Pregenerated sensors for GAPT (Homo sapiens)
Ensembl gene IDs: ENSG00000175857Ensembl transcript IDs: ENST00000318469.2, ENST00000396776.6, ENST00000502276.6, ENST00000511930.2, ENST00000513924.2, ENST00000515443.2
Found 111 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGAACTCTGAGGGTACCACTTGTCTCCTGCACCACTTCAGGAGGTTaGAGGAGAGTCTGGCTGTCAGAGTCTAAGGGAGGGTGCCACCTG | + |
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Preference number: 1 (lower is better) Translates to: RTLRVPLVSCTTSGG*RRVWLSESKGGCHL Trigger: CAGGTGGCACCCTCCCTTAGACTCTGACAGCCAGACTCTCCTTCAACCTCCTGAAGTGGTGCAGGAGACAAGTGGTACCCTCAGAGTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396776.6 |
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| 3UTR TCA 90 bp | AGGGGACACAGGTACCACAGAGATAGTAACTGTAACAATCTTGGCTaGGAGTTACCAGACCTCAGAGGAGGAGCCCTGCCAGGCTGGGAC | + |
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Preference number: 1 (lower is better) Translates to: RGHRYHRDSNCNNLG*ELPDLRGGALPGWD Trigger: GTCCCAGCCTGGCAGGGCTCCTCCTCTGAGGTCTGGTAACTCTCAGCCAAGATTGTTACAGTTACTATCTCTGTGGTACCTGTGTCCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396776.6 |
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| 3UTR CCA 90 bp | ACATGTTCAGGTTTGTTATGTAGGAACACTTGTGACTTGGGGGTTTaGTGTACAGATTATTTCATCATGTGTGTACTAAGCATAGTACCT | + |
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Preference number: 1 (lower is better) Translates to: TCSGLLCRNTCDLGV*CTDYFIMCVLSIVP Trigger: AGGTACTATGCTTAGTACACACATGATGAAATAATCTGTACACCAAACCCCCAAGTCACAAGTGTTCCTACATAACAAACCTGAACATGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000318469.2 ENST00000396776.6 |
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| 3UTR-3UTR GCA 90 bp | TGGCTGTCAGAGTCTAAGGGAGGGTGCCACCTGGCTGGTGCTGGTGCTTCTGACGGCAAAAGAAATGTTTaGAGAGGCCCAGGTCAAGCA | + |
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Preference number: 2 (lower is better) Translates to: WLSESKGGCHLAGAGASDGKRNV*RGPGQA Trigger: TGCTTGACCTGGGCCTCTGCAAACATTTCTTTTGCC...GTCAGAAGCACCAGCACCAGCCAGGTGGCACCCTCCCTTAGACTCTGACAGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396776.6 |
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| 3UTR-3UTR TCA 90 bp | AGACCTCAGAGGAGGAGCCCTGCCAGGCTGGGACGCAGAACTCTGAGGGTACCACCACTTATCAGAACTTaGTTAAGAATGGCATCAGTA | + |
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Preference number: 2 (lower is better) Translates to: RPQRRSPARLGRRTLRVPPLIRT*LRMASV Trigger: TACTGATGCCATTCTTAATCAAGTTCTGATAAGTGG...TGGTACCCTCAGAGTTCTGCGTCCCAGCCTGGCAGGGCTCCTCCTCTGAGGTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396776.6 |
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| 3UTR-3UTR GCA 90 bp | AGACCTCAGAGGAGGAGCCCTGCCAGGCTGGGACGCAGAACTCTGAGGGTACCAGGGTATTATGTCTTTTaGAAAGAGGGGGCATTAAAA | + |
|
Preference number: 2 (lower is better) Translates to: RPQRRSPARLGRRTLRVPGYYVF*KEGALK Trigger: TTTTAATGCCCCCTCTTTGCAAAAGACATAATACCC...TGGTACCCTCAGAGTTCTGCGTCCCAGCCTGGCAGGGCTCCTCCTCTGAGGTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000396776.6 |
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| 3UTR-3UTR CCA 90 bp | CCTGCCAGGCTGGGACGCAGAACTCTGAGGGTACCACTTGTCTCCTGCACCACTTGTGACTTGGGGGTTTaGTGTACAGATTATTTCATC | + |
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Preference number: 2 (lower is better) Translates to: PARLGRRTLRVPLVSCTTCDLGV*CTDYFI Trigger: GATGAAATAATCTGTACACCAAACCCCCAAGTCACA...AGTGGTGCAGGAGACAAGTGGTACCCTCAGAGTTCTGCGTCCCAGCCTGGCAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000396776.6 |
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| 3UTR-3UTR TCA 90 bp | ATAGGCAGGAGCAATTCCCTGTTGCCTCCTACTGCCTTTCGGTCTTCCTTAGTGGAAGAACTTATGATCTaGAGCAGGCTTGAGAGAAGA | + |
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Preference number: 2 (lower is better) Translates to: IGRSNSLLPPTAFRSSLVEELMI*SRLERR Trigger: TCTTCTCTCAAGCCTGCTTCAGATCATAAGTTCTTC...CACTAAGGAAGACCGAAAGGCAGTAGGAGGCAACAGGGAATTGCTCCTGCCTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396776.6 |
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| 3UTR-3UTR CCA 90 bp | ATAGGCAGGAGCAATTCCCTGTTGCCTCCTACTGCCTTTCGGTCTTCCTTAGTGAGTAAGAGAAGTCACTaGAAAAGTGAATTGGAACCA | + |
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Preference number: 2 (lower is better) Translates to: IGRSNSLLPPTAFRSSLVSKRSH*KSELEP Trigger: TGGTTCCAATTCACTTTTCCAGTGACTTCTCTTACT...CACTAAGGAAGACCGAAAGGCAGTAGGAGGCAACAGGGAATTGCTCCTGCCTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396776.6 |
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| 3UTR CAA 90 bp | TTCAGGGGTACATGTTCAGGTTTGTTATGTAGGAACACTTGTGACTaGGGGGTTTGGTGTACAGATTATTTCATCATGTGTGTACTAAGC | + |
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Preference number: 2 (lower is better) Translates to: FRGTCSGLLCRNTCD*GVWCTDYFIMCVLS Trigger: GCTTAGTACACACATGATGAAATAATCTGTACACCAAACCCCCAAGTCACAAGTGTTCCTACATAACAAACCTGAACATGTACCCCTGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000318469.2 ENST00000396776.6 |
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| 3UTR-3UTR TCA 90 bp | AGAGTGGATTTAGAGATGAGCTATCATAGCTTCATGAGCAGCATCGTATTCATTGTGTGGAAGAACTTATaGTCTGAAGCAGGCTTGAGA | + |
|
Preference number: 2 (lower is better) Translates to: RVDLEMSYHSFMSSIVFIVWKNL*SEAGLR Trigger: TCTCAAGCCTGCTTCAGATCATAAGTTCTTCCACAC...AATGAATACGATGCTGCTCATGAAGCTATGATAGCTCATCTCTAAATCCACTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396776.6 |
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| 3UTR-3UTR TCA 90 bp | TGTACAATTCAATTCCCGTCAGTAAAACATGAGGCATTTAGTGCCTTATGTGATGTGTGGAAGAACTTATaGTCTGAAGCAGGCTTGAGA | + |
|
Preference number: 2 (lower is better) Translates to: CTIQFPSVKHEAFSALCDVWKNL*SEAGLR Trigger: TCTCAAGCCTGCTTCAGATCATAAGTTCTTCCACAC...ATCACATAAGGCACTAAATGCCTCATGTTTTACTGACGGGAATTGAATTGTACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000318469.2 ENST00000396776.6 |
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| 3UTR-3UTR TCA 90 bp | GTGGCAACATTCATATGTTTAAATGTCCTAAGAATTGAAGAGGCATCAAAGCTTAATGCGGGTTTGGAGTaGTTCAGGAGATGTGTGGAA | + |
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Preference number: 2 (lower is better) Translates to: VATFICLNVLRIEEASKLNAGLE*FRRCVE Trigger: TTCCACACATCTCCTGAATCACTCCAAACCCGCATT...AAGCTTTGATGCCTCTTCAATTCTTAGGACATTTAAACATATGAATGTTGCCAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000318469.2 ENST00000396776.6 |
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| 3UTR-3UTR CCA 90 bp | GTGGCAACATTCATATGTTTAAATGTCCTAAGAATTGAAGAGGCATCAAAGCTTGGAACACTTGTGACTTaGGGGTTTGGTGTACAGATT | + |
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Preference number: 2 (lower is better) Translates to: VATFICLNVLRIEEASKLGTLVT*GFGVQI Trigger: AATCTGTACACCAAACCCCCAAGTCACAAGTGTTCC...AAGCTTTGATGCCTCTTCAATTCTTAGGACATTTAAACATATGAATGTTGCCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000318469.2 ENST00000396776.6 |
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| 3UTR-3UTR CCA 90 bp | GTAAGAGAAGTCACTGGAAAAGTGAATTGGAACCAATTGTGGAAAACCATAAATGGAACACTTGTGACTTaGGGGTTTGGTGTACAGATT | + |
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Preference number: 2 (lower is better) Translates to: VREVTGKVNWNQLWKTINGTLVT*GFGVQI Trigger: AATCTGTACACCAAACCCCCAAGTCACAAGTGTTCC...ATTTATGGTTTTCCACAATTGGTTCCAATTCACTTTTCCAGTGACTTCTCTTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000318469.2 ENST00000396776.6 |
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| 3UTR-3UTR CCA 90 bp | TGTACAATTCAATTCCCGTCAGTAAAACATGAGGCATTTAGTGCCTTATGTGATAATACAGATTTAGTCTaGTGCAAGGAGGGTGGAGAA | + |
|
Preference number: 2 (lower is better) Translates to: CTIQFPSVKHEAFSALCDNTDLV*CKEGGE Trigger: TTCTCCACCCTCCTTGCACCAGACTAAATCTGTATT...ATCACATAAGGCACTAAATGCCTCATGTTTTACTGACGGGAATTGAATTGTACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000318469.2 ENST00000396776.6 |
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| 3UTR-3UTR TCA 90 bp | AGAGTGGATTTAGAGATGAGCTATCATAGCTTCATGAGCAGCATCGTATTCATTGCTCCCACTTTTAAGTaGGAATATGTGGTATTTGAT | + |
|
Preference number: 2 (lower is better) Translates to: RVDLEMSYHSFMSSIVFIAPTFK*EYVVFD Trigger: ATCAAATACCACATATTCTCACTTAAAAGTGGGAGC...AATGAATACGATGCTGCTCATGAAGCTATGATAGCTCATCTCTAAATCCACTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396776.6 |
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| 3UTR-3UTR TCA 90 bp | TGTACAATTCAATTCCCGTCAGTAAAACATGAGGCATTTAGTGCCTTATGTGATCTGAAGGCAAAGAAATaGGAGATAGTAAGAGAAGTC | + |
|
Preference number: 2 (lower is better) Translates to: CTIQFPSVKHEAFSALCDLKAKK*EIVREV Trigger: GACTTCTCTTACTATCTCTCATTTCTTTGCCTTCAG...ATCACATAAGGCACTAAATGCCTCATGTTTTACTGACGGGAATTGAATTGTACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000318469.2 ENST00000396776.6 |
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| 3UTR-3UTR CCA 90 bp | TGTACAATTCAATTCCCGTCAGTAAAACATGAGGCATTTAGTGCCTTATGTGATTGTGACTTGGGGGTTTaGTGTACAGATTATTTCATC | + |
|
Preference number: 2 (lower is better) Translates to: CTIQFPSVKHEAFSALCDCDLGV*CTDYFI Trigger: GATGAAATAATCTGTACACCAAACCCCCAAGTCACA...ATCACATAAGGCACTAAATGCCTCATGTTTTACTGACGGGAATTGAATTGTACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000318469.2 ENST00000396776.6 |
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| 3UTR-3UTR TCA 90 bp | GTGGCAACATTCATATGTTTAAATGTCCTAAGAATTGAAGAGGCATCAAAGCTTAAGTCACTGGAAAAGTaGATTGGAACCAATTGTGGA | + |
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Preference number: 2 (lower is better) Translates to: VATFICLNVLRIEEASKLKSLEK*IGTNCG Trigger: TCCACAATTGGTTCCAATTCACTTTTCCAGTGACTT...AAGCTTTGATGCCTCTTCAATTCTTAGGACATTTAAACATATGAATGTTGCCAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000318469.2 ENST00000396776.6 |
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| 3UTR-3UTR TCA 90 bp | GTGGCAACATTCATATGTTTAAATGTCCTAAGAATTGAAGAGGCATCAAAGCTTCTGAAGGCAAAGAAATaGGAGATAGTAAGAGAAGTC | + |
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Preference number: 2 (lower is better) Translates to: VATFICLNVLRIEEASKLLKAKK*EIVREV Trigger: GACTTCTCTTACTATCTCTCATTTCTTTGCCTTCAG...AAGCTTTGATGCCTCTTCAATTCTTAGGACATTTAAACATATGAATGTTGCCAC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000318469.2 ENST00000396776.6 |
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| 3UTR-3UTR CCA 90 bp | TGTACAATTCAATTCCCGTCAGTAAAACATGAGGCATTTAGTGCCTTATGTGATACTGGAAAAGTGAATTaGAACCAATTGTGGAAAACC | + |
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Preference number: 2 (lower is better) Translates to: CTIQFPSVKHEAFSALCDTGKVN*NQLWKT Trigger: GGTTTTCCACAATTGGTTCCAATTCACTTTTCCAGT...ATCACATAAGGCACTAAATGCCTCATGTTTTACTGACGGGAATTGAATTGTACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000318469.2 ENST00000396776.6 |
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| 3UTR-3UTR CCA 90 bp | GTCAAGCAATTCAGAGGAGCAAATAAAAGAGTGGATTTAGAGATGAGCTATCATACTGGAAAAGTGAATTaGAACCAATTGTGGAAAACC | + |
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Preference number: 2 (lower is better) Translates to: VKQFRGANKRVDLEMSYHTGKVN*NQLWKT Trigger: GGTTTTCCACAATTGGTTCCAATTCACTTTTCCAGT...ATGATAGCTCATCTCTAAATCCACTCTTTTATTTGCTCCTCTGAATTGCTTGAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000396776.6 |
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| 3UTR CAA 90 bp | ATTCAGAAAGGTGGAGATAGGCAGAGACCATCCACTTATCAGAACTaGATTAAGAATGGCATCAGTACAATAAAAATCACAGTGAATTAT | + |
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Preference number: 2 (lower is better) Translates to: IQKGGDRQRPSTYQN*IKNGISTIKITVNY Trigger: ATAATTCACTGTGATTTTTATTGTACTGATGCCATTCTTAATCAAGTTCTGATAAGTGGATGGTCTCTGCCTATCTCCACCTTTCTGAAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000318469.2 ENST00000396776.6 |
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| 3UTR-3UTR TCA 90 bp | GTAAGAGAAGTCACTGGAAAAGTGAATTGGAACCAATTGTGGAAAACCATAAATGCTCCCACTTTTAAGTaGGAATATGTGGTATTTGAT | + |
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Preference number: 2 (lower is better) Translates to: VREVTGKVNWNQLWKTINAPTFK*EYVVFD Trigger: ATCAAATACCACATATTCTCACTTAAAAGTGGGAGC...ATTTATGGTTTTCCACAATTGGTTCCAATTCACTTTTCCAGTGACTTCTCTTAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000318469.2 ENST00000396776.6 |
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| 3UTR-3UTR TCA 90 bp | GTGGCAACATTCATATGTTTAAATGTCCTAAGAATTGAAGAGGCATCAAAGCTTCCACTTATCAGAACTTaGTTAAGAATGGCATCAGTA | + |
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Preference number: 2 (lower is better) Translates to: VATFICLNVLRIEEASKLPLIRT*LRMASV Trigger: TACTGATGCCATTCTTAATCAAGTTCTGATAAGTGG...AAGCTTTGATGCCTCTTCAATTCTTAGGACATTTAAACATATGAATGTTGCCAC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000318469.2 ENST00000396776.6 |
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| 3UTR-3UTR GCA 90 bp | GTGGCAACATTCATATGTTTAAATGTCCTAAGAATTGAAGAGGCATCAAAGCTTGGGTATTATGTCTTTTaGAAAGAGGGGGCATTAAAA | + |
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Preference number: 2 (lower is better) Translates to: VATFICLNVLRIEEASKLGYYVF*KEGALK Trigger: TTTTAATGCCCCCTCTTTGCAAAAGACATAATACCC...AAGCTTTGATGCCTCTTCAATTCTTAGGACATTTAAACATATGAATGTTGCCAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000318469.2 ENST00000396776.6 |
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| 3UTR-3UTR CCA 90 bp | GTGGCAACATTCATATGTTTAAATGTCCTAAGAATTGAAGAGGCATCAAAGCTTAGTAAGAGAAGTCACTaGAAAAGTGAATTGGAACCA | + |
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Preference number: 2 (lower is better) Translates to: VATFICLNVLRIEEASKLSKRSH*KSELEP Trigger: TGGTTCCAATTCACTTTTCCAGTGACTTCTCTTACT...AAGCTTTGATGCCTCTTCAATTCTTAGGACATTTAAACATATGAATGTTGCCAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000318469.2 ENST00000396776.6 |
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| 3UTR TCA 72 bp | AGAGGAGGAGCCCTGCCAGGCTGGGACGCAGAACTCTaGGGGTACCACTTGTCTCCTGCACCACTTCAGGAG | + |
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Preference number: 3 (lower is better) Translates to: RGGALPGWDAEL*GYHLSPAPLQE Trigger: CTCCTGAAGTGGTGCAGGAGACAAGTGGTACCCTCAGAGTTCTGCGTCCCAGCCTGGCAGGGCTCCTCCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396776.6 |
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| 3UTR GCA 72 bp | TTGGCTGAGAGTTACCAGACCTCAGAGGAGGAGCCCTaGCAGGCTGGGACGCAGAACTCTGAGGGTACCACT | + |
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Preference number: 3 (lower is better) Translates to: LAESYQTSEEEP*QAGTQNSEGTT Trigger: AGTGGTACCCTCAGAGTTCTGCGTCCCAGCCTGGCAGGGCTCCTCCTCTGAGGTCTGGTAACTCTCAGCCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396776.6 |
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| 3UTR TCA 72 bp | AGGTACCACAGAGATAGTAACTGTAACAATCTTGGCTaGGAGTTACCAGACCTCAGAGGAGGAGCCCTGCCA | + |
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Preference number: 3 (lower is better) Translates to: RYHRDSNCNNLG*ELPDLRGGALP Trigger: TGGCAGGGCTCCTCCTCTGAGGTCTGGTAACTCTCAGCCAAGATTGTTACAGTTACTATCTCTGTGGTACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396776.6 |
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| 3UTR TCA 72 bp | GCTTCTGACAGGTTGCAGAGAAGCTGGTCCTGGGAATaGTGGAAGAAACTAGAAAGCTGCAAACAACCAGTG | + |
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Preference number: 3 (lower is better) Translates to: ASDRLQRSWSWE*WKKLESCKQPV Trigger: CACTGGTTGTTTGCAGCTTTCTAGTTTCTTCCATCATTCCCAGGACCAGCTTCTCTGCAACCTGTCAGAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396776.6 |
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| 3UTR-3UTR CAA 90 bp | TGTACAATTCAATTCCCGTCAGTAAAACATGAGGCATTTAGTGCCTTATGTGATAGGCCCCAGTGTCTGTaGTTCCTCTCCTTCTCTCCA | + |
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Preference number: 3 (lower is better) Translates to: CTIQFPSVKHEAFSALCDRPQCL*FLSFSP Trigger: TGGAGAGAAGGAGAGGAACAACAGACACTGGGGCCT...ATCACATAAGGCACTAAATGCCTCATGTTTTACTGACGGGAATTGAATTGTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000318469.2 ENST00000396776.6 |
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| 3UTR-3UTR CAA 90 bp | GTAAGAGAAGTCACTGGAAAAGTGAATTGGAACCAATTGTGGAAAACCATAAATAGGCCCCAGTGTCTGTaGTTCCTCTCCTTCTCTCCA | + |
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Preference number: 3 (lower is better) Translates to: VREVTGKVNWNQLWKTINRPQCL*FLSFSP Trigger: TGGAGAGAAGGAGAGGAACAACAGACACTGGGGCCT...ATTTATGGTTTTCCACAATTGGTTCCAATTCACTTTTCCAGTGACTTCTCTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000318469.2 ENST00000396776.6 |
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| 3UTR CCA 72 bp | CATGTTCAGGTTTGTTATGTAGGAACACTTGTGACTTaGGGGTTTGGTGTACAGATTATTTCATCATGTGTG | + |
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Preference number: 3 (lower is better) Translates to: HVQVCYVGTLVT*GFGVQIISSCV Trigger: CACACATGATGAAATAATCTGTACACCAAACCCCCAAGTCACAAGTGTTCCTACATAACAAACCTGAACATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000318469.2 ENST00000396776.6 |
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| 3UTR CCA 72 bp | GAGGCATTTAGTGCCTTATGTGATGTTCTAGGCATTTaGGCAGTTTCTTTTCATTTAGGTGGGAATTTAAGA | + |
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Preference number: 3 (lower is better) Translates to: EAFSALCDVLGI*AVSFHLGGNLR Trigger: TCTTAAATTCCCACCTAAATGAAAAGAAACTGCCCAAATGCCTAGAACATCACATAAGGCACTAAATGCCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000318469.2 ENST00000396776.6 |
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| 3UTR TCA 72 bp | GTATGTGTACCACATTTTCTTTATCCAGTCTACAGTTaGTCAACATTTAGTTTGATTCCTTGTCTTTGCTGT | + |
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Preference number: 3 (lower is better) Translates to: VCVPHFLYPVYS*STFSLIPCLCC Trigger: ACAGCAAAGACAAGGAATCAAACTAAATGTTGATCAACTGTAGACTGGATAAAGAAAATGTGGTACACATAC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000318469.2 ENST00000396776.6 |
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| CDS-3UTR TCA 90 bp | AGACCTCAGAGGAGGAGCCCTGCCAGGCTGGGACGCAGAACTCTGAGGGTACCAAGCTGGTCCTGGGAATaGTGGAAGAAACTAGAAAGC | + |
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Preference number: 4 (lower is better) Translates to: RPQRRSPARLGRRTLRVPSWSWE*WKKLES Trigger: GCTTTCTAGTTTCTTCCATCATTCCCAGGACCAGCT...TGGTACCCTCAGAGTTCTGCGTCCCAGCCTGGCAGGGCTCCTCCTCTGAGGTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396776.6 |
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| CDS-3UTR TCA 90 bp | AGACCTCAGAGGAGGAGCCCTGCCAGGCTGGGACGCAGAACTCTGAGGGTACCAGTGTGGAAGAACTTATaGTCTGAAGCAGGCTTGAGA | + |
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Preference number: 4 (lower is better) Translates to: RPQRRSPARLGRRTLRVPVWKNL*SEAGLR Trigger: TCTCAAGCCTGCTTCAGATCATAAGTTCTTCCACAC...TGGTACCCTCAGAGTTCTGCGTCCCAGCCTGGCAGGGCTCCTCCTCTGAGGTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396776.6 |
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| CDS-3UTR GCA 90 bp | ATAGGCAGGAGCAATTCCCTGTTGCCTCCTACTGCCTTTCGGTCTTCCTTAGTGGAGTCTAAGGGAGGGTaGCACCTGGCTGGTGCTGGT | + |
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Preference number: 4 (lower is better) Translates to: IGRSNSLLPPTAFRSSLVESKGG*HLAGAG Trigger: ACCAGCACCAGCCAGGTGGCACCCTCCCTTAGACTC...CACTAAGGAAGACCGAAAGGCAGTAGGAGGCAACAGGGAATTGCTCCTGCCTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396776.6 |
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| CDS-3UTR CCA 90 bp | CCTGCCAGGCTGGGACGCAGAACTCTGAGGGTACCACTTGTCTCCTGCACCACTGGAACACTTGTGACTTaGGGGTTTGGTGTACAGATT | + |
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Preference number: 4 (lower is better) Translates to: PARLGRRTLRVPLVSCTTGTLVT*GFGVQI Trigger: AATCTGTACACCAAACCCCCAAGTCACAAGTGTTCC...AGTGGTGCAGGAGACAAGTGGTACCCTCAGAGTTCTGCGTCCCAGCCTGGCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396776.6 |
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| 3UTR CAA 72 bp | GGGGCAACAGAAAGAATAGGCAGGAGCAATTCCCTGTaGCCTCCTACTGCCTTTCGGTCTTCCTTAGTGCCC | + |
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Preference number: 4 (lower is better) Translates to: GATERIGRSNSL*PPTAFRSSLVP Trigger: GGGCACTAAGGAAGACCGAAAGGCAGTAGGAGGCAACAGGGAATTGCTCCTGCCTATTCTTTCTGTTGCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396776.6 |
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| CDS-3UTR CCA 90 bp | TGGCTGTCAGAGTCTAAGGGAGGGTGCCACCTGGCTGGTGCTGGTGCTTCTGACACAACACCTCAAGATTaGTGTGTCAAGCTCTCTCTT | + |
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Preference number: 4 (lower is better) Translates to: WLSESKGGCHLAGAGASDTTPQD*CVKLSL Trigger: AAGAGAGAGCTTGACACACCAATCTTGAGGTGTTGT...GTCAGAAGCACCAGCACCAGCCAGGTGGCACCCTCCCTTAGACTCTGACAGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396776.6 |
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| CDS-3UTR CCA 90 bp | AGACCTCAGAGGAGGAGCCCTGCCAGGCTGGGACGCAGAACTCTGAGGGTACCATGGCTAAACAGGCATTaGCAGGATGGAAAAACAAAA | + |
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Preference number: 4 (lower is better) Translates to: RPQRRSPARLGRRTLRVPWLNRH*QDGKTK Trigger: TTTTGTTTTTCCATCCTGCCAATGCCTGTTTAGCCA...TGGTACCCTCAGAGTTCTGCGTCCCAGCCTGGCAGGGCTCCTCCTCTGAGGTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000396776.6 |
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| CDS-3UTR TCA 90 bp | TGGCTGTCAGAGTCTAAGGGAGGGTGCCACCTGGCTGGTGCTGGTGCTTCTGACCTGAAGGCAAAGAAATaGGAGATAGTAAGAGAAGTC | + |
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Preference number: 4 (lower is better) Translates to: WLSESKGGCHLAGAGASDLKAKK*EIVREV Trigger: GACTTCTCTTACTATCTCTCATTTCTTTGCCTTCAG...GTCAGAAGCACCAGCACCAGCCAGGTGGCACCCTCCCTTAGACTCTGACAGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396776.6 |
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| CDS-3UTR CCA 90 bp | TGGCTGTCAGAGTCTAAGGGAGGGTGCCACCTGGCTGGTGCTGGTGCTTCTGACTGTGACTTGGGGGTTTaGTGTACAGATTATTTCATC | + |
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Preference number: 4 (lower is better) Translates to: WLSESKGGCHLAGAGASDCDLGV*CTDYFI Trigger: GATGAAATAATCTGTACACCAAACCCCCAAGTCACA...GTCAGAAGCACCAGCACCAGCCAGGTGGCACCCTCCCTTAGACTCTGACAGCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000396776.6 |
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| 3UTR CAA 72 bp | GACACAGGTACCACAGAGATAGTAACTGTAACAATCTaGGCTGAGAGTTACCAGACCTCAGAGGAGGAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: DTGTTEIVTVTI*AESYQTSEEEP Trigger: GGGCTCCTCCTCTGAGGTCTGGTAACTCTCAGCCAAGATTGTTACAGTTACTATCTCTGTGGTACCTGTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396776.6 |
||
| CDS-3UTR TCA 90 bp | GCCCAGGTCAAGCAATTCAGAGGAGCAAATAAAAGAGTGGATTTAGAGATGAGCACCACTTCAGGAGGTTaGAGGAGAGTCTGGCTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: AQVKQFRGANKRVDLEMSTTSGG*RRVWLS Trigger: TGACAGCCAGACTCTCCTTCAACCTCCTGAAGTGGT...GCTCATCTCTAAATCCACTCTTTTATTTGCTCCTCTGAATTGCTTGACCTGGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396776.6 |
||
| CDS-3UTR GCA 90 bp | TGTACAATTCAATTCCCGTCAGTAAAACATGAGGCATTTAGTGCCTTATGTGATTCAGAGGAGGAGCCCTaGCAGGCTGGGACGCAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: CTIQFPSVKHEAFSALCDSEEEP*QAGTQN Trigger: GTTCTGCGTCCCAGCCTGGCAGGGCTCCTCCTCTGA...ATCACATAAGGCACTAAATGCCTCATGTTTTACTGACGGGAATTGAATTGTACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396776.6 |
||
| CDS-3UTR CCA 90 bp | GTCAAGCAATTCAGAGGAGCAAATAAAAGAGTGGATTTAGAGATGAGCTATCATAGGGAGGGTGCCACCTaGCTGGTGCTGGTGCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VKQFRGANKRVDLEMSYHREGAT*LVLVLL Trigger: CAGAAGCACCAGCACCAGCCAGGTGGCACCCTCCCT...ATGATAGCTCATCTCTAAATCCACTCTTTTATTTGCTCCTCTGAATTGCTTGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396776.6 |
||
| CDS-3UTR TCA 90 bp | ATAGGCAGGAGCAATTCCCTGTTGCCTCCTACTGCCTTTCGGTCTTCCTTAGTGAAGTCACTGGAAAAGTaGATTGGAACCAATTGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: IGRSNSLLPPTAFRSSLVKSLEK*IGTNCG Trigger: TCCACAATTGGTTCCAATTCACTTTTCCAGTGACTT...CACTAAGGAAGACCGAAAGGCAGTAGGAGGCAACAGGGAATTGCTCCTGCCTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396776.6 |
||
| CDS-3UTR TCA 90 bp | GTAAGAGAAGTCACTGGAAAAGTGAATTGGAACCAATTGTGGAAAACCATAAATCATGCCTTAAGCCAATaGTGCGGGGGCCCAAGAATG | + |
|
Preference number: 4 (lower is better) Translates to: VREVTGKVNWNQLWKTINHALSQ*CGGPRM Trigger: CATTCTTGGGCCCCCGCATCATTGGCTTAAGGCATG...ATTTATGGTTTTCCACAATTGGTTCCAATTCACTTTTCCAGTGACTTCTCTTAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000318469.2 ENST00000396776.6 |
||
| CDS-3UTR TCA 90 bp | AGAATAGAATGGATCCACCTGGCAAAAGAAATGTTTGCAGAGGCCCAGGTCAAGCCACTTATCAGAACTTaGTTAAGAATGGCATCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: RIEWIHLAKEMFAEAQVKPLIRT*LRMASV Trigger: TACTGATGCCATTCTTAATCAAGTTCTGATAAGTGG...CTTGACCTGGGCCTCTGCAAACATTTCTTTTGCCAGGTGGATCCATTCTATTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396776.6 |
||
| CDS-3UTR GCA 90 bp | GTCAAGCAATTCAGAGGAGCAAATAAAAGAGTGGATTTAGAGATGAGCTATCATCCTGTTGCCTCCTACTaGCTTTCGGTCTTCCTTAGT | + |
|
Preference number: 4 (lower is better) Translates to: VKQFRGANKRVDLEMSYHPVASY*LSVFLS Trigger: ACTAAGGAAGACCGAAAGGCAGTAGGAGGCAACAGG...ATGATAGCTCATCTCTAAATCCACTCTTTTATTTGCTCCTCTGAATTGCTTGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396776.6 |
||
| CDS-3UTR TCA 90 bp | GTGGCAACATTCATATGTTTAAATGTCCTAAGAATTGAAGAGGCATCAAAGCTTGGCTCTCTTCGTGTGTaGTGCTCTTCACATTACAGC | + |
|
Preference number: 4 (lower is better) Translates to: VATFICLNVLRIEEASKLGSLRV*CSSHYS Trigger: GCTGTAATGTGAAGAGCATCACACACGAAGAGAGCC...AAGCTTTGATGCCTCTTCAATTCTTAGGACATTTAAACATATGAATGTTGCCAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000318469.2 ENST00000396776.6 |
||
| CDS-3UTR TCA 90 bp | TGTACAATTCAATTCCCGTCAGTAAAACATGAGGCATTTAGTGCCTTATGTGATAATGCGGGTTTGGAGTaGTTCAGGAGATGTGTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: CTIQFPSVKHEAFSALCDNAGLE*FRRCVE Trigger: TTCCACACATCTCCTGAATCACTCCAAACCCGCATT...ATCACATAAGGCACTAAATGCCTCATGTTTTACTGACGGGAATTGAATTGTACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000318469.2 ENST00000396776.6 |
||
| CDS-3UTR GCA 90 bp | GCCCAGGTCAAGCAATTCAGAGGAGCAAATAAAAGAGTGGATTTAGAGATGAGCTACAGACTTTTCTCCTaGTGCTTCTCCTTTGTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: AQVKQFRGANKRVDLEMSYRLFS*CFSFVK Trigger: TTTTACAAAGGAGAAGCAGCAGGAGAAAAGTCTGTA...GCTCATCTCTAAATCCACTCTTTTATTTGCTCCTCTGAATTGCTTGACCTGGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000396776.6 |
||
| CDS-3UTR TCA 90 bp | TGTACAATTCAATTCCCGTCAGTAAAACATGAGGCATTTAGTGCCTTATGTGATTGTAACAATCTTGGCTaGGAGTTACCAGACCTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: CTIQFPSVKHEAFSALCDCNNLG*ELPDLR Trigger: TCTGAGGTCTGGTAACTCTCAGCCAAGATTGTTACA...ATCACATAAGGCACTAAATGCCTCATGTTTTACTGACGGGAATTGAATTGTACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396776.6 |
||
| CDS-3UTR GCA 90 bp | GTGGCAACATTCATATGTTTAAATGTCCTAAGAATTGAAGAGGCATCAAAGCTTGGCAAAAGAAATGTTTaGAGAGGCCCAGGTCAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: VATFICLNVLRIEEASKLGKRNV*RGPGQA Trigger: TGCTTGACCTGGGCCTCTGCAAACATTTCTTTTGCC...AAGCTTTGATGCCTCTTCAATTCTTAGGACATTTAAACATATGAATGTTGCCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396776.6 |
||
| CDS-3UTR CCA 90 bp | TGTACAATTCAATTCCCGTCAGTAAAACATGAGGCATTTAGTGCCTTATGTGATCTGACAGCAGATTTGTaGTCTTGGGTTTCAACTGAG | + |
|
Preference number: 4 (lower is better) Translates to: CTIQFPSVKHEAFSALCDLTADL*SWVSTE Trigger: CTCAGTTGAAACCCAAGACCACAAATCTGCTGTCAG...ATCACATAAGGCACTAAATGCCTCATGTTTTACTGACGGGAATTGAATTGTACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000318469.2 ENST00000396776.6 |
||
| CDS-3UTR TCA 90 bp | TGTACAATTCAATTCCCGTCAGTAAAACATGAGGCATTTAGTGCCTTATGTGATGAAGAACTTATGATCTaGAGCAGGCTTGAGAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: CTIQFPSVKHEAFSALCDEELMI*SRLERR Trigger: TCTTCTCTCAAGCCTGCTTCAGATCATAAGTTCTTC...ATCACATAAGGCACTAAATGCCTCATGTTTTACTGACGGGAATTGAATTGTACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000318469.2 ENST00000396776.6 |
||
| CDS-3UTR TCA 90 bp | GTCAAGCAATTCAGAGGAGCAAATAAAAGAGTGGATTTAGAGATGAGCTATCATGAAGAACTTATGATCTaGAGCAGGCTTGAGAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: VKQFRGANKRVDLEMSYHEELMI*SRLERR Trigger: TCTTCTCTCAAGCCTGCTTCAGATCATAAGTTCTTC...ATGATAGCTCATCTCTAAATCCACTCTTTTATTTGCTCCTCTGAATTGCTTGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396776.6 |
||
| CDS-3UTR GCA 90 bp | TGTACAATTCAATTCCCGTCAGTAAAACATGAGGCATTTAGTGCCTTATGTGATAGCTTTGGGAGGACCTaGTTCCACATTTTCATAGTT | + |
|
Preference number: 4 (lower is better) Translates to: CTIQFPSVKHEAFSALCDSFGRT*FHIFIV Trigger: AACTATGAAAATGTGGAAGCAGGTCCTCCCAAAGCT...ATCACATAAGGCACTAAATGCCTCATGTTTTACTGACGGGAATTGAATTGTACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000318469.2 ENST00000396776.6 |
||
| CDS-3UTR CCA 90 bp | TGTACAATTCAATTCCCGTCAGTAAAACATGAGGCATTTAGTGCCTTATGTGATCTTATTTCTGGAAGATaGCTCTCTTCGTGTGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: CTIQFPSVKHEAFSALCDLISGR*LSSCVM Trigger: CATCACACACGAAGAGAGCCATCTTCCAGAAATAAG...ATCACATAAGGCACTAAATGCCTCATGTTTTACTGACGGGAATTGAATTGTACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000318469.2 ENST00000396776.6 |
||
| 3UTR CAA 72 bp | ACATGTTCAGGTTTGTTATGTAGGAACACTTGTGACTaGGGGGTTTGGTGTACAGATTATTTCATCATGTGT | + |
|
Preference number: 4 (lower is better) Translates to: TCSGLLCRNTCD*GVWCTDYFIMC Trigger: ACACATGATGAAATAATCTGTACACCAAACCCCCAAGTCACAAGTGTTCCTACATAACAAACCTGAACATGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000318469.2 ENST00000396776.6 |
||
| CDS-3UTR GCA 90 bp | GTAAGAGAAGTCACTGGAAAAGTGAATTGGAACCAATTGTGGAAAACCATAAATAGCTTTGGGAGGACCTaGTTCCACATTTTCATAGTT | + |
|
Preference number: 4 (lower is better) Translates to: VREVTGKVNWNQLWKTINSFGRT*FHIFIV Trigger: AACTATGAAAATGTGGAAGCAGGTCCTCCCAAAGCT...ATTTATGGTTTTCCACAATTGGTTCCAATTCACTTTTCCAGTGACTTCTCTTAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000318469.2 ENST00000396776.6 |
||
| CDS-3UTR GCA 90 bp | GTCAAGCAATTCAGAGGAGCAAATAAAAGAGTGGATTTAGAGATGAGCTATCATAAGAAACTAGAAAGCTaGAAACAACCAGTGATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VKQFRGANKRVDLEMSYHKKLES*KQPVML Trigger: CAGCATCACTGGTTGTTTGCAGCTTTCTAGTTTCTT...ATGATAGCTCATCTCTAAATCCACTCTTTTATTTGCTCCTCTGAATTGCTTGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396776.6 |
||
| CDS-3UTR CCA 90 bp | GTAAGAGAAGTCACTGGAAAAGTGAATTGGAACCAATTGTGGAAAACCATAAATCTTATTTCTGGAAGATaGCTCTCTTCGTGTGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: VREVTGKVNWNQLWKTINLISGR*LSSCVM Trigger: CATCACACACGAAGAGAGCCATCTTCCAGAAATAAG...ATTTATGGTTTTCCACAATTGGTTCCAATTCACTTTTCCAGTGACTTCTCTTAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000318469.2 ENST00000396776.6 |
||
| CDS-3UTR CCA 90 bp | TGTACAATTCAATTCCCGTCAGTAAAACATGAGGCATTTAGTGCCTTATGTGATGCAGATTTGTGGTCTTaGGTTTCAACTGAGATTTCA | + |
|
Preference number: 4 (lower is better) Translates to: CTIQFPSVKHEAFSALCDADLWS*VSTEIS Trigger: TGAAATCTCAGTTGAAACCCAAGACCACAAATCTGC...ATCACATAAGGCACTAAATGCCTCATGTTTTACTGACGGGAATTGAATTGTACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000318469.2 ENST00000396776.6 |
||
| CDS-3UTR CCA 90 bp | GTAAGAGAAGTCACTGGAAAAGTGAATTGGAACCAATTGTGGAAAACCATAAATAATACAGATTTAGTCTaGTGCAAGGAGGGTGGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: VREVTGKVNWNQLWKTINNTDLV*CKEGGE Trigger: TTCTCCACCCTCCTTGCACCAGACTAAATCTGTATT...ATTTATGGTTTTCCACAATTGGTTCCAATTCACTTTTCCAGTGACTTCTCTTAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000318469.2 ENST00000396776.6 |
||
| CDS-3UTR CCA 90 bp | TGTACAATTCAATTCCCGTCAGTAAAACATGAGGCATTTAGTGCCTTATGTGATTTTTTGGTTAAATGGTaGGCAGGGTTCAGGTCATTT | + |
|
Preference number: 4 (lower is better) Translates to: CTIQFPSVKHEAFSALCDFLVKW*AGFRSF Trigger: AAATGACCTGAACCCTGCCCACCATTTAACCAAAAA...ATCACATAAGGCACTAAATGCCTCATGTTTTACTGACGGGAATTGAATTGTACA 38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000396776.6 |
||
| CDS-3UTR TCA 90 bp | GTCAAGCAATTCAGAGGAGCAAATAAAAGAGTGGATTTAGAGATGAGCTATCATTATATATCTTCATCTTaGGGAACTTCAGAAGGACGA | + |
|
Preference number: 4 (lower is better) Translates to: VKQFRGANKRVDLEMSYHYISSS*GTSEGR Trigger: TCGTCCTTCTGAAGTTCCTCAAGATGAAGATATATA...ATGATAGCTCATCTCTAAATCCACTCTTTTATTTGCTCCTCTGAATTGCTTGAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396776.6 |
||
| CDS-3UTR TCA 90 bp | GTAAGAGAAGTCACTGGAAAAGTGAATTGGAACCAATTGTGGAAAACCATAAATAAGTCACTGGAAAAGTaGATTGGAACCAATTGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: VREVTGKVNWNQLWKTINKSLEK*IGTNCG Trigger: TCCACAATTGGTTCCAATTCACTTTTCCAGTGACTT...ATTTATGGTTTTCCACAATTGGTTCCAATTCACTTTTCCAGTGACTTCTCTTAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000318469.2 ENST00000396776.6 |
||
| CDS-3UTR GCA 90 bp | TGTACAATTCAATTCCCGTCAGTAAAACATGAGGCATTTAGTGCCTTATGTGATTACAGACTTTTCTCCTaGTGCTTCTCCTTTGTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: CTIQFPSVKHEAFSALCDYRLFS*CFSFVK Trigger: TTTTACAAAGGAGAAGCAGCAGGAGAAAAGTCTGTA...ATCACATAAGGCACTAAATGCCTCATGTTTTACTGACGGGAATTGAATTGTACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000318469.2 ENST00000396776.6 |
||
| CDS-3UTR GCA 90 bp | TGTACAATTCAATTCCCGTCAGTAAAACATGAGGCATTTAGTGCCTTATGTGATGGGTATTATGTCTTTTaGAAAGAGGGGGCATTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: CTIQFPSVKHEAFSALCDGYYVF*KEGALK Trigger: TTTTAATGCCCCCTCTTTGCAAAAGACATAATACCC...ATCACATAAGGCACTAAATGCCTCATGTTTTACTGACGGGAATTGAATTGTACA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000318469.2 ENST00000396776.6 |
||
| CDS-3UTR CCA 90 bp | GTGGCAACATTCATATGTTTAAATGTCCTAAGAATTGAAGAGGCATCAAAGCTTGCAGATTTGTGGTCTTaGGTTTCAACTGAGATTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VATFICLNVLRIEEASKLADLWS*VSTEIS Trigger: TGAAATCTCAGTTGAAACCCAAGACCACAAATCTGC...AAGCTTTGATGCCTCTTCAATTCTTAGGACATTTAAACATATGAATGTTGCCAC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000318469.2 ENST00000396776.6 |
||
| CDS-3UTR CCA 90 bp | GTAAGAGAAGTCACTGGAAAAGTGAATTGGAACCAATTGTGGAAAACCATAAATTGTGACTTGGGGGTTTaGTGTACAGATTATTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: VREVTGKVNWNQLWKTINCDLGV*CTDYFI Trigger: GATGAAATAATCTGTACACCAAACCCCCAAGTCACA...ATTTATGGTTTTCCACAATTGGTTCCAATTCACTTTTCCAGTGACTTCTCTTAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000318469.2 ENST00000396776.6 |
||
| CDS-3UTR CCA 90 bp | TGTACAATTCAATTCCCGTCAGTAAAACATGAGGCATTTAGTGCCTTATGTGATAGTAAGAGAAGTCACTaGAAAAGTGAATTGGAACCA | + |
|
Preference number: 4 (lower is better) Translates to: CTIQFPSVKHEAFSALCDSKRSH*KSELEP Trigger: TGGTTCCAATTCACTTTTCCAGTGACTTCTCTTACT...ATCACATAAGGCACTAAATGCCTCATGTTTTACTGACGGGAATTGAATTGTACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000318469.2 ENST00000396776.6 |
||
| CDS-3UTR TCA 90 bp | GTAAGAGAAGTCACTGGAAAAGTGAATTGGAACCAATTGTGGAAAACCATAAATTATATATCTTCATCTTaGGGAACTTCAGAAGGACGA | + |
|
Preference number: 4 (lower is better) Translates to: VREVTGKVNWNQLWKTINYISSS*GTSEGR Trigger: TCGTCCTTCTGAAGTTCCTCAAGATGAAGATATATA...ATTTATGGTTTTCCACAATTGGTTCCAATTCACTTTTCCAGTGACTTCTCTTAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000318469.2 ENST00000396776.6 |
||
| CDS-3UTR GCA 90 bp | GTAAGAGAAGTCACTGGAAAAGTGAATTGGAACCAATTGTGGAAAACCATAAATTCCTCGAAATTAGACTaGCCTGTGTTTTCATATAGT | + |
|
Preference number: 4 (lower is better) Translates to: VREVTGKVNWNQLWKTINSSKLD*PVFSYS Trigger: ACTATATGAAAACACAGGGCAGTCTAATTTCGAGGA...ATTTATGGTTTTCCACAATTGGTTCCAATTCACTTTTCCAGTGACTTCTCTTAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000318469.2 ENST00000396776.6 |
||
| CDS-3UTR CCA 90 bp | GTAAGAGAAGTCACTGGAAAAGTGAATTGGAACCAATTGTGGAAAACCATAAATACTGGAAAAGTGAATTaGAACCAATTGTGGAAAACC | + |
|
Preference number: 4 (lower is better) Translates to: VREVTGKVNWNQLWKTINTGKVN*NQLWKT Trigger: GGTTTTCCACAATTGGTTCCAATTCACTTTTCCAGT...ATTTATGGTTTTCCACAATTGGTTCCAATTCACTTTTCCAGTGACTTCTCTTAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000318469.2 ENST00000396776.6 |
||
| CDS-3UTR CCA 90 bp | GTGGCAACATTCATATGTTTAAATGTCCTAAGAATTGAAGAGGCATCAAAGCTTGTTTTAAACCTGCATTaGGTTAGAACTTGTTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VATFICLNVLRIEEASKLVLNLH*VRTCSS Trigger: AGAGGAACAAGTTCTAACCCAATGCAGGTTTAAAAC...AAGCTTTGATGCCTCTTCAATTCTTAGGACATTTAAACATATGAATGTTGCCAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396776.6 |
||
| CDS-3UTR CAA 90 bp | TGGCTGTCAGAGTCTAAGGGAGGGTGCCACCTGGCTGGTGCTGGTGCTTCTGACCACCACTTCAGGAGGTaGAAGGAGAGTCTGGCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: WLSESKGGCHLAGAGASDHHFRR*KESLAV Trigger: GACAGCCAGACTCTCCTTCAACCTCCTGAAGTGGTG...GTCAGAAGCACCAGCACCAGCCAGGTGGCACCCTCCCTTAGACTCTGACAGCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396776.6 |
||
| CDS-3UTR CAA 90 bp | GCCCAGGTCAAGCAATTCAGAGGAGCAAATAAAAGAGTGGATTTAGAGATGAGCTGGCAAAAGAAATGTTaGCAGAGGCCCAGGTCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: AQVKQFRGANKRVDLEMSWQKKC*QRPRSS Trigger: GCTTGACCTGGGCCTCTGCAAACATTTCTTTTGCCA...GCTCATCTCTAAATCCACTCTTTTATTTGCTCCTCTGAATTGCTTGACCTGGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000396776.6 |
||
| CDS CCA 90 bp | AGAAGGTTGAATGATCTGCCATCCAGAAACCTGTTGGTTAAATGGTaGGCAGGGTTCAGGTCATTTCATCTGTATGTTCCCAGAGAATGG | + |
|
Preference number: 5 (lower is better) Translates to: RRLNDLPSRNLLVKW*AGFRSFHLYVPREW Trigger: CCATTCTCTGGGAACATACAGATGAAATGACCTGAACCCTGCCCACCATTTAACCAACAGGTTTCTGGATGGCAGATCATTCAACCTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000511930.2 |
||
| CDS-3UTR CAA 90 bp | GTCAAGCAATTCAGAGGAGCAAATAAAAGAGTGGATTTAGAGATGAGCTATCATGGTGCTTCTGACAGGTaGCAGAGAAGCTGGTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: VKQFRGANKRVDLEMSYHGASDR*QRSWSW Trigger: CCAGGACCAGCTTCTCTGCAACCTGTCAGAAGCACC...ATGATAGCTCATCTCTAAATCCACTCTTTTATTTGCTCCTCTGAATTGCTTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396776.6 |
||
| CDS TCA 90 bp | GACCTGCTTCCACATTTTCATAGTTGTCGTGTGTGTTATTTCCCCTaGCAGCAGATTTGTGGTCTTGGGTTTCAACTGAGATTTCATGCC | + |
|
Preference number: 5 (lower is better) Translates to: DLLPHFHSCRVCYFP*QQICGLGFQLRFHA Trigger: GGCATGAAATCTCAGTTGAAACCCAAGACCACAAATCTGCTGTCAGGGGAAATAACACACACGACAACTATGAAAATGTGGAAGCAGGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000318469.2 ENST00000396776.6 ENST00000502276.6 ENST00000511930.2 ENST00000513924.2 ENST00000515443.2 |
||
| CDS GCA 90 bp | AAAAACCTCGGTAAGGTAAATCGTGTGGCAACACGGTGTTTCCAGTaGCAAACACACCCAATTCCACAAACCACTAAGAGTAAAAGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: KNLGKVNRVATRCFQ*QTHPIPQTTKSKRS Trigger: GCTTCTTTTACTCTTAGTGGTTTGTGGAATTGGGTGTGTTTGGCACTGGAAACACCGTGTTGCCACACGATTTACCTTACCGAGGTTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000318469.2 ENST00000396776.6 ENST00000502276.6 ENST00000511930.2 ENST00000513924.2 ENST00000515443.2 |
||
| CDS-3UTR CAA 90 bp | GTCAAGCAATTCAGAGGAGCAAATAAAAGAGTGGATTTAGAGATGAGCTATCATAGGCCCCAGTGTCTGTaGTTCCTCTCCTTCTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: VKQFRGANKRVDLEMSYHRPQCL*FLSFSP Trigger: TGGAGAGAAGGAGAGGAACAACAGACACTGGGGCCT...ATGATAGCTCATCTCTAAATCCACTCTTTTATTTGCTCCTCTGAATTGCTTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000396776.6 |
||
| CDS CCA 90 bp | AAAAGAAGGTTGAATGATCTGCCATCCAGAAACCTGTTGGTTAAATaGTGGGCAGGGTTCAGGTCATTTCATCTGTATGTTCCCAGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: KRRLNDLPSRNLLVK*WAGFRSFHLYVPRE Trigger: TTCTCTGGGAACATACAGATGAAATGACCTGAACCCTGCCCACCATTTAACCAACAGGTTTCTGGATGGCAGATCATTCAACCTTCTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000511930.2 |
||
| CDS-3UTR CAA 90 bp | GCCCAGGTCAAGCAATTCAGAGGAGCAAATAAAAGAGTGGATTTAGAGATGAGCTTGGCTAAACAGGCATaGGCAGGATGGAAAAACAAA | + |
|
Preference number: 5 (lower is better) Translates to: AQVKQFRGANKRVDLEMSLAKQA*AGWKNK Trigger: TTTGTTTTTCCATCCTGCCAATGCCTGTTTAGCCAA...GCTCATCTCTAAATCCACTCTTTTATTTGCTCCTCTGAATTGCTTGACCTGGGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000396776.6 |
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| CDS-3UTR CAA 90 bp | TGTACAATTCAATTCCCGTCAGTAAAACATGAGGCATTTAGTGCCTTATGTGATCCCCTGACAGCAGATTaGTGGTCTTGGGTTTCAACT | + |
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Preference number: 5 (lower is better) Translates to: CTIQFPSVKHEAFSALCDPLTAD*WSWVST Trigger: AGTTGAAACCCAAGACCACAAATCTGCTGTCAGGGG...ATCACATAAGGCACTAAATGCCTCATGTTTTACTGACGGGAATTGAATTGTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000318469.2 ENST00000396776.6 |
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| CDS-3UTR CAA 90 bp | GTAAGAGAAGTCACTGGAAAAGTGAATTGGAACCAATTGTGGAAAACCATAAATCCCCTGACAGCAGATTaGTGGTCTTGGGTTTCAACT | + |
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Preference number: 5 (lower is better) Translates to: VREVTGKVNWNQLWKTINPLTAD*WSWVST Trigger: AGTTGAAACCCAAGACCACAAATCTGCTGTCAGGGG...ATTTATGGTTTTCCACAATTGGTTCCAATTCACTTTTCCAGTGACTTCTCTTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000318469.2 ENST00000396776.6 |
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| CDS-3UTR CAA 90 bp | GTCAAGCAATTCAGAGGAGCAAATAAAAGAGTGGATTTAGAGATGAGCTATCATCACAACACCTCAAGATaGGTGTGTCAAGCTCTCTCT | + |
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Preference number: 5 (lower is better) Translates to: VKQFRGANKRVDLEMSYHHNTSR*VCQALS Trigger: AGAGAGAGCTTGACACACCAATCTTGAGGTGTTGTG...ATGATAGCTCATCTCTAAATCCACTCTTTTATTTGCTCCTCTGAATTGCTTGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396776.6 |
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| CDS-3UTR CAA 90 bp | AGAGTGGATTTAGAGATGAGCTATCATAGCTTCATGAGCAGCATCGTATTCATTATTCCACTTCCTTTTTaGGTTAAATGGTGGGCAGGG | + |
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Preference number: 5 (lower is better) Translates to: RVDLEMSYHSFMSSIVFIIPLPF*VKWWAG Trigger: CCCTGCCCACCATTTAACCAAAAAAGGAAGTGGAAT...AATGAATACGATGCTGCTCATGAAGCTATGATAGCTCATCTCTAAATCCACTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000396776.6 |
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| CDS CCA 90 bp | CTGATGCAATTAGAGGAGAGAGTGTATAAACTTATTTCTGGAAGATaGCTCTCTTCGTGTGTGATGCTCTTCACATTACAGCCATTAATG | + |
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Preference number: 5 (lower is better) Translates to: LMQLEERVYKLISGR*LSSCVMLFTLQPLM Trigger: CATTAATGGCTGTAATGTGAAGAGCATCACACACGAAGAGAGCCATCTTCCAGAAATAAGTTTATACACTCTCTCCTCTAATTGCATCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000318469.2 ENST00000396776.6 ENST00000502276.6 ENST00000511930.2 ENST00000513924.2 ENST00000515443.2 |
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| CDS CCA 90 bp | GATAACCTAAATGAGAGAGAATTGTATTCTTACTTGGTTAAATGGTaGGCAGGGTTCAGGTCATTTCATCTGTATGTTCCCAGAGAATGG | + |
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Preference number: 5 (lower is better) Translates to: DNLNERELYSYLVKW*AGFRSFHLYVPREW Trigger: CCATTCTCTGGGAACATACAGATGAAATGACCTGAACCCTGCCCACCATTTAACCAAGTAAGAATACAATTCTCTCTCATTTAGGTTATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000515443.2 |
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| CDS CCA 90 bp | CGTGATAACCTAAATGAGAGAGAATTGTATTCTTACTTGGTTAAATaGTGGGCAGGGTTCAGGTCATTTCATCTGTATGTTCCCAGAGAA | + |
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Preference number: 5 (lower is better) Translates to: RDNLNERELYSYLVK*WAGFRSFHLYVPRE Trigger: TTCTCTGGGAACATACAGATGAAATGACCTGAACCCTGCCCACCATTTAACCAAGTAAGAATACAATTCTCTCTCATTTAGGTTATCACG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000515443.2 |
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| CDS-3UTR CAA 90 bp | TGTACAATTCAATTCCCGTCAGTAAAACATGAGGCATTTAGTGCCTTATGTGATGTAACTGTAACAATCTaGGCTGAGAGTTACCAGACC | + |
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Preference number: 5 (lower is better) Translates to: CTIQFPSVKHEAFSALCDVTVTI*AESYQT Trigger: GGTCTGGTAACTCTCAGCCAAGATTGTTACAGTTAC...ATCACATAAGGCACTAAATGCCTCATGTTTTACTGACGGGAATTGAATTGTACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396776.6 |
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| CDS CCA 90 bp | TTCCACAAACCACTAAGAGTAAAAGAAGCGAAATTCCTACAGAAATaGCCGCTAAATTATTTCCACAGCTTTTCGACATTTCTGTACAAA | + |
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Preference number: 5 (lower is better) Translates to: FHKPLRVKEAKFLQK*PLNYFHSFSTFLYK Trigger: TTTGTACAGAAATGTCGAAAAGCTGTGGAAATAATTTAGCGGCCATTTCTGTAGGAATTTCGCTTCTTTTACTCTTAGTGGTTTGTGGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000318469.2 ENST00000396776.6 ENST00000502276.6 ENST00000511930.2 ENST00000513924.2 ENST00000515443.2 |
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| CDS-3UTR CAA 90 bp | GTAAGAGAAGTCACTGGAAAAGTGAATTGGAACCAATTGTGGAAAACCATAAATGTATATATCTTCATCTaGAGGAACTTCAGAAGGACG | + |
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Preference number: 5 (lower is better) Translates to: VREVTGKVNWNQLWKTINVYIFI*RNFRRT Trigger: CGTCCTTCTGAAGTTCCTCAAGATGAAGATATATAC...ATTTATGGTTTTCCACAATTGGTTCCAATTCACTTTTCCAGTGACTTCTCTTAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000318469.2 ENST00000396776.6 |
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| CDS-3UTR CAA 90 bp | GTAAGAGAAGTCACTGGAAAAGTGAATTGGAACCAATTGTGGAAAACCATAAATGTGCTGTTTAGTGATTaGGTGTTACCCTTAATGAAT | + |
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Preference number: 5 (lower is better) Translates to: VREVTGKVNWNQLWKTINVLFSD*VLPLMN Trigger: ATTCATTAAGGGTAACACCAAATCACTAAACAGCAC...ATTTATGGTTTTCCACAATTGGTTCCAATTCACTTTTCCAGTGACTTCTCTTAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000318469.2 ENST00000396776.6 |
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| CDS-3UTR CAA 90 bp | GTGGCAACATTCATATGTTTAAATGTCCTAAGAATTGAAGAGGCATCAAAGCTTGTGCTGTTTAGTGATTaGGTGTTACCCTTAATGAAT | + |
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Preference number: 5 (lower is better) Translates to: VATFICLNVLRIEEASKLVLFSD*VLPLMN Trigger: ATTCATTAAGGGTAACACCAAATCACTAAACAGCAC...AAGCTTTGATGCCTCTTCAATTCTTAGGACATTTAAACATATGAATGTTGCCAC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000318469.2 ENST00000396776.6 |
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| CDS GCA 72 bp | GCAGATTTGTGGTCTTGGGTTTCAACTGAGATTTCATaGCTTAAGCCAATGATGCGGGGGCCCAAGAATGTT | + |
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Preference number: 6 (lower is better) Translates to: ADLWSWVSTEIS*LKPMMRGPKNV Trigger: AACATTCTTGGGCCCCCGCATCATTGGCTTAAGGCATGAAATCTCAGTTGAAACCCAAGACCACAAATCTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000318469.2 ENST00000396776.6 ENST00000502276.6 ENST00000511930.2 ENST00000513924.2 ENST00000515443.2 |
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| CDS CCA 72 bp | GGGTTCAGGTCATTTCATCTGTATGTTCCCAGAGAATaGCACAACACCTCAAGATTGGTGTGTCAAGCTCTC | + |
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Preference number: 6 (lower is better) Translates to: GFRSFHLYVPRE*HNTSRLVCQAL Trigger: GAGAGCTTGACACACCAATCTTGAGGTGTTGTGCCATTCTCTGGGAACATACAGATGAAATGACCTGAACCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000396776.6 ENST00000511930.2 ENST00000515443.2 |
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| CDS CCA 72 bp | AATGATCTGCCATCCAGAAACCTGTTGGTTAAATGGTaGGCAGGGTTCAGGTCATTTCATCTGTATGTTCCC | + |
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Preference number: 6 (lower is better) Translates to: NDLPSRNLLVKW*AGFRSFHLYVP Trigger: GGGAACATACAGATGAAATGACCTGAACCCTGCCCACCATTTAACCAACAGGTTTCTGGATGGCAGATCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000511930.2 |
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| CDS TCA 72 bp | CCACATTTTCATAGTTGTCGTGTGTGTTATTTCCCCTaGCAGCAGATTTGTGGTCTTGGGTTTCAACTGAGA | + |
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Preference number: 6 (lower is better) Translates to: PHFHSCRVCYFP*QQICGLGFQLR Trigger: TCTCAGTTGAAACCCAAGACCACAAATCTGCTGTCAGGGGAAATAACACACACGACAACTATGAAAATGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000318469.2 ENST00000396776.6 ENST00000502276.6 ENST00000511930.2 ENST00000513924.2 ENST00000515443.2 |
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| CDS CCA 72 bp | TTGAATGATCTGCCATCCAGAAACCTGTTGGTTAAATaGTGGGCAGGGTTCAGGTCATTTCATCTGTATGTT | + |
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Preference number: 6 (lower is better) Translates to: LNDLPSRNLLVK*WAGFRSFHLYV Trigger: AACATACAGATGAAATGACCTGAACCCTGCCCACCATTTAACCAACAGGTTTCTGGATGGCAGATCATTCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000511930.2 |
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| CDS CAA 72 bp | CGTGATAACCTAAATGAGAGAGAATTGTATTCTTACTaGGTTAAATGGTGGGCAGGGTTCAGGTCATTTCAT | + |
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Preference number: 6 (lower is better) Translates to: RDNLNERELYSY*VKWWAGFRSFH Trigger: ATGAAATGACCTGAACCCTGCCCACCATTTAACCAAGTAAGAATACAATTCTCTCTCATTTAGGTTATCACG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000515443.2 |
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| CDS CCA 72 bp | CCACTAAGAGTAAAAGAAGCGAAATTCCTACAGAAATaGCCGCTAAATTATTTCCACAGCTTTTCGACATTT | + |
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Preference number: 6 (lower is better) Translates to: PLRVKEAKFLQK*PLNYFHSFSTF Trigger: AAATGTCGAAAAGCTGTGGAAATAATTTAGCGGCCATTTCTGTAGGAATTTCGCTTCTTTTACTCTTAGTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000318469.2 ENST00000396776.6 ENST00000502276.6 ENST00000511930.2 ENST00000513924.2 ENST00000515443.2 |
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| CDS CCA 72 bp | CTAAATGAGAGAGAATTGTATTCTTACTTGGTTAAATaGTGGGCAGGGTTCAGGTCATTTCATCTGTATGTT | + |
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Preference number: 6 (lower is better) Translates to: LNERELYSYLVK*WAGFRSFHLYV Trigger: AACATACAGATGAAATGACCTGAACCCTGCCCACCATTTAACCAAGTAAGAATACAATTCTCTCTCATTTAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000515443.2 |
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