Pregenerated sensors for GAPDH (Homo sapiens)
Ensembl gene IDs: ENSG00000111640Ensembl transcript IDs: ENST00000396861.5, ENST00000466525.1, ENST00000466588.5, ENST00000474249.5, ENST00000492719.5, ENST00000496049.1
Found 18 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CTAGGGGAAGGAGGCTCCGGGCAGATGGCGCCGCAAGGGCGGAGCTaGACAGGGCGCCACAGCCTGGGTGCGGGGCTCCGCCAGGTCCGA | + |
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Preference number: 5 (lower is better) Translates to: LGEGGSGQMAPQGRS*TGRHSLGAGLRQVR Trigger: TCGGACCTGGCGGAGCCCCGCACCCAGGCTGTGGCGCCCTGTGCAGCTCCGCCCTTGCGGCGCCATCTGCCCGGAGCCTCCTTCCCCTAG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000496049.1 |
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| CDS GCA 90 bp | GATGGCGCCGCAAGGGCGGAGCTGCACAGGGCGCCACAGCCTGGGTaGGGGGCTCCGCCAGGTCCGAGCGCTGACCTTGAGCTCTCCTTG | + |
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Preference number: 5 (lower is better) Translates to: DGAARAELHRAPQPG*GAPPGPSADLELSL Trigger: CAAGGAGAGCTCAAGGTCAGCGCTCGGACCTGGCGGAGCCCCGCACCCAGGCTGTGGCGCCCTGTGCAGCTCCGCCCTTGCGGCGCCATC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000496049.1 |
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| CDS CCA 90 bp | GGGTCCGGGTCGGGATCTCGGGCGGGAGTAGGGACCTCCTGTTTCTaGGGACTAGGGGAAGGAGGCTCCGGGCAGATGGCGCCGCAAGGG | + |
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Preference number: 5 (lower is better) Translates to: GSGSGSRAGVGTSCF*GLGEGGSGQMAPQG Trigger: CCCTTGCGGCGCCATCTGCCCGGAGCCTCCTTCCCCTAGTCCCCAGAAACAGGAGGTCCCTACTCCCGCCCGAGATCCCGACCCGGACCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000496049.1 |
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| CDS GCA 90 bp | CTTGAGCTCTCCTTGCGGGGAACAGCTACCCTGCCCCCATACGACTaGAAAGACCCGGAGCCCGCAAGGCTCGTAGACGCGGTTCGGGGG | + |
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Preference number: 5 (lower is better) Translates to: LELSLRGTATLPPYD*KDPEPARLVDAVRG Trigger: CCCCCGAACCGCGTCTACGAGCCTTGCGGGCTCCGGGTCTTTGCAGTCGTATGGGGGCAGGGTAGCTGTTCCCCGCAAGGAGAGCTCAAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000492719.5 ENST00000496049.1 |
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| CDS GCA 90 bp | GGACACAAGGTTACCATATACCCAAGGGAGCCACACCATCCTAGTTaGCTCCCCAAAGCACATTTCTTCCATTCTGTCTTCCACTCACTC | + |
|
Preference number: 5 (lower is better) Translates to: GHKVTIYPREPHHPS*LPKAHFFHSVFHSL Trigger: GAGTGAGTGGAAGACAGAATGGAAGAAATGTGCTTTGGGGAGGCAACTAGGATGGTGTGGCTCCCTTGGGTATATGGTAACCTTGTGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000466525.1 ENST00000466588.5 ENST00000474249.5 |
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| CDS GCA 72 bp | GTGGCTCGGCCCGCAGCGGCGCGAACACATCCGGCCTaGGCCCGCCCCTGCCGCCTTCAGGCCGTCCCTAGC | + |
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Preference number: 6 (lower is better) Translates to: VARPAAARTHPA*ARPCRLQAVPS Trigger: GCTAGGGACGGCCTGAAGGCGGCAGGGGCGGGCGCAGGCCGGATGTGTTCGCGCCGCTGCGGGCCGAGCCAC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396861.5 |
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| CDS GCA 72 bp | GGAGGCTCCGGGCAGATGGCGCCGCAAGGGCGGAGCTaGACAGGGCGCCACAGCCTGGGTGCGGGGCTCCGC | + |
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Preference number: 6 (lower is better) Translates to: GGSGQMAPQGRS*TGRHSLGAGLR Trigger: GCGGAGCCCCGCACCCAGGCTGTGGCGCCCTGTGCAGCTCCGCCCTTGCGGCGCCATCTGCCCGGAGCCTCC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000496049.1 |
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| CDS GCA 72 bp | GCAGCGGCGCGAACACATCCGGCCTGCGCCCGCCCCTaGCGCCTTCAGGCCGTCCCTAGCCTCCCGGGTTTC | + |
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Preference number: 6 (lower is better) Translates to: AAARTHPACARP*RLQAVPSLPGF Trigger: GAAACCCGGGAGGCTAGGGACGGCCTGAAGGCGGCAGGGGCGGGCGCAGGCCGGATGTGTTCGCGCCGCTGC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396861.5 |
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| CDS GCA 72 bp | GCAAGGGCGGAGCTGCACAGGGCGCCACAGCCTGGGTaGGGGGCTCCGCCAGGTCCGAGCGCTGACCTTGAG | + |
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Preference number: 6 (lower is better) Translates to: ARAELHRAPQPG*GAPPGPSADLE Trigger: CTCAAGGTCAGCGCTCGGACCTGGCGGAGCCCCGCACCCAGGCTGTGGCGCCCTGTGCAGCTCCGCCCTTGC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000496049.1 |
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| CDS CAA 72 bp | CTGGGTGCGGGGCTCCGCCAGGTCCGAGCGCTGACCTaGAGCTCTCCTTGCGGGGAACAGCTACCCTGCCCC | + |
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Preference number: 6 (lower is better) Translates to: LGAGLRQVRALT*SSPCGEQLPCP Trigger: GGGGCAGGGTAGCTGTTCCCCGCAAGGAGAGCTCAAGGTCAGCGCTCGGACCTGGCGGAGCCCCGCACCCAG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000496049.1 |
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| CDS CCA 72 bp | TCGGGATCTCGGGCGGGAGTAGGGACCTCCTGTTTCTaGGGACTAGGGGAAGGAGGCTCCGGGCAGATGGCG | + |
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Preference number: 6 (lower is better) Translates to: SGSRAGVGTSCF*GLGEGGSGQMA Trigger: CGCCATCTGCCCGGAGCCTCCTTCCCCTAGTCCCCAGAAACAGGAGGTCCCTACTCCCGCCCGAGATCCCGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000496049.1 |
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| CDS CAA 72 bp | GCTCCGCCAGGTCCGAGCGCTGACCTTGAGCTCTCCTaGCGGGGAACAGCTACCCTGCCCCCATACGACTGC | + |
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Preference number: 6 (lower is better) Translates to: APPGPSADLELS*RGTATLPPYDC Trigger: GCAGTCGTATGGGGGCAGGGTAGCTGTTCCCCGCAAGGAGAGCTCAAGGTCAGCGCTCGGACCTGGCGGAGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000496049.1 |
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| CDS GCA 72 bp | TCCTTGCGGGGAACAGCTACCCTGCCCCCATACGACTaGAAAGACCCGGAGCCCGCAAGGCTCGTAGACGCG | + |
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Preference number: 6 (lower is better) Translates to: SLRGTATLPPYD*KDPEPARLVDA Trigger: CGCGTCTACGAGCCTTGCGGGCTCCGGGTCTTTGCAGTCGTATGGGGGCAGGGTAGCTGTTCCCCGCAAGGA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000492719.5 ENST00000496049.1 |
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| CDS GCA 72 bp | CTCCGCCAGGTCCGAGCGCTGACCTTGAGCTCTCCTTaGGGGGAACAGCTACCCTGCCCCCATACGACTGCA | + |
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Preference number: 6 (lower is better) Translates to: LRQVRALTLSSP*GEQLPCPHTTA Trigger: TGCAGTCGTATGGGGGCAGGGTAGCTGTTCCCCGCAAGGAGAGCTCAAGGTCAGCGCTCGGACCTGGCGGAG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000496049.1 |
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| CDS GCA 72 bp | AGAGAAGCAGACAGTTATGAACCCGGGTCCTGCCTTTaGAGGGCTGAGTCAGCTTCCCCTCCCGCGGGCCCT | + |
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Preference number: 6 (lower is better) Translates to: READSYEPGSCL*RAESASPPAGP Trigger: AGGGCCCGCGGGAGGGGAAGCTGACTCAGCCCTGCAAAGGCAGGACCCGGGTTCATAACTGTCTGCTTCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000466525.1 |
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| CDS GCA 72 bp | CTGACCTTGAGCTCTCCTTGCGGGGAACAGCTACCCTaGCCCCATACGACTGCAAAGACCCGGAGCCCGCAA | + |
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Preference number: 6 (lower is better) Translates to: LTLSSPCGEQLP*PHTTAKTRSPQ Trigger: TTGCGGGCTCCGGGTCTTTGCAGTCGTATGGGGGCAGGGTAGCTGTTCCCCGCAAGGAGAGCTCAAGGTCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000496049.1 |
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| CDS GCA 72 bp | CAAATCTTGAGCTCTCCTTGCGGGGAACAGCTACCCTaGCCCCATACGACTGCAAAGACCCGGAGCCCGCAA | + |
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Preference number: 6 (lower is better) Translates to: QILSSPCGEQLP*PHTTAKTRSPQ Trigger: TTGCGGGCTCCGGGTCTTTGCAGTCGTATGGGGGCAGGGTAGCTGTTCCCCGCAAGGAGAGCTCAAGATTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000492719.5 |
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| CDS GCA 72 bp | GTTACCATATACCCAAGGGAGCCACACCATCCTAGTTaGCTCCCCAAAGCACATTTCTTCCATTCTGTCTTC | + |
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Preference number: 6 (lower is better) Translates to: VTIYPREPHHPS*LPKAHFFHSVF Trigger: GAAGACAGAATGGAAGAAATGTGCTTTGGGGAGGCAACTAGGATGGTGTGGCTCCCTTGGGTATATGGTAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000466525.1 ENST00000466588.5 ENST00000474249.5 |
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