RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GANC (Homo sapiens)

Ensembl gene IDs: ENSG00000214013

Ensembl transcript IDs: ENST00000318010.12, ENST00000440615.6, ENST00000561871.1, ENST00000562170.5, ENST00000562859.5, ENST00000566442.5, ENST00000566690.1, ENST00000567421.1, ENST00000567596.5, ENST00000567784.5, ENST00000568687.5, ENST00000568953.1, ENST00000570013.5

Found 546 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GAGGCTGCTGTCCACTTGGACACTGGCCTTGAGCAACTCAGCTGCTaGAGCCAGAGCGCCAATGCTGCATGGCCTGAGGCAAGCCCTGGC +
Preference number: 1 (lower is better)
Translates to: EAAVHLDTGLEQLSC*SQSANAAWPEASPG
Trigger: GCCAGGGCTTGCCTCAGGCCATGCAGCATTGGCGCTCTGGCTGCAGCAGCTGAGTTGCTCAAGGCCAGTGTCCAAGTGGACAGCAGCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
3UTR CCA 90 bp GGCCTTGAGCAACTCAGCTGCTGCAGCCAGAGCGCCAATGCTGCATaGCCTGAGGCAAGCCCTGGCAAATGGGCTGCCCAGGTAGGCTTG +
Preference number: 1 (lower is better)
Translates to: GLEQLSCCSQSANAA*PEASPGKWAAQVGL
Trigger: CAAGCCTACCTGGGCAGCCCATTTGCCAGGGCTTGCCTCAGGCCATGCAGCATTGGCGCTCTGGCTGCAGCAGCTGAGTTGCTCAAGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
3UTR GCA 90 bp CCAGAGGCTGCTGTCCACTTGGACACTGGCCTTGAGCAACTCAGCTaGTGCAGCCAGAGCGCCAATGCTGCATGGCCTGAGGCAAGCCCT +
Preference number: 1 (lower is better)
Translates to: PEAAVHLDTGLEQLS*CSQSANAAWPEASP
Trigger: AGGGCTTGCCTCAGGCCATGCAGCATTGGCGCTCTGGCTGCAGCAGCTGAGTTGCTCAAGGCCAGTGTCCAAGTGGACAGCAGCCTCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
3UTR CCA 90 bp AGCCAGAGCGCCAATGCTGCATGGCCTGAGGCAAGCCCTGGCAAATaGGCTGCCCAGGTAGGCTTGGCCCACGTTAAAACAGACCCACGC +
Preference number: 1 (lower is better)
Translates to: SQSANAAWPEASPGK*AAQVGLAHVKTDPR
Trigger: GCGTGGGTCTGTTTTAACGTGGGCCAAGCCTACCTGGGCAGCCCATTTGCCAGGGCTTGCCTCAGGCCATGCAGCATTGGCGCTCTGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
3UTR GCA 90 bp CCAAGTCGATCTCTAGGGGAGAATAACTCCCACGGCTGCAGCGTATaGAGTGCACACAGAAGAGGGCTGCTCTGCCCAGTCCATGTGGGT +
Preference number: 1 (lower is better)
Translates to: PSRSLGENNSHGCSV*SAHRRGLLCPVHVG
Trigger: ACCCACATGGACTGGGCAGAGCAGCCCTCTTCTGTGTGCACTGCATACGCTGCAGCCGTGGGAGTTATTCTCCCCTAGAGATCGACTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
3UTR GCA 90 bp CTGTCCAGGTGTGCTTCTGATTGTCTGGCCAGTTCCCAAATTAGCTaGCTGTTCCTGGCCATTTCTGCAGACACAGTACTGGCTAATAAG +
Preference number: 1 (lower is better)
Translates to: LSRCASDCLASSQIS*LFLAISADTVLANK
Trigger: CTTATTAGCCAGTACTGTGTCTGCAGAAATGGCCAGGAACAGGCAGCTAATTTGGGAACTGGCCAGACAATCAGAAGCACACCTGGACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570013.5
3UTR CCA 90 bp CCCAAATTAGCTGCCTGTTCCTGGCCATTTCTGCAGACACAGTACTaGCTAATAAGCGGTAGTTGTGCCTTATCTGCTGAGAAGGTGGCT +
Preference number: 1 (lower is better)
Translates to: PKLAACSWPFLQTQY*LISGSCALSAEKVA
Trigger: AGCCACCTTCTCAGCAGATAAGGCACAACTACCGCTTATTAGCCAGTACTGTGTCTGCAGAAATGGCCAGGAACAGGCAGCTAATTTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570013.5
3UTR GCA 90 bp GGTCCAAACTCAAGGTTTATTCAATGGCACAGCTGTGGAAACCAATaGTATCAGGGAGAAGTCCAACTCGAGCCCATGAACAAAGGGCAG +
Preference number: 1 (lower is better)
Translates to: GPNSRFIQWHSCGNQ*YQGEVQLEPMNKGQ
Trigger: CTGCCCTTTGTTCATGGGCTCGAGTTGGACTTCTCCCTGATAGCATTGGTTTCCACAGCTGTGCCATTGAATAAACCTTGAGTTTGGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
3UTR CCA 90 bp GTGCTTCTGATTGTCTGGCCAGTTCCCAAATTAGCTGCCTGTTCCTaGCCATTTCTGCAGACACAGTACTGGCTAATAAGCGGTAGTTGT +
Preference number: 1 (lower is better)
Translates to: VLLIVWPVPKLAACS*PFLQTQYWLISGSC
Trigger: ACAACTACCGCTTATTAGCCAGTACTGTGTCTGCAGAAATGGCCAGGAACAGGCAGCTAATTTGGGAACTGGCCAGACAATCAGAAGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570013.5
3UTR GCA 90 bp TTTCACCCACGGTCATGTAATATCTGTGGCTGGAATGGTTTCTGCTaGACAGCATTGCCAACTAATGGCTCTGTCTTTTCCACCAAGAAG +
Preference number: 1 (lower is better)
Translates to: FHPRSCNICGWNGFC*TALPTNGSVFSTKK
Trigger: CTTCTTGGTGGAAAAGACAGAGCCATTAGTTGGCAATGCTGTGCAGCAGAAACCATTCCAGCCACAGATATTACATGACCGTGGGTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
3UTR GCA 90 bp ATATTTCACCCACGGTCATGTAATATCTGTGGCTGGAATGGTTTCTaGTGCACAGCATTGCCAACTAATGGCTCTGTCTTTTCCACCAAG +
Preference number: 1 (lower is better)
Translates to: IFHPRSCNICGWNGF*CTALPTNGSVFSTK
Trigger: CTTGGTGGAAAAGACAGAGCCATTAGTTGGCAATGCTGTGCAGCAGAAACCATTCCAGCCACAGATATTACATGACCGTGGGTGAAATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
3UTR GCA 90 bp GGTCATGTAATATCTGTGGCTGGAATGGTTTCTGCTGCACAGCATTaGCAACTAATGGCTCTGTCTTTTCCACCAAGAAGCATTTCTTTG +
Preference number: 1 (lower is better)
Translates to: GHVISVAGMVSAAQH*QLMALSFPPRSISL
Trigger: CAAAGAAATGCTTCTTGGTGGAAAAGACAGAGCCATTAGTTGGCAATGCTGTGCAGCAGAAACCATTCCAGCCACAGATATTACATGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
3UTR CCA 90 bp GAAGACTGTCACAGATGTGACATGGCTACCTCCTCAAACCATATTTaGGGGCACATGATATTGATAGGTTTTATTACAGGTGATGTCAAC +
Preference number: 1 (lower is better)
Translates to: EDCHRCDMATSSNHI*GHMILIGFITGDVN
Trigger: GTTGACATCACCTGTAATAAAACCTATCAATATCATGTGCCCCCAAATATGGTTTGAGGAGGTAGCCATGTCACATCTGTGACAGTCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318010.12
3UTR TCA 90 bp TGTGAGCTTACATATGGTGCAGAGCTCAAATCTCAACTCATACTATaGAATGTGTCCACAAGGAAATGCACAATGTTGATTGCCTTTGGG +
Preference number: 1 (lower is better)
Translates to: CELTYGAELKSQLIL*NVSTRKCTMLIAFG
Trigger: CCCAAAGGCAATCAACATTGTGCATTTCCTTGTGGACACATTTCATAGTATGAGTTGAGATTTGAGCTCTGCACCATATGTAAGCTCACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
3UTR TCA 90 bp GCAAAACTTACAGAAATAGGAGCAAAGAATCTGTGCAGGTCTCTGTaGGCTTACATATGGTGCAGAGCTCAAATCTCAACTCATACTATG +
Preference number: 1 (lower is better)
Translates to: AKLTEIGAKNLCRSL*AYIWCRAQISTHTM
Trigger: CATAGTATGAGTTGAGATTTGAGCTCTGCACCATATGTAAGCTCACAGAGACCTGCACAGATTCTTTGCTCCTATTTCTGTAAGTTTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
3UTR CAA 90 bp GCATGGCCTGAGGCAAGCCCTGGCAAATGGGCTGCCCAGGTAGGCTaGGCCCACGTTAAAACAGACCCACGCAGCCCTGCTGAAGGAATG +
Preference number: 2 (lower is better)
Translates to: AWPEASPGKWAAQVG*AHVKTDPRSPAEGM
Trigger: CATTCCTTCAGCAGGGCTGCGTGGGTCTGTTTTAACGTGGGCCAAGCCTACCTGGGCAGCCCATTTGCCAGGGCTTGCCTCAGGCCATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
3UTR-3UTR GCA 90 bp GGAGCCACTGAGGTCTGTGGAGCCTTGGGCACCATGACACGACTGGTATGTTGTGGGCAGGCAGGTCCCTaGTCACATCACCAGGGGCAG +
Preference number: 2 (lower is better)
Translates to: GATEVCGALGTMTRLVCCGQAGP*SHHQGQ
Trigger: CTGCCCCTGGTGATGTGAGCAGGGACCTGCCTGCCC...ACAACATACCAGTCGTGTCATGGTGCCCAAGGCTCCACAGACCTCAGTGGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
3UTR-3UTR CCA 90 bp CGATCTCTAGGGGAGAATAACTCCCACGGCTGCAGCGTATGCAGTGCACACAGAGCAAGCCCTGGCAAATaGGCTGCCCAGGTAGGCTTG +
Preference number: 2 (lower is better)
Translates to: RSLGENNSHGCSVCSAHRASPGK*AAQVGL
Trigger: CAAGCCTACCTGGGCAGCCCATTTGCCAGGGCTTGC...TCTGTGTGCACTGCATACGCTGCAGCCGTGGGAGTTATTCTCCCCTAGAGATCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
3UTR-3UTR TCA 90 bp ATCTCGGTTACTCAGGATGCTGAGGCAGAAGAATCGCTTGAACCCGGAAAGCAGCTTGGACACTGGCCTTaGGCAACTCAGCTGCTGCAG +
Preference number: 2 (lower is better)
Translates to: ISVTQDAEAEESLEPGKQLGHWP*ATQLLQ
Trigger: CTGCAGCAGCTGAGTTGCTCAAGGCCAGTGTCCAAG...CTGCTTTCCGGGTTCAAGCGATTCTTCTGCCTCAGCATCCTGAGTAACCGAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
3UTR-3UTR TCA 90 bp ATCTCGGTTACTCAGGATGCTGAGGCAGAAGAATCGCTTGAACCCGGAAAGCAGCCCACGCAGCCCTGCTaGAGGAATGGAAGCAATAGA +
Preference number: 2 (lower is better)
Translates to: ISVTQDAEAEESLEPGKQPTQPC*RNGSNR
Trigger: TCTATTGCTTCCATTCCTTCAGCAGGGCTGCGTGGG...CTGCTTTCCGGGTTCAAGCGATTCTTCTGCCTCAGCATCCTGAGTAACCGAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
3UTR-3UTR TCA 90 bp ATCTCGGTTACTCAGGATGCTGAGGCAGAAGAATCGCTTGAACCCGGAAAGCAGAGAAGAGGTGTGTGCTaGGGAGTGCTGAGGAGTCGA +
Preference number: 2 (lower is better)
Translates to: ISVTQDAEAEESLEPGKQRRGVC*GVLRSR
Trigger: TCGACTCCTCAGCACTCCTCAGCACACACCTCTTCT...CTGCTTTCCGGGTTCAAGCGATTCTTCTGCCTCAGCATCCTGAGTAACCGAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
3UTR-3UTR GCA 90 bp ATCTCGGTTACTCAGGATGCTGAGGCAGAAGAATCGCTTGAACCCGGAAAGCAGATCCCTTACATTTTGTaGCCAAGGCCAGGGTCTCCC +
Preference number: 2 (lower is better)
Translates to: ISVTQDAEAEESLEPGKQIPYIL*PRPGSP
Trigger: GGGAGACCCTGGCCTTGGGCACAAAATGTAAGGGAT...CTGCTTTCCGGGTTCAAGCGATTCTTCTGCCTCAGCATCCTGAGTAACCGAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
3UTR-3UTR TCA 90 bp AGAATGCTAGCTATATGGCCTCCATTGTCAGTGGCTAATATGATAGCCTGTTTCGGTGAGGGGAAAGGTTaGAAGGGGCAGGCAGGTCCC +
Preference number: 2 (lower is better)
Translates to: RMLAIWPPLSVANMIACFGEGKG*KGQAGP
Trigger: GGGACCTGCCTGCCCCTTTCAACCTTTCCCCTCACC...GAAACAGGCTATCATATTAGCCACTGACAATGGAGGCCATATAGCTAGCATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318010.12
3UTR-3UTR GCA 90 bp TACCTCTCATTCATTAAGTGCCTACTGGGAGCTAGCCACTTCACAGAGACCTTTGAGCAACTCAGCTGCTaGAGCCAGAGCGCCAATGCT +
Preference number: 2 (lower is better)
Translates to: YLSFIKCLLGASHFTETFEQLSC*SQSANA
Trigger: AGCATTGGCGCTCTGGCTGCAGCAGCTGAGTTGCTC...AAAGGTCTCTGTGAAGTGGCTAGCTCCCAGTAGGCACTTAATGAATGAGAGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
3UTR-3UTR GCA 90 bp AGCCCCATGTTGCTCTCTGGTACACAAATTCAGAAATGGGAGGTAGGTAAAGTGCACGGCTGCAGCGTATaGAGTGCACACAGAAGAGGG +
Preference number: 2 (lower is better)
Translates to: SPMLLSGTQIQKWEVGKVHGCSV*SAHRRG
Trigger: CCCTCTTCTGTGTGCACTGCATACGCTGCAGCCGTG...CACTTTACCTACCTCCCATTTCTGAATTTGTGTACCAGAGAGCAACATGGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
3UTR-3UTR TCA 90 bp ATATCTGTGGCTGGAATGGTTTCTGCTGCACAGCATTGCCAACTAATGGCTCTGGAGCCTTGGGCACCATaGCACGACTGGTATGTTGTA +
Preference number: 2 (lower is better)
Translates to: ISVAGMVSAAQHCQLMALEPWAP*HDWYVV
Trigger: TACAACATACCAGTCGTGTCATGGTGCCCAAGGCTC...CAGAGCCATTAGTTGGCAATGCTGTGCAGCAGAAACCATTCCAGCCACAGATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
3UTR-3UTR TCA 90 bp TACCTCTCATTCATTAAGTGCCTACTGGGAGCTAGCCACTTCACAGAGACCTTTTGTGCTGAGGAGTGCTaGGGAGTCGAGGCTGCTAAA +
Preference number: 2 (lower is better)
Translates to: YLSFIKCLLGASHFTETFCAEEC*GVEAAK
Trigger: TTTAGCAGCCTCGACTCCTCAGCACTCCTCAGCACA...AAAGGTCTCTGTGAAGTGGCTAGCTCCCAGTAGGCACTTAATGAATGAGAGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
3UTR-3UTR TCA 90 bp CCTGTAGGCCAACTCAGCCCCATGTTGCTCTCTGGTACACAAATTCAGAAATGGCTGTGCAGGTCTCTGTaGGCTTACATATGGTGCAGA +
Preference number: 2 (lower is better)
Translates to: PVGQLSPMLLSGTQIQKWLCRSL*AYIWCR
Trigger: TCTGCACCATATGTAAGCTCACAGAGACCTGCACAG...CCATTTCTGAATTTGTGTACCAGAGAGCAACATGGGGCTGAGTTGGCCTACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
3UTR-3UTR GCA 90 bp GGCTGGTTGGGCAAAGCTTCATTTTCATTAGGCTTAGATGAAGAGGCAAGGGGTCATCCTCGGAGAAGCTaGTGGAAGTGTTGTCTCTGG +
Preference number: 2 (lower is better)
Translates to: GWLGKASFSLGLDEEARGHPRRS*WKCCLW
Trigger: CCAGAGACAACACTTCCAGCAGCTTCTCCGAGGATG...ACCCCTTGCCTCTTCATCTAAGCCTAATGAAAATGAAGCTTTGCCCAACCAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570013.5
3UTR-3UTR CCA 90 bp CCCTTCGAGGGTTTGGTAGGTGGAAATCCTAGGAATCTCATTACTAAGGCTTTCAGGCTGCTGTCCACTTaGACACTGGCCTTGAGCAAC +
Preference number: 2 (lower is better)
Translates to: PFEGLVGGNPRNLITKAFRLLST*TLALSN
Trigger: GTTGCTCAAGGCCAGTGTCCAAGTGGACAGCAGCCT...GAAAGCCTTAGTAATGAGATTCCTAGGATTTCCACCTACCAAACCCTCGAAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
3UTR-3UTR TCA 90 bp CCCTTCGAGGGTTTGGTAGGTGGAAATCCTAGGAATCTCATTACTAAGGCTTTCGGCAGGAGGATTGTTTaGGTCCGGGAGTTCAAGACT +
Preference number: 2 (lower is better)
Translates to: PFEGLVGGNPRNLITKAFGRRIV*VREFKT
Trigger: AGTCTTGAACTCCCGGACTCAAACAATCCTCCTGCC...GAAAGCCTTAGTAATGAGATTCCTAGGATTTCCACCTACCAAACCCTCGAAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
3UTR-3UTR GCA 90 bp AGGCTGTCTCCACTTGTCTCTAGCCAAATGTTTCAATATAGATTTGGGTCAAAACCCTGGCAAATGGGCTaGCCAGGTAGGCTTGGCCCA +
Preference number: 2 (lower is better)
Translates to: RLSPLVSSQMFQYRFGSKPWQMG*PGRLGP
Trigger: TGGGCCAAGCCTACCTGGGCAGCCCATTTGCCAGGG...TTTTGACCCAAATCTATATTGAAACATTTGGCTAGAGACAAGTGGAGACAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
3UTR-3UTR GCA 90 bp TACCTCTCATTCATTAAGTGCCTACTGGGAGCTAGCCACTTCACAGAGACCTTTAATAACTCCCACGGCTaGAGCGTATGCAGTGCACAC +
Preference number: 2 (lower is better)
Translates to: YLSFIKCLLGASHFTETFNNSHG*SVCSAH
Trigger: GTGTGCACTGCATACGCTGCAGCCGTGGGAGTTATT...AAAGGTCTCTGTGAAGTGGCTAGCTCCCAGTAGGCACTTAATGAATGAGAGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
3UTR-3UTR CCA 90 bp TTCAACTCCCAGTGTTTATGTGCTTTGACTGTGTTTCTGCTGCTTATCATTTTGAGCGCCAATGCTGCATaGCCTGAGGCAAGCCCTGGC +
Preference number: 2 (lower is better)
Translates to: FNSQCLCALTVFLLLIILSANAA*PEASPG
Trigger: GCCAGGGCTTGCCTCAGGCCATGCAGCATTGGCGCT...CAAAATGATAAGCAGCAGAAACACAGTCAAAGCACATAAACACTGGGAGTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
3UTR-3UTR CCA 90 bp AGAATGCTAGCTATATGGCCTCCATTGTCAGTGGCTAATATGATAGCCTGTTTCAGGGCAGGAGGATATTaGCGCCCAGGGATCAGAAGG +
Preference number: 2 (lower is better)
Translates to: RMLAIWPPLSVANMIACFRAGGY*RPGIRR
Trigger: CCTTCTGATCCCTGGGCGCCAATATCCTCCTGCCCT...GAAACAGGCTATCATATTAGCCACTGACAATGGAGGCCATATAGCTAGCATTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
3UTR-3UTR CCA 90 bp AGAATGCTAGCTATATGGCCTCCATTGTCAGTGGCTAATATGATAGCCTGTTTCTCTGCCCAGTCCATGTaGGTGGAAGATAACTGGGGG +
Preference number: 2 (lower is better)
Translates to: RMLAIWPPLSVANMIACFSAQSM*VEDNWG
Trigger: CCCCCAGTTATCTTCCACCCACATGGACTGGGCAGA...GAAACAGGCTATCATATTAGCCACTGACAATGGAGGCCATATAGCTAGCATTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
3UTR-3UTR CCA 90 bp ATATCTGTGGCTGGAATGGTTTCTGCTGCACAGCATTGCCAACTAATGGCTCTGGAGCACAGTTATAAGTaGGACAGCATTACGGGGAAG +
Preference number: 2 (lower is better)
Translates to: ISVAGMVSAAQHCQLMALEHSYK*DSITGK
Trigger: CTTCCCCGTAATGCTGTCCCACTTATAACTGTGCTC...CAGAGCCATTAGTTGGCAATGCTGTGCAGCAGAAACCATTCCAGCCACAGATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
3UTR-3UTR TCA 90 bp ATCTCGGTTACTCAGGATGCTGAGGCAGAAGAATCGCTTGAACCCGGAAAGCAGAACAGAACATGCTCTTaGGGGACATACAATCTAGTA +
Preference number: 2 (lower is better)
Translates to: ISVTQDAEAEESLEPGKQNRTCS*GTYNLV
Trigger: TACTAGATTGTATGTCCCTCAAGAGCATGTTCTGTT...CTGCTTTCCGGGTTCAAGCGATTCTTCTGCCTCAGCATCCTGAGTAACCGAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
3UTR-3UTR GCA 90 bp AGGCTGTCTCCACTTGTCTCTAGCCAAATGTTTCAATATAGATTTGGGTCAAAAGGGAGTACCAGAGGCTaGTGTCCACTTGGACACTGG +
Preference number: 2 (lower is better)
Translates to: RLSPLVSSQMFQYRFGSKGSTRG*CPLGHW
Trigger: CCAGTGTCCAAGTGGACAGCAGCCTCTGGTACTCCC...TTTTGACCCAAATCTATATTGAAACATTTGGCTAGAGACAAGTGGAGACAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
3UTR-3UTR GCA 90 bp TTCAACTCCCAGTGTTTATGTGCTTTGACTGTGTTTCTGCTGCTTATCATTTTGCACACAGAAGAGGGCTaGTCTGCCCAGTCCATGTGG +
Preference number: 2 (lower is better)
Translates to: FNSQCLCALTVFLLLIILHTEEG*SAQSMW
Trigger: CCACATGGACTGGGCAGAGCAGCCCTCTTCTGTGTG...CAAAATGATAAGCAGCAGAAACACAGTCAAAGCACATAAACACTGGGAGTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
3UTR-3UTR GCA 90 bp ATATCTGTGGCTGGAATGGTTTCTGCTGCACAGCATTGCCAACTAATGGCTCTGATCCCATTCCAATGTTaGCAACTGTTCCAACAGAGG +
Preference number: 2 (lower is better)
Translates to: ISVAGMVSAAQHCQLMALIPFQC*QLFQQR
Trigger: CCTCTGTTGGAACAGTTGGCAACATTGGAATGGGAT...CAGAGCCATTAGTTGGCAATGCTGTGCAGCAGAAACCATTCCAGCCACAGATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
3UTR-3UTR TCA 90 bp ATCTCGGTTACTCAGGATGCTGAGGCAGAAGAATCGCTTGAACCCGGAAAGCAGACAGCTAACAGTTACTaGAAGTCAGGTATAATAGTG +
Preference number: 2 (lower is better)
Translates to: ISVTQDAEAEESLEPGKQTANSY*KSGIIV
Trigger: CACTATTATACCTGACTTTCAGTAACTGTTAGCTGT...CTGCTTTCCGGGTTCAAGCGATTCTTCTGCCTCAGCATCCTGAGTAACCGAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
3UTR-3UTR TCA 90 bp ATATCTGTGGCTGGAATGGTTTCTGCTGCACAGCATTGCCAACTAATGGCTCTGGGAAATGCACAATGTTaGTTGCCTTTGGGAAGAATC +
Preference number: 2 (lower is better)
Translates to: ISVAGMVSAAQHCQLMALGNAQC*LPLGRI
Trigger: GATTCTTCCCAAAGGCAATCAACATTGTGCATTTCC...CAGAGCCATTAGTTGGCAATGCTGTGCAGCAGAAACCATTCCAGCCACAGATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
3UTR-3UTR TCA 90 bp AGGTTGATCTTGCTTTTCCTGAGGCACCAGGACTCTTCACTGTTATGTAAAGAAAAAGACATAGAACAGTaGGTGGCCACCTCTACCAGC +
Preference number: 2 (lower is better)
Translates to: RLILLFLRHQDSSLLCKEKDIEQ*VATSTS
Trigger: GCTGGTAGAGGTGGCCACTCACTGTTCTATGTCTTT...TTCTTTACATAACAGTGAAGAGTCCTGGTGCCTCAGGAAAAGCAAGATCAACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000440615.6
3UTR-3UTR GCA 90 bp GTAGTTGTGCCTTATCTGCTGAGAAGGTGGCTGGTTGGGCAAAGCTTCATTTTCTCTCTGGTGAAACCTTaGAAACAGGCTTACTTGCTT +
Preference number: 2 (lower is better)
Translates to: VVVPYLLRRWLVGQSFIFSLVKP*KQAYLL
Trigger: AAGCAAGTAAGCCTGTTTGCAAGGTTTCACCAGAGA...GAAAATGAAGCTTTGCCCAACCAGCCACCTTCTCAGCAGATAAGGCACAACTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570013.5
3UTR-3UTR CCA 90 bp GGCTGGTTGGGCAAAGCTTCATTTTCATTAGGCTTAGATGAAGAGGCAAGGGGTATAATGCCTGATAGGTaGACTTCTTGGAAAGCCACT +
Preference number: 2 (lower is better)
Translates to: GWLGKASFSLGLDEEARGIMPDR*TSWKAT
Trigger: AGTGGCTTTCCAAGAAGTCCACCTATCAGGCATTAT...ACCCCTTGCCTCTTCATCTAAGCCTAATGAAAATGAAGCTTTGCCCAACCAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570013.5
3UTR CAA 90 bp CGGTCATGTAATATCTGTGGCTGGAATGGTTTCTGCTGCACAGCATaGCCAACTAATGGCTCTGTCTTTTCCACCAAGAAGCATTTCTTT +
Preference number: 2 (lower is better)
Translates to: RSCNICGWNGFCCTA*PTNGSVFSTKKHFF
Trigger: AAAGAAATGCTTCTTGGTGGAAAAGACAGAGCCATTAGTTGGCAATGCTGTGCAGCAGAAACCATTCCAGCCACAGATATTACATGACCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
3UTR-3UTR TCA 90 bp GGCTGGTTGGGCAAAGCTTCATTTTCATTAGGCTTAGATGAAGAGGCAAGGGGTTGTCTTCATCTGTTGTaGCTGAATCCAATAATGCCT +
Preference number: 2 (lower is better)
Translates to: GWLGKASFSLGLDEEARGCLHLL*LNPIMP
Trigger: AGGCATTATTGGATTCAGTCACAACAGATGAAGACA...ACCCCTTGCCTCTTCATCTAAGCCTAATGAAAATGAAGCTTTGCCCAACCAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570013.5
3UTR-3UTR CCA 90 bp GAGAGGAACCTTACTTGCTTCATTGATGATTTGGAACCTGGTGCTGTCTTCATCGATAGGTGGACTTCTTaGAAAGCCACTGTTTCTGAC +
Preference number: 2 (lower is better)
Translates to: ERNLTCFIDDLEPGAVFIDRWTS*KATVSD
Trigger: GTCAGAAACAGTGGCTTTCCAAGAAGTCCACCTATC...GATGAAGACAGCACCAGGTTCCAAATCATCAATGAAGCAAGTAAGGTTCCTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567784.5
3UTR CAA 90 bp AGTTGCAAAGATAGTGTCCTCCAGTCTCTGATCATTCCACAGTCTTaGTCTCTCATGACCGTGACACTTTTGAAGAGTACTTGTCAGGTT +
Preference number: 2 (lower is better)
Translates to: SCKDSVLQSLIIPQS*SLMTVTLLKSTCQV
Trigger: AACCTGACAAGTACTCTTCAAAAGTGTCACGGTCATGAGAGACAAAGACTGTGGAATGATCAGAGACTGGAGGACACTATCTTTGCAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
3UTR-3UTR GCA 90 bp ATATCTGTGGCTGGAATGGTTTCTGCTGCACAGCATTGCCAACTAATGGCTCTGATGCACAATGTTGATTaGCTTTGGGAAGAATCTTGT +
Preference number: 2 (lower is better)
Translates to: ISVAGMVSAAQHCQLMALMHNVD*LWEESC
Trigger: ACAAGATTCTTCCCAAAGGCAATCAACATTGTGCAT...CAGAGCCATTAGTTGGCAATGCTGTGCAGCAGAAACCATTCCAGCCACAGATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
3UTR-3UTR GCA 90 bp TACCTCTCATTCATTAAGTGCCTACTGGGAGCTAGCCACTTCACAGAGACCTTTGTGTCCACAAGGAAATaGACAATGTTGATTGCCTTT +
Preference number: 2 (lower is better)
Translates to: YLSFIKCLLGASHFTETFVSTRK*TMLIAF
Trigger: AAAGGCAATCAACATTGTGCATTTCCTTGTGGACAC...AAAGGTCTCTGTGAAGTGGCTAGCTCCCAGTAGGCACTTAATGAATGAGAGGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
3UTR-3UTR CCA 90 bp TTCAACTCCCAGTGTTTATGTGCTTTGACTGTGTTTCTGCTGCTTATCATTTTGGGCTTCATGGGAAAGTaGGATTTAAGTTGGGCCTGG +
Preference number: 2 (lower is better)
Translates to: FNSQCLCALTVFLLLIILGFMGK*DLSWAW
Trigger: CCAGGCCCAACTTAAATCCCACTTTCCCATGAAGCC...CAAAATGATAAGCAGCAGAAACACAGTCAAAGCACATAAACACTGGGAGTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
3UTR-3UTR CCA 90 bp CAAACAGGCTTACTTGCTTCATTGATGATTTGGAACCTGGTGCTGTCTTCATCTGATAGGTGGACTTCTTaGAAAGCCACTGTTTCTGAC +
Preference number: 2 (lower is better)
Translates to: QTGLLASLMIWNLVLSSSDRWTS*KATVSD
Trigger: GTCAGAAACAGTGGCTTTCCAAGAAGTCCACCTATC...AGATGAAGACAGCACCAGGTTCCAAATCATCAATGAAGCAAGTAAGCCTGTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570013.5
3UTR-3UTR TCA 90 bp CAAAGGGCAGATAATGAACACATAAACAACTGCACATTTCAATTCCCAGAAGCCGCCTGGCCAACATGGTaGAAACCTTTCTCTACTAAA +
Preference number: 2 (lower is better)
Translates to: QRADNEHINNCTFQFPEAAWPTW*KPFSTK
Trigger: TTTAGTAGAGAAAGGTTTTCACCATGTTGGCCAGGC...GGCTTCTGGGAATTGAAATGTGCAGTTGTTTATGTGTTCATTATCTGCCCTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
3UTR-3UTR GCA 90 bp ACAAGCTCAGATAGAAATCCCCACTATACGCACAAAGCTGGATTCAAATTATTCTGCTGGGTAGCTACGTaGTTCAGGTGCTTTAAAGAG +
Preference number: 2 (lower is better)
Translates to: TSSDRNPHYTHKAGFKLFCWVAT*FRCFKE
Trigger: CTCTTTAAAGCACCTGAAGCACGTAGCTACCCAGCA...GAATAATTTGAATCCAGCTTTGTGCGTATAGTGGGGATTTCTATCTGAGCTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566442.5
3UTR-3UTR CCA 90 bp AGAGGAACCTTACTTGCTTCATTGATGATTTGGAACCTGGTGCTGTCTTCATCTATAATGCCTGATAGGTaGACTTCTTGGAAAGCCACT +
Preference number: 2 (lower is better)
Translates to: RGTLLASLMIWNLVLSSSIMPDR*TSWKAT
Trigger: AGTGGCTTTCCAAGAAGTCCACCTATCAGGCATTAT...AGATGAAGACAGCACCAGGTTCCAAATCATCAATGAAGCAAGTAAGGTTCCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567784.5
3UTR CAA 90 bp TGTGACATGGCTACCTCCTCAAACCATATTTGGGGGCACATGATATaGATAGGTTTTATTACAGGTGATGTCAACTTTGATCACTTGCCT +
Preference number: 2 (lower is better)
Translates to: CDMATSSNHIWGHMI*IGFITGDVNFDHLP
Trigger: AGGCAAGTGATCAAAGTTGACATCACCTGTAATAAAACCTATCAATATCATGTGCCCCCAAATATGGTTTGAGGAGGTAGCCATGTCACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318010.12
3UTR-3UTR GCA 90 bp GACAAAGTGAAGGAATTCTGCACACAGACCAAACTCCAGAATTGTATTTTTCTTAACTCAGCCCCATGTTaGTCTCTGGTACACAAATTC +
Preference number: 2 (lower is better)
Translates to: DKVKEFCTQTKLQNCIFLNSAPC*SLVHKF
Trigger: GAATTTGTGTACCAGAGAGCAACATGGGGCTGAGTT...AAGAAAAATACAATTCTGGAGTTTGGTCTGTGTGCAGAATTCCTTCACTTTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318010.12
3UTR-3UTR CCA 90 bp TTCAACTCCCAGTGTTTATGTGCTTTGACTGTGTTTCTGCTGCTTATCATTTTGAGCCATATTAGAGCCTaGGACAAAAGGAAAACTCAG +
Preference number: 2 (lower is better)
Translates to: FNSQCLCALTVFLLLIILSHIRA*DKRKTQ
Trigger: CTGAGTTTTCCTTTTGTCCCAGGCTCTAATATGGCT...CAAAATGATAAGCAGCAGAAACACAGTCAAAGCACATAAACACTGGGAGTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000318010.12
3UTR-3UTR GCA 90 bp AGAATGCTAGCTATATGGCCTCCATTGTCAGTGGCTAATATGATAGCCTGTTTCTACTCTACTAGTTACTaGTCCATTCCTCCAATAATA +
Preference number: 2 (lower is better)
Translates to: RMLAIWPPLSVANMIACFYSTSY*SIPPII
Trigger: TATTATTGGAGGAATGGAGCAGTAACTAGTAGAGTA...GAAACAGGCTATCATATTAGCCACTGACAATGGAGGCCATATAGCTAGCATTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
3UTR-3UTR GCA 90 bp CAAAGGGCAGATAATGAACACATAAACAACTGCACATTTCAATTCCCAGAAGCCAGATCTGATATAAGATaGCAATGTCTCTGCTATTTC +
Preference number: 2 (lower is better)
Translates to: QRADNEHINNCTFQFPEARSDIR*QCLCYF
Trigger: GAAATAGCAGAGACATTGGCATCTTATATCAGATCT...GGCTTCTGGGAATTGAAATGTGCAGTTGTTTATGTGTTCATTATCTGCCCTTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
3UTR-3UTR TCA 90 bp GACAAAGTGAAGGAATTCTGCACACAGACCAAACTCCAGAATTGTATTTTTCTTGAAAACATTAAGGTATaGTCCCTGAGAATGCTAAGT +
Preference number: 2 (lower is better)
Translates to: DKVKEFCTQTKLQNCIFLENIKV*SLRMLS
Trigger: ACTTAGCATTCTCAGGGATCATACCTTAATGTTTTC...AAGAAAAATACAATTCTGGAGTTTGGTCTGTGTGCAGAATTCCTTCACTTTGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318010.12
3UTR CAA 90 bp ATGATATTGATAGGTTTTATTACAGGTGATGTCAACTTTGATCACTaGCCTAAAGTGATGTTTACTGGGTTTCTCCCTGGTAATGTTACT +
Preference number: 2 (lower is better)
Translates to: MILIGFITGDVNFDH*PKVMFTGFLPGNVT
Trigger: AGTAACATTACCAGGGAGAAACCCAGTAAACATCACTTTAGGCAAGTGATCAAAGTTGACATCACCTGTAATAAAACCTATCAATATCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
3UTR CAA 90 bp CATTGCCAACTAATGGCTCTGTCTTTTCCACCAAGAAGCATTTCTTaGATTACTAACACTATTGGAAGCAATGTCTTTGCTTATCATTAT +
Preference number: 2 (lower is better)
Translates to: HCQLMALSFPPRSIS*ITNTIGSNVFAYHY
Trigger: ATAATGATAAGCAAAGACATTGCTTCCAATAGTGTTAGTAATCAAAGAAATGCTTCTTGGTGGAAAAGACAGAGCCATTAGTTGGCAATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
3UTR CCA 72 bp CAACTCAGCTGCTGCAGCCAGAGCGCCAATGCTGCATaGCCTGAGGCAAGCCCTGGCAAATGGGCTGCCCAG +
Preference number: 3 (lower is better)
Translates to: QLSCCSQSANAA*PEASPGKWAAQ
Trigger: CTGGGCAGCCCATTTGCCAGGGCTTGCCTCAGGCCATGCAGCATTGGCGCTCTGGCTGCAGCAGCTGAGTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
3UTR CCA 72 bp GTTGGGCCTGGAAGGATGGTAAGGGCAGGAGGATATTaGCGCCCAGGGATCAGAAGGCACAGAGGTGGCCGT +
Preference number: 3 (lower is better)
Translates to: VGPGRMVRAGGY*RPGIRRHRGGR
Trigger: ACGGCCACCTCTGTGCCTTCTGATCCCTGGGCGCCAATATCCTCCTGCCCTTACCATCCTTCCAGGCCCAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
3UTR CCA 72 bp GCCAATGCTGCATGGCCTGAGGCAAGCCCTGGCAAATaGGCTGCCCAGGTAGGCTTGGCCCACGTTAAAACA +
Preference number: 3 (lower is better)
Translates to: ANAAWPEASPGK*AAQVGLAHVKT
Trigger: TGTTTTAACGTGGGCCAAGCCTACCTGGGCAGCCCATTTGCCAGGGCTTGCCTCAGGCCATGCAGCATTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
3UTR-3UTR CAA 90 bp GGAGCCACTGAGGTCTGTGGAGCCTTGGGCACCATGACACGACTGGTATGTTGTGCTGCCCAGGTAGGCTaGGCCCACGTTAAAACAGAC +
Preference number: 3 (lower is better)
Translates to: GATEVCGALGTMTRLVCCAAQVG*AHVKTD
Trigger: GTCTGTTTTAACGTGGGCCAAGCCTACCTGGGCAGC...ACAACATACCAGTCGTGTCATGGTGCCCAAGGCTCCACAGACCTCAGTGGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
3UTR GCA 72 bp ACGGCTGCAGCGTATGCAGTGCACACAGAAGAGGGCTaGTCTGCCCAGTCCATGTGGGTGGAAGATAACTGG +
Preference number: 3 (lower is better)
Translates to: TAAAYAVHTEEG*SAQSMWVEDNW
Trigger: CCAGTTATCTTCCACCCACATGGACTGGGCAGAGCAGCCCTCTTCTGTGTGCACTGCATACGCTGCAGCCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
3UTR GCA 72 bp TCTCTAGGGGAGAATAACTCCCACGGCTGCAGCGTATaGAGTGCACACAGAAGAGGGCTGCTCTGCCCAGTC +
Preference number: 3 (lower is better)
Translates to: SLGENNSHGCSV*SAHRRGLLCPV
Trigger: GACTGGGCAGAGCAGCCCTCTTCTGTGTGCACTGCATACGCTGCAGCCGTGGGAGTTATTCTCCCCTAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
3UTR GCA 72 bp CCAAGTCGATCTCTAGGGGAGAATAACTCCCACGGCTaGAGCGTATGCAGTGCACACAGAAGAGGGCTGCTC +
Preference number: 3 (lower is better)
Translates to: PSRSLGENNSHG*SVCSAHRRGLL
Trigger: GAGCAGCCCTCTTCTGTGTGCACTGCATACGCTGCAGCCGTGGGAGTTATTCTCCCCTAGAGATCGACTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
3UTR TCA 72 bp AGGGAGCCACTGAGGTCTGTGGAGCCTTGGGCACCATaGCACGACTGGTATGTTGTAATGTTCTGCCCCATG +
Preference number: 3 (lower is better)
Translates to: REPLRSVEPWAP*HDWYVVMFCPM
Trigger: CATGGGGCAGAACATTACAACATACCAGTCGTGTCATGGTGCCCAAGGCTCCACAGACCTCAGTGGCTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
3UTR CCA 72 bp GGACAACTGGCCTGTCCAGGTGTGCTTCTGATTGTCTaGCCAGTTCCCAAATTAGCTGCCTGTTCCTGGCCA +
Preference number: 3 (lower is better)
Translates to: GQLACPGVLLIV*PVPKLAACSWP
Trigger: TGGCCAGGAACAGGCAGCTAATTTGGGAACTGGCCAGACAATCAGAAGCACACCTGGACAGGCCAGTTGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570013.5
3UTR-3UTR CAA 90 bp ATCTCGGTTACTCAGGATGCTGAGGCAGAAGAATCGCTTGAACCCGGAAAGCAGACTTGGACACTGGCCTaGAGCAACTCAGCTGCTGCA +
Preference number: 3 (lower is better)
Translates to: ISVTQDAEAEESLEPGKQTWTLA*SNSAAA
Trigger: TGCAGCAGCTGAGTTGCTCAAGGCCAGTGTCCAAGT...CTGCTTTCCGGGTTCAAGCGATTCTTCTGCCTCAGCATCCTGAGTAACCGAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
3UTR-3UTR CAA 90 bp AGCCCCATGTTGCTCTCTGGTACACAAATTCAGAAATGGGAGGTAGGTAAAGTGAAGGGCAGGAGGATATaGGCGCCCAGGGATCAGAAG +
Preference number: 3 (lower is better)
Translates to: SPMLLSGTQIQKWEVGKVKGRRI*APRDQK
Trigger: CTTCTGATCCCTGGGCGCCAATATCCTCCTGCCCTT...CACTTTACCTACCTCCCATTTCTGAATTTGTGTACCAGAGAGCAACATGGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
3UTR CCA 72 bp GCTGCCTGTTCCTGGCCATTTCTGCAGACACAGTACTaGCTAATAAGCGGTAGTTGTGCCTTATCTGCTGAG +
Preference number: 3 (lower is better)
Translates to: AACSWPFLQTQY*LISGSCALSAE
Trigger: CTCAGCAGATAAGGCACAACTACCGCTTATTAGCCAGTACTGTGTCTGCAGAAATGGCCAGGAACAGGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570013.5
3UTR-3UTR CAA 90 bp GCAAGGGGTAACTTCACAGAGGTGCTCAGAGATATTCCTGCATCCTCGGAGAAGGTCTCTGGTGAAACCTaGCAAACAGGCTTACTTGCT +
Preference number: 3 (lower is better)
Translates to: ARGNFTEVLRDIPASSEKVSGET*QTGLLA
Trigger: AGCAAGTAAGCCTGTTTGCAAGGTTTCACCAGAGAC...CTTCTCCGAGGATGCAGGAATATCTCTGAGCACCTCTGTGAAGTTACCCCTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570013.5
3UTR GCA 72 bp TGTGCTTCTGATTGTCTGGCCAGTTCCCAAATTAGCTaGCTGTTCCTGGCCATTTCTGCAGACACAGTACTG +
Preference number: 3 (lower is better)
Translates to: CASDCLASSQIS*LFLAISADTVL
Trigger: CAGTACTGTGTCTGCAGAAATGGCCAGGAACAGGCAGCTAATTTGGGAACTGGCCAGACAATCAGAAGCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570013.5
3UTR CCA 72 bp ATTGTCTGGCCAGTTCCCAAATTAGCTGCCTGTTCCTaGCCATTTCTGCAGACACAGTACTGGCTAATAAGC +
Preference number: 3 (lower is better)
Translates to: IVWPVPKLAACS*PFLQTQYWLIS
Trigger: GCTTATTAGCCAGTACTGTGTCTGCAGAAATGGCCAGGAACAGGCAGCTAATTTGGGAACTGGCCAGACAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570013.5
3UTR-3UTR CAA 90 bp TGGTGCAGAGCTCAAATCTCAACTCATACTATGAAATGTGTCCACAAGGAAATGGAGGCTGCTGTCCACTaGGACACTGGCCTTGAGCAA +
Preference number: 3 (lower is better)
Translates to: WCRAQISTHTMKCVHKEMEAAVH*DTGLEQ
Trigger: TTGCTCAAGGCCAGTGTCCAAGTGGACAGCAGCCTC...CATTTCCTTGTGGACACATTTCATAGTATGAGTTGAGATTTGAGCTCTGCACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
3UTR-3UTR CAA 90 bp TACCTCTCATTCATTAAGTGCCTACTGGGAGCTAGCCACTTCACAGAGACCTTTCCAGGCTGTCTCCACTaGTCTCTAGCCAAATGTTTC +
Preference number: 3 (lower is better)
Translates to: YLSFIKCLLGASHFTETFPGCLH*SLAKCF
Trigger: GAAACATTTGGCTAGAGACAAGTGGAGACAGCCTGG...AAAGGTCTCTGTGAAGTGGCTAGCTCCCAGTAGGCACTTAATGAATGAGAGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
3UTR-3UTR CAA 90 bp GACAAAGTGAAGGAATTCTGCACACAGACCAAACTCCAGAATTGTATTTTTCTTGAGGTCTGTGGAGCCTaGGGCACCATGACACGACTG +
Preference number: 3 (lower is better)
Translates to: DKVKEFCTQTKLQNCIFLEVCGA*GTMTRL
Trigger: CAGTCGTGTCATGGTGCCCAAGGCTCCACAGACCTC...AAGAAAAATACAATTCTGGAGTTTGGTCTGTGTGCAGAATTCCTTCACTTTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318010.12
3UTR-3UTR CAA 90 bp TATCTGCTGAGAAGGTGGCTGGTTGGGCAAAGCTTCATTTTCATTAGGCTTAGAAAGCTGCTGGAAGTGTaGTCTCTGGTGAAACCTTGC +
Preference number: 3 (lower is better)
Translates to: YLLRRWLVGQSFIFIRLRKLLEV*SLVKPC
Trigger: GCAAGGTTTCACCAGAGACAACACTTCCAGCAGCTT...TCTAAGCCTAATGAAAATGAAGCTTTGCCCAACCAGCCACCTTCTCAGCAGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570013.5
3UTR TCA 72 bp GTGGCTAATATGATAGCCTGTTTCCAGTGGAGCTGCTaGTGGCTTTCTACCCACTGGCCTGAGAAGTTATTT +
Preference number: 3 (lower is better)
Translates to: VANMIACFQWSC*WLSTHWPEKLF
Trigger: AAATAACTTCTCAGGCCAGTGGGTAGAAAGCCATCAGCAGCTCCACTGGAAACAGGCTATCATATTAGCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
3UTR TCA 72 bp CATCCTCGGAGAAGCTGCTGGAAGTGTTGTCTCTGGTaGAACCTTGCAAACAGGCTTACTTGCTTCATTGAT +
Preference number: 3 (lower is better)
Translates to: HPRRSCWKCCLW*NLANRLTCFID
Trigger: ATCAATGAAGCAAGTAAGCCTGTTTGCAAGGTTTCACCAGAGACAACACTTCCAGCAGCTTCTCCGAGGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570013.5
3UTR GCA 72 bp CGGTCATGTAATATCTGTGGCTGGAATGGTTTCTGCTaGACAGCATTGCCAACTAATGGCTCTGTCTTTTCC +
Preference number: 3 (lower is better)
Translates to: RSCNICGWNGFC*TALPTNGSVFS
Trigger: GGAAAAGACAGAGCCATTAGTTGGCAATGCTGTGCAGCAGAAACCATTCCAGCCACAGATATTACATGACCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
3UTR GCA 72 bp CCACGGTCATGTAATATCTGTGGCTGGAATGGTTTCTaGTGCACAGCATTGCCAACTAATGGCTCTGTCTTT +
Preference number: 3 (lower is better)
Translates to: PRSCNICGWNGF*CTALPTNGSVF
Trigger: AAAGACAGAGCCATTAGTTGGCAATGCTGTGCAGCAGAAACCATTCCAGCCACAGATATTACATGACCGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
3UTR GCA 72 bp TCAAGGTTTATTCAATGGCACAGCTGTGGAAACCAATaGTATCAGGGAGAAGTCCAACTCGAGCCCATGAAC +
Preference number: 3 (lower is better)
Translates to: SRFIQWHSCGNQ*YQGEVQLEPMN
Trigger: GTTCATGGGCTCGAGTTGGACTTCTCCCTGATAGCATTGGTTTCCACAGCTGTGCCATTGAATAAACCTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
3UTR-3UTR CAA 90 bp AAATTAGCTGCCTGTTCCTGGCCATTTCTGCAGACACAGTACTGGCTAATAAGCTGCTTCATTGATGATTaGGAACCTGGTGCTGTCTTC +
Preference number: 3 (lower is better)
Translates to: KLAACSWPFLQTQYWLISCFIDD*EPGAVF
Trigger: GAAGACAGCACCAGGTTCCAAATCATCAATGAAGCA...GCTTATTAGCCAGTACTGTGTCTGCAGAAATGGCCAGGAACAGGCAGCTAATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570013.5
3UTR CCA 72 bp AGGTCCAAACTCAAGGTTTATTCAATGGCACAGCTGTaGAAACCAATGCTATCAGGGAGAAGTCCAACTCGA +
Preference number: 3 (lower is better)
Translates to: RSKLKVYSMAQL*KPMLSGRSPTR
Trigger: TCGAGTTGGACTTCTCCCTGATAGCATTGGTTTCCACAGCTGTGCCATTGAATAAACCTTGAGTTTGGACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
3UTR CCA 72 bp GCCAGGAGAGGAACCTTACTTGCTTCATTGATGATTTaGAACCTGGTGCTGTCTTCATCTGTTGTGACTGAA +
Preference number: 3 (lower is better)
Translates to: ARRGTLLASLMI*NLVLSSSVVTE
Trigger: TTCAGTCACAACAGATGAAGACAGCACCAGGTTCCAAATCATCAATGAAGCAAGTAAGGTTCCTCTCCTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567784.5
3UTR-3UTR CAA 90 bp CCCTTCGAGGGTTTGGTAGGTGGAAATCCTAGGAATCTCATTACTAAGGCTTTCGGGAAGGCAAACAGATaGCAGCAAAAATCTCAAAAA +
Preference number: 3 (lower is better)
Translates to: PFEGLVGGNPRNLITKAFGKANR*QQKSQK
Trigger: TTTTTGAGATTTTTGCTGCAATCTGTTTGCCTTCCC...GAAAGCCTTAGTAATGAGATTCCTAGGATTTCCACCTACCAAACCCTCGAAGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318010.12
3UTR-3UTR CAA 90 bp TACCTCTCATTCATTAAGTGCCTACTGGGAGCTAGCCACTTCACAGAGACCTTTCCTTTGGGAAGAATCTaGTACCAGAAAAGCAAATCA +
Preference number: 3 (lower is better)
Translates to: YLSFIKCLLGASHFTETFPLGRI*YQKSKS
Trigger: TGATTTGCTTTTCTGGTACAAGATTCTTCCCAAAGG...AAAGGTCTCTGTGAAGTGGCTAGCTCCCAGTAGGCACTTAATGAATGAGAGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
3UTR TCA 72 bp ACAGAAATAGGAGCAAAGAATCTGTGCAGGTCTCTGTaGGCTTACATATGGTGCAGAGCTCAAATCTCAACT +
Preference number: 3 (lower is better)
Translates to: TEIGAKNLCRSL*AYIWCRAQIST
Trigger: AGTTGAGATTTGAGCTCTGCACCATATGTAAGCTCACAGAGACCTGCACAGATTCTTTGCTCCTATTTCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
3UTR CCA 72 bp ACCTTGCAAACAGGCTTACTTGCTTCATTGATGATTTaGAACCTGGTGCTGTCTTCATCTGTTGTGACTGAA +
Preference number: 3 (lower is better)
Translates to: TLQTGLLASLMI*NLVLSSSVVTE
Trigger: TTCAGTCACAACAGATGAAGACAGCACCAGGTTCCAAATCATCAATGAAGCAAGTAAGCCTGTTTGCAAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570013.5
3UTR-3UTR CAA 90 bp CCCTTCGAGGGTTTGGTAGGTGGAAATCCTAGGAATCTCATTACTAAGGCTTTCCTTGACATTTACATCTaGAAGGAAAGACACACTATG +
Preference number: 3 (lower is better)
Translates to: PFEGLVGGNPRNLITKAFLDIYI*KERHTM
Trigger: CATAGTGTGTCTTTCCTTCAAGATGTAAATGTCAAG...GAAAGCCTTAGTAATGAGATTCCTAGGATTTCCACCTACCAAACCCTCGAAGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
3UTR-3UTR CAA 90 bp TGGTGCAGAGCTCAAATCTCAACTCATACTATGAAATGTGTCCACAAGGAAATGAAACAGAACATGCTCTaGAGGGACATACAATCTAGT +
Preference number: 3 (lower is better)
Translates to: WCRAQISTHTMKCVHKEMKQNML*RDIQSS
Trigger: ACTAGATTGTATGTCCCTCAAGAGCATGTTCTGTTT...CATTTCCTTGTGGACACATTTCATAGTATGAGTTGAGATTTGAGCTCTGCACCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
3UTR TCA 72 bp TACTATGAAATGTGTCCACAAGGAAATGCACAATGTTaGTTGCCTTTGGGAAGAATCTTGTACCAGAAAAGC +
Preference number: 3 (lower is better)
Translates to: YYEMCPQGNAQC*LPLGRILYQKS
Trigger: GCTTTTCTGGTACAAGATTCTTCCCAAAGGCAATCAACATTGTGCATTTCCTTGTGGACACATTTCATAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
3UTR TCA 72 bp TTACAGGTGATGTCAACTTTGATCACTTGCCTAAAGTaGTGTTTACTGGGTTTCTCCCTGGTAATGTTACTA +
Preference number: 3 (lower is better)
Translates to: LQVMSTLITCLK*CLLGFSLVMLL
Trigger: TAGTAACATTACCAGGGAGAAACCCAGTAAACATCACTTTAGGCAAGTGATCAAAGTTGACATCACCTGTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
3UTR TCA 72 bp ACATATGGTGCAGAGCTCAAATCTCAACTCATACTATaGAATGTGTCCACAAGGAAATGCACAATGTTGATT +
Preference number: 3 (lower is better)
Translates to: TYGAELKSQLIL*NVSTRKCTMLI
Trigger: AATCAACATTGTGCATTTCCTTGTGGACACATTTCATAGTATGAGTTGAGATTTGAGCTCTGCACCATATGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
3UTR CCA 72 bp ACTATCATTTATATTAGGGAGGAGCACCCAGTCTTCTaGCTAAGTTTTATTTTAGGTTGGCAAGGGAAATTT +
Preference number: 3 (lower is better)
Translates to: TIIYIREEHPVF*LSFILGWQGKF
Trigger: AAATTTCCCTTGCCAACCTAAAATAAAACTTAGCCAGAAGACTGGGTGCTCCTCCCTAATATAAATGATAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318010.12
3UTR CAA 72 bp GAGGCAAGCCCTGGCAAATGGGCTGCCCAGGTAGGCTaGGCCCACGTTAAAACAGACCCACGCAGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: EASPGKWAAQVG*AHVKTDPRSPA
Trigger: AGCAGGGCTGCGTGGGTCTGTTTTAACGTGGGCCAAGCCTACCTGGGCAGCCCATTTGCCAGGGCTTGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
3UTR CAA 72 bp AGTTGGGCCTGGAAGGATGGTAAGGGCAGGAGGATATaGGCGCCCAGGGATCAGAAGGCACAGAGGTGGCCG +
Preference number: 4 (lower is better)
Translates to: SWAWKDGKGRRI*APRDQKAQRWP
Trigger: CGGCCACCTCTGTGCCTTCTGATCCCTGGGCGCCAATATCCTCCTGCCCTTACCATCCTTCCAGGCCCAACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR TCA 90 bp CGATCTCTAGGGGAGAATAACTCCCACGGCTGCAGCGTATGCAGTGCACACAGAGGTGAGGGGAAAGGTTaGAAGGGGCAGGCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: RSLGENNSHGCSVCSAHRGEGKG*KGQAGP
Trigger: GGGACCTGCCTGCCCCTTTCAACCTTTCCCCTCACC...TCTGTGTGCACTGCATACGCTGCAGCCGTGGGAGTTATTCTCCCCTAGAGATCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR GCA 90 bp ATCTCGGTTACTCAGGATGCTGAGGCAGAAGAATCGCTTGAACCCGGAAAGCAGGGGCAGGCAGGTCCCTaGTCACATCACCAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: ISVTQDAEAEESLEPGKQGQAGP*SHHQGQ
Trigger: CTGCCCCTGGTGATGTGAGCAGGGACCTGCCTGCCC...CTGCTTTCCGGGTTCAAGCGATTCTTCTGCCTCAGCATCCTGAGTAACCGAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR GCA 90 bp GGAGCCACTGAGGTCTGTGGAGCCTTGGGCACCATGACACGACTGGTATGTTGTGAGCAACTCAGCTGCTaGAGCCAGAGCGCCAATGCT +
Preference number: 4 (lower is better)
Translates to: GATEVCGALGTMTRLVCCEQLSC*SQSANA
Trigger: AGCATTGGCGCTCTGGCTGCAGCAGCTGAGTTGCTC...ACAACATACCAGTCGTGTCATGGTGCCCAAGGCTCCACAGACCTCAGTGGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR TCA 90 bp GGAGCCACTGAGGTCTGTGGAGCCTTGGGCACCATGACACGACTGGTATGTTGTCCCACGCAGCCCTGCTaGAGGAATGGAAGCAATAGA +
Preference number: 4 (lower is better)
Translates to: GATEVCGALGTMTRLVCCPTQPC*RNGSNR
Trigger: TCTATTGCTTCCATTCCTTCAGCAGGGCTGCGTGGG...ACAACATACCAGTCGTGTCATGGTGCCCAAGGCTCCACAGACCTCAGTGGCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR TCA 90 bp GGAGCCACTGAGGTCTGTGGAGCCTTGGGCACCATGACACGACTGGTATGTTGTTTGGTCTCGAACTCCTaGACTCAAGTGAACCCCCTG +
Preference number: 4 (lower is better)
Translates to: GATEVCGALGTMTRLVCCLVSNS*TQVNPL
Trigger: CAGGGGGTTCACTTGAGTTCAGGAGTTCGAGACCAA...ACAACATACCAGTCGTGTCATGGTGCCCAAGGCTCCACAGACCTCAGTGGCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR GCA 90 bp CCTGTAGGCCAACTCAGCCCCATGTTGCTCTCTGGTACACAAATTCAGAAATGGCCCTGGCAAATGGGCTaGCCAGGTAGGCTTGGCCCA +
Preference number: 4 (lower is better)
Translates to: PVGQLSPMLLSGTQIQKWPWQMG*PGRLGP
Trigger: TGGGCCAAGCCTACCTGGGCAGCCCATTTGCCAGGG...CCATTTCTGAATTTGTGTACCAGAGAGCAACATGGGGCTGAGTTGGCCTACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR CCA 90 bp ATCTCGGTTACTCAGGATGCTGAGGCAGAAGAATCGCTTGAACCCGGAAAGCAGGCAAGCCCTGGCAAATaGGCTGCCCAGGTAGGCTTG +
Preference number: 4 (lower is better)
Translates to: ISVTQDAEAEESLEPGKQASPGK*AAQVGL
Trigger: CAAGCCTACCTGGGCAGCCCATTTGCCAGGGCTTGC...CTGCTTTCCGGGTTCAAGCGATTCTTCTGCCTCAGCATCCTGAGTAACCGAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR GCA 90 bp ATCTCGGTTACTCAGGATGCTGAGGCAGAAGAATCGCTTGAACCCGGAAAGCAGGGGAGTACCAGAGGCTaGTGTCCACTTGGACACTGG +
Preference number: 4 (lower is better)
Translates to: ISVTQDAEAEESLEPGKQGSTRG*CPLGHW
Trigger: CCAGTGTCCAAGTGGACAGCAGCCTCTGGTACTCCC...CTGCTTTCCGGGTTCAAGCGATTCTTCTGCCTCAGCATCCTGAGTAACCGAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR GCA 90 bp ATCTCGGTTACTCAGGATGCTGAGGCAGAAGAATCGCTTGAACCCGGAAAGCAGCACACAGAAGAGGGCTaGTCTGCCCAGTCCATGTGG +
Preference number: 4 (lower is better)
Translates to: ISVTQDAEAEESLEPGKQHTEEG*SAQSMW
Trigger: CCACATGGACTGGGCAGAGCAGCCCTCTTCTGTGTG...CTGCTTTCCGGGTTCAAGCGATTCTTCTGCCTCAGCATCCTGAGTAACCGAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR GCA 90 bp CGATCTCTAGGGGAGAATAACTCCCACGGCTGCAGCGTATGCAGTGCACACAGAAATAACTCCCACGGCTaGAGCGTATGCAGTGCACAC +
Preference number: 4 (lower is better)
Translates to: RSLGENNSHGCSVCSAHRNNSHG*SVCSAH
Trigger: GTGTGCACTGCATACGCTGCAGCCGTGGGAGTTATT...TCTGTGTGCACTGCATACGCTGCAGCCGTGGGAGTTATTCTCCCCTAGAGATCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR CCA 90 bp GGAGCCACTGAGGTCTGTGGAGCCTTGGGCACCATGACACGACTGGTATGTTGTCTGCATGGTTTGCTCTaGCCCTCTAAAGACAGAAGG +
Preference number: 4 (lower is better)
Translates to: GATEVCGALGTMTRLVCCLHGLL*PSKDRR
Trigger: CCTTCTGTCTTTAGAGGGCCAGAGCAAACCATGCAG...ACAACATACCAGTCGTGTCATGGTGCCCAAGGCTCCACAGACCTCAGTGGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR TCA 90 bp CGATCTCTAGGGGAGAATAACTCCCACGGCTGCAGCGTATGCAGTGCACACAGATGTGTCCCCAGAGCATaGAATCAGCCTTACAGTGCT +
Preference number: 4 (lower is better)
Translates to: RSLGENNSHGCSVCSAHRCVPRA*NQPYSA
Trigger: AGCACTGTAAGGCTGATTTCATGCTCTGGGGACACA...TCTGTGTGCACTGCATACGCTGCAGCCGTGGGAGTTATTCTCCCCTAGAGATCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR TCA 90 bp CGATCTCTAGGGGAGAATAACTCCCACGGCTGCAGCGTATGCAGTGCACACAGACTGAGAGGTGTCCACTaGTGTCTCCTCCTCATTTTC +
Preference number: 4 (lower is better)
Translates to: RSLGENNSHGCSVCSAHRLRGVH*CLLLIF
Trigger: GAAAATGAGGAGGAGACATCAGTGGACACCTCTCAG...TCTGTGTGCACTGCATACGCTGCAGCCGTGGGAGTTATTCTCCCCTAGAGATCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR TCA 90 bp ATCTCGGTTACTCAGGATGCTGAGGCAGAAGAATCGCTTGAACCCGGAAAGCAGTGTGCTGAGGAGTGCTaGGGAGTCGAGGCTGCTAAA +
Preference number: 4 (lower is better)
Translates to: ISVTQDAEAEESLEPGKQCAEEC*GVEAAK
Trigger: TTTAGCAGCCTCGACTCCTCAGCACTCCTCAGCACA...CTGCTTTCCGGGTTCAAGCGATTCTTCTGCCTCAGCATCCTGAGTAACCGAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR TCA 90 bp GCTGCCTGTTCCTGGCCATTTCTGCAGACACAGTACTGGCTAATAAGCGGTAGTTTGTGCCTTATCTGCTaGGAAGGTGGCTGGTTGGGC +
Preference number: 4 (lower is better)
Translates to: AACSWPFLQTQYWLISGSLCLIC*EGGWLG
Trigger: GCCCAACCAGCCACCTTCTCAGCAGATAAGGCACAA...ACTACCGCTTATTAGCCAGTACTGTGTCTGCAGAAATGGCCAGGAACAGGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570013.5
CDS-3UTR CCA 90 bp CTCTTCCTTGGTAGGTTGATCTTGCTTTTCCTGAGGCACCAGGACTCTTCACTGGGCATCCAGAGTTGTTaGGCTCTGGTCCTGGCACCT +
Preference number: 4 (lower is better)
Translates to: LFLGRLILLFLRHQDSSLGIQSC*ALVLAP
Trigger: AGGTGCCAGGACCAGAGCCCAACAACTCTGGATGCC...CAGTGAAGAGTCCTGGTGCCTCAGGAAAAGCAAGATCAACCTACCAAGGAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440615.6
CDS-3UTR CCA 90 bp GCAAGGGGTAACTTCACAGAGGTGCTCAGAGATATTCCTGCATCCTCGGAGAAGTTCCCCAAGGACAACTaGCCTGTCCAGGTGTGCTTC +
Preference number: 4 (lower is better)
Translates to: ARGNFTEVLRDIPASSEKFPKDN*PVQVCF
Trigger: GAAGCACACCTGGACAGGCCAGTTGTCCTTGGGGAA...CTTCTCCGAGGATGCAGGAATATCTCTGAGCACCTCTGTGAAGTTACCCCTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570013.5
3UTR CAA 72 bp CAGGGATCAGAAGGCACAGAGGTGGCCGTTAGCAAGTaGCTAAGTGGAGGAAGCCTGATAAGAAGAGGTGTG +
Preference number: 4 (lower is better)
Translates to: QGSEGTEVAVSK*LSGGSLIRRGV
Trigger: CACACCTCTTCTTATCAGGCTTCCTCCACTTAGCAACTTGCTAACGGCCACCTCTGTGCCTTCTGATCCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR TCA 90 bp AAGCCACTGTTTCTGACGCCAGGCATTCACTGTAGACTTCCCTCTAGATACCTGGTCCAGGTGTGCTTCTaGTTGTCTGGCCAGTTCCCA +
Preference number: 4 (lower is better)
Translates to: KPLFLTPGIHCRLPSRYLVQVCF*LSGQFP
Trigger: TGGGAACTGGCCAGACAATCAGAAGCACACCTGGAC...CAGGTATCTAGAGGGAAGTCTACAGTGAATGCCTGGCGTCAGAAACAGTGGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570013.5
CDS-3UTR GCA 90 bp CAAGGGGTAACTTCACAGAGGTGCTCAGAGATATTCCTGCATCCTCGGAGAAGCCATCCTCGGAGAAGCTaGTGGAAGTGTTGTCTCTGG +
Preference number: 4 (lower is better)
Translates to: QGVTSQRCSEIFLHPRRSHPRRS*WKCCLW
Trigger: CCAGAGACAACACTTCCAGCAGCTTCTCCGAGGATG...GCTTCTCCGAGGATGCAGGAATATCTCTGAGCACCTCTGTGAAGTTACCCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570013.5
CDS-3UTR CCA 90 bp GGAGCCACTGAGGTCTGTGGAGCCTTGGGCACCATGACACGACTGGTATGTTGTAACTGTGGTGGCTTTTaGTTCTGTGACTGGATGAAC +
Preference number: 4 (lower is better)
Translates to: GATEVCGALGTMTRLVCCNCGGF*FCDWMN
Trigger: GTTCATCCAGTCACAGAACCAAAAGCCACCACAGTT...ACAACATACCAGTCGTGTCATGGTGCCCAAGGCTCCACAGACCTCAGTGGCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR CCA 90 bp ATATCTGTGGCTGGAATGGTTTCTGCTGCACAGCATTGCCAACTAATGGCTCTGAGGGCAGGAGGATATTaGCGCCCAGGGATCAGAAGG +
Preference number: 4 (lower is better)
Translates to: ISVAGMVSAAQHCQLMALRAGGY*RPGIRR
Trigger: CCTTCTGATCCCTGGGCGCCAATATCCTCCTGCCCT...CAGAGCCATTAGTTGGCAATGCTGTGCAGCAGAAACCATTCCAGCCACAGATAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR CCA 90 bp ATCTCGGTTACTCAGGATGCTGAGGCAGAAGAATCGCTTGAACCCGGAAAGCAGTCTCTGTCACCAGGCTaGAGTGCACTGGTGCAATCT +
Preference number: 4 (lower is better)
Translates to: ISVTQDAEAEESLEPGKQSLSPG*SALVQS
Trigger: AGATTGCACCAGTGCACTCCAGCCTGGTGACAGAGA...CTGCTTTCCGGGTTCAAGCGATTCTTCTGCCTCAGCATCCTGAGTAACCGAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR TCA 90 bp ATCTCGGTTACTCAGGATGCTGAGGCAGAAGAATCGCTTGAACCCGGAAAGCAGTGCTTGGCTTGCTTGTaGGGACATCCGGAACTTCAA +
Preference number: 4 (lower is better)
Translates to: ISVTQDAEAEESLEPGKQCLACL*GHPELQ
Trigger: TTGAAGTTCCGGATGTCCTCACAAGCAAGCCAAGCA...CTGCTTTCCGGGTTCAAGCGATTCTTCTGCCTCAGCATCCTGAGTAACCGAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR TCA 90 bp CGATCTCTAGGGGAGAATAACTCCCACGGCTGCAGCGTATGCAGTGCACACAGAGTAAAAGCCACAGGCTaGTCTTTACCATCAGATGAG +
Preference number: 4 (lower is better)
Translates to: RSLGENNSHGCSVCSAHRVKATG*SLPSDE
Trigger: CTCATCTGATGGTAAAGATCAGCCTGTGGCTTTTAC...TCTGTGTGCACTGCATACGCTGCAGCCGTGGGAGTTATTCTCCCCTAGAGATCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR TCA 90 bp GGAGCCACTGAGGTCTGTGGAGCCTTGGGCACCATGACACGACTGGTATGTTGTGAGGTAGGTAAAGTGTaGGAAGCAATAAGAGCAGAA +
Preference number: 4 (lower is better)
Translates to: GATEVCGALGTMTRLVCCEVGKV*EAIRAE
Trigger: TTCTGCTCTTATTGCTTCTCACACTTTACCTACCTC...ACAACATACCAGTCGTGTCATGGTGCCCAAGGCTCCACAGACCTCAGTGGCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR GCA 90 bp GGAGCCACTGAGGTCTGTGGAGCCTTGGGCACCATGACACGACTGGTATGTTGTTACCTTGAATGGGTTTaGTGTGATATGGCACTTCAG +
Preference number: 4 (lower is better)
Translates to: GATEVCGALGTMTRLVCCYLEWV*CDMALQ
Trigger: CTGAAGTGCCATATCACAGCAAACCCATTCAAGGTA...ACAACATACCAGTCGTGTCATGGTGCCCAAGGCTCCACAGACCTCAGTGGCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR GCA 90 bp CGATCTCTAGGGGAGAATAACTCCCACGGCTGCAGCGTATGCAGTGCACACAGATTCTTCTGCATGGTTTaGTCTGGCCCTCTAAAGACA +
Preference number: 4 (lower is better)
Translates to: RSLGENNSHGCSVCSAHRFFCMV*SGPLKT
Trigger: TGTCTTTAGAGGGCCAGAGCAAACCATGCAGAAGAA...TCTGTGTGCACTGCATACGCTGCAGCCGTGGGAGTTATTCTCCCCTAGAGATCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR GCA 90 bp TACCTCTCATTCATTAAGTGCCTACTGGGAGCTAGCCACTTCACAGAGACCTTTCACGGCTGCAGCGTATaGAGTGCACACAGAAGAGGG +
Preference number: 4 (lower is better)
Translates to: YLSFIKCLLGASHFTETFHGCSV*SAHRRG
Trigger: CCCTCTTCTGTGTGCACTGCATACGCTGCAGCCGTG...AAAGGTCTCTGTGAAGTGGCTAGCTCCCAGTAGGCACTTAATGAATGAGAGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR GCA 90 bp CGATCTCTAGGGGAGAATAACTCCCACGGCTGCAGCGTATGCAGTGCACACAGAAACTCAGCCCCATGTTaGTCTCTGGTACACAAATTC +
Preference number: 4 (lower is better)
Translates to: RSLGENNSHGCSVCSAHRNSAPC*SLVHKF
Trigger: GAATTTGTGTACCAGAGAGCAACATGGGGCTGAGTT...TCTGTGTGCACTGCATACGCTGCAGCCGTGGGAGTTATTCTCCCCTAGAGATCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR GCA 90 bp ATCTCGGTTACTCAGGATGCTGAGGCAGAAGAATCGCTTGAACCCGGAAAGCAGACAGGCGTAAGCCACTaGACCCAGGCTAGAGATTAT +
Preference number: 4 (lower is better)
Translates to: ISVTQDAEAEESLEPGKQTGVSH*TQARDY
Trigger: ATAATCTCTAGCCTGGGTGCAGTGGCTTACGCCTGT...CTGCTTTCCGGGTTCAAGCGATTCTTCTGCCTCAGCATCCTGAGTAACCGAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR GCA 90 bp GGCCTGTCCAGGTGTGCTTCTGATTGTCTGGCCAGTTCCCAAATTAGCTGCCTGAGTTCCCAAATTAGCTaGCTGTTCCTGGCCATTTCT +
Preference number: 4 (lower is better)
Translates to: GLSRCASDCLASSQISCLSSQIS*LFLAIS
Trigger: AGAAATGGCCAGGAACAGGCAGCTAATTTGGGAACT...CAGGCAGCTAATTTGGGAACTGGCCAGACAATCAGAAGCACACCTGGACAGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570013.5
CDS-3UTR CCA 90 bp AAGCCACTGTTTCTGACGCCAGGCATTCACTGTAGACTTCCCTCTAGATACCTGTCATCGTCAAGTTTCTaGGAAGGGAGTCCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: KPLFLTPGIHCRLPSRYLSSSSF*EGSPLQ
Trigger: CTGGAGGGGACTCCCTTCCCAGAAACTTGACGATGA...CAGGTATCTAGAGGGAAGTCTACAGTGAATGCCTGGCGTCAGAAACAGTGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567784.5
ENST00000570013.5
CDS-3UTR CCA 90 bp CCCTTCGAGGGTTTGGTAGGTGGAAATCCTAGGAATCTCATTACTAAGGCTTTCGTGTTCATGGTGGCATaGCCACGGAAGAAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: PFEGLVGGNPRNLITKAFVFMVA*PRKKGW
Trigger: CCAGCCCTTCTTCCGTGGCCATGCCACCATGAACAC...GAAAGCCTTAGTAATGAGATTCCTAGGATTTCCACCTACCAAACCCTCGAAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR CCA 90 bp CGATCTCTAGGGGAGAATAACTCCCACGGCTGCAGCGTATGCAGTGCACACAGATTACCATCAGATGAGTaGGTAGTCACAGAAGATGGC +
Preference number: 4 (lower is better)
Translates to: RSLGENNSHGCSVCSAHRLPSDE*VVTEDG
Trigger: GCCATCTTCTGTGACTACCCACTCATCTGATGGTAA...TCTGTGTGCACTGCATACGCTGCAGCCGTGGGAGTTATTCTCCCCTAGAGATCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR CCA 90 bp AGAATGCTAGCTATATGGCCTCCATTGTCAGTGGCTAATATGATAGCCTGTTTCAGCGCCAATGCTGCATaGCCTGAGGCAAGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: RMLAIWPPLSVANMIACFSANAA*PEASPG
Trigger: GCCAGGGCTTGCCTCAGGCCATGCAGCATTGGCGCT...GAAACAGGCTATCATATTAGCCACTGACAATGGAGGCCATATAGCTAGCATTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR CCA 90 bp ATATCTGTGGCTGGAATGGTTTCTGCTGCACAGCATTGCCAACTAATGGCTCTGAGGCTGCTGTCCACTTaGACACTGGCCTTGAGCAAC +
Preference number: 4 (lower is better)
Translates to: ISVAGMVSAAQHCQLMALRLLST*TLALSN
Trigger: GTTGCTCAAGGCCAGTGTCCAAGTGGACAGCAGCCT...CAGAGCCATTAGTTGGCAATGCTGTGCAGCAGAAACCATTCCAGCCACAGATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR CCA 90 bp ATCTCGGTTACTCAGGATGCTGAGGCAGAAGAATCGCTTGAACCCGGAAAGCAGGGCTTCATGGGAAAGTaGGATTTAAGTTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: ISVTQDAEAEESLEPGKQGFMGK*DLSWAW
Trigger: CCAGGCCCAACTTAAATCCCACTTTCCCATGAAGCC...CTGCTTTCCGGGTTCAAGCGATTCTTCTGCCTCAGCATCCTGAGTAACCGAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR CCA 90 bp AGCCCCATGTTGCTCTCTGGTACACAAATTCAGAAATGGGAGGTAGGTAAAGTGGCAGCTGTTGCACTTTaGGAGGCAGAGGCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: SPMLLSGTQIQKWEVGKVAAVAL*EAEAGG
Trigger: TCCACCTGCCTCTGCCTCCCAAAGTGCAACAGCTGC...CACTTTACCTACCTCCCATTTCTGAATTTGTGTACCAGAGAGCAACATGGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
3UTR CAA 72 bp ATCCCTTACATTTTGTGCCCAAGGCCAGGGTCTCCCTaGCCTCATCCTAGTCCCAGTCATGAGTTCTACTTC +
Preference number: 4 (lower is better)
Translates to: IPYILCPRPGSP*PHPSPSHEFYF
Trigger: GAAGTAGAACTCATGACTGGGACTAGGATGAGGCAAGGGAGACCCTGGCCTTGGGCACAAAATGTAAGGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR TCA 90 bp AGCCCCATGTTGCTCTCTGGTACACAAATTCAGAAATGGGAGGTAGGTAAAGTGAGAAGAGGTGTGTGCTaGGGAGTGCTGAGGAGTCGA +
Preference number: 4 (lower is better)
Translates to: SPMLLSGTQIQKWEVGKVRRGVC*GVLRSR
Trigger: TCGACTCCTCAGCACTCCTCAGCACACACCTCTTCT...CACTTTACCTACCTCCCATTTCTGAATTTGTGTACCAGAGAGCAACATGGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR TCA 90 bp TACCTCTCATTCATTAAGTGCCTACTGGGAGCTAGCCACTTCACAGAGACCTTTTTCCAGTGGAGCTGCTaGTGGCTTTCTACCCACTGG +
Preference number: 4 (lower is better)
Translates to: YLSFIKCLLGASHFTETFFQWSC*WLSTHW
Trigger: CCAGTGGGTAGAAAGCCATCAGCAGCTCCACTGGAA...AAAGGTCTCTGTGAAGTGGCTAGCTCCCAGTAGGCACTTAATGAATGAGAGGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR GCA 90 bp CCCTTCGAGGGTTTGGTAGGTGGAAATCCTAGGAATCTCATTACTAAGGCTTTCCTCCTGAGCAGCTCTTaGATCCTCTTGGGGTTTGGG +
Preference number: 4 (lower is better)
Translates to: PFEGLVGGNPRNLITKAFLLSSS*ILLGFG
Trigger: CCCAAACCCCAAGAGGATGCAAGAGCTGCTCAGGAG...GAAAGCCTTAGTAATGAGATTCCTAGGATTTCCACCTACCAAACCCTCGAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR GCA 90 bp CCTGTAGGCCAACTCAGCCCCATGTTGCTCTCTGGTACACAAATTCAGAAATGGTCTCCACCACACACTTaGTGGGATAATGACCCCTCT +
Preference number: 4 (lower is better)
Translates to: PVGQLSPMLLSGTQIQKWSPPHT*WDNDPS
Trigger: AGAGGGGTCATTATCCCAGCAAGTGTGTGGTGGAGA...CCATTTCTGAATTTGTGTACCAGAGAGCAACATGGGGCTGAGTTGGCCTACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR CCA 90 bp TACCTCTCATTCATTAAGTGCCTACTGGGAGCTAGCCACTTCACAGAGACCTTTGCTTGGTGTTCATGGTaGCATGGCCACGGAAGAAGG +
Preference number: 4 (lower is better)
Translates to: YLSFIKCLLGASHFTETFAWCSW*HGHGRR
Trigger: CCTTCTTCCGTGGCCATGCCACCATGAACACCAAGC...AAAGGTCTCTGTGAAGTGGCTAGCTCCCAGTAGGCACTTAATGAATGAGAGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR CCA 90 bp TACCTCTCATTCATTAAGTGCCTACTGGGAGCTAGCCACTTCACAGAGACCTTTGTCGCTTGGTGTTCATaGTGGCATGGCCACGGAAGA +
Preference number: 4 (lower is better)
Translates to: YLSFIKCLLGASHFTETFVAWCS*WHGHGR
Trigger: TCTTCCGTGGCCATGCCACCATGAACACCAAGCGAC...AAAGGTCTCTGTGAAGTGGCTAGCTCCCAGTAGGCACTTAATGAATGAGAGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR CCA 90 bp CGATCTCTAGGGGAGAATAACTCCCACGGCTGCAGCGTATGCAGTGCACACAGATTCTGGTGGAGGTATTaGAATGAATGGCCATCATCA +
Preference number: 4 (lower is better)
Translates to: RSLGENNSHGCSVCSAHRFWWRY*NEWPSS
Trigger: TGATGATGGCCATTCATTCCAATACCTCCACCAGAA...TCTGTGTGCACTGCATACGCTGCAGCCGTGGGAGTTATTCTCCCCTAGAGATCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR CCA 90 bp CCTGTAGGCCAACTCAGCCCCATGTTGCTCTCTGGTACACAAATTCAGAAATGGCTAATACCGTCGGCCTaGGTGGAAACAACTGTCAAG +
Preference number: 4 (lower is better)
Translates to: PVGQLSPMLLSGTQIQKWLIPSA*VETTVK
Trigger: CTTGACAGTTGTTTCCACCCAGGCCGACGGTATTAG...CCATTTCTGAATTTGTGTACCAGAGAGCAACATGGGGCTGAGTTGGCCTACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR CCA 90 bp CTCTTCCTTGGTAGGTTGATCTTGCTTTTCCTGAGGCACCAGGACTCTTCACTGTATCTGCTGAGAAGGTaGCTGGTTGGGCAAAGCTTC +
Preference number: 4 (lower is better)
Translates to: LFLGRLILLFLRHQDSSLYLLRR*LVGQSF
Trigger: GAAGCTTTGCCCAACCAGCCACCTTCTCAGCAGATA...CAGTGAAGAGTCCTGGTGCCTCAGGAAAAGCAAGATCAACCTACCAAGGAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440615.6
CDS-3UTR CCA 90 bp GGGGTAACTTCACAGAGGTGCTCAGAGATATTCCTGCATCCTCGGAGAAGCTGCCTGCAGACACAGTACTaGCTAATAAGCGGTAGTTGT +
Preference number: 4 (lower is better)
Translates to: GVTSQRCSEIFLHPRRSCLQTQY*LISGSC
Trigger: ACAACTACCGCTTATTAGCCAGTACTGTGTCTGCAG...GCAGCTTCTCCGAGGATGCAGGAATATCTCTGAGCACCTCTGTGAAGTTACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570013.5
CDS-3UTR CCA 90 bp TTGATCTTGCTTTTCCTGAGGCACCAGGACTCTTCACTGTTATGTAAAGAACTGCCTCACGCTGGGCACTaGCCTGTTCCCCAAGGACAA +
Preference number: 4 (lower is better)
Translates to: LILLFLRHQDSSLLCKELPHAGH*PVPQGQ
Trigger: TTGTCCTTGGGGAACAGGCCAGTGCCCAGCGTGAGG...CAGTTCTTTACATAACAGTGAAGAGTCCTGGTGCCTCAGGAAAAGCAAGATCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440615.6
CDS-3UTR TCA 90 bp ATATCTGTGGCTGGAATGGTTTCTGCTGCACAGCATTGCCAACTAATGGCTCTGTGTTTTTGTCCCAGGTaGAGTACCTCTTGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: ISVAGMVSAAQHCQLMALCFCPR*STSCPQ
Trigger: CTGAGGGCAAGAGGTACTTCACCTGGGACAAAAACA...CAGAGCCATTAGTTGGCAATGCTGTGCAGCAGAAACCATTCCAGCCACAGATAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR TCA 90 bp CCTGTAGGCCAACTCAGCCCCATGTTGCTCTCTGGTACACAAATTCAGAAATGGAAGTCTTCCCCTTCCTaGTTCTTCACAAAGAAGCCC +
Preference number: 4 (lower is better)
Translates to: PVGQLSPMLLSGTQIQKWKSSPS*FFTKKP
Trigger: GGGCTTCTTTGTGAAGAATCAGGAAGGGGAAGACTT...CCATTTCTGAATTTGTGTACCAGAGAGCAACATGGGGCTGAGTTGGCCTACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR TCA 90 bp CCTGTAGGCCAACTCAGCCCCATGTTGCTCTCTGGTACACAAATTCAGAAATGGAAGATGGCTCCTTCCTaGAGCCTAAGACCAAGATCT +
Preference number: 4 (lower is better)
Translates to: PVGQLSPMLLSGTQIQKWKMAPS*SLRPRS
Trigger: AGATCTTGGTCTTAGGCTTCAGGAAGGAGCCATCTT...CCATTTCTGAATTTGTGTACCAGAGAGCAACATGGGGCTGAGTTGGCCTACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR TCA 90 bp TACCTCTCATTCATTAAGTGCCTACTGGGAGCTAGCCACTTCACAGAGACCTTTGAGCCTTGGGCACCATaGCACGACTGGTATGTTGTA +
Preference number: 4 (lower is better)
Translates to: YLSFIKCLLGASHFTETFEPWAP*HDWYVV
Trigger: TACAACATACCAGTCGTGTCATGGTGCCCAAGGCTC...AAAGGTCTCTGTGAAGTGGCTAGCTCCCAGTAGGCACTTAATGAATGAGAGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR TCA 90 bp TACCTCTCATTCATTAAGTGCCTACTGGGAGCTAGCCACTTCACAGAGACCTTTGGCAGGAGGATTGTTTaGGTCCGGGAGTTCAAGACT +
Preference number: 4 (lower is better)
Translates to: YLSFIKCLLGASHFTETFGRRIV*VREFKT
Trigger: AGTCTTGAACTCCCGGACTCAAACAATCCTCCTGCC...AAAGGTCTCTGTGAAGTGGCTAGCTCCCAGTAGGCACTTAATGAATGAGAGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR TCA 90 bp ACAAGCTCAGATAGAAATCCCCACTATACGCACAAAGCTGGATTCAAATTATTCGAAACTGGGCGGCGGTaGGGGCGTGTACGCAATGAG +
Preference number: 4 (lower is better)
Translates to: TSSDRNPHYTHKAGFKLFETGRR*GRVRNE
Trigger: CTCATTGCGTACACGCCCTCACCGCCGCCCAGTTTC...GAATAATTTGAATCCAGCTTTGTGCGTATAGTGGGGATTTCTATCTGAGCTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566442.5
CDS-3UTR GCA 90 bp CCCTTCGAGGGTTTGGTAGGTGGAAATCCTAGGAATCTCATTACTAAGGCTTTCATCCCTTACATTTTGTaGCCAAGGCCAGGGTCTCCC +
Preference number: 4 (lower is better)
Translates to: PFEGLVGGNPRNLITKAFIPYIL*PRPGSP
Trigger: GGGAGACCCTGGCCTTGGGCACAAAATGTAAGGGAT...GAAAGCCTTAGTAATGAGATTCCTAGGATTTCCACCTACCAAACCCTCGAAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR GCA 90 bp TACCTCTCATTCATTAAGTGCCTACTGGGAGCTAGCCACTTCACAGAGACCTTTTCAAGAAGCAGCTGTTaGACTTTGGGAGGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: YLSFIKCLLGASHFTETFSRSSC*TLGGRG
Trigger: GCCTCTGCCTCCCAAAGTGCAACAGCTGCTTCTTGA...AAAGGTCTCTGTGAAGTGGCTAGCTCCCAGTAGGCACTTAATGAATGAGAGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR GCA 90 bp ATATCTGTGGCTGGAATGGTTTCTGCTGCACAGCATTGCCAACTAATGGCTCTGTTCAAGCGATTCTCCTaGCTCAGTCTCCTGAACAGC +
Preference number: 4 (lower is better)
Translates to: ISVAGMVSAAQHCQLMALFKRFS*LSLLNS
Trigger: GCTGTTCAGGAGACTGAGGCAGGAGAATCGCTTGAA...CAGAGCCATTAGTTGGCAATGCTGTGCAGCAGAAACCATTCCAGCCACAGATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR GCA 90 bp CCTGTAGGCCAACTCAGCCCCATGTTGCTCTCTGGTACACAAATTCAGAAATGGCTCTCATTCATTAAGTaGCTACTGGGAGCTAGCCAC +
Preference number: 4 (lower is better)
Translates to: PVGQLSPMLLSGTQIQKWLSFIK*LLGASH
Trigger: GTGGCTAGCTCCCAGTAGGCACTTAATGAATGAGAG...CCATTTCTGAATTTGTGTACCAGAGAGCAACATGGGGCTGAGTTGGCCTACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR GCA 90 bp ATATCTGTGGCTGGAATGGTTTCTGCTGCACAGCATTGCCAACTAATGGCTCTGGGCTGGAATGGTTTCTaGTGCACAGCATTGCCAACT +
Preference number: 4 (lower is better)
Translates to: ISVAGMVSAAQHCQLMALGWNGF*CTALPT
Trigger: AGTTGGCAATGCTGTGCAGCAGAAACCATTCCAGCC...CAGAGCCATTAGTTGGCAATGCTGTGCAGCAGAAACCATTCCAGCCACAGATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR GCA 90 bp ACAAGCTCAGATAGAAATCCCCACTATACGCACAAAGCTGGATTCAAATTATTCTGCCGGCCGGGTCTTTaGTGGAGGCTAGGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: TSSDRNPHYTHKAGFKLFCRPGL*WRLGLQ
Trigger: CTGGAGACCTAGCCTCCAGCAAAGACCCGGCCGGCA...GAATAATTTGAATCCAGCTTTGTGCGTATAGTGGGGATTTCTATCTGAGCTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566442.5
CDS-3UTR CCA 90 bp TCCTCGGAGAAGCTGCTGGAAGTGTTGTCTCTGGTGAAACCTTGCAAACAGGCTCTTGACTCTTGCTCCTaGAATTTTTCAGGCCCAAAC +
Preference number: 4 (lower is better)
Translates to: SSEKLLEVLSLVKPCKQALDSCS*NFSGPN
Trigger: GTTTGGGCCTGAAAAATTCCAGGAGCAAGAGTCAAG...AGCCTGTTTGCAAGGTTTCACCAGAGACAACACTTCCAGCAGCTTCTCCGAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570013.5
CDS-3UTR CCA 90 bp ATCTCGGTTACTCAGGATGCTGAGGCAGAAGAATCGCTTGAACCCGGAAAGCAGGATAGGTGGACTTCTTaGAAAGCCACTGTTTCTGAC +
Preference number: 4 (lower is better)
Translates to: ISVTQDAEAEESLEPGKQDRWTS*KATVSD
Trigger: GTCAGAAACAGTGGCTTTCCAAGAAGTCCACCTATC...CTGCTTTCCGGGTTCAAGCGATTCTTCTGCCTCAGCATCCTGAGTAACCGAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR CCA 90 bp TACCTCTCATTCATTAAGTGCCTACTGGGAGCTAGCCACTTCACAGAGACCTTTGCAACTGGGCCCATCTaGGTCAGTGTGTACTCTACT +
Preference number: 4 (lower is better)
Translates to: YLSFIKCLLGASHFTETFATGPI*VSVYST
Trigger: AGTAGAGTACACACTGACCCAGATGGGCCCAGTTGC...AAAGGTCTCTGTGAAGTGGCTAGCTCCCAGTAGGCACTTAATGAATGAGAGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR CCA 90 bp GGCTGGTTGGGCAAAGCTTCATTTTCATTAGGCTTAGATGAAGAGGCAAGGGGTTATCTGCTGAGAAGGTaGCTGGTTGGGCAAAGCTTC +
Preference number: 4 (lower is better)
Translates to: GWLGKASFSLGLDEEARGYLLRR*LVGQSF
Trigger: GAAGCTTTGCCCAACCAGCCACCTTCTCAGCAGATA...ACCCCTTGCCTCTTCATCTAAGCCTAATGAAAATGAAGCTTTGCCCAACCAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570013.5
CDS-3UTR CCA 90 bp ACAAGCTCAGATAGAAATCCCCACTATACGCACAAAGCTGGATTCAAATTATTCCGGCCGGGTCTTTGCTaGAGGCTAGGTCTCCAGCCA +
Preference number: 4 (lower is better)
Translates to: TSSDRNPHYTHKAGFKLFRPGLC*RLGLQP
Trigger: TGGCTGGAGACCTAGCCTCCAGCAAAGACCCGGCCG...GAATAATTTGAATCCAGCTTTGTGCGTATAGTGGGGATTTCTATCTGAGCTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566442.5
CDS-3UTR TCA 90 bp TTCAACTCCCAGTGTTTATGTGCTTTGACTGTGTTTCTGCTGCTTATCATTTTGCCCACAGAGGCCTCATaGCAGGTTGGGAAGCCACGT +
Preference number: 4 (lower is better)
Translates to: FNSQCLCALTVFLLLIILPTEAS*QVGKPR
Trigger: ACGTGGCTTCCCAACCTGTCATGAGGCCTCTGTGGG...CAAAATGATAAGCAGCAGAAACACAGTCAAAGCACATAAACACTGGGAGTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR TCA 90 bp ATCTCGGTTACTCAGGATGCTGAGGCAGAAGAATCGCTTGAACCCGGAAAGCAGATACCAGACCTCATTTaGTCCTGGAAGAAACACATC +
Preference number: 4 (lower is better)
Translates to: ISVTQDAEAEESLEPGKQIPDLI*SWKKHI
Trigger: GATGTGTTTCTTCCAGGATCAAATGAGGTCTGGTAT...CTGCTTTCCGGGTTCAAGCGATTCTTCTGCCTCAGCATCCTGAGTAACCGAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR TCA 90 bp TACCTCTCATTCATTAAGTGCCTACTGGGAGCTAGCCACTTCACAGAGACCTTTCAGTTCTTTGTCATATaGTGCGGACCTCCCAGTCAG +
Preference number: 4 (lower is better)
Translates to: YLSFIKCLLGASHFTETFQFFVI*CGPPSQ
Trigger: CTGACTGGGAGGTCCGCATCATATGACAAAGAACTG...AAAGGTCTCTGTGAAGTGGCTAGCTCCCAGTAGGCACTTAATGAATGAGAGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR TCA 90 bp TGGTGCAGAGCTCAAATCTCAACTCATACTATGAAATGTGTCCACAAGGAAATGCTTGGACACTGGCCTTaGGCAACTCAGCTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: WCRAQISTHTMKCVHKEMLGHWP*ATQLLQ
Trigger: CTGCAGCAGCTGAGTTGCTCAAGGCCAGTGTCCAAG...CATTTCCTTGTGGACACATTTCATAGTATGAGTTGAGATTTGAGCTCTGCACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR TCA 90 bp CGATCTCTAGGGGAGAATAACTCCCACGGCTGCAGCGTATGCAGTGCACACAGAACAGCTAACAGTTACTaGAAGTCAGGTATAATAGTG +
Preference number: 4 (lower is better)
Translates to: RSLGENNSHGCSVCSAHRTANSY*KSGIIV
Trigger: CACTATTATACCTGACTTTCAGTAACTGTTAGCTGT...TCTGTGTGCACTGCATACGCTGCAGCCGTGGGAGTTATTCTCCCCTAGAGATCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR TCA 90 bp TTGATCTTGCTTTTCCTGAGGCACCAGGACTCTTCACTGTTATGTAAAGAACTGTTGTGCCTTATCTGCTaGGAAGGTGGCTGGTTGGGC +
Preference number: 4 (lower is better)
Translates to: LILLFLRHQDSSLLCKELLCLIC*EGGWLG
Trigger: GCCCAACCAGCCACCTTCTCAGCAGATAAGGCACAA...CAGTTCTTTACATAACAGTGAAGAGTCCTGGTGCCTCAGGAAAAGCAAGATCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440615.6
CDS-3UTR GCA 90 bp CCTGTAGGCCAACTCAGCCCCATGTTGCTCTCTGGTACACAAATTCAGAAATGGCTCTGTGCTCCCAATTaGCATGATGAATGGCATTCT +
Preference number: 4 (lower is better)
Translates to: PVGQLSPMLLSGTQIQKWLCAPN*HDEWHS
Trigger: AGAATGCCATTCATCATGGCAATTGGGAGCACAGAG...CCATTTCTGAATTTGTGTACCAGAGAGCAACATGGGGCTGAGTTGGCCTACAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR GCA 90 bp CCCTTCGAGGGTTTGGTAGGTGGAAATCCTAGGAATCTCATTACTAAGGCTTTCCAAGTTGCTCCATTCTaGTGTGTTGTCGCCTGTCCA +
Preference number: 4 (lower is better)
Translates to: PFEGLVGGNPRNLITKAFQVAPF*CVVACP
Trigger: TGGACAGGCGACAACACAGCAGAATGGAGCAACTTG...GAAAGCCTTAGTAATGAGATTCCTAGGATTTCCACCTACCAAACCCTCGAAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR GCA 90 bp CAAGGGGTAACTTCACAGAGGTGCTCAGAGATATTCCTGCATCCTCGGAGAAGCGTAACTTCACAGAGGTaGTCAGAGATATTCCTGCAT +
Preference number: 4 (lower is better)
Translates to: QGVTSQRCSEIFLHPRRSVTSQR*SEIFLH
Trigger: ATGCAGGAATATCTCTGAGCACCTCTGTGAAGTTAC...GCTTCTCCGAGGATGCAGGAATATCTCTGAGCACCTCTGTGAAGTTACCCCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570013.5
CDS-3UTR GCA 90 bp ACAAGCTCAGATAGAAATCCCCACTATACGCACAAAGCTGGATTCAAATTATTCGTTAAGGGTGGGAAGTaGCGGCCGGGTCTTTGCTGG +
Preference number: 4 (lower is better)
Translates to: TSSDRNPHYTHKAGFKLFVKGGK*RPGLCW
Trigger: CCAGCAAAGACCCGGCCGGCACTTCCCACCCTTAAC...GAATAATTTGAATCCAGCTTTGTGCGTATAGTGGGGATTTCTATCTGAGCTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566442.5
CDS-3UTR CCA 90 bp GCAAACAGGCTTACTTGCTTCATTGATGATTTGGAACCTGGTGCTGTCTTCATCTCATCGTCAAGTTTCTaGGAAGGGAGTCCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: ANRLTCFIDDLEPGAVFISSSSF*EGSPLQ
Trigger: CTGGAGGGGACTCCCTTCCCAGAAACTTGACGATGA...GATGAAGACAGCACCAGGTTCCAAATCATCAATGAAGCAAGTAAGCCTGTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570013.5
CDS-3UTR CCA 90 bp ATCTCGGTTACTCAGGATGCTGAGGCAGAAGAATCGCTTGAACCCGGAAAGCAGATAATGCCTGATAGGTaGACTTCTTGGAAAGCCACT +
Preference number: 4 (lower is better)
Translates to: ISVTQDAEAEESLEPGKQIMPDR*TSWKAT
Trigger: AGTGGCTTTCCAAGAAGTCCACCTATCAGGCATTAT...CTGCTTTCCGGGTTCAAGCGATTCTTCTGCCTCAGCATCCTGAGTAACCGAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR CCA 90 bp TACCTCTCATTCATTAAGTGCCTACTGGGAGCTAGCCACTTCACAGAGACCTTTGTAAGAGGAGAGACCTaGCCAACACACCCCTTCAAA +
Preference number: 4 (lower is better)
Translates to: YLSFIKCLLGASHFTETFVRGET*PTHPFK
Trigger: TTTGAAGGGGTGTGTTGGCCAGGTCTCTCCTCTTAC...AAAGGTCTCTGTGAAGTGGCTAGCTCCCAGTAGGCACTTAATGAATGAGAGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR CCA 90 bp CCCTTCGAGGGTTTGGTAGGTGGAAATCCTAGGAATCTCATTACTAAGGCTTTCGATTTAAGTTGGGCCTaGAAGGATGGTAAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: PFEGLVGGNPRNLITKAFDLSWA*KDGKGR
Trigger: CCTGCCCTTACCATCCTTCCAGGCCCAACTTAAATC...GAAAGCCTTAGTAATGAGATTCCTAGGATTTCCACCTACCAAACCCTCGAAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR CCA 90 bp ATCTCGGTTACTCAGGATGCTGAGGCAGAAGAATCGCTTGAACCCGGAAAGCAGCCCCATGTTGCTCTCTaGTACACAAATTCAGAAATG +
Preference number: 4 (lower is better)
Translates to: ISVTQDAEAEESLEPGKQPHVAL*YTNSEM
Trigger: CATTTCTGAATTTGTGTACCAGAGAGCAACATGGGG...CTGCTTTCCGGGTTCAAGCGATTCTTCTGCCTCAGCATCCTGAGTAACCGAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR CCA 90 bp AGGTTGATCTTGCTTTTCCTGAGGCACCAGGACTCTTCACTGTTATGTAAAGAATTCCCCAAGGACAACTaGCCTGTCCAGGTGTGCTTC +
Preference number: 4 (lower is better)
Translates to: RLILLFLRHQDSSLLCKEFPKDN*PVQVCF
Trigger: GAAGCACACCTGGACAGGCCAGTTGTCCTTGGGGAA...TTCTTTACATAACAGTGAAGAGTCCTGGTGCCTCAGGAAAAGCAAGATCAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440615.6
CDS-3UTR CCA 90 bp ACAAGCTCAGATAGAAATCCCCACTATACGCACAAAGCTGGATTCAAATTATTCGTTAGGAACCGAAACTaGGCGGCGGTGAGGGCGTGT +
Preference number: 4 (lower is better)
Translates to: TSSDRNPHYTHKAGFKLFVRNRN*AAVRAC
Trigger: ACACGCCCTCACCGCCGCCCAGTTTCGGTTCCTAAC...GAATAATTTGAATCCAGCTTTGTGCGTATAGTGGGGATTTCTATCTGAGCTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566442.5
CDS-3UTR TCA 90 bp CTCTTCCTTGGTAGGTTGATCTTGCTTTTCCTGAGGCACCAGGACTCTTCACTGTGGAGTGACAAATCTTaGCTCTTGCTCCTGGAATTT +
Preference number: 4 (lower is better)
Translates to: LFLGRLILLFLRHQDSSLWSDKS*LLLLEF
Trigger: AAATTCCAGGAGCAAGAGTCAAGATTTGTCACTCCA...CAGTGAAGAGTCCTGGTGCCTCAGGAAAAGCAAGATCAACCTACCAAGGAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440615.6
CDS-3UTR TCA 90 bp CCTGTAGGCCAACTCAGCCCCATGTTGCTCTCTGGTACACAAATTCAGAAATGGGCAGCTCTTTGTTTGTaGAGAATCTGTAGATGCTCA +
Preference number: 4 (lower is better)
Translates to: PVGQLSPMLLSGTQIQKWAALCL*RICRCS
Trigger: TGAGCATCTACAGATTCTTCACAAACAAAGAGCTGC...CCATTTCTGAATTTGTGTACCAGAGAGCAACATGGGGCTGAGTTGGCCTACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR TCA 90 bp CCTGTAGGCCAACTCAGCCCCATGTTGCTCTCTGGTACACAAATTCAGAAATGGGGTCAGCAAAACTATTaGTCAGAACACTGGAACAGA +
Preference number: 4 (lower is better)
Translates to: PVGQLSPMLLSGTQIQKWGQQNY*SEHWNR
Trigger: TCTGTTCCAGTGTTCTGATCAATAGTTTTGCTGACC...CCATTTCTGAATTTGTGTACCAGAGAGCAACATGGGGCTGAGTTGGCCTACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR TCA 90 bp AGAATGCTAGCTATATGGCCTCCATTGTCAGTGGCTAATATGATAGCCTGTTTCAGTGGCAATGTTGAGTaGGAGCTTCTCCAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: RMLAIWPPLSVANMIACFSGNVE*ELLQAQ
Trigger: CTGAGCCTGGAGAAGCTCTCACTCAACATTGCCACT...GAAACAGGCTATCATATTAGCCACTGACAATGGAGGCCATATAGCTAGCATTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR TCA 90 bp AGCCCCATGTTGCTCTCTGGTACACAAATTCAGAAATGGGAGGTAGGTAAAGTGCCCTTTCCCTGGCTCTaGTTGGACAGCAATCTAATA +
Preference number: 4 (lower is better)
Translates to: SPMLLSGTQIQKWEVGKVPFPWL*LDSNLI
Trigger: TATTAGATTGCTGTCCAATCAGAGCCAGGGAAAGGG...CACTTTACCTACCTCCCATTTCTGAATTTGTGTACCAGAGAGCAACATGGGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR GCA 90 bp ATATCTGTGGCTGGAATGGTTTCTGCTGCACAGCATTGCCAACTAATGGCTCTGGTCTCCTTTTCCATCTaGCAATATCAGACTGCCTGT +
Preference number: 4 (lower is better)
Translates to: ISVAGMVSAAQHCQLMALVSFSI*QYQTAC
Trigger: ACAGGCAGTCTGATATTGGCAGATGGAAAAGGAGAC...CAGAGCCATTAGTTGGCAATGCTGTGCAGCAGAAACCATTCCAGCCACAGATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR CCA 90 bp AGGTTGATCTTGCTTTTCCTGAGGCACCAGGACTCTTCACTGTTATGTAAAGAATCATCGTCAAGTTTCTaGGAAGGGAGTCCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: RLILLFLRHQDSSLLCKESSSSF*EGSPLQ
Trigger: CTGGAGGGGACTCCCTTCCCAGAAACTTGACGATGA...TTCTTTACATAACAGTGAAGAGTCCTGGTGCCTCAGGAAAAGCAAGATCAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440615.6
CDS-3UTR CCA 90 bp ATATCTGTGGCTGGAATGGTTTCTGCTGCACAGCATTGCCAACTAATGGCTCTGGGGTTTGCTGTGATATaGCACTTCAGGTCTCCTTTT +
Preference number: 4 (lower is better)
Translates to: ISVAGMVSAAQHCQLMALGFAVI*HFRSPF
Trigger: AAAAGGAGACCTGAAGTGCCATATCACAGCAAACCC...CAGAGCCATTAGTTGGCAATGCTGTGCAGCAGAAACCATTCCAGCCACAGATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR CCA 90 bp ATATCTGTGGCTGGAATGGTTTCTGCTGCACAGCATTGCCAACTAATGGCTCTGCATCCTCTTGGGGTTTaGGAATCTGTTTTTGTCCCA +
Preference number: 4 (lower is better)
Translates to: ISVAGMVSAAQHCQLMALHPLGV*ESVFVP
Trigger: TGGGACAAAAACAGATTCCCAAACCCCAAGAGGATG...CAGAGCCATTAGTTGGCAATGCTGTGCAGCAGAAACCATTCCAGCCACAGATAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR CCA 90 bp AGGCTGTCTCCACTTGTCTCTAGCCAAATGTTTCAATATAGATTTGGGTCAAAAAGGGCTCTCGTCGCTTaGTGTTCATGGTGGCATGGC +
Preference number: 4 (lower is better)
Translates to: RLSPLVSSQMFQYRFGSKRALVA*CSWWHG
Trigger: GCCATGCCACCATGAACACCAAGCGACGAGAGCCCT...TTTTGACCCAAATCTATATTGAAACATTTGGCTAGAGACAAGTGGAGACAGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR CCA 90 bp TTCAACTCCCAGTGTTTATGTGCTTTGACTGTGTTTCTGCTGCTTATCATTTTGGGCCTCATGACAGGTTaGGAAGCCACGTGTGCATGG +
Preference number: 4 (lower is better)
Translates to: FNSQCLCALTVFLLLIILGLMTG*EATCAW
Trigger: CCATGCACACGTGGCTTCCCAACCTGTCATGAGGCC...CAAAATGATAAGCAGCAGAAACACAGTCAAAGCACATAAACACTGGGAGTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR CCA 90 bp ATCTCGGTTACTCAGGATGCTGAGGCAGAAGAATCGCTTGAACCCGGAAAGCAGTACAGTTGTCTTTATTaGTATCACACTTCCACCTCG +
Preference number: 4 (lower is better)
Translates to: ISVTQDAEAEESLEPGKQYSCLY*YHTSTS
Trigger: CGAGGTGGAAGTGTGATACCAATAAAGACAACTGTA...CTGCTTTCCGGGTTCAAGCGATTCTTCTGCCTCAGCATCCTGAGTAACCGAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR CCA 90 bp AGAATGCTAGCTATATGGCCTCCATTGTCAGTGGCTAATATGATAGCCTGTTTCTACCGTCGGCCTGGGTaGAAACAACTGTCAAGAAGC +
Preference number: 4 (lower is better)
Translates to: RMLAIWPPLSVANMIACFYRRPG*KQLSRS
Trigger: GCTTCTTGACAGTTGTTTCCACCCAGGCCGACGGTA...GAAACAGGCTATCATATTAGCCACTGACAATGGAGGCCATATAGCTAGCATTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR CCA 90 bp CCCTTCGAGGGTTTGGTAGGTGGAAATCCTAGGAATCTCATTACTAAGGCTTTCTCAATGGCACAGCTGTaGAAACCAATGCTATCAGGG +
Preference number: 4 (lower is better)
Translates to: PFEGLVGGNPRNLITKAFSMAQL*KPMLSG
Trigger: CCCTGATAGCATTGGTTTCCACAGCTGTGCCATTGA...GAAAGCCTTAGTAATGAGATTCCTAGGATTTCCACCTACCAAACCCTCGAAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR CCA 90 bp CTGAATCCAATAATGCCTGATAGGTGGACTTCTTGGAAAGCCACTGTTTCTGACTTAGCTGCCTGTTCCTaGCCATTTCTGCAGACACAG +
Preference number: 4 (lower is better)
Translates to: LNPIMPDRWTSWKATVSDLAACS*PFLQTQ
Trigger: CTGTGTCTGCAGAAATGGCCAGGAACAGGCAGCTAA...GTCAGAAACAGTGGCTTTCCAAGAAGTCCACCTATCAGGCATTATTGGATTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570013.5
CDS-3UTR CCA 90 bp ATGGTGGTAGAAATAGCTTTGTCTATGTCTTCAAGCATAGTGTTGATCACAATTCTGGCAACCTCACGCTaGGCACTGGCCTGTTCCCCA +
Preference number: 4 (lower is better)
Translates to: MVVEIALSMSSSIVLITILATSR*ALACSP
Trigger: TGGGGAACAGGCCAGTGCCCAGCGTGAGGTTGCCAG...AATTGTGATCAACACTATGCTTGAAGACATAGACAAAGCTATTTCTACCACCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440615.6
CDS-3UTR CCA 90 bp ACAAGCTCAGATAGAAATCCCCACTATACGCACAAAGCTGGATTCAAATTATTCCTACTAGACGCCACTTaGGCAGCCAGGCTTAGGGCT +
Preference number: 4 (lower is better)
Translates to: TSSDRNPHYTHKAGFKLFLLDAT*AARLRA
Trigger: AGCCCTAAGCCTGGCTGCCCAAGTGGCGTCTAGTAG...GAATAATTTGAATCCAGCTTTGTGCGTATAGTGGGGATTTCTATCTGAGCTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566442.5
CDS-3UTR TCA 90 bp AAGCCACTGTTTCTGACGCCAGGCATTCACTGTAGACTTCCCTCTAGATACCTGTGTCTTCATCTGTTGTaGCTGAATCCAATAATGCCT +
Preference number: 4 (lower is better)
Translates to: KPLFLTPGIHCRLPSRYLCLHLL*LNPIMP
Trigger: AGGCATTATTGGATTCAGTCACAACAGATGAAGACA...CAGGTATCTAGAGGGAAGTCTACAGTGAATGCCTGGCGTCAGAAACAGTGGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567784.5
ENST00000570013.5
CDS-3UTR TCA 90 bp CAAAGGGCAGATAATGAACACATAAACAACTGCACATTTCAATTCCCAGAAGCCCTGCAGGCTCTGTATTaGTCTCCACCAGTGTTTCCG +
Preference number: 4 (lower is better)
Translates to: QRADNEHINNCTFQFPEALQALY*SPPVFP
Trigger: CGGAAACACTGGTGGAGATCAATACAGAGCCTGCAG...GGCTTCTGGGAATTGAAATGTGCAGTTGTTTATGTGTTCATTATCTGCCCTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR TCA 90 bp CCCTTCGAGGGTTTGGTAGGTGGAAATCCTAGGAATCTCATTACTAAGGCTTTCTGTGCCTGTAAGGTGTaGGTACTGTTTGAAGACATC +
Preference number: 4 (lower is better)
Translates to: PFEGLVGGNPRNLITKAFCACKV*VLFEDI
Trigger: GATGTCTTCAAACAGTACTCACACCTTACAGGCACA...GAAAGCCTTAGTAATGAGATTCCTAGGATTTCCACCTACCAAACCCTCGAAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR TCA 90 bp TGGTGCAGAGCTCAAATCTCAACTCATACTATGAAATGTGTCCACAAGGAAATGAGTCAGTGGCAATGTTaGGTGAGAGCTTCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: WCRAQISTHTMKCVHKEMSQWQC*VRASPG
Trigger: GCCTGGAGAAGCTCTCACTCAACATTGCCACTGACT...CATTTCCTTGTGGACACATTTCATAGTATGAGTTGAGATTTGAGCTCTGCACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR TCA 90 bp ATCTCGGTTACTCAGGATGCTGAGGCAGAAGAATCGCTTGAACCCGGAAAGCAGTCTCAACTCATACTATaGAATGTGTCCACAAGGAAA +
Preference number: 4 (lower is better)
Translates to: ISVTQDAEAEESLEPGKQSQLIL*NVSTRK
Trigger: TTTCCTTGTGGACACATTTCATAGTATGAGTTGAGA...CTGCTTTCCGGGTTCAAGCGATTCTTCTGCCTCAGCATCCTGAGTAACCGAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR TCA 90 bp AGAATGCTAGCTATATGGCCTCCATTGTCAGTGGCTAATATGATAGCCTGTTTCCTGTGCAGGTCTCTGTaGGCTTACATATGGTGCAGA +
Preference number: 4 (lower is better)
Translates to: RMLAIWPPLSVANMIACFLCRSL*AYIWCR
Trigger: TCTGCACCATATGTAAGCTCACAGAGACCTGCACAG...GAAACAGGCTATCATATTAGCCACTGACAATGGAGGCCATATAGCTAGCATTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR TCA 90 bp AAATTAGCTGCCTGTTCCTGGCCATTTCTGCAGACACAGTACTGGCTAATAAGCAAGTGTTGTCTCTGGTaGAACCTTGCAAACAGGCTT +
Preference number: 4 (lower is better)
Translates to: KLAACSWPFLQTQYWLISKCCLW*NLANRL
Trigger: AAGCCTGTTTGCAAGGTTTCACCAGAGACAACACTT...GCTTATTAGCCAGTACTGTGTCTGCAGAAATGGCCAGGAACAGGCAGCTAATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570013.5
CDS-3UTR GCA 90 bp CCCTTCGAGGGTTTGGTAGGTGGAAATCCTAGGAATCTCATTACTAAGGCTTTCCAGTGTGTACTCTACTaGAGGCTCTGTATTGATCTC +
Preference number: 4 (lower is better)
Translates to: PFEGLVGGNPRNLITKAFQCVLY*RLCIDL
Trigger: GAGATCAATACAGAGCCTGCAGTAGAGTACACACTG...GAAAGCCTTAGTAATGAGATTCCTAGGATTTCCACCTACCAAACCCTCGAAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR GCA 90 bp AGCCCCATGTTGCTCTCTGGTACACAAATTCAGAAATGGGAGGTAGGTAAAGTGTTGGGAAGCCACGTGTaGATGGTAGAACAGAGAATA +
Preference number: 4 (lower is better)
Translates to: SPMLLSGTQIQKWEVGKVLGSHV*MVEQRI
Trigger: TATTCTCTGTTCTACCATGCACACGTGGCTTCCCAA...CACTTTACCTACCTCCCATTTCTGAATTTGTGTACCAGAGAGCAACATGGGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR GCA 90 bp TTCAACTCCCAGTGTTTATGTGCTTTGACTGTGTTTCTGCTGCTTATCATTTTGCTGCAGCGTATGCAGTaGACACAGAAGAGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: FNSQCLCALTVFLLLIILLQRMQ*TQKRAA
Trigger: AGCAGCCCTCTTCTGTGTGCACTGCATACGCTGCAG...CAAAATGATAAGCAGCAGAAACACAGTCAAAGCACATAAACACTGGGAGTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR GCA 90 bp AGAATGCTAGCTATATGGCCTCCATTGTCAGTGGCTAATATGATAGCCTGTTTCCCCAGAGAGGTCAAATaGCATGGCCAAGATCACTCA +
Preference number: 4 (lower is better)
Translates to: RMLAIWPPLSVANMIACFPREVK*HGQDHS
Trigger: TGAGTGATCTTGGCCATGGCATTTGACCTCTCTGGG...GAAACAGGCTATCATATTAGCCACTGACAATGGAGGCCATATAGCTAGCATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR GCA 90 bp ACAAGCTCAGATAGAAATCCCCACTATACGCACAAAGCTGGATTCAAATTATTCCCTGCACGGGGTGCCTaGCTGGTCCTAAAACCTTTA +
Preference number: 4 (lower is better)
Translates to: TSSDRNPHYTHKAGFKLFPARGA*LVLKPL
Trigger: TAAAGGTTTTAGGACCAGGCAGGCACCCCGTGCAGG...GAATAATTTGAATCCAGCTTTGTGCGTATAGTGGGGATTTCTATCTGAGCTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000566442.5
CDS-3UTR GCA 90 bp ACAAGCTCAGATAGAAATCCCCACTATACGCACAAAGCTGGATTCAAATTATTCAAATCCTGCACGGGGTaGCTGCCTGGTCCTAAAACC +
Preference number: 4 (lower is better)
Translates to: TSSDRNPHYTHKAGFKLFKSCTG*LPGPKT
Trigger: GGTTTTAGGACCAGGCAGGCACCCCGTGCAGGATTT...GAATAATTTGAATCCAGCTTTGTGCGTATAGTGGGGATTTCTATCTGAGCTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000566442.5
CDS-3UTR GCA 90 bp AGGGGTAACTTCACAGAGGTGCTCAGAGATATTCCTGCATCCTCGGAGAAGCTGGCAAACAGGCTTACTTaGTTCATTGATGATTTGGAA +
Preference number: 4 (lower is better)
Translates to: RGNFTEVLRDIPASSEKLANRLT*FIDDLE
Trigger: TTCCAAATCATCAATGAAGCAAGTAAGCCTGTTTGC...CAGCTTCTCCGAGGATGCAGGAATATCTCTGAGCACCTCTGTGAAGTTACCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570013.5
CDS-3UTR CCA 90 bp CTTGGTAGGTTGATCTTGCTTTTCCTGAGGCACCAGGACTCTTCACTGTTATGTGATAGGTGGACTTCTTaGAAAGCCACTGTTTCTGAC +
Preference number: 4 (lower is better)
Translates to: LGRLILLFLRHQDSSLLCDRWTS*KATVSD
Trigger: GTCAGAAACAGTGGCTTTCCAAGAAGTCCACCTATC...ACATAACAGTGAAGAGTCCTGGTGCCTCAGGAAAAGCAAGATCAACCTACCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440615.6
CDS-3UTR CCA 90 bp CTGTTTCTGACGCCAGGCATTCACTGTAGACTTCCCTCTAGATACCTGTTCAGAATAATGCCTGATAGGTaGACTTCTTGGAAAGCCACT +
Preference number: 4 (lower is better)
Translates to: LFLTPGIHCRLPSRYLFRIMPDR*TSWKAT
Trigger: AGTGGCTTTCCAAGAAGTCCACCTATCAGGCATTAT...TCTGAACAGGTATCTAGAGGGAAGTCTACAGTGAATGCCTGGCGTCAGAAACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567784.5
ENST00000570013.5
CDS-3UTR CCA 90 bp ATCTCGGTTACTCAGGATGCTGAGGCAGAAGAATCGCTTGAACCCGGAAAGCAGAATTGCCATGATGAATaGCATTCTTCTGCATGGTTT +
Preference number: 4 (lower is better)
Translates to: ISVTQDAEAEESLEPGKQNCHDE*HSSAWF
Trigger: AAACCATGCAGAAGAATGCCATTCATCATGGCAATT...CTGCTTTCCGGGTTCAAGCGATTCTTCTGCCTCAGCATCCTGAGTAACCGAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR CCA 90 bp CAAAGGGCAGATAATGAACACATAAACAACTGCACATTTCAATTCCCAGAAGCCCCACCACACACTTGCTaGGATAATGACCCCTCTGGT +
Preference number: 4 (lower is better)
Translates to: QRADNEHINNCTFQFPEAPPHTC*DNDPSG
Trigger: ACCAGAGGGGTCATTATCCCAGCAAGTGTGTGGTGG...GGCTTCTGGGAATTGAAATGTGCAGTTGTTTATGTGTTCATTATCTGCCCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR CCA 90 bp TTTCTGCAGACACAGTACTGGCTAATAAGCGGTAGTTGTGCCTTATCTGCTGAGGAGAAGGTGGCTGGTTaGGCAAAGCTTCATTTTCAT +
Preference number: 4 (lower is better)
Translates to: FLQTQYWLISGSCALSAEEKVAG*AKLHFH
Trigger: ATGAAAATGAAGCTTTGCCCAACCAGCCACCTTCTC...CTCAGCAGATAAGGCACAACTACCGCTTATTAGCCAGTACTGTGTCTGCAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570013.5
CDS-3UTR CCA 90 bp CTTGGTAGGTTGATCTTGCTTTTCCTGAGGCACCAGGACTCTTCACTGTTATGTCTGCAGACACAGTACTaGCTAATAAGCGGTAGTTGT +
Preference number: 4 (lower is better)
Translates to: LGRLILLFLRHQDSSLLCLQTQY*LISGSC
Trigger: ACAACTACCGCTTATTAGCCAGTACTGTGTCTGCAG...ACATAACAGTGAAGAGTCCTGGTGCCTCAGGAAAAGCAAGATCAACCTACCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440615.6
CDS-3UTR CCA 90 bp TCATTAGGCTTAGATGAAGAGGCAAGGGGTAACTTCACAGAGGTGCTCAGAGATGTGCTTCTGATTGTCTaGCCAGTTCCCAAATTAGCT +
Preference number: 4 (lower is better)
Translates to: SLGLDEEARGNFTEVLRDVLLIV*PVPKLA
Trigger: AGCTAATTTGGGAACTGGCCAGACAATCAGAAGCAC...ATCTCTGAGCACCTCTGTGAAGTTACCCCTTGCCTCTTCATCTAAGCCTAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570013.5
CDS-3UTR TCA 90 bp ACAAGCTCAGATAGAAATCCCCACTATACGCACAAAGCTGGATTCAAATTATTCCTGCAGGCTCTGTATTaGTCTCCACCAGTGTTTCCG +
Preference number: 4 (lower is better)
Translates to: TSSDRNPHYTHKAGFKLFLQALY*SPPVFP
Trigger: CGGAAACACTGGTGGAGATCAATACAGAGCCTGCAG...GAATAATTTGAATCCAGCTTTGTGCGTATAGTGGGGATTTCTATCTGAGCTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566442.5
CDS-3UTR TCA 90 bp AGCCCCATGTTGCTCTCTGGTACACAAATTCAGAAATGGGAGGTAGGTAAAGTGGGCCTTCACATATACTaGGTAGTCAGGATCAATCTT +
Preference number: 4 (lower is better)
Translates to: SPMLLSGTQIQKWEVGKVGLHIY*VVRINL
Trigger: AAGATTGATCCTGACTACTCAGTATATGTGAAGGCC...CACTTTACCTACCTCCCATTTCTGAATTTGTGTACCAGAGAGCAACATGGGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR TCA 90 bp AGCCCCATGTTGCTCTCTGGTACACAAATTCAGAAATGGGAGGTAGGTAAAGTGTTCACAAAGAAGCCCTaGTCTTTGGCCTTCACATAT +
Preference number: 4 (lower is better)
Translates to: SPMLLSGTQIQKWEVGKVFTKKP*SLAFTY
Trigger: ATATGTGAAGGCCAAAGATCAGGGCTTCTTTGTGAA...CACTTTACCTACCTCCCATTTCTGAATTTGTGTACCAGAGAGCAACATGGGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR TCA 90 bp TTCAACTCCCAGTGTTTATGTGCTTTGACTGTGTTTCTGCTGCTTATCATTTTGTCTCTGGATTCCCAATaGACCCGCCTATGTCAGCTC +
Preference number: 4 (lower is better)
Translates to: FNSQCLCALTVFLLLIILSLDSQ*TRLCQL
Trigger: GAGCTGACATAGGCGGGTTCATTGGGAATCCAGAGA...CAAAATGATAAGCAGCAGAAACACAGTCAAAGCACATAAACACTGGGAGTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR TCA 90 bp TACCTCTCATTCATTAAGTGCCTACTGGGAGCTAGCCACTTCACAGAGACCTTTTGGCTTTTGGTTCTGTaGCTGGATGAACCAATAATG +
Preference number: 4 (lower is better)
Translates to: YLSFIKCLLGASHFTETFWLLVL*LDEPIM
Trigger: CATTATTGGTTCATCCAGTCACAGAACCAAAAGCCA...AAAGGTCTCTGTGAAGTGGCTAGCTCCCAGTAGGCACTTAATGAATGAGAGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR TCA 90 bp CAAAGGGCAGATAATGAACACATAAACAACTGCACATTTCAATTCCCAGAAGCCACACTTCCACCTCGCTaGAACACTGGAATAGTGTCC +
Preference number: 4 (lower is better)
Translates to: QRADNEHINNCTFQFPEATLPPR*NTGIVS
Trigger: GGACACTATTCCAGTGTTTCAGCGAGGTGGAAGTGT...GGCTTCTGGGAATTGAAATGTGCAGTTGTTTATGTGTTCATTATCTGCCCTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR TCA 90 bp TACCTCTCATTCATTAAGTGCCTACTGGGAGCTAGCCACTTCACAGAGACCTTTATCTTTACCATCAGATaGGTGGGTAGTCACAGAAGA +
Preference number: 4 (lower is better)
Translates to: YLSFIKCLLGASHFTETFIFTIR*VGSHRR
Trigger: TCTTCTGTGACTACCCACTCATCTGATGGTAAAGAT...AAAGGTCTCTGTGAAGTGGCTAGCTCCCAGTAGGCACTTAATGAATGAGAGGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR TCA 90 bp CCTGTAGGCCAACTCAGCCCCATGTTGCTCTCTGGTACACAAATTCAGAAATGGGAAAACATTAAGGTATaGTCCCTGAGAATGCTAAGT +
Preference number: 4 (lower is better)
Translates to: PVGQLSPMLLSGTQIQKWENIKV*SLRMLS
Trigger: ACTTAGCATTCTCAGGGATCATACCTTAATGTTTTC...CCATTTCTGAATTTGTGTACCAGAGAGCAACATGGGGCTGAGTTGGCCTACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR TCA 90 bp AGCCCCATGTTGCTCTCTGGTACACAAATTCAGAAATGGGAGGTAGGTAAAGTGGGAAATGCACAATGTTaGTTGCCTTTGGGAAGAATC +
Preference number: 4 (lower is better)
Translates to: SPMLLSGTQIQKWEVGKVGNAQC*LPLGRI
Trigger: GATTCTTCCCAAAGGCAATCAACATTGTGCATTTCC...CACTTTACCTACCTCCCATTTCTGAATTTGTGTACCAGAGAGCAACATGGGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR TCA 90 bp CCCTTCGAGGGTTTGGTAGGTGGAAATCCTAGGAATCTCATTACTAAGGCTTTCATCACTTGCCTAAAGTaGTGTTTACTGGGTTTCTCC +
Preference number: 4 (lower is better)
Translates to: PFEGLVGGNPRNLITKAFITCLK*CLLGFS
Trigger: GGAGAAACCCAGTAAACATCACTTTAGGCAAGTGAT...GAAAGCCTTAGTAATGAGATTCCTAGGATTTCCACCTACCAAACCCTCGAAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR TCA 90 bp AGGTTGATCTTGCTTTTCCTGAGGCACCAGGACTCTTCACTGTTATGTAAAGAAAAGTGTTGTCTCTGGTaGAACCTTGCAAACAGGCTG +
Preference number: 4 (lower is better)
Translates to: RLILLFLRHQDSSLLCKEKCCLW*NLANRL
Trigger: CAGCCTGTTTGCAAGGTTTCACCAGAGACAACACTT...TTCTTTACATAACAGTGAAGAGTCCTGGTGCCTCAGGAAAAGCAAGATCAACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440615.6
CDS-3UTR TCA 90 bp ATGGTGGTAGAAATAGCTTTGTCTATGTCTTCAAGCATAGTGTTGATCACAATTCACCTCTACCAGCTGTaGTCAAGACCTCCCGGGATC +
Preference number: 4 (lower is better)
Translates to: MVVEIALSMSSSIVLITIHLYQL*SRPPGI
Trigger: GATCCCGGGAGGTCTTGATCACAGCTGGTAGAGGTG...AATTGTGATCAACACTATGCTTGAAGACATAGACAAAGCTATTTCTACCACCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440615.6
CDS-3UTR GCA 90 bp TACCTCTCATTCATTAAGTGCCTACTGGGAGCTAGCCACTTCACAGAGACCTTTCTGACGCCTGTAAAATaGGATCTTGTTACAGTCTCT +
Preference number: 4 (lower is better)
Translates to: YLSFIKCLLGASHFTETFLTPVK*DLVTVS
Trigger: AGAGACTGTAACAAGATCGCATTTTACAGGCGTCAG...AAAGGTCTCTGTGAAGTGGCTAGCTCCCAGTAGGCACTTAATGAATGAGAGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR GCA 90 bp TTCAACTCCCAGTGTTTATGTGCTTTGACTGTGTTTCTGCTGCTTATCATTTTGCTGCCAATATCAGACTaGCTGTGTCCCCAGAGCATG +
Preference number: 4 (lower is better)
Translates to: FNSQCLCALTVFLLLIILLPISD*LCPQSM
Trigger: CATGCTCTGGGGACACAGGCAGTCTGATATTGGCAG...CAAAATGATAAGCAGCAGAAACACAGTCAAAGCACATAAACACTGGGAGTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR GCA 90 bp ACAAGCTCAGATAGAAATCCCCACTATACGCACAAAGCTGGATTCAAATTATTCCTGCCAATATCAGACTaGCTGTGTCCCCAGAGCATG +
Preference number: 4 (lower is better)
Translates to: TSSDRNPHYTHKAGFKLFLPISD*LCPQSM
Trigger: CATGCTCTGGGGACACAGGCAGTCTGATATTGGCAG...GAATAATTTGAATCCAGCTTTGTGCGTATAGTGGGGATTTCTATCTGAGCTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566442.5
CDS-3UTR GCA 90 bp ATATCTGTGGCTGGAATGGTTTCTGCTGCACAGCATTGCCAACTAATGGCTCTGGTGTCCACAAGGAAATaGACAATGTTGATTGCCTTT +
Preference number: 4 (lower is better)
Translates to: ISVAGMVSAAQHCQLMALVSTRK*TMLIAF
Trigger: AAAGGCAATCAACATTGTGCATTTCCTTGTGGACAC...CAGAGCCATTAGTTGGCAATGCTGTGCAGCAGAAACCATTCCAGCCACAGATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR GCA 90 bp TTGCTTTTCCTGAGGCACCAGGACTCTTCACTGTTATGTAAAGAACTGTTAACCTCTCTGGTGAAACCTTaGAAACAGGCTGAGCATGGA +
Preference number: 4 (lower is better)
Translates to: LLFLRHQDSSLLCKELLTSLVKP*KQAEHG
Trigger: TCCATGCTCAGCCTGTTTGCAAGGTTTCACCAGAGA...GGTTAACAGTTCTTTACATAACAGTGAAGAGTCCTGGTGCCTCAGGAAAAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440615.6
CDS-3UTR CCA 90 bp ACAAGCTCAGATAGAAATCCCCACTATACGCACAAAGCTGGATTCAAATTATTCTCATCGTCAAGTTTCTaGGAAGGGAGTCCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: TSSDRNPHYTHKAGFKLFSSSSF*EGSPLQ
Trigger: CTGGAGGGGACTCCCTTCCCAGAAACTTGACGATGA...GAATAATTTGAATCCAGCTTTGTGCGTATAGTGGGGATTTCTATCTGAGCTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566442.5
CDS-3UTR CCA 90 bp GCAAACAGGCTTACTTGCTTCATTGATGATTTGGAACCTGGTGCTGTCTTCATCGATAGGTGGACTTCTTaGAAAGCCACTGTTTCTGAC +
Preference number: 4 (lower is better)
Translates to: ANRLTCFIDDLEPGAVFIDRWTS*KATVSD
Trigger: GTCAGAAACAGTGGCTTTCCAAGAAGTCCACCTATC...GATGAAGACAGCACCAGGTTCCAAATCATCAATGAAGCAAGTAAGCCTGTTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570013.5
CDS-3UTR CCA 90 bp TACCTCTCATTCATTAAGTGCCTACTGGGAGCTAGCCACTTCACAGAGACCTTTCCGGAACTTCAAATCTaGGTTTTAGAGGAGTCTCTT +
Preference number: 4 (lower is better)
Translates to: YLSFIKCLLGASHFTETFPELQI*VLEESL
Trigger: AAGAGACTCCTCTAAAACCCAGATTTGAAGTTCCGG...AAAGGTCTCTGTGAAGTGGCTAGCTCCCAGTAGGCACTTAATGAATGAGAGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR CCA 90 bp ACAAGCTCAGATAGAAATCCCCACTATACGCACAAAGCTGGATTCAAATTATTCGCAACTGGGCCCATCTaGGTCAGTGTGTACTCTACT +
Preference number: 4 (lower is better)
Translates to: TSSDRNPHYTHKAGFKLFATGPI*VSVYST
Trigger: AGTAGAGTACACACTGACCCAGATGGGCCCAGTTGC...GAATAATTTGAATCCAGCTTTGTGCGTATAGTGGGGATTTCTATCTGAGCTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566442.5
CDS-3UTR CCA 90 bp GACAAAGTGAAGGAATTCTGCACACAGACCAAACTCCAGAATTGTATTTTTCTTTCTGCCCAGTCCATGTaGGTGGAAGATAACTGGGGG +
Preference number: 4 (lower is better)
Translates to: DKVKEFCTQTKLQNCIFLSAQSM*VEDNWG
Trigger: CCCCCAGTTATCTTCCACCCACATGGACTGGGCAGA...AAGAAAAATACAATTCTGGAGTTTGGTCTGTGTGCAGAATTCCTTCACTTTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR CCA 90 bp TACCTCTCATTCATTAAGTGCCTACTGGGAGCTAGCCACTTCACAGAGACCTTTAGCCATATTAGAGCCTaGGACAAAAGGAAAACTCAG +
Preference number: 4 (lower is better)
Translates to: YLSFIKCLLGASHFTETFSHIRA*DKRKTQ
Trigger: CTGAGTTTTCCTTTTGTCCCAGGCTCTAATATGGCT...AAAGGTCTCTGTGAAGTGGCTAGCTCCCAGTAGGCACTTAATGAATGAGAGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR CCA 90 bp TGGTGCAGAGCTCAAATCTCAACTCATACTATGAAATGTGTCCACAAGGAAATGAGAGGTCAAATGCCATaGCCAAGATCACTCAGCCAG +
Preference number: 4 (lower is better)
Translates to: WCRAQISTHTMKCVHKEMRGQMP*PRSLSQ
Trigger: CTGGCTGAGTGATCTTGGCCATGGCATTTGACCTCT...CATTTCCTTGTGGACACATTTCATAGTATGAGTTGAGATTTGAGCTCTGCACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
3UTR CAA 72 bp AAAGTAACAATACCTGTAGGCCAACTCAGCCCCATGTaGCTCTCTGGTACACAAATTCAGAAATGGGAGGTA +
Preference number: 4 (lower is better)
Translates to: KVTIPVGQLSPM*LSGTQIQKWEV
Trigger: TACCTCCCATTTCTGAATTTGTGTACCAGAGAGCAACATGGGGCTGAGTTGGCCTACAGGTATTGTTACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
3UTR CAA 72 bp GCTATTTCTCCTAGAATGCTAGCTATATGGCCTCCATaGTCAGTGGCTAATATGATAGCCTGTTTCCAGTGG +
Preference number: 4 (lower is better)
Translates to: AISPRMLAIWPP*SVANMIACFQW
Trigger: CCACTGGAAACAGGCTATCATATTAGCCACTGACAATGGAGGCCATATAGCTAGCATTCTAGGAGAAATAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
3UTR CAA 72 bp GATAGTGTCCTCCAGTCTCTGATCATTCCACAGTCTTaGTCTCTCATGACCGTGACACTTTTGAAGAGTACT +
Preference number: 4 (lower is better)
Translates to: DSVLQSLIIPQS*SLMTVTLLKST
Trigger: AGTACTCTTCAAAAGTGTCACGGTCATGAGAGACAAAGACTGTGGAATGATCAGAGACTGGAGGACACTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR TCA 90 bp TATCTGCTGAGAAGGTGGCTGGTTGGGCAAAGCTTCATTTTCATTAGGCTTAGATGGAGTGACAAATCTTaGCTCTTGCTCCTGGAATTT +
Preference number: 4 (lower is better)
Translates to: YLLRRWLVGQSFIFIRLRWSDKS*LLLLEF
Trigger: AAATTCCAGGAGCAAGAGTCAAGATTTGTCACTCCA...TCTAAGCCTAATGAAAATGAAGCTTTGCCCAACCAGCCACCTTCTCAGCAGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570013.5
CDS-3UTR TCA 90 bp ACAAGCTCAGATAGAAATCCCCACTATACGCACAAAGCTGGATTCAAATTATTCTGCTTGGCTTGCTTGTaGGGACATCCGGAACTTCAA +
Preference number: 4 (lower is better)
Translates to: TSSDRNPHYTHKAGFKLFCLACL*GHPELQ
Trigger: TTGAAGTTCCGGATGTCCTCACAAGCAAGCCAAGCA...GAATAATTTGAATCCAGCTTTGTGCGTATAGTGGGGATTTCTATCTGAGCTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566442.5
CDS-3UTR TCA 90 bp ACAAGCTCAGATAGAAATCCCCACTATACGCACAAAGCTGGATTCAAATTATTCTGTGTCCCCAGAGCATaGAATCAGCCTTACAGTGCT +
Preference number: 4 (lower is better)
Translates to: TSSDRNPHYTHKAGFKLFCVPRA*NQPYSA
Trigger: AGCACTGTAAGGCTGATTTCATGCTCTGGGGACACA...GAATAATTTGAATCCAGCTTTGTGCGTATAGTGGGGATTTCTATCTGAGCTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566442.5
CDS-3UTR TCA 90 bp ACAAGCTCAGATAGAAATCCCCACTATACGCACAAAGCTGGATTCAAATTATTCCTGAGAGGTGTCCACTaGTGTCTCCTCCTCATTTTC +
Preference number: 4 (lower is better)
Translates to: TSSDRNPHYTHKAGFKLFLRGVH*CLLLIF
Trigger: GAAAATGAGGAGGAGACATCAGTGGACACCTCTCAG...GAATAATTTGAATCCAGCTTTGTGCGTATAGTGGGGATTTCTATCTGAGCTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566442.5
CDS-3UTR TCA 90 bp TACCTCTCATTCATTAAGTGCCTACTGGGAGCTAGCCACTTCACAGAGACCTTTCAGGAGATAAGGTACTaGACCATAAATGCCCATTTT +
Preference number: 4 (lower is better)
Translates to: YLSFIKCLLGASHFTETFQEIRY*TINAHF
Trigger: AAAATGGGCATTTATGGTTCAGTACCTTATCTCCTG...AAAGGTCTCTGTGAAGTGGCTAGCTCCCAGTAGGCACTTAATGAATGAGAGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR TCA 90 bp AGGCTGTCTCCACTTGTCTCTAGCCAAATGTTTCAATATAGATTTGGGTCAAAAGACATCCAGTGCACATaGGTGCGAGATCTGACCTTT +
Preference number: 4 (lower is better)
Translates to: RLSPLVSSQMFQYRFGSKDIQCT*VRDLTF
Trigger: AAAGGTCAGATCTCGCACTCATGTGCACTGGATGTC...TTTTGACCCAAATCTATATTGAAACATTTGGCTAGAGACAAGTGGAGACAGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR TCA 90 bp ACAAGCTCAGATAGAAATCCCCACTATACGCACAAAGCTGGATTCAAATTATTCGACATCCAGTGCACATaGGTGCGAGATCTGACCTTT +
Preference number: 4 (lower is better)
Translates to: TSSDRNPHYTHKAGFKLFDIQCT*VRDLTF
Trigger: AAAGGTCAGATCTCGCACTCATGTGCACTGGATGTC...GAATAATTTGAATCCAGCTTTGTGCGTATAGTGGGGATTTCTATCTGAGCTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566442.5
CDS-3UTR TCA 90 bp TGGTGCAGAGCTCAAATCTCAACTCATACTATGAAATGTGTCCACAAGGAAATGAATGATGCCACTCTCTaGCATCCAGTGCACATGAGT +
Preference number: 4 (lower is better)
Translates to: WCRAQISTHTMKCVHKEMNDATL*HPVHMS
Trigger: ACTCATGTGCACTGGATGTCAGAGAGTGGCATCATT...CATTTCCTTGTGGACACATTTCATAGTATGAGTTGAGATTTGAGCTCTGCACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR TCA 90 bp TTCAACTCCCAGTGTTTATGTGCTTTGACTGTGTTTCTGCTGCTTATCATTTTGTACGCTTTTTGCTCCTaGGCAGCTCTTGCATCCTCT +
Preference number: 4 (lower is better)
Translates to: FNSQCLCALTVFLLLIILYAFCS*AALASS
Trigger: AGAGGATGCAAGAGCTGCTCAGGAGCAAAAAGCGTA...CAAAATGATAAGCAGCAGAAACACAGTCAAAGCACATAAACACTGGGAGTTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR TCA 90 bp TACCTCTCATTCATTAAGTGCCTACTGGGAGCTAGCCACTTCACAGAGACCTTTAACAGAACATGCTCTTaGGGGACATACAATCTAGTA +
Preference number: 4 (lower is better)
Translates to: YLSFIKCLLGASHFTETFNRTCS*GTYNLV
Trigger: TACTAGATTGTATGTCCCTCAAGAGCATGTTCTGTT...AAAGGTCTCTGTGAAGTGGCTAGCTCCCAGTAGGCACTTAATGAATGAGAGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR TCA 90 bp TTGCTTTTCCTGAGGCACCAGGACTCTTCACTGTTATGTAAAGAACTGTTAACCTGGTTTCTTTGCCTTTaGAGGCATCCAGAGTTGTTG +
Preference number: 4 (lower is better)
Translates to: LLFLRHQDSSLLCKELLTWFLCL*RHPELL
Trigger: CAACAACTCTGGATGCCTTCAAAGGCAAAGAAACCA...GGTTAACAGTTCTTTACATAACAGTGAAGAGTCCTGGTGCCTCAGGAAAAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440615.6
CDS-3UTR TCA 90 bp ATGGTGGTAGAAATAGCTTTGTCTATGTCTTCAAGCATAGTGTTGATCACAATTGTCCAGGTGTGCTTCTaGTTGTCTGGCCAGTTCCCA +
Preference number: 4 (lower is better)
Translates to: MVVEIALSMSSSIVLITIVQVCF*LSGQFP
Trigger: TGGGAACTGGCCAGACAATCAGAAGCACACCTGGAC...AATTGTGATCAACACTATGCTTGAAGACATAGACAAAGCTATTTCTACCACCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440615.6
CDS-3UTR GCA 90 bp AGAATGCTAGCTATATGGCCTCCATTGTCAGTGGCTAATATGATAGCCTGTTTCATCCCATTCCAATGTTaGCAACTGTTCCAACAGAGG +
Preference number: 4 (lower is better)
Translates to: RMLAIWPPLSVANMIACFIPFQC*QLFQQR
Trigger: CCTCTGTTGGAACAGTTGGCAACATTGGAATGGGAT...GAAACAGGCTATCATATTAGCCACTGACAATGGAGGCCATATAGCTAGCATTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR GCA 90 bp TACCTCTCATTCATTAAGTGCCTACTGGGAGCTAGCCACTTCACAGAGACCTTTGACTTACAAAAGAGTTaGAAAGATAGTGTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: YLSFIKCLLGASHFTETFDLQKS*KDSVLQ
Trigger: CTGGAGGACACTATCTTTGCAACTCTTTTGTAAGTC...AAAGGTCTCTGTGAAGTGGCTAGCTCCCAGTAGGCACTTAATGAATGAGAGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR GCA 90 bp AGGTTGATCTTGCTTTTCCTGAGGCACCAGGACTCTTCACTGTTATGTAAAGAAAGTTCCCAAATTAGCTaGCTGTTCCTGGCCATTTCT +
Preference number: 4 (lower is better)
Translates to: RLILLFLRHQDSSLLCKESSQIS*LFLAIS
Trigger: AGAAATGGCCAGGAACAGGCAGCTAATTTGGGAACT...TTCTTTACATAACAGTGAAGAGTCCTGGTGCCTCAGGAAAAGCAAGATCAACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440615.6
CDS-3UTR GCA 90 bp CTGAATCCAATAATGCCTGATAGGTGGACTTCTTGGAAAGCCACTGTTTCTGACTCTCTGGTGAAACCTTaGAAACAGGCTTACTTGCTT +
Preference number: 4 (lower is better)
Translates to: LNPIMPDRWTSWKATVSDSLVKP*KQAYLL
Trigger: AAGCAAGTAAGCCTGTTTGCAAGGTTTCACCAGAGA...GTCAGAAACAGTGGCTTTCCAAGAAGTCCACCTATCAGGCATTATTGGATTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570013.5
CDS-3UTR GCA 90 bp ACAAGCTCAGATAGAAATCCCCACTATACGCACAAAGCTGGATTCAAATTATTCCCAGCCAGATTGTACTaGAGCATCGTACTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: TSSDRNPHYTHKAGFKLFPARLY*SIVLFR
Trigger: CCTGAAGAGTACGATGCTGCAGTACAATCTGGCTGG...GAATAATTTGAATCCAGCTTTGTGCGTATAGTGGGGATTTCTATCTGAGCTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566442.5
CDS-3UTR CCA 90 bp ATGATTTGGAACCTGGTGCTGTCTTCATCTGTTGTGACTGAATCCAATAATGCCCTTGACTCTTGCTCCTaGAATTTTTCAGGCCCAAAC +
Preference number: 4 (lower is better)
Translates to: MIWNLVLSSSVVTESNNALDSCS*NFSGPN
Trigger: GTTTGGGCCTGAAAAATTCCAGGAGCAAGAGTCAAG...GGCATTATTGGATTCAGTCACAACAGATGAAGACAGCACCAGGTTCCAAATCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000567784.5
ENST00000570013.5
CDS-3UTR CCA 90 bp GACAAAGTGAAGGAATTCTGCACACAGACCAAACTCCAGAATTGTATTTTTCTTTCATCGTCAAGTTTCTaGGAAGGGAGTCCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: DKVKEFCTQTKLQNCIFLSSSSF*EGSPLQ
Trigger: CTGGAGGGGACTCCCTTCCCAGAAACTTGACGATGA...AAGAAAAATACAATTCTGGAGTTTGGTCTGTGTGCAGAATTCCTTCACTTTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR CCA 90 bp ATGATTTGGAACCTGGTGCTGTCTTCATCTGTTGTGACTGAATCCAATAATGCCGATAGGTGGACTTCTTaGAAAGCCACTGTTTCTGAC +
Preference number: 4 (lower is better)
Translates to: MIWNLVLSSSVVTESNNADRWTS*KATVSD
Trigger: GTCAGAAACAGTGGCTTTCCAAGAAGTCCACCTATC...GGCATTATTGGATTCAGTCACAACAGATGAAGACAGCACCAGGTTCCAAATCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567784.5
ENST00000570013.5
CDS-3UTR CCA 90 bp CTGAATCCAATAATGCCTGATAGGTGGACTTCTTGGAAAGCCACTGTTTCTGACATAATGCCTGATAGGTaGACTTCTTGGAAAGCCACT +
Preference number: 4 (lower is better)
Translates to: LNPIMPDRWTSWKATVSDIMPDR*TSWKAT
Trigger: AGTGGCTTTCCAAGAAGTCCACCTATCAGGCATTAT...GTCAGAAACAGTGGCTTTCCAAGAAGTCCACCTATCAGGCATTATTGGATTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567784.5
ENST00000570013.5
CDS-3UTR CCA 90 bp AGGCTGTCTCCACTTGTCTCTAGCCAAATGTTTCAATATAGATTTGGGTCAAAACAGCCTTACAGTGCTTaGCTTGCTTGTGAGGACATC +
Preference number: 4 (lower is better)
Translates to: RLSPLVSSQMFQYRFGSKQPYSA*LACEDI
Trigger: GATGTCCTCACAAGCAAGCCAAGCACTGTAAGGCTG...TTTTGACCCAAATCTATATTGAAACATTTGGCTAGAGACAAGTGGAGACAGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR CCA 90 bp ACAAGCTCAGATAGAAATCCCCACTATACGCACAAAGCTGGATTCAAATTATTCCAGCCTTACAGTGCTTaGCTTGCTTGTGAGGACATC +
Preference number: 4 (lower is better)
Translates to: TSSDRNPHYTHKAGFKLFQPYSA*LACEDI
Trigger: GATGTCCTCACAAGCAAGCCAAGCACTGTAAGGCTG...GAATAATTTGAATCCAGCTTTGTGCGTATAGTGGGGATTTCTATCTGAGCTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566442.5
CDS-3UTR CCA 90 bp TTCAACTCCCAGTGTTTATGTGCTTTGACTGTGTTTCTGCTGCTTATCATTTTGTTGTTTAGCAGCAACTaGGCCCATCTGGGTCAGTGT +
Preference number: 4 (lower is better)
Translates to: FNSQCLCALTVFLLLIILLFSSN*AHLGQC
Trigger: ACACTGACCCAGATGGGCCCAGTTGCTGCTAAACAA...CAAAATGATAAGCAGCAGAAACACAGTCAAAGCACATAAACACTGGGAGTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR CCA 90 bp ACAAGCTCAGATAGAAATCCCCACTATACGCACAAAGCTGGATTCAAATTATTCTTGTTTAGCAGCAACTaGGCCCATCTGGGTCAGTGT +
Preference number: 4 (lower is better)
Translates to: TSSDRNPHYTHKAGFKLFLFSSN*AHLGQC
Trigger: ACACTGACCCAGATGGGCCCAGTTGCTGCTAAACAA...GAATAATTTGAATCCAGCTTTGTGCGTATAGTGGGGATTTCTATCTGAGCTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566442.5
CDS-3UTR CCA 90 bp CAAAGGGCAGATAATGAACACATAAACAACTGCACATTTCAATTCCCAGAAGCCTTCCAGCGGCACTGGTaGTATCCCAAAGAGAAAAGA +
Preference number: 4 (lower is better)
Translates to: QRADNEHINNCTFQFPEAFQRHW*YPKEKR
Trigger: TCTTTTCTCTTTGGGATACCACCAGTGCCGCTGGAA...GGCTTCTGGGAATTGAAATGTGCAGTTGTTTATGTGTTCATTATCTGCCCTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR CCA 90 bp AGGCTGTCTCCACTTGTCTCTAGCCAAATGTTTCAATATAGATTTGGGTCAAAACAGAGAATACCAATATaGCAGGAGGCCATAGCGCTC +
Preference number: 4 (lower is better)
Translates to: RLSPLVSSQMFQYRFGSKQRIPI*QEAIAL
Trigger: GAGCGCTATGGCCTCCTGCCATATTGGTATTCTCTG...TTTTGACCCAAATCTATATTGAAACATTTGGCTAGAGACAAGTGGAGACAGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR CCA 90 bp TGGTGCAGAGCTCAAATCTCAACTCATACTATGAAATGTGTCCACAAGGAAATGGAGCACAGTTATAAGTaGGACAGCATTACGGGGAAG +
Preference number: 4 (lower is better)
Translates to: WCRAQISTHTMKCVHKEMEHSYK*DSITGK
Trigger: CTTCCCCGTAATGCTGTCCCACTTATAACTGTGCTC...CATTTCCTTGTGGACACATTTCATAGTATGAGTTGAGATTTGAGCTCTGCACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR CCA 90 bp TTGATCTTGCTTTTCCTGAGGCACCAGGACTCTTCACTGTTATGTAAAGAACTGGAGAAGGTGGCTGGTTaGGCAAAGCTTCATTTTCAT +
Preference number: 4 (lower is better)
Translates to: LILLFLRHQDSSLLCKELEKVAG*AKLHFH
Trigger: ATGAAAATGAAGCTTTGCCCAACCAGCCACCTTCTC...CAGTTCTTTACATAACAGTGAAGAGTCCTGGTGCCTCAGGAAAAGCAAGATCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440615.6
CDS-3UTR TCA 90 bp AGAGGAACCTTACTTGCTTCATTGATGATTTGGAACCTGGTGCTGTCTTCATCTTGGAGTGACAAATCTTaGCTCTTGCTCCTGGAATTT +
Preference number: 4 (lower is better)
Translates to: RGTLLASLMIWNLVLSSSWSDKS*LLLLEF
Trigger: AAATTCCAGGAGCAAGAGTCAAGATTTGTCACTCCA...AGATGAAGACAGCACCAGGTTCCAAATCATCAATGAAGCAAGTAAGGTTCCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567784.5
CDS-3UTR TCA 90 bp GAGAGGAACCTTACTTGCTTCATTGATGATTTGGAACCTGGTGCTGTCTTCATCTGTCTTCATCTGTTGTaGCTGAATCCAATAATGCCT +
Preference number: 4 (lower is better)
Translates to: ERNLTCFIDDLEPGAVFICLHLL*LNPIMP
Trigger: AGGCATTATTGGATTCAGTCACAACAGATGAAGACA...GATGAAGACAGCACCAGGTTCCAAATCATCAATGAAGCAAGTAAGGTTCCTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567784.5
CDS-3UTR TCA 90 bp TACCTCTCATTCATTAAGTGCCTACTGGGAGCTAGCCACTTCACAGAGACCTTTATTTTTAAGTTGGTGTaGTTCTGCATGTTGTGGGAT +
Preference number: 4 (lower is better)
Translates to: YLSFIKCLLGASHFTETFIFKLV*FCMLWD
Trigger: ATCCCACAACATGCAGAATCACACCAACTTAAAAAT...AAAGGTCTCTGTGAAGTGGCTAGCTCCCAGTAGGCACTTAATGAATGAGAGGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR TCA 90 bp ACAAGCTCAGATAGAAATCCCCACTATACGCACAAAGCTGGATTCAAATTATTCAATGATGCCACTCTCTaGCATCCAGTGCACATGAGT +
Preference number: 4 (lower is better)
Translates to: TSSDRNPHYTHKAGFKLFNDATL*HPVHMS
Trigger: ACTCATGTGCACTGGATGTCAGAGAGTGGCATCATT...GAATAATTTGAATCCAGCTTTGTGCGTATAGTGGGGATTTCTATCTGAGCTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566442.5
CDS-3UTR TCA 90 bp GACAAAGTGAAGGAATTCTGCACACAGACCAAACTCCAGAATTGTATTTTTCTTGGTTCTGTGACTGGATaGACCAATAATGCACTCCCC +
Preference number: 4 (lower is better)
Translates to: DKVKEFCTQTKLQNCIFLGSVTG*TNNALP
Trigger: GGGGAGTGCATTATTGGTTCATCCAGTCACAGAACC...AAGAAAAATACAATTCTGGAGTTTGGTCTGTGTGCAGAATTCCTTCACTTTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR TCA 90 bp CCCTTCGAGGGTTTGGTAGGTGGAAATCCTAGGAATCTCATTACTAAGGCTTTCGCCAGATTGCCACTCTaGAAGATTATACTTACATTT +
Preference number: 4 (lower is better)
Translates to: PFEGLVGGNPRNLITKAFARLPL*KIILTF
Trigger: AAATGTAAGTATAATCTTTCAGAGTGGCAATCTGGC...GAAAGCCTTAGTAATGAGATTCCTAGGATTTCCACCTACCAAACCCTCGAAGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR TCA 90 bp CCCTTCGAGGGTTTGGTAGGTGGAAATCCTAGGAATCTCATTACTAAGGCTTTCATAGTGAAAAGGATGTaGCAAAGTGAAGGAATTCTG +
Preference number: 4 (lower is better)
Translates to: PFEGLVGGNPRNLITKAFIVKRM*QSEGIL
Trigger: CAGAATTCCTTCACTTTGTCACATCCTTTTCACTAT...GAAAGCCTTAGTAATGAGATTCCTAGGATTTCCACCTACCAAACCCTCGAAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR GCA 90 bp CCCTTCGAGGGTTTGGTAGGTGGAAATCCTAGGAATCTCATTACTAAGGCTTTCAATGAAAACTTCCTGTaGAAAAATTGCTTCTGGTGG +
Preference number: 4 (lower is better)
Translates to: PFEGLVGGNPRNLITKAFNENFL*KNCFWW
Trigger: CCACCAGAAGCAATTTTTGCACAGGAAGTTTTCATT...GAAAGCCTTAGTAATGAGATTCCTAGGATTTCCACCTACCAAACCCTCGAAGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR GCA 90 bp AGCCCCATGTTGCTCTCTGGTACACAAATTCAGAAATGGGAGGTAGGTAAAGTGATGCACAATGTTGATTaGCTTTGGGAAGAATCTTGT +
Preference number: 4 (lower is better)
Translates to: SPMLLSGTQIQKWEVGKVMHNVD*LWEESC
Trigger: ACAAGATTCTTCCCAAAGGCAATCAACATTGTGCAT...CACTTTACCTACCTCCCATTTCTGAATTTGTGTACCAGAGAGCAACATGGGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR GCA 90 bp AGGCTGTCTCCACTTGTCTCTAGCCAAATGTTTCAATATAGATTTGGGTCAAAATCTGCTGCACAGCATTaGCAACTAATGGCTCTGTCT +
Preference number: 4 (lower is better)
Translates to: RLSPLVSSQMFQYRFGSKSAAQH*QLMALS
Trigger: AGACAGAGCCATTAGTTGGCAATGCTGTGCAGCAGA...TTTTGACCCAAATCTATATTGAAACATTTGGCTAGAGACAAGTGGAGACAGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR GCA 90 bp CAAAGGGCAGATAATGAACACATAAACAACTGCACATTTCAATTCCCAGAAGCCAGCTGTGGAAACCAATaGTATCAGGGAGAAGTCCAA +
Preference number: 4 (lower is better)
Translates to: QRADNEHINNCTFQFPEASCGNQ*YQGEVQ
Trigger: TTGGACTTCTCCCTGATAGCATTGGTTTCCACAGCT...GGCTTCTGGGAATTGAAATGTGCAGTTGTTTATGTGTTCATTATCTGCCCTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR GCA 90 bp AAACATCATGGTGGTAGAAATAGCTTTGTCTATGTCTTCAAGCATAGTGTTGATCATCCTCGGAGAAGCTaGTGGAAGTGTTGTCTCTGG +
Preference number: 4 (lower is better)
Translates to: KHHGGRNSFVYVFKHSVDHPRRS*WKCCLW
Trigger: CCAGAGACAACACTTCCAGCAGCTTCTCCGAGGATG...ATCAACACTATGCTTGAAGACATAGACAAAGCTATTTCTACCACCATGATGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440615.6
CDS-3UTR GCA 90 bp GTAGTTGTGCCTTATCTGCTGAGAAGGTGGCTGGTTGGGCAAAGCTTCATTTTCTTTCTTCCTGTAAAATaGGATCTTGTTACAGTCTCT +
Preference number: 4 (lower is better)
Translates to: VVVPYLLRRWLVGQSFIFFLPVK*DLVTVS
Trigger: AGAGACTGTAACAAGATCGCATTTTACAGGAAGAAA...GAAAATGAAGCTTTGCCCAACCAGCCACCTTCTCAGCAGATAAGGCACAACTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570013.5
CDS-3UTR CCA 90 bp AGGCTGTCTCCACTTGTCTCTAGCCAAATGTTTCAATATAGATTTGGGTCAAAAAGTGTCCAAGGCTACTaGGATCTTTACAGTACACCC +
Preference number: 4 (lower is better)
Translates to: RLSPLVSSQMFQYRFGSKSVQGY*DLYSTP
Trigger: GGGTGTACTGTAAAGATCCCAGTAGCCTTGGACACT...TTTTGACCCAAATCTATATTGAAACATTTGGCTAGAGACAAGTGGAGACAGCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR CCA 90 bp TGGTGCAGAGCTCAAATCTCAACTCATACTATGAAATGTGTCCACAAGGAAATGCAGTCATCCAGCCTGTaGATTTTCCTACAGTTGTCT +
Preference number: 4 (lower is better)
Translates to: WCRAQISTHTMKCVHKEMQSSSL*IFLQLS
Trigger: AGACAACTGTAGGAAAATCCACAGGCTGGATGACTG...CATTTCCTTGTGGACACATTTCATAGTATGAGTTGAGATTTGAGCTCTGCACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR CCA 90 bp CAAAGGGCAGATAATGAACACATAAACAACTGCACATTTCAATTCCCAGAAGCCGTCACAGATGTGACATaGCTACCTCCTCAAACCATA +
Preference number: 4 (lower is better)
Translates to: QRADNEHINNCTFQFPEAVTDVT*LPPQTI
Trigger: TATGGTTTGAGGAGGTAGCCATGTCACATCTGTGAC...GGCTTCTGGGAATTGAAATGTGCAGTTGTTTATGTGTTCATTATCTGCCCTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR CCA 90 bp AACATCATGGTGGTAGAAATAGCTTTGTCTATGTCTTCAAGCATAGTGTTGATCTTAGCTGCCTGTTCCTaGCCATTTCTGCAGACACAG +
Preference number: 4 (lower is better)
Translates to: NIMVVEIALSMSSSIVLILAACS*PFLQTQ
Trigger: CTGTGTCTGCAGAAATGGCCAGGAACAGGCAGCTAA...GATCAACACTATGCTTGAAGACATAGACAAAGCTATTTCTACCACCATGATGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440615.6
CDS-3UTR CCA 90 bp AGGTTGATCTTGCTTTTCCTGAGGCACCAGGACTCTTCACTGTTATGTAAAGAAACAGTTGCAGCCAGTTaGTTTATTGCAAGCACTGAT +
Preference number: 4 (lower is better)
Translates to: RLILLFLRHQDSSLLCKETVAAS*FIASTD
Trigger: ATCAGTGCTTGCAATAAACCAACTGGCTGCAACTGT...TTCTTTACATAACAGTGAAGAGTCCTGGTGCCTCAGGAAAAGCAAGATCAACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440615.6
CDS-3UTR TCA 90 bp AGGTTGATCTTGCTTTTCCTGAGGCACCAGGACTCTTCACTGTTATGTAAAGAATGTCTTCATCTGTTGTaGCTGAATCCAATAATGCCT +
Preference number: 4 (lower is better)
Translates to: RLILLFLRHQDSSLLCKECLHLL*LNPIMP
Trigger: AGGCATTATTGGATTCAGTCACAACAGATGAAGACA...TTCTTTACATAACAGTGAAGAGTCCTGGTGCCTCAGGAAAAGCAAGATCAACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440615.6
CDS-3UTR TCA 90 bp TTCAACTCCCAGTGTTTATGTGCTTTGACTGTGTTTCTGCTGCTTATCATTTTGGCCTGGCCAACATGGTaGAAACCTTTCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: FNSQCLCALTVFLLLIILAWPTW*KPFSTK
Trigger: TTTAGTAGAGAAAGGTTTTCACCATGTTGGCCAGGC...CAAAATGATAAGCAGCAGAAACACAGTCAAAGCACATAAACACTGGGAGTTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR TCA 90 bp AAACATCATGGTGGTAGAAATAGCTTTGTCTATGTCTTCAAGCATAGTGTTGATAAAGACATAGAACAGTaGGTGGCCACCTCTACCAGC +
Preference number: 4 (lower is better)
Translates to: KHHGGRNSFVYVFKHSVDKDIEQ*VATSTS
Trigger: GCTGGTAGAGGTGGCCACTCACTGTTCTATGTCTTT...ATCAACACTATGCTTGAAGACATAGACAAAGCTATTTCTACCACCATGATGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440615.6
CDS-3UTR GCA 90 bp ACAAGCTCAGATAGAAATCCCCACTATACGCACAAAGCTGGATTCAAATTATTCGTCTCCTTTTCCATCTaGCAATATCAGACTGCCTGT +
Preference number: 4 (lower is better)
Translates to: TSSDRNPHYTHKAGFKLFVSFSI*QYQTAC
Trigger: ACAGGCAGTCTGATATTGGCAGATGGAAAAGGAGAC...GAATAATTTGAATCCAGCTTTGTGCGTATAGTGGGGATTTCTATCTGAGCTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566442.5
CDS-3UTR GCA 90 bp ACAAGCTCAGATAGAAATCCCCACTATACGCACAAAGCTGGATTCAAATTATTCCAGTGTGTACTCTACTaGAGGCTCTGTATTGATCTC +
Preference number: 4 (lower is better)
Translates to: TSSDRNPHYTHKAGFKLFQCVLY*RLCIDL
Trigger: GAGATCAATACAGAGCCTGCAGTAGAGTACACACTG...GAATAATTTGAATCCAGCTTTGTGCGTATAGTGGGGATTTCTATCTGAGCTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566442.5
CDS-3UTR GCA 90 bp AGGCTGTCTCCACTTGTCTCTAGCCAAATGTTTCAATATAGATTTGGGTCAAAAAAACCCTGCATCCACTaGTTTTACATCCTGCTCATC +
Preference number: 4 (lower is better)
Translates to: RLSPLVSSQMFQYRFGSKKPCIH*FYILLI
Trigger: GATGAGCAGGATGTAAAAGCAGTGGATGCAGGGTTT...TTTTGACCCAAATCTATATTGAAACATTTGGCTAGAGACAAGTGGAGACAGCCT
41% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR GCA 90 bp TGGTGCAGAGCTCAAATCTCAACTCATACTATGAAATGTGTCCACAAGGAAATGTTCCTGTGCAAAAATTaGTTCTGGTGGAGGTATTGG +
Preference number: 4 (lower is better)
Translates to: WCRAQISTHTMKCVHKEMFLCKN*FWWRYW
Trigger: CCAATACCTCCACCAGAAGCAATTTTTGCACAGGAA...CATTTCCTTGTGGACACATTTCATAGTATGAGTTGAGATTTGAGCTCTGCACCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR GCA 90 bp AGCCCCATGTTGCTCTCTGGTACACAAATTCAGAAATGGGAGGTAGGTAAAGTGAGATCTGATATAAGATaGCAATGTCTCTGCTATTTC +
Preference number: 4 (lower is better)
Translates to: SPMLLSGTQIQKWEVGKVRSDIR*QCLCYF
Trigger: GAAATAGCAGAGACATTGGCATCTTATATCAGATCT...CACTTTACCTACCTCCCATTTCTGAATTTGTGTACCAGAGAGCAACATGGGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR GCA 90 bp TACCTCTCATTCATTAAGTGCCTACTGGGAGCTAGCCACTTCACAGAGACCTTTGAACACATAAACAACTaGACATTTCAATTCCCAGAA +
Preference number: 4 (lower is better)
Translates to: YLSFIKCLLGASHFTETFEHINN*TFQFPE
Trigger: TTCTGGGAATTGAAATGTGCAGTTGTTTATGTGTTC...AAAGGTCTCTGTGAAGTGGCTAGCTCCCAGTAGGCACTTAATGAATGAGAGGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR GCA 90 bp TTGATCTTGCTTTTCCTGAGGCACCAGGACTCTTCACTGTTATGTAAAGAACTGGCACCTGACCTTACTTaGTTCATTGATGATTTGGAA +
Preference number: 4 (lower is better)
Translates to: LILLFLRHQDSSLLCKELAPDLT*FIDDLE
Trigger: TTCCAAATCATCAATGAAGCAAGTAAGGTCAGGTGC...CAGTTCTTTACATAACAGTGAAGAGTCCTGGTGCCTCAGGAAAAGCAAGATCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440615.6
CDS-3UTR CCA 90 bp AGGCTGTCTCCACTTGTCTCTAGCCAAATGTTTCAATATAGATTTGGGTCAAAACTTGACTCTTGCTCCTaGAATTTTTCAGGCCCAAAC +
Preference number: 4 (lower is better)
Translates to: RLSPLVSSQMFQYRFGSKLDSCS*NFSGPN
Trigger: GTTTGGGCCTGAAAAATTCCAGGAGCAAGAGTCAAG...TTTTGACCCAAATCTATATTGAAACATTTGGCTAGAGACAAGTGGAGACAGCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR CCA 90 bp ACAAGCTCAGATAGAAATCCCCACTATACGCACAAAGCTGGATTCAAATTATTCCTTGACTCTTGCTCCTaGAATTTTTCAGGCCCAAAC +
Preference number: 4 (lower is better)
Translates to: TSSDRNPHYTHKAGFKLFLDSCS*NFSGPN
Trigger: GTTTGGGCCTGAAAAATTCCAGGAGCAAGAGTCAAG...GAATAATTTGAATCCAGCTTTGTGCGTATAGTGGGGATTTCTATCTGAGCTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566442.5
CDS-3UTR CCA 90 bp ACAAGCTCAGATAGAAATCCCCACTATACGCACAAAGCTGGATTCAAATTATTCGATAGGTGGACTTCTTaGAAAGCCACTGTTTCTGAC +
Preference number: 4 (lower is better)
Translates to: TSSDRNPHYTHKAGFKLFDRWTS*KATVSD
Trigger: GTCAGAAACAGTGGCTTTCCAAGAAGTCCACCTATC...GAATAATTTGAATCCAGCTTTGTGCGTATAGTGGGGATTTCTATCTGAGCTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566442.5
CDS-3UTR CCA 90 bp ACAAGCTCAGATAGAAATCCCCACTATACGCACAAAGCTGGATTCAAATTATTCGGGTTTGCTGTGATATaGCACTTCAGGTCTCCTTTT +
Preference number: 4 (lower is better)
Translates to: TSSDRNPHYTHKAGFKLFGFAVI*HFRSPF
Trigger: AAAAGGAGACCTGAAGTGCCATATCACAGCAAACCC...GAATAATTTGAATCCAGCTTTGTGCGTATAGTGGGGATTTCTATCTGAGCTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566442.5
CDS-3UTR CCA 90 bp CCCTTCGAGGGTTTGGTAGGTGGAAATCCTAGGAATCTCATTACTAAGGCTTTCAGGTATTGGAATGAATaGCCATCATCAAGATATAAC +
Preference number: 4 (lower is better)
Translates to: PFEGLVGGNPRNLITKAFRYWNE*PSSRYN
Trigger: GTTATATCTTGATGATGGCCATTCATTCCAATACCT...GAAAGCCTTAGTAATGAGATTCCTAGGATTTCCACCTACCAAACCCTCGAAGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR CCA 90 bp AGAATGCTAGCTATATGGCCTCCATTGTCAGTGGCTAATATGATAGCCTGTTTCTCAAGGTTTATTCAATaGCACAGCTGTGGAAACCAA +
Preference number: 4 (lower is better)
Translates to: RMLAIWPPLSVANMIACFSRFIQ*HSCGNQ
Trigger: TTGGTTTCCACAGCTGTGCCATTGAATAAACCTTGA...GAAACAGGCTATCATATTAGCCACTGACAATGGAGGCCATATAGCTAGCATTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR CCA 90 bp AGGTTGATCTTGCTTTTCCTGAGGCACCAGGACTCTTCACTGTTATGTAAAGAACCGGGATCCAGAGGATaGTCTAATAGTTCATTAAAT +
Preference number: 4 (lower is better)
Translates to: RLILLFLRHQDSSLLCKEPGSRG*SNSSLN
Trigger: ATTTAATGAACTATTAGACCATCCTCTGGATCCCGG...TTCTTTACATAACAGTGAAGAGTCCTGGTGCCTCAGGAAAAGCAAGATCAACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440615.6
CDS-3UTR CCA 90 bp ACAAGCTCAGATAGAAATCCCCACTATACGCACAAAGCTGGATTCAAATTATTCTGTCTTGATTATGGGTaGCTGATGAGGAACGTGCTT +
Preference number: 4 (lower is better)
Translates to: TSSDRNPHYTHKAGFKLFCLDYG*LMRNVL
Trigger: AAGCACGTTCCTCATCAGCCACCCATAATCAAGACA...GAATAATTTGAATCCAGCTTTGTGCGTATAGTGGGGATTTCTATCTGAGCTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566442.5
CDS-3UTR CCA 90 bp ACAAGCTCAGATAGAAATCCCCACTATACGCACAAAGCTGGATTCAAATTATTCCTTTTCCAGACTTTCTaGCCCCAAAGTCTGACATTG +
Preference number: 4 (lower is better)
Translates to: TSSDRNPHYTHKAGFKLFLFQTF*PQSLTL
Trigger: CAATGTCAGACTTTGGGGCCAGAAAGTCTGGAAAAG...GAATAATTTGAATCCAGCTTTGTGCGTATAGTGGGGATTTCTATCTGAGCTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000566442.5
CDS-3UTR TCA 90 bp AGGCTGTCTCCACTTGTCTCTAGCCAAATGTTTCAATATAGATTTGGGTCAAAATGGAGTGACAAATCTTaGCTCTTGCTCCTGGAATTT +
Preference number: 4 (lower is better)
Translates to: RLSPLVSSQMFQYRFGSKWSDKS*LLLLEF
Trigger: AAATTCCAGGAGCAAGAGTCAAGATTTGTCACTCCA...TTTTGACCCAAATCTATATTGAAACATTTGGCTAGAGACAAGTGGAGACAGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR TCA 90 bp ACAAGCTCAGATAGAAATCCCCACTATACGCACAAAGCTGGATTCAAATTATTCTGGAGTGACAAATCTTaGCTCTTGCTCCTGGAATTT +
Preference number: 4 (lower is better)
Translates to: TSSDRNPHYTHKAGFKLFWSDKS*LLLLEF
Trigger: AAATTCCAGGAGCAAGAGTCAAGATTTGTCACTCCA...GAATAATTTGAATCCAGCTTTGTGCGTATAGTGGGGATTTCTATCTGAGCTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566442.5
CDS-3UTR TCA 90 bp ACAAGCTCAGATAGAAATCCCCACTATACGCACAAAGCTGGATTCAAATTATTCGCAGCTCTTTGTTTGTaGAGAATCTGTAGATGCTCA +
Preference number: 4 (lower is better)
Translates to: TSSDRNPHYTHKAGFKLFAALCL*RICRCS
Trigger: TGAGCATCTACAGATTCTTCACAAACAAAGAGCTGC...GAATAATTTGAATCCAGCTTTGTGCGTATAGTGGGGATTTCTATCTGAGCTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566442.5
CDS-3UTR TCA 90 bp AGGCTGTCTCCACTTGTCTCTAGCCAAATGTTTCAATATAGATTTGGGTCAAAAGTGGAGGTATTGGAATaGATGGCCATCATCAAGATA +
Preference number: 4 (lower is better)
Translates to: RLSPLVSSQMFQYRFGSKVEVLE*MAIIKI
Trigger: TATCTTGATGATGGCCATTCATTCCAATACCTCCAC...TTTTGACCCAAATCTATATTGAAACATTTGGCTAGAGACAAGTGGAGACAGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR TCA 90 bp CAAAGGGCAGATAATGAACACATAAACAACTGCACATTTCAATTCCCAGAAGCCTGCCAACTCATTCCTTaGCATTTACATCTTGAAGGA +
Preference number: 4 (lower is better)
Translates to: QRADNEHINNCTFQFPEACQLIP*HLHLEG
Trigger: TCCTTCAAGATGTAAATGTCAAGGAATGAGTTGGCA...GGCTTCTGGGAATTGAAATGTGCAGTTGTTTATGTGTTCATTATCTGCCCTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR TCA 90 bp CAAAGGGCAGATAATGAACACATAAACAACTGCACATTTCAATTCCCAGAAGCCAGTGTTTATGTGCTTTaGCTGTGTTTCTGCTGCTTA +
Preference number: 4 (lower is better)
Translates to: QRADNEHINNCTFQFPEASVYVL*LCFCCL
Trigger: TAAGCAGCAGAAACACAGTCAAAGCACATAAACACT...GGCTTCTGGGAATTGAAATGTGCAGTTGTTTATGTGTTCATTATCTGCCCTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR TCA 90 bp ACAAGCTCAGATAGAAATCCCCACTATACGCACAAAGCTGGATTCAAATTATTCTTGGCAAATTTGTCTTaGTTATGGGTGGCTGATGAG +
Preference number: 4 (lower is better)
Translates to: TSSDRNPHYTHKAGFKLFLANLS*LWVADE
Trigger: CTCATCAGCCACCCATAATCAAGACAAATTTGCCAA...GAATAATTTGAATCCAGCTTTGTGCGTATAGTGGGGATTTCTATCTGAGCTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566442.5
CDS-3UTR TCA 90 bp ACAAGCTCAGATAGAAATCCCCACTATACGCACAAAGCTGGATTCAAATTATTCACAAATAAAAACAAGTaGAACAGCCACCCAAGGACC +
Preference number: 4 (lower is better)
Translates to: TSSDRNPHYTHKAGFKLFTNKNK*NSHPRT
Trigger: GGTCCTTGGGTGGCTGTTTCACTTGTTTTTATTTGT...GAATAATTTGAATCCAGCTTTGTGCGTATAGTGGGGATTTCTATCTGAGCTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566442.5
CDS-3UTR GCA 90 bp ACAAGCTCAGATAGAAATCCCCACTATACGCACAAAGCTGGATTCAAATTATTCCTGACGCCTGTAAAATaGGATCTTGTTACAGTCTCT +
Preference number: 4 (lower is better)
Translates to: TSSDRNPHYTHKAGFKLFLTPVK*DLVTVS
Trigger: AGAGACTGTAACAAGATCGCATTTTACAGGCGTCAG...GAATAATTTGAATCCAGCTTTGTGCGTATAGTGGGGATTTCTATCTGAGCTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566442.5
CDS-3UTR GCA 90 bp ACAAGCTCAGATAGAAATCCCCACTATACGCACAAAGCTGGATTCAAATTATTCTACCTTGAATGGGTTTaGTGTGATATGGCACTTCAG +
Preference number: 4 (lower is better)
Translates to: TSSDRNPHYTHKAGFKLFYLEWV*CDMALQ
Trigger: CTGAAGTGCCATATCACAGCAAACCCATTCAAGGTA...GAATAATTTGAATCCAGCTTTGTGCGTATAGTGGGGATTTCTATCTGAGCTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566442.5
CDS-3UTR GCA 90 bp TTCAACTCCCAGTGTTTATGTGCTTTGACTGTGTTTCTGCTGCTTATCATTTTGATGCTCATCAAACCCTaGATCCACTGCTTTTACATC +
Preference number: 4 (lower is better)
Translates to: FNSQCLCALTVFLLLIILMLIKP*IHCFYI
Trigger: GATGTAAAAGCAGTGGATGCAGGGTTTGATGAGCAT...CAAAATGATAAGCAGCAGAAACACAGTCAAAGCACATAAACACTGGGAGTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR GCA 90 bp AACATCATGGTGGTAGAAATAGCTTTGTCTATGTCTTCAAGCATAGTGTTGATCTGTCCCTTCTACAGTTaGAGCCAGTTGGTTTATTGC +
Preference number: 4 (lower is better)
Translates to: NIMVVEIALSMSSSIVLICPFYS*SQLVYC
Trigger: GCAATAAACCAACTGGCTGCAACTGTAGAAGGGACA...GATCAACACTATGCTTGAAGACATAGACAAAGCTATTTCTACCACCATGATGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440615.6
CDS-3UTR GCA 90 bp GAGAGGAACCTTACTTGCTTCATTGATGATTTGGAACCTGGTGCTGTCTTCATCTTTCTTCCTGTAAAATaGGATCTTGTTACAGTCTCT +
Preference number: 4 (lower is better)
Translates to: ERNLTCFIDDLEPGAVFIFLPVK*DLVTVS
Trigger: AGAGACTGTAACAAGATCGCATTTTACAGGAAGAAA...GATGAAGACAGCACCAGGTTCCAAATCATCAATGAAGCAAGTAAGGTTCCTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567784.5
CDS-3UTR CCA 90 bp ACAAGCTCAGATAGAAATCCCCACTATACGCACAAAGCTGGATTCAAATTATTCATAATGCCTGATAGGTaGACTTCTTGGAAAGCCACT +
Preference number: 4 (lower is better)
Translates to: TSSDRNPHYTHKAGFKLFIMPDR*TSWKAT
Trigger: AGTGGCTTTCCAAGAAGTCCACCTATCAGGCATTAT...GAATAATTTGAATCCAGCTTTGTGCGTATAGTGGGGATTTCTATCTGAGCTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566442.5
CDS-3UTR CCA 90 bp ACAAGCTCAGATAGAAATCCCCACTATACGCACAAAGCTGGATTCAAATTATTCCCGGAACTTCAAATCTaGGTTTTAGAGGAGTCTCTT +
Preference number: 4 (lower is better)
Translates to: TSSDRNPHYTHKAGFKLFPELQI*VLEESL
Trigger: AAGAGACTCCTCTAAAACCCAGATTTGAAGTTCCGG...GAATAATTTGAATCCAGCTTTGTGCGTATAGTGGGGATTTCTATCTGAGCTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566442.5
CDS-3UTR CCA 90 bp GACAAAGTGAAGGAATTCTGCACACAGACCAAACTCCAGAATTGTATTTTTCTTAGAATGCTAGCTATATaGCCTCCATTGTCAGTGGCT +
Preference number: 4 (lower is better)
Translates to: DKVKEFCTQTKLQNCIFLRMLAI*PPLSVA
Trigger: AGCCACTGACAATGGAGGCCATATAGCTAGCATTCT...AAGAAAAATACAATTCTGGAGTTTGGTCTGTGTGCAGAATTCCTTCACTTTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR CCA 90 bp AAACATCATGGTGGTAGAAATAGCTTTGTCTATGTCTTCAAGCATAGTGTTGATTTCTACAAAGAATACTaGCAACCTCACGCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: KHHGGRNSFVYVFKHSVDFYKEY*QPHAGH
Trigger: GTGCCCAGCGTGAGGTTGCCAGTATTCTTTGTAGAA...ATCAACACTATGCTTGAAGACATAGACAAAGCTATTTCTACCACCATGATGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440615.6
CDS-3UTR TCA 90 bp TTCAACTCCCAGTGTTTATGTGCTTTGACTGTGTTTCTGCTGCTTATCATTTTGTGTCTTCATCTGTTGTaGCTGAATCCAATAATGCCT +
Preference number: 4 (lower is better)
Translates to: FNSQCLCALTVFLLLIILCLHLL*LNPIMP
Trigger: AGGCATTATTGGATTCAGTCACAACAGATGAAGACA...CAAAATGATAAGCAGCAGAAACACAGTCAAAGCACATAAACACTGGGAGTTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR TCA 90 bp ACAAGCTCAGATAGAAATCCCCACTATACGCACAAAGCTGGATTCAAATTATTCTGTCTTCATCTGTTGTaGCTGAATCCAATAATGCCT +
Preference number: 4 (lower is better)
Translates to: TSSDRNPHYTHKAGFKLFCLHLL*LNPIMP
Trigger: AGGCATTATTGGATTCAGTCACAACAGATGAAGACA...GAATAATTTGAATCCAGCTTTGTGCGTATAGTGGGGATTTCTATCTGAGCTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566442.5
CDS-3UTR TCA 90 bp ACAAGCTCAGATAGAAATCCCCACTATACGCACAAAGCTGGATTCAAATTATTCCAGGAGATAAGGTACTaGACCATAAATGCCCATTTT +
Preference number: 4 (lower is better)
Translates to: TSSDRNPHYTHKAGFKLFQEIRY*TINAHF
Trigger: AAAATGGGCATTTATGGTTCAGTACCTTATCTCCTG...GAATAATTTGAATCCAGCTTTGTGCGTATAGTGGGGATTTCTATCTGAGCTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566442.5
CDS-3UTR TCA 90 bp ACAAGCTCAGATAGAAATCCCCACTATACGCACAAAGCTGGATTCAAATTATTCAATGTCTGTAAGGTGTaGGTACTGTTTGAAGACATC +
Preference number: 4 (lower is better)
Translates to: TSSDRNPHYTHKAGFKLFNVCKV*VLFEDI
Trigger: GATGTCTTCAAACAGTACTCACACCTTACAGACATT...GAATAATTTGAATCCAGCTTTGTGCGTATAGTGGGGATTTCTATCTGAGCTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566442.5
CDS-3UTR GCA 90 bp AGAATGCTAGCTATATGGCCTCCATTGTCAGTGGCTAATATGATAGCCTGTTTCTTTTATCAGTCCTTCTaGAGTAGCCATTTGATGATA +
Preference number: 4 (lower is better)
Translates to: RMLAIWPPLSVANMIACFFYQSF*SSHLMI
Trigger: TATCATCAAATGGCTACTGCAGAAGGACTGATAAAA...GAAACAGGCTATCATATTAGCCACTGACAATGGAGGCCATATAGCTAGCATTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR CCA 90 bp AAACATCATGGTGGTAGAAATAGCTTTGTCTATGTCTTCAAGCATAGTGTTGATCTTGACTCTTGCTCCTaGAATTTTTCAGGCCCAAAC +
Preference number: 4 (lower is better)
Translates to: KHHGGRNSFVYVFKHSVDLDSCS*NFSGPN
Trigger: GTTTGGGCCTGAAAAATTCCAGGAGCAAGAGTCAAG...ATCAACACTATGCTTGAAGACATAGACAAAGCTATTTCTACCACCATGATGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000440615.6
CDS-3UTR CCA 90 bp AACATCATGGTGGTAGAAATAGCTTTGTCTATGTCTTCAAGCATAGTGTTGATCATAATGCCTGATAGGTaGACTTCTTGGAAAGCCACT +
Preference number: 4 (lower is better)
Translates to: NIMVVEIALSMSSSIVLIIMPDR*TSWKAT
Trigger: AGTGGCTTTCCAAGAAGTCCACCTATCAGGCATTAT...GATCAACACTATGCTTGAAGACATAGACAAAGCTATTTCTACCACCATGATGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440615.6
CDS-3UTR CCA 90 bp TGGTGCAGAGCTCAAATCTCAACTCATACTATGAAATGTGTCCACAAGGAAATGTGCTCAAAGTATAATTaGCCCAGGGAATTTATGCTA +
Preference number: 4 (lower is better)
Translates to: WCRAQISTHTMKCVHKEMCSKYN*PREFML
Trigger: TAGCATAAATTCCCTGGGCCAATTATACTTTGAGCA...CATTTCCTTGTGGACACATTTCATAGTATGAGTTGAGATTTGAGCTCTGCACCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR CCA 90 bp AAACATCATGGTGGTAGAAATAGCTTTGTCTATGTCTTCAAGCATAGTGTTGATGTGCTTCTGATTGTCTaGCCAGTTCCCAAATTAGCT +
Preference number: 4 (lower is better)
Translates to: KHHGGRNSFVYVFKHSVDVLLIV*PVPKLA
Trigger: AGCTAATTTGGGAACTGGCCAGACAATCAGAAGCAC...ATCAACACTATGCTTGAAGACATAGACAAAGCTATTTCTACCACCATGATGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440615.6
CDS-3UTR CCA 90 bp AGGTTGATCTTGCTTTTCCTGAGGCACCAGGACTCTTCACTGTTATGTAAAGAATTATTCACCCAGAACTaGGAATCACAATTAGTAAAG +
Preference number: 4 (lower is better)
Translates to: RLILLFLRHQDSSLLCKELFTQN*ESQLVK
Trigger: CTTTACTAATTGTGATTCCCAGTTCTGGGTGAATAA...TTCTTTACATAACAGTGAAGAGTCCTGGTGCCTCAGGAAAAGCAAGATCAACCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440615.6
3UTR CAA 72 bp ATAGGTTTTATTACAGGTGATGTCAACTTTGATCACTaGCCTAAAGTGATGTTTACTGGGTTTCTCCCTGGT +
Preference number: 4 (lower is better)
Translates to: IGFITGDVNFDH*PKVMFTGFLPG
Trigger: ACCAGGGAGAAACCCAGTAAACATCACTTTAGGCAAGTGATCAAAGTTGACATCACCTGTAATAAAACCTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
3UTR CAA 72 bp GCTACCTCCTCAAACCATATTTGGGGGCACATGATATaGATAGGTTTTATTACAGGTGATGTCAACTTTGAT +
Preference number: 4 (lower is better)
Translates to: ATSSNHIWGHMI*IGFITGDVNFD
Trigger: ATCAAAGTTGACATCACCTGTAATAAAACCTATCAATATCATGTGCCCCCAAATATGGTTTGAGGAGGTAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318010.12
3UTR CAA 72 bp TTTGTCTCTCATGACCGTGACACTTTTGAAGAGTACTaGTCAGGTTTTTGTAGAATGACCCTAAATTTGGGT +
Preference number: 4 (lower is better)
Translates to: FVSHDRDTFEEY*SGFCRMTLNLG
Trigger: ACCCAAATTTAGGGTCATTCTACAAAAACCTGACAAGTACTCTTCAAAAGTGTCACGGTCATGAGAGACAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR TCA 90 bp ACAAGCTCAGATAGAAATCCCCACTATACGCACAAAGCTGGATTCAAATTATTCATTTTTAAGTTGGTGTaGTTCTGCATGTTGTGGGAT +
Preference number: 4 (lower is better)
Translates to: TSSDRNPHYTHKAGFKLFIFKLV*FCMLWD
Trigger: ATCCCACAACATGCAGAATCACACCAACTTAAAAAT...GAATAATTTGAATCCAGCTTTGTGCGTATAGTGGGGATTTCTATCTGAGCTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566442.5
CDS-3UTR TCA 90 bp GACAAAGTGAAGGAATTCTGCACACAGACCAAACTCCAGAATTGTATTTTTCTTGAAAGCAAAAAGACTTaGATACCACTCTCTGACCTT +
Preference number: 4 (lower is better)
Translates to: DKVKEFCTQTKLQNCIFLESKKT*IPLSDL
Trigger: AAGGTCAGAGAGTGGTATTCAAGTCTTTTTGCTTTC...AAGAAAAATACAATTCTGGAGTTTGGTCTGTGTGCAGAATTCCTTCACTTTGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR TCA 90 bp TTCAACTCCCAGTGTTTATGTGCTTTGACTGTGTTTCTGCTGCTTATCATTTTGAACACTGGAACAGAATaGAAACTTCCTGTGCAAAAA +
Preference number: 4 (lower is better)
Translates to: FNSQCLCALTVFLLLIILNTGTE*KLPVQK
Trigger: TTTTTGCACAGGAAGTTTTCATTCTGTTCCAGTGTT...CAAAATGATAAGCAGCAGAAACACAGTCAAAGCACATAAACACTGGGAGTTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR GCA 90 bp TTTGTAAACATCATGGTGGTAGAAATAGCTTTGTCTATGTCTTCAAGCATAGTGCTGACGCCTGTAAAATaGGATCTTGTTACAGTCTCT +
Preference number: 4 (lower is better)
Translates to: FVNIMVVEIALSMSSSIVLTPVK*DLVTVS
Trigger: AGAGACTGTAACAAGATCGCATTTTACAGGCGTCAG...CACTATGCTTGAAGACATAGACAAAGCTATTTCTACCACCATGATGTTTACAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440615.6
CDS-3UTR GCA 90 bp ACAAGCTCAGATAGAAATCCCCACTATACGCACAAAGCTGGATTCAAATTATTCGAGAGGAACCTTACTTaGTTCATTGATGATTTGGAA +
Preference number: 4 (lower is better)
Translates to: TSSDRNPHYTHKAGFKLFERNLT*FIDDLE
Trigger: TTCCAAATCATCAATGAAGCAAGTAAGGTTCCTCTC...GAATAATTTGAATCCAGCTTTGTGCGTATAGTGGGGATTTCTATCTGAGCTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566442.5
CDS-3UTR GCA 90 bp TGGTGCAGAGCTCAAATCTCAACTCATACTATGAAATGTGTCCACAAGGAAATGTCCTTTCTTCTCAACTaGAAAACTTACAGAAATAGG +
Preference number: 4 (lower is better)
Translates to: WCRAQISTHTMKCVHKEMSFLLN*KTYRNR
Trigger: CCTATTTCTGTAAGTTTTGCAGTTGAGAAGAAAGGA...CATTTCCTTGTGGACACATTTCATAGTATGAGTTGAGATTTGAGCTCTGCACCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR GCA 90 bp AAACATCATGGTGGTAGAAATAGCTTTGTCTATGTCTTCAAGCATAGTGTTGATGTAACTTCACAGAGGTaGTCAGAGATATTCCTGCAT +
Preference number: 4 (lower is better)
Translates to: KHHGGRNSFVYVFKHSVDVTSQR*SEIFLH
Trigger: ATGCAGGAATATCTCTGAGCACCTCTGTGAAGTTAC...ATCAACACTATGCTTGAAGACATAGACAAAGCTATTTCTACCACCATGATGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440615.6
CDS-3UTR CCA 90 bp ACAAGCTCAGATAGAAATCCCCACTATACGCACAAAGCTGGATTCAAATTATTCTGCTCAAAGTATAATTaGCCCAGGGAATTTATGCTA +
Preference number: 4 (lower is better)
Translates to: TSSDRNPHYTHKAGFKLFCSKYN*PREFML
Trigger: TAGCATAAATTCCCTGGGCCAATTATACTTTGAGCA...GAATAATTTGAATCCAGCTTTGTGCGTATAGTGGGGATTTCTATCTGAGCTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566442.5
3UTR CAA 72 bp CTAATGGCTCTGTCTTTTCCACCAAGAAGCATTTCTTaGATTACTAACACTATTGGAAGCAATGTCTTTGCT +
Preference number: 4 (lower is better)
Translates to: LMALSFPPRSIS*ITNTIGSNVFA
Trigger: AGCAAAGACATTGCTTCCAATAGTGTTAGTAATCAAAGAAATGCTTCTTGGTGGAAAAGACAGAGCCATTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR TCA 90 bp GACAAAGTGAAGGAATTCTGCACACAGACCAAACTCCAGAATTGTATTTTTCTTTGCTGCTTATCATTTTaGTGCCTTGATAGTGAAAAG +
Preference number: 4 (lower is better)
Translates to: DKVKEFCTQTKLQNCIFLCCLSF*CLDSEK
Trigger: CTTTTCACTATCAAGGCATCAAAATGATAAGCAGCA...AAGAAAAATACAATTCTGGAGTTTGGTCTGTGTGCAGAATTCCTTCACTTTGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR TCA 90 bp GACAAAGTGAAGGAATTCTGCACACAGACCAAACTCCAGAATTGTATTTTTCTTACAACTGAGGAAACTTaGGATATCTGCTGTATTTTG +
Preference number: 4 (lower is better)
Translates to: DKVKEFCTQTKLQNCIFLTTEET*DICCIL
Trigger: CAAAATACAGCAGATATCTCAAGTTTCCTCAGTTGT...AAGAAAAATACAATTCTGGAGTTTGGTCTGTGTGCAGAATTCCTTCACTTTGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR GCA 90 bp GACAAAGTGAAGGAATTCTGCACACAGACCAAACTCCAGAATTGTATTTTTCTTGAGAGGAACCTTACTTaGTTCATTGATGATTTGGAA +
Preference number: 4 (lower is better)
Translates to: DKVKEFCTQTKLQNCIFLERNLT*FIDDLE
Trigger: TTCCAAATCATCAATGAAGCAAGTAAGGTTCCTCTC...AAGAAAAATACAATTCTGGAGTTTGGTCTGTGTGCAGAATTCCTTCACTTTGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS TCA 90 bp GCCTGCGCAGTAGGTCCAAAGTCTCACGGCGCACAGACGACTGTCTaGGAGAGGGGCCGCTACGCCGCACAGCAAACAAGCTCCGCGACG +
Preference number: 5 (lower is better)
Translates to: ACAVGPKSHGAQTTV*ERGRYAAQQTSSAT
Trigger: CGTCGCGGAGCTTGTTTGCTGTGCGGCGTAGCGGCCCCTCTCTCAGACAGTCGTCTGTGCGCCGTGAGACTTTGGACCTACTGCGCAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561871.1
ENST00000562859.5
CDS TCA 90 bp CCCTTAGAGCAGAGCCGGAAGAAGGCGGGACGAACCGGAAGAGGGTaGAATGCTTTCGGTAGGCACTCCACGGCTGTGAAGATGGCGGCG +
Preference number: 5 (lower is better)
Translates to: PLEQSRKKAGRTGRG*NAFGRHSTAVKMAA
Trigger: CGCCGCCATCTTCACAGCCGTGGAGTGCCTACCGAAAGCATTTCACCCTCTTCCGGTTCGTCCCGCCTTCTTCCGGCTCTGCTCTAAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561871.1
ENST00000562859.5
CDS GCA 90 bp CCCGTCACCACTGTCGTTTTTCAGTGCGGGACCGGCAACCGTAGCTaGTGCCGACCGGTCCAAATGGCACATTCCGATACCGTCGGTGAG +
Preference number: 5 (lower is better)
Translates to: PVTTVVFQCGTGNRS*CRPVQMAHSDTVGE
Trigger: CTCACCGACGGTATCGGAATGTGCCATTTGGACCGGTCGGCAGCAGCTACGGTTGCCGGTCCCGCACTGAAAAACGACAGTGGTGACGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561871.1
CDS CCA 90 bp CGGCGGCTGCGTGGCTTCAGGTGTTGCCTGTCATTCTTCTGCTTCTaGGAGCTCACCCGTCACCACTGTCGTTTTTCAGTGCGGGACCGG +
Preference number: 5 (lower is better)
Translates to: RRLRGFRCCLSFFCF*ELTRHHCRFSVRDR
Trigger: CCGGTCCCGCACTGAAAAACGACAGTGGTGACGGGTGAGCTCCCAGAAGCAGAAGAATGACAGGCAACACCTGAAGCCACGCAGCCGCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000561871.1
ENST00000562170.5
ENST00000562859.5
CDS GCA 90 bp TCTTCTGCTTCTGGGAGCTCACCCGTCACCACTGTCGTTTTTCAGTaGGGGACCGGCAACCGTAGCTGCTGCCGACCGGTCCAAATGGCA +
Preference number: 5 (lower is better)
Translates to: SSASGSSPVTTVVFQ*GTGNRSCCRPVQMA
Trigger: TGCCATTTGGACCGGTCGGCAGCAGCTACGGTTGCCGGTCCCGCACTGAAAAACGACAGTGGTGACGGGTGAGCTCCCAGAAGCAGAAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561871.1
CDS CCA 90 bp GCTTTCGGTAGGCACTCCACGGCTGTGAAGATGGCGGCGGCTGCGTaGCTTCAGGTGTTGCCTGTCATTCTTCTGCTTCTGGGAGCTCAC +
Preference number: 5 (lower is better)
Translates to: AFGRHSTAVKMAAAA*LQVLPVILLLLGAH
Trigger: GTGAGCTCCCAGAAGCAGAAGAATGACAGGCAACACCTGAAGCCACGCAGCCGCCGCCATCTTCACAGCCGTGGAGTGCCTACCGAAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000561871.1
ENST00000562170.5
ENST00000562859.5
CDS TCA 90 bp AGTCCGGAAGAGGGTGAAATGCTTTCGGTAGGCACTCCACGGCTGTaGAGATGGCGGCGGCTGCGTGGCTTCAGGTGTTGCCTGTCATTC +
Preference number: 5 (lower is better)
Translates to: SPEEGEMLSVGTPRL*RWRRLRGFRCCLSF
Trigger: GAATGACAGGCAACACCTGAAGCCACGCAGCCGCCGCCATCTTCACAGCCGTGGAGTGCCTACCGAAAGCATTTCACCCTCTTCCGGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562170.5
CDS TCA 90 bp GAACCGGAAGAGGGTGAAATGCTTTCGGTAGGCACTCCACGGCTGTaGAGATGGCGGCGGCTGCGTGGCTTCAGGTGTTGCCTGTCATTC +
Preference number: 5 (lower is better)
Translates to: EPEEGEMLSVGTPRL*RWRRLRGFRCCLSF
Trigger: GAATGACAGGCAACACCTGAAGCCACGCAGCCGCCGCCATCTTCACAGCCGTGGAGTGCCTACCGAAAGCATTTCACCCTCTTCCGGTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561871.1
ENST00000562859.5
CDS GCA 90 bp AGATGGCGGCGGCTGCGTGGCTTCAGGTGTTGCCTGTCATTCTTCTaGTTCTGGGAGCTCACCCGTCACCACTGTCGTTTTTCAGTGCGG +
Preference number: 5 (lower is better)
Translates to: RWRRLRGFRCCLSFF*FWELTRHHCRFSVR
Trigger: CCGCACTGAAAAACGACAGTGGTGACGGGTGAGCTCCCAGAAGCAGAAGAATGACAGGCAACACCTGAAGCCACGCAGCCGCCGCCATCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000561871.1
ENST00000562170.5
ENST00000562859.5
CDS TCA 90 bp GCATGTAGCGATCTCTCTAACCCAGCTGACCAGGTTCCAACAGGATaGCGCCTGCGCAGTAGGTCCAAAGTCTCACGGCGCACAGACGAC +
Preference number: 5 (lower is better)
Translates to: ACSDLSNPADQVPTG*RLRSRSKVSRRTDD
Trigger: GTCGTCTGTGCGCCGTGAGACTTTGGACCTACTGCGCAGGCGTCATCCTGTTGGAACCTGGTCAGCTGGGTTAGAGAGATCGCTACATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561871.1
CDS GCA 90 bp GTCACCACTGTCGTTTTTCAGTGCGGGACCGGCAACCGTAGCTGCTaGCGACCGGTCCAAATGGCACATTCCGATACCGTCGGTGAGTAT +
Preference number: 5 (lower is better)
Translates to: VTTVVFQCGTGNRSC*RPVQMAHSDTVGEY
Trigger: ATACTCACCGACGGTATCGGAATGTGCCATTTGGACCGGTCGGCAGCAGCTACGGTTGCCGGTCCCGCACTGAAAAACGACAGTGGTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561871.1
CDS GCA 90 bp CTGTCTCCGTTTTCGGTTAAGGGTGGGAAGTGCCGGCCGGGTCTTTaGTGGAGGCTAGGTCTCCAGCCAGATTGTACTGCAGCATCGTAC +
Preference number: 5 (lower is better)
Translates to: LSPFSVKGGKCRPGL*WRLGLQPDCTAASY
Trigger: GTACGATGCTGCAGTACAATCTGGCTGGAGACCTAGCCTCCAGCAAAGACCCGGCCGGCACTTCCCACCCTTAACCGAAAACGGAGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566442.5
CDS GCA 90 bp GCAATGAGTCCCTCTCTGTCTCCGTTTTCGGTTAAGGGTGGGAAGTaGCGGCCGGGTCTTTGCTGGAGGCTAGGTCTCCAGCCAGATTGT +
Preference number: 5 (lower is better)
Translates to: AMSPSLSPFSVKGGK*RPGLCWRLGLQPDC
Trigger: ACAATCTGGCTGGAGACCTAGCCTCCAGCAAAGACCCGGCCGGCACTTCCCACCCTTAACCGAAAACGGAGACAGAGAGGGACTCATTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566442.5
CDS-3UTR CAA 90 bp CGATCTCTAGGGGAGAATAACTCCCACGGCTGCAGCGTATGCAGTGCACACAGACAGGGCTCTCGTCGCTaGGTGTTCATGGTGGCATGG +
Preference number: 5 (lower is better)
Translates to: RSLGENNSHGCSVCSAHRQGSRR*VFMVAW
Trigger: CCATGCCACCATGAACACCAAGCGACGAGAGCCCTG...TCTGTGTGCACTGCATACGCTGCAGCCGTGGGAGTTATTCTCCCCTAGAGATCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR CAA 90 bp GGAGCCACTGAGGTCTGTGGAGCCTTGGGCACCATGACACGACTGGTATGTTGTCCCGGAAAGCAGAGGTaGCAGTTAGCCGAGATCGTG +
Preference number: 5 (lower is better)
Translates to: GATEVCGALGTMTRLVCCPGKQR*QLAEIV
Trigger: CACGATCTCGGCTAACTGCAACCTCTGCTTTCCGGG...ACAACATACCAGTCGTGTCATGGTGCCCAAGGCTCCACAGACCTCAGTGGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS TCA 90 bp CTGATGAGGAACGTGCTTTTGTTAGGAACCGAAACTGGGCGGCGGTaGGGGCGTGTACGCAATGAGTCCAGGTTCCAACAGGATGACGCC +
Preference number: 5 (lower is better)
Translates to: LMRNVLLLGTETGRR*GRVRNESRFQQDDA
Trigger: GGCGTCATCCTGTTGGAACCTGGACTCATTGCGTACACGCCCTCACCGCCGCCCAGTTTCGGTTCCTAACAAAAGCACGTTCCTCATCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562859.5
CDS TCA 90 bp CTGATGAGGAACGTGCTTTTGTTAGGAACCGAAACTGGGCGGCGGTaGGGGCGTGTACGCAATGAGTCTACTAGACGCCACTTGGGCAGC +
Preference number: 5 (lower is better)
Translates to: LMRNVLLLGTETGRR*GRVRNESTRRHLGS
Trigger: GCTGCCCAAGTGGCGTCTAGTAGACTCATTGCGTACACGCCCTCACCGCCGCCCAGTTTCGGTTCCTAACAAAAGCACGTTCCTCATCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561871.1
CDS CCA 90 bp TCTCCGTTTTCGGTTAAGGGTGGGAAGTGCCGGCCGGGTCTTTGCTaGAGGCTAGGTCTCCAGCCAGATTGTACTGCAGCATCGTACTCT +
Preference number: 5 (lower is better)
Translates to: SPFSVKGGKCRPGLC*RLGLQPDCTAASYS
Trigger: AGAGTACGATGCTGCAGTACAATCTGGCTGGAGACCTAGCCTCCAGCAAAGACCCGGCCGGCACTTCCCACCCTTAACCGAAAACGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566442.5
CDS CCA 90 bp AGGTTGGGAAGCCACGTGTGCATGGTAGAACAGAGAATACCAATATaGCAGGAGGCCATAGCGCTCTCTGATGGCTTCTCGGATGAGTCG +
Preference number: 5 (lower is better)
Translates to: RLGSHVCMVEQRIPI*QEAIALSDGFSDES
Trigger: CGACTCATCCGAGAAGCCATCAGAGAGCGCTATGGCCTCCTGCCATATTGGTATTCTCTGTTCTACCATGCACACGTGGCTTCCCAACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR CAA 90 bp ATCTCGGTTACTCAGGATGCTGAGGCAGAAGAATCGCTTGAACCCGGAAAGCAGGTGGCCGTTAGCAAGTaGCTAAGTGGAGGAAGCCTG +
Preference number: 5 (lower is better)
Translates to: ISVTQDAEAEESLEPGKQVAVSK*LSGGSL
Trigger: CAGGCTTCCTCCACTTAGCAACTTGCTAACGGCCAC...CTGCTTTCCGGGTTCAAGCGATTCTTCTGCCTCAGCATCCTGAGTAACCGAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS CCA 90 bp CTAAAACCTTTAACGGCTGGGAGACAGAAAAGACTCAGGCCAGGCTaGCATGTAGCGATCTCTCTAACCCAGCTGACCAGGTTCCAACAG +
Preference number: 5 (lower is better)
Translates to: LKPLTAGRQKRLRPG*HVAISLTQLTRFQQ
Trigger: CTGTTGGAACCTGGTCAGCTGGGTTAGAGAGATCGCTACATGCCAGCCTGGCCTGAGTCTTTTCTGTCTCCCAGCCGTTAAAGGTTTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561871.1
CDS-3UTR CAA 90 bp CGATCTCTAGGGGAGAATAACTCCCACGGCTGCAGCGTATGCAGTGCACACAGACAACTCAGCCCCATGTaGCTCTCTGGTACACAAATT +
Preference number: 5 (lower is better)
Translates to: RSLGENNSHGCSVCSAHRQLSPM*LSGTQI
Trigger: AATTTGTGTACCAGAGAGCAACATGGGGCTGAGTTG...TCTGTGTGCACTGCATACGCTGCAGCCGTGGGAGTTATTCTCCCCTAGAGATCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS CCA 90 bp CCAGTGCACATGAGTGCGAGATCTGACCTTTTGTTTAGCAGCAACTaGGCCCATCTGGGTCAGTGTGTACTCTACTGCAGGCTCTGTATT +
Preference number: 5 (lower is better)
Translates to: PVHMSARSDLLFSSN*AHLGQCVLYCRLCI
Trigger: AATACAGAGCCTGCAGTAGAGTACACACTGACCCAGATGGGCCCAGTTGCTGCTAAACAAAAGGTCAGATCTCGCACTCATGTGCACTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318010.12
ENST00000566442.5
ENST00000567421.1
CDS-3UTR CAA 90 bp ATCTCGGTTACTCAGGATGCTGAGGCAGAAGAATCGCTTGAACCCGGAAAGCAGACTGCAGGCTCTGTATaGATCTCCACCAGTGTTTCC +
Preference number: 5 (lower is better)
Translates to: ISVTQDAEAEESLEPGKQTAGSV*ISTSVS
Trigger: GGAAACACTGGTGGAGATCAATACAGAGCCTGCAGT...CTGCTTTCCGGGTTCAAGCGATTCTTCTGCCTCAGCATCCTGAGTAACCGAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR CAA 90 bp CCTGTAGGCCAACTCAGCCCCATGTTGCTCTCTGGTACACAAATTCAGAAATGGGCGAGATCTGACCTTTaGTTTAGCAGCAACTGGGCC +
Preference number: 5 (lower is better)
Translates to: PVGQLSPMLLSGTQIQKWARSDL*FSSNWA
Trigger: GGCCCAGTTGCTGCTAAACAAAAGGTCAGATCTCGC...CCATTTCTGAATTTGTGTACCAGAGAGCAACATGGGGCTGAGTTGGCCTACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR CAA 90 bp CCTGTAGGCCAACTCAGCCCCATGTTGCTCTCTGGTACACAAATTCAGAAATGGCAGTCAGTGGCAATGTaGAGTGAGAGCTTCTCCAGG +
Preference number: 5 (lower is better)
Translates to: PVGQLSPMLLSGTQIQKWQSVAM*SESFSR
Trigger: CCTGGAGAAGCTCTCACTCAACATTGCCACTGACTG...CCATTTCTGAATTTGTGTACCAGAGAGCAACATGGGGCTGAGTTGGCCTACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR CAA 90 bp TACCTCTCATTCATTAAGTGCCTACTGGGAGCTAGCCACTTCACAGAGACCTTTGCTGCCCAGGTAGGCTaGGCCCACGTTAAAACAGAC +
Preference number: 5 (lower is better)
Translates to: YLSFIKCLLGASHFTETFAAQVG*AHVKTD
Trigger: GTCTGTTTTAACGTGGGCCAAGCCTACCTGGGCAGC...AAAGGTCTCTGTGAAGTGGCTAGCTCCCAGTAGGCACTTAATGAATGAGAGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR CAA 90 bp CCCTTCGAGGGTTTGGTAGGTGGAAATCCTAGGAATCTCATTACTAAGGCTTTCGAGGCTGCTGTCCACTaGGACACTGGCCTTGAGCAA +
Preference number: 5 (lower is better)
Translates to: PFEGLVGGNPRNLITKAFEAAVH*DTGLEQ
Trigger: TTGCTCAAGGCCAGTGTCCAAGTGGACAGCAGCCTC...GAAAGCCTTAGTAATGAGATTCCTAGGATTTCCACCTACCAAACCCTCGAAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR CAA 90 bp ATATCTGTGGCTGGAATGGTTTCTGCTGCACAGCATTGCCAACTAATGGCTCTGACCAGGGGCAGTTCTTaGTCATATGATGCGGACCTC +
Preference number: 5 (lower is better)
Translates to: ISVAGMVSAAQHCQLMALTRGSS*SYDADL
Trigger: GAGGTCCGCATCATATGACAAAGAACTGCCCCTGGT...CAGAGCCATTAGTTGGCAATGCTGTGCAGCAGAAACCATTCCAGCCACAGATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR CAA 90 bp CCTGTAGGCCAACTCAGCCCCATGTTGCTCTCTGGTACACAAATTCAGAAATGGCCAGGCTGTCTCCACTaGTCTCTAGCCAAATGTTTC +
Preference number: 5 (lower is better)
Translates to: PVGQLSPMLLSGTQIQKWPGCLH*SLAKCF
Trigger: GAAACATTTGGCTAGAGACAAGTGGAGACAGCCTGG...CCATTTCTGAATTTGTGTACCAGAGAGCAACATGGGGCTGAGTTGGCCTACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR CAA 90 bp ATCTCGGTTACTCAGGATGCTGAGGCAGAAGAATCGCTTGAACCCGGAAAGCAGGATCCCATTCCAATGTaGCCAACTGTTCCAACAGAG +
Preference number: 5 (lower is better)
Translates to: ISVTQDAEAEESLEPGKQDPIPM*PTVPTE
Trigger: CTCTGTTGGAACAGTTGGCAACATTGGAATGGGATC...CTGCTTTCCGGGTTCAAGCGATTCTTCTGCCTCAGCATCCTGAGTAACCGAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR CAA 90 bp TTGATCTTGCTTTTCCTGAGGCACCAGGACTCTTCACTGTTATGTAAAGAACTGAGGCATCCAGAGTTGTaGGGCTCTGGTCCTGGCACC +
Preference number: 5 (lower is better)
Translates to: LILLFLRHQDSSLLCKELRHPEL*GSGPGT
Trigger: GGTGCCAGGACCAGAGCCCAACAACTCTGGATGCCT...CAGTTCTTTACATAACAGTGAAGAGTCCTGGTGCCTCAGGAAAAGCAAGATCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440615.6
CDS-3UTR CAA 90 bp ACAAGCTCAGATAGAAATCCCCACTATACGCACAAAGCTGGATTCAAATTATTCGTGCCGGCCGGGTCTTaGCTGGAGGCTAGGTCTCCA +
Preference number: 5 (lower is better)
Translates to: TSSDRNPHYTHKAGFKLFVPAGS*LEARSP
Trigger: TGGAGACCTAGCCTCCAGCAAAGACCCGGCCGGCAC...GAATAATTTGAATCCAGCTTTGTGCGTATAGTGGGGATTTCTATCTGAGCTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566442.5
CDS TCA 90 bp TCTTTGTCATATGATGCGGACCTCCCAGTCAGTGGCAATGTTGAGTaGGAGCTTCTCCAGGCTCAGGATGGATGTTTTGGCACAATACGT +
Preference number: 5 (lower is better)
Translates to: SLSYDADLPVSGNVE*ELLQAQDGCFGTIR
Trigger: ACGTATTGTGCCAAAACATCCATCCTGAGCCTGGAGAAGCTCTCACTCAACATTGCCACTGACTGGGAGGTCCGCATCATATGACAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR CAA 90 bp GCTGCCTGTTCCTGGCCATTTCTGCAGACACAGTACTGGCTAATAAGCGGTAGTTGCTTCATTGATGATTaGGAACCTGGTGCTGTCTTC +
Preference number: 5 (lower is better)
Translates to: AACSWPFLQTQYWLISGSCFIDD*EPGAVF
Trigger: GAAGACAGCACCAGGTTCCAAATCATCAATGAAGCA...ACTACCGCTTATTAGCCAGTACTGTGTCTGCAGAAATGGCCAGGAACAGGCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570013.5
CDS-3UTR CAA 90 bp AGCCCCATGTTGCTCTCTGGTACACAAATTCAGAAATGGGAGGTAGGTAAAGTGCAGGTGAAGTACCTCTaGCCCTCAGTGTGCTCTATG +
Preference number: 5 (lower is better)
Translates to: SPMLLSGTQIQKWEVGKVQVKYL*PSVCSM
Trigger: CATAGAGCACACTGAGGGCAAGAGGTACTTCACCTG...CACTTTACCTACCTCCCATTTCTGAATTTGTGTACCAGAGAGCAACATGGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR CAA 90 bp CCTGTAGGCCAACTCAGCCCCATGTTGCTCTCTGGTACACAAATTCAGAAATGGATTCTTCTGCATGGTTaGCTCTGGCCCTCTAAAGAC +
Preference number: 5 (lower is better)
Translates to: PVGQLSPMLLSGTQIQKWILLHG*LWPSKD
Trigger: GTCTTTAGAGGGCCAGAGCAAACCATGCAGAAGAAT...CCATTTCTGAATTTGTGTACCAGAGAGCAACATGGGGCTGAGTTGGCCTACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR CAA 90 bp AGAATGCTAGCTATATGGCCTCCATTGTCAGTGGCTAATATGATAGCCTGTTTCAGGCCTCATGACAGGTaGGGAAGCCACGTGTGCATG +
Preference number: 5 (lower is better)
Translates to: RMLAIWPPLSVANMIACFRPHDR*GSHVCM
Trigger: CATGCACACGTGGCTTCCCAACCTGTCATGAGGCCT...GAAACAGGCTATCATATTAGCCACTGACAATGGAGGCCATATAGCTAGCATTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR CAA 90 bp GGAGCCACTGAGGTCTGTGGAGCCTTGGGCACCATGACACGACTGGTATGTTGTTGGATTTTCCTACAGTaGTCTTTATTGGTATCACAC +
Preference number: 5 (lower is better)
Translates to: GATEVCGALGTMTRLVCCWIFLQ*SLLVSH
Trigger: GTGTGATACCAATAAAGACAACTGTAGGAAAATCCA...ACAACATACCAGTCGTGTCATGGTGCCCAAGGCTCCACAGACCTCAGTGGCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR CAA 90 bp CAAAGGGCAGATAATGAACACATAAACAACTGCACATTTCAATTCCCAGAAGCCGAGGTCTGTGGAGCCTaGGGCACCATGACACGACTG +
Preference number: 5 (lower is better)
Translates to: QRADNEHINNCTFQFPEAEVCGA*GTMTRL
Trigger: CAGTCGTGTCATGGTGCCCAAGGCTCCACAGACCTC...GGCTTCTGGGAATTGAAATGTGCAGTTGTTTATGTGTTCATTATCTGCCCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR CAA 90 bp AGAATGCTAGCTATATGGCCTCCATTGTCAGTGGCTAATATGATAGCCTGTTTCAAGGGCAGGAGGATATaGGCGCCCAGGGATCAGAAG +
Preference number: 5 (lower is better)
Translates to: RMLAIWPPLSVANMIACFKGRRI*APRDQK
Trigger: CTTCTGATCCCTGGGCGCCAATATCCTCCTGCCCTT...GAAACAGGCTATCATATTAGCCACTGACAATGGAGGCCATATAGCTAGCATTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS TCA 90 bp TCTGGGAAGGGAGTCCCCTCCAGATTCTCATGGAGTGACAAATCTTaGCTCTTGCTCCTGGAATTTTTCAGGCCCAAACTAGCGTTTCTA +
Preference number: 5 (lower is better)
Translates to: SGKGVPSRFSWSDKS*LLLLEFFRPKLAFL
Trigger: TAGAAACGCTAGTTTGGGCCTGAAAAATTCCAGGAGCAAGAGTCAAGATTTGTCACTCCATGAGAATCTGGAGGGGACTCCCTTCCCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318010.12
ENST00000440615.6
ENST00000561871.1
ENST00000562170.5
ENST00000562859.5
ENST00000566442.5
ENST00000567784.5
ENST00000570013.5
CDS TCA 90 bp TCGTCAAGTTTCTGGGAAGGGAGTCCCCTCCAGATTCTCATGGAGTaGCAAATCTTGACTCTTGCTCCTGGAATTTTTCAGGCCCAAACT +
Preference number: 5 (lower is better)
Translates to: SSSFWEGSPLQILME*QILTLAPGIFQAQT
Trigger: AGTTTGGGCCTGAAAAATTCCAGGAGCAAGAGTCAAGATTTGTCACTCCATGAGAATCTGGAGGGGACTCCCTTCCCAGAAACTTGACGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318010.12
ENST00000440615.6
ENST00000561871.1
ENST00000562170.5
ENST00000562859.5
ENST00000566442.5
ENST00000567784.5
ENST00000570013.5
CDS GCA 90 bp CATGGCATCATAAGGAATGTCATGCTCATCAAACCCTGCATCCACTaGTTTTACATCCTGCTCATCTTCATAGTTCCAGCGGCACTGGTG +
Preference number: 5 (lower is better)
Translates to: HGIIRNVMLIKPCIH*FYILLIFIVPAALV
Trigger: CACCAGTGCCGCTGGAACTATGAAGATGAGCAGGATGTAAAAGCAGTGGATGCAGGGTTTGATGAGCATGACATTCCTTATGATGCCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318010.12
ENST00000567421.1
CDS GCA 90 bp GTCCAGCCACATGGCATCATAAGGAATGTCATGCTCATCAAACCCTaGATCCACTGCTTTTACATCCTGCTCATCTTCATAGTTCCAGCG +
Preference number: 5 (lower is better)
Translates to: VQPHGIIRNVMLIKP*IHCFYILLIFIVPA
Trigger: CGCTGGAACTATGAAGATGAGCAGGATGTAAAAGCAGTGGATGCAGGGTTTGATGAGCATGACATTCCTTATGATGCCATGTGGCTGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318010.12
ENST00000567421.1
CDS GCA 90 bp GATGATAAAAACCGTAGATGTTGTGGAGCTCTCTGTGCTCCCAATTaGCATGATGAATGGCATTCTTCTGCATGGTTTGCTCTGGCCCTC +
Preference number: 5 (lower is better)
Translates to: DDKNRRCCGALCAPN*HDEWHSSAWFALAL
Trigger: GAGGGCCAGAGCAAACCATGCAGAAGAATGCCATTCATCATGGCAATTGGGAGCACAGAGAGCTCCACAACATCTACGGTTTTTATCATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS GCA 90 bp CATGATAAAAACCGTAGATGTTGTGGAGCTCTCTGTGCTCCCAATTaGCATGATGAATGGCATTCTTCTGCATGGTTTGCTCTGGCCCTC +
Preference number: 5 (lower is better)
Translates to: HDKNRRCCGALCAPN*HDEWHSSAWFALAL
Trigger: GAGGGCCAGAGCAAACCATGCAGAAGAATGCCATTCATCATGGCAATTGGGAGCACAGAGAGCTCCACAACATCTACGGTTTTTATCATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568953.1
CDS CCA 90 bp GCCACCTCTACCAGCTGTGATCAAGACCTCCCGGGATCCAGAGGATaGTCTAATAGTTCATTAAATTGCTGTAGGACACTAATTGTCCCT +
Preference number: 5 (lower is better)
Translates to: ATSTSCDQDLPGSRG*SNSSLNCCRTLIVP
Trigger: AGGGACAATTAGTGTCCTACAGCAATTTAATGAACTATTAGACCATCCTCTGGATCCCGGGAGGTCTTGATCACAGCTGGTAGAGGTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440615.6
CDS-3UTR CAA 90 bp AGCCCCATGTTGCTCTCTGGTACACAAATTCAGAAATGGGAGGTAGGTAAAGTGCAGGCCCAGATCTTCTaGATTTTCCTGAGAGGTGTC +
Preference number: 5 (lower is better)
Translates to: SPMLLSGTQIQKWEVGKVQAQIF*IFLRGV
Trigger: GACACCTCTCAGGAAAATCAAGAAGATCTGGGCCTG...CACTTTACCTACCTCCCATTTCTGAATTTGTGTACCAGAGAGCAACATGGGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR CAA 90 bp CAAAGGGCAGATAATGAACACATAAACAACTGCACATTTCAATTCCCAGAAGCCGCTCCTGAGCAGCTCTaGCATCCTCTTGGGGTTTGG +
Preference number: 5 (lower is better)
Translates to: QRADNEHINNCTFQFPEAAPEQL*HPLGVW
Trigger: CCAAACCCCAAGAGGATGCAAGAGCTGCTCAGGAGC...GGCTTCTGGGAATTGAAATGTGCAGTTGTTTATGTGTTCATTATCTGCCCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR CAA 90 bp ATCTCGGTTACTCAGGATGCTGAGGCAGAAGAATCGCTTGAACCCGGAAAGCAGTGGTCAGCAAAACTATaGATCAGAACACTGGAACAG +
Preference number: 5 (lower is better)
Translates to: ISVTQDAEAEESLEPGKQWSAKL*IRTLEQ
Trigger: CTGTTCCAGTGTTCTGATCAATAGTTTTGCTGACCA...CTGCTTTCCGGGTTCAAGCGATTCTTCTGCCTCAGCATCCTGAGTAACCGAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR CAA 90 bp CTTGGTAGGTTGATCTTGCTTTTCCTGAGGCACCAGGACTCTTCACTGTTATGTAAGCTGCTGGAAGTGTaGTCTCTGGTGAAACCTTGC +
Preference number: 5 (lower is better)
Translates to: LGRLILLFLRHQDSSLLCKLLEV*SLVKPC
Trigger: GCAAGGTTTCACCAGAGACAACACTTCCAGCAGCTT...ACATAACAGTGAAGAGTCCTGGTGCCTCAGGAAAAGCAAGATCAACCTACCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440615.6
CDS TCA 90 bp AATTGTCCCTTCTACAGTTGCAGCCAGTTGGTTTATTGCAAGCACTaGTTTTCTACAAAGAATACTGGCAACCTCACGCTGGGCACTGGC +
Preference number: 5 (lower is better)
Translates to: NCPFYSCSQLVYCKH*FSTKNTGNLTLGTG
Trigger: GCCAGTGCCCAGCGTGAGGTTGCCAGTATTCTTTGTAGAAAATCAGTGCTTGCAATAAACCAACTGGCTGCAACTGTAGAAGGGACAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440615.6
CDS GCA 90 bp CAAGACCTCCCGGGATCCAGAGGATGGTCTAATAGTTCATTAAATTaGTGTAGGACACTAATTGTCCCTTCTACAGTTGCAGCCAGTTGG +
Preference number: 5 (lower is better)
Translates to: QDLPGSRGWSNSSLN*CRTLIVPSTVAASW
Trigger: CCAACTGGCTGCAACTGTAGAAGGGACAATTAGTGTCCTACAGCAATTTAATGAACTATTAGACCATCCTCTGGATCCCGGGAGGTCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440615.6
CDS CCA 90 bp TCGGAAAGGGAGCCAGTTCCTCTTAATGGGAACCCACCACTTTGCTaGAATCAACTTGAGAAATTCTCAGCAAAAATATCTGGCAGGGCA +
Preference number: 5 (lower is better)
Translates to: SEREPVPLNGNPPLC*NQLEKFSAKISGRA
Trigger: TGCCCTGCCAGATATTTTTGCTGAGAATTTCTCAAGTTGATTCCAGCAAAGTGGTGGGTTCCCATTAAGAGGAACTGGCTCCCTTTCCGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566690.1
CDS-3UTR CAA 90 bp ATCTCGGTTACTCAGGATGCTGAGGCAGAAGAATCGCTTGAACCCGGAAAGCAGAAACAGAACATGCTCTaGAGGGACATACAATCTAGT +
Preference number: 5 (lower is better)
Translates to: ISVTQDAEAEESLEPGKQKQNML*RDIQSS
Trigger: ACTAGATTGTATGTCCCTCAAGAGCATGTTCTGTTT...CTGCTTTCCGGGTTCAAGCGATTCTTCTGCCTCAGCATCCTGAGTAACCGAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR CAA 90 bp TGGTGCAGAGCTCAAATCTCAACTCATACTATGAAATGTGTCCACAAGGAAATGGTCAAGAAGCAGCTGTaGCACTTTGGGAGGCAGAGG +
Preference number: 5 (lower is better)
Translates to: WCRAQISTHTMKCVHKEMVKKQL*HFGRQR
Trigger: CCTCTGCCTCCCAAAGTGCAACAGCTGCTTCTTGAC...CATTTCCTTGTGGACACATTTCATAGTATGAGTTGAGATTTGAGCTCTGCACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR CAA 90 bp TTGCTTTTCCTGAGGCACCAGGACTCTTCACTGTTATGTAAAGAACTGTTAACCCTCCTCAGCTTCCTTTaGAGCCAGGTGCTGTCTTGT +
Preference number: 5 (lower is better)
Translates to: LLFLRHQDSSLLCKELLTLLSFL*SQVLSC
Trigger: ACAAGACAGCACCTGGCTCAAAAGGAAGCTGAGGAG...GGTTAACAGTTCTTTACATAACAGTGAAGAGTCCTGGTGCCTCAGGAAAAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440615.6
CDS-3UTR CAA 90 bp CTGTTTCTGACGCCAGGCATTCACTGTAGACTTCCCTCTAGATACCTGTTCAGAGGCTTACTTGCTTCATaGATGATTTGGAACCTGGTG +
Preference number: 5 (lower is better)
Translates to: LFLTPGIHCRLPSRYLFRGLLAS*MIWNLV
Trigger: CACCAGGTTCCAAATCATCAATGAAGCAAGTAAGCC...TCTGAACAGGTATCTAGAGGGAAGTCTACAGTGAATGCCTGGCGTCAGAAACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570013.5
CDS GCA 90 bp AAGTCGGAAAGGGAGCCAGTTCCTCTTAATGGGAACCCACCACTTTaGTGGAATCAACTTGAGAAATTCTCAGCAAAAATATCTGGCAGG +
Preference number: 5 (lower is better)
Translates to: KSEREPVPLNGNPPL*WNQLEKFSAKISGR
Trigger: CCTGCCAGATATTTTTGCTGAGAATTTCTCAAGTTGATTCCAGCAAAGTGGTGGGTTCCCATTAAGAGGAACTGGCTCCCTTTCCGACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566690.1
CDS-3UTR CAA 90 bp ATCTCGGTTACTCAGGATGCTGAGGCAGAAGAATCGCTTGAACCCGGAAAGCAGTTCTGCAGTAGCCATTaGATGATAAAAACCGTAGAT +
Preference number: 5 (lower is better)
Translates to: ISVTQDAEAEESLEPGKQFCSSH*MIKTVD
Trigger: ATCTACGGTTTTTATCATCAAATGGCTACTGCAGAA...CTGCTTTCCGGGTTCAAGCGATTCTTCTGCCTCAGCATCCTGAGTAACCGAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR CAA 90 bp ATCTCGGTTACTCAGGATGCTGAGGCAGAAGAATCGCTTGAACCCGGAAAGCAGCTTGACATTTACATCTaGAAGGAAAGACACACTATG +
Preference number: 5 (lower is better)
Translates to: ISVTQDAEAEESLEPGKQLDIYI*KERHTM
Trigger: CATAGTGTGTCTTTCCTTCAAGATGTAAATGTCAAG...CTGCTTTCCGGGTTCAAGCGATTCTTCTGCCTCAGCATCCTGAGTAACCGAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR CAA 90 bp TTGCTTTTCCTGAGGCACCAGGACTCTTCACTGTTATGTAAAGAACTGTTAACCCTTGGTAGGTTGATCTaGCTTTTCCTGAGGCACCAG +
Preference number: 5 (lower is better)
Translates to: LLFLRHQDSSLLCKELLTLGRLI*LFLRHQ
Trigger: CTGGTGCCTCAGGAAAAGCAAGATCAACCTACCAAG...GGTTAACAGTTCTTTACATAACAGTGAAGAGTCCTGGTGCCTCAGGAAAAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440615.6
CDS-3UTR CAA 90 bp GCAAACAGGCTTACTTGCTTCATTGATGATTTGGAACCTGGTGCTGTCTTCATCGTCTCTGGTGAAACCTaGCAAACAGGCTTACTTGCT +
Preference number: 5 (lower is better)
Translates to: ANRLTCFIDDLEPGAVFIVSGET*QTGLLA
Trigger: AGCAAGTAAGCCTGTTTGCAAGGTTTCACCAGAGAC...GATGAAGACAGCACCAGGTTCCAAATCATCAATGAAGCAAGTAAGCCTGTTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570013.5
CDS TCA 90 bp CTGATTCTTCACAAAGAAGCCCTGATCTTTGGCCTTCACATATACTaGGTAGTCAGGATCAATCTTGATGTGGGGATCACTGATGACCAC +
Preference number: 5 (lower is better)
Translates to: LILHKEALIFGLHIY*VVRINLDVGITDDH
Trigger: GTGGTCATCAGTGATCCCCACATCAAGATTGATCCTGACTACTCAGTATATGTGAAGGCCAAAGATCAGGGCTTCTTTGTGAAGAATCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318010.12
ENST00000567421.1
ENST00000568953.1
CDS TCA 90 bp GAGGATGTCCGTAGATCCCTGATAAACAGGGAAAGCAAAAAGACTTaGATACCACTCTCTGACCTTGGGATTGGTGAAATCCAGGTAAGA +
Preference number: 5 (lower is better)
Translates to: EDVRRSLINRESKKT*IPLSDLGIGEIQVR
Trigger: TCTTACCTGGATTTCACCAATCCCAAGGTCAGAGAGTGGTATTCAAGTCTTTTTGCTTTCCCTGTTTATCAGGGATCTACGGACATCCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318010.12
ENST00000568953.1
CDS CCA 90 bp TATGCTAATCACAACCTCTTCTTCAGACACCAAGTCTACCTTGAATaGGTTTGCTGTGATATGGCACTTCAGGTCTCCTTTTCCATCTGC +
Preference number: 5 (lower is better)
Translates to: YANHNLFFRHQVYLE*VCCDMALQVSFSIC
Trigger: GCAGATGGAAAAGGAGACCTGAAGTGCCATATCACAGCAAACCCATTCAAGGTAGACTTGGTGTCTGAAGAAGAGGTTGTGATTAGCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318010.12
ENST00000566442.5
ENST00000567421.1
CDS CCA 90 bp GGATTCAGTCATCCAGCCTGTGGATTTTCCTACAGTTGTCTTTATTaGTATCACACTTCCACCTCGCTGAAACACTGGAATAGTGTCCAA +
Preference number: 5 (lower is better)
Translates to: GFSHPACGFSYSCLY*YHTSTSLKHWNSVQ
Trigger: TTGGACACTATTCCAGTGTTTCAGCGAGGTGGAAGTGTGATACCAATAAAGACAACTGTAGGAAAATCCACAGGCTGGATGACTGAATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318010.12
ENST00000566690.1
ENST00000567596.5
CDS-3UTR CAA 90 bp CTGAATCCAATAATGCCTGATAGGTGGACTTCTTGGAAAGCCACTGTTTCTGACTGCTTCATTGATGATTaGGAACCTGGTGCTGTCTTC +
Preference number: 5 (lower is better)
Translates to: LNPIMPDRWTSWKATVSDCFIDD*EPGAVF
Trigger: GAAGACAGCACCAGGTTCCAAATCATCAATGAAGCA...GTCAGAAACAGTGGCTTTCCAAGAAGTCCACCTATCAGGCATTATTGGATTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567784.5
ENST00000570013.5
CDS-3UTR CAA 90 bp TTCAACTCCCAGTGTTTATGTGCTTTGACTGTGTTTCTGCTGCTTATCATTTTGCTTACAGTGCTTGGCTaGCTTGTGAGGACATCCGGA +
Preference number: 5 (lower is better)
Translates to: FNSQCLCALTVFLLLIILLTVLG*LVRTSG
Trigger: TCCGGATGTCCTCACAAGCAAGCCAAGCACTGTAAG...CAAAATGATAAGCAGCAGAAACACAGTCAAAGCACATAAACACTGGGAGTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR CAA 90 bp ACAAGCTCAGATAGAAATCCCCACTATACGCACAAAGCTGGATTCAAATTATTCCTTACAGTGCTTGGCTaGCTTGTGAGGACATCCGGA +
Preference number: 5 (lower is better)
Translates to: TSSDRNPHYTHKAGFKLFLTVLG*LVRTSG
Trigger: TCCGGATGTCCTCACAAGCAAGCCAAGCACTGTAAG...GAATAATTTGAATCCAGCTTTGTGCGTATAGTGGGGATTTCTATCTGAGCTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566442.5
CDS-3UTR CAA 90 bp ACAAGCTCAGATAGAAATCCCCACTATACGCACAAAGCTGGATTCAAATTATTCGCGAGATCTGACCTTTaGTTTAGCAGCAACTGGGCC +
Preference number: 5 (lower is better)
Translates to: TSSDRNPHYTHKAGFKLFARSDL*FSSNWA
Trigger: GGCCCAGTTGCTGCTAAACAAAAGGTCAGATCTCGC...GAATAATTTGAATCCAGCTTTGTGCGTATAGTGGGGATTTCTATCTGAGCTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566442.5
CDS-3UTR CAA 90 bp TACCTCTCATTCATTAAGTGCCTACTGGGAGCTAGCCACTTCACAGAGACCTTTAGGTGTGAGTACTGTTaGAAGACATCAGAAGGTGTA +
Preference number: 5 (lower is better)
Translates to: YLSFIKCLLGASHFTETFRCEYC*KTSEGV
Trigger: TACACCTTCTGATGTCTTCAAACAGTACTCACACCT...AAAGGTCTCTGTGAAGTGGCTAGCTCCCAGTAGGCACTTAATGAATGAGAGGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR CAA 90 bp CAAAGGGCAGATAATGAACACATAAACAACTGCACATTTCAATTCCCAGAAGCCACAAGCTTACGCTTTTaGCTCCTGAGCAGCTCTTGC +
Preference number: 5 (lower is better)
Translates to: QRADNEHINNCTFQFPEATSLRF*LLSSSC
Trigger: GCAAGAGCTGCTCAGGAGCAAAAAGCGTAAGCTTGT...GGCTTCTGGGAATTGAAATGTGCAGTTGTTTATGTGTTCATTATCTGCCCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR CAA 90 bp GACAAAGTGAAGGAATTCTGCACACAGACCAAACTCCAGAATTGTATTTTTCTTACTTGGACACTGGCCTaGAGCAACTCAGCTGCTGCA +
Preference number: 5 (lower is better)
Translates to: DKVKEFCTQTKLQNCIFLTWTLA*SNSAAA
Trigger: TGCAGCAGCTGAGTTGCTCAAGGCCAGTGTCCAAGT...AAGAAAAATACAATTCTGGAGTTTGGTCTGTGTGCAGAATTCCTTCACTTTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR CAA 90 bp AGGCTGTCTCCACTTGTCTCTAGCCAAATGTTTCAATATAGATTTGGGTCAAAAAGGCAGGAGGATTGTTaGAGTCCGGGAGTTCAAGAC +
Preference number: 5 (lower is better)
Translates to: RLSPLVSSQMFQYRFGSKRQEDC*SPGVQD
Trigger: GTCTTGAACTCCCGGACTCAAACAATCCTCCTGCCT...TTTTGACCCAAATCTATATTGAAACATTTGGCTAGAGACAAGTGGAGACAGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR CAA 90 bp AGCCCCATGTTGCTCTCTGGTACACAAATTCAGAAATGGGAGGTAGGTAAAGTGGCTATATGGCCTCCATaGTCAGTGGCTAATATGATA +
Preference number: 5 (lower is better)
Translates to: SPMLLSGTQIQKWEVGKVAIWPP*SVANMI
Trigger: TATCATATTAGCCACTGACAATGGAGGCCATATAGC...CACTTTACCTACCTCCCATTTCTGAATTTGTGTACCAGAGAGCAACATGGGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR CAA 90 bp AGGCTGTCTCCACTTGTCTCTAGCCAAATGTTTCAATATAGATTTGGGTCAAAAAGGCAGAAGAATCGCTaGAACCCGGAAAGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: RLSPLVSSQMFQYRFGSKRQKNR*NPESRG
Trigger: ACCTCTGCTTTCCGGGTTCAAGCGATTCTTCTGCCT...TTTTGACCCAAATCTATATTGAAACATTTGGCTAGAGACAAGTGGAGACAGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR CAA 90 bp TTGATCTTGCTTTTCCTGAGGCACCAGGACTCTTCACTGTTATGTAAAGAACTGTCAAAGTTCTCAGTCTaGGGAGCTACGTTGCTGATG +
Preference number: 5 (lower is better)
Translates to: LILLFLRHQDSSLLCKELSKFSV*GATLLM
Trigger: CATCAGCAACGTAGCTCCCAAGACTGAGAACTTTGA...CAGTTCTTTACATAACAGTGAAGAGTCCTGGTGCCTCAGGAAAAGCAAGATCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440615.6
CDS-3UTR CAA 90 bp ACAAGCTCAGATAGAAATCCCCACTATACGCACAAAGCTGGATTCAAATTATTCAGGTCTCCAGCCAGATaGTACTGCAGCATCGTACTC +
Preference number: 5 (lower is better)
Translates to: TSSDRNPHYTHKAGFKLFRSPAR*YCSIVL
Trigger: GAGTACGATGCTGCAGTACAATCTGGCTGGAGACCT...GAATAATTTGAATCCAGCTTTGTGCGTATAGTGGGGATTTCTATCTGAGCTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566442.5
CDS TCA 90 bp TTGATCCTGGAAGAAACACATCAACTGTGGTGGCTTTTGGTTCTGTaGCTGGATGAACCAATAATGCACTCCCCAGCATGTATTCATCTT +
Preference number: 5 (lower is better)
Translates to: LILEETHQLWWLLVL*LDEPIMHSPACIHL
Trigger: AAGATGAATACATGCTGGGGAGTGCATTATTGGTTCATCCAGTCACAGAACCAAAAGCCACCACAGTTGATGTGTTTCTTCCAGGATCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS GCA 90 bp AATCACAACCTCTTCTTCAGACACCAAGTCTACCTTGAATGGGTTTaGTGTGATATGGCACTTCAGGTCTCCTTTTCCATCTGCCAATAT +
Preference number: 5 (lower is better)
Translates to: NHNLFFRHQVYLEWV*CDMALQVSFSICQY
Trigger: ATATTGGCAGATGGAAAAGGAGACCTGAAGTGCCATATCACAGCAAACCCATTCAAGGTAGACTTGGTGTCTGAAGAAGAGGTTGTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318010.12
ENST00000566442.5
ENST00000567421.1
CDS-3UTR CAA 90 bp ACAAGCTCAGATAGAAATCCCCACTATACGCACAAAGCTGGATTCAAATTATTCCAGGCCCAGATCTTCTaGATTTTCCTGAGAGGTGTC +
Preference number: 5 (lower is better)
Translates to: TSSDRNPHYTHKAGFKLFQAQIF*IFLRGV
Trigger: GACACCTCTCAGGAAAATCAAGAAGATCTGGGCCTG...GAATAATTTGAATCCAGCTTTGTGCGTATAGTGGGGATTTCTATCTGAGCTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566442.5
CDS-3UTR CAA 90 bp TACCTCTCATTCATTAAGTGCCTACTGGGAGCTAGCCACTTCACAGAGACCTTTGAAGGGCCATTAGCTTaGATATCCACAAATTTTCCA +
Preference number: 5 (lower is better)
Translates to: YLSFIKCLLGASHFTETFEGPLA*ISTNFP
Trigger: TGGAAAATTTGTGGATATCAAAGCTAATGGCCCTTC...AAAGGTCTCTGTGAAGTGGCTAGCTCCCAGTAGGCACTTAATGAATGAGAGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR CAA 90 bp ACAAGCTCAGATAGAAATCCCCACTATACGCACAAAGCTGGATTCAAATTATTCACTGCAGGCTCTGTATaGATCTCCACCAGTGTTTCC +
Preference number: 5 (lower is better)
Translates to: TSSDRNPHYTHKAGFKLFTAGSV*ISTSVS
Trigger: GGAAACACTGGTGGAGATCAATACAGAGCCTGCAGT...GAATAATTTGAATCCAGCTTTGTGCGTATAGTGGGGATTTCTATCTGAGCTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566442.5
CDS-3UTR CAA 90 bp TTCAACTCCCAGTGTTTATGTGCTTTGACTGTGTTTCTGCTGCTTATCATTTTGGCATCCTCTTGGGGTTaGGGAATCTGTTTTTGTCCC +
Preference number: 5 (lower is better)
Translates to: FNSQCLCALTVFLLLIILASSWG*GICFCP
Trigger: GGGACAAAAACAGATTCCCAAACCCCAAGAGGATGC...CAAAATGATAAGCAGCAGAAACACAGTCAAAGCACATAAACACTGGGAGTTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS CCA 90 bp AACTTCCTGTGCAAAAATTGCTTCTGGTGGAGGTATTGGAATGAATaGCCATCATCAAGATATAACTCACCCACTGAAGAACCCTTAGTG +
Preference number: 5 (lower is better)
Translates to: NFLCKNCFWWRYWNE*PSSRYNSPTEEPLV
Trigger: CACTAAGGGTTCTTCAGTGGGTGAGTTATATCTTGATGATGGCCATTCATTCCAATACCTCCACCAGAAGCAATTTTTGCACAGGAAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318010.12
ENST00000566690.1
ENST00000567596.5
CDS-3UTR CAA 90 bp AGAATGCTAGCTATATGGCCTCCATTGTCAGTGGCTAATATGATAGCCTGTTTCACCTTACTTGCTTCATaGATGATTTGGAACCTGGTG +
Preference number: 5 (lower is better)
Translates to: RMLAIWPPLSVANMIACFTLLAS*MIWNLV
Trigger: CACCAGGTTCCAAATCATCAATGAAGCAAGTAAGGT...GAAACAGGCTATCATATTAGCCACTGACAATGGAGGCCATATAGCTAGCATTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR CAA 90 bp AGAGGAACCTTACTTGCTTCATTGATGATTTGGAACCTGGTGCTGTCTTCATCTACCTTACTTGCTTCATaGATGATTTGGAACCTGGTG +
Preference number: 5 (lower is better)
Translates to: RGTLLASLMIWNLVLSSSTLLAS*MIWNLV
Trigger: CACCAGGTTCCAAATCATCAATGAAGCAAGTAAGGT...AGATGAAGACAGCACCAGGTTCCAAATCATCAATGAAGCAAGTAAGGTTCCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567784.5
CDS-3UTR CAA 90 bp CAAAGGGCAGATAATGAACACATAAACAACTGCACATTTCAATTCCCAGAAGCCGACACCAAGTCTACCTaGAATGGGTTTGCTGTGATA +
Preference number: 5 (lower is better)
Translates to: QRADNEHINNCTFQFPEADTKST*NGFAVI
Trigger: TATCACAGCAAACCCATTCAAGGTAGACTTGGTGTC...GGCTTCTGGGAATTGAAATGTGCAGTTGTTTATGTGTTCATTATCTGCCCTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR CAA 90 bp AGAATGCTAGCTATATGGCCTCCATTGTCAGTGGCTAATATGATAGCCTGTTTCCTACAGTTGTCTTTATaGGTATCACACTTCCACCTC +
Preference number: 5 (lower is better)
Translates to: RMLAIWPPLSVANMIACFLQLSL*VSHFHL
Trigger: GAGGTGGAAGTGTGATACCAATAAAGACAACTGTAG...GAAACAGGCTATCATATTAGCCACTGACAATGGAGGCCATATAGCTAGCATTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR CAA 90 bp GACAAAGTGAAGGAATTCTGCACACAGACCAAACTCCAGAATTGTATTTTTCTTTTCTGCTGCACAGCATaGCCAACTAATGGCTCTGTC +
Preference number: 5 (lower is better)
Translates to: DKVKEFCTQTKLQNCIFLFCCTA*PTNGSV
Trigger: GACAGAGCCATTAGTTGGCAATGCTGTGCAGCAGAA...AAGAAAAATACAATTCTGGAGTTTGGTCTGTGTGCAGAATTCCTTCACTTTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR CAA 90 bp ACAAGCTCAGATAGAAATCCCCACTATACGCACAAAGCTGGATTCAAATTATTCATGAGGAACGTGCTTTaGTTAGGAACCGAAACTGGG +
Preference number: 5 (lower is better)
Translates to: TSSDRNPHYTHKAGFKLFMRNVL*LGTETG
Trigger: CCCAGTTTCGGTTCCTAACAAAAGCACGTTCCTCAT...GAATAATTTGAATCCAGCTTTGTGCGTATAGTGGGGATTTCTATCTGAGCTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566442.5
CDS-3UTR CAA 90 bp ACAAGCTCAGATAGAAATCCCCACTATACGCACAAAGCTGGATTCAAATTATTCGCCGAATTCCAGCCTTaGCTTAAATACCACCCAAAC +
Preference number: 5 (lower is better)
Translates to: TSSDRNPHYTHKAGFKLFAEFQP*LKYHPN
Trigger: GTTTGGGTGGTATTTAAGCAAAGGCTGGAATTCGGC...GAATAATTTGAATCCAGCTTTGTGCGTATAGTGGGGATTTCTATCTGAGCTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566442.5
CDS TCA 90 bp CTCTTGCTCCTGGAATTTTTCAGGCCCAAACTAGCGTTTCTACAATaGTTTATTTGGCAAATTTGTCTTGATTATGGGTGGCTGATGAGG +
Preference number: 5 (lower is better)
Translates to: LLLLEFFRPKLAFLQ*FIWQICLDYGWLMR
Trigger: CCTCATCAGCCACCCATAATCAAGACAAATTTGCCAAATAAATCATTGTAGAAACGCTAGTTTGGGCCTGAAAAATTCCAGGAGCAAGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000561871.1
ENST00000562170.5
ENST00000562859.5
ENST00000566442.5
CDS CCA 90 bp AATTGCTGTAGGACACTAATTGTCCCTTCTACAGTTGCAGCCAGTTaGTTTATTGCAAGCACTGATTTTCTACAAAGAATACTGGCAACC +
Preference number: 5 (lower is better)
Translates to: NCCRTLIVPSTVAAS*FIASTDFLQRILAT
Trigger: GGTTGCCAGTATTCTTTGTAGAAAATCAGTGCTTGCAATAAACCAACTGGCTGCAACTGTAGAAGGGACAATTAGTGTCCTACAGCAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440615.6
CDS-3UTR CAA 90 bp TTCAACTCCCAGTGTTTATGTGCTTTGACTGTGTTTCTGCTGCTTATCATTTTGTGCTTCATTGATGATTaGGAACCTGGTGCTGTCTTC +
Preference number: 5 (lower is better)
Translates to: FNSQCLCALTVFLLLIILCFIDD*EPGAVF
Trigger: GAAGACAGCACCAGGTTCCAAATCATCAATGAAGCA...CAAAATGATAAGCAGCAGAAACACAGTCAAAGCACATAAACACTGGGAGTTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR CAA 90 bp ACAAGCTCAGATAGAAATCCCCACTATACGCACAAAGCTGGATTCAAATTATTCTGCTTCATTGATGATTaGGAACCTGGTGCTGTCTTC +
Preference number: 5 (lower is better)
Translates to: TSSDRNPHYTHKAGFKLFCFIDD*EPGAVF
Trigger: GAAGACAGCACCAGGTTCCAAATCATCAATGAAGCA...GAATAATTTGAATCCAGCTTTGTGCGTATAGTGGGGATTTCTATCTGAGCTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566442.5
CDS-3UTR CAA 90 bp ACAAGCTCAGATAGAAATCCCCACTATACGCACAAAGCTGGATTCAAATTATTCGACACCAAGTCTACCTaGAATGGGTTTGCTGTGATA +
Preference number: 5 (lower is better)
Translates to: TSSDRNPHYTHKAGFKLFDTKST*NGFAVI
Trigger: TATCACAGCAAACCCATTCAAGGTAGACTTGGTGTC...GAATAATTTGAATCCAGCTTTGTGCGTATAGTGGGGATTTCTATCTGAGCTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566442.5
CDS-3UTR CAA 90 bp AGGCTGTCTCCACTTGTCTCTAGCCAAATGTTTCAATATAGATTTGGGTCAAAAATCATTCCACAGTCTTaGTCTCTCATGACCGTGACA +
Preference number: 5 (lower is better)
Translates to: RLSPLVSSQMFQYRFGSKIIPQS*SLMTVT
Trigger: TGTCACGGTCATGAGAGACAAAGACTGTGGAATGAT...TTTTGACCCAAATCTATATTGAAACATTTGGCTAGAGACAAGTGGAGACAGCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR CAA 90 bp AAACATCATGGTGGTAGAAATAGCTTTGTCTATGTCTTCAAGCATAGTGTTGATGTCTTGGGAGCTACGTaGCTGATGTCCCAGGTAATT +
Preference number: 5 (lower is better)
Translates to: KHHGGRNSFVYVFKHSVDVLGAT*LMSQVI
Trigger: AATTACCTGGGACATCAGCAACGTAGCTCCCAAGAC...ATCAACACTATGCTTGAAGACATAGACAAAGCTATTTCTACCACCATGATGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440615.6
CDS-3UTR CAA 90 bp AACATCATGGTGGTAGAAATAGCTTTGTCTATGTCTTCAAGCATAGTGTTGATCTGCTTCATTGATGATTaGGAACCTGGTGCTGTCTTC +
Preference number: 5 (lower is better)
Translates to: NIMVVEIALSMSSSIVLICFIDD*EPGAVF
Trigger: GAAGACAGCACCAGGTTCCAAATCATCAATGAAGCA...GATCAACACTATGCTTGAAGACATAGACAAAGCTATTTCTACCACCATGATGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440615.6
CDS-3UTR CAA 90 bp ACAAGCTCAGATAGAAATCCCCACTATACGCACAAAGCTGGATTCAAATTATTCACCTTACTTGCTTCATaGATGATTTGGAACCTGGTG +
Preference number: 5 (lower is better)
Translates to: TSSDRNPHYTHKAGFKLFTLLAS*MIWNLV
Trigger: CACCAGGTTCCAAATCATCAATGAAGCAAGTAAGGT...GAATAATTTGAATCCAGCTTTGTGCGTATAGTGGGGATTTCTATCTGAGCTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566442.5
CDS-3UTR CAA 90 bp ACAAGCTCAGATAGAAATCCCCACTATACGCACAAAGCTGGATTCAAATTATTCAGGTGTGAGTACTGTTaGAAGACATCAGAAGGTGTA +
Preference number: 5 (lower is better)
Translates to: TSSDRNPHYTHKAGFKLFRCEYC*KTSEGV
Trigger: TACACCTTCTGATGTCTTCAAACAGTACTCACACCT...GAATAATTTGAATCCAGCTTTGTGCGTATAGTGGGGATTTCTATCTGAGCTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566442.5
CDS-3UTR CAA 90 bp GACAAAGTGAAGGAATTCTGCACACAGACCAAACTCCAGAATTGTATTTTTCTTCTCAGGATGGATGTTTaGGCACAATACGTAAAAGCC +
Preference number: 5 (lower is better)
Translates to: DKVKEFCTQTKLQNCIFLLRMDV*AQYVKA
Trigger: GGCTTTTACGTATTGTGCCAAAACATCCATCCTGAG...AAGAAAAATACAATTCTGGAGTTTGGTCTGTGTGCAGAATTCCTTCACTTTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR CAA 90 bp TGGTGCAGAGCTCAAATCTCAACTCATACTATGAAATGTGTCCACAAGGAAATGGGGAAGGCAAACAGATaGCAGCAAAAATCTCAAAAA +
Preference number: 5 (lower is better)
Translates to: WCRAQISTHTMKCVHKEMGKANR*QQKSQK
Trigger: TTTTTGAGATTTTTGCTGCAATCTGTTTGCCTTCCC...CATTTCCTTGTGGACACATTTCATAGTATGAGTTGAGATTTGAGCTCTGCACCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR CAA 90 bp CAAAGGGCAGATAATGAACACATAAACAACTGCACATTTCAATTCCCAGAAGCCAAGATCTCTGTATCCTaGCATGTAAATAGTCAGGCT +
Preference number: 5 (lower is better)
Translates to: QRADNEHINNCTFQFPEAKISVS*HVNSQA
Trigger: AGCCTGACTATTTACATGCAAGGATACAGAGATCTT...GGCTTCTGGGAATTGAAATGTGCAGTTGTTTATGTGTTCATTATCTGCCCTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR CAA 90 bp AGGCTGTCTCCACTTGTCTCTAGCCAAATGTTTCAATATAGATTTGGGTCAAAACTCCTCAAACCATATTaGGGGGCACATGATATTGAT +
Preference number: 5 (lower is better)
Translates to: RLSPLVSSQMFQYRFGSKLLKPY*GAHDID
Trigger: ATCAATATCATGTGCCCCCAAATATGGTTTGAGGAG...TTTTGACCCAAATCTATATTGAAACATTTGGCTAGAGACAAGTGGAGACAGCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR CAA 90 bp TTCAACTCCCAGTGTTTATGTGCTTTGACTGTGTTTCTGCTGCTTATCATTTTGATGACCGTGACACTTTaGAAGAGTACTTGTCAGGTT +
Preference number: 5 (lower is better)
Translates to: FNSQCLCALTVFLLLIILMTVTL*KSTCQV
Trigger: AACCTGACAAGTACTCTTCAAAAGTGTCACGGTCAT...CAAAATGATAAGCAGCAGAAACACAGTCAAAGCACATAAACACTGGGAGTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR CAA 90 bp TTTGTAAACATCATGGTGGTAGAAATAGCTTTGTCTATGTCTTCAAGCATAGTGTGGACTGTGGTTTCTTaGCCTTTGAAGGCATCCAGA +
Preference number: 5 (lower is better)
Translates to: FVNIMVVEIALSMSSSIVWTVVS*PLKASR
Trigger: TCTGGATGCCTTCAAAGGCAAAGAAACCACAGTCCA...CACTATGCTTGAAGACATAGACAAAGCTATTTCTACCACCATGATGTTTACAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440615.6
CDS-3UTR CAA 90 bp AAACATCATGGTGGTAGAAATAGCTTTGTCTATGTCTTCAAGCATAGTGTTGATCCAGGTAATTTGTCCTaGTTTATCAGGCTCCTCAGC +
Preference number: 5 (lower is better)
Translates to: KHHGGRNSFVYVFKHSVDPGNLS*FIRLLS
Trigger: GCTGAGGAGCCTGATAAACAAGGACAAATTACCTGG...ATCAACACTATGCTTGAAGACATAGACAAAGCTATTTCTACCACCATGATGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440615.6
CDS-3UTR CAA 90 bp TTTGTAAACATCATGGTGGTAGAAATAGCTTTGTCTATGTCTTCAAGCATAGTGCTCTTCCTTGGTAGGTaGATCTTGCTTTTCCTGAGG +
Preference number: 5 (lower is better)
Translates to: FVNIMVVEIALSMSSSIVLFLGR*ILLFLR
Trigger: CCTCAGGAAAAGCAAGATCAACCTACCAAGGAAGAG...CACTATGCTTGAAGACATAGACAAAGCTATTTCTACCACCATGATGTTTACAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440615.6
CDS-3UTR CAA 90 bp ACAAGCTCAGATAGAAATCCCCACTATACGCACAAAGCTGGATTCAAATTATTCGAAGGGCCATTAGCTTaGATATCCACAAATTTTCCA +
Preference number: 5 (lower is better)
Translates to: TSSDRNPHYTHKAGFKLFEGPLA*ISTNFP
Trigger: TGGAAAATTTGTGGATATCAAAGCTAATGGCCCTTC...GAATAATTTGAATCCAGCTTTGTGCGTATAGTGGGGATTTCTATCTGAGCTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566442.5
CDS-3UTR CAA 90 bp GACAAAGTGAAGGAATTCTGCACACAGACCAAACTCCAGAATTGTATTTTTCTTCATACCAGACCTCATTaGATCCTGGAAGAAACACAT +
Preference number: 5 (lower is better)
Translates to: DKVKEFCTQTKLQNCIFLHTRPH*ILEETH
Trigger: ATGTGTTTCTTCCAGGATCAAATGAGGTCTGGTATG...AAGAAAAATACAATTCTGGAGTTTGGTCTGTGTGCAGAATTCCTTCACTTTGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR CAA 90 bp CAAAGGGCAGATAATGAACACATAAACAACTGCACATTTCAATTCCCAGAAGCCGTCAACTTTGATCACTaGCCTAAAGTGATGTTTACT +
Preference number: 5 (lower is better)
Translates to: QRADNEHINNCTFQFPEAVNFDH*PKVMFT
Trigger: AGTAAACATCACTTTAGGCAAGTGATCAAAGTTGAC...GGCTTCTGGGAATTGAAATGTGCAGTTGTTTATGTGTTCATTATCTGCCCTTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR CAA 90 bp AGGCTGTCTCCACTTGTCTCTAGCCAAATGTTTCAATATAGATTTGGGTCAAAATGGGGGCACATGATATaGATAGGTTTTATTACAGGT +
Preference number: 5 (lower is better)
Translates to: RLSPLVSSQMFQYRFGSKWGHMI*IGFITG
Trigger: ACCTGTAATAAAACCTATCAATATCATGTGCCCCCA...TTTTGACCCAAATCTATATTGAAACATTTGGCTAGAGACAAGTGGAGACAGCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR CAA 90 bp ATGGTGGTAGAAATAGCTTTGTCTATGTCTTCAAGCATAGTGTTGATCACAATTGATGTCCCAGGTAATTaGTCCTTGTTTATCAGGCTC +
Preference number: 5 (lower is better)
Translates to: MVVEIALSMSSSIVLITIDVPGN*SLFIRL
Trigger: GAGCCTGATAAACAAGGACAAATTACCTGGGACATC...AATTGTGATCAACACTATGCTTGAAGACATAGACAAAGCTATTTCTACCACCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440615.6
CDS-3UTR CAA 90 bp AAACATCATGGTGGTAGAAATAGCTTTGTCTATGTCTTCAAGCATAGTGTTGATTTGTCCCTTCTACAGTaGCAGCCAGTTGGTTTATTG +
Preference number: 5 (lower is better)
Translates to: KHHGGRNSFVYVFKHSVDLSLLQ*QPVGLL
Trigger: CAATAAACCAACTGGCTGCAACTGTAGAAGGGACAA...ATCAACACTATGCTTGAAGACATAGACAAAGCTATTTCTACCACCATGATGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440615.6
CDS TCA 90 bp GCCACTGTTTCTGACGCCTGTAAAATGCGATCTTGTTACAGTCTCTaGAAATGTTTTTATCTACAGCTTCATCTTCAAGACTTATTTCCT +
Preference number: 5 (lower is better)
Translates to: ATVSDACKMRSCYSL*KCFYLQLHLQDLFP
Trigger: AGGAAATAAGTCTTGAAGATGAAGCTGTAGATAAAAACATTTTCAGAGACTGTAACAAGATCGCATTTTACAGGCGTCAGAAACAGTGGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000318010.12
ENST00000440615.6
ENST00000562170.5
ENST00000562859.5
ENST00000566442.5
CDS-3UTR CAA 90 bp ATGGTGGTAGAAATAGCTTTGTCTATGTCTTCAAGCATAGTGTTGATCACAATTACCTTACTTGCTTCATaGATGATTTGGAACCTGGTG +
Preference number: 5 (lower is better)
Translates to: MVVEIALSMSSSIVLITITLLAS*MIWNLV
Trigger: CACCAGGTTCCAAATCATCAATGAAGCAAGTAAGGT...AATTGTGATCAACACTATGCTTGAAGACATAGACAAAGCTATTTCTACCACCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440615.6
CDS-3UTR CAA 90 bp TTCAACTCCCAGTGTTTATGTGCTTTGACTGTGTTTCTGCTGCTTATCATTTTGATAGAAATTTTCAAGTaGCTCCATTCTGCTGTGTTG +
Preference number: 5 (lower is better)
Translates to: FNSQCLCALTVFLLLIILIEIFK*LHSAVL
Trigger: CAACACAGCAGAATGGAGCAACTTGAAAATTTCTAT...CAAAATGATAAGCAGCAGAAACACAGTCAAAGCACATAAACACTGGGAGTTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS-3UTR CAA 90 bp GACAAAGTGAAGGAATTCTGCACACAGACCAAACTCCAGAATTGTATTTTTCTTCCTTTGGGAAGAATCTaGTACCAGAAAAGCAAATCA +
Preference number: 5 (lower is better)
Translates to: DKVKEFCTQTKLQNCIFLPLGRI*YQKSKS
Trigger: TGATTTGCTTTTCTGGTACAAGATTCTTCCCAAAGG...AAGAAAAATACAATTCTGGAGTTTGGTCTGTGTGCAGAATTCCTTCACTTTGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS GCA 72 bp TCTGGGAGCTCACCCGTCACCACTGTCGTTTTTCAGTaGGGGACCGGCAACCGTAGCTGCTGCCGACCGGTC +
Preference number: 6 (lower is better)
Translates to: SGSSPVTTVVFQ*GTGNRSCCRPV
Trigger: GACCGGTCGGCAGCAGCTACGGTTGCCGGTCCCGCACTGAAAAACGACAGTGGTGACGGGTGAGCTCCCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561871.1
CDS CAA 90 bp CACTCCACGGCTGTGAAGATGGCGGCGGCTGCGTGGCTTCAGGTGTaGCCTGTCATTCTTCTGCTTCTGGGAGCTCACCCGTCACCACTG +
Preference number: 6 (lower is better)
Translates to: HSTAVKMAAAAWLQV*PVILLLLGAHPSPL
Trigger: CAGTGGTGACGGGTGAGCTCCCAGAAGCAGAAGAATGACAGGCAACACCTGAAGCCACGCAGCCGCCGCCATCTTCACAGCCGTGGAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000561871.1
ENST00000562170.5
ENST00000562859.5
CDS TCA 72 bp GAGGGTGAAATGCTTTCGGTAGGCACTCCACGGCTGTaGAGATGGCGGCGGCTGCGTGGCTTCAGGTGTTGC +
Preference number: 6 (lower is better)
Translates to: EGEMLSVGTPRL*RWRRLRGFRCC
Trigger: GCAACACCTGAAGCCACGCAGCCGCCGCCATCTTCACAGCCGTGGAGTGCCTACCGAAAGCATTTCACCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000561871.1
ENST00000562170.5
ENST00000562859.5
CDS TCA 72 bp GTAGGTCCAAAGTCTCACGGCGCACAGACGACTGTCTaGGAGAGGGGCCGCTACGCCGCACAGCAAACAAGC +
Preference number: 6 (lower is better)
Translates to: VGPKSHGAQTTV*ERGRYAAQQTS
Trigger: GCTTGTTTGCTGTGCGGCGTAGCGGCCCCTCTCTCAGACAGTCGTCTGTGCGCCGTGAGACTTTGGACCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561871.1
ENST00000562859.5
CDS CAA 72 bp GCTGTGAAGATGGCGGCGGCTGCGTGGCTTCAGGTGTaGCCTGTCATTCTTCTGCTTCTGGGAGCTCACCCG +
Preference number: 6 (lower is better)
Translates to: AVKMAAAAWLQV*PVILLLLGAHP
Trigger: CGGGTGAGCTCCCAGAAGCAGAAGAATGACAGGCAACACCTGAAGCCACGCAGCCGCCGCCATCTTCACAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000561871.1
ENST00000562170.5
ENST00000562859.5
CDS TCA 72 bp CAGAGCCGGAAGAAGGCGGGACGAACCGGAAGAGGGTaGAATGCTTTCGGTAGGCACTCCACGGCTGTGAAG +
Preference number: 6 (lower is better)
Translates to: QSRKKAGRTGRG*NAFGRHSTAVK
Trigger: CTTCACAGCCGTGGAGTGCCTACCGAAAGCATTTCACCCTCTTCCGGTTCGTCCCGCCTTCTTCCGGCTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561871.1
ENST00000562859.5
CDS GCA 72 bp GTCGTTTTTCAGTGCGGGACCGGCAACCGTAGCTGCTaGCGACCGGTCCAAATGGCACATTCCGATACCGTC +
Preference number: 6 (lower is better)
Translates to: VVFQCGTGNRSC*RPVQMAHSDTV
Trigger: GACGGTATCGGAATGTGCCATTTGGACCGGTCGGCAGCAGCTACGGTTGCCGGTCCCGCACTGAAAAACGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561871.1
CDS CCA 72 bp AGGCACTCCACGGCTGTGAAGATGGCGGCGGCTGCGTaGCTTCAGGTGTTGCCTGTCATTCTTCTGCTTCTG +
Preference number: 6 (lower is better)
Translates to: RHSTAVKMAAAA*LQVLPVILLLL
Trigger: CAGAAGCAGAAGAATGACAGGCAACACCTGAAGCCACGCAGCCGCCGCCATCTTCACAGCCGTGGAGTGCCT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000561871.1
ENST00000562170.5
ENST00000562859.5
CDS CCA 72 bp TCGGTTAAGGGTGGGAAGTGCCGGCCGGGTCTTTGCTaGAGGCTAGGTCTCCAGCCAGATTGTACTGCAGCA +
Preference number: 6 (lower is better)
Translates to: SVKGGKCRPGLC*RLGLQPDCTAA
Trigger: TGCTGCAGTACAATCTGGCTGGAGACCTAGCCTCCAGCAAAGACCCGGCCGGCACTTCCCACCCTTAACCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566442.5
CDS GCA 72 bp GTACGCAATGAGTCCAGGTTCCAACAGGATGACGCCTaGGCAGTAGGTCCAAAGTCTCACGGCGCACAGACG +
Preference number: 6 (lower is better)
Translates to: VRNESRFQQDDA*AVGPKSHGAQT
Trigger: CGTCTGTGCGCCGTGAGACTTTGGACCTACTGCGCAGGCGTCATCCTGTTGGAACCTGGACTCATTGCGTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562859.5
CDS GCA 72 bp ACTGTCGTTTTTCAGTGCGGGACCGGCAACCGTAGCTaGTGCCGACCGGTCCAAATGGCACATTCCGATACC +
Preference number: 6 (lower is better)
Translates to: TVVFQCGTGNRS*CRPVQMAHSDT
Trigger: GGTATCGGAATGTGCCATTTGGACCGGTCGGCAGCAGCTACGGTTGCCGGTCCCGCACTGAAAAACGACAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561871.1
CDS CCA 72 bp GGACCGGCAACCGTAGCTGCTGCCGACCGGTCCAAATaGCACATTCCGATACCGTCGGTGAGTATTCACTTC +
Preference number: 6 (lower is better)
Translates to: GPATVAAADRSK*HIPIPSVSIHF
Trigger: GAAGTGAATACTCACCGACGGTATCGGAATGTGCCATTTGGACCGGTCGGCAGCAGCTACGGTTGCCGGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561871.1
CDS TCA 72 bp AACGTGCTTTTGTTAGGAACCGAAACTGGGCGGCGGTaGGGGCGTGTACGCAATGAGTCCCTCTCTGTCTCC +
Preference number: 6 (lower is better)
Translates to: NVLLLGTETGRR*GRVRNESLSVS
Trigger: GGAGACAGAGAGGGACTCATTGCGTACACGCCCTCACCGCCGCCCAGTTTCGGTTCCTAACAAAAGCACGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566442.5
CDS GCA 72 bp CGGCTGCGTGGCTTCAGGTGTTGCCTGTCATTCTTCTaGTTCTGGGAGCTCACCCGTCACCACTGTCGTTTT +
Preference number: 6 (lower is better)
Translates to: RLRGFRCCLSFF*FWELTRHHCRF
Trigger: AAAACGACAGTGGTGACGGGTGAGCTCCCAGAAGCAGAAGAATGACAGGCAACACCTGAAGCCACGCAGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000561871.1
ENST00000562170.5
ENST00000562859.5
CDS GCA 72 bp AGCGGAAGTAGAGAGCCAAATCCTGCACGGGGTGCCTaGCTGGTCCTAAAACCTTTAACGGCTGGGAGACAG +
Preference number: 6 (lower is better)
Translates to: SGSREPNPARGA*LVLKPLTAGRQ
Trigger: CTGTCTCCCAGCCGTTAAAGGTTTTAGGACCAGGCAGGCACCCCGTGCAGGATTTGGCTCTCTACTTCCGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561871.1
ENST00000566442.5
CDS GCA 72 bp TTTTCGGTTAAGGGTGGGAAGTGCCGGCCGGGTCTTTaGTGGAGGCTAGGTCTCCAGCCAGATTGTACTGCA +
Preference number: 6 (lower is better)
Translates to: FSVKGGKCRPGL*WRLGLQPDCTA
Trigger: TGCAGTACAATCTGGCTGGAGACCTAGCCTCCAGCAAAGACCCGGCCGGCACTTCCCACCCTTAACCGAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566442.5
CDS TCA 72 bp AACGTGCTTTTGTTAGGAACCGAAACTGGGCGGCGGTaGGGGCGTGTACGCAATGAGTCCAGGTTCCAACAG +
Preference number: 6 (lower is better)
Translates to: NVLLLGTETGRR*GRVRNESRFQQ
Trigger: CTGTTGGAACCTGGACTCATTGCGTACACGCCCTCACCGCCGCCCAGTTTCGGTTCCTAACAAAAGCACGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562859.5
CDS TCA 72 bp AACGTGCTTTTGTTAGGAACCGAAACTGGGCGGCGGTaGGGGCGTGTACGCAATGAGTCTACTAGACGCCAC +
Preference number: 6 (lower is better)
Translates to: NVLLLGTETGRR*GRVRNESTRRH
Trigger: GTGGCGTCTAGTAGACTCATTGCGTACACGCCCTCACCGCCGCCCAGTTTCGGTTCCTAACAAAAGCACGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561871.1
CDS GCA 72 bp TCTTTGCTGGAGGCTAGGTCTCCAGCCAGATTGTACTaGAGCATCGTACTCTTCAGGGCTAGAAGGGGCCTT +
Preference number: 6 (lower is better)
Translates to: SLLEARSPARLY*SIVLFRARRGL
Trigger: AAGGCCCCTTCTAGCCCTGAAGAGTACGATGCTGCAGTACAATCTGGCTGGAGACCTAGCCTCCAGCAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566442.5
CDS CCA 72 bp CGTGGCTTCAGGTGTTGCCTGTCATTCTTCTGCTTCTaGGAGCTCACCCGTCACCACTGTCGTTTTTCAGTG +
Preference number: 6 (lower is better)
Translates to: RGFRCCLSFFCF*ELTRHHCRFSV
Trigger: CACTGAAAAACGACAGTGGTGACGGGTGAGCTCCCAGAAGCAGAAGAATGACAGGCAACACCTGAAGCCACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000561871.1
ENST00000562170.5
ENST00000562859.5
CDS TCA 72 bp ACCAACGCACTAGCAGCTCTGTCTCTGGATTCCCAATaGACCCGCCTATGTCAGCTCCGCAAAAAGAGATCC +
Preference number: 6 (lower is better)
Translates to: TNALAALSLDSQ*TRLCQLRKKRS
Trigger: GGATCTCTTTTTGCGGAGCTGACATAGGCGGGTTCATTGGGAATCCAGAGACAGAGCTGCTAGTGCGTTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS GCA 72 bp CCACAGAGGCCTCATGACAGGTTGGGAAGCCACGTGTaGATGGTAGAACAGAGAATACCAATATGGCAGGAG +
Preference number: 6 (lower is better)
Translates to: PQRPHDRLGSHV*MVEQRIPIWQE
Trigger: CTCCTGCCATATTGGTATTCTCTGTTCTACCATGCACACGTGGCTTCCCAACCTGTCATGAGGCCTCTGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS CCA 72 bp AGCCACGTGTGCATGGTAGAACAGAGAATACCAATATaGCAGGAGGCCATAGCGCTCTCTGATGGCTTCTCG +
Preference number: 6 (lower is better)
Translates to: SHVCMVEQRIPI*QEAIALSDGFS
Trigger: CGAGAAGCCATCAGAGAGCGCTATGGCCTCCTGCCATATTGGTATTCTCTGTTCTACCATGCACACGTGGCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS CCA 72 bp ACTGATTTTCTACAAAGAATACTGGCAACCTCACGCTaGGCACTGGCCTGTTCCCCAAGGACAACTGGCCTG +
Preference number: 6 (lower is better)
Translates to: TDFLQRILATSR*ALACSPRTTGL
Trigger: CAGGCCAGTTGTCCTTGGGGAACAGGCCAGTGCCCAGCGTGAGGTTGCCAGTATTCTTTGTAGAAAATCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440615.6
CDS CAA 90 bp GTCCCAGGTAATTTGTCCTTGTTTATCAGGCTCCTCAGCTTCCTTTaGAGCCAGGTGCTGTCTTGTGCTGAGATCCTGTGTCTCCTCCTG +
Preference number: 6 (lower is better)
Translates to: VPGNLSLFIRLLSFL*SQVLSCAEILCLLL
Trigger: CAGGAGGAGACACAGGATCTCAGCACAAGACAGCACCTGGCTCAAAAGGAAGCTGAGGAGCCTGATAAACAAGGACAAATTACCTGGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440615.6
ENST00000568687.5
CDS TCA 72 bp TCTGGGTCAGTGTGTACTCTACTGCAGGCTCTGTATTaGTCTCCACCAGTGTTTCCGAGGCATTCAGCCAGA +
Preference number: 6 (lower is better)
Translates to: SGSVCTLLQALY*SPPVFPRHSAR
Trigger: TCTGGCTGAATGCCTCGGAAACACTGGTGGAGATCAATACAGAGCCTGCAGTAGAGTACACACTGACCCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318010.12
ENST00000566442.5
ENST00000567421.1
CDS CAA 72 bp ATCTGGGTCAGTGTGTACTCTACTGCAGGCTCTGTATaGATCTCCACCAGTGTTTCCGAGGCATTCAGCCAG +
Preference number: 6 (lower is better)
Translates to: IWVSVYSTAGSV*ISTSVSEAFSQ
Trigger: CTGGCTGAATGCCTCGGAAACACTGGTGGAGATCAATACAGAGCCTGCAGTAGAGTACACACTGACCCAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318010.12
ENST00000566442.5
ENST00000567421.1
CDS CAA 90 bp GCAGTTCTTTGTCATATGATGCGGACCTCCCAGTCAGTGGCAATGTaGAGTGAGAGCTTCTCCAGGCTCAGGATGGATGTTTTGGCACAA +
Preference number: 6 (lower is better)
Translates to: AVLCHMMRTSQSVAM*SESFSRLRMDVLAQ
Trigger: TTGTGCCAAAACATCCATCCTGAGCCTGGAGAAGCTCTCACTCAACATTGCCACTGACTGGGAGGTCCGCATCATATGACAAAGAACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS CAA 90 bp CTCAGTCTTGGGAGCTACGTTGCTGATGTCCCAGGTAATTTGTCCTaGTTTATCAGGCTCCTCAGCTTCCTTTTGAGCCAGGTGCTGTCT +
Preference number: 6 (lower is better)
Translates to: LSLGSYVADVPGNLS*FIRLLSFLLSQVLS
Trigger: AGACAGCACCTGGCTCAAAAGGAAGCTGAGGAGCCTGATAAACAAGGACAAATTACCTGGGACATCAGCAACGTAGCTCCCAAGACTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440615.6
ENST00000568687.5
CDS TCA 72 bp CATCCTCGGAGAAGCTGCTGGAAGTGTTGTCTCTGGTaGAACCTTGCAAACAGGCTGAGCATGGAGTTTGTT +
Preference number: 6 (lower is better)
Translates to: HPRRSCWKCCLW*NLANRLSMEFV
Trigger: AACAAACTCCATGCTCAGCCTGTTTGCAAGGTTTCACCAGAGACAACACTTCCAGCAGCTTCTCCGAGGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440615.6
CDS CCA 72 bp GATCTGACCTTTTGTTTAGCAGCAACTGGGCCCATCTaGGTCAGTGTGTACTCTACTGCAGGCTCTGTATTG +
Preference number: 6 (lower is better)
Translates to: DLTFCLAATGPI*VSVYSTAGSVL
Trigger: CAATACAGAGCCTGCAGTAGAGTACACACTGACCCAGATGGGCCCAGTTGCTGCTAAACAAAAGGTCAGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318010.12
ENST00000566442.5
ENST00000567421.1
CDS CCA 72 bp ACCTCGCTGAAACACTGGAATAGTGTCCAAGGCTACTaGGATCTTTACAGTACACCCTCCTTCCCAATGAGC +
Preference number: 6 (lower is better)
Translates to: TSLKHWNSVQGY*DLYSTPSFPMS
Trigger: GCTCATTGGGAAGGAGGGTGTACTGTAAAGATCCCAGTAGCCTTGGACACTATTCCAGTGTTTCAGCGAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318010.12
ENST00000566690.1
ENST00000567596.5
CDS CAA 72 bp TCCCCAGAGCATGAAATCAGCCTTACAGTGCTTGGCTaGCTTGTGAGGACATCCGGAACTTCAAATCTGGGT +
Preference number: 6 (lower is better)
Translates to: SPEHEISLTVLG*LVRTSGTSNLG
Trigger: ACCCAGATTTGAAGTTCCGGATGTCCTCACAAGCAAGCCAAGCACTGTAAGGCTGATTTCATGCTCTGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318010.12
ENST00000562859.5
ENST00000566442.5
ENST00000567421.1
CDS CAA 72 bp GGGAGCTACGTTGCTGATGTCCCAGGTAATTTGTCCTaGTTTATCAGGCTCCTCAGCTTCCTTTTGAGCCAG +
Preference number: 6 (lower is better)
Translates to: GSYVADVPGNLS*FIRLLSFLLSQ
Trigger: CTGGCTCAAAAGGAAGCTGAGGAGCCTGATAAACAAGGACAAATTACCTGGGACATCAGCAACGTAGCTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440615.6
ENST00000568687.5
CDS CAA 90 bp GTTTGTTCCAAGAGGTCCTCAAAGTTCTCAGTCTTGGGAGCTACGTaGCTGATGTCCCAGGTAATTTGTCCTTGTTTATCAGGCTCCTCA +
Preference number: 6 (lower is better)
Translates to: VCSKRSSKFSVLGAT*LMSQVICPCLSGSS
Trigger: TGAGGAGCCTGATAAACAAGGACAAATTACCTGGGACATCAGCAACGTAGCTCCCAAGACTGAGAACTTTGAGGACCTCTTGGAACAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440615.6
CDS GCA 72 bp AACCGTAGATGTTGTGGAGCTCTCTGTGCTCCCAATTaGCATGATGAATGGCATTCTTCTGCATGGTTTGCT +
Preference number: 6 (lower is better)
Translates to: NRRCCGALCAPN*HDEWHSSAWFA
Trigger: AGCAAACCATGCAGAAGAATGCCATTCATCATGGCAATTGGGAGCACAGAGAGCTCCACAACATCTACGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318010.12
ENST00000568953.1
CDS CAA 72 bp AATTTGTCCTTGTTTATCAGGCTCCTCAGCTTCCTTTaGAGCCAGGTGCTGTCTTGTGCTGAGATCCTGTGT +
Preference number: 6 (lower is better)
Translates to: NLSLFIRLLSFL*SQVLSCAEILC
Trigger: ACACAGGATCTCAGCACAAGACAGCACCTGGCTCAAAAGGAAGCTGAGGAGCCTGATAAACAAGGACAAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440615.6
ENST00000568687.5
CDS CAA 72 bp AGTCTTGGGAGCTACGTTGCTGATGTCCCAGGTAATTaGTCCTTGTTTATCAGGCTCCTCAGCTTCCTTTTG +
Preference number: 6 (lower is better)
Translates to: SLGSYVADVPGN*SLFIRLLSFLL
Trigger: CAAAAGGAAGCTGAGGAGCCTGATAAACAAGGACAAATTACCTGGGACATCAGCAACGTAGCTCCCAAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440615.6
ENST00000568687.5
CDS CAA 90 bp GTCCATAGGAGGATTCAGTCATCCAGCCTGTGGATTTTCCTACAGTaGTCTTTATTGGTATCACACTTCCACCTCGCTGAAACACTGGAA +
Preference number: 6 (lower is better)
Translates to: VHRRIQSSSLWIFLQ*SLLVSHFHLAETLE
Trigger: TTCCAGTGTTTCAGCGAGGTGGAAGTGTGATACCAATAAAGACAACTGTAGGAAAATCCACAGGCTGGATGACTGAATCCTCCTATGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318010.12
ENST00000566690.1
ENST00000567596.5
CDS TCA 72 bp AGCATGAAATCAGCCTTACAGTGCTTGGCTTGCTTGTaGGGACATCCGGAACTTCAAATCTGGGTTTTAGAG +
Preference number: 6 (lower is better)
Translates to: SMKSALQCLACL*GHPELQIWVLE
Trigger: CTCTAAAACCCAGATTTGAAGTTCCGGATGTCCTCACAAGCAAGCCAAGCACTGTAAGGCTGATTTCATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318010.12
ENST00000562859.5
ENST00000566442.5
ENST00000567421.1
CDS TCA 72 bp GCCCAGATCTTCTTGATTTTCCTGAGAGGTGTCCACTaGTGTCTCCTCCTCATTTTCTTTAGCAGCTCTTTG +
Preference number: 6 (lower is better)
Translates to: AQIFLIFLRGVH*CLLLIFFSSSL
Trigger: CAAAGAGCTGCTAAAGAAAATGAGGAGGAGACATCAGTGGACACCTCTCAGGAAAATCAAGAAGATCTGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318010.12
ENST00000566442.5
ENST00000567421.1
CDS TCA 72 bp GAAGAAACACATCAACTGTGGTGGCTTTTGGTTCTGTaGCTGGATGAACCAATAATGCACTCCCCAGCATGT +
Preference number: 6 (lower is better)
Translates to: EETHQLWWLLVL*LDEPIMHSPAC
Trigger: ACATGCTGGGGAGTGCATTATTGGTTCATCCAGTCACAGAACCAAAAGCCACCACAGTTGATGTGTTTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS GCA 72 bp CTCTTCTTCAGACACCAAGTCTACCTTGAATGGGTTTaGTGTGATATGGCACTTCAGGTCTCCTTTTCCATC +
Preference number: 6 (lower is better)
Translates to: LFFRHQVYLEWV*CDMALQVSFSI
Trigger: GATGGAAAAGGAGACCTGAAGTGCCATATCACAGCAAACCCATTCAAGGTAGACTTGGTGTCTGAAGAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318010.12
ENST00000566442.5
ENST00000567421.1
CDS CCA 72 bp GACACCAAGTCTACCTTGAATGGGTTTGCTGTGATATaGCACTTCAGGTCTCCTTTTCCATCTGCCAATATC +
Preference number: 6 (lower is better)
Translates to: DTKSTLNGFAVI*HFRSPFPSANI
Trigger: GATATTGGCAGATGGAAAAGGAGACCTGAAGTGCCATATCACAGCAAACCCATTCAAGGTAGACTTGGTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318010.12
ENST00000566442.5
ENST00000567421.1
CDS CCA 72 bp CACAACCTCTTCTTCAGACACCAAGTCTACCTTGAATaGGTTTGCTGTGATATGGCACTTCAGGTCTCCTTT +
Preference number: 6 (lower is better)
Translates to: HNLFFRHQVYLE*VCCDMALQVSF
Trigger: AAAGGAGACCTGAAGTGCCATATCACAGCAAACCCATTCAAGGTAGACTTGGTGTCTGAAGAAGAGGTTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318010.12
ENST00000566442.5
ENST00000567421.1
CDS CCA 72 bp ACCAGCTGTGATCAAGACCTCCCGGGATCCAGAGGATaGTCTAATAGTTCATTAAATTGCTGTAGGACACTA +
Preference number: 6 (lower is better)
Translates to: TSCDQDLPGSRG*SNSSLNCCRTL
Trigger: TAGTGTCCTACAGCAATTTAATGAACTATTAGACCATCCTCTGGATCCCGGGAGGTCTTGATCACAGCTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440615.6
CDS CAA 72 bp CCAATTGCCATGATGAATGGCATTCTTCTGCATGGTTaGCTCTGGCCCTCTAAAGACAGAAGGCTCATTCAT +
Preference number: 6 (lower is better)
Translates to: PIAMMNGILLHG*LWPSKDRRLIH
Trigger: ATGAATGAGCCTTCTGTCTTTAGAGGGCCAGAGCAAACCATGCAGAAGAATGCCATTCATCATGGCAATTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318010.12
ENST00000568953.1
CDS TCA 72 bp CACAAAGAAGCCCTGATCTTTGGCCTTCACATATACTaGGTAGTCAGGATCAATCTTGATGTGGGGATCACT +
Preference number: 6 (lower is better)
Translates to: HKEALIFGLHIY*VVRINLDVGIT
Trigger: AGTGATCCCCACATCAAGATTGATCCTGACTACTCAGTATATGTGAAGGCCAAAGATCAGGGCTTCTTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318010.12
ENST00000567421.1
ENST00000568953.1
CDS GCA 72 bp ATAAGGAATGTCATGCTCATCAAACCCTGCATCCACTaGTTTTACATCCTGCTCATCTTCATAGTTCCAGCG +
Preference number: 6 (lower is better)
Translates to: IRNVMLIKPCIH*FYILLIFIVPA
Trigger: CGCTGGAACTATGAAGATGAGCAGGATGTAAAAGCAGTGGATGCAGGGTTTGATGAGCATGACATTCCTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318010.12
ENST00000567421.1
CDS CCA 72 bp CATCCAGCCTGTGGATTTTCCTACAGTTGTCTTTATTaGTATCACACTTCCACCTCGCTGAAACACTGGAAT +
Preference number: 6 (lower is better)
Translates to: HPACGFSYSCLY*YHTSTSLKHWN
Trigger: ATTCCAGTGTTTCAGCGAGGTGGAAGTGTGATACCAATAAAGACAACTGTAGGAAAATCCACAGGCTGGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318010.12
ENST00000566690.1
ENST00000567596.5
CDS CAA 72 bp CTAATCACAACCTCTTCTTCAGACACCAAGTCTACCTaGAATGGGTTTGCTGTGATATGGCACTTCAGGTCT +
Preference number: 6 (lower is better)
Translates to: LITTSSSDTKST*NGFAVIWHFRS
Trigger: AGACCTGAAGTGCCATATCACAGCAAACCCATTCAAGGTAGACTTGGTGTCTGAAGAAGAGGTTGTGATTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318010.12
ENST00000566442.5
ENST00000567421.1
CDS CAA 72 bp TCATCCAGCCTGTGGATTTTCCTACAGTTGTCTTTATaGGTATCACACTTCCACCTCGCTGAAACACTGGAA +
Preference number: 6 (lower is better)
Translates to: SSSLWIFLQLSL*VSHFHLAETLE
Trigger: TTCCAGTGTTTCAGCGAGGTGGAAGTGTGATACCAATAAAGACAACTGTAGGAAAATCCACAGGCTGGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318010.12
ENST00000566690.1
ENST00000567596.5
CDS CAA 72 bp AAGAGGTCCTCAAAGTTCTCAGTCTTGGGAGCTACGTaGCTGATGTCCCAGGTAATTTGTCCTTGTTTATCA +
Preference number: 6 (lower is better)
Translates to: KRSSKFSVLGAT*LMSQVICPCLS
Trigger: TGATAAACAAGGACAAATTACCTGGGACATCAGCAACGTAGCTCCCAAGACTGAGAACTTTGAGGACCTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440615.6
CDS GCA 72 bp CATGGCATCATAAGGAATGTCATGCTCATCAAACCCTaGATCCACTGCTTTTACATCCTGCTCATCTTCATA +
Preference number: 6 (lower is better)
Translates to: HGIIRNVMLIKP*IHCFYILLIFI
Trigger: TATGAAGATGAGCAGGATGTAAAAGCAGTGGATGCAGGGTTTGATGAGCATGACATTCCTTATGATGCCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318010.12
ENST00000567421.1
CDS GCA 72 bp CCGGGATCCAGAGGATGGTCTAATAGTTCATTAAATTaGTGTAGGACACTAATTGTCCCTTCTACAGTTGCA +
Preference number: 6 (lower is better)
Translates to: PGSRGWSNSSLN*CRTLIVPSTVA
Trigger: TGCAACTGTAGAAGGGACAATTAGTGTCCTACAGCAATTTAATGAACTATTAGACCATCCTCTGGATCCCGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440615.6
CDS GCA 72 bp AGGGAGCCAGTTCCTCTTAATGGGAACCCACCACTTTaGTGGAATCAACTTGAGAAATTCTCAGCAAAAATA +
Preference number: 6 (lower is better)
Translates to: REPVPLNGNPPL*WNQLEKFSAKI
Trigger: TATTTTTGCTGAGAATTTCTCAAGTTGATTCCAGCAAAGTGGTGGGTTCCCATTAAGAGGAACTGGCTCCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566690.1
CDS CAA 72 bp TATTTTTCTCCAATGTCTGTAAGGTGTGAGTACTGTTaGAAGACATCAGAAGGTGTAGGTCCTGTCAGCAGA +
Preference number: 6 (lower is better)
Translates to: YFSPMSVRCEYC*KTSEGVGPVSR
Trigger: TCTGCTGACAGGACCTACACCTTCTGATGTCTTCAAACAGTACTCACACCTTACAGACATTGGAGAAAAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566442.5
CDS CCA 72 bp TGCAAAAATTGCTTCTGGTGGAGGTATTGGAATGAATaGCCATCATCAAGATATAACTCACCCACTGAAGAA +
Preference number: 6 (lower is better)
Translates to: CKNCFWWRYWNE*PSSRYNSPTEE
Trigger: TTCTTCAGTGGGTGAGTTATATCTTGATGATGGCCATTCATTCCAATACCTCCACCAGAAGCAATTTTTGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318010.12
ENST00000566690.1
ENST00000567596.5
CDS GCA 72 bp TCTCTCCTTCCCTTTAGATCGTTTTATCAGTCCTTCTaGAGTAGCCATTTGATGATAAAAACCGTAGATGTT +
Preference number: 6 (lower is better)
Translates to: SLLPFRSFYQSF*SSHLMIKTVDV
Trigger: AACATCTACGGTTTTTATCATCAAATGGCTACTGCAGAAGGACTGATAAAACGATCTAAAGGGAAGGAGAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318010.12
CDS CCA 72 bp AGGACACTAATTGTCCCTTCTACAGTTGCAGCCAGTTaGTTTATTGCAAGCACTGATTTTCTACAAAGAATA +
Preference number: 6 (lower is better)
Translates to: RTLIVPSTVAAS*FIASTDFLQRI
Trigger: TATTCTTTGTAGAAAATCAGTGCTTGCAATAAACCAACTGGCTGCAACTGTAGAAGGGACAATTAGTGTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440615.6
CDS TCA 72 bp TCTGACGCCTGTAAAATGCGATCTTGTTACAGTCTCTaGAAATGTTTTTATCTACAGCTTCATCTTCAAGAC +
Preference number: 6 (lower is better)
Translates to: SDACKMRSCYSL*KCFYLQLHLQD
Trigger: GTCTTGAAGATGAAGCTGTAGATAAAAACATTTTCAGAGACTGTAACAAGATCGCATTTTACAGGCGTCAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000318010.12
ENST00000440615.6
ENST00000562170.5
ENST00000562859.5
ENST00000566442.5
ENST00000567421.1
ENST00000568687.5
CDS TCA 72 bp CTGGAATTTTTCAGGCCCAAACTAGCGTTTCTACAATaGTTTATTTGGCAAATTTGTCTTGATTATGGGTGG +
Preference number: 6 (lower is better)
Translates to: LEFFRPKLAFLQ*FIWQICLDYGW
Trigger: CCACCCATAATCAAGACAAATTTGCCAAATAAATCATTGTAGAAACGCTAGTTTGGGCCTGAAAAATTCCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000561871.1
ENST00000562170.5
ENST00000562859.5
ENST00000566442.5