATCACACAGCTaGCCTCGTGATGTATTTACGATGGGATTTAACTTC +
Preference number: 3 (lower is better)
Translates to: NGLSSRSQKSHS*PRDVFTMGFNF
Trigger: GAAGTTAAATCCCATCGTAAATACATCACGAGGCCAGCTGTGTGATTTCTGAGACCTAGATGAGAGTCCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
3UTR TCA 72 bp AAAAAGCAGCTAAATGTGTTTAGGAAACACACGAAGTaGAACCAGACAGTGATGGCCCATGTACAAGACTTG +
Preference number: 3 (lower is better)
Translates to: KKQLNVFRKHTK*NQTVMAHVQDL
Trigger: CAAGTCTTGTACATGGGCCATCACTGTCTGGTTTCACTTCGTGTGTTTCCTAAACACATTTAGCTGCTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
3UTR TCA 72 bp GAAGAGATGGGAGAGAAAAATCTAGGAAGCACCAATTaGGGAAGTGAACCCCACTACACTTCTATCACTTTT +
Preference number: 3 (lower is better)
Translates to: EEMGEKNLGSTN*GSEPHYTSITF
Trigger: AAAAGTGATAGAAGTGTAGTGGGGTTCACTTCCTCAATTGGTGCTTCCTAGATTTTTCTCTCCCATCTCTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
3UTR GCA 72 bp ATAATGCCACTAACGCACCACTATTCTAATCCTCAGTaGAACTCATACCTTCTTTCCATTAGATGCTCATTA +
Preference number: 3 (lower is better)
Translates to: IMPLTHHYSNPQ*NSYLLSIRCSL
Trigger: TAATGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATAGTGGTGCGTTAGTGGCATTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
3UTR GCA 72 bp CTGCTTGTTAGCTCATTAACCTGTTTAGTAAAGATCTaGTTTAAAATGCCTGATGCTGTGCAGTATCATACA +
Preference number: 3 (lower is better)
Translates to: LLVSSLTCLVKI*FKMPDAVQYHT
Trigger: TGTATGATACTGCACAGCATCAGGCATTTTAAAGCAGATCTTTACTAAACAGGTTAATGAGCTAACAAGCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
3UTR TCA 72 bp CCACTTTATAAATTCTATGTAGTAACTAGTGGCTGCTaGATGTTTCCTGGGCTGATTTTGTACTTTTACACT +
Preference number: 3 (lower is better)
Translates to: PLYKFYVVTSGC*MFPGLILYFYT
Trigger: AGTGTAAAAGTACAAAATCAGCCCAGGAAACATTCAGCAGCCACTAGTTACTACATAGAATTTATAAAGTGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
3UTR GCA 72 bp TCCTGTAACAATGAATTTCAACCATTCGAAGTCTTCTaGTGCTTAACATTTACTGAATCAAAGGCTGAAGTA +
Preference number: 3 (lower is better)
Translates to: SCNNEFQPFEVF*CLTFTESKAEV
Trigger: TACTTCAGCCTTTGATTCAGTAAATGTTAAGCAGCAGAAGACTTCGAATGGTTGAAATTCATTGTTACAGGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR TCA 90 bp TCCTCCCACAGCTCCTTCCAGGATTGGGGGATCTGGTGGTGGATGCGATGGCCTCAGTACACATTGCCCTaGCCTCCCCAACTTCCAGCC +
Preference number: 4 (lower is better)
Translates to: SSHSSFQDWGIWWWMRWPQYTLP*PPQLPA
Trigger: GGCTGGAAGTTGGGGAGGTCAGGGCAATGTGTACTG...AGGCCATCGCATCCACCACCAGATCCCCCAATCCTGGAAGGAGCTGTGGGAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR GCA 90 bp GCTGGAGGGAGTTCTCGCTCTTCATTTCCTGGACGCCGGTTCCAGCTGGGGTCAAGTAGCACCAATGGCTaGAGCTGGAGGGAGTTCTCG +
Preference number: 4 (lower is better)
Translates to: AGGSSRSSFPGRRFQLGSSSTNG*SWREFS
Trigger: CGAGAACTCCCTCCAGCTGCAGCCATTGGTGCTACT...TGACCCCAGCTGGAACCGGCGTCCAGGAAATGAAGAGCGAGAACTCCCTCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR GCA 90 bp GCCCCCGTATTGGGGCTGAGATTGTTCTCTTGCTCACGCACCTCAGGGACACATATCCTGCGGGTGGGCTaGTTGGCTTGCAGAGTCTGG +
Preference number: 4 (lower is better)
Translates to: APVLGLRLFSCSRTSGTHILRVG*LACRVW
Trigger: CCAGACTCTGCAAGCCAAGCAGCCCACCCGCAGGAT...ATGTGTCCCTGAGGTGCGTGAGCAAGAGAACAATCTCAGCCCCAATACGGGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR GCA 90 bp TCCTCCGCCAGCTATGGAGTCATGAGCACCCGAACCCATTTCACAGGTGTCACATGGAGGGGTCTCCACTaGACGGCCCCCAATCACAAC +
Preference number: 4 (lower is better)
Translates to: SSASYGVMSTRTHFTGVTWRGLH*TAPNHN
Trigger: GTTGTGATTGGGGGCCGTGCAGTGGAGACCCCTCCA...TGTGACACCTGTGAAATGGGTTCGGGTGCTCATGACTCCATAGCTGGCGGAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR CCA 90 bp GCAGAGACTCTGACTGAGAAGGAGGAGAGGTCAGCTGGTGGGCACCGTGAGTTATCGCTCTTCATTTCCTaGACGCCGGTTCCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: AETLTEKEERSAGGHRELSLFIS*TPVPAG
Trigger: CCCAGCTGGAACCGGCGTCCAGGAAATGAAGAGCGA...TAACTCACGGTGCCCACCAGCTGACCTCTCCTCCTTCTCAGTCAGAGTCTCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR CCA 90 bp TCCTCCGCCAGCTATGGAGTCATGAGCACCCGAACCCATTTCACAGGTGTCACATGCGGGTGGGCTGCTTaGCTTGCAGAGTCTGGGAGA +
Preference number: 4 (lower is better)
Translates to: SSASYGVMSTRTHFTGVTCGWAA*LAESGR
Trigger: TCTCCCAGACTCTGCAAGCCAAGCAGCCCACCCGCA...TGTGACACCTGTGAAATGGGTTCGGGTGCTCATGACTCCATAGCTGGCGGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR TCA 90 bp TCCTCCCACAGCTCCTTCCAGGATTGGGGGATCTGGTGGTGGATGCGATGGCCTGCACTTATGCCTCCCTaGCATCCGTATCATCAGATG +
Preference number: 4 (lower is better)
Translates to: SSHSSFQDWGIWWWMRWPALMPP*HPYHQM
Trigger: CATCTGATGATACGGATGTCAGGGAGGCATAAGTGC...AGGCCATCGCATCCACCACCAGATCCCCCAATCCTGGAAGGAGCTGTGGGAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497580.5
CDS-3UTR GCA 90 bp TCCTCCCACAGCTCCTTCCAGGATTGGGGGATCTGGTGGTGGATGCGATGGCCTCCATTAGCATATTGGTaGGGCTTCTGCTCCGAGTTG +
Preference number: 4 (lower is better)
Translates to: SSHSSFQDWGIWWWMRWPPLAYW*GFCSEL
Trigger: CAACTCGGAGCAGAAGCCGCACCAATATGCTAATGG...AGGCCATCGCATCCACCACCAGATCCCCCAATCCTGGAAGGAGCTGTGGGAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR GCA 90 bp AGTTCTCGCTCTTCATTTCCTGGACGCCGGTTCCAGCTGGGGTCACTCATGGGTAGTAGCACCAATGGCTaGAGCTGGAGGGAGTTCTCG +
Preference number: 4 (lower is better)
Translates to: SSRSSFPGRRFQLGSLMGSSTNG*SWREFS
Trigger: CGAGAACTCCCTCCAGCTGCAGCCATTGGTGCTACT...ACCCATGAGTGACCCCAGCTGGAACCGGCGTCCAGGAAATGAAGAGCGAGAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR GCA 90 bp GCCCCCGTATTGGGGCTGAGATTGTTCTCTTGCTCACGCACCTCAGGGACACATAGTAGCACCAATGGCTaGAGCTGGAGGGAGTTCTCG +
Preference number: 4 (lower is better)
Translates to: APVLGLRLFSCSRTSGTHSSTNG*SWREFS
Trigger: CGAGAACTCCCTCCAGCTGCAGCCATTGGTGCTACT...ATGTGTCCCTGAGGTGCGTGAGCAAGAGAACAATCTCAGCCCCAATACGGGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR GCA 90 bp TCCTCCGCCAGCTATGGAGTCATGAGCACCCGAACCCATTTCACAGGTGTCACAAGCCACCTGAGCTTGTaGACTGAGTCTAGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: SSASYGVMSTRTHFTGVTSHLSL*TESRAG
Trigger: CCCAGCCCTAGACTCAGTGCACAAGCTCAGGTGGCT...TGTGACACCTGTGAAATGGGTTCGGGTGCTCATGACTCCATAGCTGGCGGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR CCA 90 bp TGGCTGCAGCTGGAGGGAGTTCTCGCTCTTCATTTCCTGGACGCCGGTTCCAGCGACCAACACCTCTTCTaGTTGCACCTCCTGAATGGT +
Preference number: 4 (lower is better)
Translates to: WLQLEGVLALHFLDAGSSDQHLF*LHLLNG
Trigger: ACCATTCAGGAGGTGCAACCAGAAGAGGTGTTGGTC...GCTGGAACCGGCGTCCAGGAAATGAAGAGCGAGAACTCCCTCCAGCTGCAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR CCA 90 bp AGTTCTCGCTCTTCATTTCCTGGACGCCGGTTCCAGCTGGGGTCACTCATGGGTTGGGGGATCTGGTGGTaGATGCGATGGCCTAGCATA +
Preference number: 4 (lower is better)
Translates to: SSRSSFPGRRFQLGSLMGWGIWW*MRWPSI
Trigger: TATGCTAGGCCATCGCATCCACCACCAGATCCCCCA...ACCCATGAGTGACCCCAGCTGGAACCGGCGTCCAGGAAATGAAGAGCGAGAACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR CCA 90 bp TCCTCCGCCAGCTATGGAGTCATGAGCACCCGAACCCATTTCACAGGTGTCACAGATTGGGGGATCTGGTaGTGGATGCGATGGCCTAGC +
Preference number: 4 (lower is better)
Translates to: SSASYGVMSTRTHFTGVTDWGIW*WMRWPS
Trigger: GCTAGGCCATCGCATCCACCACCAGATCCCCCAATC...TGTGACACCTGTGAAATGGGTTCGGGTGCTCATGACTCCATAGCTGGCGGAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR CCA 90 bp GCCCCCGTATTGGGGCTGAGATTGTTCTCTTGCTCACGCACCTCAGGGACACATAGCTCCTTCCAGGATTaGGGGATCTGGTGGTGGATG +
Preference number: 4 (lower is better)
Translates to: APVLGLRLFSCSRTSGTHSSFQD*GIWWWM
Trigger: CATCCACCACCAGATCCCCCAATCCTGGAAGGAGCT...ATGTGTCCCTGAGGTGCGTGAGCAAGAGAACAATCTCAGCCCCAATACGGGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR CCA 90 bp AGTTCTCGCTCTTCATTTCCTGGACGCCGGTTCCAGCTGGGGTCACTCATGGGTACCAATGGCTGCAGCTaGAGGGAGTTCTCGCTCTTC +
Preference number: 4 (lower is better)
Translates to: SSRSSFPGRRFQLGSLMGTNGCS*REFSLF
Trigger: GAAGAGCGAGAACTCCCTCCAGCTGCAGCCATTGGT...ACCCATGAGTGACCCCAGCTGGAACCGGCGTCCAGGAAATGAAGAGCGAGAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR CCA 90 bp GCCCCCGTATTGGGGCTGAGATTGTTCTCTTGCTCACGCACCTCAGGGACACATCAGATGTCAAATCTCTaGGGGGTCTACCCTCAGCCC +
Preference number: 4 (lower is better)
Translates to: APVLGLRLFSCSRTSGTHQMSNL*GVYPQP
Trigger: GGGCTGAGGGTAGACCCCCCAGAGATTTGACATCTG...ATGTGTCCCTGAGGTGCGTGAGCAAGAGAACAATCTCAGCCCCAATACGGGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR TCA 90 bp GAGACTCTGACTGAGAAGGAGGAGAGGTCAGCTGGTGGGCACCGTGAGTTATTTCAGTACACATTGCCCTaGCCTCCCCAACTTCCAGCC +
Preference number: 4 (lower is better)
Translates to: ETLTEKEERSAGGHRELFQYTLP*PPQLPA
Trigger: GGCTGGAAGTTGGGGAGGTCAGGGCAATGTGTACTG...AAATAACTCACGGTGCCCACCAGCTGACCTCTCCTCCTTCTCAGTCAGAGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR TCA 90 bp GATGCACCTTCTCAGAGATCTGTTTGTCTGATTAACAGTCTGCTGCCTTGGTGGTGCCGGACACAACACTaGGGCCTGGTGTGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: DAPSQRSVCLINSLLPWWCRTQH*GLVCWG
Trigger: GCCCCAGCACACCAGGCCTCAGTGTTGTGTCCGGCA...CCACCAAGGCAGCAGACTGTTAATCAGACAAACAGATCTCTGAGAAGGTGCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp GCTTTGGTGTGCCTCCATGGCCAATTTTTCAGGCACCAAAACCCATTCCTGATTTGCCGGACACAACACTaGGGCCTGGTGTGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: ALVCLHGQFFRHQNPFLICRTQH*GLVCWG
Trigger: GCCCCAGCACACCAGGCCTCAGTGTTGTGTCCGGCA...AATCAGGAATGGGTTTTGGTGCCTGAAAAATTGGCCATGGAGGCACACCAAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR TCA 90 bp TCCTCCGCCAGCTATGGAGTCATGAGCACCCGAACCCATTTCACAGGTGTCACATCTGTAAGAGAAAGCTaGATCCTGCGGGTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: SSASYGVMSTRTHFTGVTSVRES*ILRVGC
Trigger: GCAGCCCACCCGCAGGATTCAGCTTTCTCTTACAGA...TGTGACACCTGTGAAATGGGTTCGGGTGCTCATGACTCCATAGCTGGCGGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR CCA 90 bp TCCTCCGCCAGCTATGGAGTCATGAGCACCCGAACCCATTTCACAGGTGTCACACCAGGTGAGCCTGTGTaGTCTGTAGTCCTTGTCGAC +
Preference number: 4 (lower is better)
Translates to: SSASYGVMSTRTHFTGVTPGEPV*SVVLVD
Trigger: GTCGACAAGGACTACAGACCACACAGGCTCACCTGG...TGTGACACCTGTGAAATGGGTTCGGGTGCTCATGACTCCATAGCTGGCGGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR TCA 90 bp GCTGGAGGGAGTTCTCGCTCTTCATTTCCTGGACGCCGGTTCCAGCTGGGGTCAAAGAGTTTTTCCTGCTaGGATGGAGAGAACCTCTCA +
Preference number: 4 (lower is better)
Translates to: AGGSSRSSFPGRRFQLGSKSFSC*DGENLS
Trigger: TGAGAGGTTCTCTCCATCTCAGCAGGAAAAACTCTT...TGACCCCAGCTGGAACCGGCGTCCAGGAAATGAAGAGCGAGAACTCCCTCCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR TCA 90 bp TCCTCCGCCAGCTATGGAGTCATGAGCACCCGAACCCATTTCACAGGTGTCACATTCAGTCTCTCCTCTTaGGGAGTCCTTACTCGGGGA +
Preference number: 4 (lower is better)
Translates to: SSASYGVMSTRTHFTGVTFSLSS*GVLTRG
Trigger: TCCCCGAGTAAGGACTCCTCAAGAGGAGAGACTGAA...TGTGACACCTGTGAAATGGGTTCGGGTGCTCATGACTCCATAGCTGGCGGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR TCA 90 bp GCCCCCGTATTGGGGCTGAGATTGTTCTCTTGCTCACGCACCTCAGGGACACATGAAAGGCTCAAAGGCTaGTCACTGAATGCCAGCTAC +
Preference number: 4 (lower is better)
Translates to: APVLGLRLFSCSRTSGTHERLKG*SLNASY
Trigger: GTAGCTGGCATTCAGTGATCAGCCTTTGAGCCTTTC...ATGTGTCCCTGAGGTGCGTGAGCAAGAGAACAATCTCAGCCCCAATACGGGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297933.11
CDS-3UTR TCA 90 bp TCCTCCGCCAGCTATGGAGTCATGAGCACCCGAACCCATTTCACAGGTGTCACAAGCAACCAGGGAGGCTaGGCCATGAGAATCACTAGA +
Preference number: 4 (lower is better)
Translates to: SSASYGVMSTRTHFTGVTSNQGG*AMRITR
Trigger: TCTAGTGATTCTCATGGCTCAGCCTCCCTGGTTGCT...TGTGACACCTGTGAAATGGGTTCGGGTGCTCATGACTCCATAGCTGGCGGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR TCA 90 bp GCCCCCGTATTGGGGCTGAGATTGTTCTCTTGCTCACGCACCTCAGGGACACATCTAGGAAGCACCAATTaGGGAAGTGAACCCCACTAC +
Preference number: 4 (lower is better)
Translates to: APVLGLRLFSCSRTSGTHLGSTN*GSEPHY
Trigger: GTAGTGGGGTTCACTTCCTCAATTGGTGCTTCCTAG...ATGTGTCCCTGAGGTGCGTGAGCAAGAGAACAATCTCAGCCCCAATACGGGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR TCA 90 bp TCCTCCCACAGCTCCTTCCAGGATTGGGGGATCTGGTGGTGGATGCGATGGCCTGCCTTAGCATTCATCTaGGTGGAACCACTTTCTACA +
Preference number: 4 (lower is better)
Translates to: SSHSSFQDWGIWWWMRWPALAFI*VEPLST
Trigger: TGTAGAAAGTGGTTCCACTCAGATGAATGCTAAGGC...AGGCCATCGCATCCACCACCAGATCCCCCAATCCTGGAAGGAGCTGTGGGAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497580.5
CDS-3UTR GCA 90 bp TGGCTGCAGCTGGAGGGAGTTCTCGCTCTTCATTTCCTGGACGCCGGTTCCAGCAAAAGGCGGCCTACCTaGATCAGATTAAATCGTGCT +
Preference number: 4 (lower is better)
Translates to: WLQLEGVLALHFLDAGSSKRRPT*IRLNRA
Trigger: AGCACGATTTAATCTGATGCAGGTAGGCCGCCTTTT...GCTGGAACCGGCGTCCAGGAAATGAAGAGCGAGAACTCCCTCCAGCTGCAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR GCA 90 bp GGTCACTCATGGGTCTCCGGACAGAAGATACTATATCAGAGCTCCTGCTTCGAATGGAGGGGTCTCCACTaGACGGCCCCCAATCACAAC +
Preference number: 4 (lower is better)
Translates to: GHSWVSGQKILYQSSCFEWRGLH*TAPNHN
Trigger: GTTGTGATTGGGGGCCGTGCAGTGGAGACCCCTCCA...TTCGAAGCAGGAGCTCTGATATAGTATCTTCTGTCCGGAGACCCATGAGTGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR GCA 90 bp AGTTCTCGCTCTTCATTTCCTGGACGCCGGTTCCAGCTGGGGTCACTCATGGGTCCATTAGCATATTGGTaGGGCTTCTGCTCCGAGTTG +
Preference number: 4 (lower is better)
Translates to: SSRSSFPGRRFQLGSLMGPLAYW*GFCSEL
Trigger: CAACTCGGAGCAGAAGCCGCACCAATATGCTAATGG...ACCCATGAGTGACCCCAGCTGGAACCGGCGTCCAGGAAATGAAGAGCGAGAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR GCA 90 bp GTTCCAGCTGGGGTCACTCATGGGTCTCCGGACAGAAGATACTATATCAGAGCTTGCAGACGCTCCTCCTaGTTTAGGTCTGGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: VPAGVTHGSPDRRYYIRACRRSS*FRSGAS
Trigger: AGAGGCCCCAGACCTAAAGCAGGAGGAGCGTCTGCA...AGCTCTGATATAGTATCTTCTGTCCGGAGACCCATGAGTGACCCCAGCTGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR GCA 90 bp GCTGGAGGGAGTTCTCGCTCTTCATTTCCTGGACGCCGGTTCCAGCTGGGGTCAATGCCTTTGCTTGAATaGCTCCATTTCAGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: AGGSSRSSFPGRRFQLGSMPLLE*LHFSWS
Trigger: ACTCCAGCTGAAATGGAGGCATTCAAGCAAAGGCAT...TGACCCCAGCTGGAACCGGCGTCCAGGAAATGAAGAGCGAGAACTCCCTCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR GCA 90 bp GATGCACCTTCTCAGAGATCTGTTTGTCTGATTAACAGTCTGCTGCCTTGGTGGCCCCTGCAACAGCTGTaGTGTGCTCCTCCGCCAGCT +
Preference number: 4 (lower is better)
Translates to: DAPSQRSVCLINSLLPWWPLQQL*CAPPPA
Trigger: AGCTGGCGGAGGAGCACAGCACAGCTGTTGCAGGGG...CCACCAAGGCAGCAGACTGTTAATCAGACAAACAGATCTCTGAGAAGGTGCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR GCA 90 bp CTGCACTCAGATCTCAGGTCTTCAATCTTATTGGGAATATCCTCAGAGGTTGCAGCCTGTTGGCTTCCCTaGGTCCTGCAGCGGCGCTGC +
Preference number: 4 (lower is better)
Translates to: LHSDLRSSILLGISSEVAACWLP*VLQRRC
Trigger: GCAGCGCCGCTGCAGGACGCAGGGAAGCCAACAGGC...TGCAACCTCTGAGGATATTCCCAATAAGATTGAAGACCTGAGATCTGAGTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497580.5
CDS-3UTR CCA 90 bp TGGATGCGATGGCCTAGCATAGTGAACCTTTGGCCTTACCACAGCAGAAGCCCCATTGACGGAAGACAATaGAGGGGTCTCCACTGCACG +
Preference number: 4 (lower is better)
Translates to: WMRWPSIVNLWPYHSRSPIDGRQ*RGLHCT
Trigger: CGTGCAGTGGAGACCCCTCCATTGTCTTCCGTCAAT...GGGGCTTCTGCTGTGGTAAGGCCAAAGGTTCACTATGCTAGGCCATCGCATCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR CCA 90 bp AGAGGTCAGCTGGTGGGCACCGTGAGTTATTTCATCCATGTCTGGACTAGTGACCAGGATTGGGGGATCTaGTGGTGGATGCGATGGCCT +
Preference number: 4 (lower is better)
Translates to: RGQLVGTVSYFIHVWTSDQDWGI*WWMRWP
Trigger: AGGCCATCGCATCCACCACCAGATCCCCCAATCCTG...GTCACTAGTCCAGACATGGATGAAATAACTCACGGTGCCCACCAGCTGACCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR CCA 90 bp GAGTTAAAACATGGGAACCAAAGTTTGGCAACCTGGCCTCATTTCCTCCCACAGGACGCCGGTTCCAGCTaGGGTCACTCATGGGTCTCC +
Preference number: 4 (lower is better)
Translates to: ELKHGNQSLATWPHFLPQDAGSS*GHSWVS
Trigger: GGAGACCCATGAGTGACCCCAGCTGGAACCGGCGTC...CTGTGGGAGGAAATGAGGCCAGGTTGCCAAACTTTGGTTCCCATGTTTTAACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
3UTR CAA 72 bp GAACACAGCCCCCGTATTGGGGCTGAGATTGTTCTCTaGCTCACGCACCTCAGGGACACATTTGTAAAGCCC +
Preference number: 4 (lower is better)
Translates to: EHSPRIGAEIVL*LTHLRDTFVKP
Trigger: GGGCTTTACAAATGTGTCCCTGAGGTGCGTGAGCAAGAGAACAATCTCAGCCCCAATACGGGGGCTGTGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
3UTR CAA 72 bp TACGGCAAGAACACAGCCCCCGTATTGGGGCTGAGATaGTTCTCTTGCTCACGCACCTCAGGGACACATTTG +
Preference number: 4 (lower is better)
Translates to: YGKNTAPVLGLR*FSCSRTSGTHL
Trigger: CAAATGTGTCCCTGAGGTGCGTGAGCAAGAGAACAATCTCAGCCCCAATACGGGGGCTGTGTTCTTGCCGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR TCA 90 bp GCTGGAGGGAGTTCTCGCTCTTCATTTCCTGGACGCCGGTTCCAGCTGGGGTCACTCACTCACTGTTTCTaGTATGTCCCTATCATCTGT +
Preference number: 4 (lower is better)
Translates to: AGGSSRSSFPGRRFQLGSLTHCF*YVPIIC
Trigger: ACAGATGATAGGGACATATCAGAAACAGTGAGTGAG...TGACCCCAGCTGGAACCGGCGTCCAGGAAATGAAGAGCGAGAACTCCCTCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR TCA 90 bp GATGCACCTTCTCAGAGATCTGTTTGTCTGATTAACAGTCTGCTGCCTTGGTGGGGTAGGCGGATCACTTaGGGCCAGGAGTTCGAGACC +
Preference number: 4 (lower is better)
Translates to: DAPSQRSVCLINSLLPWWGRRIT*GQEFET
Trigger: GGTCTCGAACTCCTGGCCTCAAGTGATCCGCCTACC...CCACCAAGGCAGCAGACTGTTAATCAGACAAACAGATCTCTGAGAAGGTGCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR TCA 90 bp TGGCTGCAGCTGGAGGGAGTTCTCGCTCTTCATTTCCTGGACGCCGGTTCCAGCACCTTTAGGCATGGCTaGAACAAAACGTTTTCTCCA +
Preference number: 4 (lower is better)
Translates to: WLQLEGVLALHFLDAGSSTFRHG*NKTFSP
Trigger: TGGAGAAAACGTTTTGTTTCAGCCATGCCTAAAGGT...GCTGGAACCGGCGTCCAGGAAATGAAGAGCGAGAACTCCCTCCAGCTGCAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497580.5
CDS-3UTR GCA 90 bp TCCTCCGCCAGCTATGGAGTCATGAGCACCCGAACCCATTTCACAGGTGTCACAGAGATCAGTACACATTaGCCTGACCTCCCCAACTTC +
Preference number: 4 (lower is better)
Translates to: SSASYGVMSTRTHFTGVTEISTH*PDLPNF
Trigger: GAAGTTGGGGAGGTCAGGGCAATGTGTACTGATCTC...TGTGACACCTGTGAAATGGGTTCGGGTGCTCATGACTCCATAGCTGGCGGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR GCA 90 bp CAGCTGGGGTCACTCATGGGTCTCCGGACAGAAGATACTATATCAGAGCTCCTGCCAGTCATTGCTAACTaGTGCAAAAGGCGGCCTACC +
Preference number: 4 (lower is better)
Translates to: QLGSLMGLRTEDTISELLPVIAN*CKRRPT
Trigger: GGTAGGCCGCCTTTTGCAGCAGTTAGCAATGACTGG...CAGGAGCTCTGATATAGTATCTTCTGTCCGGAGACCCATGAGTGACCCCAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR GCA 90 bp GCCCCCGTATTGGGGCTGAGATTGTTCTCTTGCTCACGCACCTCAGGGACACATCAAACTTTCCAAGGCTaGTCTTTGTTCGGGGATCTC +
Preference number: 4 (lower is better)
Translates to: APVLGLRLFSCSRTSGTHQTFQG*SLFGDL
Trigger: GAGATCCCCGAACAAAGAGCAGCCTTGGAAAGTTTG...ATGTGTCCCTGAGGTGCGTGAGCAAGAGAACAATCTCAGCCCCAATACGGGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR GCA 90 bp TTAAAACATGGGAACCAAAGTTTGGCAACCTGGCCTCATTTCCTCCCACAGCTCTGGAGGGGTCTCCACTaGACGGCCCCCAATCACAAC +
Preference number: 4 (lower is better)
Translates to: LKHGNQSLATWPHFLPQLWRGLH*TAPNHN
Trigger: GTTGTGATTGGGGGCCGTGCAGTGGAGACCCCTCCA...GAGCTGTGGGAGGAAATGAGGCCAGGTTGCCAAACTTTGGTTCCCATGTTTTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR GCA 90 bp GCAGAGACTCTGACTGAGAAGGAGGAGAGGTCAGCTGGTGGGCACCGTGAGTTACTTCCAGATTATCACTaGAGAGGGAAAAGCGCAAGG +
Preference number: 4 (lower is better)
Translates to: AETLTEKEERSAGGHRELLPDYH*RGKSAR
Trigger: CCTTGCGCTTTTCCCTCTGCAGTGATAATCTGGAAG...TAACTCACGGTGCCCACCAGCTGACCTCTCCTCCTTCTCAGTCAGAGTCTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR GCA 90 bp TCCTCCGCCAGCTATGGAGTCATGAGCACCCGAACCCATTTCACAGGTGTCACACTCTGCTGCAGCACCTaGAATTTCTTGCAAGCGATC +
Preference number: 4 (lower is better)
Translates to: SSASYGVMSTRTHFTGVTLCCST*NFLQAI
Trigger: GATCGCTTGCAAGAAATTGCAGGTGCTGCAGCAGAG...TGTGACACCTGTGAAATGGGTTCGGGTGCTCATGACTCCATAGCTGGCGGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR GCA 90 bp TCCTCCGCCAGCTATGGAGTCATGAGCACCCGAACCCATTTCACAGGTGTCACAGGAGGCACAGCAAACTaGCTAACATGTTCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: SSASYGVMSTRTHFTGVTGGTAN*LTCSLL
Trigger: CAGCAGAGAACATGTTAGGCAGTTTGCTGTGCCTCC...TGTGACACCTGTGAAATGGGTTCGGGTGCTCATGACTCCATAGCTGGCGGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR GCA 90 bp GCCCCCGTATTGGGGCTGAGATTGTTCTCTTGCTCACGCACCTCAGGGACACATCCCCAAAATCAGAGCTaGACTCAGATCTCAGGTCTT +
Preference number: 4 (lower is better)
Translates to: APVLGLRLFSCSRTSGTHPQNQS*TQISGL
Trigger: AAGACCTGAGATCTGAGTGCAGCTCTGATTTTGGGG...ATGTGTCCCTGAGGTGCGTGAGCAAGAGAACAATCTCAGCCCCAATACGGGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR GCA 90 bp GATGCACCTTCTCAGAGATCTGTTTGTCTGATTAACAGTCTGCTGCCTTGGTGGATCCTGCGGGTGGGCTaGTTGGCTTGCAGAGTCTGG +
Preference number: 4 (lower is better)
Translates to: DAPSQRSVCLINSLLPWWILRVG*LACRVW
Trigger: CCAGACTCTGCAAGCCAAGCAGCCCACCCGCAGGAT...CCACCAAGGCAGCAGACTGTTAATCAGACAAACAGATCTCTGAGAAGGTGCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp GATGCACCTTCTCAGAGATCTGTTTGTCTGATTAACAGTCTGCTGCCTTGGTGGCACAACACTGAGGCCTaGTGTGCTGGGGCGGGAACT +
Preference number: 4 (lower is better)
Translates to: DAPSQRSVCLINSLLPWWHNTEA*CAGAGT
Trigger: AGTTCCCGCCCCAGCACACCAGGCCTCAGTGTTGTG...CCACCAAGGCAGCAGACTGTTAATCAGACAAACAGATCTCTGAGAAGGTGCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp TCTCTCCTCTTGAGGAGTCCTTACTCGGGGATGAAGATGATGAATGAGGTGCAGCAGGATTGGGGGATCTaGTGGTGGATGCGATGGCCT +
Preference number: 4 (lower is better)
Translates to: SLLLRSPYSGMKMMNEVQQDWGI*WWMRWP
Trigger: AGGCCATCGCATCCACCACCAGATCCCCCAATCCTG...CTGCACCTCATTCATCATCTTCATCCCCGAGTAAGGACTCCTCAAGAGGAGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR CCA 90 bp CAGCTGGGGTCACTCATGGGTCTCCGGACAGAAGATACTATATCAGAGCTCCTGAGCTGGGGTCACTCATaGGTCTCCGGACAGAAGATA +
Preference number: 4 (lower is better)
Translates to: QLGSLMGLRTEDTISELLSWGHS*VSGQKI
Trigger: TATCTTCTGTCCGGAGACCCATGAGTGACCCCAGCT...CAGGAGCTCTGATATAGTATCTTCTGTCCGGAGACCCATGAGTGACCCCAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR CCA 90 bp GAGACTCTGACTGAGAAGGAGGAGAGGTCAGCTGGTGGGCACCGTGAGTTATTTAGCTGGGGTCACTCATaGGTCTCCGGACAGAAGATA +
Preference number: 4 (lower is better)
Translates to: ETLTEKEERSAGGHRELFSWGHS*VSGQKI
Trigger: TATCTTCTGTCCGGAGACCCATGAGTGACCCCAGCT...AAATAACTCACGGTGCCCACCAGCTGACCTCTCCTCCTTCTCAGTCAGAGTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR CCA 90 bp GATGCACCTTCTCAGAGATCTGTTTGTCTGATTAACAGTCTGCTGCCTTGGTGGTGCGGGTGGGCTGCTTaGCTTGCAGAGTCTGGGAGA +
Preference number: 4 (lower is better)
Translates to: DAPSQRSVCLINSLLPWWCGWAA*LAESGR
Trigger: TCTCCCAGACTCTGCAAGCCAAGCAGCCCACCCGCA...CCACCAAGGCAGCAGACTGTTAATCAGACAAACAGATCTCTGAGAAGGTGCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp GATGCACCTTCTCAGAGATCTGTTTGTCTGATTAACAGTCTGCTGCCTTGGTGGGCTGAATCCTGCGGGTaGGCTGCTTGGCTTGCAGAG +
Preference number: 4 (lower is better)
Translates to: DAPSQRSVCLINSLLPWWAESCG*AAWLAE
Trigger: CTCTGCAAGCCAAGCAGCCCACCCGCAGGATTCAGC...CCACCAAGGCAGCAGACTGTTAATCAGACAAACAGATCTCTGAGAAGGTGCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp GCCCCCGTATTGGGGCTGAGATTGTTCTCTTGCTCACGCACCTCAGGGACACATTTGTGCTTGAAGCTTTaGTGTGCCTCCATGGCCAAT +
Preference number: 4 (lower is better)
Translates to: APVLGLRLFSCSRTSGTHLCLKL*CASMAN
Trigger: ATTGGCCATGGAGGCACACCAAAGCTTCAAGCACAA...ATGTGTCCCTGAGGTGCGTGAGCAAGAGAACAATCTCAGCCCCAATACGGGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR CCA 90 bp GCCCCCGTATTGGGGCTGAGATTGTTCTCTTGCTCACGCACCTCAGGGACACATAGTACTGGAAGGCAGTaGAGGAAGAAACATTTGGGG +
Preference number: 4 (lower is better)
Translates to: APVLGLRLFSCSRTSGTHSTGRQ*RKKHLG
Trigger: CCCCAAATGTTTCTTCCTCCACTGCCTTCCAGTACT...ATGTGTCCCTGAGGTGCGTGAGCAAGAGAACAATCTCAGCCCCAATACGGGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
3UTR CAA 72 bp GCTACAGATTCTTACGGCAAGAACACAGCCCCCGTATaGGGGCTGAGATTGTTCTCTTGCTCACGCACCTCA +
Preference number: 4 (lower is better)
Translates to: ATDSYGKNTAPV*GLRLFSCSRTS
Trigger: TGAGGTGCGTGAGCAAGAGAACAATCTCAGCCCCAATACGGGGGCTGTGTTCTTGCCGTAAGAATCTGTAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR TCA 90 bp GCTTTGGTGTGCCTCCATGGCCAATTTTTCAGGCACCAAAACCCATTCCTGATTCAGTACACATTGCCCTaGCCTCCCCAACTTCCAGCC +
Preference number: 4 (lower is better)
Translates to: ALVCLHGQFFRHQNPFLIQYTLP*PPQLPA
Trigger: GGCTGGAAGTTGGGGAGGTCAGGGCAATGTGTACTG...AATCAGGAATGGGTTTTGGTGCCTGAAAAATTGGCCATGGAGGCACACCAAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR TCA 90 bp GATGCACCTTCTCAGAGATCTGTTTGTCTGATTAACAGTCTGCTGCCTTGGTGGCAGTACACATTGCCCTaGCCTCCCCAACTTCCAGCC +
Preference number: 4 (lower is better)
Translates to: DAPSQRSVCLINSLLPWWQYTLP*PPQLPA
Trigger: GGCTGGAAGTTGGGGAGGTCAGGGCAATGTGTACTG...CCACCAAGGCAGCAGACTGTTAATCAGACAAACAGATCTCTGAGAAGGTGCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp TTGAATGCCTCCATTTCAGCTGGAGTTAAAACATGGGAACCAAAGTTTGGCAACTGCCGGACACAACACTaGGGCCTGGTGTGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: LNASISAGVKTWEPKFGNCRTQH*GLVCWG
Trigger: GCCCCAGCACACCAGGCCTCAGTGTTGTGTCCGGCA...GTTGCCAAACTTTGGTTCCCATGTTTTAACTCCAGCTGAAATGGAGGCATTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265956.8
CDS-3UTR TCA 90 bp ACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGCCGGACACAACACTaGGGCCTGGTGTGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: TKQSSAFKAADAPSQRSVCRTQH*GLVCWG
Trigger: GCCCCAGCACACCAGGCCTCAGTGTTGTGTCCGGCA...AACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp GCCCCCGTATTGGGGCTGAGATTGTTCTCTTGCTCACGCACCTCAGGGACACATGATGAAGATGATGAATaGGGTGCAGCCACCAAAGAA +
Preference number: 4 (lower is better)
Translates to: APVLGLRLFSCSRTSGTHDEDDE*GAATKE
Trigger: TTCTTTGGTGGCTGCACCTCATTCATCATCTTCATC...ATGTGTCCCTGAGGTGCGTGAGCAAGAGAACAATCTCAGCCCCAATACGGGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR TCA 90 bp AGAGGTCAGCTGGTGGGCACCGTGAGTTATTTCATCCATGTCTGGACTAGTGACTTCAGTCTCTCCTCTTaGGGAGTCCTTACTCGGGGA +
Preference number: 4 (lower is better)
Translates to: RGQLVGTVSYFIHVWTSDFSLSS*GVLTRG
Trigger: TCCCCGAGTAAGGACTCCTCAAGAGGAGAGACTGAA...GTCACTAGTCCAGACATGGATGAAATAACTCACGGTGCCCACCAGCTGACCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR TCA 90 bp GCCCCCGTATTGGGGCTGAGATTGTTCTCTTGCTCACGCACCTCAGGGACACATGGTGAGATGTCTAAGTaGCTTAGTGACCTTCACACT +
Preference number: 4 (lower is better)
Translates to: APVLGLRLFSCSRTSGTHGEMSK*LSDLHT
Trigger: AGTGTGAAGGTCACTAAGTCACTTAGACATCTCACC...ATGTGTCCCTGAGGTGCGTGAGCAAGAGAACAATCTCAGCCCCAATACGGGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR TCA 90 bp GATGCACCTTCTCAGAGATCTGTTTGTCTGATTAACAGTCTGCTGCCTTGGTGGGGCAGGGGAATCACTTaGACTGGGAGGTGGAGGTTG +
Preference number: 4 (lower is better)
Translates to: DAPSQRSVCLINSLLPWWGRGIT*TGRWRL
Trigger: CAACCTCCACCTCCCAGTTCAAGTGATTCCCCTGCC...CCACCAAGGCAGCAGACTGTTAATCAGACAAACAGATCTCTGAGAAGGTGCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR TCA 90 bp GCTTTGGTGTGCCTCCATGGCCAATTTTTCAGGCACCAAAACCCATTCCTGATTGGCAGGGGAATCACTTaGACTGGGAGGTGGAGGTTG +
Preference number: 4 (lower is better)
Translates to: ALVCLHGQFFRHQNPFLIGRGIT*TGRWRL
Trigger: CAACCTCCACCTCCCAGTTCAAGTGATTCCCCTGCC...AATCAGGAATGGGTTTTGGTGCCTGAAAAATTGGCCATGGAGGCACACCAAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR TCA 90 bp GCCCCCGTATTGGGGCTGAGATTGTTCTCTTGCTCACGCACCTCAGGGACACATCACCAATTGAGGAAGTaGACCCCACTACACTTCTAT +
Preference number: 4 (lower is better)
Translates to: APVLGLRLFSCSRTSGTHHQLRK*TPLHFY
Trigger: ATAGAAGTGTAGTGGGGTTCACTTCCTCAATTGGTG...ATGTGTCCCTGAGGTGCGTGAGCAAGAGAACAATCTCAGCCCCAATACGGGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR GCA 90 bp TCCTCCGCCAGCTATGGAGTCATGAGCACCCGAACCCATTTCACAGGTGTCACACAAACTTTCCAAGGCTaGTCTTTGTTCGGGGATCTC +
Preference number: 4 (lower is better)
Translates to: SSASYGVMSTRTHFTGVTQTFQG*SLFGDL
Trigger: GAGATCCCCGAACAAAGAGCAGCCTTGGAAAGTTTG...TGTGACACCTGTGAAATGGGTTCGGGTGCTCATGACTCCATAGCTGGCGGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR GCA 90 bp TGGATGCGATGGCCTAGCATAGTGAACCTTTGGCCTTACCACAGCAGAAGCCCCCAAACTTTCCAAGGCTaGTCTTTGTTCGGGGATCTC +
Preference number: 4 (lower is better)
Translates to: WMRWPSIVNLWPYHSRSPQTFQG*SLFGDL
Trigger: GAGATCCCCGAACAAAGAGCAGCCTTGGAAAGTTTG...GGGGCTTCTGCTGTGGTAAGGCCAAAGGTTCACTATGCTAGGCCATCGCATCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR GCA 90 bp CAGCTGGGGTCACTCATGGGTCTCCGGACAGAAGATACTATATCAGAGCTCCTGGGAGGCACAGCAAACTaGCTAACATGTTCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: QLGSLMGLRTEDTISELLGGTAN*LTCSLL
Trigger: CAGCAGAGAACATGTTAGGCAGTTTGCTGTGCCTCC...CAGGAGCTCTGATATAGTATCTTCTGTCCGGAGACCCATGAGTGACCCCAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR GCA 90 bp GATGCACCTTCTCAGAGATCTGTTTGTCTGATTAACAGTCTGCTGCCTTGGTGGTGCAGACGCTCCTCCTaGTTTAGGTCTGGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: DAPSQRSVCLINSLLPWWCRRSS*FRSGAS
Trigger: AGAGGCCCCAGACCTAAAGCAGGAGGAGCGTCTGCA...CCACCAAGGCAGCAGACTGTTAATCAGACAAACAGATCTCTGAGAAGGTGCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp GCCCCCGTATTGGGGCTGAGATTGTTCTCTTGCTCACGCACCTCAGGGACACATAATATCCTCAGAGGTTaGACTTATGCCGGACACAAC +
Preference number: 4 (lower is better)
Translates to: APVLGLRLFSCSRTSGTHNILRG*TYAGHN
Trigger: GTTGTGTCCGGCATAAGTGCAACCTCTGAGGATATT...ATGTGTCCCTGAGGTGCGTGAGCAAGAGAACAATCTCAGCCCCAATACGGGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR GCA 90 bp AGTTCTCGCTCTTCATTTCCTGGACGCCGGTTCCAGCTGGGGTCACTCATGGGTATGCCTTTGCTTGAATaGCTCCATTTCAGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: SSRSSFPGRRFQLGSLMGMPLLE*LHFSWS
Trigger: ACTCCAGCTGAAATGGAGGCATTCAAGCAAAGGCAT...ACCCATGAGTGACCCCAGCTGGAACCGGCGTCCAGGAAATGAAGAGCGAGAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR GCA 90 bp ACACACGAAGTGAAACCAGACAGTGATGGCCCATGTACAAGACTTGTGCTTGAAATCCTGCGGGTGGGCTaGTTGGCTTGCAGAGTCTGG +
Preference number: 4 (lower is better)
Translates to: THEVKPDSDGPCTRLVLEILRVG*LACRVW
Trigger: CCAGACTCTGCAAGCCAAGCAGCCCACCCGCAGGAT...TTCAAGCACAAGTCTTGTACATGGGCCATCACTGTCTGGTTTCACTTCGTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR GCA 90 bp GCTTTGGTGTGCCTCCATGGCCAATTTTTCAGGCACCAAAACCCATTCCTGATTCCGGGCTTGGTGACATaGGCCTGTAGTCCTAGCTAC +
Preference number: 4 (lower is better)
Translates to: ALVCLHGQFFRHQNPFLIPGLVT*ACSPSY
Trigger: GTAGCTAGGACTACAGGCGCATGTCACCAAGCCCGG...AATCAGGAATGGGTTTTGGTGCCTGAAAAATTGGCCATGGAGGCACACCAAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR GCA 90 bp GATGCACCTTCTCAGAGATCTGTTTGTCTGATTAACAGTCTGCTGCCTTGGTGGGCAACAGCTGTGCTGTaGTCCTCCGCCAGCTATGGA +
Preference number: 4 (lower is better)
Translates to: DAPSQRSVCLINSLLPWWATAVL*SSASYG
Trigger: TCCATAGCTGGCGGAGGAGCACAGCACAGCTGTTGC...CCACCAAGGCAGCAGACTGTTAATCAGACAAACAGATCTCTGAGAAGGTGCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR GCA 90 bp TCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCTGATTCCCCTGCAACAGCTGTaGTGTGCTCCTCCGCCAGCT +
Preference number: 4 (lower is better)
Translates to: SSAFKAADAPSQRSVCLIPLQQL*CAPPPA
Trigger: AGCTGGCGGAGGAGCACAGCACAGCTGTTGCAGGGG...AATCAGACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR GCA 90 bp TCCTGGACGCCGGTTCCAGCTGGGGTCACTCATGGGTCTCCGGACAGAAGATACGAGATTCTGGGGCTTTaGTTCTTATTGCTAATACAG +
Preference number: 4 (lower is better)
Translates to: SWTPVPAGVTHGSPDRRYEILGL*FLLLIQ
Trigger: CTGTATTAGCAATAAGAAGCAAAGCCCCAGAATCTC...GTATCTTCTGTCCGGAGACCCATGAGTGACCCCAGCTGGAACCGGCGTCCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497580.5
CDS-3UTR CCA 90 bp GTTCCAGCTGGGGTCACTCATGGGTCTCCGGACAGAAGATACTATATCAGAGCTTACTTTTTCCTGGCTTaGCCGGGGGTAGGTTTGCCA +
Preference number: 4 (lower is better)
Translates to: VPAGVTHGSPDRRYYIRAYFFLA*PGVGLP
Trigger: TGGCAAACCTACCCCCGGCCAAGCCAGGAAAAAGTA...AGCTCTGATATAGTATCTTCTGTCCGGAGACCCATGAGTGACCCCAGCTGGAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR CCA 90 bp ACTCTGACTGAGAAGGAGGAGAGGTCAGCTGGTGGGCACCGTGAGTTATTTCATGGTCCATTAGCATATTaGTGCGGCTTCTGCTCCGAG +
Preference number: 4 (lower is better)
Translates to: TLTEKEERSAGGHRELFHGPLAY*CGFCSE
Trigger: CTCGGAGCAGAAGCCGCACCAATATGCTAATGGACC...ATGAAATAACTCACGGTGCCCACCAGCTGACCTCTCCTCCTTCTCAGTCAGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR CCA 90 bp ATGCAACTCAGAAAGGAAAGAGCCCAAAGACGAGAGAACCTGCTTGTTAGCTCACACAACACTGAGGCCTaGTGTGCTGGGGCGGGAACT +
Preference number: 4 (lower is better)
Translates to: MQLRKERAQRRENLLVSSHNTEA*CAGAGT
Trigger: AGTTCCCGCCCCAGCACACCAGGCCTCAGTGTTGTG...TGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGCTCTTTCCTTTCTGAGTTGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp TCCTCCGCCAGCTATGGAGTCATGAGCACCCGAACCCATTTCACAGGTGTCACAAGCATAGTGAACCTTTaGCCTTACCACAGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: SSASYGVMSTRTHFTGVTSIVNL*PYHSRS
Trigger: GCTTCTGCTGTGGTAAGGCCAAAGGTTCACTATGCT...TGTGACACCTGTGAAATGGGTTCGGGTGCTCATGACTCCATAGCTGGCGGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR CCA 90 bp GCTTTGGTGTGCCTCCATGGCCAATTTTTCAGGCACCAAAACCCATTCCTGATTGATTGGGGGATCTGGTaGTGGATGCGATGGCCTAGC +
Preference number: 4 (lower is better)
Translates to: ALVCLHGQFFRHQNPFLIDWGIW*WMRWPS
Trigger: GCTAGGCCATCGCATCCACCACCAGATCCCCCAATC...AATCAGGAATGGGTTTTGGTGCCTGAAAAATTGGCCATGGAGGCACACCAAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR CCA 90 bp TCATGGGTCTCCGGACAGAAGATACTATATCAGAGCTCCTGCTTCGAACTAGTCGATTGGGGGATCTGGTaGTGGATGCGATGGCCTAGC +
Preference number: 4 (lower is better)
Translates to: SWVSGQKILYQSSCFELVDWGIW*WMRWPS
Trigger: GCTAGGCCATCGCATCCACCACCAGATCCCCCAATC...GACTAGTTCGAAGCAGGAGCTCTGATATAGTATCTTCTGTCCGGAGACCCATGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR CCA 90 bp TCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCTGATTGACGCCGGTTCCAGCTaGGGTCACTCATGGGTCTCC +
Preference number: 4 (lower is better)
Translates to: SSAFKAADAPSQRSVCLIDAGSS*GHSWVS
Trigger: GGAGACCCATGAGTGACCCCAGCTGGAACCGGCGTC...AATCAGACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp TGCCTTAGCATTCATCTGAGTGGAACCACTTTCTACACCCTCAAAGTAGCTAGAGACGCCGGTTCCAGCTaGGGTCACTCATGGGTCTCC +
Preference number: 4 (lower is better)
Translates to: CLSIHLSGTTFYTLKVARDAGSS*GHSWVS
Trigger: GGAGACCCATGAGTGACCCCAGCTGGAACCGGCGTC...TCTAGCTACTTTGAGGGTGTAGAAAGTGGTTCCACTCAGATGAATGCTAAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497580.5
CDS-3UTR CCA 90 bp GCTTTGGTGTGCCTCCATGGCCAATTTTTCAGGCACCAAAACCCATTCCTGATTTCGCTCTTCATTTCCTaGACGCCGGTTCCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: ALVCLHGQFFRHQNPFLISLFIS*TPVPAG
Trigger: CCCAGCTGGAACCGGCGTCCAGGAAATGAAGAGCGA...AATCAGGAATGGGTTTTGGTGCCTGAAAAATTGGCCATGGAGGCACACCAAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR CCA 90 bp GATGCACCTTCTCAGAGATCTGTTTGTCTGATTAACAGTCTGCTGCCTTGGTGGGGAGAGGTCAGCTGGTaGGCACTAGAAGACAGCTGG +
Preference number: 4 (lower is better)
Translates to: DAPSQRSVCLINSLLPWWGEVSW*ALEDSW
Trigger: CCAGCTGTCTTCTAGTGCCCACCAGCTGACCTCTCC...CCACCAAGGCAGCAGACTGTTAATCAGACAAACAGATCTCTGAGAAGGTGCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394105.6
CDS-3UTR TCA 90 bp AGTTCTCGCTCTTCATTTCCTGGACGCCGGTTCCAGCTGGGGTCACTCATGGGTCTTGAACTTTTTGCCTaGATCTATCTGAGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: SSRSSFPGRRFQLGSLMGLELFA*IYLSPS
Trigger: AGAAGGGCTCAGATAGATTCAGGCAAAAAGTTCAAG...ACCCATGAGTGACCCCAGCTGGAACCGGCGTCCAGGAAATGAAGAGCGAGAACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR TCA 90 bp ATGCAACTCAGAAAGGAAAGAGCCCAAAGACGAGAGAACCTGCTTGTTAGCTCACAGTACACATTGCCCTaGCCTCCCCAACTTCCAGCC +
Preference number: 4 (lower is better)
Translates to: MQLRKERAQRRENLLVSSQYTLP*PPQLPA
Trigger: GGCTGGAAGTTGGGGAGGTCAGGGCAATGTGTACTG...TGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGCTCTTTCCTTTCTGAGTTGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp GGAGCTCTGTCTGGGATTTCTGCAGTATATTATTTCGGAGGAGAAGAACCACCACAGTACACATTGCCCTaGCCTCCCCAACTTCCAGCC +
Preference number: 4 (lower is better)
Translates to: GALSGISAVYYFGGEEPPQYTLP*PPQLPA
Trigger: GGCTGGAAGTTGGGGAGGTCAGGGCAATGTGTACTG...TGGTGGTTCTTCTCCTCCGAAATAATATACTGCAGAAATCCCAGACAGAGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR TCA 90 bp CACCACTATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCATGCCGGACACAACACTaGGGCCTGGTGTGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: HHYSNPQCNSYLLSIRCSCRTQH*GLVCWG
Trigger: GCCCCAGCACACCAGGCCTCAGTGTTGTGTCCGGCA...TGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATAGTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp TCCTCCGCCAGCTATGGAGTCATGAGCACCCGAACCCATTTCACAGGTGTCACATATCGTCAGCTGCGGTaGGTTTCTGAAAGTCTTGAA +
Preference number: 4 (lower is better)
Translates to: SSASYGVMSTRTHFTGVTYRQLR*VSESLE
Trigger: TTCAAGACTTTCAGAAACTCACCGCAGCTGACGATA...TGTGACACCTGTGAAATGGGTTCGGGTGCTCATGACTCCATAGCTGGCGGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR TCA 90 bp TCCTCCGCCAGCTATGGAGTCATGAGCACCCGAACCCATTTCACAGGTGTCACACACCAATTGAGGAAGTaGACCCCACTACACTTCTAT +
Preference number: 4 (lower is better)
Translates to: SSASYGVMSTRTHFTGVTHQLRK*TPLHFY
Trigger: ATAGAAGTGTAGTGGGGTTCACTTCCTCAATTGGTG...TGTGACACCTGTGAAATGGGTTCGGGTGCTCATGACTCCATAGCTGGCGGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR GCA 90 bp TCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCTGATTTGGAGGGGTCTCCACTaGACGGCCCCCAATCACAAC +
Preference number: 4 (lower is better)
Translates to: SSAFKAADAPSQRSVCLIWRGLH*TAPNHN
Trigger: GTTGTGATTGGGGGCCGTGCAGTGGAGACCCCTCCA...AATCAGACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp CGGTTCCAGCTGGGGTCACTCATGGGTCTCCGGACAGAAGATACTATATCAGAGCTTCAACTCCATTACTaGCAGAAGGTCCTGCTCCAA +
Preference number: 4 (lower is better)
Translates to: RFQLGSLMGLRTEDTISELQLHY*QKVLLQ
Trigger: TTGGAGCAGGACCTTCTGGCAGTAATGGAGTTGAAG...CTCTGATATAGTATCTTCTGTCCGGAGACCCATGAGTGACCCCAGCTGGAACCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR GCA 90 bp GGTCACTCATGGGTCTCCGGACAGAAGATACTATATCAGAGCTCCTGCTTCGAAACGCTCTCCAGTTCTTaGAGACGCTCCTCCTGCTTT +
Preference number: 4 (lower is better)
Translates to: GHSWVSGQKILYQSSCFETLSSS*RRSSCF
Trigger: AAAGCAGGAGGAGCGTCTGCAAGAACTGGAGAGCGT...TTCGAAGCAGGAGCTCTGATATAGTATCTTCTGTCCGGAGACCCATGAGTGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265956.8
CDS-3UTR GCA 90 bp GAGACTCTGACTGAGAAGGAGGAGAGGTCAGCTGGTGGGCACCGTGAGTTATTTCCCCAAAATCAGAGCTaGACTCAGATCTCAGGTCTT +
Preference number: 4 (lower is better)
Translates to: ETLTEKEERSAGGHRELFPQNQS*TQISGL
Trigger: AAGACCTGAGATCTGAGTGCAGCTCTGATTTTGGGG...AAATAACTCACGGTGCCCACCAGCTGACCTCTCCTCCTTCTCAGTCAGAGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR GCA 90 bp TCCTCCGCCAGCTATGGAGTCATGAGCACCCGAACCCATTTCACAGGTGTCACAATGCCTTTGCTTGAATaGCTCCATTTCAGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: SSASYGVMSTRTHFTGVTMPLLE*LHFSWS
Trigger: ACTCCAGCTGAAATGGAGGCATTCAAGCAAAGGCAT...TGTGACACCTGTGAAATGGGTTCGGGTGCTCATGACTCCATAGCTGGCGGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR GCA 90 bp GATGCACCTTCTCAGAGATCTGTTTGTCTGATTAACAGTCTGCTGCCTTGGTGGAGTAGCACCAATGGCTaGAGCTGGAGGGAGTTCTCG +
Preference number: 4 (lower is better)
Translates to: DAPSQRSVCLINSLLPWWSSTNG*SWREFS
Trigger: CGAGAACTCCCTCCAGCTGCAGCCATTGGTGCTACT...CCACCAAGGCAGCAGACTGTTAATCAGACAAACAGATCTCTGAGAAGGTGCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp GCTTTGGTGTGCCTCCATGGCCAATTTTTCAGGCACCAAAACCCATTCCTGATTAGTAGCACCAATGGCTaGAGCTGGAGGGAGTTCTCG +
Preference number: 4 (lower is better)
Translates to: ALVCLHGQFFRHQNPFLISSTNG*SWREFS
Trigger: CGAGAACTCCCTCCAGCTGCAGCCATTGGTGCTACT...AATCAGGAATGGGTTTTGGTGCCTGAAAAATTGGCCATGGAGGCACACCAAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR GCA 90 bp GGAGCTCTGTCTGGGATTTCTGCAGTATATTATTTCGGAGGAGAAGAACCACCAAGCCACCTGAGCTTGTaGACTGAGTCTAGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: GALSGISAVYYFGGEEPPSHLSL*TESRAG
Trigger: CCCAGCCCTAGACTCAGTGCACAAGCTCAGGTGGCT...TGGTGGTTCTTCTCCTCCGAAATAATATACTGCAGAAATCCCAGACAGAGCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR GCA 90 bp ACACACGAAGTGAAACCAGACAGTGATGGCCCATGTACAAGACTTGTGCTTGAAGCAACAGCTGTGCTGTaGTCCTCCGCCAGCTATGGA +
Preference number: 4 (lower is better)
Translates to: THEVKPDSDGPCTRLVLEATAVL*SSASYG
Trigger: TCCATAGCTGGCGGAGGAGCACAGCACAGCTGTTGC...TTCAAGCACAAGTCTTGTACATGGGCCATCACTGTCTGGTTTCACTTCGTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR GCA 90 bp GATGCACCTTCTCAGAGATCTGTTTGTCTGATTAACAGTCTGCTGCCTTGGTGGAACCTTAGCTGCCCCTaGAACAGCTGTGCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: DAPSQRSVCLINSLLPWWNLSCP*NSCAVL
Trigger: GAGCACAGCACAGCTGTTGCAGGGGCAGCTAAGGTT...CCACCAAGGCAGCAGACTGTTAATCAGACAAACAGATCTCTGAGAAGGTGCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR CCA 90 bp GGTCACTCATGGGTCTCCGGACAGAAGATACTATATCAGAGCTCCTGCTTCGAAGGTCCATTAGCATATTaGTGCGGCTTCTGCTCCGAG +
Preference number: 4 (lower is better)
Translates to: GHSWVSGQKILYQSSCFEGPLAY*CGFCSE
Trigger: CTCGGAGCAGAAGCCGCACCAATATGCTAATGGACC...TTCGAAGCAGGAGCTCTGATATAGTATCTTCTGTCCGGAGACCCATGAGTGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR CCA 90 bp CTGCACTCAGATCTCAGGTCTTCAATCTTATTGGGAATATCCTCAGAGGTTGCACACAACACTGAGGCCTaGTGTGCTGGGGCGGGAACT +
Preference number: 4 (lower is better)
Translates to: LHSDLRSSILLGISSEVAHNTEA*CAGAGT
Trigger: AGTTCCCGCCCCAGCACACCAGGCCTCAGTGTTGTG...TGCAACCTCTGAGGATATTCCCAATAAGATTGAAGACCTGAGATCTGAGTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265956.8
CDS-3UTR CCA 90 bp TCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCTGATTCACAACACTGAGGCCTaGTGTGCTGGGGCGGGAACT +
Preference number: 4 (lower is better)
Translates to: SSAFKAADAPSQRSVCLIHNTEA*CAGAGT
Trigger: AGTTCCCGCCCCAGCACACCAGGCCTCAGTGTTGTG...AATCAGACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp GGGTCACTCATGGGTCTCCGGACAGAAGATACTATATCAGAGCTCCTGCTTCGATGGTGGTGGATGCGATaGCCTAGCATAGTGAACCTT +
Preference number: 4 (lower is better)
Translates to: GSLMGLRTEDTISELLLRWWWMR*PSIVNL
Trigger: AAGGTTCACTATGCTAGGCCATCGCATCCACCACCA...TCGAAGCAGGAGCTCTGATATAGTATCTTCTGTCCGGAGACCCATGAGTGACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR CCA 90 bp GATGCACCTTCTCAGAGATCTGTTTGTCTGATTAACAGTCTGCTGCCTTGGTGGTGGGGGATCTGGTGGTaGATGCGATGGCCTAGCATA +
Preference number: 4 (lower is better)
Translates to: DAPSQRSVCLINSLLPWWWGIWW*MRWPSI
Trigger: TATGCTAGGCCATCGCATCCACCACCAGATCCCCCA...CCACCAAGGCAGCAGACTGTTAATCAGACAAACAGATCTCTGAGAAGGTGCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp CGTTCTTCAGTCTCTCCTCTTGAGGAGTCCTTACTCGGGGATGAAGATGATGAATGGGGGATCTGGTGGTaGATGCGATGGCCTAGCATA +
Preference number: 4 (lower is better)
Translates to: RSSVSPLEESLLGDEDDEWGIWW*MRWPSI
Trigger: TATGCTAGGCCATCGCATCCACCACCAGATCCCCCA...TTCATCATCTTCATCCCCGAGTAAGGACTCCTCAAGAGGAGAGACTGAAGAACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR CCA 90 bp ATGCAACTCAGAAAGGAAAGAGCCCAAAGACGAGAGAACCTGCTTGTTAGCTCAGATTGGGGGATCTGGTaGTGGATGCGATGGCCTAGC +
Preference number: 4 (lower is better)
Translates to: MQLRKERAQRRENLLVSSDWGIW*WMRWPS
Trigger: GCTAGGCCATCGCATCCACCACCAGATCCCCCAATC...TGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGCTCTTTCCTTTCTGAGTTGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp ACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTGACGCCGGTTCCAGCTaGGGTCACTCATGGGTCTCC +
Preference number: 4 (lower is better)
Translates to: TKQSSAFKAADAPSQRSVDAGSS*GHSWVS
Trigger: GGAGACCCATGAGTGACCCCAGCTGGAACCGGCGTC...AACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp ATGTCATGTATGGTAATCAGTCTATCTCCTAATGCAGGCTCACAAACTTCCACGGACGCCGGTTCCAGCTaGGGTCACTCATGGGTCTCC +
Preference number: 4 (lower is better)
Translates to: MSCMVISLSPNAGSQTSTDAGSS*GHSWVS
Trigger: GGAGACCCATGAGTGACCCCAGCTGGAACCGGCGTC...CGTGGAAGTTTGTGAGCCTGCATTAGGAGATAGACTGATTACCATACATGACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR CCA 90 bp CTGGAGTTAAAACATGGGAACCAAAGTTTGGCAACCTGGCCTCATTTCCTCCCAACCAATGGCTGCAGCTaGAGGGAGTTCTCGCTCTTC +
Preference number: 4 (lower is better)
Translates to: LELKHGNQSLATWPHFLPTNGCS*REFSLF
Trigger: GAAGAGCGAGAACTCCCTCCAGCTGCAGCCATTGGT...TGGGAGGAAATGAGGCCAGGTTGCCAAACTTTGGTTCCCATGTTTTAACTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR CCA 90 bp TCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCTGATTGCTGAATCCTGCGGGTaGGCTGCTTGGCTTGCAGAG +
Preference number: 4 (lower is better)
Translates to: SSAFKAADAPSQRSVCLIAESCG*AAWLAE
Trigger: CTCTGCAAGCCAAGCAGCCCACCCGCAGGATTCAGC...AATCAGACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp GCTTTGGTGTGCCTCCATGGCCAATTTTTCAGGCACCAAAACCCATTCCTGATTTGCCTTGGTGGGCCTTaGTCTTGGTCACTTTCGGTC +
Preference number: 4 (lower is better)
Translates to: ALVCLHGQFFRHQNPFLICLGGP*SWSLSV
Trigger: GACCGAAAGTGACCAAGACCAAGGCCCACCAAGGCA...AATCAGGAATGGGTTTTGGTGCCTGAAAAATTGGCCATGGAGGCACACCAAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR CCA 90 bp GATGCACCTTCTCAGAGATCTGTTTGTCTGATTAACAGTCTGCTGCCTTGGTGGTGCCTTGGTGGGCCTTaGTCTTGGTCACTTTCGGTC +
Preference number: 4 (lower is better)
Translates to: DAPSQRSVCLINSLLPWWCLGGP*SWSLSV
Trigger: GACCGAAAGTGACCAAGACCAAGGCCCACCAAGGCA...CCACCAAGGCAGCAGACTGTTAATCAGACAAACAGATCTCTGAGAAGGTGCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp GCTTTGGTGTGCCTCCATGGCCAATTTTTCAGGCACCAAAACCCATTCCTGATTAACAGTCTGCTGCCTTaGTGGGCCTTGGTCTTGGTC +
Preference number: 4 (lower is better)
Translates to: ALVCLHGQFFRHQNPFLINSLLP*WALVLV
Trigger: GACCAAGACCAAGGCCCACCAAGGCAGCAGACTGTT...AATCAGGAATGGGTTTTGGTGCCTGAAAAATTGGCCATGGAGGCACACCAAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR CCA 90 bp TCCTCCGCCAGCTATGGAGTCATGAGCACCCGAACCCATTTCACAGGTGTCACACAGAAATCACACAGCTaGCCTCGTGATGTATTTACG +
Preference number: 4 (lower is better)
Translates to: SSASYGVMSTRTHFTGVTQKSHS*PRDVFT
Trigger: CGTAAATACATCACGAGGCCAGCTGTGTGATTTCTG...TGTGACACCTGTGAAATGGGTTCGGGTGCTCATGACTCCATAGCTGGCGGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR CCA 90 bp ACACACGAAGTGAAACCAGACAGTGATGGCCCATGTACAAGACTTGTGCTTGAACTCCTCCGCCAGCTATaGAGTCATGAGCACCCGAAC +
Preference number: 4 (lower is better)
Translates to: THEVKPDSDGPCTRLVLELLRQL*SHEHPN
Trigger: GTTCGGGTGCTCATGACTCCATAGCTGGCGGAGGAG...TTCAAGCACAAGTCTTGTACATGGGCCATCACTGTCTGGTTTCACTTCGTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR CCA 90 bp ATGCAACTCAGAAAGGAAAGAGCCCAAAGACGAGAGAACCTGCTTGTTAGCTCAGGAGGAGAGGTCAGCTaGTGGGCACTAGAAGACAGC +
Preference number: 4 (lower is better)
Translates to: MQLRKERAQRRENLLVSSGGEVS*WALEDS
Trigger: GCTGTCTTCTAGTGCCCACCAGCTGACCTCTCCTCC...TGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGCTCTTTCCTTTCTGAGTTGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394105.6
CDS-3UTR TCA 90 bp TCCTCCGCCAGCTATGGAGTCATGAGCACCCGAACCCATTTCACAGGTGTCACACTTGAACTTTTTGCCTaGATCTATCTGAGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: SSASYGVMSTRTHFTGVTLELFA*IYLSPS
Trigger: AGAAGGGCTCAGATAGATTCAGGCAAAAAGTTCAAG...TGTGACACCTGTGAAATGGGTTCGGGTGCTCATGACTCCATAGCTGGCGGAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR TCA 90 bp TCACCTGCTCCAAGATCTTCTCCTGATACCACTACCATTTTGGCTAAGTTAGGTCAGTACACATTGCCCTaGCCTCCCCAACTTCCAGCC +
Preference number: 4 (lower is better)
Translates to: SPAPRSSPDTTTILAKLGQYTLP*PPQLPA
Trigger: GGCTGGAAGTTGGGGAGGTCAGGGCAATGTGTACTG...ACCTAACTTAGCCAAAATGGTAGTGGTATCAGGAGAAGATCTTGGAGCAGGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394084.5
CDS-3UTR TCA 90 bp CAGTGTCTATCACAGTGCCTCATGTGCAAGACACATCCACTCTCACAGGACTTCATCCTTCCAGAAGATTaGCGGAAGACAATGGAGGGG +
Preference number: 4 (lower is better)
Translates to: QCLSQCLMCKTHPLSQDFILPED*RKTMEG
Trigger: CCCCTCCATTGTCTTCCGTCAATCTTCTGGAAGGAT...GAAGTCCTGTGAGAGTGGATGTGTCTTGCACATGAGGCACTGTGATAGACACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394084.5
CDS-3UTR TCA 90 bp GGTCACTCATGGGTCTCCGGACAGAAGATACTATATCAGAGCTCCTGCTTCGAAATCCTTCCAGAAGATTaGCGGAAGACAATGGAGGGG +
Preference number: 4 (lower is better)
Translates to: GHSWVSGQKILYQSSCFEILPED*RKTMEG
Trigger: CCCCTCCATTGTCTTCCGTCAATCTTCTGGAAGGAT...TTCGAAGCAGGAGCTCTGATATAGTATCTTCTGTCCGGAGACCCATGAGTGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR TCA 90 bp CGGTTCCAGCTGGGGTCACTCATGGGTCTCCGGACAGAAGATACTATATCAGAGCTATCTTCTCTCAGTTaGTCTCCAGACATCACACTC +
Preference number: 4 (lower is better)
Translates to: RFQLGSLMGLRTEDTISELSSLS*SPDITL
Trigger: GAGTGTGATGTCTGGAGATCAACTGAGAGAAGATAG...CTCTGATATAGTATCTTCTGTCCGGAGACCCATGAGTGACCCCAGCTGGAACCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR TCA 90 bp GATGCACCTTCTCAGAGATCTGTTTGTCTGATTAACAGTCTGCTGCCTTGGTGGTTCAGTCTCTCCTCTTaGGGAGTCCTTACTCGGGGA +
Preference number: 4 (lower is better)
Translates to: DAPSQRSVCLINSLLPWWFSLSS*GVLTRG
Trigger: TCCCCGAGTAAGGACTCCTCAAGAGGAGAGACTGAA...CCACCAAGGCAGCAGACTGTTAATCAGACAAACAGATCTCTGAGAAGGTGCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp CGTTCTTCAGTCTCTCCTCTTGAGGAGTCCTTACTCGGGGATGAAGATGATGAATTCAGTCTCTCCTCTTaGGGAGTCCTTACTCGGGGA +
Preference number: 4 (lower is better)
Translates to: RSSVSPLEESLLGDEDDEFSLSS*GVLTRG
Trigger: TCCCCGAGTAAGGACTCCTCAAGAGGAGAGACTGAA...TTCATCATCTTCATCCCCGAGTAAGGACTCCTCAAGAGGAGAGACTGAAGAACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR TCA 90 bp TCCTCCGCCAGCTATGGAGTCATGAGCACCCGAACCCATTTCACAGGTGTCACAAGCTTTAGGCATGGCTaGAACAAAACGTTTTCTCCA +
Preference number: 4 (lower is better)
Translates to: SSASYGVMSTRTHFTGVTSFRHG*NKTFSP
Trigger: TGGAGAAAACGTTTTGTTTCAGCCATGCCTAAAGCT...TGTGACACCTGTGAAATGGGTTCGGGTGCTCATGACTCCATAGCTGGCGGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297933.11
CDS-3UTR TCA 90 bp ACACACGAAGTGAAACCAGACAGTGATGGCCCATGTACAAGACTTGTGCTTGAATCTGTAAGAGAAAGCTaGATCCTGCGGGTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: THEVKPDSDGPCTRLVLESVRES*ILRVGC
Trigger: GCAGCCCACCCGCAGGATTCAGCTTTCTCTTACAGA...TTCAAGCACAAGTCTTGTACATGGGCCATCACTGTCTGGTTTCACTTCGTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR TCA 90 bp GATGCACCTTCTCAGAGATCTGTTTGTCTGATTAACAGTCTGCTGCCTTGGTGGTCGCGTTTTGCCATATaGCATCCTGGGCCATTGCAC +
Preference number: 4 (lower is better)
Translates to: DAPSQRSVCLINSLLPWWSRFAI*HPGPLH
Trigger: GTGCAATGGCCCAGGATGTCATATGGCAAAACGCGA...CCACCAAGGCAGCAGACTGTTAATCAGACAAACAGATCTCTGAGAAGGTGCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp ATGCAACTCAGAAAGGAAAGAGCCCAAAGACGAGAGAACCTGCTTGTTAGCTCAGCCAGCTGTGCATCTTaGAGCTGTTCTTCACTCGCG +
Preference number: 4 (lower is better)
Translates to: MQLRKERAQRRENLLVSSASCAS*SCSSLA
Trigger: CGCGAGTGAAGAACAGCTTCAAGATGCACAGCTGGC...TGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGCTCTTTCCTTTCTGAGTTGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp ACACACGAAGTGAAACCAGACAGTGATGGCCCATGTACAAGACTTGTGCTTGAAGCCAGCTGTGCATCTTaGAGCTGTTCTTCACTCGCG +
Preference number: 4 (lower is better)
Translates to: THEVKPDSDGPCTRLVLEASCAS*SCSSLA
Trigger: CGCGAGTGAAGAACAGCTTCAAGATGCACAGCTGGC...TTCAAGCACAAGTCTTGTACATGGGCCATCACTGTCTGGTTTCACTTCGTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR TCA 90 bp GCTTTGGTGTGCCTCCATGGCCAATTTTTCAGGCACCAAAACCCATTCCTGATTGGTAGAAGGCGAGCTTaGAAATCCGGTTCATCACGC +
Preference number: 4 (lower is better)
Translates to: ALVCLHGQFFRHQNPFLIGRRRA*KSGSSR
Trigger: GCGTGATGAACCGGATTTTCAAGCTCGCCTTCTACC...AATCAGGAATGGGTTTTGGTGCCTGAAAAATTGGCCATGGAGGCACACCAAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR TCA 90 bp GATGCACCTTCTCAGAGATCTGTTTGTCTGATTAACAGTCTGCTGCCTTGGTGGGGTAGAAGGCGAGCTTaGAAATCCGGTTCATCACGC +
Preference number: 4 (lower is better)
Translates to: DAPSQRSVCLINSLLPWWGRRRA*KSGSSR
Trigger: GCGTGATGAACCGGATTTTCAAGCTCGCCTTCTACC...CCACCAAGGCAGCAGACTGTTAATCAGACAAACAGATCTCTGAGAAGGTGCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp TGTATCCAGTGTCTATCACAGTGCCTCATGTGCAAGACACATCCACTCTCACAGCCAGTCATTGCTAACTaGTGCAAAAGGCGGCCTACC +
Preference number: 4 (lower is better)
Translates to: CIQCLSQCLMCKTHPLSQPVIAN*CKRRPT
Trigger: GGTAGGCCGCCTTTTGCAGCAGTTAGCAATGACTGG...CTGTGAGAGTGGATGTGTCTTGCACATGAGGCACTGTGATAGACACTGGATACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394084.5
CDS-3UTR GCA 90 bp GTCTCCGGACAGAAGATACTATATCAGAGCTCCTGCTTCGAACTAGTCTCTCAGCCAGTCATTGCTAACTaGTGCAAAAGGCGGCCTACC +
Preference number: 4 (lower is better)
Translates to: VSGQKILYQSSCFELVSQPVIAN*CKRRPT
Trigger: GGTAGGCCGCCTTTTGCAGCAGTTAGCAATGACTGG...CTGAGAGACTAGTTCGAAGCAGGAGCTCTGATATAGTATCTTCTGTCCGGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR GCA 90 bp ACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGGAGGGGTCTCCACTaGACGGCCCCCAATCACAAC +
Preference number: 4 (lower is better)
Translates to: TKQSSAFKAADAPSQRSVWRGLH*TAPNHN
Trigger: GTTGTGATTGGGGGCCGTGCAGTGGAGACCCCTCCA...AACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp AAGGGTACTAGTCTCTTCTTGCTCTCCCTAACTAAACTATCAACAGCCAACTTGTGGAGGGGTCTCCACTaGACGGCCCCCAATCACAAC +
Preference number: 4 (lower is better)
Translates to: KGTSLFLLSLTKLSTANLWRGLH*TAPNHN
Trigger: GTTGTGATTGGGGGCCGTGCAGTGGAGACCCCTCCA...CAAGTTGGCTGTTGATAGTTTAGTTAGGGAGAGCAAGAAGAGACTAGTACCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394084.5
CDS-3UTR GCA 90 bp AGAGGTCAGCTGGTGGGCACCGTGAGTTATTTCATCCATGTCTGGACTAGTGACCTTCCAGATTATCACTaGAGAGGGAAAAGCGCAAGG +
Preference number: 4 (lower is better)
Translates to: RGQLVGTVSYFIHVWTSDLPDYH*RGKSAR
Trigger: CCTTGCGCTTTTCCCTCTGCAGTGATAATCTGGAAG...GTCACTAGTCCAGACATGGATGAAATAACTCACGGTGCCCACCAGCTGACCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR GCA 90 bp GCAGAGACTCTGACTGAGAAGGAGGAGAGGTCAGCTGGTGGGCACCGTGAGTTATTGCTTCGCAATCCATaGTGTACGATACAACTTTTC +
Preference number: 4 (lower is better)
Translates to: AETLTEKEERSAGGHRELLLRNP*CTIQLF
Trigger: GAAAAGTTGTATCGTACAGCATGGATTGCGAAGCAA...TAACTCACGGTGCCCACCAGCTGACCTCTCCTCCTTCTCAGTCAGAGTCTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497580.5
CDS-3UTR GCA 90 bp GATGCACCTTCTCAGAGATCTGTTTGTCTGATTAACAGTCTGCTGCCTTGGTGGCGAGATGTTCTGCAGTaGTTCGTCACGGGGAGAATC +
Preference number: 4 (lower is better)
Translates to: DAPSQRSVCLINSLLPWWRDVLQ*FVTGRI
Trigger: GATTCTCCCCGTGACGAAGCACTGCAGAACATCTCG...CCACCAAGGCAGCAGACTGTTAATCAGACAAACAGATCTCTGAGAAGGTGCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp GGAGCTCTGTCTGGGATTTCTGCAGTATATTATTTCGGAGGAGAAGAACCACCATCAGCCGAGATGTTCTaGAGTGCTTCGTCACGGGGA +
Preference number: 4 (lower is better)
Translates to: GALSGISAVYYFGGEEPPSAEMF*SASSRG
Trigger: TCCCCGTGACGAAGCACTGCAGAACATCTCGGCTGA...TGGTGGTTCTTCTCCTCCGAAATAATATACTGCAGAAATCCCAGACAGAGCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR GCA 90 bp ATGCAACTCAGAAAGGAAAGAGCCCAAAGACGAGAGAACCTGCTTGTTAGCTCAGAGAAAGCTGAATCCTaGGGGTGGGCTGCTTGGCTT +
Preference number: 4 (lower is better)
Translates to: MQLRKERAQRRENLLVSSEKAES*GWAAWL
Trigger: AAGCCAAGCAGCCCACCCGCAGGATTCAGCTTTCTC...TGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGCTCTTTCCTTTCTGAGTTGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp GATGCACCTTCTCAGAGATCTGTTTGTCTGATTAACAGTCTGCTGCCTTGGTGGAGCACATTCTCAGGATaGACTGCACTTTGTCCCGGG +
Preference number: 4 (lower is better)
Translates to: DAPSQRSVCLINSLLPWWSTFSG*TALCPG
Trigger: CCCGGGACAAAGTGCAGTGCATCCTGAGAATGTGCT...CCACCAAGGCAGCAGACTGTTAATCAGACAAACAGATCTCTGAGAAGGTGCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp GCCCCCGTATTGGGGCTGAGATTGTTCTCTTGCTCACGCACCTCAGGGACACATAGATCTGCTTTAAAATaGCTGATGCTGTGCAGTATC +
Preference number: 4 (lower is better)
Translates to: APVLGLRLFSCSRTSGTHRSALK*LMLCSI
Trigger: GATACTGCACAGCATCAGGCATTTTAAAGCAGATCT...ATGTGTCCCTGAGGTGCGTGAGCAAGAGAACAATCTCAGCCCCAATACGGGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR GCA 90 bp ATGCAACTCAGAAAGGAAAGAGCCCAAAGACGAGAGAACCTGCTTGTTAGCTCAGCCTCCGTGTTCATCTaGCCGAGGCTGTTTGTCACA +
Preference number: 4 (lower is better)
Translates to: MQLRKERAQRRENLLVSSASVFI*PRLFVT
Trigger: TGTGACAAACAGCCTCGGGCAGATGAACACGGAGGC...TGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGCTCTTTCCTTTCTGAGTTGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR CCA 90 bp GCAGAGACTCTGACTGAGAAGGAGGAGAGGTCAGCTGGTGGGCACCGTGAGTTACTAGCTTTGCTTCATTaGACTCCACCATTTCTTGAA +
Preference number: 4 (lower is better)
Translates to: AETLTEKEERSAGGHRELLALLH*TPPFLE
Trigger: TTCAAGAAATGGTGGAGTCCAATGAAGCAAAGCTAG...TAACTCACGGTGCCCACCAGCTGACCTCTCCTCCTTCTCAGTCAGAGTCTCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR CCA 90 bp GATGCACCTTCTCAGAGATCTGTTTGTCTGATTAACAGTCTGCTGCCTTGGTGGATTGACGGAAGACAATaGAGGGGTCTCCACTGCACG +
Preference number: 4 (lower is better)
Translates to: DAPSQRSVCLINSLLPWWIDGRQ*RGLHCT
Trigger: CGTGCAGTGGAGACCCCTCCATTGTCTTCCGTCAAT...CCACCAAGGCAGCAGACTGTTAATCAGACAAACAGATCTCTGAGAAGGTGCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp GATGCACCTTCTCAGAGATCTGTTTGTCTGATTAACAGTCTGCTGCCTTGGTGGTACTTTTTCCTGGCTTaGCCGGGGGTAGGTTTGCCA +
Preference number: 4 (lower is better)
Translates to: DAPSQRSVCLINSLLPWWYFFLA*PGVGLP
Trigger: TGGCAAACCTACCCCCGGCCAAGCCAGGAAAAAGTA...CCACCAAGGCAGCAGACTGTTAATCAGACAAACAGATCTCTGAGAAGGTGCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp ACCAAGGTCTGTTCCTGTCTGATTTCTCATCATCGCTATCTTTGCGTTCTTCAGGATTGGGGGATCTGGTaGTGGATGCGATGGCCTAGC +
Preference number: 4 (lower is better)
Translates to: TKVCSCLISHHRYLCVLQDWGIW*WMRWPS
Trigger: GCTAGGCCATCGCATCCACCACCAGATCCCCCAATC...CTGAAGAACGCAAAGATAGCGATGATGAGAAATCAGACAGGAACAGACCTTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR CCA 90 bp TCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCTGATTCAGGATTGGGGGATCTaGTGGTGGATGCGATGGCCT +
Preference number: 4 (lower is better)
Translates to: SSAFKAADAPSQRSVCLIQDWGI*WWMRWP
Trigger: AGGCCATCGCATCCACCACCAGATCCCCCAATCCTG...AATCAGACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp CTGCACTCAGATCTCAGGTCTTCAATCTTATTGGGAATATCCTCAGAGGTTGCATCGCTCTTCATTTCCTaGACGCCGGTTCCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: LHSDLRSSILLGISSEVASLFIS*TPVPAG
Trigger: CCCAGCTGGAACCGGCGTCCAGGAAATGAAGAGCGA...TGCAACCTCTGAGGATATTCCCAATAAGATTGAAGACCTGAGATCTGAGTGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR CCA 90 bp ATGCAACTCAGAAAGGAAAGAGCCCAAAGACGAGAGAACCTGCTTGTTAGCTCAACCAATGGCTGCAGCTaGAGGGAGTTCTCGCTCTTC +
Preference number: 4 (lower is better)
Translates to: MQLRKERAQRRENLLVSSTNGCS*REFSLF
Trigger: GAAGAGCGAGAACTCCCTCCAGCTGCAGCCATTGGT...TGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGCTCTTTCCTTTCTGAGTTGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp GCCCAAAGACGAGAGAACCTGCTTGTTAGCTCATTAACCTGTTTAGTAAAGATCTGCGGGTGGGCTGCTTaGCTTGCAGAGTCTGGGAGA +
Preference number: 4 (lower is better)
Translates to: AQRRENLLVSSLTCLVKICGWAA*LAESGR
Trigger: TCTCCCAGACTCTGCAAGCCAAGCAGCCCACCCGCA...GATCTTTACTAAACAGGTTAATGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp ATGTCATGTATGGTAATCAGTCTATCTCCTAATGCAGGCTCACAAACTTCCACGGCTGAATCCTGCGGGTaGGCTGCTTGGCTTGCAGAG +
Preference number: 4 (lower is better)
Translates to: MSCMVISLSPNAGSQTSTAESCG*AAWLAE
Trigger: CTCTGCAAGCCAAGCAGCCCACCCGCAGGATTCAGC...CGTGGAAGTTTGTGAGCCTGCATTAGGAGATAGACTGATTACCATACATGACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR CCA 90 bp ATGCAACTCAGAAAGGAAAGAGCCCAAAGACGAGAGAACCTGCTTGTTAGCTCAGGACAGAGTCCTCATTaGCCAGGCTCAGGAGGTTCA +
Preference number: 4 (lower is better)
Translates to: MQLRKERAQRRENLLVSSGQSPH*PGSGGS
Trigger: TGAACCTCCTGAGCCTGGCCAATGAGGACTCTGTCC...TGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGCTCTTTCCTTTCTGAGTTGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp ACACACGAAGTGAAACCAGACAGTGATGGCCCATGTACAAGACTTGTGCTTGAATGCCTTGGTGGGCCTTaGTCTTGGTCACTTTCGGTC +
Preference number: 4 (lower is better)
Translates to: THEVKPDSDGPCTRLVLECLGGP*SWSLSV
Trigger: GACCGAAAGTGACCAAGACCAAGGCCCACCAAGGCA...TTCAAGCACAAGTCTTGTACATGGGCCATCACTGTCTGGTTTCACTTCGTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR CCA 90 bp ACACACGAAGTGAAACCAGACAGTGATGGCCCATGTACAAGACTTGTGCTTGAAAGTCTGCTGCCTTGGTaGGCCTTGGTCTTGGTCACT +
Preference number: 4 (lower is better)
Translates to: THEVKPDSDGPCTRLVLESLLPW*ALVLVT
Trigger: AGTGACCAAGACCAAGGCCCACCAAGGCAGCAGACT...TTCAAGCACAAGTCTTGTACATGGGCCATCACTGTCTGGTTTCACTTCGTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR CCA 90 bp ATGCAACTCAGAAAGGAAAGAGCCCAAAGACGAGAGAACCTGCTTGTTAGCTCAAACAGTCTGCTGCCTTaGTGGGCCTTGGTCTTGGTC +
Preference number: 4 (lower is better)
Translates to: MQLRKERAQRRENLLVSSNSLLP*WALVLV
Trigger: GACCAAGACCAAGGCCCACCAAGGCAGCAGACTGTT...TGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGCTCTTTCCTTTCTGAGTTGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp TCCTCCGCCAGCTATGGAGTCATGAGCACCCGAACCCATTTCACAGGTGTCACACCCTTAAAAGATGCCTaGAAATGCTCCCAACAACAA +
Preference number: 4 (lower is better)
Translates to: SSASYGVMSTRTHFTGVTPLKDA*KCSQQQ
Trigger: TTGTTGTTGGGAGCATTTCCAGGCATCTTTTAAGGG...TGTGACACCTGTGAAATGGGTTCGGGTGCTCATGACTCCATAGCTGGCGGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR CCA 90 bp GCTTTGGTGTGCCTCCATGGCCAATTTTTCAGGCACCAAAACCCATTCCTGATTAATTCCCCTAGTGCATaGCCGCTACCCACACTGTCT +
Preference number: 4 (lower is better)
Translates to: ALVCLHGQFFRHQNPFLINSPSA*PLPTLS
Trigger: AGACAGTGTGGGTAGCGGCCATGCACTAGGGGAATT...AATCAGGAATGGGTTTTGGTGCCTGAAAAATTGGCCATGGAGGCACACCAAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR TCA 90 bp GTTCCAGCTGGGGTCACTCATGGGTCTCCGGACAGAAGATACTATATCAGAGCTGGATCTGTTTCCAGGTaGTCTTCATCTTCAACAAGC +
Preference number: 4 (lower is better)
Translates to: VPAGVTHGSPDRRYYIRAGSVSR*SSSSTS
Trigger: GCTTGTTGAAGATGAAGATCACCTGGAAACAGATCC...AGCTCTGATATAGTATCTTCTGTCCGGAGACCCATGAGTGACCCCAGCTGGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR TCA 90 bp GATGCACCTTCTCAGAGATCTGTTTGTCTGATTAACAGTCTGCTGCCTTGGTGGATCCTTCCAGAAGATTaGCGGAAGACAATGGAGGGG +
Preference number: 4 (lower is better)
Translates to: DAPSQRSVCLINSLLPWWILPED*RKTMEG
Trigger: CCCCTCCATTGTCTTCCGTCAATCTTCTGGAAGGAT...CCACCAAGGCAGCAGACTGTTAATCAGACAAACAGATCTCTGAGAAGGTGCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp TCCAGCTGGGGTCACTCATGGGTCTCCGGACAGAAGATACTATATCAGAGCTCCCTCACTCACTGTTTCTaGTATGTCCCTATCATCTGT +
Preference number: 4 (lower is better)
Translates to: SSWGHSWVSGQKILYQSSLTHCF*YVPIIC
Trigger: ACAGATGATAGGGACATATCAGAAACAGTGAGTGAG...GGAGCTCTGATATAGTATCTTCTGTCCGGAGACCCATGAGTGACCCCAGCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR TCA 90 bp TGCTTAACATTTACTGAATCAAAGGCTGAAGTAAATGGACTCTCATCTAGGTCTTGCCGGACACAACACTaGGGCCTGGTGTGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: CLTFTESKAEVNGLSSRSCRTQH*GLVCWG
Trigger: GCCCCAGCACACCAGGCCTCAGTGTTGTGTCCGGCA...AGACCTAGATGAGAGTCCATTTACTTCAGCCTTTGATTCAGTAAATGTTAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR TCA 90 bp TCTCTCCTCTTGAGGAGTCCTTACTCGGGGATGAAGATGATGAATGAGGTGCAGTCTGCATTGAGCCTCTaGATGAGCTGTTTCTCAGAG +
Preference number: 4 (lower is better)
Translates to: SLLLRSPYSGMKMMNEVQSALSL*MSCFSE
Trigger: CTCTGAGAAACAGCTCATTCAGAGGCTCAATGCAGA...CTGCACCTCATTCATCATCTTCATCCCCGAGTAAGGACTCCTCAAGAGGAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497580.5
CDS-3UTR TCA 90 bp GCTTTGGTGTGCCTCCATGGCCAATTTTTCAGGCACCAAAACCCATTCCTGATTATCATCTGTGAGTGTTaGGAATCTGTCAGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: ALVCLHGQFFRHQNPFLIIICEC*ESVRPQ
Trigger: CTGGGGCCTGACAGATTCTCAACACTCACAGATGAT...AATCAGGAATGGGTTTTGGTGCCTGAAAAATTGGCCATGGAGGCACACCAAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000394104.6
CDS-3UTR TCA 90 bp TCCTCCGCCAGCTATGGAGTCATGAGCACCCGAACCCATTTCACAGGTGTCACAAAGCACTTATTGTCCTaGTTTCTGATTGTGCAGATG +
Preference number: 4 (lower is better)
Translates to: SSASYGVMSTRTHFTGVTKHLLS*FLIVQM
Trigger: CATCTGCACAATCAGAAATCAGGACAATAAGTGCTT...TGTGACACCTGTGAAATGGGTTCGGGTGCTCATGACTCCATAGCTGGCGGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR TCA 90 bp TCCTCCGCCAGCTATGGAGTCATGAGCACCCGAACCCATTTCACAGGTGTCACAAACCACCATAAAGTATaGGCTATCCACTGTTCCTTT +
Preference number: 4 (lower is better)
Translates to: SSASYGVMSTRTHFTGVTNHHKV*AIHCSF
Trigger: AAAGGAACAGTGGATAGCTCATACTTTATGGTGGTT...TGTGACACCTGTGAAATGGGTTCGGGTGCTCATGACTCCATAGCTGGCGGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR TCA 90 bp GGAGCTCTGTCTGGGATTTCTGCAGTATATTATTTCGGAGGAGAAGAACCACCAAGCAACCAGGGAGGCTaGGCCATGAGAATCACTAGA +
Preference number: 4 (lower is better)
Translates to: GALSGISAVYYFGGEEPPSNQGG*AMRITR
Trigger: TCTAGTGATTCTCATGGCTCAGCCTCCCTGGTTGCT...TGGTGGTTCTTCTCCTCCGAAATAATATACTGCAGAAATCCCAGACAGAGCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR TCA 90 bp TCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCTGATTCCCCCGTATTGGGGCTaGGATTGTTCTCTTGCTCAC +
Preference number: 4 (lower is better)
Translates to: SSAFKAADAPSQRSVCLIPPYWG*DCSLAH
Trigger: GTGAGCAAGAGAACAATCTCAGCCCCAATACGGGGG...AATCAGACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR GCA 90 bp GAGTTAAAACATGGGAACCAAAGTTTGGCAACCTGGCCTCATTTCCTCCCACAGGAGATCAGTACACATTaGCCTGACCTCCCCAACTTC +
Preference number: 4 (lower is better)
Translates to: ELKHGNQSLATWPHFLPQEISTH*PDLPNF
Trigger: GAAGTTGGGGAGGTCAGGGCAATGTGTACTGATCTC...CTGTGGGAGGAAATGAGGCCAGGTTGCCAAACTTTGGTTCCCATGTTTTAACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR GCA 90 bp GCTTTGGTGTGCCTCCATGGCCAATTTTTCAGGCACCAAAACCCATTCCTGATTGAGATCAGTACACATTaGCCTGACCTCCCCAACTTC +
Preference number: 4 (lower is better)
Translates to: ALVCLHGQFFRHQNPFLIEISTH*PDLPNF
Trigger: GAAGTTGGGGAGGTCAGGGCAATGTGTACTGATCTC...AATCAGGAATGGGTTTTGGTGCCTGAAAAATTGGCCATGGAGGCACACCAAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR GCA 90 bp ATGCAACTCAGAAAGGAAAGAGCCCAAAGACGAGAGAACCTGCTTGTTAGCTCACCAGTCATTGCTAACTaGTGCAAAAGGCGGCCTACC +
Preference number: 4 (lower is better)
Translates to: MQLRKERAQRRENLLVSSPVIAN*CKRRPT
Trigger: GGTAGGCCGCCTTTTGCAGCAGTTAGCAATGACTGG...TGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGCTCTTTCCTTTCTGAGTTGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp ATCATACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATTGGAGGGGTCTCCACTaGACGGCCCCCAATCACAAC +
Preference number: 4 (lower is better)
Translates to: IIQNNLQPSKQLMHLLRDWRGLH*TAPNHN
Trigger: GTTGTGATTGGGGGCCGTGCAGTGGAGACCCCTCCA...ATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGTATGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp GCTTTGGTGTGCCTCCATGGCCAATTTTTCAGGCACCAAAACCCATTCCTGATTCCATTAGCATATTGGTaGGGCTTCTGCTCCGAGTTG +
Preference number: 4 (lower is better)
Translates to: ALVCLHGQFFRHQNPFLIPLAYW*GFCSEL
Trigger: CAACTCGGAGCAGAAGCCGCACCAATATGCTAATGG...AATCAGGAATGGGTTTTGGTGCCTGAAAAATTGGCCATGGAGGCACACCAAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR GCA 90 bp GATGCACCTTCTCAGAGATCTGTTTGTCTGATTAACAGTCTGCTGCCTTGGTGGCTCTGCTGCAGCACCTaGAATTTCTTGCAAGCGATC +
Preference number: 4 (lower is better)
Translates to: DAPSQRSVCLINSLLPWWLCCST*NFLQAI
Trigger: GATCGCTTGCAAGAAATTGCAGGTGCTGCAGCAGAG...CCACCAAGGCAGCAGACTGTTAATCAGACAAACAGATCTCTGAGAAGGTGCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp GCTTTGGTGTGCCTCCATGGCCAATTTTTCAGGCACCAAAACCCATTCCTGATTGGAGGCACAGCAAACTaGCTAACATGTTCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: ALVCLHGQFFRHQNPFLIGGTAN*LTCSLL
Trigger: CAGCAGAGAACATGTTAGGCAGTTTGCTGTGCCTCC...AATCAGGAATGGGTTTTGGTGCCTGAAAAATTGGCCATGGAGGCACACCAAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR GCA 90 bp AAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTTGCAGACGCTCCTCCTaGTTTAGGTCTGGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: KQSSAFKAADAPSQRSVCCRRSS*FRSGAS
Trigger: AGAGGCCCCAGACCTAAAGCAGGAGGAGCGTCTGCA...ACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp ATGTCATGTATGGTAATCAGTCTATCTCCTAATGCAGGCTCACAAACTTCCACGTGCAGACGCTCCTCCTaGTTTAGGTCTGGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: MSCMVISLSPNAGSQTSTCRRSS*FRSGAS
Trigger: AGAGGCCCCAGACCTAAAGCAGGAGGAGCGTCTGCA...CGTGGAAGTTTGTGAGCCTGCATTAGGAGATAGACTGATTACCATACATGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR GCA 90 bp ACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGCAGACGCTCCTCCTaGTTTAGGTCTGGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: TKQSSAFKAADAPSQRSVCRRSS*FRSGAS
Trigger: AGAGGCCCCAGACCTAAAGCAGGAGGAGCGTCTGCA...AACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp ACCGTGAGTTATTTCATCCATGTCTGGACTAGTGACAGAATCTTTACCCCCAAATGCAGACGCTCCTCCTaGTTTAGGTCTGGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: TVSYFIHVWTSDRIFTPKCRRSS*FRSGAS
Trigger: AGAGGCCCCAGACCTAAAGCAGGAGGAGCGTCTGCA...TTTGGGGGTAAAGATTCTGTCACTAGTCCAGACATGGATGAAATAACTCACGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR GCA 90 bp CTGGAGTTAAAACATGGGAACCAAAGTTTGGCAACCTGGCCTCATTTCCTCCCACCGTATCATCAGATGTaGTACCCAGTCCAGAACGCT +
Preference number: 4 (lower is better)
Translates to: LELKHGNQSLATWPHFLPPYHQM*YPVQNA
Trigger: AGCGTTCTGGACTGGGTAGCACATCTGATGATACGG...TGGGAGGAAATGAGGCCAGGTTGCCAAACTTTGGTTCCCATGTTTTAACTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265956.8
CDS-3UTR GCA 90 bp GGGTCACTCATGGGTCTCCGGACAGAAGATACTATATCAGAGCTCCTGCTTCGAAATATCCTCAGAGGTTaGACTTATGCCGGACACAAC +
Preference number: 4 (lower is better)
Translates to: GSLMGLRTEDTISELLLRNILRG*TYAGHN
Trigger: GTTGTGTCCGGCATAAGTGCAACCTCTGAGGATATT...TCGAAGCAGGAGCTCTGATATAGTATCTTCTGTCCGGAGACCCATGAGTGACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265956.8
CDS-3UTR GCA 90 bp TCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCTGATTAGTAGCACCAATGGCTaGAGCTGGAGGGAGTTCTCG +
Preference number: 4 (lower is better)
Translates to: SSAFKAADAPSQRSVCLISSTNG*SWREFS
Trigger: CGAGAACTCCCTCCAGCTGCAGCCATTGGTGCTACT...AATCAGACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp TCCTCCGCCAGCTATGGAGTCATGAGCACCCGAACCCATTTCACAGGTGTCACATGTCTTAAGTACATCTaGATTGAGCCTCTGAATGAG +
Preference number: 4 (lower is better)
Translates to: SSASYGVMSTRTHFTGVTCLKYI*IEPLNE
Trigger: CTCATTCAGAGGCTCAATGCAGATGTACTTAAGACA...TGTGACACCTGTGAAATGGGTTCGGGTGCTCATGACTCCATAGCTGGCGGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR GCA 90 bp ATGCAACTCAGAAAGGAAAGAGCCCAAAGACGAGAGAACCTGCTTGTTAGCTCACAGCTCTCCAGTTCTTaGAGACGCTCCTCCTGCTTT +
Preference number: 4 (lower is better)
Translates to: MQLRKERAQRRENLLVSSQLSSS*RRSSCF
Trigger: AAAGCAGGAGGAGCGTCTGCAAGAACTGGAGAGCTG...TGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGCTCTTTCCTTTCTGAGTTGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp TTAAAACATGGGAACCAAAGTTTGGCAACCTGGCCTCATTTCCTCCCACAGCTCCCGTATCATCAGATGTaGTACCCAGTCCAGAACAGC +
Preference number: 4 (lower is better)
Translates to: LKHGNQSLATWPHFLPQLPYHQM*YPVQNS
Trigger: GCTGTTCTGGACTGGGTAGCACATCTGATGATACGG...GAGCTGTGGGAGGAAATGAGGCCAGGTTGCCAAACTTTGGTTCCCATGTTTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497580.5
CDS-3UTR GCA 90 bp GCCCAAAGACGAGAGAACCTGCTTGTTAGCTCATTAACCTGTTTAGTAAAGATCAGCCACCTGAGCTTGTaGACTGAGTCTAGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: AQRRENLLVSSLTCLVKISHLSL*TESRAG
Trigger: CCCAGCCCTAGACTCAGTGCACAAGCTCAGGTGGCT...GATCTTTACTAAACAGGTTAATGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp AAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTAGCCACCTGAGCTTGTaGACTGAGTCTAGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: KQSSAFKAADAPSQRSVCSHLSL*TESRAG
Trigger: CCCAGCCCTAGACTCAGTGCACAAGCTCAGGTGGCT...ACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp ACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTAGCCACCTGAGCTTGTaGACTGAGTCTAGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: TKQSSAFKAADAPSQRSVSHLSL*TESRAG
Trigger: CCCAGCCCTAGACTCAGTGCACAAGCTCAGGTGGCT...AACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp ATCATACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATATCCTGCGGGTGGGCTaGTTGGCTTGCAGAGTCTGG +
Preference number: 4 (lower is better)
Translates to: IIQNNLQPSKQLMHLLRDILRVG*LACRVW
Trigger: CCAGACTCTGCAAGCCAAGCAGCCCACCCGCAGGAT...ATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGTATGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp TCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCTGATTGAGAAAGCTGAATCCTaGGGGTGGGCTGCTTGGCTT +
Preference number: 4 (lower is better)
Translates to: SSAFKAADAPSQRSVCLIEKAES*GWAAWL
Trigger: AAGCCAAGCAGCCCACCCGCAGGATTCAGCTTTCTC...AATCAGACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp GCTTTGGTGTGCCTCCATGGCCAATTTTTCAGGCACCAAAACCCATTCCTGATTTCTTCACTCGCGTTTTaGCATATGACATCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: ALVCLHGQFFRHQNPFLISSLAF*HMTSWA
Trigger: GGCCCAGGATGTCATATGGCAAAACGCGAGTGAAGA...AATCAGGAATGGGTTTTGGTGCCTGAAAAATTGGCCATGGAGGCACACCAAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR GCA 90 bp GCCCCCGTATTGGGGCTGAGATTGTTCTCTTGCTCACGCACCTCAGGGACACATTTTAATGAATTCTACTaGTGCTGTGAACTGCATCCA +
Preference number: 4 (lower is better)
Translates to: APVLGLRLFSCSRTSGTHFNEFY*CCELHP
Trigger: TGGATGCAGTTCACAGCAGCAGTAGAATTCATTAAA...ATGTGTCCCTGAGGTGCGTGAGCAAGAGAACAATCTCAGCCCCAATACGGGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR GCA 90 bp GCCCCCGTATTGGGGCTGAGATTGTTCTCTTGCTCACGCACCTCAGGGACACATTATTCTAATCCTCAGTaGAACTCATACCTTCTTTCC +
Preference number: 4 (lower is better)
Translates to: APVLGLRLFSCSRTSGTHYSNPQ*NSYLLS
Trigger: GGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATA...ATGTGTCCCTGAGGTGCGTGAGCAAGAGAACAATCTCAGCCCCAATACGGGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR GCA 90 bp ATGTCATGTATGGTAATCAGTCTATCTCCTAATGCAGGCTCACAAACTTCCACGCCGGGCTTGGTGACATaGGCCTGTAGTCCTAGCTAC +
Preference number: 4 (lower is better)
Translates to: MSCMVISLSPNAGSQTSTPGLVT*ACSPSY
Trigger: GTAGCTAGGACTACAGGCGCATGTCACCAAGCCCGG...CGTGGAAGTTTGTGAGCCTGCATTAGGAGATAGACTGATTACCATACATGACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR GCA 90 bp GATGCACCTTCTCAGAGATCTGTTTGTCTGATTAACAGTCTGCTGCCTTGGTGGGCTACCCACACTGTCTaGCATTATCCAAGTGGAGAC +
Preference number: 4 (lower is better)
Translates to: DAPSQRSVCLINSLLPWWATHTV*HYPSGD
Trigger: GTCTCCACTTGGATAATGGCAGACAGTGTGGGTAGC...CCACCAAGGCAGCAGACTGTTAATCAGACAAACAGATCTCTGAGAAGGTGCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR CCA 90 bp TTGACAGTAAGGGCAGGTCCTAATGGTCTTTGTATCCAGTGTCTATCACAGTGCATTGACGGAAGACAATaGAGGGGTCTCCACTGCACG +
Preference number: 4 (lower is better)
Translates to: LTVRAGPNGLCIQCLSQCIDGRQ*RGLHCT
Trigger: CGTGCAGTGGAGACCCCTCCATTGTCTTCCGTCAAT...GCACTGTGATAGACACTGGATACAAAGACCATTAGGACCTGCCCTTACTGTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394084.5
CDS-3UTR CCA 90 bp TTGTATCCAGTGTCTATCACAGTGCCTCATGTGCAAGACACATCCACTCTCACATACTTTTTCCTGGCTTaGCCGGGGGTAGGTTTGCCA +
Preference number: 4 (lower is better)
Translates to: LYPVSITVPHVQDTSTLTYFFLA*PGVGLP
Trigger: TGGCAAACCTACCCCCGGCCAAGCCAGGAAAAAGTA...TGTGAGAGTGGATGTGTCTTGCACATGAGGCACTGTGATAGACACTGGATACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000394084.5
CDS-3UTR CCA 90 bp ATGCAACTCAGAAAGGAAAGAGCCCAAAGACGAGAGAACCTGCTTGTTAGCTCAGGTCCATTAGCATATTaGTGCGGCTTCTGCTCCGAG +
Preference number: 4 (lower is better)
Translates to: MQLRKERAQRRENLLVSSGPLAY*CGFCSE
Trigger: CTCGGAGCAGAAGCCGCACCAATATGCTAATGGACC...TGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGCTCTTTCCTTTCTGAGTTGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp GATGCACCTTCTCAGAGATCTGTTTGTCTGATTAACAGTCTGCTGCCTTGGTGGGACCAACACCTCTTCTaGTTGCACCTCCTGAATGGT +
Preference number: 4 (lower is better)
Translates to: DAPSQRSVCLINSLLPWWDQHLF*LHLLNG
Trigger: ACCATTCAGGAGGTGCAACCAGAAGAGGTGTTGGTC...CCACCAAGGCAGCAGACTGTTAATCAGACAAACAGATCTCTGAGAAGGTGCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp ATCATACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCACAACACTGAGGCCTaGTGTGCTGGGGCGGGAACT +
Preference number: 4 (lower is better)
Translates to: IIQNNLQPSKQLMHLLRDHNTEA*CAGAGT
Trigger: AGTTCCCGCCCCAGCACACCAGGCCTCAGTGTTGTG...ATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGTATGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp TCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCTGATTTGGGGGATCTGGTGGTaGATGCGATGGCCTAGCATA +
Preference number: 4 (lower is better)
Translates to: SSAFKAADAPSQRSVCLIWGIWW*MRWPSI
Trigger: TATGCTAGGCCATCGCATCCACCACCAGATCCCCCA...AATCAGACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp ACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTCAGGATTGGGGGATCTaGTGGTGGATGCGATGGCCT +
Preference number: 4 (lower is better)
Translates to: TKQSSAFKAADAPSQRSVQDWGI*WWMRWP
Trigger: AGGCCATCGCATCCACCACCAGATCCCCCAATCCTG...AACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp TGTTCCTGTCTGATTTCTCATCATCGCTATCTTTGCGTTCTTCAGTCTCTCCTCAGCTCCTTCCAGGATTaGGGGATCTGGTGGTGGATG +
Preference number: 4 (lower is better)
Translates to: CSCLISHHRYLCVLQSLLSSFQD*GIWWWM
Trigger: CATCCACCACCAGATCCCCCAATCCTGGAAGGAGCT...GAGGAGAGACTGAAGAACGCAAAGATAGCGATGATGAGAAATCAGACAGGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR CCA 90 bp ATGCAACTCAGAAAGGAAAGAGCCCAAAGACGAGAGAACCTGCTTGTTAGCTCAAGCTGGGGTCACTCATaGGTCTCCGGACAGAAGATA +
Preference number: 4 (lower is better)
Translates to: MQLRKERAQRRENLLVSSSWGHS*VSGQKI
Trigger: TATCTTCTGTCCGGAGACCCATGAGTGACCCCAGCT...TGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGCTCTTTCCTTTCTGAGTTGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp GCCCAAAGACGAGAGAACCTGCTTGTTAGCTCATTAACCTGTTTAGTAAAGATCTCGCTCTTCATTTCCTaGACGCCGGTTCCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: AQRRENLLVSSLTCLVKISLFIS*TPVPAG
Trigger: CCCAGCTGGAACCGGCGTCCAGGAAATGAAGAGCGA...GATCTTTACTAAACAGGTTAATGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp ACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTCGCTCTTCATTTCCTaGACGCCGGTTCCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: TKQSSAFKAADAPSQRSVSLFIS*TPVPAG
Trigger: CCCAGCTGGAACCGGCGTCCAGGAAATGAAGAGCGA...AACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp TCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCTGATTACCAATGGCTGCAGCTaGAGGGAGTTCTCGCTCTTC +
Preference number: 4 (lower is better)
Translates to: SSAFKAADAPSQRSVCLITNGCS*REFSLF
Trigger: GAAGAGCGAGAACTCCCTCCAGCTGCAGCCATTGGT...AATCAGACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp CACCACTATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCATGCGGGTGGGCTGCTTaGCTTGCAGAGTCTGGGAGA +
Preference number: 4 (lower is better)
Translates to: HHYSNPQCNSYLLSIRCSCGWAA*LAESGR
Trigger: TCTCCCAGACTCTGCAAGCCAAGCAGCCCACCCGCA...TGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATAGTGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp GCCCCCGTATTGGGGCTGAGATTGTTCTCTTGCTCACGCACCTCAGGGACACATGAGATAAGCAATATATaGGGCTCTTTTTCTGTAGTC +
Preference number: 4 (lower is better)
Translates to: APVLGLRLFSCSRTSGTHEISNI*GSFSVV
Trigger: GACTACAGAAAAAGAGCCCCATATATTGCTTATCTC...ATGTGTCCCTGAGGTGCGTGAGCAAGAGAACAATCTCAGCCCCAATACGGGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR CCA 90 bp TCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCTGATTCCAGGTGAGCCTGTGTaGTCTGTAGTCCTTGTCGAC +
Preference number: 4 (lower is better)
Translates to: SSAFKAADAPSQRSVCLIPGEPV*SVVLVD
Trigger: GTCGACAAGGACTACAGACCACACAGGCTCACCTGG...AATCAGACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp TCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCTGATTGGACAGAGTCCTCATTaGCCAGGCTCAGGAGGTTCA +
Preference number: 4 (lower is better)
Translates to: SSAFKAADAPSQRSVCLIGQSPH*PGSGGS
Trigger: TGAACCTCCTGAGCCTGGCCAATGAGGACTCTGTCC...AATCAGACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp GGAGCTCTGTCTGGGATTTCTGCAGTATATTATTTCGGAGGAGAAGAACCACCAGGTGGGCCTTGGTCTTaGTCACTTTCGGTCATCGAT +
Preference number: 4 (lower is better)
Translates to: GALSGISAVYYFGGEEPPGGPWS*SLSVID
Trigger: ATCGATGACCGAAAGTGACCAAGACCAAGGCCCACC...TGGTGGTTCTTCTCCTCCGAAATAATATACTGCAGAAATCCCAGACAGAGCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR CCA 90 bp TCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCTGATTAACAGTCTGCTGCCTTaGTGGGCCTTGGTCTTGGTC +
Preference number: 4 (lower is better)
Translates to: SSAFKAADAPSQRSVCLINSLLP*WALVLV
Trigger: GACCAAGACCAAGGCCCACCAAGGCAGCAGACTGTT...AATCAGACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp GGAGCTCTGTCTGGGATTTCTGCAGTATATTATTTCGGAGGAGAAGAACCACCAGGGAATCACTTGAACTaGGAGGTGGAGGTTGCAGTG +
Preference number: 4 (lower is better)
Translates to: GALSGISAVYYFGGEEPPGNHLN*EVEVAV
Trigger: CACTGCAACCTCCACCTCCCAGTTCAAGTGATTCCC...TGGTGGTTCTTCTCCTCCGAAATAATATACTGCAGAAATCCCAGACAGAGCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR CCA 90 bp ACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTCTCCTCCGCCAGCTATaGAGTCATGAGCACCCGAAC +
Preference number: 4 (lower is better)
Translates to: TKQSSAFKAADAPSQRSVLLRQL*SHEHPN
Trigger: GTTCGGGTGCTCATGACTCCATAGCTGGCGGAGGAG...AACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
3UTR CAA 72 bp AGTGATGGCCCATGTACAAGACTTGTGCTTGAAGCTTaGGTGTGCCTCCATGGCCAATTTTTCAGGCACCAA +
Preference number: 4 (lower is better)
Translates to: SDGPCTRLVLEA*VCLHGQFFRHQ
Trigger: TTGGTGCCTGAAAAATTGGCCATGGAGGCACACCAAAGCTTCAAGCACAAGTCTTGTACATGGGCCATCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR TCA 90 bp ACACACGAAGTGAAACCAGACAGTGATGGCCCATGTACAAGACTTGTGCTTGAAATCCTTCCAGAAGATTaGCGGAAGACAATGGAGGGG +
Preference number: 4 (lower is better)
Translates to: THEVKPDSDGPCTRLVLEILPED*RKTMEG
Trigger: CCCCTCCATTGTCTTCCGTCAATCTTCTGGAAGGAT...TTCAAGCACAAGTCTTGTACATGGGCCATCACTGTCTGGTTTCACTTCGTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR TCA 90 bp TCTCTCCTCTTGAGGAGTCCTTACTCGGGGATGAAGATGATGAATGAGGTGCAGCTATCTTCTCTCAGTTaGTCTCCAGACATCACACTC +
Preference number: 4 (lower is better)
Translates to: SLLLRSPYSGMKMMNEVQLSSLS*SPDITL
Trigger: GAGTGTGATGTCTGGAGATCAACTGAGAGAAGATAG...CTGCACCTCATTCATCATCTTCATCCCCGAGTAAGGACTCCTCAAGAGGAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR TCA 90 bp TATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCATTAATGTGCCGGACACAACACTaGGGCCTGGTGTGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: YSNPQCNSYLLSIRCSLMCRTQH*GLVCWG
Trigger: GCCCCAGCACACCAGGCCTCAGTGTTGTGTCCGGCA...CATTAATGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp GGAGCTCTGTCTGGGATTTCTGCAGTATATTATTTCGGAGGAGAAGAACCACCAAGCTGGTGGGCACCGTaGGTTATTTCATCCATGTCT +
Preference number: 4 (lower is better)
Translates to: GALSGISAVYYFGGEEPPSWWAP*VISSMS
Trigger: AGACATGGATGAAATAACTCACGGTGCCCACCAGCT...TGGTGGTTCTTCTCCTCCGAAATAATATACTGCAGAAATCCCAGACAGAGCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR TCA 90 bp ATGCAACTCAGAAAGGAAAGAGCCCAAAGACGAGAGAACCTGCTTGTTAGCTCAAGCTGGTGGGCACCGTaGGTTATTTCATCCATGTCT +
Preference number: 4 (lower is better)
Translates to: MQLRKERAQRRENLLVSSSWWAP*VISSMS
Trigger: AGACATGGATGAAATAACTCACGGTGCCCACCAGCT...TGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGCTCTTTCCTTTCTGAGTTGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp TCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCTGATTTTCAGTCTCTCCTCTTaGGGAGTCCTTACTCGGGGA +
Preference number: 4 (lower is better)
Translates to: SSAFKAADAPSQRSVCLIFSLSS*GVLTRG
Trigger: TCCCCGAGTAAGGACTCCTCAAGAGGAGAGACTGAA...AATCAGACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp TTGACAGTAAGGGCAGGTCCTAATGGTCTTTGTATCCAGTGTCTATCACAGTGCGAAAGGCTCAAAGGCTaGTCACTGAATGCCAGCTAC +
Preference number: 4 (lower is better)
Translates to: LTVRAGPNGLCIQCLSQCERLKG*SLNASY
Trigger: GTAGCTGGCATTCAGTGATCAGCCTTTGAGCCTTTC...GCACTGTGATAGACACTGGATACAAAGACCATTAGGACCTGCCCTTACTGTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394084.5
CDS-3UTR TCA 90 bp GATGCACCTTCTCAGAGATCTGTTTGTCTGATTAACAGTCTGCTGCCTTGGTGGATAAGCGTTCCTGCTTaGGGTGATGAGCCAGAGTAT +
Preference number: 4 (lower is better)
Translates to: DAPSQRSVCLINSLLPWWISVPA*GDEPEY
Trigger: ATACTCTGGCTCATCACCTCAAGCAGGAACGCTTAT...CCACCAAGGCAGCAGACTGTTAATCAGACAAACAGATCTCTGAGAAGGTGCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp GCTTTGGTGTGCCTCCATGGCCAATTTTTCAGGCACCAAAACCCATTCCTGATTTCTGCATTGAGCCTCTaGATGAGCTGTTTCTCAGAG +
Preference number: 4 (lower is better)
Translates to: ALVCLHGQFFRHQNPFLISALSL*MSCFSE
Trigger: CTCTGAGAAACAGCTCATTCAGAGGCTCAATGCAGA...AATCAGGAATGGGTTTTGGTGCCTGAAAAATTGGCCATGGAGGCACACCAAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR TCA 90 bp ACACACGAAGTGAAACCAGACAGTGATGGCCCATGTACAAGACTTGTGCTTGAAATCATCTGTGAGTGTTaGGAATCTGTCAGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: THEVKPDSDGPCTRLVLEIICEC*ESVRPQ
Trigger: CTGGGGCCTGACAGATTCTCAACACTCACAGATGAT...TTCAAGCACAAGTCTTGTACATGGGCCATCACTGTCTGGTTTCACTTCGTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000394104.6
CDS-3UTR TCA 90 bp ATGCAACTCAGAAAGGAAAGAGCCCAAAGACGAGAGAACCTGCTTGTTAGCTCAATCATCTGTGAGTGTTaGGAATCTGTCAGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: MQLRKERAQRRENLLVSSIICEC*ESVRPQ
Trigger: CTGGGGCCTGACAGATTCTCAACACTCACAGATGAT...TGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGCTCTTTCCTTTCTGAGTTGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000495955.5
CDS-3UTR TCA 90 bp ATGCAACTCAGAAAGGAAAGAGCCCAAAGACGAGAGAACCTGCTTGTTAGCTCAGGCTGGGATCATCTGTaGGTGTTGAGAATCTGTCAG +
Preference number: 4 (lower is better)
Translates to: MQLRKERAQRRENLLVSSGWDHL*VLRICQ
Trigger: CTGACAGATTCTCAACACTCACAGATGATCCCAGCC...TGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGCTCTTTCCTTTCTGAGTTGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000495955.5
CDS-3UTR TCA 90 bp ATGCAACTCAGAAAGGAAAGAGCCCAAAGACGAGAGAACCTGCTTGTTAGCTCAATATCCTCAGCCACCTaGGCTTGTGCACTGAGTCTA +
Preference number: 4 (lower is better)
Translates to: MQLRKERAQRRENLLVSSISSAT*ACALSL
Trigger: TAGACTCAGTGCACAAGCTCAGGTGGCTGAGGATAT...TGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGCTCTTTCCTTTCTGAGTTGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp ACACACGAAGTGAAACCAGACAGTGATGGCCCATGTACAAGACTTGTGCTTGAAATATCCTCAGCCACCTaGGCTTGTGCACTGAGTCTA +
Preference number: 4 (lower is better)
Translates to: THEVKPDSDGPCTRLVLEISSAT*ACALSL
Trigger: TAGACTCAGTGCACAAGCTCAGGTGGCTGAGGATAT...TTCAAGCACAAGTCTTGTACATGGGCCATCACTGTCTGGTTTCACTTCGTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR TCA 90 bp ACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTCTGTAAGAGAAAGCTaGATCCTGCGGGTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: TKQSSAFKAADAPSQRSVSVRES*ILRVGC
Trigger: GCAGCCCACCCGCAGGATTCAGCTTTCTCTTACAGA...AACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp GGAGCTCTGTCTGGGATTTCTGCAGTATATTATTTCGGAGGAGAAGAACCACCAAATAGCCTTTCCAGGTaGGCCTGTGTGGTCTGTAGT +
Preference number: 4 (lower is better)
Translates to: GALSGISAVYYFGGEEPPNSLSR*ACVVCS
Trigger: ACTACAGACCACACAGGCTCACCTGGAAAGGCTATT...TGGTGGTTCTTCTCCTCCGAAATAATATACTGCAGAAATCCCAGACAGAGCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR TCA 90 bp TCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCTGATTTCGCGTTTTGCCATATaGCATCCTGGGCCATTGCAC +
Preference number: 4 (lower is better)
Translates to: SSAFKAADAPSQRSVCLISRFAI*HPGPLH
Trigger: GTGCAATGGCCCAGGATGTCATATGGCAAAACGCGA...AATCAGACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp GGAGCTCTGTCTGGGATTTCTGCAGTATATTATTTCGGAGGAGAAGAACCACCAAGGAAACACACGAAGTaGAACCAGACAGTGATGGCC +
Preference number: 4 (lower is better)
Translates to: GALSGISAVYYFGGEEPPRKHTK*NQTVMA
Trigger: GGCCATCACTGTCTGGTTTCACTTCGTGTGTTTCCT...TGGTGGTTCTTCTCCTCCGAAATAATATACTGCAGAAATCCCAGACAGAGCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR TCA 90 bp CACCACTATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCAGGCAGGGGAATCACTTaGACTGGGAGGTGGAGGTTG +
Preference number: 4 (lower is better)
Translates to: HHYSNPQCNSYLLSIRCSGRGIT*TGRWRL
Trigger: CAACCTCCACCTCCCAGTTCAAGTGATTCCCCTGCC...TGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATAGTGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR TCA 90 bp GCTTTGGTGTGCCTCCATGGCCAATTTTTCAGGCACCAAAACCCATTCCTGATTGACAGTTACAGCCAATaGAGTGCACGACTCTGTACA +
Preference number: 4 (lower is better)
Translates to: ALVCLHGQFFRHQNPFLIDSYSQ*SARLCT
Trigger: TGTACAGAGTCGTGCACTTCATTGGCTGTAACTGTC...AATCAGGAATGGGTTTTGGTGCCTGAAAAATTGGCCATGGAGGCACACCAAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR TCA 90 bp GATGCACCTTCTCAGAGATCTGTTTGTCTGATTAACAGTCTGCTGCCTTGGTGGGACAGTTACAGCCAATaGAGTGCACGACTCTGTACA +
Preference number: 4 (lower is better)
Translates to: DAPSQRSVCLINSLLPWWDSYSQ*SARLCT
Trigger: TGTACAGAGTCGTGCACTTCATTGGCTGTAACTGTC...CCACCAAGGCAGCAGACTGTTAATCAGACAAACAGATCTCTGAGAAGGTGCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR TCA 90 bp GATGCACCTTCTCAGAGATCTGTTTGTCTGATTAACAGTCTGCTGCCTTGGTGGACACAGCTGGCCTCGTaGTGTATTTACGATGGGATT +
Preference number: 4 (lower is better)
Translates to: DAPSQRSVCLINSLLPWWTQLAS*CIYDGI
Trigger: AATCCCATCGTAAATACATCACGAGGCCAGCTGTGT...CCACCAAGGCAGCAGACTGTTAATCAGACAAACAGATCTCTGAGAAGGTGCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR TCA 90 bp TCCTCCGCCAGCTATGGAGTCATGAGCACCCGAACCCATTTCACAGGTGTCACAGAATGTTTCCTGGGCTaGTTTTGTACTTTTACACTA +
Preference number: 4 (lower is better)
Translates to: SSASYGVMSTRTHFTGVTECFLG*FCTFTL
Trigger: TAGTGTAAAAGTACAAAATCAGCCCAGGAAACATTC...TGTGACACCTGTGAAATGGGTTCGGGTGCTCATGACTCCATAGCTGGCGGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR TCA 90 bp GATGCACCTTCTCAGAGATCTGTTTGTCTGATTAACAGTCTGCTGCCTTGGTGGGTAACTAGTGGCTGCTaGATGTTTCCTGGGCTGATT +
Preference number: 4 (lower is better)
Translates to: DAPSQRSVCLINSLLPWWVTSGC*MFPGLI
Trigger: AATCAGCCCAGGAAACATTCAGCAGCCACTAGTTAC...CCACCAAGGCAGCAGACTGTTAATCAGACAAACAGATCTCTGAGAAGGTGCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR GCA 90 bp GGAGCTCTGTCTGGGATTTCTGCAGTATATTATTTCGGAGGAGAAGAACCACCAGAGATCAGTACACATTaGCCTGACCTCCCCAACTTC +
Preference number: 4 (lower is better)
Translates to: GALSGISAVYYFGGEEPPEISTH*PDLPNF
Trigger: GAAGTTGGGGAGGTCAGGGCAATGTGTACTGATCTC...TGGTGGTTCTTCTCCTCCGAAATAATATACTGCAGAAATCCCAGACAGAGCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR GCA 90 bp TCATGGGTCTCCGGACAGAAGATACTATATCAGAGCTCCTGCTTCGAACTAGTCCAAACTTTCCAAGGCTaGTCTTTGTTCGGGGATCTC +
Preference number: 4 (lower is better)
Translates to: SWVSGQKILYQSSCFELVQTFQG*SLFGDL
Trigger: GAGATCCCCGAACAAAGAGCAGCCTTGGAAAGTTTG...GACTAGTTCGAAGCAGGAGCTCTGATATAGTATCTTCTGTCCGGAGACCCATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR GCA 90 bp GATGCACCTTCTCAGAGATCTGTTTGTCTGATTAACAGTCTGCTGCCTTGGTGGCAAACTTTCCAAGGCTaGTCTTTGTTCGGGGATCTC +
Preference number: 4 (lower is better)
Translates to: DAPSQRSVCLINSLLPWWQTFQG*SLFGDL
Trigger: GAGATCCCCGAACAAAGAGCAGCCTTGGAAAGTTTG...CCACCAAGGCAGCAGACTGTTAATCAGACAAACAGATCTCTGAGAAGGTGCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp GAGACTCTGACTGAGAAGGAGGAGAGGTCAGCTGGTGGGCACCGTGAGTTATTTGAGTCATTTCTAAACTaGTACTTTTTCCTGGCTTGG +
Preference number: 4 (lower is better)
Translates to: ETLTEKEERSAGGHRELFESFLN*YFFLAW
Trigger: CCAAGCCAGGAAAAAGTAGCAGTTTAGAAATGACTC...AAATAACTCACGGTGCCCACCAGCTGACCTCTCCTCCTTCTCAGTCAGAGTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR GCA 90 bp GATGCACCTTCTCAGAGATCTGTTTGTCTGATTAACAGTCTGCTGCCTTGGTGGCTTCAACTCCATTACTaGCAGAAGGTCCTGCTCCAA +
Preference number: 4 (lower is better)
Translates to: DAPSQRSVCLINSLLPWWLQLHY*QKVLLQ
Trigger: TTGGAGCAGGACCTTCTGGCAGTAATGGAGTTGAAG...CCACCAAGGCAGCAGACTGTTAATCAGACAAACAGATCTCTGAGAAGGTGCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp GAGACTCTGACTGAGAAGGAGGAGAGGTCAGCTGGTGGGCACCGTGAGTTATTTGCACCTGCAATTTCTTaGAAGCGATCTTCATCAATA +
Preference number: 4 (lower is better)
Translates to: ETLTEKEERSAGGHRELFAPAIS*KRSSSI
Trigger: TATTGATGAAGATCGCTTGCAAGAAATTGCAGGTGC...AAATAACTCACGGTGCCCACCAGCTGACCTCTCCTCCTTCTCAGTCAGAGTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR GCA 90 bp ATGCAACTCAGAAAGGAAAGAGCCCAAAGACGAGAGAACCTGCTTGTTAGCTCAGGAGGCACAGCAAACTaGCTAACATGTTCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: MQLRKERAQRRENLLVSSGGTAN*LTCSLL
Trigger: CAGCAGAGAACATGTTAGGCAGTTTGCTGTGCCTCC...TGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGCTCTTTCCTTTCTGAGTTGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp ACACACGAAGTGAAACCAGACAGTGATGGCCCATGTACAAGACTTGTGCTTGAAGGAGGCACAGCAAACTaGCTAACATGTTCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: THEVKPDSDGPCTRLVLEGGTAN*LTCSLL
Trigger: CAGCAGAGAACATGTTAGGCAGTTTGCTGTGCCTCC...TTCAAGCACAAGTCTTGTACATGGGCCATCACTGTCTGGTTTCACTTCGTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR GCA 90 bp CACCACTATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCATGCAGACGCTCCTCCTaGTTTAGGTCTGGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: HHYSNPQCNSYLLSIRCSCRRSS*FRSGAS
Trigger: AGAGGCCCCAGACCTAAAGCAGGAGGAGCGTCTGCA...TGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATAGTGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp CGTTCTTCAGTCTCTCCTCTTGAGGAGTCCTTACTCGGGGATGAAGATGATGAACCCCAAAATCAGAGCTaGACTCAGATCTCAGGTCTT +
Preference number: 4 (lower is better)
Translates to: RSSVSPLEESLLGDEDDEPQNQS*TQISGL
Trigger: AAGACCTGAGATCTGAGTGCAGCTCTGATTTTGGGG...TTCATCATCTTCATCCCCGAGTAAGGACTCCTCAAGAGGAGAGACTGAAGAACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR GCA 90 bp GATGCACCTTCTCAGAGATCTGTTTGTCTGATTAACAGTCTGCTGCCTTGGTGGCCCCAAAATCAGAGCTaGACTCAGATCTCAGGTCTT +
Preference number: 4 (lower is better)
Translates to: DAPSQRSVCLINSLLPWWPQNQS*TQISGL
Trigger: AAGACCTGAGATCTGAGTGCAGCTCTGATTTTGGGG...CCACCAAGGCAGCAGACTGTTAATCAGACAAACAGATCTCTGAGAAGGTGCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp TCTCTCCTCTTGAGGAGTCCTTACTCGGGGATGAAGATGATGAATGAGGTGCAGCATCATCGCTATCTTTaGGTTCTTCAGTCTCTCCTC +
Preference number: 4 (lower is better)
Translates to: SLLLRSPYSGMKMMNEVQHHRYL*VLQSLL
Trigger: GAGGAGAGACTGAAGAACGCAAAGATAGCGATGATG...CTGCACCTCATTCATCATCTTCATCCCCGAGTAAGGACTCCTCAAGAGGAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR GCA 90 bp TCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCTGATTCAGCTCTCCAGTTCTTaGAGACGCTCCTCCTGCTTT +
Preference number: 4 (lower is better)
Translates to: SSAFKAADAPSQRSVCLIQLSSS*RRSSCF
Trigger: AAAGCAGGAGGAGCGTCTGCAAGAACTGGAGAGCTG...AATCAGACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp GATGCACCTTCTCAGAGATCTGTTTGTCTGATTAACAGTCTGCTGCCTTGGTGGTTCATAGTTTGCCATTaGTCCATCACTGGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: DAPSQRSVCLINSLLPWWFIVCH*SITGAG
Trigger: ACCAGCCCCAGTGATGGAGCAATGGCAAACTATGAA...CCACCAAGGCAGCAGACTGTTAATCAGACAAACAGATCTCTGAGAAGGTGCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp TCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCTGATTCGAGATGTTCTGCAGTaGTTCGTCACGGGGAGAATC +
Preference number: 4 (lower is better)
Translates to: SSAFKAADAPSQRSVCLIRDVLQ*FVTGRI
Trigger: GATTCTCCCCGTGACGAAGCACTGCAGAACATCTCG...AATCAGACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp GCCCAAAGACGAGAGAACCTGCTTGTTAGCTCATTAACCTGTTTAGTAAAGATCTCAGCCGAGATGTTCTaGAGTGCTTCGTCACGGGGA +
Preference number: 4 (lower is better)
Translates to: AQRRENLLVSSLTCLVKISAEMF*SASSRG
Trigger: TCCCCGTGACGAAGCACTGCAGAACATCTCGGCTGA...GATCTTTACTAAACAGGTTAATGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp AAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTTCAGCCGAGATGTTCTaGAGTGCTTCGTCACGGGGA +
Preference number: 4 (lower is better)
Translates to: KQSSAFKAADAPSQRSVCSAEMF*SASSRG
Trigger: TCCCCGTGACGAAGCACTGCAGAACATCTCGGCTGA...ACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp ACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTCAGCCGAGATGTTCTaGAGTGCTTCGTCACGGGGA +
Preference number: 4 (lower is better)
Translates to: TKQSSAFKAADAPSQRSVSAEMF*SASSRG
Trigger: TCCCCGTGACGAAGCACTGCAGAACATCTCGGCTGA...AACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp AAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTGTGGGCTGCTTGGCTTaGAGAGTCTGGGAGATCATC +
Preference number: 4 (lower is better)
Translates to: KQSSAFKAADAPSQRSVCVGCLA*RVWEII
Trigger: GATGATCTCCCAGACTCTGCAAGCCAAGCAGCCCAC...ACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp GTAGTACTAGTCTCTACTTGGGGACAAGAAAATAGAATATGCAACTCAGAAAGGATCCTGCGGGTGGGCTaGTTGGCTTGCAGAGTCTGG +
Preference number: 4 (lower is better)
Translates to: VVLVSTWGQENRICNSERILRVG*LACRVW
Trigger: CCAGACTCTGCAAGCCAAGCAGCCCACCCGCAGGAT...CCTTTCTGAGTTGCATATTCTATTTTCTTGTCCCCAAGTAGAGACTAGTACTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp GCCCAAAGACGAGAGAACCTGCTTGTTAGCTCATTAACCTGTTTAGTAAAGATCGAGAAAGCTGAATCCTaGGGGTGGGCTGCTTGGCTT +
Preference number: 4 (lower is better)
Translates to: AQRRENLLVSSLTCLVKIEKAES*GWAAWL
Trigger: AAGCCAAGCAGCCCACCCGCAGGATTCAGCTTTCTC...GATCTTTACTAAACAGGTTAATGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp TCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCTGATTAGCACATTCTCAGGATaGACTGCACTTTGTCCCGGG +
Preference number: 4 (lower is better)
Translates to: SSAFKAADAPSQRSVCLISTFSG*TALCPG
Trigger: CCCGGGACAAAGTGCAGTGCATCCTGAGAATGTGCT...AATCAGACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp ACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTGCCTCCGTGTTCATCTaGCCGAGGCTGTTTGTCACA +
Preference number: 4 (lower is better)
Translates to: TKQSSAFKAADAPSQRSVASVFI*PRLFVT
Trigger: TGTGACAAACAGCCTCGGGCAGATGAACACGGAGGC...AACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR GCA 90 bp AAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCACAGCCCTATCTCCTaGCTCCAGTGTAGCCCTTCA +
Preference number: 4 (lower is better)
Translates to: KQSSAFKAADAPSQRSVCHSPIS*LQCSPS
Trigger: TGAAGGGCTACACTGGAGGCAGGAGATAGGGCTGTG...ACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR GCA 90 bp ATGTCATGTATGGTAATCAGTCTATCTCCTAATGCAGGCTCACAAACTTCCACGAACCTTAGCTGCCCCTaGAACAGCTGTGCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: MSCMVISLSPNAGSQTSTNLSCP*NSCAVL
Trigger: GAGCACAGCACAGCTGTTGCAGGGGCAGCTAAGGTT...CGTGGAAGTTTGTGAGCCTGCATTAGGAGATAGACTGATTACCATACATGACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR GCA 90 bp TCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCTGATTAGAGGAAACCTTAGCTaGCCCTGCAACAGCTGTGCT +
Preference number: 4 (lower is better)
Translates to: SSAFKAADAPSQRSVCLIRGNLS*PCNSCA
Trigger: AGCACAGCTGTTGCAGGGGCAGCTAAGGTTTCCTCT...AATCAGACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR GCA 90 bp ATGCAACTCAGAAAGGAAAGAGCCCAAAGACGAGAGAACCTGCTTGTTAGCTCACTGAGATTGTTCTCTTaGTCACGCACCTCAGGGACA +
Preference number: 4 (lower is better)
Translates to: MQLRKERAQRRENLLVSSLRLFS*SRTSGT
Trigger: TGTCCCTGAGGTGCGTGAGCAAGAGAACAATCTCAG...TGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGCTCTTTCCTTTCTGAGTTGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR GCA 90 bp ACACACGAAGTGAAACCAGACAGTGATGGCCCATGTACAAGACTTGTGCTTGAAGCTACCCACACTGTCTaGCATTATCCAAGTGGAGAC +
Preference number: 4 (lower is better)
Translates to: THEVKPDSDGPCTRLVLEATHTV*HYPSGD
Trigger: GTCTCCACTTGGATAATGGCAGACAGTGTGGGTAGC...TTCAAGCACAAGTCTTGTACATGGGCCATCACTGTCTGGTTTCACTTCGTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR GCA 90 bp AGAGGTCAGCTGGTGGGCACCGTGAGTTATTTCATCCATGTCTGGACTAGTGACAGCTTTACTCCTGGATaGTCTCTTCTTTCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: RGQLVGTVSYFIHVWTSDSFTPG*SLLSGR
Trigger: TCTTCCTGAAAGAAGAGAGCATCCAGGAGTAAAGCT...GTCACTAGTCCAGACATGGATGAAATAACTCACGGTGCCCACCAGCTGACCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497580.5
CDS-3UTR CCA 90 bp TCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCTGATTGGTCCATTAGCATATTaGTGCGGCTTCTGCTCCGAG +
Preference number: 4 (lower is better)
Translates to: SSAFKAADAPSQRSVCLIGPLAY*CGFCSE
Trigger: CTCGGAGCAGAAGCCGCACCAATATGCTAATGGACC...AATCAGACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp GGAGCTCTGTCTGGGATTTCTGCAGTATATTATTTCGGAGGAGAAGAACCACCAGACCAACACCTCTTCTaGTTGCACCTCCTGAATGGT +
Preference number: 4 (lower is better)
Translates to: GALSGISAVYYFGGEEPPDQHLF*LHLLNG
Trigger: ACCATTCAGGAGGTGCAACCAGAAGAGGTGTTGGTC...TGGTGGTTCTTCTCCTCCGAAATAATATACTGCAGAAATCCCAGACAGAGCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR CCA 90 bp ATGCAACTCAGAAAGGAAAGAGCCCAAAGACGAGAGAACCTGCTTGTTAGCTCAGACCAACACCTCTTCTaGTTGCACCTCCTGAATGGT +
Preference number: 4 (lower is better)
Translates to: MQLRKERAQRRENLLVSSDQHLF*LHLLNG
Trigger: ACCATTCAGGAGGTGCAACCAGAAGAGGTGTTGGTC...TGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGCTCTTTCCTTTCTGAGTTGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp GGCATGGCTGAAACAAAACGTTTTCTCCACCAAGGTCTGTTCCTGTCTGATTTCATCCCTGGAGTAAGCTaGGGACCTGTACCTAAGGAA +
Preference number: 4 (lower is better)
Translates to: GMAETKRFLHQGLFLSDFIPGVS*GPVPKE
Trigger: TTCCTTAGGTACAGGTCCCCAGCTTACTCCAGGGAT...GAAATCAGACAGGAACAGACCTTGGTGGAGAAAACGTTTTGTTTCAGCCATGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR CCA 90 bp GTAGTACTAGTCTCTACTTGGGGACAAGAAAATAGAATATGCAACTCAGAAAGGCACAACACTGAGGCCTaGTGTGCTGGGGCGGGAACT +
Preference number: 4 (lower is better)
Translates to: VVLVSTWGQENRICNSERHNTEA*CAGAGT
Trigger: AGTTCCCGCCCCAGCACACCAGGCCTCAGTGTTGTG...CCTTTCTGAGTTGCATATTCTATTTTCTTGTCCCCAAGTAGAGACTAGTACTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp CGGTTCCAGCTGGGGTCACTCATGGGTCTCCGGACAGAAGATACTATATCAGAGGGTCTTCAATCTTATTaGGAATATCCTCAGAGGTTG +
Preference number: 4 (lower is better)
Translates to: RFQLGSLMGLRTEDTISEGLQSY*EYPQRL
Trigger: CAACCTCTGAGGATATTCCCAATAAGATTGAAGACC...CTCTGATATAGTATCTTCTGTCCGGAGACCCATGAGTGACCCCAGCTGGAACCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR CCA 90 bp GCCCCCGTATTGGGGCTGAGATTGTTCTCTTGCTCACGCACCTCAGGGACACATTATTTCATCCATGTCTaGACTAGTGACAGAATCTTT +
Preference number: 4 (lower is better)
Translates to: APVLGLRLFSCSRTSGTHYFIHV*TSDRIF
Trigger: AAAGATTCTGTCACTAGTCCAGACATGGATGAAATA...ATGTGTCCCTGAGGTGCGTGAGCAAGAGAACAATCTCAGCCCCAATACGGGGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR CCA 90 bp GATGCACCTTCTCAGAGATCTGTTTGTCTGATTAACAGTCTGCTGCCTTGGTGGACAGTGGATCAAACATaGCCAGCAGAGACTCTGACT +
Preference number: 4 (lower is better)
Translates to: DAPSQRSVCLINSLLPWWTVDQT*PAETLT
Trigger: AGTCAGAGTCTCTGCTGGCCATGTTTGATCCACTGT...CCACCAAGGCAGCAGACTGTTAATCAGACAAACAGATCTCTGAGAAGGTGCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp TCATGGGTCTCCGGACAGAAGATACTATATCAGAGCTCCTGCTTCGAACTAGTCAGCATAGTGAACCTTTaGCCTTACCACAGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: SWVSGQKILYQSSCFELVSIVNL*PYHSRS
Trigger: GCTTCTGCTGTGGTAAGGCCAAAGGTTCACTATGCT...GACTAGTTCGAAGCAGGAGCTCTGATATAGTATCTTCTGTCCGGAGACCCATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR CCA 90 bp GGAGCTCTGTCTGGGATTTCTGCAGTATATTATTTCGGAGGAGAAGAACCACCATGGTGGTGGATGCGATaGCCTAGCATAGTGAACCTT +
Preference number: 4 (lower is better)
Translates to: GALSGISAVYYFGGEEPPWWWMR*PSIVNL
Trigger: AAGGTTCACTATGCTAGGCCATCGCATCCACCACCA...TGGTGGTTCTTCTCCTCCGAAATAATATACTGCAGAAATCCCAGACAGAGCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR CCA 90 bp ACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGGGGGATCTGGTGGTaGATGCGATGGCCTAGCATA +
Preference number: 4 (lower is better)
Translates to: TKQSSAFKAADAPSQRSVWGIWW*MRWPSI
Trigger: TATGCTAGGCCATCGCATCCACCACCAGATCCCCCA...AACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp ATCATACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATGATTGGGGGATCTGGTaGTGGATGCGATGGCCTAGC +
Preference number: 4 (lower is better)
Translates to: IIQNNLQPSKQLMHLLRDDWGIW*WMRWPS
Trigger: GCTAGGCCATCGCATCCACCACCAGATCCCCCAATC...ATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGTATGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp ATCATACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCAGGATTGGGGGATCTaGTGGTGGATGCGATGGCCT +
Preference number: 4 (lower is better)
Translates to: IIQNNLQPSKQLMHLLRDQDWGI*WWMRWP
Trigger: AGGCCATCGCATCCACCACCAGATCCCCCAATCCTG...ATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGTATGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp GCCCAAAGACGAGAGAACCTGCTTGTTAGCTCATTAACCTGTTTAGTAAAGATCAGCTCCTTCCAGGATTaGGGGATCTGGTGGTGGATG +
Preference number: 4 (lower is better)
Translates to: AQRRENLLVSSLTCLVKISSFQD*GIWWWM
Trigger: CATCCACCACCAGATCCCCCAATCCTGGAAGGAGCT...GATCTTTACTAAACAGGTTAATGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp TTGAATGCCTCCATTTCAGCTGGAGTTAAAACATGGGAACCAAAGTTTGGCAACAGCTCCTTCCAGGATTaGGGGATCTGGTGGTGGATG +
Preference number: 4 (lower is better)
Translates to: LNASISAGVKTWEPKFGNSSFQD*GIWWWM
Trigger: CATCCACCACCAGATCCCCCAATCCTGGAAGGAGCT...GTTGCCAAACTTTGGTTCCCATGTTTTAACTCCAGCTGAAATGGAGGCATTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR CCA 90 bp GCTTTGGTGTGCCTCCATGGCCAATTTTTCAGGCACCAAAACCCATTCCTGATTATGGGAACCAAAGTTTaGCAACCTGGCCTCATTTCC +
Preference number: 4 (lower is better)
Translates to: ALVCLHGQFFRHQNPFLIMGTKV*QPGLIS
Trigger: GGAAATGAGGCCAGGTTGCCAAACTTTGGTTCCCAT...AATCAGGAATGGGTTTTGGTGCCTGAAAAATTGGCCATGGAGGCACACCAAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR CCA 90 bp GGGTCACTCATGGGTCTCCGGACAGAAGATACTATATCAGAGCTCCTGCTTCGAGCTGGAGTTAAAACATaGGAACCAAAGTTTGGCAAC +
Preference number: 4 (lower is better)
Translates to: GSLMGLRTEDTISELLLRAGVKT*EPKFGN
Trigger: GTTGCCAAACTTTGGTTCCCATGTTTTAACTCCAGC...TCGAAGCAGGAGCTCTGATATAGTATCTTCTGTCCGGAGACCCATGAGTGACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR CCA 90 bp AGTAATCGCAAATACCTCATCACTGTTAATCCACTTACTAAAAATCCTTTGGGCGACGCCGGTTCCAGCTaGGGTCACTCATGGGTCTCC +
Preference number: 4 (lower is better)
Translates to: SNRKYLITVNPLTKNPLGDAGSS*GHSWVS
Trigger: GGAGACCCATGAGTGACCCCAGCTGGAACCGGCGTC...GCCCAAAGGATTTTTAGTAAGTGGATTAACAGTGATGAGGTATTTGCGATTACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR CCA 90 bp TGCTTAACATTTACTGAATCAAAGGCTGAAGTAAATGGACTCTCATCTAGGTCTGACGCCGGTTCCAGCTaGGGTCACTCATGGGTCTCC +
Preference number: 4 (lower is better)
Translates to: CLTFTESKAEVNGLSSRSDAGSS*GHSWVS
Trigger: GGAGACCCATGAGTGACCCCAGCTGGAACCGGCGTC...AGACCTAGATGAGAGTCCATTTACTTCAGCCTTTGATTCAGTAAATGTTAAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR CCA 90 bp ATCATACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATTCGCTCTTCATTTCCTaGACGCCGGTTCCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: IIQNNLQPSKQLMHLLRDSLFIS*TPVPAG
Trigger: CCCAGCTGGAACCGGCGTCCAGGAAATGAAGAGCGA...ATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGTATGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp ACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTACCAATGGCTGCAGCTaGAGGGAGTTCTCGCTCTTC +
Preference number: 4 (lower is better)
Translates to: TKQSSAFKAADAPSQRSVTNGCS*REFSLF
Trigger: GAAGAGCGAGAACTCCCTCCAGCTGCAGCCATTGGT...AACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp ATGTCATGTATGGTAATCAGTCTATCTCCTAATGCAGGCTCACAAACTTCCACGCCAGGTGAGCCTGTGTaGTCTGTAGTCCTTGTCGAC +
Preference number: 4 (lower is better)
Translates to: MSCMVISLSPNAGSQTSTPGEPV*SVVLVD
Trigger: GTCGACAAGGACTACAGACCACACAGGCTCACCTGG...CGTGGAAGTTTGTGAGCCTGCATTAGGAGATAGACTGATTACCATACATGACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR CCA 90 bp AAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCCAGGTGAGCCTGTGTaGTCTGTAGTCCTTGTCGAC +
Preference number: 4 (lower is better)
Translates to: KQSSAFKAADAPSQRSVCPGEPV*SVVLVD
Trigger: GTCGACAAGGACTACAGACCACACAGGCTCACCTGG...ACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp AAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTGGACAGAGTCCTCATTaGCCAGGCTCAGGAGGTTCA +
Preference number: 4 (lower is better)
Translates to: KQSSAFKAADAPSQRSVCGQSPH*PGSGGS
Trigger: TGAACCTCCTGAGCCTGGCCAATGAGGACTCTGTCC...ACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp GCCCAAAGACGAGAGAACCTGCTTGTTAGCTCATTAACCTGTTTAGTAAAGATCGGACAGAGTCCTCATTaGCCAGGCTCAGGAGGTTCA +
Preference number: 4 (lower is better)
Translates to: AQRRENLLVSSLTCLVKIGQSPH*PGSGGS
Trigger: TGAACCTCCTGAGCCTGGCCAATGAGGACTCTGTCC...GATCTTTACTAAACAGGTTAATGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp GCCCAAAGACGAGAGAACCTGCTTGTTAGCTCATTAACCTGTTTAGTAAAGATCTGCCTTGGTGGGCCTTaGTCTTGGTCACTTTCGGTC +
Preference number: 4 (lower is better)
Translates to: AQRRENLLVSSLTCLVKICLGGP*SWSLSV
Trigger: GACCGAAAGTGACCAAGACCAAGGCCCACCAAGGCA...GATCTTTACTAAACAGGTTAATGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp ACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTAGTCTGCTGCCTTGGTaGGCCTTGGTCTTGGTCACT +
Preference number: 4 (lower is better)
Translates to: TKQSSAFKAADAPSQRSVSLLPW*ALVLVT
Trigger: AGTGACCAAGACCAAGGCCCACCAAGGCAGCAGACT...AACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp GCCCAAAGACGAGAGAACCTGCTTGTTAGCTCATTAACCTGTTTAGTAAAGATCAGTCTGCTGCCTTGGTaGGCCTTGGTCTTGGTCACT +
Preference number: 4 (lower is better)
Translates to: AQRRENLLVSSLTCLVKISLLPW*ALVLVT
Trigger: AGTGACCAAGACCAAGGCCCACCAAGGCAGCAGACT...GATCTTTACTAAACAGGTTAATGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp TCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCTGATTGGGAATCACTTGAACTaGGAGGTGGAGGTTGCAGTG +
Preference number: 4 (lower is better)
Translates to: SSAFKAADAPSQRSVCLIGNHLN*EVEVAV
Trigger: CACTGCAACCTCCACCTCCCAGTTCAAGTGATTCCC...AATCAGACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR CCA 90 bp GGAGCTCTGTCTGGGATTTCTGCAGTATATTATTTCGGAGGAGAAGAACCACCAAATCTAGTTTCTGGCTaGGCAGGGTGGTTCACGCTT +
Preference number: 4 (lower is better)
Translates to: GALSGISAVYYFGGEEPPNLVSG*AGWFTL
Trigger: AAGCGTGAACCACCCTGCCCAGCCAGAAACTAGATT...TGGTGGTTCTTCTCCTCCGAAATAATATACTGCAGAAATCCCAGACAGAGCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR CCA 90 bp TGGATGCGATGGCCTAGCATAGTGAACCTTTGGCCTTACCACAGCAGAAGCCCCCTGAGAAGAGGCCTTTaGAATAAGTTTCTAGCTTTA +
Preference number: 4 (lower is better)
Translates to: WMRWPSIVNLWPYHSRSPLRRGL*NKFLAL
Trigger: TAAAGCTAGAAACTTATTCCAAAGGCCTCTTCTCAG...GGGGCTTCTGCTGTGGTAAGGCCAAAGGTTCACTATGCTAGGCCATCGCATCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497580.5
CDS-3UTR TCA 90 bp TTAAAACATGGGAACCAAAGTTTGGCAACCTGGCCTCATTTCCTCCCACAGCTCGGATCTGTTTCCAGGTaGTCTTCATCTTCAACAAGC +
Preference number: 4 (lower is better)
Translates to: LKHGNQSLATWPHFLPQLGSVSR*SSSSTS
Trigger: GCTTGTTGAAGATGAAGATCACCTGGAAACAGATCC...GAGCTGTGGGAGGAAATGAGGCCAGGTTGCCAAACTTTGGTTCCCATGTTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR TCA 90 bp GTCTCCGGACAGAAGATACTATATCAGAGCTCCTGCTTCGAACTAGTCTCTCAGAAGAGTTTTTCCTGCTaGGATGGAGAGAACCTCTCA +
Preference number: 4 (lower is better)
Translates to: VSGQKILYQSSCFELVSQKSFSC*DGENLS
Trigger: TGAGAGGTTCTCTCCATCTCAGCAGGAAAAACTCTT...CTGAGAGACTAGTTCGAAGCAGGAGCTCTGATATAGTATCTTCTGTCCGGAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR TCA 90 bp CAGTGTCTATCACAGTGCCTCATGTGCAAGACACATCCACTCTCACAGGACTTCCTTGAACTTTTTGCCTaGATCTATCTGAGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: QCLSQCLMCKTHPLSQDFLELFA*IYLSPS
Trigger: AGAAGGGCTCAGATAGATTCAGGCAAAAAGTTCAAG...GAAGTCCTGTGAGAGTGGATGTGTCTTGCACATGAGGCACTGTGATAGACACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394084.5
CDS-3UTR TCA 90 bp CAGTGTCTATCACAGTGCCTCATGTGCAAGACACATCCACTCTCACAGGACTTCAGGGTTTTGTACATCTaGGACACGATCCACCTTAAA +
Preference number: 4 (lower is better)
Translates to: QCLSQCLMCKTHPLSQDFRVLYI*DTIHLK
Trigger: TTTAAGGTGGATCGTGTCTCAGATGTACAAAACCCT...GAAGTCCTGTGAGAGTGGATGTGTCTTGCACATGAGGCACTGTGATAGACACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394084.5
CDS-3UTR TCA 90 bp GATGCACCTTCTCAGAGATCTGTTTGTCTGATTAACAGTCTGCTGCCTTGGTGGCTATCTTCTCTCAGTTaGTCTCCAGACATCACACTC +
Preference number: 4 (lower is better)
Translates to: DAPSQRSVCLINSLLPWWLSSLS*SPDITL
Trigger: GAGTGTGATGTCTGGAGATCAACTGAGAGAAGATAG...CCACCAAGGCAGCAGACTGTTAATCAGACAAACAGATCTCTGAGAAGGTGCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp GGGTCACTCATGGGTCTCCGGACAGAAGATACTATATCAGAGCTCCTGCTTCGAAATGGTTTCTTGAGATaGTCCTTCATGGTCCATATG +
Preference number: 4 (lower is better)
Translates to: GSLMGLRTEDTISELLLRNGFLR*SFMVHM
Trigger: CATATGGACCATGAAGGATCATCTCAAGAAACCATT...TCGAAGCAGGAGCTCTGATATAGTATCTTCTGTCCGGAGACCCATGAGTGACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR TCA 90 bp GATGCACCTTCTCAGAGATCTGTTTGTCTGATTAACAGTCTGCTGCCTTGGTGGCTGTACCTAAGGAAATaGCCAACACCTCTTCTGGTT +
Preference number: 4 (lower is better)
Translates to: DAPSQRSVCLINSLLPWWLYLRK*PTPLLV
Trigger: AACCAGAAGAGGTGTTGGTCATTTCCTTAGGTACAG...CCACCAAGGCAGCAGACTGTTAATCAGACAAACAGATCTCTGAGAAGGTGCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp GCTTTGGTGTGCCTCCATGGCCAATTTTTCAGGCACCAAAACCCATTCCTGATTCTGTACCTAAGGAAATaGCCAACACCTCTTCTGGTT +
Preference number: 4 (lower is better)
Translates to: ALVCLHGQFFRHQNPFLILYLRK*PTPLLV
Trigger: AACCAGAAGAGGTGTTGGTCATTTCCTTAGGTACAG...AATCAGGAATGGGTTTTGGTGCCTGAAAAATTGGCCATGGAGGCACACCAAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR TCA 90 bp CTGGAGTTAAAACATGGGAACCAAAGTTTGGCAACCTGGCCTCATTTCCTCCCACTGTACCTAAGGAAATaGCCAACACCTCTTCTGGTT +
Preference number: 4 (lower is better)
Translates to: LELKHGNQSLATWPHFLPLYLRK*PTPLLV
Trigger: AACCAGAAGAGGTGTTGGTCATTTCCTTAGGTACAG...TGGGAGGAAATGAGGCCAGGTTGCCAAACTTTGGTTCCCATGTTTTAACTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR TCA 90 bp CTGCACTCAGATCTCAGGTCTTCAATCTTATTGGGAATATCCTCAGAGGTTGCAAGCTGGTGGGCACCGTaGGTTATTTCATCCATGTCT +
Preference number: 4 (lower is better)
Translates to: LHSDLRSSILLGISSEVASWWAP*VISSMS
Trigger: AGACATGGATGAAATAACTCACGGTGCCCACCAGCT...TGCAACCTCTGAGGATATTCCCAATAAGATTGAAGACCTGAGATCTGAGTGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR TCA 90 bp CAAGGTCTGTTCCTGTCTGATTTCTCATCATCGCTATCTTTGCGTTCTTCAGTCAGCTGGTGGGCACCGTaGGTTATTTCATCCATGTCT +
Preference number: 4 (lower is better)
Translates to: QGLFLSDFSSSLSLRSSVSWWAP*VISSMS
Trigger: AGACATGGATGAAATAACTCACGGTGCCCACCAGCT...GACTGAAGAACGCAAAGATAGCGATGATGAGAAATCAGACAGGAACAGACCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR TCA 90 bp GATGCACCTTCTCAGAGATCTGTTTGTCTGATTAACAGTCTGCTGCCTTGGTGGAAGAATGCCTTTGCTTaGATGCCTCCATTTCAGCTG +
Preference number: 4 (lower is better)
Translates to: DAPSQRSVCLINSLLPWWKNAFA*MPPFQL
Trigger: CAGCTGAAATGGAGGCATTCAAGCAAAGGCATTCTT...CCACCAAGGCAGCAGACTGTTAATCAGACAAACAGATCTCTGAGAAGGTGCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp TTAAAACATGGGAACCAAAGTTTGGCAACCTGGCCTCATTTCCTCCCACAGCTCAAGAATGCCTTTGCTTaGATGCCTCCATTTCAGCTG +
Preference number: 4 (lower is better)
Translates to: LKHGNQSLATWPHFLPQLKNAFA*MPPFQL
Trigger: CAGCTGAAATGGAGGCATTCAAGCAAAGGCATTCTT...GAGCTGTGGGAGGAAATGAGGCCAGGTTGCCAAACTTTGGTTCCCATGTTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR TCA 90 bp AAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTTTCAGTCTCTCCTCTTaGGGAGTCCTTACTCGGGGA +
Preference number: 4 (lower is better)
Translates to: KQSSAFKAADAPSQRSVCFSLSS*GVLTRG
Trigger: TCCCCGAGTAAGGACTCCTCAAGAGGAGAGACTGAA...ACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp TCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCTGATTTCAAAGGCTGATCACTaGATGCCAGCTACTTGGGAG +
Preference number: 4 (lower is better)
Translates to: SSAFKAADAPSQRSVCLISKADH*MPATWE
Trigger: CTCCCAAGTAGCTGGCATTCAGTGATCAGCCTTTGA...AATCAGACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000495955.5
CDS-3UTR TCA 90 bp ATGCAACTCAGAAAGGAAAGAGCCCAAAGACGAGAGAACCTGCTTGTTAGCTCAATAAGCGTTCCTGCTTaGGGTGATGAGCCAGAGTAT +
Preference number: 4 (lower is better)
Translates to: MQLRKERAQRRENLLVSSISVPA*GDEPEY
Trigger: ATACTCTGGCTCATCACCTCAAGCAGGAACGCTTAT...TGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGCTCTTTCCTTTCTGAGTTGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp ACAAAGTGCAAACAGACTTCACCTGCTCCAAGATCTTCTCCTGATACCACTACCATAAGCGTTCCTGCTTaGGGTGATGAGCCAGAGTAT +
Preference number: 4 (lower is better)
Translates to: TKCKQTSPAPRSSPDTTTISVPA*GDEPEY
Trigger: ATACTCTGGCTCATCACCTCAAGCAGGAACGCTTAT...GGTAGTGGTATCAGGAGAAGATCTTGGAGCAGGTGAAGTCTGTTTGCACTTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394084.5
CDS-3UTR TCA 90 bp GGAGCTCTGTCTGGGATTTCTGCAGTATATTATTTCGGAGGAGAAGAACCACCATCTGCATTGAGCCTCTaGATGAGCTGTTTCTCAGAG +
Preference number: 4 (lower is better)
Translates to: GALSGISAVYYFGGEEPPSALSL*MSCFSE
Trigger: CTCTGAGAAACAGCTCATTCAGAGGCTCAATGCAGA...TGGTGGTTCTTCTCCTCCGAAATAATATACTGCAGAAATCCCAGACAGAGCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR TCA 90 bp ATCATACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATTCTGTAAGAGAAAGCTaGATCCTGCGGGTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: IIQNNLQPSKQLMHLLRDSVRES*ILRVGC
Trigger: GCAGCCCACCCGCAGGATTCAGCTTTCTCTTACAGA...ATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGTATGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp TCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCTGATTAATAGCCTTTCCAGGTaGGCCTGTGTGGTCTGTAGT +
Preference number: 4 (lower is better)
Translates to: SSAFKAADAPSQRSVCLINSLSR*ACVVCS
Trigger: ACTACAGACCACACAGGCTCACCTGGAAAGGCTATT...AATCAGACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp GCCCAAAGACGAGAGAACCTGCTTGTTAGCTCATTAACCTGTTTAGTAAAGATCTCGCGTTTTGCCATATaGCATCCTGGGCCATTGCAC +
Preference number: 4 (lower is better)
Translates to: AQRRENLLVSSLTCLVKISRFAI*HPGPLH
Trigger: GTGCAATGGCCCAGGATGTCATATGGCAAAACGCGA...GATCTTTACTAAACAGGTTAATGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp ATCATACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATGCCAGCTGTGCATCTTaGAGCTGTTCTTCACTCGCG +
Preference number: 4 (lower is better)
Translates to: IIQNNLQPSKQLMHLLRDASCAS*SCSSLA
Trigger: CGCGAGTGAAGAACAGCTTCAAGATGCACAGCTGGC...ATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGTATGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp AAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTGGTAGAAGGCGAGCTTaGAAATCCGGTTCATCACGC +
Preference number: 4 (lower is better)
Translates to: KQSSAFKAADAPSQRSVCGRRRA*KSGSSR
Trigger: GCGTGATGAACCGGATTTTCAAGCTCGCCTTCTACC...ACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp GCCCAAAGACGAGAGAACCTGCTTGTTAGCTCATTAACCTGTTTAGTAAAGATCGGTAGAAGGCGAGCTTaGAAATCCGGTTCATCACGC +
Preference number: 4 (lower is better)
Translates to: AQRRENLLVSSLTCLVKIGRRRA*KSGSSR
Trigger: GCGTGATGAACCGGATTTTCAAGCTCGCCTTCTACC...GATCTTTACTAAACAGGTTAATGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp GCTTTGGTGTGCCTCCATGGCCAATTTTTCAGGCACCAAAACCCATTCCTGATTTATTGTCCTGATTTCTaGTTGTGCAGATGGCCATGG +
Preference number: 4 (lower is better)
Translates to: ALVCLHGQFFRHQNPFLIYCPDF*LCRWPW
Trigger: CCATGGCCATCTGCACAATCAGAAATCAGGACAATA...AATCAGGAATGGGTTTTGGTGCCTGAAAAATTGGCCATGGAGGCACACCAAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR TCA 90 bp TCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCTGATTAGCCTTCAAAGCAGCTaGTGCACCTTCTCAGAGATC +
Preference number: 4 (lower is better)
Translates to: SSAFKAADAPSQRSVCLISLQSS*CTFSEI
Trigger: GATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCT...AATCAGACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp ATGCAACTCAGAAAGGAAAGAGCCCAAAGACGAGAGAACCTGCTTGTTAGCTCAAGTGAAACCAGACAGTaGTGGCCCATGTACAAGACT +
Preference number: 4 (lower is better)
Translates to: MQLRKERAQRRENLLVSSSETRQ*WPMYKT
Trigger: AGTCTTGTACATGGGCCATCACTGTCTGGTTTCACT...TGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGCTCTTTCCTTTCTGAGTTGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR TCA 90 bp ACACACGAAGTGAAACCAGACAGTGATGGCCCATGTACAAGACTTGTGCTTGAAAGTGAAACCAGACAGTaGTGGCCCATGTACAAGACT +
Preference number: 4 (lower is better)
Translates to: THEVKPDSDGPCTRLVLESETRQ*WPMYKT
Trigger: AGTCTTGTACATGGGCCATCACTGTCTGGTTTCACT...TTCAAGCACAAGTCTTGTACATGGGCCATCACTGTCTGGTTTCACTTCGTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR TCA 90 bp TCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCTGATTAGGAAACACACGAAGTaGAACCAGACAGTGATGGCC +
Preference number: 4 (lower is better)
Translates to: SSAFKAADAPSQRSVCLIRKHTK*NQTVMA
Trigger: GGCCATCACTGTCTGGTTTCACTTCGTGTGTTTCCT...AATCAGACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR TCA 90 bp ACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTACGAGGTCAGGAGATTaGGGATCATCCTGGCCAACA +
Preference number: 4 (lower is better)
Translates to: TKQSSAFKAADAPSQRSVTRSGD*GSSWPT
Trigger: TGTTGGCCAGGATGATCCTCAATCTCCTGACCTCGT...AACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR TCA 90 bp ATGTCATGTATGGTAATCAGTCTATCTCCTAATGCAGGCTCACAAACTTCCACGACGAGGTCAGGAGATTaGGGATCATCCTGGCCAACA +
Preference number: 4 (lower is better)
Translates to: MSCMVISLSPNAGSQTSTTRSGD*GSSWPT
Trigger: TGTTGGCCAGGATGATCCTCAATCTCCTGACCTCGT...CGTGGAAGTTTGTGAGCCTGCATTAGGAGATAGACTGATTACCATACATGACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR TCA 90 bp ACACACGAAGTGAAACCAGACAGTGATGGCCCATGTACAAGACTTGTGCTTGAAGACAGTTACAGCCAATaGAGTGCACGACTCTGTACA +
Preference number: 4 (lower is better)
Translates to: THEVKPDSDGPCTRLVLEDSYSQ*SARLCT
Trigger: TGTACAGAGTCGTGCACTTCATTGGCTGTAACTGTC...TTCAAGCACAAGTCTTGTACATGGGCCATCACTGTCTGGTTTCACTTCGTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR TCA 90 bp AGTAATCGCAAATACCTCATCACTGTTAATCCACTTACTAAAAATCCTTTGGGCGGTAGGCGGATCACTTaGGGCCAGGAGTTCGAGACC +
Preference number: 4 (lower is better)
Translates to: SNRKYLITVNPLTKNPLGGRRIT*GQEFET
Trigger: GGTCTCGAACTCCTGGCCTCAAGTGATCCGCCTACC...GCCCAAAGGATTTTTAGTAAGTGGATTAACAGTGATGAGGTATTTGCGATTACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR TCA 90 bp GGAGCTCTGTCTGGGATTTCTGCAGTATATTATTTCGGAGGAGAAGAACCACCAAGACGTCATCTCTCTTaGATTGAACCCTTGCTGAGC +
Preference number: 4 (lower is better)
Translates to: GALSGISAVYYFGGEEPPRRHLS*IEPLLS
Trigger: GCTCAGCAAGGGTTCAATTCAAGAGAGATGACGTCT...TGGTGGTTCTTCTCCTCCGAAATAATATACTGCAGAAATCCCAGACAGAGCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR TCA 90 bp CTGGTGGGCACCGTGAGTTATTTCATCCATGTCTGGACTAGTGACAGAATCTTTGAGACATTGGCTCTCTaGAAGAGATTCTGGGGCTTT +
Preference number: 4 (lower is better)
Translates to: LVGTVSYFIHVWTSDRIFETLAL*KRFWGF
Trigger: AAAGCCCCAGAATCTCTTTCAGAGAGCCAATGTCTC...AAAGATTCTGTCACTAGTCCAGACATGGATGAAATAACTCACGGTGCCCACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497580.5
CDS-3UTR TCA 90 bp TTAAAACATGGGAACCAAAGTTTGGCAACCTGGCCTCATTTCCTCCCACAGCTCTTTTGCCAACTCAAATaGTGCCAGGCTGTTCACCAA +
Preference number: 4 (lower is better)
Translates to: LKHGNQSLATWPHFLPQLFCQLK*CQAVHQ
Trigger: TTGGTGAACAGCCTGGCATCATTTGAGTTGGCAAAA...GAGCTGTGGGAGGAAATGAGGCCAGGTTGCCAAACTTTGGTTCCCATGTTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497580.5
CDS-3UTR GCA 90 bp TCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCTGATTGAGATCAGTACACATTaGCCTGACCTCCCCAACTTC +
Preference number: 4 (lower is better)
Translates to: SSAFKAADAPSQRSVCLIEISTH*PDLPNF
Trigger: GAAGTTGGGGAGGTCAGGGCAATGTGTACTGATCTC...AATCAGACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp GTCTCCGGACAGAAGATACTATATCAGAGCTCCTGCTTCGAACTAGTCTCTCAGTTCTGGATTGACAACTaGAGGACAAATGAAGCAGGC +
Preference number: 4 (lower is better)
Translates to: VSGQKILYQSSCFELVSQFWIDN*RTNEAG
Trigger: GCCTGCTTCATTTGTCCTGCAGTTGTCAATCCAGAA...CTGAGAGACTAGTTCGAAGCAGGAGCTCTGATATAGTATCTTCTGTCCGGAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR GCA 90 bp TTAAAACATGGGAACCAAAGTTTGGCAACCTGGCCTCATTTCCTCCCACAGCTCTTCTGGATTGACAACTaGAGGACAAATGAAGCAGGC +
Preference number: 4 (lower is better)
Translates to: LKHGNQSLATWPHFLPQLFWIDN*RTNEAG
Trigger: GCCTGCTTCATTTGTCCTGCAGTTGTCAATCCAGAA...GAGCTGTGGGAGGAAATGAGGCCAGGTTGCCAAACTTTGGTTCCCATGTTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR GCA 90 bp TCCTCCGCCAGCTATGGAGTCATGAGCACCCGAACCCATTTCACAGGTGTCACACATCAGATTAAATCGTaGTACTTCATTAATAGGAGC +
Preference number: 4 (lower is better)
Translates to: SSASYGVMSTRTHFTGVTHQIKS*YFINRS
Trigger: GCTCCTATTAATGAAGTAGCACGATTTAATCTGATG...TGTGACACCTGTGAAATGGGTTCGGGTGCTCATGACTCCATAGCTGGCGGAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR GCA 90 bp GATGCACCTTCTCAGAGATCTGTTTGTCTGATTAACAGTCTGCTGCCTTGGTGGAAAAGGCGGCCTACCTaGATCAGATTAAATCGTGCT +
Preference number: 4 (lower is better)
Translates to: DAPSQRSVCLINSLLPWWKRRPT*IRLNRA
Trigger: AGCACGATTTAATCTGATGCAGGTAGGCCGCCTTTT...CCACCAAGGCAGCAGACTGTTAATCAGACAAACAGATCTCTGAGAAGGTGCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp GCCCAAAGACGAGAGAACCTGCTTGTTAGCTCATTAACCTGTTTAGTAAAGATCCCAGTCATTGCTAACTaGTGCAAAAGGCGGCCTACC +
Preference number: 4 (lower is better)
Translates to: AQRRENLLVSSLTCLVKIPVIAN*CKRRPT
Trigger: GGTAGGCCGCCTTTTGCAGCAGTTAGCAATGACTGG...GATCTTTACTAAACAGGTTAATGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp TTGTATCCAGTGTCTATCACAGTGCCTCATGTGCAAGACACATCCACTCTCACACAAACTTTCCAAGGCTaGTCTTTGTTCGGGGATCTC +
Preference number: 4 (lower is better)
Translates to: LYPVSITVPHVQDTSTLTQTFQG*SLFGDL
Trigger: GAGATCCCCGAACAAAGAGCAGCCTTGGAAAGTTTG...TGTGAGAGTGGATGTGTCTTGCACATGAGGCACTGTGATAGACACTGGATACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394084.5
CDS-3UTR GCA 90 bp GATGCACCTTCTCAGAGATCTGTTTGTCTGATTAACAGTCTGCTGCCTTGGTGGCCTCCATCCGAAAGCTaGATGTTTAGGACCTCATTT +
Preference number: 4 (lower is better)
Translates to: DAPSQRSVCLINSLLPWWPPSES*MFRTSF
Trigger: AAATGAGGTCCTAAACATGCAGCTTTCGGATGGAGG...CCACCAAGGCAGCAGACTGTTAATCAGACAAACAGATCTCTGAGAAGGTGCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp TGTTCCTGTCTGATTTCTCATCATCGCTATCTTTGCGTTCTTCAGTCTCTCCTCCTCTGCTGCAGCACCTaGAATTTCTTGCAAGCGATC +
Preference number: 4 (lower is better)
Translates to: CSCLISHHRYLCVLQSLLLCCST*NFLQAI
Trigger: GATCGCTTGCAAGAAATTGCAGGTGCTGCAGCAGAG...GAGGAGAGACTGAAGAACGCAAAGATAGCGATGATGAGAAATCAGACAGGAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR GCA 90 bp GTAGTACTAGTCTCTACTTGGGGACAAGAAAATAGAATATGCAACTCAGAAAGGTGCAGACGCTCCTCCTaGTTTAGGTCTGGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: VVLVSTWGQENRICNSERCRRSS*FRSGAS
Trigger: AGAGGCCCCAGACCTAAAGCAGGAGGAGCGTCTGCA...CCTTTCTGAGTTGCATATTCTATTTTCTTGTCCCCAAGTAGAGACTAGTACTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp CGTTCTTCAGTCTCTCCTCTTGAGGAGTCCTTACTCGGGGATGAAGATGATGAACTATATCAGAGCTCCTaGTTCGAACTAGTCTCTCAG +
Preference number: 4 (lower is better)
Translates to: RSSVSPLEESLLGDEDDELYQSS*FELVSQ
Trigger: CTGAGAGACTAGTTCGAAGCAGGAGCTCTGATATAG...TTCATCATCTTCATCCCCGAGTAAGGACTCCTCAAGAGGAGAGACTGAAGAACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR GCA 90 bp ATCATACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATAGTAGCACCAATGGCTaGAGCTGGAGGGAGTTCTCG +
Preference number: 4 (lower is better)
Translates to: IIQNNLQPSKQLMHLLRDSSTNG*SWREFS
Trigger: CGAGAACTCCCTCCAGCTGCAGCCATTGGTGCTACT...ATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGTATGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp CACCACTATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCAAGTAGCACCAATGGCTaGAGCTGGAGGGAGTTCTCG +
Preference number: 4 (lower is better)
Translates to: HHYSNPQCNSYLLSIRCSSSTNG*SWREFS
Trigger: CGAGAACTCCCTCCAGCTGCAGCCATTGGTGCTACT...TGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATAGTGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp GCTTTGGTGTGCCTCCATGGCCAATTTTTCAGGCACCAAAACCCATTCCTGATTCATCATCGCTATCTTTaGGTTCTTCAGTCTCTCCTC +
Preference number: 4 (lower is better)
Translates to: ALVCLHGQFFRHQNPFLIHHRYL*VLQSLL
Trigger: GAGGAGAGACTGAAGAACGCAAAGATAGCGATGATG...AATCAGGAATGGGTTTTGGTGCCTGAAAAATTGGCCATGGAGGCACACCAAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR GCA 90 bp TTAAAACATGGGAACCAAAGTTTGGCAACCTGGCCTCATTTCCTCCCACAGCTCCATCATCGCTATCTTTaGGTTCTTCAGTCTCTCCTC +
Preference number: 4 (lower is better)
Translates to: LKHGNQSLATWPHFLPQLHHRYL*VLQSLL
Trigger: GAGGAGAGACTGAAGAACGCAAAGATAGCGATGATG...GAGCTGTGGGAGGAAATGAGGCCAGGTTGCCAAACTTTGGTTCCCATGTTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR GCA 90 bp GCCCAAAGACGAGAGAACCTGCTTGTTAGCTCATTAACCTGTTTAGTAAAGATCCAGCTCTCCAGTTCTTaGAGACGCTCCTCCTGCTTT +
Preference number: 4 (lower is better)
Translates to: AQRRENLLVSSLTCLVKIQLSSS*RRSSCF
Trigger: AAAGCAGGAGGAGCGTCTGCAAGAACTGGAGAGCTG...GATCTTTACTAAACAGGTTAATGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp ACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTCAGCTCTCCAGTTCTTaGAGACGCTCCTCCTGCTTT +
Preference number: 4 (lower is better)
Translates to: TKQSSAFKAADAPSQRSVQLSSS*RRSSCF
Trigger: AAAGCAGGAGGAGCGTCTGCAAGAACTGGAGAGCTG...AACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp CCCAAAATCAGAGCTGCACTCAGATCTCAGGTCTTCAATCTTATTGGGAATATCCAGCTCTCCAGTTCTTaGAGACGCTCCTCCTGCTTT +
Preference number: 4 (lower is better)
Translates to: PKIRAALRSQVFNLIGNIQLSSS*RRSSCF
Trigger: AAAGCAGGAGGAGCGTCTGCAAGAACTGGAGAGCTG...GATATTCCCAATAAGATTGAAGACCTGAGATCTGAGTGCAGCTCTGATTTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497580.5
CDS-3UTR GCA 90 bp GGAGCTCTGTCTGGGATTTCTGCAGTATATTATTTCGGAGGAGAAGAACCACCATTCATAGTTTGCCATTaGTCCATCACTGGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: GALSGISAVYYFGGEEPPFIVCH*SITGAG
Trigger: ACCAGCCCCAGTGATGGAGCAATGGCAAACTATGAA...TGGTGGTTCTTCTCCTCCGAAATAATATACTGCAGAAATCCCAGACAGAGCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR GCA 90 bp ATGCAACTCAGAAAGGAAAGAGCCCAAAGACGAGAGAACCTGCTTGTTAGCTCAACGGGGAGAATCATGTaGACTTTCACCATCACCCAT +
Preference number: 4 (lower is better)
Translates to: MQLRKERAQRRENLLVSSTGRIM*TFTITH
Trigger: ATGGGTGATGGTGAAAGTGCACATGATTCTCCCCGT...TGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGCTCTTTCCTTTCTGAGTTGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp AAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCGAGATGTTCTGCAGTaGTTCGTCACGGGGAGAATC +
Preference number: 4 (lower is better)
Translates to: KQSSAFKAADAPSQRSVCRDVLQ*FVTGRI
Trigger: GATTCTCCCCGTGACGAAGCACTGCAGAACATCTCG...ACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp CACCACTATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCATCAGCCGAGATGTTCTaGAGTGCTTCGTCACGGGGA +
Preference number: 4 (lower is better)
Translates to: HHYSNPQCNSYLLSIRCSSAEMF*SASSRG
Trigger: TCCCCGTGACGAAGCACTGCAGAACATCTCGGCTGA...TGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATAGTGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp ATCATACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATTCAGCCGAGATGTTCTaGAGTGCTTCGTCACGGGGA +
Preference number: 4 (lower is better)
Translates to: IIQNNLQPSKQLMHLLRDSAEMF*SASSRG
Trigger: TCCCCGTGACGAAGCACTGCAGAACATCTCGGCTGA...ATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGTATGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp CACCACTATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCAGTGGGCTGCTTGGCTTaGAGAGTCTGGGAGATCATC +
Preference number: 4 (lower is better)
Translates to: HHYSNPQCNSYLLSIRCSVGCLA*RVWEII
Trigger: GATGATCTCCCAGACTCTGCAAGCCAAGCAGCCCAC...TGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATAGTGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp ATCATACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATGAGAAAGCTGAATCCTaGGGGTGGGCTGCTTGGCTT +
Preference number: 4 (lower is better)
Translates to: IIQNNLQPSKQLMHLLRDEKAES*GWAAWL
Trigger: AAGCCAAGCAGCCCACCCGCAGGATTCAGCTTTCTC...ATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGTATGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp ATGCAACTCAGAAAGGAAAGAGCCCAAAGACGAGAGAACCTGCTTGTTAGCTCACTCAATGGCCAGCTGTaGATCTTGAAGCTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: MQLRKERAQRRENLLVSSLNGQL*ILKLFF
Trigger: GAAGAACAGCTTCAAGATGCACAGCTGGCCATTGAG...TGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGCTCTTTCCTTTCTGAGTTGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp GGAGCTCTGTCTGGGATTTCTGCAGTATATTATTTCGGAGGAGAAGAACCACCATGCAGATGGCCATGGTaGTTCTCGAAGATAAACCTC +
Preference number: 4 (lower is better)
Translates to: GALSGISAVYYFGGEEPPCRWPW*FSKINL
Trigger: GAGGTTTATCTTCGAGAAGCACCATGGCCATCTGCA...TGGTGGTTCTTCTCCTCCGAAATAATATACTGCAGAAATCCCAGACAGAGCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR GCA 90 bp GCTTTGGTGTGCCTCCATGGCCAATTTTTCAGGCACCAAAACCCATTCCTGATTCTTGAAGCTTTGGTGTaGCTCCATGGCCAATTTTTC +
Preference number: 4 (lower is better)
Translates to: ALVCLHGQFFRHQNPFLILEALV*LHGQFF
Trigger: GAAAAATTGGCCATGGAGGCACACCAAAGCTTCAAG...AATCAGGAATGGGTTTTGGTGCCTGAAAAATTGGCCATGGAGGCACACCAAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR GCA 90 bp GATGCACCTTCTCAGAGATCTGTTTGTCTGATTAACAGTCTGCTGCCTTGGTGGCTTGAAGCTTTGGTGTaGCTCCATGGCCAATTTTTC +
Preference number: 4 (lower is better)
Translates to: DAPSQRSVCLINSLLPWWLEALV*LHGQFF
Trigger: GAAAAATTGGCCATGGAGGCACACCAAAGCTTCAAG...CCACCAAGGCAGCAGACTGTTAATCAGACAAACAGATCTCTGAGAAGGTGCATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR GCA 90 bp GATGCACCTTCTCAGAGATCTGTTTGTCTGATTAACAGTCTGCTGCCTTGGTGGCATGTACAAGACTTGTaGTTGAAGCTTTGGTGTGCC +
Preference number: 4 (lower is better)
Translates to: DAPSQRSVCLINSLLPWWHVQDL*LKLWCA
Trigger: GGCACACCAAAGCTTCAAGCACAAGTCTTGTACATG...CCACCAAGGCAGCAGACTGTTAATCAGACAAACAGATCTCTGAGAAGGTGCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR GCA 90 bp CACCACTATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCACACAGCCCTATCTCCTaGCTCCAGTGTAGCCCTTCA +
Preference number: 4 (lower is better)
Translates to: HHYSNPQCNSYLLSIRCSHSPIS*LQCSPS
Trigger: TGAAGGGCTACACTGGAGGCAGGAGATAGGGCTGTG...TGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATAGTGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR GCA 90 bp GCCCAAAGACGAGAGAACCTGCTTGTTAGCTCATTAACCTGTTTAGTAAAGATCAGAGGAAACCTTAGCTaGCCCTGCAACAGCTGTGCT +
Preference number: 4 (lower is better)
Translates to: AQRRENLLVSSLTCLVKIRGNLS*PCNSCA
Trigger: AGCACAGCTGTTGCAGGGGCAGCTAAGGTTTCCTCT...GATCTTTACTAAACAGGTTAATGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR GCA 90 bp CGTTCTTCAGTCTCTCCTCTTGAGGAGTCCTTACTCGGGGATGAAGATGATGAAAATATCCTCAGAGGTTaGACTTATGCCTCCCTGACA +
Preference number: 4 (lower is better)
Translates to: RSSVSPLEESLLGDEDDENILRG*TYASLT
Trigger: TGTCAGGGAGGCATAAGTGCAACCTCTGAGGATATT...TTCATCATCTTCATCCCCGAGTAAGGACTCCTCAAGAGGAGAGACTGAAGAACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497580.5
CDS-3UTR CCA 90 bp GCCCAAAGACGAGAGAACCTGCTTGTTAGCTCATTAACCTGTTTAGTAAAGATCATTGACGGAAGACAATaGAGGGGTCTCCACTGCACG +
Preference number: 4 (lower is better)
Translates to: AQRRENLLVSSLTCLVKIIDGRQ*RGLHCT
Trigger: CGTGCAGTGGAGACCCCTCCATTGTCTTCCGTCAAT...GATCTTTACTAAACAGGTTAATGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp CCAAAATCAGAGCTGCACTCAGATCTCAGGTCTTCAATCTTATTGGGAATATCCATTGACGGAAGACAATaGAGGGGTCTCCACTGCACG +
Preference number: 4 (lower is better)
Translates to: PKSELHSDLRSSILLGISIDGRQ*RGLHCT
Trigger: CGTGCAGTGGAGACCCCTCCATTGTCTTCCGTCAAT...GGATATTCCCAATAAGATTGAAGACCTGAGATCTGAGTGCAGCTCTGATTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR CCA 90 bp CCAAAATCAGAGCTGCACTCAGATCTCAGGTCTTCAATCTTATTGGGAATATCCTACTTTTTCCTGGCTTaGCCGGGGGTAGGTTTGCCA +
Preference number: 4 (lower is better)
Translates to: PKSELHSDLRSSILLGISYFFLA*PGVGLP
Trigger: TGGCAAACCTACCCCCGGCCAAGCCAGGAAAAAGTA...GGATATTCCCAATAAGATTGAAGACCTGAGATCTGAGTGCAGCTCTGATTTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR CCA 90 bp TCTCTCCTCTTGAGGAGTCCTTACTCGGGGATGAAGATGATGAATGAGGTGCAGTTTTATTTGCTGGAGTaGTTGCTGGAGATAGCTGAG +
Preference number: 4 (lower is better)
Translates to: SLLLRSPYSGMKMMNEVQFYLLE*LLEIAE
Trigger: CTCAGCTATCTCCAGCAACCACTCCAGCAAATAAAA...CTGCACCTCATTCATCATCTTCATCCCCGAGTAAGGACTCCTCAAGAGGAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR CCA 90 bp AAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTGGTCCATTAGCATATTaGTGCGGCTTCTGCTCCGAG +
Preference number: 4 (lower is better)
Translates to: KQSSAFKAADAPSQRSVCGPLAY*CGFCSE
Trigger: CTCGGAGCAGAAGCCGCACCAATATGCTAATGGACC...ACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp GCCCAAAGACGAGAGAACCTGCTTGTTAGCTCATTAACCTGTTTAGTAAAGATCGGTCCATTAGCATATTaGTGCGGCTTCTGCTCCGAG +
Preference number: 4 (lower is better)
Translates to: AQRRENLLVSSLTCLVKIGPLAY*CGFCSE
Trigger: CTCGGAGCAGAAGCCGCACCAATATGCTAATGGACC...GATCTTTACTAAACAGGTTAATGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp ACCAAGGTCTGTTCCTGTCTGATTTCTCATCATCGCTATCTTTGCGTTCTTCAGGACCAACACCTCTTCTaGTTGCACCTCCTGAATGGT +
Preference number: 4 (lower is better)
Translates to: TKVCSCLISHHRYLCVLQDQHLF*LHLLNG
Trigger: ACCATTCAGGAGGTGCAACCAGAAGAGGTGTTGGTC...CTGAAGAACGCAAAGATAGCGATGATGAGAAATCAGACAGGAACAGACCTTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR CCA 90 bp ATGCAACTCAGAAAGGAAAGAGCCCAAAGACGAGAGAACCTGCTTGTTAGCTCAACAGTGGATCAAACATaGCCAGCAGAGACTCTGACT +
Preference number: 4 (lower is better)
Translates to: MQLRKERAQRRENLLVSSTVDQT*PAETLT
Trigger: AGTCAGAGTCTCTGCTGGCCATGTTTGATCCACTGT...TGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGCTCTTTCCTTTCTGAGTTGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp AAGCTCTGCCTTAGCATTCATCTGAGTGGAACCACTTTCTACACCCTCAAAGTATGGTGGTGGATGCGATaGCCTAGCATAGTGAACCTT +
Preference number: 4 (lower is better)
Translates to: KLCLSIHLSGTTFYTLKVWWWMR*PSIVNL
Trigger: AAGGTTCACTATGCTAGGCCATCGCATCCACCACCA...TACTTTGAGGGTGTAGAAAGTGGTTCCACTCAGATGAATGCTAAGGCAGAGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497580.5
CDS-3UTR CCA 90 bp ATCATACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATTGGGGGATCTGGTGGTaGATGCGATGGCCTAGCATA +
Preference number: 4 (lower is better)
Translates to: IIQNNLQPSKQLMHLLRDWGIWW*MRWPSI
Trigger: TATGCTAGGCCATCGCATCCACCACCAGATCCCCCA...ATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGTATGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp GTAGTACTAGTCTCTACTTGGGGACAAGAAAATAGAATATGCAACTCAGAAAGGGATTGGGGGATCTGGTaGTGGATGCGATGGCCTAGC +
Preference number: 4 (lower is better)
Translates to: VVLVSTWGQENRICNSERDWGIW*WMRWPS
Trigger: GCTAGGCCATCGCATCCACCACCAGATCCCCCAATC...CCTTTCTGAGTTGCATATTCTATTTTCTTGTCCCCAAGTAGAGACTAGTACTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp ATCATACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATAGCTCCTTCCAGGATTaGGGGATCTGGTGGTGGATG +
Preference number: 4 (lower is better)
Translates to: IIQNNLQPSKQLMHLLRDSSFQD*GIWWWM
Trigger: CATCCACCACCAGATCCCCCAATCCTGGAAGGAGCT...ATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGTATGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp ACACACGAAGTGAAACCAGACAGTGATGGCCCATGTACAAGACTTGTGCTTGAAATGGGAACCAAAGTTTaGCAACCTGGCCTCATTTCC +
Preference number: 4 (lower is better)
Translates to: THEVKPDSDGPCTRLVLEMGTKV*QPGLIS
Trigger: GGAAATGAGGCCAGGTTGCCAAACTTTGGTTCCCAT...TTCAAGCACAAGTCTTGTACATGGGCCATCACTGTCTGGTTTCACTTCGTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR CCA 90 bp AAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTAGCTGGGGTCACTCATaGGTCTCCGGACAGAAGATA +
Preference number: 4 (lower is better)
Translates to: KQSSAFKAADAPSQRSVCSWGHS*VSGQKI
Trigger: TATCTTCTGTCCGGAGACCCATGAGTGACCCCAGCT...ACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp GCCCAAAGACGAGAGAACCTGCTTGTTAGCTCATTAACCTGTTTAGTAAAGATCAGCTGGGGTCACTCATaGGTCTCCGGACAGAAGATA +
Preference number: 4 (lower is better)
Translates to: AQRRENLLVSSLTCLVKISWGHS*VSGQKI
Trigger: TATCTTCTGTCCGGAGACCCATGAGTGACCCCAGCT...GATCTTTACTAAACAGGTTAATGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp GTAGTACTAGTCTCTACTTGGGGACAAGAAAATAGAATATGCAACTCAGAAAGGTCGCTCTTCATTTCCTaGACGCCGGTTCCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: VVLVSTWGQENRICNSERSLFIS*TPVPAG
Trigger: CCCAGCTGGAACCGGCGTCCAGGAAATGAAGAGCGA...CCTTTCTGAGTTGCATATTCTATTTTCTTGTCCCCAAGTAGAGACTAGTACTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp CACCACTATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCAACCAATGGCTGCAGCTaGAGGGAGTTCTCGCTCTTC +
Preference number: 4 (lower is better)
Translates to: HHYSNPQCNSYLLSIRCSTNGCS*REFSLF
Trigger: GAAGAGCGAGAACTCCCTCCAGCTGCAGCCATTGGT...TGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATAGTGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp TCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCTGATTTTGGCTTGCAGAGTCTaGGAGATCATCAGCCGAGAT +
Preference number: 4 (lower is better)
Translates to: SSAFKAADAPSQRSVCLILACRV*EIISRD
Trigger: ATCTCGGCTGATGATCTCCCAGACTCTGCAAGCCAA...AATCAGACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp CACCACTATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCAGGACAGAGTCCTCATTaGCCAGGCTCAGGAGGTTCA +
Preference number: 4 (lower is better)
Translates to: HHYSNPQCNSYLLSIRCSGQSPH*PGSGGS
Trigger: TGAACCTCCTGAGCCTGGCCAATGAGGACTCTGTCC...TGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATAGTGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp AAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTGGTGGGCCTTGGTCTTaGTCACTTTCGGTCATCGAT +
Preference number: 4 (lower is better)
Translates to: KQSSAFKAADAPSQRSVCGGPWS*SLSVID
Trigger: ATCGATGACCGAAAGTGACCAAGACCAAGGCCCACC...ACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp ACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTGGTGGGCCTTGGTCTTaGTCACTTTCGGTCATCGAT +
Preference number: 4 (lower is better)
Translates to: TKQSSAFKAADAPSQRSVGGPWS*SLSVID
Trigger: ATCGATGACCGAAAGTGACCAAGACCAAGGCCCACC...AACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp ATGCAACTCAGAAAGGAAAGAGCCCAAAGACGAGAGAACCTGCTTGTTAGCTCATTGTGCTTGAAGCTTTaGTGTGCCTCCATGGCCAAT +
Preference number: 4 (lower is better)
Translates to: MQLRKERAQRRENLLVSSLCLKL*CASMAN
Trigger: ATTGGCCATGGAGGCACACCAAAGCTTCAAGCACAA...TGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGCTCTTTCCTTTCTGAGTTGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR CCA 90 bp AAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTGGGAATCACTTGAACTaGGAGGTGGAGGTTGCAGTG +
Preference number: 4 (lower is better)
Translates to: KQSSAFKAADAPSQRSVCGNHLN*EVEVAV
Trigger: CACTGCAACCTCCACCTCCCAGTTCAAGTGATTCCC...ACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR CCA 90 bp GCTTTGGTGTGCCTCCATGGCCAATTTTTCAGGCACCAAAACCCATTCCTGATTCAGAAATCACACAGCTaGCCTCGTGATGTATTTACG +
Preference number: 4 (lower is better)
Translates to: ALVCLHGQFFRHQNPFLIQKSHS*PRDVFT
Trigger: CGTAAATACATCACGAGGCCAGCTGTGTGATTTCTG...AATCAGGAATGGGTTTTGGTGCCTGAAAAATTGGCCATGGAGGCACACCAAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR CCA 90 bp ACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTAATTCCCCTAGTGCATaGCCGCTACCCACACTGTCT +
Preference number: 4 (lower is better)
Translates to: TKQSSAFKAADAPSQRSVNSPSA*PLPTLS
Trigger: AGACAGTGTGGGTAGCGGCCATGCACTAGGGGAATT...AACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
3UTR CAA 72 bp AACCAGACAGTGATGGCCCATGTACAAGACTTGTGCTaGAAGCTTTGGTGTGCCTCCATGGCCAATTTTTCA +
Preference number: 4 (lower is better)
Translates to: NQTVMAHVQDLC*KLWCASMANFS
Trigger: TGAAAAATTGGCCATGGAGGCACACCAAAGCTTCAAGCACAAGTCTTGTACATGGGCCATCACTGTCTGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
3UTR CAA 72 bp GCTAGAAACTTAAGCCCAGCAAGTCTTACAGAGGAGTaGAGACATTGGCTCTCTGAAAGAGATTCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: ARNLSPASLTEE*RHWLSERDSGA
Trigger: AGCCCCAGAATCTCTTTCAGAGAGCCAATGTCTCAACTCCTCTGTAAGACTTGCTGGGCTTAAGTTTCTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497580.5
CDS-3UTR TCA 90 bp CTGGAGTTAAAACATGGGAACCAAAGTTTGGCAACCTGGCCTCATTTCCTCCCATTTCATCTTCTTGCATaGTGCAATTGCCATACAGGG +
Preference number: 4 (lower is better)
Translates to: LELKHGNQSLATWPHFLPFHLLA*CNCHTG
Trigger: CCCTGTATGGCAATTGCATCATGCAAGAAGATGAAA...TGGGAGGAAATGAGGCCAGGTTGCCAAACTTTGGTTCCCATGTTTTAACTCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR TCA 90 bp GCTTTGGTGTGCCTCCATGGCCAATTTTTCAGGCACCAAAACCCATTCCTGATTTTTCATCTTCTTGCATaGTGCAATTGCCATACAGGG +
Preference number: 4 (lower is better)
Translates to: ALVCLHGQFFRHQNPFLIFHLLA*CNCHTG
Trigger: CCCTGTATGGCAATTGCATCATGCAAGAAGATGAAA...AATCAGGAATGGGTTTTGGTGCCTGAAAAATTGGCCATGGAGGCACACCAAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR TCA 90 bp GATGCACCTTCTCAGAGATCTGTTTGTCTGATTAACAGTCTGCTGCCTTGGTGGTTTCATCTTCTTGCATaGTGCAATTGCCATACAGGG +
Preference number: 4 (lower is better)
Translates to: DAPSQRSVCLINSLLPWWFHLLA*CNCHTG
Trigger: CCCTGTATGGCAATTGCATCATGCAAGAAGATGAAA...CCACCAAGGCAGCAGACTGTTAATCAGACAAACAGATCTCTGAGAAGGTGCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp TGTATCCAGTGTCTATCACAGTGCCTCATGTGCAAGACACATCCACTCTCACAGTTTCATCTTCTTGCATaGTGCAATTGCCATACAGGG +
Preference number: 4 (lower is better)
Translates to: CIQCLSQCLMCKTHPLSQFHLLA*CNCHTG
Trigger: CCCTGTATGGCAATTGCATCATGCAAGAAGATGAAA...CTGTGAGAGTGGATGTGTCTTGCACATGAGGCACTGTGATAGACACTGGATACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394084.5
CDS-3UTR TCA 90 bp GCTTTGGTGTGCCTCCATGGCCAATTTTTCAGGCACCAAAACCCATTCCTGATTCATGTAAAGTGGCTGTaGGGAAAAGTTTGGCAGAAA +
Preference number: 4 (lower is better)
Translates to: ALVCLHGQFFRHQNPFLIHVKWL*GKVWQK
Trigger: TTTCTGCCAAACTTTTCCTCACAGCCACTTTACATG...AATCAGGAATGGGTTTTGGTGCCTGAAAAATTGGCCATGGAGGCACACCAAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR TCA 90 bp ATGCAACTCAGAAAGGAAAGAGCCCAAAGACGAGAGAACCTGCTTGTTAGCTCAGGATCTGTTTCCAGGTaGTCTTCATCTTCAACAAGC +
Preference number: 4 (lower is better)
Translates to: MQLRKERAQRRENLLVSSGSVSR*SSSSTS
Trigger: GCTTGTTGAAGATGAAGATCACCTGGAAACAGATCC...TGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGCTCTTTCCTTTCTGAGTTGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp GGAGCTCTGTCTGGGATTTCTGCAGTATATTATTTCGGAGGAGAAGAACCACCAAAGAGTTTTTCCTGCTaGGATGGAGAGAACCTCTCA +
Preference number: 4 (lower is better)
Translates to: GALSGISAVYYFGGEEPPKSFSC*DGENLS
Trigger: TGAGAGGTTCTCTCCATCTCAGCAGGAAAAACTCTT...TGGTGGTTCTTCTCCTCCGAAATAATATACTGCAGAAATCCCAGACAGAGCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR TCA 90 bp GCTTTGGTGTGCCTCCATGGCCAATTTTTCAGGCACCAAAACCCATTCCTGATTCTTGAACTTTTTGCCTaGATCTATCTGAGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: ALVCLHGQFFRHQNPFLILELFA*IYLSPS
Trigger: AGAAGGGCTCAGATAGATTCAGGCAAAAAGTTCAAG...AATCAGGAATGGGTTTTGGTGCCTGAAAAATTGGCCATGGAGGCACACCAAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR TCA 90 bp GAGTTAAAACATGGGAACCAAAGTTTGGCAACCTGGCCTCATTTCCTCCCACAGAGGGTTTTGTACATCTaGGACACGATCCACCTTAAA +
Preference number: 4 (lower is better)
Translates to: ELKHGNQSLATWPHFLPQRVLYI*DTIHLK
Trigger: TTTAAGGTGGATCGTGTCTCAGATGTACAAAACCCT...CTGTGGGAGGAAATGAGGCCAGGTTGCCAAACTTTGGTTCCCATGTTTTAACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR TCA 90 bp CCTCCATTTCAGCTGGAGTTAAAACATGGGAACCAAAGTTTGGCAACCTGGCCTAGGGTTTTGTACATCTaGGACACGATCCACCTTAAA +
Preference number: 4 (lower is better)
Translates to: PPFQLELKHGNQSLATWPRVLYI*DTIHLK
Trigger: TTTAAGGTGGATCGTGTCTCAGATGTACAAAACCCT...AGGCCAGGTTGCCAAACTTTGGTTCCCATGTTTTAACTCCAGCTGAAATGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR TCA 90 bp CCCAAAATCAGAGCTGCACTCAGATCTCAGGTCTTCAATCTTATTGGGAATATCATCCTTCCAGAAGATTaGCGGAAGACAATGGAGGGG +
Preference number: 4 (lower is better)
Translates to: PKIRAALRSQVFNLIGNIILPED*RKTMEG
Trigger: CCCCTCCATTGTCTTCCGTCAATCTTCTGGAAGGAT...GATATTCCCAATAAGATTGAAGACCTGAGATCTGAGTGCAGCTCTGATTTTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR TCA 90 bp AAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTATCCTTCCAGAAGATTaGCGGAAGACAATGGAGGGG +
Preference number: 4 (lower is better)
Translates to: KQSSAFKAADAPSQRSVCILPED*RKTMEG
Trigger: CCCCTCCATTGTCTTCCGTCAATCTTCTGGAAGGAT...ACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp GCCCAAAGACGAGAGAACCTGCTTGTTAGCTCATTAACCTGTTTAGTAAAGATCATCCTTCCAGAAGATTaGCGGAAGACAATGGAGGGG +
Preference number: 4 (lower is better)
Translates to: AQRRENLLVSSLTCLVKIILPED*RKTMEG
Trigger: CCCCTCCATTGTCTTCCGTCAATCTTCTGGAAGGAT...GATCTTTACTAAACAGGTTAATGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp ACACACGAAGTGAAACCAGACAGTGATGGCCCATGTACAAGACTTGTGCTTGAACTATCTTCTCTCAGTTaGTCTCCAGACATCACACTC +
Preference number: 4 (lower is better)
Translates to: THEVKPDSDGPCTRLVLELSSLS*SPDITL
Trigger: GAGTGTGATGTCTGGAGATCAACTGAGAGAAGATAG...TTCAAGCACAAGTCTTGTACATGGGCCATCACTGTCTGGTTTCACTTCGTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR TCA 90 bp ATGTCATGTATGGTAATCAGTCTATCTCCTAATGCAGGCTCACAAACTTCCACGAGCTGGTGGGCACCGTaGGTTATTTCATCCATGTCT +
Preference number: 4 (lower is better)
Translates to: MSCMVISLSPNAGSQTSTSWWAP*VISSMS
Trigger: AGACATGGATGAAATAACTCACGGTGCCCACCAGCT...CGTGGAAGTTTGTGAGCCTGCATTAGGAGATAGACTGATTACCATACATGACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR TCA 90 bp GGAGCTCTGTCTGGGATTTCTGCAGTATATTATTTCGGAGGAGAAGAACCACCAAGAAGCCCCTTCATGTaGAGACAGTGGATCAAACAT +
Preference number: 4 (lower is better)
Translates to: GALSGISAVYYFGGEEPPRSPFM*RQWIKH
Trigger: ATGTTTGATCCACTGTCTTCACATGAAGGGGCTTCT...TGGTGGTTCTTCTCCTCCGAAATAATATACTGCAGAAATCCCAGACAGAGCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR TCA 90 bp ATGCAACTCAGAAAGGAAAGAGCCCAAAGACGAGAGAACCTGCTTGTTAGCTCAAGAAGCCCCTTCATGTaGAGACAGTGGATCAAACAT +
Preference number: 4 (lower is better)
Translates to: MQLRKERAQRRENLLVSSRSPFM*RQWIKH
Trigger: ATGTTTGATCCACTGTCTTCACATGAAGGGGCTTCT...TGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGCTCTTTCCTTTCTGAGTTGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp ACACACGAAGTGAAACCAGACAGTGATGGCCCATGTACAAGACTTGTGCTTGAAAGAAGCCCCTTCATGTaGAGACAGTGGATCAAACAT +
Preference number: 4 (lower is better)
Translates to: THEVKPDSDGPCTRLVLERSPFM*RQWIKH
Trigger: ATGTTTGATCCACTGTCTTCACATGAAGGGGCTTCT...TTCAAGCACAAGTCTTGTACATGGGCCATCACTGTCTGGTTTCACTTCGTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR TCA 90 bp CTGGTGGGCACCGTGAGTTATTTCATCCATGTCTGGACTAGTGACAGAATCTTTAGAAGCCCCTTCATGTaGAGACAGTGGATCAAACAT +
Preference number: 4 (lower is better)
Translates to: LVGTVSYFIHVWTSDRIFRSPFM*RQWIKH
Trigger: ATGTTTGATCCACTGTCTTCACATGAAGGGGCTTCT...AAAGATTCTGTCACTAGTCCAGACATGGATGAAATAACTCACGGTGCCCACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR TCA 90 bp ATGCAACTCAGAAAGGAAAGAGCCCAAAGACGAGAGAACCTGCTTGTTAGCTCAGATGAAGATGATGAATaGGGTGCAGCCACCAAAGAA +
Preference number: 4 (lower is better)
Translates to: MQLRKERAQRRENLLVSSDEDDE*GAATKE
Trigger: TTCTTTGGTGGCTGCACCTCATTCATCATCTTCATC...TGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGCTCTTTCCTTTCTGAGTTGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp ATCATACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATTTCAGTCTCTCCTCTTaGGGAGTCCTTACTCGGGGA +
Preference number: 4 (lower is better)
Translates to: IIQNNLQPSKQLMHLLRDFSLSS*GVLTRG
Trigger: TCCCCGAGTAAGGACTCCTCAAGAGGAGAGACTGAA...ATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGTATGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp GATGCACCTTCTCAGAGATCTGTTTGTCTGATTAACAGTCTGCTGCCTTGGTGGAGCTTTAGGCATGGCTaGAACAAAACGTTTTCTCCA +
Preference number: 4 (lower is better)
Translates to: DAPSQRSVCLINSLLPWWSFRHG*NKTFSP
Trigger: TGGAGAAAACGTTTTGTTTCAGCCATGCCTAAAGCT...CCACCAAGGCAGCAGACTGTTAATCAGACAAACAGATCTCTGAGAAGGTGCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000495955.5
CDS-3UTR TCA 90 bp ATGTCATGTATGGTAATCAGTCTATCTCCTAATGCAGGCTCACAAACTTCCACGTCAAAGGCTGATCACTaGATGCCAGCTACTTGGGAG +
Preference number: 4 (lower is better)
Translates to: MSCMVISLSPNAGSQTSTSKADH*MPATWE
Trigger: CTCCCAAGTAGCTGGCATTCAGTGATCAGCCTTTGA...CGTGGAAGTTTGTGAGCCTGCATTAGGAGATAGACTGATTACCATACATGACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297933.11
CDS-3UTR TCA 90 bp AAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTATCATCTGTGAGTGTTaGGAATCTGTCAGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: KQSSAFKAADAPSQRSVCIICEC*ESVRPQ
Trigger: CTGGGGCCTGACAGATTCTCAACACTCACAGATGAT...ACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000495955.5
CDS-3UTR TCA 90 bp AAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTATATCCTCAGCCACCTaGGCTTGTGCACTGAGTCTA +
Preference number: 4 (lower is better)
Translates to: KQSSAFKAADAPSQRSVCISSAT*ACALSL
Trigger: TAGACTCAGTGCACAAGCTCAGGTGGCTGAGGATAT...ACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp ACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTATATCCTCAGCCACCTaGGCTTGTGCACTGAGTCTA +
Preference number: 4 (lower is better)
Translates to: TKQSSAFKAADAPSQRSVISSAT*ACALSL
Trigger: TAGACTCAGTGCACAAGCTCAGGTGGCTGAGGATAT...AACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp GTAGTACTAGTCTCTACTTGGGGACAAGAAAATAGAATATGCAACTCAGAAAGGTCTGTAAGAGAAAGCTaGATCCTGCGGGTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: VVLVSTWGQENRICNSERSVRES*ILRVGC
Trigger: GCAGCCCACCCGCAGGATTCAGCTTTCTCTTACAGA...CCTTTCTGAGTTGCATATTCTATTTTCTTGTCCCCAAGTAGAGACTAGTACTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp ACACACGAAGTGAAACCAGACAGTGATGGCCCATGTACAAGACTTGTGCTTGAACTTGTCGACAACGAGTaGGATAAGCAATATATGGGG +
Preference number: 4 (lower is better)
Translates to: THEVKPDSDGPCTRLVLELVDNE*DKQYMG
Trigger: CCCCATATATTGCTTATCTCACTCGTTGTCGACAAG...TTCAAGCACAAGTCTTGTACATGGGCCATCACTGTCTGGTTTCACTTCGTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR TCA 90 bp GGAGCTCTGTCTGGGATTTCTGCAGTATATTATTTCGGAGGAGAAGAACCACCATATCGTCAGCTGCGGTaGGTTTCTGAAAGTCTTGAA +
Preference number: 4 (lower is better)
Translates to: GALSGISAVYYFGGEEPPYRQLR*VSESLE
Trigger: TTCAAGACTTTCAGAAACTCACCGCAGCTGACGATA...TGGTGGTTCTTCTCCTCCGAAATAATATACTGCAGAAATCCCAGACAGAGCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR TCA 90 bp GTAGTACTAGTCTCTACTTGGGGACAAGAAAATAGAATATGCAACTCAGAAAGGGCCAGCTGTGCATCTTaGAGCTGTTCTTCACTCGCG +
Preference number: 4 (lower is better)
Translates to: VVLVSTWGQENRICNSERASCAS*SCSSLA
Trigger: CGCGAGTGAAGAACAGCTTCAAGATGCACAGCTGGC...CCTTTCTGAGTTGCATATTCTATTTTCTTGTCCCCAAGTAGAGACTAGTACTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp ATCATACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATGGTAGAAGGCGAGCTTaGAAATCCGGTTCATCACGC +
Preference number: 4 (lower is better)
Translates to: IIQNNLQPSKQLMHLLRDGRRRA*KSGSSR
Trigger: GCGTGATGAACCGGATTTTCAAGCTCGCCTTCTACC...ATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGTATGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp CACCACTATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCAGGTAGAAGGCGAGCTTaGAAATCCGGTTCATCACGC +
Preference number: 4 (lower is better)
Translates to: HHYSNPQCNSYLLSIRCSGRRRA*KSGSSR
Trigger: GCGTGATGAACCGGATTTTCAAGCTCGCCTTCTACC...TGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATAGTGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp GGAGCTCTGTCTGGGATTTCTGCAGTATATTATTTCGGAGGAGAAGAACCACCATATTGTCCTGATTTCTaGTTGTGCAGATGGCCATGG +
Preference number: 4 (lower is better)
Translates to: GALSGISAVYYFGGEEPPYCPDF*LCRWPW
Trigger: CCATGGCCATCTGCACAATCAGAAATCAGGACAATA...TGGTGGTTCTTCTCCTCCGAAATAATATACTGCAGAAATCCCAGACAGAGCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR TCA 90 bp ATGCAACTCAGAAAGGAAAGAGCCCAAAGACGAGAGAACCTGCTTGTTAGCTCATATTGTCCTGATTTCTaGTTGTGCAGATGGCCATGG +
Preference number: 4 (lower is better)
Translates to: MQLRKERAQRRENLLVSSYCPDF*LCRWPW
Trigger: CCATGGCCATCTGCACAATCAGAAATCAGGACAATA...TGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGCTCTTTCCTTTCTGAGTTGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp ACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTAGCCTTCAAAGCAGCTaGTGCACCTTCTCAGAGATC +
Preference number: 4 (lower is better)
Translates to: TKQSSAFKAADAPSQRSVSLQSS*CTFSEI
Trigger: GATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCT...AACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp ATGCAACTCAGAAAGGAAAGAGCCCAAAGACGAGAGAACCTGCTTGTTAGCTCAGGTGAGATGTCTAAGTaGCTTAGTGACCTTCACACT +
Preference number: 4 (lower is better)
Translates to: MQLRKERAQRRENLLVSSGEMSK*LSDLHT
Trigger: AGTGTGAAGGTCACTAAGTCACTTAGACATCTCACC...TGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGCTCTTTCCTTTCTGAGTTGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR TCA 90 bp ATCATACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATACGAGGTCAGGAGATTaGGGATCATCCTGGCCAACA +
Preference number: 4 (lower is better)
Translates to: IIQNNLQPSKQLMHLLRDTRSGD*GSSWPT
Trigger: TGTTGGCCAGGATGATCCTCAATCTCCTGACCTCGT...ATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGTATGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR TCA 90 bp GGAGCTCTGTCTGGGATTTCTGCAGTATATTATTTCGGAGGAGAAGAACCACCAAGTAGTCCTTGCTCCTaGCAGATTTTCAGAGGAAAC +
Preference number: 4 (lower is better)
Translates to: GALSGISAVYYFGGEEPPSSPCS*QIFRGN
Trigger: GTTTCCTCTGAAAATCTGTCAGGAGCAAGGACTACT...TGGTGGTTCTTCTCCTCCGAAATAATATACTGCAGAAATCCCAGACAGAGCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR TCA 90 bp GTAGTACTAGTCTCTACTTGGGGACAAGAAAATAGAATATGCAACTCAGAAAGGGAATTGAACCCTTGCTaGGCTCAGGCCTGTGGGATG +
Preference number: 4 (lower is better)
Translates to: VVLVSTWGQENRICNSERELNPC*AQACGM
Trigger: CATCCCACAGGCCTGAGCTCAGCAAGGGTTCAATTC...CCTTTCTGAGTTGCATATTCTATTTTCTTGTCCCCAAGTAGAGACTAGTACTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR TCA 90 bp TTGTATCCAGTGTCTATCACAGTGCCTCATGTGCAAGACACATCCACTCTCACATCCAAGATCTTCTCCTaGTACCACTACCATTTTGGC +
Preference number: 4 (lower is better)
Translates to: LYPVSITVPHVQDTSTLTSKIFS*YHYHFG
Trigger: GCCAAAATGGTAGTGGTATCAGGAGAAGATCTTGGA...TGTGAGAGTGGATGTGTCTTGCACATGAGGCACTGTGATAGACACTGGATACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394084.5
CDS-3UTR GCA 90 bp TTGAATGCCTCCATTTCAGCTGGAGTTAAAACATGGGAACCAAAGTTTGGCAACGAGATCAGTACACATTaGCCTGACCTCCCCAACTTC +
Preference number: 4 (lower is better)
Translates to: LNASISAGVKTWEPKFGNEISTH*PDLPNF
Trigger: GAAGTTGGGGAGGTCAGGGCAATGTGTACTGATCTC...GTTGCCAAACTTTGGTTCCCATGTTTTAACTCCAGCTGAAATGGAGGCATTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR GCA 90 bp ACACACGAAGTGAAACCAGACAGTGATGGCCCATGTACAAGACTTGTGCTTGAATTCTGGATTGACAACTaGAGGACAAATGAAGCAGGC +
Preference number: 4 (lower is better)
Translates to: THEVKPDSDGPCTRLVLEFWIDN*RTNEAG
Trigger: GCCTGCTTCATTTGTCCTGCAGTTGTCAATCCAGAA...TTCAAGCACAAGTCTTGTACATGGGCCATCACTGTCTGGTTTCACTTCGTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR GCA 90 bp ATGCAACTCAGAAAGGAAAGAGCCCAAAGACGAGAGAACCTGCTTGTTAGCTCATTCTGGATTGACAACTaGAGGACAAATGAAGCAGGC +
Preference number: 4 (lower is better)
Translates to: MQLRKERAQRRENLLVSSFWIDN*RTNEAG
Trigger: GCCTGCTTCATTTGTCCTGCAGTTGTCAATCCAGAA...TGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGCTCTTTCCTTTCTGAGTTGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp ACACACGAAGTGAAACCAGACAGTGATGGCCCATGTACAAGACTTGTGCTTGAAAAAAGGCGGCCTACCTaGATCAGATTAAATCGTGCT +
Preference number: 4 (lower is better)
Translates to: THEVKPDSDGPCTRLVLEKRRPT*IRLNRA
Trigger: AGCACGATTTAATCTGATGCAGGTAGGCCGCCTTTT...TTCAAGCACAAGTCTTGTACATGGGCCATCACTGTCTGGTTTCACTTCGTGTGT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR GCA 90 bp TCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCTGATTCAAACTTTCCAAGGCTaGTCTTTGTTCGGGGATCTC +
Preference number: 4 (lower is better)
Translates to: SSAFKAADAPSQRSVCLIQTFQG*SLFGDL
Trigger: GAGATCCCCGAACAAAGAGCAGCCTTGGAAAGTTTG...AATCAGACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp GGGTCACTCATGGGTCTCCGGACAGAAGATACTATATCAGAGCTCCTGCTTCGATATAAACCACAGTTCTaGTCAATCCTTCCAGAAGAT +
Preference number: 4 (lower is better)
Translates to: GSLMGLRTEDTISELLLRYKPQF*SILPED
Trigger: ATCTTCTGGAAGGATTGAGCAGAACTGTGGTTTATA...TCGAAGCAGGAGCTCTGATATAGTATCTTCTGTCCGGAGACCCATGAGTGACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR GCA 90 bp TCTCTCCTCTTGAGGAGTCCTTACTCGGGGATGAAGATGATGAATGAGGTGCAGTCGATTCTTTTTATTTaGTGGAGTGGTTGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: SLLLRSPYSGMKMMNEVQSILFI*WSGCWR
Trigger: TCTCCAGCAACCACTCCAGCAAATAAAAAGAATCGA...CTGCACCTCATTCATCATCTTCATCCCCGAGTAAGGACTCCTCAAGAGGAGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR GCA 90 bp GCCCAAAGACGAGAGAACCTGCTTGTTAGCTCATTAACCTGTTTAGTAAAGATCCCATTAGCATATTGGTaGGGCTTCTGCTCCGAGTTG +
Preference number: 4 (lower is better)
Translates to: AQRRENLLVSSLTCLVKIPLAYW*GFCSEL
Trigger: CAACTCGGAGCAGAAGCCGCACCAATATGCTAATGG...GATCTTTACTAAACAGGTTAATGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp ACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTCCATTAGCATATTGGTaGGGCTTCTGCTCCGAGTTG +
Preference number: 4 (lower is better)
Translates to: TKQSSAFKAADAPSQRSVPLAYW*GFCSEL
Trigger: CAACTCGGAGCAGAAGCCGCACCAATATGCTAATGG...AACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp GGAGCTCTGTCTGGGATTTCTGCAGTATATTATTTCGGAGGAGAAGAACCACCACCTCCATCCGAAAGCTaGATGTTTAGGACCTCATTT +
Preference number: 4 (lower is better)
Translates to: GALSGISAVYYFGGEEPPPPSES*MFRTSF
Trigger: AAATGAGGTCCTAAACATGCAGCTTTCGGATGGAGG...TGGTGGTTCTTCTCCTCCGAAATAATATACTGCAGAAATCCCAGACAGAGCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR GCA 90 bp TCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCTGATTCTTCAACTCCATTACTaGCAGAAGGTCCTGCTCCAA +
Preference number: 4 (lower is better)
Translates to: SSAFKAADAPSQRSVCLILQLHY*QKVLLQ
Trigger: TTGGAGCAGGACCTTCTGGCAGTAATGGAGTTGAAG...AATCAGACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp ACCAAGGTCTGTTCCTGTCTGATTTCTCATCATCGCTATCTTTGCGTTCTTCAGCTTCAACTCCATTACTaGCAGAAGGTCCTGCTCCAA +
Preference number: 4 (lower is better)
Translates to: TKVCSCLISHHRYLCVLQLQLHY*QKVLLQ
Trigger: TTGGAGCAGGACCTTCTGGCAGTAATGGAGTTGAAG...CTGAAGAACGCAAAGATAGCGATGATGAGAAATCAGACAGGAACAGACCTTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR GCA 90 bp AAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCTCTGCTGCAGCACCTaGAATTTCTTGCAAGCGATC +
Preference number: 4 (lower is better)
Translates to: KQSSAFKAADAPSQRSVCLCCST*NFLQAI
Trigger: GATCGCTTGCAAGAAATTGCAGGTGCTGCAGCAGAG...ACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp AAGGTCTGTTCCTGTCTGATTTCTCATCATCGCTATCTTTGCGTTCTTCAGTCTCTCTGCTGCAGCACCTaGAATTTCTTGCAAGCGATC +
Preference number: 4 (lower is better)
Translates to: KVCSCLISHHRYLCVLQSLCCST*NFLQAI
Trigger: GATCGCTTGCAAGAAATTGCAGGTGCTGCAGCAGAG...AGACTGAAGAACGCAAAGATAGCGATGATGAGAAATCAGACAGGAACAGACCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR GCA 90 bp AAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTGGAGGCACAGCAAACTaGCTAACATGTTCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: KQSSAFKAADAPSQRSVCGGTAN*LTCSLL
Trigger: CAGCAGAGAACATGTTAGGCAGTTTGCTGTGCCTCC...ACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp TTGAATGCCTCCATTTCAGCTGGAGTTAAAACATGGGAACCAAAGTTTGGCAACGGAGGCACAGCAAACTaGCTAACATGTTCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: LNASISAGVKTWEPKFGNGGTAN*LTCSLL
Trigger: CAGCAGAGAACATGTTAGGCAGTTTGCTGTGCCTCC...GTTGCCAAACTTTGGTTCCCATGTTTTAACTCCAGCTGAAATGGAGGCATTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR GCA 90 bp TCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCTGATTCCCCAAAATCAGAGCTaGACTCAGATCTCAGGTCTT +
Preference number: 4 (lower is better)
Translates to: SSAFKAADAPSQRSVCLIPQNQS*TQISGL
Trigger: AAGACCTGAGATCTGAGTGCAGCTCTGATTTTGGGG...AATCAGACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp CAGTGTCTATCACAGTGCCTCATGTGCAAGACACATCCACTCTCACAGGACTTCTTGCTTCGCAATCCATaGTGTACGATACAACTTTTC +
Preference number: 4 (lower is better)
Translates to: QCLSQCLMCKTHPLSQDFLLRNP*CTIQLF
Trigger: GAAAAGTTGTATCGTACAGCATGGATTGCGAAGCAA...GAAGTCCTGTGAGAGTGGATGTGTCTTGCACATGAGGCACTGTGATAGACACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394084.5
CDS-3UTR GCA 90 bp AAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCCGTATCATCAGATGTaGTACCCAGTCCAGAACAGC +
Preference number: 4 (lower is better)
Translates to: KQSSAFKAADAPSQRSVCPYHQM*YPVQNS
Trigger: GCTGTTCTGGACTGGGTAGCACATCTGATGATACGG...ACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp TCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCTGATTTTCATAGTTTGCCATTaGTCCATCACTGGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: SSAFKAADAPSQRSVCLIFIVCH*SITGAG
Trigger: ACCAGCCCCAGTGATGGAGCAATGGCAAACTATGAA...AATCAGACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp TCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCTGATTACGGGGAGAATCATGTaGACTTTCACCATCACCCAT +
Preference number: 4 (lower is better)
Translates to: SSAFKAADAPSQRSVCLITGRIM*TFTITH
Trigger: ATGGGTGATGGTGAAAGTGCACATGATTCTCCCCGT...AATCAGACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp ATCATACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCGAGATGTTCTGCAGTaGTTCGTCACGGGGAGAATC +
Preference number: 4 (lower is better)
Translates to: IIQNNLQPSKQLMHLLRDRDVLQ*FVTGRI
Trigger: GATTCTCCCCGTGACGAAGCACTGCAGAACATCTCG...ATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGTATGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp GTAGTACTAGTCTCTACTTGGGGACAAGAAAATAGAATATGCAACTCAGAAAGGGTGGGCTGCTTGGCTTaGAGAGTCTGGGAGATCATC +
Preference number: 4 (lower is better)
Translates to: VVLVSTWGQENRICNSERVGCLA*RVWEII
Trigger: GATGATCTCCCAGACTCTGCAAGCCAAGCAGCCCAC...CCTTTCTGAGTTGCATATTCTATTTTCTTGTCCCCAAGTAGAGACTAGTACTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp GATGCACCTTCTCAGAGATCTGTTTGTCTGATTAACAGTCTGCTGCCTTGGTGGAGTTTTATCGTCAGCTaGGGTGAGTTTCTGAAAGTC +
Preference number: 4 (lower is better)
Translates to: DAPSQRSVCLINSLLPWWSFIVS*GEFLKV
Trigger: GACTTTCAGAAACTCACCGCAGCTGACGATAAAACT...CCACCAAGGCAGCAGACTGTTAATCAGACAAACAGATCTCTGAGAAGGTGCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp ACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTCTTCACTCGCGTTTTaGCATATGACATCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: TKQSSAFKAADAPSQRSVSSLAF*HMTSWA
Trigger: GGCCCAGGATGTCATATGGCAAAACGCGAGTGAAGA...AACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp GCCCAAAGACGAGAGAACCTGCTTGTTAGCTCATTAACCTGTTTAGTAAAGATCTCTTCACTCGCGTTTTaGCATATGACATCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: AQRRENLLVSSLTCLVKISSLAF*HMTSWA
Trigger: GGCCCAGGATGTCATATGGCAAAACGCGAGTGAAGA...GATCTTTACTAAACAGGTTAATGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp TCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCTGATTCTCAATGGCCAGCTGTaGATCTTGAAGCTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: SSAFKAADAPSQRSVCLILNGQL*ILKLFF
Trigger: GAAGAACAGCTTCAAGATGCACAGCTGGCCATTGAG...AATCAGACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp TCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCTGATTTGCAGATGGCCATGGTaGTTCTCGAAGATAAACCTC +
Preference number: 4 (lower is better)
Translates to: SSAFKAADAPSQRSVCLICRWPW*FSKINL
Trigger: GAGGTTTATCTTCGAGAAGCACCATGGCCATCTGCA...AATCAGACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp ATCATACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATAGCACATTCTCAGGATaGACTGCACTTTGTCCCGGG +
Preference number: 4 (lower is better)
Translates to: IIQNNLQPSKQLMHLLRDSTFSG*TALCPG
Trigger: CCCGGGACAAAGTGCAGTGCATCCTGAGAATGTGCT...ATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGTATGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp CACCACTATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCAAGCACATTCTCAGGATaGACTGCACTTTGTCCCGGG +
Preference number: 4 (lower is better)
Translates to: HHYSNPQCNSYLLSIRCSSTFSG*TALCPG
Trigger: CCCGGGACAAAGTGCAGTGCATCCTGAGAATGTGCT...TGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATAGTGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp ACACACGAAGTGAAACCAGACAGTGATGGCCCATGTACAAGACTTGTGCTTGAACTTGAAGCTTTGGTGTaGCTCCATGGCCAATTTTTC +
Preference number: 4 (lower is better)
Translates to: THEVKPDSDGPCTRLVLELEALV*LHGQFF
Trigger: GAAAAATTGGCCATGGAGGCACACCAAAGCTTCAAG...TTCAAGCACAAGTCTTGTACATGGGCCATCACTGTCTGGTTTCACTTCGTGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR GCA 90 bp GGAGCTCTGTCTGGGATTTCTGCAGTATATTATTTCGGAGGAGAAGAACCACCACATGTACAAGACTTGTaGTTGAAGCTTTGGTGTGCC +
Preference number: 4 (lower is better)
Translates to: GALSGISAVYYFGGEEPPHVQDL*LKLWCA
Trigger: GGCACACCAAAGCTTCAAGCACAAGTCTTGTACATG...TGGTGGTTCTTCTCCTCCGAAATAATATACTGCAGAAATCCCAGACAGAGCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR GCA 90 bp ACACACGAAGTGAAACCAGACAGTGATGGCCCATGTACAAGACTTGTGCTTGAACATGTACAAGACTTGTaGTTGAAGCTTTGGTGTGCC +
Preference number: 4 (lower is better)
Translates to: THEVKPDSDGPCTRLVLEHVQDL*LKLWCA
Trigger: GGCACACCAAAGCTTCAAGCACAAGTCTTGTACATG...TTCAAGCACAAGTCTTGTACATGGGCCATCACTGTCTGGTTTCACTTCGTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR GCA 90 bp GATGCACCTTCTCAGAGATCTGTTTGTCTGATTAACAGTCTGCTGCCTTGGTGGAGTTCCCTTAAAAGATaGCTGGAAATGCTCCCAACA +
Preference number: 4 (lower is better)
Translates to: DAPSQRSVCLINSLLPWWSSLKR*LEMLPT
Trigger: TGTTGGGAGCATTTCCAGGCATCTTTTAAGGGAACT...CCACCAAGGCAGCAGACTGTTAATCAGACAAACAGATCTCTGAGAAGGTGCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR GCA 90 bp GATGCACCTTCTCAGAGATCTGTTTGTCTGATTAACAGTCTGCTGCCTTGGTGGTTACAGCCAATGAAGTaGACGACTCTGTACATGGAT +
Preference number: 4 (lower is better)
Translates to: DAPSQRSVCLINSLLPWWLQPMK*TTLYMD
Trigger: ATCCATGTACAGAGTCGTGCACTTCATTGGCTGTAA...CCACCAAGGCAGCAGACTGTTAATCAGACAAACAGATCTCTGAGAAGGTGCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR GCA 90 bp GCTTTGGTGTGCCTCCATGGCCAATTTTTCAGGCACCAAAACCCATTCCTGATTTTACAGCCAATGAAGTaGACGACTCTGTACATGGAT +
Preference number: 4 (lower is better)
Translates to: ALVCLHGQFFRHQNPFLILQPMK*TTLYMD
Trigger: ATCCATGTACAGAGTCGTGCACTTCATTGGCTGTAA...AATCAGGAATGGGTTTTGGTGCCTGAAAAATTGGCCATGGAGGCACACCAAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR GCA 90 bp AAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCTGAGATTGTTCTCTTaGTCACGCACCTCAGGGACA +
Preference number: 4 (lower is better)
Translates to: KQSSAFKAADAPSQRSVCLRLFS*SRTSGT
Trigger: TGTCCCTGAGGTGCGTGAGCAAGAGAACAATCTCAG...ACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR GCA 90 bp TTGACAGTAAGGGCAGGTCCTAATGGTCTTTGTATCCAGTGTCTATCACAGTGCCAGTGTCTATCACAGTaGCTCATGTGCAAGACACAT +
Preference number: 4 (lower is better)
Translates to: LTVRAGPNGLCIQCLSQCQCLSQ*LMCKTH
Trigger: ATGTGTCTTGCACATGAGGCACTGTGATAGACACTG...GCACTGTGATAGACACTGGATACAAAGACCATTAGGACCTGCCCTTACTGTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394084.5
CDS-3UTR GCA 90 bp AGAGGTCAGCTGGTGGGCACCGTGAGTTATTTCATCCATGTCTGGACTAGTGACACCACTATCACTTCCTaGAAAGAACAAGAACATTTC +
Preference number: 4 (lower is better)
Translates to: RGQLVGTVSYFIHVWTSDTTITS*KEQEHF
Trigger: GAAATGTTCTTGTTCTTTGCAGGAAGTGATAGTGGT...GTCACTAGTCCAGACATGGATGAAATAACTCACGGTGCCCACCAGCTGACCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497580.5
CDS-3UTR CCA 90 bp ATCATACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATATTGACGGAAGACAATaGAGGGGTCTCCACTGCACG +
Preference number: 4 (lower is better)
Translates to: IIQNNLQPSKQLMHLLRDIDGRQ*RGLHCT
Trigger: CGTGCAGTGGAGACCCCTCCATTGTCTTCCGTCAAT...ATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGTATGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp ATCATACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATTACTTTTTCCTGGCTTaGCCGGGGGTAGGTTTGCCA +
Preference number: 4 (lower is better)
Translates to: IIQNNLQPSKQLMHLLRDYFFLA*PGVGLP
Trigger: TGGCAAACCTACCCCCGGCCAAGCCAGGAAAAAGTA...ATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGTATGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp GTCTCCGGACAGAAGATACTATATCAGAGCTCCTGCTTCGAACTAGTCTCTCAGTTTTATTTGCTGGAGTaGTTGCTGGAGATAGCTGAG +
Preference number: 4 (lower is better)
Translates to: VSGQKILYQSSCFELVSQFYLLE*LLEIAE
Trigger: CTCAGCTATCTCCAGCAACCACTCCAGCAAATAAAA...CTGAGAGACTAGTTCGAAGCAGGAGCTCTGATATAGTATCTTCTGTCCGGAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR CCA 90 bp TGTATCCAGTGTCTATCACAGTGCCTCATGTGCAAGACACATCCACTCTCACAGTTTTATTTGCTGGAGTaGTTGCTGGAGATAGCTGAG +
Preference number: 4 (lower is better)
Translates to: CIQCLSQCLMCKTHPLSQFYLLE*LLEIAE
Trigger: CTCAGCTATCTCCAGCAACCACTCCAGCAAATAAAA...CTGTGAGAGTGGATGTGTCTTGCACATGAGGCACTGTGATAGACACTGGATACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394084.5
CDS-3UTR CCA 90 bp GCCCAAAGACGAGAGAACCTGCTTGTTAGCTCATTAACCTGTTTAGTAAAGATCGACCAACACCTCTTCTaGTTGCACCTCCTGAATGGT +
Preference number: 4 (lower is better)
Translates to: AQRRENLLVSSLTCLVKIDQHLF*LHLLNG
Trigger: ACCATTCAGGAGGTGCAACCAGAAGAGGTGTTGGTC...GATCTTTACTAAACAGGTTAATGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp AAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTGACCAACACCTCTTCTaGTTGCACCTCCTGAATGGT +
Preference number: 4 (lower is better)
Translates to: KQSSAFKAADAPSQRSVCDQHLF*LHLLNG
Trigger: ACCATTCAGGAGGTGCAACCAGAAGAGGTGTTGGTC...ACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp AAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTATCCCTGGAGTAAGCTaGGGACCTGTACCTAAGGAA +
Preference number: 4 (lower is better)
Translates to: KQSSAFKAADAPSQRSVCIPGVS*GPVPKE
Trigger: TTCCTTAGGTACAGGTCCCCAGCTTACTCCAGGGAT...ACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp AAGGTCTGTTCCTGTCTGATTTCTCATCATCGCTATCTTTGCGTTCTTCAGTCTATCCCTGGAGTAAGCTaGGGACCTGTACCTAAGGAA +
Preference number: 4 (lower is better)
Translates to: KVCSCLISHHRYLCVLQSIPGVS*GPVPKE
Trigger: TTCCTTAGGTACAGGTCCCCAGCTTACTCCAGGGAT...AGACTGAAGAACGCAAAGATAGCGATGATGAGAAATCAGACAGGAACAGACCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR CCA 90 bp TATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCATTAATGCACAACACTGAGGCCTaGTGTGCTGGGGCGGGAACT +
Preference number: 4 (lower is better)
Translates to: YSNPQCNSYLLSIRCSLMHNTEA*CAGAGT
Trigger: AGTTCCCGCCCCAGCACACCAGGCCTCAGTGTTGTG...CATTAATGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp CGGTTCCAGCTGGGGTCACTCATGGGTCTCCGGACAGAAGATACTATATCAGAGTATTTCATCCATGTCTaGACTAGTGACAGAATCTTT +
Preference number: 4 (lower is better)
Translates to: RFQLGSLMGLRTEDTISEYFIHV*TSDRIF
Trigger: AAAGATTCTGTCACTAGTCCAGACATGGATGAAATA...CTCTGATATAGTATCTTCTGTCCGGAGACCCATGAGTGACCCCAGCTGGAACCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR CCA 90 bp TCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCTGATTAGCATAGTGAACCTTTaGCCTTACCACAGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: SSAFKAADAPSQRSVCLISIVNL*PYHSRS
Trigger: GCTTCTGCTGTGGTAAGGCCAAAGGTTCACTATGCT...AATCAGACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp ACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGGTGGTGGATGCGATaGCCTAGCATAGTGAACCTT +
Preference number: 4 (lower is better)
Translates to: TKQSSAFKAADAPSQRSVWWWMR*PSIVNL
Trigger: AAGGTTCACTATGCTAGGCCATCGCATCCACCACCA...AACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp TGCTTAACATTTACTGAATCAAAGGCTGAAGTAAATGGACTCTCATCTAGGTCTCAGGATTGGGGGATCTaGTGGTGGATGCGATGGCCT +
Preference number: 4 (lower is better)
Translates to: CLTFTESKAEVNGLSSRSQDWGI*WWMRWP
Trigger: AGGCCATCGCATCCACCACCAGATCCCCCAATCCTG...AGACCTAGATGAGAGTCCATTTACTTCAGCCTTTGATTCAGTAAATGTTAAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR CCA 90 bp GTAGTACTAGTCTCTACTTGGGGACAAGAAAATAGAATATGCAACTCAGAAAGGAGCTCCTTCCAGGATTaGGGGATCTGGTGGTGGATG +
Preference number: 4 (lower is better)
Translates to: VVLVSTWGQENRICNSERSSFQD*GIWWWM
Trigger: CATCCACCACCAGATCCCCCAATCCTGGAAGGAGCT...CCTTTCTGAGTTGCATATTCTATTTTCTTGTCCCCAAGTAGAGACTAGTACTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp TTTACCCCCAAAATCAGAGCTGCACTCAGATCTCAGGTCTTCAATCTTATTGGGATGGGAACCAAAGTTTaGCAACCTGGCCTCATTTCC +
Preference number: 4 (lower is better)
Translates to: FTPKIRAALRSQVFNLIGMGTKV*QPGLIS
Trigger: GGAAATGAGGCCAGGTTGCCAAACTTTGGTTCCCAT...CCCAATAAGATTGAAGACCTGAGATCTGAGTGCAGCTCTGATTTTGGGGGTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR CCA 90 bp TCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCTGATTATGGGAACCAAAGTTTaGCAACCTGGCCTCATTTCC +
Preference number: 4 (lower is better)
Translates to: SSAFKAADAPSQRSVCLIMGTKV*QPGLIS
Trigger: GGAAATGAGGCCAGGTTGCCAAACTTTGGTTCCCAT...AATCAGACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp GATGCACCTTCTCAGAGATCTGTTTGTCTGATTAACAGTCTGCTGCCTTGGTGGGCTGGAGTTAAAACATaGGAACCAAAGTTTGGCAAC +
Preference number: 4 (lower is better)
Translates to: DAPSQRSVCLINSLLPWWAGVKT*EPKFGN
Trigger: GTTGCCAAACTTTGGTTCCCATGTTTTAACTCCAGC...CCACCAAGGCAGCAGACTGTTAATCAGACAAACAGATCTCTGAGAAGGTGCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp ATCATACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATAGCTGGGGTCACTCATaGGTCTCCGGACAGAAGATA +
Preference number: 4 (lower is better)
Translates to: IIQNNLQPSKQLMHLLRDSWGHS*VSGQKI
Trigger: TATCTTCTGTCCGGAGACCCATGAGTGACCCCAGCT...ATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGTATGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp GTAGTACTAGTCTCTACTTGGGGACAAGAAAATAGAATATGCAACTCAGAAAGGACCAATGGCTGCAGCTaGAGGGAGTTCTCGCTCTTC +
Preference number: 4 (lower is better)
Translates to: VVLVSTWGQENRICNSERTNGCS*REFSLF
Trigger: GAAGAGCGAGAACTCCCTCCAGCTGCAGCCATTGGT...CCTTTCTGAGTTGCATATTCTATTTTCTTGTCCCCAAGTAGAGACTAGTACTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp ACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTTGGCTTGCAGAGTCTaGGAGATCATCAGCCGAGAT +
Preference number: 4 (lower is better)
Translates to: TKQSSAFKAADAPSQRSVLACRV*EIISRD
Trigger: ATCTCGGCTGATGATCTCCCAGACTCTGCAAGCCAA...AACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp TATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCATTAATGTGCGGGTGGGCTGCTTaGCTTGCAGAGTCTGGGAGA +
Preference number: 4 (lower is better)
Translates to: YSNPQCNSYLLSIRCSLMCGWAA*LAESGR
Trigger: TCTCCCAGACTCTGCAAGCCAAGCAGCCCACCCGCA...CATTAATGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp TATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCATTAATGGCTGAATCCTGCGGGTaGGCTGCTTGGCTTGCAGAG +
Preference number: 4 (lower is better)
Translates to: YSNPQCNSYLLSIRCSLMAESCG*AAWLAE
Trigger: CTCTGCAAGCCAAGCAGCCCACCCGCAGGATTCAGC...CATTAATGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp ATGCAACTCAGAAAGGAAAGAGCCCAAAGACGAGAGAACCTGCTTGTTAGCTCATCTTCTGGGTCTGTGTaGTCTGGTAAACCATTCCTT +
Preference number: 4 (lower is better)
Translates to: MQLRKERAQRRENLLVSSSSGSV*SGKPFL
Trigger: AAGGAATGGTTTACCAGACCACACAGACCCAGAAGA...TGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGCTCTTTCCTTTCTGAGTTGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp ACACACGAAGTGAAACCAGACAGTGATGGCCCATGTACAAGACTTGTGCTTGAATCTTCTGGGTCTGTGTaGTCTGGTAAACCATTCCTT +
Preference number: 4 (lower is better)
Translates to: THEVKPDSDGPCTRLVLESSGSV*SGKPFL
Trigger: AAGGAATGGTTTACCAGACCACACAGACCCAGAAGA...TTCAAGCACAAGTCTTGTACATGGGCCATCACTGTCTGGTTTCACTTCGTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR CCA 90 bp GGAGCTCTGTCTGGGATTTCTGCAGTATATTATTTCGGAGGAGAAGAACCACCATTGTGCAGATGGCCATaGTGCTTCTCGAAGATAAAC +
Preference number: 4 (lower is better)
Translates to: GALSGISAVYYFGGEEPPLCRWP*CFSKIN
Trigger: GTTTATCTTCGAGAAGCACCATGGCCATCTGCACAA...TGGTGGTTCTTCTCCTCCGAAATAATATACTGCAGAAATCCCAGACAGAGCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR CCA 90 bp ATGCAACTCAGAAAGGAAAGAGCCCAAAGACGAGAGAACCTGCTTGTTAGCTCATTGTGCAGATGGCCATaGTGCTTCTCGAAGATAAAC +
Preference number: 4 (lower is better)
Translates to: MQLRKERAQRRENLLVSSLCRWP*CFSKIN
Trigger: GTTTATCTTCGAGAAGCACCATGGCCATCTGCACAA...TGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGCTCTTTCCTTTCTGAGTTGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp GTAGTACTAGTCTCTACTTGGGGACAAGAAAATAGAATATGCAACTCAGAAAGGGGACAGAGTCCTCATTaGCCAGGCTCAGGAGGTTCA +
Preference number: 4 (lower is better)
Translates to: VVLVSTWGQENRICNSERGQSPH*PGSGGS
Trigger: TGAACCTCCTGAGCCTGGCCAATGAGGACTCTGTCC...CCTTTCTGAGTTGCATATTCTATTTTCTTGTCCCCAAGTAGAGACTAGTACTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp CACCACTATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCAGGTGGGCCTTGGTCTTaGTCACTTTCGGTCATCGAT +
Preference number: 4 (lower is better)
Translates to: HHYSNPQCNSYLLSIRCSGGPWS*SLSVID
Trigger: ATCGATGACCGAAAGTGACCAAGACCAAGGCCCACC...TGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATAGTGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp GTAGTACTAGTCTCTACTTGGGGACAAGAAAATAGAATATGCAACTCAGAAAGGTGCCTTGGTGGGCCTTaGTCTTGGTCACTTTCGGTC +
Preference number: 4 (lower is better)
Translates to: VVLVSTWGQENRICNSERCLGGP*SWSLSV
Trigger: GACCGAAAGTGACCAAGACCAAGGCCCACCAAGGCA...CCTTTCTGAGTTGCATATTCTATTTTCTTGTCCCCAAGTAGAGACTAGTACTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp GTAGTACTAGTCTCTACTTGGGGACAAGAAAATAGAATATGCAACTCAGAAAGGAGTCTGCTGCCTTGGTaGGCCTTGGTCTTGGTCACT +
Preference number: 4 (lower is better)
Translates to: VVLVSTWGQENRICNSERSLLPW*ALVLVT
Trigger: AGTGACCAAGACCAAGGCCCACCAAGGCAGCAGACT...CCTTTCTGAGTTGCATATTCTATTTTCTTGTCCCCAAGTAGAGACTAGTACTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp GCTTTGGTGTGCCTCCATGGCCAATTTTTCAGGCACCAAAACCCATTCCTGATTCCCTTAAAAGATGCCTaGAAATGCTCCCAACAACAA +
Preference number: 4 (lower is better)
Translates to: ALVCLHGQFFRHQNPFLIPLKDA*KCSQQQ
Trigger: TTGTTGTTGGGAGCATTTCCAGGCATCTTTTAAGGG...AATCAGGAATGGGTTTTGGTGCCTGAAAAATTGGCCATGGAGGCACACCAAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
3UTR CAA 72 bp GGTCTGTTCCTGTCTGATTTCTCATCATCGCTATCTTaGCGTTCTTCAGTCTCTCCTCTTGAGGAGTCCTTA +
Preference number: 4 (lower is better)
Translates to: GLFLSDFSSSLS*RSSVSPLEESL
Trigger: TAAGGACTCCTCAAGAGGAGAGACTGAAGAACGCAAAGATAGCGATGATGAGAAATCAGACAGGAACAGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
3UTR CAA 72 bp GCACAAGAAGAATCCAGTAGACAGGAGAGTATTAATTaGACAGAGGTGAATTCCCCTAGTGCATGGCCGCTA +
Preference number: 4 (lower is better)
Translates to: AQEESSRQESIN*TEVNSPSAWPL
Trigger: TAGCGGCCATGCACTAGGGGAATTCACCTCTGTCAAATTAATACTCTCCTGTCTACTGGATTCTTCTTGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR TCA 90 bp ATGCAACTCAGAAAGGAAAGAGCCCAAAGACGAGAGAACCTGCTTGTTAGCTCATTTCATCTTCTTGCATaGTGCAATTGCCATACAGGG +
Preference number: 4 (lower is better)
Translates to: MQLRKERAQRRENLLVSSFHLLA*CNCHTG
Trigger: CCCTGTATGGCAATTGCATCATGCAAGAAGATGAAA...TGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGCTCTTTCCTTTCTGAGTTGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp TTGTATCCAGTGTCTATCACAGTGCCTCATGTGCAAGACACATCCACTCTCACACATGTAAAGTGGCTGTaGGGAAAAGTTTGGCAGAAA +
Preference number: 4 (lower is better)
Translates to: LYPVSITVPHVQDTSTLTHVKWL*GKVWQK
Trigger: TTTCTGCCAAACTTTTCCTCACAGCCACTTTACATG...TGTGAGAGTGGATGTGTCTTGCACATGAGGCACTGTGATAGACACTGGATACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394084.5
CDS-3UTR TCA 90 bp ATGCAACTCAGAAAGGAAAGAGCCCAAAGACGAGAGAACCTGCTTGTTAGCTCACATGTAAAGTGGCTGTaGGGAAAAGTTTGGCAGAAA +
Preference number: 4 (lower is better)
Translates to: MQLRKERAQRRENLLVSSHVKWL*GKVWQK
Trigger: TTTCTGCCAAACTTTTCCTCACAGCCACTTTACATG...TGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGCTCTTTCCTTTCTGAGTTGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp ATGCAACTCAGAAAGGAAAGAGCCCAAAGACGAGAGAACCTGCTTGTTAGCTCAAGGGTTTTGTACATCTaGGACACGATCCACCTTAAA +
Preference number: 4 (lower is better)
Translates to: MQLRKERAQRRENLLVSSRVLYI*DTIHLK
Trigger: TTTAAGGTGGATCGTGTCTCAGATGTACAAAACCCT...TGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGCTCTTTCCTTTCTGAGTTGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp TATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCATTAATGCAGTACACATTGCCCTaGCCTCCCCAACTTCCAGCC +
Preference number: 4 (lower is better)
Translates to: YSNPQCNSYLLSIRCSLMQYTLP*PPQLPA
Trigger: GGCTGGAAGTTGGGGAGGTCAGGGCAATGTGTACTG...CATTAATGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp CACCACTATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCAATCCTTCCAGAAGATTaGCGGAAGACAATGGAGGGG +
Preference number: 4 (lower is better)
Translates to: HHYSNPQCNSYLLSIRCSILPED*RKTMEG
Trigger: CCCCTCCATTGTCTTCCGTCAATCTTCTGGAAGGAT...TGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATAGTGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp TCACCTGCTCCAAGATCTTCTCCTGATACCACTACCATTTTGGCTAAGTTAGGTCTATCTTCTCTCAGTTaGTCTCCAGACATCACACTC +
Preference number: 4 (lower is better)
Translates to: SPAPRSSPDTTTILAKLGLSSLS*SPDITL
Trigger: GAGTGTGATGTCTGGAGATCAACTGAGAGAAGATAG...ACCTAACTTAGCCAAAATGGTAGTGGTATCAGGAGAAGATCTTGGAGCAGGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394084.5
CDS-3UTR TCA 90 bp GCTTTGGTGTGCCTCCATGGCCAATTTTTCAGGCACCAAAACCCATTCCTGATTAATGGTTTCTTGAGATaGTCCTTCATGGTCCATATG +
Preference number: 4 (lower is better)
Translates to: ALVCLHGQFFRHQNPFLINGFLR*SFMVHM
Trigger: CATATGGACCATGAAGGATCATCTCAAGAAACCATT...AATCAGGAATGGGTTTTGGTGCCTGAAAAATTGGCCATGGAGGCACACCAAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR TCA 90 bp GATGCACCTTCTCAGAGATCTGTTTGTCTGATTAACAGTCTGCTGCCTTGGTGGAATGGTTTCTTGAGATaGTCCTTCATGGTCCATATG +
Preference number: 4 (lower is better)
Translates to: DAPSQRSVCLINSLLPWWNGFLR*SFMVHM
Trigger: CATATGGACCATGAAGGATCATCTCAAGAAACCATT...CCACCAAGGCAGCAGACTGTTAATCAGACAAACAGATCTCTGAGAAGGTGCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp CACCAAGGTCTGTTCCTGTCTGATTTCTCATCATCGCTATCTTTGCGTTCTTCACTGTACCTAAGGAAATaGCCAACACCTCTTCTGGTT +
Preference number: 4 (lower is better)
Translates to: HQGLFLSDFSSSLSLRSSLYLRK*PTPLLV
Trigger: AACCAGAAGAGGTGTTGGTCATTTCCTTAGGTACAG...TGAAGAACGCAAAGATAGCGATGATGAGAAATCAGACAGGAACAGACCTTGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR TCA 90 bp ATGCAACTCAGAAAGGAAAGAGCCCAAAGACGAGAGAACCTGCTTGTTAGCTCACTCACTCACTGTTTCTaGTATGTCCCTATCATCTGT +
Preference number: 4 (lower is better)
Translates to: MQLRKERAQRRENLLVSSLTHCF*YVPIIC
Trigger: ACAGATGATAGGGACATATCAGAAACAGTGAGTGAG...TGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGCTCTTTCCTTTCTGAGTTGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp ATCATACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATAGCTGGTGGGCACCGTaGGTTATTTCATCCATGTCT +
Preference number: 4 (lower is better)
Translates to: IIQNNLQPSKQLMHLLRDSWWAP*VISSMS
Trigger: AGACATGGATGAAATAACTCACGGTGCCCACCAGCT...ATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGTATGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp TGTTCCTGTCTGATTTCTCATCATCGCTATCTTTGCGTTCTTCAGTCTCTCCTCAGAAGCCCCTTCATGTaGAGACAGTGGATCAAACAT +
Preference number: 4 (lower is better)
Translates to: CSCLISHHRYLCVLQSLLRSPFM*RQWIKH
Trigger: ATGTTTGATCCACTGTCTTCACATGAAGGGGCTTCT...GAGGAGAGACTGAAGAACGCAAAGATAGCGATGATGAGAAATCAGACAGGAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR TCA 90 bp TCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCTGATTAGAAGCCCCTTCATGTaGAGACAGTGGATCAAACAT +
Preference number: 4 (lower is better)
Translates to: SSAFKAADAPSQRSVCLIRSPFM*RQWIKH
Trigger: ATGTTTGATCCACTGTCTTCACATGAAGGGGCTTCT...AATCAGACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp TTTACCCCCAAAATCAGAGCTGCACTCAGATCTCAGGTCTTCAATCTTATTGGGGATGAAGATGATGAATaGGGTGCAGCCACCAAAGAA +
Preference number: 4 (lower is better)
Translates to: FTPKIRAALRSQVFNLIGDEDDE*GAATKE
Trigger: TTCTTTGGTGGCTGCACCTCATTCATCATCTTCATC...CCCAATAAGATTGAAGACCTGAGATCTGAGTGCAGCTCTGATTTTGGGGGTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR TCA 90 bp TGCCTTAGCATTCATCTGAGTGGAACCACTTTCTACACCCTCAAAGTAGCTAGAGATGAAGATGATGAATaGGGTGCAGCCACCAAAGAA +
Preference number: 4 (lower is better)
Translates to: CLSIHLSGTTFYTLKVARDEDDE*GAATKE
Trigger: TTCTTTGGTGGCTGCACCTCATTCATCATCTTCATC...TCTAGCTACTTTGAGGGTGTAGAAAGTGGTTCCACTCAGATGAATGCTAAGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497580.5
CDS-3UTR TCA 90 bp GGCATGGCTGAAACAAAACGTTTTCTCCACCAAGGTCTGTTCCTGTCTGATTTCAGCTTTAGGCATGGCTaGAACAAAACGTTTTCTCCA +
Preference number: 4 (lower is better)
Translates to: GMAETKRFLHQGLFLSDFSFRHG*NKTFSP
Trigger: TGGAGAAAACGTTTTGTTTCAGCCATGCCTAAAGCT...GAAATCAGACAGGAACAGACCTTGGTGGAGAAAACGTTTTGTTTCAGCCATGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000265956.8
CDS-3UTR TCA 90 bp CACCACTATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCAGAAAGGCTCAAAGGCTaGTCACTGAATGCCAGCTAC +
Preference number: 4 (lower is better)
Translates to: HHYSNPQCNSYLLSIRCSERLKG*SLNASY
Trigger: GTAGCTGGCATTCAGTGATCAGCCTTTGAGCCTTTC...TGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATAGTGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000495955.5
CDS-3UTR TCA 90 bp ACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTATAAGCGTTCCTGCTTaGGGTGATGAGCCAGAGTAT +
Preference number: 4 (lower is better)
Translates to: TKQSSAFKAADAPSQRSVISVPA*GDEPEY
Trigger: ATACTCTGGCTCATCACCTCAAGCAGGAACGCTTAT...AACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp ACCGTGAGTTATTTCATCCATGTCTGGACTAGTGACAGAATCTTTACCCCCAAAATAAGCGTTCCTGCTTaGGGTGATGAGCCAGAGTAT +
Preference number: 4 (lower is better)
Translates to: TVSYFIHVWTSDRIFTPKISVPA*GDEPEY
Trigger: ATACTCTGGCTCATCACCTCAAGCAGGAACGCTTAT...TTTGGGGGTAAAGATTCTGTCACTAGTCCAGACATGGATGAAATAACTCACGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497580.5
CDS-3UTR TCA 90 bp AAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTTCTGCATTGAGCCTCTaGATGAGCTGTTTCTCAGAG +
Preference number: 4 (lower is better)
Translates to: KQSSAFKAADAPSQRSVCSALSL*MSCFSE
Trigger: CTCTGAGAAACAGCTCATTCAGAGGCTCAATGCAGA...ACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp ACGCTTAGTATGCTGAAGGGTACTAGTCTCTTCTTGCTCTCCCTAACTAAACTATCTGCATTGAGCCTCTaGATGAGCTGTTTCTCAGAG +
Preference number: 4 (lower is better)
Translates to: TLSMLKGTSLFLLSLTKLSALSL*MSCFSE
Trigger: CTCTGAGAAACAGCTCATTCAGAGGCTCAATGCAGA...TAGTTTAGTTAGGGAGAGCAAGAAGAGACTAGTACCCTTCAGCATACTAAGCGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394084.5
CDS-3UTR TCA 90 bp CACCACTATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCAGGCTGGGATCATCTGTaGGTGTTGAGAATCTGTCAG +
Preference number: 4 (lower is better)
Translates to: HHYSNPQCNSYLLSIRCSGWDHL*VLRICQ
Trigger: CTGACAGATTCTCAACACTCACAGATGATCCCAGCC...TGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATAGTGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000495955.5
CDS-3UTR TCA 90 bp TCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCTGATTTATCGTCAGCTGCGGTaGGTTTCTGAAAGTCTTGAA +
Preference number: 4 (lower is better)
Translates to: SSAFKAADAPSQRSVCLIYRQLR*VSESLE
Trigger: TTCAAGACTTTCAGAAACTCACCGCAGCTGACGATA...AATCAGACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp AAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCTCTGGATATGTTCATaGAGAACCTGGTCGCGAAGT +
Preference number: 4 (lower is better)
Translates to: KQSSAFKAADAPSQRSVCLWICS*RTWSRS
Trigger: ACTTCGCGACCAGGTTCTTCATGAACATATCCAGAG...ACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp ATGTCATGTATGGTAATCAGTCTATCTCCTAATGCAGGCTCACAAACTTCCACGATTCTACTGCTGCTGTaGACTGCATCCACCAATAGG +
Preference number: 4 (lower is better)
Translates to: MSCMVISLSPNAGSQTSTILLLL*TASTNR
Trigger: CCTATTGGTGGATGCAGTTCACAGCAGCAGTAGAAT...CGTGGAAGTTTGTGAGCCTGCATTAGGAGATAGACTGATTACCATACATGACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR TCA 90 bp AAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTATTCTACTGCTGCTGTaGACTGCATCCACCAATAGG +
Preference number: 4 (lower is better)
Translates to: KQSSAFKAADAPSQRSVCILLLL*TASTNR
Trigger: CCTATTGGTGGATGCAGTTCACAGCAGCAGTAGAAT...ACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp GCCCAAAGACGAGAGAACCTGCTTGTTAGCTCATTAACCTGTTTAGTAAAGATCATTCTACTGCTGCTGTaGACTGCATCCACCAATAGG +
Preference number: 4 (lower is better)
Translates to: AQRRENLLVSSLTCLVKIILLLL*TASTNR
Trigger: CCTATTGGTGGATGCAGTTCACAGCAGCAGTAGAAT...GATCTTTACTAAACAGGTTAATGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp CACCACTATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCAAGCCTTCAAAGCAGCTaGTGCACCTTCTCAGAGATC +
Preference number: 4 (lower is better)
Translates to: HHYSNPQCNSYLLSIRCSSLQSS*CTFSEI
Trigger: GATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCT...TGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATAGTGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp ACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTACAAGACTTGTGCTTaGAGCTTTGGTGTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: TKQSSAFKAADAPSQRSVYKTCA*SFGVPP
Trigger: TGGAGGCACACCAAAGCTTCAAGCACAAGTCTTGTA...AACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR TCA 90 bp AAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTTACAAGACTTGTGCTTaGAGCTTTGGTGTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: KQSSAFKAADAPSQRSVCYKTCA*SFGVPP
Trigger: TGGAGGCACACCAAAGCTTCAAGCACAAGTCTTGTA...ACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR TCA 90 bp GCCCAAAGACGAGAGAACCTGCTTGTTAGCTCATTAACCTGTTTAGTAAAGATCAGACGTCATCTCTCTTaGATTGAACCCTTGCTGAGC +
Preference number: 4 (lower is better)
Translates to: AQRRENLLVSSLTCLVKIRRHLS*IEPLLS
Trigger: GCTCAGCAAGGGTTCAATTCAAGAGAGATGACGTCT...GATCTTTACTAAACAGGTTAATGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR TCA 90 bp TTGTATCCAGTGTCTATCACAGTGCCTCATGTGCAAGACACATCCACTCTCACAATGCCACACTCCTGTTaGTACAATTCCACATTACGT +
Preference number: 4 (lower is better)
Translates to: LYPVSITVPHVQDTSTLTMPHSC*YNSTLR
Trigger: ACGTAATGTGGAATTGTATCAACAGGAGTGTGGCAT...TGTGAGAGTGGATGTGTCTTGCACATGAGGCACTGTGATAGACACTGGATACAA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394084.5
CDS-3UTR TCA 90 bp CAAGGTCTGTTCCTGTCTGATTTCTCATCATCGCTATCTTTGCGTTCTTCAGTCGTCTTACAGAGGAGTTaGGACATTGGCTCTCTGAAA +
Preference number: 4 (lower is better)
Translates to: QGLFLSDFSSSLSLRSSVVLQRS*DIGSLK
Trigger: TTTCAGAGAGCCAATGTCTCAACTCCTCTGTAAGAC...GACTGAAGAACGCAAAGATAGCGATGATGAGAAATCAGACAGGAACAGACCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497580.5
CDS-3UTR GCA 90 bp TCACCTGCTCCAAGATCTTCTCCTGATACCACTACCATTTTGGCTAAGTTAGGTAAAAGGCGGCCTACCTaGATCAGATTAAATCGTGCT +
Preference number: 4 (lower is better)
Translates to: SPAPRSSPDTTTILAKLGKRRPT*IRLNRA
Trigger: AGCACGATTTAATCTGATGCAGGTAGGCCGCCTTTT...ACCTAACTTAGCCAAAATGGTAGTGGTATCAGGAGAAGATCTTGGAGCAGGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394084.5
CDS-3UTR GCA 90 bp TCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCTGATTAAAAGGCGGCCTACCTaGATCAGATTAAATCGTGCT +
Preference number: 4 (lower is better)
Translates to: SSAFKAADAPSQRSVCLIKRRPT*IRLNRA
Trigger: AGCACGATTTAATCTGATGCAGGTAGGCCGCCTTTT...AATCAGACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp GTAGTACTAGTCTCTACTTGGGGACAAGAAAATAGAATATGCAACTCAGAAAGGCCAGTCATTGCTAACTaGTGCAAAAGGCGGCCTACC +
Preference number: 4 (lower is better)
Translates to: VVLVSTWGQENRICNSERPVIAN*CKRRPT
Trigger: GGTAGGCCGCCTTTTGCAGCAGTTAGCAATGACTGG...CCTTTCTGAGTTGCATATTCTATTTTCTTGTCCCCAAGTAGAGACTAGTACTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp GCTTTGGTGTGCCTCCATGGCCAATTTTTCAGGCACCAAAACCCATTCCTGATTTCGATTCTTTTTATTTaGTGGAGTGGTTGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: ALVCLHGQFFRHQNPFLISILFI*WSGCWR
Trigger: TCTCCAGCAACCACTCCAGCAAATAAAAAGAATCGA...AATCAGGAATGGGTTTTGGTGCCTGAAAAATTGGCCATGGAGGCACACCAAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR GCA 90 bp TCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCTGATTCCTCCATCCGAAAGCTaGATGTTTAGGACCTCATTT +
Preference number: 4 (lower is better)
Translates to: SSAFKAADAPSQRSVCLIPPSES*MFRTSF
Trigger: AAATGAGGTCCTAAACATGCAGCTTTCGGATGGAGG...AATCAGACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp ACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTCTTCCAGATTATCACTaGAGAGGGAAAAGCGCAAGG +
Preference number: 4 (lower is better)
Translates to: TKQSSAFKAADAPSQRSVLPDYH*RGKSAR
Trigger: CCTTGCGCTTTTCCCTCTGCAGTGATAATCTGGAAG...AACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp GCCCAAAGACGAGAGAACCTGCTTGTTAGCTCATTAACCTGTTTAGTAAAGATCCTTCAACTCCATTACTaGCAGAAGGTCCTGCTCCAA +
Preference number: 4 (lower is better)
Translates to: AQRRENLLVSSLTCLVKILQLHY*QKVLLQ
Trigger: TTGGAGCAGGACCTTCTGGCAGTAATGGAGTTGAAG...GATCTTTACTAAACAGGTTAATGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp ATCATACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTCTGCTGCAGCACCTaGAATTTCTTGCAAGCGATC +
Preference number: 4 (lower is better)
Translates to: IIQNNLQPSKQLMHLLRDLCCST*NFLQAI
Trigger: GATCGCTTGCAAGAAATTGCAGGTGCTGCAGCAGAG...ATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGTATGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp CACCACTATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCACTCTGCTGCAGCACCTaGAATTTCTTGCAAGCGATC +
Preference number: 4 (lower is better)
Translates to: HHYSNPQCNSYLLSIRCSLCCST*NFLQAI
Trigger: GATCGCTTGCAAGAAATTGCAGGTGCTGCAGCAGAG...TGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATAGTGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp CACCACTATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCAGGAGGCACAGCAAACTaGCTAACATGTTCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: HHYSNPQCNSYLLSIRCSGGTAN*LTCSLL
Trigger: CAGCAGAGAACATGTTAGGCAGTTTGCTGTGCCTCC...TGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATAGTGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp GCCCAAAGACGAGAGAACCTGCTTGTTAGCTCATTAACCTGTTTAGTAAAGATCCCCCAAAATCAGAGCTaGACTCAGATCTCAGGTCTT +
Preference number: 4 (lower is better)
Translates to: AQRRENLLVSSLTCLVKIPQNQS*TQISGL
Trigger: AAGACCTGAGATCTGAGTGCAGCTCTGATTTTGGGG...GATCTTTACTAAACAGGTTAATGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp TCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCTGATTCATCATCGCTATCTTTaGGTTCTTCAGTCTCTCCTC +
Preference number: 4 (lower is better)
Translates to: SSAFKAADAPSQRSVCLIHHRYL*VLQSLL
Trigger: GAGGAGAGACTGAAGAACGCAAAGATAGCGATGATG...AATCAGACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp CCTCCATTTCAGCTGGAGTTAAAACATGGGAACCAAAGTTTGGCAACCTGGCCTTGTCTTAAGTACATCTaGATTGAGCCTCTGAATGAG +
Preference number: 4 (lower is better)
Translates to: PPFQLELKHGNQSLATWPCLKYI*IEPLNE
Trigger: CTCATTCAGAGGCTCAATGCAGATGTACTTAAGACA...AGGCCAGGTTGCCAAACTTTGGTTCCCATGTTTTAACTCCAGCTGAAATGGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497580.5
CDS-3UTR GCA 90 bp ATCATACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCCGTATCATCAGATGTaGTACCCAGTCCAGAACAGC +
Preference number: 4 (lower is better)
Translates to: IIQNNLQPSKQLMHLLRDPYHQM*YPVQNS
Trigger: GCTGTTCTGGACTGGGTAGCACATCTGATGATACGG...ATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGTATGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp TATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCATTAATGAGCCACCTGAGCTTGTaGACTGAGTCTAGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: YSNPQCNSYLLSIRCSLMSHLSL*TESRAG
Trigger: CCCAGCCCTAGACTCAGTGCACAAGCTCAGGTGGCT...CATTAATGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp GGAGCTCTGTCTGGGATTTCTGCAGTATATTATTTCGGAGGAGAAGAACCACCATGTACTTTCATAGTTTaGCATTGCTCCATCACTGGG +
Preference number: 4 (lower is better)
Translates to: GALSGISAVYYFGGEEPPCTFIV*HCSITG
Trigger: CCCAGTGATGGAGCAATGGCAAACTATGAAAGTACA...TGGTGGTTCTTCTCCTCCGAAATAATATACTGCAGAAATCCCAGACAGAGCTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR GCA 90 bp ATGCAACTCAGAAAGGAAAGAGCCCAAAGACGAGAGAACCTGCTTGTTAGCTCATGTACTTTCATAGTTTaGCATTGCTCCATCACTGGG +
Preference number: 4 (lower is better)
Translates to: MQLRKERAQRRENLLVSSCTFIV*HCSITG
Trigger: CCCAGTGATGGAGCAATGGCAAACTATGAAAGTACA...TGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGCTCTTTCCTTTCTGAGTTGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp GCCCAAAGACGAGAGAACCTGCTTGTTAGCTCATTAACCTGTTTAGTAAAGATCACGGGGAGAATCATGTaGACTTTCACCATCACCCAT +
Preference number: 4 (lower is better)
Translates to: AQRRENLLVSSLTCLVKITGRIM*TFTITH
Trigger: ATGGGTGATGGTGAAAGTGCACATGATTCTCCCCGT...GATCTTTACTAAACAGGTTAATGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp TGCTTAACATTTACTGAATCAAAGGCTGAAGTAAATGGACTCTCATCTAGGTCTGTGGGCTGCTTGGCTTaGAGAGTCTGGGAGATCATC +
Preference number: 4 (lower is better)
Translates to: CLTFTESKAEVNGLSSRSVGCLA*RVWEII
Trigger: GATGATCTCCCAGACTCTGCAAGCCAAGCAGCCCAC...AGACCTAGATGAGAGTCCATTTACTTCAGCCTTTGATTCAGTAAATGTTAAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR GCA 90 bp AGTAATCGCAAATACCTCATCACTGTTAATCCACTTACTAAAAATCCTTTGGGCGTGGGCTGCTTGGCTTaGAGAGTCTGGGAGATCATC +
Preference number: 4 (lower is better)
Translates to: SNRKYLITVNPLTKNPLGVGCLA*RVWEII
Trigger: GATGATCTCCCAGACTCTGCAAGCCAAGCAGCCCAC...GCCCAAAGGATTTTTAGTAAGTGGATTAACAGTGATGAGGTATTTGCGATTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR GCA 90 bp ATGCAACTCAGAAAGGAAAGAGCCCAAAGACGAGAGAACCTGCTTGTTAGCTCAAGTTTTATCGTCAGCTaGGGTGAGTTTCTGAAAGTC +
Preference number: 4 (lower is better)
Translates to: MQLRKERAQRRENLLVSSSFIVS*GEFLKV
Trigger: GACTTTCAGAAACTCACCGCAGCTGACGATAAAACT...TGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGCTCTTTCCTTTCTGAGTTGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp ACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTGACATCCTGGGCCATTaGACCATAAAGAAACTGCAG +
Preference number: 4 (lower is better)
Translates to: TKQSSAFKAADAPSQRSVDILGH*TIKKLQ
Trigger: CTGCAGTTTCTTTATGGTGCAATGGCCCAGGATGTC...AACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp AAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTGACATCCTGGGCCATTaGACCATAAAGAAACTGCAG +
Preference number: 4 (lower is better)
Translates to: KQSSAFKAADAPSQRSVCDILGH*TIKKLQ
Trigger: CTGCAGTTTCTTTATGGTGCAATGGCCCAGGATGTC...ACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp ATGTCATGTATGGTAATCAGTCTATCTCCTAATGCAGGCTCACAAACTTCCACGGACATCCTGGGCCATTaGACCATAAAGAAACTGCAG +
Preference number: 4 (lower is better)
Translates to: MSCMVISLSPNAGSQTSTDILGH*TIKKLQ
Trigger: CTGCAGTTTCTTTATGGTGCAATGGCCCAGGATGTC...CGTGGAAGTTTGTGAGCCTGCATTAGGAGATAGACTGATTACCATACATGACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR GCA 90 bp ATCATACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATTCTTCACTCGCGTTTTaGCATATGACATCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: IIQNNLQPSKQLMHLLRDSSLAF*HMTSWA
Trigger: GGCCCAGGATGTCATATGGCAAAACGCGAGTGAAGA...ATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGTATGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp GCCCAAAGACGAGAGAACCTGCTTGTTAGCTCATTAACCTGTTTAGTAAAGATCCTCAATGGCCAGCTGTaGATCTTGAAGCTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: AQRRENLLVSSLTCLVKILNGQL*ILKLFF
Trigger: GAAGAACAGCTTCAAGATGCACAGCTGGCCATTGAG...GATCTTTACTAAACAGGTTAATGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp GTAGTACTAGTCTCTACTTGGGGACAAGAAAATAGAATATGCAACTCAGAAAGGAGCACATTCTCAGGATaGACTGCACTTTGTCCCGGG +
Preference number: 4 (lower is better)
Translates to: VVLVSTWGQENRICNSERSTFSG*TALCPG
Trigger: CCCGGGACAAAGTGCAGTGCATCCTGAGAATGTGCT...CCTTTCTGAGTTGCATATTCTATTTTCTTGTCCCCAAGTAGAGACTAGTACTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp GATGCACCTTCTCAGAGATCTGTTTGTCTGATTAACAGTCTGCTGCCTTGGTGGCAAACAGGGTGGATTTaGCTTTATCAACACAAACAC +
Preference number: 4 (lower is better)
Translates to: DAPSQRSVCLINSLLPWWQTGWI*LYQHKH
Trigger: GTGTTTGTGTTGATAAAGGCAAATCCACCCTGTTTG...CCACCAAGGCAGCAGACTGTTAATCAGACAAACAGATCTCTGAGAAGGTGCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp GCTTTGGTGTGCCTCCATGGCCAATTTTTCAGGCACCAAAACCCATTCCTGATTCAAACAGGGTGGATTTaGCTTTATCAACACAAACAC +
Preference number: 4 (lower is better)
Translates to: ALVCLHGQFFRHQNPFLIQTGWI*LYQHKH
Trigger: GTGTTTGTGTTGATAAAGGCAAATCCACCCTGTTTG...AATCAGGAATGGGTTTTGGTGCCTGAAAAATTGGCCATGGAGGCACACCAAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR GCA 90 bp ATGCAACTCAGAAAGGAAAGAGCCCAAAGACGAGAGAACCTGCTTGTTAGCTCAAATGAATTCTACTGCTaGTGTGAACTGCATCCACCA +
Preference number: 4 (lower is better)
Translates to: MQLRKERAQRRENLLVSSNEFYC*CELHPP
Trigger: TGGTGGATGCAGTTCACAGCAGCAGTAGAATTCATT...TGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGCTCTTTCCTTTCTGAGTTGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp GGAGCTCTGTCTGGGATTTCTGCAGTATATTATTTCGGAGGAGAAGAACCACCACCCTGTGAATCAAACTaGTCTCCCCTTTTAATCAGT +
Preference number: 4 (lower is better)
Translates to: GALSGISAVYYFGGEEPPPCESN*SPLLIS
Trigger: ACTGATTAAAAGGGGAGAGCAGTTTGATTCACAGGG...TGGTGGTTCTTCTCCTCCGAAATAATATACTGCAGAAATCCCAGACAGAGCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR CCA 90 bp ATGCAACTCAGAAAGGAAAGAGCCCAAAGACGAGAGAACCTGCTTGTTAGCTCATTTTATTTGCTGGAGTaGTTGCTGGAGATAGCTGAG +
Preference number: 4 (lower is better)
Translates to: MQLRKERAQRRENLLVSSFYLLE*LLEIAE
Trigger: CTCAGCTATCTCCAGCAACCACTCCAGCAAATAAAA...TGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGCTCTTTCCTTTCTGAGTTGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp ATCATACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATATCCCTGGAGTAAGCTaGGGACCTGTACCTAAGGAA +
Preference number: 4 (lower is better)
Translates to: IIQNNLQPSKQLMHLLRDIPGVS*GPVPKE
Trigger: TTCCTTAGGTACAGGTCCCCAGCTTACTCCAGGGAT...ATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGTATGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp CACCACTATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCAATCCCTGGAGTAAGCTaGGGACCTGTACCTAAGGAA +
Preference number: 4 (lower is better)
Translates to: HHYSNPQCNSYLLSIRCSIPGVS*GPVPKE
Trigger: TTCCTTAGGTACAGGTCCCCAGCTTACTCCAGGGAT...TGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATAGTGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp GCCCAAAGACGAGAGAACCTGCTTGTTAGCTCATTAACCTGTTTAGTAAAGATCACAGTGGATCAAACATaGCCAGCAGAGACTCTGACT +
Preference number: 4 (lower is better)
Translates to: AQRRENLLVSSLTCLVKITVDQT*PAETLT
Trigger: AGTCAGAGTCTCTGCTGGCCATGTTTGATCCACTGT...GATCTTTACTAAACAGGTTAATGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp CCCAAAATCAGAGCTGCACTCAGATCTCAGGTCTTCAATCTTATTGGGAATATCACAGTGGATCAAACATaGCCAGCAGAGACTCTGACT +
Preference number: 4 (lower is better)
Translates to: PKIRAALRSQVFNLIGNITVDQT*PAETLT
Trigger: AGTCAGAGTCTCTGCTGGCCATGTTTGATCCACTGT...GATATTCCCAATAAGATTGAAGACCTGAGATCTGAGTGCAGCTCTGATTTTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR CCA 90 bp ACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTAGCATAGTGAACCTTTaGCCTTACCACAGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: TKQSSAFKAADAPSQRSVSIVNL*PYHSRS
Trigger: GCTTCTGCTGTGGTAAGGCCAAAGGTTCACTATGCT...AACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp GCCCAAAGACGAGAGAACCTGCTTGTTAGCTCATTAACCTGTTTAGTAAAGATCAGCATAGTGAACCTTTaGCCTTACCACAGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: AQRRENLLVSSLTCLVKISIVNL*PYHSRS
Trigger: GCTTCTGCTGTGGTAAGGCCAAAGGTTCACTATGCT...GATCTTTACTAAACAGGTTAATGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp ATCATACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATTGGTGGTGGATGCGATaGCCTAGCATAGTGAACCTT +
Preference number: 4 (lower is better)
Translates to: IIQNNLQPSKQLMHLLRDWWWMR*PSIVNL
Trigger: AAGGTTCACTATGCTAGGCCATCGCATCCACCACCA...ATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGTATGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp AGTAATCGCAAATACCTCATCACTGTTAATCCACTTACTAAAAATCCTTTGGGCTGGGGGATCTGGTGGTaGATGCGATGGCCTAGCATA +
Preference number: 4 (lower is better)
Translates to: SNRKYLITVNPLTKNPLGWGIWW*MRWPSI
Trigger: TATGCTAGGCCATCGCATCCACCACCAGATCCCCCA...GCCCAAAGGATTTTTAGTAAGTGGATTAACAGTGATGAGGTATTTGCGATTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR CCA 90 bp TGCTTAACATTTACTGAATCAAAGGCTGAAGTAAATGGACTCTCATCTAGGTCTAGCTCCTTCCAGGATTaGGGGATCTGGTGGTGGATG +
Preference number: 4 (lower is better)
Translates to: CLTFTESKAEVNGLSSRSSSFQD*GIWWWM
Trigger: CATCCACCACCAGATCCCCCAATCCTGGAAGGAGCT...AGACCTAGATGAGAGTCCATTTACTTCAGCCTTTGATTCAGTAAATGTTAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR CCA 90 bp ACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTATGGGAACCAAAGTTTaGCAACCTGGCCTCATTTCC +
Preference number: 4 (lower is better)
Translates to: TKQSSAFKAADAPSQRSVMGTKV*QPGLIS
Trigger: GGAAATGAGGCCAGGTTGCCAAACTTTGGTTCCCAT...AACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp AAGGTCTGTTCCTGTCTGATTTCTCATCATCGCTATCTTTGCGTTCTTCAGTCTATGGGAACCAAAGTTTaGCAACCTGGCCTCATTTCC +
Preference number: 4 (lower is better)
Translates to: KVCSCLISHHRYLCVLQSMGTKV*QPGLIS
Trigger: GGAAATGAGGCCAGGTTGCCAAACTTTGGTTCCCAT...AGACTGAAGAACGCAAAGATAGCGATGATGAGAAATCAGACAGGAACAGACCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR CCA 90 bp GGAGCTCTGTCTGGGATTTCTGCAGTATATTATTTCGGAGGAGAAGAACCACCAGCTGGAGTTAAAACATaGGAACCAAAGTTTGGCAAC +
Preference number: 4 (lower is better)
Translates to: GALSGISAVYYFGGEEPPAGVKT*EPKFGN
Trigger: GTTGCCAAACTTTGGTTCCCATGTTTTAACTCCAGC...TGGTGGTTCTTCTCCTCCGAAATAATATACTGCAGAAATCCCAGACAGAGCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR CCA 90 bp TGCTTAACATTTACTGAATCAAAGGCTGAAGTAAATGGACTCTCATCTAGGTCTCCAGGTGAGCCTGTGTaGTCTGTAGTCCTTGTCGAC +
Preference number: 4 (lower is better)
Translates to: CLTFTESKAEVNGLSSRSPGEPV*SVVLVD
Trigger: GTCGACAAGGACTACAGACCACACAGGCTCACCTGG...AGACCTAGATGAGAGTCCATTTACTTCAGCCTTTGATTCAGTAAATGTTAAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR CCA 90 bp ATGCAACTCAGAAAGGAAAGAGCCCAAAGACGAGAGAACCTGCTTGTTAGCTCAAGACAGCAAACAGGGTaGATTTGCCTTTATCAACAC +
Preference number: 4 (lower is better)
Translates to: MQLRKERAQRRENLLVSSRQQTG*ICLYQH
Trigger: GTGTTGATAAAGGCAAATCCACCCTGTTTGCTGTCT...TGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGCTCTTTCCTTTCTGAGTTGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp GTAGTACTAGTCTCTACTTGGGGACAAGAAAATAGAATATGCAACTCAGAAAGGGGTGGGCCTTGGTCTTaGTCACTTTCGGTCATCGAT +
Preference number: 4 (lower is better)
Translates to: VVLVSTWGQENRICNSERGGPWS*SLSVID
Trigger: ATCGATGACCGAAAGTGACCAAGACCAAGGCCCACC...CCTTTCTGAGTTGCATATTCTATTTTCTTGTCCCCAAGTAGAGACTAGTACTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp AGTAATCGCAAATACCTCATCACTGTTAATCCACTTACTAAAAATCCTTTGGGCAACAGTCTGCTGCCTTaGTGGGCCTTGGTCTTGGTC +
Preference number: 4 (lower is better)
Translates to: SNRKYLITVNPLTKNPLGNSLLP*WALVLV
Trigger: GACCAAGACCAAGGCCCACCAAGGCAGCAGACTGTT...GCCCAAAGGATTTTTAGTAAGTGGATTAACAGTGATGAGGTATTTGCGATTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR CCA 90 bp GATGCACCTTCTCAGAGATCTGTTTGTCTGATTAACAGTCTGCTGCCTTGGTGGGTAAGGAGCTCTGTCTaGGATTTCTGCAGTATATTA +
Preference number: 4 (lower is better)
Translates to: DAPSQRSVCLINSLLPWWVRSSV*DFCSIL
Trigger: TAATATACTGCAGAAATCCCAGACAGAGCTCCTTAC...CCACCAAGGCAGCAGACTGTTAATCAGACAAACAGATCTCTGAGAAGGTGCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR CCA 90 bp GCTTTGGTGTGCCTCCATGGCCAATTTTTCAGGCACCAAAACCCATTCCTGATTGTAAGGAGCTCTGTCTaGGATTTCTGCAGTATATTA +
Preference number: 4 (lower is better)
Translates to: ALVCLHGQFFRHQNPFLIVRSSV*DFCSIL
Trigger: TAATATACTGCAGAAATCCCAGACAGAGCTCCTTAC...AATCAGGAATGGGTTTTGGTGCCTGAAAAATTGGCCATGGAGGCACACCAAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR CCA 90 bp GCCCAAAGACGAGAGAACCTGCTTGTTAGCTCATTAACCTGTTTAGTAAAGATCTTTGGTGTGCCTCCATaGCCAATTTTTCAGGCACCA +
Preference number: 4 (lower is better)
Translates to: AQRRENLLVSSLTCLVKIFGVPP*PIFQAP
Trigger: TGGTGCCTGAAAAATTGGCCATGGAGGCACACCAAA...GATCTTTACTAAACAGGTTAATGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR CCA 90 bp ATGTCATGTATGGTAATCAGTCTATCTCCTAATGCAGGCTCACAAACTTCCACGAGAAAATCTAGTTTCTaGCTGGGCAGGGTGGTTCAC +
Preference number: 4 (lower is better)
Translates to: MSCMVISLSPNAGSQTSTRKSSF*LGRVVH
Trigger: GTGAACCACCCTGCCCAGCCAGAAACTAGATTTTCT...CGTGGAAGTTTGTGAGCCTGCATTAGGAGATAGACTGATTACCATACATGACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR CCA 90 bp AAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTAGAAAATCTAGTTTCTaGCTGGGCAGGGTGGTTCAC +
Preference number: 4 (lower is better)
Translates to: KQSSAFKAADAPSQRSVCRKSSF*LGRVVH
Trigger: GTGAACCACCCTGCCCAGCCAGAAACTAGATTTTCT...ACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR CCA 90 bp TGCTTAACATTTACTGAATCAAAGGCTGAAGTAAATGGACTCTCATCTAGGTCTCAGATGTCAAATCTCTaGGGGGTCTACCCTCAGCCC +
Preference number: 4 (lower is better)
Translates to: CLTFTESKAEVNGLSSRSQMSNL*GVYPQP
Trigger: GGGCTGAGGGTAGACCCCCCAGAGATTTGACATCTG...AGACCTAGATGAGAGTCCATTTACTTCAGCCTTTGATTCAGTAAATGTTAAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR CCA 90 bp ATGCAACTCAGAAAGGAAAGAGCCCAAAGACGAGAGAACCTGCTTGTTAGCTCAATACATATAATTTTGTaGTTGGGCACGGTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: MQLRKERAQRRENLLVSSIHIIL*LGTVAH
Trigger: GTGAGCCACCGTGCCCAACCACAAAATTATATGTAT...TGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGCTCTTTCCTTTCTGAGTTGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR CCA 90 bp TCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCTGATTGCACTAGAAGACAGCTaGATTCTCATGTCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: SSAFKAADAPSQRSVCLIALEDS*ILMSAS
Trigger: AGAAGCAGACATGAGAATCCAGCTGTCTTCTAGTGC...AATCAGACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394105.6
CDS-3UTR TCA 90 bp TTTACCCCCAAAATCAGAGCTGCACTCAGATCTCAGGTCTTCAATCTTATTGGGCATGTAAAGTGGCTGTaGGGAAAAGTTTGGCAGAAA +
Preference number: 4 (lower is better)
Translates to: FTPKIRAALRSQVFNLIGHVKWL*GKVWQK
Trigger: TTTCTGCCAAACTTTTCCTCACAGCCACTTTACATG...CCCAATAAGATTGAAGACCTGAGATCTGAGTGCAGCTCTGATTTTGGGGGTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR TCA 90 bp ATGTCATGTATGGTAATCAGTCTATCTCCTAATGCAGGCTCACAAACTTCCACGGGATCTGTTTCCAGGTaGTCTTCATCTTCAACAAGC +
Preference number: 4 (lower is better)
Translates to: MSCMVISLSPNAGSQTSTGSVSR*SSSSTS
Trigger: GCTTGTTGAAGATGAAGATCACCTGGAAACAGATCC...CGTGGAAGTTTGTGAGCCTGCATTAGGAGATAGACTGATTACCATACATGACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR TCA 90 bp ACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTAAGAGTTTTTCCTGCTaGGATGGAGAGAACCTCTCA +
Preference number: 4 (lower is better)
Translates to: TKQSSAFKAADAPSQRSVKSFSC*DGENLS
Trigger: TGAGAGGTTCTCTCCATCTCAGCAGGAAAAACTCTT...AACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp ACGCTTAGTATGCTGAAGGGTACTAGTCTCTTCTTGCTCTCCCTAACTAAACTAAAGAGTTTTTCCTGCTaGGATGGAGAGAACCTCTCA +
Preference number: 4 (lower is better)
Translates to: TLSMLKGTSLFLLSLTKLKSFSC*DGENLS
Trigger: TGAGAGGTTCTCTCCATCTCAGCAGGAAAAACTCTT...TAGTTTAGTTAGGGAGAGCAAGAAGAGACTAGTACCCTTCAGCATACTAAGCGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394084.5
CDS-3UTR TCA 90 bp CTGCACTCAGATCTCAGGTCTTCAATCTTATTGGGAATATCCTCAGAGGTTGCACTTGAACTTTTTGCCTaGATCTATCTGAGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: LHSDLRSSILLGISSEVALELFA*IYLSPS
Trigger: AGAAGGGCTCAGATAGATTCAGGCAAAAAGTTCAAG...TGCAACCTCTGAGGATATTCCCAATAAGATTGAAGACCTGAGATCTGAGTGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR TCA 90 bp TCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCTGATTCTTGAACTTTTTGCCTaGATCTATCTGAGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: SSAFKAADAPSQRSVCLILELFA*IYLSPS
Trigger: AGAAGGGCTCAGATAGATTCAGGCAAAAAGTTCAAG...AATCAGACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp TCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCTGATTAGGGTTTTGTACATCTaGGACACGATCCACCTTAAA +
Preference number: 4 (lower is better)
Translates to: SSAFKAADAPSQRSVCLIRVLYI*DTIHLK
Trigger: TTTAAGGTGGATCGTGTCTCAGATGTACAAAACCCT...AATCAGACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp ACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTCTATCTTCTCTCAGTTaGTCTCCAGACATCACACTC +
Preference number: 4 (lower is better)
Translates to: TKQSSAFKAADAPSQRSVLSSLS*SPDITL
Trigger: GAGTGTGATGTCTGGAGATCAACTGAGAGAAGATAG...AACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp ACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTCTGTACCTAAGGAAATaGCCAACACCTCTTCTGGTT +
Preference number: 4 (lower is better)
Translates to: TKQSSAFKAADAPSQRSVLYLRK*PTPLLV
Trigger: AACCAGAAGAGGTGTTGGTCATTTCCTTAGGTACAG...AACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp ACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTAAGAATGCCTTTGCTTaGATGCCTCCATTTCAGCTG +
Preference number: 4 (lower is better)
Translates to: TKQSSAFKAADAPSQRSVKNAFA*MPPFQL
Trigger: CAGCTGAAATGGAGGCATTCAAGCAAAGGCATTCTT...AACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp GCCCAAAGACGAGAGAACCTGCTTGTTAGCTCATTAACCTGTTTAGTAAAGATCGATGAAGATGATGAATaGGGTGCAGCCACCAAAGAA +
Preference number: 4 (lower is better)
Translates to: AQRRENLLVSSLTCLVKIDEDDE*GAATKE
Trigger: TTCTTTGGTGGCTGCACCTCATTCATCATCTTCATC...GATCTTTACTAAACAGGTTAATGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp ATCATACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATTCTGCATTGAGCCTCTaGATGAGCTGTTTCTCAGAG +
Preference number: 4 (lower is better)
Translates to: IIQNNLQPSKQLMHLLRDSALSL*MSCFSE
Trigger: CTCTGAGAAACAGCTCATTCAGAGGCTCAATGCAGA...ATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGTATGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp GTAGTACTAGTCTCTACTTGGGGACAAGAAAATAGAATATGCAACTCAGAAAGGATATCCTCAGCCACCTaGGCTTGTGCACTGAGTCTA +
Preference number: 4 (lower is better)
Translates to: VVLVSTWGQENRICNSERISSAT*ACALSL
Trigger: TAGACTCAGTGCACAAGCTCAGGTGGCTGAGGATAT...CCTTTCTGAGTTGCATATTCTATTTTCTTGTCCCCAAGTAGAGACTAGTACTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp AAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCTTGTCGACAACGAGTaGGATAAGCAATATATGGGG +
Preference number: 4 (lower is better)
Translates to: KQSSAFKAADAPSQRSVCLVDNE*DKQYMG
Trigger: CCCCATATATTGCTTATCTCACTCGTTGTCGACAAG...ACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp ATGTCATGTATGGTAATCAGTCTATCTCCTAATGCAGGCTCACAAACTTCCACGCTTGTCGACAACGAGTaGGATAAGCAATATATGGGG +
Preference number: 4 (lower is better)
Translates to: MSCMVISLSPNAGSQTSTLVDNE*DKQYMG
Trigger: CCCCATATATTGCTTATCTCACTCGTTGTCGACAAG...CGTGGAAGTTTGTGAGCCTGCATTAGGAGATAGACTGATTACCATACATGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR TCA 90 bp GCCCAAAGACGAGAGAACCTGCTTGTTAGCTCATTAACCTGTTTAGTAAAGATCCTTGTCGACAACGAGTaGGATAAGCAATATATGGGG +
Preference number: 4 (lower is better)
Translates to: AQRRENLLVSSLTCLVKILVDNE*DKQYMG
Trigger: CCCCATATATTGCTTATCTCACTCGTTGTCGACAAG...GATCTTTACTAAACAGGTTAATGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp GTAGTACTAGTCTCTACTTGGGGACAAGAAAATAGAATATGCAACTCAGAAAGGAATAGCCTTTCCAGGTaGGCCTGTGTGGTCTGTAGT +
Preference number: 4 (lower is better)
Translates to: VVLVSTWGQENRICNSERNSLSR*ACVVCS
Trigger: ACTACAGACCACACAGGCTCACCTGGAAAGGCTATT...CCTTTCTGAGTTGCATATTCTATTTTCTTGTCCCCAAGTAGAGACTAGTACTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp ACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTATCGTCAGCTGCGGTaGGTTTCTGAAAGTCTTGAA +
Preference number: 4 (lower is better)
Translates to: TKQSSAFKAADAPSQRSVYRQLR*VSESLE
Trigger: TTCAAGACTTTCAGAAACTCACCGCAGCTGACGATA...AACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp ATCATACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTCTGGATATGTTCATaGAGAACCTGGTCGCGAAGT +
Preference number: 4 (lower is better)
Translates to: IIQNNLQPSKQLMHLLRDLWICS*RTWSRS
Trigger: ACTTCGCGACCAGGTTCTTCATGAACATATCCAGAG...ATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGTATGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp AAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTTATTGTCCTGATTTCTaGTTGTGCAGATGGCCATGG +
Preference number: 4 (lower is better)
Translates to: KQSSAFKAADAPSQRSVCYCPDF*LCRWPW
Trigger: CCATGGCCATCTGCACAATCAGAAATCAGGACAATA...ACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp GTAGTACTAGTCTCTACTTGGGGACAAGAAAATAGAATATGCAACTCAGAAAGGAGCCTTCAAAGCAGCTaGTGCACCTTCTCAGAGATC +
Preference number: 4 (lower is better)
Translates to: VVLVSTWGQENRICNSERSLQSS*CTFSEI
Trigger: GATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCT...CCTTTCTGAGTTGCATATTCTATTTTCTTGTCCCCAAGTAGAGACTAGTACTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp GGAGCTCTGTCTGGGATTTCTGCAGTATATTATTTCGGAGGAGAAGAACCACCAAACCACCATAAAGTATaGGCTATCCACTGTTCCTTT +
Preference number: 4 (lower is better)
Translates to: GALSGISAVYYFGGEEPPNHHKV*AIHCSF
Trigger: AAAGGAACAGTGGATAGCTCATACTTTATGGTGGTT...TGGTGGTTCTTCTCCTCCGAAATAATATACTGCAGAAATCCCAGACAGAGCTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR TCA 90 bp CACCACTATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCAAGTGAAACCAGACAGTaGTGGCCCATGTACAAGACT +
Preference number: 4 (lower is better)
Translates to: HHYSNPQCNSYLLSIRCSSETRQ*WPMYKT
Trigger: AGTCTTGTACATGGGCCATCACTGTCTGGTTTCACT...TGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATAGTGGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR TCA 90 bp CACCACTATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCAACACAGCTGGCCTCGTaGTGTATTTACGATGGGATT +
Preference number: 4 (lower is better)
Translates to: HHYSNPQCNSYLLSIRCSTQLAS*CIYDGI
Trigger: AATCCCATCGTAAATACATCACGAGGCCAGCTGTGT...TGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATAGTGGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR TCA 90 bp TATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCATTAATGCCCCCGTATTGGGGCTaGGATTGTTCTCTTGCTCAC +
Preference number: 4 (lower is better)
Translates to: YSNPQCNSYLLSIRCSLMPPYWG*DCSLAH
Trigger: GTGAGCAAGAGAACAATCTCAGCCCCAATACGGGGG...CATTAATGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR TCA 90 bp TATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCATTAATGGAATTGAACCCTTGCTaGGCTCAGGCCTGTGGGATG +
Preference number: 4 (lower is better)
Translates to: YSNPQCNSYLLSIRCSLMELNPC*AQACGM
Trigger: CATCCCACAGGCCTGAGCTCAGCAAGGGTTCAATTC...CATTAATGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR TCA 90 bp GATGCACCTTCTCAGAGATCTGTTTGTCTGATTAACAGTCTGCTGCCTTGGTGGCTCAAATCTCTGTCATaGTTATCACCTGTACTTTCA +
Preference number: 4 (lower is better)
Translates to: DAPSQRSVCLINSLLPWWLKSLS*LSPVLS
Trigger: TGAAAGTACAGGTGATAATCATGACAGAGATTTGAG...CCACCAAGGCAGCAGACTGTTAATCAGACAAACAGATCTCTGAGAAGGTGCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394104.6
ENST00000495955.5
CDS-3UTR GCA 90 bp GTAGTACTAGTCTCTACTTGGGGACAAGAAAATAGAATATGCAACTCAGAAAGGGAGATCAGTACACATTaGCCTGACCTCCCCAACTTC +
Preference number: 4 (lower is better)
Translates to: VVLVSTWGQENRICNSEREISTH*PDLPNF
Trigger: GAAGTTGGGGAGGTCAGGGCAATGTGTACTGATCTC...CCTTTCTGAGTTGCATATTCTATTTTCTTGTCCCCAAGTAGAGACTAGTACTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp ATGTCATGTATGGTAATCAGTCTATCTCCTAATGCAGGCTCACAAACTTCCACGTTCTGGATTGACAACTaGAGGACAAATGAAGCAGGC +
Preference number: 4 (lower is better)
Translates to: MSCMVISLSPNAGSQTSTFWIDN*RTNEAG
Trigger: GCCTGCTTCATTTGTCCTGCAGTTGTCAATCCAGAA...CGTGGAAGTTTGTGAGCCTGCATTAGGAGATAGACTGATTACCATACATGACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR GCA 90 bp CCAAAATCAGAGCTGCACTCAGATCTCAGGTCTTCAATCTTATTGGGAATATCCAAAAGGCGGCCTACCTaGATCAGATTAAATCGTGCT +
Preference number: 4 (lower is better)
Translates to: PKSELHSDLRSSILLGISKRRPT*IRLNRA
Trigger: AGCACGATTTAATCTGATGCAGGTAGGCCGCCTTTT...GGATATTCCCAATAAGATTGAAGACCTGAGATCTGAGTGCAGCTCTGATTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR GCA 90 bp ATGTCATGTATGGTAATCAGTCTATCTCCTAATGCAGGCTCACAAACTTCCACGAAAAGGCGGCCTACCTaGATCAGATTAAATCGTGCT +
Preference number: 4 (lower is better)
Translates to: MSCMVISLSPNAGSQTSTKRRPT*IRLNRA
Trigger: AGCACGATTTAATCTGATGCAGGTAGGCCGCCTTTT...CGTGGAAGTTTGTGAGCCTGCATTAGGAGATAGACTGATTACCATACATGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR GCA 90 bp AGTAATCGCAAATACCTCATCACTGTTAATCCACTTACTAAAAATCCTTTGGGCCCAGTCATTGCTAACTaGTGCAAAAGGCGGCCTACC +
Preference number: 4 (lower is better)
Translates to: SNRKYLITVNPLTKNPLGPVIAN*CKRRPT
Trigger: GGTAGGCCGCCTTTTGCAGCAGTTAGCAATGACTGG...GCCCAAAGGATTTTTAGTAAGTGGATTAACAGTGATGAGGTATTTGCGATTACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR GCA 90 bp TGTATCCAGTGTCTATCACAGTGCCTCATGTGCAAGACACATCCACTCTCACAGTATAAACCACAGTTCTaGTCAATCCTTCCAGAAGAT +
Preference number: 4 (lower is better)
Translates to: CIQCLSQCLMCKTHPLSQYKPQF*SILPED
Trigger: ATCTTCTGGAAGGATTGAGCAGAACTGTGGTTTATA...CTGTGAGAGTGGATGTGTCTTGCACATGAGGCACTGTGATAGACACTGGATACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394084.5
CDS-3UTR GCA 90 bp GATGCACCTTCTCAGAGATCTGTTTGTCTGATTAACAGTCTGCTGCCTTGGTGGTATAAACCACAGTTCTaGTCAATCCTTCCAGAAGAT +
Preference number: 4 (lower is better)
Translates to: DAPSQRSVCLINSLLPWWYKPQF*SILPED
Trigger: ATCTTCTGGAAGGATTGAGCAGAACTGTGGTTTATA...CCACCAAGGCAGCAGACTGTTAATCAGACAAACAGATCTCTGAGAAGGTGCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp ATGCAACTCAGAAAGGAAAGAGCCCAAAGACGAGAGAACCTGCTTGTTAGCTCAGAGTCATTTCTAAACTaGTACTTTTTCCTGGCTTGG +
Preference number: 4 (lower is better)
Translates to: MQLRKERAQRRENLLVSSESFLN*YFFLAW
Trigger: CCAAGCCAGGAAAAAGTAGCAGTTTAGAAATGACTC...TGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGCTCTTTCCTTTCTGAGTTGCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp ACACACGAAGTGAAACCAGACAGTGATGGCCCATGTACAAGACTTGTGCTTGAAGAGTCATTTCTAAACTaGTACTTTTTCCTGGCTTGG +
Preference number: 4 (lower is better)
Translates to: THEVKPDSDGPCTRLVLEESFLN*YFFLAW
Trigger: CCAAGCCAGGAAAAAGTAGCAGTTTAGAAATGACTC...TTCAAGCACAAGTCTTGTACATGGGCCATCACTGTCTGGTTTCACTTCGTGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR GCA 90 bp ACACACGAAGTGAAACCAGACAGTGATGGCCCATGTACAAGACTTGTGCTTGAATCGATTCTTTTTATTTaGTGGAGTGGTTGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: THEVKPDSDGPCTRLVLESILFI*WSGCWR
Trigger: TCTCCAGCAACCACTCCAGCAAATAAAAAGAATCGA...TTCAAGCACAAGTCTTGTACATGGGCCATCACTGTCTGGTTTCACTTCGTGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR GCA 90 bp GTAGTACTAGTCTCTACTTGGGGACAAGAAAATAGAATATGCAACTCAGAAAGGCCATTAGCATATTGGTaGGGCTTCTGCTCCGAGTTG +
Preference number: 4 (lower is better)
Translates to: VVLVSTWGQENRICNSERPLAYW*GFCSEL
Trigger: CAACTCGGAGCAGAAGCCGCACCAATATGCTAATGG...CCTTTCTGAGTTGCATATTCTATTTTCTTGTCCCCAAGTAGAGACTAGTACTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp AAGGTCTGTTCCTGTCTGATTTCTCATCATCGCTATCTTTGCGTTCTTCAGTCTCCTCCATCCGAAAGCTaGATGTTTAGGACCTCATTT +
Preference number: 4 (lower is better)
Translates to: KVCSCLISHHRYLCVLQSPPSES*MFRTSF
Trigger: AAATGAGGTCCTAAACATGCAGCTTTCGGATGGAGG...AGACTGAAGAACGCAAAGATAGCGATGATGAGAAATCAGACAGGAACAGACCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR GCA 90 bp GCCCAAAGACGAGAGAACCTGCTTGTTAGCTCATTAACCTGTTTAGTAAAGATCCCTCCATCCGAAAGCTaGATGTTTAGGACCTCATTT +
Preference number: 4 (lower is better)
Translates to: AQRRENLLVSSLTCLVKIPPSES*MFRTSF
Trigger: AAATGAGGTCCTAAACATGCAGCTTTCGGATGGAGG...GATCTTTACTAAACAGGTTAATGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp CCCAAAATCAGAGCTGCACTCAGATCTCAGGTCTTCAATCTTATTGGGAATATCCCTCCATCCGAAAGCTaGATGTTTAGGACCTCATTT +
Preference number: 4 (lower is better)
Translates to: PKIRAALRSQVFNLIGNIPPSES*MFRTSF
Trigger: AAATGAGGTCCTAAACATGCAGCTTTCGGATGGAGG...GATATTCCCAATAAGATTGAAGACCTGAGATCTGAGTGCAGCTCTGATTTTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR GCA 90 bp CACCACTATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCACTTCCAGATTATCACTaGAGAGGGAAAAGCGCAAGG +
Preference number: 4 (lower is better)
Translates to: HHYSNPQCNSYLLSIRCSLPDYH*RGKSAR
Trigger: CCTTGCGCTTTTCCCTCTGCAGTGATAATCTGGAAG...TGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATAGTGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp CACCACTATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCACTTCAACTCCATTACTaGCAGAAGGTCCTGCTCCAA +
Preference number: 4 (lower is better)
Translates to: HHYSNPQCNSYLLSIRCSLQLHY*QKVLLQ
Trigger: TTGGAGCAGGACCTTCTGGCAGTAATGGAGTTGAAG...TGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATAGTGGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp ATCATACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTTCAACTCCATTACTaGCAGAAGGTCCTGCTCCAA +
Preference number: 4 (lower is better)
Translates to: IIQNNLQPSKQLMHLLRDLQLHY*QKVLLQ
Trigger: TTGGAGCAGGACCTTCTGGCAGTAATGGAGTTGAAG...ATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGTATGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp ATGCAACTCAGAAAGGAAAGAGCCCAAAGACGAGAGAACCTGCTTGTTAGCTCAGCACCTGCAATTTCTTaGAAGCGATCTTCATCAATA +
Preference number: 4 (lower is better)
Translates to: MQLRKERAQRRENLLVSSAPAIS*KRSSSI
Trigger: TATTGATGAAGATCGCTTGCAAGAAATTGCAGGTGC...TGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGCTCTTTCCTTTCTGAGTTGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp GTAGTACTAGTCTCTACTTGGGGACAAGAAAATAGAATATGCAACTCAGAAAGGCTCTGCTGCAGCACCTaGAATTTCTTGCAAGCGATC +
Preference number: 4 (lower is better)
Translates to: VVLVSTWGQENRICNSERLCCST*NFLQAI
Trigger: GATCGCTTGCAAGAAATTGCAGGTGCTGCAGCAGAG...CCTTTCTGAGTTGCATATTCTATTTTCTTGTCCCCAAGTAGAGACTAGTACTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp GCCCAAAGACGAGAGAACCTGCTTGTTAGCTCATTAACCTGTTTAGTAAAGATCAATATCCTCAGAGGTTaGACTTATGCCGGACACAAC +
Preference number: 4 (lower is better)
Translates to: AQRRENLLVSSLTCLVKINILRG*TYAGHN
Trigger: GTTGTGTCCGGCATAAGTGCAACCTCTGAGGATATT...GATCTTTACTAAACAGGTTAATGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp ATGTCATGTATGGTAATCAGTCTATCTCCTAATGCAGGCTCACAAACTTCCACGAATATCCTCAGAGGTTaGACTTATGCCGGACACAAC +
Preference number: 4 (lower is better)
Translates to: MSCMVISLSPNAGSQTSTNILRG*TYAGHN
Trigger: GTTGTGTCCGGCATAAGTGCAACCTCTGAGGATATT...CGTGGAAGTTTGTGAGCCTGCATTAGGAGATAGACTGATTACCATACATGACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR GCA 90 bp AAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTATGCCTTTGCTTGAATaGCTCCATTTCAGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: KQSSAFKAADAPSQRSVCMPLLE*LHFSWS
Trigger: ACTCCAGCTGAAATGGAGGCATTCAAGCAAAGGCAT...ACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp ACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTCTATATCAGAGCTCCTaGTTCGAACTAGTCTCTCAG +
Preference number: 4 (lower is better)
Translates to: TKQSSAFKAADAPSQRSVLYQSS*FELVSQ
Trigger: CTGAGAGACTAGTTCGAAGCAGGAGCTCTGATATAG...AACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp GCCCAAAGACGAGAGAACCTGCTTGTTAGCTCATTAACCTGTTTAGTAAAGATCCTATATCAGAGCTCCTaGTTCGAACTAGTCTCTCAG +
Preference number: 4 (lower is better)
Translates to: AQRRENLLVSSLTCLVKILYQSS*FELVSQ
Trigger: CTGAGAGACTAGTTCGAAGCAGGAGCTCTGATATAG...GATCTTTACTAAACAGGTTAATGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp ATGTCATGTATGGTAATCAGTCTATCTCCTAATGCAGGCTCACAAACTTCCACGCTATATCAGAGCTCCTaGTTCGAACTAGTCTCTCAG +
Preference number: 4 (lower is better)
Translates to: MSCMVISLSPNAGSQTSTLYQSS*FELVSQ
Trigger: CTGAGAGACTAGTTCGAAGCAGGAGCTCTGATATAG...CGTGGAAGTTTGTGAGCCTGCATTAGGAGATAGACTGATTACCATACATGACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR GCA 90 bp AAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCATCATCGCTATCTTTaGGTTCTTCAGTCTCTCCTC +
Preference number: 4 (lower is better)
Translates to: KQSSAFKAADAPSQRSVCHHRYL*VLQSLL
Trigger: GAGGAGAGACTGAAGAACGCAAAGATAGCGATGATG...ACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp ATGCAACTCAGAAAGGAAAGAGCCCAAAGACGAGAGAACCTGCTTGTTAGCTCATGTCTTAAGTACATCTaGATTGAGCCTCTGAATGAG +
Preference number: 4 (lower is better)
Translates to: MQLRKERAQRRENLLVSSCLKYI*IEPLNE
Trigger: CTCATTCAGAGGCTCAATGCAGATGTACTTAAGACA...TGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGCTCTTTCCTTTCTGAGTTGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp GCTTTGGTGTGCCTCCATGGCCAATTTTTCAGGCACCAAAACCCATTCCTGATTAAATTGATTCTCTGTTaGTTCGCAATCCATGCTGTA +
Preference number: 4 (lower is better)
Translates to: ALVCLHGQFFRHQNPFLIKLILC*FAIHAV
Trigger: TACAGCATGGATTGCGAAGCAACAGAGAATCAATTT...AATCAGGAATGGGTTTTGGTGCCTGAAAAATTGGCCATGGAGGCACACCAAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR GCA 90 bp GTAGTACTAGTCTCTACTTGGGGACAAGAAAATAGAATATGCAACTCAGAAAGGCCGTATCATCAGATGTaGTACCCAGTCCAGAACAGC +
Preference number: 4 (lower is better)
Translates to: VVLVSTWGQENRICNSERPYHQM*YPVQNS
Trigger: GCTGTTCTGGACTGGGTAGCACATCTGATGATACGG...CCTTTCTGAGTTGCATATTCTATTTTCTTGTCCCCAAGTAGAGACTAGTACTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp CACCACTATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCATTCATAGTTTGCCATTaGTCCATCACTGGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: HHYSNPQCNSYLLSIRCSFIVCH*SITGAG
Trigger: ACCAGCCCCAGTGATGGAGCAATGGCAAACTATGAA...TGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATAGTGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp TCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCTGATTTGTACTTTCATAGTTTaGCATTGCTCCATCACTGGG +
Preference number: 4 (lower is better)
Translates to: SSAFKAADAPSQRSVCLICTFIV*HCSITG
Trigger: CCCAGTGATGGAGCAATGGCAAACTATGAAAGTACA...AATCAGACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp CACCACTATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCAACGGGGAGAATCATGTaGACTTTCACCATCACCCAT +
Preference number: 4 (lower is better)
Translates to: HHYSNPQCNSYLLSIRCSTGRIM*TFTITH
Trigger: ATGGGTGATGGTGAAAGTGCACATGATTCTCCCCGT...TGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATAGTGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp AGTAATCGCAAATACCTCATCACTGTTAATCCACTTACTAAAAATCCTTTGGGCCGAGATGTTCTGCAGTaGTTCGTCACGGGGAGAATC +
Preference number: 4 (lower is better)
Translates to: SNRKYLITVNPLTKNPLGRDVLQ*FVTGRI
Trigger: GATTCTCCCCGTGACGAAGCACTGCAGAACATCTCG...GCCCAAAGGATTTTTAGTAAGTGGATTAACAGTGATGAGGTATTTGCGATTACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR GCA 90 bp TATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCATTAATGGTGGGCTGCTTGGCTTaGAGAGTCTGGGAGATCATC +
Preference number: 4 (lower is better)
Translates to: YSNPQCNSYLLSIRCSLMVGCLA*RVWEII
Trigger: GATGATCTCCCAGACTCTGCAAGCCAAGCAGCCCAC...CATTAATGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp TATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCATTAATGGAGAAAGCTGAATCCTaGGGGTGGGCTGCTTGGCTT +
Preference number: 4 (lower is better)
Translates to: YSNPQCNSYLLSIRCSLMEKAES*GWAAWL
Trigger: AAGCCAAGCAGCCCACCCGCAGGATTCAGCTTTCTC...CATTAATGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp TCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCTGATTAGTTTTATCGTCAGCTaGGGTGAGTTTCTGAAAGTC +
Preference number: 4 (lower is better)
Translates to: SSAFKAADAPSQRSVCLISFIVS*GEFLKV
Trigger: GACTTTCAGAAACTCACCGCAGCTGACGATAAAACT...AATCAGACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp CACCACTATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCAGACATCCTGGGCCATTaGACCATAAAGAAACTGCAG +
Preference number: 4 (lower is better)
Translates to: HHYSNPQCNSYLLSIRCSDILGH*TIKKLQ
Trigger: CTGCAGTTTCTTTATGGTGCAATGGCCCAGGATGTC...TGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATAGTGGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp ATCATACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTCAATGGCCAGCTGTaGATCTTGAAGCTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: IIQNNLQPSKQLMHLLRDLNGQL*ILKLFF
Trigger: GAAGAACAGCTTCAAGATGCACAGCTGGCCATTGAG...ATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGTATGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp GATGCACCTTCTCAGAGATCTGTTTGTCTGATTAACAGTCTGCTGCCTTGGTGGAAGAGCTCTGTGATTTaGAGTCACTACTTTAGACAA +
Preference number: 4 (lower is better)
Translates to: DAPSQRSVCLINSLLPWWKSSVI*SHYFRQ
Trigger: TTGTCTAAAGTAGTGACTGCAAATCACAGAGCTCTT...CCACCAAGGCAGCAGACTGTTAATCAGACAAACAGATCTCTGAGAAGGTGCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp ATCATACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATTGCAGATGGCCATGGTaGTTCTCGAAGATAAACCTC +
Preference number: 4 (lower is better)
Translates to: IIQNNLQPSKQLMHLLRDCRWPW*FSKINL
Trigger: GAGGTTTATCTTCGAGAAGCACCATGGCCATCTGCA...ATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGTATGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp GGAGCTCTGTCTGGGATTTCTGCAGTATATTATTTCGGAGGAGAAGAACCACCAAAGCTACTGATATACTaGACAGTAGACAGCAAACAG +
Preference number: 4 (lower is better)
Translates to: GALSGISAVYYFGGEEPPKLLIY*TVDSKQ
Trigger: CTGTTTGCTGTCTACTGTGCAGTATATCAGTAGCTT...TGGTGGTTCTTCTCCTCCGAAATAATATACTGCAGAAATCCCAGACAGAGCTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR GCA 90 bp GCTTTGGTGTGCCTCCATGGCCAATTTTTCAGGCACCAAAACCCATTCCTGATTTTTAATGAATTCTACTaGTGCTGTGAACTGCATCCA +
Preference number: 4 (lower is better)
Translates to: ALVCLHGQFFRHQNPFLIFNEFY*CCELHP
Trigger: TGGATGCAGTTCACAGCAGCAGTAGAATTCATTAAA...AATCAGGAATGGGTTTTGGTGCCTGAAAAATTGGCCATGGAGGCACACCAAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR GCA 90 bp GCCCAAAGACGAGAGAACCTGCTTGTTAGCTCATTAACCTGTTTAGTAAAGATCAAAGATGCCTGGAAATaGTCCCAACAACAAGGGACT +
Preference number: 4 (lower is better)
Translates to: AQRRENLLVSSLTCLVKIKDAWK*SQQQGT
Trigger: AGTCCCTTGTTGTTGGGAGCATTTCCAGGCATCTTT...GATCTTTACTAAACAGGTTAATGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR GCA 90 bp TATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCATTAATGGCCTCCGTGTTCATCTaGCCGAGGCTGTTTGTCACA +
Preference number: 4 (lower is better)
Translates to: YSNPQCNSYLLSIRCSLMASVFI*PRLFVT
Trigger: TGTGACAAACAGCCTCGGGCAGATGAACACGGAGGC...CATTAATGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR GCA 90 bp TCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCTGATTACCATGCAGCACATTTaGAATCCCTTAGAAAACCTG +
Preference number: 4 (lower is better)
Translates to: SSAFKAADAPSQRSVCLITMQHI*NPLENL
Trigger: CAGGTTTTCTAAGGGATTGCAAATGTGCTGCATGGT...AATCAGACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR GCA 90 bp GATGCACCTTCTCAGAGATCTGTTTGTCTGATTAACAGTCTGCTGCCTTGGTGGTCTCATGTCTGCTTCTaGTTCAATGTGTTGAAAATG +
Preference number: 4 (lower is better)
Translates to: DAPSQRSVCLINSLLPWWSHVCF*FNVLKM
Trigger: CATTTTCAACACATTGAAGCAGAAGCAGACATGAGA...CCACCAAGGCAGCAGACTGTTAATCAGACAAACAGATCTCTGAGAAGGTGCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394105.6
CDS-3UTR CCA 90 bp AGTAATCGCAAATACCTCATCACTGTTAATCCACTTACTAAAAATCCTTTGGGCATTGACGGAAGACAATaGAGGGGTCTCCACTGCACG +
Preference number: 4 (lower is better)
Translates to: SNRKYLITVNPLTKNPLGIDGRQ*RGLHCT
Trigger: CGTGCAGTGGAGACCCCTCCATTGTCTTCCGTCAAT...GCCCAAAGGATTTTTAGTAAGTGGATTAACAGTGATGAGGTATTTGCGATTACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR CCA 90 bp AGTAATCGCAAATACCTCATCACTGTTAATCCACTTACTAAAAATCCTTTGGGCTACTTTTTCCTGGCTTaGCCGGGGGTAGGTTTGCCA +
Preference number: 4 (lower is better)
Translates to: SNRKYLITVNPLTKNPLGYFFLA*PGVGLP
Trigger: TGGCAAACCTACCCCCGGCCAAGCCAGGAAAAAGTA...GCCCAAAGGATTTTTAGTAAGTGGATTAACAGTGATGAGGTATTTGCGATTACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR CCA 90 bp TCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCTGATTTTTTATTTGCTGGAGTaGTTGCTGGAGATAGCTGAG +
Preference number: 4 (lower is better)
Translates to: SSAFKAADAPSQRSVCLIFYLLE*LLEIAE
Trigger: CTCAGCTATCTCCAGCAACCACTCCAGCAAATAAAA...AATCAGACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp ATGCAACTCAGAAAGGAAAGAGCCCAAAGACGAGAGAACCTGCTTGTTAGCTCAGGTCTTCAATCTTATTaGGAATATCCTCAGAGGTTG +
Preference number: 4 (lower is better)
Translates to: MQLRKERAQRRENLLVSSGLQSY*EYPQRL
Trigger: CAACCTCTGAGGATATTCCCAATAAGATTGAAGACC...TGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGCTCTTTCCTTTCTGAGTTGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp ATCATACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATACAGTGGATCAAACATaGCCAGCAGAGACTCTGACT +
Preference number: 4 (lower is better)
Translates to: IIQNNLQPSKQLMHLLRDTVDQT*PAETLT
Trigger: AGTCAGAGTCTCTGCTGGCCATGTTTGATCCACTGT...ATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGTATGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp CACCACTATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCAAGCATAGTGAACCTTTaGCCTTACCACAGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: HHYSNPQCNSYLLSIRCSSIVNL*PYHSRS
Trigger: GCTTCTGCTGTGGTAAGGCCAAAGGTTCACTATGCT...TGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATAGTGGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp ATCATACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATAGCATAGTGAACCTTTaGCCTTACCACAGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: IIQNNLQPSKQLMHLLRDSIVNL*PYHSRS
Trigger: GCTTCTGCTGTGGTAAGGCCAAAGGTTCACTATGCT...ATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGTATGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp GTAGTACTAGTCTCTACTTGGGGACAAGAAAATAGAATATGCAACTCAGAAAGGTGGTGGTGGATGCGATaGCCTAGCATAGTGAACCTT +
Preference number: 4 (lower is better)
Translates to: VVLVSTWGQENRICNSERWWWMR*PSIVNL
Trigger: AAGGTTCACTATGCTAGGCCATCGCATCCACCACCA...CCTTTCTGAGTTGCATATTCTATTTTCTTGTCCCCAAGTAGAGACTAGTACTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp TATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCATTAATGAGCTCCTTCCAGGATTaGGGGATCTGGTGGTGGATG +
Preference number: 4 (lower is better)
Translates to: YSNPQCNSYLLSIRCSLMSSFQD*GIWWWM
Trigger: CATCCACCACCAGATCCCCCAATCCTGGAAGGAGCT...CATTAATGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp GTAGTACTAGTCTCTACTTGGGGACAAGAAAATAGAATATGCAACTCAGAAAGGTTGGCTTGCAGAGTCTaGGAGATCATCAGCCGAGAT +
Preference number: 4 (lower is better)
Translates to: VVLVSTWGQENRICNSERLACRV*EIISRD
Trigger: ATCTCGGCTGATGATCTCCCAGACTCTGCAAGCCAA...CCTTTCTGAGTTGCATATTCTATTTTCTTGTCCCCAAGTAGAGACTAGTACTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp TATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCATTAATGCCAGGTGAGCCTGTGTaGTCTGTAGTCCTTGTCGAC +
Preference number: 4 (lower is better)
Translates to: YSNPQCNSYLLSIRCSLMPGEPV*SVVLVD
Trigger: GTCGACAAGGACTACAGACCACACAGGCTCACCTGG...CATTAATGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp TCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCTGATTTCGAAGATAAACCTCTaGTATCTGAAGAGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: SSAFKAADAPSQRSVCLISKINL*YLKSSV
Trigger: CACAGAGCTCTTCAGATACCAGAGGTTTATCTTCGA...AATCAGACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp AAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTTTGTGCAGATGGCCATaGTGCTTCTCGAAGATAAAC +
Preference number: 4 (lower is better)
Translates to: KQSSAFKAADAPSQRSVCLCRWP*CFSKIN
Trigger: GTTTATCTTCGAGAAGCACCATGGCCATCTGCACAA...ACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp TCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCTGATTAGACAGCAAACAGGGTaGATTTGCCTTTATCAACAC +
Preference number: 4 (lower is better)
Translates to: SSAFKAADAPSQRSVCLIRQQTG*ICLYQH
Trigger: GTGTTGATAAAGGCAAATCCACCCTGTTTGCTGTCT...AATCAGACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp TGCTTAACATTTACTGAATCAAAGGCTGAAGTAAATGGACTCTCATCTAGGTCTGGTGGGCCTTGGTCTTaGTCACTTTCGGTCATCGAT +
Preference number: 4 (lower is better)
Translates to: CLTFTESKAEVNGLSSRSGGPWS*SLSVID
Trigger: ATCGATGACCGAAAGTGACCAAGACCAAGGCCCACC...AGACCTAGATGAGAGTCCATTTACTTCAGCCTTTGATTCAGTAAATGTTAAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR CCA 90 bp TATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCATTAATGTGCCTTGGTGGGCCTTaGTCTTGGTCACTTTCGGTC +
Preference number: 4 (lower is better)
Translates to: YSNPQCNSYLLSIRCSLMCLGGP*SWSLSV
Trigger: GACCGAAAGTGACCAAGACCAAGGCCCACCAAGGCA...CATTAATGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp TATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCATTAATGAGTCTGCTGCCTTGGTaGGCCTTGGTCTTGGTCACT +
Preference number: 4 (lower is better)
Translates to: YSNPQCNSYLLSIRCSLMSLLPW*ALVLVT
Trigger: AGTGACCAAGACCAAGGCCCACCAAGGCAGCAGACT...CATTAATGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp TATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCATTAATGAACAGTCTGCTGCCTTaGTGGGCCTTGGTCTTGGTC +
Preference number: 4 (lower is better)
Translates to: YSNPQCNSYLLSIRCSLMNSLLP*WALVLV
Trigger: GACCAAGACCAAGGCCCACCAAGGCAGCAGACTGTT...CATTAATGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp ACACACGAAGTGAAACCAGACAGTGATGGCCCATGTACAAGACTTGTGCTTGAAAAGGGAATCCAAGAATaGAGGTCTAGACATTTCCTA +
Preference number: 4 (lower is better)
Translates to: THEVKPDSDGPCTRLVLEKGIQE*RSRHFL
Trigger: TAGGAAATGTCTAGACCTCCATTCTTGGATTCCCTT...TTCAAGCACAAGTCTTGTACATGGGCCATCACTGTCTGGTTTCACTTCGTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR CCA 90 bp ATCATACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATTTTGGTGTGCCTCCATaGCCAATTTTTCAGGCACCA +
Preference number: 4 (lower is better)
Translates to: IIQNNLQPSKQLMHLLRDFGVPP*PIFQAP
Trigger: TGGTGCCTGAAAAATTGGCCATGGAGGCACACCAAA...ATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGTATGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR CCA 90 bp TCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCTGATTCCCTTAAAAGATGCCTaGAAATGCTCCCAACAACAA +
Preference number: 4 (lower is better)
Translates to: SSAFKAADAPSQRSVCLIPLKDA*KCSQQQ
Trigger: TTGTTGTTGGGAGCATTTCCAGGCATCTTTTAAGGG...AATCAGACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR CCA 90 bp AAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCAGAAATCACACAGCTaGCCTCGTGATGTATTTACG +
Preference number: 4 (lower is better)
Translates to: KQSSAFKAADAPSQRSVCQKSHS*PRDVFT
Trigger: CGTAAATACATCACGAGGCCAGCTGTGTGATTTCTG...ACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR CCA 90 bp GATGCACCTTCTCAGAGATCTGTTTGTCTGATTAACAGTCTGCTGCCTTGGTGGTCCACAGTGTTAACATaGAATAGACTTAGCAACCAT +
Preference number: 4 (lower is better)
Translates to: DAPSQRSVCLINSLLPWWSTVLT*NRLSNH
Trigger: ATGGTTGCTAAGTCTATTCCATGTTAACACTGTGGA...CCACCAAGGCAGCAGACTGTTAATCAGACAAACAGATCTCTGAGAAGGTGCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR CCA 90 bp CACCACTATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCAAGTACTGGAAGGCAGTaGAGGAAGAAACATTTGGGG +
Preference number: 4 (lower is better)
Translates to: HHYSNPQCNSYLLSIRCSSTGRQ*RKKHLG
Trigger: CCCCAAATGTTTCTTCCTCCACTGCCTTCCAGTACT...TGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATAGTGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
3UTR CAA 72 bp CCTGCTCCAAGATCTTCTCCTGATACCACTACCATTTaGGCTAAGTTAGGTGTCACCATAACCCTCATATTT +
Preference number: 4 (lower is better)
Translates to: PAPRSSPDTTTI*AKLGVTITLIF
Trigger: AAATATGAGGGTTATGGTGACACCTAACTTAGCCAAAATGGTAGTGGTATCAGGAGAAGATCTTGGAGCAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394084.5
CDS-3UTR TCA 90 bp AAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCATGTAAAGTGGCTGTaGGGAAAAGTTTGGCAGAAA +
Preference number: 4 (lower is better)
Translates to: KQSSAFKAADAPSQRSVCHVKWL*GKVWQK
Trigger: TTTCTGCCAAACTTTTCCTCACAGCCACTTTACATG...ACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp CCCAAAATCAGAGCTGCACTCAGATCTCAGGTCTTCAATCTTATTGGGAATATCCATGTAAAGTGGCTGTaGGGAAAAGTTTGGCAGAAA +
Preference number: 4 (lower is better)
Translates to: PKIRAALRSQVFNLIGNIHVKWL*GKVWQK
Trigger: TTTCTGCCAAACTTTTCCTCACAGCCACTTTACATG...GATATTCCCAATAAGATTGAAGACCTGAGATCTGAGTGCAGCTCTGATTTTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR TCA 90 bp ATCATACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATGGATCTGTTTCCAGGTaGTCTTCATCTTCAACAAGC +
Preference number: 4 (lower is better)
Translates to: IIQNNLQPSKQLMHLLRDGSVSR*SSSSTS
Trigger: GCTTGTTGAAGATGAAGATCACCTGGAAACAGATCC...ATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGTATGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp CACCACTATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCAAAGAGTTTTTCCTGCTaGGATGGAGAGAACCTCTCA +
Preference number: 4 (lower is better)
Translates to: HHYSNPQCNSYLLSIRCSKSFSC*DGENLS
Trigger: TGAGAGGTTCTCTCCATCTCAGCAGGAAAAACTCTT...TGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATAGTGGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp ATCATACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATAAGAGTTTTTCCTGCTaGGATGGAGAGAACCTCTCA +
Preference number: 4 (lower is better)
Translates to: IIQNNLQPSKQLMHLLRDKSFSC*DGENLS
Trigger: TGAGAGGTTCTCTCCATCTCAGCAGGAAAAACTCTT...ATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGTATGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp GCCCAAAGACGAGAGAACCTGCTTGTTAGCTCATTAACCTGTTTAGTAAAGATCAGGGTTTTGTACATCTaGGACACGATCCACCTTAAA +
Preference number: 4 (lower is better)
Translates to: AQRRENLLVSSLTCLVKIRVLYI*DTIHLK
Trigger: TTTAAGGTGGATCGTGTCTCAGATGTACAAAACCCT...GATCTTTACTAAACAGGTTAATGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp ACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTAGGGTTTTGTACATCTaGGACACGATCCACCTTAAA +
Preference number: 4 (lower is better)
Translates to: TKQSSAFKAADAPSQRSVRVLYI*DTIHLK
Trigger: TTTAAGGTGGATCGTGTCTCAGATGTACAAAACCCT...AACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp TGCTTAACATTTACTGAATCAAAGGCTGAAGTAAATGGACTCTCATCTAGGTCTATCCTTCCAGAAGATTaGCGGAAGACAATGGAGGGG +
Preference number: 4 (lower is better)
Translates to: CLTFTESKAEVNGLSSRSILPED*RKTMEG
Trigger: CCCCTCCATTGTCTTCCGTCAATCTTCTGGAAGGAT...AGACCTAGATGAGAGTCCATTTACTTCAGCCTTTGATTCAGTAAATGTTAAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR TCA 90 bp ATCATACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTATCTTCTCTCAGTTaGTCTCCAGACATCACACTC +
Preference number: 4 (lower is better)
Translates to: IIQNNLQPSKQLMHLLRDLSSLS*SPDITL
Trigger: GAGTGTGATGTCTGGAGATCAACTGAGAGAAGATAG...ATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGTATGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp CAAGGTCTGTTCCTGTCTGATTTCTCATCATCGCTATCTTTGCGTTCTTCAGTCAATGGTTTCTTGAGATaGTCCTTCATGGTCCATATG +
Preference number: 4 (lower is better)
Translates to: QGLFLSDFSSSLSLRSSVNGFLR*SFMVHM
Trigger: CATATGGACCATGAAGGATCATCTCAAGAAACCATT...GACTGAAGAACGCAAAGATAGCGATGATGAGAAATCAGACAGGAACAGACCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR TCA 90 bp CACCACTATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCACTGTACCTAAGGAAATaGCCAACACCTCTTCTGGTT +
Preference number: 4 (lower is better)
Translates to: HHYSNPQCNSYLLSIRCSLYLRK*PTPLLV
Trigger: AACCAGAAGAGGTGTTGGTCATTTCCTTAGGTACAG...TGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATAGTGGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp ATCATACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTACCTAAGGAAATaGCCAACACCTCTTCTGGTT +
Preference number: 4 (lower is better)
Translates to: IIQNNLQPSKQLMHLLRDLYLRK*PTPLLV
Trigger: AACCAGAAGAGGTGTTGGTCATTTCCTTAGGTACAG...ATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGTATGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp AAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCTCACTCACTGTTTCTaGTATGTCCCTATCATCTGT +
Preference number: 4 (lower is better)
Translates to: KQSSAFKAADAPSQRSVCLTHCF*YVPIIC
Trigger: ACAGATGATAGGGACATATCAGAAACAGTGAGTGAG...ACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp ACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTCTCACTCACTGTTTCTaGTATGTCCCTATCATCTGT +
Preference number: 4 (lower is better)
Translates to: TKQSSAFKAADAPSQRSVLTHCF*YVPIIC
Trigger: ACAGATGATAGGGACATATCAGAAACAGTGAGTGAG...AACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp ATCATACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATAAGAATGCCTTTGCTTaGATGCCTCCATTTCAGCTG +
Preference number: 4 (lower is better)
Translates to: IIQNNLQPSKQLMHLLRDKNAFA*MPPFQL
Trigger: CAGCTGAAATGGAGGCATTCAAGCAAAGGCATTCTT...ATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGTATGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp ATCATACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATGATGAAGATGATGAATaGGGTGCAGCCACCAAAGAA +
Preference number: 4 (lower is better)
Translates to: IIQNNLQPSKQLMHLLRDDEDDE*GAATKE
Trigger: TTCTTTGGTGGCTGCACCTCATTCATCATCTTCATC...ATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGTATGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp GCCCAAAGACGAGAGAACCTGCTTGTTAGCTCATTAACCTGTTTAGTAAAGATCAGCTTTAGGCATGGCTaGAACAAAACGTTTTCTCCA +
Preference number: 4 (lower is better)
Translates to: AQRRENLLVSSLTCLVKISFRHG*NKTFSP
Trigger: TGGAGAAAACGTTTTGTTTCAGCCATGCCTAAAGCT...GATCTTTACTAAACAGGTTAATGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000495955.5
CDS-3UTR TCA 90 bp GTAGTACTAGTCTCTACTTGGGGACAAGAAAATAGAATATGCAACTCAGAAAGGATAAGCGTTCCTGCTTaGGGTGATGAGCCAGAGTAT +
Preference number: 4 (lower is better)
Translates to: VVLVSTWGQENRICNSERISVPA*GDEPEY
Trigger: ATACTCTGGCTCATCACCTCAAGCAGGAACGCTTAT...CCTTTCTGAGTTGCATATTCTATTTTCTTGTCCCCAAGTAGAGACTAGTACTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp CACCACTATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCACTTGTCGACAACGAGTaGGATAAGCAATATATGGGG +
Preference number: 4 (lower is better)
Translates to: HHYSNPQCNSYLLSIRCSLVDNE*DKQYMG
Trigger: CCCCATATATTGCTTATCTCACTCGTTGTCGACAAG...TGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATAGTGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp CACCACTATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCATATCGTCAGCTGCGGTaGGTTTCTGAAAGTCTTGAA +
Preference number: 4 (lower is better)
Translates to: HHYSNPQCNSYLLSIRCSYRQLR*VSESLE
Trigger: TTCAAGACTTTCAGAAACTCACCGCAGCTGACGATA...TGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATAGTGGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp TATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCATTAATGTCGCGTTTTGCCATATaGCATCCTGGGCCATTGCAC +
Preference number: 4 (lower is better)
Translates to: YSNPQCNSYLLSIRCSLMSRFAI*HPGPLH
Trigger: GTGCAATGGCCCAGGATGTCATATGGCAAAACGCGA...CATTAATGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp GTAGTACTAGTCTCTACTTGGGGACAAGAAAATAGAATATGCAACTCAGAAAGGCTCTGGATATGTTCATaGAGAACCTGGTCGCGAAGT +
Preference number: 4 (lower is better)
Translates to: VVLVSTWGQENRICNSERLWICS*RTWSRS
Trigger: ACTTCGCGACCAGGTTCTTCATGAACATATCCAGAG...CCTTTCTGAGTTGCATATTCTATTTTCTTGTCCCCAAGTAGAGACTAGTACTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp GTAGTACTAGTCTCTACTTGGGGACAAGAAAATAGAATATGCAACTCAGAAAGGATTCTACTGCTGCTGTaGACTGCATCCACCAATAGG +
Preference number: 4 (lower is better)
Translates to: VVLVSTWGQENRICNSERILLLL*TASTNR
Trigger: CCTATTGGTGGATGCAGTTCACAGCAGCAGTAGAAT...CCTTTCTGAGTTGCATATTCTATTTTCTTGTCCCCAAGTAGAGACTAGTACTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp GCCCAAAGACGAGAGAACCTGCTTGTTAGCTCATTAACCTGTTTAGTAAAGATCAGAGATCTGTTTGTCTaGTTAACAGTCTGCTGCCTT +
Preference number: 4 (lower is better)
Translates to: AQRRENLLVSSLTCLVKIRDLFV*LTVCCL
Trigger: AAGGCAGCAGACTGTTAATCAGACAAACAGATCTCT...GATCTTTACTAAACAGGTTAATGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp TGCTTAACATTTACTGAATCAAAGGCTGAAGTAAATGGACTCTCATCTAGGTCTAGCCTTCAAAGCAGCTaGTGCACCTTCTCAGAGATC +
Preference number: 4 (lower is better)
Translates to: CLTFTESKAEVNGLSSRSSLQSS*CTFSEI
Trigger: GATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCT...AGACCTAGATGAGAGTCCATTTACTTCAGCCTTTGATTCAGTAAATGTTAAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR TCA 90 bp ATGCAACTCAGAAAGGAAAGAGCCCAAAGACGAGAGAACCTGCTTGTTAGCTCAGAATGTTTCCTGGGCTaGTTTTGTACTTTTACACTA +
Preference number: 4 (lower is better)
Translates to: MQLRKERAQRRENLLVSSECFLG*FCTFTL
Trigger: TAGTGTAAAAGTACAAAATCAGCCCAGGAAACATTC...TGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGCTCTTTCCTTTCTGAGTTGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR TCA 90 bp GTAGTACTAGTCTCTACTTGGGGACAAGAAAATAGAATATGCAACTCAGAAAGGGTAACTAGTGGCTGCTaGATGTTTCCTGGGCTGATT +
Preference number: 4 (lower is better)
Translates to: VVLVSTWGQENRICNSERVTSGC*MFPGLI
Trigger: AATCAGCCCAGGAAACATTCAGCAGCCACTAGTTAC...CCTTTCTGAGTTGCATATTCTATTTTCTTGTCCCCAAGTAGAGACTAGTACTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR TCA 90 bp TGCTTAACATTTACTGAATCAAAGGCTGAAGTAAATGGACTCTCATCTAGGTCTCTAGGAAGCACCAATTaGGGAAGTGAACCCCACTAC +
Preference number: 4 (lower is better)
Translates to: CLTFTESKAEVNGLSSRSLGSTN*GSEPHY
Trigger: GTAGTGGGGTTCACTTCCTCAATTGGTGCTTCCTAG...AGACCTAGATGAGAGTCCATTTACTTCAGCCTTTGATTCAGTAAATGTTAAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR TCA 90 bp AAGCTCTGCCTTAGCATTCATCTGAGTGGAACCACTTTCTACACCCTCAAAGTACATGACTTCCATTTATaGAACCACTATCACTTCCTG +
Preference number: 4 (lower is better)
Translates to: KLCLSIHLSGTTFYTLKVHDFHL*NHYHFL
Trigger: CAGGAAGTGATAGTGGTTTCATAAATGGAAGTCATG...TACTTTGAGGGTGTAGAAAGTGGTTCCACTCAGATGAATGCTAAGGCAGAGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497580.5
CDS-3UTR GCA 90 bp CCTCCATTTCAGCTGGAGTTAAAACATGGGAACCAAAGTTTGGCAACCTGGCCTTCTTCAACAAGCAGTTaGATAATTGGCTCATGTAAA +
Preference number: 4 (lower is better)
Translates to: PPFQLELKHGNQSLATWPSSTSS*IIGSCK
Trigger: TTTACATGAGCCAATTATGCAACTGCTTGTTGAAGA...AGGCCAGGTTGCCAAACTTTGGTTCCCATGTTTTAACTCCAGCTGAAATGGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR GCA 90 bp ACAATAAGACAAAGACTTGAAGAGTATGATGCCACACTCCTGTTGATACAATTCGAGATCAGTACACATTaGCCTGACCTCCCCAACTTC +
Preference number: 4 (lower is better)
Translates to: TIRQRLEEYDATLLLIQFEISTH*PDLPNF
Trigger: GAAGTTGGGGAGGTCAGGGCAATGTGTACTGATCTC...GAATTGTATCAACAGGAGTGTGGCATCATACTCTTCAAGTCTTTGTCTTATTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394084.5
CDS-3UTR GCA 90 bp ATCATACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATTTCTGGATTGACAACTaGAGGACAAATGAAGCAGGC +
Preference number: 4 (lower is better)
Translates to: IIQNNLQPSKQLMHLLRDFWIDN*RTNEAG
Trigger: GCCTGCTTCATTTGTCCTGCAGTTGTCAATCCAGAA...ATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGTATGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp GCTTTGGTGTGCCTCCATGGCCAATTTTTCAGGCACCAAAACCCATTCCTGATTCATCAGATTAAATCGTaGTACTTCATTAATAGGAGC +
Preference number: 4 (lower is better)
Translates to: ALVCLHGQFFRHQNPFLIHQIKS*YFINRS
Trigger: GCTCCTATTAATGAAGTAGCACGATTTAATCTGATG...AATCAGGAATGGGTTTTGGTGCCTGAAAAATTGGCCATGGAGGCACACCAAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR GCA 90 bp GATGCACCTTCTCAGAGATCTGTTTGTCTGATTAACAGTCTGCTGCCTTGGTGGCATCAGATTAAATCGTaGTACTTCATTAATAGGAGC +
Preference number: 4 (lower is better)
Translates to: DAPSQRSVCLINSLLPWWHQIKS*YFINRS
Trigger: GCTCCTATTAATGAAGTAGCACGATTTAATCTGATG...CCACCAAGGCAGCAGACTGTTAATCAGACAAACAGATCTCTGAGAAGGTGCATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp TATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCATTAATGCCAGTCATTGCTAACTaGTGCAAAAGGCGGCCTACC +
Preference number: 4 (lower is better)
Translates to: YSNPQCNSYLLSIRCSLMPVIAN*CKRRPT
Trigger: GGTAGGCCGCCTTTTGCAGCAGTTAGCAATGACTGG...CATTAATGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp ACACACGAAGTGAAACCAGACAGTGATGGCCCATGTACAAGACTTGTGCTTGAATATAAACCACAGTTCTaGTCAATCCTTCCAGAAGAT +
Preference number: 4 (lower is better)
Translates to: THEVKPDSDGPCTRLVLEYKPQF*SILPED
Trigger: ATCTTCTGGAAGGATTGAGCAGAACTGTGGTTTATA...TTCAAGCACAAGTCTTGTACATGGGCCATCACTGTCTGGTTTCACTTCGTGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR GCA 90 bp AAGCTCTGCCTTAGCATTCATCTGAGTGGAACCACTTTCTACACCCTCAAAGTAGAGTCATTTCTAAACTaGTACTTTTTCCTGGCTTGG +
Preference number: 4 (lower is better)
Translates to: KLCLSIHLSGTTFYTLKVESFLN*YFFLAW
Trigger: CCAAGCCAGGAAAAAGTAGCAGTTTAGAAATGACTC...TACTTTGAGGGTGTAGAAAGTGGTTCCACTCAGATGAATGCTAAGGCAGAGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497580.5
CDS-3UTR GCA 90 bp TCACCTGCTCCAAGATCTTCTCCTGATACCACTACCATTTTGGCTAAGTTAGGTTCGATTCTTTTTATTTaGTGGAGTGGTTGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: SPAPRSSPDTTTILAKLGSILFI*WSGCWR
Trigger: TCTCCAGCAACCACTCCAGCAAATAAAAAGAATCGA...ACCTAACTTAGCCAAAATGGTAGTGGTATCAGGAGAAGATCTTGGAGCAGGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394084.5
CDS-3UTR GCA 90 bp TGCTTAACATTTACTGAATCAAAGGCTGAAGTAAATGGACTCTCATCTAGGTCTCCATTAGCATATTGGTaGGGCTTCTGCTCCGAGTTG +
Preference number: 4 (lower is better)
Translates to: CLTFTESKAEVNGLSSRSPLAYW*GFCSEL
Trigger: CAACTCGGAGCAGAAGCCGCACCAATATGCTAATGG...AGACCTAGATGAGAGTCCATTTACTTCAGCCTTTGATTCAGTAAATGTTAAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR GCA 90 bp GTAGTACTAGTCTCTACTTGGGGACAAGAAAATAGAATATGCAACTCAGAAAGGCTTCCAGATTATCACTaGAGAGGGAAAAGCGCAAGG +
Preference number: 4 (lower is better)
Translates to: VVLVSTWGQENRICNSERLPDYH*RGKSAR
Trigger: CCTTGCGCTTTTCCCTCTGCAGTGATAATCTGGAAG...CCTTTCTGAGTTGCATATTCTATTTTCTTGTCCCCAAGTAGAGACTAGTACTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp GTAGTACTAGTCTCTACTTGGGGACAAGAAAATAGAATATGCAACTCAGAAAGGCTTCAACTCCATTACTaGCAGAAGGTCCTGCTCCAA +
Preference number: 4 (lower is better)
Translates to: VVLVSTWGQENRICNSERLQLHY*QKVLLQ
Trigger: TTGGAGCAGGACCTTCTGGCAGTAATGGAGTTGAAG...CCTTTCTGAGTTGCATATTCTATTTTCTTGTCCCCAAGTAGAGACTAGTACTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp TCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCTGATTGCACCTGCAATTTCTTaGAAGCGATCTTCATCAATA +
Preference number: 4 (lower is better)
Translates to: SSAFKAADAPSQRSVCLIAPAIS*KRSSSI
Trigger: TATTGATGAAGATCGCTTGCAAGAAATTGCAGGTGC...AATCAGACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp ACCAAGGTCTGTTCCTGTCTGATTTCTCATCATCGCTATCTTTGCGTTCTTCAGGCACCTGCAATTTCTTaGAAGCGATCTTCATCAATA +
Preference number: 4 (lower is better)
Translates to: TKVCSCLISHHRYLCVLQAPAIS*KRSSSI
Trigger: TATTGATGAAGATCGCTTGCAAGAAATTGCAGGTGC...CTGAAGAACGCAAAGATAGCGATGATGAGAAATCAGACAGGAACAGACCTTGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR GCA 90 bp CACCACTATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCAAATATCCTCAGAGGTTaGACTTATGCCGGACACAAC +
Preference number: 4 (lower is better)
Translates to: HHYSNPQCNSYLLSIRCSNILRG*TYAGHN
Trigger: GTTGTGTCCGGCATAAGTGCAACCTCTGAGGATATT...TGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATAGTGGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp GTAGTACTAGTCTCTACTTGGGGACAAGAAAATAGAATATGCAACTCAGAAAGGCCCCAAAATCAGAGCTaGACTCAGATCTCAGGTCTT +
Preference number: 4 (lower is better)
Translates to: VVLVSTWGQENRICNSERPQNQS*TQISGL
Trigger: AAGACCTGAGATCTGAGTGCAGCTCTGATTTTGGGG...CCTTTCTGAGTTGCATATTCTATTTTCTTGTCCCCAAGTAGAGACTAGTACTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp ATCATACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATATGCCTTTGCTTGAATaGCTCCATTTCAGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: IIQNNLQPSKQLMHLLRDMPLLE*LHFSWS
Trigger: ACTCCAGCTGAAATGGAGGCATTCAAGCAAAGGCAT...ATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGTATGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp ATCATACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCATCATCGCTATCTTTaGGTTCTTCAGTCTCTCCTC +
Preference number: 4 (lower is better)
Translates to: IIQNNLQPSKQLMHLLRDHHRYL*VLQSLL
Trigger: GAGGAGAGACTGAAGAACGCAAAGATAGCGATGATG...ATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGTATGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp TCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCTGATTTTGCTTCGCAATCCATaGTGTACGATACAACTTTTC +
Preference number: 4 (lower is better)
Translates to: SSAFKAADAPSQRSVCLILLRNP*CTIQLF
Trigger: GAAAAGTTGTATCGTACAGCATGGATTGCGAAGCAA...AATCAGACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp ATGCAACTCAGAAAGGAAAGAGCCCAAAGACGAGAGAACCTGCTTGTTAGCTCAAAATTGATTCTCTGTTaGTTCGCAATCCATGCTGTA +
Preference number: 4 (lower is better)
Translates to: MQLRKERAQRRENLLVSSKLILC*FAIHAV
Trigger: TACAGCATGGATTGCGAAGCAACAGAGAATCAATTT...TGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGCTCTTTCCTTTCTGAGTTGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp TATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCATTAATGCAGCTCTCCAGTTCTTaGAGACGCTCCTCCTGCTTT +
Preference number: 4 (lower is better)
Translates to: YSNPQCNSYLLSIRCSLMQLSSS*RRSSCF
Trigger: AAAGCAGGAGGAGCGTCTGCAAGAACTGGAGAGCTG...CATTAATGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp GTAGTACTAGTCTCTACTTGGGGACAAGAAAATAGAATATGCAACTCAGAAAGGTTCATAGTTTGCCATTaGTCCATCACTGGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: VVLVSTWGQENRICNSERFIVCH*SITGAG
Trigger: ACCAGCCCCAGTGATGGAGCAATGGCAAACTATGAA...CCTTTCTGAGTTGCATATTCTATTTTCTTGTCCCCAAGTAGAGACTAGTACTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp AAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTAGTTTTATCGTCAGCTaGGGTGAGTTTCTGAAAGTC +
Preference number: 4 (lower is better)
Translates to: KQSSAFKAADAPSQRSVCSFIVS*GEFLKV
Trigger: GACTTTCAGAAACTCACCGCAGCTGACGATAAAACT...ACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp GTAGTACTAGTCTCTACTTGGGGACAAGAAAATAGAATATGCAACTCAGAAAGGCTCAATGGCCAGCTGTaGATCTTGAAGCTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: VVLVSTWGQENRICNSERLNGQL*ILKLFF
Trigger: GAAGAACAGCTTCAAGATGCACAGCTGGCCATTGAG...CCTTTCTGAGTTGCATATTCTATTTTCTTGTCCCCAAGTAGAGACTAGTACTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp GTAGTACTAGTCTCTACTTGGGGACAAGAAAATAGAATATGCAACTCAGAAAGGTGCAGATGGCCATGGTaGTTCTCGAAGATAAACCTC +
Preference number: 4 (lower is better)
Translates to: VVLVSTWGQENRICNSERCRWPW*FSKINL
Trigger: GAGGTTTATCTTCGAGAAGCACCATGGCCATCTGCA...CCTTTCTGAGTTGCATATTCTATTTTCTTGTCCCCAAGTAGAGACTAGTACTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp TCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCTGATTAAGCTACTGATATACTaGACAGTAGACAGCAAACAG +
Preference number: 4 (lower is better)
Translates to: SSAFKAADAPSQRSVCLIKLLIY*TVDSKQ
Trigger: CTGTTTGCTGTCTACTGTGCAGTATATCAGTAGCTT...AATCAGACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp AAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTAATGAATTCTACTGCTaGTGTGAACTGCATCCACCA +
Preference number: 4 (lower is better)
Translates to: KQSSAFKAADAPSQRSVCNEFYC*CELHPP
Trigger: TGGTGGATGCAGTTCACAGCAGCAGTAGAATTCATT...ACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp TCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCTGATTAGATCTGCTTTAAAATaGCTGATGCTGTGCAGTATC +
Preference number: 4 (lower is better)
Translates to: SSAFKAADAPSQRSVCLIRSALK*LMLCSI
Trigger: GATACTGCACAGCATCAGGCATTTTAAAGCAGATCT...AATCAGACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp ATCATACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATAAAGATGCCTGGAAATaGTCCCAACAACAAGGGACT +
Preference number: 4 (lower is better)
Translates to: IIQNNLQPSKQLMHLLRDKDAWK*SQQQGT
Trigger: AGTCCCTTGTTGTTGGGAGCATTTCCAGGCATCTTT...ATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGTATGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR GCA 90 bp ACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTAGTTCCCTTAAAAGATaGCTGGAAATGCTCCCAACA +
Preference number: 4 (lower is better)
Translates to: TKQSSAFKAADAPSQRSVSSLKR*LEMLPT
Trigger: TGTTGGGAGCATTTCCAGGCATCTTTTAAGGGAACT...AACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR GCA 90 bp GATGCACCTTCTCAGAGATCTGTTTGTCTGATTAACAGTCTGCTGCCTTGGTGGCATCCCACACTCCTATaGAATTTGTTATTTTGGTAT +
Preference number: 4 (lower is better)
Translates to: DAPSQRSVCLINSLLPWWHPTLL*NLLFWY
Trigger: ATACCAAAATAACAAATTGCATAGGAGTGTGGGATG...CCACCAAGGCAGCAGACTGTTAATCAGACAAACAGATCTCTGAGAAGGTGCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR GCA 90 bp ACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTAGAAAAGAGCCCCGATaGAATGTCCACATCTTCATA +
Preference number: 4 (lower is better)
Translates to: TKQSSAFKAADAPSQRSVRKEPR*NVHIFI
Trigger: TATGAAGATGTGGACATTGCATCGGGGCTCTTTTCT...AACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR GCA 90 bp ACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTACCATGCAGCACATTTaGAATCCCTTAGAAAACCTG +
Preference number: 4 (lower is better)
Translates to: TKQSSAFKAADAPSQRSVTMQHI*NPLENL
Trigger: CAGGTTTTCTAAGGGATTGCAAATGTGCTGCATGGT...AACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR GCA 90 bp ACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTCCCTGTGAATCAAACTaGTCTCCCCTTTTAATCAGT +
Preference number: 4 (lower is better)
Translates to: TKQSSAFKAADAPSQRSVPCESN*SPLLIS
Trigger: ACTGATTAAAAGGGGAGAGCAGTTTGATTCACAGGG...AACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR CCA 90 bp TATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCATTAATGATTGACGGAAGACAATaGAGGGGTCTCCACTGCACG +
Preference number: 4 (lower is better)
Translates to: YSNPQCNSYLLSIRCSLMIDGRQ*RGLHCT
Trigger: CGTGCAGTGGAGACCCCTCCATTGTCTTCCGTCAAT...CATTAATGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp TATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCATTAATGTACTTTTTCCTGGCTTaGCCGGGGGTAGGTTTGCCA +
Preference number: 4 (lower is better)
Translates to: YSNPQCNSYLLSIRCSLMYFFLA*PGVGLP
Trigger: TGGCAAACCTACCCCCGGCCAAGCCAGGAAAAAGTA...CATTAATGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp TATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCATTAATGGGTCCATTAGCATATTaGTGCGGCTTCTGCTCCGAG +
Preference number: 4 (lower is better)
Translates to: YSNPQCNSYLLSIRCSLMGPLAY*CGFCSE
Trigger: CTCGGAGCAGAAGCCGCACCAATATGCTAATGGACC...CATTAATGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp TCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCTGATTGGTCTTCAATCTTATTaGGAATATCCTCAGAGGTTG +
Preference number: 4 (lower is better)
Translates to: SSAFKAADAPSQRSVCLIGLQSY*EYPQRL
Trigger: CAACCTCTGAGGATATTCCCAATAAGATTGAAGACC...AATCAGACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp GATGCACCTTCTCAGAGATCTGTTTGTCTGATTAACAGTCTGCTGCCTTGGTGGTATTTCATCCATGTCTaGACTAGTGACAGAATCTTT +
Preference number: 4 (lower is better)
Translates to: DAPSQRSVCLINSLLPWWYFIHV*TSDRIF
Trigger: AAAGATTCTGTCACTAGTCCAGACATGGATGAAATA...CCACCAAGGCAGCAGACTGTTAATCAGACAAACAGATCTCTGAGAAGGTGCATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp CCCAAAATCAGAGCTGCACTCAGATCTCAGGTCTTCAATCTTATTGGGAATATCGCTGGAGTTAAAACATaGGAACCAAAGTTTGGCAAC +
Preference number: 4 (lower is better)
Translates to: PKIRAALRSQVFNLIGNIAGVKT*EPKFGN
Trigger: GTTGCCAAACTTTGGTTCCCATGTTTTAACTCCAGC...GATATTCCCAATAAGATTGAAGACCTGAGATCTGAGTGCAGCTCTGATTTTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR CCA 90 bp AAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTGCTGGAGTTAAAACATaGGAACCAAAGTTTGGCAAC +
Preference number: 4 (lower is better)
Translates to: KQSSAFKAADAPSQRSVCAGVKT*EPKFGN
Trigger: GTTGCCAAACTTTGGTTCCCATGTTTTAACTCCAGC...ACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp TATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCATTAATGAGCTGGGGTCACTCATaGGTCTCCGGACAGAAGATA +
Preference number: 4 (lower is better)
Translates to: YSNPQCNSYLLSIRCSLMSWGHS*VSGQKI
Trigger: TATCTTCTGTCCGGAGACCCATGAGTGACCCCAGCT...CATTAATGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp CACCACTATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCATCTTCTGGGTCTGTGTaGTCTGGTAAACCATTCCTT +
Preference number: 4 (lower is better)
Translates to: HHYSNPQCNSYLLSIRCSSSGSV*SGKPFL
Trigger: AAGGAATGGTTTACCAGACCACACAGACCCAGAAGA...TGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATAGTGGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp ATCATACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATTCTTCTGGGTCTGTGTaGTCTGGTAAACCATTCCTT +
Preference number: 4 (lower is better)
Translates to: IIQNNLQPSKQLMHLLRDSSGSV*SGKPFL
Trigger: AAGGAATGGTTTACCAGACCACACAGACCCAGAAGA...ATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGTATGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp ATGCAACTCAGAAAGGAAAGAGCCCAAAGACGAGAGAACCTGCTTGTTAGCTCAGAGATAAGCAATATATaGGGCTCTTTTTCTGTAGTC +
Preference number: 4 (lower is better)
Translates to: MQLRKERAQRRENLLVSSEISNI*GSFSVV
Trigger: GACTACAGAAAAAGAGCCCCATATATTGCTTATCTC...TGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGCTCTTTCCTTTCTGAGTTGCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp GCCCAAAGACGAGAGAACCTGCTTGTTAGCTCATTAACCTGTTTAGTAAAGATCTCGAAGATAAACCTCTaGTATCTGAAGAGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: AQRRENLLVSSLTCLVKISKINL*YLKSSV
Trigger: CACAGAGCTCTTCAGATACCAGAGGTTTATCTTCGA...GATCTTTACTAAACAGGTTAATGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp ATCATACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATTTGTGCAGATGGCCATaGTGCTTCTCGAAGATAAAC +
Preference number: 4 (lower is better)
Translates to: IIQNNLQPSKQLMHLLRDLCRWP*CFSKIN
Trigger: GTTTATCTTCGAGAAGCACCATGGCCATCTGCACAA...ATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGTATGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp GCCCAAAGACGAGAGAACCTGCTTGTTAGCTCATTAACCTGTTTAGTAAAGATCAGACAGCAAACAGGGTaGATTTGCCTTTATCAACAC +
Preference number: 4 (lower is better)
Translates to: AQRRENLLVSSLTCLVKIRQQTG*ICLYQH
Trigger: GTGTTGATAAAGGCAAATCCACCCTGTTTGCTGTCT...GATCTTTACTAAACAGGTTAATGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp GATGCACCTTCTCAGAGATCTGTTTGTCTGATTAACAGTCTGCTGCCTTGGTGGGTACTAGTCTCTACTTaGGGACAAGAAAATAGAATA +
Preference number: 4 (lower is better)
Translates to: DAPSQRSVCLINSLLPWWVLVST*GQENRI
Trigger: TATTCTATTTTCTTGTCCCCAAGTAGAGACTAGTAC...CCACCAAGGCAGCAGACTGTTAATCAGACAAACAGATCTCTGAGAAGGTGCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp GCTTTGGTGTGCCTCCATGGCCAATTTTTCAGGCACCAAAACCCATTCCTGATTGTACTAGTCTCTACTTaGGGACAAGAAAATAGAATA +
Preference number: 4 (lower is better)
Translates to: ALVCLHGQFFRHQNPFLIVLVST*GQENRI
Trigger: TATTCTATTTTCTTGTCCCCAAGTAGAGACTAGTAC...AATCAGGAATGGGTTTTGGTGCCTGAAAAATTGGCCATGGAGGCACACCAAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR CCA 90 bp GTAGTACTAGTCTCTACTTGGGGACAAGAAAATAGAATATGCAACTCAGAAAGGTTTGGTGTGCCTCCATaGCCAATTTTTCAGGCACCA +
Preference number: 4 (lower is better)
Translates to: VVLVSTWGQENRICNSERFGVPP*PIFQAP
Trigger: TGGTGCCTGAAAAATTGGCCATGGAGGCACACCAAA...CCTTTCTGAGTTGCATATTCTATTTTCTTGTCCCCAAGTAGAGACTAGTACTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR CCA 90 bp GTAGTACTAGTCTCTACTTGGGGACAAGAAAATAGAATATGCAACTCAGAAAGGTTGTGCTTGAAGCTTTaGTGTGCCTCCATGGCCAAT +
Preference number: 4 (lower is better)
Translates to: VVLVSTWGQENRICNSERLCLKL*CASMAN
Trigger: ATTGGCCATGGAGGCACACCAAAGCTTCAAGCACAA...CCTTTCTGAGTTGCATATTCTATTTTCTTGTCCCCAAGTAGAGACTAGTACTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR CCA 90 bp GTAGTACTAGTCTCTACTTGGGGACAAGAAAATAGAATATGCAACTCAGAAAGGAGAAAATCTAGTTTCTaGCTGGGCAGGGTGGTTCAC +
Preference number: 4 (lower is better)
Translates to: VVLVSTWGQENRICNSERRKSSF*LGRVVH
Trigger: GTGAACCACCCTGCCCAGCCAGAAACTAGATTTTCT...CCTTTCTGAGTTGCATATTCTATTTTCTTGTCCCCAAGTAGAGACTAGTACTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR CCA 90 bp GGAGCTCTGTCTGGGATTTCTGCAGTATATTATTTCGGAGGAGAAGAACCACCATCCACAGTGTTAACATaGAATAGACTTAGCAACCAT +
Preference number: 4 (lower is better)
Translates to: GALSGISAVYYFGGEEPPSTVLT*NRLSNH
Trigger: ATGGTTGCTAAGTCTATTCCATGTTAACACTGTGGA...TGGTGGTTCTTCTCCTCCGAAATAATATACTGCAGAAATCCCAGACAGAGCTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR CCA 90 bp GGAGCTCTGTCTGGGATTTCTGCAGTATATTATTTCGGAGGAGAAGAACCACCACTGCTGAATGTTTCCTaGGCTGATTTTGTACTTTTA +
Preference number: 4 (lower is better)
Translates to: GALSGISAVYYFGGEEPPLLNVS*ADFVLL
Trigger: TAAAAGTACAAAATCAGCCCAGGAAACATTCAGCAG...TGGTGGTTCTTCTCCTCCGAAATAATATACTGCAGAAATCCCAGACAGAGCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR CCA 90 bp CCCAAAATCAGAGCTGCACTCAGATCTCAGGTCTTCAATCTTATTGGGAATATCGAGGAGTTGAGACATTaGCTCTCTGAAAGAGATTCT +
Preference number: 4 (lower is better)
Translates to: PKIRAALRSQVFNLIGNIEELRH*LSERDS
Trigger: AGAATCTCTTTCAGAGAGCCAATGTCTCAACTCCTC...GATATTCCCAATAAGATTGAAGACCTGAGATCTGAGTGCAGCTCTGATTTTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497580.5
CDS-3UTR TCA 90 bp GTAGTACTAGTCTCTACTTGGGGACAAGAAAATAGAATATGCAACTCAGAAAGGGGATCTGTTTCCAGGTaGTCTTCATCTTCAACAAGC +
Preference number: 4 (lower is better)
Translates to: VVLVSTWGQENRICNSERGSVSR*SSSSTS
Trigger: GCTTGTTGAAGATGAAGATCACCTGGAAACAGATCC...CCTTTCTGAGTTGCATATTCTATTTTCTTGTCCCCAAGTAGAGACTAGTACTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp GTAGTACTAGTCTCTACTTGGGGACAAGAAAATAGAATATGCAACTCAGAAAGGAAGAGTTTTTCCTGCTaGGATGGAGAGAACCTCTCA +
Preference number: 4 (lower is better)
Translates to: VVLVSTWGQENRICNSERKSFSC*DGENLS
Trigger: TGAGAGGTTCTCTCCATCTCAGCAGGAAAAACTCTT...CCTTTCTGAGTTGCATATTCTATTTTCTTGTCCCCAAGTAGAGACTAGTACTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp GCCCAAAGACGAGAGAACCTGCTTGTTAGCTCATTAACCTGTTTAGTAAAGATCAATGGTTTCTTGAGATaGTCCTTCATGGTCCATATG +
Preference number: 4 (lower is better)
Translates to: AQRRENLLVSSLTCLVKINGFLR*SFMVHM
Trigger: CATATGGACCATGAAGGATCATCTCAAGAAACCATT...GATCTTTACTAAACAGGTTAATGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp GTAGTACTAGTCTCTACTTGGGGACAAGAAAATAGAATATGCAACTCAGAAAGGAGAAGCCCCTTCATGTaGAGACAGTGGATCAAACAT +
Preference number: 4 (lower is better)
Translates to: VVLVSTWGQENRICNSERRSPFM*RQWIKH
Trigger: ATGTTTGATCCACTGTCTTCACATGAAGGGGCTTCT...CCTTTCTGAGTTGCATATTCTATTTTCTTGTCCCCAAGTAGAGACTAGTACTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp GTAGTACTAGTCTCTACTTGGGGACAAGAAAATAGAATATGCAACTCAGAAAGGAAGAATGCCTTTGCTTaGATGCCTCCATTTCAGCTG +
Preference number: 4 (lower is better)
Translates to: VVLVSTWGQENRICNSERKNAFA*MPPFQL
Trigger: CAGCTGAAATGGAGGCATTCAAGCAAAGGCATTCTT...CCTTTCTGAGTTGCATATTCTATTTTCTTGTCCCCAAGTAGAGACTAGTACTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp GTAGTACTAGTCTCTACTTGGGGACAAGAAAATAGAATATGCAACTCAGAAAGGGATGAAGATGATGAATaGGGTGCAGCCACCAAAGAA +
Preference number: 4 (lower is better)
Translates to: VVLVSTWGQENRICNSERDEDDE*GAATKE
Trigger: TTCTTTGGTGGCTGCACCTCATTCATCATCTTCATC...CCTTTCTGAGTTGCATATTCTATTTTCTTGTCCCCAAGTAGAGACTAGTACTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp TTTTTCCTCATCTTGTTTACTTTGTCTAACTCCCATTCATCACAAAGTGCAAACTCAAAGGCTGATCACTaGATGCCAGCTACTTGGGAG +
Preference number: 4 (lower is better)
Translates to: FFLILFTLSNSHSSQSANSKADH*MPATWE
Trigger: CTCCCAAGTAGCTGGCATTCAGTGATCAGCCTTTGA...GTTTGCACTTTGTGATGAATGGGAGTTAGACAAAGTAAACAAGATGAGGAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394084.5
CDS-3UTR TCA 90 bp TGCTTAACATTTACTGAATCAAAGGCTGAAGTAAATGGACTCTCATCTAGGTCTATAAGCGTTCCTGCTTaGGGTGATGAGCCAGAGTAT +
Preference number: 4 (lower is better)
Translates to: CLTFTESKAEVNGLSSRSISVPA*GDEPEY
Trigger: ATACTCTGGCTCATCACCTCAAGCAGGAACGCTTAT...AGACCTAGATGAGAGTCCATTTACTTCAGCCTTTGATTCAGTAAATGTTAAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR TCA 90 bp TATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCATTAATGGGCTGGGATCATCTGTaGGTGTTGAGAATCTGTCAG +
Preference number: 4 (lower is better)
Translates to: YSNPQCNSYLLSIRCSLMGWDHL*VLRICQ
Trigger: CTGACAGATTCTCAACACTCACAGATGATCCCAGCC...CATTAATGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000495955.5
CDS-3UTR TCA 90 bp GTAGTACTAGTCTCTACTTGGGGACAAGAAAATAGAATATGCAACTCAGAAAGGCTTGTCGACAACGAGTaGGATAAGCAATATATGGGG +
Preference number: 4 (lower is better)
Translates to: VVLVSTWGQENRICNSERLVDNE*DKQYMG
Trigger: CCCCATATATTGCTTATCTCACTCGTTGTCGACAAG...CCTTTCTGAGTTGCATATTCTATTTTCTTGTCCCCAAGTAGAGACTAGTACTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp TATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCATTAATGAATAGCCTTTCCAGGTaGGCCTGTGTGGTCTGTAGT +
Preference number: 4 (lower is better)
Translates to: YSNPQCNSYLLSIRCSLMNSLSR*ACVVCS
Trigger: ACTACAGACCACACAGGCTCACCTGGAAAGGCTATT...CATTAATGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp GTAGTACTAGTCTCTACTTGGGGACAAGAAAATAGAATATGCAACTCAGAAAGGTATTGTCCTGATTTCTaGTTGTGCAGATGGCCATGG +
Preference number: 4 (lower is better)
Translates to: VVLVSTWGQENRICNSERYCPDF*LCRWPW
Trigger: CCATGGCCATCTGCACAATCAGAAATCAGGACAATA...CCTTTCTGAGTTGCATATTCTATTTTCTTGTCCCCAAGTAGAGACTAGTACTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp AAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTAAGCACTTATTGTCCTaGTTTCTGATTGTGCAGATG +
Preference number: 4 (lower is better)
Translates to: KQSSAFKAADAPSQRSVCKHLLS*FLIVQM
Trigger: CATCTGCACAATCAGAAATCAGGACAATAAGTGCTT...ACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp ACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTAAGCACTTATTGTCCTaGTTTCTGATTGTGCAGATG +
Preference number: 4 (lower is better)
Translates to: TKQSSAFKAADAPSQRSVKHLLS*FLIVQM
Trigger: CATCTGCACAATCAGAAATCAGGACAATAAGTGCTT...AACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp ATCATACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATAGAGATCTGTTTGTCTaGTTAACAGTCTGCTGCCTT +
Preference number: 4 (lower is better)
Translates to: IIQNNLQPSKQLMHLLRDRDLFV*LTVCCL
Trigger: AAGGCAGCAGACTGTTAATCAGACAAACAGATCTCT...ATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGTATGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp AAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTAACCACCATAAAGTATaGGCTATCCACTGTTCCTTT +
Preference number: 4 (lower is better)
Translates to: KQSSAFKAADAPSQRSVCNHHKV*AIHCSF
Trigger: AAAGGAACAGTGGATAGCTCATACTTTATGGTGGTT...ACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR TCA 90 bp TATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCATTAATGAGGAAACACACGAAGTaGAACCAGACAGTGATGGCC +
Preference number: 4 (lower is better)
Translates to: YSNPQCNSYLLSIRCSLMRKHTK*NQTVMA
Trigger: GGCCATCACTGTCTGGTTTCACTTCGTGTGTTTCCT...CATTAATGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR TCA 90 bp AGTAATCGCAAATACCTCATCACTGTTAATCCACTTACTAAAAATCCTTTGGGCACACAGCTGGCCTCGTaGTGTATTTACGATGGGATT +
Preference number: 4 (lower is better)
Translates to: SNRKYLITVNPLTKNPLGTQLAS*CIYDGI
Trigger: AATCCCATCGTAAATACATCACGAGGCCAGCTGTGT...GCCCAAAGGATTTTTAGTAAGTGGATTAACAGTGATGAGGTATTTGCGATTACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR TCA 90 bp AAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTATCTTTAGGCATGGCTaGAACAAAACGTTTTCTCCA +
Preference number: 4 (lower is better)
Translates to: KQSSAFKAADAPSQRSVCIFRHG*NKTFSP
Trigger: TGGAGAAAACGTTTTGTTTCAGCCATGCCTAAAGAT...ACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394083.6
ENST00000470056.5
CDS-3UTR GCA 90 bp TATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCATTAATGGAGATCAGTACACATTaGCCTGACCTCCCCAACTTC +
Preference number: 4 (lower is better)
Translates to: YSNPQCNSYLLSIRCSLMEISTH*PDLPNF
Trigger: GAAGTTGGGGAGGTCAGGGCAATGTGTACTGATCTC...CATTAATGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp ATGCAACTCAGAAAGGAAAGAGCCCAAAGACGAGAGAACCTGCTTGTTAGCTCACATCAGATTAAATCGTaGTACTTCATTAATAGGAGC +
Preference number: 4 (lower is better)
Translates to: MQLRKERAQRRENLLVSSHQIKS*YFINRS
Trigger: GCTCCTATTAATGAAGTAGCACGATTTAATCTGATG...TGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGCTCTTTCCTTTCTGAGTTGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp TTGTATCCAGTGTCTATCACAGTGCCTCATGTGCAAGACACATCCACTCTCACACATCAGATTAAATCGTaGTACTTCATTAATAGGAGC +
Preference number: 4 (lower is better)
Translates to: LYPVSITVPHVQDTSTLTHQIKS*YFINRS
Trigger: GCTCCTATTAATGAAGTAGCACGATTTAATCTGATG...TGTGAGAGTGGATGTGTCTTGCACATGAGGCACTGTGATAGACACTGGATACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394084.5
CDS-3UTR GCA 90 bp GCCCAAAGACGAGAGAACCTGCTTGTTAGCTCATTAACCTGTTTAGTAAAGATCGAGTCATTTCTAAACTaGTACTTTTTCCTGGCTTGG +
Preference number: 4 (lower is better)
Translates to: AQRRENLLVSSLTCLVKIESFLN*YFFLAW
Trigger: CCAAGCCAGGAAAAAGTAGCAGTTTAGAAATGACTC...GATCTTTACTAAACAGGTTAATGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp AAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTGAGTCATTTCTAAACTaGTACTTTTTCCTGGCTTGG +
Preference number: 4 (lower is better)
Translates to: KQSSAFKAADAPSQRSVCESFLN*YFFLAW
Trigger: CCAAGCCAGGAAAAAGTAGCAGTTTAGAAATGACTC...ACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp TTGAATGCCTCCATTTCAGCTGGAGTTAAAACATGGGAACCAAAGTTTGGCAACTCGATTCTTTTTATTTaGTGGAGTGGTTGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: LNASISAGVKTWEPKFGNSILFI*WSGCWR
Trigger: TCTCCAGCAACCACTCCAGCAAATAAAAAGAATCGA...GTTGCCAAACTTTGGTTCCCATGTTTTAACTCCAGCTGAAATGGAGGCATTCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR GCA 90 bp ACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTCGATTCTTTTTATTTaGTGGAGTGGTTGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: TKQSSAFKAADAPSQRSVSILFI*WSGCWR
Trigger: TCTCCAGCAACCACTCCAGCAAATAAAAAGAATCGA...AACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp AGTAATCGCAAATACCTCATCACTGTTAATCCACTTACTAAAAATCCTTTGGGCCTTCCAGATTATCACTaGAGAGGGAAAAGCGCAAGG +
Preference number: 4 (lower is better)
Translates to: SNRKYLITVNPLTKNPLGLPDYH*RGKSAR
Trigger: CCTTGCGCTTTTCCCTCTGCAGTGATAATCTGGAAG...GCCCAAAGGATTTTTAGTAAGTGGATTAACAGTGATGAGGTATTTGCGATTACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR GCA 90 bp GTAGTACTAGTCTCTACTTGGGGACAAGAAAATAGAATATGCAACTCAGAAAGGCTATATCAGAGCTCCTaGTTCGAACTAGTCTCTCAG +
Preference number: 4 (lower is better)
Translates to: VVLVSTWGQENRICNSERLYQSS*FELVSQ
Trigger: CTGAGAGACTAGTTCGAAGCAGGAGCTCTGATATAG...CCTTTCTGAGTTGCATATTCTATTTTCTTGTCCCCAAGTAGAGACTAGTACTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp ACAGGCATGACTTCCATTTATGAAACCACTATCACTTCCTGCAAAGAACAAGAACTATATCAGAGCTCCTaGTTCGAACTAGTCTCTCAG +
Preference number: 4 (lower is better)
Translates to: TGMTSIYETTITSCKEQELYQSS*FELVSQ
Trigger: CTGAGAGACTAGTTCGAAGCAGGAGCTCTGATATAG...TTCTTGTTCTTTGCAGGAAGTGATAGTGGTTTCATAAATGGAAGTCATGCCTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497580.5
CDS-3UTR GCA 90 bp GCCCAAAGACGAGAGAACCTGCTTGTTAGCTCATTAACCTGTTTAGTAAAGATCTGTCTTAAGTACATCTaGATTGAGCCTCTGAATGAG +
Preference number: 4 (lower is better)
Translates to: AQRRENLLVSSLTCLVKICLKYI*IEPLNE
Trigger: CTCATTCAGAGGCTCAATGCAGATGTACTTAAGACA...GATCTTTACTAAACAGGTTAATGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp GCCCAAAGACGAGAGAACCTGCTTGTTAGCTCATTAACCTGTTTAGTAAAGATCTTGCTTCGCAATCCATaGTGTACGATACAACTTTTC +
Preference number: 4 (lower is better)
Translates to: AQRRENLLVSSLTCLVKILLRNP*CTIQLF
Trigger: GAAAAGTTGTATCGTACAGCATGGATTGCGAAGCAA...GATCTTTACTAAACAGGTTAATGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp TATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCATTAATGCCGTATCATCAGATGTaGTACCCAGTCCAGAACAGC +
Preference number: 4 (lower is better)
Translates to: YSNPQCNSYLLSIRCSLMPYHQM*YPVQNS
Trigger: GCTGTTCTGGACTGGGTAGCACATCTGATGATACGG...CATTAATGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp TATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCATTAATGTCTTCACTCGCGTTTTaGCATATGACATCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: YSNPQCNSYLLSIRCSLMSSLAF*HMTSWA
Trigger: GGCCCAGGATGTCATATGGCAAAACGCGAGTGAAGA...CATTAATGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp TGCTTAACATTTACTGAATCAAAGGCTGAAGTAAATGGACTCTCATCTAGGTCTCTCAATGGCCAGCTGTaGATCTTGAAGCTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: CLTFTESKAEVNGLSSRSLNGQL*ILKLFF
Trigger: GAAGAACAGCTTCAAGATGCACAGCTGGCCATTGAG...AGACCTAGATGAGAGTCCATTTACTTCAGCCTTTGATTCAGTAAATGTTAAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR GCA 90 bp TCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCTGATTAAGAGCTCTGTGATTTaGAGTCACTACTTTAGACAA +
Preference number: 4 (lower is better)
Translates to: SSAFKAADAPSQRSVCLIKSSVI*SHYFRQ
Trigger: TTGTCTAAAGTAGTGACTGCAAATCACAGAGCTCTT...AATCAGACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp AAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCAAACAGGGTGGATTTaGCTTTATCAACACAAACAC +
Preference number: 4 (lower is better)
Translates to: KQSSAFKAADAPSQRSVCQTGWI*LYQHKH
Trigger: GTGTTTGTGTTGATAAAGGCAAATCCACCCTGTTTG...ACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp GCCCAAAGACGAGAGAACCTGCTTGTTAGCTCATTAACCTGTTTAGTAAAGATCCAAACAGGGTGGATTTaGCTTTATCAACACAAACAC +
Preference number: 4 (lower is better)
Translates to: AQRRENLLVSSLTCLVKIQTGWI*LYQHKH
Trigger: GTGTTTGTGTTGATAAAGGCAAATCCACCCTGTTTG...GATCTTTACTAAACAGGTTAATGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp GCCCAAAGACGAGAGAACCTGCTTGTTAGCTCATTAACCTGTTTAGTAAAGATCAAGCTACTGATATACTaGACAGTAGACAGCAAACAG +
Preference number: 4 (lower is better)
Translates to: AQRRENLLVSSLTCLVKIKLLIY*TVDSKQ
Trigger: CTGTTTGCTGTCTACTGTGCAGTATATCAGTAGCTT...GATCTTTACTAAACAGGTTAATGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp ATGTCATGTATGGTAATCAGTCTATCTCCTAATGCAGGCTCACAAACTTCCACGAAGCTACTGATATACTaGACAGTAGACAGCAAACAG +
Preference number: 4 (lower is better)
Translates to: MSCMVISLSPNAGSQTSTKLLIY*TVDSKQ
Trigger: CTGTTTGCTGTCTACTGTGCAGTATATCAGTAGCTT...CGTGGAAGTTTGTGAGCCTGCATTAGGAGATAGACTGATTACCATACATGACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR GCA 90 bp AAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTAAGCTACTGATATACTaGACAGTAGACAGCAAACAG +
Preference number: 4 (lower is better)
Translates to: KQSSAFKAADAPSQRSVCKLLIY*TVDSKQ
Trigger: CTGTTTGCTGTCTACTGTGCAGTATATCAGTAGCTT...ACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp CACCACTATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCAAATGAATTCTACTGCTaGTGTGAACTGCATCCACCA +
Preference number: 4 (lower is better)
Translates to: HHYSNPQCNSYLLSIRCSNEFYC*CELHPP
Trigger: TGGTGGATGCAGTTCACAGCAGCAGTAGAATTCATT...TGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATAGTGGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp TCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCTGATTTTTAATGAATTCTACTaGTGCTGTGAACTGCATCCA +
Preference number: 4 (lower is better)
Translates to: SSAFKAADAPSQRSVCLIFNEFY*CCELHP
Trigger: TGGATGCAGTTCACAGCAGCAGTAGAATTCATTAAA...AATCAGACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp ATGCAACTCAGAAAGGAAAGAGCCCAAAGACGAGAGAACCTGCTTGTTAGCTCAAAATGCCTGATGCTGTaGAGTATCATACAAAACAAT +
Preference number: 4 (lower is better)
Translates to: MQLRKERAQRRENLLVSSKCLML*SIIQNN
Trigger: ATTGTTTTGTATGATACTGCACAGCATCAGGCATTT...TGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGCTCTTTCCTTTCTGAGTTGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp AAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTAGATCTGCTTTAAAATaGCTGATGCTGTGCAGTATC +
Preference number: 4 (lower is better)
Translates to: KQSSAFKAADAPSQRSVCRSALK*LMLCSI
Trigger: GATACTGCACAGCATCAGGCATTTTAAAGCAGATCT...ACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp ACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTAGATCTGCTTTAAAATaGCTGATGCTGTGCAGTATC +
Preference number: 4 (lower is better)
Translates to: TKQSSAFKAADAPSQRSVRSALK*LMLCSI
Trigger: GATACTGCACAGCATCAGGCATTTTAAAGCAGATCT...AACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp GTAGTACTAGTCTCTACTTGGGGACAAGAAAATAGAATATGCAACTCAGAAAGGAAAGATGCCTGGAAATaGTCCCAACAACAAGGGACT +
Preference number: 4 (lower is better)
Translates to: VVLVSTWGQENRICNSERKDAWK*SQQQGT
Trigger: AGTCCCTTGTTGTTGGGAGCATTTCCAGGCATCTTT...CCTTTCTGAGTTGCATATTCTATTTTCTTGTCCCCAAGTAGAGACTAGTACTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR GCA 90 bp CACCACTATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCAAGTTCCCTTAAAAGATaGCTGGAAATGCTCCCAACA +
Preference number: 4 (lower is better)
Translates to: HHYSNPQCNSYLLSIRCSSSLKR*LEMLPT
Trigger: TGTTGGGAGCATTTCCAGGCATCTTTTAAGGGAACT...TGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATAGTGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR GCA 90 bp GGAGCTCTGTCTGGGATTTCTGCAGTATATTATTTCGGAGGAGAAGAACCACCATTCGAAGTCTTCTGCTaGTTAACATTTACTGAATCA +
Preference number: 4 (lower is better)
Translates to: GALSGISAVYYFGGEEPPFEVFC*LTFTES
Trigger: TGATTCAGTAAATGTTAAGCAGCAGAAGACTTCGAA...TGGTGGTTCTTCTCCTCCGAAATAATATACTGCAGAAATCCCAGACAGAGCTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR GCA 90 bp ACCAAGGTCTGTTCCTGTCTGATTTCTCATCATCGCTATCTTTGCGTTCTTCAGACATTTCTAAAGCTCTaGCTTAGCATTCATCTGAGT +
Preference number: 4 (lower is better)
Translates to: TKVCSCLISHHRYLCVLQTFLKL*LSIHLS
Trigger: ACTCAGATGAATGCTAAGGCAGAGCTTTAGAAATGT...CTGAAGAACGCAAAGATAGCGATGATGAGAAATCAGACAGGAACAGACCTTGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497580.5
CDS-3UTR CCA 90 bp ACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTCTAGCTTTGCTTCATTaGACTCCACCATTTCTTGAA +
Preference number: 4 (lower is better)
Translates to: TKQSSAFKAADAPSQRSVLALLH*TPPFLE
Trigger: TTCAAGAAATGGTGGAGTCCAATGAAGCAAAGCTAG...AACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp ACGCTTAGTATGCTGAAGGGTACTAGTCTCTTCTTGCTCTCCCTAACTAAACTACTAGCTTTGCTTCATTaGACTCCACCATTTCTTGAA +
Preference number: 4 (lower is better)
Translates to: TLSMLKGTSLFLLSLTKLLALLH*TPPFLE
Trigger: TTCAAGAAATGGTGGAGTCCAATGAAGCAAAGCTAG...TAGTTTAGTTAGGGAGAGCAAGAAGAGACTAGTACCCTTCAGCATACTAAGCGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394084.5
CDS-3UTR CCA 90 bp AAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCTAGCTTTGCTTCATTaGACTCCACCATTTCTTGAA +
Preference number: 4 (lower is better)
Translates to: KQSSAFKAADAPSQRSVCLALLH*TPPFLE
Trigger: TTCAAGAAATGGTGGAGTCCAATGAAGCAAAGCTAG...ACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp ACCGTGAGTTATTTCATCCATGTCTGGACTAGTGACAGAATCTTTACCCCCAAAGGTCTTCAATCTTATTaGGAATATCCTCAGAGGTTG +
Preference number: 4 (lower is better)
Translates to: TVSYFIHVWTSDRIFTPKGLQSY*EYPQRL
Trigger: CAACCTCTGAGGATATTCCCAATAAGATTGAAGACC...TTTGGGGGTAAAGATTCTGTCACTAGTCCAGACATGGATGAAATAACTCACGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR CCA 90 bp GCCCAAAGACGAGAGAACCTGCTTGTTAGCTCATTAACCTGTTTAGTAAAGATCGGTCTTCAATCTTATTaGGAATATCCTCAGAGGTTG +
Preference number: 4 (lower is better)
Translates to: AQRRENLLVSSLTCLVKIGLQSY*EYPQRL
Trigger: CAACCTCTGAGGATATTCCCAATAAGATTGAAGACC...GATCTTTACTAAACAGGTTAATGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp AAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTGGTCTTCAATCTTATTaGGAATATCCTCAGAGGTTG +
Preference number: 4 (lower is better)
Translates to: KQSSAFKAADAPSQRSVCGLQSY*EYPQRL
Trigger: CAACCTCTGAGGATATTCCCAATAAGATTGAAGACC...ACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp GGAGCTCTGTCTGGGATTTCTGCAGTATATTATTTCGGAGGAGAAGAACCACCATATTTCATCCATGTCTaGACTAGTGACAGAATCTTT +
Preference number: 4 (lower is better)
Translates to: GALSGISAVYYFGGEEPPYFIHV*TSDRIF
Trigger: AAAGATTCTGTCACTAGTCCAGACATGGATGAAATA...TGGTGGTTCTTCTCCTCCGAAATAATATACTGCAGAAATCCCAGACAGAGCTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR CCA 90 bp ATCATACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATGCTGGAGTTAAAACATaGGAACCAAAGTTTGGCAAC +
Preference number: 4 (lower is better)
Translates to: IIQNNLQPSKQLMHLLRDAGVKT*EPKFGN
Trigger: GTTGCCAAACTTTGGTTCCCATGTTTTAACTCCAGC...ATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGTATGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp TATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCATTAATGTTGGCTTGCAGAGTCTaGGAGATCATCAGCCGAGAT +
Preference number: 4 (lower is better)
Translates to: YSNPQCNSYLLSIRCSLMLACRV*EIISRD
Trigger: ATCTCGGCTGATGATCTCCCAGACTCTGCAAGCCAA...CATTAATGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp CACCACTATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCATCGAAGATAAACCTCTaGTATCTGAAGAGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: HHYSNPQCNSYLLSIRCSSKINL*YLKSSV
Trigger: CACAGAGCTCTTCAGATACCAGAGGTTTATCTTCGA...TGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATAGTGGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp GCCCAAAGACGAGAGAACCTGCTTGTTAGCTCATTAACCTGTTTAGTAAAGATCAAGGGAATCCAAGAATaGAGGTCTAGACATTTCCTA +
Preference number: 4 (lower is better)
Translates to: AQRRENLLVSSLTCLVKIKGIQE*RSRHFL
Trigger: TAGGAAATGTCTAGACCTCCATTCTTGGATTCCCTT...GATCTTTACTAAACAGGTTAATGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp ACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTAAGGGAATCCAAGAATaGAGGTCTAGACATTTCCTA +
Preference number: 4 (lower is better)
Translates to: TKQSSAFKAADAPSQRSVKGIQE*RSRHFL
Trigger: TAGGAAATGTCTAGACCTCCATTCTTGGATTCCCTT...AACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp AAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTAAGGGAATCCAAGAATaGAGGTCTAGACATTTCCTA +
Preference number: 4 (lower is better)
Translates to: KQSSAFKAADAPSQRSVCKGIQE*RSRHFL
Trigger: TAGGAAATGTCTAGACCTCCATTCTTGGATTCCCTT...ACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp TATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCATTAATGAATCTAGTTTCTGGCTaGGCAGGGTGGTTCACGCTT +
Preference number: 4 (lower is better)
Translates to: YSNPQCNSYLLSIRCSLMNLVSG*AGWFTL
Trigger: AAGCGTGAACCACCCTGCCCAGCCAGAAACTAGATT...CATTAATGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR CCA 90 bp CACCACTATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCAATACATATAATTTTGTaGTTGGGCACGGTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: HHYSNPQCNSYLLSIRCSIHIIL*LGTVAH
Trigger: GTGAGCCACCGTGCCCAACCACAAAATTATATGTAT...TGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATAGTGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR TCA 90 bp GTAGTACTAGTCTCTACTTGGGGACAAGAAAATAGAATATGCAACTCAGAAAGGCATGTAAAGTGGCTGTaGGGAAAAGTTTGGCAGAAA +
Preference number: 4 (lower is better)
Translates to: VVLVSTWGQENRICNSERHVKWL*GKVWQK
Trigger: TTTCTGCCAAACTTTTCCTCACAGCCACTTTACATG...CCTTTCTGAGTTGCATATTCTATTTTCTTGTCCCCAAGTAGAGACTAGTACTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp GTAGTACTAGTCTCTACTTGGGGACAAGAAAATAGAATATGCAACTCAGAAAGGAGGGTTTTGTACATCTaGGACACGATCCACCTTAAA +
Preference number: 4 (lower is better)
Translates to: VVLVSTWGQENRICNSERRVLYI*DTIHLK
Trigger: TTTAAGGTGGATCGTGTCTCAGATGTACAAAACCCT...CCTTTCTGAGTTGCATATTCTATTTTCTTGTCCCCAAGTAGAGACTAGTACTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp TGCTTAACATTTACTGAATCAAAGGCTGAAGTAAATGGACTCTCATCTAGGTCTCTATCTTCTCTCAGTTaGTCTCCAGACATCACACTC +
Preference number: 4 (lower is better)
Translates to: CLTFTESKAEVNGLSSRSLSSLS*SPDITL
Trigger: GAGTGTGATGTCTGGAGATCAACTGAGAGAAGATAG...AGACCTAGATGAGAGTCCATTTACTTCAGCCTTTGATTCAGTAAATGTTAAGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR TCA 90 bp ATCATACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATAATGGTTTCTTGAGATaGTCCTTCATGGTCCATATG +
Preference number: 4 (lower is better)
Translates to: IIQNNLQPSKQLMHLLRDNGFLR*SFMVHM
Trigger: CATATGGACCATGAAGGATCATCTCAAGAAACCATT...ATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGTATGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp GTAGTACTAGTCTCTACTTGGGGACAAGAAAATAGAATATGCAACTCAGAAAGGCTCACTCACTGTTTCTaGTATGTCCCTATCATCTGT +
Preference number: 4 (lower is better)
Translates to: VVLVSTWGQENRICNSERLTHCF*YVPIIC
Trigger: ACAGATGATAGGGACATATCAGAAACAGTGAGTGAG...CCTTTCTGAGTTGCATATTCTATTTTCTTGTCCCCAAGTAGAGACTAGTACTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp TGCTTAACATTTACTGAATCAAAGGCTGAAGTAAATGGACTCTCATCTAGGTCTGATGAAGATGATGAATaGGGTGCAGCCACCAAAGAA +
Preference number: 4 (lower is better)
Translates to: CLTFTESKAEVNGLSSRSDEDDE*GAATKE
Trigger: TTCTTTGGTGGCTGCACCTCATTCATCATCTTCATC...AGACCTAGATGAGAGTCCATTTACTTCAGCCTTTGATTCAGTAAATGTTAAGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR TCA 90 bp TATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCATTAATGTCTGCATTGAGCCTCTaGATGAGCTGTTTCTCAGAG +
Preference number: 4 (lower is better)
Translates to: YSNPQCNSYLLSIRCSLMSALSL*MSCFSE
Trigger: CTCTGAGAAACAGCTCATTCAGAGGCTCAATGCAGA...CATTAATGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp TATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCATTAATGCTCTGGATATGTTCATaGAGAACCTGGTCGCGAAGT +
Preference number: 4 (lower is better)
Translates to: YSNPQCNSYLLSIRCSLMLWICS*RTWSRS
Trigger: ACTTCGCGACCAGGTTCTTCATGAACATATCCAGAG...CATTAATGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp AAGGGTACTAGTCTCTTCTTGCTCTCCCTAACTAAACTATCAACAGCCAACTTGACTGACATTTTGGGGTaGTACAATAAGACAAAGACT +
Preference number: 4 (lower is better)
Translates to: KGTSLFLLSLTKLSTANLTDILG*YNKTKT
Trigger: AGTCTTTGTCTTATTGTATCACCCCAAAATGTCAGT...CAAGTTGGCTGTTGATAGTTTAGTTAGGGAGAGCAAGAAGAGACTAGTACCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394084.5
CDS-3UTR TCA 90 bp AAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCTCAAATCTCTGTCATaGTTATCACCTGTACTTTCA +
Preference number: 4 (lower is better)
Translates to: KQSSAFKAADAPSQRSVCLKSLS*LSPVLS
Trigger: TGAAAGTACAGGTGATAATCATGACAGAGATTTGAG...ACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394104.6
ENST00000495955.5
CDS-3UTR TCA 90 bp CACCACTATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCAATCTTTAGGCATGGCTaGAACAAAACGTTTTCTCCA +
Preference number: 4 (lower is better)
Translates to: HHYSNPQCNSYLLSIRCSIFRHG*NKTFSP
Trigger: TGGAGAAAACGTTTTGTTTCAGCCATGCCTAAAGAT...TGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATAGTGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470056.5
CDS-3UTR GCA 90 bp CACCAAGGTCTGTTCCTGTCTGATTTCTCATCATCGCTATCTTTGCGTTCTTCACATCAGATTAAATCGTaGTACTTCATTAATAGGAGC +
Preference number: 4 (lower is better)
Translates to: HQGLFLSDFSSSLSLRSSHQIKS*YFINRS
Trigger: GCTCCTATTAATGAAGTAGCACGATTTAATCTGATG...TGAAGAACGCAAAGATAGCGATGATGAGAAATCAGACAGGAACAGACCTTGGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR GCA 90 bp GCCCAAAGACGAGAGAACCTGCTTGTTAGCTCATTAACCTGTTTAGTAAAGATCTATAAACCACAGTTCTaGTCAATCCTTCCAGAAGAT +
Preference number: 4 (lower is better)
Translates to: AQRRENLLVSSLTCLVKIYKPQF*SILPED
Trigger: ATCTTCTGGAAGGATTGAGCAGAACTGTGGTTTATA...GATCTTTACTAAACAGGTTAATGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp AAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTTATAAACCACAGTTCTaGTCAATCCTTCCAGAAGAT +
Preference number: 4 (lower is better)
Translates to: KQSSAFKAADAPSQRSVCYKPQF*SILPED
Trigger: ATCTTCTGGAAGGATTGAGCAGAACTGTGGTTTATA...ACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp CCAAAATCAGAGCTGCACTCAGATCTCAGGTCTTCAATCTTATTGGGAATATCCTATAAACCACAGTTCTaGTCAATCCTTCCAGAAGAT +
Preference number: 4 (lower is better)
Translates to: PKSELHSDLRSSILLGISYKPQF*SILPED
Trigger: ATCTTCTGGAAGGATTGAGCAGAACTGTGGTTTATA...GGATATTCCCAATAAGATTGAAGACCTGAGATCTGAGTGCAGCTCTGATTTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR GCA 90 bp CACCACTATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCAGAGTCATTTCTAAACTaGTACTTTTTCCTGGCTTGG +
Preference number: 4 (lower is better)
Translates to: HHYSNPQCNSYLLSIRCSESFLN*YFFLAW
Trigger: CCAAGCCAGGAAAAAGTAGCAGTTTAGAAATGACTC...TGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATAGTGGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp ATCATACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATGAGTCATTTCTAAACTaGTACTTTTTCCTGGCTTGG +
Preference number: 4 (lower is better)
Translates to: IIQNNLQPSKQLMHLLRDESFLN*YFFLAW
Trigger: CCAAGCCAGGAAAAAGTAGCAGTTTAGAAATGACTC...ATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGTATGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp ATCATACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATTCGATTCTTTTTATTTaGTGGAGTGGTTGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: IIQNNLQPSKQLMHLLRDSILFI*WSGCWR
Trigger: TCTCCAGCAACCACTCCAGCAAATAAAAAGAATCGA...ATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGTATGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp AGTAATCGCAAATACCTCATCACTGTTAATCCACTTACTAAAAATCCTTTGGGCCCTCCATCCGAAAGCTaGATGTTTAGGACCTCATTT +
Preference number: 4 (lower is better)
Translates to: SNRKYLITVNPLTKNPLGPPSES*MFRTSF
Trigger: AAATGAGGTCCTAAACATGCAGCTTTCGGATGGAGG...GCCCAAAGGATTTTTAGTAAGTGGATTAACAGTGATGAGGTATTTGCGATTACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR GCA 90 bp CACCACTATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCAGCACCTGCAATTTCTTaGAAGCGATCTTCATCAATA +
Preference number: 4 (lower is better)
Translates to: HHYSNPQCNSYLLSIRCSAPAIS*KRSSSI
Trigger: TATTGATGAAGATCGCTTGCAAGAAATTGCAGGTGC...TGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATAGTGGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp CACCACTATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCATGTCTTAAGTACATCTaGATTGAGCCTCTGAATGAG +
Preference number: 4 (lower is better)
Translates to: HHYSNPQCNSYLLSIRCSCLKYI*IEPLNE
Trigger: CTCATTCAGAGGCTCAATGCAGATGTACTTAAGACA...TGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATAGTGGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp ATCATACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATTGTCTTAAGTACATCTaGATTGAGCCTCTGAATGAG +
Preference number: 4 (lower is better)
Translates to: IIQNNLQPSKQLMHLLRDCLKYI*IEPLNE
Trigger: CTCATTCAGAGGCTCAATGCAGATGTACTTAAGACA...ATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGTATGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp GCCCAAAGACGAGAGAACCTGCTTGTTAGCTCATTAACCTGTTTAGTAAAGATCAAATTGATTCTCTGTTaGTTCGCAATCCATGCTGTA +
Preference number: 4 (lower is better)
Translates to: AQRRENLLVSSLTCLVKIKLILC*FAIHAV
Trigger: TACAGCATGGATTGCGAAGCAACAGAGAATCAATTT...GATCTTTACTAAACAGGTTAATGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp ACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTAAATTGATTCTCTGTTaGTTCGCAATCCATGCTGTA +
Preference number: 4 (lower is better)
Translates to: TKQSSAFKAADAPSQRSVKLILC*FAIHAV
Trigger: TACAGCATGGATTGCGAAGCAACAGAGAATCAATTT...AACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp AAGGTCTGTTCCTGTCTGATTTCTCATCATCGCTATCTTTGCGTTCTTCAGTCTAAATTGATTCTCTGTTaGTTCGCAATCCATGCTGTA +
Preference number: 4 (lower is better)
Translates to: KVCSCLISHHRYLCVLQSKLILC*FAIHAV
Trigger: TACAGCATGGATTGCGAAGCAACAGAGAATCAATTT...AGACTGAAGAACGCAAAGATAGCGATGATGAGAAATCAGACAGGAACAGACCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497580.5
CDS-3UTR GCA 90 bp TATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCATTAATGTTCATAGTTTGCCATTaGTCCATCACTGGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: YSNPQCNSYLLSIRCSLMFIVCH*SITGAG
Trigger: ACCAGCCCCAGTGATGGAGCAATGGCAAACTATGAA...CATTAATGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp GTAGTACTAGTCTCTACTTGGGGACAAGAAAATAGAATATGCAACTCAGAAAGGTGTACTTTCATAGTTTaGCATTGCTCCATCACTGGG +
Preference number: 4 (lower is better)
Translates to: VVLVSTWGQENRICNSERCTFIV*HCSITG
Trigger: CCCAGTGATGGAGCAATGGCAAACTATGAAAGTACA...CCTTTCTGAGTTGCATATTCTATTTTCTTGTCCCCAAGTAGAGACTAGTACTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp GTAGTACTAGTCTCTACTTGGGGACAAGAAAATAGAATATGCAACTCAGAAAGGAGTTTTATCGTCAGCTaGGGTGAGTTTCTGAAAGTC +
Preference number: 4 (lower is better)
Translates to: VVLVSTWGQENRICNSERSFIVS*GEFLKV
Trigger: GACTTTCAGAAACTCACCGCAGCTGACGATAAAACT...CCTTTCTGAGTTGCATATTCTATTTTCTTGTCCCCAAGTAGAGACTAGTACTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp TATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCATTAATGGACATCCTGGGCCATTaGACCATAAAGAAACTGCAG +
Preference number: 4 (lower is better)
Translates to: YSNPQCNSYLLSIRCSLMDILGH*TIKKLQ
Trigger: CTGCAGTTTCTTTATGGTGCAATGGCCCAGGATGTC...CATTAATGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp ACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTAAGAGCTCTGTGATTTaGAGTCACTACTTTAGACAA +
Preference number: 4 (lower is better)
Translates to: TKQSSAFKAADAPSQRSVKSSVI*SHYFRQ
Trigger: TTGTCTAAAGTAGTGACTGCAAATCACAGAGCTCTT...AACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp TATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCATTAATGTGCAGATGGCCATGGTaGTTCTCGAAGATAAACCTC +
Preference number: 4 (lower is better)
Translates to: YSNPQCNSYLLSIRCSLMCRWPW*FSKINL
Trigger: GAGGTTTATCTTCGAGAAGCACCATGGCCATCTGCA...CATTAATGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp CACCACTATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCACAAACAGGGTGGATTTaGCTTTATCAACACAAACAC +
Preference number: 4 (lower is better)
Translates to: HHYSNPQCNSYLLSIRCSQTGWI*LYQHKH
Trigger: GTGTTTGTGTTGATAAAGGCAAATCCACCCTGTTTG...TGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATAGTGGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp ATGTCATGTATGGTAATCAGTCTATCTCCTAATGCAGGCTCACAAACTTCCACGTTTAATGAATTCTACTaGTGCTGTGAACTGCATCCA +
Preference number: 4 (lower is better)
Translates to: MSCMVISLSPNAGSQTSTFNEFY*CCELHP
Trigger: TGGATGCAGTTCACAGCAGCAGTAGAATTCATTAAA...CGTGGAAGTTTGTGAGCCTGCATTAGGAGATAGACTGATTACCATACATGACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR GCA 90 bp TCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCTGATTAAATGCCTGATGCTGTaGAGTATCATACAAAACAAT +
Preference number: 4 (lower is better)
Translates to: SSAFKAADAPSQRSVCLIKCLML*SIIQNN
Trigger: ATTGTTTTGTATGATACTGCACAGCATCAGGCATTT...AATCAGACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp ATCATACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATAGATCTGCTTTAAAATaGCTGATGCTGTGCAGTATC +
Preference number: 4 (lower is better)
Translates to: IIQNNLQPSKQLMHLLRDRSALK*LMLCSI
Trigger: GATACTGCACAGCATCAGGCATTTTAAAGCAGATCT...ATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGTATGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp AAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTTATTCTAATCCTCAGTaGAACTCATACCTTCTTTCC +
Preference number: 4 (lower is better)
Translates to: KQSSAFKAADAPSQRSVCYSNPQ*NSYLLS
Trigger: GGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATA...ACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp ACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTATTCTAATCCTCAGTaGAACTCATACCTTCTTTCC +
Preference number: 4 (lower is better)
Translates to: TKQSSAFKAADAPSQRSVYSNPQ*NSYLLS
Trigger: GGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATA...AACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp GTAGTACTAGTCTCTACTTGGGGACAAGAAAATAGAATATGCAACTCAGAAAGGTTACAGCCAATGAAGTaGACGACTCTGTACATGGAT +
Preference number: 4 (lower is better)
Translates to: VVLVSTWGQENRICNSERLQPMK*TTLYMD
Trigger: ATCCATGTACAGAGTCGTGCACTTCATTGGCTGTAA...CCTTTCTGAGTTGCATATTCTATTTTCTTGTCCCCAAGTAGAGACTAGTACTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR CCA 90 bp GTAGTACTAGTCTCTACTTGGGGACAAGAAAATAGAATATGCAACTCAGAAAGGTTTTATTTGCTGGAGTaGTTGCTGGAGATAGCTGAG +
Preference number: 4 (lower is better)
Translates to: VVLVSTWGQENRICNSERFYLLE*LLEIAE
Trigger: CTCAGCTATCTCCAGCAACCACTCCAGCAAATAAAA...CCTTTCTGAGTTGCATATTCTATTTTCTTGTCCCCAAGTAGAGACTAGTACTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp TATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCATTAATGATGGGAACCAAAGTTTaGCAACCTGGCCTCATTTCC +
Preference number: 4 (lower is better)
Translates to: YSNPQCNSYLLSIRCSLMMGTKV*QPGLIS
Trigger: GGAAATGAGGCCAGGTTGCCAAACTTTGGTTCCCAT...CATTAATGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp AAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTGAGATAAGCAATATATaGGGCTCTTTTTCTGTAGTC +
Preference number: 4 (lower is better)
Translates to: KQSSAFKAADAPSQRSVCEISNI*GSFSVV
Trigger: GACTACAGAAAAAGAGCCCCATATATTGCTTATCTC...ACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp ACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTGAGATAAGCAATATATaGGGCTCTTTTTCTGTAGTC +
Preference number: 4 (lower is better)
Translates to: TKQSSAFKAADAPSQRSVEISNI*GSFSVV
Trigger: GACTACAGAAAAAGAGCCCCATATATTGCTTATCTC...AACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp GTAGTACTAGTCTCTACTTGGGGACAAGAAAATAGAATATGCAACTCAGAAAGGAGACAGCAAACAGGGTaGATTTGCCTTTATCAACAC +
Preference number: 4 (lower is better)
Translates to: VVLVSTWGQENRICNSERRQQTG*ICLYQH
Trigger: GTGTTGATAAAGGCAAATCCACCCTGTTTGCTGTCT...CCTTTCTGAGTTGCATATTCTATTTTCTTGTCCCCAAGTAGAGACTAGTACTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp CACCACTATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCAAAGGGAATCCAAGAATaGAGGTCTAGACATTTCCTA +
Preference number: 4 (lower is better)
Translates to: HHYSNPQCNSYLLSIRCSKGIQE*RSRHFL
Trigger: TAGGAAATGTCTAGACCTCCATTCTTGGATTCCCTT...TGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATAGTGGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp ATCATACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATAAAATTAGCTGGGTGTaGTGGCATACACTTGTAATC +
Preference number: 4 (lower is better)
Translates to: IIQNNLQPSKQLMHLLRDKISWV*WHTLVI
Trigger: GATTACAAGTGTATGCCACCACACCCAGCTAATTTT...ATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGTATGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR CCA 90 bp GCCCAAAGACGAGAGAACCTGCTTGTTAGCTCATTAACCTGTTTAGTAAAGATCCGATTTGAAGGACCATaGAGTTTGTTTTCATCAACA +
Preference number: 4 (lower is better)
Translates to: AQRRENLLVSSLTCLVKIRFEGP*SLFSST
Trigger: TGTTGATGAAAACAAACTCCATGGTCCTTCAAATCG...GATCTTTACTAAACAGGTTAATGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394083.6
3UTR CAA 72 bp CTCCTGTTCCCCTGGCTTAAACACTTTTTCCTCATCTaGTTTACTTTGTCTAACTCCCATTCATCACAAAGT +
Preference number: 4 (lower is better)
Translates to: LLFPWLKHFFLI*FTLSNSHSSQS
Trigger: ACTTTGTGATGAATGGGAGTTAGACAAAGTAAACAAGATGAGGAAAAAGTGTTTAAGCCAGGGGAACAGGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394084.5
CDS-3UTR TCA 90 bp TTTTTCCTCATCTTGTTTACTTTGTCTAACTCCCATTCATCACAAAGTGCAAACGGATCTGTTTCCAGGTaGTCTTCATCTTCAACAAGC +
Preference number: 4 (lower is better)
Translates to: FFLILFTLSNSHSSQSANGSVSR*SSSSTS
Trigger: GCTTGTTGAAGATGAAGATCACCTGGAAACAGATCC...GTTTGCACTTTGTGATGAATGGGAGTTAGACAAAGTAAACAAGATGAGGAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394084.5
CDS-3UTR TCA 90 bp TATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCATTAATGGGATCTGTTTCCAGGTaGTCTTCATCTTCAACAAGC +
Preference number: 4 (lower is better)
Translates to: YSNPQCNSYLLSIRCSLMGSVSR*SSSSTS
Trigger: GCTTGTTGAAGATGAAGATCACCTGGAAACAGATCC...CATTAATGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp TATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCATTAATGCTATCTTCTCTCAGTTaGTCTCCAGACATCACACTC +
Preference number: 4 (lower is better)
Translates to: YSNPQCNSYLLSIRCSLMLSSLS*SPDITL
Trigger: GAGTGTGATGTCTGGAGATCAACTGAGAGAAGATAG...CATTAATGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp GTAGTACTAGTCTCTACTTGGGGACAAGAAAATAGAATATGCAACTCAGAAAGGAATGGTTTCTTGAGATaGTCCTTCATGGTCCATATG +
Preference number: 4 (lower is better)
Translates to: VVLVSTWGQENRICNSERNGFLR*SFMVHM
Trigger: CATATGGACCATGAAGGATCATCTCAAGAAACCATT...CCTTTCTGAGTTGCATATTCTATTTTCTTGTCCCCAAGTAGAGACTAGTACTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp AGTAATCGCAAATACCTCATCACTGTTAATCCACTTACTAAAAATCCTTTGGGCCTCACTCACTGTTTCTaGTATGTCCCTATCATCTGT +
Preference number: 4 (lower is better)
Translates to: SNRKYLITVNPLTKNPLGLTHCF*YVPIIC
Trigger: ACAGATGATAGGGACATATCAGAAACAGTGAGTGAG...GCCCAAAGGATTTTTAGTAAGTGGATTAACAGTGATGAGGTATTTGCGATTACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR TCA 90 bp TATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCATTAATGAGAAGCCCCTTCATGTaGAGACAGTGGATCAAACAT +
Preference number: 4 (lower is better)
Translates to: YSNPQCNSYLLSIRCSLMRSPFM*RQWIKH
Trigger: ATGTTTGATCCACTGTCTTCACATGAAGGGGCTTCT...CATTAATGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp GTAGTACTAGTCTCTACTTGGGGACAAGAAAATAGAATATGCAACTCAGAAAGGAAGCACTTATTGTCCTaGTTTCTGATTGTGCAGATG +
Preference number: 4 (lower is better)
Translates to: VVLVSTWGQENRICNSERKHLLS*FLIVQM
Trigger: CATCTGCACAATCAGAAATCAGGACAATAAGTGCTT...CCTTTCTGAGTTGCATATTCTATTTTCTTGTCCCCAAGTAGAGACTAGTACTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp AGTAATCGCAAATACCTCATCACTGTTAATCCACTTACTAAAAATCCTTTGGGCAGAGATCTGTTTGTCTaGTTAACAGTCTGCTGCCTT +
Preference number: 4 (lower is better)
Translates to: SNRKYLITVNPLTKNPLGRDLFV*LTVCCL
Trigger: AAGGCAGCAGACTGTTAATCAGACAAACAGATCTCT...GCCCAAAGGATTTTTAGTAAGTGGATTAACAGTGATGAGGTATTTGCGATTACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR TCA 90 bp TATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCATTAATGGGTGAGATGTCTAAGTaGCTTAGTGACCTTCACACT +
Preference number: 4 (lower is better)
Translates to: YSNPQCNSYLLSIRCSLMGEMSK*LSDLHT
Trigger: AGTGTGAAGGTCACTAAGTCACTTAGACATCTCACC...CATTAATGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR TCA 90 bp CACCACTATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCATGTACATGGATTTCTTaGCCTAACATTCAAAAGGAC +
Preference number: 4 (lower is better)
Translates to: HHYSNPQCNSYLLSIRCSCTWIS*PNIQKD
Trigger: GTCCTTTTGAATGTTAGGTCAAGAAATCCATGTACA...TGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATAGTGGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR TCA 90 bp TATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCATTAATGAGTAGTCCTTGCTCCTaGCAGATTTTCAGAGGAAAC +
Preference number: 4 (lower is better)
Translates to: YSNPQCNSYLLSIRCSLMSSPCS*QIFRGN
Trigger: GTTTCCTCTGAAAATCTGTCAGGAGCAAGGACTACT...CATTAATGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR GCA 90 bp AAGGGTACTAGTCTCTTCTTGCTCTCCCTAACTAAACTATCAACAGCCAACTTGTCTTCAACAAGCAGTTaGATAATTGGCTCATGTAAA +
Preference number: 4 (lower is better)
Translates to: KGTSLFLLSLTKLSTANLSSTSS*IIGSCK
Trigger: TTTACATGAGCCAATTATGCAACTGCTTGTTGAAGA...CAAGTTGGCTGTTGATAGTTTAGTTAGGGAGAGCAAGAAGAGACTAGTACCCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394084.5
CDS-3UTR GCA 90 bp AACACTTTTTCCTCATCTTGTTTACTTTGTCTAACTCCCATTCATCACAAAGTGTTCTGGATTGACAACTaGAGGACAAATGAAGCAGGC +
Preference number: 4 (lower is better)
Translates to: NTFSSSCLLCLTPIHHKVFWIDN*RTNEAG
Trigger: GCCTGCTTCATTTGTCCTGCAGTTGTCAATCCAGAA...CACTTTGTGATGAATGGGAGTTAGACAAAGTAAACAAGATGAGGAAAAAGTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394084.5
CDS-3UTR GCA 90 bp CCAAAATCAGAGCTGCACTCAGATCTCAGGTCTTCAATCTTATTGGGAATATCCCATCAGATTAAATCGTaGTACTTCATTAATAGGAGC +
Preference number: 4 (lower is better)
Translates to: PKSELHSDLRSSILLGISHQIKS*YFINRS
Trigger: GCTCCTATTAATGAAGTAGCACGATTTAATCTGATG...GGATATTCCCAATAAGATTGAAGACCTGAGATCTGAGTGCAGCTCTGATTTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR GCA 90 bp TATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCATTAATGAAAAGGCGGCCTACCTaGATCAGATTAAATCGTGCT +
Preference number: 4 (lower is better)
Translates to: YSNPQCNSYLLSIRCSLMKRRPT*IRLNRA
Trigger: AGCACGATTTAATCTGATGCAGGTAGGCCGCCTTTT...CATTAATGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp ATCATACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATTATAAACCACAGTTCTaGTCAATCCTTCCAGAAGAT +
Preference number: 4 (lower is better)
Translates to: IIQNNLQPSKQLMHLLRDYKPQF*SILPED
Trigger: ATCTTCTGGAAGGATTGAGCAGAACTGTGGTTTATA...ATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGTATGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp TATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCATTAATGCCTCCATCCGAAAGCTaGATGTTTAGGACCTCATTT +
Preference number: 4 (lower is better)
Translates to: YSNPQCNSYLLSIRCSLMPPSES*MFRTSF
Trigger: AAATGAGGTCCTAAACATGCAGCTTTCGGATGGAGG...CATTAATGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp TATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCATTAATGATGCCTTTGCTTGAATaGCTCCATTTCAGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: YSNPQCNSYLLSIRCSLMMPLLE*LHFSWS
Trigger: ACTCCAGCTGAAATGGAGGCATTCAAGCAAAGGCAT...CATTAATGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp TATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCATTAATGCTATATCAGAGCTCCTaGTTCGAACTAGTCTCTCAG +
Preference number: 4 (lower is better)
Translates to: YSNPQCNSYLLSIRCSLMLYQSS*FELVSQ
Trigger: CTGAGAGACTAGTTCGAAGCAGGAGCTCTGATATAG...CATTAATGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp GTAGTACTAGTCTCTACTTGGGGACAAGAAAATAGAATATGCAACTCAGAAAGGTGTCTTAAGTACATCTaGATTGAGCCTCTGAATGAG +
Preference number: 4 (lower is better)
Translates to: VVLVSTWGQENRICNSERCLKYI*IEPLNE
Trigger: CTCATTCAGAGGCTCAATGCAGATGTACTTAAGACA...CCTTTCTGAGTTGCATATTCTATTTTCTTGTCCCCAAGTAGAGACTAGTACTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp GTAGTACTAGTCTCTACTTGGGGACAAGAAAATAGAATATGCAACTCAGAAAGGTTGCTTCGCAATCCATaGTGTACGATACAACTTTTC +
Preference number: 4 (lower is better)
Translates to: VVLVSTWGQENRICNSERLLRNP*CTIQLF
Trigger: GAAAAGTTGTATCGTACAGCATGGATTGCGAAGCAA...CCTTTCTGAGTTGCATATTCTATTTTCTTGTCCCCAAGTAGAGACTAGTACTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp ATCATACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATAAATTGATTCTCTGTTaGTTCGCAATCCATGCTGTA +
Preference number: 4 (lower is better)
Translates to: IIQNNLQPSKQLMHLLRDKLILC*FAIHAV
Trigger: TACAGCATGGATTGCGAAGCAACAGAGAATCAATTT...ATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGTATGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp TGCTTAACATTTACTGAATCAAAGGCTGAAGTAAATGGACTCTCATCTAGGTCTTGTACTTTCATAGTTTaGCATTGCTCCATCACTGGG +
Preference number: 4 (lower is better)
Translates to: CLTFTESKAEVNGLSSRSCTFIV*HCSITG
Trigger: CCCAGTGATGGAGCAATGGCAAACTATGAAAGTACA...AGACCTAGATGAGAGTCCATTTACTTCAGCCTTTGATTCAGTAAATGTTAAGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR GCA 90 bp ATCATACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATTTTAATGAATTCTACTaGTGCTGTGAACTGCATCCA +
Preference number: 4 (lower is better)
Translates to: IIQNNLQPSKQLMHLLRDFNEFY*CCELHP
Trigger: TGGATGCAGTTCACAGCAGCAGTAGAATTCATTAAA...ATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGTATGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp AAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTAAATGCCTGATGCTGTaGAGTATCATACAAAACAAT +
Preference number: 4 (lower is better)
Translates to: KQSSAFKAADAPSQRSVCKCLML*SIIQNN
Trigger: ATTGTTTTGTATGATACTGCACAGCATCAGGCATTT...ACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp AAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCATCCCACACTCCTATaGAATTTGTTATTTTGGTAT +
Preference number: 4 (lower is better)
Translates to: KQSSAFKAADAPSQRSVCHPTLL*NLLFWY
Trigger: ATACCAAAATAACAAATTGCATAGGAGTGTGGGATG...ACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR GCA 90 bp TGCTTAACATTTACTGAATCAAAGGCTGAAGTAAATGGACTCTCATCTAGGTCTAGAAAAGAGCCCCGATaGAATGTCCACATCTTCATA +
Preference number: 4 (lower is better)
Translates to: CLTFTESKAEVNGLSSRSRKEPR*NVHIFI
Trigger: TATGAAGATGTGGACATTGCATCGGGGCTCTTTTCT...AGACCTAGATGAGAGTCCATTTACTTCAGCCTTTGATTCAGTAAATGTTAAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR CCA 90 bp AAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTTATTTCATCCATGTCTaGACTAGTGACAGAATCTTT +
Preference number: 4 (lower is better)
Translates to: KQSSAFKAADAPSQRSVCYFIHV*TSDRIF
Trigger: AAAGATTCTGTCACTAGTCCAGACATGGATGAAATA...ACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp GCCCAAAGACGAGAGAACCTGCTTGTTAGCTCATTAACCTGTTTAGTAAAGATCTATTTCATCCATGTCTaGACTAGTGACAGAATCTTT +
Preference number: 4 (lower is better)
Translates to: AQRRENLLVSSLTCLVKIYFIHV*TSDRIF
Trigger: AAAGATTCTGTCACTAGTCCAGACATGGATGAAATA...GATCTTTACTAAACAGGTTAATGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp TTGAATGCCTCCATTTCAGCTGGAGTTAAAACATGGGAACCAAAGTTTGGCAACTATTTCATCCATGTCTaGACTAGTGACAGAATCTTT +
Preference number: 4 (lower is better)
Translates to: LNASISAGVKTWEPKFGNYFIHV*TSDRIF
Trigger: AAAGATTCTGTCACTAGTCCAGACATGGATGAAATA...GTTGCCAAACTTTGGTTCCCATGTTTTAACTCCAGCTGAAATGGAGGCATTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR CCA 90 bp TGCTTAACATTTACTGAATCAAAGGCTGAAGTAAATGGACTCTCATCTAGGTCTGCTGGAGTTAAAACATaGGAACCAAAGTTTGGCAAC +
Preference number: 4 (lower is better)
Translates to: CLTFTESKAEVNGLSSRSAGVKT*EPKFGN
Trigger: GTTGCCAAACTTTGGTTCCCATGTTTTAACTCCAGC...AGACCTAGATGAGAGTCCATTTACTTCAGCCTTTGATTCAGTAAATGTTAAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR CCA 90 bp CACCACTATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCAGAGATAAGCAATATATaGGGCTCTTTTTCTGTAGTC +
Preference number: 4 (lower is better)
Translates to: HHYSNPQCNSYLLSIRCSEISNI*GSFSVV
Trigger: GACTACAGAAAAAGAGCCCCATATATTGCTTATCTC...TGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATAGTGGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp TATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCATTAATGTTGTGCAGATGGCCATaGTGCTTCTCGAAGATAAAC +
Preference number: 4 (lower is better)
Translates to: YSNPQCNSYLLSIRCSLMLCRWP*CFSKIN
Trigger: GTTTATCTTCGAGAAGCACCATGGCCATCTGCACAA...CATTAATGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp AGTAATCGCAAATACCTCATCACTGTTAATCCACTTACTAAAAATCCTTTGGGCAGACAGCAAACAGGGTaGATTTGCCTTTATCAACAC +
Preference number: 4 (lower is better)
Translates to: SNRKYLITVNPLTKNPLGRQQTG*ICLYQH
Trigger: GTGTTGATAAAGGCAAATCCACCCTGTTTGCTGTCT...GCCCAAAGGATTTTTAGTAAGTGGATTAACAGTGATGAGGTATTTGCGATTACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR CCA 90 bp ATCATACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGCTGAATGTTTCCTaGGCTGATTTTGTACTTTTA +
Preference number: 4 (lower is better)
Translates to: IIQNNLQPSKQLMHLLRDLLNVS*ADFVLL
Trigger: TAAAAGTACAAAATCAGCCCAGGAAACATTCAGCAG...ATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGTATGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR CCA 90 bp GTAGTACTAGTCTCTACTTGGGGACAAGAAAATAGAATATGCAACTCAGAAAGGAAAATTAGCTGGGTGTaGTGGCATACACTTGTAATC +
Preference number: 4 (lower is better)
Translates to: VVLVSTWGQENRICNSERKISWV*WHTLVI
Trigger: GATTACAAGTGTATGCCACCACACCCAGCTAATTTT...CCTTTCTGAGTTGCATATTCTATTTTCTTGTCCCCAAGTAGAGACTAGTACTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR TCA 90 bp TATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCATTAATGCATGTAAAGTGGCTGTaGGGAAAAGTTTGGCAGAAA +
Preference number: 4 (lower is better)
Translates to: YSNPQCNSYLLSIRCSLMHVKWL*GKVWQK
Trigger: TTTCTGCCAAACTTTTCCTCACAGCCACTTTACATG...CATTAATGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp TATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCATTAATGCTTGAACTTTTTGCCTaGATCTATCTGAGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: YSNPQCNSYLLSIRCSLMLELFA*IYLSPS
Trigger: AGAAGGGCTCAGATAGATTCAGGCAAAAAGTTCAAG...CATTAATGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp TATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCATTAATGCTCACTCACTGTTTCTaGTATGTCCCTATCATCTGT +
Preference number: 4 (lower is better)
Translates to: YSNPQCNSYLLSIRCSLMLTHCF*YVPIIC
Trigger: ACAGATGATAGGGACATATCAGAAACAGTGAGTGAG...CATTAATGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp TGCTTAACATTTACTGAATCAAAGGCTGAAGTAAATGGACTCTCATCTAGGTCTAAGCACTTATTGTCCTaGTTTCTGATTGTGCAGATG +
Preference number: 4 (lower is better)
Translates to: CLTFTESKAEVNGLSSRSKHLLS*FLIVQM
Trigger: CATCTGCACAATCAGAAATCAGGACAATAAGTGCTT...AGACCTAGATGAGAGTCCATTTACTTCAGCCTTTGATTCAGTAAATGTTAAGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR TCA 90 bp TATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCATTAATGAGAGATCTGTTTGTCTaGTTAACAGTCTGCTGCCTT +
Preference number: 4 (lower is better)
Translates to: YSNPQCNSYLLSIRCSLMRDLFV*LTVCCL
Trigger: AAGGCAGCAGACTGTTAATCAGACAAACAGATCTCT...CATTAATGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR TCA 90 bp AGTAATCGCAAATACCTCATCACTGTTAATCCACTTACTAAAAATCCTTTGGGCTTTAAAACACCTAGTTaGCCTTACTCGGTCCAAAGT +
Preference number: 4 (lower is better)
Translates to: SNRKYLITVNPLTKNPLGFKTPS*PYSVQS
Trigger: ACTTTGGACCGAGTAAGGTCAACTAGGTGTTTTAAA...GCCCAAAGGATTTTTAGTAAGTGGATTAACAGTGATGAGGTATTTGCGATTACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR GCA 90 bp CACCACTATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCATCTTCAACAAGCAGTTaGATAATTGGCTCATGTAAA +
Preference number: 4 (lower is better)
Translates to: HHYSNPQCNSYLLSIRCSSSTSS*IIGSCK
Trigger: TTTACATGAGCCAATTATGCAACTGCTTGTTGAAGA...TGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATAGTGGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp ATCATACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCATCAGATTAAATCGTaGTACTTCATTAATAGGAGC +
Preference number: 4 (lower is better)
Translates to: IIQNNLQPSKQLMHLLRDHQIKS*YFINRS
Trigger: GCTCCTATTAATGAAGTAGCACGATTTAATCTGATG...ATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGTATGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp AGTAATCGCAAATACCTCATCACTGTTAATCCACTTACTAAAAATCCTTTGGGCGCACCTGCAATTTCTTaGAAGCGATCTTCATCAATA +
Preference number: 4 (lower is better)
Translates to: SNRKYLITVNPLTKNPLGAPAIS*KRSSSI
Trigger: TATTGATGAAGATCGCTTGCAAGAAATTGCAGGTGC...GCCCAAAGGATTTTTAGTAAGTGGATTAACAGTGATGAGGTATTTGCGATTACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR GCA 90 bp AGTAATCGCAAATACCTCATCACTGTTAATCCACTTACTAAAAATCCTTTGGGCTTGCTTCGCAATCCATaGTGTACGATACAACTTTTC +
Preference number: 4 (lower is better)
Translates to: SNRKYLITVNPLTKNPLGLLRNP*CTIQLF
Trigger: GAAAAGTTGTATCGTACAGCATGGATTGCGAAGCAA...GCCCAAAGGATTTTTAGTAAGTGGATTAACAGTGATGAGGTATTTGCGATTACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR GCA 90 bp TATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCATTAATGTGTACTTTCATAGTTTaGCATTGCTCCATCACTGGG +
Preference number: 4 (lower is better)
Translates to: YSNPQCNSYLLSIRCSLMCTFIV*HCSITG
Trigger: CCCAGTGATGGAGCAATGGCAAACTATGAAAGTACA...CATTAATGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp GTAGTACTAGTCTCTACTTGGGGACAAGAAAATAGAATATGCAACTCAGAAAGGAAGAGCTCTGTGATTTaGAGTCACTACTTTAGACAA +
Preference number: 4 (lower is better)
Translates to: VVLVSTWGQENRICNSERKSSVI*SHYFRQ
Trigger: TTGTCTAAAGTAGTGACTGCAAATCACAGAGCTCTT...CCTTTCTGAGTTGCATATTCTATTTTCTTGTCCCCAAGTAGAGACTAGTACTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp GTAGTACTAGTCTCTACTTGGGGACAAGAAAATAGAATATGCAACTCAGAAAGGTTTAATGAATTCTACTaGTGCTGTGAACTGCATCCA +
Preference number: 4 (lower is better)
Translates to: VVLVSTWGQENRICNSERFNEFY*CCELHP
Trigger: TGGATGCAGTTCACAGCAGCAGTAGAATTCATTAAA...CCTTTCTGAGTTGCATATTCTATTTTCTTGTCCCCAAGTAGAGACTAGTACTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp CACCACTATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCAAAATGCCTGATGCTGTaGAGTATCATACAAAACAAT +
Preference number: 4 (lower is better)
Translates to: HHYSNPQCNSYLLSIRCSKCLML*SIIQNN
Trigger: ATTGTTTTGTATGATACTGCACAGCATCAGGCATTT...TGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATAGTGGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp ATCATACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCATCCCACACTCCTATaGAATTTGTTATTTTGGTAT +
Preference number: 4 (lower is better)
Translates to: IIQNNLQPSKQLMHLLRDHPTLL*NLLFWY
Trigger: ATACCAAAATAACAAATTGCATAGGAGTGTGGGATG...ATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGTATGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR GCA 90 bp CACCACTATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCATTCGAAGTCTTCTGCTaGTTAACATTTACTGAATCA +
Preference number: 4 (lower is better)
Translates to: HHYSNPQCNSYLLSIRCSFEVFC*LTFTES
Trigger: TGATTCAGTAAATGTTAAGCAGCAGAAGACTTCGAA...TGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATAGTGGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR CCA 90 bp TATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCATTAATGTTTTATTTGCTGGAGTaGTTGCTGGAGATAGCTGAG +
Preference number: 4 (lower is better)
Translates to: YSNPQCNSYLLSIRCSLMFYLLE*LLEIAE
Trigger: CTCAGCTATCTCCAGCAACCACTCCAGCAAATAAAA...CATTAATGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp TGCTTAACATTTACTGAATCAAAGGCTGAAGTAAATGGACTCTCATCTAGGTCTGGTCTTCAATCTTATTaGGAATATCCTCAGAGGTTG +
Preference number: 4 (lower is better)
Translates to: CLTFTESKAEVNGLSSRSGLQSY*EYPQRL
Trigger: CAACCTCTGAGGATATTCCCAATAAGATTGAAGACC...AGACCTAGATGAGAGTCCATTTACTTCAGCCTTTGATTCAGTAAATGTTAAGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR CCA 90 bp TATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCATTAATGTCGAAGATAAACCTCTaGTATCTGAAGAGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: YSNPQCNSYLLSIRCSLMSKINL*YLKSSV
Trigger: CACAGAGCTCTTCAGATACCAGAGGTTTATCTTCGA...CATTAATGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp TGCTTAACATTTACTGAATCAAAGGCTGAAGTAAATGGACTCTCATCTAGGTCTGTAAGGAGCTCTGTCTaGGATTTCTGCAGTATATTA +
Preference number: 4 (lower is better)
Translates to: CLTFTESKAEVNGLSSRSVRSSV*DFCSIL
Trigger: TAATATACTGCAGAAATCCCAGACAGAGCTCCTTAC...AGACCTAGATGAGAGTCCATTTACTTCAGCCTTTGATTCAGTAAATGTTAAGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR TCA 90 bp TGCTTAACATTTACTGAATCAAAGGCTGAAGTAAATGGACTCTCATCTAGGTCTTGTACATGGATTTCTTaGCCTAACATTCAAAAGGAC +
Preference number: 4 (lower is better)
Translates to: CLTFTESKAEVNGLSSRSCTWIS*PNIQKD
Trigger: GTCCTTTTGAATGTTAGGTCAAGAAATCCATGTACA...AGACCTAGATGAGAGTCCATTTACTTCAGCCTTTGATTCAGTAAATGTTAAGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR TCA 90 bp TATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCATTAATGTTTAAAACACCTAGTTaGCCTTACTCGGTCCAAAGT +
Preference number: 4 (lower is better)
Translates to: YSNPQCNSYLLSIRCSLMFKTPS*PYSVQS
Trigger: ACTTTGGACCGAGTAAGGTCAACTAGGTGTTTTAAA...CATTAATGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR GCA 90 bp GTAGTACTAGTCTCTACTTGGGGACAAGAAAATAGAATATGCAACTCAGAAAGGTCTTCAACAAGCAGTTaGATAATTGGCTCATGTAAA +
Preference number: 4 (lower is better)
Translates to: VVLVSTWGQENRICNSERSSTSS*IIGSCK
Trigger: TTTACATGAGCCAATTATGCAACTGCTTGTTGAAGA...CCTTTCTGAGTTGCATATTCTATTTTCTTGTCCCCAAGTAGAGACTAGTACTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp GTAGTACTAGTCTCTACTTGGGGACAAGAAAATAGAATATGCAACTCAGAAAGGCATCAGATTAAATCGTaGTACTTCATTAATAGGAGC +
Preference number: 4 (lower is better)
Translates to: VVLVSTWGQENRICNSERHQIKS*YFINRS
Trigger: GCTCCTATTAATGAAGTAGCACGATTTAATCTGATG...CCTTTCTGAGTTGCATATTCTATTTTCTTGTCCCCAAGTAGAGACTAGTACTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp AACACTTTTTCCTCATCTTGTTTACTTTGTCTAACTCCCATTCATCACAAAGTGGAGTCATTTCTAAACTaGTACTTTTTCCTGGCTTGG +
Preference number: 4 (lower is better)
Translates to: NTFSSSCLLCLTPIHHKVESFLN*YFFLAW
Trigger: CCAAGCCAGGAAAAAGTAGCAGTTTAGAAATGACTC...CACTTTGTGATGAATGGGAGTTAGACAAAGTAAACAAGATGAGGAAAAAGTGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000394084.5
CDS-3UTR GCA 90 bp TATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCATTAATGTCGATTCTTTTTATTTaGTGGAGTGGTTGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: YSNPQCNSYLLSIRCSLMSILFI*WSGCWR
Trigger: TCTCCAGCAACCACTCCAGCAAATAAAAAGAATCGA...CATTAATGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp TATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCATTAATGGCACCTGCAATTTCTTaGAAGCGATCTTCATCAATA +
Preference number: 4 (lower is better)
Translates to: YSNPQCNSYLLSIRCSLMAPAIS*KRSSSI
Trigger: TATTGATGAAGATCGCTTGCAAGAAATTGCAGGTGC...CATTAATGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp TTTTTCCTCATCTTGTTTACTTTGTCTAACTCCCATTCATCACAAAGTGCAAACTGTCTTAAGTACATCTaGATTGAGCCTCTGAATGAG +
Preference number: 4 (lower is better)
Translates to: FFLILFTLSNSHSSQSANCLKYI*IEPLNE
Trigger: CTCATTCAGAGGCTCAATGCAGATGTACTTAAGACA...GTTTGCACTTTGTGATGAATGGGAGTTAGACAAAGTAAACAAGATGAGGAAAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394084.5
CDS-3UTR GCA 90 bp ACAATAAGACAAAGACTTGAAGAGTATGATGCCACACTCCTGTTGATACAATTCAAATTGATTCTCTGTTaGTTCGCAATCCATGCTGTA +
Preference number: 4 (lower is better)
Translates to: TIRQRLEEYDATLLLIQFKLILC*FAIHAV
Trigger: TACAGCATGGATTGCGAAGCAACAGAGAATCAATTT...GAATTGTATCAACAGGAGTGTGGCATCATACTCTTCAAGTCTTTGTCTTATTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394084.5
CDS-3UTR GCA 90 bp AGTAATCGCAAATACCTCATCACTGTTAATCCACTTACTAAAAATCCTTTGGGCTATTCTAATCCTCAGTaGAACTCATACCTTCTTTCC +
Preference number: 4 (lower is better)
Translates to: SNRKYLITVNPLTKNPLGYSNPQ*NSYLLS
Trigger: GGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATA...GCCCAAAGGATTTTTAGTAAGTGGATTAACAGTGATGAGGTATTTGCGATTACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR CCA 90 bp TATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCATTAATGCTAGCTTTGCTTCATTaGACTCCACCATTTCTTGAA +
Preference number: 4 (lower is better)
Translates to: YSNPQCNSYLLSIRCSLMLALLH*TPPFLE
Trigger: TTCAAGAAATGGTGGAGTCCAATGAAGCAAAGCTAG...CATTAATGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp GTAGTACTAGTCTCTACTTGGGGACAAGAAAATAGAATATGCAACTCAGAAAGGGTACTAGTCTCTACTTaGGGACAAGAAAATAGAATA +
Preference number: 4 (lower is better)
Translates to: VVLVSTWGQENRICNSERVLVST*GQENRI
Trigger: TATTCTATTTTCTTGTCCCCAAGTAGAGACTAGTAC...CCTTTCTGAGTTGCATATTCTATTTTCTTGTCCCCAAGTAGAGACTAGTACTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CCA 90 bp AGTAATCGCAAATACCTCATCACTGTTAATCCACTTACTAAAAATCCTTTGGGCTCCACAGTGTTAACATaGAATAGACTTAGCAACCAT +
Preference number: 4 (lower is better)
Translates to: SNRKYLITVNPLTKNPLGSTVLT*NRLSNH
Trigger: ATGGTTGCTAAGTCTATTCCATGTTAACACTGTGGA...GCCCAAAGGATTTTTAGTAAGTGGATTAACAGTGATGAGGTATTTGCGATTACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR GCA 90 bp TGCTTAACATTTACTGAATCAAAGGCTGAAGTAAATGGACTCTCATCTAGGTCTTCTTCAACAAGCAGTTaGATAATTGGCTCATGTAAA +
Preference number: 4 (lower is better)
Translates to: CLTFTESKAEVNGLSSRSSSTSS*IIGSCK
Trigger: TTTACATGAGCCAATTATGCAACTGCTTGTTGAAGA...AGACCTAGATGAGAGTCCATTTACTTCAGCCTTTGATTCAGTAAATGTTAAGCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR GCA 90 bp TATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCATTAATGAAGAGCTCTGTGATTTaGAGTCACTACTTTAGACAA +
Preference number: 4 (lower is better)
Translates to: YSNPQCNSYLLSIRCSLMKSSVI*SHYFRQ
Trigger: TTGTCTAAAGTAGTGACTGCAAATCACAGAGCTCTT...CATTAATGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp TATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCATTAATGTATTCTAATCCTCAGTaGAACTCATACCTTCTTTCC +
Preference number: 4 (lower is better)
Translates to: YSNPQCNSYLLSIRCSLMYSNPQ*NSYLLS
Trigger: GGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATA...CATTAATGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR GCA 90 bp TGCTTAACATTTACTGAATCAAAGGCTGAAGTAAATGGACTCTCATCTAGGTCTTTCGAAGTCTTCTGCTaGTTAACATTTACTGAATCA +
Preference number: 4 (lower is better)
Translates to: CLTFTESKAEVNGLSSRSFEVFC*LTFTES
Trigger: TGATTCAGTAAATGTTAAGCAGCAGAAGACTTCGAA...AGACCTAGATGAGAGTCCATTTACTTCAGCCTTTGATTCAGTAAATGTTAAGCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS GCA 90 bp GGCCTCGGAGCCGTCGCCCTAGCCGGTGACTGCCCCCGCCGCCGCTaGCGCCACCTTCGCCACTCGCCTGTTGGCTTCCCTGCGTCCTGC +
Preference number: 5 (lower is better)
Translates to: GLGAVALAGDCPRRR*RHLRHSPVGFPASC
Trigger: GCAGGACGCAGGGAAGCCAACAGGCGAGTGGCGAAGGTGGCGGCAGCGGCGGCGGGGGCAGTCACCGGCTAGGGCGACGGCTCCGAGGCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000461379.5
ENST00000497580.5
CDS-3UTR CAA 90 bp TGGCTGCAGCTGGAGGGAGTTCTCGCTCTTCATTTCCTGGACGCCGGTTCCAGCCTACTTTTTCCTGGCTaGGCCGGGGGTAGGTTTGCC +
Preference number: 5 (lower is better)
Translates to: WLQLEGVLALHFLDAGSSLLFPG*AGGRFA
Trigger: GGCAAACCTACCCCCGGCCAAGCCAGGAAAAAGTAG...GCTGGAACCGGCGTCCAGGAAATGAAGAGCGAGAACTCCCTCCAGCTGCAGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR CAA 90 bp TCCTGGACGCCGGTTCCAGCTGGGGTCACTCATGGGTCTCCGGACAGAAGATACCCAAAGCCACTAGCTTaGCTTCATTGGACTCCACCA +
Preference number: 5 (lower is better)
Translates to: SWTPVPAGVTHGSPDRRYPKPLA*LHWTPP
Trigger: TGGTGGAGTCCAATGAAGCAAAGCTAGTGGCTTTGG...GTATCTTCTGTCCGGAGACCCATGAGTGACCCCAGCTGGAACCGGCGTCCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR CAA 90 bp TGGATGCGATGGCCTAGCATAGTGAACCTTTGGCCTTACCACAGCAGAAGCCCCCTACTTTTTCCTGGCTaGGCCGGGGGTAGGTTTGCC +
Preference number: 5 (lower is better)
Translates to: WMRWPSIVNLWPYHSRSPLLFPG*AGGRFA
Trigger: GGCAAACCTACCCCCGGCCAAGCCAGGAAAAAGTAG...GGGGCTTCTGCTGTGGTAAGGCCAAAGGTTCACTATGCTAGGCCATCGCATCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR CAA 90 bp GCAGAGACTCTGACTGAGAAGGAGGAGAGGTCAGCTGGTGGGCACCGTGAGTTAGGGCCTCTGAGTCACTaGGCAATACCTCTACACTCC +
Preference number: 5 (lower is better)
Translates to: AETLTEKEERSAGGHRELGPLSH*AIPLHS
Trigger: GGAGTGTAGAGGTATTGCCAAGTGACTCAGAGGCCC...TAACTCACGGTGCCCACCAGCTGACCTCTCCTCCTTCTCAGTCAGAGTCTCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS TCA 90 bp GGAGGAGAGGTCAGCTGGTGGGCACCTAAAACAGGAGGGAAACTGTaGGACCAAGCCAGGACGCAGGACAGACGGTCTCAACACAGTTTA +
Preference number: 5 (lower is better)
Translates to: GGEVSWWAPKTGGKL*DQARTQDRRSQHSL
Trigger: TAAACTGTGTTGAGACCGTCTGTCCTGCGTCCTGGCTTGGTCTCACAGTTTCCCTCCTGTTTTAGGTGCCCACCAGCTGACCTCTCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479511.1
CDS-3UTR CAA 90 bp GCCCCCGTATTGGGGCTGAGATTGTTCTCTTGCTCACGCACCTCAGGGACACATTTCCAAGGCTGCTCTTaGTTCGGGGATCTCCCTCTT +
Preference number: 5 (lower is better)
Translates to: APVLGLRLFSCSRTSGTHFQGCS*FGDLPL
Trigger: AAGAGGGAGATCCCCGAACAAAGAGCAGCCTTGGAA...ATGTGTCCCTGAGGTGCGTGAGCAAGAGAACAATCTCAGCCCCAATACGGGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR CAA 90 bp AGTTCTCGCTCTTCATTTCCTGGACGCCGGTTCCAGCTGGGGTCACTCATGGGTAACAGGGACATCTCCTaGTCCTCCATCCGAAAGCTG +
Preference number: 5 (lower is better)
Translates to: SSRSSFPGRRFQLGSLMGNRDIS*SSIRKL
Trigger: CAGCTTTCGGATGGAGGACAAGGAGATGTCCCTGTT...ACCCATGAGTGACCCCAGCTGGAACCGGCGTCCAGGAAATGAAGAGCGAGAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR CAA 90 bp GATGCACCTTCTCAGAGATCTGTTTGTCTGATTAACAGTCTGCTGCCTTGGTGGCTGCGGGTGGGCTGCTaGGCTTGCAGAGTCTGGGAG +
Preference number: 5 (lower is better)
Translates to: DAPSQRSVCLINSLLPWWLRVGC*ACRVWE
Trigger: CTCCCAGACTCTGCAAGCCAAGCAGCCCACCCGCAG...CCACCAAGGCAGCAGACTGTTAATCAGACAAACAGATCTCTGAGAAGGTGCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp GCTTTGGTGTGCCTCCATGGCCAATTTTTCAGGCACCAAAACCCATTCCTGATTCTGCGGGTGGGCTGCTaGGCTTGCAGAGTCTGGGAG +
Preference number: 5 (lower is better)
Translates to: ALVCLHGQFFRHQNPFLILRVGC*ACRVWE
Trigger: CTCCCAGACTCTGCAAGCCAAGCAGCCCACCCGCAG...AATCAGGAATGGGTTTTGGTGCCTGAAAAATTGGCCATGGAGGCACACCAAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR CAA 90 bp GCCCCCGTATTGGGGCTGAGATTGTTCTCTTGCTCACGCACCTCAGGGACACATCTTGTGCTTGAAGCTTaGGTGTGCCTCCATGGCCAA +
Preference number: 5 (lower is better)
Translates to: APVLGLRLFSCSRTSGTHLVLEA*VCLHGQ
Trigger: TTGGCCATGGAGGCACACCAAAGCTTCAAGCACAAG...ATGTGTCCCTGAGGTGCGTGAGCAAGAGAACAATCTCAGCCCCAATACGGGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS GCA 90 bp CGTATCATCAGATGTGCTACCCAGTCCAGAACGCTCTCCAGTTCTTaGAGACGCTCCTCCTGCTTTAGGTCTGGGGCCTCTGAGTCACTT +
Preference number: 5 (lower is better)
Translates to: RIIRCATQSRTLSSS*RRSSCFRSGASESL
Trigger: AAGTGACTCAGAGGCCCCAGACCTAAAGCAGGAGGAGCGTCTGCAAGAACTGGAGAGCGTTCTGGACTGGGTAGCACATCTGATGATACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265956.8
CDS-3UTR CAA 90 bp GCCCCCGTATTGGGGCTGAGATTGTTCTCTTGCTCACGCACCTCAGGGACACATCATGGGAACCAAAGTTaGGCAACCTGGCCTCATTTC +
Preference number: 5 (lower is better)
Translates to: APVLGLRLFSCSRTSGTHHGNQS*ATWPHF
Trigger: GAAATGAGGCCAGGTTGCCAAACTTTGGTTCCCATG...ATGTGTCCCTGAGGTGCGTGAGCAAGAGAACAATCTCAGCCCCAATACGGGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR CAA 90 bp TCCTCCGCCAGCTATGGAGTCATGAGCACCCGAACCCATTTCACAGGTGTCACAGTATTGGGGCTGAGATaGTTCTCTTGCTCACGCACC +
Preference number: 5 (lower is better)
Translates to: SSASYGVMSTRTHFTGVTVLGLR*FSCSRT
Trigger: GGTGCGTGAGCAAGAGAACAATCTCAGCCCCAATAC...TGTGACACCTGTGAAATGGGTTCGGGTGCTCATGACTCCATAGCTGGCGGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS GCA 90 bp CAATCCTTCCAGAAGATTGACGGAAGACAATGGAGGGGTCTCCACTaGACGGCCCCCAATCACAACATCAAGGAAAGCGGCAACACAGCT +
Preference number: 5 (lower is better)
Translates to: QSFQKIDGRQWRGLH*TAPNHNIKESGNTA
Trigger: AGCTGTGTTGCCGCTTTCCTTGATGTTGTGATTGGGGGCCGTGCAGTGGAGACCCCTCCATTGTCTTCCGTCAATCTTCTGGAAGGATTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000265956.8
ENST00000297933.11
ENST00000312123.13
ENST00000394083.6
ENST00000394084.5
ENST00000394104.6
ENST00000394105.6
ENST00000431329.5
ENST00000436712.2
ENST00000467750.5
ENST00000470056.5
ENST00000495955.5
ENST00000497580.5
CDS GCA 90 bp GTATCATCAGATGTGCTACCCAGTCCAGAACAGCTCTCCAGTTCTTaGAGACGCTCCTCCTGCTTTAGGTCTGGGGCCTCTGAGTCACTT +
Preference number: 5 (lower is better)
Translates to: VSSDVLPSPEQLSSS*RRSSCFRSGASESL
Trigger: AAGTGACTCAGAGGCCCCAGACCTAAAGCAGGAGGAGCGTCTGCAAGAACTGGAGAGCTGTTCTGGACTGGGTAGCACATCTGATGATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000297933.11
ENST00000312123.13
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000431329.5
ENST00000436712.2
ENST00000467750.5
ENST00000470056.5
ENST00000495955.5
ENST00000497580.5
CDS GCA 90 bp GCTGCTTGGCTTGCAGAGTCTGGGAGATCATCAGCCGAGATGTTCTaGAGTGCTTCGTCACGGGGAGAATCATGTGCACTTTCACCATCA +
Preference number: 5 (lower is better)
Translates to: AAWLAESGRSSAEMF*SASSRGESCALSPS
Trigger: TGATGGTGAAAGTGCACATGATTCTCCCCGTGACGAAGCACTGCAGAACATCTCGGCTGATGATCTCCCAGACTCTGCAAGCCAAGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000297933.11
ENST00000312123.13
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000474637.5
ENST00000495955.5
CDS CCA 90 bp TGGGGGATCTGGTGGTGGATGCGATGGCCTAGCATAGTGAACCTTTaGCCTTACCACAGCAGAAGCCCCGTGAGTTATTTCATCCATGTC +
Preference number: 5 (lower is better)
Translates to: WGIWWWMRWPSIVNL*PYHSRSPVSYFIHV
Trigger: GACATGGATGAAATAACTCACGGGGCTTCTGCTGTGGTAAGGCCAAAGGTTCACTATGCTAGGCCATCGCATCCACCACCAGATCCCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000431329.5
CDS-3UTR CAA 90 bp GAGACTCTGACTGAGAAGGAGGAGAGGTCAGCTGGTGGGCACCGTGAGTTATTTTTCCAAGGCTGCTCTTaGTTCGGGGATCTCCCTCTT +
Preference number: 5 (lower is better)
Translates to: ETLTEKEERSAGGHRELFFQGCS*FGDLPL
Trigger: AAGAGGGAGATCCCCGAACAAAGAGCAGCCTTGGAA...AAATAACTCACGGTGCCCACCAGCTGACCTCTCCTCCTTCTCAGTCAGAGTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR CAA 90 bp CAGCTGGGGTCACTCATGGGTCTCCGGACAGAAGATACTATATCAGAGCTCCTGAACAGGGACATCTCCTaGTCCTCCATCCGAAAGCTG +
Preference number: 5 (lower is better)
Translates to: QLGSLMGLRTEDTISELLNRDIS*SSIRKL
Trigger: CAGCTTTCGGATGGAGGACAAGGAGATGTCCCTGTT...CAGGAGCTCTGATATAGTATCTTCTGTCCGGAGACCCATGAGTGACCCCAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR CAA 90 bp TCCTCCGCCAGCTATGGAGTCATGAGCACCCGAACCCATTTCACAGGTGTCACAGTGGTAAAGTATCGATaGGCCACTTCTTTGTCCCGC +
Preference number: 5 (lower is better)
Translates to: SSASYGVMSTRTHFTGVTVVKYR*ATSLSR
Trigger: GCGGGACAAAGAAGTGGCCAATCGATACTTTACCAC...TGTGACACCTGTGAAATGGGTTCGGGTGCTCATGACTCCATAGCTGGCGGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR CAA 90 bp GATGCACCTTCTCAGAGATCTGTTTGTCTGATTAACAGTCTGCTGCCTTGGTGGGGGACAGAGTCCTCATaGGCCAGGCTCAGGAGGTTC +
Preference number: 5 (lower is better)
Translates to: DAPSQRSVCLINSLLPWWGTESS*ARLRRF
Trigger: GAACCTCCTGAGCCTGGCCAATGAGGACTCTGTCCC...CCACCAAGGCAGCAGACTGTTAATCAGACAAACAGATCTCTGAGAAGGTGCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS GCA 90 bp AACTGCAGGACAAATGAAGCAGGCCAACAGGAGATCAGTACACATTaGCCTGACCTCCCCAACTTCCAGCCTATCTACACAGGAGAGGGT +
Preference number: 5 (lower is better)
Translates to: NCRTNEAGQQEISTH*PDLPNFQPIYTGEG
Trigger: ACCCTCTCCTGTGTAGATAGGCTGGAAGTTGGGGAGGTCAGGGCAATGTGTACTGATCTCCTGTTGGCCTGCTTCATTTGTCCTGCAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000265956.8
ENST00000297933.11
ENST00000312123.13
ENST00000394083.6
ENST00000394084.5
ENST00000394104.6
ENST00000394105.6
ENST00000431329.5
ENST00000436712.2
ENST00000467750.5
ENST00000470056.5
ENST00000495955.5
ENST00000497580.5
CDS GCA 90 bp TTCACCATCTTCAATGTGGGAAAGGCTCAAAGGCTGATCACTGAATaGCAGCTACTTGGGAGGGTCAGATGGGAGGATCGCTTGAACCCG +
Preference number: 5 (lower is better)
Translates to: FTIFNVGKAQRLITE*QLLGRVRWEDRLNP
Trigger: CGGGTTCAAGCGATCCTCCCATCTGACCCTCCCAAGTAGCTGGCATTCAGTGATCAGCCTTTGAGCCTTTCCCACATTGAAGATGGTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297933.11
ENST00000394084.5
ENST00000467750.5
ENST00000495955.5
CDS GCA 90 bp TTGGCTTGCAGAGTCTGGGAGATCATCAGCCGAGATGTTCTGCAGTaGTTCGTCACGGGGAGAATCATGTGCACTTTCACCATCACCCAT +
Preference number: 5 (lower is better)
Translates to: LACRVWEIISRDVLQ*FVTGRIMCTFTITH
Trigger: ATGGGTGATGGTGAAAGTGCACATGATTCTCCCCGTGACGAAGCACTGCAGAACATCTCGGCTGATGATCTCCCAGACTCTGCAAGCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000297933.11
ENST00000312123.13
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000474637.5
ENST00000495955.5
CDS-3UTR CAA 90 bp TCCTGGACGCCGGTTCCAGCTGGGGTCACTCATGGGTCTCCGGACAGAAGATACGTAGCTTTCATCTTCTaGCATGATGCAATTGCCATA +
Preference number: 5 (lower is better)
Translates to: SWTPVPAGVTHGSPDRRYVAFIF*HDAIAI
Trigger: TATGGCAATTGCATCATGCAAGAAGATGAAAGCTAC...GTATCTTCTGTCCGGAGACCCATGAGTGACCCCAGCTGGAACCGGCGTCCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR CAA 90 bp TCCTCCGCCAGCTATGGAGTCATGAGCACCCGAACCCATTTCACAGGTGTCACAAATCCTTCCAGAAGATaGACGGAAGACAATGGAGGG +
Preference number: 5 (lower is better)
Translates to: SSASYGVMSTRTHFTGVTNPSRR*TEDNGG
Trigger: CCCTCCATTGTCTTCCGTCAATCTTCTGGAAGGATT...TGTGACACCTGTGAAATGGGTTCGGGTGCTCATGACTCCATAGCTGGCGGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR CAA 90 bp CAGCTGGGGTCACTCATGGGTCTCCGGACAGAAGATACTATATCAGAGCTCCTGCAACACCTCTTCTGGTaGCACCTCCTGAATGGTTTC +
Preference number: 5 (lower is better)
Translates to: QLGSLMGLRTEDTISELLQHLFW*HLLNGF
Trigger: GAAACCATTCAGGAGGTGCAACCAGAAGAGGTGTTG...CAGGAGCTCTGATATAGTATCTTCTGTCCGGAGACCCATGAGTGACCCCAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR CAA 90 bp TCCAGCTGGGGTCACTCATGGGTCTCCGGACAGAAGATACTATATCAGAGCTCCCATGGGAACCAAAGTTaGGCAACCTGGCCTCATTTC +
Preference number: 5 (lower is better)
Translates to: SSWGHSWVSGQKILYQSSHGNQS*ATWPHF
Trigger: GAAATGAGGCCAGGTTGCCAAACTTTGGTTCCCATG...GGAGCTCTGATATAGTATCTTCTGTCCGGAGACCCATGAGTGACCCCAGCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR CAA 90 bp GCAGAGACTCTGACTGAGAAGGAGGAGAGGTCAGCTGGTGGGCACCGTGAGTTATCATCATCGCTATCTTaGCGTTCTTCAGTCTCTCCT +
Preference number: 5 (lower is better)
Translates to: AETLTEKEERSAGGHRELSSSLS*RSSVSP
Trigger: AGGAGAGACTGAAGAACGCAAAGATAGCGATGATGA...TAACTCACGGTGCCCACCAGCTGACCTCTCCTCCTTCTCAGTCAGAGTCTCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR CAA 90 bp GCTTTGGTGTGCCTCCATGGCCAATTTTTCAGGCACCAAAACCCATTCCTGATTCTCAGCCACCTGAGCTaGTGCACTGAGTCTAGGGCT +
Preference number: 5 (lower is better)
Translates to: ALVCLHGQFFRHQNPFLILSHLS*CTESRA
Trigger: AGCCCTAGACTCAGTGCACAAGCTCAGGTGGCTGAG...AATCAGGAATGGGTTTTGGTGCCTGAAAAATTGGCCATGGAGGCACACCAAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR CAA 90 bp ACACACGAAGTGAAACCAGACAGTGATGGCCCATGTACAAGACTTGTGCTTGAAGGGACAGAGTCCTCATaGGCCAGGCTCAGGAGGTTC +
Preference number: 5 (lower is better)
Translates to: THEVKPDSDGPCTRLVLEGTESS*ARLRRF
Trigger: GAACCTCCTGAGCCTGGCCAATGAGGACTCTGTCCC...TTCAAGCACAAGTCTTGTACATGGGCCATCACTGTCTGGTTTCACTTCGTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS TCA 90 bp AAAATCCGGTTCATCACGCTTCGCTCAATGGCCAGCTGTGCATCTTaGAGCTGTTCTTCACTCGCGTTTTGCCATATGACATCCTGGGCC +
Preference number: 5 (lower is better)
Translates to: KIRFITLRSMASCAS*SCSSLAFCHMTSWA
Trigger: GGCCCAGGATGTCATATGGCAAAACGCGAGTGAAGAACAGCTTCAAGATGCACAGCTGGCCATTGAGCGAAGCGTGATGAACCGGATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000297933.11
ENST00000312123.13
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000467707.1
ENST00000470056.5
ENST00000474637.5
ENST00000495955.5
CDS CCA 90 bp AACCACAGTTCTGCTCAATCCTTCCAGAAGATTGACGGAAGACAATaGAGGGGTCTCCACTGCACGGCCCCCAATCACAACATCAAGGAA +
Preference number: 5 (lower is better)
Translates to: NHSSAQSFQKIDGRQ*RGLHCTAPNHNIKE
Trigger: TTCCTTGATGTTGTGATTGGGGGCCGTGCAGTGGAGACCCCTCCATTGTCTTCCGTCAATCTTCTGGAAGGATTGAGCAGAACTGTGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000265956.8
ENST00000297933.11
ENST00000312123.13
ENST00000394083.6
ENST00000394084.5
ENST00000394104.6
ENST00000394105.6
ENST00000431329.5
ENST00000436712.2
ENST00000467750.5
ENST00000470056.5
ENST00000495955.5
ENST00000497580.5
CDS CCA 90 bp TTGTCTTCTGGGTCTGTGTGGTCTGGTAAACCATTCCTTGTTGAATaGGTCAGCACTGGGAAGGCAACAGAGTCCGCAGAGCAAAGAGCA +
Preference number: 5 (lower is better)
Translates to: LSSGSVWSGKPFLVE*VSTGKATESAEQRA
Trigger: TGCTCTTTGCTCTGCGGACTCTGTTGCCTTCCCAGTGCTGACCCATTCAACAAGGAATGGTTTACCAGACCACACAGACCCAGAAGACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000297933.11
ENST00000312123.13
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000474637.5
ENST00000495955.5
CDS-3UTR CAA 90 bp ACAAAGTGCAAACAGACTTCACCTGCTCCAAGATCTTCTCCTGATACCACTACCCTACTTTTTCCTGGCTaGGCCGGGGGTAGGTTTGCC +
Preference number: 5 (lower is better)
Translates to: TKCKQTSPAPRSSPDTTTLLFPG*AGGRFA
Trigger: GGCAAACCTACCCCCGGCCAAGCCAGGAAAAAGTAG...GGTAGTGGTATCAGGAGAAGATCTTGGAGCAGGTGAAGTCTGTTTGCACTTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000394084.5
CDS-3UTR CAA 90 bp GATGCACCTTCTCAGAGATCTGTTTGTCTGATTAACAGTCTGCTGCCTTGGTGGGGGCCTCTGAGTCACTaGGCAATACCTCTACACTCC +
Preference number: 5 (lower is better)
Translates to: DAPSQRSVCLINSLLPWWGPLSH*AIPLHS
Trigger: GGAGTGTAGAGGTATTGCCAAGTGACTCAGAGGCCC...CCACCAAGGCAGCAGACTGTTAATCAGACAAACAGATCTCTGAGAAGGTGCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp ATGCAACTCAGAAAGGAAAGAGCCCAAAGACGAGAGAACCTGCTTGTTAGCTCACTCAGCCACCTGAGCTaGTGCACTGAGTCTAGGGCT +
Preference number: 5 (lower is better)
Translates to: MQLRKERAQRRENLLVSSLSHLS*CTESRA
Trigger: AGCCCTAGACTCAGTGCACAAGCTCAGGTGGCTGAG...TGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGCTCTTTCCTTTCTGAGTTGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp CACCACTATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCACTGCGGGTGGGCTGCTaGGCTTGCAGAGTCTGGGAG +
Preference number: 5 (lower is better)
Translates to: HHYSNPQCNSYLLSIRCSLRVGC*ACRVWE
Trigger: CTCCCAGACTCTGCAAGCCAAGCAGCCCACCCGCAG...TGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATAGTGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp GCTTTGGTGTGCCTCCATGGCCAATTTTTCAGGCACCAAAACCCATTCCTGATTGGCCAGCTGTGCATCTaGAAGCTGTTCTTCACTCGC +
Preference number: 5 (lower is better)
Translates to: ALVCLHGQFFRHQNPFLIGQLCI*KLFFTR
Trigger: GCGAGTGAAGAACAGCTTCAAGATGCACAGCTGGCC...AATCAGGAATGGGTTTTGGTGCCTGAAAAATTGGCCATGGAGGCACACCAAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR CAA 90 bp TCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCTGATTGGGACAGAGTCCTCATaGGCCAGGCTCAGGAGGTTC +
Preference number: 5 (lower is better)
Translates to: SSAFKAADAPSQRSVCLIGTESS*ARLRRF
Trigger: GAACCTCCTGAGCCTGGCCAATGAGGACTCTGTCCC...AATCAGACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp GCTTTGGTGTGCCTCCATGGCCAATTTTTCAGGCACCAAAACCCATTCCTGATTTGGTGGGCCTTGGTCTaGGTCACTTTCGGTCATCGA +
Preference number: 5 (lower is better)
Translates to: ALVCLHGQFFRHQNPFLIWWALV*VTFGHR
Trigger: TCGATGACCGAAAGTGACCAAGACCAAGGCCCACCA...AATCAGGAATGGGTTTTGGTGCCTGAAAAATTGGCCATGGAGGCACACCAAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR CAA 90 bp GATGCACCTTCTCAGAGATCTGTTTGTCTGATTAACAGTCTGCTGCCTTGGTGGTGGTGGGCCTTGGTCTaGGTCACTTTCGGTCATCGA +
Preference number: 5 (lower is better)
Translates to: DAPSQRSVCLINSLLPWWWWALV*VTFGHR
Trigger: TCGATGACCGAAAGTGACCAAGACCAAGGCCCACCA...CCACCAAGGCAGCAGACTGTTAATCAGACAAACAGATCTCTGAGAAGGTGCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp GCCCCCGTATTGGGGCTGAGATTGTTCTCTTGCTCACGCACCTCAGGGACACATTGGAGGAAGAAACATTaGGGGAACAACTATTCCTCT +
Preference number: 5 (lower is better)
Translates to: APVLGLRLFSCSRTSGTHWRKKH*GNNYSS
Trigger: AGAGGAATAGTTGTTCCCCAAATGTTTCTTCCTCCA...ATGTGTCCCTGAGGTGCGTGAGCAAGAGAACAATCTCAGCCCCAATACGGGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR CAA 90 bp GCTTTGGTGTGCCTCCATGGCCAATTTTTCAGGCACCAAAACCCATTCCTGATTGCTGAGATTGTTCTCTaGCTCACGCACCTCAGGGAC +
Preference number: 5 (lower is better)
Translates to: ALVCLHGQFFRHQNPFLIAEIVL*LTHLRD
Trigger: GTCCCTGAGGTGCGTGAGCAAGAGAACAATCTCAGC...AATCAGGAATGGGTTTTGGTGCCTGAAAAATTGGCCATGGAGGCACACCAAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR CAA 90 bp GCCCCCGTATTGGGGCTGAGATTGTTCTCTTGCTCACGCACCTCAGGGACACATCAGGAGAGTATTAATTaGACAGAGGTGAATTCCCCT +
Preference number: 5 (lower is better)
Translates to: APVLGLRLFSCSRTSGTHQESIN*TEVNSP
Trigger: AGGGGAATTCACCTCTGTCAAATTAATACTCTCCTG...ATGTGTCCCTGAGGTGCGTGAGCAAGAGAACAATCTCAGCCCCAATACGGGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS TCA 90 bp CAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCTaGTTAACAGTCTGCTGCCTTGGTGGGCCTTGGTCTTGGTCACTT +
Preference number: 5 (lower is better)
Translates to: QPSKQLMHLLRDLFV*LTVCCLGGPWSWSL
Trigger: AAGTGACCAAGACCAAGGCCCACCAAGGCAGCAGACTGTTAATCAGACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000474637.5
ENST00000495955.5
CDS CCA 90 bp CTCTCCCCAGAGTTCCTGAGTGCCACCGTGCTGAGAAGAGGCCTTTaGAATAAGTTTCTAGCTTTACTCCTGGATGCTCTCTTCTTTCAG +
Preference number: 5 (lower is better)
Translates to: LSPEFLSATVLRRGL*NKFLALLLDALFFQ
Trigger: CTGAAAGAAGAGAGCATCCAGGAGTAAAGCTAGAAACTTATTCCAAAGGCCTCTTCTCAGCACGGTGGCACTCAGGAACTCTGGGGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469498.1
CDS-3UTR CAA 90 bp GCCCCCGTATTGGGGCTGAGATTGTTCTCTTGCTCACGCACCTCAGGGACACATGTAGCTTTCATCTTCTaGCATGATGCAATTGCCATA +
Preference number: 5 (lower is better)
Translates to: APVLGLRLFSCSRTSGTHVAFIF*HDAIAI
Trigger: TATGGCAATTGCATCATGCAAGAAGATGAAAGCTAC...ATGTGTCCCTGAGGTGCGTGAGCAAGAGAACAATCTCAGCCCCAATACGGGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR CAA 90 bp GCAGAGACTCTGACTGAGAAGGAGGAGAGGTCAGCTGGTGGGCACCGTGAGTTATCTCAATTAGCTTGTTaGGATCTGTTTCCAGGTGAT +
Preference number: 5 (lower is better)
Translates to: AETLTEKEERSAGGHRELSQLAC*DLFPGD
Trigger: ATCACCTGGAAACAGATCCAAACAAGCTAATTGAGA...TAACTCACGGTGCCCACCAGCTGACCTCTCCTCCTTCTCAGTCAGAGTCTCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR CAA 90 bp TGTATCCAGTGTCTATCACAGTGCCTCATGTGCAAGACACATCCACTCTCACAGTTCCAAGGCTGCTCTTaGTTCGGGGATCTCCCTCTT +
Preference number: 5 (lower is better)
Translates to: CIQCLSQCLMCKTHPLSQFQGCS*FGDLPL
Trigger: AAGAGGGAGATCCCCGAACAAAGAGCAGCCTTGGAA...CTGTGAGAGTGGATGTGTCTTGCACATGAGGCACTGTGATAGACACTGGATACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394084.5
CDS-3UTR CAA 90 bp TCTCTCCTCTTGAGGAGTCCTTACTCGGGGATGAAGATGATGAATGAGGTGCAGTGGCCGGGGGTAGGTTaGCCAATAAATTGTCAAGAG +
Preference number: 5 (lower is better)
Translates to: SLLLRSPYSGMKMMNEVQWPGVG*PINCQE
Trigger: CTCTTGACAATTTATTGGCAAACCTACCCCCGGCCA...CTGCACCTCATTCATCATCTTCATCCCCGAGTAAGGACTCCTCAAGAGGAGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR CAA 90 bp TCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCTGATTCTACTTTTTCCTGGCTaGGCCGGGGGTAGGTTTGCC +
Preference number: 5 (lower is better)
Translates to: SSAFKAADAPSQRSVCLILLFPG*AGGRFA
Trigger: GGCAAACCTACCCCCGGCCAAGCCAGGAAAAAGTAG...AATCAGACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp GATGCACCTTCTCAGAGATCTGTTTGTCTGATTAACAGTCTGCTGCCTTGGTGGAACAGGGACATCTCCTaGTCCTCCATCCGAAAGCTG +
Preference number: 5 (lower is better)
Translates to: DAPSQRSVCLINSLLPWWNRDIS*SSIRKL
Trigger: CAGCTTTCGGATGGAGGACAAGGAGATGTCCCTGTT...CCACCAAGGCAGCAGACTGTTAATCAGACAAACAGATCTCTGAGAAGGTGCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp ATGCAACTCAGAAAGGAAAGAGCCCAAAGACGAGAGAACCTGCTTGTTAGCTCACTTCAGTCTCTCCTCTaGAGGAGTCCTTACTCGGGG +
Preference number: 5 (lower is better)
Translates to: MQLRKERAQRRENLLVSSLQSLL*RSPYSG
Trigger: CCCCGAGTAAGGACTCCTCAAGAGGAGAGACTGAAG...TGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGCTCTTTCCTTTCTGAGTTGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp GCCCAAAGACGAGAGAACCTGCTTGTTAGCTCATTAACCTGTTTAGTAAAGATCGGGACAGAGTCCTCATaGGCCAGGCTCAGGAGGTTC +
Preference number: 5 (lower is better)
Translates to: AQRRENLLVSSLTCLVKIGTESS*ARLRRF
Trigger: GAACCTCCTGAGCCTGGCCAATGAGGACTCTGTCCC...GATCTTTACTAAACAGGTTAATGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp ACACACGAAGTGAAACCAGACAGTGATGGCCCATGTACAAGACTTGTGCTTGAATGGTGGGCCTTGGTCTaGGTCACTTTCGGTCATCGA +
Preference number: 5 (lower is better)
Translates to: THEVKPDSDGPCTRLVLEWWALV*VTFGHR
Trigger: TCGATGACCGAAAGTGACCAAGACCAAGGCCCACCA...TTCAAGCACAAGTCTTGTACATGGGCCATCACTGTCTGGTTTCACTTCGTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR CAA 90 bp TCCTCCGCCAGCTATGGAGTCATGAGCACCCGAACCCATTTCACAGGTGTCACAAACCATGCAGCACATTaGCAATCCCTTAGAAAACCT +
Preference number: 5 (lower is better)
Translates to: SSASYGVMSTRTHFTGVTNHAAH*QSLRKP
Trigger: AGGTTTTCTAAGGGATTGCAAATGTGCTGCATGGTT...TGTGACACCTGTGAAATGGGTTCGGGTGCTCATGACTCCATAGCTGGCGGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR CAA 90 bp GATGCACCTTCTCAGAGATCTGTTTGTCTGATTAACAGTCTGCTGCCTTGGTGGGTATTGGGGCTGAGATaGTTCTCTTGCTCACGCACC +
Preference number: 5 (lower is better)
Translates to: DAPSQRSVCLINSLLPWWVLGLR*FSCSRT
Trigger: GGTGCGTGAGCAAGAGAACAATCTCAGCCCCAATAC...CCACCAAGGCAGCAGACTGTTAATCAGACAAACAGATCTCTGAGAAGGTGCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR CAA 90 bp GATGCACCTTCTCAGAGATCTGTTTGTCTGATTAACAGTCTGCTGCCTTGGTGGAACACAGCCCCCGTATaGGGGCTGAGATTGTTCTCT +
Preference number: 5 (lower is better)
Translates to: DAPSQRSVCLINSLLPWWNTAPV*GLRLFS
Trigger: AGAGAACAATCTCAGCCCCAATACGGGGGCTGTGTT...CCACCAAGGCAGCAGACTGTTAATCAGACAAACAGATCTCTGAGAAGGTGCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS TCA 90 bp TGTAGGTTATATAAACCACAGTTCTGCTCAATCCTTCCAGAAGATTaGCGGAAGACAATGGAGGGGTCTCCACTGCACGGCCCCCAATCA +
Preference number: 5 (lower is better)
Translates to: CRLYKPQFCSILPED*RKTMEGSPLHGPQS
Trigger: TGATTGGGGGCCGTGCAGTGGAGACCCCTCCATTGTCTTCCGTCAATCTTCTGGAAGGATTGAGCAGAACTGTGGTTTATATAACCTACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000265956.8
ENST00000297933.11
ENST00000312123.13
ENST00000394083.6
ENST00000394084.5
ENST00000394104.6
ENST00000394105.6
ENST00000431329.5
ENST00000436712.2
ENST00000467750.5
ENST00000470056.5
ENST00000495955.5
ENST00000497580.5
CDS GCA 90 bp GAGCTTGAAAATCCGGTTCATCACGCTTCGCTCAATGGCCAGCTGTaGATCTTGAAGCTGTTCTTCACTCGCGTTTTGCCATATGACATC +
Preference number: 5 (lower is better)
Translates to: ELENPVHHASLNGQL*ILKLFFTRVLPYDI
Trigger: GATGTCATATGGCAAAACGCGAGTGAAGAACAGCTTCAAGATGCACAGCTGGCCATTGAGCGAAGCGTGATGAACCGGATTTTCAAGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000297933.11
ENST00000312123.13
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000467707.1
ENST00000470056.5
ENST00000474637.5
ENST00000495955.5
CDS-3UTR CAA 90 bp TCCAGCTGGGGTCACTCATGGGTCTCCGGACAGAAGATACTATATCAGAGCTCCAACCTCTCAATTAGCTaGTTTGGATCTGTTTCCAGG +
Preference number: 5 (lower is better)
Translates to: SSWGHSWVSGQKILYQSSNLSIS*FGSVSR
Trigger: CCTGGAAACAGATCCAAACAAGCTAATTGAGAGGTT...GGAGCTCTGATATAGTATCTTCTGTCCGGAGACCCATGAGTGACCCCAGCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR CAA 90 bp GATGCACCTTCTCAGAGATCTGTTTGTCTGATTAACAGTCTGCTGCCTTGGTGGCCAAAGCCACTAGCTTaGCTTCATTGGACTCCACCA +
Preference number: 5 (lower is better)
Translates to: DAPSQRSVCLINSLLPWWPKPLA*LHWTPP
Trigger: TGGTGGAGTCCAATGAAGCAAAGCTAGTGGCTTTGG...CCACCAAGGCAGCAGACTGTTAATCAGACAAACAGATCTCTGAGAAGGTGCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp ATGCAACTCAGAAAGGAAAGAGCCCAAAGACGAGAGAACCTGCTTGTTAGCTCATTCCAAGGCTGCTCTTaGTTCGGGGATCTCCCTCTT +
Preference number: 5 (lower is better)
Translates to: MQLRKERAQRRENLLVSSFQGCS*FGDLPL
Trigger: AAGAGGGAGATCCCCGAACAAAGAGCAGCCTTGGAA...TGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGCTCTTTCCTTTCTGAGTTGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp TCATGGGTCTCCGGACAGAAGATACTATATCAGAGCTCCTGCTTCGAACTAGTCGCGGCAACACAGCTTTaGTCAAACTTTCCAAGGCTG +
Preference number: 5 (lower is better)
Translates to: SWVSGQKILYQSSCFELVAATQL*SNFPRL
Trigger: CAGCCTTGGAAAGTTTGACAAAAGCTGTGTTGCCGC...GACTAGTTCGAAGCAGGAGCTCTGATATAGTATCTTCTGTCCGGAGACCCATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR CAA 90 bp GCTTTGGTGTGCCTCCATGGCCAATTTTTCAGGCACCAAAACCCATTCCTGATTGCGGCAACACAGCTTTaGTCAAACTTTCCAAGGCTG +
Preference number: 5 (lower is better)
Translates to: ALVCLHGQFFRHQNPFLIAATQL*SNFPRL
Trigger: CAGCCTTGGAAAGTTTGACAAAAGCTGTGTTGCCGC...AATCAGGAATGGGTTTTGGTGCCTGAAAAATTGGCCATGGAGGCACACCAAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR CAA 90 bp GCTTTGGTGTGCCTCCATGGCCAATTTTTCAGGCACCAAAACCCATTCCTGATTTGGCCGGGGGTAGGTTaGCCAATAAATTGTCAAGAG +
Preference number: 5 (lower is better)
Translates to: ALVCLHGQFFRHQNPFLIWPGVG*PINCQE
Trigger: CTCTTGACAATTTATTGGCAAACCTACCCCCGGCCA...AATCAGGAATGGGTTTTGGTGCCTGAAAAATTGGCCATGGAGGCACACCAAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR CAA 90 bp TCATGGGTCTCCGGACAGAAGATACTATATCAGAGCTCCTGCTTCGAACTAGTCTATTTGCTGGAGTGGTaGCTGGAGATAGCTGAGGTG +
Preference number: 5 (lower is better)
Translates to: SWVSGQKILYQSSCFELVYLLEW*LEIAEV
Trigger: CACCTCAGCTATCTCCAGCAACCACTCCAGCAAATA...GACTAGTTCGAAGCAGGAGCTCTGATATAGTATCTTCTGTCCGGAGACCCATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR CAA 90 bp GCTTTGGTGTGCCTCCATGGCCAATTTTTCAGGCACCAAAACCCATTCCTGATTCAACACCTCTTCTGGTaGCACCTCCTGAATGGTTTC +
Preference number: 5 (lower is better)
Translates to: ALVCLHGQFFRHQNPFLIQHLFW*HLLNGF
Trigger: GAAACCATTCAGGAGGTGCAACCAGAAGAGGTGTTG...AATCAGGAATGGGTTTTGGTGCCTGAAAAATTGGCCATGGAGGCACACCAAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR CAA 90 bp GGAGCTCTGTCTGGGATTTCTGCAGTATATTATTTCGGAGGAGAAGAACCACCAAACAGGGACATCTCCTaGTCCTCCATCCGAAAGCTG +
Preference number: 5 (lower is better)
Translates to: GALSGISAVYYFGGEEPPNRDIS*SSIRKL
Trigger: CAGCTTTCGGATGGAGGACAAGGAGATGTCCCTGTT...TGGTGGTTCTTCTCCTCCGAAATAATATACTGCAGAAATCCCAGACAGAGCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR CAA 90 bp ATGCAACTCAGAAAGGAAAGAGCCCAAAGACGAGAGAACCTGCTTGTTAGCTCAAACAGGGACATCTCCTaGTCCTCCATCCGAAAGCTG +
Preference number: 5 (lower is better)
Translates to: MQLRKERAQRRENLLVSSNRDIS*SSIRKL
Trigger: CAGCTTTCGGATGGAGGACAAGGAGATGTCCCTGTT...TGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGCTCTTTCCTTTCTGAGTTGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp CGTTCTTCAGTCTCTCCTCTTGAGGAGTCCTTACTCGGGGATGAAGATGATGAAAGGGAGGACACTGAATaGGAGCGATTTGAAGGACCT +
Preference number: 5 (lower is better)
Translates to: RSSVSPLEESLLGDEDDEREDTE*ERFEGP
Trigger: AGGTCCTTCAAATCGCTCCAATTCAGTGTCCTCCCT...TTCATCATCTTCATCCCCGAGTAAGGACTCCTCAAGAGGAGAGACTGAAGAACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR CAA 90 bp TCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCTGATTGGGCCTCTGAGTCACTaGGCAATACCTCTACACTCC +
Preference number: 5 (lower is better)
Translates to: SSAFKAADAPSQRSVCLIGPLSH*AIPLHS
Trigger: GGAGTGTAGAGGTATTGCCAAGTGACTCAGAGGCCC...AATCAGACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp GCTTTGGTGTGCCTCCATGGCCAATTTTTCAGGCACCAAAACCCATTCCTGATTCATGGGAACCAAAGTTaGGCAACCTGGCCTCATTTC +
Preference number: 5 (lower is better)
Translates to: ALVCLHGQFFRHQNPFLIHGNQS*ATWPHF
Trigger: GAAATGAGGCCAGGTTGCCAAACTTTGGTTCCCATG...AATCAGGAATGGGTTTTGGTGCCTGAAAAATTGGCCATGGAGGCACACCAAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR CAA 90 bp GATGCACCTTCTCAGAGATCTGTTTGTCTGATTAACAGTCTGCTGCCTTGGTGGCATGGGAACCAAAGTTaGGCAACCTGGCCTCATTTC +
Preference number: 5 (lower is better)
Translates to: DAPSQRSVCLINSLLPWWHGNQS*ATWPHF
Trigger: GAAATGAGGCCAGGTTGCCAAACTTTGGTTCCCATG...CCACCAAGGCAGCAGACTGTTAATCAGACAAACAGATCTCTGAGAAGGTGCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp GAGTTAAAACATGGGAACCAAAGTTTGGCAACCTGGCCTCATTTCCTCCCACAGCATGGGAACCAAAGTTaGGCAACCTGGCCTCATTTC +
Preference number: 5 (lower is better)
Translates to: ELKHGNQSLATWPHFLPQHGNQS*ATWPHF
Trigger: GAAATGAGGCCAGGTTGCCAAACTTTGGTTCCCATG...CTGTGGGAGGAAATGAGGCCAGGTTGCCAAACTTTGGTTCCCATGTTTTAACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR CAA 90 bp TTTACCCCCAAAATCAGAGCTGCACTCAGATCTCAGGTCTTCAATCTTATTGGGCTTCAGTCTCTCCTCTaGAGGAGTCCTTACTCGGGG +
Preference number: 5 (lower is better)
Translates to: FTPKIRAALRSQVFNLIGLQSLL*RSPYSG
Trigger: CCCCGAGTAAGGACTCCTCAAGAGGAGAGACTGAAG...CCCAATAAGATTGAAGACCTGAGATCTGAGTGCAGCTCTGATTTTGGGGGTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR CAA 90 bp TCCTCCGCCAGCTATGGAGTCATGAGCACCCGAACCCATTTCACAGGTGTCACACTCCTGAAATCCCAATaGCTTATACCCATCAACAAA +
Preference number: 5 (lower is better)
Translates to: SSASYGVMSTRTHFTGVTLLKSQ*LIPINK
Trigger: TTTGTTGATGGGTATAAGCAATTGGGATTTCAGGAG...TGTGACACCTGTGAAATGGGTTCGGGTGCTCATGACTCCATAGCTGGCGGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR CAA 90 bp GCCCAAAGACGAGAGAACCTGCTTGTTAGCTCATTAACCTGTTTAGTAAAGATCCTCAGCCACCTGAGCTaGTGCACTGAGTCTAGGGCT +
Preference number: 5 (lower is better)
Translates to: AQRRENLLVSSLTCLVKILSHLS*CTESRA
Trigger: AGCCCTAGACTCAGTGCACAAGCTCAGGTGGCTGAG...GATCTTTACTAAACAGGTTAATGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp GATGCACCTTCTCAGAGATCTGTTTGTCTGATTAACAGTCTGCTGCCTTGGTGGTTTCATAGTTTGCCATaGCTCCATCACTGGGGCTGG +
Preference number: 5 (lower is better)
Translates to: DAPSQRSVCLINSLLPWWFHSLP*LHHWGW
Trigger: CCAGCCCCAGTGATGGAGCAATGGCAAACTATGAAA...CCACCAAGGCAGCAGACTGTTAATCAGACAAACAGATCTCTGAGAAGGTGCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp TGCTTAACATTTACTGAATCAAAGGCTGAAGTAAATGGACTCTCATCTAGGTCTCTGCGGGTGGGCTGCTaGGCTTGCAGAGTCTGGGAG +
Preference number: 5 (lower is better)
Translates to: CLTFTESKAEVNGLSSRSLRVGC*ACRVWE
Trigger: CTCCCAGACTCTGCAAGCCAAGCAGCCCACCCGCAG...AGACCTAGATGAGAGTCCATTTACTTCAGCCTTTGATTCAGTAAATGTTAAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR CAA 90 bp GATGCACCTTCTCAGAGATCTGTTTGTCTGATTAACAGTCTGCTGCCTTGGTGGCGATTGGCCACTTCTTaGTCCCGCAAAACTCTTTGC +
Preference number: 5 (lower is better)
Translates to: DAPSQRSVCLINSLLPWWRLATS*SRKTLC
Trigger: GCAAAGAGTTTTGCGGGACAAAGAAGTGGCCAATCG...CCACCAAGGCAGCAGACTGTTAATCAGACAAACAGATCTCTGAGAAGGTGCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp TCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCTGATTGGCCAGCTGTGCATCTaGAAGCTGTTCTTCACTCGC +
Preference number: 5 (lower is better)
Translates to: SSAFKAADAPSQRSVCLIGQLCI*KLFFTR
Trigger: GCGAGTGAAGAACAGCTTCAAGATGCACAGCTGGCC...AATCAGACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp GGAGCTCTGTCTGGGATTTCTGCAGTATATTATTTCGGAGGAGAAGAACCACCACTTGTGCTTGAAGCTTaGGTGTGCCTCCATGGCCAA +
Preference number: 5 (lower is better)
Translates to: GALSGISAVYYFGGEEPPLVLEA*VCLHGQ
Trigger: TTGGCCATGGAGGCACACCAAAGCTTCAAGCACAAG...TGGTGGTTCTTCTCCTCCGAAATAATATACTGCAGAAATCCCAGACAGAGCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR CAA 90 bp CCTCCATTTCAGCTGGAGTTAAAACATGGGAACCAAAGTTTGGCAACCTGGCCTGAATATCCTCAGAGGTaGCACTTATGCCTCCCTGAC +
Preference number: 5 (lower is better)
Translates to: PPFQLELKHGNQSLATWPEYPQR*HLCLPD
Trigger: GTCAGGGAGGCATAAGTGCAACCTCTGAGGATATTC...AGGCCAGGTTGCCAAACTTTGGTTCCCATGTTTTAACTCCAGCTGAAATGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497580.5
CDS TCA 90 bp GAATATCTAGTTTCACCATCTTCAATGTGGGAAAGGCTCAAAGGCTaGTCACTGAATGCCAGCTACTTGGGAGGGTCAGATGGGAGGATC +
Preference number: 5 (lower is better)
Translates to: EYLVSPSSMWERLKG*SLNASYLGGSDGRI
Trigger: GATCCTCCCATCTGACCCTCCCAAGTAGCTGGCATTCAGTGATCAGCCTTTGAGCCTTTCCCACATTGAAGATGGTGAAACTAGATATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297933.11
ENST00000394084.5
ENST00000467750.5
ENST00000495955.5
CDS GCA 90 bp ATCAGCCGAGATGTTCTGCAGTGCTTCGTCACGGGGAGAATCATGTaGACTTTCACCATCACCCATAACCTCTGTACTTTCATAGTTTGC +
Preference number: 5 (lower is better)
Translates to: ISRDVLQCFVTGRIM*TFTITHNLCTFIVC
Trigger: GCAAACTATGAAAGTACAGAGGTTATGGGTGATGGTGAAAGTGCACATGATTCTCCCCGTGACGAAGCACTGCAGAACATCTCGGCTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000312123.13
ENST00000394083.6
ENST00000394105.6
ENST00000470056.5
ENST00000474637.5
CDS CCA 90 bp TGCATGTTTAGGACCTCATTTTCTGACATCATCCCTGGAGTAAGCTaGGGACCTGTACCTAAGGAAATGACCAACACCTCTTCTGGTTGC +
Preference number: 5 (lower is better)
Translates to: CMFRTSFSDIIPGVS*GPVPKEMTNTSSGC
Trigger: GCAACCAGAAGAGGTGTTGGTCATTTCCTTAGGTACAGGTCCCCAGCTTACTCCAGGGATGATGTCAGAAAATGAGGTCCTAAACATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000265956.8
ENST00000297933.11
ENST00000312123.13
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000431329.5
ENST00000436712.2
ENST00000467750.5
ENST00000470056.5
ENST00000495955.5
ENST00000497580.5
CDS CCA 90 bp CCCCAAAATCAGAGCTGCACTCAGATCTCAGGTCTTCAATCTTATTaGGAATATCCTCAGAGGTTGCACTTATGCCTCCCTGACATCCGT +
Preference number: 5 (lower is better)
Translates to: PQNQSCTQISGLQSY*EYPQRLHLCLPDIR
Trigger: ACGGATGTCAGGGAGGCATAAGTGCAACCTCTGAGGATATTCCCAATAAGATTGAAGACCTGAGATCTGAGTGCAGCTCTGATTTTGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497580.5
CDS-3UTR CAA 90 bp CAGCTGGGGTCACTCATGGGTCTCCGGACAGAAGATACTATATCAGAGCTCCTGGTAGCTTTCATCTTCTaGCATGATGCAATTGCCATA +
Preference number: 5 (lower is better)
Translates to: QLGSLMGLRTEDTISELLVAFIF*HDAIAI
Trigger: TATGGCAATTGCATCATGCAAGAAGATGAAAGCTAC...CAGGAGCTCTGATATAGTATCTTCTGTCCGGAGACCCATGAGTGACCCCAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR CAA 90 bp GGAGCTCTGTCTGGGATTTCTGCAGTATATTATTTCGGAGGAGAAGAACCACCACCAAAGCCACTAGCTTaGCTTCATTGGACTCCACCA +
Preference number: 5 (lower is better)
Translates to: GALSGISAVYYFGGEEPPPKPLA*LHWTPP
Trigger: TGGTGGAGTCCAATGAAGCAAAGCTAGTGGCTTTGG...TGGTGGTTCTTCTCCTCCGAAATAATATACTGCAGAAATCCCAGACAGAGCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR CAA 90 bp TCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCTGATTTTCCAAGGCTGCTCTTaGTTCGGGGATCTCCCTCTT +
Preference number: 5 (lower is better)
Translates to: SSAFKAADAPSQRSVCLIFQGCS*FGDLPL
Trigger: AAGAGGGAGATCCCCGAACAAAGAGCAGCCTTGGAA...AATCAGACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp TTGACAGTAAGGGCAGGTCCTAATGGTCTTTGTATCCAGTGTCTATCACAGTGCGCGGCAACACAGCTTTaGTCAAACTTTCCAAGGCTG +
Preference number: 5 (lower is better)
Translates to: LTVRAGPNGLCIQCLSQCAATQL*SNFPRL
Trigger: CAGCCTTGGAAAGTTTGACAAAAGCTGTGTTGCCGC...GCACTGTGATAGACACTGGATACAAAGACCATTAGGACCTGCCCTTACTGTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394084.5
CDS-3UTR CAA 90 bp ATGCAACTCAGAAAGGAAAGAGCCCAAAGACGAGAGAACCTGCTTGTTAGCTCAGCGGCAACACAGCTTTaGTCAAACTTTCCAAGGCTG +
Preference number: 5 (lower is better)
Translates to: MQLRKERAQRRENLLVSSAATQL*SNFPRL
Trigger: CAGCCTTGGAAAGTTTGACAAAAGCTGTGTTGCCGC...TGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGCTCTTTCCTTTCTGAGTTGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp GTCTCCGGACAGAAGATACTATATCAGAGCTCCTGCTTCGAACTAGTCTCTCAGAATCCTTCCAGAAGATaGACGGAAGACAATGGAGGG +
Preference number: 5 (lower is better)
Translates to: VSGQKILYQSSCFELVSQNPSRR*TEDNGG
Trigger: CCCTCCATTGTCTTCCGTCAATCTTCTGGAAGGATT...CTGAGAGACTAGTTCGAAGCAGGAGCTCTGATATAGTATCTTCTGTCCGGAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR CAA 90 bp CTGGTGGGCACCGTGAGTTATTTCATCCATGTCTGGACTAGTGACAGAATCTTTTGGCCGGGGGTAGGTTaGCCAATAAATTGTCAAGAG +
Preference number: 5 (lower is better)
Translates to: LVGTVSYFIHVWTSDRIFWPGVG*PINCQE
Trigger: CTCTTGACAATTTATTGGCAAACCTACCCCCGGCCA...AAAGATTCTGTCACTAGTCCAGACATGGATGAAATAACTCACGGTGCCCACCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR CAA 90 bp ATGCAACTCAGAAAGGAAAGAGCCCAAAGACGAGAGAACCTGCTTGTTAGCTCATGGCCGGGGGTAGGTTaGCCAATAAATTGTCAAGAG +
Preference number: 5 (lower is better)
Translates to: MQLRKERAQRRENLLVSSWPGVG*PINCQE
Trigger: CTCTTGACAATTTATTGGCAAACCTACCCCCGGCCA...TGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGCTCTTTCCTTTCTGAGTTGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp ATCATACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTACTTTTTCCTGGCTaGGCCGGGGGTAGGTTTGCC +
Preference number: 5 (lower is better)
Translates to: IIQNNLQPSKQLMHLLRDLLFPG*AGGRFA
Trigger: GGCAAACCTACCCCCGGCCAAGCCAGGAAAAAGTAG...ATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGTATGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp TTGTATCCAGTGTCTATCACAGTGCCTCATGTGCAAGACACATCCACTCTCACATATTTGCTGGAGTGGTaGCTGGAGATAGCTGAGGTG +
Preference number: 5 (lower is better)
Translates to: LYPVSITVPHVQDTSTLTYLLEW*LEIAEV
Trigger: CACCTCAGCTATCTCCAGCAACCACTCCAGCAAATA...TGTGAGAGTGGATGTGTCTTGCACATGAGGCACTGTGATAGACACTGGATACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394084.5
CDS-3UTR CAA 90 bp GTTCCAGCTGGGGTCACTCATGGGTCTCCGGACAGAAGATACTATATCAGAGCTATCGATTCTTTTTATTaGCTGGAGTGGTTGCTGGAG +
Preference number: 5 (lower is better)
Translates to: VPAGVTHGSPDRRYYIRAIDSFY*LEWLLE
Trigger: CTCCAGCAACCACTCCAGCAAATAAAAAGAATCGAT...AGCTCTGATATAGTATCTTCTGTCCGGAGACCCATGAGTGACCCCAGCTGGAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR CAA 90 bp CTGGTGGGCACCGTGAGTTATTTCATCCATGTCTGGACTAGTGACAGAATCTTTCAACACCTCTTCTGGTaGCACCTCCTGAATGGTTTC +
Preference number: 5 (lower is better)
Translates to: LVGTVSYFIHVWTSDRIFQHLFW*HLLNGF
Trigger: GAAACCATTCAGGAGGTGCAACCAGAAGAGGTGTTG...AAAGATTCTGTCACTAGTCCAGACATGGATGAAATAACTCACGGTGCCCACCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR CAA 90 bp ATGCAACTCAGAAAGGAAAGAGCCCAAAGACGAGAGAACCTGCTTGTTAGCTCACAACACCTCTTCTGGTaGCACCTCCTGAATGGTTTC +
Preference number: 5 (lower is better)
Translates to: MQLRKERAQRRENLLVSSQHLFW*HLLNGF
Trigger: GAAACCATTCAGGAGGTGCAACCAGAAGAGGTGTTG...TGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGCTCTTTCCTTTCTGAGTTGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp ACTCTGACTGAGAAGGAGGAGAGGTCAGCTGGTGGGCACCGTGAGTTATTTCATGGTTTACCATGGAGTTaGTTTTCATCAACAGGGACA +
Preference number: 5 (lower is better)
Translates to: TLTEKEERSAGGHRELFHGLPWS*FSSTGT
Trigger: TGTCCCTGTTGATGAAAACAAACTCCATGGTAAACC...ATGAAATAACTCACGGTGCCCACCAGCTGACCTCTCCTCCTTCTCAGTCAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR CAA 90 bp GGGTCACTCATGGGTCTCCGGACAGAAGATACTATATCAGAGCTCCTGCTTCGAGGTTTACCATGGAGTTaGTTTTCATCAACAGGGACA +
Preference number: 5 (lower is better)
Translates to: GSLMGLRTEDTISELLLRGLPWS*FSSTGT
Trigger: TGTCCCTGTTGATGAAAACAAACTCCATGGTAAACC...TCGAAGCAGGAGCTCTGATATAGTATCTTCTGTCCGGAGACCCATGAGTGACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR CAA 90 bp ACTCTGACTGAGAAGGAGGAGAGGTCAGCTGGTGGGCACCGTGAGTTATTTCATCTGAATTGGAGCGATTaGAAGGACCTTCAGATATTC +
Preference number: 5 (lower is better)
Translates to: TLTEKEERSAGGHRELFHLNWSD*KDLQIF
Trigger: GAATATCTGAAGGTCCTTCAAATCGCTCCAATTCAG...ATGAAATAACTCACGGTGCCCACCAGCTGACCTCTCCTCCTTCTCAGTCAGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR CAA 90 bp ATGTCATGTATGGTAATCAGTCTATCTCCTAATGCAGGCTCACAAACTTCCACGGGGCCTCTGAGTCACTaGGCAATACCTCTACACTCC +
Preference number: 5 (lower is better)
Translates to: MSCMVISLSPNAGSQTSTGPLSH*AIPLHS
Trigger: GGAGTGTAGAGGTATTGCCAAGTGACTCAGAGGCCC...CGTGGAAGTTTGTGAGCCTGCATTAGGAGATAGACTGATTACCATACATGACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR CAA 90 bp ACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTGGGCCTCTGAGTCACTaGGCAATACCTCTACACTCC +
Preference number: 5 (lower is better)
Translates to: TKQSSAFKAADAPSQRSVGPLSH*AIPLHS
Trigger: GGAGTGTAGAGGTATTGCCAAGTGACTCAGAGGCCC...AACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp TTGAATGCCTCCATTTCAGCTGGAGTTAAAACATGGGAACCAAAGTTTGGCAACGGGCCTCTGAGTCACTaGGCAATACCTCTACACTCC +
Preference number: 5 (lower is better)
Translates to: LNASISAGVKTWEPKFGNGPLSH*AIPLHS
Trigger: GGAGTGTAGAGGTATTGCCAAGTGACTCAGAGGCCC...GTTGCCAAACTTTGGTTCCCATGTTTTAACTCCAGCTGAAATGGAGGCATTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR CAA 90 bp GATGCACCTTCTCAGAGATCTGTTTGTCTGATTAACAGTCTGCTGCCTTGGTGGGAATATCCTCAGAGGTaGCACTTATGCCGGACACAA +
Preference number: 5 (lower is better)
Translates to: DAPSQRSVCLINSLLPWWEYPQR*HLCRTQ
Trigger: TTGTGTCCGGCATAAGTGCAACCTCTGAGGATATTC...CCACCAAGGCAGCAGACTGTTAATCAGACAAACAGATCTCTGAGAAGGTGCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp CAGCTGGGGTCACTCATGGGTCTCCGGACAGAAGATACTATATCAGAGCTCCTGAGGTCTTCAATCTTATaGGGAATATCCTCAGAGGTT +
Preference number: 5 (lower is better)
Translates to: QLGSLMGLRTEDTISELLRSSIL*GISSEV
Trigger: AACCTCTGAGGATATTCCCAATAAGATTGAAGACCT...CAGGAGCTCTGATATAGTATCTTCTGTCCGGAGACCCATGAGTGACCCCAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR CAA 90 bp ATGCAACTCAGAAAGGAAAGAGCCCAAAGACGAGAGAACCTGCTTGTTAGCTCACATGGGAACCAAAGTTaGGCAACCTGGCCTCATTTC +
Preference number: 5 (lower is better)
Translates to: MQLRKERAQRRENLLVSSHGNQS*ATWPHF
Trigger: GAAATGAGGCCAGGTTGCCAAACTTTGGTTCCCATG...TGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGCTCTTTCCTTTCTGAGTTGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp TCTCTCCTCTTGAGGAGTCCTTACTCGGGGATGAAGATGATGAATGAGGTGCAGAGGGTAAGAATGCCTTaGCTTGAATGCCTCCATTTC +
Preference number: 5 (lower is better)
Translates to: SLLLRSPYSGMKMMNEVQRVRMP*LECLHF
Trigger: GAAATGGAGGCATTCAAGCAAAGGCATTCTTACCCT...CTGCACCTCATTCATCATCTTCATCCCCGAGTAAGGACTCCTCAAGAGGAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR CAA 90 bp ACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTCTTCAGTCTCTCCTCTaGAGGAGTCCTTACTCGGGG +
Preference number: 5 (lower is better)
Translates to: TKQSSAFKAADAPSQRSVLQSLL*RSPYSG
Trigger: CCCCGAGTAAGGACTCCTCAAGAGGAGAGACTGAAG...AACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp GCCCAAAGACGAGAGAACCTGCTTGTTAGCTCATTAACCTGTTTAGTAAAGATCCTTCAGTCTCTCCTCTaGAGGAGTCCTTACTCGGGG +
Preference number: 5 (lower is better)
Translates to: AQRRENLLVSSLTCLVKILQSLL*RSPYSG
Trigger: CCCCGAGTAAGGACTCCTCAAGAGGAGAGACTGAAG...GATCTTTACTAAACAGGTTAATGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp AAGGTCTGTTCCTGTCTGATTTCTCATCATCGCTATCTTTGCGTTCTTCAGTCTCTTCAGTCTCTCCTCTaGAGGAGTCCTTACTCGGGG +
Preference number: 5 (lower is better)
Translates to: KVCSCLISHHRYLCVLQSLQSLL*RSPYSG
Trigger: CCCCGAGTAAGGACTCCTCAAGAGGAGAGACTGAAG...AGACTGAAGAACGCAAAGATAGCGATGATGAGAAATCAGACAGGAACAGACCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR CAA 90 bp GTTCCAGCTGGGGTCACTCATGGGTCTCCGGACAGAAGATACTATATCAGAGCTATAAGCCGATCCAAATaGATTCTCTGTTGCTTCGCA +
Preference number: 5 (lower is better)
Translates to: VPAGVTHGSPDRRYYIRAISRSK*ILCCFA
Trigger: TGCGAAGCAACAGAGAATCAATTTGGATCGGCTTAT...AGCTCTGATATAGTATCTTCTGTCCGGAGACCCATGAGTGACCCCAGCTGGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497580.5
CDS-3UTR CAA 90 bp ATCATACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTCAGCCACCTGAGCTaGTGCACTGAGTCTAGGGCT +
Preference number: 5 (lower is better)
Translates to: IIQNNLQPSKQLMHLLRDLSHLS*CTESRA
Trigger: AGCCCTAGACTCAGTGCACAAGCTCAGGTGGCTGAG...ATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGTATGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp GGAGCTCTGTCTGGGATTTCTGCAGTATATTATTTCGGAGGAGAAGAACCACCATTTCATAGTTTGCCATaGCTCCATCACTGGGGCTGG +
Preference number: 5 (lower is better)
Translates to: GALSGISAVYYFGGEEPPFHSLP*LHHWGW
Trigger: CCAGCCCCAGTGATGGAGCAATGGCAAACTATGAAA...TGGTGGTTCTTCTCCTCCGAAATAATATACTGCAGAAATCCCAGACAGAGCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR CAA 90 bp TATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCATTAATGCTGCGGGTGGGCTGCTaGGCTTGCAGAGTCTGGGAG +
Preference number: 5 (lower is better)
Translates to: YSNPQCNSYLLSIRCSLMLRVGC*ACRVWE
Trigger: CTCCCAGACTCTGCAAGCCAAGCAGCCCACCCGCAG...CATTAATGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp GATGCACCTTCTCAGAGATCTGTTTGTCTGATTAACAGTCTGCTGCCTTGGTGGGTAAACCATTCCTTGTaGAATGGGTCAGCACTGGGA +
Preference number: 5 (lower is better)
Translates to: DAPSQRSVCLINSLLPWWVNHSL*NGSALG
Trigger: TCCCAGTGCTGACCCATTCAACAAGGAATGGTTTAC...CCACCAAGGCAGCAGACTGTTAATCAGACAAACAGATCTCTGAGAAGGTGCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp GATGCACCTTCTCAGAGATCTGTTTGTCTGATTAACAGTCTGCTGCCTTGGTGGCTGGTAAACCATTCCTaGTTGAATGGGTCAGCACTG +
Preference number: 5 (lower is better)
Translates to: DAPSQRSVCLINSLLPWWLVNHS*LNGSAL
Trigger: CAGTGCTGACCCATTCAACAAGGAATGGTTTACCAG...CCACCAAGGCAGCAGACTGTTAATCAGACAAACAGATCTCTGAGAAGGTGCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp ATGCAACTCAGAAAGGAAAGAGCCCAAAGACGAGAGAACCTGCTTGTTAGCTCACGATTGGCCACTTCTTaGTCCCGCAAAACTCTTTGC +
Preference number: 5 (lower is better)
Translates to: MQLRKERAQRRENLLVSSRLATS*SRKTLC
Trigger: GCAAAGAGTTTTGCGGGACAAAGAAGTGGCCAATCG...TGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGCTCTTTCCTTTCTGAGTTGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp ACACACGAAGTGAAACCAGACAGTGATGGCCCATGTACAAGACTTGTGCTTGAAGTGGTAAAGTATCGATaGGCCACTTCTTTGTCCCGC +
Preference number: 5 (lower is better)
Translates to: THEVKPDSDGPCTRLVLEVVKYR*ATSLSR
Trigger: GCGGGACAAAGAAGTGGCCAATCGATACTTTACCAC...TTCAAGCACAAGTCTTGTACATGGGCCATCACTGTCTGGTTTCACTTCGTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR CAA 90 bp ACACACGAAGTGAAACCAGACAGTGATGGCCCATGTACAAGACTTGTGCTTGAATTCTTCACTCGCGTTTaGCCATATGACATCCTGGGC +
Preference number: 5 (lower is better)
Translates to: THEVKPDSDGPCTRLVLEFFTRV*PYDILG
Trigger: GCCCAGGATGTCATATGGCAAAACGCGAGTGAAGAA...TTCAAGCACAAGTCTTGTACATGGGCCATCACTGTCTGGTTTCACTTCGTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR CAA 90 bp AAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTGGCCAGCTGTGCATCTaGAAGCTGTTCTTCACTCGC +
Preference number: 5 (lower is better)
Translates to: KQSSAFKAADAPSQRSVCGQLCI*KLFFTR
Trigger: GCGAGTGAAGAACAGCTTCAAGATGCACAGCTGGCC...ACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp ACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTGGCCAGCTGTGCATCTaGAAGCTGTTCTTCACTCGC +
Preference number: 5 (lower is better)
Translates to: TKQSSAFKAADAPSQRSVGQLCI*KLFFTR
Trigger: GCGAGTGAAGAACAGCTTCAAGATGCACAGCTGGCC...AACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp GATGCACCTTCTCAGAGATCTGTTTGTCTGATTAACAGTCTGCTGCCTTGGTGGAAGTATGTCCCCATCTaGATTAGGGTAGAAGGCGAG +
Preference number: 5 (lower is better)
Translates to: DAPSQRSVCLINSLLPWWKYVPI*IRVEGE
Trigger: CTCGCCTTCTACCCTAATCAAGATGGGGACATACTT...CCACCAAGGCAGCAGACTGTTAATCAGACAAACAGATCTCTGAGAAGGTGCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp GGAGCTCTGTCTGGGATTTCTGCAGTATATTATTTCGGAGGAGAAGAACCACCAGTACAAGACTTGTGCTaGAAGCTTTGGTGTGCCTCC +
Preference number: 5 (lower is better)
Translates to: GALSGISAVYYFGGEEPPVQDLC*KLWCAS
Trigger: GGAGGCACACCAAAGCTTCAAGCACAAGTCTTGTAC...TGGTGGTTCTTCTCCTCCGAAATAATATACTGCAGAAATCCCAGACAGAGCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS TCA 90 bp CAGGAAATTGGGAAGAGTAGCTCCACCTTCTCATCATCACCAGAATaGCAGTGTCAAAGTTCAGGGCAGACTGAATGGATGACGGATTTC +
Preference number: 5 (lower is better)
Translates to: QEIGKSSSTFSSSPE*QCQSSGQTEWMTDF
Trigger: GAAATCCGTCATCCATTCAGTCTGCCCTGAACTTTGACACTGTCATTCTGGTGATGATGAGAAGGTGGAGCTACTCTTCCCAATTTCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474637.5
CDS-3UTR CAA 90 bp CAGTGTCTATCACAGTGCCTCATGTGCAAGACACATCCACTCTCACAGGACTTCAACCTCTCAATTAGCTaGTTTGGATCTGTTTCCAGG +
Preference number: 5 (lower is better)
Translates to: QCLSQCLMCKTHPLSQDFNLSIS*FGSVSR
Trigger: CCTGGAAACAGATCCAAACAAGCTAATTGAGAGGTT...GAAGTCCTGTGAGAGTGGATGTGTCTTGCACATGAGGCACTGTGATAGACACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394084.5
CDS-3UTR CAA 90 bp AAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTTTCCAAGGCTGCTCTTaGTTCGGGGATCTCCCTCTT +
Preference number: 5 (lower is better)
Translates to: KQSSAFKAADAPSQRSVCFQGCS*FGDLPL
Trigger: AAGAGGGAGATCCCCGAACAAAGAGCAGCCTTGGAA...ACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp CCAAAATCAGAGCTGCACTCAGATCTCAGGTCTTCAATCTTATTGGGAATATCCTTCCAAGGCTGCTCTTaGTTCGGGGATCTCCCTCTT +
Preference number: 5 (lower is better)
Translates to: PKSELHSDLRSSILLGISFQGCS*FGDLPL
Trigger: AAGAGGGAGATCCCCGAACAAAGAGCAGCCTTGGAA...GGATATTCCCAATAAGATTGAAGACCTGAGATCTGAGTGCAGCTCTGATTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR CAA 90 bp TCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCTGATTGCGGCAACACAGCTTTaGTCAAACTTTCCAAGGCTG +
Preference number: 5 (lower is better)
Translates to: SSAFKAADAPSQRSVCLIAATQL*SNFPRL
Trigger: CAGCCTTGGAAAGTTTGACAAAAGCTGTGTTGCCGC...AATCAGACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp CTGGTGGGCACCGTGAGTTATTTCATCCATGTCTGGACTAGTGACAGAATCTTTAATCCTTCCAGAAGATaGACGGAAGACAATGGAGGG +
Preference number: 5 (lower is better)
Translates to: LVGTVSYFIHVWTSDRIFNPSRR*TEDNGG
Trigger: CCCTCCATTGTCTTCCGTCAATCTTCTGGAAGGATT...AAAGATTCTGTCACTAGTCCAGACATGGATGAAATAACTCACGGTGCCCACCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR CAA 90 bp ATGCAACTCAGAAAGGAAAGAGCCCAAAGACGAGAGAACCTGCTTGTTAGCTCAAATCCTTCCAGAAGATaGACGGAAGACAATGGAGGG +
Preference number: 5 (lower is better)
Translates to: MQLRKERAQRRENLLVSSNPSRR*TEDNGG
Trigger: CCCTCCATTGTCTTCCGTCAATCTTCTGGAAGGATT...TGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGCTCTTTCCTTTCTGAGTTGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp TCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCTGATTTGGCCGGGGGTAGGTTaGCCAATAAATTGTCAAGAG +
Preference number: 5 (lower is better)
Translates to: SSAFKAADAPSQRSVCLIWPGVG*PINCQE
Trigger: CTCTTGACAATTTATTGGCAAACCTACCCCCGGCCA...AATCAGACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp GTAGTACTAGTCTCTACTTGGGGACAAGAAAATAGAATATGCAACTCAGAAAGGCTACTTTTTCCTGGCTaGGCCGGGGGTAGGTTTGCC +
Preference number: 5 (lower is better)
Translates to: VVLVSTWGQENRICNSERLLFPG*AGGRFA
Trigger: GGCAAACCTACCCCCGGCCAAGCCAGGAAAAAGTAG...CCTTTCTGAGTTGCATATTCTATTTTCTTGTCCCCAAGTAGAGACTAGTACTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp TCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCTGATTCAACACCTCTTCTGGTaGCACCTCCTGAATGGTTTC +
Preference number: 5 (lower is better)
Translates to: SSAFKAADAPSQRSVCLIQHLFW*HLLNGF
Trigger: GAAACCATTCAGGAGGTGCAACCAGAAGAGGTGTTG...AATCAGACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp TCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCTGATTAGGGAGGACACTGAATaGGAGCGATTTGAAGGACCT +
Preference number: 5 (lower is better)
Translates to: SSAFKAADAPSQRSVCLIREDTE*ERFEGP
Trigger: AGGTCCTTCAAATCGCTCCAATTCAGTGTCCTCCCT...AATCAGACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp ATCATACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATGGGCCTCTGAGTCACTaGGCAATACCTCTACACTCC +
Preference number: 5 (lower is better)
Translates to: IIQNNLQPSKQLMHLLRDGPLSH*AIPLHS
Trigger: GGAGTGTAGAGGTATTGCCAAGTGACTCAGAGGCCC...ATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGTATGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp GCTTTGGTGTGCCTCCATGGCCAATTTTTCAGGCACCAAAACCCATTCCTGATTAGGGTAAGAATGCCTTaGCTTGAATGCCTCCATTTC +
Preference number: 5 (lower is better)
Translates to: ALVCLHGQFFRHQNPFLIRVRMP*LECLHF
Trigger: GAAATGGAGGCATTCAAGCAAAGGCATTCTTACCCT...AATCAGGAATGGGTTTTGGTGCCTGAAAAATTGGCCATGGAGGCACACCAAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR CAA 90 bp GATGCACCTTCTCAGAGATCTGTTTGTCTGATTAACAGTCTGCTGCCTTGGTGGAGGGTAAGAATGCCTTaGCTTGAATGCCTCCATTTC +
Preference number: 5 (lower is better)
Translates to: DAPSQRSVCLINSLLPWWRVRMP*LECLHF
Trigger: GAAATGGAGGCATTCAAGCAAAGGCATTCTTACCCT...CCACCAAGGCAGCAGACTGTTAATCAGACAAACAGATCTCTGAGAAGGTGCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp GATGCACCTTCTCAGAGATCTGTTTGTCTGATTAACAGTCTGCTGCCTTGGTGGTCATCATCGCTATCTTaGCGTTCTTCAGTCTCTCCT +
Preference number: 5 (lower is better)
Translates to: DAPSQRSVCLINSLLPWWSSSLS*RSSVSP
Trigger: AGGAGAGACTGAAGAACGCAAAGATAGCGATGATGA...CCACCAAGGCAGCAGACTGTTAATCAGACAAACAGATCTCTGAGAAGGTGCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp ATGCAACTCAGAAAGGAAAGAGCCCAAAGACGAGAGAACCTGCTTGTTAGCTCAGTAAACCATTCCTTGTaGAATGGGTCAGCACTGGGA +
Preference number: 5 (lower is better)
Translates to: MQLRKERAQRRENLLVSSVNHSL*NGSALG
Trigger: TCCCAGTGCTGACCCATTCAACAAGGAATGGTTTAC...TGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGCTCTTTCCTTTCTGAGTTGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp TCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCTGATTCGATTGGCCACTTCTTaGTCCCGCAAAACTCTTTGC +
Preference number: 5 (lower is better)
Translates to: SSAFKAADAPSQRSVCLIRLATS*SRKTLC
Trigger: GCAAAGAGTTTTGCGGGACAAAGAAGTGGCCAATCG...AATCAGACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp TCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCTGATTTTCTTCACTCGCGTTTaGCCATATGACATCCTGGGC +
Preference number: 5 (lower is better)
Translates to: SSAFKAADAPSQRSVCLIFFTRV*PYDILG
Trigger: GCCCAGGATGTCATATGGCAAAACGCGAGTGAAGAA...AATCAGACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp CACCACTATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCAGGCCAGCTGTGCATCTaGAAGCTGTTCTTCACTCGC +
Preference number: 5 (lower is better)
Translates to: HHYSNPQCNSYLLSIRCSGQLCI*KLFFTR
Trigger: GCGAGTGAAGAACAGCTTCAAGATGCACAGCTGGCC...TGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATAGTGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp ATGCAACTCAGAAAGGAAAGAGCCCAAAGACGAGAGAACCTGCTTGTTAGCTCAAAGTATGTCCCCATCTaGATTAGGGTAGAAGGCGAG +
Preference number: 5 (lower is better)
Translates to: MQLRKERAQRRENLLVSSKYVPI*IRVEGE
Trigger: CTCGCCTTCTACCCTAATCAAGATGGGGACATACTT...TGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGCTCTTTCCTTTCTGAGTTGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp CACCACTATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCATGGTGGGCCTTGGTCTaGGTCACTTTCGGTCATCGA +
Preference number: 5 (lower is better)
Translates to: HHYSNPQCNSYLLSIRCSWWALV*VTFGHR
Trigger: TCGATGACCGAAAGTGACCAAGACCAAGGCCCACCA...TGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATAGTGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp TCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCTGATTGTACAAGACTTGTGCTaGAAGCTTTGGTGTGCCTCC +
Preference number: 5 (lower is better)
Translates to: SSAFKAADAPSQRSVCLIVQDLC*KLWCAS
Trigger: GGAGGCACACCAAAGCTTCAAGCACAAGTCTTGTAC...AATCAGACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR CAA 90 bp ATGCAACTCAGAAAGGAAAGAGCCCAAAGACGAGAGAACCTGCTTGTTAGCTCAGCCCATGTACAAGACTaGTGCTTGAAGCTTTGGTGT +
Preference number: 5 (lower is better)
Translates to: MQLRKERAQRRENLLVSSAHVQD*CLKLWC
Trigger: ACACCAAAGCTTCAAGCACAAGTCTTGTACATGGGC...TGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGCTCTTTCCTTTCTGAGTTGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR CAA 90 bp ATCATACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATGCTGAGATTGTTCTCTaGCTCACGCACCTCAGGGAC +
Preference number: 5 (lower is better)
Translates to: IIQNNLQPSKQLMHLLRDAEIVL*LTHLRD
Trigger: GTCCCTGAGGTGCGTGAGCAAGAGAACAATCTCAGC...ATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGTATGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR CAA 90 bp GAGTTAAAACATGGGAACCAAAGTTTGGCAACCTGGCCTCATTTCCTCCCACAGCAGGAAGAGATGCTTTaGCCAACTCAAATGATGCCA +
Preference number: 5 (lower is better)
Translates to: ELKHGNQSLATWPHFLPQQEEML*PTQMMP
Trigger: TGGCATCATTTGAGTTGGCAAAAGCATCTCTTCCTG...CTGTGGGAGGAAATGAGGCCAGGTTGCCAAACTTTGGTTCCCATGTTTTAACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497580.5
CDS GCA 90 bp TTGCTGGAGATAGCTGAGGTGTATTGTAGGGAGTCATTTCTAAACTaGTACTTTTTCCTGGCTTGGCCGGGGGTAGGTTTGCCAATAAAT +
Preference number: 5 (lower is better)
Translates to: LLEIAEVYCRESFLN*YFFLAWPGVGLPIN
Trigger: ATTTATTGGCAAACCTACCCCCGGCCAAGCCAGGAAAAAGTAGCAGTTTAGAAATGACTCCCTACAATACACCTCAGCTATCTCCAGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENST00000265956.8
ENST00000297933.11
ENST00000312123.13
ENST00000394083.6
ENST00000394084.5
ENST00000394104.6
ENST00000394105.6
ENST00000431329.5
ENST00000436712.2
ENST00000467750.5
ENST00000470056.5
ENST00000495955.5
ENST00000497580.5
CDS GCA 90 bp TCTTGGTCACTTTCGGTCATCGATGGTTTTAATGAATTCTACTGCTaGTGTGAACTGCATCCACCAATAGGACTCCTCTCCAGACAGACA +
Preference number: 5 (lower is better)
Translates to: SWSLSVIDGFNEFYC*CELHPPIGLLSRQT
Trigger: TGTCTGTCTGGAGAGGAGTCCTATTGGTGGATGCAGTTCACAGCAGCAGTAGAATTCATTAAAACCATCGATGACCGAAAGTGACCAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000474637.5
ENST00000495955.5
CDS-3UTR CAA 90 bp CAGTGTCTATCACAGTGCCTCATGTGCAAGACACATCCACTCTCACAGGACTTCTCTCAATTAGCTTGTTaGGATCTGTTTCCAGGTGAT +
Preference number: 5 (lower is better)
Translates to: QCLSQCLMCKTHPLSQDFSQLAC*DLFPGD
Trigger: ATCACCTGGAAACAGATCCAAACAAGCTAATTGAGA...GAAGTCCTGTGAGAGTGGATGTGTCTTGCACATGAGGCACTGTGATAGACACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394084.5
CDS-3UTR CAA 90 bp GATGCACCTTCTCAGAGATCTGTTTGTCTGATTAACAGTCTGCTGCCTTGGTGGAACCTCTCAATTAGCTaGTTTGGATCTGTTTCCAGG +
Preference number: 5 (lower is better)
Translates to: DAPSQRSVCLINSLLPWWNLSIS*FGSVSR
Trigger: CCTGGAAACAGATCCAAACAAGCTAATTGAGAGGTT...CCACCAAGGCAGCAGACTGTTAATCAGACAAACAGATCTCTGAGAAGGTGCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp TTGAATGCCTCCATTTCAGCTGGAGTTAAAACATGGGAACCAAAGTTTGGCAACCCAAAGCCACTAGCTTaGCTTCATTGGACTCCACCA +
Preference number: 5 (lower is better)
Translates to: LNASISAGVKTWEPKFGNPKPLA*LHWTPP
Trigger: TGGTGGAGTCCAATGAAGCAAAGCTAGTGGCTTTGG...GTTGCCAAACTTTGGTTCCCATGTTTTAACTCCAGCTGAAATGGAGGCATTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR CAA 90 bp ACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTCCAAAGCCACTAGCTTaGCTTCATTGGACTCCACCA +
Preference number: 5 (lower is better)
Translates to: TKQSSAFKAADAPSQRSVPKPLA*LHWTPP
Trigger: TGGTGGAGTCCAATGAAGCAAAGCTAGTGGCTTTGG...AACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp ACGCTTAGTATGCTGAAGGGTACTAGTCTCTTCTTGCTCTCCCTAACTAAACTACCAAAGCCACTAGCTTaGCTTCATTGGACTCCACCA +
Preference number: 5 (lower is better)
Translates to: TLSMLKGTSLFLLSLTKLPKPLA*LHWTPP
Trigger: TGGTGGAGTCCAATGAAGCAAAGCTAGTGGCTTTGG...TAGTTTAGTTAGGGAGAGCAAGAAGAGACTAGTACCCTTCAGCATACTAAGCGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394084.5
CDS-3UTR CAA 90 bp CCTCCATTTCAGCTGGAGTTAAAACATGGGAACCAAAGTTTGGCAACCTGGCCTCCATATTGTTCTGGATaGACAACTGCAGGACAAATG +
Preference number: 5 (lower is better)
Translates to: PPFQLELKHGNQSLATWPPYCSG*TTAGQM
Trigger: CATTTGTCCTGCAGTTGTCAATCCAGAACAATATGG...AGGCCAGGTTGCCAAACTTTGGTTCCCATGTTTTAACTCCAGCTGAAATGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR CAA 90 bp ATGTCATGTATGGTAATCAGTCTATCTCCTAATGCAGGCTCACAAACTTCCACGGCGGCAACACAGCTTTaGTCAAACTTTCCAAGGCTG +
Preference number: 5 (lower is better)
Translates to: MSCMVISLSPNAGSQTSTAATQL*SNFPRL
Trigger: CAGCCTTGGAAAGTTTGACAAAAGCTGTGTTGCCGC...CGTGGAAGTTTGTGAGCCTGCATTAGGAGATAGACTGATTACCATACATGACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR CAA 90 bp ACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTGCGGCAACACAGCTTTaGTCAAACTTTCCAAGGCTG +
Preference number: 5 (lower is better)
Translates to: TKQSSAFKAADAPSQRSVAATQL*SNFPRL
Trigger: CAGCCTTGGAAAGTTTGACAAAAGCTGTGTTGCCGC...AACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp ACCGTGAGTTATTTCATCCATGTCTGGACTAGTGACAGAATCTTTACCCCCAAAGCGGCAACACAGCTTTaGTCAAACTTTCCAAGGCTG +
Preference number: 5 (lower is better)
Translates to: TVSYFIHVWTSDRIFTPKAATQL*SNFPRL
Trigger: CAGCCTTGGAAAGTTTGACAAAAGCTGTGTTGCCGC...TTTGGGGGTAAAGATTCTGTCACTAGTCCAGACATGGATGAAATAACTCACGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR CAA 90 bp TCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCTGATTAATCCTTCCAGAAGATaGACGGAAGACAATGGAGGG +
Preference number: 5 (lower is better)
Translates to: SSAFKAADAPSQRSVCLINPSRR*TEDNGG
Trigger: CCCTCCATTGTCTTCCGTCAATCTTCTGGAAGGATT...AATCAGACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp ACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGGCCGGGGGTAGGTTaGCCAATAAATTGTCAAGAG +
Preference number: 5 (lower is better)
Translates to: TKQSSAFKAADAPSQRSVWPGVG*PINCQE
Trigger: CTCTTGACAATTTATTGGCAAACCTACCCCCGGCCA...AACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp TGCTTAACATTTACTGAATCAAAGGCTGAAGTAAATGGACTCTCATCTAGGTCTCTACTTTTTCCTGGCTaGGCCGGGGGTAGGTTTGCC +
Preference number: 5 (lower is better)
Translates to: CLTFTESKAEVNGLSSRSLLFPG*AGGRFA
Trigger: GGCAAACCTACCCCCGGCCAAGCCAGGAAAAAGTAG...AGACCTAGATGAGAGTCCATTTACTTCAGCCTTTGATTCAGTAAATGTTAAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR CAA 90 bp ACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTATTTGCTGGAGTGGTaGCTGGAGATAGCTGAGGTG +
Preference number: 5 (lower is better)
Translates to: TKQSSAFKAADAPSQRSVYLLEW*LEIAEV
Trigger: CACCTCAGCTATCTCCAGCAACCACTCCAGCAAATA...AACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp AAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTTATTTGCTGGAGTGGTaGCTGGAGATAGCTGAGGTG +
Preference number: 5 (lower is better)
Translates to: KQSSAFKAADAPSQRSVCYLLEW*LEIAEV
Trigger: CACCTCAGCTATCTCCAGCAACCACTCCAGCAAATA...ACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp GCCCAAAGACGAGAGAACCTGCTTGTTAGCTCATTAACCTGTTTAGTAAAGATCTATTTGCTGGAGTGGTaGCTGGAGATAGCTGAGGTG +
Preference number: 5 (lower is better)
Translates to: AQRRENLLVSSLTCLVKIYLLEW*LEIAEV
Trigger: CACCTCAGCTATCTCCAGCAACCACTCCAGCAAATA...GATCTTTACTAAACAGGTTAATGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp ACCGTGAGTTATTTCATCCATGTCTGGACTAGTGACAGAATCTTTACCCCCAAATATTTGCTGGAGTGGTaGCTGGAGATAGCTGAGGTG +
Preference number: 5 (lower is better)
Translates to: TVSYFIHVWTSDRIFTPKYLLEW*LEIAEV
Trigger: CACCTCAGCTATCTCCAGCAACCACTCCAGCAAATA...TTTGGGGGTAAAGATTCTGTCACTAGTCCAGACATGGATGAAATAACTCACGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR CAA 90 bp ACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTCAACACCTCTTCTGGTaGCACCTCCTGAATGGTTTC +
Preference number: 5 (lower is better)
Translates to: TKQSSAFKAADAPSQRSVQHLFW*HLLNGF
Trigger: GAAACCATTCAGGAGGTGCAACCAGAAGAGGTGTTG...AACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp ATCATACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATAACAGGGACATCTCCTaGTCCTCCATCCGAAAGCTG +
Preference number: 5 (lower is better)
Translates to: IIQNNLQPSKQLMHLLRDNRDIS*SSIRKL
Trigger: CAGCTTTCGGATGGAGGACAAGGAGATGTCCCTGTT...ATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGTATGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp GCTTTGGTGTGCCTCCATGGCCAATTTTTCAGGCACCAAAACCCATTCCTGATTGGTTTACCATGGAGTTaGTTTTCATCAACAGGGACA +
Preference number: 5 (lower is better)
Translates to: ALVCLHGQFFRHQNPFLIGLPWS*FSSTGT
Trigger: TGTCCCTGTTGATGAAAACAAACTCCATGGTAAACC...AATCAGGAATGGGTTTTGGTGCCTGAAAAATTGGCCATGGAGGCACACCAAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR CAA 90 bp GATGCACCTTCTCAGAGATCTGTTTGTCTGATTAACAGTCTGCTGCCTTGGTGGCTGAATTGGAGCGATTaGAAGGACCTTCAGATATTC +
Preference number: 5 (lower is better)
Translates to: DAPSQRSVCLINSLLPWWLNWSD*KDLQIF
Trigger: GAATATCTGAAGGTCCTTCAAATCGCTCCAATTCAG...CCACCAAGGCAGCAGACTGTTAATCAGACAAACAGATCTCTGAGAAGGTGCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp TTGAATGCCTCCATTTCAGCTGGAGTTAAAACATGGGAACCAAAGTTTGGCAACAGGGAGGACACTGAATaGGAGCGATTTGAAGGACCT +
Preference number: 5 (lower is better)
Translates to: LNASISAGVKTWEPKFGNREDTE*ERFEGP
Trigger: AGGTCCTTCAAATCGCTCCAATTCAGTGTCCTCCCT...GTTGCCAAACTTTGGTTCCCATGTTTTAACTCCAGCTGAAATGGAGGCATTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR CAA 90 bp ACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTAGGGAGGACACTGAATaGGAGCGATTTGAAGGACCT +
Preference number: 5 (lower is better)
Translates to: TKQSSAFKAADAPSQRSVREDTE*ERFEGP
Trigger: AGGTCCTTCAAATCGCTCCAATTCAGTGTCCTCCCT...AACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp GTAGTACTAGTCTCTACTTGGGGACAAGAAAATAGAATATGCAACTCAGAAAGGGGGCCTCTGAGTCACTaGGCAATACCTCTACACTCC +
Preference number: 5 (lower is better)
Translates to: VVLVSTWGQENRICNSERGPLSH*AIPLHS
Trigger: GGAGTGTAGAGGTATTGCCAAGTGACTCAGAGGCCC...CCTTTCTGAGTTGCATATTCTATTTTCTTGTCCCCAAGTAGAGACTAGTACTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp ACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTCATGGGAACCAAAGTTaGGCAACCTGGCCTCATTTC +
Preference number: 5 (lower is better)
Translates to: TKQSSAFKAADAPSQRSVHGNQS*ATWPHF
Trigger: GAAATGAGGCCAGGTTGCCAAACTTTGGTTCCCATG...AACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp AAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCATGGGAACCAAAGTTaGGCAACCTGGCCTCATTTC +
Preference number: 5 (lower is better)
Translates to: KQSSAFKAADAPSQRSVCHGNQS*ATWPHF
Trigger: GAAATGAGGCCAGGTTGCCAAACTTTGGTTCCCATG...ACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp CTGGTGGGCACCGTGAGTTATTTCATCCATGTCTGGACTAGTGACAGAATCTTTTCATCATCGCTATCTTaGCGTTCTTCAGTCTCTCCT +
Preference number: 5 (lower is better)
Translates to: LVGTVSYFIHVWTSDRIFSSSLS*RSSVSP
Trigger: AGGAGAGACTGAAGAACGCAAAGATAGCGATGATGA...AAAGATTCTGTCACTAGTCCAGACATGGATGAAATAACTCACGGTGCCCACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR CAA 90 bp CTGGAGTTAAAACATGGGAACCAAAGTTTGGCAACCTGGCCTCATTTCCTCCCACAAATTGATTCTCTGTaGCTTCGCAATCCATGCTGT +
Preference number: 5 (lower is better)
Translates to: LELKHGNQSLATWPHFLPQIDSL*LRNPCC
Trigger: ACAGCATGGATTGCGAAGCAACAGAGAATCAATTTG...TGGGAGGAAATGAGGCCAGGTTGCCAAACTTTGGTTCCCATGTTTTAACTCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497580.5
CDS-3UTR CAA 90 bp GATGCACCTTCTCAGAGATCTGTTTGTCTGATTAACAGTCTGCTGCCTTGGTGGATAAGCCGATCCAAATaGATTCTCTGTTGCTTCGCA +
Preference number: 5 (lower is better)
Translates to: DAPSQRSVCLINSLLPWWISRSK*ILCCFA
Trigger: TGCGAAGCAACAGAGAATCAATTTGGATCGGCTTAT...CCACCAAGGCAGCAGACTGTTAATCAGACAAACAGATCTCTGAGAAGGTGCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp AGTAATCGCAAATACCTCATCACTGTTAATCCACTTACTAAAAATCCTTTGGGCCTCAGCCACCTGAGCTaGTGCACTGAGTCTAGGGCT +
Preference number: 5 (lower is better)
Translates to: SNRKYLITVNPLTKNPLGLSHLS*CTESRA
Trigger: AGCCCTAGACTCAGTGCACAAGCTCAGGTGGCTGAG...GCCCAAAGGATTTTTAGTAAGTGGATTAACAGTGATGAGGTATTTGCGATTACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR CAA 90 bp ACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTTTCATAGTTTGCCATaGCTCCATCACTGGGGCTGG +
Preference number: 5 (lower is better)
Translates to: TKQSSAFKAADAPSQRSVFHSLP*LHHWGW
Trigger: CCAGCCCCAGTGATGGAGCAATGGCAAACTATGAAA...AACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp GGAGCTCTGTCTGGGATTTCTGCAGTATATTATTTCGGAGGAGAAGAACCACCACTGTACTTTCATAGTTaGCCATTGCTCCATCACTGG +
Preference number: 5 (lower is better)
Translates to: GALSGISAVYYFGGEEPPLYFHS*PLLHHW
Trigger: CCAGTGATGGAGCAATGGCAAACTATGAAAGTACAG...TGGTGGTTCTTCTCCTCCGAAATAATATACTGCAGAAATCCCAGACAGAGCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR CAA 90 bp ATGTCATGTATGGTAATCAGTCTATCTCCTAATGCAGGCTCACAAACTTCCACGGGCACACACAGCGCATaGTTTCTTGAAGTTGAGCCA +
Preference number: 5 (lower is better)
Translates to: MSCMVISLSPNAGSQTSTGTHSA*FLEVEP
Trigger: TGGCTCAACTTCAAGAAACAATGCGCTGTGTGTGCC...CGTGGAAGTTTGTGAGCCTGCATTAGGAGATAGACTGATTACCATACATGACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR CAA 90 bp ACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTGGCACACACAGCGCATaGTTTCTTGAAGTTGAGCCA +
Preference number: 5 (lower is better)
Translates to: TKQSSAFKAADAPSQRSVGTHSA*FLEVEP
Trigger: TGGCTCAACTTCAAGAAACAATGCGCTGTGTGTGCC...AACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp GCCCAAAGACGAGAGAACCTGCTTGTTAGCTCATTAACCTGTTTAGTAAAGATCGGCACACACAGCGCATaGTTTCTTGAAGTTGAGCCA +
Preference number: 5 (lower is better)
Translates to: AQRRENLLVSSLTCLVKIGTHSA*FLEVEP
Trigger: TGGCTCAACTTCAAGAAACAATGCGCTGTGTGTGCC...GATCTTTACTAAACAGGTTAATGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp AAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTTTCTTCACTCGCGTTTaGCCATATGACATCCTGGGC +
Preference number: 5 (lower is better)
Translates to: KQSSAFKAADAPSQRSVCFFTRV*PYDILG
Trigger: GCCCAGGATGTCATATGGCAAAACGCGAGTGAAGAA...ACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp GCCCAAAGACGAGAGAACCTGCTTGTTAGCTCATTAACCTGTTTAGTAAAGATCTTCTTCACTCGCGTTTaGCCATATGACATCCTGGGC +
Preference number: 5 (lower is better)
Translates to: AQRRENLLVSSLTCLVKIFFTRV*PYDILG
Trigger: GCCCAGGATGTCATATGGCAAAACGCGAGTGAAGAA...GATCTTTACTAAACAGGTTAATGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp GTAGTACTAGTCTCTACTTGGGGACAAGAAAATAGAATATGCAACTCAGAAAGGTGGTGGGCCTTGGTCTaGGTCACTTTCGGTCATCGA +
Preference number: 5 (lower is better)
Translates to: VVLVSTWGQENRICNSERWWALV*VTFGHR
Trigger: TCGATGACCGAAAGTGACCAAGACCAAGGCCCACCA...CCTTTCTGAGTTGCATATTCTATTTTCTTGTCCCCAAGTAGAGACTAGTACTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp AAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTGTACAAGACTTGTGCTaGAAGCTTTGGTGTGCCTCC +
Preference number: 5 (lower is better)
Translates to: KQSSAFKAADAPSQRSVCVQDLC*KLWCAS
Trigger: GGAGGCACACCAAAGCTTCAAGCACAAGTCTTGTAC...ACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR CAA 90 bp AAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTAGGGAGGACACTGAATaGGAGCGATTTGAAGGACCA +
Preference number: 5 (lower is better)
Translates to: KQSSAFKAADAPSQRSVCREDTE*ERFEGP
Trigger: TGGTCCTTCAAATCGCTCCAATTCAGTGTCCTCCCT...ACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394083.6
CDS TCA 90 bp TGCCTGAATCTATCTGAGCCCTTCTCTCCAAAGAGTTTTTCCTGCTaGGATGGAGAGAACCTCTCAATTAGCTTGTTTGGATCTGTTTCC +
Preference number: 5 (lower is better)
Translates to: CLNLSEPFSPKSFSC*DGENLSISLFGSVS
Trigger: GGAAACAGATCCAAACAAGCTAATTGAGAGGTTCTCTCCATCTCAGCAGGAAAAACTCTTTGGAGAGAAGGGCTCAGATAGATTCAGGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000265956.8
ENST00000297933.11
ENST00000312123.13
ENST00000394083.6
ENST00000394084.5
ENST00000394104.6
ENST00000394105.6
ENST00000431329.5
ENST00000436712.2
ENST00000467750.5
ENST00000470056.5
ENST00000495955.5
ENST00000497580.5
CDS GCA 90 bp AGAGGTCAGCTGGTGGGCACTAGAAGACAGCTGGATTCTCATGTCTaGTTCTGCTTCAATGTGTTGAAAATGTTGTTTTGGCTGAAGTAT +
Preference number: 5 (lower is better)
Translates to: RGQLVGTRRQLDSHV*FCFNVLKMLFWLKY
Trigger: ATACTTCAGCCAAAACAACATTTTCAACACATTGAAGCAGAAGCAGACATGAGAATCCAGCTGTCTTCTAGTGCCCACCAGCTGACCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394105.6
CDS-3UTR CAA 90 bp ACACACGAAGTGAAACCAGACAGTGATGGCCCATGTACAAGACTTGTGCTTGAATCTTGCATGATGCAATaGCCATACAGGGAGGTAAAA +
Preference number: 5 (lower is better)
Translates to: THEVKPDSDGPCTRLVLESCMMQ*PYREVK
Trigger: TTTTACCTCCCTGTATGGCAATTGCATCATGCAAGA...TTCAAGCACAAGTCTTGTACATGGGCCATCACTGTCTGGTTTCACTTCGTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR CAA 90 bp GATGCACCTTCTCAGAGATCTGTTTGTCTGATTAACAGTCTGCTGCCTTGGTGGTCTCAATTAGCTTGTTaGGATCTGTTTCCAGGTGAT +
Preference number: 5 (lower is better)
Translates to: DAPSQRSVCLINSLLPWWSQLAC*DLFPGD
Trigger: ATCACCTGGAAACAGATCCAAACAAGCTAATTGAGA...CCACCAAGGCAGCAGACTGTTAATCAGACAAACAGATCTCTGAGAAGGTGCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp ACACACGAAGTGAAACCAGACAGTGATGGCCCATGTACAAGACTTGTGCTTGAAAACCTCTCAATTAGCTaGTTTGGATCTGTTTCCAGG +
Preference number: 5 (lower is better)
Translates to: THEVKPDSDGPCTRLVLENLSIS*FGSVSR
Trigger: CCTGGAAACAGATCCAAACAAGCTAATTGAGAGGTT...TTCAAGCACAAGTCTTGTACATGGGCCATCACTGTCTGGTTTCACTTCGTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR CAA 90 bp ATCATACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCCAAAGCCACTAGCTTaGCTTCATTGGACTCCACCA +
Preference number: 5 (lower is better)
Translates to: IIQNNLQPSKQLMHLLRDPKPLA*LHWTPP
Trigger: TGGTGGAGTCCAATGAAGCAAAGCTAGTGGCTTTGG...ATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGTATGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp CACCACTATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCACCAAAGCCACTAGCTTaGCTTCATTGGACTCCACCA +
Preference number: 5 (lower is better)
Translates to: HHYSNPQCNSYLLSIRCSPKPLA*LHWTPP
Trigger: TGGTGGAGTCCAATGAAGCAAAGCTAGTGGCTTTGG...TGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATAGTGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp GCCCAAAGACGAGAGAACCTGCTTGTTAGCTCATTAACCTGTTTAGTAAAGATCAATCCTTCCAGAAGATaGACGGAAGACAATGGAGGG +
Preference number: 5 (lower is better)
Translates to: AQRRENLLVSSLTCLVKINPSRR*TEDNGG
Trigger: CCCTCCATTGTCTTCCGTCAATCTTCTGGAAGGATT...GATCTTTACTAAACAGGTTAATGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp CACCACTATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCATGGCCGGGGGTAGGTTaGCCAATAAATTGTCAAGAG +
Preference number: 5 (lower is better)
Translates to: HHYSNPQCNSYLLSIRCSWPGVG*PINCQE
Trigger: CTCTTGACAATTTATTGGCAAACCTACCCCCGGCCA...TGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATAGTGGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp TATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCATTAATGCTACTTTTTCCTGGCTaGGCCGGGGGTAGGTTTGCC +
Preference number: 5 (lower is better)
Translates to: YSNPQCNSYLLSIRCSLMLLFPG*AGGRFA
Trigger: GGCAAACCTACCCCCGGCCAAGCCAGGAAAAAGTAG...CATTAATGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp CACCACTATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCATATTTGCTGGAGTGGTaGCTGGAGATAGCTGAGGTG +
Preference number: 5 (lower is better)
Translates to: HHYSNPQCNSYLLSIRCSYLLEW*LEIAEV
Trigger: CACCTCAGCTATCTCCAGCAACCACTCCAGCAAATA...TGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATAGTGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp ATGCAACTCAGAAAGGAAAGAGCCCAAAGACGAGAGAACCTGCTTGTTAGCTCACTGAATTGGAGCGATTaGAAGGACCTTCAGATATTC +
Preference number: 5 (lower is better)
Translates to: MQLRKERAQRRENLLVSSLNWSD*KDLQIF
Trigger: GAATATCTGAAGGTCCTTCAAATCGCTCCAATTCAG...TGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGCTCTTTCCTTTCTGAGTTGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp ATCATACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATAGGGAGGACACTGAATaGGAGCGATTTGAAGGACCT +
Preference number: 5 (lower is better)
Translates to: IIQNNLQPSKQLMHLLRDREDTE*ERFEGP
Trigger: AGGTCCTTCAAATCGCTCCAATTCAGTGTCCTCCCT...ATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGTATGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp AAGGTCTGTTCCTGTCTGATTTCTCATCATCGCTATCTTTGCGTTCTTCAGTCTGAATATCCTCAGAGGTaGCACTTATGCCGGACACAA +
Preference number: 5 (lower is better)
Translates to: KVCSCLISHHRYLCVLQSEYPQR*HLCRTQ
Trigger: TTGTGTCCGGCATAAGTGCAACCTCTGAGGATATTC...AGACTGAAGAACGCAAAGATAGCGATGATGAGAAATCAGACAGGAACAGACCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265956.8
CDS-3UTR CAA 90 bp TCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCTGATTAGGGTAAGAATGCCTTaGCTTGAATGCCTCCATTTC +
Preference number: 5 (lower is better)
Translates to: SSAFKAADAPSQRSVCLIRVRMP*LECLHF
Trigger: GAAATGGAGGCATTCAAGCAAAGGCATTCTTACCCT...AATCAGACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp ACCAAGGTCTGTTCCTGTCTGATTTCTCATCATCGCTATCTTTGCGTTCTTCAGAGGGTAAGAATGCCTTaGCTTGAATGCCTCCATTTC +
Preference number: 5 (lower is better)
Translates to: TKVCSCLISHHRYLCVLQRVRMP*LECLHF
Trigger: GAAATGGAGGCATTCAAGCAAAGGCATTCTTACCCT...CTGAAGAACGCAAAGATAGCGATGATGAGAAATCAGACAGGAACAGACCTTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR CAA 90 bp TCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCTGATTTCATCATCGCTATCTTaGCGTTCTTCAGTCTCTCCT +
Preference number: 5 (lower is better)
Translates to: SSAFKAADAPSQRSVCLISSSLS*RSSVSP
Trigger: AGGAGAGACTGAAGAACGCAAAGATAGCGATGATGA...AATCAGACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp ATGCAACTCAGAAAGGAAAGAGCCCAAAGACGAGAGAACCTGCTTGTTAGCTCACAAATTGATTCTCTGTaGCTTCGCAATCCATGCTGT +
Preference number: 5 (lower is better)
Translates to: MQLRKERAQRRENLLVSSQIDSL*LRNPCC
Trigger: ACAGCATGGATTGCGAAGCAACAGAGAATCAATTTG...TGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGCTCTTTCCTTTCTGAGTTGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp ATGCAACTCAGAAAGGAAAGAGCCCAAAGACGAGAGAACCTGCTTGTTAGCTCAATAAGCCGATCCAAATaGATTCTCTGTTGCTTCGCA +
Preference number: 5 (lower is better)
Translates to: MQLRKERAQRRENLLVSSISRSK*ILCCFA
Trigger: TGCGAAGCAACAGAGAATCAATTTGGATCGGCTTAT...TGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGCTCTTTCCTTTCTGAGTTGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp CACCACTATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCATTTCATAGTTTGCCATaGCTCCATCACTGGGGCTGG +
Preference number: 5 (lower is better)
Translates to: HHYSNPQCNSYLLSIRCSFHSLP*LHHWGW
Trigger: CCAGCCCCAGTGATGGAGCAATGGCAAACTATGAAA...TGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATAGTGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp GCCCAAAGACGAGAGAACCTGCTTGTTAGCTCATTAACCTGTTTAGTAAAGATCGTAAACCATTCCTTGTaGAATGGGTCAGCACTGGGA +
Preference number: 5 (lower is better)
Translates to: AQRRENLLVSSLTCLVKIVNHSL*NGSALG
Trigger: TCCCAGTGCTGACCCATTCAACAAGGAATGGTTTAC...GATCTTTACTAAACAGGTTAATGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp GCCCAAAGACGAGAGAACCTGCTTGTTAGCTCATTAACCTGTTTAGTAAAGATCCTGGTAAACCATTCCTaGTTGAATGGGTCAGCACTG +
Preference number: 5 (lower is better)
Translates to: AQRRENLLVSSLTCLVKILVNHS*LNGSAL
Trigger: CAGTGCTGACCCATTCAACAAGGAATGGTTTACCAG...GATCTTTACTAAACAGGTTAATGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp ACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTCTGGTAAACCATTCCTaGTTGAATGGGTCAGCACTG +
Preference number: 5 (lower is better)
Translates to: TKQSSAFKAADAPSQRSVLVNHS*LNGSAL
Trigger: CAGTGCTGACCCATTCAACAAGGAATGGTTTACCAG...AACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp CACCACTATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCAGGCACACACAGCGCATaGTTTCTTGAAGTTGAGCCA +
Preference number: 5 (lower is better)
Translates to: HHYSNPQCNSYLLSIRCSGTHSA*FLEVEP
Trigger: TGGCTCAACTTCAAGAAACAATGCGCTGTGTGTGCC...TGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATAGTGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp ATCATACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATGGCACACACAGCGCATaGTTTCTTGAAGTTGAGCCA +
Preference number: 5 (lower is better)
Translates to: IIQNNLQPSKQLMHLLRDGTHSA*FLEVEP
Trigger: TGGCTCAACTTCAAGAAACAATGCGCTGTGTGTGCC...ATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGTATGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp ATCATACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATGTGGTAAAGTATCGATaGGCCACTTCTTTGTCCCGC +
Preference number: 5 (lower is better)
Translates to: IIQNNLQPSKQLMHLLRDVVKYR*ATSLSR
Trigger: GCGGGACAAAGAAGTGGCCAATCGATACTTTACCAC...ATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGTATGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp GATGCACCTTCTCAGAGATCTGTTTGTCTGATTAACAGTCTGCTGCCTTGGTGGCTGATCTTCTTTTCTTaGCTCTCAAGCAGTAATCTC +
Preference number: 5 (lower is better)
Translates to: DAPSQRSVCLINSLLPWWLIFFS*LSSSNL
Trigger: GAGATTACTGCTTGAGAGCAAAGAAAAGAAGATCAG...CCACCAAGGCAGCAGACTGTTAATCAGACAAACAGATCTCTGAGAAGGTGCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp GCCCAAAGACGAGAGAACCTGCTTGTTAGCTCATTAACCTGTTTAGTAAAGATCAAGTATGTCCCCATCTaGATTAGGGTAGAAGGCGAG +
Preference number: 5 (lower is better)
Translates to: AQRRENLLVSSLTCLVKIKYVPI*IRVEGE
Trigger: CTCGCCTTCTACCCTAATCAAGATGGGGACATACTT...GATCTTTACTAAACAGGTTAATGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp GTAGTACTAGTCTCTACTTGGGGACAAGAAAATAGAATATGCAACTCAGAAAGGCTTGTGCTTGAAGCTTaGGTGTGCCTCCATGGCCAA +
Preference number: 5 (lower is better)
Translates to: VVLVSTWGQENRICNSERLVLEA*VCLHGQ
Trigger: TTGGCCATGGAGGCACACCAAAGCTTCAAGCACAAG...CCTTTCTGAGTTGCATATTCTATTTTCTTGTCCCCAAGTAGAGACTAGTACTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR CAA 90 bp ATGTCATGTATGGTAATCAGTCTATCTCCTAATGCAGGCTCACAAACTTCCACGGCCCATGTACAAGACTaGTGCTTGAAGCTTTGGTGT +
Preference number: 5 (lower is better)
Translates to: MSCMVISLSPNAGSQTSTAHVQD*CLKLWC
Trigger: ACACCAAAGCTTCAAGCACAAGTCTTGTACATGGGC...CGTGGAAGTTTGTGAGCCTGCATTAGGAGATAGACTGATTACCATACATGACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR CAA 90 bp ACACACGAAGTGAAACCAGACAGTGATGGCCCATGTACAAGACTTGTGCTTGAATGGAGGAAGAAACATTaGGGGAACAACTATTCCTCT +
Preference number: 5 (lower is better)
Translates to: THEVKPDSDGPCTRLVLEWRKKH*GNNYSS
Trigger: AGAGGAATAGTTGTTCCCCAAATGTTTCTTCCTCCA...TTCAAGCACAAGTCTTGTACATGGGCCATCACTGTCTGGTTTCACTTCGTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR CAA 90 bp GATGCACCTTCTCAGAGATCTGTTTGTCTGATTAACAGTCTGCTGCCTTGGTGGTATATACATATAATTTaGTGGTTGGGCACGGTGGCT +
Preference number: 5 (lower is better)
Translates to: DAPSQRSVCLINSLLPWWYIHII*WLGTVA
Trigger: AGCCACCGTGCCCAACCACAAAATTATATGTATATA...CCACCAAGGCAGCAGACTGTTAATCAGACAAACAGATCTCTGAGAAGGTGCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR CAA 90 bp GGAGCTCTGTCTGGGATTTCTGCAGTATATTATTTCGGAGGAGAAGAACCACCACAGGAGAGTATTAATTaGACAGAGGTGAATTCCCCT +
Preference number: 5 (lower is better)
Translates to: GALSGISAVYYFGGEEPPQESIN*TEVNSP
Trigger: AGGGGAATTCACCTCTGTCAAATTAATACTCTCCTG...TGGTGGTTCTTCTCCTCCGAAATAATATACTGCAGAAATCCCAGACAGAGCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR CAA 90 bp TCACCTGCTCCAAGATCTTCTCCTGATACCACTACCATTTTGGCTAAGTTAGGTGATGCCACACTCCTGTaGATACAATTCCACATTACG +
Preference number: 5 (lower is better)
Translates to: SPAPRSSPDTTTILAKLGDATLL*IQFHIT
Trigger: CGTAATGTGGAATTGTATCAACAGGAGTGTGGCATC...ACCTAACTTAGCCAAAATGGTAGTGGTATCAGGAGAAGATCTTGGAGCAGGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394084.5
CDS-3UTR CAA 90 bp CCTCCATTTCAGCTGGAGTTAAAACATGGGAACCAAAGTTTGGCAACCTGGCCTAGAGATTCTGGGGCTTaGCTTCTTATTGCTAATACA +
Preference number: 5 (lower is better)
Translates to: PPFQLELKHGNQSLATWPRDSGA*LLIANT
Trigger: TGTATTAGCAATAAGAAGCAAAGCCCCAGAATCTCT...AGGCCAGGTTGCCAAACTTTGGTTCCCATGTTTTAACTCCAGCTGAAATGGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497580.5
CDS-3UTR CAA 90 bp TTTACCCCCAAAATCAGAGCTGCACTCAGATCTCAGGTCTTCAATCTTATTGGGAGTCTTACAGAGGAGTaGAGACATTGGCTCTCTGAA +
Preference number: 5 (lower is better)
Translates to: FTPKIRAALRSQVFNLIGSLTEE*RHWLSE
Trigger: TTCAGAGAGCCAATGTCTCAACTCCTCTGTAAGACT...CCCAATAAGATTGAAGACCTGAGATCTGAGTGCAGCTCTGATTTTGGGGGTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497580.5
CDS TCA 90 bp CTAGCTTTGCTTCATTGGACTCCACCATTTCTTGAACTTTTTGCCTaGATCTATCTGAGCCCTTCTCTCCAAAGAGTTTTTCCTGCTGAG +
Preference number: 5 (lower is better)
Translates to: LALLHWTPPFLELFA*IYLSPSLQRVFPAE
Trigger: CTCAGCAGGAAAAACTCTTTGGAGAGAAGGGCTCAGATAGATTCAGGCAAAAAGTTCAAGAAATGGTGGAGTCCAATGAAGCAAAGCTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENST00000265956.8
ENST00000297933.11
ENST00000312123.13
ENST00000394083.6
ENST00000394084.5
ENST00000394104.6
ENST00000394105.6
ENST00000431329.5
ENST00000436712.2
ENST00000467750.5
ENST00000470056.5
ENST00000495955.5
ENST00000497580.5
CDS GCA 90 bp TGGAGCGATTTGAAGGACCTTCAGATATTCCTTCCAGATTATCACTaGAGAGGGAAAAGCGCAAGGTTTTATCAGGTTTACCATGGAGTT +
Preference number: 5 (lower is better)
Translates to: WSDLKDLQIFLPDYH*RGKSARFYQVYHGV
Trigger: AACTCCATGGTAAACCTGATAAAACCTTGCGCTTTTCCCTCTGCAGTGATAATCTGGAAGGAATATCTGAAGGTCCTTCAAATCGCTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000265956.8
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000431329.5
ENST00000467750.5
ENST00000470056.5
ENST00000495955.5
ENST00000497580.5
CDS GCA 90 bp ACTACTCAAATCTCTGTCATGATTATCACCTGTACTTTCATAGTTTaGCATTGCTCCATCACTGGGGCTGGTCCGTTTAATGGCATTCCT +
Preference number: 5 (lower is better)
Translates to: TTQISVMIITCTFIV*HCSITGAGPFNGIP
Trigger: AGGAATGCCATTAAACGGACCAGCCCCAGTGATGGAGCAATGGCAAACTATGAAAGTACAGGTGATAATCATGACAGAGATTTGAGTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394104.6
ENST00000495955.5
CDS CCA 90 bp GTGTATTGTAGGGAGTCATTTCTAAACTGCTACTTTTTCCTGGCTTaGCCGGGGGTAGGTTTGCCAATAAATTGTCAAGAGCCATTCTAT +
Preference number: 5 (lower is better)
Translates to: VYCRESFLNCYFFLA*PGVGLPINCQEPFY
Trigger: ATAGAATGGCTCTTGACAATTTATTGGCAAACCTACCCCCGGCCAAGCCAGGAAAAAGTAGCAGTTTAGAAATGACTCCCTACAATACAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENST00000265956.8
ENST00000297933.11
ENST00000312123.13
ENST00000394083.6
ENST00000394084.5
ENST00000394104.6
ENST00000394105.6
ENST00000431329.5
ENST00000436712.2
ENST00000467750.5
ENST00000470056.5
ENST00000495955.5
ENST00000497580.5
CDS-3UTR CAA 90 bp TTTACCCCCAAAATCAGAGCTGCACTCAGATCTCAGGTCTTCAATCTTATTGGGTCTTGCATGATGCAATaGCCATACAGGGAGGTAAAA +
Preference number: 5 (lower is better)
Translates to: FTPKIRAALRSQVFNLIGSCMMQ*PYREVK
Trigger: TTTTACCTCCCTGTATGGCAATTGCATCATGCAAGA...CCCAATAAGATTGAAGACCTGAGATCTGAGTGCAGCTCTGATTTTGGGGGTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR CAA 90 bp CAAGGTCTGTTCCTGTCTGATTTCTCATCATCGCTATCTTTGCGTTCTTCAGTCAACCTCTCAATTAGCTaGTTTGGATCTGTTTCCAGG +
Preference number: 5 (lower is better)
Translates to: QGLFLSDFSSSLSLRSSVNLSIS*FGSVSR
Trigger: CCTGGAAACAGATCCAAACAAGCTAATTGAGAGGTT...GACTGAAGAACGCAAAGATAGCGATGATGAGAAATCAGACAGGAACAGACCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR CAA 90 bp TCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCTGATTCCATATTGTTCTGGATaGACAACTGCAGGACAAATG +
Preference number: 5 (lower is better)
Translates to: SSAFKAADAPSQRSVCLIPYCSG*TTAGQM
Trigger: CATTTGTCCTGCAGTTGTCAATCCAGAACAATATGG...AATCAGACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp CACCACTATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCAAATCCTTCCAGAAGATaGACGGAAGACAATGGAGGG +
Preference number: 5 (lower is better)
Translates to: HHYSNPQCNSYLLSIRCSNPSRR*TEDNGG
Trigger: CCCTCCATTGTCTTCCGTCAATCTTCTGGAAGGATT...TGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATAGTGGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp GTAGTACTAGTCTCTACTTGGGGACAAGAAAATAGAATATGCAACTCAGAAAGGTGGCCGGGGGTAGGTTaGCCAATAAATTGTCAAGAG +
Preference number: 5 (lower is better)
Translates to: VVLVSTWGQENRICNSERWPGVG*PINCQE
Trigger: CTCTTGACAATTTATTGGCAAACCTACCCCCGGCCA...CCTTTCTGAGTTGCATATTCTATTTTCTTGTCCCCAAGTAGAGACTAGTACTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp GTAGTACTAGTCTCTACTTGGGGACAAGAAAATAGAATATGCAACTCAGAAAGGTATTTGCTGGAGTGGTaGCTGGAGATAGCTGAGGTG +
Preference number: 5 (lower is better)
Translates to: VVLVSTWGQENRICNSERYLLEW*LEIAEV
Trigger: CACCTCAGCTATCTCCAGCAACCACTCCAGCAAATA...CCTTTCTGAGTTGCATATTCTATTTTCTTGTCCCCAAGTAGAGACTAGTACTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp TGCCTTAGCATTCATCTGAGTGGAACCACTTTCTACACCCTCAAAGTAGCTAGAATCGATTCTTTTTATTaGCTGGAGTGGTTGCTGGAG +
Preference number: 5 (lower is better)
Translates to: CLSIHLSGTTFYTLKVARIDSFY*LEWLLE
Trigger: CTCCAGCAACCACTCCAGCAAATAAAAAGAATCGAT...TCTAGCTACTTTGAGGGTGTAGAAAGTGGTTCCACTCAGATGAATGCTAAGGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497580.5
CDS-3UTR CAA 90 bp TTTACCCCCAAAATCAGAGCTGCACTCAGATCTCAGGTCTTCAATCTTATTGGGCTGAATTGGAGCGATTaGAAGGACCTTCAGATATTC +
Preference number: 5 (lower is better)
Translates to: FTPKIRAALRSQVFNLIGLNWSD*KDLQIF
Trigger: GAATATCTGAAGGTCCTTCAAATCGCTCCAATTCAG...CCCAATAAGATTGAAGACCTGAGATCTGAGTGCAGCTCTGATTTTGGGGGTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR CAA 90 bp TCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCTGATTCTGAATTGGAGCGATTaGAAGGACCTTCAGATATTC +
Preference number: 5 (lower is better)
Translates to: SSAFKAADAPSQRSVCLILNWSD*KDLQIF
Trigger: GAATATCTGAAGGTCCTTCAAATCGCTCCAATTCAG...AATCAGACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp GTAGTACTAGTCTCTACTTGGGGACAAGAAAATAGAATATGCAACTCAGAAAGGAGGGAGGACACTGAATaGGAGCGATTTGAAGGACCT +
Preference number: 5 (lower is better)
Translates to: VVLVSTWGQENRICNSERREDTE*ERFEGP
Trigger: AGGTCCTTCAAATCGCTCCAATTCAGTGTCCTCCCT...CCTTTCTGAGTTGCATATTCTATTTTCTTGTCCCCAAGTAGAGACTAGTACTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp ATCATACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATGAATATCCTCAGAGGTaGCACTTATGCCGGACACAA +
Preference number: 5 (lower is better)
Translates to: IIQNNLQPSKQLMHLLRDEYPQR*HLCRTQ
Trigger: TTGTGTCCGGCATAAGTGCAACCTCTGAGGATATTC...ATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGTATGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp ACACACGAAGTGAAACCAGACAGTGATGGCCCATGTACAAGACTTGTGCTTGAAAGGTCTTCAATCTTATaGGGAATATCCTCAGAGGTT +
Preference number: 5 (lower is better)
Translates to: THEVKPDSDGPCTRLVLERSSIL*GISSEV
Trigger: AACCTCTGAGGATATTCCCAATAAGATTGAAGACCT...TTCAAGCACAAGTCTTGTACATGGGCCATCACTGTCTGGTTTCACTTCGTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR CAA 90 bp TATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCATTAATGCTTCAGTCTCTCCTCTaGAGGAGTCCTTACTCGGGG +
Preference number: 5 (lower is better)
Translates to: YSNPQCNSYLLSIRCSLMLQSLL*RSPYSG
Trigger: CCCCGAGTAAGGACTCCTCAAGAGGAGAGACTGAAG...CATTAATGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp ACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTCATCATCGCTATCTTaGCGTTCTTCAGTCTCTCCT +
Preference number: 5 (lower is better)
Translates to: TKQSSAFKAADAPSQRSVSSSLS*RSSVSP
Trigger: AGGAGAGACTGAAGAACGCAAAGATAGCGATGATGA...AACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp ATGTCATGTATGGTAATCAGTCTATCTCCTAATGCAGGCTCACAAACTTCCACGTCATCATCGCTATCTTaGCGTTCTTCAGTCTCTCCT +
Preference number: 5 (lower is better)
Translates to: MSCMVISLSPNAGSQTSTSSSLS*RSSVSP
Trigger: AGGAGAGACTGAAGAACGCAAAGATAGCGATGATGA...CGTGGAAGTTTGTGAGCCTGCATTAGGAGATAGACTGATTACCATACATGACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR CAA 90 bp TCACCTGCTCCAAGATCTTCTCCTGATACCACTACCATTTTGGCTAAGTTAGGTACAGAGCCAGACCCTTaGAGATTCCTAGAATGTATA +
Preference number: 5 (lower is better)
Translates to: SPAPRSSPDTTTILAKLGTEPDP*RFLECI
Trigger: TATACATTCTAGGAATCTCAAAGGGTCTGGCTCTGT...ACCTAACTTAGCCAAAATGGTAGTGGTATCAGGAGAAGATCTTGGAGCAGGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394084.5
CDS-3UTR CAA 90 bp TCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCTGATTATAAGCCGATCCAAATaGATTCTCTGTTGCTTCGCA +
Preference number: 5 (lower is better)
Translates to: SSAFKAADAPSQRSVCLIISRSK*ILCCFA
Trigger: TGCGAAGCAACAGAGAATCAATTTGGATCGGCTTAT...AATCAGACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp GCTTTGGTGTGCCTCCATGGCCAATTTTTCAGGCACCAAAACCCATTCCTGATTGTATCTTCCAAAATTTaGGCATGTTGGCAACATTCA +
Preference number: 5 (lower is better)
Translates to: ALVCLHGQFFRHQNPFLIVSSKI*ACWQHS
Trigger: TGAATGTTGCCAACATGCCAAAATTTTGGAAGATAC...AATCAGGAATGGGTTTTGGTGCCTGAAAAATTGGCCATGGAGGCACACCAAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR CAA 90 bp GATGCACCTTCTCAGAGATCTGTTTGTCTGATTAACAGTCTGCTGCCTTGGTGGGTATCTTCCAAAATTTaGGCATGTTGGCAACATTCA +
Preference number: 5 (lower is better)
Translates to: DAPSQRSVCLINSLLPWWVSSKI*ACWQHS
Trigger: TGAATGTTGCCAACATGCCAAAATTTTGGAAGATAC...CCACCAAGGCAGCAGACTGTTAATCAGACAAACAGATCTCTGAGAAGGTGCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp TTGTATCCAGTGTCTATCACAGTGCCTCATGTGCAAGACACATCCACTCTCACACTCCTGAAATCCCAATaGCTTATACCCATCAACAAA +
Preference number: 5 (lower is better)
Translates to: LYPVSITVPHVQDTSTLTLLKSQ*LIPINK
Trigger: TTTGTTGATGGGTATAAGCAATTGGGATTTCAGGAG...TGTGAGAGTGGATGTGTCTTGCACATGAGGCACTGTGATAGACACTGGATACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394084.5
CDS-3UTR CAA 90 bp ACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTCTGTACTTTCATAGTTaGCCATTGCTCCATCACTGG +
Preference number: 5 (lower is better)
Translates to: TKQSSAFKAADAPSQRSVLYFHS*PLLHHW
Trigger: CCAGTGATGGAGCAATGGCAAACTATGAAAGTACAG...AACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp CACCACTATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCAGTAAACCATTCCTTGTaGAATGGGTCAGCACTGGGA +
Preference number: 5 (lower is better)
Translates to: HHYSNPQCNSYLLSIRCSVNHSL*NGSALG
Trigger: TCCCAGTGCTGACCCATTCAACAAGGAATGGTTTAC...TGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATAGTGGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp ATCATACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATGTAAACCATTCCTTGTaGAATGGGTCAGCACTGGGA +
Preference number: 5 (lower is better)
Translates to: IIQNNLQPSKQLMHLLRDVNHSL*NGSALG
Trigger: TCCCAGTGCTGACCCATTCAACAAGGAATGGTTTAC...ATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGTATGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp CACCACTATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCACTGGTAAACCATTCCTaGTTGAATGGGTCAGCACTG +
Preference number: 5 (lower is better)
Translates to: HHYSNPQCNSYLLSIRCSLVNHS*LNGSAL
Trigger: CAGTGCTGACCCATTCAACAAGGAATGGTTTACCAG...TGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATAGTGGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp GTAGTACTAGTCTCTACTTGGGGACAAGAAAATAGAATATGCAACTCAGAAAGGGGCACACACAGCGCATaGTTTCTTGAAGTTGAGCCA +
Preference number: 5 (lower is better)
Translates to: VVLVSTWGQENRICNSERGTHSA*FLEVEP
Trigger: TGGCTCAACTTCAAGAAACAATGCGCTGTGTGTGCC...CCTTTCTGAGTTGCATATTCTATTTTCTTGTCCCCAAGTAGAGACTAGTACTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp GTAGTACTAGTCTCTACTTGGGGACAAGAAAATAGAATATGCAACTCAGAAAGGCGATTGGCCACTTCTTaGTCCCGCAAAACTCTTTGC +
Preference number: 5 (lower is better)
Translates to: VVLVSTWGQENRICNSERRLATS*SRKTLC
Trigger: GCAAAGAGTTTTGCGGGACAAAGAAGTGGCCAATCG...CCTTTCTGAGTTGCATATTCTATTTTCTTGTCCCCAAGTAGAGACTAGTACTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp GTAGTACTAGTCTCTACTTGGGGACAAGAAAATAGAATATGCAACTCAGAAAGGGTGGTAAAGTATCGATaGGCCACTTCTTTGTCCCGC +
Preference number: 5 (lower is better)
Translates to: VVLVSTWGQENRICNSERVVKYR*ATSLSR
Trigger: GCGGGACAAAGAAGTGGCCAATCGATACTTTACCAC...CCTTTCTGAGTTGCATATTCTATTTTCTTGTCCCCAAGTAGAGACTAGTACTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp ATGCAACTCAGAAAGGAAAGAGCCCAAAGACGAGAGAACCTGCTTGTTAGCTCACTGATCTTCTTTTCTTaGCTCTCAAGCAGTAATCTC +
Preference number: 5 (lower is better)
Translates to: MQLRKERAQRRENLLVSSLIFFS*LSSSNL
Trigger: GAGATTACTGCTTGAGAGCAAAGAAAAGAAGATCAG...TGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGCTCTTTCCTTTCTGAGTTGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp GCTTTGGTGTGCCTCCATGGCCAATTTTTCAGGCACCAAAACCCATTCCTGATTGAGTTTCTGAAAGTCTaGAATGAATTCCCTGATCTT +
Preference number: 5 (lower is better)
Translates to: ALVCLHGQFFRHQNPFLIEFLKV*NEFPDL
Trigger: AAGATCAGGGAATTCATTCAAGACTTTCAGAAACTC...AATCAGGAATGGGTTTTGGTGCCTGAAAAATTGGCCATGGAGGCACACCAAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR CAA 90 bp ATCATACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATAAGTATGTCCCCATCTaGATTAGGGTAGAAGGCGAG +
Preference number: 5 (lower is better)
Translates to: IIQNNLQPSKQLMHLLRDKYVPI*IRVEGE
Trigger: CTCGCCTTCTACCCTAATCAAGATGGGGACATACTT...ATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGTATGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp TGCTTAACATTTACTGAATCAAAGGCTGAAGTAAATGGACTCTCATCTAGGTCTAACACAGCCCCCGTATaGGGGCTGAGATTGTTCTCT +
Preference number: 5 (lower is better)
Translates to: CLTFTESKAEVNGLSSRSNTAPV*GLRLFS
Trigger: AGAGAACAATCTCAGCCCCAATACGGGGGCTGTGTT...AGACCTAGATGAGAGTCCATTTACTTCAGCCTTTGATTCAGTAAATGTTAAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR CAA 90 bp AAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTGAAGGACCATGGAGTTaGTTTTCATCAACAGGGACA +
Preference number: 5 (lower is better)
Translates to: KQSSAFKAADAPSQRSVCEGPWS*FSSTGT
Trigger: TGTCCCTGTTGATGAAAACAAACTCCATGGTCCTTC...ACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394083.6
CDS GCA 90 bp AATAGGAGCATCGGAAATTATTCCATATTGTTCTGGATTGACAACTaGAGGACAAATGAAGCAGGCCAACAGGAGATCAGTACACATTGC +
Preference number: 5 (lower is better)
Translates to: NRSIGNYSILFWIDN*RTNEAGQQEISTHC
Trigger: GCAATGTGTACTGATCTCCTGTTGGCCTGCTTCATTTGTCCTGCAGTTGTCAATCCAGAACAATATGGAATAATTTCCGATGCTCCTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000265956.8
ENST00000297933.11
ENST00000312123.13
ENST00000394083.6
ENST00000394084.5
ENST00000394104.6
ENST00000394105.6
ENST00000431329.5
ENST00000436712.2
ENST00000467750.5
ENST00000470056.5
ENST00000495955.5
ENST00000497580.5
CDS GCA 90 bp GCTTCAGCACTGGTTATGATAAGCCGATCCAAATTGATTCTCTGTTaGTTCGCAATCCATGCTGTACGATACAACTTTTCAGCTGTCTTA +
Preference number: 5 (lower is better)
Translates to: ASALVMISRSKLILC*FAIHAVRYNFSAVL
Trigger: TAAGACAGCTGAAAAGTTGTATCGTACAGCATGGATTGCGAAGCAACAGAGAATCAATTTGGATCGGCTTATCATAACCAGTGCTGAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000297933.11
ENST00000312123.13
ENST00000394083.6
ENST00000394084.5
ENST00000394104.6
ENST00000394105.6
ENST00000461379.5
ENST00000467750.5
ENST00000470056.5
ENST00000495955.5
ENST00000497580.5
CDS GCA 90 bp CAAATCTCTGTCATGATTATCACCTGTACTTTCATAGTTTGCCATTaGTCCATCACTGGGGCTGGTCCGTTTAATGGCATTCCTGTATTT +
Preference number: 5 (lower is better)
Translates to: QISVMIITCTFIVCH*SITGAGPFNGIPVF
Trigger: AAATACAGGAATGCCATTAAACGGACCAGCCCCAGTGATGGAGCAATGGCAAACTATGAAAGTACAGGTGATAATCATGACAGAGATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394104.6
ENST00000495955.5
CDS-3UTR CAA 90 bp AAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTTCTTGCATGATGCAATaGCCATACAGGGAGGTAAAA +
Preference number: 5 (lower is better)
Translates to: KQSSAFKAADAPSQRSVCSCMMQ*PYREVK
Trigger: TTTTACCTCCCTGTATGGCAATTGCATCATGCAAGA...ACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp ACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTCTTGCATGATGCAATaGCCATACAGGGAGGTAAAA +
Preference number: 5 (lower is better)
Translates to: TKQSSAFKAADAPSQRSVSCMMQ*PYREVK
Trigger: TTTTACCTCCCTGTATGGCAATTGCATCATGCAAGA...AACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp TCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCTGATTGTAGCTTTCATCTTCTaGCATGATGCAATTGCCATA +
Preference number: 5 (lower is better)
Translates to: SSAFKAADAPSQRSVCLIVAFIF*HDAIAI
Trigger: TATGGCAATTGCATCATGCAAGAAGATGAAAGCTAC...AATCAGACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp TTTACCCCCAAAATCAGAGCTGCACTCAGATCTCAGGTCTTCAATCTTATTGGGTCTCAATTAGCTTGTTaGGATCTGTTTCCAGGTGAT +
Preference number: 5 (lower is better)
Translates to: FTPKIRAALRSQVFNLIGSQLAC*DLFPGD
Trigger: ATCACCTGGAAACAGATCCAAACAAGCTAATTGAGA...CCCAATAAGATTGAAGACCTGAGATCTGAGTGCAGCTCTGATTTTGGGGGTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR CAA 90 bp TCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCTGATTTCTCAATTAGCTTGTTaGGATCTGTTTCCAGGTGAT +
Preference number: 5 (lower is better)
Translates to: SSAFKAADAPSQRSVCLISQLAC*DLFPGD
Trigger: ATCACCTGGAAACAGATCCAAACAAGCTAATTGAGA...AATCAGACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp AAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTAACCTCTCAATTAGCTaGTTTGGATCTGTTTCCAGG +
Preference number: 5 (lower is better)
Translates to: KQSSAFKAADAPSQRSVCNLSIS*FGSVSR
Trigger: CCTGGAAACAGATCCAAACAAGCTAATTGAGAGGTT...ACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp ACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTAACCTCTCAATTAGCTaGTTTGGATCTGTTTCCAGG +
Preference number: 5 (lower is better)
Translates to: TKQSSAFKAADAPSQRSVNLSIS*FGSVSR
Trigger: CCTGGAAACAGATCCAAACAAGCTAATTGAGAGGTT...AACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp ACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTCCATATTGTTCTGGATaGACAACTGCAGGACAAATG +
Preference number: 5 (lower is better)
Translates to: TKQSSAFKAADAPSQRSVPYCSG*TTAGQM
Trigger: CATTTGTCCTGCAGTTGTCAATCCAGAACAATATGG...AACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp ACGCTTAGTATGCTGAAGGGTACTAGTCTCTTCTTGCTCTCCCTAACTAAACTACCATATTGTTCTGGATaGACAACTGCAGGACAAATG +
Preference number: 5 (lower is better)
Translates to: TLSMLKGTSLFLLSLTKLPYCSG*TTAGQM
Trigger: CATTTGTCCTGCAGTTGTCAATCCAGAACAATATGG...TAGTTTAGTTAGGGAGAGCAAGAAGAGACTAGTACCCTTCAGCATACTAAGCGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394084.5
CDS-3UTR CAA 90 bp AAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCCATATTGTTCTGGATaGACAACTGCAGGACAAATG +
Preference number: 5 (lower is better)
Translates to: KQSSAFKAADAPSQRSVCPYCSG*TTAGQM
Trigger: CATTTGTCCTGCAGTTGTCAATCCAGAACAATATGG...ACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp CCAAAATCAGAGCTGCACTCAGATCTCAGGTCTTCAATCTTATTGGGAATATCCCCATATTGTTCTGGATaGACAACTGCAGGACAAATG +
Preference number: 5 (lower is better)
Translates to: PKSELHSDLRSSILLGISPYCSG*TTAGQM
Trigger: CATTTGTCCTGCAGTTGTCAATCCAGAACAATATGG...GGATATTCCCAATAAGATTGAAGACCTGAGATCTGAGTGCAGCTCTGATTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265956.8
ENST00000497580.5
CDS-3UTR CAA 90 bp TATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCATTAATGTTCCAAGGCTGCTCTTaGTTCGGGGATCTCCCTCTT +
Preference number: 5 (lower is better)
Translates to: YSNPQCNSYLLSIRCSLMFQGCS*FGDLPL
Trigger: AAGAGGGAGATCCCCGAACAAAGAGCAGCCTTGGAA...CATTAATGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp AAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTATCGATTCTTTTTATTaGCTGGAGTGGTTGCTGGAG +
Preference number: 5 (lower is better)
Translates to: KQSSAFKAADAPSQRSVCIDSFY*LEWLLE
Trigger: CTCCAGCAACCACTCCAGCAAATAAAAAGAATCGAT...ACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp ACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTATCGATTCTTTTTATTaGCTGGAGTGGTTGCTGGAG +
Preference number: 5 (lower is better)
Translates to: TKQSSAFKAADAPSQRSVIDSFY*LEWLLE
Trigger: CTCCAGCAACCACTCCAGCAAATAAAAAGAATCGAT...AACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp TGCTTAACATTTACTGAATCAAAGGCTGAAGTAAATGGACTCTCATCTAGGTCTCAACACCTCTTCTGGTaGCACCTCCTGAATGGTTTC +
Preference number: 5 (lower is better)
Translates to: CLTFTESKAEVNGLSSRSQHLFW*HLLNGF
Trigger: GAAACCATTCAGGAGGTGCAACCAGAAGAGGTGTTG...AGACCTAGATGAGAGTCCATTTACTTCAGCCTTTGATTCAGTAAATGTTAAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR CAA 90 bp ACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTGGTTTACCATGGAGTTaGTTTTCATCAACAGGGACA +
Preference number: 5 (lower is better)
Translates to: TKQSSAFKAADAPSQRSVGLPWS*FSSTGT
Trigger: TGTCCCTGTTGATGAAAACAAACTCCATGGTAAACC...AACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp GCCCAAAGACGAGAGAACCTGCTTGTTAGCTCATTAACCTGTTTAGTAAAGATCGGTTTACCATGGAGTTaGTTTTCATCAACAGGGACA +
Preference number: 5 (lower is better)
Translates to: AQRRENLLVSSLTCLVKIGLPWS*FSSTGT
Trigger: TGTCCCTGTTGATGAAAACAAACTCCATGGTAAACC...GATCTTTACTAAACAGGTTAATGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp AGTAATCGCAAATACCTCATCACTGTTAATCCACTTACTAAAAATCCTTTGGGCAGGGAGGACACTGAATaGGAGCGATTTGAAGGACCT +
Preference number: 5 (lower is better)
Translates to: SNRKYLITVNPLTKNPLGREDTE*ERFEGP
Trigger: AGGTCCTTCAAATCGCTCCAATTCAGTGTCCTCCCT...GCCCAAAGGATTTTTAGTAAGTGGATTAACAGTGATGAGGTATTTGCGATTACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR CAA 90 bp GTAGTACTAGTCTCTACTTGGGGACAAGAAAATAGAATATGCAACTCAGAAAGGGAATATCCTCAGAGGTaGCACTTATGCCGGACACAA +
Preference number: 5 (lower is better)
Translates to: VVLVSTWGQENRICNSEREYPQR*HLCRTQ
Trigger: TTGTGTCCGGCATAAGTGCAACCTCTGAGGATATTC...CCTTTCTGAGTTGCATATTCTATTTTCTTGTCCCCAAGTAGAGACTAGTACTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp TCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCTGATTAGGTCTTCAATCTTATaGGGAATATCCTCAGAGGTT +
Preference number: 5 (lower is better)
Translates to: SSAFKAADAPSQRSVCLIRSSIL*GISSEV
Trigger: AACCTCTGAGGATATTCCCAATAAGATTGAAGACCT...AATCAGACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp ATCATACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATAGGGTAAGAATGCCTTaGCTTGAATGCCTCCATTTC +
Preference number: 5 (lower is better)
Translates to: IIQNNLQPSKQLMHLLRDRVRMP*LECLHF
Trigger: GAAATGGAGGCATTCAAGCAAAGGCATTCTTACCCT...ATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGTATGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp CACCACTATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCATCATCATCGCTATCTTaGCGTTCTTCAGTCTCTCCT +
Preference number: 5 (lower is better)
Translates to: HHYSNPQCNSYLLSIRCSSSSLS*RSSVSP
Trigger: AGGAGAGACTGAAGAACGCAAAGATAGCGATGATGA...TGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATAGTGGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp ACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTCAAATTGATTCTCTGTaGCTTCGCAATCCATGCTGT +
Preference number: 5 (lower is better)
Translates to: TKQSSAFKAADAPSQRSVQIDSL*LRNPCC
Trigger: ACAGCATGGATTGCGAAGCAACAGAGAATCAATTTG...AACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp AAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTATAAGCCGATCCAAATaGATTCTCTGTTGCTTCGCA +
Preference number: 5 (lower is better)
Translates to: KQSSAFKAADAPSQRSVCISRSK*ILCCFA
Trigger: TGCGAAGCAACAGAGAATCAATTTGGATCGGCTTAT...ACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp AAGGGTACTAGTCTCTTCTTGCTCTCCCTAACTAAACTATCAACAGCCAACTTGATAAGCCGATCCAAATaGATTCTCTGTTGCTTCGCA +
Preference number: 5 (lower is better)
Translates to: KGTSLFLLSLTKLSTANLISRSK*ILCCFA
Trigger: TGCGAAGCAACAGAGAATCAATTTGGATCGGCTTAT...CAAGTTGGCTGTTGATAGTTTAGTTAGGGAGAGCAAGAAGAGACTAGTACCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394084.5
CDS-3UTR CAA 90 bp ACAAAGTGCAAACAGACTTCACCTGCTCCAAGATCTTCTCCTGATACCACTACCGTATCTTCCAAAATTTaGGCATGTTGGCAACATTCA +
Preference number: 5 (lower is better)
Translates to: TKCKQTSPAPRSSPDTTTVSSKI*ACWQHS
Trigger: TGAATGTTGCCAACATGCCAAAATTTTGGAAGATAC...GGTAGTGGTATCAGGAGAAGATCTTGGAGCAGGTGAAGTCTGTTTGCACTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394084.5
CDS-3UTR CAA 90 bp TCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCTGATTCTCCTGAAATCCCAATaGCTTATACCCATCAACAAA +
Preference number: 5 (lower is better)
Translates to: SSAFKAADAPSQRSVCLILLKSQ*LIPINK
Trigger: TTTGTTGATGGGTATAAGCAATTGGGATTTCAGGAG...AATCAGACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp CAAGGTCTGTTCCTGTCTGATTTCTCATCATCGCTATCTTTGCGTTCTTCAGTCCTCCTGAAATCCCAATaGCTTATACCCATCAACAAA +
Preference number: 5 (lower is better)
Translates to: QGLFLSDFSSSLSLRSSVLLKSQ*LIPINK
Trigger: TTTGTTGATGGGTATAAGCAATTGGGATTTCAGGAG...GACTGAAGAACGCAAAGATAGCGATGATGAGAAATCAGACAGGAACAGACCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497580.5
CDS-3UTR CAA 90 bp ATCATACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTACTTTCATAGTTaGCCATTGCTCCATCACTGG +
Preference number: 5 (lower is better)
Translates to: IIQNNLQPSKQLMHLLRDLYFHS*PLLHHW
Trigger: CCAGTGATGGAGCAATGGCAAACTATGAAAGTACAG...ATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGTATGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp CACCACTATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCACTGTACTTTCATAGTTaGCCATTGCTCCATCACTGG +
Preference number: 5 (lower is better)
Translates to: HHYSNPQCNSYLLSIRCSLYFHS*PLLHHW
Trigger: CCAGTGATGGAGCAATGGCAAACTATGAAAGTACAG...TGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATAGTGGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp TGCTTAACATTTACTGAATCAAAGGCTGAAGTAAATGGACTCTCATCTAGGTCTCGATTGGCCACTTCTTaGTCCCGCAAAACTCTTTGC +
Preference number: 5 (lower is better)
Translates to: CLTFTESKAEVNGLSSRSRLATS*SRKTLC
Trigger: GCAAAGAGTTTTGCGGGACAAAGAAGTGGCCAATCG...AGACCTAGATGAGAGTCCATTTACTTCAGCCTTTGATTCAGTAAATGTTAAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR CAA 90 bp AGTAATCGCAAATACCTCATCACTGTTAATCCACTTACTAAAAATCCTTTGGGCCGATTGGCCACTTCTTaGTCCCGCAAAACTCTTTGC +
Preference number: 5 (lower is better)
Translates to: SNRKYLITVNPLTKNPLGRLATS*SRKTLC
Trigger: GCAAAGAGTTTTGCGGGACAAAGAAGTGGCCAATCG...GCCCAAAGGATTTTTAGTAAGTGGATTAACAGTGATGAGGTATTTGCGATTACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR CAA 90 bp ATGCAACTCAGAAAGGAAAGAGCCCAAAGACGAGAGAACCTGCTTGTTAGCTCAGAGTTTCTGAAAGTCTaGAATGAATTCCCTGATCTT +
Preference number: 5 (lower is better)
Translates to: MQLRKERAQRRENLLVSSEFLKV*NEFPDL
Trigger: AAGATCAGGGAATTCATTCAAGACTTTCAGAAACTC...TGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGCTCTTTCCTTTCTGAGTTGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp TCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCTGATTACATTCACTGAATTCTaGGTCTGTGCATTCAATGTG +
Preference number: 5 (lower is better)
Translates to: SSAFKAADAPSQRSVCLITFTEF*VCAFNV
Trigger: CACATTGAATGCACAGACCAAGAATTCAGTGAATGT...AATCAGACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR CAA 90 bp ATGTCATGTATGGTAATCAGTCTATCTCCTAATGCAGGCTCACAAACTTCCACGAACCATGCAGCACATTaGCAATCCCTTAGAAAACCT +
Preference number: 5 (lower is better)
Translates to: MSCMVISLSPNAGSQTSTNHAAH*QSLRKP
Trigger: AGGTTTTCTAAGGGATTGCAAATGTGCTGCATGGTT...CGTGGAAGTTTGTGAGCCTGCATTAGGAGATAGACTGATTACCATACATGACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR CAA 90 bp TTGTATCCAGTGTCTATCACAGTGCCTCATGTGCAAGACACATCCACTCTCACACACTTTTTCCTCATCTaGTTTACTTTGTCTAACTCC +
Preference number: 5 (lower is better)
Translates to: LYPVSITVPHVQDTSTLTHFFLI*FTLSNS
Trigger: GGAGTTAGACAAAGTAAACAAGATGAGGAAAAAGTG...TGTGAGAGTGGATGTGTCTTGCACATGAGGCACTGTGATAGACACTGGATACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394084.5
CDS-3UTR CAA 90 bp AAGCTCTGCCTTAGCATTCATCTGAGTGGAACCACTTTCTACACCCTCAAAGTAGGGCTTTGCTTCTTATaGCTAATACAGCGTTCTAAT +
Preference number: 5 (lower is better)
Translates to: KLCLSIHLSGTTFYTLKVGLCFL*LIQRSN
Trigger: ATTAGAACGCTGTATTAGCAATAAGAAGCAAAGCCC...TACTTTGAGGGTGTAGAAAGTGGTTCCACTCAGATGAATGCTAAGGCAGAGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497580.5
CDS-3UTR CAA 90 bp ACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTGTAGCTTTCATCTTCTaGCATGATGCAATTGCCATA +
Preference number: 5 (lower is better)
Translates to: TKQSSAFKAADAPSQRSVVAFIF*HDAIAI
Trigger: TATGGCAATTGCATCATGCAAGAAGATGAAAGCTAC...AACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp AAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTTCTCAATTAGCTTGTTaGGATCTGTTTCCAGGTGAT +
Preference number: 5 (lower is better)
Translates to: KQSSAFKAADAPSQRSVCSQLAC*DLFPGD
Trigger: ATCACCTGGAAACAGATCCAAACAAGCTAATTGAGA...ACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp CACCACTATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCAAACCTCTCAATTAGCTaGTTTGGATCTGTTTCCAGG +
Preference number: 5 (lower is better)
Translates to: HHYSNPQCNSYLLSIRCSNLSIS*FGSVSR
Trigger: CCTGGAAACAGATCCAAACAAGCTAATTGAGAGGTT...TGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATAGTGGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp CACCACTATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCACCATATTGTTCTGGATaGACAACTGCAGGACAAATG +
Preference number: 5 (lower is better)
Translates to: HHYSNPQCNSYLLSIRCSPYCSG*TTAGQM
Trigger: CATTTGTCCTGCAGTTGTCAATCCAGAACAATATGG...TGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATAGTGGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp ATCATACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCCATATTGTTCTGGATaGACAACTGCAGGACAAATG +
Preference number: 5 (lower is better)
Translates to: IIQNNLQPSKQLMHLLRDPYCSG*TTAGQM
Trigger: CATTTGTCCTGCAGTTGTCAATCCAGAACAATATGG...ATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGTATGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp AACACTTTTTCCTCATCTTGTTTACTTTGTCTAACTCCCATTCATCACAAAGTGTGGCCGGGGGTAGGTTaGCCAATAAATTGTCAAGAG +
Preference number: 5 (lower is better)
Translates to: NTFSSSCLLCLTPIHHKVWPGVG*PINCQE
Trigger: CTCTTGACAATTTATTGGCAAACCTACCCCCGGCCA...CACTTTGTGATGAATGGGAGTTAGACAAAGTAAACAAGATGAGGAAAAAGTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000394084.5
CDS-3UTR CAA 90 bp CACCACTATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCAATCGATTCTTTTTATTaGCTGGAGTGGTTGCTGGAG +
Preference number: 5 (lower is better)
Translates to: HHYSNPQCNSYLLSIRCSIDSFY*LEWLLE
Trigger: CTCCAGCAACCACTCCAGCAAATAAAAAGAATCGAT...TGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATAGTGGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp CACCACTATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCAGGTTTACCATGGAGTTaGTTTTCATCAACAGGGACA +
Preference number: 5 (lower is better)
Translates to: HHYSNPQCNSYLLSIRCSGLPWS*FSSTGT
Trigger: TGTCCCTGTTGATGAAAACAAACTCCATGGTAAACC...TGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATAGTGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp ATCATACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATGGTTTACCATGGAGTTaGTTTTCATCAACAGGGACA +
Preference number: 5 (lower is better)
Translates to: IIQNNLQPSKQLMHLLRDGLPWS*FSSTGT
Trigger: TGTCCCTGTTGATGAAAACAAACTCCATGGTAAACC...ATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGTATGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp TGCTTAACATTTACTGAATCAAAGGCTGAAGTAAATGGACTCTCATCTAGGTCTGAATATCCTCAGAGGTaGCACTTATGCCGGACACAA +
Preference number: 5 (lower is better)
Translates to: CLTFTESKAEVNGLSSRSEYPQR*HLCRTQ
Trigger: TTGTGTCCGGCATAAGTGCAACCTCTGAGGATATTC...AGACCTAGATGAGAGTCCATTTACTTCAGCCTTTGATTCAGTAAATGTTAAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR CAA 90 bp GCCCAAAGACGAGAGAACCTGCTTGTTAGCTCATTAACCTGTTTAGTAAAGATCAGGTCTTCAATCTTATaGGGAATATCCTCAGAGGTT +
Preference number: 5 (lower is better)
Translates to: AQRRENLLVSSLTCLVKIRSSIL*GISSEV
Trigger: AACCTCTGAGGATATTCCCAATAAGATTGAAGACCT...GATCTTTACTAAACAGGTTAATGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp GTAGTACTAGTCTCTACTTGGGGACAAGAAAATAGAATATGCAACTCAGAAAGGAGGGTAAGAATGCCTTaGCTTGAATGCCTCCATTTC +
Preference number: 5 (lower is better)
Translates to: VVLVSTWGQENRICNSERRVRMP*LECLHF
Trigger: GAAATGGAGGCATTCAAGCAAAGGCATTCTTACCCT...CCTTTCTGAGTTGCATATTCTATTTTCTTGTCCCCAAGTAGAGACTAGTACTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp ATCATACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATACAGAGCCAGACCCTTaGAGATTCCTAGAATGTATA +
Preference number: 5 (lower is better)
Translates to: IIQNNLQPSKQLMHLLRDTEPDP*RFLECI
Trigger: TATACATTCTAGGAATCTCAAAGGGTCTGGCTCTGT...ATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGTATGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000495955.5
CDS-3UTR CAA 90 bp CACCACTATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCAATAAGCCGATCCAAATaGATTCTCTGTTGCTTCGCA +
Preference number: 5 (lower is better)
Translates to: HHYSNPQCNSYLLSIRCSISRSK*ILCCFA
Trigger: TGCGAAGCAACAGAGAATCAATTTGGATCGGCTTAT...TGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATAGTGGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp TCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCTGATTGTATCTTCCAAAATTTaGGCATGTTGGCAACATTCA +
Preference number: 5 (lower is better)
Translates to: SSAFKAADAPSQRSVCLIVSSKI*ACWQHS
Trigger: TGAATGTTGCCAACATGCCAAAATTTTGGAAGATAC...AATCAGACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp AAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCTCCTGAAATCCCAATaGCTTATACCCATCAACAAA +
Preference number: 5 (lower is better)
Translates to: KQSSAFKAADAPSQRSVCLLKSQ*LIPINK
Trigger: TTTGTTGATGGGTATAAGCAATTGGGATTTCAGGAG...ACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp GTAGTACTAGTCTCTACTTGGGGACAAGAAAATAGAATATGCAACTCAGAAAGGCTGTACTTTCATAGTTaGCCATTGCTCCATCACTGG +
Preference number: 5 (lower is better)
Translates to: VVLVSTWGQENRICNSERLYFHS*PLLHHW
Trigger: CCAGTGATGGAGCAATGGCAAACTATGAAAGTACAG...CCTTTCTGAGTTGCATATTCTATTTTCTTGTCCCCAAGTAGAGACTAGTACTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp TGCTTAACATTTACTGAATCAAAGGCTGAAGTAAATGGACTCTCATCTAGGTCTCTGGTAAACCATTCCTaGTTGAATGGGTCAGCACTG +
Preference number: 5 (lower is better)
Translates to: CLTFTESKAEVNGLSSRSLVNHS*LNGSAL
Trigger: CAGTGCTGACCCATTCAACAAGGAATGGTTTACCAG...AGACCTAGATGAGAGTCCATTTACTTCAGCCTTTGATTCAGTAAATGTTAAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR CAA 90 bp AAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCTGATCTTCTTTTCTTaGCTCTCAAGCAGTAATCTC +
Preference number: 5 (lower is better)
Translates to: KQSSAFKAADAPSQRSVCLIFFS*LSSSNL
Trigger: GAGATTACTGCTTGAGAGCAAAGAAAAGAAGATCAG...ACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp TCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTCTGATTGAGTTTCTGAAAGTCTaGAATGAATTCCCTGATCTT +
Preference number: 5 (lower is better)
Translates to: SSAFKAADAPSQRSVCLIEFLKV*NEFPDL
Trigger: AAGATCAGGGAATTCATTCAAGACTTTCAGAAACTC...AATCAGACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp TATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCATTAATGTTCTTCACTCGCGTTTaGCCATATGACATCCTGGGC +
Preference number: 5 (lower is better)
Translates to: YSNPQCNSYLLSIRCSLMFFTRV*PYDILG
Trigger: GCCCAGGATGTCATATGGCAAAACGCGAGTGAAGAA...CATTAATGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp ACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTACATTCACTGAATTCTaGGTCTGTGCATTCAATGTG +
Preference number: 5 (lower is better)
Translates to: TKQSSAFKAADAPSQRSVTFTEF*VCAFNV
Trigger: CACATTGAATGCACAGACCAAGAATTCAGTGAATGT...AACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR CAA 90 bp AAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTTATATACATATAATTTaGTGGTTGGGCACGGTGGCT +
Preference number: 5 (lower is better)
Translates to: KQSSAFKAADAPSQRSVCYIHII*WLGTVA
Trigger: AGCCACCGTGCCCAACCACAAAATTATATGTATATA...ACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR CAA 90 bp GTAGTACTAGTCTCTACTTGGGGACAAGAAAATAGAATATGCAACTCAGAAAGGCTGAATTGGAGCGATTaGAAGGACCATGGAGTTTGT +
Preference number: 5 (lower is better)
Translates to: VVLVSTWGQENRICNSERLNWSD*KDHGVC
Trigger: ACAAACTCCATGGTCCTTCAAATCGCTCCAATTCAG...CCTTTCTGAGTTGCATATTCTATTTTCTTGTCCCCAAGTAGAGACTAGTACTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394083.6
CDS TCA 90 bp GATGGAGAGAACCTCTCAATTAGCTTGTTTGGATCTGTTTCCAGGTaGTCTTCATCTTCAACAAGCAGTTGCATAATTGGCTCATGTAAA +
Preference number: 5 (lower is better)
Translates to: DGENLSISLFGSVSR*SSSSTSSCIIGSCK
Trigger: TTTACATGAGCCAATTATGCAACTGCTTGTTGAAGATGAAGATCACCTGGAAACAGATCCAAACAAGCTAATTGAGAGGTTCTCTCCATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000265956.8
ENST00000297933.11
ENST00000312123.13
ENST00000394083.6
ENST00000394084.5
ENST00000394104.6
ENST00000394105.6
ENST00000431329.5
ENST00000436712.2
ENST00000467750.5
ENST00000470056.5
ENST00000495955.5
ENST00000497580.5
CDS-3UTR CAA 90 bp CACCACTATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCAGTAGCTTTCATCTTCTaGCATGATGCAATTGCCATA +
Preference number: 5 (lower is better)
Translates to: HHYSNPQCNSYLLSIRCSVAFIF*HDAIAI
Trigger: TATGGCAATTGCATCATGCAAGAAGATGAAAGCTAC...TGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATAGTGGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp ATCATACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATTCTCAATTAGCTTGTTaGGATCTGTTTCCAGGTGAT +
Preference number: 5 (lower is better)
Translates to: IIQNNLQPSKQLMHLLRDSQLAC*DLFPGD
Trigger: ATCACCTGGAAACAGATCCAAACAAGCTAATTGAGA...ATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGTATGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp CACCACTATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCATCTCAATTAGCTTGTTaGGATCTGTTTCCAGGTGAT +
Preference number: 5 (lower is better)
Translates to: HHYSNPQCNSYLLSIRCSSQLAC*DLFPGD
Trigger: ATCACCTGGAAACAGATCCAAACAAGCTAATTGAGA...TGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATAGTGGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp AACACTTTTTCCTCATCTTGTTTACTTTGTCTAACTCCCATTCATCACAAAGTGAATCCTTCCAGAAGATaGACGGAAGACAATGGAGGG +
Preference number: 5 (lower is better)
Translates to: NTFSSSCLLCLTPIHHKVNPSRR*TEDNGG
Trigger: CCCTCCATTGTCTTCCGTCAATCTTCTGGAAGGATT...CACTTTGTGATGAATGGGAGTTAGACAAAGTAAACAAGATGAGGAAAAAGTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394084.5
CDS-3UTR CAA 90 bp ATCATACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATAGGTCTTCAATCTTATaGGGAATATCCTCAGAGGTT +
Preference number: 5 (lower is better)
Translates to: IIQNNLQPSKQLMHLLRDRSSIL*GISSEV
Trigger: AACCTCTGAGGATATTCCCAATAAGATTGAAGACCT...ATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGTATGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp GTAGTACTAGTCTCTACTTGGGGACAAGAAAATAGAATATGCAACTCAGAAAGGCAAATTGATTCTCTGTaGCTTCGCAATCCATGCTGT +
Preference number: 5 (lower is better)
Translates to: VVLVSTWGQENRICNSERQIDSL*LRNPCC
Trigger: ACAGCATGGATTGCGAAGCAACAGAGAATCAATTTG...CCTTTCTGAGTTGCATATTCTATTTTCTTGTCCCCAAGTAGAGACTAGTACTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp GTAGTACTAGTCTCTACTTGGGGACAAGAAAATAGAATATGCAACTCAGAAAGGATAAGCCGATCCAAATaGATTCTCTGTTGCTTCGCA +
Preference number: 5 (lower is better)
Translates to: VVLVSTWGQENRICNSERISRSK*ILCCFA
Trigger: TGCGAAGCAACAGAGAATCAATTTGGATCGGCTTAT...CCTTTCTGAGTTGCATATTCTATTTTCTTGTCCCCAAGTAGAGACTAGTACTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp ACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTGTATCTTCCAAAATTTaGGCATGTTGGCAACATTCA +
Preference number: 5 (lower is better)
Translates to: TKQSSAFKAADAPSQRSVVSSKI*ACWQHS
Trigger: TGAATGTTGCCAACATGCCAAAATTTTGGAAGATAC...AACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp ATCATACAAAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTCCTGAAATCCCAATaGCTTATACCCATCAACAAA +
Preference number: 5 (lower is better)
Translates to: IIQNNLQPSKQLMHLLRDLLKSQ*LIPINK
Trigger: TTTGTTGATGGGTATAAGCAATTGGGATTTCAGGAG...ATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTTTGTATGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp CACCACTATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCACTGATCTTCTTTTCTTaGCTCTCAAGCAGTAATCTC +
Preference number: 5 (lower is better)
Translates to: HHYSNPQCNSYLLSIRCSLIFFS*LSSSNL
Trigger: GAGATTACTGCTTGAGAGCAAAGAAAAGAAGATCAG...TGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATAGTGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp AAACAATCTTCAGCCTTCAAAGCAGCTGATGCACCTTCTCAGAGATCTGTTTGTGAGTTTCTGAAAGTCTaGAATGAATTCCCTGATCTT +
Preference number: 5 (lower is better)
Translates to: KQSSAFKAADAPSQRSVCEFLKV*NEFPDL
Trigger: AAGATCAGGGAATTCATTCAAGACTTTCAGAAACTC...ACAAACAGATCTCTGAGAAGGTGCATCAGCTGCTTTGAAGGCTGAAGATTGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp GCCCAAAGACGAGAGAACCTGCTTGTTAGCTCATTAACCTGTTTAGTAAAGATCGAGTTTCTGAAAGTCTaGAATGAATTCCCTGATCTT +
Preference number: 5 (lower is better)
Translates to: AQRRENLLVSSLTCLVKIEFLKV*NEFPDL
Trigger: AAGATCAGGGAATTCATTCAAGACTTTCAGAAACTC...GATCTTTACTAAACAGGTTAATGAGCTAACAAGCAGGTTCTCTCGTCTTTGGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp TATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCATTAATGAAGTATGTCCCCATCTaGATTAGGGTAGAAGGCGAG +
Preference number: 5 (lower is better)
Translates to: YSNPQCNSYLLSIRCSLMKYVPI*IRVEGE
Trigger: CTCGCCTTCTACCCTAATCAAGATGGGGACATACTT...CATTAATGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp TATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCATTAATGGCCCATGTACAAGACTaGTGCTTGAAGCTTTGGTGT +
Preference number: 5 (lower is better)
Translates to: YSNPQCNSYLLSIRCSLMAHVQD*CLKLWC
Trigger: ACACCAAAGCTTCAAGCACAAGTCTTGTACATGGGC...CATTAATGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS GCA 90 bp TATGATAAGCCGATCCAAATTGATTCTCTGTTGCTTCGCAATCCATaGTGTACGATACAACTTTTCAGCTGTCTTAAGTACATCTGCATT +
Preference number: 5 (lower is better)
Translates to: YDKPIQIDSLLLRNP*CTIQLFSCLKYICI
Trigger: AATGCAGATGTACTTAAGACAGCTGAAAAGTTGTATCGTACAGCATGGATTGCGAAGCAACAGAGAATCAATTTGGATCGGCTTATCATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000297933.11
ENST00000312123.13
ENST00000394083.6
ENST00000394084.5
ENST00000394104.6
ENST00000394105.6
ENST00000461379.5
ENST00000467750.5
ENST00000470056.5
ENST00000495955.5
ENST00000497580.5
CDS-3UTR CAA 90 bp ACAATAAGACAAAGACTTGAAGAGTATGATGCCACACTCCTGTTGATACAATTCTCTTGCATGATGCAATaGCCATACAGGGAGGTAAAA +
Preference number: 5 (lower is better)
Translates to: TIRQRLEEYDATLLLIQFSCMMQ*PYREVK
Trigger: TTTTACCTCCCTGTATGGCAATTGCATCATGCAAGA...GAATTGTATCAACAGGAGTGTGGCATCATACTCTTCAAGTCTTTGTCTTATTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394084.5
CDS-3UTR CAA 90 bp GTAGTACTAGTCTCTACTTGGGGACAAGAAAATAGAATATGCAACTCAGAAAGGTCTCAATTAGCTTGTTaGGATCTGTTTCCAGGTGAT +
Preference number: 5 (lower is better)
Translates to: VVLVSTWGQENRICNSERSQLAC*DLFPGD
Trigger: ATCACCTGGAAACAGATCCAAACAAGCTAATTGAGA...CCTTTCTGAGTTGCATATTCTATTTTCTTGTCCCCAAGTAGAGACTAGTACTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp TGCTTAACATTTACTGAATCAAAGGCTGAAGTAAATGGACTCTCATCTAGGTCTATCGATTCTTTTTATTaGCTGGAGTGGTTGCTGGAG +
Preference number: 5 (lower is better)
Translates to: CLTFTESKAEVNGLSSRSIDSFY*LEWLLE
Trigger: CTCCAGCAACCACTCCAGCAAATAAAAAGAATCGAT...AGACCTAGATGAGAGTCCATTTACTTCAGCCTTTGATTCAGTAAATGTTAAGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR CAA 90 bp TATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCATTAATGAGGGTAAGAATGCCTTaGCTTGAATGCCTCCATTTC +
Preference number: 5 (lower is better)
Translates to: YSNPQCNSYLLSIRCSLMRVRMP*LECLHF
Trigger: GAAATGGAGGCATTCAAGCAAAGGCATTCTTACCCT...CATTAATGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp TATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCATTAATGTCATCATCGCTATCTTaGCGTTCTTCAGTCTCTCCT +
Preference number: 5 (lower is better)
Translates to: YSNPQCNSYLLSIRCSLMSSSLS*RSSVSP
Trigger: AGGAGAGACTGAAGAACGCAAAGATAGCGATGATGA...CATTAATGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp ACAATAAGACAAAGACTTGAAGAGTATGATGCCACACTCCTGTTGATACAATTCCAAATTGATTCTCTGTaGCTTCGCAATCCATGCTGT +
Preference number: 5 (lower is better)
Translates to: TIRQRLEEYDATLLLIQFQIDSL*LRNPCC
Trigger: ACAGCATGGATTGCGAAGCAACAGAGAATCAATTTG...GAATTGTATCAACAGGAGTGTGGCATCATACTCTTCAAGTCTTTGTCTTATTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394084.5
CDS-3UTR CAA 90 bp GTAGTACTAGTCTCTACTTGGGGACAAGAAAATAGAATATGCAACTCAGAAAGGCTCCTGAAATCCCAATaGCTTATACCCATCAACAAA +
Preference number: 5 (lower is better)
Translates to: VVLVSTWGQENRICNSERLLKSQ*LIPINK
Trigger: TTTGTTGATGGGTATAAGCAATTGGGATTTCAGGAG...CCTTTCTGAGTTGCATATTCTATTTTCTTGTCCCCAAGTAGAGACTAGTACTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp TATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCATTAATGCTGTACTTTCATAGTTaGCCATTGCTCCATCACTGG +
Preference number: 5 (lower is better)
Translates to: YSNPQCNSYLLSIRCSLMLYFHS*PLLHHW
Trigger: CCAGTGATGGAGCAATGGCAAACTATGAAAGTACAG...CATTAATGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS GCA 90 bp CTGGAATCTAAAATAGTAGTCAACTGGGTTGTTAAAGCAAGGGATTaGTATAGATCTACAGGACAAAGTTCCATAGTGAAACACAAACTC +
Preference number: 5 (lower is better)
Translates to: LESKIVVNWVVKARD*YRSTGQSSIVKHKL
Trigger: GAGTTTGTGTTTCACTATGGAACTTTGTCCTGTAGATCTATAGCAATCCCTTGCTTTAACAACCCAGTTGACTACTATTTTAGATTCCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474637.5
CDS-3UTR CAA 90 bp ACAATAAGACAAAGACTTGAAGAGTATGATGCCACACTCCTGTTGATACAATTCGTAGCTTTCATCTTCTaGCATGATGCAATTGCCATA +
Preference number: 5 (lower is better)
Translates to: TIRQRLEEYDATLLLIQFVAFIF*HDAIAI
Trigger: TATGGCAATTGCATCATGCAAGAAGATGAAAGCTAC...GAATTGTATCAACAGGAGTGTGGCATCATACTCTTCAAGTCTTTGTCTTATTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394084.5
CDS-3UTR CAA 90 bp AACACTTTTTCCTCATCTTGTTTACTTTGTCTAACTCCCATTCATCACAAAGTGATCGATTCTTTTTATTaGCTGGAGTGGTTGCTGGAG +
Preference number: 5 (lower is better)
Translates to: NTFSSSCLLCLTPIHHKVIDSFY*LEWLLE
Trigger: CTCCAGCAACCACTCCAGCAAATAAAAAGAATCGAT...CACTTTGTGATGAATGGGAGTTAGACAAAGTAAACAAGATGAGGAAAAAGTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000394084.5
CDS-3UTR CAA 90 bp TATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCATTAATGCTGAATTGGAGCGATTaGAAGGACCTTCAGATATTC +
Preference number: 5 (lower is better)
Translates to: YSNPQCNSYLLSIRCSLMLNWSD*KDLQIF
Trigger: GAATATCTGAAGGTCCTTCAAATCGCTCCAATTCAG...CATTAATGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp AGTAATCGCAAATACCTCATCACTGTTAATCCACTTACTAAAAATCCTTTGGGCAGGTCTTCAATCTTATaGGGAATATCCTCAGAGGTT +
Preference number: 5 (lower is better)
Translates to: SNRKYLITVNPLTKNPLGRSSIL*GISSEV
Trigger: AACCTCTGAGGATATTCCCAATAAGATTGAAGACCT...GCCCAAAGGATTTTTAGTAAGTGGATTAACAGTGATGAGGTATTTGCGATTACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR CAA 90 bp TATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCATTAATGCAAATTGATTCTCTGTaGCTTCGCAATCCATGCTGT +
Preference number: 5 (lower is better)
Translates to: YSNPQCNSYLLSIRCSLMQIDSL*LRNPCC
Trigger: ACAGCATGGATTGCGAAGCAACAGAGAATCAATTTG...CATTAATGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp ACAGGCATGACTTCCATTTATGAAACCACTATCACTTCCTGCAAAGAACAAGAAGTATCTTCCAAAATTTaGGCATGTTGGCAACATTCA +
Preference number: 5 (lower is better)
Translates to: TGMTSIYETTITSCKEQEVSSKI*ACWQHS
Trigger: TGAATGTTGCCAACATGCCAAAATTTTGGAAGATAC...TTCTTGTTCTTTGCAGGAAGTGATAGTGGTTTCATAAATGGAAGTCATGCCTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497580.5
CDS-3UTR CAA 90 bp AGTAATCGCAAATACCTCATCACTGTTAATCCACTTACTAAAAATCCTTTGGGCCTGATCTTCTTTTCTTaGCTCTCAAGCAGTAATCTC +
Preference number: 5 (lower is better)
Translates to: SNRKYLITVNPLTKNPLGLIFFS*LSSSNL
Trigger: GAGATTACTGCTTGAGAGCAAAGAAAAGAAGATCAG...GCCCAAAGGATTTTTAGTAAGTGGATTAACAGTGATGAGGTATTTGCGATTACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297933.11
ENST00000470056.5
CDS-3UTR CAA 90 bp TATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCATTAATGGTAGCTTTCATCTTCTaGCATGATGCAATTGCCATA +
Preference number: 5 (lower is better)
Translates to: YSNPQCNSYLLSIRCSLMVAFIF*HDAIAI
Trigger: TATGGCAATTGCATCATGCAAGAAGATGAAAGCTAC...CATTAATGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000495955.5
CDS-3UTR CAA 90 bp TGCTTAACATTTACTGAATCAAAGGCTGAAGTAAATGGACTCTCATCTAGGTCTGAGTTTCTGAAAGTCTaGAATGAATTCCCTGATCTT +
Preference number: 5 (lower is better)
Translates to: CLTFTESKAEVNGLSSRSEFLKV*NEFPDL
Trigger: AAGATCAGGGAATTCATTCAAGACTTTCAGAAACTC...AGACCTAGATGAGAGTCCATTTACTTCAGCCTTTGATTCAGTAAATGTTAAGCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS-3UTR CAA 90 bp TATTCTAATCCTCAGTGCAACTCATACCTTCTTTCCATTAGATGCTCATTAATGACATTCACTGAATTCTaGGTCTGTGCATTCAATGTG +
Preference number: 5 (lower is better)
Translates to: YSNPQCNSYLLSIRCSLMTFTEF*VCAFNV
Trigger: CACATTGAATGCACAGACCAAGAATTCAGTGAATGT...CATTAATGAGCATCTAATGGAAAGAAGGTATGAGTTGCACTGAGGATTAGAATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000394104.6
ENST00000470056.5
CDS GCA 72 bp GCCGTCGCCCTAGCCGGTGACTGCCCCCGCCGCCGCTaGCGCCACCTTCGCCACTCGCCTGTTGGCTTCCCT +
Preference number: 6 (lower is better)
Translates to: AVALAGDCPRRR*RHLRHSPVGFP
Trigger: AGGGAAGCCAACAGGCGAGTGGCGAAGGTGGCGGCAGCGGCGGCGGGGGCAGTCACCGGCTAGGGCGACGGC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297933.11
ENST00000461379.5
ENST00000497580.5
CDS CCA 72 bp AGAGGTTGCACTTATGCCGGACACAACACTGAGGCCTaGTGTGCTGGGGCGGGAACTGACCTCCCTGACATC +
Preference number: 6 (lower is better)
Translates to: RGCTYAGHNTEA*CAGAGTDLPDI
Trigger: GATGTCAGGGAGGTCAGTTCCCGCCCCAGCACACCAGGCCTCAGTGTTGTGTCCGGCATAAGTGCAACCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000265956.8
ENST00000297933.11
ENST00000312123.13
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000431329.5
ENST00000436712.2
ENST00000467750.5
ENST00000470056.5
ENST00000495955.5
CDS TCA 72 bp GTCAGCTGGTGGGCACCTAAAACAGGAGGGAAACTGTaGGACCAAGCCAGGACGCAGGACAGACGGTCTCAA +
Preference number: 6 (lower is better)
Translates to: VSWWAPKTGGKL*DQARTQDRRSQ
Trigger: TTGAGACCGTCTGTCCTGCGTCCTGGCTTGGTCTCACAGTTTCCCTCCTGTTTTAGGTGCCCACCAGCTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479511.1
CDS GCA 72 bp AGATGTGCTACCCAGTCCAGAACGCTCTCCAGTTCTTaGAGACGCTCCTCCTGCTTTAGGTCTGGGGCCTCT +
Preference number: 6 (lower is better)
Translates to: RCATQSRTLSSS*RRSSCFRSGAS
Trigger: AGAGGCCCCAGACCTAAAGCAGGAGGAGCGTCTGCAAGAACTGGAGAGCGTTCTGGACTGGGTAGCACATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265956.8
CDS GCA 72 bp GATGTGCTACCCAGTCCAGAACAGCTCTCCAGTTCTTaGAGACGCTCCTCCTGCTTTAGGTCTGGGGCCTCT +
Preference number: 6 (lower is better)
Translates to: DVLPSPEQLSSS*RRSSCFRSGAS
Trigger: AGAGGCCCCAGACCTAAAGCAGGAGGAGCGTCTGCAAGAACTGGAGAGCTGTTCTGGACTGGGTAGCACATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000297933.11
ENST00000312123.13
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000431329.5
ENST00000436712.2
ENST00000467750.5
ENST00000470056.5
ENST00000495955.5
ENST00000497580.5
CDS TCA 72 bp CATTCTCTCCTCCTCATCAAGCGCTTGAGTATGGCGTaGAAGCAGCTCTCCCCAGAGTTCCTGAGTGCCACC +
Preference number: 6 (lower is better)
Translates to: HSLLLIKRLSMA*KQLSPEFLSAT
Trigger: GGTGGCACTCAGGAACTCTGGGGAGAGCTGCTTTCACGCCATACTCAAGCGCTTGATGAGGAGGAGAGAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469498.1
CDS GCA 72 bp CAGAAGATTGACGGAAGACAATGGAGGGGTCTCCACTaGACGGCCCCCAATCACAACATCAAGGAAAGCGGC +
Preference number: 6 (lower is better)
Translates to: QKIDGRQWRGLH*TAPNHNIKESG
Trigger: GCCGCTTTCCTTGATGTTGTGATTGGGGGCCGTGCAGTGGAGACCCCTCCATTGTCTTCCGTCAATCTTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000265956.8
ENST00000297933.11
ENST00000312123.13
ENST00000394083.6
ENST00000394084.5
ENST00000394104.6
ENST00000394105.6
ENST00000431329.5
ENST00000436712.2
ENST00000467750.5
ENST00000470056.5
ENST00000495955.5
ENST00000497580.5
CDS GCA 72 bp TCCAGAACGCTCTCCAGTTCTTGCAGACGCTCCTCCTaGTTTAGGTCTGGGGCCTCTGAGTCACTTGGCAAT +
Preference number: 6 (lower is better)
Translates to: SRTLSSSCRRSS*FRSGASESLGN
Trigger: ATTGCCAAGTGACTCAGAGGCCCCAGACCTAAAGCAGGAGGAGCGTCTGCAAGAACTGGAGAGCGTTCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265956.8
CDS GCA 72 bp CCAGAACAGCTCTCCAGTTCTTGCAGACGCTCCTCCTaGTTTAGGTCTGGGGCCTCTGAGTCACTTGGCAAT +
Preference number: 6 (lower is better)
Translates to: PEQLSSSCRRSS*FRSGASESLGN
Trigger: ATTGCCAAGTGACTCAGAGGCCCCAGACCTAAAGCAGGAGGAGCGTCTGCAAGAACTGGAGAGCTGTTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000297933.11
ENST00000312123.13
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000431329.5
ENST00000436712.2
ENST00000467750.5
ENST00000470056.5
ENST00000495955.5
ENST00000497580.5
CDS CCA 72 bp TCTGCTCAATCCTTCCAGAAGATTGACGGAAGACAATaGAGGGGTCTCCACTGCACGGCCCCCAATCACAAC +
Preference number: 6 (lower is better)
Translates to: SAQSFQKIDGRQ*RGLHCTAPNHN
Trigger: GTTGTGATTGGGGGCCGTGCAGTGGAGACCCCTCCATTGTCTTCCGTCAATCTTCTGGAAGGATTGAGCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000265956.8
ENST00000297933.11
ENST00000312123.13
ENST00000394083.6
ENST00000394084.5
ENST00000394104.6
ENST00000394105.6
ENST00000431329.5
ENST00000436712.2
ENST00000467750.5
ENST00000470056.5
ENST00000495955.5
ENST00000497580.5
CDS TCA 72 bp ACTCCTAGCTTCATTCTCTCCTCCTCATCAAGCGCTTaGGTATGGCGTGAAAGCAGCTCTCCCCAGAGTTCC +
Preference number: 6 (lower is better)
Translates to: TPSFILSSSSSA*VWRESSSPQSS
Trigger: GGAACTCTGGGGAGAGCTGCTTTCACGCCATACTCAAGCGCTTGATGAGGAGGAGAGAATGAAGCTAGGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469498.1
CDS GCA 72 bp TTCAATGTGGGAAAGGCTCAAAGGCTGATCACTGAATaGCAGCTACTTGGGAGGGTCAGATGGGAGGATCGC +
Preference number: 6 (lower is better)
Translates to: FNVGKAQRLITE*QLLGRVRWEDR
Trigger: GCGATCCTCCCATCTGACCCTCCCAAGTAGCTGGCATTCAGTGATCAGCCTTTGAGCCTTTCCCACATTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297933.11
ENST00000394084.5
ENST00000467750.5
ENST00000495955.5
CDS GCA 72 bp AGAGTCTGGGAGATCATCAGCCGAGATGTTCTGCAGTaGTTCGTCACGGGGAGAATCATGTGCACTTTCACC +
Preference number: 6 (lower is better)
Translates to: RVWEIISRDVLQ*FVTGRIMCTFT
Trigger: GGTGAAAGTGCACATGATTCTCCCCGTGACGAAGCACTGCAGAACATCTCGGCTGATGATCTCCCAGACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000297933.11
ENST00000312123.13
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000474637.5
ENST00000495955.5
CDS GCA 72 bp CTTGCAGAGTCTGGGAGATCATCAGCCGAGATGTTCTaGAGTGCTTCGTCACGGGGAGAATCATGTGCACTT +
Preference number: 6 (lower is better)
Translates to: LAESGRSSAEMF*SASSRGESCAL
Trigger: AAGTGCACATGATTCTCCCCGTGACGAAGCACTGCAGAACATCTCGGCTGATGATCTCCCAGACTCTGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000297933.11
ENST00000312123.13
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000474637.5
ENST00000495955.5
CDS CCA 72 bp TGGTGGTGGATGCGATGGCCTAGCATAGTGAACCTTTaGCCTTACCACAGCAGAAGCCCCGTGAGTTATTTC +
Preference number: 6 (lower is better)
Translates to: WWWMRWPSIVNL*PYHSRSPVSYF
Trigger: GAAATAACTCACGGGGCTTCTGCTGTGGTAAGGCCAAAGGTTCACTATGCTAGGCCATCGCATCCACCACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431329.5
CDS CAA 72 bp CTTCTGGGTCTGTGTGGTCTGGTAAACCATTCCTTGTaGAATGGGTCAGCACTGGGAAGGCAACAGAGTCCG +
Preference number: 6 (lower is better)
Translates to: LLGLCGLVNHSL*NGSALGRQQSP
Trigger: CGGACTCTGTTGCCTTCCCAGTGCTGACCCATTCAACAAGGAATGGTTTACCAGACCACACAGACCCAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000297933.11
ENST00000312123.13
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000474637.5
ENST00000495955.5
CDS CAA 90 bp ACCAACACAGGAACAAAGTCATCCGCTCCAGGGACAGAGTCCTCATaGGCCAGGCTCAGGAGGTTCATAATCGTAGAGCACATTCTCAGG +
Preference number: 6 (lower is better)
Translates to: TNTGTKSSAPGTESS*ARLRRFIIVEHILR
Trigger: CCTGAGAATGTGCTCTACGATTATGAACCTCCTGAGCCTGGCCAATGAGGACTCTGTCCCTGGAGCGGATGACTTTGTTCCTGTGTTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000297933.11
ENST00000312123.13
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000474637.5
ENST00000495955.5
CDS CAA 90 bp GAAAATCCGGTTCATCACGCTTCGCTCAATGGCCAGCTGTGCATCTaGAAGCTGTTCTTCACTCGCGTTTTGCCATATGACATCCTGGGC +
Preference number: 6 (lower is better)
Translates to: ENPVHHASLNGQLCI*KLFFTRVLPYDILG
Trigger: GCCCAGGATGTCATATGGCAAAACGCGAGTGAAGAACAGCTTCAAGATGCACAGCTGGCCATTGAGCGAAGCGTGATGAACCGGATTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000297933.11
ENST00000312123.13
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000467707.1
ENST00000470056.5
ENST00000474637.5
ENST00000495955.5
CDS CAA 90 bp GCACCATGCAGCTGCCTACTCATCCCATTTCTAGGTCTGAGAGCCTaGCCAAAGCAGGAAATTGGGAAGAGTAGCTCCACCTTCTCATCA +
Preference number: 6 (lower is better)
Translates to: APCSCLLIPFLGLRA*PKQEIGKSSSTFSS
Trigger: TGATGAGAAGGTGGAGCTACTCTTCCCAATTTCCTGCTTTGGCAAGGCTCTCAGACCTAGAAATGGGATGAGTAGGCAGCTGCATGGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474637.5
CDS TCA 72 bp CATCTTCAATGTGGGAAAGGCTCAAAGGCTGATCACTaGATGCCAGCTACTTGGGAGGGTCAGATGGGAGGA +
Preference number: 6 (lower is better)
Translates to: HLQCGKGSKADH*MPATWEGQMGG
Trigger: TCCTCCCATCTGACCCTCCCAAGTAGCTGGCATTCAGTGATCAGCCTTTGAGCCTTTCCCACATTGAAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297933.11
ENST00000394084.5
ENST00000467750.5
ENST00000495955.5
CDS GCA 72 bp CGGGGATCTCCCTCTTCAGAGCCAGTCATTGCTAACTaGTGCAAAAGGCGGCCTACCTGCATCAGATTAAAT +
Preference number: 6 (lower is better)
Translates to: RGSPSSEPVIAN*CKRRPTCIRLN
Trigger: ATTTAATCTGATGCAGGTAGGCCGCCTTTTGCAGCAGTTAGCAATGACTGGCTCTGAAGAGGGAGATCCCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000265956.8
ENST00000297933.11
ENST00000312123.13
ENST00000394083.6
ENST00000394084.5
ENST00000394104.6
ENST00000394105.6
ENST00000431329.5
ENST00000436712.2
ENST00000467750.5
ENST00000470056.5
ENST00000495955.5
ENST00000497580.5
CDS GCA 72 bp AAGCGGCAACACAGCTTTTGTCAAACTTTCCAAGGCTaGTCTTTGTTCGGGGATCTCCCTCTTCAGAGCCAG +
Preference number: 6 (lower is better)
Translates to: KRQHSFCQTFQG*SLFGDLPLQSQ
Trigger: CTGGCTCTGAAGAGGGAGATCCCCGAACAAAGAGCAGCCTTGGAAAGTTTGACAAAAGCTGTGTTGCCGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000265956.8
ENST00000297933.11
ENST00000312123.13
ENST00000394083.6
ENST00000394084.5
ENST00000394104.6
ENST00000394105.6
ENST00000431329.5
ENST00000436712.2
ENST00000467750.5
ENST00000470056.5
ENST00000495955.5
ENST00000497580.5
CDS GCA 72 bp AATCCGGTTCATCACGCTTCGCTCAATGGCCAGCTGTaGATCTTGAAGCTGTTCTTCACTCGCGTTTTGCCA +
Preference number: 6 (lower is better)
Translates to: NPVHHASLNGQL*ILKLFFTRVLP
Trigger: TGGCAAAACGCGAGTGAAGAACAGCTTCAAGATGCACAGCTGGCCATTGAGCGAAGCGTGATGAACCGGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000297933.11
ENST00000312123.13
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000467707.1
ENST00000470056.5
ENST00000474637.5
ENST00000495955.5
CDS CAA 72 bp AGCTGCCTACTCATCCCATTTCTAGGTCTGAGAGCCTaGCCAAAGCAGGAAATTGGGAAGAGTAGCTCCACC +
Preference number: 6 (lower is better)
Translates to: SCLLIPFLGLRA*PKQEIGKSSST
Trigger: GGTGGAGCTACTCTTCCCAATTTCCTGCTTTGGCAAGGCTCTCAGACCTAGAAATGGGATGAGTAGGCAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474637.5
CDS CAA 90 bp GGAAAGCGGCAACACAGCTTTTGTCAAACTTTCCAAGGCTGCTCTTaGTTCGGGGATCTCCCTCTTCAGAGCCAGTCATTGCTAACTGCT +
Preference number: 6 (lower is better)
Translates to: GKRQHSFCQTFQGCS*FGDLPLQSQSLLTA
Trigger: AGCAGTTAGCAATGACTGGCTCTGAAGAGGGAGATCCCCGAACAAAGAGCAGCCTTGGAAAGTTTGACAAAAGCTGTGTTGCCGCTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000265956.8
ENST00000297933.11
ENST00000312123.13
ENST00000394083.6
ENST00000394084.5
ENST00000394104.6
ENST00000394105.6
ENST00000431329.5
ENST00000436712.2
ENST00000467750.5
ENST00000470056.5
ENST00000495955.5
ENST00000497580.5
CDS CAA 90 bp CAATTTCATTGTCTTCTGGGTCTGTGTGGTCTGGTAAACCATTCCTaGTTGAATGGGTCAGCACTGGGAAGGCAACAGAGTCCGCAGAGC +
Preference number: 6 (lower is better)
Translates to: QFHCLLGLCGLVNHS*LNGSALGRQQSPQS
Trigger: GCTCTGCGGACTCTGTTGCCTTCCCAGTGCTGACCCATTCAACAAGGAATGGTTTACCAGACCACACAGACCCAGAAGACAATGAAATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000297933.11
ENST00000312123.13
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000474637.5
ENST00000495955.5
CDS GCA 72 bp ACAAATGAAGCAGGCCAACAGGAGATCAGTACACATTaGCCTGACCTCCCCAACTTCCAGCCTATCTACACA +
Preference number: 6 (lower is better)
Translates to: TNEAGQQEISTH*PDLPNFQPIYT
Trigger: TGTGTAGATAGGCTGGAAGTTGGGGAGGTCAGGGCAATGTGTACTGATCTCCTGTTGGCCTGCTTCATTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000265956.8
ENST00000297933.11
ENST00000312123.13
ENST00000394083.6
ENST00000394084.5
ENST00000394104.6
ENST00000394105.6
ENST00000431329.5
ENST00000436712.2
ENST00000467750.5
ENST00000470056.5
ENST00000495955.5
ENST00000497580.5
CDS CCA 72 bp GAGTTCCTGAGTGCCACCGTGCTGAGAAGAGGCCTTTaGAATAAGTTTCTAGCTTTACTCCTGGATGCTCTC +
Preference number: 6 (lower is better)
Translates to: EFLSATVLRRGL*NKFLALLLDAL
Trigger: GAGAGCATCCAGGAGTAAAGCTAGAAACTTATTCCAAAGGCCTCTTCTCAGCACGGTGGCACTCAGGAACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469498.1
CDS CAA 72 bp TGTCTTCTGGGTCTGTGTGGTCTGGTAAACCATTCCTaGTTGAATGGGTCAGCACTGGGAAGGCAACAGAGT +
Preference number: 6 (lower is better)
Translates to: CLLGLCGLVNHS*LNGSALGRQQS
Trigger: ACTCTGTTGCCTTCCCAGTGCTGACCCATTCAACAAGGAATGGTTTACCAGACCACACAGACCCAGAAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000297933.11
ENST00000312123.13
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000474637.5
ENST00000495955.5
CDS CAA 72 bp GTTCATCACGCTTCGCTCAATGGCCAGCTGTGCATCTaGAAGCTGTTCTTCACTCGCGTTTTGCCATATGAC +
Preference number: 6 (lower is better)
Translates to: VHHASLNGQLCI*KLFFTRVLPYD
Trigger: GTCATATGGCAAAACGCGAGTGAAGAACAGCTTCAAGATGCACAGCTGGCCATTGAGCGAAGCGTGATGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000297933.11
ENST00000312123.13
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000467707.1
ENST00000470056.5
ENST00000474637.5
ENST00000495955.5
CDS CAA 72 bp GATCCTTCATGGTCCATATGTAGGTCCATTAGCATATaGGTGCGGCTTCTGCTCCGAGTTGCAAACGGGGTT +
Preference number: 6 (lower is better)
Translates to: DPSWSICRSISI*VRLLLRVANGV
Trigger: AACCCCGTTTGCAACTCGGAGCAGAAGCCGCACCAATATGCTAATGGACCTACATATGGACCATGAAGGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436712.2
CDS CAA 90 bp TTTCATTGTCTTCTGGGTCTGTGTGGTCTGGTAAACCATTCCTTGTaGAATGGGTCAGCACTGGGAAGGCAACAGAGTCCGCAGAGCAAA +
Preference number: 6 (lower is better)
Translates to: FHCLLGLCGLVNHSL*NGSALGRQQSPQSK
Trigger: TTTGCTCTGCGGACTCTGTTGCCTTCCCAGTGCTGACCCATTCAACAAGGAATGGTTTACCAGACCACACAGACCCAGAAGACAATGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000297933.11
ENST00000312123.13
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000474637.5
ENST00000495955.5
CDS TCA 72 bp GTTTCACCATCTTCAATGTGGGAAAGGCTCAAAGGCTaGTCACTGAATGCCAGCTACTTGGGAGGGTCAGAT +
Preference number: 6 (lower is better)
Translates to: VSPSSMWERLKG*SLNASYLGGSD
Trigger: ATCTGACCCTCCCAAGTAGCTGGCATTCAGTGATCAGCCTTTGAGCCTTTCCCACATTGAAGATGGTGAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297933.11
ENST00000394084.5
ENST00000467750.5
ENST00000495955.5
CDS TCA 72 bp GGGAAGAGTAGCTCCACCTTCTCATCATCACCAGAATaGCAGTGTCAAAGTTCAGGGCAGACTGAATGGATG +
Preference number: 6 (lower is better)
Translates to: GKSSSTFSSSPE*QCQSSGQTEWM
Trigger: CATCCATTCAGTCTGCCCTGAACTTTGACACTGTCATTCTGGTGATGATGAGAAGGTGGAGCTACTCTTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474637.5
CDS GCA 72 bp GATGTTCTGCAGTGCTTCGTCACGGGGAGAATCATGTaGACTTTCACCATCACCCATAACCTCTGTACTTTC +
Preference number: 6 (lower is better)
Translates to: DVLQCFVTGRIM*TFTITHNLCTF
Trigger: GAAAGTACAGAGGTTATGGGTGATGGTGAAAGTGCACATGATTCTCCCCGTGACGAAGCACTGCAGAACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000312123.13
ENST00000394083.6
ENST00000394105.6
ENST00000470056.5
ENST00000474637.5
CDS GCA 72 bp CTTCATGGTCCATATGTAGGTCCATTAGCATATTGGTaGGGCTTCTGCTCCGAGTTGCAAACGGGGTTACTA +
Preference number: 6 (lower is better)
Translates to: LHGPYVGPLAYW*GFCSELQTGLL
Trigger: TAGTAACCCCGTTTGCAACTCGGAGCAGAAGCCGCACCAATATGCTAATGGACCTACATATGGACCATGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436712.2
CDS CCA 72 bp AGGACCTCATTTTCTGACATCATCCCTGGAGTAAGCTaGGGACCTGTACCTAAGGAAATGACCAACACCTCT +
Preference number: 6 (lower is better)
Translates to: RTSFSDIIPGVS*GPVPKEMTNTS
Trigger: AGAGGTGTTGGTCATTTCCTTAGGTACAGGTCCCCAGCTTACTCCAGGGATGATGTCAGAAAATGAGGTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000265956.8
ENST00000297933.11
ENST00000312123.13
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000431329.5
ENST00000436712.2
ENST00000467750.5
ENST00000470056.5
ENST00000495955.5
ENST00000497580.5
CDS CCA 72 bp ATCCTTCATGGTCCATATGTAGGTCCATTAGCATATTaGTGCGGCTTCTGCTCCGAGTTGCAAACGGGGTTA +
Preference number: 6 (lower is better)
Translates to: ILHGPYVGPLAY*CGFCSELQTGL
Trigger: TAACCCCGTTTGCAACTCGGAGCAGAAGCCGCACCAATATGCTAATGGACCTACATATGGACCATGAAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436712.2
CDS CAA 72 bp CAACACAGCTTTTGTCAAACTTTCCAAGGCTGCTCTTaGTTCGGGGATCTCCCTCTTCAGAGCCAGTCATTG +
Preference number: 6 (lower is better)
Translates to: QHSFCQTFQGCS*FGDLPLQSQSL
Trigger: CAATGACTGGCTCTGAAGAGGGAGATCCCCGAACAAAGAGCAGCCTTGGAAAGTTTGACAAAAGCTGTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000265956.8
ENST00000297933.11
ENST00000312123.13
ENST00000394083.6
ENST00000394084.5
ENST00000394104.6
ENST00000394105.6
ENST00000431329.5
ENST00000436712.2
ENST00000467750.5
ENST00000470056.5
ENST00000495955.5
ENST00000497580.5
CDS CAA 90 bp CCCCCAAAATCAGAGCTGCACTCAGATCTCAGGTCTTCAATCTTATaGGGAATATCCTCAGAGGTTGCACTTATGCCGGACACAACACTG +
Preference number: 6 (lower is better)
Translates to: PPKSELHSDLRSSIL*GISSEVALMPDTTL
Trigger: CAGTGTTGTGTCCGGCATAAGTGCAACCTCTGAGGATATTCCCAATAAGATTGAAGACCTGAGATCTGAGTGCAGCTCTGATTTTGGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000265956.8
ENST00000297933.11
ENST00000312123.13
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000431329.5
ENST00000436712.2
ENST00000467750.5
ENST00000470056.5
ENST00000495955.5
CDS CAA 90 bp CTGGATATGTTCATGAAGAACCTGGTCGCGAAGTATGTCCCCATCTaGATTAGGGTAGAAGGCGAGCTTGAAAATCCGGTTCATCACGCT +
Preference number: 6 (lower is better)
Translates to: LDMFMKNLVAKYVPI*IRVEGELENPVHHA
Trigger: AGCGTGATGAACCGGATTTTCAAGCTCGCCTTCTACCCTAATCAAGATGGGGACATACTTCGCGACCAGGTTCTTCATGAACATATCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000297933.11
ENST00000312123.13
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000467707.1
ENST00000470056.5
ENST00000474637.5
ENST00000495955.5
CDS TCA 72 bp CAATACCTCTACACTCCAAGCTTCACTTGTTGTCTCTaGTATGGTAGAACCAGTGCAGGGGTCAAGAAGCAC +
Preference number: 6 (lower is better)
Translates to: QYLYTPSFTCCL*YGRTSAGVKKH
Trigger: GTGCTTCTTGACCCCTGCACTGGTTCTACCATATCAGAGACAACAAGTGAAGCTTGGAGTGTAGAGGTATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000265956.8
ENST00000297933.11
ENST00000312123.13
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000431329.5
ENST00000436712.2
ENST00000467750.5
ENST00000470056.5
ENST00000495955.5
ENST00000497580.5
CDS TCA 72 bp CTGCTCCGAGTTGCAAACGGGGTTACTACTGTAATATaGGAGGTAATATTGGTAGCTGAGGAATCCCAGGCA +
Preference number: 6 (lower is better)
Translates to: LLRVANGVTTVI*EVILVAEESQA
Trigger: TGCCTGGGATTCCTCAGCTACCAATATTACCTCTCATATTACAGTAGTAACCCCGTTTGCAACTCGGAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436712.2
CDS GCA 72 bp ATAGCTGAGGTGTATTGTAGGGAGTCATTTCTAAACTaGTACTTTTTCCTGGCTTGGCCGGGGGTAGGTTTG +
Preference number: 6 (lower is better)
Translates to: IAEVYCRESFLN*YFFLAWPGVGL
Trigger: CAAACCTACCCCCGGCCAAGCCAGGAAAAAGTAGCAGTTTAGAAATGACTCCCTACAATACACCTCAGCTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENST00000265956.8
ENST00000297933.11
ENST00000312123.13
ENST00000394083.6
ENST00000394084.5
ENST00000394104.6
ENST00000394105.6
ENST00000431329.5
ENST00000436712.2
ENST00000467750.5
ENST00000470056.5
ENST00000495955.5
ENST00000497580.5
CDS GCA 72 bp CATGTTCTAACAGCTGTAGAGCTTCAACTCCATTACTaGCAGAAGGTCCTGCTCCAAGTTCTGACACAGACT +
Preference number: 6 (lower is better)
Translates to: HVLTAVELQLHY*QKVLLQVLTQT
Trigger: AGTCTGTGTCAGAACTTGGAGCAGGACCTTCTGGCAGTAATGGAGTTGAAGCTCTACAGCTGTTAGAACATG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000265956.8
ENST00000297933.11
ENST00000312123.13
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000431329.5
ENST00000436712.2
ENST00000467750.5
ENST00000470056.5
ENST00000495955.5
ENST00000497580.5
CDS GCA 72 bp GATGTTCTGCAGTGCTTCGTCACGGGGAGAATCATGTaGACTTTCACCATCACCCATAACCTCTTTATCACT +
Preference number: 6 (lower is better)
Translates to: DVLQCFVTGRIM*TFTITHNLFIT
Trigger: AGTGATAAAGAGGTTATGGGTGATGGTGAAAGTGCACATGATTCTCCCCGTGACGAAGCACTGCAGAACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394104.6
ENST00000495955.5
CDS CCA 72 bp CAGACTCTCCTTCTAGGTCTAGGGAGGACACTGAATTaGAGCGATTTGAAGGACCTTCAGATATTCCTTCCA +
Preference number: 6 (lower is better)
Translates to: QTLLLGLGRTLN*SDLKDLQIFLP
Trigger: TGGAAGGAATATCTGAAGGTCCTTCAAATCGCTCCAATTCAGTGTCCTCCCTAGACCTAGAAGGAGAGTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000265956.8
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000431329.5
ENST00000467750.5
ENST00000470056.5
ENST00000495955.5
ENST00000497580.5
CDS CCA 72 bp CAGAGCTGCACTCAGATCTCAGGTCTTCAATCTTATTaGGAATATCCTCAGAGGTTGCACTTATGCCGGACA +
Preference number: 6 (lower is better)
Translates to: QSCTQISGLQSY*EYPQRLHLCRT
Trigger: TGTCCGGCATAAGTGCAACCTCTGAGGATATTCCCAATAAGATTGAAGACCTGAGATCTGAGTGCAGCTCTG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000265956.8
ENST00000297933.11
ENST00000312123.13
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000431329.5
ENST00000436712.2
ENST00000467750.5
ENST00000470056.5
ENST00000495955.5
CDS CCA 72 bp GATGTCAGAGGCACTCCTAGAGAATCTAGACATTCTTaGGGAGTGCTGGAATTGTACCTGAGATGCATAGAG +
Preference number: 6 (lower is better)
Translates to: DVRGTPRESRHS*GVLELYLRCIE
Trigger: CTCTATGCATCTCAGGTACAATTCCAGCACTCCCCAAGAATGTCTAGATTCTCTAGGAGTGCCTCTGACATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474637.5
CDS CCA 72 bp CAGAGCTGCACTCAGATCTCAGGTCTTCAATCTTATTaGGAATATCCTCAGAGGTTGCACTTATGCCTCCCT +
Preference number: 6 (lower is better)
Translates to: QSCTQISGLQSY*EYPQRLHLCLP
Trigger: AGGGAGGCATAAGTGCAACCTCTGAGGATATTCCCAATAAGATTGAAGACCTGAGATCTGAGTGCAGCTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497580.5
CDS CAA 72 bp TCAGAGCTGCACTCAGATCTCAGGTCTTCAATCTTATaGGGAATATCCTCAGAGGTTGCACTTATGCCGGAC +
Preference number: 6 (lower is better)
Translates to: SELHSDLRSSIL*GISSEVALMPD
Trigger: GTCCGGCATAAGTGCAACCTCTGAGGATATTCCCAATAAGATTGAAGACCTGAGATCTGAGTGCAGCTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000265956.8
ENST00000297933.11
ENST00000312123.13
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000431329.5
ENST00000436712.2
ENST00000467750.5
ENST00000470056.5
ENST00000495955.5
CDS CAA 72 bp TTCATGAAGAACCTGGTCGCGAAGTATGTCCCCATCTaGATTAGGGTAGAAGGCGAGCTTGAAAATCCGGTT +
Preference number: 6 (lower is better)
Translates to: FMKNLVAKYVPI*IRVEGELENPV
Trigger: AACCGGATTTTCAAGCTCGCCTTCTACCCTAATCAAGATGGGGACATACTTCGCGACCAGGTTCTTCATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000297933.11
ENST00000312123.13
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000467707.1
ENST00000470056.5
ENST00000474637.5
ENST00000495955.5
CDS CAA 72 bp TCAGAGCTGCACTCAGATCTCAGGTCTTCAATCTTATaGGGAATATCCTCAGAGGTTGCACTTATGCCTCCC +
Preference number: 6 (lower is better)
Translates to: SELHSDLRSSIL*GISSEVALMPP
Trigger: GGGAGGCATAAGTGCAACCTCTGAGGATATTCCCAATAAGATTGAAGACCTGAGATCTGAGTGCAGCTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497580.5
CDS GCA 72 bp ATCACCCATAACCTCTGTACTTTCATAGTTTGCCATTaGTCCATCACTGGGGCTGGTCCGTTTAATGGCATT +
Preference number: 6 (lower is better)
Translates to: ITHNLCTFIVCH*SITGAGPFNGI
Trigger: AATGCCATTAAACGGACCAGCCCCAGTGATGGAGCAATGGCAAACTATGAAAGTACAGAGGTTATGGGTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297933.11
ENST00000312123.13
ENST00000394083.6
ENST00000394105.6
ENST00000470056.5
ENST00000474637.5
CDS GCA 72 bp CTTTCGGTCATCGATGGTTTTAATGAATTCTACTGCTaGTGTGAACTGCATCCACCAATAGGACTCCTCTCC +
Preference number: 6 (lower is better)
Translates to: LSVIDGFNEFYC*CELHPPIGLLS
Trigger: GGAGAGGAGTCCTATTGGTGGATGCAGTTCACAGCAGCAGTAGAATTCATTAAAACCATCGATGACCGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000297933.11
ENST00000312123.13
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000474637.5
ENST00000495955.5
CDS CCA 72 bp AGGGAGTCATTTCTAAACTGCTACTTTTTCCTGGCTTaGCCGGGGGTAGGTTTGCCAATAAATTGTCAAGAG +
Preference number: 6 (lower is better)
Translates to: RESFLNCYFFLA*PGVGLPINCQE
Trigger: CTCTTGACAATTTATTGGCAAACCTACCCCCGGCCAAGCCAGGAAAAAGTAGCAGTTTAGAAATGACTCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENST00000265956.8
ENST00000297933.11
ENST00000312123.13
ENST00000394083.6
ENST00000394084.5
ENST00000394104.6
ENST00000394105.6
ENST00000431329.5
ENST00000436712.2
ENST00000467750.5
ENST00000470056.5
ENST00000495955.5
ENST00000497580.5
CDS CAA 72 bp GATCCTTCATGGTCCATATGTAGGTCCATTAGCATATaGGTGCGGCTTCTGCTCCGAGTTGCTATAGGTAAT +
Preference number: 6 (lower is better)
Translates to: DPSWSICRSISI*VRLLLRVAIGN
Trigger: ATTACCTATAGCAACTCGGAGCAGAAGCCGCACCAATATGCTAATGGACCTACATATGGACCATGAAGGATC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000265956.8
ENST00000297933.11
ENST00000312123.13
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000431329.5
ENST00000467750.5
ENST00000470056.5
ENST00000495955.5
ENST00000497580.5
CDS CAA 72 bp ACACAGACAGTGGTAAAGTATCGATTGGCCACTTCTTaGTCCCGCAAAACTCTTTGCAATAGCCTTTCCAGG +
Preference number: 6 (lower is better)
Translates to: TQTVVKYRLATS*SRKTLCNSLSR
Trigger: CCTGGAAAGGCTATTGCAAAGAGTTTTGCGGGACAAAGAAGTGGCCAATCGATACTTTACCACTGTCTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000297933.11
ENST00000312123.13
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000467707.1
ENST00000470056.5
ENST00000474637.5
ENST00000495955.5
CDS CAA 90 bp TCAGCAGGGGAAGCTTCAGCACTGGTTATGATAAGCCGATCCAAATaGATTCTCTGTTGCTTCGCAATCCATGCTGTACGATACAACTTT +
Preference number: 6 (lower is better)
Translates to: SAGEASALVMISRSK*ILCCFAIHAVRYNF
Trigger: AAAGTTGTATCGTACAGCATGGATTGCGAAGCAACAGAGAATCAATTTGGATCGGCTTATCATAACCAGTGCTGAAGCTTCCCCTGCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000297933.11
ENST00000312123.13
ENST00000394083.6
ENST00000394084.5
ENST00000394104.6
ENST00000394105.6
ENST00000461379.5
ENST00000467750.5
ENST00000470056.5
ENST00000495955.5
ENST00000497580.5
CDS CAA 90 bp TTGCTCTCAAGCAGTAATCTCACACAGACAGTGGTAAAGTATCGATaGGCCACTTCTTTGTCCCGCAAAACTCTTTGCAATAGCCTTTCC +
Preference number: 6 (lower is better)
Translates to: LLSSSNLTQTVVKYR*ATSLSRKTLCNSLS
Trigger: GGAAAGGCTATTGCAAAGAGTTTTGCGGGACAAAGAAGTGGCCAATCGATACTTTACCACTGTCTGTGTGAGATTACTGCTTGAGAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000297933.11
ENST00000312123.13
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000467707.1
ENST00000470056.5
ENST00000474637.5
ENST00000495955.5
CDS TCA 72 bp CTATCTGAGCCCTTCTCTCCAAAGAGTTTTTCCTGCTaGGATGGAGAGAACCTCTCAATTAGCTTGTTTGGA +
Preference number: 6 (lower is better)
Translates to: LSEPFSPKSFSC*DGENLSISLFG
Trigger: TCCAAACAAGCTAATTGAGAGGTTCTCTCCATCTCAGCAGGAAAAACTCTTTGGAGAGAAGGGCTCAGATAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000265956.8
ENST00000297933.11
ENST00000312123.13
ENST00000394083.6
ENST00000394084.5
ENST00000394104.6
ENST00000394105.6
ENST00000431329.5
ENST00000436712.2
ENST00000467750.5
ENST00000470056.5
ENST00000495955.5
ENST00000497580.5
CDS GCA 72 bp GTCATGATTATCACCTGTACTTTCATAGTTTGCCATTaGTCCATCACTGGGGCTGGTCCGTTTAATGGCATT +
Preference number: 6 (lower is better)
Translates to: VMIITCTFIVCH*SITGAGPFNGI
Trigger: AATGCCATTAAACGGACCAGCCCCAGTGATGGAGCAATGGCAAACTATGAAAGTACAGGTGATAATCATGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394104.6
ENST00000495955.5
CDS GCA 72 bp CTGGTGGGCACTAGAAGACAGCTGGATTCTCATGTCTaGTTCTGCTTCAATGTGTTGAAAATGTTGTTTTGG +
Preference number: 6 (lower is better)
Translates to: LVGTRRQLDSHV*FCFNVLKMLFW
Trigger: CCAAAACAACATTTTCAACACATTGAAGCAGAAGCAGACATGAGAATCCAGCTGTCTTCTAGTGCCCACCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394105.6
CDS CAA 72 bp GAAGCTTCAGCACTGGTTATGATAAGCCGATCCAAATaGATTCTCTGTTGCTTCGCAATCCATGCTGTACGA +
Preference number: 6 (lower is better)
Translates to: EASALVMISRSK*ILCCFAIHAVR
Trigger: TCGTACAGCATGGATTGCGAAGCAACAGAGAATCAATTTGGATCGGCTTATCATAACCAGTGCTGAAGCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000297933.11
ENST00000312123.13
ENST00000394083.6
ENST00000394084.5
ENST00000394104.6
ENST00000394105.6
ENST00000461379.5
ENST00000467750.5
ENST00000470056.5
ENST00000495955.5
ENST00000497580.5
CDS TCA 72 bp TCCAGCCTATCTACACAGGAGAGGGTTTTGTACATCTaGGACACGATCCACCTTAAACTATGTGGAAAACAA +
Preference number: 6 (lower is better)
Translates to: SSLSTQERVLYI*DTIHLKLCGKQ
Trigger: TTGTTTTCCACATAGTTTAAGGTGGATCGTGTCTCAGATGTACAAAACCCTCTCCTGTGTAGATAGGCTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000265956.8
ENST00000297933.11
ENST00000312123.13
ENST00000394083.6
ENST00000394084.5
ENST00000394104.6
ENST00000394105.6
ENST00000431329.5
ENST00000436712.2
ENST00000467750.5
ENST00000470056.5
ENST00000495955.5
ENST00000497580.5
CDS TCA 72 bp ATCACCAGAATGACAGTGTCAAAGTTCAGGGCAGACTaGATGGATGACGGATTTCTAAAGTGTTTGCACTCA +
Preference number: 6 (lower is better)
Translates to: ITRMTVSKFRAD*MDDGFLKCLHS
Trigger: TGAGTGCAAACACTTTAGAAATCCGTCATCCATTCAGTCTGCCCTGAACTTTGACACTGTCATTCTGGTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474637.5
CDS GCA 72 bp CTGCAAAAGGCGGCCTACCTGCATCAGATTAAATCGTaGTACTTCATTAATAGGAGCATCGGAAATTATTCC +
Preference number: 6 (lower is better)
Translates to: LQKAAYLHQIKS*YFINRSIGNYS
Trigger: GGAATAATTTCCGATGCTCCTATTAATGAAGTAGCACGATTTAATCTGATGCAGGTAGGCCGCCTTTTGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000265956.8
ENST00000297933.11
ENST00000312123.13
ENST00000394083.6
ENST00000394084.5
ENST00000394104.6
ENST00000394105.6
ENST00000431329.5
ENST00000436712.2
ENST00000467750.5
ENST00000470056.5
ENST00000495955.5
ENST00000497580.5
CDS GCA 72 bp ATCTCTGTCATGATTATCACCTGTACTTTCATAGTTTaGCATTGCTCCATCACTGGGGCTGGTCCGTTTAAT +
Preference number: 6 (lower is better)
Translates to: ISVMIITCTFIV*HCSITGAGPFN
Trigger: ATTAAACGGACCAGCCCCAGTGATGGAGCAATGGCAAACTATGAAAGTACAGGTGATAATCATGACAGAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394104.6
ENST00000495955.5
CDS GCA 72 bp GGCACTAGAAGACAGCTGGATTCTCATGTCTGCTTCTaGTTCAATGTGTTGAAAATGTTGTTTTGGCTGAAG +
Preference number: 6 (lower is better)
Translates to: GTRRQLDSHVCF*FNVLKMLFWLK
Trigger: CTTCAGCCAAAACAACATTTTCAACACATTGAAGCAGAAGCAGACATGAGAATCCAGCTGTCTTCTAGTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394105.6
CDS CAA 72 bp CCTGCTGAGATGGAGAGAACCTCTCAATTAGCTTGTTaGGATCTGTTTCCAGGTGATCTTCATCTTCAACAA +
Preference number: 6 (lower is better)
Translates to: PAEMERTSQLAC*DLFPGDLHLQQ
Trigger: TTGTTGAAGATGAAGATCACCTGGAAACAGATCCAAACAAGCTAATTGAGAGGTTCTCTCCATCTCAGCAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000265956.8
ENST00000297933.11
ENST00000312123.13
ENST00000394083.6
ENST00000394084.5
ENST00000394104.6
ENST00000394105.6
ENST00000431329.5
ENST00000436712.2
ENST00000467750.5
ENST00000470056.5
ENST00000495955.5
ENST00000497580.5
CDS CAA 72 bp AGCAGTAATCTCACACAGACAGTGGTAAAGTATCGATaGGCCACTTCTTTGTCCCGCAAAACTCTTTGCAAT +
Preference number: 6 (lower is better)
Translates to: SSNLTQTVVKYR*ATSLSRKTLCN
Trigger: ATTGCAAAGAGTTTTGCGGGACAAAGAAGTGGCCAATCGATACTTTACCACTGTCTGTGTGAGATTACTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000297933.11
ENST00000312123.13
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000467707.1
ENST00000470056.5
ENST00000474637.5
ENST00000495955.5
CDS CAA 90 bp AGCTTCAGCACTGGTTATGATAAGCCGATCCAAATTGATTCTCTGTaGCTTCGCAATCCATGCTGTACGATACAACTTTTCAGCTGTCTT +
Preference number: 6 (lower is better)
Translates to: SFSTGYDKPIQIDSL*LRNPCCTIQLFSCL
Trigger: AAGACAGCTGAAAAGTTGTATCGTACAGCATGGATTGCGAAGCAACAGAGAATCAATTTGGATCGGCTTATCATAACCAGTGCTGAAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000297933.11
ENST00000312123.13
ENST00000394083.6
ENST00000394084.5
ENST00000394104.6
ENST00000394105.6
ENST00000461379.5
ENST00000467750.5
ENST00000470056.5
ENST00000495955.5
ENST00000497580.5
CDS TCA 72 bp AATGACAGTGTCAAAGTTCAGGGCAGACTGAATGGATaGCGGATTTCTAAAGTGTTTGCACTCAAATCACTG +
Preference number: 6 (lower is better)
Translates to: NDSVKVQGRLNG*RISKVFALKSL
Trigger: CAGTGATTTGAGTGCAAACACTTTAGAAATCCGTCATCCATTCAGTCTGCCCTGAACTTTGACACTGTCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474637.5
CDS GCA 72 bp ATCGGAAATTATTCCATATTGTTCTGGATTGACAACTaGAGGACAAATGAAGCAGGCCAACAGGAGATCAGT +
Preference number: 6 (lower is better)
Translates to: IGNYSILFWIDN*RTNEAGQQEIS
Trigger: ACTGATCTCCTGTTGGCCTGCTTCATTTGTCCTGCAGTTGTCAATCCAGAACAATATGGAATAATTTCCGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000265956.8
ENST00000297933.11
ENST00000312123.13
ENST00000394083.6
ENST00000394084.5
ENST00000394104.6
ENST00000394105.6
ENST00000431329.5
ENST00000436712.2
ENST00000467750.5
ENST00000470056.5
ENST00000495955.5
ENST00000497580.5
CDS GCA 72 bp TTGAAGGACCTTCAGATATTCCTTCCAGATTATCACTaGAGAGGGAAAAGCGCAAGGTTTTATCAGGTTTAC +
Preference number: 6 (lower is better)
Translates to: LKDLQIFLPDYH*RGKSARFYQVY
Trigger: GTAAACCTGATAAAACCTTGCGCTTTTCCCTCTGCAGTGATAATCTGGAAGGAATATCTGAAGGTCCTTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000265956.8
ENST00000297933.11
ENST00000394104.6
ENST00000394105.6
ENST00000431329.5
ENST00000467750.5
ENST00000470056.5
ENST00000495955.5
ENST00000497580.5
CDS GCA 72 bp CCGATCCAAATTGATTCTCTGTTGCTTCGCAATCCATaGTGTACGATACAACTTTTCAGCTGTCTTAAGTAC +
Preference number: 6 (lower is better)
Translates to: PIQIDSLLLRNP*CTIQLFSCLKY
Trigger: GTACTTAAGACAGCTGAAAAGTTGTATCGTACAGCATGGATTGCGAAGCAACAGAGAATCAATTTGGATCGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000297933.11
ENST00000312123.13
ENST00000394083.6
ENST00000394084.5
ENST00000394104.6
ENST00000394105.6
ENST00000461379.5
ENST00000467750.5
ENST00000470056.5
ENST00000495955.5
ENST00000497580.5
CDS CAA 90 bp AAGATGCTGAAGGCACAAGTTCCTCTCCTCAAAAGTCGCCTAGGGTaGTCACTTTCTTTAAGTTCAAATTCAATCAAGTATCGCAAAACC +
Preference number: 6 (lower is better)
Translates to: KMLKAQVPLLKSRLG*SLSLSSNSIKYRKT
Trigger: GGTTTTGCGATACTTGATTGAATTTGAACTTAAAGAAAGTGACAACCCTAGGCGACTTTTGAGGAGAGGAACTTGTGCCTTCAGCATCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000265956.8
ENST00000297933.11
ENST00000312123.13
ENST00000394083.6
ENST00000394084.5
ENST00000394104.6
ENST00000394105.6
ENST00000431329.5
ENST00000467750.5
ENST00000470056.5
ENST00000495955.5
ENST00000497580.5
CDS CAA 90 bp ACTTCATTAATAGGAGCATCGGAAATTATTCCATATTGTTCTGGATaGACAACTGCAGGACAAATGAAGCAGGCCAACAGGAGATCAGTA +
Preference number: 6 (lower is better)
Translates to: TSLIGASEIIPYCSG*TTAGQMKQANRRSV
Trigger: TACTGATCTCCTGTTGGCCTGCTTCATTTGTCCTGCAGTTGTCAATCCAGAACAATATGGAATAATTTCCGATGCTCCTATTAATGAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000265956.8
ENST00000297933.11
ENST00000312123.13
ENST00000394083.6
ENST00000394084.5
ENST00000394104.6
ENST00000394105.6
ENST00000431329.5
ENST00000436712.2
ENST00000467750.5
ENST00000470056.5
ENST00000495955.5
ENST00000497580.5
CDS CAA 90 bp AAATCGTGCTACTTCATTAATAGGAGCATCGGAAATTATTCCATATaGTTCTGGATTGACAACTGCAGGACAAATGAAGCAGGCCAACAG +
Preference number: 6 (lower is better)
Translates to: KSCYFINRSIGNYSI*FWIDNCRTNEAGQQ
Trigger: CTGTTGGCCTGCTTCATTTGTCCTGCAGTTGTCAATCCAGAACAATATGGAATAATTTCCGATGCTCCTATTAATGAAGTAGCACGATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000265956.8
ENST00000297933.11
ENST00000312123.13
ENST00000394083.6
ENST00000394084.5
ENST00000394104.6
ENST00000394105.6
ENST00000431329.5
ENST00000436712.2
ENST00000467750.5
ENST00000470056.5
ENST00000495955.5
ENST00000497580.5
CDS TCA 72 bp GCTGTTTCTCAGAGTTTACATATAAGCGTTCCTGCTTaGGGTGATGAGCCAGAGTATGAATATCTAGTTTCA +
Preference number: 6 (lower is better)
Translates to: AVSQSLHISVPA*GDEPEYEYLVS
Trigger: TGAAACTAGATATTCATACTCTGGCTCATCACCTCAAGCAGGAACGCTTATATGTAAACTCTGAGAAACAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000297933.11
ENST00000312123.13
ENST00000394083.6
ENST00000394084.5
ENST00000394104.6
ENST00000394105.6
ENST00000461379.5
ENST00000467750.5
ENST00000470056.5
ENST00000495955.5
ENST00000497580.5
CDS TCA 72 bp AAAACGTACCACAATCACAAATGCAGCACTGTTTACTaGCAGGACCATTACTCTGTCAAAATCAGCACATCA +
Preference number: 6 (lower is better)
Translates to: KTYHNHKCSTVY*QDHYSVKISTS
Trigger: TGATGTGCTGATTTTGACAGAGTAATGGTCCTGTCAGTAAACAGTGCTGCATTTGTGATTGTGGTACGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474637.5
CDS GCA 72 bp TGTACGATACAACTTTTCAGCTGTCTTAAGTACATCTaGATTGAGCCTCTGAATGAGCTGTTTCTCAGAGTT +
Preference number: 6 (lower is better)
Translates to: CTIQLFSCLKYI*IEPLNELFLRV
Trigger: AACTCTGAGAAACAGCTCATTCAGAGGCTCAATGCAGATGTACTTAAGACAGCTGAAAAGTTGTATCGTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000297933.11
ENST00000312123.13
ENST00000394083.6
ENST00000394084.5
ENST00000394104.6
ENST00000394105.6
ENST00000461379.5
ENST00000467750.5
ENST00000470056.5
ENST00000495955.5
ENST00000497580.5
CDS GCA 72 bp CTGGTTATGATAAGCCGATCCAAATTGATTCTCTGTTaGTTCGCAATCCATGCTGTACGATACAACTTTTCA +
Preference number: 6 (lower is better)
Translates to: LVMISRSKLILC*FAIHAVRYNFS
Trigger: TGAAAAGTTGTATCGTACAGCATGGATTGCGAAGCAACAGAGAATCAATTTGGATCGGCTTATCATAACCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000297933.11
ENST00000312123.13
ENST00000394083.6
ENST00000394084.5
ENST00000394104.6
ENST00000394105.6
ENST00000461379.5
ENST00000467750.5
ENST00000470056.5
ENST00000495955.5
ENST00000497580.5
CDS CAA 72 bp ACTGGTTATGATAAGCCGATCCAAATTGATTCTCTGTaGCTTCGCAATCCATGCTGTACGATACAACTTTTC +
Preference number: 6 (lower is better)
Translates to: TGYDKPIQIDSL*LRNPCCTIQLF
Trigger: GAAAAGTTGTATCGTACAGCATGGATTGCGAAGCAACAGAGAATCAATTTGGATCGGCTTATCATAACCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000297933.11
ENST00000312123.13
ENST00000394083.6
ENST00000394084.5
ENST00000394104.6
ENST00000394105.6
ENST00000461379.5
ENST00000467750.5
ENST00000470056.5
ENST00000495955.5
ENST00000497580.5
CDS CAA 90 bp TTCAATCAAGTATCGCAAAACCTGAAGGAGGTAGCTTTCATCTTCTaGCATGATGCAATTGCCATACAGGGAGGTAAAAACTGTGTAAAT +
Preference number: 6 (lower is better)
Translates to: FNQVSQNLKEVAFIF*HDAIAIQGGKNCVN
Trigger: ATTTACACAGTTTTTACCTCCCTGTATGGCAATTGCATCATGCAAGAAGATGAAAGCTACCTCCTTCAGGTTTTGCGATACTTGATTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000265956.8
ENST00000297933.11
ENST00000312123.13
ENST00000394083.6
ENST00000394084.5
ENST00000394104.6
ENST00000394105.6
ENST00000467750.5
ENST00000470056.5
ENST00000495955.5
ENST00000497580.5
CDS CCA 72 bp GAGTATCTTCATACACAGATTTTCTTTACATTTAAGTaGTCTGGCATCTACATGCCTGTTACTTCTAATGGC +
Preference number: 6 (lower is better)
Translates to: EYLHTQIFFTFK*SGIYMPVTSNG
Trigger: GCCATTAGAAGTAACAGGCATGTAGATGCCAGACCACTTAAATGTAAAGAAAATCTGTGTATGAAGATACTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479511.1
CDS CAA 72 bp TACAAGTCCTATTATCAAAACGGCACACACAGCGCATaGTTTCTTGAAGTTGAGCCATTAGATTCTTATCTT +
Preference number: 6 (lower is better)
Translates to: YKSYYQNGTHSA*FLEVEPLDSYL
Trigger: AAGATAAGAATCTAATGGCTCAACTTCAAGAAACAATGCGCTGTGTGTGCCGTTTTGATAATAGGACTTGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000297933.11
ENST00000312123.13
ENST00000394083.6
ENST00000394104.6
ENST00000394105.6
ENST00000470056.5
ENST00000474637.5
ENST00000495955.5
CDS GCA 72 bp AAAATAGTAGTCAACTGGGTTGTTAAAGCAAGGGATTaGTATAGATCTACAGGACAAAGTTCCATAGTGAAA +
Preference number: 6 (lower is better)
Translates to: KIVVNWVVKARD*YRSTGQSSIVK
Trigger: TTTCACTATGGAACTTTGTCCTGTAGATCTATAGCAATCCCTTGCTTTAACAACCCAGTTGACTACTATTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474637.5