Pregenerated sensors for GAPLINC (Homo sapiens)
Ensembl gene IDs: ENSG00000266835Ensembl transcript IDs: ENST00000578664.2, ENST00000579007.5, ENST00000581029.5, ENST00000581442.5
Found 34 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | TGCCTGAGTCCAGCTTCTCCTTTTGCAGAGAGATTTGATAGCCCCTaGATGTGGATGCAGGGCTTCACACCTGATGCCTGGGATGATCAT | + |
|
Preference number: 5 (lower is better) Translates to: CLSPASPFAERFDSP*MWMQGFTPDAWDDH Trigger: ATGATCATCCCAGGCATCAGGTGTGAAGCCCTGCATCCACATCCAGGGGCTATCAAATCTCTCTGCAAAAGGAGAAGCTGGACTCAGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000579007.5 ENST00000581442.5 |
||
| CDS CCA 90 bp | AGCCTGAGTCCAGCTTCTCCTTTTGCAGAGAGATTTGATAGCCCCTaGATGTGGATGCAGGGCTTCACACCTGATGCCTGGGATGATCAT | + |
|
Preference number: 5 (lower is better) Translates to: SLSPASPFAERFDSP*MWMQGFTPDAWDDH Trigger: ATGATCATCCCAGGCATCAGGTGTGAAGCCCTGCATCCACATCCAGGGGCTATCAAATCTCTCTGCAAAAGGAGAAGCTGGACTCAGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000581029.5 |
||
| CDS GCA 90 bp | CAGCTTCTCCTTTTGCAGAGAGATTTGATAGCCCCTGGATGTGGATaGAGGGCTTCACACCTGATGCCTGGGATGATCATCCATAACGCA | + |
|
Preference number: 5 (lower is better) Translates to: QLLLLQRDLIAPGCG*RASHLMPGMIIHNA Trigger: TGCGTTATGGATGATCATCCCAGGCATCAGGTGTGAAGCCCTGCATCCACATCCAGGGGCTATCAAATCTCTCTGCAAAAGGAGAAGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000578664.2 ENST00000579007.5 ENST00000581029.5 ENST00000581442.5 |
||
| CDS CCA 90 bp | GAACTGAGTCCAGCTTCTCCTTTTGCAGAGAGATTTGATAGCCCCTaGATGTGGATGCAGGGCTTCACACCTGATGCCTGGGATGATCAT | + |
|
Preference number: 5 (lower is better) Translates to: ELSPASPFAERFDSP*MWMQGFTPDAWDDH Trigger: ATGATCATCCCAGGCATCAGGTGTGAAGCCCTGCATCCACATCCAGGGGCTATCAAATCTCTCTGCAAAAGGAGAAGCTGGACTCAGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000578664.2 |
||
| CDS TCA 90 bp | GCAGCTTCCTTCACAGAACTGCATACACATCACTGTAAACGTGCCTaGGTCCAGCTTCTCCTTTTGCAGAGAGATTTGATAGCCCCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: AASFTELHTHHCKRA*VQLLLLQRDLIAPG Trigger: TCCAGGGGCTATCAAATCTCTCTGCAAAAGGAGAAGCTGGACTCAGGCACGTTTACAGTGATGTGTATGCAGTTCTGTGAAGGAAGCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000579007.5 |
||
| CDS TCA 90 bp | TCCACATCTGTGCATACCCTGCATACACATCACTGTAAACGTGCCTaGGTCCAGCTTCTCCTTTTGCAGAGAGATTTGATAGCCCCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: STSVHTLHTHHCKRA*VQLLLLQRDLIAPG Trigger: TCCAGGGGCTATCAAATCTCTCTGCAAAAGGAGAAGCTGGACTCAGGCACGTTTACAGTGATGTGTATGCAGGGTATGCACAGATGTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000581442.5 |
||
| CDS GCA 90 bp | GTTTCCACATCTGTGCATACCCTTAGCAAGATCTTCTGGATGACTTaGTGCAGCTTCCCCATCAGCACTTGCTGCTTCACCTTGCACTTT | + |
|
Preference number: 5 (lower is better) Translates to: VSTSVHTLSKIFWMT*CSFPISTCCFTLHF Trigger: AAAGTGCAAGGTGAAGCAGCAAGTGCTGATGGGGAAGCTGCAGCAAGTCATCCAGAAGATCTTGCTAAGGGTATGCACAGATGTGGAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000578664.2 ENST00000579007.5 |
||
| CDS GCA 90 bp | TCCACATCTGTGCATACCCTTAGCAAGATCTTCTGGATGACTTGCTaGAGCTTCCCCATCAGCACTTGCTGCTTCACCTTGCACTTTTAT | + |
|
Preference number: 5 (lower is better) Translates to: STSVHTLSKIFWMTC*SFPISTCCFTLHFY Trigger: ATAAAAGTGCAAGGTGAAGCAGCAAGTGCTGATGGGGAAGCTGCAGCAAGTCATCCAGAAGATCTTGCTAAGGGTATGCACAGATGTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000578664.2 ENST00000579007.5 |
||
| CDS GCA 90 bp | AGCAAGATCTTCTGGATGACTTGCTGCAGCTTCCCCATCAGCACTTaGTGCTTCACCTTGCACTTTTATGTTATGGAGATGGCTTCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: SKIFWMTCCSFPIST*CFTLHFYVMEMASF Trigger: GAAAGAAGCCATCTCCATAACATAAAAGTGCAAGGTGAAGCAGCAAGTGCTGATGGGGAAGCTGCAGCAAGTCATCCAGAAGATCTTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000578664.2 ENST00000579007.5 |
||
| CDS GCA 90 bp | AAGATCTTCTGGATGACTTGCTGCAGCTTCCCCATCAGCACTTGCTaGTTCACCTTGCACTTTTATGTTATGGAGATGGCTTCTTTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: KIFWMTCCSFPISTC*FTLHFYVMEMASFL Trigger: AAGGAAAGAAGCCATCTCCATAACATAAAAGTGCAAGGTGAAGCAGCAAGTGCTGATGGGGAAGCTGCAGCAAGTCATCCAGAAGATCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000578664.2 ENST00000579007.5 |
||
| CDS GCA 90 bp | CAGGCTGCTGTGTGTGAACGCAGAGAAGCTTCAAAACAGATTTCTTaGCTTGGAGGAGTTCATTATTTCAGGCATTGGCTAGTCATAAGA | + |
|
Preference number: 5 (lower is better) Translates to: QAAVCERREASKQIS*LGGVHYFRHWLVIR Trigger: TCTTATGACTAGCCAATGCCTGAAATAATGAACTCCTCCAAGGCAAGAAATCTGTTTTGAAGCTTCTCTGCGTTCACACACAGCAGCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000581029.5 ENST00000581442.5 |
||
| CDS CCA 90 bp | TCAGGTATGGAATTATCTGGACATTTATGGCACAATCAGGGCTCTTaGACTCCATTCATTATCTCTACCCTCTTCCAAGTATTTGGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: SGMELSGHLWHNQGS*TPFIISTLFQVFGF Trigger: GAAACCAAATACTTGGAAGAGGGTAGAGATAATGAATGGAGTCCAAGAGCCCTGATTGTGCCATAAATGTCCAGATAATTCCATACCTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000578664.2 ENST00000579007.5 ENST00000581442.5 |
||
| CDS CCA 90 bp | TCAAAACAGATTTCTTGCCTTGGAGGAGTTCATTATTTCAGGCATTaGCTAGTCATAAGACTTAGGAAACCAAGAGGATGTGTCAGATCC | + |
|
Preference number: 5 (lower is better) Translates to: SKQISCLGGVHYFRH*LVIRLRKPRGCVRS Trigger: GGATCTGACACATCCTCTTGGTTTCCTAAGTCTTATGACTAGCCAATGCCTGAAATAATGAACTCCTCCAAGGCAAGAAATCTGTTTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000581029.5 ENST00000581442.5 |
||
| CDS CCA 90 bp | AGTGCCAAGTTTACAAACCACATAATCCTCAGGTATGGAATTATCTaGACATTTATGGCACAATCAGGGCTCTTGGACTCCATTCATTAT | + |
|
Preference number: 5 (lower is better) Translates to: SAKFTNHIILRYGII*TFMAQSGLLDSIHY Trigger: ATAATGAATGGAGTCCAAGAGCCCTGATTGTGCCATAAATGTCCAGATAATTCCATACCTGAGGATTATGTGGTTTGTAAACTTGGCACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000578664.2 ENST00000579007.5 |
||
| CDS CCA 72 bp | CCAGCTTCTCCTTTTGCAGAGAGATTTGATAGCCCCTaGATGTGGATGCAGGGCTTCACACCTGATGCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: PASPFAERFDSP*MWMQGFTPDAW Trigger: CCAGGCATCAGGTGTGAAGCCCTGCATCCACATCCAGGGGCTATCAAATCTCTCTGCAAAAGGAGAAGCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000578664.2 ENST00000579007.5 ENST00000581029.5 ENST00000581442.5 |
||
| CDS TCA 72 bp | CCACATCTGTGCATACCCTTAGCAAGATCTTCTGGATaGCTTGCTGCAGCTTCCCCATCAGCACTTGCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: PHLCIPLARSSG*LAAASPSALAA Trigger: AGCAGCAAGTGCTGATGGGGAAGCTGCAGCAAGTCATCCAGAAGATCTTGCTAAGGGTATGCACAGATGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000578664.2 ENST00000579007.5 |
||
| CDS GCA 72 bp | CTTTTGCAGAGAGATTTGATAGCCCCTGGATGTGGATaGAGGGCTTCACACCTGATGCCTGGGATGATCATC | + |
|
Preference number: 6 (lower is better) Translates to: LLQRDLIAPGCG*RASHLMPGMII Trigger: GATGATCATCCCAGGCATCAGGTGTGAAGCCCTGCATCCACATCCAGGGGCTATCAAATCTCTCTGCAAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000578664.2 ENST00000579007.5 ENST00000581029.5 ENST00000581442.5 |
||
| CDS GCA 72 bp | GTGCATACCCTTAGCAAGATCTTCTGGATGACTTGCTaGAGCTTCCCCATCAGCACTTGCTGCTTCACCTTG | + |
|
Preference number: 6 (lower is better) Translates to: VHTLSKIFWMTC*SFPISTCCFTL Trigger: CAAGGTGAAGCAGCAAGTGCTGATGGGGAAGCTGCAGCAAGTCATCCAGAAGATCTTGCTAAGGGTATGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000578664.2 ENST00000579007.5 |
||
| CDS CCA 72 bp | TCTCCTTTTGCAGAGAGATTTGATAGCCCCTGGATGTaGATGCAGGGCTTCACACCTGATGCCTGGGATGAT | + |
|
Preference number: 6 (lower is better) Translates to: SPFAERFDSPWM*MQGFTPDAWDD Trigger: ATCATCCCAGGCATCAGGTGTGAAGCCCTGCATCCACATCCAGGGGCTATCAAATCTCTCTGCAAAAGGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000578664.2 ENST00000579007.5 ENST00000581029.5 ENST00000581442.5 |
||
| CDS TCA 72 bp | TGCATTGAGCCGAGATCGCATCCCTGCATTCCAGCCTaGGTCCAGCTTCTCCTTTTGCAGAGAGATTTGATA | + |
|
Preference number: 6 (lower is better) Translates to: CIEPRSHPCIPA*VQLLLLQRDLI Trigger: TATCAAATCTCTCTGCAAAAGGAGAAGCTGGACTCAGGCTGGAATGCAGGGATGCGATCTCGGCTCAATGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000581029.5 |
||
| CDS CCA 72 bp | GTTTCCACATCTGTGCATACCCTTAGCAAGATCTTCTaGATGACTTGCTGCAGCTTCCCCATCAGCACTTGC | + |
|
Preference number: 6 (lower is better) Translates to: VSTSVHTLSKIF*MTCCSFPISTC Trigger: GCAAGTGCTGATGGGGAAGCTGCAGCAAGTCATCCAGAAGATCTTGCTAAGGGTATGCACAGATGTGGAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000578664.2 ENST00000579007.5 |
||
| CDS GCA 72 bp | TGGATGACTTGCTGCAGCTTCCCCATCAGCACTTGCTaGTTCACCTTGCACTTTTATGTTATGGAGATGGCT | + |
|
Preference number: 6 (lower is better) Translates to: WMTCCSFPISTC*FTLHFYVMEMA Trigger: AGCCATCTCCATAACATAAAAGTGCAAGGTGAAGCAGCAAGTGCTGATGGGGAAGCTGCAGCAAGTCATCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000578664.2 ENST00000579007.5 |
||
| CDS CAA 72 bp | CTTCTGGATGACTTGCTGCAGCTTCCCCATCAGCACTaGCTGCTTCACCTTGCACTTTTATGTTATGGAGAT | + |
|
Preference number: 6 (lower is better) Translates to: LLDDLLQLPHQH*LLHLALLCYGD Trigger: ATCTCCATAACATAAAAGTGCAAGGTGAAGCAGCAAGTGCTGATGGGGAAGCTGCAGCAAGTCATCCAGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000578664.2 ENST00000579007.5 |
||
| CDS TCA 72 bp | GTGCATACCCTGCATACACATCACTGTAAACGTGCCTaGGTCCAGCTTCTCCTTTTGCAGAGAGATTTGATA | + |
|
Preference number: 6 (lower is better) Translates to: VHTLHTHHCKRA*VQLLLLQRDLI Trigger: TATCAAATCTCTCTGCAAAAGGAGAAGCTGGACTCAGGCACGTTTACAGTGATGTGTATGCAGGGTATGCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000581442.5 |
||
| CDS CCA 72 bp | GGCTCTACTAAAACTACAAAAATTAGTCAGGCGTGGTaGCAGGTGCCTGTAATCCCAGATACTCAAGAAGCT | + |
|
Preference number: 6 (lower is better) Translates to: GSTKTTKISQAW*QVPVIPDTQEA Trigger: AGCTTCTTGAGTATCTGGGATTACAGGCACCTGCCACCACGCCTGACTAATTTTTGTAGTTTTAGTAGAGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000581029.5 |
||
| CDS CCA 72 bp | CTTGCTGCTTCACCTTGCACTTTTATGTTATGGAGATaGCTTCTTTCCTTAAACCTCTGGATCAAGCTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: LAASPCTFMLWR*LLSLNLWIKLC Trigger: GCAGAGCTTGATCCAGAGGTTTAAGGAAAGAAGCCATCTCCATAACATAAAAGTGCAAGGTGAAGCAGCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000578664.2 ENST00000579007.5 |
||
| CDS TCA 72 bp | TTCACAGAACTGCATACACATCACTGTAAACGTGCCTaGGTCCAGCTTCTCCTTTTGCAGAGAGATTTGATA | + |
|
Preference number: 6 (lower is better) Translates to: FTELHTHHCKRA*VQLLLLQRDLI Trigger: TATCAAATCTCTCTGCAAAAGGAGAAGCTGGACTCAGGCACGTTTACAGTGATGTGTATGCAGTTCTGTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000579007.5 |
||
| CDS GCA 72 bp | GTGTGTGAACGCAGAGAAGCTTCAAAACAGATTTCTTaGCTTGGAGGAGTTCATTATTTCAGGCATTGGCTA | + |
|
Preference number: 6 (lower is better) Translates to: VCERREASKQIS*LGGVHYFRHWL Trigger: TAGCCAATGCCTGAAATAATGAACTCCTCCAAGGCAAGAAATCTGTTTTGAAGCTTCTCTGCGTTCACACAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000578664.2 ENST00000581029.5 ENST00000581442.5 |
||
| CDS CAA 72 bp | GGAATTATCTGGACATTTATGGCACAATCAGGGCTCTaGGACTCCATTCATTATCTCTACCCTCTTCCAAGT | + |
|
Preference number: 6 (lower is better) Translates to: GIIWTFMAQSGL*DSIHYLYPLPS Trigger: ACTTGGAAGAGGGTAGAGATAATGAATGGAGTCCAAGAGCCCTGATTGTGCCATAAATGTCCAGATAATTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000578664.2 ENST00000579007.5 ENST00000581442.5 |
||
| CDS CCA 72 bp | GAATTATCTGGACATTTATGGCACAATCAGGGCTCTTaGACTCCATTCATTATCTCTACCCTCTTCCAAGTA | + |
|
Preference number: 6 (lower is better) Translates to: ELSGHLWHNQGS*TPFIISTLFQV Trigger: TACTTGGAAGAGGGTAGAGATAATGAATGGAGTCCAAGAGCCCTGATTGTGCCATAAATGTCCAGATAATTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000578664.2 ENST00000579007.5 ENST00000581442.5 |
||
| CDS CCA 72 bp | TTTACAAACCACATAATCCTCAGGTATGGAATTATCTaGACATTTATGGCACAATCAGGGCTCTTGGACTCC | + |
|
Preference number: 6 (lower is better) Translates to: FTNHIILRYGII*TFMAQSGLLDS Trigger: GGAGTCCAAGAGCCCTGATTGTGCCATAAATGTCCAGATAATTCCATACCTGAGGATTATGTGGTTTGTAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000578664.2 ENST00000579007.5 |
||
| CDS CAA 90 bp | CTCAGGTATGGAATTATCTGGACATTTATGGCACAATCAGGGCTCTaGGACTCCATTCATTATCTCTACCCTCTTCCAAGTATTTGGTTT | + |
|
Preference number: 6 (lower is better) Translates to: LRYGIIWTFMAQSGL*DSIHYLYPLPSIWF Trigger: AAACCAAATACTTGGAAGAGGGTAGAGATAATGAATGGAGTCCAAGAGCCCTGATTGTGCCATAAATGTCCAGATAATTCCATACCTGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000578664.2 ENST00000579007.5 ENST00000581442.5 |
||
| CDS CCA 72 bp | AAGTGCCAAGTTTACAAACCACATAATCCTCAGGTATaGAATTATCTGGACATTTATGGCACAATCAGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: KCQVYKPHNPQV*NYLDIYGTIRA Trigger: AGCCCTGATTGTGCCATAAATGTCCAGATAATTCCATACCTGAGGATTATGTGGTTTGTAAACTTGGCACTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000578664.2 ENST00000579007.5 |
||
| CDS CCA 72 bp | ATTTCTTGCCTTGGAGGAGTTCATTATTTCAGGCATTaGCTAGTCATAAGACTTAGGAAACCAAGAGGATGT | + |
|
Preference number: 6 (lower is better) Translates to: ISCLGGVHYFRH*LVIRLRKPRGC Trigger: ACATCCTCTTGGTTTCCTAAGTCTTATGACTAGCCAATGCCTGAAATAATGAACTCCTCCAAGGCAAGAAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000581029.5 ENST00000581442.5 |
||