RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GANAB (Homo sapiens)

Ensembl gene IDs: ENSG00000089597

Ensembl transcript IDs: ENST00000346178.8, ENST00000356638.8, ENST00000524437.5, ENST00000525994.1, ENST00000526210.1, ENST00000526732.5, ENST00000528503.1, ENST00000529737.5, ENST00000531563.1, ENST00000532402.5, ENST00000534419.1, ENST00000534422.5, ENST00000534613.5, ENST00000534779.5, ENST00000540933.5, ENST00000648273.1

Found 633 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGGAGCCAGCGAAGAAGGCCCTGGCCAGGACAAAGGGGCGTTCCATaGCCCCAGAGCGCTGTCTCAGCCCATCAGCAGTCGCCATGTGCA +
Preference number: 1 (lower is better)
Translates to: GSQRRRPWPGQRGVP*PQSAVSAHQQSPCA
Trigger: TGCACATGGCGACTGCTGATGGGCTGAGACAGCGCTCTGGGGGCATGGAACGCCCCTTTGTCCTGGCCAGGGCCTTCTTCGCTGGCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532402.5
3UTR CCA 90 bp CTGTCCACACGGCTCCAAAGCGCTGGGAGCCAGCGAAGAAGGCCCTaGCCAGGACAAAGGGGCGTTCCATGCCCCCAGAGCGCTGTCTCA +
Preference number: 1 (lower is better)
Translates to: LSTRLQSAGSQRRRP*PGQRGVPCPQSAVS
Trigger: TGAGACAGCGCTCTGGGGGCATGGAACGCCCCTTTGTCCTGGCCAGGGCCTTCTTCGCTGGCTCCCAGCGCTTTGGAGCCGTGTGGACAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532402.5
3UTR TCA 90 bp ACCCAGGTCTCTGCAGCATTGAGCCAGAAGATGCCCAAGTCGCGATaGGGGTTGTGTGCCAGGAGCACAGGCACAGACCCATACAAGGCC +
Preference number: 1 (lower is better)
Translates to: TQVSAALSQKMPKSR*GLCARSTGTDPYKA
Trigger: GGCCTTGTATGGGTCTGTGCCTGTGCTCCTGGCACACAACCCTCATCGCGACTTGGGCATCTTCTGGCTCAATGCTGCAGAGACCTGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532402.5
3UTR TCA 90 bp CCCTGCAGTCCCAACCCCTGTACTCACGAGACCCTAGGGGCCCTCTaGTGCTCAAACTCCAAGAGTCCTCGGGCATTGACACTAAGCAAA +
Preference number: 1 (lower is better)
Translates to: PCSPNPCTHETLGAL*CSNSKSPRALTLSK
Trigger: TTTGCTTAGTGTCAATGCCCGAGGACTCTTGGAGTTTGAGCATCAGAGGGCCCCTAGGGTCTCGTGAGTACAGGGGTTGGGACTGCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526210.1
3UTR TCA 90 bp CCCTTGGCCAGGCAGATAGACCTGGACACCATGGGCTCCAGAGTCTaGTACAGGGTGAACCAGCAACGCATCCCCAAGCAAGTACTGATC +
Preference number: 1 (lower is better)
Translates to: PLARQIDLDTMGSRV*YRVNQQRIPKQVLI
Trigger: GATCAGTACTTGCTTGGGGATGCGTTGCTGGTTCACCCTGTATCAGACTCTGGAGCCCATGGTGTCCAGGTCTATCTGCCTGGCCAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532402.5
3UTR CCA 90 bp CTGGTAAGCACCCATCTGGTACCAGCGCACAAGCAGCTCTGGCTCTaGGTTTTTGAAGAAGCCACCCACATCCGCCCCACAGAAGGAAAG +
Preference number: 1 (lower is better)
Translates to: LVSTHLVPAHKQLWL*VFEEATHIRPTEGK
Trigger: CTTTCCTTCTGTGGGGCGGATGTGGGTGGCTTCTTCAAAAACCCAGAGCCAGAGCTGCTTGTGCGCTGGTACCAGATGGGTGCTTACCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532402.5
3UTR CCA 90 bp GAATGGCTGGTAAGCACCCATCTGGTACCAGCGCACAAGCAGCTCTaGCTCTGGGTTTTTGAAGAAGCCACCCACATCCGCCCCACAGAA +
Preference number: 1 (lower is better)
Translates to: EWLVSTHLVPAHKQL*LWVFEEATHIRPTE
Trigger: TTCTGTGGGGCGGATGTGGGTGGCTTCTTCAAAAACCCAGAGCCAGAGCTGCTTGTGCGCTGGTACCAGATGGGTGCTTACCAGCCATTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532402.5
3UTR CCA 90 bp ATGCCAGGCTTGCGCAGGACCAACACAGAGGTCTCAGGGTCATGCTaGAAGGACAGGCGGCTTTCTGGAGATCCTTTTGTCTGGAGTACC +
Preference number: 1 (lower is better)
Translates to: MPGLRRTNTEVSGSC*KDRRLSGDPFVWST
Trigger: GGTACTCCAGACAAAAGGATCTCCAGAAAGCCGCCTGTCCTTCCAGCATGACCCTGAGACCTCTGTGTTGGTCCTGCGCAAGCCTGGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532402.5
3UTR TCA 90 bp TGCACCCACAGGGGCCTCATGACAGGAATGCCTTCCCGATGGGCCTaGTATAAGAGGGTGTACCAGAAGGGCAGCAAAGAATATCGCTGG +
Preference number: 1 (lower is better)
Translates to: CTHRGLMTGMPSRWA*YKRVYQKGSKEYRW
Trigger: CCAGCGATATTCTTTGCTGCCCTTCTGGTACACCCTCTTATATCAGGCCCATCGGGAAGGCATTCCTGTCATGAGGCCCCTGTGGGTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532402.5
3UTR GCA 90 bp TTGATGCCAGGCTTGCGCAGGACCAACACAGAGGTCTCAGGGTCATaGTGGAAGGACAGGCGGCTTTCTGGAGATCCTTTTGTCTGGAGT +
Preference number: 1 (lower is better)
Translates to: LMPGLRRTNTEVSGS*WKDRRLSGDPFVWS
Trigger: ACTCCAGACAAAAGGATCTCCAGAAAGCCGCCTGTCCTTCCAGCATGACCCTGAGACCTCTGTGTTGGTCCTGCGCAAGCCTGGCATCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532402.5
3UTR CCA 90 bp AGAGACAGAAAGCCGGGCTATTGGTGGATCAGCCACCAAAACATCTaGTACACGGTATCGGGGTCGCCGAGGCTCCAGCTCATCAATCCT +
Preference number: 1 (lower is better)
Translates to: RDRKPGYWWISHQNI*YTVSGSPRLQLINP
Trigger: AGGATTGATGAGCTGGAGCCTCGGCGACCCCGATACCGTGTACCAGATGTTTTGGTGGCTGATCCACCAATAGCCCGGCTTTCTGTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526210.1
ENST00000529737.5
ENST00000532402.5
ENST00000534613.5
3UTR TCA 90 bp AACCCACAGACATGGGGCCATACGGCTTGCTGTCAGAGTGAGTTTTaGATGTCTCCTCCCAGGCTCCTGGCTCATCTTTCTCTGCCTTCC +
Preference number: 1 (lower is better)
Translates to: NPQTWGHTACCQSEF*MSPPRLLAHLSLPS
Trigger: GGAAGGCAGAGAAAGATGAGCCAGGAGCCTGGGAGGAGACATTCAAAACTCACTCTGACAGCAAGCCGTATGGCCCCATGTCTGTGGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532402.5
ENST00000534613.5
3UTR GCA 90 bp CAGGGTCTTCCCGGCAGTGTTGGAAGATATATCAACCCAGGTCTCTaGAGCATTGAGCCAGAAGATGCCCAAGTCGCGATGAGGGTTGTG +
Preference number: 1 (lower is better)
Translates to: QGLPGSVGRYINPGL*SIEPEDAQVAMRVV
Trigger: CACAACCCTCATCGCGACTTGGGCATCTTCTGGCTCAATGCTGCAGAGACCTGGGTTGATATATCTTCCAACACTGCCGGGAAGACCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532402.5
3UTR TCA 90 bp GCTAAGTGCAACAAAGAGAGTGATGGGGTCATCCTTCATACATTCTaGAGACCGCCGCACTCGCATCCATCGAGGCACGATTGTCCCTCC +
Preference number: 1 (lower is better)
Translates to: AKCNKESDGVILHTF*RPPHSHPSRHDCPS
Trigger: GGAGGGACAATCGTGCCTCGATGGATGCGAGTGCGGCGGTCTTCAGAATGTATGAAGGATGACCCCATCACTCTCTTTGTTGCACTTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532402.5
3UTR TCA 90 bp TTCGGTCCTCTAGTAGGTCAAGGCGGAATGGCCGTGCTGTCAAGATaGTCTTGTAGGGTCCCTCAGCCATGGTTAACTCCACACTGTTCT +
Preference number: 1 (lower is better)
Translates to: FGPLVGQGGMAVLSR*SCRVPQPWLTPHCS
Trigger: AGAACAGTGTGGAGTTAACCATGGCTGAGGGACCCTACAAGATCATCTTGACAGCACGGCCATTCCGCCTTGACCTACTAGAGGACCGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000526210.1
ENST00000529737.5
ENST00000532402.5
ENST00000534613.5
3UTR TCA 90 bp ATCCCTTGGGTTATCGCAGGTGAATACTCCAATCAGATGCCACATTaGTGCCAGGCTTGCGCAGGACCAACACAGAGGTCTCAGGGTCAT +
Preference number: 1 (lower is better)
Translates to: IPWVIAGEYSNQMPH*CQACAGPTQRSQGH
Trigger: ATGACCCTGAGACCTCTGTGTTGGTCCTGCGCAAGCCTGGCATCAATGTGGCATCTGATTGGAGTATTCACCTGCGATAACCCAAGGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532402.5
3UTR CCA 90 bp AGGGTTGTGTGCCAGGAGCACAGGCACAGACCCATACAAGGCCATTaGGTTGTACAGCTCATACTGGAACACATCCAAATTGTAGAGGCG +
Preference number: 1 (lower is better)
Translates to: RVVCQEHRHRPIQGH*VVQLILEHIQIVEA
Trigger: CGCCTCTACAATTTGGATGTGTTCCAGTATGAGCTGTACAACCCAATGGCCTTGTATGGGTCTGTGCCTGTGCTCCTGGCACACAACCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532402.5
3UTR TCA 90 bp AAAGAATATCGCTGGCCCAAGGCATCTCGGATTATATCATTGTGCTaGGATGGTAACAGCCATGGCTCTCGTCGCCCAGTGTCCAAGTGG +
Preference number: 1 (lower is better)
Translates to: KEYRWPKASRIISLC*DGNSHGSRRPVSKW
Trigger: CCACTTGGACACTGGGCGACGAGAGCCATGGCTGTTACCATCTCAGCACAATGATATAATCCGAGATGCCTTGGGCCAGCGATATTCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532402.5
3UTR TCA 90 bp AGAATGAGAATCGACGCAGCAGGAACTCTTGGCGAGTCTGATAGTTaGACGTGTGCCCATCATCCAGAAAGAGCTCTCCTTGAGCTGTAC +
Preference number: 1 (lower is better)
Translates to: RMRIDAAGTLGESDS*TCAHHPERALLELY
Trigger: GTACAGCTCAAGGAGAGCTCTTTCTGGATGATGGGCACACGTTCAACTATCAGACTCGCCAAGAGTTCCTGCTGCGTCGATTCTCATTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532402.5
3UTR CCA 90 bp CTGGTGTTCGTAAGTGAATGTGCTCCAGTTAGAGCAACAGGATGTTaGGGGAATGAAGGGAAAGAGTTGGTATCAATGGAGTGGGAGAGG +
Preference number: 1 (lower is better)
Translates to: LVFVSECAPVRATGC*GNEGKELVSMEWER
Trigger: CCTCTCCCACTCCATTGATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGCTCTAACTGGAGCACATTCACTTACGAACACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
3UTR-3UTR TCA 90 bp TGGCCAGGACAAAGGGGCGTTCCATGCCCCCAGAGCGCTGTCTCAGCCCATCAGAGCCGGAGTCCACCTTaGTGTGGGGGTCTACGATGG +
Preference number: 2 (lower is better)
Translates to: WPGQRGVPCPQSAVSAHQSRSPP*CGGLRW
Trigger: CCATCGTAGACCCCCACATCAAGGTGGACTCCGGCT...CTGATGGGCTGAGACAGCGCTCTGGGGGCATGGAACGCCCCTTTGTCCTGGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000532402.5
3UTR-3UTR CCA 90 bp GTCTACGATGGCCACCAGCTTCCGCCTCTTAGAAGCCAAGCGCTCAAGCATGGTGCCGAGGGAGAAGAGTaGGGGCAACGCCTGGGTTCC +
Preference number: 2 (lower is better)
Translates to: VYDGHQLPPLRSQALKHGAEGEE*GQRLGS
Trigger: GGAACCCAGGCGTTGCCCCCACTCTTCTCCCTCGGC...ACCATGCTTGAGCGCTTGGCTTCTAAGAGGCGGAAGCTGGTGGCCATCGTAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532402.5
3UTR-3UTR CCA 90 bp CTGGCTTGTCGCCATCCCTGGGTGTTTCCTCAGGCTGGGCCCCATCGCCCTCAGAGGGTCCCTCAGCCATaGTTAACTCCACACTGTTCT +
Preference number: 2 (lower is better)
Translates to: LACRHPWVFPQAGPHRPQRVPQP*LTPHCS
Trigger: AGAACAGTGTGGAGTTAACCATGGCTGAGGGACCCT...CTGAGGGCGATGGGGCCCAGCCTGAGGAAACACCCAGGGATGGCGACAAGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532402.5
ENST00000534613.5
3UTR-3UTR GCA 90 bp CTGGCTTGTCGCCATCCCTGGGTGTTTCCTCAGGCTGGGCCCCATCGCCCTCAGAAGGCGGAATGGCCGTaGTGTCAAGATGATCTTGTA +
Preference number: 2 (lower is better)
Translates to: LACRHPWVFPQAGPHRPQKAEWP*CQDDLV
Trigger: TACAAGATCATCTTGACAGCACGGCCATTCCGCCTT...CTGAGGGCGATGGGGCCCAGCCTGAGGAAACACCCAGGGATGGCGACAAGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532402.5
ENST00000534613.5
3UTR-3UTR TCA 90 bp ACATCCAGCGAACATCTGTCTGTGGGGTCTCCCCAGAGCCCTGCAGGTAGTCCAGCCGTGCTGTCAAGATaGTCTTGTAGGGTCCCTCAG +
Preference number: 2 (lower is better)
Translates to: TSSEHLSVGSPQSPAGSPAVLSR*SCRVPQ
Trigger: CTGAGGGACCCTACAAGATCATCTTGACAGCACGGC...TGGACTACCTGCAGGGCTCTGGGGAGACCCCACAGACAGATGTTCGCTGGATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532402.5
3UTR-3UTR CCA 90 bp CTGAAGACCGCCGCACTCGCATCCATCGAGGCACGATTGTCCCTCCACGCTGGATCCAGACAAAGAGGTTaGGAGCTGAGCCCTCATAAT +
Preference number: 2 (lower is better)
Translates to: LKTAALASIEARLSLHAGSRQRG*ELSPHN
Trigger: ATTATGAGGGCTCAGCTCCCAACCTCTTTGTCTGGA...TCCAGCGTGGAGGGACAATCGTGCCTCGATGGATGCGAGTGCGGCGGTCTTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532402.5
3UTR-3UTR CCA 90 bp GAGGTCTCAGGGTCATGCTGGAAGGACAGGCGGCTTTCTGGAGATCCTTTTGTCCAGGGTCTGCTGAGCTaGAGACAAGGGTGTTGCCAG +
Preference number: 2 (lower is better)
Translates to: EVSGSCWKDRRLSGDPFVQGLLS*RQGCCQ
Trigger: CTGGCAACACCCTTGTCTCCAGCTCAGCAGACCCTG...GACAAAAGGATCTCCAGAAAGCCGCCTGTCCTTCCAGCATGACCCTGAGACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532402.5
3UTR-3UTR CCA 90 bp TGGCTCATCTTTCTCTGCCTTCCCCTGAGTCTCCTCTGGCTTGTCGCCATCCCTAGCATAAGTGAAGTCTaGGGAGGGCCGAACTCCAAG +
Preference number: 2 (lower is better)
Translates to: WLIFLCLPLSLLWLVAIPSISEV*GGPNSK
Trigger: CTTGGAGTTCGGCCCTCCCCAGACTTCACTTATGCT...AGGGATGGCGACAAGCCAGAGGAGACTCAGGGGAAGGCAGAGAAAGATGAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532402.5
3UTR-3UTR CCA 90 bp TCTGGCTTGTCGCCATCCCTGGGTGTTTCCTCAGGCTGGGCCCCATCGCCCTCAATGAAGGGAAAGAGTTaGTATCAATGGAGTGGGAGA +
Preference number: 2 (lower is better)
Translates to: SGLSPSLGVSSGWAPSPSMKGKS*YQWSGR
Trigger: TCTCCCACTCCATTGATACCAACTCTTTCCCTTCAT...TGAGGGCGATGGGGCCCAGCCTGAGGAAACACCCAGGGATGGCGACAAGCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532402.5
3UTR CAA 90 bp TCATACATTCTGAAGACCGCCGCACTCGCATCCATCGAGGCACGATaGTCCCTCCACGCTGGAACACAGGGATACTGCTTAGAGTTACAG +
Preference number: 2 (lower is better)
Translates to: SYILKTAALASIEAR*SLHAGTQGYCLELQ
Trigger: CTGTAACTCTAAGCAGTATCCCTGTGTTCCAGCGTGGAGGGACAATCGTGCCTCGATGGATGCGAGTGCGGCGGTCTTCAGAATGTATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532402.5
3UTR CAA 90 bp CTGCTGGCTTTCCAGCCCCTATTATCACCACCCGCTCAATCCAGATaGGTGTCTCAAAGTGTCCTTCAGGGTCTGCTGAGCTGGAGACAA +
Preference number: 2 (lower is better)
Translates to: LLAFQPLLSPPAQSR*VSQSVLQGLLSWRQ
Trigger: TTGTCTCCAGCTCAGCAGACCCTGAAGGACACTTTGAGACACCAATCTGGATTGAGCGGGTGGTGATAATAGGGGCTGGAAAGCCAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532402.5
3UTR-3UTR CCA 90 bp GAGATCACAAGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATAGCATAAGTGAAGTCTaGGGAGGGCCGAACTCCAAG +
Preference number: 2 (lower is better)
Translates to: EITRGIWSPGSALSSCPNSISEV*GGPNSK
Trigger: CTTGGAGTTCGGCCCTCCCCAGACTTCACTTATGCT...ATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCTTGTGATCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
3UTR-3UTR CCA 90 bp AGGGGCCCTCTGATGCTCAAACTCCAAGAGTCCTCGGGCATTGACACTAAGCAAAGCCACCAAAACATCTaGTACACGGTATCGGGGTCG +
Preference number: 2 (lower is better)
Translates to: RGPLMLKLQESSGIDTKQSHQNI*YTVSGS
Trigger: CGACCCCGATACCGTGTACCAGATGTTTTGGTGGCT...TTGCTTAGTGTCAATGCCCGAGGACTCTTGGAGTTTGAGCATCAGAGGGCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000526210.1
ENST00000529737.5
ENST00000532402.5
ENST00000534613.5
3UTR-3UTR CCA 90 bp AGCAAAAGACTTCGGTCCTCTAGTAGGTCAAGGCGGAATGGCCGTGCTGTCAAGAGCCACCAAAACATCTaGTACACGGTATCGGGGTCG +
Preference number: 2 (lower is better)
Translates to: SKRLRSSSRSRRNGRAVKSHQNI*YTVSGS
Trigger: CGACCCCGATACCGTGTACCAGATGTTTTGGTGGCT...CTTGACAGCACGGCCATTCCGCCTTGACCTACTAGAGGACCGAAGTCTTTTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000526210.1
ENST00000529737.5
ENST00000532402.5
ENST00000534613.5
3UTR-3UTR CCA 90 bp CAGGCAGGTACAGGGTCTGGGGACCATGATGCTTCTGGTAGCTTTGAATGTCATCTCCTCCCAGGCTCCTaGCTCATCTTTCTCTGCCTT +
Preference number: 2 (lower is better)
Translates to: QAGTGSGDHDASGSFECHLLPGS*LIFLCL
Trigger: AAGGCAGAGAAAGATGAGCCAGGAGCCTGGGAGGAG...ATGACATTCAAAGCTACCAGAAGCATCATGGTCCCCAGACCCTGTACCTGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532402.5
3UTR CAA 90 bp GAGGGTTGTGTGCCAGGAGCACAGGCACAGACCCATACAAGGCCATaGGGTTGTACAGCTCATACTGGAACACATCCAAATTGTAGAGGC +
Preference number: 2 (lower is better)
Translates to: EGCVPGAQAQTHTRP*GCTAHTGTHPNCRG
Trigger: GCCTCTACAATTTGGATGTGTTCCAGTATGAGCTGTACAACCCAATGGCCTTGTATGGGTCTGTGCCTGTGCTCCTGGCACACAACCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532402.5
3UTR-3UTR TCA 90 bp GTACCACAGCTGCTGGCTTTCCAGCCCCTATTATCACCACCCGCTCAATCCAGAAGGATGTTGGGGGAATaGAGGGAAAGAGTTGGTATC +
Preference number: 2 (lower is better)
Translates to: VPQLLAFQPLLSPPAQSRRMLGE*RERVGI
Trigger: GATACCAACTCTTTCCCTTCATTCCCCCAACATCCT...TCTGGATTGAGCGGGTGGTGATAATAGGGGCTGGAAAGCCAGCAGCTGTGGTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532402.5
3UTR-3UTR TCA 90 bp ATTGGTGGATCAGCCACCAAAACATCTGGTACACGGTATCGGGGTCGCCGAGGCCCAGCTCATCAATCCTaGACCGAGTCATGTTCTTTT +
Preference number: 2 (lower is better)
Translates to: IGGSATKTSGTRYRGRRGPAHQS*TESCSF
Trigger: AAAAGAACATGACTCGGTTCAGGATTGATGAGCTGG...GCCTCGGCGACCCCGATACCGTGTACCAGATGTTTTGGTGGCTGATCCACCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526210.1
ENST00000529737.5
ENST00000532402.5
ENST00000534613.5
3UTR-3UTR CCA 90 bp ACACTAAGCAAAAGACTTCGGTCCTCTAGTAGGTCAAGGCGGAATGGCCGTGCTATCACAAGAGGAATTTaGAGCCCAGGGTCAGCCCTC +
Preference number: 2 (lower is better)
Translates to: TLSKRLRSSSRSRRNGRAITRGI*SPGSAL
Trigger: GAGGGCTGACCCTGGGCTCCAAATTCCTCTTGTGAT...AGCACGGCCATTCCGCCTTGACCTACTAGAGGACCGAAGTCTTTTGCTTAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532402.5
3UTR-3UTR CCA 90 bp CTAAGCAAAAGACTTCGGTCCTCTAGTAGGTCAAGGCGGAATGGCCGTGCTGTCAGAAAGCCGGGCTATTaGTGGATCAGCCACCAAAAC +
Preference number: 2 (lower is better)
Translates to: LSKRLRSSSRSRRNGRAVRKPGY*WISHQN
Trigger: GTTTTGGTGGCTGATCCACCAATAGCCCGGCTTTCT...GACAGCACGGCCATTCCGCCTTGACCTACTAGAGGACCGAAGTCTTTTGCTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526210.1
ENST00000529737.5
ENST00000532402.5
ENST00000534613.5
3UTR-3UTR TCA 90 bp CAGGCAGGTACAGGGTCTGGGGACCATGATGCTTCTGGTAGCTTTGAATGTCATCAATGTCTAGCCAGATaGCATCACAGGGCAGGTTGT +
Preference number: 2 (lower is better)
Translates to: QAGTGSGDHDASGSFECHQCLAR*HHRAGC
Trigger: ACAACCTGCCCTGTGATGTCATCTGGCTAGACATTG...ATGACATTCAAAGCTACCAGAAGCATCATGGTCCCCAGACCCTGTACCTGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532402.5
3UTR-3UTR CCA 90 bp GCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATCAATGGAGTGGGAGAGCATAAGTGAAGTCTaGGGAGGGCCGAACTCCAAG +
Preference number: 2 (lower is better)
Translates to: ATGCWGNEGKELVSMEWESISEV*GGPNSK
Trigger: CTTGGAGTTCGGCCCTCCCCAGACTTCACTTATGCT...CTCCCACTCCATTGATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
3UTR-3UTR CCA 90 bp GCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATCAATGGAGTGGGAGATCACAAGAGGAATTTaGAGCCCAGGGTCAGCCCTC +
Preference number: 2 (lower is better)
Translates to: ATGCWGNEGKELVSMEWEITRGI*SPGSAL
Trigger: GAGGGCTGACCCTGGGCTCCAAATTCCTCTTGTGAT...CTCCCACTCCATTGATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
3UTR-3UTR CCA 90 bp TTGACACTAAGCAAAAGACTTCGGTCCTCTAGTAGGTCAAGGCGGAATGGCCGTAGCCACCAAAACATCTaGTACACGGTATCGGGGTCG +
Preference number: 2 (lower is better)
Translates to: LTLSKRLRSSSRSRRNGRSHQNI*YTVSGS
Trigger: CGACCCCGATACCGTGTACCAGATGTTTTGGTGGCT...ACGGCCATTCCGCCTTGACCTACTAGAGGACCGAAGTCTTTTGCTTAGTGTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000526210.1
ENST00000529737.5
ENST00000532402.5
ENST00000534613.5
3UTR-3UTR GCA 90 bp GCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATCAATGGAGTGGGAGTCAGCCCTCTCATCCTaGCCAAATGTTGGCAGAATC +
Preference number: 2 (lower is better)
Translates to: ATGCWGNEGKELVSMEWESALSS*PNVGRI
Trigger: GATTCTGCCAACATTTGGGCAGGATGAGAGGGCTGA...CTCCCACTCCATTGATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
3UTR-3UTR CCA 90 bp GTGCTCCAGTTAGAGCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATATCACAAGAGGAATTTaGAGCCCAGGGTCAGCCCTC +
Preference number: 2 (lower is better)
Translates to: VLQLEQQDVGGMKGKSWYITRGI*SPGSAL
Trigger: GAGGGCTGACCCTGGGCTCCAAATTCCTCTTGTGAT...ATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGCTCTAACTGGAGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
3UTR-3UTR CCA 90 bp CAGGCAGGTACAGGGTCTGGGGACCATGATGCTTCTGGTAGCTTTGAATGTCATCCCATACAAGGCCATTaGGTTGTACAGCTCATACTG +
Preference number: 2 (lower is better)
Translates to: QAGTGSGDHDASGSFECHPIQGH*VVQLIL
Trigger: CAGTATGAGCTGTACAACCCAATGGCCTTGTATGGG...ATGACATTCAAAGCTACCAGAAGCATCATGGTCCCCAGACCCTGTACCTGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532402.5
3UTR-3UTR TCA 90 bp ATATTGCCGGAAAACATCAGAGATGGAGGGCCCCAGCAGCAGGAAGACGTCAATCCAGCTCATCAATCCTaGACCGAGTCATGTTCTTTT +
Preference number: 2 (lower is better)
Translates to: ILPENIRDGGPQQQEDVNPAHQS*TESCSF
Trigger: AAAAGAACATGACTCGGTTCAGGATTGATGAGCTGG...ATTGACGTCTTCCTGCTGCTGGGGCCCTCCATCTCTGATGTTTTCCGGCAATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532402.5
3UTR-3UTR CCA 90 bp ATATTGCCGGAAAACATCAGAGATGGAGGGCCCCAGCAGCAGGAAGACGTCAATATCCTGCCCAAATGTTaGCAGAATCTGGGTCTTAGA +
Preference number: 2 (lower is better)
Translates to: ILPENIRDGGPQQQEDVNILPKC*QNLGLR
Trigger: TCTAAGACCCAGATTCTGCCAACATTTGGGCAGGAT...ATTGACGTCTTCCTGCTGCTGGGGCCCTCCATCTCTGATGTTTTCCGGCAATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532402.5
3UTR-3UTR CCA 90 bp CCTCTGATGCTCAAACTCCAAGAGTCCTCGGGCATTGACACTAAGCAAAAGACTAGAGCAACAGGATGTTaGGGGAATGAAGGGAAAGAG +
Preference number: 2 (lower is better)
Translates to: PLMLKLQESSGIDTKQKTRATGC*GNEGKE
Trigger: CTCTTTCCCTTCATTCCCCCAACATCCTGTTGCTCT...AGTCTTTTGCTTAGTGTCAATGCCCGAGGACTCTTGGAGTTTGAGCATCAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532402.5
3UTR-3UTR CCA 90 bp GTGCTCCAGTTAGAGCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATATCCTGCCCAAATGTTaGCAGAATCTGGGTCTTAGA +
Preference number: 2 (lower is better)
Translates to: VLQLEQQDVGGMKGKSWYILPKC*QNLGLR
Trigger: TCTAAGACCCAGATTCTGCCAACATTTGGGCAGGAT...ATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGCTCTAACTGGAGCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
3UTR CCA 72 bp CGGCTCCAAAGCGCTGGGAGCCAGCGAAGAAGGCCCTaGCCAGGACAAAGGGGCGTTCCATGCCCCCAGAGC +
Preference number: 3 (lower is better)
Translates to: RLQSAGSQRRRP*PGQRGVPCPQS
Trigger: GCTCTGGGGGCATGGAACGCCCCTTTGTCCTGGCCAGGGCCTTCTTCGCTGGCTCCCAGCGCTTTGGAGCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532402.5
3UTR GCA 72 bp CGAAGAAGGCCCTGGCCAGGACAAAGGGGCGTTCCATaGCCCCAGAGCGCTGTCTCAGCCCATCAGCAGTCG +
Preference number: 3 (lower is better)
Translates to: RRRPWPGQRGVP*PQSAVSAHQQS
Trigger: CGACTGCTGATGGGCTGAGACAGCGCTCTGGGGGCATGGAACGCCCCTTTGTCCTGGCCAGGGCCTTCTTCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532402.5
3UTR CCA 72 bp CCTTCCCCTGAGTCTCCTCTGGCTTGTCGCCATCCCTaGGTGTTTCCTCAGGCTGGGCCCCATCGCCCTCAG +
Preference number: 3 (lower is better)
Translates to: PSPESPLACRHP*VFPQAGPHRPQ
Trigger: CTGAGGGCGATGGGGCCCAGCCTGAGGAAACACCCAGGGATGGCGACAAGCCAGAGGAGACTCAGGGGAAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532402.5
ENST00000534613.5
3UTR TCA 72 bp GCAGCTCCTCGTGAACTCGGTAGCCGGAGTCCACCTTaGTGTGGGGGTCTACGATGGCCACCAGCTTCCGCC +
Preference number: 3 (lower is better)
Translates to: AAPRELGSRSPP*CGGLRWPPASA
Trigger: GGCGGAAGCTGGTGGCCATCGTAGACCCCCACATCAAGGTGGACTCCGGCTACCGAGTTCACGAGGAGCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532402.5
3UTR TCA 72 bp TCCCAGGCTCCTGGCTCATCTTTCTCTGCCTTCCCCTaGGTCTCCTCTGGCTTGTCGCCATCCCTGGGTGTT +
Preference number: 3 (lower is better)
Translates to: SQAPGSSFSAFP*VSSGLSPSLGV
Trigger: AACACCCAGGGATGGCGACAAGCCAGAGGAGACTCAGGGGAAGGCAGAGAAAGATGAGCCAGGAGCCTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532402.5
ENST00000534613.5
3UTR CCA 72 bp AAGCCGGGCTATTGGTGGATCAGCCACCAAAACATCTaGTACACGGTATCGGGGTCGCCGAGGCTCCAGCTC +
Preference number: 3 (lower is better)
Translates to: KPGYWWISHQNI*YTVSGSPRLQL
Trigger: GAGCTGGAGCCTCGGCGACCCCGATACCGTGTACCAGATGTTTTGGTGGCTGATCCACCAATAGCCCGGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526210.1
ENST00000529737.5
ENST00000532402.5
ENST00000534613.5
3UTR CCA 72 bp TCGCCCAGTGTCCAAGTGGGCATGTGCCCGGAAGAATaGCTGGTAAGCACCCATCTGGTACCAGCGCACAAG +
Preference number: 3 (lower is better)
Translates to: SPSVQVGMCPEE*LVSTHLVPAHK
Trigger: CTTGTGCGCTGGTACCAGATGGGTGCTTACCAGCCATTCTTCCGGGCACATGCCCACTTGGACACTGGGCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532402.5
3UTR TCA 72 bp CCCAACCCCTGTACTCACGAGACCCTAGGGGCCCTCTaGTGCTCAAACTCCAAGAGTCCTCGGGCATTGACA +
Preference number: 3 (lower is better)
Translates to: PNPCTHETLGAL*CSNSKSPRALT
Trigger: TGTCAATGCCCGAGGACTCTTGGAGTTTGAGCATCAGAGGGCCCCTAGGGTCTCGTGAGTACAGGGGTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526210.1
3UTR TCA 72 bp TCTGCAGCATTGAGCCAGAAGATGCCCAAGTCGCGATaGGGGTTGTGTGCCAGGAGCACAGGCACAGACCCA +
Preference number: 3 (lower is better)
Translates to: SAALSQKMPKSR*GLCARSTGTDP
Trigger: TGGGTCTGTGCCTGTGCTCCTGGCACACAACCCTCATCGCGACTTGGGCATCTTCTGGCTCAATGCTGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532402.5
3UTR CCA 72 bp ACCCATCTGGTACCAGCGCACAAGCAGCTCTGGCTCTaGGTTTTTGAAGAAGCCACCCACATCCGCCCCACA +
Preference number: 3 (lower is better)
Translates to: THLVPAHKQLWL*VFEEATHIRPT
Trigger: TGTGGGGCGGATGTGGGTGGCTTCTTCAAAAACCCAGAGCCAGAGCTGCTTGTGCGCTGGTACCAGATGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532402.5
3UTR TCA 72 bp TGGTGCGGGGCTGAGGGAAGCGACTGGGGTCCCAGGTaGAATACCGCTTGCCATCAGCATGTTCAATGTCTA +
Preference number: 3 (lower is better)
Translates to: WCGAEGSDWGPR*NTACHQHVQCL
Trigger: TAGACATTGAACATGCTGATGGCAAGCGGTATTTCACCTGGGACCCCAGTCGCTTCCCTCAGCCCCGCACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532402.5
3UTR TCA 72 bp GGTACCAGCGCACAAGCAGCTCTGGCTCTGGGTTTTTaGAGAAGCCACCCACATCCGCCCCACAGAAGGAAA +
Preference number: 3 (lower is better)
Translates to: GTSAQAALALGF*RSHPHPPHRRK
Trigger: TTTCCTTCTGTGGGGCGGATGTGGGTGGCTTCTTCAAAAACCCAGAGCCAGAGCTGCTTGTGCGCTGGTACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532402.5
3UTR GCA 72 bp GGCTTGCGCAGGACCAACACAGAGGTCTCAGGGTCATaGTGGAAGGACAGGCGGCTTTCTGGAGATCCTTTT +
Preference number: 3 (lower is better)
Translates to: GLRRTNTEVSGS*WKDRRLSGDPF
Trigger: AAAAGGATCTCCAGAAAGCCGCCTGTCCTTCCAGCATGACCCTGAGACCTCTGTGTTGGTCCTGCGCAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532402.5
3UTR TCA 72 bp GGGTCTTTTGATCCTTGCGAGACCCTAGGGGCCCTCTaGTGCTCAAACTCCAAGAGTCCTCGGGCATTGACA +
Preference number: 3 (lower is better)
Translates to: GSFDPCETLGAL*CSNSKSPRALT
Trigger: TGTCAATGCCCGAGGACTCTTGGAGTTTGAGCATCAGAGGGCCCCTAGGGTCTCGCAAGGATCAAAAGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532402.5
3UTR TCA 72 bp AGGCAGATAGACCTGGACACCATGGGCTCCAGAGTCTaGTACAGGGTGAACCAGCAACGCATCCCCAAGCAA +
Preference number: 3 (lower is better)
Translates to: RQIDLDTMGSRV*YRVNQQRIPKQ
Trigger: TTGCTTGGGGATGCGTTGCTGGTTCACCCTGTATCAGACTCTGGAGCCCATGGTGTCCAGGTCTATCTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532402.5
3UTR CCA 72 bp ACTCGCATCCATCGAGGCACGATTGTCCCTCCACGCTaGAACACAGGGATACTGCTTAGAGTTACAGGCAGG +
Preference number: 3 (lower is better)
Translates to: TRIHRGTIVPPR*NTGILLRVTGR
Trigger: CCTGCCTGTAACTCTAAGCAGTATCCCTGTGTTCCAGCGTGGAGGGACAATCGTGCCTCGATGGATGCGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532402.5
3UTR CCA 72 bp TTGCGCAGGACCAACACAGAGGTCTCAGGGTCATGCTaGAAGGACAGGCGGCTTTCTGGAGATCCTTTTGTC +
Preference number: 3 (lower is better)
Translates to: LRRTNTEVSGSC*KDRRLSGDPFV
Trigger: GACAAAAGGATCTCCAGAAAGCCGCCTGTCCTTCCAGCATGACCCTGAGACCTCTGTGTTGGTCCTGCGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532402.5
3UTR TCA 72 bp AGGGGCCTCATGACAGGAATGCCTTCCCGATGGGCCTaGTATAAGAGGGTGTACCAGAAGGGCAGCAAAGAA +
Preference number: 3 (lower is better)
Translates to: RGLMTGMPSRWA*YKRVYQKGSKE
Trigger: TTCTTTGCTGCCCTTCTGGTACACCCTCTTATATCAGGCCCATCGGGAAGGCATTCCTGTCATGAGGCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532402.5
3UTR-3UTR CAA 90 bp CAGGCAGGTACAGGGTCTGGGGACCATGATGCTTCTGGTAGCTTTGAATGTCATACCTTCAGCCTCAGGTaGTCTGCATGCTCAGGGATC +
Preference number: 3 (lower is better)
Translates to: QAGTGSGDHDASGSFECHTFSLR*SACSGI
Trigger: GATCCCTGAGCATGCAGACAACCTGAGGCTGAAGGT...ATGACATTCAAAGCTACCAGAAGCATCATGGTCCCCAGACCCTGTACCTGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532402.5
3UTR TCA 72 bp CTAGTAGGTCAAGGCGGAATGGCCGTGCTGTCAAGATaGTCTTGTAGGGTCCCTCAGCCATGGTTAACTCCA +
Preference number: 3 (lower is better)
Translates to: LVGQGGMAVLSR*SCRVPQPWLTP
Trigger: TGGAGTTAACCATGGCTGAGGGACCCTACAAGATCATCTTGACAGCACGGCCATTCCGCCTTGACCTACTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000526210.1
ENST00000529737.5
ENST00000532402.5
ENST00000534613.5
3UTR TCA 72 bp ACATGGGGCCATACGGCTTGCTGTCAGAGTGAGTTTTaGATGTCTCCTCCCAGGCTCCTGGCTCATCTTTCT +
Preference number: 3 (lower is better)
Translates to: TWGHTACCQSEF*MSPPRLLAHLS
Trigger: AGAAAGATGAGCCAGGAGCCTGGGAGGAGACATTCAAAACTCACTCTGACAGCAAGCCGTATGGCCCCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532402.5
ENST00000534613.5
3UTR TCA 72 bp CCCCCTAACCCAGAACATCCCTTGGGTTATCGCAGGTaGATACTCCAATCAGATGCCACATTGATGCCAGGC +
Preference number: 3 (lower is better)
Translates to: PPNPEHPLGYRR*ILQSDATLMPG
Trigger: GCCTGGCATCAATGTGGCATCTGATTGGAGTATTCACCTGCGATAACCCAAGGGATGTTCTGGGTTAGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532402.5
3UTR-3UTR CAA 90 bp GCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATCAATGGAGTGGGAGGATCACAAGAGGAATTaGGAGCCCAGGGTCAGCCCT +
Preference number: 3 (lower is better)
Translates to: ATGCWGNEGKELVSMEWEDHKRN*EPRVSP
Trigger: AGGGCTGACCCTGGGCTCCAAATTCCTCTTGTGATC...CTCCCACTCCATTGATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
3UTR-3UTR CAA 90 bp GTGCTCCAGTTAGAGCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATGATCACAAGAGGAATTaGGAGCCCAGGGTCAGCCCT +
Preference number: 3 (lower is better)
Translates to: VLQLEQQDVGGMKGKSWYDHKRN*EPRVSP
Trigger: AGGGCTGACCCTGGGCTCCAAATTCCTCTTGTGATC...ATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGCTCTAACTGGAGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
3UTR-3UTR CAA 90 bp CAGGCAGGTACAGGGTCTGGGGACCATGATGCTTCTGGTAGCTTTGAATGTCATGTGACCTCAGGACCATaGAACACAGATGGTTCGTTC +
Preference number: 3 (lower is better)
Translates to: QAGTGSGDHDASGSFECHVTSGP*NTDGSF
Trigger: GAACGAACCATCTGTGTTCAATGGTCCTGAGGTCAC...ATGACATTCAAAGCTACCAGAAGCATCATGGTCCCCAGACCCTGTACCTGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532402.5
3UTR TCA 72 bp TTAACCTTATCCGAGAAAGAGACCCTAGGGGCCCTCTaGTGCTCAAACTCCAAGAGTCCTCGGGCATTGACA +
Preference number: 3 (lower is better)
Translates to: LTLSEKETLGAL*CSNSKSPRALT
Trigger: TGTCAATGCCCGAGGACTCTTGGAGTTTGAGCATCAGAGGGCCCCTAGGGTCTCTTTCTCGGATAAGGTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534613.5
3UTR TCA 72 bp ATCGACGCAGCAGGAACTCTTGGCGAGTCTGATAGTTaGACGTGTGCCCATCATCCAGAAAGAGCTCTCCTT +
Preference number: 3 (lower is better)
Translates to: IDAAGTLGESDS*TCAHHPERALL
Trigger: AAGGAGAGCTCTTTCTGGATGATGGGCACACGTTCAACTATCAGACTCGCCAAGAGTTCCTGCTGCGTCGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532402.5
3UTR TCA 72 bp GTTATCGCAGGTGAATACTCCAATCAGATGCCACATTaGTGCCAGGCTTGCGCAGGACCAACACAGAGGTCT +
Preference number: 3 (lower is better)
Translates to: VIAGEYSNQMPH*CQACAGPTQRS
Trigger: AGACCTCTGTGTTGGTCCTGCGCAAGCCTGGCATCAATGTGGCATCTGATTGGAGTATTCACCTGCGATAAC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532402.5
3UTR-3UTR CAA 90 bp CCTCTGATGCTCAAACTCCAAGAGTCCTCGGGCATTGACACTAAGCAAAAGACTCAGAAAGCCGGGCTATaGGTGGATCAGCCACCAAAA +
Preference number: 3 (lower is better)
Translates to: PLMLKLQESSGIDTKQKTQKAGL*VDQPPK
Trigger: TTTTGGTGGCTGATCCACCAATAGCCCGGCTTTCTG...AGTCTTTTGCTTAGTGTCAATGCCCGAGGACTCTTGGAGTTTGAGCATCAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000526210.1
ENST00000529737.5
ENST00000532402.5
ENST00000534613.5
3UTR-3UTR CAA 90 bp CAGGCAGGTACAGGGTCTGGGGACCATGATGCTTCTGGTAGCTTTGAATGTCATACCCATACAAGGCCATaGGGTTGTACAGCTCATACT +
Preference number: 3 (lower is better)
Translates to: QAGTGSGDHDASGSFECHTHTRP*GCTAHT
Trigger: AGTATGAGCTGTACAACCCAATGGCCTTGTATGGGT...ATGACATTCAAAGCTACCAGAAGCATCATGGTCCCCAGACCCTGTACCTGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532402.5
3UTR TCA 72 bp ACCGCTTGCCATCAGCATGTTCAATGTCTAGCCAGATaGCATCACAGGGCAGGTTGTGATCATCAAAGCCCT +
Preference number: 3 (lower is better)
Translates to: TACHQHVQCLAR*HHRAGCDHQSP
Trigger: AGGGCTTTGATGATCACAACCTGCCCTGTGATGTCATCTGGCTAGACATTGAACATGCTGATGGCAAGCGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532402.5
3UTR-3UTR CAA 90 bp TGGCTCATCTTTCTCTGCCTTCCCCTGAGTCTCCTCTGGCTTGTCGCCATCCCTCTAGAGAAAAGGTTCTaGATCTTATCCCATATGCTA +
Preference number: 3 (lower is better)
Translates to: WLIFLCLPLSLLWLVAIPLEKRF*ILSHML
Trigger: TAGCATATGGGATAAGATCAAGAACCTTTTCTCTAG...AGGGATGGCGACAAGCCAGAGGAGACTCAGGGGAAGGCAGAGAAAGATGAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534613.5
3UTR CCA 72 bp GTAAGTGAATGTGCTCCAGTTAGAGCAACAGGATGTTaGGGGAATGAAGGGAAAGAGTTGGTATCAATGGAG +
Preference number: 3 (lower is better)
Translates to: VSECAPVRATGC*GNEGKELVSME
Trigger: CTCCATTGATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGCTCTAACTGGAGCACATTCACTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp TCTGGCTTGTCGCCATCCCTGGGTGTTTCCTCAGGCTGGGCCCCATCGCCCTCACCAAGCGCTCAAGCATaGTGCGGGGCTGAGGGAAGC +
Preference number: 4 (lower is better)
Translates to: SGLSPSLGVSSGWAPSPSPSAQA*CGAEGS
Trigger: GCTTCCCTCAGCCCCGCACCATGCTTGAGCGCTTGG...TGAGGGCGATGGGGCCCAGCCTGAGGAAACACCCAGGGATGGCGACAAGCCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532402.5
CDS-3UTR TCA 90 bp AGCCAGCGAAGAAGGCCCTGGCCAGGACAAAGGGGCGTTCCATGCCCCCAGAGCAAGGTAGTCACATCCTaGGGGTACTGCACCCACAGG +
Preference number: 4 (lower is better)
Translates to: SQRRRPWPGQRGVPCPQSKVVTS*GYCTHR
Trigger: CCTGTGGGTGCAGTACCCTCAGGATGTGACTACCTT...GCTCTGGGGGCATGGAACGCCCCTTTGTCCTGGCCAGGGCCTTCTTCGCTGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000532402.5
CDS-3UTR CCA 90 bp TGTCGCCATCCCTGGGTGTTTCCTCAGGCTGGGCCCCATCGCCCTCAGCTGGGTCCAAACCCACAGACATaGGGCCATACGGCTTGCTGT +
Preference number: 4 (lower is better)
Translates to: CRHPWVFPQAGPHRPQLGPNPQT*GHTACC
Trigger: ACAGCAAGCCGTATGGCCCCATGTCTGTGGGTTTGG...ACCCAGCTGAGGGCGATGGGGCCCAGCCTGAGGAAACACCCAGGGATGGCGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532402.5
ENST00000534613.5
CDS-3UTR CCA 90 bp GTGGATCAGCCACCAAAACATCTGGTACACGGTATCGGGGTCGCCGAGGCTCCACCCCTGAGTCTCCTCTaGCTTGTCGCCATCCCTGGG +
Preference number: 4 (lower is better)
Translates to: VDQPPKHLVHGIGVAEAPPLSLL*LVAIPG
Trigger: CCCAGGGATGGCGACAAGCCAGAGGAGACTCAGGGG...TGGAGCCTCGGCGACCCCGATACCGTGTACCAGATGTTTTGGTGGCTGATCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000532402.5
ENST00000534613.5
CDS-3UTR CCA 90 bp TGGATCAGCCACCAAAACATCTGGTACACGGTATCGGGGTCGCCGAGGCTCCAGACGGCTCCAAAGCGCTaGGAGCCAGCGAAGAAGGCC +
Preference number: 4 (lower is better)
Translates to: WISHQNIWYTVSGSPRLQTAPKR*EPAKKA
Trigger: GGCCTTCTTCGCTGGCTCCCAGCGCTTTGGAGCCGT...CTGGAGCCTCGGCGACCCCGATACCGTGTACCAGATGTTTTGGTGGCTGATCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532402.5
CDS-3UTR TCA 90 bp GCACCAGCCCTCATAGTCAGAGCCATCCCGGGTTTTAACATACAGCCCCAGGTTGTCAGGGTAACCAGCTaGGCCTGGCCAGCACCAGCC +
Preference number: 4 (lower is better)
Translates to: APALIVRAIPGFNIQPQVVRVTS*AWPAPA
Trigger: GGCTGGTGCTGGCCAGGCTCAGCTGGTTACCCTGAC...AACCTGGGGCTGTATGTTAAAACCCGGGATGGCTCTGACTATGAGGGCTGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532402.5
CDS-3UTR CCA 90 bp AGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGAGCCGAGGGAGAAGAGTaGGGGCAACGCCTGGGTTCC +
Preference number: 4 (lower is better)
Translates to: RGIWSPGSALSSCPNVGRAEGEE*GQRLGS
Trigger: GGAACCCAGGCGTTGCCCCCACTCTTCTCCCTCGGC...TCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp AGCCAGCGAAGAAGGCCCTGGCCAGGACAAAGGGGCGTTCCATGCCCCCAGAGCGAGTACCACAGCTGCTaGCTTTCCAGCCCCTATTAT +
Preference number: 4 (lower is better)
Translates to: SQRRRPWPGQRGVPCPQSEYHSC*LSSPYY
Trigger: ATAATAGGGGCTGGAAAGCCAGCAGCTGTGGTACTC...GCTCTGGGGGCATGGAACGCCCCTTTGTCCTGGCCAGGGCCTTCTTCGCTGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000532402.5
CDS-3UTR TCA 90 bp AGACCGCCGCACTCGCATCCATCGAGGCACGATTGTCCCTCCACGCTGGAACACAGGTCTCTGCAGCATTaGGCCAGAAGATGCCCAAGT +
Preference number: 4 (lower is better)
Translates to: RPPHSHPSRHDCPSTLEHRSLQH*ARRCPS
Trigger: ACTTGGGCATCTTCTGGCTCAATGCTGCAGAGACCT...GTGTTCCAGCGTGGAGGGACAATCGTGCCTCGATGGATGCGAGTGCGGCGGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532402.5
CDS-3UTR TCA 90 bp CCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGAATCTGGGTCTTAGACATGATTGGTTCGACCTaGGCGCCGCCGGGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: PGSALSSCPNVGRIWVLDMIGST*APPGSC
Trigger: ACAGCTGCCCGGCGGCGCTCAGGTCGAACCAATCAT...GTCTAAGACCCAGATTCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540933.5
CDS-3UTR TCA 90 bp AGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGAGCAGAGTTTGCTCCTTaGCCCCAAACCTCCCGCCCC +
Preference number: 4 (lower is better)
Translates to: RGIWSPGSALSSCPNVGRAEFAP*PQTSRP
Trigger: GGGGCGGGAGGTTTGGGGTCAAGGAGCAAACTCTGC...TCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540933.5
CDS-3UTR GCA 90 bp GAGTCTCCTCTGGCTTGTCGCCATCCCTGGGTGTTTCCTCAGGCTGGGCCCCATTGGCTCATCTTTCTCTaGCTTCCCCTGAGTCTCCTC +
Preference number: 4 (lower is better)
Translates to: ESPLACRHPWVFPQAGPHWLIFL*LPLSLL
Trigger: GAGGAGACTCAGGGGAAGGCAGAGAAAGATGAGCCA...ATGGGGCCCAGCCTGAGGAAACACCCAGGGATGGCGACAAGCCAGAGGAGACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532402.5
ENST00000534613.5
CDS-3UTR GCA 90 bp CCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGAATCTGGGTCTTAGACAGCGCTCAAGCATGGTaGGGGGCTGAGGGAAGCGAC +
Preference number: 4 (lower is better)
Translates to: PGSALSSCPNVGRIWVLDSAQAW*GAEGSD
Trigger: GTCGCTTCCCTCAGCCCCGCACCATGCTTGAGCGCT...GTCTAAGACCCAGATTCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR GCA 90 bp TCGGGGTCGCCGAGGCTCCAGCTCATCAATCCTGAACCGAGTCATGTTCTTTTGAGCGCTCAAGCATGGTaGGGGGCTGAGGGAAGCGAC +
Preference number: 4 (lower is better)
Translates to: SGSPRLQLINPEPSHVLLSAQAW*GAEGSD
Trigger: GTCGCTTCCCTCAGCCCCGCACCATGCTTGAGCGCT...CAAAAGAACATGACTCGGTTCAGGATTGATGAGCTGGAGCCTCGGCGACCCCGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000532402.5
CDS-3UTR CCA 90 bp GTCTCCTCTGGCTTGTCGCCATCCCTGGGTGTTTCCTCAGGCTGGGCCCCATCGAGAAAGCCGGGCTATTaGTGGATCAGCCACCAAAAC +
Preference number: 4 (lower is better)
Translates to: VSSGLSPSLGVSSGWAPSRKPGY*WISHQN
Trigger: GTTTTGGTGGCTGATCCACCAATAGCCCGGCTTTCT...CGATGGGGCCCAGCCTGAGGAAACACCCAGGGATGGCGACAAGCCAGAGGAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532402.5
ENST00000534613.5
CDS-3UTR CCA 90 bp ATGCTGGAAGGACAGGCGGCTTTCTGGAGATCCTTTTGTCTGGAGTACCACAGCGCCGAGGGAGAAGAGTaGGGGCAACGCCTGGGTTCC +
Preference number: 4 (lower is better)
Translates to: MLEGQAAFWRSFCLEYHSAEGEE*GQRLGS
Trigger: GGAACCCAGGCGTTGCCCCCACTCTTCTCCCTCGGC...GCTGTGGTACTCCAGACAAAAGGATCTCCAGAAAGCCGCCTGTCCTTCCAGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532402.5
CDS-3UTR CCA 90 bp AGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGACCAAGCGCTCAAGCATaGTGCGGGGCTGAGGGAAGC +
Preference number: 4 (lower is better)
Translates to: RGIWSPGSALSSCPNVGRPSAQA*CGAEGS
Trigger: GCTTCCCTCAGCCCCGCACCATGCTTGAGCGCTTGG...TCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp CCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGAATCTGGGTCTTAGACCCAAGCGCTCAAGCATaGTGCGGGGCTGAGGGAAGC +
Preference number: 4 (lower is better)
Translates to: PGSALSSCPNVGRIWVLDPSAQA*CGAEGS
Trigger: GCTTCCCTCAGCCCCGCACCATGCTTGAGCGCTTGG...GTCTAAGACCCAGATTCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp AGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGAACGGCTCCAAAGCGCTaGGAGCCAGCGAAGAAGGCC +
Preference number: 4 (lower is better)
Translates to: RGIWSPGSALSSCPNVGRTAPKR*EPAKKA
Trigger: GGCCTTCTTCGCTGGCTCCCAGCGCTTTGGAGCCGT...TCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp CCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGAATCTGGGTCTTAGACACGGCTCCAAAGCGCTaGGAGCCAGCGAAGAAGGCC +
Preference number: 4 (lower is better)
Translates to: PGSALSSCPNVGRIWVLDTAPKR*EPAKKA
Trigger: GGCCTTCTTCGCTGGCTCCCAGCGCTTTGGAGCCGT...GTCTAAGACCCAGATTCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp CTGAGTCTCCTCTGGCTTGTCGCCATCCCTGGGTGTTTCCTCAGGCTGGGCCCCATTGTCCCTCCACGCTaGAACACAGGGATACTGCTT +
Preference number: 4 (lower is better)
Translates to: LSLLWLVAIPGCFLRLGPIVPPR*NTGILL
Trigger: AAGCAGTATCCCTGTGTTCCAGCGTGGAGGGACAAT...GGGGCCCAGCCTGAGGAAACACCCAGGGATGGCGACAAGCCAGAGGAGACTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532402.5
CDS-3UTR TCA 90 bp CGGTATCGGGGTCGCCGAGGCTCCAGCTCATCAATCCTGAACCGAGTCATGTTCGGATCAGATGGACCGTaGGGGAATCAGGACCAAGCT +
Preference number: 4 (lower is better)
Translates to: RYRGRRGSSSSILNRVMFGSDGP*GNQDQA
Trigger: AGCTTGGTCCTGATTCCCTCACGGTCCATCTGATCC...GAACATGACTCGGTTCAGGATTGATGAGCTGGAGCCTCGGCGACCCCGATACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529737.5
CDS-3UTR TCA 90 bp GCCACCAAAACATCTGGTACACGGTATCGGGGTCGCCGAGGCTCCAGCTCATCAGCCGTGCTGTCAAGATaGTCTTGTAGGGTCCCTCAG +
Preference number: 4 (lower is better)
Translates to: ATKTSGTRYRGRRGSSSSAVLSR*SCRVPQ
Trigger: CTGAGGGACCCTACAAGATCATCTTGACAGCACGGC...TGATGAGCTGGAGCCTCGGCGACCCCGATACCGTGTACCAGATGTTTTGGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526210.1
ENST00000529737.5
ENST00000532402.5
ENST00000534613.5
CDS-3UTR TCA 90 bp CCCCTGTACTCACGAGACCCTAGGGGCCCTCTGATGCTCAAACTCCAAGAGTCCACCCTAGGGGCCCTCTaGTGCTCAAACTCCAAGAGT +
Preference number: 4 (lower is better)
Translates to: PLYSRDPRGPLMLKLQESTLGAL*CSNSKS
Trigger: ACTCTTGGAGTTTGAGCATCAGAGGGCCCCTAGGGT...GGACTCTTGGAGTTTGAGCATCAGAGGGCCCCTAGGGTCTCGTGAGTACAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000526210.1
CDS-3UTR TCA 90 bp GTGGATCAGCCACCAAAACATCTGGTACACGGTATCGGGGTCGCCGAGGCTCCAACCCTAGGGGCCCTCTaGTGCTCAAACTCCAAGAGT +
Preference number: 4 (lower is better)
Translates to: VDQPPKHLVHGIGVAEAPTLGAL*CSNSKS
Trigger: ACTCTTGGAGTTTGAGCATCAGAGGGCCCCTAGGGT...TGGAGCCTCGGCGACCCCGATACCGTGTACCAGATGTTTTGGTGGCTGATCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000526210.1
ENST00000529737.5
ENST00000532402.5
ENST00000534613.5
CDS-3UTR TCA 90 bp GCACCAGCCCTCATAGTCAGAGCCATCCCGGGTTTTAACATACAGCCCCAGGTTATGCCCAAGTCGCGATaGGGGTTGTGTGCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: APALIVRAIPGFNIQPQVMPKSR*GLCARS
Trigger: GCTCCTGGCACACAACCCTCATCGCGACTTGGGCAT...AACCTGGGGCTGTATGTTAAAACCCGGGATGGCTCTGACTATGAGGGCTGGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532402.5
CDS-3UTR TCA 90 bp CCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGAATCTGGGTCTTAGACATGCCCAAGTCGCGATaGGGGTTGTGTGCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: PGSALSSCPNVGRIWVLDMPKSR*GLCARS
Trigger: GCTCCTGGCACACAACCCTCATCGCGACTTGGGCAT...GTCTAAGACCCAGATTCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR TCA 90 bp CCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGAATCTGGGTCTTAGACAGCCGGAGTCCACCTTaGTGTGGGGGTCTACGATGG +
Preference number: 4 (lower is better)
Translates to: PGSALSSCPNVGRIWVLDSRSPP*CGGLRW
Trigger: CCATCGTAGACCCCCACATCAAGGTGGACTCCGGCT...GTCTAAGACCCAGATTCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR TCA 90 bp CCAAGGCAGAAGAAAGAATATCTCTCAGCACTAATGCTCCCCTTCCCTCCCCCTGTCAGGGTAACCAGCTaGGCCTGGCCAGCACCAGCC +
Preference number: 4 (lower is better)
Translates to: PRQKKEYLSALMLPFPPPVRVTS*AWPAPA
Trigger: GGCTGGTGCTGGCCAGGCTCAGCTGGTTACCCTGAC...AGGGGGAGGGAAGGGGAGCATTAGTGCTGAGAGATATTCTTTCTTCTGCCTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR TCA 90 bp AGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGACCCACAGGGGCCTCATaGCAGGAATGCCTTCCCGAT +
Preference number: 4 (lower is better)
Translates to: RGIWSPGSALSSCPNVGRPTGAS*QECLPD
Trigger: ATCGGGAAGGCATTCCTGTCATGAGGCCCCTGTGGG...TCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR TCA 90 bp AAAACATCTGGTACACGGTATCGGGGTCGCCGAGGCTCCAGCTCATCAATCCTGCCCACAGGGGCCTCATaGCAGGAATGCCTTCCCGAT +
Preference number: 4 (lower is better)
Translates to: KTSGTRYRGRRGSSSSILPTGAS*QECLPD
Trigger: ATCGGGAAGGCATTCCTGTCATGAGGCCCCTGTGGG...CAGGATTGATGAGCTGGAGCCTCGGCGACCCCGATACCGTGTACCAGATGTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532402.5
CDS-3UTR TCA 90 bp CCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGAATCTGGGTCTTAGACCCCACAGGGGCCTCATaGCAGGAATGCCTTCCCGAT +
Preference number: 4 (lower is better)
Translates to: PGSALSSCPNVGRIWVLDPTGAS*QECLPD
Trigger: ATCGGGAAGGCATTCCTGTCATGAGGCCCCTGTGGG...GTCTAAGACCCAGATTCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR TCA 90 bp GGTGGATCAGCCACCAAAACATCTGGTACACGGTATCGGGGTCGCCGAGGCTCCAATCAGATGCCACATTaGTGCCAGGCTTGCGCAGGA +
Preference number: 4 (lower is better)
Translates to: GGSATKTSGTRYRGRRGSNQMPH*CQACAG
Trigger: TCCTGCGCAAGCCTGGCATCAATGTGGCATCTGATT...GGAGCCTCGGCGACCCCGATACCGTGTACCAGATGTTTTGGTGGCTGATCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532402.5
CDS-3UTR TCA 90 bp CTGAGTCTCCTCTGGCTTGTCGCCATCCCTGGGTGTTTCCTCAGGCTGGGCCCCTTGGGTTATCGCAGGTaGATACTCCAATCAGATGCC +
Preference number: 4 (lower is better)
Translates to: LSLLWLVAIPGCFLRLGPLGYRR*ILQSDA
Trigger: GGCATCTGATTGGAGTATTCACCTGCGATAACCCAA...GGGGCCCAGCCTGAGGAAACACCCAGGGATGGCGACAAGCCAGAGGAGACTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532402.5
CDS-3UTR TCA 90 bp GTGGATCAGCCACCAAAACATCTGGTACACGGTATCGGGGTCGCCGAGGCTCCACTCAGCTGGGTCTTTTaGTCCTTGCGAGACCCTAGG +
Preference number: 4 (lower is better)
Translates to: VDQPPKHLVHGIGVAEAPLSWVF*SLRDPR
Trigger: CCTAGGGTCTCGCAAGGATCAAAAGACCCAGCTGAG...TGGAGCCTCGGCGACCCCGATACCGTGTACCAGATGTTTTGGTGGCTGATCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532402.5
CDS-3UTR GCA 90 bp AGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGACAAAGGGGCGTTCCATaGCCCCAGAGCGCTGTCTCA +
Preference number: 4 (lower is better)
Translates to: RGIWSPGSALSSCPNVGRQRGVP*PQSAVS
Trigger: TGAGACAGCGCTCTGGGGGCATGGAACGCCCCTTTG...TCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR GCA 90 bp TGGCTCATCTTTCTCTGCCTTCCCCTGAGTCTCCTCTGGCTTGTCGCCATCCCTGAGGTCTCAGGGTCATaGTGGAAGGACAGGCGGCTT +
Preference number: 4 (lower is better)
Translates to: WLIFLCLPLSLLWLVAIPEVSGS*WKDRRL
Trigger: AAGCCGCCTGTCCTTCCAGCATGACCCTGAGACCTC...AGGGATGGCGACAAGCCAGAGGAGACTCAGGGGAAGGCAGAGAAAGATGAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532402.5
CDS-3UTR CCA 90 bp GGTACACGGTATCGGGGTCGCCGAGGCTCCAGCTCATCAATCCTGAACCGAGTCAGCCACCAAAACATCTaGTACACGGTATCGGGGTCG +
Preference number: 4 (lower is better)
Translates to: GTRYRGRRGSSSSILNRVSHQNI*YTVSGS
Trigger: CGACCCCGATACCGTGTACCAGATGTTTTGGTGGCT...GACTCGGTTCAGGATTGATGAGCTGGAGCCTCGGCGACCCCGATACCGTGTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000526210.1
ENST00000529737.5
ENST00000532402.5
ENST00000534613.5
CDS-3UTR CCA 90 bp AAGCCGGGCTATTGGTGGATCAGCCACCAAAACATCTGGTACACGGTATCGGGGGCTTGTCGCCATCCCTaGGTGTTTCCTCAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: KPGYWWISHQNIWYTVSGACRHP*VFPQAG
Trigger: CCCAGCCTGAGGAAACACCCAGGGATGGCGACAAGC...CCCCGATACCGTGTACCAGATGTTTTGGTGGCTGATCCACCAATAGCCCGGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000532402.5
ENST00000534613.5
CDS-3UTR CCA 90 bp AGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGAGCGAACATCTGTCTGTaGGGTCTCCCCAGAGCCCTG +
Preference number: 4 (lower is better)
Translates to: RGIWSPGSALSSCPNVGRANICL*GLPRAL
Trigger: CAGGGCTCTGGGGAGACCCCACAGACAGATGTTCGC...TCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp CCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGAATCTGGGTCTTAGACGCGAACATCTGTCTGTaGGGTCTCCCCAGAGCCCTG +
Preference number: 4 (lower is better)
Translates to: PGSALSSCPNVGRIWVLDANICL*GLPRAL
Trigger: CAGGGCTCTGGGGAGACCCCACAGACAGATGTTCGC...GTCTAAGACCCAGATTCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp GCACCAGCCCTCATAGTCAGAGCCATCCCGGGTTTTAACATACAGCCCCAGGTTGCGAACATCTGTCTGTaGGGTCTCCCCAGAGCCCTG +
Preference number: 4 (lower is better)
Translates to: APALIVRAIPGFNIQPQVANICL*GLPRAL
Trigger: CAGGGCTCTGGGGAGACCCCACAGACAGATGTTCGC...AACCTGGGGCTGTATGTTAAAACCCGGGATGGCTCTGACTATGAGGGCTGGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532402.5
CDS-3UTR CCA 90 bp AGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGATGTGGGGGTCTACGATaGCCACCAGCTTCCGCCTCT +
Preference number: 4 (lower is better)
Translates to: RGIWSPGSALSSCPNVGRCGGLR*PPASAS
Trigger: AGAGGCGGAAGCTGGTGGCCATCGTAGACCCCCACA...TCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp TCGGGGTCGCCGAGGCTCCAGCTCATCAATCCTGAACCGAGTCATGTTCTTTTGTGTGGGGGTCTACGATaGCCACCAGCTTCCGCCTCT +
Preference number: 4 (lower is better)
Translates to: SGSPRLQLINPEPSHVLLCGGLR*PPASAS
Trigger: AGAGGCGGAAGCTGGTGGCCATCGTAGACCCCCACA...CAAAAGAACATGACTCGGTTCAGGATTGATGAGCTGGAGCCTCGGCGACCCCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000532402.5
CDS-3UTR CCA 90 bp CCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGAATCTGGGTCTTAGACCAGCGAAGAAGGCCCTaGCCAGGACAAAGGGGCGTT +
Preference number: 4 (lower is better)
Translates to: PGSALSSCPNVGRIWVLDQRRRP*PGQRGV
Trigger: AACGCCCCTTTGTCCTGGCCAGGGCCTTCTTCGCTG...GTCTAAGACCCAGATTCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp GAGATCACAAGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATACGGCTCCAAAGCGCTaGGAGCCAGCGAAGAAGGCC +
Preference number: 4 (lower is better)
Translates to: EITRGIWSPGSALSSCPNTAPKR*EPAKKA
Trigger: GGCCTTCTTCGCTGGCTCCCAGCGCTTTGGAGCCGT...ATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCTTGTGATCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp TGGATCAGCCACCAAAACATCTGGTACACGGTATCGGGGTCGCCGAGGCTCCAGGTCTCAGGGTCATGCTaGAAGGACAGGCGGCTTTCT +
Preference number: 4 (lower is better)
Translates to: WISHQNIWYTVSGSPRLQVSGSC*KDRRLS
Trigger: AGAAAGCCGCCTGTCCTTCCAGCATGACCCTGAGAC...CTGGAGCCTCGGCGACCCCGATACCGTGTACCAGATGTTTTGGTGGCTGATCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532402.5
3UTR CAA 72 bp CTGAAGACCGCCGCACTCGCATCCATCGAGGCACGATaGTCCCTCCACGCTGGAACACAGGGATACTGCTTA +
Preference number: 4 (lower is better)
Translates to: LKTAALASIEAR*SLHAGTQGYCL
Trigger: TAAGCAGTATCCCTGTGTTCCAGCGTGGAGGGACAATCGTGCCTCGATGGATGCGAGTGCGGCGGTCTTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532402.5
CDS-3UTR TCA 90 bp GAGATCACAAGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATATGCCCAAGTCGCGATaGGGGTTGTGTGCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: EITRGIWSPGSALSSCPNMPKSR*GLCARS
Trigger: GCTCCTGGCACACAACCCTCATCGCGACTTGGGCAT...ATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCTTGTGATCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR TCA 90 bp AACATCTGGTACACGGTATCGGGGTCGCCGAGGCTCCAGCTCATCAATCCTGAAGACTGGGGTCCCAGGTaGAATACCGCTTGCCATCAG +
Preference number: 4 (lower is better)
Translates to: NIWYTVSGSPRLQLINPEDWGPR*NTACHQ
Trigger: CTGATGGCAAGCGGTATTTCACCTGGGACCCCAGTC...TTCAGGATTGATGAGCTGGAGCCTCGGCGACCCCGATACCGTGTACCAGATGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532402.5
CDS-3UTR TCA 90 bp CTTCGGTCCTCTAGTAGGTCAAGGCGGAATGGCCGTGCTGTCAAGATGATCTTGAGCCGGAGTCCACCTTaGTGTGGGGGTCTACGATGG +
Preference number: 4 (lower is better)
Translates to: LRSSSRSRRNGRAVKMILSRSPP*CGGLRW
Trigger: CCATCGTAGACCCCCACATCAAGGTGGACTCCGGCT...CAAGATCATCTTGACAGCACGGCCATTCCGCCTTGACCTACTAGAGGACCGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532402.5
CDS-3UTR TCA 90 bp GCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATCAATGGAGTGGGAGGTCAGGGTAACCAGCTaGGCCTGGCCAGCACCAGCC +
Preference number: 4 (lower is better)
Translates to: ATGCWGNEGKELVSMEWEVRVTS*AWPAPA
Trigger: GGCTGGTGCTGGCCAGGCTCAGCTGGTTACCCTGAC...CTCCCACTCCATTGATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR TCA 90 bp GAGATCACAAGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATCCCACAGGGGCCTCATaGCAGGAATGCCTTCCCGAT +
Preference number: 4 (lower is better)
Translates to: EITRGIWSPGSALSSCPNPTGAS*QECLPD
Trigger: ATCGGGAAGGCATTCCTGTCATGAGGCCCCTGTGGG...ATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCTTGTGATCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR TCA 90 bp AGACCGCCGCACTCGCATCCATCGAGGCACGATTGTCCCTCCACGCTGGAACACAGGATGTTGGGGGAATaGAGGGAAAGAGTTGGTATC +
Preference number: 4 (lower is better)
Translates to: RPPHSHPSRHDCPSTLEHRMLGE*RERVGI
Trigger: GATACCAACTCTTTCCCTTCATTCCCCCAACATCCT...GTGTTCCAGCGTGGAGGGACAATCGTGCCTCGATGGATGCGAGTGCGGCGGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532402.5
CDS-3UTR GCA 90 bp CCAAGGCAGAAGAAAGAATATCTCTCAGCACTAATGCTCCCCTTCCCTCCCCCTAGCGCTCAAGCATGGTaGGGGGCTGAGGGAAGCGAC +
Preference number: 4 (lower is better)
Translates to: PRQKKEYLSALMLPFPPPSAQAW*GAEGSD
Trigger: GTCGCTTCCCTCAGCCCCGCACCATGCTTGAGCGCT...AGGGGGAGGGAAGGGGAGCATTAGTGCTGAGAGATATTCTTTCTTCTGCCTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR GCA 90 bp GAGATCACAAGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATCAAAGGGGCGTTCCATaGCCCCAGAGCGCTGTCTCA +
Preference number: 4 (lower is better)
Translates to: EITRGIWSPGSALSSCPNQRGVP*PQSAVS
Trigger: TGAGACAGCGCTCTGGGGGCATGGAACGCCCCTTTG...ATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCTTGTGATCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR GCA 90 bp CCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGAATCTGGGTCTTAGACGAGGTCTCAGGGTCATaGTGGAAGGACAGGCGGCTT +
Preference number: 4 (lower is better)
Translates to: PGSALSSCPNVGRIWVLDEVSGS*WKDRRL
Trigger: AAGCCGCCTGTCCTTCCAGCATGACCCTGAGACCTC...GTCTAAGACCCAGATTCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR GCA 90 bp GTCTCCTCTGGCTTGTCGCCATCCCTGGGTGTTTCCTCAGGCTGGGCCCCATCGAGCACCAGCAACACTTaGAGAAAGAACTCTCTTCAC +
Preference number: 4 (lower is better)
Translates to: VSSGLSPSLGVSSGWAPSSTSNT*RKNSLH
Trigger: GTGAAGAGAGTTCTTTCTGCAAGTGTTGCTGGTGCT...CGATGGGGCCCAGCCTGAGGAAACACCCAGGGATGGCGACAAGCCAGAGGAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532402.5
ENST00000534613.5
CDS-3UTR CCA 90 bp CGGGCTATTGGTGGATCAGCCACCAAAACATCTGGTACACGGTATCGGGGTCGCGTATGGAGAGAGGCCTaGCCGTATGCTTCTCTGTCG +
Preference number: 4 (lower is better)
Translates to: RAIGGSATKTSGTRYRGRVWREA*PYASLS
Trigger: CGACAGAGAAGCATACGGCCAGGCCTCTCTCCATAC...GCGACCCCGATACCGTGTACCAGATGTTTTGGTGGCTGATCCACCAATAGCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529737.5
CDS-3UTR CCA 90 bp GAGATCACAAGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATGCTTGTCGCCATCCCTaGGTGTTTCCTCAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: EITRGIWSPGSALSSCPNACRHP*VFPQAG
Trigger: CCCAGCCTGAGGAAACACCCAGGGATGGCGACAAGC...ATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCTTGTGATCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp CTTCGGTCCTCTAGTAGGTCAAGGCGGAATGGCCGTGCTGTCAAGATGATCTTGGCTTGTCGCCATCCCTaGGTGTTTCCTCAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: LRSSSRSRRNGRAVKMILACRHP*VFPQAG
Trigger: CCCAGCCTGAGGAAACACCCAGGGATGGCGACAAGC...CAAGATCATCTTGACAGCACGGCCATTCCGCCTTGACCTACTAGAGGACCGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532402.5
ENST00000534613.5
CDS-3UTR CCA 90 bp TCCAAGGCAGAAGAAAGAATATCTCTCAGCACTAATGCTCCCCTTCCCTCCCCCCCCCTGAGTCTCCTCTaGCTTGTCGCCATCCCTGGG +
Preference number: 4 (lower is better)
Translates to: SKAEERISLSTNAPLPSPPLSLL*LVAIPG
Trigger: CCCAGGGATGGCGACAAGCCAGAGGAGACTCAGGGG...GGGGGAGGGAAGGGGAGCATTAGTGCTGAGAGATATTCTTTCTTCTGCCTTGGA
57% GC, longest homopolymer 9 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp CACAGACATGGGGCCATACGGCTTGCTGTCAGAGTGAGTTTTGAATGTCTCCTCCCCCTGAGTCTCCTCTaGCTTGTCGCCATCCCTGGG +
Preference number: 4 (lower is better)
Translates to: HRHGAIRLAVRVSFECLLPLSLL*LVAIPG
Trigger: CCCAGGGATGGCGACAAGCCAGAGGAGACTCAGGGG...GAGGAGACATTCAAAACTCACTCTGACAGCAAGCCGTATGGCCCCATGTCTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000532402.5
ENST00000534613.5
CDS-3UTR CCA 90 bp CCAAGGCAGAAGAAAGAATATCTCTCAGCACTAATGCTCCCCTTCCCTCCCCCTCCCCTGAGTCTCCTCTaGCTTGTCGCCATCCCTGGG +
Preference number: 4 (lower is better)
Translates to: PRQKKEYLSALMLPFPPPPLSLL*LVAIPG
Trigger: CCCAGGGATGGCGACAAGCCAGAGGAGACTCAGGGG...AGGGGGAGGGAAGGGGAGCATTAGTGCTGAGAGATATTCTTTCTTCTGCCTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp ACGGTATCGGGGTCGCCGAGGCTCCAGCTCATCAATCCTGAACCGAGTCATGTTCTCCTCCCAGGCTCCTaGCTCATCTTTCTCTGCCTT +
Preference number: 4 (lower is better)
Translates to: TVSGSPRLQLINPEPSHVLLPGS*LIFLCL
Trigger: AAGGCAGAGAAAGATGAGCCAGGAGCCTGGGAGGAG...AACATGACTCGGTTCAGGATTGATGAGCTGGAGCCTCGGCGACCCCGATACCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532402.5
ENST00000534613.5
CDS-3UTR CCA 90 bp ATTGGTGGATCAGCCACCAAAACATCTGGTACACGGTATCGGGGTCGCCGAGGCCCAAACCCACAGACATaGGGCCATACGGCTTGCTGT +
Preference number: 4 (lower is better)
Translates to: IGGSATKTSGTRYRGRRGPNPQT*GHTACC
Trigger: ACAGCAAGCCGTATGGCCCCATGTCTGTGGGTTTGG...GCCTCGGCGACCCCGATACCGTGTACCAGATGTTTTGGTGGCTGATCCACCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532402.5
ENST00000534613.5
CDS-3UTR CCA 90 bp TGGATCAGCCACCAAAACATCTGGTACACGGTATCGGGGTCGCCGAGGCTCCAGGACATGCTCCATGCCTaGCAGAGAGAAGTCCAAACC +
Preference number: 4 (lower is better)
Translates to: WISHQNIWYTVSGSPRLQDMLHA*QREVQT
Trigger: GGTTTGGACTTCTCTCTGCCAGGCATGGAGCATGTC...CTGGAGCCTCGGCGACCCCGATACCGTGTACCAGATGTTTTGGTGGCTGATCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532402.5
CDS-3UTR CCA 90 bp GCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATCAATGGAGTGGGAGGCCGAGGGAGAAGAGTaGGGGCAACGCCTGGGTTCC +
Preference number: 4 (lower is better)
Translates to: ATGCWGNEGKELVSMEWEAEGEE*GQRLGS
Trigger: GGAACCCAGGCGTTGCCCCCACTCTTCTCCCTCGGC...CTCCCACTCCATTGATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp GAGATCACAAGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATTGTGGGGGTCTACGATaGCCACCAGCTTCCGCCTCT +
Preference number: 4 (lower is better)
Translates to: EITRGIWSPGSALSSCPNCGGLR*PPASAS
Trigger: AGAGGCGGAAGCTGGTGGCCATCGTAGACCCCCACA...ATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCTTGTGATCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp CCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGAATCTGGGTCTTAGACGAGTCCACCTTGATGTaGGGGTCTACGATGGCCACC +
Preference number: 4 (lower is better)
Translates to: PGSALSSCPNVGRIWVLDESTLM*GSTMAT
Trigger: GGTGGCCATCGTAGACCCCCACATCAAGGTGGACTC...GTCTAAGACCCAGATTCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp AGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGAGAGTCCACCTTGATGTaGGGGTCTACGATGGCCACC +
Preference number: 4 (lower is better)
Translates to: RGIWSPGSALSSCPNVGRESTLM*GSTMAT
Trigger: GGTGGCCATCGTAGACCCCCACATCAAGGTGGACTC...TCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp GAGATCACAAGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATCAGCGAAGAAGGCCCTaGCCAGGACAAAGGGGCGTT +
Preference number: 4 (lower is better)
Translates to: EITRGIWSPGSALSSCPNQRRRP*PGQRGV
Trigger: AACGCCCCTTTGTCCTGGCCAGGGCCTTCTTCGCTG...ATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCTTGTGATCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp ATGCTGGAAGGACAGGCGGCTTTCTGGAGATCCTTTTGTCTGGAGTACCACAGCCAGCGAAGAAGGCCCTaGCCAGGACAAAGGGGCGTT +
Preference number: 4 (lower is better)
Translates to: MLEGQAAFWRSFCLEYHSQRRRP*PGQRGV
Trigger: AACGCCCCTTTGTCCTGGCCAGGGCCTTCTTCGCTG...GCTGTGGTACTCCAGACAAAAGGATCTCCAGAAAGCCGCCTGTCCTTCCAGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532402.5
CDS-3UTR CCA 90 bp TCCAAGGCAGAAGAAAGAATATCTCTCAGCACTAATGCTCCCCTTCCCTCCCCCACGGCTCCAAAGCGCTaGGAGCCAGCGAAGAAGGCC +
Preference number: 4 (lower is better)
Translates to: SKAEERISLSTNAPLPSPTAPKR*EPAKKA
Trigger: GGCCTTCTTCGCTGGCTCCCAGCGCTTTGGAGCCGT...GGGGGAGGGAAGGGGAGCATTAGTGCTGAGAGATATTCTTTCTTCTGCCTTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp AGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGACGCCCAGTGTCCAAGTaGGCATGTGCCCGGAAGAAT +
Preference number: 4 (lower is better)
Translates to: RGIWSPGSALSSCPNVGRRPVSK*ACARKN
Trigger: ATTCTTCCGGGCACATGCCCACTTGGACACTGGGCG...TCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp AGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGACAGGGTCTGCTGAGCTaGAGACAAGGGTGTTGCCAG +
Preference number: 4 (lower is better)
Translates to: RGIWSPGSALSSCPNVGRQGLLS*RQGCCQ
Trigger: CTGGCAACACCCTTGTCTCCAGCTCAGCAGACCCTG...TCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
3UTR CAA 72 bp TGGTACCAGCGCACAAGCAGCTCTGGCTCTGGGTTTTaGAAGAAGCCACCCACATCCGCCCCACAGAAGGAA +
Preference number: 4 (lower is better)
Translates to: WYQRTSSSGSGF*KKPPTSAPQKE
Trigger: TTCCTTCTGTGGGGCGGATGTGGGTGGCTTCTTCAAAAACCCAGAGCCAGAGCTGCTTGTGCGCTGGTACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532402.5
CDS-3UTR TCA 90 bp CACCAAAACATCTGGTACACGGTATCGGGGTCGCCGAGGCTCCAGCTCATCAATGCCGTGCTGTCAAGATaGTCTTGTAGGGTCCCTCAG +
Preference number: 4 (lower is better)
Translates to: HQNIWYTVSGSPRLQLINAVLSR*SCRVPQ
Trigger: CTGAGGGACCCTACAAGATCATCTTGACAGCACGGC...ATTGATGAGCTGGAGCCTCGGCGACCCCGATACCGTGTACCAGATGTTTTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526210.1
ENST00000529737.5
ENST00000532402.5
ENST00000534613.5
CDS-3UTR TCA 90 bp AGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGAGCCGTGCTGTCAAGATaGTCTTGTAGGGTCCCTCAG +
Preference number: 4 (lower is better)
Translates to: RGIWSPGSALSSCPNVGRAVLSR*SCRVPQ
Trigger: CTGAGGGACCCTACAAGATCATCTTGACAGCACGGC...TCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR TCA 90 bp GTACCACAGCTGCTGGCTTTCCAGCCCCTATTATCACCACCCGCTCAATCCAGAACCCTAGGGGCCCTCTaGTGCTCAAACTCCAAGAGT +
Preference number: 4 (lower is better)
Translates to: VPQLLAFQPLLSPPAQSRTLGAL*CSNSKS
Trigger: ACTCTTGGAGTTTGAGCATCAGAGGGCCCCTAGGGT...TCTGGATTGAGCGGGTGGTGATAATAGGGGCTGGAAAGCCAGCAGCTGTGGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532402.5
CDS-3UTR TCA 90 bp AGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGAACCCTAGGGGCCCTCTaGTGCTCAAACTCCAAGAGT +
Preference number: 4 (lower is better)
Translates to: RGIWSPGSALSSCPNVGRTLGAL*CSNSKS
Trigger: ACTCTTGGAGTTTGAGCATCAGAGGGCCCCTAGGGT...TCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR TCA 90 bp GAGATCACAAGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATGACTGGGGTCCCAGGTaGAATACCGCTTGCCATCAG +
Preference number: 4 (lower is better)
Translates to: EITRGIWSPGSALSSCPNDWGPR*NTACHQ
Trigger: CTGATGGCAAGCGGTATTTCACCTGGGACCCCAGTC...ATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCTTGTGATCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR TCA 90 bp TCCAAGGCAGAAGAAAGAATATCTCTCAGCACTAATGCTCCCCTTCCCTCCCCCAGCCGGAGTCCACCTTaGTGTGGGGGTCTACGATGG +
Preference number: 4 (lower is better)
Translates to: SKAEERISLSTNAPLPSPSRSPP*CGGLRW
Trigger: CCATCGTAGACCCCCACATCAAGGTGGACTCCGGCT...GGGGGAGGGAAGGGGAGCATTAGTGCTGAGAGATATTCTTTCTTCTGCCTTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR TCA 90 bp CCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGAATCTGGGTCTTAGACCTGGCTCTGGGTTTTTaGAGAAGCCACCCACATCCG +
Preference number: 4 (lower is better)
Translates to: PGSALSSCPNVGRIWVLDLALGF*RSHPHP
Trigger: CGGATGTGGGTGGCTTCTTCAAAAACCCAGAGCCAG...GTCTAAGACCCAGATTCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR TCA 90 bp CTATTGGTGGATCAGCCACCAAAACATCTGGTACACGGTATCGGGGTCGCCGAGCCTTCCCGATGGGCCTaGTATAAGAGGGTGTACCAG +
Preference number: 4 (lower is better)
Translates to: LLVDQPPKHLVHGIGVAEPSRWA*YKRVYQ
Trigger: CTGGTACACCCTCTTATATCAGGCCCATCGGGAAGG...CTCGGCGACCCCGATACCGTGTACCAGATGTTTTGGTGGCTGATCCACCAATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532402.5
CDS-3UTR TCA 90 bp AGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGACCTTCCCGATGGGCCTaGTATAAGAGGGTGTACCAG +
Preference number: 4 (lower is better)
Translates to: RGIWSPGSALSSCPNVGRPSRWA*YKRVYQ
Trigger: CTGGTACACCCTCTTATATCAGGCCCATCGGGAAGG...TCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR TCA 90 bp CACCAAAACATCTGGTACACGGTATCGGGGTCGCCGAGGCTCCAGCTCATCAATGAGTCTGATACAGGGTaGACCAGCAACGCATCCCCA +
Preference number: 4 (lower is better)
Translates to: HQNIWYTVSGSPRLQLINESDTG*TSNASP
Trigger: TGGGGATGCGTTGCTGGTTCACCCTGTATCAGACTC...ATTGATGAGCTGGAGCCTCGGCGACCCCGATACCGTGTACCAGATGTTTTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532402.5
CDS-3UTR TCA 90 bp AGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGATCCTGGCTAACACGGTaGAACCCTGTCTCTACGCCT +
Preference number: 4 (lower is better)
Translates to: RGIWSPGSALSSCPNVGRSWLTR*NPVSTP
Trigger: AGGCGTAGAGACAGGGTTTCACCGTGTTAGCCAGGA...TCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648273.1
CDS-3UTR GCA 90 bp CCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGAATCTGGGTCTTAGACAGAGGCCTGGCCGTATaGTTCTCTGTCGCTTGCAGA +
Preference number: 4 (lower is better)
Translates to: PGSALSSCPNVGRIWVLDRGLAV*FSVACR
Trigger: TCTGCAAGCGACAGAGAAGCATACGGCCAGGCCTCT...GTCTAAGACCCAGATTCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000648273.1
CDS-3UTR GCA 90 bp AGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGAAGAGGCCTGGCCGTATaGTTCTCTGTCGCTTGCAGA +
Preference number: 4 (lower is better)
Translates to: RGIWSPGSALSSCPNVGRRGLAV*FSVACR
Trigger: TCTGCAAGCGACAGAGAAGCATACGGCCAGGCCTCT...TCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000648273.1
CDS-3UTR GCA 90 bp GAGATCACAAGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATGCGATGAGGGTTGTGTaGCAGGAGCACAGGCACAGA +
Preference number: 4 (lower is better)
Translates to: EITRGIWSPGSALSSCPNAMRVV*QEHRHR
Trigger: TCTGTGCCTGTGCTCCTGGCACACAACCCTCATCGC...ATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCTTGTGATCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR GCA 90 bp GCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATCAATGGAGTGGGAGAGCGCTCAAGCATGGTaGGGGGCTGAGGGAAGCGAC +
Preference number: 4 (lower is better)
Translates to: ATGCWGNEGKELVSMEWESAQAW*GAEGSD
Trigger: GTCGCTTCCCTCAGCCCCGCACCATGCTTGAGCGCT...CTCCCACTCCATTGATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR GCA 90 bp CCAAGGCAGAAGAAAGAATATCTCTCAGCACTAATGCTCCCCTTCCCTCCCCCTCAAAGGGGCGTTCCATaGCCCCAGAGCGCTGTCTCA +
Preference number: 4 (lower is better)
Translates to: PRQKKEYLSALMLPFPPPQRGVP*PQSAVS
Trigger: TGAGACAGCGCTCTGGGGGCATGGAACGCCCCTTTG...AGGGGGAGGGAAGGGGAGCATTAGTGCTGAGAGATATTCTTTCTTCTGCCTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR GCA 90 bp CCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGAATCTGGGTCTTAGACGTCCAAGTGGGCATGTaGCCGGAAGAATGGCTGGTA +
Preference number: 4 (lower is better)
Translates to: PGSALSSCPNVGRIWVLDVQVGM*PEEWLV
Trigger: TACCAGCCATTCTTCCGGGCACATGCCCACTTGGAC...GTCTAAGACCCAGATTCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR GCA 90 bp GAGATCACAAGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATGGGTCTTTTGATCCTTaGGAGACCCTAGGGGCCCTC +
Preference number: 4 (lower is better)
Translates to: EITRGIWSPGSALSSCPNGSFDP*ETLGAL
Trigger: GAGGGCCCCTAGGGTCTCGCAAGGATCAAAAGACCC...ATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCTTGTGATCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR GCA 90 bp CCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGAATCTGGGTCTTAGACACCGCCGCCATCTTGTaGAGAGTTTGCTCCTTGACC +
Preference number: 4 (lower is better)
Translates to: PGSALSSCPNVGRIWVLDTAAIL*RVCSLT
Trigger: GGTCAAGGAGCAAACTCTGCACAAGATGGCGGCGGT...GTCTAAGACCCAGATTCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540933.5
CDS-3UTR CCA 90 bp CTGCAGTCCCAACCCCTGTACTCACGAGACCCTAGGGGCCCTCTGATGCTCAAAAGAAAGCCGGGCTATTaGTGGATCAGCCACCAAAAC +
Preference number: 4 (lower is better)
Translates to: LQSQPLYSRDPRGPLMLKRKPGY*WISHQN
Trigger: GTTTTGGTGGCTGATCCACCAATAGCCCGGCTTTCT...TTTGAGCATCAGAGGGCCCCTAGGGTCTCGTGAGTACAGGGGTTGGGACTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000526210.1
CDS-3UTR CCA 90 bp GTGGATCAGCCACCAAAACATCTGGTACACGGTATCGGGGTCGCCGAGGCTCCAAGAAAGCCGGGCTATTaGTGGATCAGCCACCAAAAC +
Preference number: 4 (lower is better)
Translates to: VDQPPKHLVHGIGVAEAPRKPGY*WISHQN
Trigger: GTTTTGGTGGCTGATCCACCAATAGCCCGGCTTTCT...TGGAGCCTCGGCGACCCCGATACCGTGTACCAGATGTTTTGGTGGCTGATCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000526210.1
ENST00000529737.5
ENST00000532402.5
ENST00000534613.5
CDS-3UTR CCA 90 bp CCCCTGTACTCACGAGACCCTAGGGGCCCTCTGATGCTCAAACTCCAAGAGTCCAGGGTCCCTCAGCCATaGTTAACTCCACACTGTTCT +
Preference number: 4 (lower is better)
Translates to: PLYSRDPRGPLMLKLQESRVPQP*LTPHCS
Trigger: AGAACAGTGTGGAGTTAACCATGGCTGAGGGACCCT...GGACTCTTGGAGTTTGAGCATCAGAGGGCCCCTAGGGTCTCGTGAGTACAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526210.1
CDS-3UTR CCA 90 bp GTGGATCAGCCACCAAAACATCTGGTACACGGTATCGGGGTCGCCGAGGCTCCAAGGGTCCCTCAGCCATaGTTAACTCCACACTGTTCT +
Preference number: 4 (lower is better)
Translates to: VDQPPKHLVHGIGVAEAPRVPQP*LTPHCS
Trigger: AGAACAGTGTGGAGTTAACCATGGCTGAGGGACCCT...TGGAGCCTCGGCGACCCCGATACCGTGTACCAGATGTTTTGGTGGCTGATCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526210.1
ENST00000529737.5
ENST00000532402.5
ENST00000534613.5
CDS-3UTR CCA 90 bp TCCAAGGCAGAAGAAAGAATATCTCTCAGCACTAATGCTCCCCTTCCCTCCCCCGCTTGTCGCCATCCCTaGGTGTTTCCTCAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: SKAEERISLSTNAPLPSPACRHP*VFPQAG
Trigger: CCCAGCCTGAGGAAACACCCAGGGATGGCGACAAGC...GGGGGAGGGAAGGGGAGCATTAGTGCTGAGAGATATTCTTTCTTCTGCCTTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp CTATTGGTGGATCAGCCACCAAAACATCTGGTACACGGTATCGGGGTCGCCGAGCTCCTCCCAGGCTCCTaGCTCATCTTTCTCTGCCTT +
Preference number: 4 (lower is better)
Translates to: LLVDQPPKHLVHGIGVAELLPGS*LIFLCL
Trigger: AAGGCAGAGAAAGATGAGCCAGGAGCCTGGGAGGAG...CTCGGCGACCCCGATACCGTGTACCAGATGTTTTGGTGGCTGATCCACCAATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532402.5
ENST00000534613.5
CDS-3UTR CCA 90 bp CCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGAATCTGGGTCTTAGACCTCCTCCCAGGCTCCTaGCTCATCTTTCTCTGCCTT +
Preference number: 4 (lower is better)
Translates to: PGSALSSCPNVGRIWVLDLLPGS*LIFLCL
Trigger: AAGGCAGAGAAAGATGAGCCAGGAGCCTGGGAGGAG...GTCTAAGACCCAGATTCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp CCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGAATCTGGGTCTTAGACCCAAACCCACAGACATaGGGCCATACGGCTTGCTGT +
Preference number: 4 (lower is better)
Translates to: PGSALSSCPNVGRIWVLDPNPQT*GHTACC
Trigger: ACAGCAAGCCGTATGGCCCCATGTCTGTGGGTTTGG...GTCTAAGACCCAGATTCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp AGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGACCAAACCCACAGACATaGGGCCATACGGCTTGCTGT +
Preference number: 4 (lower is better)
Translates to: RGIWSPGSALSSCPNVGRPNPQT*GHTACC
Trigger: ACAGCAAGCCGTATGGCCCCATGTCTGTGGGTTTGG...TCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp TCCAAGGCAGAAGAAAGAATATCTCTCAGCACTAATGCTCCCCTTCCCTCCCCCGCGAACATCTGTCTGTaGGGTCTCCCCAGAGCCCTG +
Preference number: 4 (lower is better)
Translates to: SKAEERISLSTNAPLPSPANICL*GLPRAL
Trigger: CAGGGCTCTGGGGAGACCCCACAGACAGATGTTCGC...GGGGGAGGGAAGGGGAGCATTAGTGCTGAGAGATATTCTTTCTTCTGCCTTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp AGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGAGGAAAACATCAGAGATaGAGGGCCCCAGCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: RGIWSPGSALSSCPNVGRGKHQR*RAPAAG
Trigger: TCCTGCTGCTGGGGCCCTCCATCTCTGATGTTTTCC...TCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp GTATCGGGGTCGCCGAGGCTCCAGCTCATCAATCCTGAACCGAGTCATGTTCTTGGAAAACATCAGAGATaGAGGGCCCCAGCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: VSGSPRLQLINPEPSHVLGKHQR*RAPAAG
Trigger: TCCTGCTGCTGGGGCCCTCCATCTCTGATGTTTTCC...AAGAACATGACTCGGTTCAGGATTGATGAGCTGGAGCCTCGGCGACCCCGATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532402.5
CDS-3UTR CCA 90 bp CCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGAATCTGGGTCTTAGACGGAAAACATCAGAGATaGAGGGCCCCAGCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: PGSALSSCPNVGRIWVLDGKHQR*RAPAAG
Trigger: TCCTGCTGCTGGGGCCCTCCATCTCTGATGTTTTCC...GTCTAAGACCCAGATTCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp GTGCTCCAGTTAGAGCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATGCCGAGGGAGAAGAGTaGGGGCAACGCCTGGGTTCC +
Preference number: 4 (lower is better)
Translates to: VLQLEQQDVGGMKGKSWYAEGEE*GQRLGS
Trigger: GGAACCCAGGCGTTGCCCCCACTCTTCTCCCTCGGC...ATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGCTCTAACTGGAGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp CCAAGGCAGAAGAAAGAATATCTCTCAGCACTAATGCTCCCCTTCCCTCCCCCTTGTGGGGGTCTACGATaGCCACCAGCTTCCGCCTCT +
Preference number: 4 (lower is better)
Translates to: PRQKKEYLSALMLPFPPPCGGLR*PPASAS
Trigger: AGAGGCGGAAGCTGGTGGCCATCGTAGACCCCCACA...AGGGGGAGGGAAGGGGAGCATTAGTGCTGAGAGATATTCTTTCTTCTGCCTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp ATGCTGGAAGGACAGGCGGCTTTCTGGAGATCCTTTTGTCTGGAGTACCACAGCGAGTCCACCTTGATGTaGGGGTCTACGATGGCCACC +
Preference number: 4 (lower is better)
Translates to: MLEGQAAFWRSFCLEYHSESTLM*GSTMAT
Trigger: GGTGGCCATCGTAGACCCCCACATCAAGGTGGACTC...GCTGTGGTACTCCAGACAAAAGGATCTCCAGAAAGCCGCCTGTCCTTCCAGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532402.5
CDS-3UTR CCA 90 bp CTTCGGTCCTCTAGTAGGTCAAGGCGGAATGGCCGTGCTGTCAAGATGATCTTGCAGGGTCTGCTGAGCTaGAGACAAGGGTGTTGCCAG +
Preference number: 4 (lower is better)
Translates to: LRSSSRSRRNGRAVKMILQGLLS*RQGCCQ
Trigger: CTGGCAACACCCTTGTCTCCAGCTCAGCAGACCCTG...CAAGATCATCTTGACAGCACGGCCATTCCGCCTTGACCTACTAGAGGACCGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532402.5
CDS-3UTR CCA 90 bp CCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGAATCTGGGTCTTAGACGTCTCAGGGTCATGCTaGAAGGACAGGCGGCTTTCT +
Preference number: 4 (lower is better)
Translates to: PGSALSSCPNVGRIWVLDVSGSC*KDRRLS
Trigger: AGAAAGCCGCCTGTCCTTCCAGCATGACCCTGAGAC...GTCTAAGACCCAGATTCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp AGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGAGTCTCAGGGTCATGCTaGAAGGACAGGCGGCTTTCT +
Preference number: 4 (lower is better)
Translates to: RGIWSPGSALSSCPNVGRVSGSC*KDRRLS
Trigger: AGAAAGCCGCCTGTCCTTCCAGCATGACCCTGAGAC...TCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp ATTGGTGGATCAGCCACCAAAACATCTGGTACACGGTATCGGGGTCGCCGAGGCAGCATAAGTGAAGTCTaGGGAGGGCCGAACTCCAAG +
Preference number: 4 (lower is better)
Translates to: IGGSATKTSGTRYRGRRGSISEV*GGPNSK
Trigger: CTTGGAGTTCGGCCCTCCCCAGACTTCACTTATGCT...GCCTCGGCGACCCCGATACCGTGTACCAGATGTTTTGGTGGCTGATCCACCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532402.5
3UTR CAA 72 bp GTACAGGGTCTGGGGACCATGATGCTTCTGGTAGCTTaGAATGTCATACCACACCTCCCCTTGGCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: VQGLGTMMLLVA*NVIPHLPLARQ
Trigger: CTGCCTGGCCAAGGGGAGGTGTGGTATGACATTCAAAGCTACCAGAAGCATCATGGTCCCCAGACCCTGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532402.5
CDS-3UTR TCA 90 bp GAGATCACAAGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATGGATCAGATGGACCGTaGGGGAATCAGGACCAAGCT +
Preference number: 4 (lower is better)
Translates to: EITRGIWSPGSALSSCPNGSDGP*GNQDQA
Trigger: AGCTTGGTCCTGATTCCCTCACGGTCCATCTGATCC...ATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCTTGTGATCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000648273.1
CDS-3UTR TCA 90 bp CCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGAATCTGGGTCTTAGACCCAGCAACACCTTGGTaGCCTCATGGATCAGATGGA +
Preference number: 4 (lower is better)
Translates to: PGSALSSCPNVGRIWVLDPATPW*PHGSDG
Trigger: TCCATCTGATCCATGAGGTCACCAAGGTGTTGCTGG...GTCTAAGACCCAGATTCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000648273.1
CDS-3UTR TCA 90 bp CTTCGGTCCTCTAGTAGGTCAAGGCGGAATGGCCGTGCTGTCAAGATGATCTTGGCCGTGCTGTCAAGATaGTCTTGTAGGGTCCCTCAG +
Preference number: 4 (lower is better)
Translates to: LRSSSRSRRNGRAVKMILAVLSR*SCRVPQ
Trigger: CTGAGGGACCCTACAAGATCATCTTGACAGCACGGC...CAAGATCATCTTGACAGCACGGCCATTCCGCCTTGACCTACTAGAGGACCGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000526210.1
ENST00000529737.5
ENST00000532402.5
ENST00000534613.5
CDS-3UTR TCA 90 bp GAGATCACAAGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATGCCGTGCTGTCAAGATaGTCTTGTAGGGTCCCTCAG +
Preference number: 4 (lower is better)
Translates to: EITRGIWSPGSALSSCPNAVLSR*SCRVPQ
Trigger: CTGAGGGACCCTACAAGATCATCTTGACAGCACGGC...ATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCTTGTGATCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR TCA 90 bp AGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGAAGGTCTCTGCAGCATTaGGCCAGAAGATGCCCAAGT +
Preference number: 4 (lower is better)
Translates to: RGIWSPGSALSSCPNVGRRSLQH*ARRCPS
Trigger: ACTTGGGCATCTTCTGGCTCAATGCTGCAGAGACCT...TCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR TCA 90 bp GCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATCAATGGAGTGGGAGAGCCGGAGTCCACCTTaGTGTGGGGGTCTACGATGG +
Preference number: 4 (lower is better)
Translates to: ATGCWGNEGKELVSMEWESRSPP*CGGLRW
Trigger: CCATCGTAGACCCCCACATCAAGGTGGACTCCGGCT...CTCCCACTCCATTGATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR TCA 90 bp GAAAGCCGGGCTATTGGTGGATCAGCCACCAAAACATCTGGTACACGGTATCGGCTGGCTCTGGGTTTTTaGAGAAGCCACCCACATCCG +
Preference number: 4 (lower is better)
Translates to: ESRAIGGSATKTSGTRYRLALGF*RSHPHP
Trigger: CGGATGTGGGTGGCTTCTTCAAAAACCCAGAGCCAG...CCGATACCGTGTACCAGATGTTTTGGTGGCTGATCCACCAATAGCCCGGCTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532402.5
CDS-3UTR TCA 90 bp GTCTCCTCTGGCTTGTCGCCATCCCTGGGTGTTTCCTCAGGCTGGGCCCCATCGTCCCCAAGCAAGTACTaGTCATCTATATTGAAGGTA +
Preference number: 4 (lower is better)
Translates to: VSSGLSPSLGVSSGWAPSSPSKY*SSILKV
Trigger: TACCTTCAATATAGATGATCAGTACTTGCTTGGGGA...CGATGGGGCCCAGCCTGAGGAAACACCCAGGGATGGCGACAAGCCAGAGGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532402.5
CDS-3UTR TCA 90 bp GAGATCACAAGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATGAGTCTGATACAGGGTaGACCAGCAACGCATCCCCA +
Preference number: 4 (lower is better)
Translates to: EITRGIWSPGSALSSCPNESDTG*TSNASP
Trigger: TGGGGATGCGTTGCTGGTTCACCCTGTATCAGACTC...ATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCTTGTGATCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR TCA 90 bp GAGGTCTCAGGGTCATGCTGGAAGGACAGGCGGCTTTCTGGAGATCCTTTTGTCATGGGCTCCAGAGTCTaGTACAGGGTGAACCAGCAA +
Preference number: 4 (lower is better)
Translates to: EVSGSCWKDRRLSGDPFVMGSRV*YRVNQQ
Trigger: TTGCTGGTTCACCCTGTATCAGACTCTGGAGCCCAT...GACAAAAGGATCTCCAGAAAGCCGCCTGTCCTTCCAGCATGACCCTGAGACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532402.5
CDS-3UTR TCA 90 bp CCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGAATCTGGGTCTTAGACATGGGCTCCAGAGTCTaGTACAGGGTGAACCAGCAA +
Preference number: 4 (lower is better)
Translates to: PGSALSSCPNVGRIWVLDMGSRV*YRVNQQ
Trigger: TTGCTGGTTCACCCTGTATCAGACTCTGGAGCCCAT...GTCTAAGACCCAGATTCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR TCA 90 bp CCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGAATCTGGGTCTTAGACGGCGAGTCTGATAGTTaGACGTGTGCCCATCATCCA +
Preference number: 4 (lower is better)
Translates to: PGSALSSCPNVGRIWVLDGESDS*TCAHHP
Trigger: TGGATGATGGGCACACGTTCAACTATCAGACTCGCC...GTCTAAGACCCAGATTCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR TCA 90 bp GCTATTGGTGGATCAGCCACCAAAACATCTGGTACACGGTATCGGGGTCGCCGAGGTGTTGCCAGAGAATaGGAATCGACGCAGCAGGAA +
Preference number: 4 (lower is better)
Translates to: AIGGSATKTSGTRYRGRRGVARE*ESTQQE
Trigger: TTCCTGCTGCGTCGATTCTCATTCTCTGGCAACACC...TCGGCGACCCCGATACCGTGTACCAGATGTTTTGGTGGCTGATCCACCAATAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532402.5
CDS-3UTR TCA 90 bp AGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGAAATCAGATGCCACATTaGTGCCAGGCTTGCGCAGGA +
Preference number: 4 (lower is better)
Translates to: RGIWSPGSALSSCPNVGRNQMPH*CQACAG
Trigger: TCCTGCGCAAGCCTGGCATCAATGTGGCATCTGATT...TCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR TCA 90 bp GCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATCAATGGAGTGGGAGCCCCTTCCGGCCTTATaGTTGGTTCGACCTGAGCGC +
Preference number: 4 (lower is better)
Translates to: ATGCWGNEGKELVSMEWEPLPAL*LVRPER
Trigger: GCGCTCAGGTCGAACCAATCATAAGGCCGGAAGGGG...CTCCCACTCCATTGATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540933.5
CDS-3UTR GCA 90 bp AGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGATGGCTCATCTTTCTCTaGCTTCCCCTGAGTCTCCTC +
Preference number: 4 (lower is better)
Translates to: RGIWSPGSALSSCPNVGRWLIFL*LPLSLL
Trigger: GAGGAGACTCAGGGGAAGGCAGAGAAAGATGAGCCA...TCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR GCA 90 bp CCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGAATCTGGGTCTTAGACTGGCTCATCTTTCTCTaGCTTCCCCTGAGTCTCCTC +
Preference number: 4 (lower is better)
Translates to: PGSALSSCPNVGRIWVLDWLIFL*LPLSLL
Trigger: GAGGAGACTCAGGGGAAGGCAGAGAAAGATGAGCCA...GTCTAAGACCCAGATTCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR GCA 90 bp GTCTACGATGGCCACCAGCTTCCGCCTCTTAGAAGCCAAGCGCTCAAGCATGGTCATAGACATGCTCCATaGCTGGCAGAGAGAAGTCCA +
Preference number: 4 (lower is better)
Translates to: VYDGHQLPPLRSQALKHGHRHAP*LAERSP
Trigger: TGGACTTCTCTCTGCCAGGCATGGAGCATGTCTATG...ACCATGCTTGAGCGCTTGGCTTCTAAGAGGCGGAAGCTGGTGGCCATCGTAGAC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532402.5
CDS-3UTR GCA 90 bp AGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGACAGCCTCAGGTTGTCTaGATGCTCAGGGATCCCATA +
Preference number: 4 (lower is better)
Translates to: RGIWSPGSALSSCPNVGRQPQVV*MLRDPI
Trigger: TATGGGATCCCTGAGCATGCAGACAACCTGAGGCTG...TCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR GCA 90 bp TCCAAGGCAGAAGAAAGAATATCTCTCAGCACTAATGCTCCCCTTCCCTCCCCCGCGATGAGGGTTGTGTaGCAGGAGCACAGGCACAGA +
Preference number: 4 (lower is better)
Translates to: SKAEERISLSTNAPLPSPAMRVV*QEHRHR
Trigger: TCTGTGCCTGTGCTCCTGGCACACAACCCTCATCGC...GGGGGAGGGAAGGGGAGCATTAGTGCTGAGAGATATTCTTTCTTCTGCCTTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR GCA 90 bp CAGAAAGCCGGGCTATTGGTGGATCAGCCACCAAAACATCTGGTACACGGTATCGCGATGAGGGTTGTGTaGCAGGAGCACAGGCACAGA +
Preference number: 4 (lower is better)
Translates to: QKAGLLVDQPPKHLVHGIAMRVV*QEHRHR
Trigger: TCTGTGCCTGTGCTCCTGGCACACAACCCTCATCGC...GATACCGTGTACCAGATGTTTTGGTGGCTGATCCACCAATAGCCCGGCTTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532402.5
CDS-3UTR GCA 90 bp CCAAGGCAGAAGAAAGAATATCTCTCAGCACTAATGCTCCCCTTCCCTCCCCCTGCGATGAGGGTTGTGTaGCAGGAGCACAGGCACAGA +
Preference number: 4 (lower is better)
Translates to: PRQKKEYLSALMLPFPPPAMRVV*QEHRHR
Trigger: TCTGTGCCTGTGCTCCTGGCACACAACCCTCATCGC...AGGGGGAGGGAAGGGGAGCATTAGTGCTGAGAGATATTCTTTCTTCTGCCTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR GCA 90 bp GCCACCAAAACATCTGGTACACGGTATCGGGGTCGCCGAGGCTCCAGCTCATCAATCAACCCAGGTCTCTaGAGCATTGAGCCAGAAGAT +
Preference number: 4 (lower is better)
Translates to: ATKTSGTRYRGRRGSSSSINPGL*SIEPED
Trigger: ATCTTCTGGCTCAATGCTGCAGAGACCTGGGTTGAT...TGATGAGCTGGAGCCTCGGCGACCCCGATACCGTGTACCAGATGTTTTGGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532402.5
CDS-3UTR GCA 90 bp GAGATCACAAGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATGTCCAAGTGGGCATGTaGCCGGAAGAATGGCTGGTA +
Preference number: 4 (lower is better)
Translates to: EITRGIWSPGSALSSCPNVQVGM*PEEWLV
Trigger: TACCAGCCATTCTTCCGGGCACATGCCCACTTGGAC...ATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCTTGTGATCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR GCA 90 bp CCAAGGCAGAAGAAAGAATATCTCTCAGCACTAATGCTCCCCTTCCCTCCCCCTGAGGTCTCAGGGTCATaGTGGAAGGACAGGCGGCTT +
Preference number: 4 (lower is better)
Translates to: PRQKKEYLSALMLPFPPPEVSGS*WKDRRL
Trigger: AAGCCGCCTGTCCTTCCAGCATGACCCTGAGACCTC...AGGGGGAGGGAAGGGGAGCATTAGTGCTGAGAGATATTCTTTCTTCTGCCTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR GCA 90 bp CAGAAAGCCGGGCTATTGGTGGATCAGCCACCAAAACATCTGGTACACGGTATCGGGTCTTTTGATCCTTaGGAGACCCTAGGGGCCCTC +
Preference number: 4 (lower is better)
Translates to: QKAGLLVDQPPKHLVHGIGSFDP*ETLGAL
Trigger: GAGGGCCCCTAGGGTCTCGCAAGGATCAAAAGACCC...GATACCGTGTACCAGATGTTTTGGTGGCTGATCCACCAATAGCCCGGCTTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532402.5
CDS-3UTR GCA 90 bp GCTATTGGTGGATCAGCCACCAAAACATCTGGTACACGGTATCGGGGTCGCCGAAGAGGCCTGGCCGTATaGTTCTCTGTCGCAGAAAGA +
Preference number: 4 (lower is better)
Translates to: AIGGSATKTSGTRYRGRRRGLAV*FSVAER
Trigger: TCTTTCTGCGACAGAGAAGCATACGGCCAGGCCTCT...TCGGCGACCCCGATACCGTGTACCAGATGTTTTGGTGGCTGATCCACCAATAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529737.5
CDS-3UTR CCA 90 bp GAGATCACAAGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATGTATGGAGAGAGGCCTaGCCGTATGCTTCTCTGTCG +
Preference number: 4 (lower is better)
Translates to: EITRGIWSPGSALSSCPNVWREA*PYASLS
Trigger: CGACAGAGAAGCATACGGCCAGGCCTCTCTCCATAC...ATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCTTGTGATCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000648273.1
CDS-3UTR CCA 90 bp AGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGAACCTTGGTGACCTCATaGATCAGATGGACCGTGAGG +
Preference number: 4 (lower is better)
Translates to: RGIWSPGSALSSCPNVGRTLVTS*IRWTVR
Trigger: CCTCACGGTCCATCTGATCCATGAGGTCACCAAGGT...TCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000648273.1
CDS-3UTR CCA 90 bp CCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGAATCTGGGTCTTAGACACCTTGGTGACCTCATaGATCAGATGGACCGTGAGG +
Preference number: 4 (lower is better)
Translates to: PGSALSSCPNVGRIWVLDTLVTS*IRWTVR
Trigger: CCTCACGGTCCATCTGATCCATGAGGTCACCAAGGT...GTCTAAGACCCAGATTCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000648273.1
CDS-3UTR CCA 90 bp CCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGAATCTGGGTCTTAGACAGCCACCAAAACATCTaGTACACGGTATCGGGGTCG +
Preference number: 4 (lower is better)
Translates to: PGSALSSCPNVGRIWVLDSHQNI*YTVSGS
Trigger: CGACCCCGATACCGTGTACCAGATGTTTTGGTGGCT...GTCTAAGACCCAGATTCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp ATTGGTGGATCAGCCACCAAAACATCTGGTACACGGTATCGGGGTCGCCGAGGCAGGGTCCCTCAGCCATaGTTAACTCCACACTGTTCT +
Preference number: 4 (lower is better)
Translates to: IGGSATKTSGTRYRGRRGRVPQP*LTPHCS
Trigger: AGAACAGTGTGGAGTTAACCATGGCTGAGGGACCCT...GCCTCGGCGACCCCGATACCGTGTACCAGATGTTTTGGTGGCTGATCCACCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526210.1
ENST00000529737.5
ENST00000532402.5
ENST00000534613.5
CDS-3UTR CCA 90 bp GACCCTAGGGGCCCTCTGATGCTCAAACTCCAAGAGTCCTCGGGCATTGACACTAGGGTCCCTCAGCCATaGTTAACTCCACACTGTTCT +
Preference number: 4 (lower is better)
Translates to: DPRGPLMLKLQESSGIDTRVPQP*LTPHCS
Trigger: AGAACAGTGTGGAGTTAACCATGGCTGAGGGACCCT...AGTGTCAATGCCCGAGGACTCTTGGAGTTTGAGCATCAGAGGGCCCCTAGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526210.1
ENST00000532402.5
ENST00000534613.5
CDS-3UTR CCA 90 bp GCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATCAATGGAGTGGGAGGCTTGTCGCCATCCCTaGGTGTTTCCTCAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: ATGCWGNEGKELVSMEWEACRHP*VFPQAG
Trigger: CCCAGCCTGAGGAAACACCCAGGGATGGCGACAAGC...CTCCCACTCCATTGATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp GTGCTCCAGTTAGAGCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATCCCCTGAGTCTCCTCTaGCTTGTCGCCATCCCTGGG +
Preference number: 4 (lower is better)
Translates to: VLQLEQQDVGGMKGKSWYPLSLL*LVAIPG
Trigger: CCCAGGGATGGCGACAAGCCAGAGGAGACTCAGGGG...ATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGCTCTAACTGGAGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp AGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGAGACATGCTCCATGCCTaGCAGAGAGAAGTCCAAACC +
Preference number: 4 (lower is better)
Translates to: RGIWSPGSALSSCPNVGRDMLHA*QREVQT
Trigger: GGTTTGGACTTCTCTCTGCCAGGCATGGAGCATGTC...TCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp AGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGAATTGTAGAGGCGATATaGCTCCCCACCCTCAGTGAC +
Preference number: 4 (lower is better)
Translates to: RGIWSPGSALSSCPNVGRIVEAI*LPTLSD
Trigger: GTCACTGAGGGTGGGGAGCCATATCGCCTCTACAAT...TCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp GTATCGGGGTCGCCGAGGCTCCAGCTCATCAATCCTGAACCGAGTCATGTTCTTATTGTAGAGGCGATATaGCTCCCCACCCTCAGTGAC +
Preference number: 4 (lower is better)
Translates to: VSGSPRLQLINPEPSHVLIVEAI*LPTLSD
Trigger: GTCACTGAGGGTGGGGAGCCATATCGCCTCTACAAT...AAGAACATGACTCGGTTCAGGATTGATGAGCTGGAGCCTCGGCGACCCCGATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532402.5
CDS-3UTR CCA 90 bp CCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGAATCTGGGTCTTAGACATTGTAGAGGCGATATaGCTCCCCACCCTCAGTGAC +
Preference number: 4 (lower is better)
Translates to: PGSALSSCPNVGRIWVLDIVEAI*LPTLSD
Trigger: GTCACTGAGGGTGGGGAGCCATATCGCCTCTACAAT...GTCTAAGACCCAGATTCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp CCAAGGCAGAAGAAAGAATATCTCTCAGCACTAATGCTCCCCTTCCCTCCCCCTAGTGGGGGCAACGCCTaGGTTCCTGTGAGACTAGCA +
Preference number: 4 (lower is better)
Translates to: PRQKKEYLSALMLPFPPPSGGNA*VPVRLA
Trigger: TGCTAGTCTCACAGGAACCCAGGCGTTGCCCCCACT...AGGGGGAGGGAAGGGGAGCATTAGTGCTGAGAGATATTCTTTCTTCTGCCTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp CCAAGGCAGAAGAAAGAATATCTCTCAGCACTAATGCTCCCCTTCCCTCCCCCTGAGTCCACCTTGATGTaGGGGTCTACGATGGCCACC +
Preference number: 4 (lower is better)
Translates to: PRQKKEYLSALMLPFPPPESTLM*GSTMAT
Trigger: GGTGGCCATCGTAGACCCCCACATCAAGGTGGACTC...AGGGGGAGGGAAGGGGAGCATTAGTGCTGAGAGATATTCTTTCTTCTGCCTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp CCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGAATCTGGGTCTTAGACATGTGCCCGGAAGAATaGCTGGTAAGCACCCATCTG +
Preference number: 4 (lower is better)
Translates to: PGSALSSCPNVGRIWVLDMCPEE*LVSTHL
Trigger: CAGATGGGTGCTTACCAGCCATTCTTCCGGGCACAT...GTCTAAGACCCAGATTCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp CCAAGGCAGAAGAAAGAATATCTCTCAGCACTAATGCTCCCCTTCCCTCCCCCTCGCCCAGTGTCCAAGTaGGCATGTGCCCGGAAGAAT +
Preference number: 4 (lower is better)
Translates to: PRQKKEYLSALMLPFPPPRPVSK*ACARKN
Trigger: ATTCTTCCGGGCACATGCCCACTTGGACACTGGGCG...AGGGGGAGGGAAGGGGAGCATTAGTGCTGAGAGATATTCTTTCTTCTGCCTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp ATATTGCCGGAAAACATCAGAGATGGAGGGCCCCAGCAGCAGGAAGACGTCAATCGCCCAGTGTCCAAGTaGGCATGTGCCCGGAAGAAT +
Preference number: 4 (lower is better)
Translates to: ILPENIRDGGPQQQEDVNRPVSK*ACARKN
Trigger: ATTCTTCCGGGCACATGCCCACTTGGACACTGGGCG...ATTGACGTCTTCCTGCTGCTGGGGCCCTCCATCTCTGATGTTTTCCGGCAATAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532402.5
CDS-3UTR CCA 90 bp CCAAGGCAGAAGAAAGAATATCTCTCAGCACTAATGCTCCCCTTCCCTCCCCCTCAGGGTCTGCTGAGCTaGAGACAAGGGTGTTGCCAG +
Preference number: 4 (lower is better)
Translates to: PRQKKEYLSALMLPFPPPQGLLS*RQGCCQ
Trigger: CTGGCAACACCCTTGTCTCCAGCTCAGCAGACCCTG...AGGGGGAGGGAAGGGGAGCATTAGTGCTGAGAGATATTCTTTCTTCTGCCTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp CCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGAATCTGGGTCTTAGACGGAGATCCTTTTGTCTaGAGTACCACAGCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: PGSALSSCPNVGRIWVLDGDPFV*STTAAG
Trigger: GCCAGCAGCTGTGGTACTCCAGACAAAAGGATCTCC...GTCTAAGACCCAGATTCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp TATTGGTGGATCAGCCACCAAAACATCTGGTACACGGTATCGGGGTCGCCGAGGGGACAGGCGGCTTTCTaGAGATCCTTTTGTCTGGAG +
Preference number: 4 (lower is better)
Translates to: YWWISHQNIWYTVSGSPRGQAAF*RSFCLE
Trigger: CTCCAGACAAAAGGATCTCCAGAAAGCCGCCTGTCC...CCTCGGCGACCCCGATACCGTGTACCAGATGTTTTGGTGGCTGATCCACCAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000532402.5
CDS-3UTR CCA 90 bp GAGATCACAAGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATGTCTCAGGGTCATGCTaGAAGGACAGGCGGCTTTCT +
Preference number: 4 (lower is better)
Translates to: EITRGIWSPGSALSSCPNVSGSC*KDRRLS
Trigger: AGAAAGCCGCCTGTCCTTCCAGCATGACCCTGAGAC...ATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCTTGTGATCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp AGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGAAGCATAAGTGAAGTCTaGGGAGGGCCGAACTCCAAG +
Preference number: 4 (lower is better)
Translates to: RGIWSPGSALSSCPNVGRSISEV*GGPNSK
Trigger: CTTGGAGTTCGGCCCTCCCCAGACTTCACTTATGCT...TCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp CCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGAATCTGGGTCTTAGACAGCATAAGTGAAGTCTaGGGAGGGCCGAACTCCAAG +
Preference number: 4 (lower is better)
Translates to: PGSALSSCPNVGRIWVLDSISEV*GGPNSK
Trigger: CTTGGAGTTCGGCCCTCCCCAGACTTCACTTATGCT...GTCTAAGACCCAGATTCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp AGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGAATCACAAGAGGAATTTaGAGCCCAGGGTCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: RGIWSPGSALSSCPNVGRITRGI*SPGSAL
Trigger: GAGGGCTGACCCTGGGCTCCAAATTCCTCTTGTGAT...TCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp TCCAAGGCAGAAGAAAGAATATCTCTCAGCACTAATGCTCCCCTTCCCTCCCCCTTCCGGCCTTATGATTaGTTCGACCTGAGCGCCGCC +
Preference number: 4 (lower is better)
Translates to: SKAEERISLSTNAPLPSPFRPYD*FDLSAA
Trigger: GGCGGCGCTCAGGTCGAACCAATCATAAGGCCGGAA...GGGGGAGGGAAGGGGAGCATTAGTGCTGAGAGATATTCTTTCTTCTGCCTTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540933.5
CDS-3UTR TCA 90 bp TCCAAGGCAGAAGAAAGAATATCTCTCAGCACTAATGCTCCCCTTCCCTCCCCCGGATCAGATGGACCGTaGGGGAATCAGGACCAAGCT +
Preference number: 4 (lower is better)
Translates to: SKAEERISLSTNAPLPSPGSDGP*GNQDQA
Trigger: AGCTTGGTCCTGATTCCCTCACGGTCCATCTGATCC...GGGGGAGGGAAGGGGAGCATTAGTGCTGAGAGATATTCTTTCTTCTGCCTTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000648273.1
CDS-3UTR TCA 90 bp CCAAGGCAGAAGAAAGAATATCTCTCAGCACTAATGCTCCCCTTCCCTCCCCCTGGATCAGATGGACCGTaGGGGAATCAGGACCAAGCT +
Preference number: 4 (lower is better)
Translates to: PRQKKEYLSALMLPFPPPGSDGP*GNQDQA
Trigger: AGCTTGGTCCTGATTCCCTCACGGTCCATCTGATCC...AGGGGGAGGGAAGGGGAGCATTAGTGCTGAGAGATATTCTTTCTTCTGCCTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000648273.1
CDS-3UTR TCA 90 bp CCAGAGACAGAAAGCCGGGCTATTGGTGGATCAGCCACCAAAACATCTGGTACAGCCGTGCTGTCAAGATaGTCTTGTAGGGTCCCTCAG +
Preference number: 4 (lower is better)
Translates to: PETESRAIGGSATKTSGTAVLSR*SCRVPQ
Trigger: CTGAGGGACCCTACAAGATCATCTTGACAGCACGGC...TGTACCAGATGTTTTGGTGGCTGATCCACCAATAGCCCGGCTTTCTGTCTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000526210.1
ENST00000529737.5
ENST00000532402.5
ENST00000534613.5
CDS-3UTR TCA 90 bp CCAAGGCAGAAGAAAGAATATCTCTCAGCACTAATGCTCCCCTTCCCTCCCCCTACCCTAGGGGCCCTCTaGTGCTCAAACTCCAAGAGT +
Preference number: 4 (lower is better)
Translates to: PRQKKEYLSALMLPFPPPTLGAL*CSNSKS
Trigger: ACTCTTGGAGTTTGAGCATCAGAGGGCCCCTAGGGT...AGGGGGAGGGAAGGGGAGCATTAGTGCTGAGAGATATTCTTTCTTCTGCCTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR TCA 90 bp CAGAAAGCCGGGCTATTGGTGGATCAGCCACCAAAACATCTGGTACACGGTATCACCCTAGGGGCCCTCTaGTGCTCAAACTCCAAGAGT +
Preference number: 4 (lower is better)
Translates to: QKAGLLVDQPPKHLVHGITLGAL*CSNSKS
Trigger: ACTCTTGGAGTTTGAGCATCAGAGGGCCCCTAGGGT...GATACCGTGTACCAGATGTTTTGGTGGCTGATCCACCAATAGCCCGGCTTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526210.1
ENST00000529737.5
ENST00000532402.5
ENST00000534613.5
CDS-3UTR TCA 90 bp AGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGATGTCAGAGTGAGTTTTaGATGTCTCCTCCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: RGIWSPGSALSSCPNVGRCQSEF*MSPPRL
Trigger: GAGCCTGGGAGGAGACATTCAAAACTCACTCTGACA...TCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR TCA 90 bp GAGGTCTCAGGGTCATGCTGGAAGGACAGGCGGCTTTCTGGAGATCCTTTTGTCTGTCAGAGTGAGTTTTaGATGTCTCCTCCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: EVSGSCWKDRRLSGDPFVCQSEF*MSPPRL
Trigger: GAGCCTGGGAGGAGACATTCAAAACTCACTCTGACA...GACAAAAGGATCTCCAGAAAGCCGCCTGTCCTTCCAGCATGACCCTGAGACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532402.5
CDS-3UTR TCA 90 bp GTCAAGGCGGAATGGCCGTGCTGTCAAGATGATCTTGTAGGGTCCCTCAGCCATGGCTTGCTGTCAGAGTaGGTTTTGAATGTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: VKAEWPCCQDDLVGSLSHGLLSE*VLNVSS
Trigger: GGAGGAGACATTCAAAACTCACTCTGACAGCAAGCC...ATGGCTGAGGGACCCTACAAGATCATCTTGACAGCACGGCCATTCCGCCTTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532402.5
ENST00000534613.5
CDS-3UTR TCA 90 bp GTGCTCCAGTTAGAGCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATATGCCCAAGTCGCGATaGGGGTTGTGTGCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: VLQLEQQDVGGMKGKSWYMPKSR*GLCARS
Trigger: GCTCCTGGCACACAACCCTCATCGCGACTTGGGCAT...ATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGCTCTAACTGGAGCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR TCA 90 bp GAGATCACAAGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATAGGTCTCTGCAGCATTaGGCCAGAAGATGCCCAAGT +
Preference number: 4 (lower is better)
Translates to: EITRGIWSPGSALSSCPNRSLQH*ARRCPS
Trigger: ACTTGGGCATCTTCTGGCTCAATGCTGCAGAGACCT...ATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCTTGTGATCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR TCA 90 bp CCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGAATCTGGGTCTTAGACCAATGTCTAGCCAGATaGCATCACAGGGCAGGTTGT +
Preference number: 4 (lower is better)
Translates to: PGSALSSCPNVGRIWVLDQCLAR*HHRAGC
Trigger: ACAACCTGCCCTGTGATGTCATCTGGCTAGACATTG...GTCTAAGACCCAGATTCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR TCA 90 bp AAGCCGGGCTATTGGTGGATCAGCCACCAAAACATCTGGTACACGGTATCGGGGCAATGTCTAGCCAGATaGCATCACAGGGCAGGTTGT +
Preference number: 4 (lower is better)
Translates to: KPGYWWISHQNIWYTVSGQCLAR*HHRAGC
Trigger: ACAACCTGCCCTGTGATGTCATCTGGCTAGACATTG...CCCCGATACCGTGTACCAGATGTTTTGGTGGCTGATCCACCAATAGCCCGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532402.5
CDS-3UTR TCA 90 bp GCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATCAATGGAGTGGGAGGACTGGGGTCCCAGGTaGAATACCGCTTGCCATCAG +
Preference number: 4 (lower is better)
Translates to: ATGCWGNEGKELVSMEWEDWGPR*NTACHQ
Trigger: CTGATGGCAAGCGGTATTTCACCTGGGACCCCAGTC...CTCCCACTCCATTGATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR TCA 90 bp GTGCTCCAGTTAGAGCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATAGCCGGAGTCCACCTTaGTGTGGGGGTCTACGATGG +
Preference number: 4 (lower is better)
Translates to: VLQLEQQDVGGMKGKSWYSRSPP*CGGLRW
Trigger: CCATCGTAGACCCCCACATCAAGGTGGACTCCGGCT...ATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGCTCTAACTGGAGCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR TCA 90 bp TCCAAGGCAGAAGAAAGAATATCTCTCAGCACTAATGCTCCCCTTCCCTCCCCCCTGGCTCTGGGTTTTTaGAGAAGCCACCCACATCCG +
Preference number: 4 (lower is better)
Translates to: SKAEERISLSTNAPLPSPLALGF*RSHPHP
Trigger: CGGATGTGGGTGGCTTCTTCAAAAACCCAGAGCCAG...GGGGGAGGGAAGGGGAGCATTAGTGCTGAGAGATATTCTTTCTTCTGCCTTGGA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR TCA 90 bp TCCAAGGCAGAAGAAAGAATATCTCTCAGCACTAATGCTCCCCTTCCCTCCCCCAAGGTAGTCACATCCTaGGGGTACTGCACCCACAGG +
Preference number: 4 (lower is better)
Translates to: SKAEERISLSTNAPLPSPKVVTS*GYCTHR
Trigger: CCTGTGGGTGCAGTACCCTCAGGATGTGACTACCTT...GGGGGAGGGAAGGGGAGCATTAGTGCTGAGAGATATTCTTTCTTCTGCCTTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR TCA 90 bp CCAAGGCAGAAGAAAGAATATCTCTCAGCACTAATGCTCCCCTTCCCTCCCCCTGAGTCTGATACAGGGTaGACCAGCAACGCATCCCCA +
Preference number: 4 (lower is better)
Translates to: PRQKKEYLSALMLPFPPPESDTG*TSNASP
Trigger: TGGGGATGCGTTGCTGGTTCACCCTGTATCAGACTC...AGGGGGAGGGAAGGGGAGCATTAGTGCTGAGAGATATTCTTTCTTCTGCCTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR TCA 90 bp GAGATCACAAGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATATGGGCTCCAGAGTCTaGTACAGGGTGAACCAGCAA +
Preference number: 4 (lower is better)
Translates to: EITRGIWSPGSALSSCPNMGSRV*YRVNQQ
Trigger: TTGCTGGTTCACCCTGTATCAGACTCTGGAGCCCAT...ATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCTTGTGATCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR TCA 90 bp AGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGAATCCTTCATACATTCTaGAGACCGCCGCACTCGCAT +
Preference number: 4 (lower is better)
Translates to: RGIWSPGSALSSCPNVGRILHTF*RPPHSH
Trigger: ATGCGAGTGCGGCGGTCTTCAGAATGTATGAAGGAT...TCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR TCA 90 bp AAGCCGGGCTATTGGTGGATCAGCCACCAAAACATCTGGTACACGGTATCGGGGATCCTTCATACATTCTaGAGACCGCCGCACTCGCAT +
Preference number: 4 (lower is better)
Translates to: KPGYWWISHQNIWYTVSGILHTF*RPPHSH
Trigger: ATGCGAGTGCGGCGGTCTTCAGAATGTATGAAGGAT...CCCCGATACCGTGTACCAGATGTTTTGGTGGCTGATCCACCAATAGCCCGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532402.5
CDS-3UTR TCA 90 bp CCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGAATCTGGGTCTTAGACATCCTTCATACATTCTaGAGACCGCCGCACTCGCAT +
Preference number: 4 (lower is better)
Translates to: PGSALSSCPNVGRIWVLDILHTF*RPPHSH
Trigger: ATGCGAGTGCGGCGGTCTTCAGAATGTATGAAGGAT...GTCTAAGACCCAGATTCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR TCA 90 bp GAGATCACAAGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATGGCGAGTCTGATAGTTaGACGTGTGCCCATCATCCA +
Preference number: 4 (lower is better)
Translates to: EITRGIWSPGSALSSCPNGESDS*TCAHHP
Trigger: TGGATGATGGGCACACGTTCAACTATCAGACTCGCC...ATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCTTGTGATCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR TCA 90 bp GAGATCACAAGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATGGTGTTGCCAGAGAATaGGAATCGACGCAGCAGGAA +
Preference number: 4 (lower is better)
Translates to: EITRGIWSPGSALSSCPNGVARE*ESTQQE
Trigger: TTCCTGCTGCGTCGATTCTCATTCTCTGGCAACACC...ATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCTTGTGATCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR TCA 90 bp CACAGACATGGGGCCATACGGCTTGCTGTCAGAGTGAGTTTTGAATGTCTCCTCTCCTTCAGGGTCTGCTaGGCTGGAGACAAGGGTGTT +
Preference number: 4 (lower is better)
Translates to: HRHGAIRLAVRVSFECLLSFRVC*AGDKGV
Trigger: AACACCCTTGTCTCCAGCTCAGCAGACCCTGAAGGA...GAGGAGACATTCAAAACTCACTCTGACAGCAAGCCGTATGGCCCCATGTCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532402.5
CDS-3UTR TCA 90 bp CCAAGGCAGAAGAAAGAATATCTCTCAGCACTAATGCTCCCCTTCCCTCCCCCTTCCTTCAGGGTCTGCTaGGCTGGAGACAAGGGTGTT +
Preference number: 4 (lower is better)
Translates to: PRQKKEYLSALMLPFPPPSFRVC*AGDKGV
Trigger: AACACCCTTGTCTCCAGCTCAGCAGACCCTGAAGGA...AGGGGGAGGGAAGGGGAGCATTAGTGCTGAGAGATATTCTTTCTTCTGCCTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR TCA 90 bp GAGATCACAAGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATAATCAGATGCCACATTaGTGCCAGGCTTGCGCAGGA +
Preference number: 4 (lower is better)
Translates to: EITRGIWSPGSALSSCPNNQMPH*CQACAG
Trigger: TCCTGCGCAAGCCTGGCATCAATGTGGCATCTGATT...ATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCTTGTGATCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR TCA 90 bp CTGAGTCTCCTCTGGCTTGTCGCCATCCCTGGGTGTTTCCTCAGGCTGGGCCCCTTATTGTTTCTCCTTTaGTCAAAACGTGTCACAGCT +
Preference number: 4 (lower is better)
Translates to: LSLLWLVAIPGCFLRLGPLLFLL*SKRVTA
Trigger: AGCTGTGACACGTTTTGATCAAAGGAGAAACAATAA...GGGGCCCAGCCTGAGGAAACACCCAGGGATGGCGACAAGCCAGAGGAGACTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532402.5
CDS-3UTR TCA 90 bp CCAAGGCAGAAGAAAGAATATCTCTCAGCACTAATGCTCCCCTTCCCTCCCCCTCTCAGCTGGGTCTTTTaGTCCTTGCGAGACCCTAGG +
Preference number: 4 (lower is better)
Translates to: PRQKKEYLSALMLPFPPPLSWVF*SLRDPR
Trigger: CCTAGGGTCTCGCAAGGATCAAAAGACCCAGCTGAG...AGGGGGAGGGAAGGGGAGCATTAGTGCTGAGAGATATTCTTTCTTCTGCCTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR GCA 90 bp TCCAAGGCAGAAGAAAGAATATCTCTCAGCACTAATGCTCCCCTTCCCTCCCCCAGAGGCCTGGCCGTATaGTTCTCTGTCGCTTGCAGA +
Preference number: 4 (lower is better)
Translates to: SKAEERISLSTNAPLPSPRGLAV*FSVACR
Trigger: TCTGCAAGCGACAGAGAAGCATACGGCCAGGCCTCT...GGGGGAGGGAAGGGGAGCATTAGTGCTGAGAGATATTCTTTCTTCTGCCTTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000648273.1
CDS-3UTR GCA 90 bp ACATCTGGTACACGGTATCGGGGTCGCCGAGGCTCCAGCTCATCAATCCTGAACAAGGCGGAATGGCCGTaGTGTCAAGATGATCTTGTA +
Preference number: 4 (lower is better)
Translates to: TSGTRYRGRRGSSSSILNKAEWP*CQDDLV
Trigger: TACAAGATCATCTTGACAGCACGGCCATTCCGCCTT...GTTCAGGATTGATGAGCTGGAGCCTCGGCGACCCCGATACCGTGTACCAGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000526210.1
ENST00000529737.5
ENST00000532402.5
ENST00000534613.5
CDS-3UTR GCA 90 bp ACGGTATCGGGGTCGCCGAGGCTCCAGCTCATCAATCCTGAACCGAGTCATGTTAAGGCGGAATGGCCGTaGTGTCAAGATGATCTTGTA +
Preference number: 4 (lower is better)
Translates to: TVSGSPRLQLINPEPSHVKAEWP*CQDDLV
Trigger: TACAAGATCATCTTGACAGCACGGCCATTCCGCCTT...AACATGACTCGGTTCAGGATTGATGAGCTGGAGCCTCGGCGACCCCGATACCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000526210.1
ENST00000529737.5
ENST00000532402.5
ENST00000534613.5
CDS-3UTR GCA 90 bp GAGATCACAAGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATTGGCTCATCTTTCTCTaGCTTCCCCTGAGTCTCCTC +
Preference number: 4 (lower is better)
Translates to: EITRGIWSPGSALSSCPNWLIFL*LPLSLL
Trigger: GAGGAGACTCAGGGGAAGGCAGAGAAAGATGAGCCA...ATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCTTGTGATCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR GCA 90 bp AGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGACATAGACATGCTCCATaGCTGGCAGAGAGAAGTCCA +
Preference number: 4 (lower is better)
Translates to: RGIWSPGSALSSCPNVGRHRHAP*LAERSP
Trigger: TGGACTTCTCTCTGCCAGGCATGGAGCATGTCTATG...TCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR GCA 90 bp CCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGAATCTGGGTCTTAGACCATAGACATGCTCCATaGCTGGCAGAGAGAAGTCCA +
Preference number: 4 (lower is better)
Translates to: PGSALSSCPNVGRIWVLDHRHAP*LAERSP
Trigger: TGGACTTCTCTCTGCCAGGCATGGAGCATGTCTATG...GTCTAAGACCCAGATTCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR GCA 90 bp GAGATCACAAGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATCAGCCTCAGGTTGTCTaGATGCTCAGGGATCCCATA +
Preference number: 4 (lower is better)
Translates to: EITRGIWSPGSALSSCPNQPQVV*MLRDPI
Trigger: TATGGGATCCCTGAGCATGCAGACAACCTGAGGCTG...ATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCTTGTGATCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR GCA 90 bp GCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATCAATGGAGTGGGAGGCGATGAGGGTTGTGTaGCAGGAGCACAGGCACAGA +
Preference number: 4 (lower is better)
Translates to: ATGCWGNEGKELVSMEWEAMRVV*QEHRHR
Trigger: TCTGTGCCTGTGCTCCTGGCACACAACCCTCATCGC...CTCCCACTCCATTGATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR GCA 90 bp GTGCTCCAGTTAGAGCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATCAAAGGGGCGTTCCATaGCCCCAGAGCGCTGTCTCA +
Preference number: 4 (lower is better)
Translates to: VLQLEQQDVGGMKGKSWYQRGVP*PQSAVS
Trigger: TGAGACAGCGCTCTGGGGGCATGGAACGCCCCTTTG...ATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGCTCTAACTGGAGCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR GCA 90 bp AGGGCAGCAAAGAATATCGCTGGCCCAAGGCATCTCGGATTATATCATTGTGCTCAAAGGGGCGTTCCATaGCCCCAGAGCGCTGTCTCA +
Preference number: 4 (lower is better)
Translates to: RAAKNIAGPRHLGLYHCAQRGVP*PQSAVS
Trigger: TGAGACAGCGCTCTGGGGGCATGGAACGCCCCTTTG...AGCACAATGATATAATCCGAGATGCCTTGGGCCAGCGATATTCTTTGCTGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532402.5
CDS-3UTR GCA 90 bp TCCAAGGCAGAAGAAAGAATATCTCTCAGCACTAATGCTCCCCTTCCCTCCCCCGTCCAAGTGGGCATGTaGCCGGAAGAATGGCTGGTA +
Preference number: 4 (lower is better)
Translates to: SKAEERISLSTNAPLPSPVQVGM*PEEWLV
Trigger: TACCAGCCATTCTTCCGGGCACATGCCCACTTGGAC...GGGGGAGGGAAGGGGAGCATTAGTGCTGAGAGATATTCTTTCTTCTGCCTTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR GCA 90 bp AGAGACAGAAAGCCGGGCTATTGGTGGATCAGCCACCAAAACATCTGGTACACGGTCCAAGTGGGCATGTaGCCGGAAGAATGGCTGGTA +
Preference number: 4 (lower is better)
Translates to: RDRKPGYWWISHQNIWYTVQVGM*PEEWLV
Trigger: TACCAGCCATTCTTCCGGGCACATGCCCACTTGGAC...CGTGTACCAGATGTTTTGGTGGCTGATCCACCAATAGCCCGGCTTTCTGTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532402.5
CDS-3UTR GCA 90 bp CCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGAATCTGGGTCTTAGACACCCTGAGGGCTAAGTaGAACAAAGAGAGTGATGGG +
Preference number: 4 (lower is better)
Translates to: PGSALSSCPNVGRIWVLDTLRAK*NKESDG
Trigger: CCCATCACTCTCTTTGTTGCACTTAGCCCTCAGGGT...GTCTAAGACCCAGATTCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR GCA 90 bp GTACCACAGCTGCTGGCTTTCCAGCCCCTATTATCACCACCCGCTCAATCCAGAACCCTGAGGGCTAAGTaGAACAAAGAGAGTGATGGG +
Preference number: 4 (lower is better)
Translates to: VPQLLAFQPLLSPPAQSRTLRAK*NKESDG
Trigger: CCCATCACTCTCTTTGTTGCACTTAGCCCTCAGGGT...TCTGGATTGAGCGGGTGGTGATAATAGGGGCTGGAAAGCCAGCAGCTGTGGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532402.5
CDS-3UTR GCA 90 bp AGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGATCAGCCCTCTCATCCTaGCCAAATGTTGGCAGAATC +
Preference number: 4 (lower is better)
Translates to: RGIWSPGSALSSCPNVGRSALSS*PNVGRI
Trigger: GATTCTGCCAACATTTGGGCAGGATGAGAGGGCTGA...TCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR GCA 90 bp TATTGGTGGATCAGCCACCAAAACATCTGGTACACGGTATCGGGGTCGCCGAGGTCAGCCCTCTCATCCTaGCCAAATGTTGGCAGAATC +
Preference number: 4 (lower is better)
Translates to: YWWISHQNIWYTVSGSPRSALSS*PNVGRI
Trigger: GATTCTGCCAACATTTGGGCAGGATGAGAGGGCTGA...CCTCGGCGACCCCGATACCGTGTACCAGATGTTTTGGTGGCTGATCCACCAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532402.5
CDS-3UTR GCA 90 bp CCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGAATCTGGGTCTTAGACTCAGCCCTCTCATCCTaGCCAAATGTTGGCAGAATC +
Preference number: 4 (lower is better)
Translates to: PGSALSSCPNVGRIWVLDSALSS*PNVGRI
Trigger: GATTCTGCCAACATTTGGGCAGGATGAGAGGGCTGA...GTCTAAGACCCAGATTCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp TCCAAGGCAGAAGAAAGAATATCTCTCAGCACTAATGCTCCCCTTCCCTCCCCCGTATGGAGAGAGGCCTaGCCGTATGCTTCTCTGTCG +
Preference number: 4 (lower is better)
Translates to: SKAEERISLSTNAPLPSPVWREA*PYASLS
Trigger: CGACAGAGAAGCATACGGCCAGGCCTCTCTCCATAC...GGGGGAGGGAAGGGGAGCATTAGTGCTGAGAGATATTCTTTCTTCTGCCTTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000648273.1
CDS-3UTR CCA 90 bp AGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGAACCTCATGGATCAGATaGACCGTGAGGGAATCAGGA +
Preference number: 4 (lower is better)
Translates to: RGIWSPGSALSSCPNVGRTSWIR*TVRESG
Trigger: TCCTGATTCCCTCACGGTCCATCTGATCCATGAGGT...TCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000648273.1
CDS-3UTR CCA 90 bp GAGATCACAAGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATAGCCACCAAAACATCTaGTACACGGTATCGGGGTCG +
Preference number: 4 (lower is better)
Translates to: EITRGIWSPGSALSSCPNSHQNI*YTVSGS
Trigger: CGACCCCGATACCGTGTACCAGATGTTTTGGTGGCT...ATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCTTGTGATCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp TATCGGGGTCGCCGAGGCTCCAGCTCATCAATCCTGAACCGAGTCATGTTCTTTAGCCACCAAAACATCTaGTACACGGTATCGGGGTCG +
Preference number: 4 (lower is better)
Translates to: YRGRRGSSSSILNRVMFFSHQNI*YTVSGS
Trigger: CGACCCCGATACCGTGTACCAGATGTTTTGGTGGCT...AAAGAACATGACTCGGTTCAGGATTGATGAGCTGGAGCCTCGGCGACCCCGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000526210.1
ENST00000529737.5
ENST00000532402.5
ENST00000534613.5
CDS-3UTR CCA 90 bp AGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGAAAGCCGGGCTATTGGTaGATCAGCCACCAAAACATC +
Preference number: 4 (lower is better)
Translates to: RGIWSPGSALSSCPNVGRKPGYW*ISHQNI
Trigger: GATGTTTTGGTGGCTGATCCACCAATAGCCCGGCTT...TCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp GCTATTGGTGGATCAGCCACCAAAACATCTGGTACACGGTATCGGGGTCGCCGAAAGCCGGGCTATTGGTaGATCAGCCACCAAAACATC +
Preference number: 4 (lower is better)
Translates to: AIGGSATKTSGTRYRGRRKPGYW*ISHQNI
Trigger: GATGTTTTGGTGGCTGATCCACCAATAGCCCGGCTT...TCGGCGACCCCGATACCGTGTACCAGATGTTTTGGTGGCTGATCCACCAATAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000526210.1
ENST00000529737.5
ENST00000532402.5
ENST00000534613.5
CDS-3UTR CCA 90 bp CCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGAATCTGGGTCTTAGACAGAAAGCCGGGCTATTaGTGGATCAGCCACCAAAAC +
Preference number: 4 (lower is better)
Translates to: PGSALSSCPNVGRIWVLDRKPGY*WISHQN
Trigger: GTTTTGGTGGCTGATCCACCAATAGCCCGGCTTTCT...GTCTAAGACCCAGATTCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp AGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGAAGGGTCCCTCAGCCATaGTTAACTCCACACTGTTCT +
Preference number: 4 (lower is better)
Translates to: RGIWSPGSALSSCPNVGRRVPQP*LTPHCS
Trigger: AGAACAGTGTGGAGTTAACCATGGCTGAGGGACCCT...TCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp CCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGAATCTGGGTCTTAGACAGGGTCCCTCAGCCATaGTTAACTCCACACTGTTCT +
Preference number: 4 (lower is better)
Translates to: PGSALSSCPNVGRIWVLDRVPQP*LTPHCS
Trigger: AGAACAGTGTGGAGTTAACCATGGCTGAGGGACCCT...GTCTAAGACCCAGATTCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp CCAAGGCAGAAGAAAGAATATCTCTCAGCACTAATGCTCCCCTTCCCTCCCCCTCTCCTCCCAGGCTCCTaGCTCATCTTTCTCTGCCTT +
Preference number: 4 (lower is better)
Translates to: PRQKKEYLSALMLPFPPPLLPGS*LIFLCL
Trigger: AAGGCAGAGAAAGATGAGCCAGGAGCCTGGGAGGAG...AGGGGGAGGGAAGGGGAGCATTAGTGCTGAGAGATATTCTTTCTTCTGCCTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp TCCAAGGCAGAAGAAAGAATATCTCTCAGCACTAATGCTCCCCTTCCCTCCCCCCCAAACCCACAGACATaGGGCCATACGGCTTGCTGT +
Preference number: 4 (lower is better)
Translates to: SKAEERISLSTNAPLPSPPNPQT*GHTACC
Trigger: ACAGCAAGCCGTATGGCCCCATGTCTGTGGGTTTGG...GGGGGAGGGAAGGGGAGCATTAGTGCTGAGAGATATTCTTTCTTCTGCCTTGGA
53% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp GAGATCACAAGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATGACATGCTCCATGCCTaGCAGAGAGAAGTCCAAACC +
Preference number: 4 (lower is better)
Translates to: EITRGIWSPGSALSSCPNDMLHA*QREVQT
Trigger: GGTTTGGACTTCTCTCTGCCAGGCATGGAGCATGTC...ATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCTTGTGATCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp GAGATCACAAGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATATTGTAGAGGCGATATaGCTCCCCACCCTCAGTGAC +
Preference number: 4 (lower is better)
Translates to: EITRGIWSPGSALSSCPNIVEAI*LPTLSD
Trigger: GTCACTGAGGGTGGGGAGCCATATCGCCTCTACAAT...ATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCTTGTGATCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp GACCCTAGGGGCCCTCTGATGCTCAAACTCCAAGAGTCCTCGGGCATTGACACTTCTTCCCGGCAGTGTTaGAAGATATATCAACCCAGG +
Preference number: 4 (lower is better)
Translates to: DPRGPLMLKLQESSGIDTSSRQC*KIYQPR
Trigger: CCTGGGTTGATATATCTTCCAACACTGCCGGGAAGA...AGTGTCAATGCCCGAGGACTCTTGGAGTTTGAGCATCAGAGGGCCCCTAGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532402.5
CDS-3UTR CCA 90 bp GCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATCAATGGAGTGGGAGAGTGGGGGCAACGCCTaGGTTCCTGTGAGACTAGCA +
Preference number: 4 (lower is better)
Translates to: ATGCWGNEGKELVSMEWESGGNA*VPVRLA
Trigger: TGCTAGTCTCACAGGAACCCAGGCGTTGCCCCCACT...CTCCCACTCCATTGATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp TTGACACTAAGCAAAAGACTTCGGTCCTCTAGTAGGTCAAGGCGGAATGGCCGTAGTGGGGGCAACGCCTaGGTTCCTGTGAGACTAGCA +
Preference number: 4 (lower is better)
Translates to: LTLSKRLRSSSRSRRNGRSGGNA*VPVRLA
Trigger: TGCTAGTCTCACAGGAACCCAGGCGTTGCCCCCACT...ACGGCCATTCCGCCTTGACCTACTAGAGGACCGAAGTCTTTTGCTTAGTGTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532402.5
CDS-3UTR CCA 90 bp GCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATCAATGGAGTGGGAGGAGTCCACCTTGATGTaGGGGTCTACGATGGCCACC +
Preference number: 4 (lower is better)
Translates to: ATGCWGNEGKELVSMEWEESTLM*GSTMAT
Trigger: GGTGGCCATCGTAGACCCCCACATCAAGGTGGACTC...CTCCCACTCCATTGATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp CCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGAATCTGGGTCTTAGACGCGCACAAGCAGCTCTaGCTCTGGGTTTTTGAAGAA +
Preference number: 4 (lower is better)
Translates to: PGSALSSCPNVGRIWVLDAHKQL*LWVFEE
Trigger: TTCTTCAAAAACCCAGAGCCAGAGCTGCTTGTGCGC...GTCTAAGACCCAGATTCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp GAGGTCTCAGGGTCATGCTGGAAGGACAGGCGGCTTTCTGGAGATCCTTTTGTCGCGCACAAGCAGCTCTaGCTCTGGGTTTTTGAAGAA +
Preference number: 4 (lower is better)
Translates to: EVSGSCWKDRRLSGDPFVAHKQL*LWVFEE
Trigger: TTCTTCAAAAACCCAGAGCCAGAGCTGCTTGTGCGC...GACAAAAGGATCTCCAGAAAGCCGCCTGTCCTTCCAGCATGACCCTGAGACCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532402.5
CDS-3UTR CCA 90 bp AGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGAGCGCACAAGCAGCTCTaGCTCTGGGTTTTTGAAGAA +
Preference number: 4 (lower is better)
Translates to: RGIWSPGSALSSCPNVGRAHKQL*LWVFEE
Trigger: TTCTTCAAAAACCCAGAGCCAGAGCTGCTTGTGCGC...TCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp ATGCTGGAAGGACAGGCGGCTTTCTGGAGATCCTTTTGTCTGGAGTACCACAGCATGTGCCCGGAAGAATaGCTGGTAAGCACCCATCTG +
Preference number: 4 (lower is better)
Translates to: MLEGQAAFWRSFCLEYHSMCPEE*LVSTHL
Trigger: CAGATGGGTGCTTACCAGCCATTCTTCCGGGCACAT...GCTGTGGTACTCCAGACAAAAGGATCTCCAGAAAGCCGCCTGTCCTTCCAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532402.5
CDS-3UTR CCA 90 bp GAGATCACAAGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATATGTGCCCGGAAGAATaGCTGGTAAGCACCCATCTG +
Preference number: 4 (lower is better)
Translates to: EITRGIWSPGSALSSCPNMCPEE*LVSTHL
Trigger: CAGATGGGTGCTTACCAGCCATTCTTCCGGGCACAT...ATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCTTGTGATCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp GCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATCAATGGAGTGGGAGCGCCCAGTGTCCAAGTaGGCATGTGCCCGGAAGAAT +
Preference number: 4 (lower is better)
Translates to: ATGCWGNEGKELVSMEWERPVSK*ACARKN
Trigger: ATTCTTCCGGGCACATGCCCACTTGGACACTGGGCG...CTCCCACTCCATTGATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp AGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGAATTGTCCCTCCACGCTaGAACACAGGGATACTGCTT +
Preference number: 4 (lower is better)
Translates to: RGIWSPGSALSSCPNVGRIVPPR*NTGILL
Trigger: AAGCAGTATCCCTGTGTTCCAGCGTGGAGGGACAAT...TCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp GCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATCAATGGAGTGGGAGCAGGGTCTGCTGAGCTaGAGACAAGGGTGTTGCCAG +
Preference number: 4 (lower is better)
Translates to: ATGCWGNEGKELVSMEWEQGLLS*RQGCCQ
Trigger: CTGGCAACACCCTTGTCTCCAGCTCAGCAGACCCTG...CTCCCACTCCATTGATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp CCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGAATCTGGGTCTTAGACGAGTACCACAGCTGCTaGCTTTCCAGCCCCTATTAT +
Preference number: 4 (lower is better)
Translates to: PGSALSSCPNVGRIWVLDEYHSC*LSSPYY
Trigger: ATAATAGGGGCTGGAAAGCCAGCAGCTGTGGTACTC...GTCTAAGACCCAGATTCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp GAGATCACAAGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATGGACAGGCGGCTTTCTaGAGATCCTTTTGTCTGGAG +
Preference number: 4 (lower is better)
Translates to: EITRGIWSPGSALSSCPNGQAAF*RSFCLE
Trigger: CTCCAGACAAAAGGATCTCCAGAAAGCCGCCTGTCC...ATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCTTGTGATCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp GAGATCACAAGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATATCACAAGAGGAATTTaGAGCCCAGGGTCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: EITRGIWSPGSALSSCPNITRGI*SPGSAL
Trigger: GAGGGCTGACCCTGGGCTCCAAATTCCTCTTGTGAT...ATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCTTGTGATCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp CTTCGGTCCTCTAGTAGGTCAAGGCGGAATGGCCGTGCTGTCAAGATGATCTTGATCACAAGAGGAATTTaGAGCCCAGGGTCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: LRSSSRSRRNGRAVKMILITRGI*SPGSAL
Trigger: GAGGGCTGACCCTGGGCTCCAAATTCCTCTTGTGAT...CAAGATCATCTTGACAGCACGGCCATTCCGCCTTGACCTACTAGAGGACCGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532402.5
CDS-3UTR TCA 90 bp TGGCTCATCTTTCTCTGCCTTCCCCTGAGTCTCCTCTGGCTTGTCGCCATCCCTCCAGCTCATCAATCCTaGACCGAGTCATGTTCTTTT +
Preference number: 4 (lower is better)
Translates to: WLIFLCLPLSLLWLVAIPPAHQS*TESCSF
Trigger: AAAAGAACATGACTCGGTTCAGGATTGATGAGCTGG...AGGGATGGCGACAAGCCAGAGGAGACTCAGGGGAAGGCAGAGAAAGATGAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532402.5
ENST00000534613.5
CDS-3UTR TCA 90 bp GCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATCAATGGAGTGGGAGGCCGTGCTGTCAAGATaGTCTTGTAGGGTCCCTCAG +
Preference number: 4 (lower is better)
Translates to: ATGCWGNEGKELVSMEWEAVLSR*SCRVPQ
Trigger: CTGAGGGACCCTACAAGATCATCTTGACAGCACGGC...CTCCCACTCCATTGATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR TCA 90 bp GCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATCAATGGAGTGGGAGACCCTAGGGGCCCTCTaGTGCTCAAACTCCAAGAGT +
Preference number: 4 (lower is better)
Translates to: ATGCWGNEGKELVSMEWETLGAL*CSNSKS
Trigger: ACTCTTGGAGTTTGAGCATCAGAGGGCCCCTAGGGT...CTCCCACTCCATTGATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR TCA 90 bp GAGATCACAAGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATGGCTTGCTGTCAGAGTaGGTTTTGAATGTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: EITRGIWSPGSALSSCPNGLLSE*VLNVSS
Trigger: GGAGGAGACATTCAAAACTCACTCTGACAGCAAGCC...ATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCTTGTGATCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR TCA 90 bp CCAAGGCAGAAGAAAGAATATCTCTCAGCACTAATGCTCCCCTTCCCTCCCCCTAGGTCTCTGCAGCATTaGGCCAGAAGATGCCCAAGT +
Preference number: 4 (lower is better)
Translates to: PRQKKEYLSALMLPFPPPRSLQH*ARRCPS
Trigger: ACTTGGGCATCTTCTGGCTCAATGCTGCAGAGACCT...AGGGGGAGGGAAGGGGAGCATTAGTGCTGAGAGATATTCTTTCTTCTGCCTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR TCA 90 bp CCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGAATCTGGGTCTTAGACAATGATGCCAGTCTCTaGCATCCAGCGAACATCTGT +
Preference number: 4 (lower is better)
Translates to: PGSALSSCPNVGRIWVLDNDASL*HPANIC
Trigger: ACAGATGTTCGCTGGATGTCAGAGACTGGCATCATT...GTCTAAGACCCAGATTCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR TCA 90 bp GTGCTCCAGTTAGAGCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATGACTGGGGTCCCAGGTaGAATACCGCTTGCCATCAG +
Preference number: 4 (lower is better)
Translates to: VLQLEQQDVGGMKGKSWYDWGPR*NTACHQ
Trigger: CTGATGGCAAGCGGTATTTCACCTGGGACCCCAGTC...ATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGCTCTAACTGGAGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR TCA 90 bp GCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATCAATGGAGTGGGAGCTGGCTCTGGGTTTTTaGAGAAGCCACCCACATCCG +
Preference number: 4 (lower is better)
Translates to: ATGCWGNEGKELVSMEWELALGF*RSHPHP
Trigger: CGGATGTGGGTGGCTTCTTCAAAAACCCAGAGCCAG...CTCCCACTCCATTGATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR TCA 90 bp TCAGCCACCAAAACATCTGGTACACGGTATCGGGGTCGCCGAGGCTCCAGCTCAATTATATCATTGTGCTaGGATGGTAACAGCCATGGC +
Preference number: 4 (lower is better)
Translates to: SATKTSGTRYRGRRGSSSIISLC*DGNSHG
Trigger: GCCATGGCTGTTACCATCTCAGCACAATGATATAAT...TGAGCTGGAGCCTCGGCGACCCCGATACCGTGTACCAGATGTTTTGGTGGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532402.5
CDS-3UTR TCA 90 bp GCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATCAATGGAGTGGGAGCCTTCCCGATGGGCCTaGTATAAGAGGGTGTACCAG +
Preference number: 4 (lower is better)
Translates to: ATGCWGNEGKELVSMEWEPSRWA*YKRVYQ
Trigger: CTGGTACACCCTCTTATATCAGGCCCATCGGGAAGG...CTCCCACTCCATTGATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR TCA 90 bp GCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATCAATGGAGTGGGAGGAGTCTGATACAGGGTaGACCAGCAACGCATCCCCA +
Preference number: 4 (lower is better)
Translates to: ATGCWGNEGKELVSMEWEESDTG*TSNASP
Trigger: TGGGGATGCGTTGCTGGTTCACCCTGTATCAGACTC...CTCCCACTCCATTGATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR TCA 90 bp TCCAAGGCAGAAGAAAGAATATCTCTCAGCACTAATGCTCCCCTTCCCTCCCCCATGGGCTCCAGAGTCTaGTACAGGGTGAACCAGCAA +
Preference number: 4 (lower is better)
Translates to: SKAEERISLSTNAPLPSPMGSRV*YRVNQQ
Trigger: TTGCTGGTTCACCCTGTATCAGACTCTGGAGCCCAT...GGGGGAGGGAAGGGGAGCATTAGTGCTGAGAGATATTCTTTCTTCTGCCTTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR TCA 90 bp GTACCACAGCTGCTGGCTTTCCAGCCCCTATTATCACCACCCGCTCAATCCAGAGTGCAACAAAGAGAGTaGTGGGGTCATCCTTCATAC +
Preference number: 4 (lower is better)
Translates to: VPQLLAFQPLLSPPAQSRVQQRE*WGHPSY
Trigger: GTATGAAGGATGACCCCATCACTCTCTTTGTTGCAC...TCTGGATTGAGCGGGTGGTGATAATAGGGGCTGGAAAGCCAGCAGCTGTGGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532402.5
CDS-3UTR TCA 90 bp CCAAGGCAGAAGAAAGAATATCTCTCAGCACTAATGCTCCCCTTCCCTCCCCCTGGTGTTGCCAGAGAATaGGAATCGACGCAGCAGGAA +
Preference number: 4 (lower is better)
Translates to: PRQKKEYLSALMLPFPPPGVARE*ESTQQE
Trigger: TTCCTGCTGCGTCGATTCTCATTCTCTGGCAACACC...AGGGGGAGGGAAGGGGAGCATTAGTGCTGAGAGATATTCTTTCTTCTGCCTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR TCA 90 bp GCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATCAATGGAGTGGGAGTCCTTCAGGGTCTGCTaGGCTGGAGACAAGGGTGTT +
Preference number: 4 (lower is better)
Translates to: ATGCWGNEGKELVSMEWESFRVC*AGDKGV
Trigger: AACACCCTTGTCTCCAGCTCAGCAGACCCTGAAGGA...CTCCCACTCCATTGATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR TCA 90 bp CCAAGGCAGAAGAAAGAATATCTCTCAGCACTAATGCTCCCCTTCCCTCCCCCTAATCAGATGCCACATTaGTGCCAGGCTTGCGCAGGA +
Preference number: 4 (lower is better)
Translates to: PRQKKEYLSALMLPFPPPNQMPH*CQACAG
Trigger: TCCTGCGCAAGCCTGGCATCAATGTGGCATCTGATT...AGGGGGAGGGAAGGGGAGCATTAGTGCTGAGAGATATTCTTTCTTCTGCCTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR TCA 90 bp AGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGATTGGGTTATCGCAGGTaGATACTCCAATCAGATGCC +
Preference number: 4 (lower is better)
Translates to: RGIWSPGSALSSCPNVGRLGYRR*ILQSDA
Trigger: GGCATCTGATTGGAGTATTCACCTGCGATAACCCAA...TCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR TCA 90 bp GCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATCAATGGAGTGGGAGCTCAGCTGGGTCTTTTaGTCCTTGCGAGACCCTAGG +
Preference number: 4 (lower is better)
Translates to: ATGCWGNEGKELVSMEWELSWVF*SLRDPR
Trigger: CCTAGGGTCTCGCAAGGATCAAAAGACCCAGCTGAG...CTCCCACTCCATTGATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR GCA 90 bp GTATCGGGGTCGCCGAGGCTCCAGCTCATCAATCCTGAACCGAGTCATGTTCTTAAGGCGGAATGGCCGTaGTGTCAAGATGATCTTGTA +
Preference number: 4 (lower is better)
Translates to: VSGSPRLQLINPEPSHVLKAEWP*CQDDLV
Trigger: TACAAGATCATCTTGACAGCACGGCCATTCCGCCTT...AAGAACATGACTCGGTTCAGGATTGATGAGCTGGAGCCTCGGCGACCCCGATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000526210.1
ENST00000529737.5
ENST00000532402.5
ENST00000534613.5
CDS-3UTR GCA 90 bp AGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGAAAGGCGGAATGGCCGTaGTGTCAAGATGATCTTGTA +
Preference number: 4 (lower is better)
Translates to: RGIWSPGSALSSCPNVGRKAEWP*CQDDLV
Trigger: TACAAGATCATCTTGACAGCACGGCCATTCCGCCTT...TCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR GCA 90 bp CCAAGGCAGAAGAAAGAATATCTCTCAGCACTAATGCTCCCCTTCCCTCCCCCTCAGCCTCAGGTTGTCTaGATGCTCAGGGATCCCATA +
Preference number: 4 (lower is better)
Translates to: PRQKKEYLSALMLPFPPPQPQVV*MLRDPI
Trigger: TATGGGATCCCTGAGCATGCAGACAACCTGAGGCTG...AGGGGGAGGGAAGGGGAGCATTAGTGCTGAGAGATATTCTTTCTTCTGCCTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR GCA 90 bp AGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGAATCAACCCAGGTCTCTaGAGCATTGAGCCAGAAGAT +
Preference number: 4 (lower is better)
Translates to: RGIWSPGSALSSCPNVGRINPGL*SIEPED
Trigger: ATCTTCTGGCTCAATGCTGCAGAGACCTGGGTTGAT...TCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR GCA 90 bp GTGGATCAGCCACCAAAACATCTGGTACACGGTATCGGGGTCGCCGAGGCTCCAGTGAGACTAGCATATTaGCGGAAAACATCAGAGATG +
Preference number: 4 (lower is better)
Translates to: VDQPPKHLVHGIGVAEAPVRLAY*RKTSEM
Trigger: CATCTCTGATGTTTTCCGGCAATATGCTAGTCTCAC...TGGAGCCTCGGCGACCCCGATACCGTGTACCAGATGTTTTGGTGGCTGATCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532402.5
CDS-3UTR GCA 90 bp GTGCTCCAGTTAGAGCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATGAGGTCTCAGGGTCATaGTGGAAGGACAGGCGGCTT +
Preference number: 4 (lower is better)
Translates to: VLQLEQQDVGGMKGKSWYEVSGS*WKDRRL
Trigger: AAGCCGCCTGTCCTTCCAGCATGACCCTGAGACCTC...ATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGCTCTAACTGGAGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR GCA 90 bp GAGATCACAAGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATTCAGCCCTCTCATCCTaGCCAAATGTTGGCAGAATC +
Preference number: 4 (lower is better)
Translates to: EITRGIWSPGSALSSCPNSALSS*PNVGRI
Trigger: GATTCTGCCAACATTTGGGCAGGATGAGAGGGCTGA...ATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCTTGTGATCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR GCA 90 bp GTGCTCCAGTTAGAGCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATGGGTCTTTTGATCCTTaGGAGACCCTAGGGGCCCTC +
Preference number: 4 (lower is better)
Translates to: VLQLEQQDVGGMKGKSWYGSFDP*ETLGAL
Trigger: GAGGGCCCCTAGGGTCTCGCAAGGATCAAAAGACCC...ATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGCTCTAACTGGAGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR GCA 90 bp TCCCAACCCCTGTACTCACGAGACCCTAGGGGCCCTCTGATGCTCAAACTCCAAAGCACCAGCAACACTTaGAGAAAGAACTCTCTTCAC +
Preference number: 4 (lower is better)
Translates to: SQPLYSRDPRGPLMLKLQSTSNT*RKNSLH
Trigger: GTGAAGAGAGTTCTTTCTGCAAGTGTTGCTGGTGCT...TTGGAGTTTGAGCATCAGAGGGCCCCTAGGGTCTCGTGAGTACAGGGGTTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526210.1
CDS-3UTR CCA 90 bp GCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATCAATGGAGTGGGAGGTATGGAGAGAGGCCTaGCCGTATGCTTCTCTGTCG +
Preference number: 4 (lower is better)
Translates to: ATGCWGNEGKELVSMEWEVWREA*PYASLS
Trigger: CGACAGAGAAGCATACGGCCAGGCCTCTCTCCATAC...CTCCCACTCCATTGATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000648273.1
CDS-3UTR CCA 90 bp GTGCTCCAGTTAGAGCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATCAGCAAGGCTCGGTATaGAGAGAGGCCTGGCCGTAT +
Preference number: 4 (lower is better)
Translates to: VLQLEQQDVGGMKGKSWYQQGSV*REAWPY
Trigger: ATACGGCCAGGCCTCTCTCCATACCGAGCCTTGCTG...ATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGCTCTAACTGGAGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000648273.1
CDS-3UTR CCA 90 bp AGCAAAAGACTTCGGTCCTCTAGTAGGTCAAGGCGGAATGGCCGTGCTGTCAAGACCTCATGGATCAGATaGACCGTGAGGGAATCAGGA +
Preference number: 4 (lower is better)
Translates to: SKRLRSSSRSRRNGRAVKTSWIR*TVRESG
Trigger: TCCTGATTCCCTCACGGTCCATCTGATCCATGAGGT...CTTGACAGCACGGCCATTCCGCCTTGACCTACTAGAGGACCGAAGTCTTTTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529737.5
CDS-3UTR CCA 90 bp TCCAAGGCAGAAGAAAGAATATCTCTCAGCACTAATGCTCCCCTTCCCTCCCCCACCTTGGTGACCTCATaGATCAGATGGACCGTGAGG +
Preference number: 4 (lower is better)
Translates to: SKAEERISLSTNAPLPSPTLVTS*IRWTVR
Trigger: CCTCACGGTCCATCTGATCCATGAGGTCACCAAGGT...GGGGGAGGGAAGGGGAGCATTAGTGCTGAGAGATATTCTTTCTTCTGCCTTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000648273.1
CDS-3UTR CCA 90 bp CAGAGACAGAAAGCCGGGCTATTGGTGGATCAGCCACCAAAACATCTGGTACACACCTTGGTGACCTCATaGATCAGATGGACCGTGAGG +
Preference number: 4 (lower is better)
Translates to: QRQKAGLLVDQPPKHLVHTLVTS*IRWTVR
Trigger: CCTCACGGTCCATCTGATCCATGAGGTCACCAAGGT...GTGTACCAGATGTTTTGGTGGCTGATCCACCAATAGCCCGGCTTTCTGTCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529737.5
CDS-3UTR CCA 90 bp CAGAGACAGAAAGCCGGGCTATTGGTGGATCAGCCACCAAAACATCTGGTACACAGCCACCAAAACATCTaGTACACGGTATCGGGGTCG +
Preference number: 4 (lower is better)
Translates to: QRQKAGLLVDQPPKHLVHSHQNI*YTVSGS
Trigger: CGACCCCGATACCGTGTACCAGATGTTTTGGTGGCT...GTGTACCAGATGTTTTGGTGGCTGATCCACCAATAGCCCGGCTTTCTGTCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000526210.1
ENST00000529737.5
ENST00000532402.5
ENST00000534613.5
CDS-3UTR CCA 90 bp AGCAAAAGACTTCGGTCCTCTAGTAGGTCAAGGCGGAATGGCCGTGCTGTCAAGAGAAAGCCGGGCTATTaGTGGATCAGCCACCAAAAC +
Preference number: 4 (lower is better)
Translates to: SKRLRSSSRSRRNGRAVKRKPGY*WISHQN
Trigger: GTTTTGGTGGCTGATCCACCAATAGCCCGGCTTTCT...CTTGACAGCACGGCCATTCCGCCTTGACCTACTAGAGGACCGAAGTCTTTTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526210.1
ENST00000529737.5
ENST00000532402.5
ENST00000534613.5
CDS-3UTR CCA 90 bp GCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATCAATGGAGTGGGAGCCAAACCCACAGACATaGGGCCATACGGCTTGCTGT +
Preference number: 4 (lower is better)
Translates to: ATGCWGNEGKELVSMEWEPNPQT*GHTACC
Trigger: ACAGCAAGCCGTATGGCCCCATGTCTGTGGGTTTGG...CTCCCACTCCATTGATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp TCCAAGGCAGAAGAAAGAATATCTCTCAGCACTAATGCTCCCCTTCCCTCCCCCGACATGCTCCATGCCTaGCAGAGAGAAGTCCAAACC +
Preference number: 4 (lower is better)
Translates to: SKAEERISLSTNAPLPSPDMLHA*QREVQT
Trigger: GGTTTGGACTTCTCTCTGCCAGGCATGGAGCATGTC...GGGGGAGGGAAGGGGAGCATTAGTGCTGAGAGATATTCTTTCTTCTGCCTTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp TCCAAGGCAGAAGAAAGAATATCTCTCAGCACTAATGCTCCCCTTCCCTCCCCCATTGTAGAGGCGATATaGCTCCCCACCCTCAGTGAC +
Preference number: 4 (lower is better)
Translates to: SKAEERISLSTNAPLPSPIVEAI*LPTLSD
Trigger: GTCACTGAGGGTGGGGAGCCATATCGCCTCTACAAT...GGGGGAGGGAAGGGGAGCATTAGTGCTGAGAGATATTCTTTCTTCTGCCTTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp AGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGACCCATACAAGGCCATTaGGTTGTACAGCTCATACTG +
Preference number: 4 (lower is better)
Translates to: RGIWSPGSALSSCPNVGRPIQGH*VVQLIL
Trigger: CAGTATGAGCTGTACAACCCAATGGCCTTGTATGGG...TCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp CCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGAATCTGGGTCTTAGACCCCATACAAGGCCATTaGGTTGTACAGCTCATACTG +
Preference number: 4 (lower is better)
Translates to: PGSALSSCPNVGRIWVLDPIQGH*VVQLIL
Trigger: CAGTATGAGCTGTACAACCCAATGGCCTTGTATGGG...GTCTAAGACCCAGATTCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp GTGCTCCAGTTAGAGCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATAGTGGGGGCAACGCCTaGGTTCCTGTGAGACTAGCA +
Preference number: 4 (lower is better)
Translates to: VLQLEQQDVGGMKGKSWYSGGNA*VPVRLA
Trigger: TGCTAGTCTCACAGGAACCCAGGCGTTGCCCCCACT...ATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGCTCTAACTGGAGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp CCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGAATCTGGGTCTTAGACTCCAGACAAAGAGGTTaGGAGCTGAGCCCTCATAAT +
Preference number: 4 (lower is better)
Translates to: PGSALSSCPNVGRIWVLDSRQRG*ELSPHN
Trigger: ATTATGAGGGCTCAGCTCCCAACCTCTTTGTCTGGA...GTCTAAGACCCAGATTCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp AGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGATCCAGACAAAGAGGTTaGGAGCTGAGCCCTCATAAT +
Preference number: 4 (lower is better)
Translates to: RGIWSPGSALSSCPNVGRSRQRG*ELSPHN
Trigger: ATTATGAGGGCTCAGCTCCCAACCTCTTTGTCTGGA...TCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp GAGATCACAAGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATAAGCAGCTCTGGCTCTaGGTTTTTGAAGAAGCCACC +
Preference number: 4 (lower is better)
Translates to: EITRGIWSPGSALSSCPNKQLWL*VFEEAT
Trigger: GGTGGCTTCTTCAAAAACCCAGAGCCAGAGCTGCTT...ATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCTTGTGATCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp TCCAAGGCAGAAGAAAGAATATCTCTCAGCACTAATGCTCCCCTTCCCTCCCCCATGTGCCCGGAAGAATaGCTGGTAAGCACCCATCTG +
Preference number: 4 (lower is better)
Translates to: SKAEERISLSTNAPLPSPMCPEE*LVSTHL
Trigger: CAGATGGGTGCTTACCAGCCATTCTTCCGGGCACAT...GGGGGAGGGAAGGGGAGCATTAGTGCTGAGAGATATTCTTTCTTCTGCCTTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp GTGCTCCAGTTAGAGCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATCGCCCAGTGTCCAAGTaGGCATGTGCCCGGAAGAAT +
Preference number: 4 (lower is better)
Translates to: VLQLEQQDVGGMKGKSWYRPVSK*ACARKN
Trigger: ATTCTTCCGGGCACATGCCCACTTGGACACTGGGCG...ATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGCTCTAACTGGAGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp TCGGGGTCGCCGAGGCTCCAGCTCATCAATCCTGAACCGAGTCATGTTCTTTTGCCGCTCAATCCAGATTaGTGTCTCAAAGTGTCCTTC +
Preference number: 4 (lower is better)
Translates to: SGSPRLQLINPEPSHVLLPLNPD*CLKVSF
Trigger: GAAGGACACTTTGAGACACCAATCTGGATTGAGCGG...CAAAAGAACATGACTCGGTTCAGGATTGATGAGCTGGAGCCTCGGCGACCCCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532402.5
CDS-3UTR CCA 90 bp AGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGACCGCTCAATCCAGATTaGTGTCTCAAAGTGTCCTTC +
Preference number: 4 (lower is better)
Translates to: RGIWSPGSALSSCPNVGRPLNPD*CLKVSF
Trigger: GAAGGACACTTTGAGACACCAATCTGGATTGAGCGG...TCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp TCCAAGGCAGAAGAAAGAATATCTCTCAGCACTAATGCTCCCCTTCCCTCCCCCGGAGATCCTTTTGTCTaGAGTACCACAGCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: SKAEERISLSTNAPLPSPGDPFV*STTAAG
Trigger: GCCAGCAGCTGTGGTACTCCAGACAAAAGGATCTCC...GGGGGAGGGAAGGGGAGCATTAGTGCTGAGAGATATTCTTTCTTCTGCCTTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp CCAAGGCAGAAGAAAGAATATCTCTCAGCACTAATGCTCCCCTTCCCTCCCCCTGGAGATCCTTTTGTCTaGAGTACCACAGCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: PRQKKEYLSALMLPFPPPGDPFV*STTAAG
Trigger: GCCAGCAGCTGTGGTACTCCAGACAAAAGGATCTCC...AGGGGGAGGGAAGGGGAGCATTAGTGCTGAGAGATATTCTTTCTTCTGCCTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp CAGAAAGCCGGGCTATTGGTGGATCAGCCACCAAAACATCTGGTACACGGTATCGGAGATCCTTTTGTCTaGAGTACCACAGCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: QKAGLLVDQPPKHLVHGIGDPFV*STTAAG
Trigger: GCCAGCAGCTGTGGTACTCCAGACAAAAGGATCTCC...GATACCGTGTACCAGATGTTTTGGTGGCTGATCCACCAATAGCCCGGCTTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532402.5
CDS-3UTR CCA 90 bp TCCAAGGCAGAAGAAAGAATATCTCTCAGCACTAATGCTCCCCTTCCCTCCCCCGGACAGGCGGCTTTCTaGAGATCCTTTTGTCTGGAG +
Preference number: 4 (lower is better)
Translates to: SKAEERISLSTNAPLPSPGQAAF*RSFCLE
Trigger: CTCCAGACAAAAGGATCTCCAGAAAGCCGCCTGTCC...GGGGGAGGGAAGGGGAGCATTAGTGCTGAGAGATATTCTTTCTTCTGCCTTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp CCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGAATCTGGGTCTTAGACACCCAGAACATCCCTTaGGTTATCGCAGGTGAATAC +
Preference number: 4 (lower is better)
Translates to: PGSALSSCPNVGRIWVLDTQNIP*VIAGEY
Trigger: GTATTCACCTGCGATAACCCAAGGGATGTTCTGGGT...GTCTAAGACCCAGATTCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp AGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGAACCCAGAACATCCCTTaGGTTATCGCAGGTGAATAC +
Preference number: 4 (lower is better)
Translates to: RGIWSPGSALSSCPNVGRTQNIP*VIAGEY
Trigger: GTATTCACCTGCGATAACCCAAGGGATGTTCTGGGT...TCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp TCCAAGGCAGAAGAAAGAATATCTCTCAGCACTAATGCTCCCCTTCCCTCCCCCATCACAAGAGGAATTTaGAGCCCAGGGTCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: SKAEERISLSTNAPLPSPITRGI*SPGSAL
Trigger: GAGGGCTGACCCTGGGCTCCAAATTCCTCTTGTGAT...GGGGGAGGGAAGGGGAGCATTAGTGCTGAGAGATATTCTTTCTTCTGCCTTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp TCAGCCACCAAAACATCTGGTACACGGTATCGGGGTCGCCGAGGCTCCAGCTCAATGAAGGGAAAGAGTTaGTATCAATGGAGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: SATKTSGTRYRGRRGSSSMKGKS*YQWSGR
Trigger: TCTCCCACTCCATTGATACCAACTCTTTCCCTTCAT...TGAGCTGGAGCCTCGGCGACCCCGATACCGTGTACCAGATGTTTTGGTGGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532402.5
CDS-3UTR CCA 90 bp CCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGAATCTGGGTCTTAGACAGAGCAACAGGATGTTaGGGGAATGAAGGGAAAGAG +
Preference number: 4 (lower is better)
Translates to: PGSALSSCPNVGRIWVLDRATGC*GNEGKE
Trigger: CTCTTTCCCTTCATTCCCCCAACATCCTGTTGCTCT...GTCTAAGACCCAGATTCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp GTCAAGGCGGAATGGCCGTGCTGTCAAGATGATCTTGTAGGGTCCCTCAGCCATAGAGCAACAGGATGTTaGGGGAATGAAGGGAAAGAG +
Preference number: 4 (lower is better)
Translates to: VKAEWPCCQDDLVGSLSHRATGC*GNEGKE
Trigger: CTCTTTCCCTTCATTCCCCCAACATCCTGTTGCTCT...ATGGCTGAGGGACCCTACAAGATCATCTTGACAGCACGGCCATTCCGCCTTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532402.5
CDS-3UTR TCA 90 bp TATTGGTGGATCAGCCACCAAAACATCTGGTACACGGTATCGGGGTCGCCGAGGCCAGCTCATCAATCCTaGACCGAGTCATGTTCTTTT +
Preference number: 4 (lower is better)
Translates to: YWWISHQNIWYTVSGSPRPAHQS*TESCSF
Trigger: AAAAGAACATGACTCGGTTCAGGATTGATGAGCTGG...CCTCGGCGACCCCGATACCGTGTACCAGATGTTTTGGTGGCTGATCCACCAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526210.1
ENST00000529737.5
ENST00000532402.5
ENST00000534613.5
CDS-3UTR TCA 90 bp AGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGACCAGCTCATCAATCCTaGACCGAGTCATGTTCTTTT +
Preference number: 4 (lower is better)
Translates to: RGIWSPGSALSSCPNVGRPAHQS*TESCSF
Trigger: AAAAGAACATGACTCGGTTCAGGATTGATGAGCTGG...TCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR TCA 90 bp GTGCTCCAGTTAGAGCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATGCCGTGCTGTCAAGATaGTCTTGTAGGGTCCCTCAG +
Preference number: 4 (lower is better)
Translates to: VLQLEQQDVGGMKGKSWYAVLSR*SCRVPQ
Trigger: CTGAGGGACCCTACAAGATCATCTTGACAGCACGGC...ATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGCTCTAACTGGAGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR TCA 90 bp GTGCTCCAGTTAGAGCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATACCCTAGGGGCCCTCTaGTGCTCAAACTCCAAGAGT +
Preference number: 4 (lower is better)
Translates to: VLQLEQQDVGGMKGKSWYTLGAL*CSNSKS
Trigger: ACTCTTGGAGTTTGAGCATCAGAGGGCCCCTAGGGT...ATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGCTCTAACTGGAGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR TCA 90 bp AGACAGAAAGCCGGGCTATTGGTGGATCAGCCACCAAAACATCTGGTACACGGTTGTCAGAGTGAGTTTTaGATGTCTCCTCCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: RQKAGLLVDQPPKHLVHGCQSEF*MSPPRL
Trigger: GAGCCTGGGAGGAGACATTCAAAACTCACTCTGACA...ACCGTGTACCAGATGTTTTGGTGGCTGATCCACCAATAGCCCGGCTTTCTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532402.5
ENST00000534613.5
CDS-3UTR TCA 90 bp CCAAGGCAGAAGAAAGAATATCTCTCAGCACTAATGCTCCCCTTCCCTCCCCCTGGCTTGCTGTCAGAGTaGGTTTTGAATGTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: PRQKKEYLSALMLPFPPPGLLSE*VLNVSS
Trigger: GGAGGAGACATTCAAAACTCACTCTGACAGCAAGCC...AGGGGGAGGGAAGGGGAGCATTAGTGCTGAGAGATATTCTTTCTTCTGCCTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR TCA 90 bp TATCGGGGTCGCCGAGGCTCCAGCTCATCAATCCTGAACCGAGTCATGTTCTTTAATGATGCCAGTCTCTaGCATCCAGCGAACATCTGT +
Preference number: 4 (lower is better)
Translates to: YRGRRGSSSSILNRVMFFNDASL*HPANIC
Trigger: ACAGATGTTCGCTGGATGTCAGAGACTGGCATCATT...AAAGAACATGACTCGGTTCAGGATTGATGAGCTGGAGCCTCGGCGACCCCGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532402.5
CDS-3UTR TCA 90 bp TCCAAGGCAGAAGAAAGAATATCTCTCAGCACTAATGCTCCCCTTCCCTCCCCCCAATGTCTAGCCAGATaGCATCACAGGGCAGGTTGT +
Preference number: 4 (lower is better)
Translates to: SKAEERISLSTNAPLPSPQCLAR*HHRAGC
Trigger: ACAACCTGCCCTGTGATGTCATCTGGCTAGACATTG...GGGGGAGGGAAGGGGAGCATTAGTGCTGAGAGATATTCTTTCTTCTGCCTTGGA
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR TCA 90 bp GTGCTCCAGTTAGAGCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATCTGGCTCTGGGTTTTTaGAGAAGCCACCCACATCCG +
Preference number: 4 (lower is better)
Translates to: VLQLEQQDVGGMKGKSWYLALGF*RSHPHP
Trigger: CGGATGTGGGTGGCTTCTTCAAAAACCCAGAGCCAG...ATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGCTCTAACTGGAGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR TCA 90 bp GTGCTCCAGTTAGAGCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATCCTTCCCGATGGGCCTaGTATAAGAGGGTGTACCAG +
Preference number: 4 (lower is better)
Translates to: VLQLEQQDVGGMKGKSWYPSRWA*YKRVYQ
Trigger: CTGGTACACCCTCTTATATCAGGCCCATCGGGAAGG...ATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGCTCTAACTGGAGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR TCA 90 bp GTGCTCCAGTTAGAGCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATAAGGTAGTCACATCCTaGGGGTACTGCACCCACAGG +
Preference number: 4 (lower is better)
Translates to: VLQLEQQDVGGMKGKSWYKVVTS*GYCTHR
Trigger: CCTGTGGGTGCAGTACCCTCAGGATGTGACTACCTT...ATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGCTCTAACTGGAGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR TCA 90 bp TCCAAGGCAGAAGAAAGAATATCTCTCAGCACTAATGCTCCCCTTCCCTCCCCCATCCTTCATACATTCTaGAGACCGCCGCACTCGCAT +
Preference number: 4 (lower is better)
Translates to: SKAEERISLSTNAPLPSPILHTF*RPPHSH
Trigger: ATGCGAGTGCGGCGGTCTTCAGAATGTATGAAGGAT...GGGGGAGGGAAGGGGAGCATTAGTGCTGAGAGATATTCTTTCTTCTGCCTTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR TCA 90 bp GAGATCACAAGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATGTGCAACAAAGAGAGTaGTGGGGTCATCCTTCATAC +
Preference number: 4 (lower is better)
Translates to: EITRGIWSPGSALSSCPNVQQRE*WGHPSY
Trigger: GTATGAAGGATGACCCCATCACTCTCTTTGTTGCAC...ATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCTTGTGATCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR TCA 90 bp TTAACTCCACACTGTTCTCATCACGACCAGAGACAGAAAGCCGGGCTATTGGTGGGCGAGTCTGATAGTTaGACGTGTGCCCATCATCCA +
Preference number: 4 (lower is better)
Translates to: LTPHCSHHDQRQKAGLLVGESDS*TCAHHP
Trigger: TGGATGATGGGCACACGTTCAACTATCAGACTCGCC...CACCAATAGCCCGGCTTTCTGTCTCTGGTCGTGATGAGAACAGTGTGGAGTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532402.5
CDS-3UTR TCA 90 bp GCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATCAATGGAGTGGGAGGGTGTTGCCAGAGAATaGGAATCGACGCAGCAGGAA +
Preference number: 4 (lower is better)
Translates to: ATGCWGNEGKELVSMEWEGVARE*ESTQQE
Trigger: TTCCTGCTGCGTCGATTCTCATTCTCTGGCAACACC...CTCCCACTCCATTGATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR TCA 90 bp GTGCTCCAGTTAGAGCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATTCCTTCAGGGTCTGCTaGGCTGGAGACAAGGGTGTT +
Preference number: 4 (lower is better)
Translates to: VLQLEQQDVGGMKGKSWYSFRVC*AGDKGV
Trigger: AACACCCTTGTCTCCAGCTCAGCAGACCCTGAAGGA...ATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGCTCTAACTGGAGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR TCA 90 bp GAGATCACAAGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATTTGGGTTATCGCAGGTaGATACTCCAATCAGATGCC +
Preference number: 4 (lower is better)
Translates to: EITRGIWSPGSALSSCPNLGYRR*ILQSDA
Trigger: GGCATCTGATTGGAGTATTCACCTGCGATAACCCAA...ATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCTTGTGATCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR TCA 90 bp GAGATCACAAGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATAGGATGTTGGGGGAATaGAGGGAAAGAGTTGGTATC +
Preference number: 4 (lower is better)
Translates to: EITRGIWSPGSALSSCPNRMLGE*RERVGI
Trigger: GATACCAACTCTTTCCCTTCATTCCCCCAACATCCT...ATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCTTGTGATCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR TCA 90 bp GTGCTCCAGTTAGAGCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATCTCAGCTGGGTCTTTTaGTCCTTGCGAGACCCTAGG +
Preference number: 4 (lower is better)
Translates to: VLQLEQQDVGGMKGKSWYLSWVF*SLRDPR
Trigger: CCTAGGGTCTCGCAAGGATCAAAAGACCCAGCTGAG...ATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGCTCTAACTGGAGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR GCA 90 bp CCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGAATCTGGGTCTTAGACTGCTTCTCTGTCGCTTaGAGAAAGAACTCTCTTCAC +
Preference number: 4 (lower is better)
Translates to: PGSALSSCPNVGRIWVLDCFSVA*RKNSLH
Trigger: GTGAAGAGAGTTCTTTCTGCAAGCGACAGAGAAGCA...GTCTAAGACCCAGATTCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000648273.1
CDS-3UTR GCA 90 bp GAGATCACAAGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATAAGGCGGAATGGCCGTaGTGTCAAGATGATCTTGTA +
Preference number: 4 (lower is better)
Translates to: EITRGIWSPGSALSSCPNKAEWP*CQDDLV
Trigger: TACAAGATCATCTTGACAGCACGGCCATTCCGCCTT...ATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCTTGTGATCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR GCA 90 bp GAAAGCCGGGCTATTGGTGGATCAGCCACCAAAACATCTGGTACACGGTATCGGAAGGCGGAATGGCCGTaGTGTCAAGATGATCTTGTA +
Preference number: 4 (lower is better)
Translates to: ESRAIGGSATKTSGTRYRKAEWP*CQDDLV
Trigger: TACAAGATCATCTTGACAGCACGGCCATTCCGCCTT...CCGATACCGTGTACCAGATGTTTTGGTGGCTGATCCACCAATAGCCCGGCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000526210.1
ENST00000529737.5
ENST00000532402.5
ENST00000534613.5
CDS-3UTR GCA 90 bp TTAACTCCACACTGTTCTCATCACGACCAGAGACAGAAAGCCGGGCTATTGGTGTGGCTCATCTTTCTCTaGCTTCCCCTGAGTCTCCTC +
Preference number: 4 (lower is better)
Translates to: LTPHCSHHDQRQKAGLLVWLIFL*LPLSLL
Trigger: GAGGAGACTCAGGGGAAGGCAGAGAAAGATGAGCCA...CACCAATAGCCCGGCTTTCTGTCTCTGGTCGTGATGAGAACAGTGTGGAGTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532402.5
ENST00000534613.5
CDS-3UTR GCA 90 bp GTGCTCCAGTTAGAGCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATGTCCAAGTGGGCATGTaGCCGGAAGAATGGCTGGTA +
Preference number: 4 (lower is better)
Translates to: VLQLEQQDVGGMKGKSWYVQVGM*PEEWLV
Trigger: TACCAGCCATTCTTCCGGGCACATGCCCACTTGGAC...ATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGCTCTAACTGGAGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR GCA 90 bp CCAAGGCAGAAGAAAGAATATCTCTCAGCACTAATGCTCCCCTTCCCTCCCCCTACCCTGAGGGCTAAGTaGAACAAAGAGAGTGATGGG +
Preference number: 4 (lower is better)
Translates to: PRQKKEYLSALMLPFPPPTLRAK*NKESDG
Trigger: CCCATCACTCTCTTTGTTGCACTTAGCCCTCAGGGT...AGGGGGAGGGAAGGGGAGCATTAGTGCTGAGAGATATTCTTTCTTCTGCCTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR GCA 90 bp CCAAGGCAGAAGAAAGAATATCTCTCAGCACTAATGCTCCCCTTCCCTCCCCCTTCAGCCCTCTCATCCTaGCCAAATGTTGGCAGAATC +
Preference number: 4 (lower is better)
Translates to: PRQKKEYLSALMLPFPPPSALSS*PNVGRI
Trigger: GATTCTGCCAACATTTGGGCAGGATGAGAGGGCTGA...AGGGGGAGGGAAGGGGAGCATTAGTGCTGAGAGATATTCTTTCTTCTGCCTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp GCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATCAATGGAGTGGGAGAGCCACCAAAACATCTaGTACACGGTATCGGGGTCG +
Preference number: 4 (lower is better)
Translates to: ATGCWGNEGKELVSMEWESHQNI*YTVSGS
Trigger: CGACCCCGATACCGTGTACCAGATGTTTTGGTGGCT...CTCCCACTCCATTGATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp GGCCCTCTGATGCTCAAACTCCAAGAGTCCTCGGGCATTGACACTAAGCAAAAGAAGCCGGGCTATTGGTaGATCAGCCACCAAAACATC +
Preference number: 4 (lower is better)
Translates to: GPLMLKLQESSGIDTKQKKPGYW*ISHQNI
Trigger: GATGTTTTGGTGGCTGATCCACCAATAGCCCGGCTT...CTTTTGCTTAGTGTCAATGCCCGAGGACTCTTGGAGTTTGAGCATCAGAGGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526210.1
ENST00000529737.5
ENST00000532402.5
ENST00000534613.5
CDS-3UTR CCA 90 bp CCAGAGACAGAAAGCCGGGCTATTGGTGGATCAGCCACCAAAACATCTGGTACAAAGCCGGGCTATTGGTaGATCAGCCACCAAAACATC +
Preference number: 4 (lower is better)
Translates to: PETESRAIGGSATKTSGTKPGYW*ISHQNI
Trigger: GATGTTTTGGTGGCTGATCCACCAATAGCCCGGCTT...TGTACCAGATGTTTTGGTGGCTGATCCACCAATAGCCCGGCTTTCTGTCTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526210.1
ENST00000529737.5
ENST00000532402.5
ENST00000534613.5
CDS-3UTR CCA 90 bp ACACTAAGCAAAAGACTTCGGTCCTCTAGTAGGTCAAGGCGGAATGGCCGTGCTAAGCCGGGCTATTGGTaGATCAGCCACCAAAACATC +
Preference number: 4 (lower is better)
Translates to: TLSKRLRSSSRSRRNGRAKPGYW*ISHQNI
Trigger: GATGTTTTGGTGGCTGATCCACCAATAGCCCGGCTT...AGCACGGCCATTCCGCCTTGACCTACTAGAGGACCGAAGTCTTTTGCTTAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526210.1
ENST00000529737.5
ENST00000532402.5
ENST00000534613.5
CDS-3UTR CCA 90 bp TCCAAGGCAGAAGAAAGAATATCTCTCAGCACTAATGCTCCCCTTCCCTCCCCCAGAAAGCCGGGCTATTaGTGGATCAGCCACCAAAAC +
Preference number: 4 (lower is better)
Translates to: SKAEERISLSTNAPLPSPRKPGY*WISHQN
Trigger: GTTTTGGTGGCTGATCCACCAATAGCCCGGCTTTCT...GGGGGAGGGAAGGGGAGCATTAGTGCTGAGAGATATTCTTTCTTCTGCCTTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp CCAAGGCAGAAGAAAGAATATCTCTCAGCACTAATGCTCCCCTTCCCTCCCCCTAGGGTCCCTCAGCCATaGTTAACTCCACACTGTTCT +
Preference number: 4 (lower is better)
Translates to: PRQKKEYLSALMLPFPPPRVPQP*LTPHCS
Trigger: AGAACAGTGTGGAGTTAACCATGGCTGAGGGACCCT...AGGGGGAGGGAAGGGGAGCATTAGTGCTGAGAGATATTCTTTCTTCTGCCTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp GCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATCAATGGAGTGGGAGGACATGCTCCATGCCTaGCAGAGAGAAGTCCAAACC +
Preference number: 4 (lower is better)
Translates to: ATGCWGNEGKELVSMEWEDMLHA*QREVQT
Trigger: GGTTTGGACTTCTCTCTGCCAGGCATGGAGCATGTC...CTCCCACTCCATTGATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp GTGCTCCAGTTAGAGCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATGGAAAACATCAGAGATaGAGGGCCCCAGCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: VLQLEQQDVGGMKGKSWYGKHQR*RAPAAG
Trigger: TCCTGCTGCTGGGGCCCTCCATCTCTGATGTTTTCC...ATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGCTCTAACTGGAGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp AGGGGCCCTCTGATGCTCAAACTCCAAGAGTCCTCGGGCATTGACACTAAGCAATCCAGACAAAGAGGTTaGGAGCTGAGCCCTCATAAT +
Preference number: 4 (lower is better)
Translates to: RGPLMLKLQESSGIDTKQSRQRG*ELSPHN
Trigger: ATTATGAGGGCTCAGCTCCCAACCTCTTTGTCTGGA...TTGCTTAGTGTCAATGCCCGAGGACTCTTGGAGTTTGAGCATCAGAGGGCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532402.5
CDS-3UTR CCA 90 bp CCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGAATCTGGGTCTTAGACATAGAGATCTTCAAATaGTCCCACTCGGCAGTGTTG +
Preference number: 4 (lower is better)
Translates to: PGSALSSCPNVGRIWVLDIEIFK*SHSAVL
Trigger: CAACACTGCCGAGTGGGACCATTTGAAGATCTCTAT...GTCTAAGACCCAGATTCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp CACAGACATGGGGCCATACGGCTTGCTGTCAGAGTGAGTTTTGAATGTCTCCTCAAGCAGCTCTGGCTCTaGGTTTTTGAAGAAGCCACC +
Preference number: 4 (lower is better)
Translates to: HRHGAIRLAVRVSFECLLKQLWL*VFEEAT
Trigger: GGTGGCTTCTTCAAAAACCCAGAGCCAGAGCTGCTT...GAGGAGACATTCAAAACTCACTCTGACAGCAAGCCGTATGGCCCCATGTCTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000532402.5
CDS-3UTR CCA 90 bp CCAAGGCAGAAGAAAGAATATCTCTCAGCACTAATGCTCCCCTTCCCTCCCCCTAAGCAGCTCTGGCTCTaGGTTTTTGAAGAAGCCACC +
Preference number: 4 (lower is better)
Translates to: PRQKKEYLSALMLPFPPPKQLWL*VFEEAT
Trigger: GGTGGCTTCTTCAAAAACCCAGAGCCAGAGCTGCTT...AGGGGGAGGGAAGGGGAGCATTAGTGCTGAGAGATATTCTTTCTTCTGCCTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp GAGATCACAAGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATCCGCTCAATCCAGATTaGTGTCTCAAAGTGTCCTTC +
Preference number: 4 (lower is better)
Translates to: EITRGIWSPGSALSSCPNPLNPD*CLKVSF
Trigger: GAAGGACACTTTGAGACACCAATCTGGATTGAGCGG...ATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCTTGTGATCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp TCCAAGGCAGAAGAAAGAATATCTCTCAGCACTAATGCTCCCCTTCCCTCCCCCGAGTACCACAGCTGCTaGCTTTCCAGCCCCTATTAT +
Preference number: 4 (lower is better)
Translates to: SKAEERISLSTNAPLPSPEYHSC*LSSPYY
Trigger: ATAATAGGGGCTGGAAAGCCAGCAGCTGTGGTACTC...GGGGGAGGGAAGGGGAGCATTAGTGCTGAGAGATATTCTTTCTTCTGCCTTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp CCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGAATCTGGGTCTTAGACATCCTGCCCAAATGTTaGCAGAATCTGGGTCTTAGA +
Preference number: 4 (lower is better)
Translates to: PGSALSSCPNVGRIWVLDILPKC*QNLGLR
Trigger: TCTAAGACCCAGATTCTGCCAACATTTGGGCAGGAT...GTCTAAGACCCAGATTCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp AAGCCGGGCTATTGGTGGATCAGCCACCAAAACATCTGGTACACGGTATCGGGGATCCTGCCCAAATGTTaGCAGAATCTGGGTCTTAGA +
Preference number: 4 (lower is better)
Translates to: KPGYWWISHQNIWYTVSGILPKC*QNLGLR
Trigger: TCTAAGACCCAGATTCTGCCAACATTTGGGCAGGAT...CCCCGATACCGTGTACCAGATGTTTTGGTGGCTGATCCACCAATAGCCCGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532402.5
3UTR CAA 72 bp GTGCCAGGAGCACAGGCACAGACCCATACAAGGCCATaGGGTTGTACAGCTCATACTGGAACACATCCAAAT +
Preference number: 4 (lower is better)
Translates to: VPGAQAQTHTRP*GCTAHTGTHPN
Trigger: ATTTGGATGTGTTCCAGTATGAGCTGTACAACCCAATGGCCTTGTATGGGTCTGTGCCTGTGCTCCTGGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532402.5
CDS-3UTR TCA 90 bp GTAAGCACCCATCTGGTACCAGCGCACAAGCAGCTCTGGCTCTGGGTTTTTGAACCAGCTCATCAATCCTaGACCGAGTCATGTTCTTTT +
Preference number: 4 (lower is better)
Translates to: VSTHLVPAHKQLWLWVFEPAHQS*TESCSF
Trigger: AAAAGAACATGACTCGGTTCAGGATTGATGAGCTGG...TTCAAAAACCCAGAGCCAGAGCTGCTTGTGCGCTGGTACCAGATGGGTGCTTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532402.5
CDS-3UTR TCA 90 bp TGGTTAACTCCACACTGTTCTCATCACGACCAGAGACAGAAAGCCGGGCTATTGGGCTTGCTGTCAGAGTaGGTTTTGAATGTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: WLTPHCSHHDQRQKAGLLGLLSE*VLNVSS
Trigger: GGAGGAGACATTCAAAACTCACTCTGACAGCAAGCC...CAATAGCCCGGCTTTCTGTCTCTGGTCGTGATGAGAACAGTGTGGAGTTAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532402.5
ENST00000534613.5
CDS-3UTR TCA 90 bp TCCAAGGCAGAAGAAAGAATATCTCTCAGCACTAATGCTCCCCTTCCCTCCCCCAATGATGCCAGTCTCTaGCATCCAGCGAACATCTGT +
Preference number: 4 (lower is better)
Translates to: SKAEERISLSTNAPLPSPNDASL*HPANIC
Trigger: ACAGATGTTCGCTGGATGTCAGAGACTGGCATCATT...GGGGGAGGGAAGGGGAGCATTAGTGCTGAGAGATATTCTTTCTTCTGCCTTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR TCA 90 bp GCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATCAATGGAGTGGGAGCAATGTCTAGCCAGATaGCATCACAGGGCAGGTTGT +
Preference number: 4 (lower is better)
Translates to: ATGCWGNEGKELVSMEWEQCLAR*HHRAGC
Trigger: ACAACCTGCCCTGTGATGTCATCTGGCTAGACATTG...CTCCCACTCCATTGATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR TCA 90 bp GTGCTCCAGTTAGAGCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATATGGGCTCCAGAGTCTaGTACAGGGTGAACCAGCAA +
Preference number: 4 (lower is better)
Translates to: VLQLEQQDVGGMKGKSWYMGSRV*YRVNQQ
Trigger: TTGCTGGTTCACCCTGTATCAGACTCTGGAGCCCAT...ATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGCTCTAACTGGAGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR TCA 90 bp TCCAAGGCAGAAGAAAGAATATCTCTCAGCACTAATGCTCCCCTTCCCTCCCCCGTGCAACAAAGAGAGTaGTGGGGTCATCCTTCATAC +
Preference number: 4 (lower is better)
Translates to: SKAEERISLSTNAPLPSPVQQRE*WGHPSY
Trigger: GTATGAAGGATGACCCCATCACTCTCTTTGTTGCAC...GGGGGAGGGAAGGGGAGCATTAGTGCTGAGAGATATTCTTTCTTCTGCCTTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR TCA 90 bp GTGCTCCAGTTAGAGCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATAATCAGATGCCACATTaGTGCCAGGCTTGCGCAGGA +
Preference number: 4 (lower is better)
Translates to: VLQLEQQDVGGMKGKSWYNQMPH*CQACAG
Trigger: TCCTGCGCAAGCCTGGCATCAATGTGGCATCTGATT...ATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGCTCTAACTGGAGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR TCA 90 bp TCCAAGGCAGAAGAAAGAATATCTCTCAGCACTAATGCTCCCCTTCCCTCCCCCTTGGGTTATCGCAGGTaGATACTCCAATCAGATGCC +
Preference number: 4 (lower is better)
Translates to: SKAEERISLSTNAPLPSPLGYRR*ILQSDA
Trigger: GGCATCTGATTGGAGTATTCACCTGCGATAACCCAA...GGGGGAGGGAAGGGGAGCATTAGTGCTGAGAGATATTCTTTCTTCTGCCTTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR TCA 90 bp CCAAGGCAGAAGAAAGAATATCTCTCAGCACTAATGCTCCCCTTCCCTCCCCCTAGGATGTTGGGGGAATaGAGGGAAAGAGTTGGTATC +
Preference number: 4 (lower is better)
Translates to: PRQKKEYLSALMLPFPPPRMLGE*RERVGI
Trigger: GATACCAACTCTTTCCCTTCATTCCCCCAACATCCT...AGGGGGAGGGAAGGGGAGCATTAGTGCTGAGAGATATTCTTTCTTCTGCCTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR GCA 90 bp GAGATCACAAGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATTGCTTCTCTGTCGCTTaGAGAAAGAACTCTCTTCAC +
Preference number: 4 (lower is better)
Translates to: EITRGIWSPGSALSSCPNCFSVA*RKNSLH
Trigger: GTGAAGAGAGTTCTTTCTGCAAGCGACAGAGAAGCA...ATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCTTGTGATCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000648273.1
CDS-3UTR GCA 90 bp TCCAAGGCAGAAGAAAGAATATCTCTCAGCACTAATGCTCCCCTTCCCTCCCCCAAGGCGGAATGGCCGTaGTGTCAAGATGATCTTGTA +
Preference number: 4 (lower is better)
Translates to: SKAEERISLSTNAPLPSPKAEWP*CQDDLV
Trigger: TACAAGATCATCTTGACAGCACGGCCATTCCGCCTT...GGGGGAGGGAAGGGGAGCATTAGTGCTGAGAGATATTCTTTCTTCTGCCTTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR GCA 90 bp CTATTGGTGGATCAGCCACCAAAACATCTGGTACACGGTATCGGGGTCGCCGAGGGGTCTTTTGATCCTTaGCTAGAGAAAAGGTTCTTG +
Preference number: 4 (lower is better)
Translates to: LLVDQPPKHLVHGIGVAEGSFDP*LEKRFL
Trigger: CAAGAACCTTTTCTCTAGGCAAGGATCAAAAGACCC...CTCGGCGACCCCGATACCGTGTACCAGATGTTTTGGTGGCTGATCCACCAATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000534613.5
CDS-3UTR GCA 90 bp GTGCTCCAGTTAGAGCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATCAGCCTCAGGTTGTCTaGATGCTCAGGGATCCCATA +
Preference number: 4 (lower is better)
Translates to: VLQLEQQDVGGMKGKSWYQPQVV*MLRDPI
Trigger: TATGGGATCCCTGAGCATGCAGACAACCTGAGGCTG...ATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGCTCTAACTGGAGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR GCA 90 bp TCCAAGGCAGAAGAAAGAATATCTCTCAGCACTAATGCTCCCCTTCCCTCCCCCATCAACCCAGGTCTCTaGAGCATTGAGCCAGAAGAT +
Preference number: 4 (lower is better)
Translates to: SKAEERISLSTNAPLPSPINPGL*SIEPED
Trigger: ATCTTCTGGCTCAATGCTGCAGAGACCTGGGTTGAT...GGGGGAGGGAAGGGGAGCATTAGTGCTGAGAGATATTCTTTCTTCTGCCTTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR GCA 90 bp CCAAGGCAGAAGAAAGAATATCTCTCAGCACTAATGCTCCCCTTCCCTCCCCCTATCAACCCAGGTCTCTaGAGCATTGAGCCAGAAGAT +
Preference number: 4 (lower is better)
Translates to: PRQKKEYLSALMLPFPPPINPGL*SIEPED
Trigger: ATCTTCTGGCTCAATGCTGCAGAGACCTGGGTTGAT...AGGGGGAGGGAAGGGGAGCATTAGTGCTGAGAGATATTCTTTCTTCTGCCTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR GCA 90 bp CCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGAATCTGGGTCTTAGACGTGAGACTAGCATATTaGCGGAAAACATCAGAGATG +
Preference number: 4 (lower is better)
Translates to: PGSALSSCPNVGRIWVLDVRLAY*RKTSEM
Trigger: CATCTCTGATGTTTTCCGGCAATATGCTAGTCTCAC...GTCTAAGACCCAGATTCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR GCA 90 bp TCGGGGTCGCCGAGGCTCCAGCTCATCAATCCTGAACCGAGTCATGTTCTTTTGAATACTCCAATCAGATaGCACATTGATGCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: SGSPRLQLINPEPSHVLLNTPIR*HIDARL
Trigger: AAGCCTGGCATCAATGTGGCATCTGATTGGAGTATT...CAAAAGAACATGACTCGGTTCAGGATTGATGAGCTGGAGCCTCGGCGACCCCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532402.5
CDS-3UTR GCA 90 bp GAGATCACAAGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATAGCACCAGCAACACTTaGAGAAAGAACTCTCTTCAC +
Preference number: 4 (lower is better)
Translates to: EITRGIWSPGSALSSCPNSTSNT*RKNSLH
Trigger: GTGAAGAGAGTTCTTTCTGCAAGTGTTGCTGGTGCT...ATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCTTGTGATCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532402.5
ENST00000540933.5
CDS-3UTR CCA 90 bp GCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATCAATGGAGTGGGAGACCTCATGGATCAGATaGACCGTGAGGGAATCAGGA +
Preference number: 4 (lower is better)
Translates to: ATGCWGNEGKELVSMEWETSWIR*TVRESG
Trigger: TCCTGATTCCCTCACGGTCCATCTGATCCATGAGGT...CTCCCACTCCATTGATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000648273.1
CDS-3UTR CCA 90 bp GCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATCAATGGAGTGGGAGAGAAAGCCGGGCTATTaGTGGATCAGCCACCAAAAC +
Preference number: 4 (lower is better)
Translates to: ATGCWGNEGKELVSMEWERKPGY*WISHQN
Trigger: GTTTTGGTGGCTGATCCACCAATAGCCCGGCTTTCT...CTCCCACTCCATTGATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp CCAAGGCAGAAGAAAGAATATCTCTCAGCACTAATGCTCCCCTTCCCTCCCCCTCCCATACAAGGCCATTaGGTTGTACAGCTCATACTG +
Preference number: 4 (lower is better)
Translates to: PRQKKEYLSALMLPFPPPPIQGH*VVQLIL
Trigger: CAGTATGAGCTGTACAACCCAATGGCCTTGTATGGG...AGGGGGAGGGAAGGGGAGCATTAGTGCTGAGAGATATTCTTTCTTCTGCCTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp AGAGACAGAAAGCCGGGCTATTGGTGGATCAGCCACCAAAACATCTGGTACACGCCCATACAAGGCCATTaGGTTGTACAGCTCATACTG +
Preference number: 4 (lower is better)
Translates to: RDRKPGYWWISHQNIWYTPIQGH*VVQLIL
Trigger: CAGTATGAGCTGTACAACCCAATGGCCTTGTATGGG...CGTGTACCAGATGTTTTGGTGGCTGATCCACCAATAGCCCGGCTTTCTGTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532402.5
CDS-3UTR CCA 90 bp CCAAGGCAGAAGAAAGAATATCTCTCAGCACTAATGCTCCCCTTCCCTCCCCCTTCTTCCCGGCAGTGTTaGAAGATATATCAACCCAGG +
Preference number: 4 (lower is better)
Translates to: PRQKKEYLSALMLPFPPPSSRQC*KIYQPR
Trigger: CCTGGGTTGATATATCTTCCAACACTGCCGGGAAGA...AGGGGGAGGGAAGGGGAGCATTAGTGCTGAGAGATATTCTTTCTTCTGCCTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp TCCAAGGCAGAAGAAAGAATATCTCTCAGCACTAATGCTCCCCTTCCCTCCCCCTCTTCCCGGCAGTGTTaGAAGATATATCAACCCAGG +
Preference number: 4 (lower is better)
Translates to: SKAEERISLSTNAPLPSPSSRQC*KIYQPR
Trigger: CCTGGGTTGATATATCTTCCAACACTGCCGGGAAGA...GGGGGAGGGAAGGGGAGCATTAGTGCTGAGAGATATTCTTTCTTCTGCCTTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp GCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATCAATGGAGTGGGAGAAGCAGCTCTGGCTCTaGGTTTTTGAAGAAGCCACC +
Preference number: 4 (lower is better)
Translates to: ATGCWGNEGKELVSMEWEKQLWL*VFEEAT
Trigger: GGTGGCTTCTTCAAAAACCCAGAGCCAGAGCTGCTT...CTCCCACTCCATTGATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp GCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATCAATGGAGTGGGAGGCGCACAAGCAGCTCTaGCTCTGGGTTTTTGAAGAA +
Preference number: 4 (lower is better)
Translates to: ATGCWGNEGKELVSMEWEAHKQL*LWVFEE
Trigger: TTCTTCAAAAACCCAGAGCCAGAGCTGCTTGTGCGC...CTCCCACTCCATTGATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp GCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATCAATGGAGTGGGAGATTGTCCCTCCACGCTaGAACACAGGGATACTGCTT +
Preference number: 4 (lower is better)
Translates to: ATGCWGNEGKELVSMEWEIVPPR*NTGILL
Trigger: AAGCAGTATCCCTGTGTTCCAGCGTGGAGGGACAAT...CTCCCACTCCATTGATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp TCCAAGGCAGAAGAAAGAATATCTCTCAGCACTAATGCTCCCCTTCCCTCCCCCCCGCTCAATCCAGATTaGTGTCTCAAAGTGTCCTTC +
Preference number: 4 (lower is better)
Translates to: SKAEERISLSTNAPLPSPPLNPD*CLKVSF
Trigger: GAAGGACACTTTGAGACACCAATCTGGATTGAGCGG...GGGGGAGGGAAGGGGAGCATTAGTGCTGAGAGATATTCTTTCTTCTGCCTTGGA
50% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp GCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATCAATGGAGTGGGAGGAGTACCACAGCTGCTaGCTTTCCAGCCCCTATTAT +
Preference number: 4 (lower is better)
Translates to: ATGCWGNEGKELVSMEWEEYHSC*LSSPYY
Trigger: ATAATAGGGGCTGGAAAGCCAGCAGCTGTGGTACTC...CTCCCACTCCATTGATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp GTGCTCCAGTTAGAGCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATGGACAGGCGGCTTTCTaGAGATCCTTTTGTCTGGAG +
Preference number: 4 (lower is better)
Translates to: VLQLEQQDVGGMKGKSWYGQAAF*RSFCLE
Trigger: CTCCAGACAAAAGGATCTCCAGAAAGCCGCCTGTCC...ATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGCTCTAACTGGAGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp TCCAAGGCAGAAGAAAGAATATCTCTCAGCACTAATGCTCCCCTTCCCTCCCCCACCCAGAACATCCCTTaGGTTATCGCAGGTGAATAC +
Preference number: 4 (lower is better)
Translates to: SKAEERISLSTNAPLPSPTQNIP*VIAGEY
Trigger: GTATTCACCTGCGATAACCCAAGGGATGTTCTGGGT...GGGGGAGGGAAGGGGAGCATTAGTGCTGAGAGATATTCTTTCTTCTGCCTTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp CAGAAAGCCGGGCTATTGGTGGATCAGCCACCAAAACATCTGGTACACGGTATCACCCAGAACATCCCTTaGGTTATCGCAGGTGAATAC +
Preference number: 4 (lower is better)
Translates to: QKAGLLVDQPPKHLVHGITQNIP*VIAGEY
Trigger: GTATTCACCTGCGATAACCCAAGGGATGTTCTGGGT...GATACCGTGTACCAGATGTTTTGGTGGCTGATCCACCAATAGCCCGGCTTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532402.5
CDS-3UTR CCA 90 bp AGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGAATGAAGGGAAAGAGTTaGTATCAATGGAGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: RGIWSPGSALSSCPNVGRMKGKS*YQWSGR
Trigger: TCTCCCACTCCATTGATACCAACTCTTTCCCTTCAT...TCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp CCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGAATCTGGGTCTTAGACATGAAGGGAAAGAGTTaGTATCAATGGAGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: PGSALSSCPNVGRIWVLDMKGKS*YQWSGR
Trigger: TCTCCCACTCCATTGATACCAACTCTTTCCCTTCAT...GTCTAAGACCCAGATTCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp CCAAGGCAGAAGAAAGAATATCTCTCAGCACTAATGCTCCCCTTCCCTCCCCCTAGAGCAACAGGATGTTaGGGGAATGAAGGGAAAGAG +
Preference number: 4 (lower is better)
Translates to: PRQKKEYLSALMLPFPPPRATGC*GNEGKE
Trigger: CTCTTTCCCTTCATTCCCCCAACATCCTGTTGCTCT...AGGGGGAGGGAAGGGGAGCATTAGTGCTGAGAGATATTCTTTCTTCTGCCTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR TCA 90 bp ACACTAAGCAAAAGACTTCGGTCCTCTAGTAGGTCAAGGCGGAATGGCCGTGCTCCAGCTCATCAATCCTaGACCGAGTCATGTTCTTTT +
Preference number: 4 (lower is better)
Translates to: TLSKRLRSSSRSRRNGRAPAHQS*TESCSF
Trigger: AAAAGAACATGACTCGGTTCAGGATTGATGAGCTGG...AGCACGGCCATTCCGCCTTGACCTACTAGAGGACCGAAGTCTTTTGCTTAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000526210.1
ENST00000529737.5
ENST00000532402.5
ENST00000534613.5
CDS-3UTR TCA 90 bp GTGCTCCAGTTAGAGCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATTGTCAGAGTGAGTTTTaGATGTCTCCTCCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: VLQLEQQDVGGMKGKSWYCQSEF*MSPPRL
Trigger: GAGCCTGGGAGGAGACATTCAAAACTCACTCTGACA...ATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGCTCTAACTGGAGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR TCA 90 bp GAGATCACAAGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATATTATATCATTGTGCTaGGATGGTAACAGCCATGGC +
Preference number: 4 (lower is better)
Translates to: EITRGIWSPGSALSSCPNIISLC*DGNSHG
Trigger: GCCATGGCTGTTACCATCTCAGCACAATGATATAAT...ATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCTTGTGATCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR TCA 90 bp GTGCTCCAGTTAGAGCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATATCCTTCATACATTCTaGAGACCGCCGCACTCGCAT +
Preference number: 4 (lower is better)
Translates to: VLQLEQQDVGGMKGKSWYILHTF*RPPHSH
Trigger: ATGCGAGTGCGGCGGTCTTCAGAATGTATGAAGGAT...ATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGCTCTAACTGGAGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR GCA 90 bp GAGATCACAAGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATGGGTCTTTTGATCCTTaGCTAGAGAAAAGGTTCTTG +
Preference number: 4 (lower is better)
Translates to: EITRGIWSPGSALSSCPNGSFDP*LEKRFL
Trigger: CAAGAACCTTTTCTCTAGGCAAGGATCAAAAGACCC...ATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCTTGTGATCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000346178.8
CDS-3UTR GCA 90 bp GTGCTCCAGTTAGAGCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATCATAGACATGCTCCATaGCTGGCAGAGAGAAGTCCA +
Preference number: 4 (lower is better)
Translates to: VLQLEQQDVGGMKGKSWYHRHAP*LAERSP
Trigger: TGGACTTCTCTCTGCCAGGCATGGAGCATGTCTATG...ATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGCTCTAACTGGAGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR GCA 90 bp GTGCTCCAGTTAGAGCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATACCCTGAGGGCTAAGTaGAACAAAGAGAGTGATGGG +
Preference number: 4 (lower is better)
Translates to: VLQLEQQDVGGMKGKSWYTLRAK*NKESDG
Trigger: CCCATCACTCTCTTTGTTGCACTTAGCCCTCAGGGT...ATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGCTCTAACTGGAGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR GCA 90 bp GAGATCACAAGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATAATACTCCAATCAGATaGCACATTGATGCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: EITRGIWSPGSALSSCPNNTPIR*HIDARL
Trigger: AAGCCTGGCATCAATGTGGCATCTGATTGGAGTATT...ATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCTTGTGATCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp GTGCTCCAGTTAGAGCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATACCTCATGGATCAGATaGACCGTGAGGGAATCAGGA +
Preference number: 4 (lower is better)
Translates to: VLQLEQQDVGGMKGKSWYTSWIR*TVRESG
Trigger: TCCTGATTCCCTCACGGTCCATCTGATCCATGAGGT...ATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGCTCTAACTGGAGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000648273.1
CDS-3UTR CCA 90 bp GTGCTCCAGTTAGAGCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATAAGCCGGGCTATTGGTaGATCAGCCACCAAAACATC +
Preference number: 4 (lower is better)
Translates to: VLQLEQQDVGGMKGKSWYKPGYW*ISHQNI
Trigger: GATGTTTTGGTGGCTGATCCACCAATAGCCCGGCTT...ATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGCTCTAACTGGAGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp GTGCTCCAGTTAGAGCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATAGGGTCCCTCAGCCATaGTTAACTCCACACTGTTCT +
Preference number: 4 (lower is better)
Translates to: VLQLEQQDVGGMKGKSWYRVPQP*LTPHCS
Trigger: AGAACAGTGTGGAGTTAACCATGGCTGAGGGACCCT...ATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGCTCTAACTGGAGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp GCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATCAATGGAGTGGGAGCCCATACAAGGCCATTaGGTTGTACAGCTCATACTG +
Preference number: 4 (lower is better)
Translates to: ATGCWGNEGKELVSMEWEPIQGH*VVQLIL
Trigger: CAGTATGAGCTGTACAACCCAATGGCCTTGTATGGG...CTCCCACTCCATTGATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp GCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATCAATGGAGTGGGAGTCCAGACAAAGAGGTTaGGAGCTGAGCCCTCATAAT +
Preference number: 4 (lower is better)
Translates to: ATGCWGNEGKELVSMEWESRQRG*ELSPHN
Trigger: ATTATGAGGGCTCAGCTCCCAACCTCTTTGTCTGGA...CTCCCACTCCATTGATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp CACCAAAACATCTGGTACACGGTATCGGGGTCGCCGAGGCTCCAGCTCATCAATACCATTGAACACAGATaGTTCGTTCATGTCATTCCA +
Preference number: 4 (lower is better)
Translates to: HQNIWYTVSGSPRLQLINTIEHR*FVHVIP
Trigger: TGGAATGACATGAACGAACCATCTGTGTTCAATGGT...ATTGATGAGCTGGAGCCTCGGCGACCCCGATACCGTGTACCAGATGTTTTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532402.5
CDS-3UTR CCA 90 bp AGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGAACCATTGAACACAGATaGTTCGTTCATGTCATTCCA +
Preference number: 4 (lower is better)
Translates to: RGIWSPGSALSSCPNVGRTIEHR*FVHVIP
Trigger: TGGAATGACATGAACGAACCATCTGTGTTCAATGGT...TCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp TCCAAGGCAGAAGAAAGAATATCTCTCAGCACTAATGCTCCCCTTCCCTCCCCCATAGAGATCTTCAAATaGTCCCACTCGGCAGTGTTG +
Preference number: 4 (lower is better)
Translates to: SKAEERISLSTNAPLPSPIEIFK*SHSAVL
Trigger: CAACACTGCCGAGTGGGACCATTTGAAGATCTCTAT...GGGGGAGGGAAGGGGAGCATTAGTGCTGAGAGATATTCTTTCTTCTGCCTTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp GCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATCAATGGAGTGGGAGACCCAGAACATCCCTTaGGTTATCGCAGGTGAATAC +
Preference number: 4 (lower is better)
Translates to: ATGCWGNEGKELVSMEWETQNIP*VIAGEY
Trigger: GTATTCACCTGCGATAACCCAAGGGATGTTCTGGGT...CTCCCACTCCATTGATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR TCA 90 bp GCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATCAATGGAGTGGGAGCCAGCTCATCAATCCTaGACCGAGTCATGTTCTTTT +
Preference number: 4 (lower is better)
Translates to: ATGCWGNEGKELVSMEWEPAHQS*TESCSF
Trigger: AAAAGAACATGACTCGGTTCAGGATTGATGAGCTGG...CTCCCACTCCATTGATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR TCA 90 bp GTGCTCCAGTTAGAGCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATAATGATGCCAGTCTCTaGCATCCAGCGAACATCTGT +
Preference number: 4 (lower is better)
Translates to: VLQLEQQDVGGMKGKSWYNDASL*HPANIC
Trigger: ACAGATGTTCGCTGGATGTCAGAGACTGGCATCATT...ATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGCTCTAACTGGAGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR TCA 90 bp TCCAAGGCAGAAGAAAGAATATCTCTCAGCACTAATGCTCCCCTTCCCTCCCCCATTATATCATTGTGCTaGGATGGTAACAGCCATGGC +
Preference number: 4 (lower is better)
Translates to: SKAEERISLSTNAPLPSPIISLC*DGNSHG
Trigger: GCCATGGCTGTTACCATCTCAGCACAATGATATAAT...GGGGGAGGGAAGGGGAGCATTAGTGCTGAGAGATATTCTTTCTTCTGCCTTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR TCA 90 bp GTGCTCCAGTTAGAGCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATGTGCAACAAAGAGAGTaGTGGGGTCATCCTTCATAC +
Preference number: 4 (lower is better)
Translates to: VLQLEQQDVGGMKGKSWYVQQRE*WGHPSY
Trigger: GTATGAAGGATGACCCCATCACTCTCTTTGTTGCAC...ATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGCTCTAACTGGAGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR TCA 90 bp GTGCTCCAGTTAGAGCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATAGGATGTTGGGGGAATaGAGGGAAAGAGTTGGTATC +
Preference number: 4 (lower is better)
Translates to: VLQLEQQDVGGMKGKSWYRMLGE*RERVGI
Trigger: GATACCAACTCTTTCCCTTCATTCCCCCAACATCCT...ATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGCTCTAACTGGAGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR GCA 90 bp GTGCTCCAGTTAGAGCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATATCAACCCAGGTCTCTaGAGCATTGAGCCAGAAGAT +
Preference number: 4 (lower is better)
Translates to: VLQLEQQDVGGMKGKSWYINPGL*SIEPED
Trigger: ATCTTCTGGCTCAATGCTGCAGAGACCTGGGTTGAT...ATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGCTCTAACTGGAGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR GCA 90 bp CCAAGGCAGAAGAAAGAATATCTCTCAGCACTAATGCTCCCCTTCCCTCCCCCTGTGAGACTAGCATATTaGCGGAAAACATCAGAGATG +
Preference number: 4 (lower is better)
Translates to: PRQKKEYLSALMLPFPPPVRLAY*RKTSEM
Trigger: CATCTCTGATGTTTTCCGGCAATATGCTAGTCTCAC...AGGGGGAGGGAAGGGGAGCATTAGTGCTGAGAGATATTCTTTCTTCTGCCTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR GCA 90 bp TCCAAGGCAGAAGAAAGAATATCTCTCAGCACTAATGCTCCCCTTCCCTCCCCCAATACTCCAATCAGATaGCACATTGATGCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: SKAEERISLSTNAPLPSPNTPIR*HIDARL
Trigger: AAGCCTGGCATCAATGTGGCATCTGATTGGAGTATT...GGGGGAGGGAAGGGGAGCATTAGTGCTGAGAGATATTCTTTCTTCTGCCTTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR GCA 90 bp CCAAGGCAGAAGAAAGAATATCTCTCAGCACTAATGCTCCCCTTCCCTCCCCCTAATACTCCAATCAGATaGCACATTGATGCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: PRQKKEYLSALMLPFPPPNTPIR*HIDARL
Trigger: AAGCCTGGCATCAATGTGGCATCTGATTGGAGTATT...AGGGGGAGGGAAGGGGAGCATTAGTGCTGAGAGATATTCTTTCTTCTGCCTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp GTGCTCCAGTTAGAGCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATTCTTCCCGGCAGTGTTaGAAGATATATCAACCCAGG +
Preference number: 4 (lower is better)
Translates to: VLQLEQQDVGGMKGKSWYSSRQC*KIYQPR
Trigger: CCTGGGTTGATATATCTTCCAACACTGCCGGGAAGA...ATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGCTCTAACTGGAGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp GTGCTCCAGTTAGAGCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATTCCAGACAAAGAGGTTaGGAGCTGAGCCCTCATAAT +
Preference number: 4 (lower is better)
Translates to: VLQLEQQDVGGMKGKSWYSRQRG*ELSPHN
Trigger: ATTATGAGGGCTCAGCTCCCAACCTCTTTGTCTGGA...ATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGCTCTAACTGGAGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp GTGCTCCAGTTAGAGCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATCCGCTCAATCCAGATTaGTGTCTCAAAGTGTCCTTC +
Preference number: 4 (lower is better)
Translates to: VLQLEQQDVGGMKGKSWYPLNPD*CLKVSF
Trigger: GAAGGACACTTTGAGACACCAATCTGGATTGAGCGG...ATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGCTCTAACTGGAGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp GCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATCAATGGAGTGGGAGATCCTGCCCAAATGTTaGCAGAATCTGGGTCTTAGA +
Preference number: 4 (lower is better)
Translates to: ATGCWGNEGKELVSMEWEILPKC*QNLGLR
Trigger: TCTAAGACCCAGATTCTGCCAACATTTGGGCAGGAT...CTCCCACTCCATTGATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp CCAAGGCAGAAGAAAGAATATCTCTCAGCACTAATGCTCCCCTTCCCTCCCCCTATGAAGGGAAAGAGTTaGTATCAATGGAGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: PRQKKEYLSALMLPFPPPMKGKS*YQWSGR
Trigger: TCTCCCACTCCATTGATACCAACTCTTTCCCTTCAT...AGGGGGAGGGAAGGGGAGCATTAGTGCTGAGAGATATTCTTTCTTCTGCCTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp GTGCTCCAGTTAGAGCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATAGAGCAACAGGATGTTaGGGGAATGAAGGGAAAGAG +
Preference number: 4 (lower is better)
Translates to: VLQLEQQDVGGMKGKSWYRATGC*GNEGKE
Trigger: CTCTTTCCCTTCATTCCCCCAACATCCTGTTGCTCT...ATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGCTCTAACTGGAGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR TCA 90 bp CCAAGGCAGAAGAAAGAATATCTCTCAGCACTAATGCTCCCCTTCCCTCCCCCTTCCCCAAGCAAGTACTaGTCATCTATATTGAAGGTA +
Preference number: 4 (lower is better)
Translates to: PRQKKEYLSALMLPFPPPSPSKY*SSILKV
Trigger: TACCTTCAATATAGATGATCAGTACTTGCTTGGGGA...AGGGGGAGGGAAGGGGAGCATTAGTGCTGAGAGATATTCTTTCTTCTGCCTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR TCA 90 bp TCCAAGGCAGAAGAAAGAATATCTCTCAGCACTAATGCTCCCCTTCCCTCCCCCTCCCCAAGCAAGTACTaGTCATCTATATTGAAGGTA +
Preference number: 4 (lower is better)
Translates to: SKAEERISLSTNAPLPSPSPSKY*SSILKV
Trigger: TACCTTCAATATAGATGATCAGTACTTGCTTGGGGA...GGGGGAGGGAAGGGGAGCATTAGTGCTGAGAGATATTCTTTCTTCTGCCTTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR TCA 90 bp GAGATCACAAGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATTTATTGTTTCTCCTTTaGTCAAAACGTGTCACAGCT +
Preference number: 4 (lower is better)
Translates to: EITRGIWSPGSALSSCPNLLFLL*SKRVTA
Trigger: AGCTGTGACACGTTTTGATCAAAGGAGAAACAATAA...ATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCTTGTGATCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
CDS-3UTR GCA 90 bp GCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATCAATGGAGTGGGAGGTGAGACTAGCATATTaGCGGAAAACATCAGAGATG +
Preference number: 4 (lower is better)
Translates to: ATGCWGNEGKELVSMEWEVRLAY*RKTSEM
Trigger: CATCTCTGATGTTTTCCGGCAATATGCTAGTCTCAC...CTCCCACTCCATTGATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR GCA 90 bp GCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATCAATGGAGTGGGAGAATACTCCAATCAGATaGCACATTGATGCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: ATGCWGNEGKELVSMEWENTPIR*HIDARL
Trigger: AAGCCTGGCATCAATGTGGCATCTGATTGGAGTATT...CTCCCACTCCATTGATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR GCA 90 bp GTGCTCCAGTTAGAGCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATAGCACCAGCAACACTTaGAGAAAGAACTCTCTTCAC +
Preference number: 4 (lower is better)
Translates to: VLQLEQQDVGGMKGKSWYSTSNT*RKNSLH
Trigger: GTGAAGAGAGTTCTTTCTGCAAGTGTTGCTGGTGCT...ATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGCTCTAACTGGAGCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532402.5
ENST00000540933.5
CDS-3UTR CCA 90 bp GTGCTCCAGTTAGAGCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATATAGAGATCTTCAAATaGTCCCACTCGGCAGTGTTG +
Preference number: 4 (lower is better)
Translates to: VLQLEQQDVGGMKGKSWYIEIFK*SHSAVL
Trigger: CAACACTGCCGAGTGGGACCATTTGAAGATCTCTAT...ATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGCTCTAACTGGAGCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR TCA 90 bp GTGCTCCAGTTAGAGCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATATTATATCATTGTGCTaGGATGGTAACAGCCATGGC +
Preference number: 4 (lower is better)
Translates to: VLQLEQQDVGGMKGKSWYIISLC*DGNSHG
Trigger: GCCATGGCTGTTACCATCTCAGCACAATGATATAAT...ATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGCTCTAACTGGAGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR TCA 90 bp CCAAGGCAGAAGAAAGAATATCTCTCAGCACTAATGCTCCCCTTCCCTCCCCCTTTATTGTTTCTCCTTTaGTCAAAACGTGTCACAGCT +
Preference number: 4 (lower is better)
Translates to: PRQKKEYLSALMLPFPPPLLFLL*SKRVTA
Trigger: AGCTGTGACACGTTTTGATCAAAGGAGAAACAATAA...AGGGGGAGGGAAGGGGAGCATTAGTGCTGAGAGATATTCTTTCTTCTGCCTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
CDS-3UTR GCA 90 bp GTGCTCCAGTTAGAGCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATGTGAGACTAGCATATTaGCGGAAAACATCAGAGATG +
Preference number: 4 (lower is better)
Translates to: VLQLEQQDVGGMKGKSWYVRLAY*RKTSEM
Trigger: CATCTCTGATGTTTTCCGGCAATATGCTAGTCTCAC...ATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGCTCTAACTGGAGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp GCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATCAATGGAGTGGGAGACCATTGAACACAGATaGTTCGTTCATGTCATTCCA +
Preference number: 4 (lower is better)
Translates to: ATGCWGNEGKELVSMEWETIEHR*FVHVIP
Trigger: TGGAATGACATGAACGAACCATCTGTGTTCAATGGT...CTCCCACTCCATTGATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CCA 90 bp GTGCTCCAGTTAGAGCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATATGAAGGGAAAGAGTTaGTATCAATGGAGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: VLQLEQQDVGGMKGKSWYMKGKS*YQWSGR
Trigger: TCTCCCACTCCATTGATACCAACTCTTTCCCTTCAT...ATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGCTCTAACTGGAGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR TCA 90 bp GTGCTCCAGTTAGAGCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATTCCCCAAGCAAGTACTaGTCATCTATATTGAAGGTA +
Preference number: 4 (lower is better)
Translates to: VLQLEQQDVGGMKGKSWYSPSKY*SSILKV
Trigger: TACCTTCAATATAGATGATCAGTACTTGCTTGGGGA...ATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGCTCTAACTGGAGCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS GCA 90 bp CTACGCGCCGCCACTGCCGCTACCGCCGCCATCTTGTGCAGAGTTTaGTCCTTGACCCCAAACCTCCCGCCCCATCGCGCGCGCTCAGCC +
Preference number: 5 (lower is better)
Translates to: LRAATAATAAILCRV*SLTPNLPPHRARSA
Trigger: GGCTGAGCGCGCGCGATGGGGCGGGAGGTTTGGGGTCAAGGAGCAAACTCTGCACAAGATGGCGGCGGTAGCGGCAGTGGCGGCGCGTAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540933.5
CDS TCA 90 bp CCGCCACTGCCGCTACCGCCGCCATCTTGTGCAGAGTTTGCTCCTTaGCCCCAAACCTCCCGCCCCATCGCGCGCGCTCAGCCACGTATC +
Preference number: 5 (lower is better)
Translates to: PPLPLPPPSCAEFAP*PQTSRPIARAQPRI
Trigger: GATACGTGGCTGAGCGCGCGCGATGGGGCGGGAGGTTTGGGGTCAAGGAGCAAACTCTGCACAAGATGGCGGCGGTAGCGGCAGTGGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540933.5
CDS-3UTR CAA 90 bp AGCCAGCGAAGAAGGCCCTGGCCAGGACAAAGGGGCGTTCCATGCCCCCAGAGCGATCACAAGAGGAATTaGGAGCCCAGGGTCAGCCCT +
Preference number: 5 (lower is better)
Translates to: SQRRRPWPGQRGVPCPQSDHKRN*EPRVSP
Trigger: AGGGCTGACCCTGGGCTCCAAATTCCTCTTGTGATC...GCTCTGGGGGCATGGAACGCCCCTTTGTCCTGGCCAGGGCCTTCTTCGCTGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532402.5
CDS TCA 90 bp AGGGGCCTGGGTTATGAATGCCAATCCTGGCTCTGTTGCCTCTACTaGGAGATTCTGGCCCCAAGTGCTCTCCCTGGGCCTCAGCCTCCT +
Preference number: 5 (lower is better)
Translates to: RGLGYECQSWLCCLY*EILAPSALPGPQPP
Trigger: AGGAGGCTGAGGCCCAGGGAGAGCACTTGGGGCCAGAATCTCTCAGTAGAGGCAACAGAGCCAGGATTGGCATTCATAACCCAGGCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526732.5
CDS GCA 90 bp GATTGTCCCTCCACGCTGGAACACAGGGATCTAGGGCAAGAGCAATaGCAGGATGAAGTTGCCCCCTTGTCCAACCTTGGGCCCCACAGC +
Preference number: 5 (lower is better)
Translates to: DCPSTLEHRDLGQEQ*QDEVAPLSNLGPHS
Trigger: GCTGTGGGGCCCAAGGTTGGACAAGGGGGCAACTTCATCCTGGCATTGCTCTTGCCCTAGATCCCTGTGTTCCAGCGTGGAGGGACAATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528503.1
CDS-3UTR CAA 90 bp GTCTCCTCTGGCTTGTCGCCATCCCTGGGTGTTTCCTCAGGCTGGGCCCCATCGGTCTTCCCGGCAGTGTaGGAAGATATATCAACCCAG +
Preference number: 5 (lower is better)
Translates to: VSSGLSPSLGVSSGWAPSVFPAV*EDISTQ
Trigger: CTGGGTTGATATATCTTCCAACACTGCCGGGAAGAC...CGATGGGGCCCAGCCTGAGGAAACACCCAGGGATGGCGACAAGCCAGAGGAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532402.5
CDS-3UTR CAA 90 bp GGTACACGGTATCGGGGTCGCCGAGGCTCCAGCTCATCAATCCTGAACCGAGTCCAGAAAGAGCTCTCCTaGAGCTGTACCCTGAGGGCT +
Preference number: 5 (lower is better)
Translates to: GTRYRGRRGSSSSILNRVQKELS*SCTLRA
Trigger: AGCCCTCAGGGTACAGCTCAAGGAGAGCTCTTTCTG...GACTCGGTTCAGGATTGATGAGCTGGAGCCTCGGCGACCCCGATACCGTGTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532402.5
CDS-3UTR CAA 90 bp TGGCCAGGACAAAGGGGCGTTCCATGCCCCCAGAGCGCTGTCTCAGCCCATCAGACGCAGCAGGAACTCTaGGCGAGTCTGATAGTTGAA +
Preference number: 5 (lower is better)
Translates to: WPGQRGVPCPQSAVSAHQTQQEL*ASLIVE
Trigger: TTCAACTATCAGACTCGCCAAGAGTTCCTGCTGCGT...CTGATGGGCTGAGACAGCGCTCTGGGGGCATGGAACGCCCCTTTGTCCTGGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532402.5
CDS-3UTR CAA 90 bp TGGATCAGCCACCAAAACATCTGGTACACGGTATCGGGGTCGCCGAGGCTCCAGACCTTCAGCCTCAGGTaGTCTGCATGCTCAGGGATC +
Preference number: 5 (lower is better)
Translates to: WISHQNIWYTVSGSPRLQTFSLR*SACSGI
Trigger: GATCCCTGAGCATGCAGACAACCTGAGGCTGAAGGT...CTGGAGCCTCGGCGACCCCGATACCGTGTACCAGATGTTTTGGTGGCTGATCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532402.5
CDS-3UTR CAA 90 bp CTGAAGACCGCCGCACTCGCATCCATCGAGGCACGATTGTCCCTCCACGCTGGACCCGCTCAATCCAGATaGGTGTCTCAAAGTGTCCTT +
Preference number: 5 (lower is better)
Translates to: LKTAALASIEARLSLHAGPAQSR*VSQSVL
Trigger: AAGGACACTTTGAGACACCAATCTGGATTGAGCGGG...TCCAGCGTGGAGGGACAATCGTGCCTCGATGGATGCGAGTGCGGCGGTCTTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532402.5
CDS-3UTR CAA 90 bp AGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGATGCAGAGTTTGCTCCTaGACCCCAAACCTCCCGCCC +
Preference number: 5 (lower is better)
Translates to: RGIWSPGSALSSCPNVGRCRVCS*TPNLPP
Trigger: GGGCGGGAGGTTTGGGGTCAAGGAGCAAACTCTGCA...TCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540933.5
CDS CCA 90 bp ACCGGATCACTCAGTGCACAGGGGTCCCGTCCTGTTTGCCTCCTTTaGCTTCCACCATCTTTCCCCACCATGCCCTTCCTTAACTCACCT +
Preference number: 5 (lower is better)
Translates to: TGSLSAQGSRPVCLL*LPPSFPTMPFLNSP
Trigger: AGGTGAGTTAAGGAAGGGCATGGTGGGGAAAGATGGTGGAAGCCAAAGGAGGCAAACAGGACGGGACCCCTGTGCACTGAGTGATCCGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531563.1
CDS-3UTR CAA 90 bp AGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGATCCATCGAGGCACGATaGTCCCTCCACGCTGGAACA +
Preference number: 5 (lower is better)
Translates to: RGIWSPGSALSSCPNVGRSIEAR*SLHAGT
Trigger: TGTTCCAGCGTGGAGGGACAATCGTGCCTCGATGGA...TCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CAA 90 bp CTATTGGTGGATCAGCCACCAAAACATCTGGTACACGGTATCGGGGTCGCCGAGTCCATCGAGGCACGATaGTCCCTCCACGCTGGAACA +
Preference number: 5 (lower is better)
Translates to: LLVDQPPKHLVHGIGVAESIEAR*SLHAGT
Trigger: TGTTCCAGCGTGGAGGGACAATCGTGCCTCGATGGA...CTCGGCGACCCCGATACCGTGTACCAGATGTTTTGGTGGCTGATCCACCAATAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532402.5
CDS-3UTR CAA 90 bp ACGGTATCGGGGTCGCCGAGGCTCCAGCTCATCAATCCTGAACCGAGTCATGTTAGCACCAGCAACACCTaGGTGACCTCATGGATCAGA +
Preference number: 5 (lower is better)
Translates to: TVSGSPRLQLINPEPSHVSTSNT*VTSWIR
Trigger: TCTGATCCATGAGGTCACCAAGGTGTTGCTGGTGCT...AACATGACTCGGTTCAGGATTGATGAGCTGGAGCCTCGGCGACCCCGATACCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529737.5
CDS-3UTR CAA 90 bp CCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGAATCTGGGTCTTAGACACCTTCAGCCTCAGGTaGTCTGCATGCTCAGGGATC +
Preference number: 5 (lower is better)
Translates to: PGSALSSCPNVGRIWVLDTFSLR*SACSGI
Trigger: GATCCCTGAGCATGCAGACAACCTGAGGCTGAAGGT...GTCTAAGACCCAGATTCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CAA 90 bp CCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGAATCTGGGTCTTAGACCAGGTCTCTGCAGCATaGAGCCAGAAGATGCCCAAG +
Preference number: 5 (lower is better)
Translates to: PGSALSSCPNVGRIWVLDQVSAA*SQKMPK
Trigger: CTTGGGCATCTTCTGGCTCAATGCTGCAGAGACCTG...GTCTAAGACCCAGATTCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CAA 90 bp ACATCCAGCGAACATCTGTCTGTGGGGTCTCCCCAGAGCCCTGCAGGTAGTCCAGTGACCTCAGGACCATaGAACACAGATGGTTCGTTC +
Preference number: 5 (lower is better)
Translates to: TSSEHLSVGSPQSPAGSPVTSGP*NTDGSF
Trigger: GAACGAACCATCTGTGTTCAATGGTCCTGAGGTCAC...TGGACTACCTGCAGGGCTCTGGGGAGACCCCACAGACAGATGTTCGCTGGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532402.5
CDS-3UTR CAA 90 bp ACGGTATCGGGGTCGCCGAGGCTCCAGCTCATCAATCCTGAACCGAGTCATGTTTCTGGCTCTGGGTTTTaGAAGAAGCCACCCACATCC +
Preference number: 5 (lower is better)
Translates to: TVSGSPRLQLINPEPSHVSGSGF*KKPPTS
Trigger: GGATGTGGGTGGCTTCTTCAAAAACCCAGAGCCAGA...AACATGACTCGGTTCAGGATTGATGAGCTGGAGCCTCGGCGACCCCGATACCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532402.5
CDS-3UTR CAA 90 bp GAGATCACAAGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATTCCATCGAGGCACGATaGTCCCTCCACGCTGGAACA +
Preference number: 5 (lower is better)
Translates to: EITRGIWSPGSALSSCPNSIEAR*SLHAGT
Trigger: TGTTCCAGCGTGGAGGGACAATCGTGCCTCGATGGA...ATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCTTGTGATCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CAA 90 bp AGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGACAGAAAGAGCTCTCCTaGAGCTGTACCCTGAGGGCT +
Preference number: 5 (lower is better)
Translates to: RGIWSPGSALSSCPNVGRQKELS*SCTLRA
Trigger: AGCCCTCAGGGTACAGCTCAAGGAGAGCTCTTTCTG...TCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CAA 90 bp AGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGAAGCACCAGCAACACCTaGGTGACCTCATGGATCAGA +
Preference number: 5 (lower is better)
Translates to: RGIWSPGSALSSCPNVGRSTSNT*VTSWIR
Trigger: TCTGATCCATGAGGTCACCAAGGTGTTGCTGGTGCT...TCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000648273.1
CDS-3UTR CAA 90 bp CCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGAATCTGGGTCTTAGACAGCACCAGCAACACCTaGGTGACCTCATGGATCAGA +
Preference number: 5 (lower is better)
Translates to: PGSALSSCPNVGRIWVLDSTSNT*VTSWIR
Trigger: TCTGATCCATGAGGTCACCAAGGTGTTGCTGGTGCT...GTCTAAGACCCAGATTCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000648273.1
CDS-3UTR CAA 90 bp AGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGACAGAAAGCCGGGCTATaGGTGGATCAGCCACCAAAA +
Preference number: 5 (lower is better)
Translates to: RGIWSPGSALSSCPNVGRQKAGL*VDQPPK
Trigger: TTTTGGTGGCTGATCCACCAATAGCCCGGCTTTCTG...TCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CAA 90 bp GAGATCACAAGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATCAGGTCTCTGCAGCATaGAGCCAGAAGATGCCCAAG +
Preference number: 5 (lower is better)
Translates to: EITRGIWSPGSALSSCPNQVSAA*SQKMPK
Trigger: CTTGGGCATCTTCTGGCTCAATGCTGCAGAGACCTG...ATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCTTGTGATCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CAA 90 bp CCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGAATCTGGGTCTTAGACTCTGGCTCTGGGTTTTaGAAGAAGCCACCCACATCC +
Preference number: 5 (lower is better)
Translates to: PGSALSSCPNVGRIWVLDSGSGF*KKPPTS
Trigger: GGATGTGGGTGGCTTCTTCAAAAACCCAGAGCCAGA...GTCTAAGACCCAGATTCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CAA 90 bp AGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGATCTGGCTCTGGGTTTTaGAAGAAGCCACCCACATCC +
Preference number: 5 (lower is better)
Translates to: RGIWSPGSALSSCPNVGRSGSGF*KKPPTS
Trigger: GGATGTGGGTGGCTTCTTCAAAAACCCAGAGCCAGA...TCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CAA 90 bp CCAAGGCAGAAGAAAGAATATCTCTCAGCACTAATGCTCCCCTTCCCTCCCCCTTCCATCGAGGCACGATaGTCCCTCCACGCTGGAACA +
Preference number: 5 (lower is better)
Translates to: PRQKKEYLSALMLPFPPPSIEAR*SLHAGT
Trigger: TGTTCCAGCGTGGAGGGACAATCGTGCCTCGATGGA...AGGGGGAGGGAAGGGGAGCATTAGTGCTGAGAGATATTCTTTCTTCTGCCTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CAA 90 bp GGCCCTCTGATGCTCAAACTCCAAGAGTCCTCGGGCATTGACACTAAGCAAAAGGCTACCGCCGCCATCTaGTGCAGAGTTTGCTCCTTG +
Preference number: 5 (lower is better)
Translates to: GPLMLKLQESSGIDTKQKATAAI*CRVCSL
Trigger: CAAGGAGCAAACTCTGCACAAGATGGCGGCGGTAGC...CTTTTGCTTAGTGTCAATGCCCGAGGACTCTTGGAGTTTGAGCATCAGAGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529737.5
CDS-3UTR CAA 90 bp TCCAAGGCAGAAGAAAGAATATCTCTCAGCACTAATGCTCCCCTTCCCTCCCCCGCTACCGCCGCCATCTaGTGCAGAGTTTGCTCCTTG +
Preference number: 5 (lower is better)
Translates to: SKAEERISLSTNAPLPSPATAAI*CRVCSL
Trigger: CAAGGAGCAAACTCTGCACAAGATGGCGGCGGTAGC...GGGGGAGGGAAGGGGAGCATTAGTGCTGAGAGATATTCTTTCTTCTGCCTTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540933.5
CDS-3UTR CAA 90 bp TCAGCCACCAAAACATCTGGTACACGGTATCGGGGTCGCCGAGGCTCCAGCTCATCACAGGTCTTAAAGTaGCTTCTATCCACAGCAAGG +
Preference number: 5 (lower is better)
Translates to: SATKTSGTRYRGRRGSSSSQVLK*LLSTAR
Trigger: CCTTGCTGTGGATAGAAGCAACTTTAAGACCTGTGA...TGAGCTGGAGCCTCGGCGACCCCGATACCGTGTACCAGATGTTTTGGTGGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526210.1
ENST00000529737.5
ENST00000532402.5
ENST00000534613.5
CDS-3UTR CAA 90 bp GAGATCACAAGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATAGCACCAGCAACACCTaGGTGACCTCATGGATCAGA +
Preference number: 5 (lower is better)
Translates to: EITRGIWSPGSALSSCPNSTSNT*VTSWIR
Trigger: TCTGATCCATGAGGTCACCAAGGTGTTGCTGGTGCT...ATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCTTGTGATCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000648273.1
CDS-3UTR CAA 90 bp GCCATGGTTAACTCCACACTGTTCTCATCACGACCAGAGACAGAAAGCCGGGCTCAGAAAGCCGGGCTATaGGTGGATCAGCCACCAAAA +
Preference number: 5 (lower is better)
Translates to: AMVNSTLFSSRPETESRAQKAGL*VDQPPK
Trigger: TTTTGGTGGCTGATCCACCAATAGCCCGGCTTTCTG...AGCCCGGCTTTCTGTCTCTGGTCGTGATGAGAACAGTGTGGAGTTAACCATGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000526210.1
ENST00000529737.5
ENST00000532402.5
ENST00000534613.5
CDS-3UTR CAA 90 bp CCAAGGCAGAAGAAAGAATATCTCTCAGCACTAATGCTCCCCTTCCCTCCCCCTACCTTCAGCCTCAGGTaGTCTGCATGCTCAGGGATC +
Preference number: 5 (lower is better)
Translates to: PRQKKEYLSALMLPFPPPTFSLR*SACSGI
Trigger: GATCCCTGAGCATGCAGACAACCTGAGGCTGAAGGT...AGGGGGAGGGAAGGGGAGCATTAGTGCTGAGAGATATTCTTTCTTCTGCCTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CAA 90 bp AGAGACAGAAAGCCGGGCTATTGGTGGATCAGCCACCAAAACATCTGGTACACGCAGGTCTCTGCAGCATaGAGCCAGAAGATGCCCAAG +
Preference number: 5 (lower is better)
Translates to: RDRKPGYWWISHQNIWYTQVSAA*SQKMPK
Trigger: CTTGGGCATCTTCTGGCTCAATGCTGCAGAGACCTG...CGTGTACCAGATGTTTTGGTGGCTGATCCACCAATAGCCCGGCTTTCTGTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532402.5
CDS-3UTR CAA 90 bp TCCAAGGCAGAAGAAAGAATATCTCTCAGCACTAATGCTCCCCTTCCCTCCCCCCAGGTCTCTGCAGCATaGAGCCAGAAGATGCCCAAG +
Preference number: 5 (lower is better)
Translates to: SKAEERISLSTNAPLPSPQVSAA*SQKMPK
Trigger: CTTGGGCATCTTCTGGCTCAATGCTGCAGAGACCTG...GGGGGAGGGAAGGGGAGCATTAGTGCTGAGAGATATTCTTTCTTCTGCCTTGGA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CAA 90 bp CCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGAATCTGGGTCTTAGACGTCTTCCCGGCAGTGTaGGAAGATATATCAACCCAG +
Preference number: 5 (lower is better)
Translates to: PGSALSSCPNVGRIWVLDVFPAV*EDISTQ
Trigger: CTGGGTTGATATATCTTCCAACACTGCCGGGAAGAC...GTCTAAGACCCAGATTCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CAA 90 bp CCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGAATCTGGGTCTTAGACGTGACCTCAGGACCATaGAACACAGATGGTTCGTTC +
Preference number: 5 (lower is better)
Translates to: PGSALSSCPNVGRIWVLDVTSGP*NTDGSF
Trigger: GAACGAACCATCTGTGTTCAATGGTCCTGAGGTCAC...GTCTAAGACCCAGATTCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CAA 90 bp GAGATCACAAGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATTCTGGCTCTGGGTTTTaGAAGAAGCCACCCACATCC +
Preference number: 5 (lower is better)
Translates to: EITRGIWSPGSALSSCPNSGSGF*KKPPTS
Trigger: GGATGTGGGTGGCTTCTTCAAAAACCCAGAGCCAGA...ATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCTTGTGATCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CAA 90 bp CCAAGGCAGAAGAAAGAATATCTCTCAGCACTAATGCTCCCCTTCCCTCCCCCTCAGAAAGAGCTCTCCTaGAGCTGTACCCTGAGGGCT +
Preference number: 5 (lower is better)
Translates to: PRQKKEYLSALMLPFPPPQKELS*SCTLRA
Trigger: AGCCCTCAGGGTACAGCTCAAGGAGAGCTCTTTCTG...AGGGGGAGGGAAGGGGAGCATTAGTGCTGAGAGATATTCTTTCTTCTGCCTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CAA 90 bp AGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGAACGCAGCAGGAACTCTaGGCGAGTCTGATAGTTGAA +
Preference number: 5 (lower is better)
Translates to: RGIWSPGSALSSCPNVGRTQQEL*ASLIVE
Trigger: TTCAACTATCAGACTCGCCAAGAGTTCCTGCTGCGT...TCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CAA 90 bp CCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGAATCTGGGTCTTAGACACGCAGCAGGAACTCTaGGCGAGTCTGATAGTTGAA +
Preference number: 5 (lower is better)
Translates to: PGSALSSCPNVGRIWVLDTQQEL*ASLIVE
Trigger: TTCAACTATCAGACTCGCCAAGAGTTCCTGCTGCGT...GTCTAAGACCCAGATTCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CAA 90 bp CCAAGGCAGAAGAAAGAATATCTCTCAGCACTAATGCTCCCCTTCCCTCCCCCTGATCACAAGAGGAATTaGGAGCCCAGGGTCAGCCCT +
Preference number: 5 (lower is better)
Translates to: PRQKKEYLSALMLPFPPPDHKRN*EPRVSP
Trigger: AGGGCTGACCCTGGGCTCCAAATTCCTCTTGTGATC...AGGGGGAGGGAAGGGGAGCATTAGTGCTGAGAGATATTCTTTCTTCTGCCTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CAA 90 bp CCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGAATCTGGGTCTTAGACCATCTTGTGCAGAGTTaGCTCCTTGACCCCAAACCT +
Preference number: 5 (lower is better)
Translates to: PGSALSSCPNVGRIWVLDHLVQS*LLDPKP
Trigger: AGGTTTGGGGTCAAGGAGCAAACTCTGCACAAGATG...GTCTAAGACCCAGATTCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540933.5
CDS TCA 90 bp CCTGAACACCAGCCTCTGTCAACATCCCAGAAGAGAAAGGCAGAATaGTTCAGGGGCCTGGGTTATGAATGCCAATCCTGGCTCTGTTGC +
Preference number: 5 (lower is better)
Translates to: PEHQPLSTSQKRKAE*FRGLGYECQSWLCC
Trigger: GCAACAGAGCCAGGATTGGCATTCATAACCCAGGCCCCTGAATCATTCTGCCTTTCTCTTCTGGGATGTTGACAGAGGCTGGTGTTCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526732.5
CDS-3UTR CAA 90 bp CCAAGGCAGAAGAAAGAATATCTCTCAGCACTAATGCTCCCCTTCCCTCCCCCTCAGAAAGCCGGGCTATaGGTGGATCAGCCACCAAAA +
Preference number: 5 (lower is better)
Translates to: PRQKKEYLSALMLPFPPPQKAGL*VDQPPK
Trigger: TTTTGGTGGCTGATCCACCAATAGCCCGGCTTTCTG...AGGGGGAGGGAAGGGGAGCATTAGTGCTGAGAGATATTCTTTCTTCTGCCTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CAA 90 bp ACACTAAGCAAAAGACTTCGGTCCTCTAGTAGGTCAAGGCGGAATGGCCGTGCTCAGAAAGCCGGGCTATaGGTGGATCAGCCACCAAAA +
Preference number: 5 (lower is better)
Translates to: TLSKRLRSSSRSRRNGRAQKAGL*VDQPPK
Trigger: TTTTGGTGGCTGATCCACCAATAGCCCGGCTTTCTG...AGCACGGCCATTCCGCCTTGACCTACTAGAGGACCGAAGTCTTTTGCTTAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000526210.1
ENST00000529737.5
ENST00000532402.5
ENST00000534613.5
CDS-3UTR CAA 90 bp TCCAAGGCAGAAGAAAGAATATCTCTCAGCACTAATGCTCCCCTTCCCTCCCCCCAGAAAGCCGGGCTATaGGTGGATCAGCCACCAAAA +
Preference number: 5 (lower is better)
Translates to: SKAEERISLSTNAPLPSPQKAGL*VDQPPK
Trigger: TTTTGGTGGCTGATCCACCAATAGCCCGGCTTTCTG...GGGGGAGGGAAGGGGAGCATTAGTGCTGAGAGATATTCTTTCTTCTGCCTTGGA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CAA 90 bp GCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATCAATGGAGTGGGAGACCTTCAGCCTCAGGTaGTCTGCATGCTCAGGGATC +
Preference number: 5 (lower is better)
Translates to: ATGCWGNEGKELVSMEWETFSLR*SACSGI
Trigger: GATCCCTGAGCATGCAGACAACCTGAGGCTGAAGGT...CTCCCACTCCATTGATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CAA 90 bp CCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGAATCTGGGTCTTAGACTACAAGGCCATTGGGTaGTACAGCTCATACTGGAAC +
Preference number: 5 (lower is better)
Translates to: PGSALSSCPNVGRIWVLDYKAIG*YSSYWN
Trigger: GTTCCAGTATGAGCTGTACAACCCAATGGCCTTGTA...GTCTAAGACCCAGATTCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CAA 90 bp CCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGAATCTGGGTCTTAGACACCCATACAAGGCCATaGGGTTGTACAGCTCATACT +
Preference number: 5 (lower is better)
Translates to: PGSALSSCPNVGRIWVLDTHTRP*GCTAHT
Trigger: AGTATGAGCTGTACAACCCAATGGCCTTGTATGGGT...GTCTAAGACCCAGATTCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CAA 90 bp GAGATCACAAGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATGTCTTCCCGGCAGTGTaGGAAGATATATCAACCCAG +
Preference number: 5 (lower is better)
Translates to: EITRGIWSPGSALSSCPNVFPAV*EDISTQ
Trigger: CTGGGTTGATATATCTTCCAACACTGCCGGGAAGAC...ATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCTTGTGATCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CAA 90 bp CCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGAATCTGGGTCTTAGACCAGGTGAAATACCGCTaGCCATCAGCATGTTCAATG +
Preference number: 5 (lower is better)
Translates to: PGSALSSCPNVGRIWVLDQVKYR*PSACSM
Trigger: CATTGAACATGCTGATGGCAAGCGGTATTTCACCTG...GTCTAAGACCCAGATTCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CAA 90 bp GAGATCACAAGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATGTGACCTCAGGACCATaGAACACAGATGGTTCGTTC +
Preference number: 5 (lower is better)
Translates to: EITRGIWSPGSALSSCPNVTSGP*NTDGSF
Trigger: GAACGAACCATCTGTGTTCAATGGTCCTGAGGTCAC...ATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCTTGTGATCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CAA 90 bp GAGATCACAAGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATCCCGCTCAATCCAGATaGGTGTCTCAAAGTGTCCTT +
Preference number: 5 (lower is better)
Translates to: EITRGIWSPGSALSSCPNPAQSR*VSQSVL
Trigger: AAGGACACTTTGAGACACCAATCTGGATTGAGCGGG...ATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCTTGTGATCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CAA 90 bp CCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGAATCTGGGTCTTAGACTTTCTGGAGATCCTTTaGTCTGGAGTACCACAGCTG +
Preference number: 5 (lower is better)
Translates to: PGSALSSCPNVGRIWVLDFLEIL*SGVPQL
Trigger: CAGCTGTGGTACTCCAGACAAAAGGATCTCCAGAAA...GTCTAAGACCCAGATTCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CAA 90 bp CACCAAAACATCTGGTACACGGTATCGGGGTCGCCGAGGCTCCAGCTCATCAATTCACAGGTCTTAAAGTaGCTTCTATCCACAGCAAGG +
Preference number: 5 (lower is better)
Translates to: HQNIWYTVSGSPRLQLINSQVLK*LLSTAR
Trigger: CCTTGCTGTGGATAGAAGCAACTTTAAGACCTGTGA...ATTGATGAGCTGGAGCCTCGGCGACCCCGATACCGTGTACCAGATGTTTTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526210.1
ENST00000529737.5
ENST00000532402.5
ENST00000534613.5
CDS-3UTR CAA 90 bp GCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATCAATGGAGTGGGAGCAGAAAGCCGGGCTATaGGTGGATCAGCCACCAAAA +
Preference number: 5 (lower is better)
Translates to: ATGCWGNEGKELVSMEWEQKAGL*VDQPPK
Trigger: TTTTGGTGGCTGATCCACCAATAGCCCGGCTTTCTG...CTCCCACTCCATTGATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CAA 90 bp TTGACACTAAGCAAAAGACTTCGGTCCTCTAGTAGGTCAAGGCGGAATGGCCGTCAGAAAGCCGGGCTATaGGTGGATCAGCCACCAAAA +
Preference number: 5 (lower is better)
Translates to: LTLSKRLRSSSRSRRNGRQKAGL*VDQPPK
Trigger: TTTTGGTGGCTGATCCACCAATAGCCCGGCTTTCTG...ACGGCCATTCCGCCTTGACCTACTAGAGGACCGAAGTCTTTTGCTTAGTGTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000526210.1
ENST00000529737.5
ENST00000532402.5
ENST00000534613.5
CDS-3UTR CAA 90 bp GTGCTCCAGTTAGAGCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATACCTTCAGCCTCAGGTaGTCTGCATGCTCAGGGATC +
Preference number: 5 (lower is better)
Translates to: VLQLEQQDVGGMKGKSWYTFSLR*SACSGI
Trigger: GATCCCTGAGCATGCAGACAACCTGAGGCTGAAGGT...ATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGCTCTAACTGGAGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CAA 90 bp CCAAGGCAGAAGAAAGAATATCTCTCAGCACTAATGCTCCCCTTCCCTCCCCCTGTCTTCCCGGCAGTGTaGGAAGATATATCAACCCAG +
Preference number: 5 (lower is better)
Translates to: PRQKKEYLSALMLPFPPPVFPAV*EDISTQ
Trigger: CTGGGTTGATATATCTTCCAACACTGCCGGGAAGAC...AGGGGGAGGGAAGGGGAGCATTAGTGCTGAGAGATATTCTTTCTTCTGCCTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CAA 90 bp TATCGGGGTCGCCGAGGCTCCAGCTCATCAATCCTGAACCGAGTCATGTTCTTTCAGGTGAAATACCGCTaGCCATCAGCATGTTCAATG +
Preference number: 5 (lower is better)
Translates to: YRGRRGSSSSILNRVMFFQVKYR*PSACSM
Trigger: CATTGAACATGCTGATGGCAAGCGGTATTTCACCTG...AAAGAACATGACTCGGTTCAGGATTGATGAGCTGGAGCCTCGGCGACCCCGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532402.5
CDS-3UTR CAA 90 bp GCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATCAATGGAGTGGGAGTCTGGCTCTGGGTTTTaGAAGAAGCCACCCACATCC +
Preference number: 5 (lower is better)
Translates to: ATGCWGNEGKELVSMEWESGSGF*KKPPTS
Trigger: GGATGTGGGTGGCTTCTTCAAAAACCCAGAGCCAGA...CTCCCACTCCATTGATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CAA 90 bp TCGGGGTCGCCGAGGCTCCAGCTCATCAATCCTGAACCGAGTCATGTTCTTTTGATGCTTCTGGTAGCTTaGAATGTCATACCACACCTC +
Preference number: 5 (lower is better)
Translates to: SGSPRLQLINPEPSHVLLMLLVA*NVIPHL
Trigger: GAGGTGTGGTATGACATTCAAAGCTACCAGAAGCAT...CAAAAGAACATGACTCGGTTCAGGATTGATGAGCTGGAGCCTCGGCGACCCCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532402.5
CDS-3UTR CAA 90 bp AGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGAATGCTTCTGGTAGCTTaGAATGTCATACCACACCTC +
Preference number: 5 (lower is better)
Translates to: RGIWSPGSALSSCPNVGRMLLVA*NVIPHL
Trigger: GAGGTGTGGTATGACATTCAAAGCTACCAGAAGCAT...TCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CAA 90 bp GTGCTCCAGTTAGAGCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATCAGAAAGAGCTCTCCTaGAGCTGTACCCTGAGGGCT +
Preference number: 5 (lower is better)
Translates to: VLQLEQQDVGGMKGKSWYQKELS*SCTLRA
Trigger: AGCCCTCAGGGTACAGCTCAAGGAGAGCTCTTTCTG...ATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGCTCTAACTGGAGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CAA 90 bp TCCAAGGCAGAAGAAAGAATATCTCTCAGCACTAATGCTCCCCTTCCCTCCCCCACGCAGCAGGAACTCTaGGCGAGTCTGATAGTTGAA +
Preference number: 5 (lower is better)
Translates to: SKAEERISLSTNAPLPSPTQQEL*ASLIVE
Trigger: TTCAACTATCAGACTCGCCAAGAGTTCCTGCTGCGT...GGGGGAGGGAAGGGGAGCATTAGTGCTGAGAGATATTCTTTCTTCTGCCTTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CAA 90 bp CCAAGGCAGAAGAAAGAATATCTCTCAGCACTAATGCTCCCCTTCCCTCCCCCTCCCGCTCAATCCAGATaGGTGTCTCAAAGTGTCCTT +
Preference number: 5 (lower is better)
Translates to: PRQKKEYLSALMLPFPPPPAQSR*VSQSVL
Trigger: AAGGACACTTTGAGACACCAATCTGGATTGAGCGGG...AGGGGGAGGGAAGGGGAGCATTAGTGCTGAGAGATATTCTTTCTTCTGCCTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CAA 90 bp GAGATCACAAGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATTTTCTGGAGATCCTTTaGTCTGGAGTACCACAGCTG +
Preference number: 5 (lower is better)
Translates to: EITRGIWSPGSALSSCPNFLEIL*SGVPQL
Trigger: CAGCTGTGGTACTCCAGACAAAAGGATCTCCAGAAA...ATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCTTGTGATCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CAA 90 bp TATCGGGGTCGCCGAGGCTCCAGCTCATCAATCCTGAACCGAGTCATGTTCTTTTTTCTGGAGATCCTTTaGTCTGGAGTACCACAGCTG +
Preference number: 5 (lower is better)
Translates to: YRGRRGSSSSILNRVMFFFLEIL*SGVPQL
Trigger: CAGCTGTGGTACTCCAGACAAAAGGATCTCCAGAAA...AAAGAACATGACTCGGTTCAGGATTGATGAGCTGGAGCCTCGGCGACCCCGATA
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000532402.5
CDS-3UTR CAA 90 bp GAGATCACAAGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATTCACAGGTCTTAAAGTaGCTTCTATCCACAGCAAGG +
Preference number: 5 (lower is better)
Translates to: EITRGIWSPGSALSSCPNSQVLK*LLSTAR
Trigger: CCTTGCTGTGGATAGAAGCAACTTTAAGACCTGTGA...ATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCTTGTGATCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CAA 90 bp TCGCCGAGGCTCCAGCTCATCAATCCTGAACCGAGTCATGTTCTTTTGAAGCCCTCACAGGTCTTAAAGTaGCTTCTATCCACAGCAAGG +
Preference number: 5 (lower is better)
Translates to: SPRLQLINPEPSHVLLKPSQVLK*LLSTAR
Trigger: CCTTGCTGTGGATAGAAGCAACTTTAAGACCTGTGA...GGGCTTCAAAAGAACATGACTCGGTTCAGGATTGATGAGCTGGAGCCTCGGCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000526210.1
ENST00000529737.5
ENST00000532402.5
ENST00000534613.5
CDS-3UTR CAA 90 bp GAGATCACAAGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATATGCTTCTCTGTCGCTaGCAGAAAGAACTCTCTTCA +
Preference number: 5 (lower is better)
Translates to: EITRGIWSPGSALSSCPNMLLCR*QKELSS
Trigger: TGAAGAGAGTTCTTTCTGCAAGCGACAGAGAAGCAT...ATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCTTGTGATCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000648273.1
CDS-3UTR CAA 90 bp TCCAAGGCAGAAGAAAGAATATCTCTCAGCACTAATGCTCCCCTTCCCTCCCCCTACAAGGCCATTGGGTaGTACAGCTCATACTGGAAC +
Preference number: 5 (lower is better)
Translates to: SKAEERISLSTNAPLPSPYKAIG*YSSYWN
Trigger: GTTCCAGTATGAGCTGTACAACCCAATGGCCTTGTA...GGGGGAGGGAAGGGGAGCATTAGTGCTGAGAGATATTCTTTCTTCTGCCTTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CAA 90 bp CCAAGGCAGAAGAAAGAATATCTCTCAGCACTAATGCTCCCCTTCCCTCCCCCTACCCATACAAGGCCATaGGGTTGTACAGCTCATACT +
Preference number: 5 (lower is better)
Translates to: PRQKKEYLSALMLPFPPPTHTRP*GCTAHT
Trigger: AGTATGAGCTGTACAACCCAATGGCCTTGTATGGGT...AGGGGGAGGGAAGGGGAGCATTAGTGCTGAGAGATATTCTTTCTTCTGCCTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CAA 90 bp AGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGATGTGAGACTAGCATATaGCCGGAAAACATCAGAGAT +
Preference number: 5 (lower is better)
Translates to: RGIWSPGSALSSCPNVGRCETSI*PENIRD
Trigger: ATCTCTGATGTTTTCCGGCAATATGCTAGTCTCACA...TCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CAA 90 bp GCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATCAATGGAGTGGGAGGTGACCTCAGGACCATaGAACACAGATGGTTCGTTC +
Preference number: 5 (lower is better)
Translates to: ATGCWGNEGKELVSMEWEVTSGP*NTDGSF
Trigger: GAACGAACCATCTGTGTTCAATGGTCCTGAGGTCAC...CTCCCACTCCATTGATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CAA 90 bp GCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATCAATGGAGTGGGAGACGCAGCAGGAACTCTaGGCGAGTCTGATAGTTGAA +
Preference number: 5 (lower is better)
Translates to: ATGCWGNEGKELVSMEWETQQEL*ASLIVE
Trigger: TTCAACTATCAGACTCGCCAAGAGTTCCTGCTGCGT...CTCCCACTCCATTGATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CAA 90 bp GCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATCAATGGAGTGGGAGCCCGCTCAATCCAGATaGGTGTCTCAAAGTGTCCTT +
Preference number: 5 (lower is better)
Translates to: ATGCWGNEGKELVSMEWEPAQSR*VSQSVL
Trigger: AAGGACACTTTGAGACACCAATCTGGATTGAGCGGG...CTCCCACTCCATTGATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS TCA 90 bp GGGACCATGATGCTTCTGGTAGCTTTGAATGTCATACCACACCTGTaGGTGACAAAAGAGGTAAGATACCGGATCACTCAGTGCACAGGG +
Preference number: 5 (lower is better)
Translates to: GTMMLLVALNVIPHL*VTKEVRYRITQCTG
Trigger: CCCTGTGCACTGAGTGATCCGGTATCTTACCTCTTTTGTCACTCACAGGTGTGGTATGACATTCAAAGCTACCAGAAGCATCATGGTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531563.1
CDS-3UTR CAA 90 bp TCCAAGGCAGAAGAAAGAATATCTCTCAGCACTAATGCTCCCCTTCCCTCCCCCTCACAGGTCTTAAAGTaGCTTCTATCCACAGCAAGG +
Preference number: 5 (lower is better)
Translates to: SKAEERISLSTNAPLPSPSQVLK*LLSTAR
Trigger: CCTTGCTGTGGATAGAAGCAACTTTAAGACCTGTGA...GGGGGAGGGAAGGGGAGCATTAGTGCTGAGAGATATTCTTTCTTCTGCCTTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CAA 90 bp TCCAAGGCAGAAGAAAGAATATCTCTCAGCACTAATGCTCCCCTTCCCTCCCCCATGCTTCTCTGTCGCTaGCAGAAAGAACTCTCTTCA +
Preference number: 5 (lower is better)
Translates to: SKAEERISLSTNAPLPSPMLLCR*QKELSS
Trigger: TGAAGAGAGTTCTTTCTGCAAGCGACAGAGAAGCAT...GGGGGAGGGAAGGGGAGCATTAGTGCTGAGAGATATTCTTTCTTCTGCCTTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000648273.1
CDS-3UTR CAA 90 bp TGGTTAACTCCACACTGTTCTCATCACGACCAGAGACAGAAAGCCGGGCTATTGTACAAGGCCATTGGGTaGTACAGCTCATACTGGAAC +
Preference number: 5 (lower is better)
Translates to: WLTPHCSHHDQRQKAGLLYKAIG*YSSYWN
Trigger: GTTCCAGTATGAGCTGTACAACCCAATGGCCTTGTA...CAATAGCCCGGCTTTCTGTCTCTGGTCGTGATGAGAACAGTGTGGAGTTAACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532402.5
CDS-3UTR CAA 90 bp GCCATGGTTAACTCCACACTGTTCTCATCACGACCAGAGACAGAAAGCCGGGCTTGTGAGACTAGCATATaGCCGGAAAACATCAGAGAT +
Preference number: 5 (lower is better)
Translates to: AMVNSTLFSSRPETESRACETSI*PENIRD
Trigger: ATCTCTGATGTTTTCCGGCAATATGCTAGTCTCACA...AGCCCGGCTTTCTGTCTCTGGTCGTGATGAGAACAGTGTGGAGTTAACCATGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532402.5
CDS-3UTR CAA 90 bp GTGCTCCAGTTAGAGCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATGTGACCTCAGGACCATaGAACACAGATGGTTCGTTC +
Preference number: 5 (lower is better)
Translates to: VLQLEQQDVGGMKGKSWYVTSGP*NTDGSF
Trigger: GAACGAACCATCTGTGTTCAATGGTCCTGAGGTCAC...ATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGCTCTAACTGGAGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CAA 90 bp CCAAGGCAGAAGAAAGAATATCTCTCAGCACTAATGCTCCCCTTCCCTCCCCCTATGCTTCTGGTAGCTTaGAATGTCATACCACACCTC +
Preference number: 5 (lower is better)
Translates to: PRQKKEYLSALMLPFPPPMLLVA*NVIPHL
Trigger: GAGGTGTGGTATGACATTCAAAGCTACCAGAAGCAT...AGGGGGAGGGAAGGGGAGCATTAGTGCTGAGAGATATTCTTTCTTCTGCCTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CAA 90 bp GTGCTCCAGTTAGAGCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATCCCGCTCAATCCAGATaGGTGTCTCAAAGTGTCCTT +
Preference number: 5 (lower is better)
Translates to: VLQLEQQDVGGMKGKSWYPAQSR*VSQSVL
Trigger: AAGGACACTTTGAGACACCAATCTGGATTGAGCGGG...ATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGCTCTAACTGGAGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CAA 90 bp AGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGACTAGAGAAAAGGTTCTaGATCTTATCCCATATGCTA +
Preference number: 5 (lower is better)
Translates to: RGIWSPGSALSSCPNVGRLEKRF*ILSHML
Trigger: TAGCATATGGGATAAGATCAAGAACCTTTTCTCTAG...TCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000346178.8
CDS-3UTR CAA 90 bp GTGCTCCAGTTAGAGCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATTACAAGGCCATTGGGTaGTACAGCTCATACTGGAAC +
Preference number: 5 (lower is better)
Translates to: VLQLEQQDVGGMKGKSWYYKAIG*YSSYWN
Trigger: GTTCCAGTATGAGCTGTACAACCCAATGGCCTTGTA...ATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGCTCTAACTGGAGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CAA 90 bp GTGCTCCAGTTAGAGCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATACCCATACAAGGCCATaGGGTTGTACAGCTCATACT +
Preference number: 5 (lower is better)
Translates to: VLQLEQQDVGGMKGKSWYTHTRP*GCTAHT
Trigger: AGTATGAGCTGTACAACCCAATGGCCTTGTATGGGT...ATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGCTCTAACTGGAGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CAA 90 bp CCAAGGCAGAAGAAAGAATATCTCTCAGCACTAATGCTCCCCTTCCCTCCCCCTTGTGAGACTAGCATATaGCCGGAAAACATCAGAGAT +
Preference number: 5 (lower is better)
Translates to: PRQKKEYLSALMLPFPPPCETSI*PENIRD
Trigger: ATCTCTGATGTTTTCCGGCAATATGCTAGTCTCACA...AGGGGGAGGGAAGGGGAGCATTAGTGCTGAGAGATATTCTTTCTTCTGCCTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CAA 90 bp GTGCTCCAGTTAGAGCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATCAGGTGAAATACCGCTaGCCATCAGCATGTTCAATG +
Preference number: 5 (lower is better)
Translates to: VLQLEQQDVGGMKGKSWYQVKYR*PSACSM
Trigger: CATTGAACATGCTGATGGCAAGCGGTATTTCACCTG...ATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGCTCTAACTGGAGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CAA 90 bp GCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATCAATGGAGTGGGAGATGCTTCTGGTAGCTTaGAATGTCATACCACACCTC +
Preference number: 5 (lower is better)
Translates to: ATGCWGNEGKELVSMEWEMLLVA*NVIPHL
Trigger: GAGGTGTGGTATGACATTCAAAGCTACCAGAAGCAT...CTCCCACTCCATTGATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CAA 90 bp CCAGGGTCAGCCCTCTCATCCTGCCCAAATGTTGGCAGAATCTGGGTCTTAGACTTTATTGTTTCTCCTTaGATCAAAACGTGTCACAGC +
Preference number: 5 (lower is better)
Translates to: PGSALSSCPNVGRIWVLDFIVSP*IKTCHS
Trigger: GCTGTGACACGTTTTGATCAAAGGAGAAACAATAAA...GTCTAAGACCCAGATTCTGCCAACATTTGGGCAGGATGAGAGGGCTGACCCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
CDS-3UTR CAA 90 bp AGGTTCTTGATCTTATCCCATATGCTACCAAGCGTGAGATTAACCTTATCCGAGCAGAAAGCCGGGCTATaGGTGGATCAGCCACCAAAA +
Preference number: 5 (lower is better)
Translates to: RFLILSHMLPSVRLTLSEQKAGL*VDQPPK
Trigger: TTTTGGTGGCTGATCCACCAATAGCCCGGCTTTCTG...CTCGGATAAGGTTAATCTCACGCTTGGTAGCATATGGGATAAGATCAAGAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534613.5
CDS-3UTR CAA 90 bp GCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATCAATGGAGTGGGAGTGTGAGACTAGCATATaGCCGGAAAACATCAGAGAT +
Preference number: 5 (lower is better)
Translates to: ATGCWGNEGKELVSMEWECETSI*PENIRD
Trigger: ATCTCTGATGTTTTCCGGCAATATGCTAGTCTCACA...CTCCCACTCCATTGATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CAA 90 bp GAGATCACAAGAGGAATTTGGAGCCCAGGGTCAGCCCTCTCATCCTGCCCAAATTTTATTGTTTCTCCTTaGATCAAAACGTGTCACAGC +
Preference number: 5 (lower is better)
Translates to: EITRGIWSPGSALSSCPNFIVSP*IKTCHS
Trigger: GCTGTGACACGTTTTGATCAAAGGAGAAACAATAAA...ATTTGGGCAGGATGAGAGGGCTGACCCTGGGCTCCAAATTCCTCTTGTGATCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
CDS-3UTR CAA 90 bp CCATGGTTAACTCCACACTGTTCTCATCACGACCAGAGACAGAAAGCCGGGCTACTAGAGAAAAGGTTCTaGATCTTATCCCATATGCTA +
Preference number: 5 (lower is better)
Translates to: PWLTPHCSHHDQRQKAGLLEKRF*ILSHML
Trigger: TAGCATATGGGATAAGATCAAGAACCTTTTCTCTAG...TAGCCCGGCTTTCTGTCTCTGGTCGTGATGAGAACAGTGTGGAGTTAACCATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534613.5
CDS-3UTR CAA 90 bp GTGCTCCAGTTAGAGCAACAGGATGTTGGGGGAATGAAGGGAAAGAGTTGGTATTGTGAGACTAGCATATaGCCGGAAAACATCAGAGAT +
Preference number: 5 (lower is better)
Translates to: VLQLEQQDVGGMKGKSWYCETSI*PENIRD
Trigger: ATCTCTGATGTTTTCCGGCAATATGCTAGTCTCACA...ATACCAACTCTTTCCCTTCATTCCCCCAACATCCTGTTGCTCTAACTGGAGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
ENST00000648273.1
CDS-3UTR CAA 90 bp CCATGGTTAACTCCACACTGTTCTCATCACGACCAGAGACAGAAAGCCGGGCTATTTATTGTTTCTCCTTaGATCAAAACGTGTCACAGC +
Preference number: 5 (lower is better)
Translates to: PWLTPHCSHHDQRQKAGLFIVSP*IKTCHS
Trigger: GCTGTGACACGTTTTGATCAAAGGAGAAACAATAAA...TAGCCCGGCTTTCTGTCTCTGGTCGTGATGAGAACAGTGTGGAGTTAACCATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532402.5
CDS-3UTR CAA 90 bp CCAAGGCAGAAGAAAGAATATCTCTCAGCACTAATGCTCCCCTTCCCTCCCCCTTTTATTGTTTCTCCTTaGATCAAAACGTGTCACAGC +
Preference number: 5 (lower is better)
Translates to: PRQKKEYLSALMLPFPPPFIVSP*IKTCHS
Trigger: GCTGTGACACGTTTTGATCAAAGGAGAAACAATAAA...AGGGGGAGGGAAGGGGAGCATTAGTGCTGAGAGATATTCTTTCTTCTGCCTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000532402.5
ENST00000540933.5
CDS TCA 90 bp TGGAGGAAGGGACTAAATGTTAAAGCTTGGAGAGGGAACCCACAATaGGCAGATAAGTTTGCAAAGGATGGGGAGAGAAATGAGAAAGGA +
Preference number: 5 (lower is better)
Translates to: WRKGLNVKAWRGNPQ*ADKFAKDGERNEKG
Trigger: TCCTTTCTCATTTCTCTCCCCATCCTTTGCAAACTTATCTGCTCATTGTGGGTTCCCTCTCCAAGCTTTAACATTTAGTCCCTTCCTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526732.5
CDS CAA 90 bp CCTACGCGCCGCCACTGCCGCTACCGCCGCCATCTTGTGCAGAGTTaGCTCCTTGACCCCAAACCTCCCGCCCCATCGCGCGCGCTCAGC +
Preference number: 6 (lower is better)
Translates to: PTRRHCRYRRHLVQS*LLDPKPPAPSRALS
Trigger: GCTGAGCGCGCGCGATGGGGCGGGAGGTTTGGGGTCAAGGAGCAAACTCTGCACAAGATGGCGGCGGTAGCGGCAGTGGCGGCGCGTAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540933.5
CDS CAA 90 bp GCCGCCACTGCCGCTACCGCCGCCATCTTGTGCAGAGTTTGCTCCTaGACCCCAAACCTCCCGCCCCATCGCGCGCGCTCAGCCACGTAT +
Preference number: 6 (lower is better)
Translates to: AATAATAAILCRVCS*TPNLPPHRARSATY
Trigger: ATACGTGGCTGAGCGCGCGCGATGGGGCGGGAGGTTTGGGGTCAAGGAGCAAACTCTGCACAAGATGGCGGCGGTAGCGGCAGTGGCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540933.5
CDS CAA 90 bp CAAGACCGCCTCCTACGCGCCGCCACTGCCGCTACCGCCGCCATCTaGTGCAGAGTTTGCTCCTTGACCCCAAACCTCCCGCCCCATCGC +
Preference number: 6 (lower is better)
Translates to: QDRLLRAATAATAAI*CRVCSLTPNLPPHR
Trigger: GCGATGGGGCGGGAGGTTTGGGGTCAAGGAGCAAACTCTGCACAAGATGGCGGCGGTAGCGGCAGTGGCGGCGCGTAGGAGGCGGTCTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540933.5
CDS TCA 72 bp CCGCTACCGCCGCCATCTTGTGCAGAGTTTGCTCCTTaGCCCCAAACCTCCCGCCCCATCGCGCGCGCTCAG +
Preference number: 6 (lower is better)
Translates to: PLPPPSCAEFAP*PQTSRPIARAQ
Trigger: CTGAGCGCGCGCGATGGGGCGGGAGGTTTGGGGTCAAGGAGCAAACTCTGCACAAGATGGCGGCGGTAGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540933.5
CDS GCA 72 bp GCCACTGCCGCTACCGCCGCCATCTTGTGCAGAGTTTaGTCCTTGACCCCAAACCTCCCGCCCCATCGCGCG +
Preference number: 6 (lower is better)
Translates to: ATAATAAILCRV*SLTPNLPPHRA
Trigger: CGCGCGATGGGGCGGGAGGTTTGGGGTCAAGGAGCAAACTCTGCACAAGATGGCGGCGGTAGCGGCAGTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540933.5
CDS CAA 72 bp GCCGCTACCGCCGCCATCTTGTGCAGAGTTTGCTCCTaGACCCCAAACCTCCCGCCCCATCGCGCGCGCTCA +
Preference number: 6 (lower is better)
Translates to: AATAAILCRVCS*TPNLPPHRARS
Trigger: TGAGCGCGCGCGATGGGGCGGGAGGTTTGGGGTCAAGGAGCAAACTCTGCACAAGATGGCGGCGGTAGCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540933.5
CDS CAA 72 bp CGCCACTGCCGCTACCGCCGCCATCTTGTGCAGAGTTaGCTCCTTGACCCCAAACCTCCCGCCCCATCGCGC +
Preference number: 6 (lower is better)
Translates to: RHCRYRRHLVQS*LLDPKPPAPSR
Trigger: GCGCGATGGGGCGGGAGGTTTGGGGTCAAGGAGCAAACTCTGCACAAGATGGCGGCGGTAGCGGCAGTGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540933.5
CDS GCA 72 bp CAAAGACGCCCAAGACCGCCTCCTACGCGCCGCCACTaGCGCTACCGCCGCCATCTTGTGCAGAGTTTGCTC +
Preference number: 6 (lower is better)
Translates to: QRRPRPPPTRRH*RYRRHLVQSLL
Trigger: GAGCAAACTCTGCACAAGATGGCGGCGGTAGCGGCAGTGGCGGCGCGTAGGAGGCGGTCTTGGGCGTCTTTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529737.5
ENST00000540933.5
CDS CAA 72 bp CTCCTACGCGCCGCCACTGCCGCTACCGCCGCCATCTaGTGCAGAGTTTGCTCCTTGACCCCAAACCTCCCG +
Preference number: 6 (lower is better)
Translates to: LLRAATAATAAI*CRVCSLTPNLP
Trigger: CGGGAGGTTTGGGGTCAAGGAGCAAACTCTGCACAAGATGGCGGCGGTAGCGGCAGTGGCGGCGCGTAGGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540933.5
CDS GCA 72 bp ACCAGAGACAGAAAGCCGCCTCCTACGCGCCGCCACTaGCGCTACCGCCGCCATCTTGTGCAGAGTTTGCTC +
Preference number: 6 (lower is better)
Translates to: TRDRKPPPTRRH*RYRRHLVQSLL
Trigger: GAGCAAACTCTGCACAAGATGGCGGCGGTAGCGGCAGTGGCGGCGCGTAGGAGGCGGCTTTCTGTCTCTGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525994.1
ENST00000534779.5
CDS CCA 72 bp CCTTCCCCTGAGTCTCCTTTGCCTTGTCGCCATCCCTaGGTGTTTCCTCAGGCTGGGCCCCATCGCCCTCAG +
Preference number: 6 (lower is better)
Translates to: PSPESPLPCRHP*VFPQAGPHRPQ
Trigger: CTGAGGGCGATGGGGCCCAGCCTGAGGAAACACCCAGGGATGGCGACAAGGCAAAGGAGACTCAGGGGAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534422.5
CDS CCA 72 bp TCTGGCCCCAAGTGCTCTCCCTGGGCCTCAGCCTCCTaGCCTGACACAATGGCTTTGCAAAGGCATGTGGGT +
Preference number: 6 (lower is better)
Translates to: SGPKCSPWASAS*PDTMALQRHVG
Trigger: ACCCACATGCCTTTGCAAAGCCATTGTGTCAGGCCAGGAGGCTGAGGCCCAGGGAGAGCACTTGGGGCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526732.5
CDS CCA 72 bp GCCAATCCTGGCTCTGTTGCCTCTACTGAGAGATTCTaGCCCCAAGTGCTCTCCCTGGGCCTCAGCCTCCTG +
Preference number: 6 (lower is better)
Translates to: ANPGSVASTERF*PQVLSLGLSLL
Trigger: CAGGAGGCTGAGGCCCAGGGAGAGCACTTGGGGCCAGAATCTCTCAGTAGAGGCAACAGAGCCAGGATTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526732.5
CDS CAA 72 bp CTGAAGACCGCCGCACTCGCATCCATCGAGGCACGATaGTCCCTCCACGCTGGAACACAGGGATCTAGGGCA +
Preference number: 6 (lower is better)
Translates to: LKTAALASIEAR*SLHAGTQGSRA
Trigger: TGCCCTAGATCCCTGTGTTCCAGCGTGGAGGGACAATCGTGCCTCGATGGATGCGAGTGCGGCGGTCTTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528503.1
CDS CAA 72 bp CCTCAGGCTGGGCCCCATCGCCCTCAGCTGGGTCTTTaGATCCTTGCCTGGAAGGTAGGAGAGCTGTCTGCT +
Preference number: 6 (lower is better)
Translates to: PQAGPHRPQLGL*ILAWKVGELSA
Trigger: AGCAGACAGCTCTCCTACCTTCCAGGCAAGGATCAAAAGACCCAGCTGAGGGCGATGGGGCCCAGCCTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526732.5
ENST00000534422.5
CDS TCA 72 bp GGAACACAGGGATCTAGGGCAAGAGCAATGCCAGGATaGAGTTGCCCCCTTGTCCAACCTTGGGCCCCACAG +
Preference number: 6 (lower is better)
Translates to: GTQGSRARAMPG*SCPLVQPWAPQ
Trigger: CTGTGGGGCCCAAGGTTGGACAAGGGGGCAACTTCATCCTGGCATTGCTCTTGCCCTAGATCCCTGTGTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528503.1
CDS GCA 72 bp TCCACGCTGGAACACAGGGATCTAGGGCAAGAGCAATaGCAGGATGAAGTTGCCCCCTTGTCCAACCTTGGG +
Preference number: 6 (lower is better)
Translates to: STLEHRDLGQEQ*QDEVAPLSNLG
Trigger: CCCAAGGTTGGACAAGGGGGCAACTTCATCCTGGCATTGCTCTTGCCCTAGATCCCTGTGTTCCAGCGTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528503.1
CDS CAA 90 bp TCATACATTCTGAAGACCGCCGCACTCGCATCCATCGAGGCACGATaGTCCCTCCACGCTGGAACACAGGGATCTAGGGCAAGAGCAATG +
Preference number: 6 (lower is better)
Translates to: SYILKTAALASIEAR*SLHAGTQGSRARAM
Trigger: CATTGCTCTTGCCCTAGATCCCTGTGTTCCAGCGTGGAGGGACAATCGTGCCTCGATGGATGCGAGTGCGGCGGTCTTCAGAATGTATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528503.1
CDS TCA 72 bp GGTTATGAATGCCAATCCTGGCTCTGTTGCCTCTACTaGGAGATTCTGGCCCCAAGTGCTCTCCCTGGGCCT +
Preference number: 6 (lower is better)
Translates to: GYECQSWLCCLY*EILAPSALPGP
Trigger: AGGCCCAGGGAGAGCACTTGGGGCCAGAATCTCTCAGTAGAGGCAACAGAGCCAGGATTGGCATTCATAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526732.5
CDS CCA 72 bp AGCACCAGCAACACCTTGGTGACCTCATGGATCAGATaGACCGTGAGGGAATCAGGACCAAGCTGTAGAGAG +
Preference number: 6 (lower is better)
Translates to: STSNTLVTSWIR*TVRESGPSCRE
Trigger: CTCTCTACAGCTTGGTCCTGATTCCCTCACGGTCCATCTGATCCATGAGGTCACCAAGGTGTTGCTGGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346178.8
ENST00000356638.8
ENST00000524437.5
ENST00000529737.5
ENST00000534419.1
ENST00000534422.5
ENST00000648273.1
CDS TCA 72 bp CAGCCTCTGTCAACATCCCAGAAGAGAAAGGCAGAATaGTTCAGGGGCCTGGGTTATGAATGCCAATCCTGG +
Preference number: 6 (lower is better)
Translates to: QPLSTSQKRKAE*FRGLGYECQSW
Trigger: CCAGGATTGGCATTCATAACCCAGGCCCCTGAATCATTCTGCCTTTCTCTTCTGGGATGTTGACAGAGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526732.5
CDS TCA 72 bp GAAGAGAAAGGCAGAATGATTCAGGGGCCTGGGTTATaGATGCCAATCCTGGCTCTGTTGCCTCTACTGAGA +
Preference number: 6 (lower is better)
Translates to: EEKGRMIQGPGL*MPILALLPLLR
Trigger: TCTCAGTAGAGGCAACAGAGCCAGGATTGGCATTCATAACCCAGGCCCCTGAATCATTCTGCCTTTCTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526732.5
CDS TCA 72 bp ATGCTTCTGGTAGCTTTGAATGTCATACCACACCTGTaGGTGACAAAAGAGGTAAGATACCGGATCACTCAG +
Preference number: 6 (lower is better)
Translates to: MLLVALNVIPHL*VTKEVRYRITQ
Trigger: CTGAGTGATCCGGTATCTTACCTCTTTTGTCACTCACAGGTGTGGTATGACATTCAAAGCTACCAGAAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531563.1
CDS TCA 72 bp GGACTAAATGTTAAAGCTTGGAGAGGGAACCCACAATaGGCAGATAAGTTTGCAAAGGATGGGGAGAGAAAT +
Preference number: 6 (lower is better)
Translates to: GLNVKAWRGNPQ*ADKFAKDGERN
Trigger: ATTTCTCTCCCCATCCTTTGCAAACTTATCTGCTCATTGTGGGTTCCCTCTCCAAGCTTTAACATTTAGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526732.5