RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GAN (Homo sapiens)

Ensembl gene IDs: ENSG00000261609

Ensembl transcript IDs: ENST00000648349.2, ENST00000648994.2, ENST00000650388.1, ENST00000674788.1

Found 756 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGAGGACCCACACGGAGGGTCCCCACCCGGCTCTGCGGACAGACATaGCAGAGGGCCTGTCACACAAGAGGCCACCGGGCCGAGCACGTC +
Preference number: 1 (lower is better)
Translates to: GGPTRRVPTRLCGQT*QRACHTRGHRAEHV
Trigger: GACGTGCTCGGCCCGGTGGCCTCTTGTGTGACAGGCCCTCTGCCATGTCTGTCCGCAGAGCCGGGTGGGGACCCTCCGTGTGGGTCCTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR GCA 90 bp GAAAGAAGGAAACAAGGGCTGCGCTCCGCTCTGGCGAATGCGAGCTaGAAAGGGACAGAGGAGGACCCACACGGAGGGTCCCCACCCGGC +
Preference number: 1 (lower is better)
Translates to: ERRKQGLRSALANAS*KGTEEDPHGGSPPG
Trigger: GCCGGGTGGGGACCCTCCGTGTGGGTCCTCCTCTGTCCCTTTGCAGCTCGCATTCGCCAGAGCGGAGCGCAGCCCTTGTTTCCTTCTTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR CCA 90 bp GTCCTTGGCGGTGCCTCAGAAGGCACCTGGGTCCAAGTTCTGACCTaGAGCCTTGGGGACAGATCTGACTCTCACAGCCAGGGCCAGCTG +
Preference number: 1 (lower is better)
Translates to: VLGGASEGTWVQVLT*SLGDRSDSHSQGQL
Trigger: CAGCTGGCCCTGGCTGTGAGAGTCAGATCTGTCCCCAAGGCTCCAGGTCAGAACTTGGACCCAGGTGCCTTCTGAGGCACCGCCAAGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR CCA 90 bp TTGGACAAGGGTGACAGTCACATACTCGAGGGTCCAGCACAACACTaGCATGAGCCAACAGGAGCCACGCCGGCCACCTGCTGGGCCAGG +
Preference number: 1 (lower is better)
Translates to: LDKGDSHILEGPAQH*HEPTGATPATCWAR
Trigger: CCTGGCCCAGCAGGTGGCCGGCGTGGCTCCTGTTGGCTCATGCCAGTGTTGTGCTGGACCCTCGAGTATGTGACTGTCACCCTTGTCCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR TCA 90 bp GATGTGTCCTTGGCGGTGCCTCAGAAGGCACCTGGGTCCAAGTTCTaGCCTGGAGCCTTGGGGACAGATCTGACTCTCACAGCCAGGGCC +
Preference number: 1 (lower is better)
Translates to: DVSLAVPQKAPGSKF*PGALGTDLTLTARA
Trigger: GGCCCTGGCTGTGAGAGTCAGATCTGTCCCCAAGGCTCCAGGTCAGAACTTGGACCCAGGTGCCTTCTGAGGCACCGCCAAGGACACATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR CCA 90 bp GCTGGCCTGGAAGGTGTCATTCTAGCCTACAGGTGCCTAAGGCGCTaGGATGTGTCCTTGGCGGTGCCTCAGAAGGCACCTGGGTCCAAG +
Preference number: 1 (lower is better)
Translates to: AGLEGVILAYRCLRR*DVSLAVPQKAPGSK
Trigger: CTTGGACCCAGGTGCCTTCTGAGGCACCGCCAAGGACACATCCCAGCGCCTTAGGCACCTGTAGGCTAGAATGACACCTTCCAGGCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR CCA 90 bp CCTAAGGCGCTGGGATGTGTCCTTGGCGGTGCCTCAGAAGGCACCTaGGTCCAAGTTCTGACCTGGAGCCTTGGGGACAGATCTGACTCT +
Preference number: 1 (lower is better)
Translates to: PKALGCVLGGASEGT*VQVLTWSLGDRSDS
Trigger: AGAGTCAGATCTGTCCCCAAGGCTCCAGGTCAGAACTTGGACCCAGGTGCCTTCTGAGGCACCGCCAAGGACACATCCCAGCGCCTTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR CCA 90 bp TCAGAGCTGAAGAGGAAAGAAGGAAACAAGGGCTGCGCTCCGCTCTaGCGAATGCGAGCTGCAAAGGGACAGAGGAGGACCCACACGGAG +
Preference number: 1 (lower is better)
Translates to: SELKRKEGNKGCAPL*RMRAAKGQRRTHTE
Trigger: CTCCGTGTGGGTCCTCCTCTGTCCCTTTGCAGCTCGCATTCGCCAGAGCGGAGCGCAGCCCTTGTTTCCTTCTTTCCTCTTCAGCTCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR CCA 90 bp AGCATCCGCGATACCGTTTCTGATGAGGACAGGACTCTGCGGAGGTaGGCAGAGCAGGGGGTGCTTTTGTCAGCTCTGCTGGTCACTTCC +
Preference number: 1 (lower is better)
Translates to: SIRDTVSDEDRTLRR*AEQGVLLSALLVTS
Trigger: GGAAGTGACCAGCAGAGCTGACAAAAGCACCCCCTGCTCTGCCCACCTCCGCAGAGTCCTGTCCTCATCAGAAACGGTATCGCGGATGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR GCA 90 bp GCCCCATCAGCAAGGCTACCCACCTACGGAGTGGGAAGGTTGCCGTaGCAACCTCCCCTAGGGCAGGAGAAACAACTGGCATATGTTCAA +
Preference number: 1 (lower is better)
Translates to: APSARLPTYGVGRLP*QPPLGQEKQLAYVQ
Trigger: TTGAACATATGCCAGTTGTTTCTCCTGCCCTAGGGGAGGTTGGCACGGCAACCTTCCCACTCCGTAGGTGGGTAGCCTTGCTGATGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR CCA 90 bp GCCTTGGGGACAGATCTGACTCTCACAGCCAGGGCCAGCTGGTTGTaGAAAGTGCTAGTATGCAGGTCTGCTCAGGGATCTGTGAGGCTC +
Preference number: 1 (lower is better)
Translates to: ALGTDLTLTARASWL*KVLVCRSAQGSVRL
Trigger: GAGCCTCACAGATCCCTGAGCAGACCTGCATACTAGCACTTTCCACAACCAGCTGGCCCTGGCTGTGAGAGTCAGATCTGTCCCCAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR CCA 90 bp CCTGGAGCCTTGGGGACAGATCTGACTCTCACAGCCAGGGCCAGCTaGTTGTGGAAAGTGCTAGTATGCAGGTCTGCTCAGGGATCTGTG +
Preference number: 1 (lower is better)
Translates to: PGALGTDLTLTARAS*LWKVLVCRSAQGSV
Trigger: CACAGATCCCTGAGCAGACCTGCATACTAGCACTTTCCACAACCAGCTGGCCCTGGCTGTGAGAGTCAGATCTGTCCCCAAGGCTCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR TCA 90 bp GGGAGGAGGACAAGACAAAACCATGACAACAATCAGGTCCCTTGGTaGCGACGTGCCCCATCAGCAAGGCTACCCACCTACGGAGTGGGA +
Preference number: 1 (lower is better)
Translates to: GRRTRQNHDNNQVPW*RRAPSARLPTYGVG
Trigger: TCCCACTCCGTAGGTGGGTAGCCTTGCTGATGGGGCACGTCGTCACCAAGGGACCTGATTGTTGTCATGGTTTTGTCTTGTCCTCCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR TCA 90 bp CTGACCCAAGGCGGGTTTTGCTACACTCAGCTGCTCTCTTCTCACTaGCTTCCTGGACTCCAGTGCTCAGTGAGCAGCCAGTGGAAAAGG +
Preference number: 1 (lower is better)
Translates to: LTQGGFCYTQLLSSH*LPGLQCSVSSQWKR
Trigger: CCTTTTCCACTGGCTGCTCACTGAGCACTGGAGTCCAGGAAGTCAGTGAGAAGAGAGCAGCTGAGTGTAGCAAAACCCGCCTTGGGTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR GCA 90 bp CCTCACTGTTCAGCTCCCAGGATGGCAAGCACAGTTCCTAGTGGGTaGTCATCAGACATGTGTTGGCTGACCCAAGGCGGGTTTTGCTAC +
Preference number: 1 (lower is better)
Translates to: PHCSAPRMASTVPSG*SSDMCWLTQGGFCY
Trigger: GTAGCAAAACCCGCCTTGGGTCAGCCAACACATGTCTGATGAGCACCCACTAGGAACTGTGCTTGCCATCCTGGGAGCTGAACAGTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR GCA 90 bp ACGGCAATCCCTAAGCTGGCAGAGAAAGATGCGCCGACTGCGAAGTaGCTGTTTTCTCAGAGATTCCACCTAGCAGTGTCCATGGGGAGC +
Preference number: 1 (lower is better)
Translates to: TAIPKLAEKDAPTAK*LFSQRFHLAVSMGS
Trigger: GCTCCCCATGGACACTGCTAGGTGGAATCTCTGAGAAAACAGGCACTTCGCAGTCGGCGCATCTTTCTCTGCCAGCTTAGGGATTGCCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR GCA 90 bp CACAGCCAGGGCCAGCTGGTTGTGGAAAGTGCTAGTATGCAGGTCTaGTCAGGGATCTGTGAGGCTCATGCTCTGGCCATTATGTGGTCT +
Preference number: 1 (lower is better)
Translates to: HSQGQLVVESASMQV*SGICEAHALAIMWS
Trigger: AGACCACATAATGGCCAGAGCATGAGCCTCACAGATCCCTGAGCAGACCTGCATACTAGCACTTTCCACAACCAGCTGGCCCTGGCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR GCA 90 bp CTGACTCTCACAGCCAGGGCCAGCTGGTTGTGGAAAGTGCTAGTATaGAGGTCTGCTCAGGGATCTGTGAGGCTCATGCTCTGGCCATTA +
Preference number: 1 (lower is better)
Translates to: LTLTARASWLWKVLV*RSAQGSVRLMLWPL
Trigger: TAATGGCCAGAGCATGAGCCTCACAGATCCCTGAGCAGACCTGCATACTAGCACTTTCCACAACCAGCTGGCCCTGGCTGTGAGAGTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR CCA 90 bp CAGGTCTGCTCAGGGATCTGTGAGGCTCATGCTCTGGCCATTATGTaGTCTGAAGAACCAGAAGGGCTATTCTCCTCGCCCCCAACAACC +
Preference number: 1 (lower is better)
Translates to: QVCSGICEAHALAIM*SEEPEGLFSSPPTT
Trigger: GGTTGTTGGGGGCGAGGAGAATAGCCCTTCTGGTTCTTCAGACCACATAATGGCCAGAGCATGAGCCTCACAGATCCCTGAGCAGACCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR CCA 90 bp GCTGCCATCTCTGCTCTCCCTTTCGGAGCTATGTTATGGTGCTCTTaGGTCAGGATCTCGCACTCTGCTCTGCTTCCTCCTCAAGGGGAA +
Preference number: 1 (lower is better)
Translates to: AAISALPFGAMLWCS*VRISHSALLPPQGE
Trigger: TTCCCCTTGAGGAGGAAGCAGAGCAGAGTGCGAGATCCTGACCCAAGAGCACCATAACATAGCTCCGAAAGGGAGAGCAGAGATGGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648349.2
3UTR TCA 90 bp TGGCAAGCACAGTTCCTAGTGGGTGCTCATCAGACATGTGTTGGCTaGCCCAAGGCGGGTTTTGCTACACTCAGCTGCTCTCTTCTCACT +
Preference number: 1 (lower is better)
Translates to: WQAQFLVGAHQTCVG*PKAGFATLSCSLLT
Trigger: AGTGAGAAGAGAGCAGCTGAGTGTAGCAAAACCCGCCTTGGGTCAGCCAACACATGTCTGATGAGCACCCACTAGGAACTGTGCTTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR TCA 90 bp ACGCCGGCCACCTGCTGGGCCAGGGACCACTGCAAAGAGCAGCCCTaGATTTGGGAGGGTCAAATCGAATTTACAAATCTTGTTTTCAGG +
Preference number: 1 (lower is better)
Translates to: TPATCWARDHCKEQP*IWEGQIEFTNLVFR
Trigger: CCTGAAAACAAGATTTGTAAATTCGATTTGACCCTCCCAAATTCAGGGCTGCTCTTTGCAGTGGTCCCTGGCCCAGCAGGTGGCCGGCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR GCA 90 bp TGCAGGAGACCCTTCCCGGCTCCACAGGTACTACCCCAGAAAGGATaGGTGACGTGTCTTGATCTAAGTCAACACAGAAGCGAGCAACTT +
Preference number: 1 (lower is better)
Translates to: CRRPFPAPQVLPQKG*VTCLDLSQHRSEQL
Trigger: AAGTTGCTCGCTTCTGTGTTGACTTAGATCAAGACACGTCACGCATCCTTTCTGGGGTAGTACCTGTGGAGCCGGGAAGGGTCTCCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
3UTR GCA 90 bp TGTGTTTTTAAGTCAGAGCTGAAGAGGAAAGAAGGAAACAAGGGCTaGGCTCCGCTCTGGCGAATGCGAGCTGCAAAGGGACAGAGGAGG +
Preference number: 1 (lower is better)
Translates to: CVFKSELKRKEGNKG*APLWRMRAAKGQRR
Trigger: CCTCCTCTGTCCCTTTGCAGCTCGCATTCGCCAGAGCGGAGCGCAGCCCTTGTTTCCTTCTTTCCTCTTCAGCTCTGACTTAAAAACACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR GCA 90 bp ATAAGCCTTGCTGAAGCTGCAGGCGGAAAAGCTTGCAATTCGCAATaGGTAAGGCTGCACATCCTGTACGGCGAAGGTCGGATGGAAGGA +
Preference number: 1 (lower is better)
Translates to: ISLAEAAGGKACNSQ*VRLHILYGEGRMEG
Trigger: TCCTTCCATCCGACCTTCGCCGTACAGGATGTGCAGCCTTACGCATTGCGAATTGCAAGCTTTTCCGCCTGCAGCTTCAGCAAGGCTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000650388.1
3UTR GCA 90 bp GTTTCAGCTGCCATCTCTGCTCTCCCTTTCGGAGCTATGTTATGGTaGTCTTGGGTCAGGATCTCGCACTCTGCTCTGCTTCCTCCTCAA +
Preference number: 1 (lower is better)
Translates to: VSAAISALPFGAMLW*SWVRISHSALLPPQ
Trigger: TTGAGGAGGAAGCAGAGCAGAGTGCGAGATCCTGACCCAAGAGCACCATAACATAGCTCCGAAAGGGAGAGCAGAGATGGCAGCTGAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648349.2
3UTR CCA 90 bp AGGATGGCAAGCACAGTTCCTAGTGGGTGCTCATCAGACATGTGTTaGCTGACCCAAGGCGGGTTTTGCTACACTCAGCTGCTCTCTTCT +
Preference number: 1 (lower is better)
Translates to: RMASTVPSGCSSDMC*LTQGGFCYTQLLSS
Trigger: AGAAGAGAGCAGCTGAGTGTAGCAAAACCCGCCTTGGGTCAGCCAACACATGTCTGATGAGCACCCACTAGGAACTGTGCTTGCCATCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR CCA 90 bp GTGCTAGTATGCAGGTCTGCTCAGGGATCTGTGAGGCTCATGCTCTaGCCATTATGTGGTCTGAAGAACCAGAAGGGCTATTCTCCTCGC +
Preference number: 1 (lower is better)
Translates to: VLVCRSAQGSVRLML*PLCGLKNQKGYSPR
Trigger: GCGAGGAGAATAGCCCTTCTGGTTCTTCAGACCACATAATGGCCAGAGCATGAGCCTCACAGATCCCTGAGCAGACCTGCATACTAGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR TCA 90 bp AAAAACAACGACTCCGAACATGGCCAAAATACCCTTCCTCCACCTTaGCGGCAATCCCTAAGCTGGCAGAGAAAGATGCGCCGACTGCGA +
Preference number: 1 (lower is better)
Translates to: KNNDSEHGQNTLPPP*RQSLSWQRKMRRLR
Trigger: TCGCAGTCGGCGCATCTTTCTCTGCCAGCTTAGGGATTGCCGTCAAGGTGGAGGAAGGGTATTTTGGCCATGTTCGGAGTCGTTGTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR GCA 90 bp CACGAATACGGAATAAGCCTTGCTGAAGCTGCAGGCGGAAAAGCTTaGAATTCGCAATGCGTAAGGCTGCACATCCTGTACGGCGAAGGT +
Preference number: 1 (lower is better)
Translates to: HEYGISLAEAAGGKA*NSQCVRLHILYGEG
Trigger: ACCTTCGCCGTACAGGATGTGCAGCCTTACGCATTGCGAATTGCAAGCTTTTCCGCCTGCAGCTTCAGCAAGGCTTATTCCGTATTCGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000650388.1
3UTR TCA 90 bp ATGTTTATTGCCTACCTACTCTGTGCAAGCACTGAGACTGGCAGATaGCAAAGACGGGGCCCTTGCCCGTTCCATAGTGGGTTTATGACC +
Preference number: 1 (lower is better)
Translates to: MFIAYLLCASTETGR*QRRGPCPFHSGFMT
Trigger: GGTCATAAACCCACTATGGAACGGGCAAGGGCCCCGTCTTTGTCATCTGCCAGTCTCAGTGCTTGCACAGAGTAGGTAGGCAATAAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR GCA 90 bp TACCATACCAAAGCCCAGCACAGAGTGAGTTTCAGCTGCCATCTCTaGTCTCCCTTTCGGAGCTATGTTATGGTGCTCTTGGGTCAGGAT +
Preference number: 1 (lower is better)
Translates to: YHTKAQHRVSFSCHL*SPFRSYVMVLLGQD
Trigger: ATCCTGACCCAAGAGCACCATAACATAGCTCCGAAAGGGAGAGCAGAGATGGCAGCTGAAACTCACTCTGTGCTGGGCTTTGGTATGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
3UTR CCA 90 bp CAGCTCTGCTGGTCACTTCCAGGCTGCTGGTACACACCCCAACAGTaGCTGCAAAGATTGTTCAAAACTTCTGCTGAGGCCACAATGATT +
Preference number: 1 (lower is better)
Translates to: QLCWSLPGCWYTPQQ*LQRLFKTSAEATMI
Trigger: AATCATTGTGGCCTCAGCAGAAGTTTTGAACAATCTTTGCAGCCACTGTTGGGGTGTGTACCAGCAGCCTGGAAGTGACCAGCAGAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR TCA 90 bp CCCGGCTCCACAGGTACTACCCCAGAAAGGATGCGTGACGTGTCTTaGTCTAAGTCAACACAGAAGCGAGCAACTTCTTTCAGTTCACAT +
Preference number: 1 (lower is better)
Translates to: PGSTGTTPERMRDVS*SKSTQKRATSFSSH
Trigger: ATGTGAACTGAAAGAAGTTGCTCGCTTCTGTGTTGACTTAGATCAAGACACGTCACGCATCCTTTCTGGGGTAGTACCTGTGGAGCCGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
3UTR GCA 90 bp CCAAAGAGTTACCATACCAAAGCCCAGCACAGAGTGAGTTTCAGCTaGCATCTCTGCTCTCCCTTTCGGAGCTATGTTATGGTGCTCTTG +
Preference number: 1 (lower is better)
Translates to: PKSYHTKAQHRVSFS*HLCSPFRSYVMVLL
Trigger: CAAGAGCACCATAACATAGCTCCGAAAGGGAGAGCAGAGATGGCAGCTGAAACTCACTCTGTGCTGGGCTTTGGTATGGTAACTCTTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
3UTR GCA 90 bp GGAGGCCTCTTGAATCATGAACGCCAACATTCTGGAAGGGGATACTaGGGTGTTTCTAGCACTCCTTGGAAGGTTTTTGGAATCCCTGGT +
Preference number: 1 (lower is better)
Translates to: GGLLNHERQHSGRGY*GVSSTPWKVFGIPG
Trigger: ACCAGGGATTCCAAAAACCTTCCAAGGAGTGCTAGAAACACCGCAGTATCCCCTTCCAGAATGTTGGCGTTCATGATTCAAGAGGCCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR GCA 90 bp CTGAAACTGGGCCATTATTACAAGATCTCCCGAGAGGAAGAGTCTTaGCTACAACTGGTGAGCCTCCTCATCTTCTTCCTCCTGACTTGG +
Preference number: 1 (lower is better)
Translates to: LKLGHYYKISREEES*LQLVSLLIFFLLTW
Trigger: CCAAGTCAGGAGGAAGAAGATGAGGAGGCTCACCAGTTGTAGGCAAGACTCTTCCTCTCGGGAGATCTTGTAATAATGGCCCAGTTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR GCA 90 bp GAGCTATGTTATGGTGCTCTTGGGTCAGGATCTCGCACTCTGCTCTaGTTCCTCCTCAAGGGGAATGAACACGAATACGGAATAAGCCTT +
Preference number: 1 (lower is better)
Translates to: ELCYGALGSGSRTLL*FLLKGNEHEYGISL
Trigger: AAGGCTTATTCCGTATTCGTGTTCATTCCCCTTGAGGAGGAAGCAGAGCAGAGTGCGAGATCCTGACCCAAGAGCACCATAACATAGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648349.2
3UTR TCA 90 bp GCTTACAGTCATCACCCAGTTAATCCTCACAACAACCCGCAGAGGTaGGTCCTCCTGCTATTCTTCTTCCACATAAGAAACGGAGCCTTG +
Preference number: 1 (lower is better)
Translates to: AYSHHPVNPHNNPQR*VLLLFFFHIRNGAL
Trigger: CAAGGCTCCGTTTCTTATGTGGAAGAAGAATAGCAGGAGGACTCACCTCTGCGGGTTGTTGTGAGGATTAACTGGGTGATGACTGTAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR GCA 90 bp CGTTCACTTCATCTTAAGGCCGTGTGTCCCCCGGACTCTGTGTGTTaGCATCCTTTTCCACCTGTTCCTTCTCTAATTCATATCACGACT +
Preference number: 1 (lower is better)
Translates to: RSLHLKAVCPPDSVC*HPFPPVPSLIHITT
Trigger: AGTCGTGATATGAATTAGAGAAGGAACAGGTGGAAAAGGATGGCAACACACAGAGTCCGGGGGACACACGGCCTTAAGATGAAGTGAACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR GCA 90 bp AGAAACGGGGAGAAGACACAGCCGGCTAGCTCTGAAGACATGGTGTaGATCCCAGCCTATAAATCTCTAATGATCTTGATCCCGTGTTTC +
Preference number: 1 (lower is better)
Translates to: RNGEKTQPASSEDMV*IPAYKSLMILIPCF
Trigger: GAAACACGGGATCAAGATCATTAGAGATTTATAGGCTGGGATGCACACCATGTCTTCAGAGCTAGCCGGCTGTGTCTTCTCCCCGTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR CCA 90 bp CAGAGATTCCACCTAGCAGTGTCCATGGGGAGCCACAGTGGAACATaGAGAGAACAATCAAGGCTGGTTCAAACGAAAGGTTATTCACCA +
Preference number: 1 (lower is better)
Translates to: QRFHLAVSMGSHSGT*REQSRLVQTKGYSP
Trigger: TGGTGAATAACCTTTCGTTTGAACCAGCCTTGATTGTTCTCTCCATGTTCCACTGTGGCTCCCCATGGACACTGCTAGGTGGAATCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR TCA 90 bp TCTAGCACTCCTTGGAAGGTTTTTGGAATCCCTGGTTTGGTACACTaGGGTAGGAATGTACCAAAGGGAACTCTAATGGACCACAGCAGC +
Preference number: 1 (lower is better)
Translates to: SSTPWKVFGIPGLVH*GRNVPKGTLMDHSS
Trigger: GCTGCTGTGGTCCATTAGAGTTCCCTTTGGTACATTCCTACCTCAGTGTACCAAACCAGGGATTCCAAAAACCTTCCAAGGAGTGCTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR GCA 90 bp CCTCACTGGCTGACTGGTGAGCTGATAATCCAAAGACCTGGCTTCTaGTTTTGGTTCTTGCTCCTCCCTAAAGTGAGAAATGAAGCCATA +
Preference number: 1 (lower is better)
Translates to: PHWLTGELIIQRPGF*FWFLLLPKVRNEAI
Trigger: TATGGCTTCATTTCTCACTTTAGGGAGGAGCAAGAACCAAAAGCAGAAGCCAGGTCTTTGGATTATCAGCTCACCAGTCAGCCAGTGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR TCA 90 bp GCCTTTGTTCTCATGGAAATCACTTCCAGGAAATGTCTCATGTCCTaGGCTAAGTCAGTCTCATGTCCTGAGCTAAGTCAACAGGGTGCT +
Preference number: 1 (lower is better)
Translates to: AFVLMEITSRKCLMS*AKSVSCPELSQQGA
Trigger: AGCACCCTGTTGACTTAGCTCAGGACATGAGACTGACTTAGCTCAGGACATGAGACATTTCCTGGAAGTGATTTCCATGAGAACAAAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR CCA 90 bp TGGCTGACTGGTGAGCTGATAATCCAAAGACCTGGCTTCTGCTTTTaGTTCTTGCTCCTCCCTAAAGTGAGAAATGAAGCCATATCTATC +
Preference number: 1 (lower is better)
Translates to: WLTGELIIQRPGFCF*FLLLPKVRNEAISI
Trigger: GATAGATATGGCTTCATTTCTCACTTTAGGGAGGAGCAAGAACCAAAAGCAGAAGCCAGGTCTTTGGATTATCAGCTCACCAGTCAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR TCA 90 bp ATCACTGAACTCCTCCATTTAAGTAGAATGTGTACAACTGTGCCCTaGAACTGGGCCATTATTACAAGATCTCCCGAGAGGAAGAGTCTT +
Preference number: 1 (lower is better)
Translates to: ITELLHLSRMCTTVP*NWAIITRSPERKSL
Trigger: AAGACTCTTCCTCTCGGGAGATCTTGTAATAATGGCCCAGTTTCAGGGCACAGTTGTACACATTCTACTTAAATGGAGGAGTTCAGTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR TCA 90 bp AATTCACCAACCAGAAGACAGATGAACCTCCGTTTGGGATGTGAATaGTTTGAAATGGCCGTTCATTTACGTGGATCCTATTCAGTGTCT +
Preference number: 1 (lower is better)
Translates to: NSPTRRQMNLRLGCE*FEMAVHLRGSYSVS
Trigger: AGACACTGAATAGGATCCACGTAAATGAACGGCCATTTCAAATCATTCACATCCCAAACGGAGGTTCATCTGTCTTCTGGTTGGTGAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR TCA 90 bp AACTGGATGTCAGTTACTGTTTTAATGTTCCCCAATTACAGCTGCTaGATGCCAAGGTACTGTTCTGTACAGGACATTTCACCAAAGCAA +
Preference number: 1 (lower is better)
Translates to: NWMSVTVLMFPNYSC*MPRYCSVQDISPKQ
Trigger: TTGCTTTGGTGAAATGTCCTGTACAGAACAGTACCTTGGCATTCAGCAGCTGTAATTGGGGAACATTAAAACAGTAACTGACATCCAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
3UTR GCA 90 bp ACCTTAATTTGTTGGGCAGGGTTAGGCATAATATATCCTTCCAAGTaGAGTGGAAAAGCAGTCTTGGCATGTTTGGATATGTTGATTTGC +
Preference number: 1 (lower is better)
Translates to: TLICWAGLGIIYPSK*SGKAVLACLDMLIC
Trigger: GCAAATCAACATATCCAAACATGCCAAGACTGCTTTTCCACTGCACTTGGAAGGATATATTATGCCTAACCCTGCCCAACAAATTAAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
3UTR GCA 90 bp AAAACAGGCCTTAGAGAATTGTATTCCTCAAGGCCTCTGACTGCCTaGTTCCAAGCTTTTGTTAAAGAACAGAATGTGTTGAATTCTTCT +
Preference number: 1 (lower is better)
Translates to: KTGLRELYSSRPLTA*FQAFVKEQNVLNSS
Trigger: AGAAGAATTCAACACATTCTGTTCTTTAACAAAAGCTTGGAAGCAGGCAGTCAGAGGCCTTGAGGAATACAATTCTCTAAGGCCTGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR TCA 90 bp TTGATTTGCATATACGGATTTTGTTTGTTACCAAAGCTACGTATTTaGATACAGCAGTCAGACATGAGTTCCCTTCAGGGAAAATGCACC +
Preference number: 1 (lower is better)
Translates to: LICIYGFCLLPKLRI*IQQSDMSSLQGKCT
Trigger: GGTGCATTTTCCCTGAAGGGAACTCATGTCTGACTGCTGTATTCAAATACGTAGCTTTGGTAACAAACAAAATCCGTATATGCAAATCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
3UTR CCA 90 bp AATTTGTTGGGCAGGGTTAGGCATAATATATCCTTCCAAGTGCAGTaGAAAAGCAGTCTTGGCATGTTTGGATATGTTGATTTGCATATA +
Preference number: 1 (lower is better)
Translates to: NLLGRVRHNISFQVQ*KSSLGMFGYVDLHI
Trigger: TATATGCAAATCAACATATCCAAACATGCCAAGACTGCTTTTCCACTGCACTTGGAAGGATATATTATGCCTAACCCTGCCCAACAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
3UTR TCA 90 bp CTTCCAAGTGCAGTGGAAAAGCAGTCTTGGCATGTTTGGATATGTTaGTTTGCATATACGGATTTTGTTTGTTACCAAAGCTACGTATTT +
Preference number: 1 (lower is better)
Translates to: LPSAVEKQSWHVWIC*FAYTDFVCYQSYVF
Trigger: AAATACGTAGCTTTGGTAACAAACAAAATCCGTATATGCAAATCAACATATCCAAACATGCCAAGACTGCTTTTCCACTGCACTTGGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
3UTR TCA 90 bp AAAAATAGTATCCTCAAGCACCCAAATCCCAAATACTGGGTCAGATaGCAGATAGACACATTTTCTTGTCTGATGCTAACAAGAATGGAA +
Preference number: 1 (lower is better)
Translates to: KNSILKHPNPKYWVR*QIDTFSCLMLTRME
Trigger: TTCCATTCTTGTTAGCATCAGACAAGAAAATGTGTCTATCTGTCATCTGACCCAGTATTTGGGATTTGGGTGCTTGAGGATACTATTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR TCA 90 bp AGAATTGTGTTGAATTTAAATACTAGAGATGTAGATGGAGAGAGGTaGTATGGGTCTAGAAAGCAAATCATTTTCTGGCTGGATGCTCAC +
Preference number: 1 (lower is better)
Translates to: RIVLNLNTRDVDGER*YGSRKQIIFWLDAH
Trigger: GTGAGCATCCAGCCAGAAAATGATTTGCTTTCTAGACCCATATCACCTCTCTCCATCTACATCTCTAGTATTTAAATTCAACACAATTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR GCA 90 bp AAGGTACAAAAGTTCCACACACACAGACACATGCACAAACACACATaGACGTACACACAAGTACTTGTAACACATATTTGTTTGTTTTTA +
Preference number: 1 (lower is better)
Translates to: KVQKFHTHRHMHKHT*TYTQVLVTHICLFL
Trigger: TAAAAACAAACAAATATGTGTTACAAGTACTTGTGTGTACGTGCATGTGTGTTTGTGCATGTGTCTGTGTGTGTGGAACTTTTGTACCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR CCA 90 bp GCATATAAGATAAAAACCTTACACCTTCTCTTATCAGGTATCTTCTaGCTAAAATGGAGAGTTAATGTACCACACTCAACACTCTCTAGA +
Preference number: 1 (lower is better)
Translates to: AYKIKTLHLLLSGIF*LKWRVNVPHSTLSR
Trigger: TCTAGAGAGTGTTGAGTGTGGTACATTAACTCTCCATTTTAGCCAGAAGATACCTGATAAGAGAAGGTGTAAGGTTTTTATCTTATATGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
3UTR CCA 90 bp GCAGGTCCCATGTCAGAAAACACAGATATGTTCAACAGATTGGTGTaGTATTTATATGGTATTCGTGGCATTTTCCTTATAGTATTCAAA +
Preference number: 1 (lower is better)
Translates to: AGPMSENTDMFNRLV*YLYGIRGIFLIVFK
Trigger: TTTGAATACTATAAGGAAAATGCCACGAATACCATATAAATACCACACCAATCTGTTGAACATATCTGTGTTTTCTGACATGGGACCTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR-3UTR GCA 90 bp TTGCAAGTTACCATCTCGCTACCCTGGGCGTCCTCACGACTTCGGACTCCCCCAAGCATCGCCTCCCCTTaGTGCGGCTGGCTGAGCGGT +
Preference number: 2 (lower is better)
Translates to: LQVTISLPWASSRLRTPPSIASP*CGWLSG
Trigger: ACCGCTCAGCCAGCCGCAGCAAGGGGAGGCGATGCT...TGGGGGAGTCCGAAGTCGTGAGGACGCCCAGGGTAGCGAGATGGTAACTTGCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000650388.1
3UTR CAA 90 bp CGACGTGCCCCATCAGCAAGGCTACCCACCTACGGAGTGGGAAGGTaGCCGTGCCAACCTCCCCTAGGGCAGGAGAAACAACTGGCATAT +
Preference number: 2 (lower is better)
Translates to: RRAPSARLPTYGVGR*PCQPPLGQEKQLAY
Trigger: ATATGCCAGTTGTTTCTCCTGCCCTAGGGGAGGTTGGCACGGCAACCTTCCCACTCCGTAGGTGGGTAGCCTTGCTGATGGGGCACGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR-3UTR GCA 90 bp AAGGCTGCACATCCTGTACGGCGAAGGTCGGATGGAAGGAGTGGTTTAGTGTGGAGCATCGCCTCCCCTTaGTGCGGCTGGCTGAGCGGT +
Preference number: 2 (lower is better)
Translates to: KAAHPVRRRSDGRSGLVWSIASP*CGWLSG
Trigger: ACCGCTCAGCCAGCCGCAGCAAGGGGAGGCGATGCT...CCACACTAAACCACTCCTTCCATCCGACCTTCGCCGTACAGGATGTGCAGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000650388.1
3UTR CAA 90 bp GGAGCCTTGGGGACAGATCTGACTCTCACAGCCAGGGCCAGCTGGTaGTGGAAAGTGCTAGTATGCAGGTCTGCTCAGGGATCTGTGAGG +
Preference number: 2 (lower is better)
Translates to: GALGTDLTLTARASW*WKVLVCRSAQGSVR
Trigger: CCTCACAGATCCCTGAGCAGACCTGCATACTAGCACTTTCCACAACCAGCTGGCCCTGGCTGTGAGAGTCAGATCTGTCCCCAAGGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR-3UTR GCA 90 bp TGCACATCCTGTACGGCGAAGGTCGGATGGAAGGAGTGGTTTAGTGTGGTGCCAATCGCCTCCCCTTGCTaGGGCTGGCTGAGCGGTATA +
Preference number: 2 (lower is better)
Translates to: CTSCTAKVGWKEWFSVVPIASPC*GWLSGI
Trigger: TATACCGCTCAGCCAGCCGCAGCAAGGGGAGGCGAT...TGGCACCACACTAAACCACTCCTTCCATCCGACCTTCGCCGTACAGGATGTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000650388.1
3UTR-3UTR GCA 90 bp AAGGCTGCACATCCTGTACGGCGAAGGTCGGATGGAAGGAGTGGTTTAGTGTGGCACCAACAGTCACGATaGACTCAGAGTAGCCCCGGG +
Preference number: 2 (lower is better)
Translates to: KAAHPVRRRSDGRSGLVWHQQSR*TQSSPG
Trigger: CCCGGGGCTACTCTGAGTGCATCGTGACTGTTGGTG...CCACACTAAACCACTCCTTCCATCCGACCTTCGCCGTACAGGATGTGCAGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000650388.1
3UTR-3UTR CCA 90 bp ACTTCTTTACTTCTTAAGCTGATGATACCCTTTTGCCCGCCCCATGTACCAGATCCTGCCCTCCCGGCTTaGAGGGGGAGCCCTGAGGGC +
Preference number: 2 (lower is better)
Translates to: TSLLLKLMIPFCPPHVPDPALPA*RGSPEG
Trigger: GCCCTCAGGGCTCCCCCTCCAAGCCGGGAGGGCAGG...ATCTGGTACATGGGGCGGGCAAAAGGGTATCATCAGCTTAAGAAGTAAAGAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR CAA 90 bp AGCTGCCATCTCTGCTCTCCCTTTCGGAGCTATGTTATGGTGCTCTaGGGTCAGGATCTCGCACTCTGCTCTGCTTCCTCCTCAAGGGGA +
Preference number: 2 (lower is better)
Translates to: SCHLCSPFRSYVMVL*GQDLALCSASSSRG
Trigger: TCCCCTTGAGGAGGAAGCAGAGCAGAGTGCGAGATCCTGACCCAAGAGCACCATAACATAGCTCCGAAAGGGAGAGCAGAGATGGCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648349.2
3UTR-3UTR TCA 90 bp GACTCCCCCAAACACATACAGCTCCATAGCAACTCCACAGGCCACCGCTCCAAACTTGCTGCGGCTGGCTaGGCGGTATATTGCTACACT +
Preference number: 2 (lower is better)
Translates to: DSPKHIQLHSNSTGHRSKLAAAG*AVYCYT
Trigger: AGTGTAGCAATATACCGCTCAGCCAGCCGCAGCAAG...TTTGGAGCGGTGGCCTGTGGAGTTGCTATGGAGCTGTATGTGTTTGGGGGAGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000650388.1
3UTR-3UTR GCA 90 bp AAAGCTTGCAATTCGCAATGCGTAAGGCTGCACATCCTGTACGGCGAAGGTCGGAAGGCAGAATGGCACTaGAGGAGACCCTTCCCGGCT +
Preference number: 2 (lower is better)
Translates to: KACNSQCVRLHILYGEGRKAEWH*RRPFPA
Trigger: AGCCGGGAAGGGTCTCCTGCAGTGCCATTCTGCCTT...CCGACCTTCGCCGTACAGGATGTGCAGCCTTACGCATTGCGAATTGCAAGCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648349.2
3UTR-3UTR GCA 90 bp AGCTGGTTGTGGAAAGTGCTAGTATGCAGGTCTGCTCAGGGATCTGTGAGGCTCAAGGCAGAATGGCACTaGAGGAGACCCTTCCCGGCT +
Preference number: 2 (lower is better)
Translates to: SWLWKVLVCRSAQGSVRLKAEWH*RRPFPA
Trigger: AGCCGGGAAGGGTCTCCTGCAGTGCCATTCTGCCTT...GAGCCTCACAGATCCCTGAGCAGACCTGCATACTAGCACTTTCCACAACCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR-3UTR GCA 90 bp ACTTCTTTACTTCTTAAGCTGATGATACCCTTTTGCCCGCCCCATGTACCAGATAGCGGGGCCTGTGCCTaGCTGCCCTCCCGGCTTGGA +
Preference number: 2 (lower is better)
Translates to: TSLLLKLMIPFCPPHVPDSGACA*LPSRLG
Trigger: TCCAAGCCGGGAGGGCAGGCAGGCACAGGCCCCGCT...ATCTGGTACATGGGGCGGGCAAAAGGGTATCATCAGCTTAAGAAGTAAAGAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR-3UTR CCA 90 bp CTTGCAAGTTACCATCTCGCTACCCTGGGCGTCCTCACGACTTCGGACTCCCCCACAGCCACATTTAACTaGAGGAACTCACTCCTCCCA +
Preference number: 2 (lower is better)
Translates to: LASYHLATLGVLTTSDSPTATFN*RNSLLP
Trigger: TGGGAGGAGTGAGTTCCTCCAGTTAAATGTGGCTGT...GGGGGAGTCCGAAGTCGTGAGGACGCCCAGGGTAGCGAGATGGTAACTTGCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648349.2
3UTR-3UTR TCA 90 bp AAGGCTGCACATCCTGTACGGCGAAGGTCGGATGGAAGGAGTGGTTTAGTGTGGAAGCCCAGCACAGAGTaGGTTTCAGCTGCCATCTCT +
Preference number: 2 (lower is better)
Translates to: KAAHPVRRRSDGRSGLVWKPSTE*VSAAIS
Trigger: AGAGATGGCAGCTGAAACTCACTCTGTGCTGGGCTT...CCACACTAAACCACTCCTTCCATCCGACCTTCGCCGTACAGGATGTGCAGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648349.2
3UTR-3UTR TCA 90 bp AACACTCTACAGACTCAAAAAGCTTTCCGTAGGAGCCTCCACCCATGGCGTAGAAGTAGCCCCGGGGTTTaGAGTTGGCCAGCATCGCCT +
Preference number: 2 (lower is better)
Translates to: NTLQTQKAFRRSLHPWRRSSPGV*SWPASP
Trigger: AGGCGATGCTGGCCAACTTCAAACCCCGGGGCTACT...TCTACGCCATGGGTGGAGGCTCCTACGGAAAGCTTTTTGAGTCTGTAGAGTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000650388.1
3UTR-3UTR CCA 90 bp ACAGTTCCTAGTGGGTGCTCATCAGACATGTGTTGGCTGACCCAAGGCGGGTTTGCGGCACATCTGGCCTaGTGCCTCTGGCATATAAGA +
Preference number: 2 (lower is better)
Translates to: TVPSGCSSDMCWLTQGGFAAHLA*CLWHIR
Trigger: TCTTATATGCCAGAGGCACCAGGCCAGATGTGCCGC...AAACCCGCCTTGGGTCAGCCAACACATGTCTGATGAGCACCCACTAGGAACTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR-3UTR TCA 90 bp CCCCATAGGCACAGCATCTTTCAGCAACTTTTGACGCATTGTACTGACTTCCAGAGTAGCCCCGGGGTTTaGAGTTGGCCAGCATCGCCT +
Preference number: 2 (lower is better)
Translates to: PHRHSIFQQLLTHCTDFQSSPGV*SWPASP
Trigger: AGGCGATGCTGGCCAACTTCAAACCCCGGGGCTACT...CTGGAAGTCAGTACAATGCGTCAAAAGTTGCTGAAAGATGCTGTGCCTATGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000648349.2
3UTR-3UTR GCA 90 bp CTTGCAAGTTACCATCTCGCTACCCTGGGCGTCCTCACGACTTCGGACTCCCCCAGTTCACATGAGGGCTaGAACCTGACTCATCAATTT +
Preference number: 2 (lower is better)
Translates to: LASYHLATLGVLTTSDSPSSHEG*NLTHQF
Trigger: AAATTGATGAGTCAGGTTGCAGCCCTCATGTGAACT...GGGGGAGTCCGAAGTCGTGAGGACGCCCAGGGTAGCGAGATGGTAACTTGCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648349.2
3UTR-3UTR TCA 90 bp GACTTGCAAGTTACCATCTCGCTACCCTGGGCGTCCTCACGACTTCGGACTCCCCCAAAGCTACGTATTTaGATACAGCAGTCAGACATG +
Preference number: 2 (lower is better)
Translates to: DLQVTISLPWASSRLRTPPKLRI*IQQSDM
Trigger: CATGTCTGACTGCTGTATTCAAATACGTAGCTTTGG...GGGAGTCCGAAGTCGTGAGGACGCCCAGGGTAGCGAGATGGTAACTTGCAAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648349.2
3UTR-3UTR TCA 90 bp ACTGGCTCCTATAGGTACAGCTCCATAAACAAAAGAGGAACTGGCGGGGATGCACTTGCTGCGGCTGGCTaGGCGGTATATTGCTACACT +
Preference number: 2 (lower is better)
Translates to: TGSYRYSSINKRGTGGDALAAAG*AVYCYT
Trigger: AGTGTAGCAATATACCGCTCAGCCAGCCGCAGCAAG...TGCATCCCCGCCAGTTCCTCTTTTGTTTATGGAGCTGTACCTATAGGAGCCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000650388.1
3UTR-3UTR TCA 90 bp TGCACATCCTGTACGGCGAAGGTCGGATGGAAGGAGTGGTTTAGTGTGGTGCCAAGCAGCCGATCTTTCTaGCCATGGTCAAATCAGGTT +
Preference number: 2 (lower is better)
Translates to: CTSCTAKVGWKEWFSVVPSSRSF*PWSNQV
Trigger: AACCTGATTTGACCATGGTCAGAAAGATCGGCTGCT...TGGCACCACACTAAACCACTCCTTCCATCCGACCTTCGCCGTACAGGATGTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000650388.1
3UTR-3UTR GCA 90 bp ATAAGCCTTGCTGAAGCTGCAGGCGGAAAAGCTTGCAATTCGCAATGCGTAAGGCATAGAGAGGGCACATaGATCGCATCGCTGCTGTGG +
Preference number: 2 (lower is better)
Translates to: ISLAEAAGGKACNSQCVRHREGT*IASLLW
Trigger: CCACAGCAGCGATGCGATGCATGTGCCCTCTCTATG...CCTTACGCATTGCGAATTGCAAGCTTTTCCGCCTGCAGCTTCAGCAAGGCTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000650388.1
3UTR-3UTR CCA 90 bp AGGCGGAAAAGCTTGCAATTCGCAATGCGTAAGGCTGCACATCCTGTACGGCGAATCGCATCGCTGCTGTaGGTTTCCGTGAAACTCTCT +
Preference number: 2 (lower is better)
Translates to: RRKSLQFAMRKAAHPVRRIASLL*VSVKLS
Trigger: AGAGAGTTTCACGGAAACCCACAGCAGCGATGCGAT...TCGCCGTACAGGATGTGCAGCCTTACGCATTGCGAATTGCAAGCTTTTCCGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000650388.1
3UTR-3UTR CCA 90 bp CTCTCCCTTTCGGAGCTATGTTATGGTGCTCTTGGGTCAGGATCTCGCACTCTGAGGAGTGGTTTAGTGTaGTGCCAGGTTCCTGTGCTT +
Preference number: 2 (lower is better)
Translates to: LSLSELCYGALGSGSRTLRSGLV*CQVPVL
Trigger: AAGCACAGGAACCTGGCACCACACTAAACCACTCCT...CAGAGTGCGAGATCCTGACCCAAGAGCACCATAACATAGCTCCGAAAGGGAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648349.2
3UTR-3UTR TCA 90 bp ACAGTTCCTAGTGGGTGCTCATCAGACATGTGTTGGCTGACCCAAGGCGGGTTTCCTGGTTTGGTACACTaGGGTAGGAATGTACCAAAG +
Preference number: 2 (lower is better)
Translates to: TVPSGCSSDMCWLTQGGFPGLVH*GRNVPK
Trigger: CTTTGGTACATTCCTACCTCAGTGTACCAAACCAGG...AAACCCGCCTTGGGTCAGCCAACACATGTCTGATGAGCACCCACTAGGAACTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR-3UTR TCA 90 bp AAAGCTTGCAATTCGCAATGCGTAAGGCTGCACATCCTGTACGGCGAAGGTCGGAGCAGGTCAGCTGCCTaGACAACATCTTGGATTGTA +
Preference number: 2 (lower is better)
Translates to: KACNSQCVRLHILYGEGRSRSAA*TTSWIV
Trigger: TACAATCCAAGATGTTGTTCAGGCAGCTGACCTGCT...CCGACCTTCGCCGTACAGGATGTGCAGCCTTACGCATTGCGAATTGCAAGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648349.2
3UTR-3UTR GCA 90 bp ATGCATCGCATCGCTGCTGTGGGTTTCCGTGAAACTCTCTCTTCTCCACCAACAGGAGCTATGTTATGGTaGTCTTGGGTCAGGATCTCG +
Preference number: 2 (lower is better)
Translates to: MHRIAAVGFRETLSSPPTGAMLW*SWVRIS
Trigger: CGAGATCCTGACCCAAGAGCACCATAACATAGCTCC...TGTTGGTGGAGAAGAGAGAGTTTCACGGAAACCCACAGCAGCGATGCGATGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648349.2
3UTR-3UTR GCA 90 bp GCTGCAGGCGGAAAAGCTTGCAATTCGCAATGCGTAAGGCTGCACATCCTGTACAGAGTGAGTTTCAGCTaGCATCTCTGCTCTCCCTTT +
Preference number: 2 (lower is better)
Translates to: AAGGKACNSQCVRLHILYRVSFS*HLCSPF
Trigger: AAAGGGAGAGCAGAGATGGCAGCTGAAACTCACTCT...GTACAGGATGTGCAGCCTTACGCATTGCGAATTGCAAGCTTTTCCGCCTGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648349.2
3UTR-3UTR CCA 90 bp CTCTCCCTTTCGGAGCTATGTTATGGTGCTCTTGGGTCAGGATCTCGCACTCTGTTCGGAGCTATGTTATaGTGCTCTTGGGTCAGGATC +
Preference number: 2 (lower is better)
Translates to: LSLSELCYGALGSGSRTLFGAML*CSWVRI
Trigger: GATCCTGACCCAAGAGCACCATAACATAGCTCCGAA...CAGAGTGCGAGATCCTGACCCAAGAGCACCATAACATAGCTCCGAAAGGGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
3UTR CAA 90 bp TCACTTCCAGGCTGCTGGTACACACCCCAACAGTGGCTGCAAAGATaGTTCAAAACTTCTGCTGAGGCCACAATGATTACGGGATGGTTG +
Preference number: 2 (lower is better)
Translates to: SLPGCWYTPQQWLQR*FKTSAEATMITGWL
Trigger: CAACCATCCCGTAATCATTGTGGCCTCAGCAGAAGTTTTGAACAATCTTTGCAGCCACTGTTGGGGTGTGTACCAGCAGCCTGGAAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR CAA 90 bp GCCTCCCCTTGCTGCGGCTGGCTGAGCGGTATATTGCTACACTCTTaGACAATTTCTCGTACTAATGGTTCATTCAGCATCTGTTCCCGT +
Preference number: 2 (lower is better)
Translates to: ASPCCGWLSGILLHS*TISRTNGSFSICSR
Trigger: ACGGGAACAGATGCTGAATGAACCATTAGTACGAGAAATTGTCAAAGAGTGTAGCAATATACCGCTCAGCCAGCCGCAGCAAGGGGAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000650388.1
3UTR-3UTR TCA 90 bp AAAGCTTGCAATTCGCAATGCGTAAGGCTGCACATCCTGTACGGCGAAGGTCGGAATGGTTTTGCTCATTaGGAAGGCAGAATGGCACTG +
Preference number: 2 (lower is better)
Translates to: KACNSQCVRLHILYGEGRNGFAH*EGRMAL
Trigger: CAGTGCCATTCTGCCTTCTCAATGAGCAAAACCATT...CCGACCTTCGCCGTACAGGATGTGCAGCCTTACGCATTGCGAATTGCAAGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648349.2
3UTR-3UTR TCA 90 bp AAGATCTCCCGAGAGGAAGAGTCTTGCCTACAACTGGTGAGCCTCCTCATCTTCCCGGCATCTTTAAATTaGTACAGTCAAAGCGCCACC +
Preference number: 2 (lower is better)
Translates to: KISREEESCLQLVSLLIFPASLN*YSQSAT
Trigger: GGTGGCGCTTTGACTGTATCAATTTAAAGATGCCGG...GAAGATGAGGAGGCTCACCAGTTGTAGGCAAGACTCTTCCTCTCGGGAGATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR-3UTR GCA 90 bp GAACCCCATAGGCACAGCATCTTTCAGCAACTTTTGACGCATTGTACTGACTTCCATAGAGAGGGCACATaGATCGCATCGCTGCTGTGG +
Preference number: 2 (lower is better)
Translates to: EPHRHSIFQQLLTHCTDFHREGT*IASLLW
Trigger: CCACAGCAGCGATGCGATGCATGTGCCCTCTCTATG...GAAGTCAGTACAATGCGTCAAAAGTTGCTGAAAGATGCTGTGCCTATGGGGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648349.2
3UTR-3UTR GCA 90 bp GACTTGCAAGTTACCATCTCGCTACCCTGGGCGTCCTCACGACTTCGGACTCCCTGCTGTCCATGTATTTaGATCTGGATCATACTTTTC +
Preference number: 2 (lower is better)
Translates to: DLQVTISLPWASSRLRTPCCPCI*IWIILF
Trigger: GAAAAGTATGATCCAGATGCAAATACATGGACAGCA...GGGAGTCCGAAGTCGTGAGGACGCCCAGGGTAGCGAGATGGTAACTTGCAAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000650388.1
3UTR-3UTR GCA 90 bp AAGGCTGCACATCCTGTACGGCGAAGGTCGGATGGAAGGAGTGGTTTAGTGTGGGTTCATAGGTGGCAATaGTGTCCATGTATTTGCATC +
Preference number: 2 (lower is better)
Translates to: KAAHPVRRRSDGRSGLVWVHRWQ*CPCICI
Trigger: GATGCAAATACATGGACAGCATTGCCACCTATGAAC...CCACACTAAACCACTCCTTCCATCCGACCTTCGCCGTACAGGATGTGCAGCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000650388.1
3UTR-3UTR GCA 90 bp GCTGCAGGCGGAAAAGCTTGCAATTCGCAATGCGTAAGGCTGCACATCCTGTACTCCGAAGTTATGTCTTaGCTCGTTCATAGGTGGCAA +
Preference number: 2 (lower is better)
Translates to: AAGGKACNSQCVRLHILYSEVMS*LVHRWQ
Trigger: TTGCCACCTATGAACGAGGCAAGACATAACTTCGGA...GTACAGGATGTGCAGCCTTACGCATTGCGAATTGCAAGCTTTTCCGCCTGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000650388.1
3UTR-3UTR CCA 90 bp GCTGCAGGCGGAAAAGCTTGCAATTCGCAATGCGTAAGGCTGCACATCCTGTACAGGAGCCTCCACCCATaGCGTAGATTTTCTTTTTCA +
Preference number: 2 (lower is better)
Translates to: AAGGKACNSQCVRLHILYRSLHP*RRFSFS
Trigger: TGAAAAAGAAAATCTACGCCATGGGTGGAGGCTCCT...GTACAGGATGTGCAGCCTTACGCATTGCGAATTGCAAGCTTTTCCGCCTGCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000650388.1
3UTR-3UTR CCA 90 bp ACTGGCTCCTATAGGTACAGCTCCATAAACAAAAGAGGAACTGGCGGGGATGCATCCACTGCTGGGTCCTaGGATCATAACACTCTACAG +
Preference number: 2 (lower is better)
Translates to: TGSYRYSSINKRGTGGDASTAGS*DHNTLQ
Trigger: CTGTAGAGTGTTATGATCCCAGGACCCAGCAGTGGA...TGCATCCCCGCCAGTTCCTCTTTTGTTTATGGAGCTGTACCTATAGGAGCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000650388.1
3UTR CAA 90 bp CTGGAAGGGGATACTGCGGTGTTTCTAGCACTCCTTGGAAGGTTTTaGGAATCCCTGGTTTGGTACACTGAGGTAGGAATGTACCAAAGG +
Preference number: 2 (lower is better)
Translates to: LEGDTAVFLALLGRF*ESLVWYTEVGMYQR
Trigger: CCTTTGGTACATTCCTACCTCAGTGTACCAAACCAGGGATTCCAAAAACCTTCCAAGGAGTGCTAGAAACACCGCAGTATCCCCTTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR-3UTR TCA 90 bp AGCTGGTTGTGGAAAGTGCTAGTATGCAGGTCTGCTCAGGGATCTGTGAGGCTCTCTTTCAGCAACTTTTaGCGCATTGTACTGACTTCC +
Preference number: 2 (lower is better)
Translates to: SWLWKVLVCRSAQGSVRLSFSNF*RIVLTS
Trigger: GGAAGTCAGTACAATGCGTCAAAAGTTGCTGAAAGA...GAGCCTCACAGATCCCTGAGCAGACCTGCATACTAGCACTTTCCACAACCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR-3UTR GCA 90 bp CAGCTGCTGAATGCCAAGGTACTGTTCTGTACAGGACATTTCACCAAAGCAAATCAGGATCTCGCACTCTaGTCTGCTTCCTCCTCAAGG +
Preference number: 2 (lower is better)
Translates to: QLLNAKVLFCTGHFTKANQDLAL*SASSSR
Trigger: CCTTGAGGAGGAAGCAGAGCAGAGTGCGAGATCCTG...ATTTGCTTTGGTGAAATGTCCTGTACAGAACAGTACCTTGGCATTCAGCAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648349.2
3UTR-3UTR TCA 90 bp AAGATCTCCCGAGAGGAAGAGTCTTGCCTACAACTGGTGAGCCTCCTCATCTTCATGAGGGCTGCAACCTaGCTCATCAATTTACTGAAT +
Preference number: 2 (lower is better)
Translates to: KISREEESCLQLVSLLIFMRAAT*LINLLN
Trigger: ATTCAGTAAATTGATGAGTCAGGTTGCAGCCCTCAT...GAAGATGAGGAGGCTCACCAGTTGTAGGCAAGACTCTTCCTCTCGGGAGATCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR-3UTR TCA 90 bp AGCTGGTTGTGGAAAGTGCTAGTATGCAGGTCTGCTCAGGGATCTGTGAGGCTCGTGGGAGAACGTAAGTaGTGTTTTTCATATGCATGT +
Preference number: 2 (lower is better)
Translates to: SWLWKVLVCRSAQGSVRLVGERK*CFSYAC
Trigger: ACATGCATATGAAAAACATCACTTACGTTCTCCCAC...GAGCCTCACAGATCCCTGAGCAGACCTGCATACTAGCACTTTCCACAACCAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR-3UTR TCA 90 bp CCCCATAGGCACAGCATCTTTCAGCAACTTTTGACGCATTGTACTGACTTCCAGCCCAATTACAGCTGCTaGATGCCAAGGTACTGTTCT +
Preference number: 2 (lower is better)
Translates to: PHRHSIFQQLLTHCTDFQPNYSC*MPRYCS
Trigger: AGAACAGTACCTTGGCATTCAGCAGCTGTAATTGGG...CTGGAAGTCAGTACAATGCGTCAAAAGTTGCTGAAAGATGCTGTGCCTATGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
3UTR-3UTR GCA 90 bp AGCTGGTTGTGGAAAGTGCTAGTATGCAGGTCTGCTCAGGGATCTGTGAGGCTCACTCTCACTAGTGAATaGCACTGGGAAACTTCTATT +
Preference number: 2 (lower is better)
Translates to: SWLWKVLVCRSAQGSVRLTLTSE*HWETSI
Trigger: AATAGAAGTTTCCCAGTGGCATTCACTAGTGAGAGT...GAGCCTCACAGATCCCTGAGCAGACCTGCATACTAGCACTTTCCACAACCAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR-3UTR GCA 90 bp AAGGCTGCACATCCTGTACGGCGAAGGTCGGATGGAAGGAGTGGTTTAGTGTGGATGGTCAAATCAGGTTaGTTTGTCCAGGTTTTAGAA +
Preference number: 2 (lower is better)
Translates to: KAAHPVRRRSDGRSGLVWMVKSG*FVQVLE
Trigger: TTCTAAAACCTGGACAAAGCAACCTGATTTGACCAT...CCACACTAAACCACTCCTTCCATCCGACCTTCGCCGTACAGGATGTGCAGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000650388.1
3UTR-3UTR GCA 90 bp TGCACATCCTGTACGGCGAAGGTCGGATGGAAGGAGTGGTTTAGTGTGGTGCCATTTCTTTTTCATAGCTaGATAGCAGCCGATCTTTCT +
Preference number: 2 (lower is better)
Translates to: CTSCTAKVGWKEWFSVVPFLFHS*IAADLS
Trigger: AGAAAGATCGGCTGCTATGCAGCTATGAAAAAGAAA...TGGCACCACACTAAACCACTCCTTCCATCCGACCTTCGCCGTACAGGATGTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000650388.1
3UTR-3UTR CCA 90 bp CATCCTGTACGGCGAAGGTCGGATGGAAGGAGTGGTTTAGTGTGGTGCCAGGTTCAAACCTTAATTTGTTaGGCAGGGTTAGGCATAATA +
Preference number: 2 (lower is better)
Translates to: HPVRRRSDGRSGLVWCQVQTLIC*AGLGII
Trigger: TATTATGCCTAACCCTGCCCAACAAATTAAGGTTTG...AACCTGGCACCACACTAAACCACTCCTTCCATCCGACCTTCGCCGTACAGGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648349.2
3UTR-3UTR CCA 90 bp AAGGTTGCCGTGCCAACCTCCCCTAGGGCAGGAGAAACAACTGGCATATGTTCAAAATCATTTTCTGGCTaGATGCTCACACCTGTAATC +
Preference number: 2 (lower is better)
Translates to: KVAVPTSPRAGETTGICSKSFSG*MLTPVI
Trigger: GATTACAGGTGTGAGCATCCAGCCAGAAAATGATTT...TGAACATATGCCAGTTGTTTCTCCTGCCCTAGGGGAGGTTGGCACGGCAACCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR-3UTR CCA 90 bp CTATGTTATGGTGCTCTTGGGTCAGGATCTCGCACTCTGCTCTGCTTCCTCCTCTATCGTAACACTCCATaGAAATCAGCTCCTTTTCAC +
Preference number: 2 (lower is better)
Translates to: LCYGALGSGSRTLLCFLLYRNTP*KSAPFH
Trigger: GTGAAAAGGAGCTGATTTCCATGGAGTGTTACGATA...GAGGAGGAAGCAGAGCAGAGTGCGAGATCCTGACCCAAGAGCACCATAACATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648349.2
3UTR-3UTR TCA 90 bp CCCCATAGGCACAGCATCTTTCAGCAACTTTTGACGCATTGTACTGACTTCCAGAGGAATCAAGCACTTTaGAGTCCCCGATTTCACACT +
Preference number: 2 (lower is better)
Translates to: PHRHSIFQQLLTHCTDFQRNQAL*SPRFHT
Trigger: AGTGTGAAATCGGGGACTTCAAAGTGCTTGATTCCT...CTGGAAGTCAGTACAATGCGTCAAAAGTTGCTGAAAGATGCTGTGCCTATGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
3UTR-3UTR GCA 90 bp GGTGGCAATGCTGTCCATGTATTTGCATCTGGATCATACTTTTCTCCTGAGCTATTCAGCTGCCATCTCTaGTCTCCCTTTCGGAGCTAT +
Preference number: 2 (lower is better)
Translates to: GGNAVHVFASGSYFSPELFSCHL*SPFRSY
Trigger: ATAGCTCCGAAAGGGAGAGCAGAGATGGCAGCTGAA...TAGCTCAGGAGAAAAGTATGATCCAGATGCAAATACATGGACAGCATTGCCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648349.2
3UTR-3UTR GCA 90 bp ACTTCTTTACTTCTTAAGCTGATGATACCCTTTTGCCCGCCCCATGTACCAGATTCTGGAAGGGGATACTaGGGTGTTTCTAGCACTCCT +
Preference number: 2 (lower is better)
Translates to: TSLLLKLMIPFCPPHVPDSGRGY*GVSSTP
Trigger: AGGAGTGCTAGAAACACCGCAGTATCCCCTTCCAGA...ATCTGGTACATGGGGCGGGCAAAAGGGTATCATCAGCTTAAGAAGTAAAGAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR-3UTR GCA 90 bp ACTTCTTTACTTCTTAAGCTGATGATACCCTTTTGCCCGCCCCATGTACCAGATGAAAGATGCGCCGACTaGGAAGTGCCTGTTTTCTCA +
Preference number: 2 (lower is better)
Translates to: TSLLLKLMIPFCPPHVPDERCAD*EVPVFS
Trigger: TGAGAAAACAGGCACTTCGCAGTCGGCGCATCTTTC...ATCTGGTACATGGGGCGGGCAAAAGGGTATCATCAGCTTAAGAAGTAAAGAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR-3UTR GCA 90 bp TGCACATCCTGTACGGCGAAGGTCGGATGGAAGGAGTGGTTTAGTGTGGTGCCATATTTCTGTATCATGTaGTATCCATCGAATTACTGC +
Preference number: 2 (lower is better)
Translates to: CTSCTAKVGWKEWFSVVPYFCIM*YPSNYC
Trigger: GCAGTAATTCGATGGATAGCACATGATACAGAAATA...TGGCACCACACTAAACCACTCCTTCCATCCGACCTTCGCCGTACAGGATGTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648349.2
3UTR-3UTR CCA 90 bp CCCCATAGGCACAGCATCTTTCAGCAACTTTTGACGCATTGTACTGACTTCCAGAGAAGTGGGGTAAAGTaGGTTGAGGTGAGAATGAGA +
Preference number: 2 (lower is better)
Translates to: PHRHSIFQQLLTHCTDFQRSGVK*VEVRMR
Trigger: TCTCATTCTCACCTCAACCCACTTTACCCCACTTCT...CTGGAAGTCAGTACAATGCGTCAAAAGTTGCTGAAAGATGCTGTGCCTATGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
3UTR-3UTR CCA 90 bp CAAGTGCAGTGGAAAAGCAGTCTTGGCATGTTTGGATATGTTGATTTGCATATAACTGTGCGGCACATCTaGCCTGGTGCCTCTGGCATA +
Preference number: 2 (lower is better)
Translates to: QVQWKSSLGMFGYVDLHITVRHI*PGASGI
Trigger: TATGCCAGAGGCACCAGGCCAGATGTGCCGCACAGT...TATATGCAAATCAACATATCCAAACATGCCAAGACTGCTTTTCCACTGCACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
3UTR-3UTR CCA 90 bp TTTTTCAACAGTTACGTGTTCTCCCAAACAAGAGCTAAAGCTCAAGTTTGTAAGACCATCTCGCTACCCTaGGCGTCCTCACGACTTCGG +
Preference number: 2 (lower is better)
Translates to: FFNSYVFSQTRAKAQVCKTISLP*ASSRLR
Trigger: CCGAAGTCGTGAGGACGCCCAGGGTAGCGAGATGGT...CTTACAAACTTGAGCTTTAGCTCTTGTTTGGGAGAACACGTAACTGTTGAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648349.2
3UTR-3UTR GCA 90 bp AGCTGGTTGTGGAAAGTGCTAGTATGCAGGTCTGCTCAGGGATCTGTGAGGCTCAAGTTATACCAAATATaGCAGGCTTTTAGAAATGGG +
Preference number: 2 (lower is better)
Translates to: SWLWKVLVCRSAQGSVRLKLYQI*QAFRNG
Trigger: CCCATTTCTAAAAGCCTGGCATATTTGGTATAACTT...GAGCCTCACAGATCCCTGAGCAGACCTGCATACTAGCACTTTCCACAACCAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR-3UTR CCA 90 bp GGTGGCAATGCTGTCCATGTATTTGCATCTGGATCATACTTTTCTCCTGAGCTAATGTTATGGTGCTCTTaGGTCAGGATCTCGCACTCT +
Preference number: 2 (lower is better)
Translates to: GGNAVHVFASGSYFSPELMLWCS*VRISHS
Trigger: AGAGTGCGAGATCCTGACCCAAGAGCACCATAACAT...TAGCTCAGGAGAAAAGTATGATCCAGATGCAAATACATGGACAGCATTGCCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648349.2
3UTR-3UTR CCA 90 bp ACTTCTTTACTTCTTAAGCTGATGATACCCTTTTGCCCGCCCCATGTACCAGATATTAGCTGGGCATACTaGTGTGCACTTGTAGTCCCA +
Preference number: 2 (lower is better)
Translates to: TSLLLKLMIPFCPPHVPDISWAY*CALVVP
Trigger: TGGGACTACAAGTGCACACCAGTATGCCCAGCTAAT...ATCTGGTACATGGGGCGGGCAAAAGGGTATCATCAGCTTAAGAAGTAAAGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR-3UTR TCA 90 bp ACTTCTTTACTTCTTAAGCTGATGATACCCTTTTGCCCGCCCCATGTACCAGATATGCGTGACGTGTCTTaGTCTAAGTCAACACAGAAG +
Preference number: 2 (lower is better)
Translates to: TSLLLKLMIPFCPPHVPDMRDVS*SKSTQK
Trigger: CTTCTGTGTTGACTTAGATCAAGACACGTCACGCAT...ATCTGGTACATGGGGCGGGCAAAAGGGTATCATCAGCTTAAGAAGTAAAGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR-3UTR CCA 90 bp AACACTCTACAGACTCAAAAAGCTTTCCGTAGGAGCCTCCACCCATGGCGTAGATGCTTATTTTCATCTTaGCCCCCGAATACAAACAAA +
Preference number: 2 (lower is better)
Translates to: NTLQTQKAFRRSLHPWRRCLFSS*PPNTNK
Trigger: TTTGTTTGTATTCGGGGGCCAAGATGAAAATAAGCA...TCTACGCCATGGGTGGAGGCTCCTACGGAAAGCTTTTTGAGTCTGTAGAGTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000650388.1
3UTR CAA 90 bp GTCTCATGTCCTGAGCTAAGTCAACAGGGTGCTAACAGATTGTCATaGGAGGAGAAGCTTTGTCATTCTACTATTGAAAGCAAGCCCTTT +
Preference number: 2 (lower is better)
Translates to: VSCPELSQQGANRLS*EEKLCHSTIESKPF
Trigger: AAAGGGCTTGCTTTCAATAGTAGAATGACAAAGCTTCTCCTCCAATGACAATCTGTTAGCACCCTGTTGACTTAGCTCAGGACATGAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR-3UTR TCA 90 bp AGATCTCCACACTGTCACTACGAAAATGTGCAGACAACAGCTGACTGGTACACACAAAAATCCTTCTGCTaGGAGAACTCCATGGTTAAT +
Preference number: 2 (lower is better)
Translates to: RSPHCHYENVQTTADWYTQKSFC*ENSMVN
Trigger: ATTAACCATGGAGTTCTCTCAGCAGAAGGATTTTTG...TGTGTACCAGTCAGCTGTTGTCTGCACATTTTCGTAGTGACAGTGTGGAGATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648349.2
3UTR-3UTR GCA 90 bp CAAGTGCAGTGGAAAAGCAGTCTTGGCATGTTTGGATATGTTGATTTGCATATATTCAGCTGCCATCTCTaGTCTCCCTTTCGGAGCTAT +
Preference number: 2 (lower is better)
Translates to: QVQWKSSLGMFGYVDLHIFSCHL*SPFRSY
Trigger: ATAGCTCCGAAAGGGAGAGCAGAGATGGCAGCTGAA...TATATGCAAATCAACATATCCAAACATGCCAAGACTGCTTTTCCACTGCACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
3UTR-3UTR GCA 90 bp CCCCATAGGCACAGCATCTTTCAGCAACTTTTGACGCATTGTACTGACTTCCAGAGCTTTGTTGGTTATTaGATCCCATATTATGTGGCA +
Preference number: 2 (lower is better)
Translates to: PHRHSIFQQLLTHCTDFQSFVGY*IPYYVA
Trigger: TGCCACATAATATGGGATGCAATAACCAACAAAGCT...CTGGAAGTCAGTACAATGCGTCAAAAGTTGCTGAAAGATGCTGTGCCTATGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR-3UTR CCA 90 bp CCCCATAGGCACAGCATCTTTCAGCAACTTTTGACGCATTGTACTGACTTCCAGAGTACTAGGAATAAATaGAGACTAACTGGCATACAG +
Preference number: 2 (lower is better)
Translates to: PHRHSIFQQLLTHCTDFQSTRNK*RLTGIQ
Trigger: CTGTATGCCAGTTAGTCTCCATTTATTCCTAGTACT...CTGGAAGTCAGTACAATGCGTCAAAAGTTGCTGAAAGATGCTGTGCCTATGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
3UTR CAA 90 bp AAGTCAGTCTCATGTCCTGAGCTAAGTCAACAGGGTGCTAACAGATaGTCATTGGAGGAGAAGCTTTGTCATTCTACTATTGAAAGCAAG +
Preference number: 2 (lower is better)
Translates to: KSVSCPELSQQGANR*SLEEKLCHSTIESK
Trigger: CTTGCTTTCAATAGTAGAATGACAAAGCTTCTCCTCCAATGACAATCTGTTAGCACCCTGTTGACTTAGCTCAGGACATGAGACTGACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR-3UTR TCA 90 bp CACTGGGAAACTTCTATTACAAAGACTAGATTCTTAACACAGATTCGCATTCTAAAGCCCAGCACAGAGTaGGTTTCAGCTGCCATCTCT +
Preference number: 2 (lower is better)
Translates to: HWETSITKTRFLTQIRILKPSTE*VSAAIS
Trigger: AGAGATGGCAGCTGAAACTCACTCTGTGCTGGGCTT...TAGAATGCGAATCTGTGTTAAGAATCTAGTCTTTGTAATAGAAGTTTCCCAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
3UTR-3UTR TCA 90 bp TTCATAGGTGGCAATGCTGTCCATGTATTTGCATCTGGATCATACTTTTCTCCTTACAGCAGTCAGACATaGGTTCCCTTCAGGGAAAAT +
Preference number: 2 (lower is better)
Translates to: FIGGNAVHVFASGSYFSPYSSQT*VPFREN
Trigger: ATTTTCCCTGAAGGGAACTCATGTCTGACTGCTGTA...AGGAGAAAAGTATGATCCAGATGCAAATACATGGACAGCATTGCCACCTATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648349.2
3UTR-3UTR TCA 90 bp GCAGTCAGACATGAGTTCCCTTCAGGGAAAATGCACCTTAGTATTTTAACTTTGAGGAATCAAGCACTTTaGAGTCCCCGATTTCACACT +
Preference number: 2 (lower is better)
Translates to: AVRHEFPSGKMHLSILTLRNQAL*SPRFHT
Trigger: AGTGTGAAATCGGGGACTTCAAAGTGCTTGATTCCT...CAAAGTTAAAATACTAAGGTGCATTTTCCCTGAAGGGAACTCATGTCTGACTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
3UTR-3UTR TCA 90 bp CAGCTGCTGAATGCCAAGGTACTGTTCTGTACAGGACATTTCACCAAAGCAAATGTGGGAGAACGTAAGTaGTGTTTTTCATATGCATGT +
Preference number: 2 (lower is better)
Translates to: QLLNAKVLFCTGHFTKANVGERK*CFSYAC
Trigger: ACATGCATATGAAAAACATCACTTACGTTCTCCCAC...ATTTGCTTTGGTGAAATGTCCTGTACAGAACAGTACCTTGGCATTCAGCAGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
3UTR-3UTR CCA 90 bp CAAGTGCAGTGGAAAAGCAGTCTTGGCATGTTTGGATATGTTGATTTGCATATAACAGCCACATTTAACTaGAGGAACTCACTCCTCCCA +
Preference number: 2 (lower is better)
Translates to: QVQWKSSLGMFGYVDLHITATFN*RNSLLP
Trigger: TGGGAGGAGTGAGTTCCTCCAGTTAAATGTGGCTGT...TATATGCAAATCAACATATCCAAACATGCCAAGACTGCTTTTCCACTGCACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
3UTR-3UTR CCA 90 bp AGATCTCCACACTGTCACTACGAAAATGTGCAGACAACAGCTGACTGGTACACAGATTTCACACTAGGGTaGTGTAATTCAAGTGGAAAA +
Preference number: 2 (lower is better)
Translates to: RSPHCHYENVQTTADWYTDFTLG*CNSSGK
Trigger: TTTTCCACTTGAATTACACCACCCTAGTGTGAAATC...TGTGTACCAGTCAGCTGTTGTCTGCACATTTTCGTAGTGACAGTGTGGAGATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
3UTR-3UTR CCA 90 bp GAACCCCATAGGCACAGCATCTTTCAGCAACTTTTGACGCATTGTACTGACTTCGATCGTGGCTTTAACTaGATGTCAGTTACTGTTTTA +
Preference number: 2 (lower is better)
Translates to: EPHRHSIFQQLLTHCTDFDRGFN*MSVTVL
Trigger: TAAAACAGTAACTGACATCCAGTTAAAGCCACGATC...GAAGTCAGTACAATGCGTCAAAAGTTGCTGAAAGATGCTGTGCCTATGGGGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
3UTR-3UTR CCA 90 bp CCCCATAGGCACAGCATCTTTCAGCAACTTTTGACGCATTGTACTGACTTCCAGAGTAAAATAACAGTTTaGCACTTAGCAGCTTTGTTG +
Preference number: 2 (lower is better)
Translates to: PHRHSIFQQLLTHCTDFQSKITV*HLAALL
Trigger: CAACAAAGCTGCTAAGTGCCAAACTGTTATTTTACT...CTGGAAGTCAGTACAATGCGTCAAAAGTTGCTGAAAGATGCTGTGCCTATGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR-3UTR CCA 90 bp GCAGTCAGACATGAGTTCCCTTCAGGGAAAATGCACCTTAGTATTTTAACTTTGTGCCTCGTTCATAGGTaGCAATGCTGTCCATGTATT +
Preference number: 2 (lower is better)
Translates to: AVRHEFPSGKMHLSILTLCLVHR*QCCPCI
Trigger: AATACATGGACAGCATTGCCACCTATGAACGAGGCA...CAAAGTTAAAATACTAAGGTGCATTTTCCCTGAAGGGAACTCATGTCTGACTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648349.2
3UTR CAA 90 bp AACTGGCATACAGTCCAATCTAACATTTTAGGCACAAACCTTAATTaGTTGGGCAGGGTTAGGCATAATATATCCTTCCAAGTGCAGTGG +
Preference number: 2 (lower is better)
Translates to: NWHTVQSNILGTNLN*LGRVRHNISFQVQW
Trigger: CCACTGCACTTGGAAGGATATATTATGCCTAACCCTGCCCAACAAATTAAGGTTTGTGCCTAAAATGTTAGATTGGACTGTATGCCAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
3UTR CAA 90 bp CCTCTGACTGCCTGCTTCCAAGCTTTTGTTAAAGAACAGAATGTGTaGAATTCTTCTCAATTGGCAGGGGATCAAGCACAATACTACATA +
Preference number: 2 (lower is better)
Translates to: PLTACFQAFVKEQNV*NSSQLAGDQAQYYI
Trigger: TATGTAGTATTGTGCTTGATCCCCTGCCAATTGAGAAGAATTCAACACATTCTGTTCTTTAACAAAAGCTTGGAAGCAGGCAGTCAGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR-3UTR GCA 90 bp CATAATTTGTCTAAAACTCTCACTAGTGAATGCCACTGGGAAACTTCTATTACAGGAGCTATGTTATGGTaGTCTTGGGTCAGGATCTCG +
Preference number: 2 (lower is better)
Translates to: HNLSKTLTSECHWETSITGAMLW*SWVRIS
Trigger: CGAGATCCTGACCCAAGAGCACCATAACATAGCTCC...TGTAATAGAAGTTTCCCAGTGGCATTCACTAGTGAGAGTTTTAGACAAATTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
3UTR-3UTR CCA 90 bp CAGCTGCTGAATGCCAAGGTACTGTTCTGTACAGGACATTTCACCAAAGCAAATACTAGTGAATGCCACTaGGAAACTTCTATTACAAAG +
Preference number: 2 (lower is better)
Translates to: QLLNAKVLFCTGHFTKANTSECH*ETSITK
Trigger: CTTTGTAATAGAAGTTTCCCAGTGGCATTCACTAGT...ATTTGCTTTGGTGAAATGTCCTGTACAGAACAGTACCTTGGCATTCAGCAGCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
3UTR-3UTR CCA 90 bp CAGCTGCTGAATGCCAAGGTACTGTTCTGTACAGGACATTTCACCAAAGCAAATTTTTATGTCTATGGGTaGGAGAACGTAAGTGATGTT +
Preference number: 2 (lower is better)
Translates to: QLLNAKVLFCTGHFTKANFYVYG*ENVSDV
Trigger: AACATCACTTACGTTCTCCCACCCATAGACATAAAA...ATTTGCTTTGGTGAAATGTCCTGTACAGAACAGTACCTTGGCATTCAGCAGCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
3UTR-3UTR CCA 90 bp CAAGTGCAGTGGAAAAGCAGTCTTGGCATGTTTGGATATGTTGATTTGCATATAGCTGAGAGAACTCCATaGTTAATTCTCGGCATGCTT +
Preference number: 2 (lower is better)
Translates to: QVQWKSSLGMFGYVDLHIAERTP*LILGML
Trigger: AAGCATGCCGAGAATTAACCATGGAGTTCTCTCAGC...TATATGCAAATCAACATATCCAAACATGCCAAGACTGCTTTTCCACTGCACTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648349.2
3UTR-3UTR CCA 90 bp ATAGATCCACCTTTTAAACTCATCATGGTAGAACTCGGACTTGCAAGTTACCATTGCCTCGTTCATAGGTaGCAATGCTGTCCATGTATT +
Preference number: 2 (lower is better)
Translates to: IDPPFKLIMVELGLASYHCLVHR*QCCPCI
Trigger: AATACATGGACAGCATTGCCACCTATGAACGAGGCA...ATGGTAACTTGCAAGTCCGAGTTCTACCATGATGAGTTTAAAAGGTGGATCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000650388.1
3UTR CAA 90 bp TGGCATACAGTCCAATCTAACATTTTAGGCACAAACCTTAATTTGTaGGGCAGGGTTAGGCATAATATATCCTTCCAAGTGCAGTGGAAA +
Preference number: 2 (lower is better)
Translates to: WHTVQSNILGTNLNL*GRVRHNISFQVQWK
Trigger: TTTCCACTGCACTTGGAAGGATATATTATGCCTAACCCTGCCCAACAAATTAAGGTTTGTGCCTAAAATGTTAGATTGGACTGTATGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
3UTR-3UTR TCA 90 bp TTTGCTTTCATTAAAAAGATCTCCACACTGTCACTACGAAAATGTGCAGACAACTACAGCAGTCAGACATaGGTTCCCTTCAGGGAAAAT +
Preference number: 2 (lower is better)
Translates to: FAFIKKISTLSLRKCADNYSSQT*VPFREN
Trigger: ATTTTCCCTGAAGGGAACTCATGTCTGACTGCTGTA...GTTGTCTGCACATTTTCGTAGTGACAGTGTGGAGATCTTTTTAATGAAAGCAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
3UTR-3UTR TCA 90 bp TTTTTCAACAGTTACGTGTTCTCCCAAACAAGAGCTAAAGCTCAAGTTTGTAAGATGCGTGACGTGTCTTaGTCTAAGTCAACACAGAAG +
Preference number: 2 (lower is better)
Translates to: FFNSYVFSQTRAKAQVCKMRDVS*SKSTQK
Trigger: CTTCTGTGTTGACTTAGATCAAGACACGTCACGCAT...CTTACAAACTTGAGCTTTAGCTCTTGTTTGGGAGAACACGTAACTGTTGAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
3UTR-3UTR GCA 90 bp TTTAATCCTGCTGAAGAAGAGAAACGCGAACACCAAGTAAAACTTACTATAAACCTACCCCAGAAAGGATaGGTGACGTGTCTTGATCTA +
Preference number: 2 (lower is better)
Translates to: FNPAEEEKREHQVKLTINLPQKG*VTCLDL
Trigger: TAGATCAAGACACGTCACGCATCCTTTCTGGGGTAG...GTTTATAGTAAGTTTTACTTGGTGTTCGCGTTTCTCTTCTTCAGCAGGATTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR-3UTR GCA 90 bp ACTTCTTTACTTCTTAAGCTGATGATACCCTTTTGCCCGCCCCATGTACCAGATAAACAAGACTTTGTGTaGTTTCAGACAGGTTATATG +
Preference number: 2 (lower is better)
Translates to: TSLLLKLMIPFCPPHVPDKQDFV*FQTGYM
Trigger: CATATAACCTGTCTGAAAGCACACAAAGTCTTGTTT...ATCTGGTACATGGGGCGGGCAAAAGGGTATCATCAGCTTAAGAAGTAAAGAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR-3UTR CCA 90 bp CATAATTTGTCTAAAACTCTCACTAGTGAATGCCACTGGGAAACTTCTATTACAATGTTATGGTGCTCTTaGGTCAGGATCTCGCACTCT +
Preference number: 2 (lower is better)
Translates to: HNLSKTLTSECHWETSITMLWCS*VRISHS
Trigger: AGAGTGCGAGATCCTGACCCAAGAGCACCATAACAT...TGTAATAGAAGTTTCCCAGTGGCATTCACTAGTGAGAGTTTTAGACAAATTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
3UTR-3UTR CCA 90 bp CAGCTGCTGAATGCCAAGGTACTGTTCTGTACAGGACATTTCACCAAAGCAAATGTTTCAAGGCATAAGTaGAATGTTAAAACACAAACC +
Preference number: 2 (lower is better)
Translates to: QLLNAKVLFCTGHFTKANVSRHK*NVKTQT
Trigger: GGTTTGTGTTTTAACATTCCACTTATGCCTTGAAAC...ATTTGCTTTGGTGAAATGTCCTGTACAGAACAGTACCTTGGCATTCAGCAGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR CAA 90 bp AACTTTGATATTTTACATGATAGCAATTCCCACTCCCTTTTCCTTTaGATATTTACTAGCCTCCCTAGCCTCCAACATCTACAGCCACAT +
Preference number: 2 (lower is better)
Translates to: NFDILHDSNSHSLFL*IFTSLPSLQHLQPH
Trigger: ATGTGGCTGTAGATGTTGGAGGCTAGGGAGGCTAGTAAATATCAAAAGGAAAAGGGAGTGGGAATTGCTATCATGTAAAATATCAAAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
3UTR CAA 90 bp GTTGATTTGCATATACGGATTTTGTTTGTTACCAAAGCTACGTATTaGAATACAGCAGTCAGACATGAGTTCCCTTCAGGGAAAATGCAC +
Preference number: 2 (lower is better)
Translates to: VDLHIRILFVTKATY*NTAVRHEFPSGKMH
Trigger: GTGCATTTTCCCTGAAGGGAACTCATGTCTGACTGCTGTATTCAAATACGTAGCTTTGGTAACAAACAAAATCCGTATATGCAAATCAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
3UTR CAA 90 bp CCTTCCAAGTGCAGTGGAAAAGCAGTCTTGGCATGTTTGGATATGTaGATTTGCATATACGGATTTTGTTTGTTACCAAAGCTACGTATT +
Preference number: 2 (lower is better)
Translates to: PSKCSGKAVLACLDM*ICIYGFCLLPKLRI
Trigger: AATACGTAGCTTTGGTAACAAACAAAATCCGTATATGCAAATCAACATATCCAAACATGCCAAGACTGCTTTTCCACTGCACTTGGAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
3UTR-3UTR TCA 90 bp TTTTTCAACAGTTACGTGTTCTCCCAAACAAGAGCTAAAGCTCAAGTTTGTAAGATGAGGGCTGCAACCTaGCTCATCAATTTACTGAAT +
Preference number: 2 (lower is better)
Translates to: FFNSYVFSQTRAKAQVCKMRAAT*LINLLN
Trigger: ATTCAGTAAATTGATGAGTCAGGTTGCAGCCCTCAT...CTTACAAACTTGAGCTTTAGCTCTTGTTTGGGAGAACACGTAACTGTTGAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
3UTR-3UTR CCA 90 bp GCAGTCAGACATGAGTTCCCTTCAGGGAAAATGCACCTTAGTATTTTAACTTTGATCTTCTGGCTAAAATaGAGAGTTAATGTACCACAC +
Preference number: 2 (lower is better)
Translates to: AVRHEFPSGKMHLSILTLIFWLK*RVNVPH
Trigger: GTGTGGTACATTAACTCTCCATTTTAGCCAGAAGAT...CAAAGTTAAAATACTAAGGTGCATTTTCCCTGAAGGGAACTCATGTCTGACTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
3UTR-3UTR TCA 90 bp CATAATTTGTCTAAAACTCTCACTAGTGAATGCCACTGGGAAACTTCTATTACATTTGACGCATTGTACTaGCTTCCAGCAGGTATAAGA +
Preference number: 2 (lower is better)
Translates to: HNLSKTLTSECHWETSITFDALY*LPAGIR
Trigger: TCTTATACCTGCTGGAAGTCAGTACAATGCGTCAAA...TGTAATAGAAGTTTCCCAGTGGCATTCACTAGTGAGAGTTTTAGACAAATTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
3UTR-3UTR TCA 90 bp CATAATTTGTCTAAAACTCTCACTAGTGAATGCCACTGGGAAACTTCTATTACATGTGCAGACAACAGCTaGCTGGTACACAAAACAATT +
Preference number: 2 (lower is better)
Translates to: HNLSKTLTSECHWETSITCADNS*LVHKTI
Trigger: AATTGTTTTGTGTACCAGTCAGCTGTTGTCTGCACA...TGTAATAGAAGTTTCCCAGTGGCATTCACTAGTGAGAGTTTTAGACAAATTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
3UTR-3UTR CCA 90 bp AATACAAACAAAAATCCTTCTGCTGAGAGAACTCCATGGTTAATTCTCGGCATGAGTACTAGGAATAAATaGAGACTAACTGGCATACAG +
Preference number: 2 (lower is better)
Translates to: NTNKNPSAERTPWLILGMSTRNK*RLTGIQ
Trigger: CTGTATGCCAGTTAGTCTCCATTTATTCCTAGTACT...CATGCCGAGAATTAACCATGGAGTTCTCTCAGCAGAAGGATTTTTGTTTGTATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648349.2
3UTR CAA 90 bp AGCAGTCTTGGCATGTTTGGATATGTTGATTTGCATATACGGATTTaGTTTGTTACCAAAGCTACGTATTTGAATACAGCAGTCAGACAT +
Preference number: 2 (lower is better)
Translates to: SSLGMFGYVDLHIRI*FVTKATYLNTAVRH
Trigger: ATGTCTGACTGCTGTATTCAAATACGTAGCTTTGGTAACAAACAAAATCCGTATATGCAAATCAACATATCCAAACATGCCAAGACTGCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
3UTR CAA 90 bp CAAGTGCAGTGGAAAAGCAGTCTTGGCATGTTTGGATATGTTGATTaGCATATACGGATTTTGTTTGTTACCAAAGCTACGTATTTGAAT +
Preference number: 2 (lower is better)
Translates to: QVQWKSSLGMFGYVD*HIRILFVTKATYLN
Trigger: ATTCAAATACGTAGCTTTGGTAACAAACAAAATCCGTATATGCAAATCAACATATCCAAACATGCCAAGACTGCTTTTCCACTGCACTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
3UTR CAA 90 bp TTCTGGTTTTCTTTCAATGTGTGCACAGAAGGAAGCTCAACAACTTaGTTGAGCCAGGAAGAAATTATTATCAACATTTATAATCAGGCC +
Preference number: 2 (lower is better)
Translates to: FWFSFNVCTEGSSTT*LSQEEIIINIYNQA
Trigger: GGCCTGATTATAAATGTTGATAATAATTTCTTCCTGGCTCAACAAAGTTGTTGAGCTTCCTTCTGTGCACACATTGAAAGAAAACCAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR CAA 90 bp TATTCTGCAGGTCCCATGTCAGAAAACACAGATATGTTCAACAGATaGGTGTGGTATTTATATGGTATTCGTGGCATTTTCCTTATAGTA +
Preference number: 2 (lower is better)
Translates to: YSAGPMSENTDMFNR*VWYLYGIRGIFLIV
Trigger: TACTATAAGGAAAATGCCACGAATACCATATAAATACCACACCAATCTGTTGAACATATCTGTGTTTTCTGACATGGGACCTGCAGAATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR-3UTR CCA 90 bp CATAATTTGTCTAAAACTCTCACTAGTGAATGCCACTGGGAAACTTCTATTACACAAACCTTAATTTGTTaGGCAGGGTTAGGCATAATA +
Preference number: 2 (lower is better)
Translates to: HNLSKTLTSECHWETSITQTLIC*AGLGII
Trigger: TATTATGCCTAACCCTGCCCAACAAATTAAGGTTTG...TGTAATAGAAGTTTCCCAGTGGCATTCACTAGTGAGAGTTTTAGACAAATTATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
3UTR TCA 72 bp CGAGCACGTCCGGGAGCCTGGGGCTGCACTGGGTGCTaGGGTAGTGAGCGGGGCCTGTGCCTGCCTGCCCTC +
Preference number: 3 (lower is better)
Translates to: RARPGAWGCTGC*GSERGLCLPAL
Trigger: GAGGGCAGGCAGGCACAGGCCCCGCTCACTACCTCAGCACCCAGTGCAGCCCCAGGCTCCCGGACGTGCTCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR TCA 72 bp CAGTCACATACTCGAGGGTCCAGCACAACACTGGCATaGGCCAACAGGAGCCACGCCGGCCACCTGCTGGGC +
Preference number: 3 (lower is better)
Translates to: QSHTRGSSTTLA*ANRSHAGHLLG
Trigger: GCCCAGCAGGTGGCCGGCGTGGCTCCTGTTGGCTCATGCCAGTGTTGTGCTGGACCCTCGAGTATGTGACTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR GCA 72 bp AAACAAGGGCTGCGCTCCGCTCTGGCGAATGCGAGCTaGAAAGGGACAGAGGAGGACCCACACGGAGGGTCC +
Preference number: 3 (lower is better)
Translates to: KQGLRSALANAS*KGTEEDPHGGS
Trigger: GGACCCTCCGTGTGGGTCCTCCTCTGTCCCTTTGCAGCTCGCATTCGCCAGAGCGGAGCGCAGCCCTTGTTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR GCA 72 bp GGGGCTGGCCTGGAAGGTGTCATTCTAGCCTACAGGTaGCTAAGGCGCTGGGATGTGTCCTTGGCGGTGCCT +
Preference number: 3 (lower is better)
Translates to: GAGLEGVILAYR*LRRWDVSLAVP
Trigger: AGGCACCGCCAAGGACACATCCCAGCGCCTTAGGCACCTGTAGGCTAGAATGACACCTTCCAGGCCAGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR CCA 72 bp GGTGACAGTCACATACTCGAGGGTCCAGCACAACACTaGCATGAGCCAACAGGAGCCACGCCGGCCACCTGC +
Preference number: 3 (lower is better)
Translates to: GDSHILEGPAQH*HEPTGATPATC
Trigger: GCAGGTGGCCGGCGTGGCTCCTGTTGGCTCATGCCAGTGTTGTGCTGGACCCTCGAGTATGTGACTGTCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR CCA 72 bp CTGACAGACACTAGGGAGGATGGAGGCGACCACGTGTaGAGTGCAGAAGGCGCATACCGGAGGAAGGTGAGG +
Preference number: 3 (lower is better)
Translates to: LTDTREDGGDHV*SAEGAYRRKVR
Trigger: CCTCACCTTCCTCCGGTATGCGCCTTCTGCACTCCACACGTGGTCGCCTCCATCCTCCCTAGTGTCTGTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR TCA 72 bp GCCTACCTACTCTGTGCAAGCACTGAGACTGGCAGATaGCAAAGACGGGGCCCTTGCCCGTTCCATAGTGGG +
Preference number: 3 (lower is better)
Translates to: AYLLCASTETGR*QRRGPCPFHSG
Trigger: CCCACTATGGAACGGGCAAGGGCCCCGTCTTTGTCATCTGCCAGTCTCAGTGCTTGCACAGAGTAGGTAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR GCA 72 bp TCAGCTCCCAGGATGGCAAGCACAGTTCCTAGTGGGTaGTCATCAGACATGTGTTGGCTGACCCAAGGCGGG +
Preference number: 3 (lower is better)
Translates to: SAPRMASTVPSG*SSDMCWLTQGG
Trigger: CCCGCCTTGGGTCAGCCAACACATGTCTGATGAGCACCCACTAGGAACTGTGCTTGCCATCCTGGGAGCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR CCA 72 bp GAAGGTGTCATTCTAGCCTACAGGTGCCTAAGGCGCTaGGATGTGTCCTTGGCGGTGCCTCAGAAGGCACCT +
Preference number: 3 (lower is better)
Translates to: EGVILAYRCLRR*DVSLAVPQKAP
Trigger: AGGTGCCTTCTGAGGCACCGCCAAGGACACATCCCAGCGCCTTAGGCACCTGTAGGCTAGAATGACACCTTC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR CCA 72 bp AAGAGGAAAGAAGGAAACAAGGGCTGCGCTCCGCTCTaGCGAATGCGAGCTGCAAAGGGACAGAGGAGGACC +
Preference number: 3 (lower is better)
Translates to: KRKEGNKGCAPL*RMRAAKGQRRT
Trigger: GGTCCTCCTCTGTCCCTTTGCAGCTCGCATTCGCCAGAGCGGAGCGCAGCCCTTGTTTCCTTCTTTCCTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR CCA 72 bp GATACCGTTTCTGATGAGGACAGGACTCTGCGGAGGTaGGCAGAGCAGGGGGTGCTTTTGTCAGCTCTGCTG +
Preference number: 3 (lower is better)
Translates to: DTVSDEDRTLRR*AEQGVLLSALL
Trigger: CAGCAGAGCTGACAAAAGCACCCCCTGCTCTGCCCACCTCCGCAGAGTCCTGTCCTCATCAGAAACGGTATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR GCA 72 bp AGAGTAGTAAGTGTGGCAGAAGCCCCCAAGCCCAGATaGACCTGCCACCAAGGCCTATGCTCTCAACCACTG +
Preference number: 3 (lower is better)
Translates to: RVVSVAEAPKPR*TCHQGLCSQPL
Trigger: CAGTGGTTGAGAGCATAGGCCTTGGTGGCAGGTGCATCTGGGCTTGGGGGCTTCTGCCACACTTACTACTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR GCA 72 bp ACAGCCAGGGCCAGCTGGTTGTGGAAAGTGCTAGTATaGAGGTCTGCTCAGGGATCTGTGAGGCTCATGCTC +
Preference number: 3 (lower is better)
Translates to: TARASWLWKVLV*RSAQGSVRLML
Trigger: GAGCATGAGCCTCACAGATCCCTGAGCAGACCTGCATACTAGCACTTTCCACAACCAGCTGGCCCTGGCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR GCA 72 bp GCTGAAGCTGCAGGCGGAAAAGCTTGCAATTCGCAATaGGTAAGGCTGCACATCCTGTACGGCGAAGGTCGG +
Preference number: 3 (lower is better)
Translates to: AEAAGGKACNSQ*VRLHILYGEGR
Trigger: CCGACCTTCGCCGTACAGGATGTGCAGCCTTACGCATTGCGAATTGCAAGCTTTTCCGCCTGCAGCTTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000650388.1
3UTR-3UTR CAA 90 bp GACTTGCAAGTTACCATCTCGCTACCCTGGGCGTCCTCACGACTTCGGACTCCCTATGTTATGGTGCTCTaGGGTCAGGATCTCGCACTC +
Preference number: 3 (lower is better)
Translates to: DLQVTISLPWASSRLRTPYVMVL*GQDLAL
Trigger: GAGTGCGAGATCCTGACCCAAGAGCACCATAACATA...GGGAGTCCGAAGTCGTGAGGACGCCCAGGGTAGCGAGATGGTAACTTGCAAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648349.2
3UTR-3UTR CAA 90 bp AGCTGGTTGTGGAAAGTGCTAGTATGCAGGTCTGCTCAGGGATCTGTGAGGCTCCAACAATCAGGTCCCTaGGTGACGACGTGCCCCATC +
Preference number: 3 (lower is better)
Translates to: SWLWKVLVCRSAQGSVRLQQSGP*VTTCPI
Trigger: GATGGGGCACGTCGTCACCAAGGGACCTGATTGTTG...GAGCCTCACAGATCCCTGAGCAGACCTGCATACTAGCACTTTCCACAACCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR GCA 72 bp CAGGCCTCCAAGATTACCCTGGTACAATGGGGAGAGTaGCCTGCCTATTCCAGAGGTGTGAGGATCAAAGGG +
Preference number: 3 (lower is better)
Translates to: QASKITLVQWGE*PAYSRGVRIKG
Trigger: CCCTTTGATCCTCACACCTCTGGAATAGGCAGGGCACTCTCCCCATTGTACCAGGGTAATCTTGGAGGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR CCA 72 bp TTGGGGACAGATCTGACTCTCACAGCCAGGGCCAGCTaGTTGTGGAAAGTGCTAGTATGCAGGTCTGCTCAG +
Preference number: 3 (lower is better)
Translates to: LGTDLTLTARAS*LWKVLVCRSAQ
Trigger: CTGAGCAGACCTGCATACTAGCACTTTCCACAACCAGCTGGCCCTGGCTGTGAGAGTCAGATCTGTCCCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR TCA 72 bp CAGTTCCTAGTGGGTGCTCATCAGACATGTGTTGGCTaGCCCAAGGCGGGTTTTGCTACACTCAGCTGCTCT +
Preference number: 3 (lower is better)
Translates to: QFLVGAHQTCVG*PKAGFATLSCS
Trigger: AGAGCAGCTGAGTGTAGCAAAACCCGCCTTGGGTCAGCCAACACATGTCTGATGAGCACCCACTAGGAACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR TCA 72 bp GACTCCGAACATGGCCAAAATACCCTTCCTCCACCTTaGCGGCAATCCCTAAGCTGGCAGAGAAAGATGCGC +
Preference number: 3 (lower is better)
Translates to: DSEHGQNTLPPP*RQSLSWQRKMR
Trigger: GCGCATCTTTCTCTGCCAGCTTAGGGATTGCCGTCAAGGTGGAGGAAGGGTATTTTGGCCATGTTCGGAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR GCA 72 bp GCCATCTCTGCTCTCCCTTTCGGAGCTATGTTATGGTaGTCTTGGGTCAGGATCTCGCACTCTGCTCTGCTT +
Preference number: 3 (lower is better)
Translates to: AISALPFGAMLW*SWVRISHSALL
Trigger: AAGCAGAGCAGAGTGCGAGATCCTGACCCAAGAGCACCATAACATAGCTCCGAAAGGGAGAGCAGAGATGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
3UTR GCA 72 bp CCCTTCCCGGCTCCACAGGTACTACCCCAGAAAGGATaGGTGACGTGTCTTGATCTAAGTCAACACAGAAGC +
Preference number: 3 (lower is better)
Translates to: PFPAPQVLPQKG*VTCLDLSQHRS
Trigger: GCTTCTGTGTTGACTTAGATCAAGACACGTCACGCATCCTTTCTGGGGTAGTACCTGTGGAGCCGGGAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
3UTR GCA 72 bp CCTAAGCTGGCAGAGAAAGATGCGCCGACTGCGAAGTaGCTGTTTTCTCAGAGATTCCACCTAGCAGTGTCC +
Preference number: 3 (lower is better)
Translates to: PKLAEKDAPTAK*LFSQRFHLAVS
Trigger: GGACACTGCTAGGTGGAATCTCTGAGAAAACAGGCACTTCGCAGTCGGCGCATCTTTCTCTGCCAGCTTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR GCA 72 bp CGGCGAAGGTCGGATGGAAGGAGTGGTTTAGTGTGGTaGCAGGTTCCTGTGCTTCTTTTAAACTCACGCACG +
Preference number: 3 (lower is better)
Translates to: RRRSDGRSGLVW*QVPVLLLNSRT
Trigger: CGTGCGTGAGTTTAAAAGAAGCACAGGAACCTGGCACCACACTAAACCACTCCTTCCATCCGACCTTCGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000650388.1
3UTR CCA 72 bp AGCACAGTTCCTAGTGGGTGCTCATCAGACATGTGTTaGCTGACCCAAGGCGGGTTTTGCTACACTCAGCTG +
Preference number: 3 (lower is better)
Translates to: STVPSGCSSDMC*LTQGGFCYTQL
Trigger: CAGCTGAGTGTAGCAAAACCCGCCTTGGGTCAGCCAACACATGTCTGATGAGCACCCACTAGGAACTGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR CCA 72 bp TCAGGGATCTGTGAGGCTCATGCTCTGGCCATTATGTaGTCTGAAGAACCAGAAGGGCTATTCTCCTCGCCC +
Preference number: 3 (lower is better)
Translates to: SGICEAHALAIM*SEEPEGLFSSP
Trigger: GGGCGAGGAGAATAGCCCTTCTGGTTCTTCAGACCACATAATGGCCAGAGCATGAGCCTCACAGATCCCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR CCA 72 bp ACAGATCTGACTCTCACAGCCAGGGCCAGCTGGTTGTaGAAAGTGCTAGTATGCAGGTCTGCTCAGGGATCT +
Preference number: 3 (lower is better)
Translates to: TDLTLTARASWL*KVLVCRSAQGS
Trigger: AGATCCCTGAGCAGACCTGCATACTAGCACTTTCCACAACCAGCTGGCCCTGGCTGTGAGAGTCAGATCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR CCA 72 bp GGTCATAGAGAGGGCACATGCATCGCATCGCTGCTGTaGGTTTCCGTGAAACTCTCTCTTCTCCACCAACAG +
Preference number: 3 (lower is better)
Translates to: GHREGTCIASLL*VSVKLSLLHQQ
Trigger: CTGTTGGTGGAGAAGAGAGAGTTTCACGGAAACCCACAGCAGCGATGCGATGCATGTGCCCTCTCTATGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000650388.1
3UTR CCA 72 bp TCTGCTCTCCCTTTCGGAGCTATGTTATGGTGCTCTTaGGTCAGGATCTCGCACTCTGCTCTGCTTCCTCCT +
Preference number: 3 (lower is better)
Translates to: SALPFGAMLWCS*VRISHSALLPP
Trigger: AGGAGGAAGCAGAGCAGAGTGCGAGATCCTGACCCAAGAGCACCATAACATAGCTCCGAAAGGGAGAGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648349.2
3UTR-3UTR CAA 90 bp AAGATCTCCCGAGAGGAAGAGTCTTGCCTACAACTGGTGAGCCTCCTCATCTTCAGGCAGGATGATTGCTaGAACCCAGGAGGCGGAGAT +
Preference number: 3 (lower is better)
Translates to: KISREEESCLQLVSLLIFRQDDC*NPGGGD
Trigger: ATCTCCGCCTCCTGGGTTCAAGCAATCATCCTGCCT...GAAGATGAGGAGGCTCACCAGTTGTAGGCAAGACTCTTCCTCTCGGGAGATCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR TCA 72 bp AGGTCTTCATCTGACCACGGGAGGCCTCTTGAATCATaGACGCCAACATTCTGGAAGGGGATACTGCGGTGT +
Preference number: 3 (lower is better)
Translates to: RSSSDHGRPLES*TPTFWKGILRC
Trigger: ACACCGCAGTATCCCCTTCCAGAATGTTGGCGTTCATGATTCAAGAGGCCTCCCGTGGTCAGATGAAGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR TCA 72 bp ACAAGACAAAACCATGACAACAATCAGGTCCCTTGGTaGCGACGTGCCCCATCAGCAAGGCTACCCACCTAC +
Preference number: 3 (lower is better)
Translates to: TRQNHDNNQVPW*RRAPSARLPTY
Trigger: GTAGGTGGGTAGCCTTGCTGATGGGGCACGTCGTCACCAAGGGACCTGATTGTTGTCATGGTTTTGTCTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR GCA 72 bp AAAATGGTTTTGCTCATTGAGAAGGCAGAATGGCACTaGAGGAGACCCTTCCCGGCTCCACAGGTACTACCC +
Preference number: 3 (lower is better)
Translates to: KMVLLIEKAEWH*RRPFPAPQVLP
Trigger: GGGTAGTACCTGTGGAGCCGGGAAGGGTCTCCTGCAGTGCCATTCTGCCTTCTCAATGAGCAAAACCATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
3UTR GCA 72 bp CTCCAAGATTACCCTGGTACAATGGGGAGAGTGCCCTaGCTATTCCAGAGGTGTGAGGATCAAAGGGGTATG +
Preference number: 3 (lower is better)
Translates to: LQDYPGTMGRVP*LFQRCEDQRGM
Trigger: CATACCCCTTTGATCCTCACACCTCTGGAATAGGCAGGGCACTCTCCCCATTGTACCAGGGTAATCTTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR GCA 72 bp CAGACATCACTGTCACTGCTAACACACAATGAAGTCTaGCTACGCCTACCTGAGGAGCATCCGCGATACCGT +
Preference number: 3 (lower is better)
Translates to: QTSLSLLTHNEV*LRLPEEHPRYR
Trigger: ACGGTATCGCGGATGCTCCTCAGGTAGGCGTAGGCAGACTTCATTGTGTGTTAGCAGTGACAGTGATGTCTG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR GCA 72 bp TATGGTGCTCTTGGGTCAGGATCTCGCACTCTGCTCTaGTTCCTCCTCAAGGGGAATGAACACGAATACGGA +
Preference number: 3 (lower is better)
Translates to: YGALGSGSRTLL*FLLKGNEHEYG
Trigger: TCCGTATTCGTGTTCATTCCCCTTGAGGAGGAAGCAGAGCAGAGTGCGAGATCCTGACCCAAGAGCACCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648349.2
3UTR CCA 72 bp CATATCTATCAGGCCTCCAAGATTACCCTGGTACAATaGGGAGAGTGCCCTGCCTATTCCAGAGGTGTGAGG +
Preference number: 3 (lower is better)
Translates to: HIYQASKITLVQ*GECPAYSRGVR
Trigger: CCTCACACCTCTGGAATAGGCAGGGCACTCTCCCCATTGTACCAGGGTAATCTTGGAGGCCTGATAGATATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR CCA 72 bp TGGTCACTTCCAGGCTGCTGGTACACACCCCAACAGTaGCTGCAAAGATTGTTCAAAACTTCTGCTGAGGCC +
Preference number: 3 (lower is better)
Translates to: WSLPGCWYTPQQ*LQRLFKTSAEA
Trigger: GGCCTCAGCAGAAGTTTTGAACAATCTTTGCAGCCACTGTTGGGGTGTGTACCAGCAGCCTGGAAGTGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR CCA 72 bp TTGAAGTTGGCCAGCATCGCCTCCCCTTGCTGCGGCTaGCTGAGCGGTATATTGCTACACTCTTTGACAATT +
Preference number: 3 (lower is better)
Translates to: LKLASIASPCCG*LSGILLHSLTI
Trigger: AATTGTCAAAGAGTGTAGCAATATACCGCTCAGCCAGCCGCAGCAAGGGGAGGCGATGCTGGCCAACTTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000650388.1
3UTR CCA 72 bp TGCACATCCTGTACGGCGAAGGTCGGATGGAAGGAGTaGTTTAGTGTGGTGCCAGGTTCCTGTGCTTCTTTT +
Preference number: 3 (lower is better)
Translates to: CTSCTAKVGWKE*FSVVPGSCASF
Trigger: AAAAGAAGCACAGGAACCTGGCACCACACTAAACCACTCCTTCCATCCGACCTTCGCCGTACAGGATGTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000650388.1
3UTR-3UTR CAA 90 bp AAGGCTGCACATCCTGTACGGCGAAGGTCGGATGGAAGGAGTGGTTTAGTGTGGGGCACAAACCTTAATTaGTTGGGCAGGGTTAGGCAT +
Preference number: 3 (lower is better)
Translates to: KAAHPVRRRSDGRSGLVWGTNLN*LGRVRH
Trigger: ATGCCTAACCCTGCCCAACAAATTAAGGTTTGTGCC...CCACACTAAACCACTCCTTCCATCCGACCTTCGCCGTACAGGATGTGCAGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648349.2
3UTR-3UTR CAA 90 bp AAGATCTCCCGAGAGGAAGAGTCTTGCCTACAACTGGTGAGCCTCCTCATCTTCACCACGGGAGGCCTCTaGAATCATGAACGCCAACAT +
Preference number: 3 (lower is better)
Translates to: KISREEESCLQLVSLLIFTTGGL*NHERQH
Trigger: ATGTTGGCGTTCATGATTCAAGAGGCCTCCCGTGGT...GAAGATGAGGAGGCTCACCAGTTGTAGGCAAGACTCTTCCTCTCGGGAGATCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR-3UTR CAA 90 bp AAGGTTGCCGTGCCAACCTCCCCTAGGGCAGGAGAAACAACTGGCATATGTTCAAACACCCAACACATCTaGCCCAGCACTCTTCTTTGC +
Preference number: 3 (lower is better)
Translates to: KVAVPTSPRAGETTGICSNTQHI*PSTLLC
Trigger: GCAAAGAAGAGTGCTGGGCAAGATGTGTTGGGTGTT...TGAACATATGCCAGTTGTTTCTCCTGCCCTAGGGGAGGTTGGCACGGCAACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR-3UTR CAA 90 bp GACTTGCAAGTTACCATCTCGCTACCCTGGGCGTCCTCACGACTTCGGACTCCCCTGCTTATTTTCATCTaGGCCCCCGAATACAAACAA +
Preference number: 3 (lower is better)
Translates to: DLQVTISLPWASSRLRTPLLIFI*APEYKQ
Trigger: TTGTTTGTATTCGGGGGCCAAGATGAAAATAAGCAG...GGGAGTCCGAAGTCGTGAGGACGCCCAGGGTAGCGAGATGGTAACTTGCAAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000650388.1
3UTR GCA 72 bp AAAGCCCAGCACAGAGTGAGTTTCAGCTGCCATCTCTaGTCTCCCTTTCGGAGCTATGTTATGGTGCTCTTG +
Preference number: 3 (lower is better)
Translates to: KAQHRVSFSCHL*SPFRSYVMVLL
Trigger: CAAGAGCACCATAACATAGCTCCGAAAGGGAGAGCAGAGATGGCAGCTGAAACTCACTCTGTGCTGGGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
3UTR CCA 72 bp CACCTAGCAGTGTCCATGGGGAGCCACAGTGGAACATaGAGAGAACAATCAAGGCTGGTTCAAACGAAAGGT +
Preference number: 3 (lower is better)
Translates to: HLAVSMGSHSGT*REQSRLVQTKG
Trigger: ACCTTTCGTTTGAACCAGCCTTGATTGTTCTCTCCATGTTCCACTGTGGCTCCCCATGGACACTGCTAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR-3UTR CAA 90 bp AAGATCTCCCGAGAGGAAGAGTCTTGCCTACAACTGGTGAGCCTCCTCATCTTCACAGGCCTTAGAGAATaGTATTCCTCAAGGCCTCTG +
Preference number: 3 (lower is better)
Translates to: KISREEESCLQLVSLLIFTGLRE*YSSRPL
Trigger: CAGAGGCCTTGAGGAATACAATTCTCTAAGGCCTGT...GAAGATGAGGAGGCTCACCAGTTGTAGGCAAGACTCTTCCTCTCGGGAGATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR-3UTR CAA 90 bp ATGGTAGAACTCGGACTTGCAAGTTACCATCTCGCTACCCTGGGCGTCCTCACGTGGCTGAGCGGTATATaGCTACACTCTTTGACAATT +
Preference number: 3 (lower is better)
Translates to: MVELGLASYHLATLGVLTWLSGI*LHSLTI
Trigger: AATTGTCAAAGAGTGTAGCAATATACCGCTCAGCCA...CGTGAGGACGCCCAGGGTAGCGAGATGGTAACTTGCAAGTCCGAGTTCTACCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000650388.1
3UTR TCA 72 bp AAAACAAAGGGTATCACCATTACGTCGCCGGCGAACTaGAGGGGTACAAGACCGAGGAACCAAACACAAGCT +
Preference number: 3 (lower is better)
Translates to: KTKGITITSPAN*RGTRPRNQTQA
Trigger: AGCTTGTGTTTGGTTCCTCGGTCTTGTACCCCTTCAGTTCGCCGGCGACGTAATGGTGATACCCTTTGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR TCA 72 bp ACCTGCTGGGCCAGGGACCACTGCAAAGAGCAGCCCTaGATTTGGGAGGGTCAAATCGAATTTACAAATCTT +
Preference number: 3 (lower is better)
Translates to: TCWARDHCKEQP*IWEGQIEFTNL
Trigger: AAGATTTGTAAATTCGATTTGACCCTCCCAAATTCAGGGCTGCTCTTTGCAGTGGTCCCTGGCCCAGCAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR GCA 72 bp TACCATACCAAAGCCCAGCACAGAGTGAGTTTCAGCTaGCATCTCTGCTCTCCCTTTCGGAGCTATGTTATG +
Preference number: 3 (lower is better)
Translates to: YHTKAQHRVSFS*HLCSPFRSYVM
Trigger: CATAACATAGCTCCGAAAGGGAGAGCAGAGATGGCAGCTGAAACTCACTCTGTGCTGGGCTTTGGTATGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
3UTR GCA 72 bp CATCTTAAGGCCGTGTGTCCCCCGGACTCTGTGTGTTaGCATCCTTTTCCACCTGTTCCTTCTCTAATTCAT +
Preference number: 3 (lower is better)
Translates to: HLKAVCPPDSVC*HPFPPVPSLIH
Trigger: ATGAATTAGAGAAGGAACAGGTGGAAAAGGATGGCAACACACAGAGTCCGGGGGACACACGGCCTTAAGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR CCA 72 bp AATGAAGCCATATCTATCAGGCCTCCAAGATTACCCTaGTACAATGGGGAGAGTGCCCTGCCTATTCCAGAG +
Preference number: 3 (lower is better)
Translates to: NEAISIRPPRLP*YNGESALPIPE
Trigger: CTCTGGAATAGGCAGGGCACTCTCCCCATTGTACCAGGGTAATCTTGGAGGCCTGATAGATATGGCTTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR-3UTR CAA 90 bp TTGCAATTCGCAATGCGTAAGGCTGCACATCCTGTACGGCGAAGGTCGGATGGAAGTGGAAAAGCAGTCTaGGCATGTTTGGATATGTTG +
Preference number: 3 (lower is better)
Translates to: LQFAMRKAAHPVRRRSDGSGKAV*ACLDML
Trigger: CAACATATCCAAACATGCCAAGACTGCTTTTCCACT...TCCATCCGACCTTCGCCGTACAGGATGTGCAGCCTTACGCATTGCGAATTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648349.2
3UTR-3UTR CAA 90 bp AAGATCTCCCGAGAGGAAGAGTCTTGCCTACAACTGGTGAGCCTCCTCATCTTCTCCGGCATCTTTAAATaGATACAGTCAAAGCGCCAC +
Preference number: 3 (lower is better)
Translates to: KISREEESCLQLVSLLIFSGIFK*IQSKRH
Trigger: GTGGCGCTTTGACTGTATCAATTTAAAGATGCCGGA...GAAGATGAGGAGGCTCACCAGTTGTAGGCAAGACTCTTCCTCTCGGGAGATCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR-3UTR CAA 90 bp AGCTGGTTGTGGAAAGTGCTAGTATGCAGGTCTGCTCAGGGATCTGTGAGGCTCCGACTTCTCGGTCCTTaGTTAAATCCTACTTCTACT +
Preference number: 3 (lower is better)
Translates to: SWLWKVLVCRSAQGSVRLRLLGP*LNPTST
Trigger: AGTAGAAGTAGGATTTAACAAAGGACCGAGAAGTCG...GAGCCTCACAGATCCCTGAGCAGACCTGCATACTAGCACTTTCCACAACCAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR TCA 72 bp TTTGAGGACTCAGCTCTAAGAATTCTTCCGTGCTGCTaGCGTCTCGGAAATGAGTCTCCAGGTATTCTGTGG +
Preference number: 3 (lower is better)
Translates to: FEDSALRILPCC*RLGNESPGILW
Trigger: CCACAGAATACCTGGAGACTCATTTCCGAGACGTCAGCAGCACGGAAGAATTCTTAGAGCTGAGTCCTCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648349.2
3UTR CCA 72 bp TTACTTGTATATCATGTGGCAGCAGACGTGAGAATGTaGAAAGCTATAAGGCCTGGGACACTCAGTGCAGGC +
Preference number: 3 (lower is better)
Translates to: LLVYHVAADVRM*KAIRPGTLSAG
Trigger: GCCTGCACTGAGTGTCCCAGGCCTTATAGCTTTCCACATTCTCACGTCTGCTGCCACATGATATACAAGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR-3UTR CAA 90 bp CTATGTTATGGTGCTCTTGGGTCAGGATCTCGCACTCTGCTCTGCTTCCTCCTCACCAAAGCTACGTATTaGAATACAGCAGTCAGACAT +
Preference number: 3 (lower is better)
Translates to: LCYGALGSGSRTLLCFLLTKATY*NTAVRH
Trigger: ATGTCTGACTGCTGTATTCAAATACGTAGCTTTGGT...GAGGAGGAAGCAGAGCAGAGTGCGAGATCCTGACCCAAGAGCACCATAACATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648349.2
3UTR-3UTR CAA 90 bp AGCTGGTTGTGGAAAGTGCTAGTATGCAGGTCTGCTCAGGGATCTGTGAGGCTCACCAAAGCTACGTATTaGAATACAGCAGTCAGACAT +
Preference number: 3 (lower is better)
Translates to: SWLWKVLVCRSAQGSVRLTKATY*NTAVRH
Trigger: ATGTCTGACTGCTGTATTCAAATACGTAGCTTTGGT...GAGCCTCACAGATCCCTGAGCAGACCTGCATACTAGCACTTTCCACAACCAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR-3UTR CAA 90 bp AGGCGGAAAAGCTTGCAATTCGCAATGCGTAAGGCTGCACATCCTGTACGGCGAGCAGTCTTGGCATGTTaGGATATGTTGATTTGCATA +
Preference number: 3 (lower is better)
Translates to: RRKSLQFAMRKAAHPVRRAVLAC*DMLICI
Trigger: TATGCAAATCAACATATCCAAACATGCCAAGACTGC...TCGCCGTACAGGATGTGCAGCCTTACGCATTGCGAATTGCAAGCTTTTCCGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648349.2
3UTR-3UTR CAA 90 bp ACAGTTCCTAGTGGGTGCTCATCAGACATGTGTTGGCTGACCCAAGGCGGGTTTGCAGACCTTTATTATTaGTCTGACTCAGGTCTTTCT +
Preference number: 3 (lower is better)
Translates to: TVPSGCSSDMCWLTQGGFADLYY*SDSGLS
Trigger: AGAAAGACCTGAGTCAGACAAATAATAAAGGTCTGC...AAACCCGCCTTGGGTCAGCCAACACATGTCTGATGAGCACCCACTAGGAACTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR TCA 72 bp GTCAAACAGGATGCTGCTAGAGTAGCTCACCTTAAGTaGTCTTGCCAAAGATCCGTTCTTGCCAACACTGTC +
Preference number: 3 (lower is better)
Translates to: VKQDAARVAHLK*SCQRSVLANTV
Trigger: GACAGTGTTGGCAAGAACGGATCTTTGGCAAGATCACTTAAGGTGAGCTACTCTAGCAGCATCCTGTTTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR GCA 72 bp GAGAAGACACAGCCGGCTAGCTCTGAAGACATGGTGTaGATCCCAGCCTATAAATCTCTAATGATCTTGATC +
Preference number: 3 (lower is better)
Translates to: EKTQPASSEDMV*IPAYKSLMILI
Trigger: GATCAAGATCATTAGAGATTTATAGGCTGGGATGCACACCATGTCTTCAGAGCTAGCCGGCTGTGTCTTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR GCA 72 bp GCCTCCACCCATGGCGTAGATTTTCTTTTTCATAGCTaGATAGCAGCCGATCTTTCTGACCATGGTCAAATC +
Preference number: 3 (lower is better)
Translates to: ASTHGVDFLFHS*IAADLSDHGQI
Trigger: GATTTGACCATGGTCAGAAAGATCGGCTGCTATGCAGCTATGAAAAAGAAAATCTACGCCATGGGTGGAGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000650388.1
3UTR CCA 72 bp GGTGAGCTGATAATCCAAAGACCTGGCTTCTGCTTTTaGTTCTTGCTCCTCCCTAAAGTGAGAAATGAAGCC +
Preference number: 3 (lower is better)
Translates to: GELIIQRPGFCF*FLLLPKVRNEA
Trigger: GGCTTCATTTCTCACTTTAGGGAGGAGCAAGAACCAAAAGCAGAAGCCAGGTCTTTGGATTATCAGCTCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR CCA 72 bp ACTTGTATGCCTAGAAAAATCAAGTTCCAGCCTCACTaGCTGACTGGTGAGCTGATAATCCAAAGACCTGGC +
Preference number: 3 (lower is better)
Translates to: TCMPRKIKFQPH*LTGELIIQRPG
Trigger: GCCAGGTCTTTGGATTATCAGCTCACCAGTCAGCCAGTGAGGCTGGAACTTGATTTTTCTAGGCATACAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR-3UTR CAA 90 bp AACACTCTACAGACTCAAAAAGCTTTCCGTAGGAGCCTCCACCCATGGCGTAGAACAAACCTTAATTTGTaGGGCAGGGTTAGGCATAAT +
Preference number: 3 (lower is better)
Translates to: NTLQTQKAFRRSLHPWRRTNLNL*GRVRHN
Trigger: ATTATGCCTAACCCTGCCCAACAAATTAAGGTTTGT...TCTACGCCATGGGTGGAGGCTCCTACGGAAAGCTTTTTGAGTCTGTAGAGTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648349.2
3UTR TCA 72 bp CCTTGGAAGGTTTTTGGAATCCCTGGTTTGGTACACTaGGGTAGGAATGTACCAAAGGGAACTCTAATGGAC +
Preference number: 3 (lower is better)
Translates to: PWKVFGIPGLVH*GRNVPKGTLMD
Trigger: GTCCATTAGAGTTCCCTTTGGTACATTCCTACCTCAGTGTACCAAACCAGGGATTCCAAAAACCTTCCAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR TCA 72 bp CTCCTCCATTTAAGTAGAATGTGTACAACTGTGCCCTaGAACTGGGCCATTATTACAAGATCTCCCGAGAGG +
Preference number: 3 (lower is better)
Translates to: LLHLSRMCTTVP*NWAIITRSPER
Trigger: CCTCTCGGGAGATCTTGTAATAATGGCCCAGTTTCAGGGCACAGTTGTACACATTCTACTTAAATGGAGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR TCA 72 bp AAATCAAGACTGTTAAAAACCAGTCTTGGACAAGGGTaGCAGTCACATACTCGAGGGTCCAGCACAACACTG +
Preference number: 3 (lower is better)
Translates to: KSRLLKTSLGQG*QSHTRGSSTTL
Trigger: CAGTGTTGTGCTGGACCCTCGAGTATGTGACTGTCACCCTTGTCCAAGACTGGTTTTTAACAGTCTTGATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR GCA 72 bp TTGAATCATGAACGCCAACATTCTGGAAGGGGATACTaGGGTGTTTCTAGCACTCCTTGGAAGGTTTTTGGA +
Preference number: 3 (lower is better)
Translates to: LNHERQHSGRGY*GVSSTPWKVFG
Trigger: TCCAAAAACCTTCCAAGGAGTGCTAGAAACACCGCAGTATCCCCTTCCAGAATGTTGGCGTTCATGATTCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR GCA 72 bp CTGACTGGTGAGCTGATAATCCAAAGACCTGGCTTCTaGTTTTGGTTCTTGCTCCTCCCTAAAGTGAGAAAT +
Preference number: 3 (lower is better)
Translates to: LTGELIIQRPGF*FWFLLLPKVRN
Trigger: ATTTCTCACTTTAGGGAGGAGCAAGAACCAAAAGCAGAAGCCAGGTCTTTGGATTATCAGCTCACCAGTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR-3UTR CAA 90 bp CAGCTGCTGAATGCCAAGGTACTGTTCTGTACAGGACATTTCACCAAAGCAAATAAGGAATCAAGCACTTaGAAGTCCCCGATTTCACAC +
Preference number: 3 (lower is better)
Translates to: QLLNAKVLFCTGHFTKANKESST*KSPISH
Trigger: GTGTGAAATCGGGGACTTCAAAGTGCTTGATTCCTT...ATTTGCTTTGGTGAAATGTCCTGTACAGAACAGTACCTTGGCATTCAGCAGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
3UTR-3UTR CAA 90 bp CAGCTGCTGAATGCCAAGGTACTGTTCTGTACAGGACATTTCACCAAAGCAAATTGGCACTTAGCAGCTTaGTTGGTTATTGCATCCCAT +
Preference number: 3 (lower is better)
Translates to: QLLNAKVLFCTGHFTKANWHLAA*LVIASH
Trigger: ATGGGATGCAATAACCAACAAAGCTGCTAAGTGCCA...ATTTGCTTTGGTGAAATGTCCTGTACAGAACAGTACCTTGGCATTCAGCAGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR-3UTR CAA 90 bp ACTGGCTCCTATAGGTACAGCTCCATAAACAAAAGAGGAACTGGCGGGGATGCAATGCTGTCCATGTATTaGCATCTGGATCATACTTTT +
Preference number: 3 (lower is better)
Translates to: TGSYRYSSINKRGTGGDAMLSMY*HLDHTF
Trigger: AAAAGTATGATCCAGATGCAAATACATGGACAGCAT...TGCATCCCCGCCAGTTCCTCTTTTGTTTATGGAGCTGTACCTATAGGAGCCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000650388.1
3UTR TCA 72 bp CTCATGGAAATCACTTCCAGGAAATGTCTCATGTCCTaGGCTAAGTCAGTCTCATGTCCTGAGCTAAGTCAA +
Preference number: 3 (lower is better)
Translates to: LMEITSRKCLMS*AKSVSCPELSQ
Trigger: TTGACTTAGCTCAGGACATGAGACTGACTTAGCTCAGGACATGAGACATTTCCTGGAAGTGATTTCCATGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR TCA 72 bp ACCAGAAGACAGATGAACCTCCGTTTGGGATGTGAATaGTTTGAAATGGCCGTTCATTTACGTGGATCCTAT +
Preference number: 3 (lower is better)
Translates to: TRRQMNLRLGCE*FEMAVHLRGSY
Trigger: ATAGGATCCACGTAAATGAACGGCCATTTCAAATCATTCACATCCCAAACGGAGGTTCATCTGTCTTCTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR GCA 72 bp ATGCAAAGGTACAAAAGTTCCACACACACAGACACATaGACAAACACACATGCACGTACACACAAGTACTTG +
Preference number: 3 (lower is better)
Translates to: MQRYKSSTHTDT*TNTHARTHKYL
Trigger: CAAGTACTTGTGTGTACGTGCATGTGTGTTTGTGCATGTGTCTGTGTGTGTGGAACTTTTGTACCTTTGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR GCA 72 bp TCCGAAGTTATGTCTTGCCTCGTTCATAGGTGGCAATaGTGTCCATGTATTTGCATCTGGATCATACTTTTC +
Preference number: 3 (lower is better)
Translates to: SEVMSCLVHRWQ*CPCICIWIILF
Trigger: GAAAAGTATGATCCAGATGCAAATACATGGACAGCATTGCCACCTATGAACGAGGCAAGACATAACTTCGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000650388.1
3UTR CCA 72 bp GGCAGGGTTAGGCATAATATATCCTTCCAAGTGCAGTaGAAAAGCAGTCTTGGCATGTTTGGATATGTTGAT +
Preference number: 3 (lower is better)
Translates to: GRVRHNISFQVQ*KSSLGMFGYVD
Trigger: ATCAACATATCCAAACATGCCAAGACTGCTTTTCCACTGCACTTGGAAGGATATATTATGCCTAACCCTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
3UTR CCA 72 bp AATACAAACAAAAATCCTTCTGCTGAGAGAACTCCATaGTTAATTCTCGGCATGCTTAAAGGGGCCAGTTCG +
Preference number: 3 (lower is better)
Translates to: NTNKNPSAERTP*LILGMLKGASS
Trigger: CGAACTGGCCCCTTTAAGCATGCCGAGAATTAACCATGGAGTTCTCTCAGCAGAAGGATTTTTGTTTGTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000650388.1
3UTR TCA 72 bp ATCCTCAAGCACCCAAATCCCAAATACTGGGTCAGATaGCAGATAGACACATTTTCTTGTCTGATGCTAACA +
Preference number: 3 (lower is better)
Translates to: ILKHPNPKYWVR*QIDTFSCLMLT
Trigger: TGTTAGCATCAGACAAGAAAATGTGTCTATCTGTCATCTGACCCAGTATTTGGGATTTGGGTGCTTGAGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR TCA 72 bp CAACTCTATATAGTTCTGCCAACCTCAACTCTGCACTaGGGAAACACTTTAAGTGAGGAGGATCTTAGCAAT +
Preference number: 3 (lower is better)
Translates to: QLYIVLPTSTLH*GNTLSEEDLSN
Trigger: ATTGCTAAGATCCTCCTCACTTAAAGTGTTTCCTCAGTGCAGAGTTGAGGTTGGCAGAACTATATAGAGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR GCA 72 bp CAGAAGCGAGCAACTTCTTTCAGTTCACATGAGGGCTaGAACCTGACTCATCAATTTACTGAATCTTTACAT +
Preference number: 3 (lower is better)
Translates to: QKRATSFSSHEG*NLTHQFTESLH
Trigger: ATGTAAAGATTCAGTAAATTGATGAGTCAGGTTGCAGCCCTCATGTGAACTGAAAGAAGTTGCTCGCTTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
3UTR GCA 72 bp TCACGACTGTACAATTTCTGGTTTTCTTTCAATGTGTaGACAGAAGGAAGCTCAACAACTTTGTTGAGCCAG +
Preference number: 3 (lower is better)
Translates to: SRLYNFWFSFNV*TEGSSTTLLSQ
Trigger: CTGGCTCAACAAAGTTGTTGAGCTTCCTTCTGTGCACACATTGAAAGAAAACCAGAAATTGTACAGTCGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR-3UTR CAA 90 bp CATAATTTGTCTAAAACTCTCACTAGTGAATGCCACTGGGAAACTTCTATTACATATGTTATGGTGCTCTaGGGTCAGGATCTCGCACTC +
Preference number: 3 (lower is better)
Translates to: HNLSKTLTSECHWETSITYVMVL*GQDLAL
Trigger: GAGTGCGAGATCCTGACCCAAGAGCACCATAACATA...TGTAATAGAAGTTTCCCAGTGGCATTCACTAGTGAGAGTTTTAGACAAATTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
3UTR-3UTR CAA 90 bp ACTTCTTTACTTCTTAAGCTGATGATACCCTTTTGCCCGCCCCATGTACCAGATTTGCATATACGGATTTaGTTTGTTACCAAAGCTACG +
Preference number: 3 (lower is better)
Translates to: TSLLLKLMIPFCPPHVPDLHIRI*FVTKAT
Trigger: CGTAGCTTTGGTAACAAACAAAATCCGTATATGCAA...ATCTGGTACATGGGGCGGGCAAAAGGGTATCATCAGCTTAAGAAGTAAAGAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR-3UTR CAA 90 bp TTTGCTTTCATTAAAAAGATCTCCACACTGTCACTACGAAAATGTGCAGACAACGGCACAAACCTTAATTaGTTGGGCAGGGTTAGGCAT +
Preference number: 3 (lower is better)
Translates to: FAFIKKISTLSLRKCADNGTNLN*LGRVRH
Trigger: ATGCCTAACCCTGCCCAACAAATTAAGGTTTGTGCC...GTTGTCTGCACATTTTCGTAGTGACAGTGTGGAGATCTTTTTAATGAAAGCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
3UTR-3UTR CAA 90 bp CAGCTGCTGAATGCCAAGGTACTGTTCTGTACAGGACATTTCACCAAAGCAAATCCCAAATGCTCCTTTTaGGTTGTTATACAGTTTGAA +
Preference number: 3 (lower is better)
Translates to: QLLNAKVLFCTGHFTKANPKCSF*VVIQFE
Trigger: TTCAAACTGTATAACAACCAAAAAGGAGCATTTGGG...ATTTGCTTTGGTGAAATGTCCTGTACAGAACAGTACCTTGGCATTCAGCAGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR-3UTR CAA 90 bp ACTTCTTTACTTCTTAAGCTGATGATACCCTTTTGCCCGCCCCATGTACCAGATCTCTCTTTACCACGTTaGTACAAAGAATGTATTTCC +
Preference number: 3 (lower is better)
Translates to: TSLLLKLMIPFCPPHVPDLSLPR*YKECIS
Trigger: GGAAATACATTCTTTGTACAAACGTGGTAAAGAGAG...ATCTGGTACATGGGGCGGGCAAAAGGGTATCATCAGCTTAAGAAGTAAAGAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR-3UTR CAA 90 bp ACAGTCCAATCTAACATTTTAGGCACAAACCTTAATTTGTTGGGCAGGGTTAGGGCAGTCTTGGCATGTTaGGATATGTTGATTTGCATA +
Preference number: 3 (lower is better)
Translates to: TVQSNILGTNLNLLGRVRAVLAC*DMLICI
Trigger: TATGCAAATCAACATATCCAAACATGCCAAGACTGC...CCTAACCCTGCCCAACAAATTAAGGTTTGTGCCTAAAATGTTAGATTGGACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
3UTR-3UTR CAA 90 bp CAAGTGCAGTGGAAAAGCAGTCTTGGCATGTTTGGATATGTTGATTTGCATATAAGTGGAAAAGCAGTCTaGGCATGTTTGGATATGTTG +
Preference number: 3 (lower is better)
Translates to: QVQWKSSLGMFGYVDLHISGKAV*ACLDML
Trigger: CAACATATCCAAACATGCCAAGACTGCTTTTCCACT...TATATGCAAATCAACATATCCAAACATGCCAAGACTGCTTTTCCACTGCACTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
3UTR TCA 72 bp TCAGTTACTGTTTTAATGTTCCCCAATTACAGCTGCTaGATGCCAAGGTACTGTTCTGTACAGGACATTTCA +
Preference number: 3 (lower is better)
Translates to: SVTVLMFPNYSC*MPRYCSVQDIS
Trigger: TGAAATGTCCTGTACAGAACAGTACCTTGGCATTCAGCAGCTGTAATTGGGGAACATTAAAACAGTAACTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
3UTR TCA 72 bp TGCAAAGATTGTTCAAAACTTCTGCTGAGGCCACAATaGTTACGGGATGGTTGTCACAATTCACAAAAGGTA +
Preference number: 3 (lower is better)
Translates to: CKDCSKLLLRPQ*LRDGCHNSQKV
Trigger: TACCTTTTGTGAATTGTGACAACCATCCCGTAATCATTGTGGCCTCAGCAGAAGTTTTGAACAATCTTTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR TCA 72 bp ATATACGGATTTTGTTTGTTACCAAAGCTACGTATTTaGATACAGCAGTCAGACATGAGTTCCCTTCAGGGA +
Preference number: 3 (lower is better)
Translates to: IYGFCLLPKLRI*IQQSDMSSLQG
Trigger: TCCCTGAAGGGAACTCATGTCTGACTGCTGTATTCAAATACGTAGCTTTGGTAACAAACAAAATCCGTATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
3UTR TCA 72 bp ATTGTCATTGGAGGAGAAGCTTTGTCATTCTACTATTaGAAGCAAGCCCTTTACTCTGAAAAGCACAAGCAT +
Preference number: 3 (lower is better)
Translates to: IVIGGEALSFYY*KQALYSEKHKH
Trigger: ATGCTTGTGCTTTTCAGAGTAAAGGGCTTGCTTTCAATAGTAGAATGACAAAGCTTCTCCTCCAATGACAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR CCA 72 bp TTACACCTTCTCTTATCAGGTATCTTCTGGCTAAAATaGAGAGTTAATGTACCACACTCAACACTCTCTAGA +
Preference number: 3 (lower is better)
Translates to: LHLLLSGIFWLK*RVNVPHSTLSR
Trigger: TCTAGAGAGTGTTGAGTGTGGTACATTAACTCTCCATTTTAGCCAGAAGATACCTGATAAGAGAAGGTGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
3UTR CCA 72 bp CAATCAGAAGACTGTACATCATGTACATCAGGCACTTaGCATTGTTTATGCTATACTAGTTTCAGCTCCATA +
Preference number: 3 (lower is better)
Translates to: QSEDCTSCTSGT*HCLCYTSFSSI
Trigger: TATGGAGCTGAAACTAGTATAGCATAAACAATGCCAAGTGCCTGATGTACATGATGTACAGTCTTCTGATTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR TCA 72 bp GACTTTATCAAATGTCTTATTGAAATCAAGACAAGCTaGGCACATTATATACTCCTACCTCTGCCAGTCTCA +
Preference number: 3 (lower is better)
Translates to: DFIKCLIEIKTS*AHYILLPLPVS
Trigger: TGAGACTGGCAGAGGTAGGAGTATATAATGTGCTCAGCTTGTCTTGATTTCAATAAGACATTTGATAAAGTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR GCA 72 bp GGAAAAGCAGTCTTGGCATGTTTGGATATGTTGATTTaGATATACGGATTTTGTTTGTTACCAAAGCTACGT +
Preference number: 3 (lower is better)
Translates to: GKAVLACLDMLI*IYGFCLLPKLR
Trigger: ACGTAGCTTTGGTAACAAACAAAATCCGTATATGCAAATCAACATATCCAAACATGCCAAGACTGCTTTTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
3UTR-3UTR CAA 90 bp TTTAATCCTGCTGAAGAAGAGAAACGCGAACACCAAGTAAAACTTACTATAAACACAAACCTTAATTTGTaGGGCAGGGTTAGGCATAAT +
Preference number: 3 (lower is better)
Translates to: FNPAEEEKREHQVKLTINTNLNL*GRVRHN
Trigger: ATTATGCCTAACCCTGCCCAACAAATTAAGGTTTGT...GTTTATAGTAAGTTTTACTTGGTGTTCGCGTTTCTCTTCTTCAGCAGGATTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR-3UTR CAA 90 bp CATAATTTGTCTAAAACTCTCACTAGTGAATGCCACTGGGAAACTTCTATTACAATCTTTCAGCAACTTTaGACGCATTGTACTGACTTC +
Preference number: 3 (lower is better)
Translates to: HNLSKTLTSECHWETSITIFQQL*THCTDF
Trigger: GAAGTCAGTACAATGCGTCAAAAGTTGCTGAAAGAT...TGTAATAGAAGTTTCCCAGTGGCATTCACTAGTGAGAGTTTTAGACAAATTATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
3UTR-3UTR CAA 90 bp CATAATTTGTCTAAAACTCTCACTAGTGAATGCCACTGGGAAACTTCTATTACACAGAGGCCACATAGTTaGCTTTCATTAAAAAGATCT +
Preference number: 3 (lower is better)
Translates to: HNLSKTLTSECHWETSITQRPHS*LSLKRS
Trigger: AGATCTTTTTAATGAAAGCAAACTATGTGGCCTCTG...TGTAATAGAAGTTTCCCAGTGGCATTCACTAGTGAGAGTTTTAGACAAATTATG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
3UTR TCA 72 bp TTGAATTTAAATACTAGAGATGTAGATGGAGAGAGGTaGTATGGGTCTAGAAAGCAAATCATTTTCTGGCTG +
Preference number: 3 (lower is better)
Translates to: LNLNTRDVDGER*YGSRKQIIFWL
Trigger: CAGCCAGAAAATGATTTGCTTTCTAGACCCATATCACCTCTCTCCATCTACATCTCTAGTATTTAAATTCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR GCA 72 bp ATCCTTCATGTGGACCTTTCTTATTTCTGTATCATGTaGTATCCATCGAATTACTGCTTCAAAGACATATCT +
Preference number: 3 (lower is better)
Translates to: ILHVDLSYFCIM*YPSNYCFKDIS
Trigger: AGATATGTCTTTGAAGCAGTAATTCGATGGATAGCACATGATACAGAAATAAGAAAGGTCCACATGAAGGAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648349.2
3UTR CCA 72 bp ATAAAAACCTTACACCTTCTCTTATCAGGTATCTTCTaGCTAAAATGGAGAGTTAATGTACCACACTCAACA +
Preference number: 3 (lower is better)
Translates to: IKTLHLLLSGIF*LKWRVNVPHST
Trigger: TGTTGAGTGTGGTACATTAACTCTCCATTTTAGCCAGAAGATACCTGATAAGAGAAGGTGTAAGGTTTTTAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
CDS-3UTR GCA 90 bp GGACTTGCAAGTTACCATCTCGCTACCCTGGGCGTCCTCACGACTTCGGACTCCGGAGCCCCCGGGACGTaGCTGTGCTATCCGCGGCGC +
Preference number: 4 (lower is better)
Translates to: GLASYHLATLGVLTTSDSGAPGT*LCYPRR
Trigger: GCGCCGCGGATAGCACAGGCACGTCCCGGGGGCTCC...GGAGTCCGAAGTCGTGAGGACGCCCAGGGTAGCGAGATGGTAACTTGCAAGTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648349.2
CDS-3UTR GCA 90 bp ATCTCGCTACCCTGGGCGTCCTCACGACTTCGGACTCCCCCAAACACATACAGCCCGTCGAGGACCAGGTaGGCGTCGCAGAAGCGAGAC +
Preference number: 4 (lower is better)
Translates to: ISLPWASSRLRTPPNTYSPSRTR*ASQKRD
Trigger: GTCTCGCTTCTGCGACGCGCACCTGGTCCTCGACGG...GCTGTATGTGTTTGGGGGAGTCCGAAGTCGTGAGGACGCCCAGGGTAGCGAGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000650388.1
CDS-3UTR GCA 90 bp AGCTGGTTGTGGAAAGTGCTAGTATGCAGGTCTGCTCAGGGATCTGTGAGGCTCGCCACGCCGGCCACCTaGTGGGCCAGGGACCACTGC +
Preference number: 4 (lower is better)
Translates to: SWLWKVLVCRSAQGSVRLATPAT*WARDHC
Trigger: GCAGTGGTCCCTGGCCCAGCAGGTGGCCGGCGTGGC...GAGCCTCACAGATCCCTGAGCAGACCTGCATACTAGCACTTTCCACAACCAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR TCA 90 bp CATCCTGTACGGCGAAGGTCGGATGGAAGGAGTGGTTTAGTGTGGTGCCAGGTTCCTCGCGGAAAGAGCTaGGCGCTCGCAGCAGACGCG +
Preference number: 4 (lower is better)
Translates to: HPVRRRSDGRSGLVWCQVPRGKS*ALAADA
Trigger: CGCGTCTGCTGCGAGCGCTCAGCTCTTTCCGCGAGG...AACCTGGCACCACACTAAACCACTCCTTCCATCCGACCTTCGCCGTACAGGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000650388.1
CDS-3UTR GCA 90 bp TTCTTCCGTGCTGCTGACGTCTCGGAAATGAGTCTCCAGGTATTCTGTGGCAAGCCCGGGACGTGCCTGTaGTATCCGCGGCGCGCTGGG +
Preference number: 4 (lower is better)
Translates to: FFRAADVSEMSLQVFCGKPGTCL*YPRRAG
Trigger: CCCAGCGCGCCGCGGATAGCACAGGCACGTCCCGGG...CTTGCCACAGAATACCTGGAGACTCATTTCCGAGACGTCAGCAGCACGGAAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648349.2
3UTR CAA 72 bp CTAGCCTACAGGTGCCTAAGGCGCTGGGATGTGTCCTaGGCGGTGCCTCAGAAGGCACCTGGGTCCAAGTTC +
Preference number: 4 (lower is better)
Translates to: LAYRCLRRWDVS*AVPQKAPGSKF
Trigger: GAACTTGGACCCAGGTGCCTTCTGAGGCACCGCCAAGGACACATCCCAGCGCCTTAGGCACCTGTAGGCTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR TCA 90 bp CACATACAGCTCCATAGCAACTCCACAGGCCACCGCTCCAAACCTCCTCTCTTTAGACGCGCGGCGTGCTaGGGGTCAGACACGGCACTG +
Preference number: 4 (lower is better)
Translates to: HIQLHSNSTGHRSKPPLFRRAAC*GSDTAL
Trigger: CAGTGCCGTGTCTGACCCTCAGCACGCCGCGCGTCT...AAAGAGAGGAGGTTTGGAGCGGTGGCCTGTGGAGTTGCTATGGAGCTGTATGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000650388.1
CDS-3UTR GCA 90 bp AAGGTTGCCGTGCCAACCTCCCCTAGGGCAGGAGAAACAACTGGCATATGTTCAGGTCAGACACGGCACTaGCCTCAGCCATCGCGGCGC +
Preference number: 4 (lower is better)
Translates to: KVAVPTSPRAGETTGICSGQTRH*PQPSRR
Trigger: GCGCCGCGATGGCTGAGGGCAGTGCCGTGTCTGACC...TGAACATATGCCAGTTGTTTCTCCTGCCCTAGGGGAGGTTGGCACGGCAACCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR CAA 72 bp CCATCAGCAAGGCTACCCACCTACGGAGTGGGAAGGTaGCCGTGCCAACCTCCCCTAGGGCAGGAGAAACAA +
Preference number: 4 (lower is better)
Translates to: PSARLPTYGVGR*PCQPPLGQEKQ
Trigger: TTGTTTCTCCTGCCCTAGGGGAGGTTGGCACGGCAACCTTCCCACTCCGTAGGTGGGTAGCCTTGCTGATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR TCA 90 bp CTCTCCCTTTCGGAGCTATGTTATGGTGCTCTTGGGTCAGGATCTCGCACTCTGGGCAGGAGGATCCCTTaGGCCTGGGAGATGGCGCCA +
Preference number: 4 (lower is better)
Translates to: LSLSELCYGALGSGSRTLGRRIP*AWEMAP
Trigger: TGGCGCCATCTCCCAGGCTCAAGGGATCCTCCTGCC...CAGAGTGCGAGATCCTGACCCAAGAGCACCATAACATAGCTCCGAAAGGGAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR GCA 90 bp CAGTTCGATCCAAAGCTGCCTGTTAGGGTCATAGAGAGGGCACATGCATCGCATGGTCAGACACGGCACTaGCCTCAGCCATCGCGGCGC +
Preference number: 4 (lower is better)
Translates to: QFDPKLPVRVIERAHASHGQTRH*PQPSRR
Trigger: GCGCCGCGATGGCTGAGGGCAGTGCCGTGTCTGACC...ATGCGATGCATGTGCCCTCTCTATGACCCTAACAGGCAGCTTTGGATCGAACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648349.2
CDS-3UTR GCA 90 bp CATAGAGAGGGCACATGCATCGCATCGCTGCTGTGGGTTTCCGTGAAACTCTCTAGCATCGCCTCCCCTTaGTGCGGCTGGCTGAGCGGT +
Preference number: 4 (lower is better)
Translates to: HREGTCIASLLWVSVKLSSIASP*CGWLSG
Trigger: ACCGCTCAGCCAGCCGCAGCAAGGGGAGGCGATGCT...AGAGAGTTTCACGGAAACCCACAGCAGCGATGCGATGCATGTGCCCTCTCTATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000650388.1
CDS-3UTR GCA 90 bp CTCTCCCTTTCGGAGCTATGTTATGGTGCTCTTGGGTCAGGATCTCGCACTCTGAGCATCGCCTCCCCTTaGTGCGGCTGGCTGAGCGGT +
Preference number: 4 (lower is better)
Translates to: LSLSELCYGALGSGSRTLSIASP*CGWLSG
Trigger: ACCGCTCAGCCAGCCGCAGCAAGGGGAGGCGATGCT...CAGAGTGCGAGATCCTGACCCAAGAGCACCATAACATAGCTCCGAAAGGGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
CDS-3UTR GCA 90 bp GCTGCAGGCGGAAAAGCTTGCAATTCGCAATGCGTAAGGCTGCACATCCTGTACAGCATCGCCTCCCCTTaGTGCGGCTGGCTGAGCGGT +
Preference number: 4 (lower is better)
Translates to: AAGGKACNSQCVRLHILYSIASP*CGWLSG
Trigger: ACCGCTCAGCCAGCCGCAGCAAGGGGAGGCGATGCT...GTACAGGATGTGCAGCCTTACGCATTGCGAATTGCAAGCTTTTCCGCCTGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000650388.1
CDS-3UTR GCA 90 bp GTTACCATCTCGCTACCCTGGGCGTCCTCACGACTTCGGACTCCCCCAAACACACACCAACAGTCACGATaGACTCAGAGTAGCCCCGGG +
Preference number: 4 (lower is better)
Translates to: VTISLPWASSRLRTPPNTHQQSR*TQSSPG
Trigger: CCCGGGGCTACTCTGAGTGCATCGTGACTGTTGGTG...TGTGTTTGGGGGAGTCCGAAGTCGTGAGGACGCCCAGGGTAGCGAGATGGTAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000650388.1
CDS-3UTR TCA 90 bp AGTCACGATGCACTCAGAGTAGCCCCGGGGTTTGAAGTTGGCCAGCATCGCCTCCTTGCTGCGGCTGGCTaGGCGGTATATTGCTACACT +
Preference number: 4 (lower is better)
Translates to: SHDALRVAPGFEVGQHRLLAAAG*AVYCYT
Trigger: AGTGTAGCAATATACCGCTCAGCCAGCCGCAGCAAG...GAGGCGATGCTGGCCAACTTCAAACCCCGGGGCTACTCTGAGTGCATCGTGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000650388.1
CDS-3UTR TCA 90 bp GGGTCAGGATCTCGCACTCTGCTCTGCTTCCTCCTCAAGGGGAATGAACACGAAAGTAGCCCCGGGGTTTaGAGTTGGCCAGCATCGCCT +
Preference number: 4 (lower is better)
Translates to: GSGSRTLLCFLLKGNEHESSPGV*SWPASP
Trigger: AGGCGATGCTGGCCAACTTCAAACCCCGGGGCTACT...TTCGTGTTCATTCCCCTTGAGGAGGAAGCAGAGCAGAGTGCGAGATCCTGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648349.2
CDS-3UTR TCA 90 bp ATGGTAGAACTCGGACTTGCAAGTTACCATCTCGCTACCCTGGGCGTCCTCACGAGTAGCCCCGGGGTTTaGAGTTGGCCAGCATCGCCT +
Preference number: 4 (lower is better)
Translates to: MVELGLASYHLATLGVLTSSPGV*SWPASP
Trigger: AGGCGATGCTGGCCAACTTCAAACCCCGGGGCTACT...CGTGAGGACGCCCAGGGTAGCGAGATGGTAACTTGCAAGTCCGAGTTCTACCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000650388.1
CDS-3UTR CCA 90 bp ATGGTAGAACTCGGACTTGCAAGTTACCATCTCGCTACCCTGGGCGTCCTCACGACCATCTCGCTACCCTaGGCGTCCTCACGACTTCGG +
Preference number: 4 (lower is better)
Translates to: MVELGLASYHLATLGVLTTISLP*ASSRLR
Trigger: CCGAAGTCGTGAGGACGCCCAGGGTAGCGAGATGGT...CGTGAGGACGCCCAGGGTAGCGAGATGGTAACTTGCAAGTCCGAGTTCTACCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000650388.1
CDS-3UTR CCA 90 bp AGATCTCCACACTGTCACTACGAAAATGTGCAGACAACAGCTGACTGGTACACACCTGCCCTCCCGGCTTaGAGGGGGAGCCCTGAGGGC +
Preference number: 4 (lower is better)
Translates to: RSPHCHYENVQTTADWYTPALPA*RGSPEG
Trigger: GCCCTCAGGGCTCCCCCTCCAAGCCGGGAGGGCAGG...TGTGTACCAGTCAGCTGTTGTCTGCACATTTTCGTAGTGACAGTGTGGAGATCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CCA 90 bp AGCTGGTTGTGGAAAGTGCTAGTATGCAGGTCTGCTCAGGGATCTGTGAGGCTCAGGACTCTGCGGAGGTaGGCAGAGCAGGGGGTGCTT +
Preference number: 4 (lower is better)
Translates to: SWLWKVLVCRSAQGSVRLRTLRR*AEQGVL
Trigger: AAGCACCCCCTGCTCTGCCCACCTCCGCAGAGTCCT...GAGCCTCACAGATCCCTGAGCAGACCTGCATACTAGCACTTTCCACAACCAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CCA 90 bp AAGATCTCCCGAGAGGAAGAGTCTTGCCTACAACTGGTGAGCCTCCTCATCTTCACGCCGGCCACCTGCTaGGCCAGGGACCACTGCAAA +
Preference number: 4 (lower is better)
Translates to: KISREEESCLQLVSLLIFTPATC*ARDHCK
Trigger: TTTGCAGTGGTCCCTGGCCCAGCAGGTGGCCGGCGT...GAAGATGAGGAGGCTCACCAGTTGTAGGCAAGACTCTTCCTCTCGGGAGATCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR TCA 90 bp GAACCCCATAGGCACAGCATCTTTCAGCAACTTTTGACGCATTGTACTGACTTCCGGCTCTCCGCGCTCTaGGCAGAAGCTGGAGCCCCC +
Preference number: 4 (lower is better)
Translates to: EPHRHSIFQQLLTHCTDFRLSAL*AEAGAP
Trigger: GGGGGCTCCAGCTTCTGCTCAGAGCGCGGAGAGCCG...GAAGTCAGTACAATGCGTCAAAAGTTGCTGAAAGATGCTGTGCCTATGGGGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
CDS-3UTR TCA 90 bp GGAGGAACTCACTCCTCCCAGGTAGTTTTTCAACAGTTACGTGTTCTCCCAAACAGACGCGCGGCGTGCTaGGGGTCAGACACGGCACTG +
Preference number: 4 (lower is better)
Translates to: GGTHSSQVVFQQLRVLPNRRAAC*GSDTAL
Trigger: CAGTGCCGTGTCTGACCCTCAGCACGCCGCGCGTCT...GTTTGGGAGAACACGTAACTGTTGAAAAACTACCTGGGAGGAGTGAGTTCCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
CDS-3UTR TCA 90 bp TTGCAAGTTACCATCTCGCTACCCTGGGCGTCCTCACGACTTCGGACTCCCCCAAAGCCCAGCACAGAGTaGGTTTCAGCTGCCATCTCT +
Preference number: 4 (lower is better)
Translates to: LQVTISLPWASSRLRTPPKPSTE*VSAAIS
Trigger: AGAGATGGCAGCTGAAACTCACTCTGTGCTGGGCTT...TGGGGGAGTCCGAAGTCGTGAGGACGCCCAGGGTAGCGAGATGGTAACTTGCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648349.2
CDS-3UTR GCA 90 bp CTCTCCCTTTCGGAGCTATGTTATGGTGCTCTTGGGTCAGGATCTCGCACTCTGCCCTTGGTGACGACGTaGCCCATCAGCAAGGCTACC +
Preference number: 4 (lower is better)
Translates to: LSLSELCYGALGSGSRTLPLVTT*PISKAT
Trigger: GGTAGCCTTGCTGATGGGGCACGTCGTCACCAAGGG...CAGAGTGCGAGATCCTGACCCAAGAGCACCATAACATAGCTCCGAAAGGGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CCA 90 bp GTTACCATCTCGCTACCCTGGGCGTCCTCACGACTTCGGACTCCCCCAAACACAACGGCGAAGGTCGGATaGAAGGAGTGGTTTAGTGTG +
Preference number: 4 (lower is better)
Translates to: VTISLPWASSRLRTPPNTTAKVG*KEWFSV
Trigger: CACACTAAACCACTCCTTCCATCCGACCTTCGCCGT...TGTGTTTGGGGGAGTCCGAAGTCGTGAGGACGCCCAGGGTAGCGAGATGGTAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000650388.1
CDS-3UTR CCA 90 bp ACAGTTCCTAGTGGGTGCTCATCAGACATGTGTTGGCTGACCCAAGGCGGGTTTGGAGGCGACCACGTGTaGAGTGCAGAAGGCGCATAC +
Preference number: 4 (lower is better)
Translates to: TVPSGCSSDMCWLTQGGFGGDHV*SAEGAY
Trigger: GTATGCGCCTTCTGCACTCCACACGTGGTCGCCTCC...AAACCCGCCTTGGGTCAGCCAACACATGTCTGATGAGCACCCACTAGGAACTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR CAA 72 bp GGGACAGATCTGACTCTCACAGCCAGGGCCAGCTGGTaGTGGAAAGTGCTAGTATGCAGGTCTGCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: GTDLTLTARASW*WKVLVCRSAQG
Trigger: TCCCTGAGCAGACCTGCATACTAGCACTTTCCACAACCAGCTGGCCCTGGCTGTGAGAGTCAGATCTGTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR TCA 90 bp CTTGCAAGTTACCATCTCGCTACCCTGGGCGTCCTCACGACTTCGGACTCCCCCAGCAGGTCAGCTGCCTaGACAACATCTTGGATTGTA +
Preference number: 4 (lower is better)
Translates to: LASYHLATLGVLTTSDSPSRSAA*TTSWIV
Trigger: TACAATCCAAGATGTTGTTCAGGCAGCTGACCTGCT...GGGGGAGTCCGAAGTCGTGAGGACGCCCAGGGTAGCGAGATGGTAACTTGCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648349.2
CDS-3UTR TCA 90 bp ATAAGCCTTGCTGAAGCTGCAGGCGGAAAAGCTTGCAATTCGCAATGCGTAAGGTCCTTCATGTGGACCTaGTGTACGGGCTGGCCGCCG +
Preference number: 4 (lower is better)
Translates to: ISLAEAAGGKACNSQCVRSFMWT*CTGWPP
Trigger: CGGCGGCCAGCCCGTACATCAGGTCCACATGAAGGA...CCTTACGCATTGCGAATTGCAAGCTTTTCCGCCTGCAGCTTCAGCAAGGCTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650388.1
CDS-3UTR GCA 90 bp AAGATCTCCCGAGAGGAAGAGTCTTGCCTACAACTGGTGAGCCTCCTCATCTTCATCGCCTCCCCTTGCTaGGGCTGGCTGAGCGGTATA +
Preference number: 4 (lower is better)
Translates to: KISREEESCLQLVSLLIFIASPC*GWLSGI
Trigger: TATACCGCTCAGCCAGCCGCAGCAAGGGGAGGCGAT...GAAGATGAGGAGGCTCACCAGTTGTAGGCAAGACTCTTCCTCTCGGGAGATCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR GCA 90 bp TGCACATCCTGTACGGCGAAGGTCGGATGGAAGGAGTGGTTTAGTGTGGTGCCACATAGAGAGGGCACATaGATCGCATCGCTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: CTSCTAKVGWKEWFSVVPHREGT*IASLLW
Trigger: CCACAGCAGCGATGCGATGCATGTGCCCTCTCTATG...TGGCACCACACTAAACCACTCCTTCCATCCGACCTTCGCCGTACAGGATGTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000650388.1
CDS-3UTR GCA 90 bp CTCTCCCTTTCGGAGCTATGTTATGGTGCTCTTGGGTCAGGATCTCGCACTCTGAAGGCAGAATGGCACTaGAGGAGACCCTTCCCGGCT +
Preference number: 4 (lower is better)
Translates to: LSLSELCYGALGSGSRTLKAEWH*RRPFPA
Trigger: AGCCGGGAAGGGTCTCCTGCAGTGCCATTCTGCCTT...CAGAGTGCGAGATCCTGACCCAAGAGCACCATAACATAGCTCCGAAAGGGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
CDS-3UTR GCA 90 bp CTCTCCCTTTCGGAGCTATGTTATGGTGCTCTTGGGTCAGGATCTCGCACTCTGCTCCGCTCTGGCGAATaGGAGCTGCAAAGGGACAGA +
Preference number: 4 (lower is better)
Translates to: LSLSELCYGALGSGSRTLLRSGE*ELQRDR
Trigger: TCTGTCCCTTTGCAGCTCGCATTCGCCAGAGCGGAG...CAGAGTGCGAGATCCTGACCCAAGAGCACCATAACATAGCTCCGAAAGGGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR GCA 90 bp AAGATCTCCCGAGAGGAAGAGTCTTGCCTACAACTGGTGAGCCTCCTCATCTTCGGGCAGAGCAGGGGGTaGTTTTGTCAGCTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: KISREEESCLQLVSLLIFGQSRG*FCQLCW
Trigger: CCAGCAGAGCTGACAAAAGCACCCCCTGCTCTGCCC...GAAGATGAGGAGGCTCACCAGTTGTAGGCAAGACTCTTCCTCTCGGGAGATCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CCA 90 bp AGCATCGCCTCCCCTTGCTGCGGCTGGCTGAGCGGTATATTGCTACACTCTTTGACGGCGAAGGTCGGATaGAAGGAGTGGTTTAGTGTG +
Preference number: 4 (lower is better)
Translates to: SIASPCCGWLSGILLHSLTAKVG*KEWFSV
Trigger: CACACTAAACCACTCCTTCCATCCGACCTTCGCCGT...CAAAGAGTGTAGCAATATACCGCTCAGCCAGCCGCAGCAAGGGGAGGCGATGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000650388.1
CDS-3UTR CCA 90 bp GGGTCAGGATCTCGCACTCTGCTCTGCTTCCTCCTCAAGGGGAATGAACACGAAGCGGCACATCTGGCCTaGTGCCTCTGGCATATAAGA +
Preference number: 4 (lower is better)
Translates to: GSGSRTLLCFLLKGNEHEAAHLA*CLWHIR
Trigger: TCTTATATGCCAGAGGCACCAGGCCAGATGTGCCGC...TTCGTGTTCATTCCCCTTGAGGAGGAAGCAGAGCAGAGTGCGAGATCCTGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648349.2
CDS-3UTR CCA 90 bp AAGATCTCCCGAGAGGAAGAGTCTTGCCTACAACTGGTGAGCCTCCTCATCTTCGTAGTCCCAGCTACTTaGCAGGCCGAGGCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: KISREEESCLQLVSLLIFVVPAT*QAEAGG
Trigger: TCCTCCTGCCTCGGCCTGCCAAGTAGCTGGGACTAC...GAAGATGAGGAGGCTCACCAGTTGTAGGCAAGACTCTTCCTCTCGGGAGATCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CCA 90 bp CTCTCCCTTTCGGAGCTATGTTATGGTGCTCTTGGGTCAGGATCTCGCACTCTGGCCTCAGAAGGCACCTaGGTCCAAGTTCTGACCTGG +
Preference number: 4 (lower is better)
Translates to: LSLSELCYGALGSGSRTLASEGT*VQVLTW
Trigger: CCAGGTCAGAACTTGGACCCAGGTGCCTTCTGAGGC...CAGAGTGCGAGATCCTGACCCAAGAGCACCATAACATAGCTCCGAAAGGGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CCA 90 bp AAGATCTCCCGAGAGGAAGAGTCTTGCCTACAACTGGTGAGCCTCCTCATCTTCGCTGGGATGTGTCCTTaGCGGTGCCTCAGAAGGCAC +
Preference number: 4 (lower is better)
Translates to: KISREEESCLQLVSLLIFAGMCP*RCLRRH
Trigger: GTGCCTTCTGAGGCACCGCCAAGGACACATCCCAGC...GAAGATGAGGAGGCTCACCAGTTGTAGGCAAGACTCTTCCTCTCGGGAGATCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CCA 90 bp ACAGTTCCTAGTGGGTGCTCATCAGACATGTGTTGGCTGACCCAAGGCGGGTTTGGTCCAGCACAACACTaGCATGAGCCAACAGGAGCC +
Preference number: 4 (lower is better)
Translates to: TVPSGCSSDMCWLTQGGFGPAQH*HEPTGA
Trigger: GGCTCCTGTTGGCTCATGCCAGTGTTGTGCTGGACC...AAACCCGCCTTGGGTCAGCCAACACATGTCTGATGAGCACCCACTAGGAACTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR CAA 72 bp CTCTGCTCTCCCTTTCGGAGCTATGTTATGGTGCTCTaGGGTCAGGATCTCGCACTCTGCTCTGCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: LCSPFRSYVMVL*GQDLALCSASS
Trigger: GGAGGAAGCAGAGCAGAGTGCGAGATCCTGACCCAAGAGCACCATAACATAGCTCCGAAAGGGAGAGCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
CDS-3UTR TCA 90 bp ATCTCGCTACCCTGGGCGTCCTCACGACTTCGGACTCCCCCAAACACATACAGCCCCAATTACAGCTGCTaGATGCCAAGGTACTGTTCT +
Preference number: 4 (lower is better)
Translates to: ISLPWASSRLRTPPNTYSPNYSC*MPRYCS
Trigger: AGAACAGTACCTTGGCATTCAGCAGCTGTAATTGGG...GCTGTATGTGTTTGGGGGAGTCCGAAGTCGTGAGGACGCCCAGGGTAGCGAGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648349.2
CDS-3UTR GCA 90 bp AAGATCTCCCGAGAGGAAGAGTCTTGCCTACAACTGGTGAGCCTCCTCATCTTCCACCAACAGTCACGATaGACTCAGAGTAGCCCCGGG +
Preference number: 4 (lower is better)
Translates to: KISREEESCLQLVSLLIFHQQSR*TQSSPG
Trigger: CCCGGGGCTACTCTGAGTGCATCGTGACTGTTGGTG...GAAGATGAGGAGGCTCACCAGTTGTAGGCAAGACTCTTCCTCTCGGGAGATCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR GCA 90 bp AGCTGGTTGTGGAAAGTGCTAGTATGCAGGTCTGCTCAGGGATCTGTGAGGCTCCATAGAGAGGGCACATaGATCGCATCGCTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: SWLWKVLVCRSAQGSVRLHREGT*IASLLW
Trigger: CCACAGCAGCGATGCGATGCATGTGCCCTCTCTATG...GAGCCTCACAGATCCCTGAGCAGACCTGCATACTAGCACTTTCCACAACCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR GCA 90 bp CTCTCCCTTTCGGAGCTATGTTATGGTGCTCTTGGGTCAGGATCTCGCACTCTGCAGGATCTCGCACTCTaGTCTGCTTCCTCCTCAAGG +
Preference number: 4 (lower is better)
Translates to: LSLSELCYGALGSGSRTLQDLAL*SASSSR
Trigger: CCTTGAGGAGGAAGCAGAGCAGAGTGCGAGATCCTG...CAGAGTGCGAGATCCTGACCCAAGAGCACCATAACATAGCTCCGAAAGGGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
CDS-3UTR GCA 90 bp ACAGTCCAATCTAACATTTTAGGCACAAACCTTAATTTGTTGGGCAGGGTTAGGGGGCCTGTGCCTGCCTaGCCTCCCGGCTTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: TVQSNILGTNLNLLGRVRGPVPA*PPGLEG
Trigger: CCCCTCCAAGCCGGGAGGGCAGGCAGGCACAGGCCC...CCTAACCCTGCCCAACAAATTAAGGTTTGTGCCTAAAATGTTAGATTGGACTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CCA 90 bp ACAGTTCCTAGTGGGTGCTCATCAGACATGTGTTGGCTGACCCAAGGCGGGTTTCGGCAATCCCTAAGCTaGCAGAGAAAGATGCGCCGA +
Preference number: 4 (lower is better)
Translates to: TVPSGCSSDMCWLTQGGFRQSLS*QRKMRR
Trigger: TCGGCGCATCTTTCTCTGCCAGCTTAGGGATTGCCG...AAACCCGCCTTGGGTCAGCCAACACATGTCTGATGAGCACCCACTAGGAACTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR CAA 72 bp CGACTCCGAACATGGCCAAAATACCCTTCCTCCACCTaGACGGCAATCCCTAAGCTGGCAGAGAAAGATGCG +
Preference number: 4 (lower is better)
Translates to: RLRTWPKYPSST*TAIPKLAEKDA
Trigger: CGCATCTTTCTCTGCCAGCTTAGGGATTGCCGTCAAGGTGGAGGAAGGGTATTTTGGCCATGTTCGGAGTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR TCA 90 bp ACATGCATCGCATCGCTGCTGTGGGTTTCCGTGAAACTCTCTCTTCTCCACCAACGGAATAAGCCTTGCTaGAGCTGCAGGCGGAAAAGC +
Preference number: 4 (lower is better)
Translates to: TCIASLLWVSVKLSLLHQRNKPC*SCRRKS
Trigger: GCTTTTCCGCCTGCAGCTTCAGCAAGGCTTATTCCG...TTGGTGGAGAAGAGAGAGTTTCACGGAAACCCACAGCAGCGATGCGATGCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000650388.1
CDS-3UTR TCA 90 bp CAGTTCGATCCAAAGCTGCCTGTTAGGGTCATAGAGAGGGCACATGCATCGCATCGGAATAAGCCTTGCTaGAGCTGCAGGCGGAAAAGC +
Preference number: 4 (lower is better)
Translates to: QFDPKLPVRVIERAHASHRNKPC*SCRRKS
Trigger: GCTTTTCCGCCTGCAGCTTCAGCAAGGCTTATTCCG...ATGCGATGCATGTGCCCTCTCTATGACCCTAACAGGCAGCTTTGGATCGAACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000650388.1
CDS-3UTR TCA 90 bp GTTACCATCTCGCTACCCTGGGCGTCCTCACGACTTCGGACTCCCCCAAACACAAGGAATCAAGCACTTTaGAGTCCCCGATTTCACACT +
Preference number: 4 (lower is better)
Translates to: VTISLPWASSRLRTPPNTRNQAL*SPRFHT
Trigger: AGTGTGAAATCGGGGACTTCAAAGTGCTTGATTCCT...TGTGTTTGGGGGAGTCCGAAGTCGTGAGGACGCCCAGGGTAGCGAGATGGTAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648349.2
CDS-3UTR TCA 90 bp CCCCATAGGCACAGCATCTTTCAGCAACTTTTGACGCATTGTACTGACTTCCAGCCTTGGGGACAGATCTaGCTCTCACAGCCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: PHRHSIFQQLLTHCTDFQPWGQI*LSQPGP
Trigger: TGGCCCTGGCTGTGAGAGTCAGATCTGTCCCCAAGG...CTGGAAGTCAGTACAATGCGTCAAAAGTTGCTGAAAGATGCTGTGCCTATGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR TCA 90 bp AAGGTTGCCGTGCCAACCTCCCCTAGGGCAGGAGAAACAACTGGCATATGTTCACTGCTGAGGCCACAATaGTTACGGGATGGTTGTCAC +
Preference number: 4 (lower is better)
Translates to: KVAVPTSPRAGETTGICSLLRPQ*LRDGCH
Trigger: GTGACAACCATCCCGTAATCATTGTGGCCTCAGCAG...TGAACATATGCCAGTTGTTTCTCCTGCCCTAGGGGAGGTTGGCACGGCAACCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR GCA 90 bp ATGGTAGAACTCGGACTTGCAAGTTACCATCTCGCTACCCTGGGCGTCCTCACGGCTTGCAATTCGCAATaGGTAAGGCTGCACATCCTG +
Preference number: 4 (lower is better)
Translates to: MVELGLASYHLATLGVLTACNSQ*VRLHIL
Trigger: CAGGATGTGCAGCCTTACGCATTGCGAATTGCAAGC...CGTGAGGACGCCCAGGGTAGCGAGATGGTAACTTGCAAGTCCGAGTTCTACCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000650388.1
CDS-3UTR GCA 90 bp GGACTTGCAAGTTACCATCTCGCTACCCTGGGCGTCCTCACGACTTCGGACTCCGTCACTACGAAAATGTaGAGACAACAGCTGACTGGT +
Preference number: 4 (lower is better)
Translates to: GLASYHLATLGVLTTSDSVTTKM*RQQLTG
Trigger: ACCAGTCAGCTGTTGTCTGCACATTTTCGTAGTGAC...GGAGTCCGAAGTCGTGAGGACGCCCAGGGTAGCGAGATGGTAACTTGCAAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648349.2
CDS-3UTR GCA 90 bp AGATCTCCACACTGTCACTACGAAAATGTGCAGACAACAGCTGACTGGTACACAGTTGCCCGGCTGGAGTaGAACGGCACCATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: RSPHCHYENVQTTADWYTVARLE*NGTISA
Trigger: AGCCGAGATGGTGCCGTTGCACTCCAGCCGGGCAAC...TGTGTACCAGTCAGCTGTTGTCTGCACATTTTCGTAGTGACAGTGTGGAGATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR GCA 90 bp ACAGTTCCTAGTGGGTGCTCATCAGACATGTGTTGGCTGACCCAAGGCGGGTTTGCGCCGACTGCGAAGTaGCTGTTTTCTCAGAGATTC +
Preference number: 4 (lower is better)
Translates to: TVPSGCSSDMCWLTQGGFAPTAK*LFSQRF
Trigger: GAATCTCTGAGAAAACAGGCACTTCGCAGTCGGCGC...AAACCCGCCTTGGGTCAGCCAACACATGTCTGATGAGCACCCACTAGGAACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR GCA 90 bp ACAGTCCAATCTAACATTTTAGGCACAAACCTTAATTTGTTGGGCAGGGTTAGGAGTGAGCGGGGCCTGTaGCTGCCTGCCCTCCCGGCT +
Preference number: 4 (lower is better)
Translates to: TVQSNILGTNLNLLGRVRSERGL*LPALPA
Trigger: AGCCGGGAGGGCAGGCAGGCACAGGCCCCGCTCACT...CCTAACCCTGCCCAACAAATTAAGGTTTGTGCCTAAAATGTTAGATTGGACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CCA 90 bp GCCTCGTTCATAGGTGGCAATGCTGTCCATGTATTTGCATCTGGATCATACTTTGCTCTGAGCAGAAGCTaGAGCCCCCGGGACGTGCCT +
Preference number: 4 (lower is better)
Translates to: ASFIGGNAVHVFASGSYFALSRS*SPRDVP
Trigger: AGGCACGTCCCGGGGGCTCCAGCTTCTGCTCAGAGC...AAAGTATGATCCAGATGCAAATACATGGACAGCATTGCCACCTATGAACGAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648349.2
CDS-3UTR CCA 90 bp AAGGCTGCACATCCTGTACGGCGAAGGTCGGATGGAAGGAGTGGTTTAGTGTGGATCGCATCGCTGCTGTaGGTTTCCGTGAAACTCTCT +
Preference number: 4 (lower is better)
Translates to: KAAHPVRRRSDGRSGLVWIASLL*VSVKLS
Trigger: AGAGAGTTTCACGGAAACCCACAGCAGCGATGCGAT...CCACACTAAACCACTCCTTCCATCCGACCTTCGCCGTACAGGATGTGCAGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000650388.1
CDS-3UTR CCA 90 bp TGCACATCCTGTACGGCGAAGGTCGGATGGAAGGAGTGGTTTAGTGTGGTGCCATCCACTGCTGGGTCCTaGGATCATAACACTCTACAG +
Preference number: 4 (lower is better)
Translates to: CTSCTAKVGWKEWFSVVPSTAGS*DHNTLQ
Trigger: CTGTAGAGTGTTATGATCCCAGGACCCAGCAGTGGA...TGGCACCACACTAAACCACTCCTTCCATCCGACCTTCGCCGTACAGGATGTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000650388.1
CDS-3UTR CCA 90 bp CACATACAGCTCCATAGCAACTCCACAGGCCACCGCTCCAAACCTCCTCTCTTTGTCGGATGGAAGGAGTaGTTTAGTGTGGTGCCAGGT +
Preference number: 4 (lower is better)
Translates to: HIQLHSNSTGHRSKPPLFVGWKE*FSVVPG
Trigger: ACCTGGCACCACACTAAACCACTCCTTCCATCCGAC...AAAGAGAGGAGGTTTGGAGCGGTGGCCTGTGGAGTTGCTATGGAGCTGTATGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000650388.1
CDS-3UTR CCA 90 bp ACAGTTCCTAGTGGGTGCTCATCAGACATGTGTTGGCTGACCCAAGGCGGGTTTAGGGCCAGCTGGTTGTaGAAAGTGCTAGTATGCAGG +
Preference number: 4 (lower is better)
Translates to: TVPSGCSSDMCWLTQGGFRASWL*KVLVCR
Trigger: CCTGCATACTAGCACTTTCCACAACCAGCTGGCCCT...AAACCCGCCTTGGGTCAGCCAACACATGTCTGATGAGCACCCACTAGGAACTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CCA 90 bp ACAGTTCCTAGTGGGTGCTCATCAGACATGTGTTGGCTGACCCAAGGCGGGTTTACAGCCAGGGCCAGCTaGTTGTGGAAAGTGCTAGTA +
Preference number: 4 (lower is better)
Translates to: TVPSGCSSDMCWLTQGGFTARAS*LWKVLV
Trigger: TACTAGCACTTTCCACAACCAGCTGGCCCTGGCTGT...AAACCCGCCTTGGGTCAGCCAACACATGTCTGATGAGCACCCACTAGGAACTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR CAA 72 bp CTCATCAGACATGTGTTGGCTGACCCAAGGCGGGTTTaGCTACACTCAGCTGCTCTCTTCTCACTGACTTCC +
Preference number: 4 (lower is better)
Translates to: LIRHVLADPRRV*LHSAALFSLTS
Trigger: GGAAGTCAGTGAGAAGAGAGCAGCTGAGTGTAGCAAAACCCGCCTTGGGTCAGCCAACACATGTCTGATGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR TCA 90 bp AGATCTCCACACTGTCACTACGAAAATGTGCAGACAACAGCTGACTGGTACACAAGTAGCCCCGGGGTTTaGAGTTGGCCAGCATCGCCT +
Preference number: 4 (lower is better)
Translates to: RSPHCHYENVQTTADWYTSSPGV*SWPASP
Trigger: AGGCGATGCTGGCCAACTTCAAACCCCGGGGCTACT...TGTGTACCAGTCAGCTGTTGTCTGCACATTTTCGTAGTGACAGTGTGGAGATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
CDS-3UTR TCA 90 bp GGACTTGCAAGTTACCATCTCGCTACCCTGGGCGTCCTCACGACTTCGGACTCCTTTGACGCATTGTACTaGCTTCCAGCAGGTATAAGA +
Preference number: 4 (lower is better)
Translates to: GLASYHLATLGVLTTSDSFDALY*LPAGIR
Trigger: TCTTATACCTGCTGGAAGTCAGTACAATGCGTCAAA...GGAGTCCGAAGTCGTGAGGACGCCCAGGGTAGCGAGATGGTAACTTGCAAGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648349.2
CDS-3UTR TCA 90 bp GACTTGCAAGTTACCATCTCGCTACCCTGGGCGTCCTCACGACTTCGGACTCCCTGTGCAGACAACAGCTaGCTGGTACACAAAACAATT +
Preference number: 4 (lower is better)
Translates to: DLQVTISLPWASSRLRTPCADNS*LVHKTI
Trigger: AATTGTTTTGTGTACCAGTCAGCTGTTGTCTGCACA...GGGAGTCCGAAGTCGTGAGGACGCCCAGGGTAGCGAGATGGTAACTTGCAAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648349.2
CDS-3UTR TCA 90 bp AAGATCTCCCGAGAGGAAGAGTCTTGCCTACAACTGGTGAGCCTCCTCATCTTCAGTAGGAGAGTGGTGTaGCCTCTGCCTCACTGTTCA +
Preference number: 4 (lower is better)
Translates to: KISREEESCLQLVSLLIFSRRVV*PLPHCS
Trigger: TGAACAGTGAGGCAGAGGTCACACCACTCTCCTACT...GAAGATGAGGAGGCTCACCAGTTGTAGGCAAGACTCTTCCTCTCGGGAGATCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR TCA 90 bp AGCTGGTTGTGGAAAGTGCTAGTATGCAGGTCTGCTCAGGGATCTGTGAGGCTCAGCAGTCAATACCACTaGGACTTAACTGCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: SWLWKVLVCRSAQGSVRLSSQYH*DLTASR
Trigger: CCTGCTGGCAGTTAAGTCTCAGTGGTATTGACTGCT...GAGCCTCACAGATCCCTGAGCAGACCTGCATACTAGCACTTTCCACAACCAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR TCA 90 bp CTCTCCCTTTCGGAGCTATGTTATGGTGCTCTTGGGTCAGGATCTCGCACTCTGCAACCAGAAGACAGATaGACCTCCGTTTGGGATGTG +
Preference number: 4 (lower is better)
Translates to: LSLSELCYGALGSGSRTLQPEDR*TSVWDV
Trigger: CACATCCCAAACGGAGGTTCATCTGTCTTCTGGTTG...CAGAGTGCGAGATCCTGACCCAAGAGCACCATAACATAGCTCCGAAAGGGAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR TCA 90 bp GGAGGAACTCACTCCTCCCAGGTAGTTTTTCAACAGTTACGTGTTCTCCCAAACACCCTTCCTCCACCTTaGCGGCAATCCCTAAGCTGG +
Preference number: 4 (lower is better)
Translates to: GGTHSSQVVFQQLRVLPNTLPPP*RQSLSW
Trigger: CCAGCTTAGGGATTGCCGTCAAGGTGGAGGAAGGGT...GTTTGGGAGAACACGTAACTGTTGAAAAACTACCTGGGAGGAGTGAGTTCCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR TCA 90 bp ACTTCTTTACTTCTTAAGCTGATGATACCCTTTTGCCCGCCCCATGTACCAGATCTGCCTACGCCTACCTaGGGAGCATCCGCGATACCG +
Preference number: 4 (lower is better)
Translates to: TSLLLKLMIPFCPPHVPDLPTPT*GASAIP
Trigger: CGGTATCGCGGATGCTCCTCAGGTAGGCGTAGGCAG...ATCTGGTACATGGGGCGGGCAAAAGGGTATCATCAGCTTAAGAAGTAAAGAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR TCA 90 bp CTCTCCCTTTCGGAGCTATGTTATGGTGCTCTTGGGTCAGGATCTCGCACTCTGACTGCTAACACACAATaGAGTCTGCCTACGCCTACC +
Preference number: 4 (lower is better)
Translates to: LSLSELCYGALGSGSRTLTANTQ*SLPTPT
Trigger: GGTAGGCGTAGGCAGACTTCATTGTGTGTTAGCAGT...CAGAGTGCGAGATCCTGACCCAAGAGCACCATAACATAGCTCCGAAAGGGAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR GCA 90 bp AAAGCTTGCAATTCGCAATGCGTAAGGCTGCACATCCTGTACGGCGAAGGTCGGGCAGGCGGAAAAGCTTaGAATTCGCAATGCGTAAGG +
Preference number: 4 (lower is better)
Translates to: KACNSQCVRLHILYGEGRAGGKA*NSQCVR
Trigger: CCTTACGCATTGCGAATTGCAAGCTTTTCCGCCTGC...CCGACCTTCGCCGTACAGGATGTGCAGCCTTACGCATTGCGAATTGCAAGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000650388.1
CDS-3UTR GCA 90 bp ACAGTTCCTAGTGGGTGCTCATCAGACATGTGTTGGCTGACCCAAGGCGGGTTTCCGGACTCTGTGTGTTaGCATCCTTTTCCACCTGTT +
Preference number: 4 (lower is better)
Translates to: TVPSGCSSDMCWLTQGGFPDSVC*HPFPPV
Trigger: AACAGGTGGAAAAGGATGGCAACACACAGAGTCCGG...AAACCCGCCTTGGGTCAGCCAACACATGTCTGATGAGCACCCACTAGGAACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR GCA 90 bp CTCTCCCTTTCGGAGCTATGTTATGGTGCTCTTGGGTCAGGATCTCGCACTCTGCTCAAGGCCTCTGACTaGCTGCTTCCAAGCTTTTGT +
Preference number: 4 (lower is better)
Translates to: LSLSELCYGALGSGSRTLLKASD*LLPSFC
Trigger: ACAAAAGCTTGGAAGCAGGCAGTCAGAGGCCTTGAG...CAGAGTGCGAGATCCTGACCCAAGAGCACCATAACATAGCTCCGAAAGGGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR GCA 90 bp ACTTCTTTACTTCTTAAGCTGATGATACCCTTTTGCCCGCCCCATGTACCAGATGCCCCCAAGCCCAGATaGACCTGCCACCAAGGCCTA +
Preference number: 4 (lower is better)
Translates to: TSLLLKLMIPFCPPHVPDAPKPR*TCHQGL
Trigger: TAGGCCTTGGTGGCAGGTGCATCTGGGCTTGGGGGC...ATCTGGTACATGGGGCGGGCAAAAGGGTATCATCAGCTTAAGAAGTAAAGAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR GCA 90 bp AGCTGGTTGTGGAAAGTGCTAGTATGCAGGTCTGCTCAGGGATCTGTGAGGCTCGAAAGATGCGCCGACTaGGAAGTGCCTGTTTTCTCA +
Preference number: 4 (lower is better)
Translates to: SWLWKVLVCRSAQGSVRLERCAD*EVPVFS
Trigger: TGAGAAAACAGGCACTTCGCAGTCGGCGCATCTTTC...GAGCCTCACAGATCCCTGAGCAGACCTGCATACTAGCACTTTCCACAACCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CCA 90 bp AGTCACGATGCACTCAGAGTAGCCCCGGGGTTTGAAGTTGGCCAGCATCGCCTCTCTCCAGGTATTCTGTaGCAAGGTAATGAACGTGAT +
Preference number: 4 (lower is better)
Translates to: SHDALRVAPGFEVGQHRLSPGIL*QGNERD
Trigger: ATCACGTTCATTACCTTGCCACAGAATACCTGGAGA...GAGGCGATGCTGGCCAACTTCAAACCCCGGGGCTACTCTGAGTGCATCGTGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648349.2
CDS-3UTR CCA 90 bp ACAGTTCCTAGTGGGTGCTCATCAGACATGTGTTGGCTGACCCAAGGCGGGTTTATCGCATCGCTGCTGTaGGTTTCCGTGAAACTCTCT +
Preference number: 4 (lower is better)
Translates to: TVPSGCSSDMCWLTQGGFIASLL*VSVKLS
Trigger: AGAGAGTTTCACGGAAACCCACAGCAGCGATGCGAT...AAACCCGCCTTGGGTCAGCCAACACATGTCTGATGAGCACCCACTAGGAACTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CCA 90 bp TTGCAATTCGCAATGCGTAAGGCTGCACATCCTGTACGGCGAAGGTCGGATGGACTTTTAGTGGACATATaGCAGTCCACTGCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: LQFAMRKAAHPVRRRSDGLLVDI*QSTAGS
Trigger: GGACCCAGCAGTGGACTGCCATATGTCCACTAAAAG...TCCATCCGACCTTCGCCGTACAGGATGTGCAGCCTTACGCATTGCGAATTGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000650388.1
CDS-3UTR CCA 90 bp AGATCTCCACACTGTCACTACGAAAATGTGCAGACAACAGCTGACTGGTACACAACCATCTCGCTACCCTaGGCGTCCTCACGACTTCGG +
Preference number: 4 (lower is better)
Translates to: RSPHCHYENVQTTADWYTTISLP*ASSRLR
Trigger: CCGAAGTCGTGAGGACGCCCAGGGTAGCGAGATGGT...TGTGTACCAGTCAGCTGTTGTCTGCACATTTTCGTAGTGACAGTGTGGAGATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
CDS-3UTR CCA 90 bp ATGCATCGCATCGCTGCTGTGGGTTTCCGTGAAACTCTCTCTTCTCCACCAACAGTCGGATGGAAGGAGTaGTTTAGTGTGGTGCCAGGT +
Preference number: 4 (lower is better)
Translates to: MHRIAAVGFRETLSSPPTVGWKE*FSVVPG
Trigger: ACCTGGCACCACACTAAACCACTCCTTCCATCCGAC...TGTTGGTGGAGAAGAGAGAGTTTCACGGAAACCCACAGCAGCGATGCGATGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000650388.1
CDS-3UTR CCA 90 bp CCCCATAGGCACAGCATCTTTCAGCAACTTTTGACGCATTGTACTGACTTCCAGTCAGTGAGCAGCCAGTaGAAAAGGGCCGCCTCACCT +
Preference number: 4 (lower is better)
Translates to: PHRHSIFQQLLTHCTDFQSVSSQ*KRAASP
Trigger: AGGTGAGGCGGCCCTTTTCCACTGGCTGCTCACTGA...CTGGAAGTCAGTACAATGCGTCAAAAGTTGCTGAAAGATGCTGTGCCTATGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CCA 90 bp AAGGTTGCCGTGCCAACCTCCCCTAGGGCAGGAGAAACAACTGGCATATGTTCACATGGGGAGCCACAGTaGAACATGGAGAGAACAATC +
Preference number: 4 (lower is better)
Translates to: KVAVPTSPRAGETTGICSHGEPQ*NMERTI
Trigger: GATTGTTCTCTCCATGTTCCACTGTGGCTCCCCATG...TGAACATATGCCAGTTGTTTCTCCTGCCCTAGGGGAGGTTGGCACGGCAACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CCA 90 bp ACAGTTCCTAGTGGGTGCTCATCAGACATGTGTTGGCTGACCCAAGGCGGGTTTCAACGACTCCGAACATaGCCAAAATACCCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: TVPSGCSSDMCWLTQGGFQRLRT*PKYPSS
Trigger: GGAGGAAGGGTATTTTGGCCATGTTCGGAGTCGTTG...AAACCCGCCTTGGGTCAGCCAACACATGTCTGATGAGCACCCACTAGGAACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR TCA 90 bp AATACAAACAAAAATCCTTCTGCTGAGAGAACTCCATGGTTAATTCTCGGCATGCCTCGCGGAAAGAGCTaGGCGCTCGCAGCAGACGCG +
Preference number: 4 (lower is better)
Translates to: NTNKNPSAERTPWLILGMPRGKS*ALAADA
Trigger: CGCGTCTGCTGCGAGCGCTCAGCTCTTTCCGCGAGG...CATGCCGAGAATTAACCATGGAGTTCTCTCAGCAGAAGGATTTTTGTTTGTATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000650388.1
CDS-3UTR TCA 90 bp ACATGCATCGCATCGCTGCTGTGGGTTTCCGTGAAACTCTCTCTTCTCCACCAAATTCTTCCGTGCTGCTaGCGTCTCGGAAATGAGTCT +
Preference number: 4 (lower is better)
Translates to: TCIASLLWVSVKLSLLHQILPCC*RLGNES
Trigger: AGACTCATTTCCGAGACGTCAGCAGCACGGAAGAAT...TTGGTGGAGAAGAGAGAGTTTCACGGAAACCCACAGCAGCGATGCGATGCATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648349.2
CDS-3UTR TCA 90 bp ATCTCGCTACCCTGGGCGTCCTCACGACTTCGGACTCCCCCAAACACATACAGCCAAAAATCCTTCTGCTaGGAGAACTCCATGGTTAAT +
Preference number: 4 (lower is better)
Translates to: ISLPWASSRLRTPPNTYSQKSFC*ENSMVN
Trigger: ATTAACCATGGAGTTCTCTCAGCAGAAGGATTTTTG...GCTGTATGTGTTTGGGGGAGTCCGAAGTCGTGAGGACGCCCAGGGTAGCGAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000650388.1
CDS-3UTR TCA 90 bp CCCCATAGGCACAGCATCTTTCAGCAACTTTTGACGCATTGTACTGACTTCCAGCGGAATAAGCCTTGCTaGAGCTGCAGGCGGAAAAGC +
Preference number: 4 (lower is better)
Translates to: PHRHSIFQQLLTHCTDFQRNKPC*SCRRKS
Trigger: GCTTTTCCGCCTGCAGCTTCAGCAAGGCTTATTCCG...CTGGAAGTCAGTACAATGCGTCAAAAGTTGCTGAAAGATGCTGTGCCTATGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
CDS-3UTR TCA 90 bp AGCATCGCCTCCCCTTGCTGCGGCTGGCTGAGCGGTATATTGCTACACTCTTTGATGAGGGCTGCAACCTaGCTCATCAATTTACTGAAT +
Preference number: 4 (lower is better)
Translates to: SIASPCCGWLSGILLHSLMRAAT*LINLLN
Trigger: ATTCAGTAAATTGATGAGTCAGGTTGCAGCCCTCAT...CAAAGAGTGTAGCAATATACCGCTCAGCCAGCCGCAGCAAGGGGAGGCGATGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648349.2
CDS-3UTR TCA 90 bp CTCTCCCTTTCGGAGCTATGTTATGGTGCTCTTGGGTCAGGATCTCGCACTCTGTGCTGGCTAACATGGTaGAACCCCGTCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: LSLSELCYGALGSGSRTLCWLTW*NPVSTK
Trigger: TTTAGTAGAGACGGGGTTTCACCATGTTAGCCAGCA...CAGAGTGCGAGATCCTGACCCAAGAGCACCATAACATAGCTCCGAAAGGGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR GCA 90 bp GGAGGAACTCACTCCTCCCAGGTAGTTTTTCAACAGTTACGTGTTCTCCCAAACCATAGAGAGGGCACATaGATCGCATCGCTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: GGTHSSQVVFQQLRVLPNHREGT*IASLLW
Trigger: CCACAGCAGCGATGCGATGCATGTGCCCTCTCTATG...GTTTGGGAGAACACGTAACTGTTGAAAAACTACCTGGGAGGAGTGAGTTCCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
CDS-3UTR GCA 90 bp CACATACAGCTCCATAGCAACTCCACAGGCCACCGCTCCAAACCTCCTCTCTTTAGAGTGAGTTTCAGCTaGCATCTCTGCTCTCCCTTT +
Preference number: 4 (lower is better)
Translates to: HIQLHSNSTGHRSKPPLFRVSFS*HLCSPF
Trigger: AAAGGGAGAGCAGAGATGGCAGCTGAAACTCACTCT...AAAGAGAGGAGGTTTGGAGCGGTGGCCTGTGGAGTTGCTATGGAGCTGTATGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648349.2
CDS-3UTR GCA 90 bp GAACCCCATAGGCACAGCATCTTTCAGCAACTTTTGACGCATTGTACTGACTTCAAGGCAGAATGGCACTaGAGGAGACCCTTCCCGGCT +
Preference number: 4 (lower is better)
Translates to: EPHRHSIFQQLLTHCTDFKAEWH*RRPFPA
Trigger: AGCCGGGAAGGGTCTCCTGCAGTGCCATTCTGCCTT...GAAGTCAGTACAATGCGTCAAAAGTTGCTGAAAGATGCTGTGCCTATGGGGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
CDS-3UTR GCA 90 bp GGAGGAACTCACTCCTCCCAGGTAGTTTTTCAACAGTTACGTGTTCTCCCAAACGAGTGGTGTGACCTCTaGCTCACTGTTCAGCTCCCA +
Preference number: 4 (lower is better)
Translates to: GGTHSSQVVFQQLRVLPNEWCDL*LTVQLP
Trigger: TGGGAGCTGAACAGTGAGGCAGAGGTCACACCACTC...GTTTGGGAGAACACGTAACTGTTGAAAAACTACCTGGGAGGAGTGAGTTCCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR GCA 90 bp CAGCTGCTGAATGCCAAGGTACTGTTCTGTACAGGACATTTCACCAAAGCAAATGCCTGGGACACTCAGTaGAGGCAGCCTTGGCCTCAT +
Preference number: 4 (lower is better)
Translates to: QLLNAKVLFCTGHFTKANAWDTQ*RQPWPH
Trigger: ATGAGGCCAAGGCTGCCTGCACTGAGTGTCCCAGGC...ATTTGCTTTGGTGAAATGTCCTGTACAGAACAGTACCTTGGCATTCAGCAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR GCA 90 bp AGCTGGTTGTGGAAAGTGCTAGTATGCAGGTCTGCTCAGGGATCTGTGAGGCTCTGGAAAGTGCTAGTATaGAGGTCTGCTCAGGGATCT +
Preference number: 4 (lower is better)
Translates to: SWLWKVLVCRSAQGSVRLWKVLV*RSAQGS
Trigger: AGATCCCTGAGCAGACCTGCATACTAGCACTTTCCA...GAGCCTCACAGATCCCTGAGCAGACCTGCATACTAGCACTTTCCACAACCAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR GCA 90 bp TTTGCTTTCATTAAAAAGATCTCCACACTGTCACTACGAAAATGTGCAGACAACAGCGGGGCCTGTGCCTaGCTGCCCTCCCGGCTTGGA +
Preference number: 4 (lower is better)
Translates to: FAFIKKISTLSLRKCADNSGACA*LPSRLG
Trigger: TCCAAGCCGGGAGGGCAGGCAGGCACAGGCCCCGCT...GTTGTCTGCACATTTTCGTAGTGACAGTGTGGAGATCTTTTTAATGAAAGCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR GCA 90 bp GCAGTCAGACATGAGTTCCCTTCAGGGAAAATGCACCTTAGTATTTTAACTTTGGTCCCCACCCGGCTCTaGGGACAGACATGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: AVRHEFPSGKMHLSILTLVPTRL*GQTWQR
Trigger: CCTCTGCCATGTCTGTCCGCAGAGCCGGGTGGGGAC...CAAAGTTAAAATACTAAGGTGCATTTTCCCTGAAGGGAACTCATGTCTGACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR GCA 90 bp GAACCCCATAGGCACAGCATCTTTCAGCAACTTTTGACGCATTGTACTGACTTCCTGGCGAATGCGAGCTaGAAAGGGACAGAGGAGGAC +
Preference number: 4 (lower is better)
Translates to: EPHRHSIFQQLLTHCTDFLANAS*KGTEED
Trigger: GTCCTCCTCTGTCCCTTTGCAGCTCGCATTCGCCAG...GAAGTCAGTACAATGCGTCAAAAGTTGCTGAAAGATGCTGTGCCTATGGGGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CCA 90 bp CTTGCAAGTTACCATCTCGCTACCCTGGGCGTCCTCACGACTTCGGACTCCCCCTGCTTATTTTCATCTTaGCCCCCGAATACAAACAAA +
Preference number: 4 (lower is better)
Translates to: LASYHLATLGVLTTSDSPCLFSS*PPNTNK
Trigger: TTTGTTTGTATTCGGGGGCCAAGATGAAAATAAGCA...GGGGGAGTCCGAAGTCGTGAGGACGCCCAGGGTAGCGAGATGGTAACTTGCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000650388.1
CDS-3UTR CCA 90 bp CATCCTGTACGGCGAAGGTCGGATGGAAGGAGTGGTTTAGTGTGGTGCCAGGTTTGCCTCGTTCATAGGTaGCAATGCTGTCCATGTATT +
Preference number: 4 (lower is better)
Translates to: HPVRRRSDGRSGLVWCQVCLVHR*QCCPCI
Trigger: AATACATGGACAGCATTGCCACCTATGAACGAGGCA...AACCTGGCACCACACTAAACCACTCCTTCCATCCGACCTTCGCCGTACAGGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000650388.1
CDS-3UTR CCA 90 bp ATCTCGCTACCCTGGGCGTCCTCACGACTTCGGACTCCCCCAAACACATACAGCTATCGTAACACTCCATaGAAATCAGCTCCTTTTCAC +
Preference number: 4 (lower is better)
Translates to: ISLPWASSRLRTPPNTYSYRNTP*KSAPFH
Trigger: GTGAAAAGGAGCTGATTTCCATGGAGTGTTACGATA...GCTGTATGTGTTTGGGGGAGTCCGAAGTCGTGAGGACGCCCAGGGTAGCGAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000650388.1
CDS-3UTR CCA 90 bp ATCTCGCTACCCTGGGCGTCCTCACGACTTCGGACTCCCCCAAACACATACAGCAAACAAAAGAGGAACTaGCGGGGATGCATAAATTCT +
Preference number: 4 (lower is better)
Translates to: ISLPWASSRLRTPPNTYSKQKRN*RGCINS
Trigger: AGAATTTATGCATCCCCGCCAGTTCCTCTTTTGTTT...GCTGTATGTGTTTGGGGGAGTCCGAAGTCGTGAGGACGCCCAGGGTAGCGAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000650388.1
CDS-3UTR CCA 90 bp GTTACCATCTCGCTACCCTGGGCGTCCTCACGACTTCGGACTCCCCCAAACACAAAACAAAAGAGGAACTaGCGGGGATGCATAAATTCT +
Preference number: 4 (lower is better)
Translates to: VTISLPWASSRLRTPPNTKQKRN*RGCINS
Trigger: AGAATTTATGCATCCCCGCCAGTTCCTCTTTTGTTT...TGTGTTTGGGGGAGTCCGAAGTCGTGAGGACGCCCAGGGTAGCGAGATGGTAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000650388.1
CDS-3UTR CCA 90 bp ACATGCATCGCATCGCTGCTGTGGGTTTCCGTGAAACTCTCTCTTCTCCACCAAAGGAGTGGTTTAGTGTaGTGCCAGGTTCCTGTGCTT +
Preference number: 4 (lower is better)
Translates to: TCIASLLWVSVKLSLLHQRSGLV*CQVPVL
Trigger: AAGCACAGGAACCTGGCACCACACTAAACCACTCCT...TTGGTGGAGAAGAGAGAGTTTCACGGAAACCCACAGCAGCGATGCGATGCATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000650388.1
CDS-3UTR CCA 90 bp GAACCCCATAGGCACAGCATCTTTCAGCAACTTTTGACGCATTGTACTGACTTCACTGTGCGGCACATCTaGCCTGGTGCCTCTGGCATA +
Preference number: 4 (lower is better)
Translates to: EPHRHSIFQQLLTHCTDFTVRHI*PGASGI
Trigger: TATGCCAGAGGCACCAGGCCAGATGTGCCGCACAGT...GAAGTCAGTACAATGCGTCAAAAGTTGCTGAAAGATGCTGTGCCTATGGGGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
CDS-3UTR CCA 90 bp AAGATCTCCCGAGAGGAAGAGTCTTGCCTACAACTGGTGAGCCTCCTCATCTTCGCAGACGTGAGAATGTaGAAAGCTATAAGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: KISREEESCLQLVSLLIFADVRM*KAIRPG
Trigger: CCCAGGCCTTATAGCTTTCCACATTCTCACGTCTGC...GAAGATGAGGAGGCTCACCAGTTGTAGGCAAGACTCTTCCTCTCGGGAGATCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CCA 90 bp GAACCCCATAGGCACAGCATCTTTCAGCAACTTTTGACGCATTGTACTGACTTCTACCCACCTACGGAGTaGGAAGGTTGCCGTGCCAAC +
Preference number: 4 (lower is better)
Translates to: EPHRHSIFQQLLTHCTDFYPPTE*EGCRAN
Trigger: GTTGGCACGGCAACCTTCCCACTCCGTAGGTGGGTA...GAAGTCAGTACAATGCGTCAAAAGTTGCTGAAAGATGCTGTGCCTATGGGGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CCA 90 bp AGATCTCCACACTGTCACTACGAAAATGTGCAGACAACAGCTGACTGGTACACAAACCTCCCGAGTAGCTaGGATTACAGGGGCCCACCA +
Preference number: 4 (lower is better)
Translates to: RSPHCHYENVQTTADWYTNLPSS*DYRGPP
Trigger: TGGTGGGCCCCTGTAATCCCAGCTACTCGGGAGGTT...TGTGTACCAGTCAGCTGTTGTCTGCACATTTTCGTAGTGACAGTGTGGAGATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CCA 90 bp ACAGTTCCTAGTGGGTGCTCATCAGACATGTGTTGGCTGACCCAAGGCGGGTTTCTAGCTCTGAAGACATaGTGTGCATCCCAGCCTATA +
Preference number: 4 (lower is better)
Translates to: TVPSGCSSDMCWLTQGGFLALKT*CASQPI
Trigger: TATAGGCTGGGATGCACACCATGTCTTCAGAGCTAG...AAACCCGCCTTGGGTCAGCCAACACATGTCTGATGAGCACCCACTAGGAACTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CCA 90 bp AAGATCTCCCGAGAGGAAGAGTCTTGCCTACAACTGGTGAGCCTCCTCATCTTCGTGAGGCTCATGCTCTaGCCATTATGTGGTCTGAAG +
Preference number: 4 (lower is better)
Translates to: KISREEESCLQLVSLLIFVRLML*PLCGLK
Trigger: CTTCAGACCACATAATGGCCAGAGCATGAGCCTCAC...GAAGATGAGGAGGCTCACCAGTTGTAGGCAAGACTCTTCCTCTCGGGAGATCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR TCA 90 bp CATAATTTGTCTAAAACTCTCACTAGTGAATGCCACTGGGAAACTTCTATTACACGGCTCTCCGCGCTCTaGGCAGAAGCTGGAGCCCCC +
Preference number: 4 (lower is better)
Translates to: HNLSKTLTSECHWETSITRLSAL*AEAGAP
Trigger: GGGGGCTCCAGCTTCTGCTCAGAGCGCGGAGAGCCG...TGTAATAGAAGTTTCCCAGTGGCATTCACTAGTGAGAGTTTTAGACAAATTATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
CDS-3UTR TCA 90 bp TTTTTCAACAGTTACGTGTTCTCCCAAACAAGAGCTAAAGCTCAAGTTTGTAAGAGACGCGCGGCGTGCTaGGGGTCAGACACGGCACTG +
Preference number: 4 (lower is better)
Translates to: FFNSYVFSQTRAKAQVCKRRAAC*GSDTAL
Trigger: CAGTGCCGTGTCTGACCCTCAGCACGCCGCGCGTCT...CTTACAAACTTGAGCTTTAGCTCTTGTTTGGGAGAACACGTAACTGTTGAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
CDS-3UTR TCA 90 bp TTTGCTTTCATTAAAAAGATCTCCACACTGTCACTACGAAAATGTGCAGACAACCCTCGCGGAAAGAGCTaGGCGCTCGCAGCAGACGCG +
Preference number: 4 (lower is better)
Translates to: FAFIKKISTLSLRKCADNPRGKS*ALAADA
Trigger: CGCGTCTGCTGCGAGCGCTCAGCTCTTTCCGCGAGG...GTTGTCTGCACATTTTCGTAGTGACAGTGTGGAGATCTTTTTAATGAAAGCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
CDS-3UTR TCA 90 bp ACATGCATCGCATCGCTGCTGTGGGTTTCCGTGAAACTCTCTCTTCTCCACCAAAGCAGCCGATCTTTCTaGCCATGGTCAAATCAGGTT +
Preference number: 4 (lower is better)
Translates to: TCIASLLWVSVKLSLLHQSSRSF*PWSNQV
Trigger: AACCTGATTTGACCATGGTCAGAAAGATCGGCTGCT...TTGGTGGAGAAGAGAGAGTTTCACGGAAACCCACAGCAGCGATGCGATGCATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000650388.1
CDS-3UTR TCA 90 bp GCTGCAGGCGGAAAAGCTTGCAATTCGCAATGCGTAAGGCTGCACATCCTGTACTACAGCAGTCAGACATaGGTTCCCTTCAGGGAAAAT +
Preference number: 4 (lower is better)
Translates to: AAGGKACNSQCVRLHILYYSSQT*VPFREN
Trigger: ATTTTCCCTGAAGGGAACTCATGTCTGACTGCTGTA...GTACAGGATGTGCAGCCTTACGCATTGCGAATTGCAAGCTTTTCCGCCTGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648349.2
CDS-3UTR TCA 90 bp GAACCCCATAGGCACAGCATCTTTCAGCAACTTTTGACGCATTGTACTGACTTCCAGACATGTGTTGGCTaGCCCAAGGCGGGTTTTGCT +
Preference number: 4 (lower is better)
Translates to: EPHRHSIFQQLLTHCTDFQTCVG*PKAGFA
Trigger: AGCAAAACCCGCCTTGGGTCAGCCAACACATGTCTG...GAAGTCAGTACAATGCGTCAAAAGTTGCTGAAAGATGCTGTGCCTATGGGGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR TCA 90 bp CAGCTGCTGAATGCCAAGGTACTGTTCTGTACAGGACATTTCACCAAAGCAAATCCTCCTGGGGTCAAGTaGTTCTCCTCCCTCAACCTC +
Preference number: 4 (lower is better)
Translates to: QLLNAKVLFCTGHFTKANPPGVK*FSSLNL
Trigger: GAGGTTGAGGGAGGAGAATCACTTGACCCCAGGAGG...ATTTGCTTTGGTGAAATGTCCTGTACAGAACAGTACCTTGGCATTCAGCAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR TCA 90 bp CAGCTGCTGAATGCCAAGGTACTGTTCTGTACAGGACATTTCACCAAAGCAAATCTGCTCAGGGATCTGTaGGGCTCATGCTCTGGCCAT +
Preference number: 4 (lower is better)
Translates to: QLLNAKVLFCTGHFTKANLLRDL*GSCSGH
Trigger: ATGGCCAGAGCATGAGCCTCACAGATCCCTGAGCAG...ATTTGCTTTGGTGAAATGTCCTGTACAGAACAGTACCTTGGCATTCAGCAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR TCA 90 bp TTTGCTTTCATTAAAAAGATCTCCACACTGTCACTACGAAAATGTGCAGACAACGGCTGCACTGGGTGCTaGGGTAGTGAGCGGGGCCTG +
Preference number: 4 (lower is better)
Translates to: FAFIKKISTLSLRKCADNGCTGC*GSERGL
Trigger: CAGGCCCCGCTCACTACCTCAGCACCCAGTGCAGCC...GTTGTCTGCACATTTTCGTAGTGACAGTGTGGAGATCTTTTTAATGAAAGCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR TCA 90 bp ACAGTCCAATCTAACATTTTAGGCACAAACCTTAATTTGTTGGGCAGGGTTAGGACGTCGCCGGCGAACTaGAGGGGTACAAGACCGAGG +
Preference number: 4 (lower is better)
Translates to: TVQSNILGTNLNLLGRVRTSPAN*RGTRPR
Trigger: CCTCGGTCTTGTACCCCTTCAGTTCGCCGGCGACGT...CCTAACCCTGCCCAACAAATTAAGGTTTGTGCCTAAAATGTTAGATTGGACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR GCA 90 bp CATAGAGAGGGCACATGCATCGCATCGCTGCTGTGGGTTTCCGTGAAACTCTCTTCCGAAGTTATGTCTTaGCTCGTTCATAGGTGGCAA +
Preference number: 4 (lower is better)
Translates to: HREGTCIASLLWVSVKLSSEVMS*LVHRWQ
Trigger: TTGCCACCTATGAACGAGGCAAGACATAACTTCGGA...AGAGAGTTTCACGGAAACCCACAGCAGCGATGCGATGCATGTGCCCTCTCTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000650388.1
CDS-3UTR GCA 90 bp ACTTCTTTACTTCTTAAGCTGATGATACCCTTTTGCCCGCCCCATGTACCAGATCTTCCTGGACTCCAGTaGTCAGTGAGCAGCCAGTGG +
Preference number: 4 (lower is better)
Translates to: TSLLLKLMIPFCPPHVPDLPGLQ*SVSSQW
Trigger: CCACTGGCTGCTCACTGAGCACTGGAGTCCAGGAAG...ATCTGGTACATGGGGCGGGCAAAAGGGTATCATCAGCTTAAGAAGTAAAGAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR GCA 90 bp CCCCATAGGCACAGCATCTTTCAGCAACTTTTGACGCATTGTACTGACTTCCAGAGGCACTCTCCCAGCTaGTTACAGTCATCACCCAGT +
Preference number: 4 (lower is better)
Translates to: PHRHSIFQQLLTHCTDFQRHSPS*LQSSPS
Trigger: ACTGGGTGATGACTGTAAGCAGCTGGGAGAGTGCCT...CTGGAAGTCAGTACAATGCGTCAAAAGTTGCTGAAAGATGCTGTGCCTATGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR GCA 90 bp CTCTCCCTTTCGGAGCTATGTTATGGTGCTCTTGGGTCAGGATCTCGCACTCTGACAACCCGCCCCAACTaGACCTTTCTTTTCCTTTTT +
Preference number: 4 (lower is better)
Translates to: LSLSELCYGALGSGSRTLTTRPN*TFLFLF
Trigger: AAAAAGGAAAAGAAAGGTGCAGTTGGGGCGGGTTGT...CAGAGTGCGAGATCCTGACCCAAGAGCACCATAACATAGCTCCGAAAGGGAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CCA 90 bp ATGGTTCATTCAGCATCTGTTCCCGTAAATAACTGGAGTCCAACCCTGAAACCCTCCCCTTGCTGCGGCTaGCTGAGCGGTATATTGCTA +
Preference number: 4 (lower is better)
Translates to: MVHSASVPVNNWSPTLKPSPCCG*LSGILL
Trigger: TAGCAATATACCGCTCAGCCAGCCGCAGCAAGGGGA...GGGTTTCAGGGTTGGACTCCAGTTATTTACGGGAACAGATGCTGAATGAACCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000650388.1
CDS-3UTR CCA 90 bp CTCTCCCTTTCGGAGCTATGTTATGGTGCTCTTGGGTCAGGATCTCGCACTCTGTGCCTCGTTCATAGGTaGCAATGCTGTCCATGTATT +
Preference number: 4 (lower is better)
Translates to: LSLSELCYGALGSGSRTLCLVHR*QCCPCI
Trigger: AATACATGGACAGCATTGCCACCTATGAACGAGGCA...CAGAGTGCGAGATCCTGACCCAAGAGCACCATAACATAGCTCCGAAAGGGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
CDS-3UTR CCA 90 bp ATGGTAGAACTCGGACTTGCAAGTTACCATCTCGCTACCCTGGGCGTCCTCACGGCACGTAGTCGTAATTaGTACCTGTATCAAGATCTC +
Preference number: 4 (lower is better)
Translates to: MVELGLASYHLATLGVLTARSRN*YLYQDL
Trigger: GAGATCTTGATACAGGTACCAATTACGACTACGTGC...CGTGAGGACGCCCAGGGTAGCGAGATGGTAACTTGCAAGTCCGAGTTCTACCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000650388.1
CDS-3UTR CCA 90 bp CAGTTCGATCCAAAGCTGCCTGTTAGGGTCATAGAGAGGGCACATGCATCGCATACAGCCACATTTAACTaGAGGAACTCACTCCTCCCA +
Preference number: 4 (lower is better)
Translates to: QFDPKLPVRVIERAHASHTATFN*RNSLLP
Trigger: TGGGAGGAGTGAGTTCCTCCAGTTAAATGTGGCTGT...ATGCGATGCATGTGCCCTCTCTATGACCCTAACAGGCAGCTTTGGATCGAACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648349.2
CDS-3UTR CCA 90 bp GGAGGAACTCACTCCTCCCAGGTAGTTTTTCAACAGTTACGTGTTCTCCCAAACGAAAGCTATAAGGCCTaGGACACTCAGTGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: GGTHSSQVVFQQLRVLPNESYKA*DTQCRQ
Trigger: CTGCCTGCACTGAGTGTCCCAGGCCTTATAGCTTTC...GTTTGGGAGAACACGTAACTGTTGAAAAACTACCTGGGAGGAGTGAGTTCCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR CAA 72 bp GGCTGCTGGTACACACCCCAACAGTGGCTGCAAAGATaGTTCAAAACTTCTGCTGAGGCCACAATGATTACG +
Preference number: 4 (lower is better)
Translates to: GCWYTPQQWLQR*FKTSAEATMIT
Trigger: CGTAATCATTGTGGCCTCAGCAGAAGTTTTGAACAATCTTTGCAGCCACTGTTGGGGTGTGTACCAGCAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR CAA 72 bp ATCGCCTCCCCTTGCTGCGGCTGGCTGAGCGGTATATaGCTACACTCTTTGACAATTTCTCGTACTAATGGT +
Preference number: 4 (lower is better)
Translates to: IASPCCGWLSGI*LHSLTISRTNG
Trigger: ACCATTAGTACGAGAAATTGTCAAAGAGTGTAGCAATATACCGCTCAGCCAGCCGCAGCAAGGGGAGGCGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000650388.1
CDS-3UTR TCA 90 bp AGATCTCCACACTGTCACTACGAAAATGTGCAGACAACAGCTGACTGGTACACACCACGGGAGGCCTCTTaGATCATGAACGCCAACATT +
Preference number: 4 (lower is better)
Translates to: RSPHCHYENVQTTADWYTPREAS*IMNANI
Trigger: AATGTTGGCGTTCATGATTCAAGAGGCCTCCCGTGG...TGTGTACCAGTCAGCTGTTGTCTGCACATTTTCGTAGTGACAGTGTGGAGATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR TCA 90 bp AGCTGGTTGTGGAAAGTGCTAGTATGCAGGTCTGCTCAGGGATCTGTGAGGCTCCATTATAAGCTGTGCTaGGTCTATAGAGGGTCTCAT +
Preference number: 4 (lower is better)
Translates to: SWLWKVLVCRSAQGSVRLHYKLC*VYRGSH
Trigger: ATGAGACCCTCTATAGACTCAGCACAGCTTATAATG...GAGCCTCACAGATCCCTGAGCAGACCTGCATACTAGCACTTTCCACAACCAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR TCA 90 bp TTTGCTTTCATTAAAAAGATCTCCACACTGTCACTACGAAAATGTGCAGACAACGGCAGGCGGATTGCCTaGGCTCAGGAGCTCGAGACC +
Preference number: 4 (lower is better)
Translates to: FAFIKKISTLSLRKCADNGRRIA*AQELET
Trigger: GGTCTCGAGCTCCTGAGCTCAGGCAATCCGCCTGCC...GTTGTCTGCACATTTTCGTAGTGACAGTGTGGAGATCTTTTTAATGAAAGCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR TCA 90 bp AGCTGGTTGTGGAAAGTGCTAGTATGCAGGTCTGCTCAGGGATCTGTGAGGCTCATTTCTAGTGTGTCATaGATGGGTCTCACTCACAGA +
Preference number: 4 (lower is better)
Translates to: SWLWKVLVCRSAQGSVRLISSVS*MGLTHR
Trigger: TCTGTGAGTGAGACCCATTCATGACACACTAGAAAT...GAGCCTCACAGATCCCTGAGCAGACCTGCATACTAGCACTTTCCACAACCAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR GCA 90 bp TTGCAATTCGCAATGCGTAAGGCTGCACATCCTGTACGGCGAAGGTCGGATGGAGTTCATAGGTGGCAATaGTGTCCATGTATTTGCATC +
Preference number: 4 (lower is better)
Translates to: LQFAMRKAAHPVRRRSDGVHRWQ*CPCICI
Trigger: GATGCAAATACATGGACAGCATTGCCACCTATGAAC...TCCATCCGACCTTCGCCGTACAGGATGTGCAGCCTTACGCATTGCGAATTGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000650388.1
CDS-3UTR GCA 90 bp CCCCATAGGCACAGCATCTTTCAGCAACTTTTGACGCATTGTACTGACTTCCAGGCAGGCGGAAAAGCTTaGAATTCGCAATGCGTAAGG +
Preference number: 4 (lower is better)
Translates to: PHRHSIFQQLLTHCTDFQAGGKA*NSQCVR
Trigger: CCTTACGCATTGCGAATTGCAAGCTTTTCCGCCTGC...CTGGAAGTCAGTACAATGCGTCAAAAGTTGCTGAAAGATGCTGTGCCTATGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
CDS-3UTR GCA 90 bp AAAGCTTGCAATTCGCAATGCGTAAGGCTGCACATCCTGTACGGCGAAGGTCGGAGTTCACATGAGGGCTaGAACCTGACTCATCAATTT +
Preference number: 4 (lower is better)
Translates to: KACNSQCVRLHILYGEGRSSHEG*NLTHQF
Trigger: AAATTGATGAGTCAGGTTGCAGCCCTCATGTGAACT...CCGACCTTCGCCGTACAGGATGTGCAGCCTTACGCATTGCGAATTGCAAGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648349.2
CDS-3UTR GCA 90 bp GTTACCATCTCGCTACCCTGGGCGTCCTCACGACTTCGGACTCCCCCAAACACAAATAAGACAAAATGCTaGTTCTTACAGCCATATTCC +
Preference number: 4 (lower is better)
Translates to: VTISLPWASSRLRTPPNTNKTKC*FLQPYS
Trigger: GGAATATGGCTGTAAGAAGCAGCATTTTGTCTTATT...TGTGTTTGGGGGAGTCCGAAGTCGTGAGGACGCCCAGGGTAGCGAGATGGTAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648349.2
CDS-3UTR GCA 90 bp CCCCATAGGCACAGCATCTTTCAGCAACTTTTGACGCATTGTACTGACTTCCAGTCTGGAAGGGGATACTaGGGTGTTTCTAGCACTCCT +
Preference number: 4 (lower is better)
Translates to: PHRHSIFQQLLTHCTDFQSGRGY*GVSSTP
Trigger: AGGAGTGCTAGAAACACCGCAGTATCCCCTTCCAGA...CTGGAAGTCAGTACAATGCGTCAAAAGTTGCTGAAAGATGCTGTGCCTATGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR GCA 90 bp GAACCCCATAGGCACAGCATCTTTCAGCAACTTTTGACGCATTGTACTGACTTCCGAGAGGAAGAGTCTTaGCTACAACTGGTGAGCCTC +
Preference number: 4 (lower is better)
Translates to: EPHRHSIFQQLLTHCTDFREEES*LQLVSL
Trigger: GAGGCTCACCAGTTGTAGGCAAGACTCTTCCTCTCG...GAAGTCAGTACAATGCGTCAAAAGTTGCTGAAAGATGCTGTGCCTATGGGGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR GCA 90 bp ACTTCTTTACTTCTTAAGCTGATGATACCCTTTTGCCCGCCCCATGTACCAGATAGGCTGGTCTCAAACTaGCGACCTCAGGTGATCTGC +
Preference number: 4 (lower is better)
Translates to: TSLLLKLMIPFCPPHVPDRLVSN*RPQVIC
Trigger: GCAGATCACCTGAGGTCGGCAGTTTGAGACCAGCCT...ATCTGGTACATGGGGCGGGCAAAAGGGTATCATCAGCTTAAGAAGTAAAGAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR GCA 90 bp CTCTCCCTTTCGGAGCTATGTTATGGTGCTCTTGGGTCAGGATCTCGCACTCTGTCTGAAGACATGGTGTaGATCCCAGCCTATAAATCT +
Preference number: 4 (lower is better)
Translates to: LSLSELCYGALGSGSRTLSEDMV*IPAYKS
Trigger: AGATTTATAGGCTGGGATGCACACCATGTCTTCAGA...CAGAGTGCGAGATCCTGACCCAAGAGCACCATAACATAGCTCCGAAAGGGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR GCA 90 bp ACTTCTTTACTTCTTAAGCTGATGATACCCTTTTGCCCGCCCCATGTACCAGATTGGTCACTTCCAGGCTaGTGGTACACACCCCAACAG +
Preference number: 4 (lower is better)
Translates to: TSLLLKLMIPFCPPHVPDWSLPG*WYTPQQ
Trigger: CTGTTGGGGTGTGTACCAGCAGCCTGGAAGTGACCA...ATCTGGTACATGGGGCGGGCAAAAGGGTATCATCAGCTTAAGAAGTAAAGAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CCA 90 bp CCCCATAGGCACAGCATCTTTCAGCAACTTTTGACGCATTGTACTGACTTCCAGAGGAGTGGTTTAGTGTaGTGCCAGGTTCCTGTGCTT +
Preference number: 4 (lower is better)
Translates to: PHRHSIFQQLLTHCTDFQRSGLV*CQVPVL
Trigger: AAGCACAGGAACCTGGCACCACACTAAACCACTCCT...CTGGAAGTCAGTACAATGCGTCAAAAGTTGCTGAAAGATGCTGTGCCTATGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
CDS-3UTR CCA 90 bp GGAGGAACTCACTCCTCCCAGGTAGTTTTTCAACAGTTACGTGTTCTCCCAAACTCATCAGACATGTGTTaGCTGACCCAAGGCGGGTTT +
Preference number: 4 (lower is better)
Translates to: GGTHSSQVVFQQLRVLPNSSDMC*LTQGGF
Trigger: AAACCCGCCTTGGGTCAGCCAACACATGTCTGATGA...GTTTGGGAGAACACGTAACTGTTGAAAAACTACCTGGGAGGAGTGAGTTCCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CCA 90 bp ACTTCTTTACTTCTTAAGCTGATGATACCCTTTTGCCCGCCCCATGTACCAGATGAGCAGAGGGCAGGGTaGGAAAGCTATCCCAAGAAG +
Preference number: 4 (lower is better)
Translates to: TSLLLKLMIPFCPPHVPDEQRAG*ESYPKK
Trigger: CTTCTTGGGATAGCTTTCCCACCCTGCCCTCTGCTC...ATCTGGTACATGGGGCGGGCAAAAGGGTATCATCAGCTTAAGAAGTAAAGAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CCA 90 bp AGATCTCCACACTGTCACTACGAAAATGTGCAGACAACAGCTGACTGGTACACAGTCCAAGTTCTGACCTaGAGCCTTGGGGACAGATCT +
Preference number: 4 (lower is better)
Translates to: RSPHCHYENVQTTADWYTVQVLT*SLGDRS
Trigger: AGATCTGTCCCCAAGGCTCCAGGTCAGAACTTGGAC...TGTGTACCAGTCAGCTGTTGTCTGCACATTTTCGTAGTGACAGTGTGGAGATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CCA 90 bp AAGGTTGCCGTGCCAACCTCCCCTAGGGCAGGAGAAACAACTGGCATATGTTCAGTTAAAAACCAGTCTTaGACAAGGGTGACAGTCACA +
Preference number: 4 (lower is better)
Translates to: KVAVPTSPRAGETTGICSVKNQS*TRVTVT
Trigger: TGTGACTGTCACCCTTGTCCAAGACTGGTTTTTAAC...TGAACATATGCCAGTTGTTTCTCCTGCCCTAGGGGAGGTTGGCACGGCAACCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR CAA 72 bp TTAACCAAAGGTCTTCATCTGACCACGGGAGGCCTCTaGAATCATGAACGCCAACATTCTGGAAGGGGATAC +
Preference number: 4 (lower is better)
Translates to: LTKGLHLTTGGL*NHERQHSGRGY
Trigger: GTATCCCCTTCCAGAATGTTGGCGTTCATGATTCAAGAGGCCTCCCGTGGTCAGATGAAGACCTTTGGTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR TCA 90 bp CCCCATAGGCACAGCATCTTTCAGCAACTTTTGACGCATTGTACTGACTTCCAGAGCAGGTCAGCTGCCTaGACAACATCTTGGATTGTA +
Preference number: 4 (lower is better)
Translates to: PHRHSIFQQLLTHCTDFQSRSAA*TTSWIV
Trigger: TACAATCCAAGATGTTGTTCAGGCAGCTGACCTGCT...CTGGAAGTCAGTACAATGCGTCAAAAGTTGCTGAAAGATGCTGTGCCTATGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
CDS-3UTR TCA 90 bp TTGCAATTCGCAATGCGTAAGGCTGCACATCCTGTACGGCGAAGGTCGGATGGACAAAAATCCTTCTGCTaGGAGAACTCCATGGTTAAT +
Preference number: 4 (lower is better)
Translates to: LQFAMRKAAHPVRRRSDGQKSFC*ENSMVN
Trigger: ATTAACCATGGAGTTCTCTCAGCAGAAGGATTTTTG...TCCATCCGACCTTCGCCGTACAGGATGTGCAGCCTTACGCATTGCGAATTGCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000650388.1
CDS-3UTR TCA 90 bp ACAGTCCAATCTAACATTTTAGGCACAAACCTTAATTTGTTGGGCAGGGTTAGGGACTCCAGTGCTCAGTaGGCAGCCAGTGGAAAAGGG +
Preference number: 4 (lower is better)
Translates to: TVQSNILGTNLNLLGRVRDSSAQ*AASGKG
Trigger: CCCTTTTCCACTGGCTGCTCACTGAGCACTGGAGTC...CCTAACCCTGCCCAACAAATTAAGGTTTGTGCCTAAAATGTTAGATTGGACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR TCA 90 bp AGATCTCCACACTGTCACTACGAAAATGTGCAGACAACAGCTGACTGGTACACAAACTGCCAGCAGGCATaGCAGACACTCAATCCAAGT +
Preference number: 4 (lower is better)
Translates to: RSPHCHYENVQTTADWYTNCQQA*QTLNPS
Trigger: ACTTGGATTGAGTGTCTGTCATGCCTGCTGGCAGTT...TGTGTACCAGTCAGCTGTTGTCTGCACATTTTCGTAGTGACAGTGTGGAGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR TCA 90 bp ACTTCTTTACTTCTTAAGCTGATGATACCCTTTTGCCCGCCCCATGTACCAGATATTCCTCAAGGCCTCTaGCTGCCTGCTTCCAAGCTT +
Preference number: 4 (lower is better)
Translates to: TSLLLKLMIPFCPPHVPDIPQGL*LPASKL
Trigger: AAGCTTGGAAGCAGGCAGTCAGAGGCCTTGAGGAAT...ATCTGGTACATGGGGCGGGCAAAAGGGTATCATCAGCTTAAGAAGTAAAGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR TCA 90 bp ACAGTCCAATCTAACATTTTAGGCACAAACCTTAATTTGTTGGGCAGGGTTAGGGGTGACCAGGCAAGCTaGCAGACACTAGGGAGGATG +
Preference number: 4 (lower is better)
Translates to: TVQSNILGTNLNLLGRVRGDQAS*QTLGRM
Trigger: CATCCTCCCTAGTGTCTGTCAGCTTGCCTGGTCACC...CCTAACCCTGCCCAACAAATTAAGGTTTGTGCCTAAAATGTTAGATTGGACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR TCA 90 bp CAAGTGCAGTGGAAAAGCAGTCTTGGCATGTTTGGATATGTTGATTTGCATATACCTGGGTCCAAGTTCTaGCCTGGAGCCTTGGGGACA +
Preference number: 4 (lower is better)
Translates to: QVQWKSSLGMFGYVDLHIPGSKF*PGALGT
Trigger: TGTCCCCAAGGCTCCAGGTCAGAACTTGGACCCAGG...TATATGCAAATCAACATATCCAAACATGCCAAGACTGCTTTTCCACTGCACTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR GCA 90 bp ATAGATCCACCTTTTAAACTCATCATGGTAGAACTCGGACTTGCAAGTTACCATATCGCCTCCCCTTGCTaGGGCTGGCTGAGCGGTATA +
Preference number: 4 (lower is better)
Translates to: IDPPFKLIMVELGLASYHIASPC*GWLSGI
Trigger: TATACCGCTCAGCCAGCCGCAGCAAGGGGAGGCGAT...ATGGTAACTTGCAAGTCCGAGTTCTACCATGATGAGTTTAAAAGGTGGATCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000650388.1
CDS-3UTR GCA 90 bp GCAGTCAGACATGAGTTCCCTTCAGGGAAAATGCACCTTAGTATTTTAACTTTGCACCAACAGTCACGATaGACTCAGAGTAGCCCCGGG +
Preference number: 4 (lower is better)
Translates to: AVRHEFPSGKMHLSILTLHQQSR*TQSSPG
Trigger: CCCGGGGCTACTCTGAGTGCATCGTGACTGTTGGTG...CAAAGTTAAAATACTAAGGTGCATTTTCCCTGAAGGGAACTCATGTCTGACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
CDS-3UTR GCA 90 bp GACTCCCCCAAACACATACAGCTCCATAGCAACTCCACAGGCCACCGCTCCAAATTTCTTTTTCATAGCTaGATAGCAGCCGATCTTTCT +
Preference number: 4 (lower is better)
Translates to: DSPKHIQLHSNSTGHRSKFLFHS*IAADLS
Trigger: AGAAAGATCGGCTGCTATGCAGCTATGAAAAAGAAA...TTTGGAGCGGTGGCCTGTGGAGTTGCTATGGAGCTGTATGTGTTTGGGGGAGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000650388.1
CDS-3UTR GCA 90 bp AGATCTCCACACTGTCACTACGAAAATGTGCAGACAACAGCTGACTGGTACACATTCAGCTGCCATCTCTaGTCTCCCTTTCGGAGCTAT +
Preference number: 4 (lower is better)
Translates to: RSPHCHYENVQTTADWYTFSCHL*SPFRSY
Trigger: ATAGCTCCGAAAGGGAGAGCAGAGATGGCAGCTGAA...TGTGTACCAGTCAGCTGTTGTCTGCACATTTTCGTAGTGACAGTGTGGAGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
CDS-3UTR GCA 90 bp TTGCAATTCGCAATGCGTAAGGCTGCACATCCTGTACGGCGAAGGTCGGATGGAACTCTCACTAGTGAATaGCACTGGGAAACTTCTATT +
Preference number: 4 (lower is better)
Translates to: LQFAMRKAAHPVRRRSDGTLTSE*HWETSI
Trigger: AATAGAAGTTTCCCAGTGGCATTCACTAGTGAGAGT...TCCATCCGACCTTCGCCGTACAGGATGTGCAGCCTTACGCATTGCGAATTGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648349.2
CDS-3UTR GCA 90 bp GCAGTCAGACATGAGTTCCCTTCAGGGAAAATGCACCTTAGTATTTTAACTTTGGCTGGCAGAGAAAGATaGGCCGACTGCGAAGTGCCT +
Preference number: 4 (lower is better)
Translates to: AVRHEFPSGKMHLSILTLAGRER*ADCEVP
Trigger: AGGCACTTCGCAGTCGGCGCATCTTTCTCTGCCAGC...CAAAGTTAAAATACTAAGGTGCATTTTCCCTGAAGGGAACTCATGTCTGACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR GCA 90 bp CAGCTGCTGAATGCCAAGGTACTGTTCTGTACAGGACATTTCACCAAAGCAAATGCTAGTATGCAGGTCTaGTCAGGGATCTGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: QLLNAKVLFCTGHFTKANASMQV*SGICEA
Trigger: AGCCTCACAGATCCCTGAGCAGACCTGCATACTAGC...ATTTGCTTTGGTGAAATGTCCTGTACAGAACAGTACCTTGGCATTCAGCAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR GCA 90 bp ACAGTCCAATCTAACATTTTAGGCACAAACCTTAATTTGTTGGGCAGGGTTAGGGAAGGAAACAAGGGCTaGGCTCCGCTCTGGCGAATG +
Preference number: 4 (lower is better)
Translates to: TVQSNILGTNLNLLGRVREGNKG*APLWRM
Trigger: CATTCGCCAGAGCGGAGCGCAGCCCTTGTTTCCTTC...CCTAACCCTGCCCAACAAATTAAGGTTTGTGCCTAAAATGTTAGATTGGACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CCA 90 bp TTTAATCCTGCTGAAGAAGAGAAACGCGAACACCAAGTAAAACTTACTATAAACGCTCTGAGCAGAAGCTaGAGCCCCCGGGACGTGCCT +
Preference number: 4 (lower is better)
Translates to: FNPAEEEKREHQVKLTINALSRS*SPRDVP
Trigger: AGGCACGTCCCGGGGGCTCCAGCTTCTGCTCAGAGC...GTTTATAGTAAGTTTTACTTGGTGTTCGCGTTTCTCTTCTTCAGCAGGATTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CCA 90 bp AAGATCTCCCGAGAGGAAGAGTCTTGCCTACAACTGGTGAGCCTCCTCATCTTCTCTCCAGGTATTCTGTaGCAAGGTAATGAACGTGAT +
Preference number: 4 (lower is better)
Translates to: KISREEESCLQLVSLLIFSPGIL*QGNERD
Trigger: ATCACGTTCATTACCTTGCCACAGAATACCTGGAGA...GAAGATGAGGAGGCTCACCAGTTGTAGGCAAGACTCTTCCTCTCGGGAGATCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CCA 90 bp ATGGTTCATTCAGCATCTGTTCCCGTAAATAACTGGAGTCCAACCCTGAAACCCATCGCATCGCTGCTGTaGGTTTCCGTGAAACTCTCT +
Preference number: 4 (lower is better)
Translates to: MVHSASVPVNNWSPTLKPIASLL*VSVKLS
Trigger: AGAGAGTTTCACGGAAACCCACAGCAGCGATGCGAT...GGGTTTCAGGGTTGGACTCCAGTTATTTACGGGAACAGATGCTGAATGAACCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000650388.1
CDS-3UTR CCA 90 bp ATAAGCCTTGCTGAAGCTGCAGGCGGAAAAGCTTGCAATTCGCAATGCGTAAGGGCTGAGAGAACTCCATaGTTAATTCTCGGCATGCTT +
Preference number: 4 (lower is better)
Translates to: ISLAEAAGGKACNSQCVRAERTP*LILGML
Trigger: AAGCATGCCGAGAATTAACCATGGAGTTCTCTCAGC...CCTTACGCATTGCGAATTGCAAGCTTTTCCGCCTGCAGCTTCAGCAAGGCTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000650388.1
CDS-3UTR CCA 90 bp AGCTGGTTGTGGAAAGTGCTAGTATGCAGGTCTGCTCAGGGATCTGTGAGGCTCTATCGTAACACTCCATaGAAATCAGCTCCTTTTCAC +
Preference number: 4 (lower is better)
Translates to: SWLWKVLVCRSAQGSVRLYRNTP*KSAPFH
Trigger: GTGAAAAGGAGCTGATTTCCATGGAGTGTTACGATA...GAGCCTCACAGATCCCTGAGCAGACCTGCATACTAGCACTTTCCACAACCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CCA 90 bp CACATACAGCTCCATAGCAACTCCACAGGCCACCGCTCCAAACCTCCTCTCTTTTATCGTAACACTCCATaGAAATCAGCTCCTTTTCAC +
Preference number: 4 (lower is better)
Translates to: HIQLHSNSTGHRSKPPLFYRNTP*KSAPFH
Trigger: GTGAAAAGGAGCTGATTTCCATGGAGTGTTACGATA...AAAGAGAGGAGGTTTGGAGCGGTGGCCTGTGGAGTTGCTATGGAGCTGTATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000650388.1
CDS-3UTR CCA 90 bp GAACCCCATAGGCACAGCATCTTTCAGCAACTTTTGACGCATTGTACTGACTTCTCCACTGCTGGGTCCTaGGATCATAACACTCTACAG +
Preference number: 4 (lower is better)
Translates to: EPHRHSIFQQLLTHCTDFSTAGS*DHNTLQ
Trigger: CTGTAGAGTGTTATGATCCCAGGACCCAGCAGTGGA...GAAGTCAGTACAATGCGTCAAAAGTTGCTGAAAGATGCTGTGCCTATGGGGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
CDS-3UTR CCA 90 bp AGATCTCCACACTGTCACTACGAAAATGTGCAGACAACAGCTGACTGGTACACACTTTTAGTGGACATATaGCAGTCCACTGCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: RSPHCHYENVQTTADWYTLLVDI*QSTAGS
Trigger: GGACCCAGCAGTGGACTGCCATATGTCCACTAAAAG...TGTGTACCAGTCAGCTGTTGTCTGCACATTTTCGTAGTGACAGTGTGGAGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
CDS-3UTR CCA 90 bp AAGATCTCCCGAGAGGAAGAGTCTTGCCTACAACTGGTGAGCCTCCTCATCTTCGCACGTAGTCGTAATTaGTACCTGTATCAAGATCTC +
Preference number: 4 (lower is better)
Translates to: KISREEESCLQLVSLLIFARSRN*YLYQDL
Trigger: GAGATCTTGATACAGGTACCAATTACGACTACGTGC...GAAGATGAGGAGGCTCACCAGTTGTAGGCAAGACTCTTCCTCTCGGGAGATCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CCA 90 bp GGAGGAACTCACTCCTCCCAGGTAGTTTTTCAACAGTTACGTGTTCTCCCAAACATGTTATGGTGCTCTTaGGTCAGGATCTCGCACTCT +
Preference number: 4 (lower is better)
Translates to: GGTHSSQVVFQQLRVLPNMLWCS*VRISHS
Trigger: AGAGTGCGAGATCCTGACCCAAGAGCACCATAACAT...GTTTGGGAGAACACGTAACTGTTGAAAAACTACCTGGGAGGAGTGAGTTCCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
CDS-3UTR CCA 90 bp ATGGTAGAACTCGGACTTGCAAGTTACCATCTCGCTACCCTGGGCGTCCTCACGCAAACCTTAATTTGTTaGGCAGGGTTAGGCATAATA +
Preference number: 4 (lower is better)
Translates to: MVELGLASYHLATLGVLTQTLIC*AGLGII
Trigger: TATTATGCCTAACCCTGCCCAACAAATTAAGGTTTG...CGTGAGGACGCCCAGGGTAGCGAGATGGTAACTTGCAAGTCCGAGTTCTACCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648349.2
CDS-3UTR CCA 90 bp GGGTCAGGATCTCGCACTCTGCTCTGCTTCCTCCTCAAGGGGAATGAACACGAAAGTACTAGGAATAAATaGAGACTAACTGGCATACAG +
Preference number: 4 (lower is better)
Translates to: GSGSRTLLCFLLKGNEHESTRNK*RLTGIQ
Trigger: CTGTATGCCAGTTAGTCTCCATTTATTCCTAGTACT...TTCGTGTTCATTCCCCTTGAGGAGGAAGCAGAGCAGAGTGCGAGATCCTGACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648349.2
CDS-3UTR CCA 90 bp GCAGTCAGACATGAGTTCCCTTCAGGGAAAATGCACCTTAGTATTTTAACTTTGACTGTGCGGCACATCTaGCCTGGTGCCTCTGGCATA +
Preference number: 4 (lower is better)
Translates to: AVRHEFPSGKMHLSILTLTVRHI*PGASGI
Trigger: TATGCCAGAGGCACCAGGCCAGATGTGCCGCACAGT...CAAAGTTAAAATACTAAGGTGCATTTTCCCTGAAGGGAACTCATGTCTGACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
CDS-3UTR CCA 90 bp ACAGTTCCTAGTGGGTGCTCATCAGACATGTGTTGGCTGACCCAAGGCGGGTTTAAAATCAGTCACTCTTaGAGTGCCCTTTTCAACAGA +
Preference number: 4 (lower is better)
Translates to: TVPSGCSSDMCWLTQGGFKISHS*SALFNR
Trigger: TCTGTTGAAAAGGGCACTCCAAGAGTGACTGATTTT...AAACCCGCCTTGGGTCAGCCAACACATGTCTGATGAGCACCCACTAGGAACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CCA 90 bp AAGATCTCCCGAGAGGAAGAGTCTTGCCTACAACTGGTGAGCCTCCTCATCTTCCAAAGGGGTATGTCCTaGAAAGATTTTGACACCCAT +
Preference number: 4 (lower is better)
Translates to: KISREEESCLQLVSLLIFQRGMS*KDFDTH
Trigger: ATGGGTGTCAAAATCTTTCCAGGACATACCCCTTTG...GAAGATGAGGAGGCTCACCAGTTGTAGGCAAGACTCTTCCTCTCGGGAGATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CCA 90 bp ACTTCTTTACTTCTTAAGCTGATGATACCCTTTTGCCCGCCCCATGTACCAGATACTTTCTACGGAGCGTaGTGGCTCATGCCTGTAGTC +
Preference number: 4 (lower is better)
Translates to: TSLLLKLMIPFCPPHVPDTFYGA*WLMPVV
Trigger: GACTACAGGCATGAGCCACCACGCTCCGTAGAAAGT...ATCTGGTACATGGGGCGGGCAAAAGGGTATCATCAGCTTAAGAAGTAAAGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR TCA 90 bp ACTTCTTTACTTCTTAAGCTGATGATACCCTTTTGCCCGCCCCATGTACCAGATATTCTTCCGTGCTGCTaGCGTCTCGGAAATGAGTCT +
Preference number: 4 (lower is better)
Translates to: TSLLLKLMIPFCPPHVPDILPCC*RLGNES
Trigger: AGACTCATTTCCGAGACGTCAGCAGCACGGAAGAAT...ATCTGGTACATGGGGCGGGCAAAAGGGTATCATCAGCTTAAGAAGTAAAGAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR TCA 90 bp GAACCCCATAGGCACAGCATCTTTCAGCAACTTTTGACGCATTGTACTGACTTCCCTCCTCAAGGGGAATaGACACGAATACGGAATAAG +
Preference number: 4 (lower is better)
Translates to: EPHRHSIFQQLLTHCTDFPPQGE*TRIRNK
Trigger: CTTATTCCGTATTCGTGTTCATTCCCCTTGAGGAGG...GAAGTCAGTACAATGCGTCAAAAGTTGCTGAAAGATGCTGTGCCTATGGGGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
CDS-3UTR TCA 90 bp GAACCCCATAGGCACAGCATCTTTCAGCAACTTTTGACGCATTGTACTGACTTCCCTGGTTTGGTACACTaGGGTAGGAATGTACCAAAG +
Preference number: 4 (lower is better)
Translates to: EPHRHSIFQQLLTHCTDFPGLVH*GRNVPK
Trigger: CTTTGGTACATTCCTACCTCAGTGTACCAAACCAGG...GAAGTCAGTACAATGCGTCAAAAGTTGCTGAAAGATGCTGTGCCTATGGGGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR TCA 90 bp CCCCATAGGCACAGCATCTTTCAGCAACTTTTGACGCATTGTACTGACTTCCAGACCTCAACTCTGCACTaGGGAAACACTTTAAGTGAG +
Preference number: 4 (lower is better)
Translates to: PHRHSIFQQLLTHCTDFQTSTLH*GNTLSE
Trigger: CTCACTTAAAGTGTTTCCTCAGTGCAGAGTTGAGGT...CTGGAAGTCAGTACAATGCGTCAAAAGTTGCTGAAAGATGCTGTGCCTATGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR TCA 90 bp ACAGTTCCTAGTGGGTGCTCATCAGACATGTGTTGGCTGACCCAAGGCGGGTTTTTGTCATTCTACTATTaGAAGCAAGCCCTTTACTCT +
Preference number: 4 (lower is better)
Translates to: TVPSGCSSDMCWLTQGGFLSFYY*KQALYS
Trigger: AGAGTAAAGGGCTTGCTTTCAATAGTAGAATGACAA...AAACCCGCCTTGGGTCAGCCAACACATGTCTGATGAGCACCCACTAGGAACTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR GCA 90 bp TTGCAATTCGCAATGCGTAAGGCTGCACATCCTGTACGGCGAAGGTCGGATGGAATGGTCAAATCAGGTTaGTTTGTCCAGGTTTTAGAA +
Preference number: 4 (lower is better)
Translates to: LQFAMRKAAHPVRRRSDGMVKSG*FVQVLE
Trigger: TTCTAAAACCTGGACAAAGCAACCTGATTTGACCAT...TCCATCCGACCTTCGCCGTACAGGATGTGCAGCCTTACGCATTGCGAATTGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000650388.1
CDS-3UTR GCA 90 bp ACTTCTTTACTTCTTAAGCTGATGATACCCTTTTGCCCGCCCCATGTACCAGATGCTTGCAATTCGCAATaGGTAAGGCTGCACATCCTG +
Preference number: 4 (lower is better)
Translates to: TSLLLKLMIPFCPPHVPDACNSQ*VRLHIL
Trigger: CAGGATGTGCAGCCTTACGCATTGCGAATTGCAAGC...ATCTGGTACATGGGGCGGGCAAAAGGGTATCATCAGCTTAAGAAGTAAAGAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR GCA 90 bp GCCTCGTTCATAGGTGGCAATGCTGTCCATGTATTTGCATCTGGATCATACTTTGCTTGCAATTCGCAATaGGTAAGGCTGCACATCCTG +
Preference number: 4 (lower is better)
Translates to: ASFIGGNAVHVFASGSYFACNSQ*VRLHIL
Trigger: CAGGATGTGCAGCCTTACGCATTGCGAATTGCAAGC...AAAGTATGATCCAGATGCAAATACATGGACAGCATTGCCACCTATGAACGAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000650388.1
CDS-3UTR GCA 90 bp GAACCCCATAGGCACAGCATCTTTCAGCAACTTTTGACGCATTGTACTGACTTCCTACCCCAGAAAGGATaGGTGACGTGTCTTGATCTA +
Preference number: 4 (lower is better)
Translates to: EPHRHSIFQQLLTHCTDFLPQKG*VTCLDL
Trigger: TAGATCAAGACACGTCACGCATCCTTTCTGGGGTAG...GAAGTCAGTACAATGCGTCAAAAGTTGCTGAAAGATGCTGTGCCTATGGGGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
CDS-3UTR GCA 90 bp AGATCTCCACACTGTCACTACGAAAATGTGCAGACAACAGCTGACTGGTACACACAAAGACCTGGCTTCTaGTTTTGGTTCTTGCTCCTC +
Preference number: 4 (lower is better)
Translates to: RSPHCHYENVQTTADWYTQRPGF*FWFLLL
Trigger: GAGGAGCAAGAACCAAAAGCAGAAGCCAGGTCTTTG...TGTGTACCAGTCAGCTGTTGTCTGCACATTTTCGTAGTGACAGTGTGGAGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR GCA 90 bp TTTTTCAACAGTTACGTGTTCTCCCAAACAAGAGCTAAAGCTCAAGTTTGTAAGCCAGGAGGCGGAGATTaGAGTGAGCCGAGATCGCAC +
Preference number: 4 (lower is better)
Translates to: FFNSYVFSQTRAKAQVCKPGGGD*SEPRSH
Trigger: GTGCGATCTCGGCTCACTGCAATCTCCGCCTCCTGG...CTTACAAACTTGAGCTTTAGCTCTTGTTTGGGAGAACACGTAACTGTTGAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR GCA 90 bp AAGATCTCCCGAGAGGAAGAGTCTTGCCTACAACTGGTGAGCCTCCTCATCTTCTTTCATATAGCAACGTaGTTTCTTGAACCGAGACGT +
Preference number: 4 (lower is better)
Translates to: KISREEESCLQLVSLLIFFHIAT*FLEPRR
Trigger: ACGTCTCGGTTCAAGAAAGCACGTTGCTATATGAAA...GAAGATGAGGAGGCTCACCAGTTGTAGGCAAGACTCTTCCTCTCGGGAGATCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR GCA 90 bp CATAATTTGTCTAAAACTCTCACTAGTGAATGCCACTGGGAAACTTCTATTACAGTGGGAAGGTTGCCGTaGCAACCTCCCCTAGGGCAG +
Preference number: 4 (lower is better)
Translates to: HNLSKTLTSECHWETSITVGRLP*QPPLGQ
Trigger: CTGCCCTAGGGGAGGTTGGCACGGCAACCTTCCCAC...TGTAATAGAAGTTTCCCAGTGGCATTCACTAGTGAGAGTTTTAGACAAATTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR GCA 90 bp CAGCTGCTGAATGCCAAGGTACTGTTCTGTACAGGACATTTCACCAAAGCAAATCTGATGATACCCTTTTaGCCGCCCCATGTACCAGAT +
Preference number: 4 (lower is better)
Translates to: QLLNAKVLFCTGHFTKANLMIPF*PPHVPD
Trigger: ATCTGGTACATGGGGCGGGCAAAAGGGTATCATCAG...ATTTGCTTTGGTGAAATGTCCTGTACAGAACAGTACCTTGGCATTCAGCAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CCA 90 bp GGTGGCAATGCTGTCCATGTATTTGCATCTGGATCATACTTTTCTCCTGAGCTATCCACTGCTGGGTCCTaGGATCATAACACTCTACAG +
Preference number: 4 (lower is better)
Translates to: GGNAVHVFASGSYFSPELSTAGS*DHNTLQ
Trigger: CTGTAGAGTGTTATGATCCCAGGACCCAGCAGTGGA...TAGCTCAGGAGAAAAGTATGATCCAGATGCAAATACATGGACAGCATTGCCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000650388.1
CDS-3UTR CCA 90 bp TGTCCAGGTTTTAGAATAAATATCGTAACACTCCATGGAAATCAGCTCCTTTTCACCATCTCGCTACCCTaGGCGTCCTCACGACTTCGG +
Preference number: 4 (lower is better)
Translates to: CPGFRINIVTLHGNQLLFTISLP*ASSRLR
Trigger: CCGAAGTCGTGAGGACGCCCAGGGTAGCGAGATGGT...GAAAAGGAGCTGATTTCCATGGAGTGTTACGATATTTATTCTAAAACCTGGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000650388.1
CDS-3UTR CCA 90 bp CATAGAGAGGGCACATGCATCGCATCGCTGCTGTGGGTTTCCGTGAAACTCTCTACTAGTGAATGCCACTaGGAAACTTCTATTACAAAG +
Preference number: 4 (lower is better)
Translates to: HREGTCIASLLWVSVKLSTSECH*ETSITK
Trigger: CTTTGTAATAGAAGTTTCCCAGTGGCATTCACTAGT...AGAGAGTTTCACGGAAACCCACAGCAGCGATGCGATGCATGTGCCCTCTCTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648349.2
CDS-3UTR CCA 90 bp AGGCGGAAAAGCTTGCAATTCGCAATGCGTAAGGCTGCACATCCTGTACGGCGATTTTATGTCTATGGGTaGGAGAACGTAAGTGATGTT +
Preference number: 4 (lower is better)
Translates to: RRKSLQFAMRKAAHPVRRFYVYG*ENVSDV
Trigger: AACATCACTTACGTTCTCCCACCCATAGACATAAAA...TCGCCGTACAGGATGTGCAGCCTTACGCATTGCGAATTGCAAGCTTTTCCGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648349.2
CDS-3UTR CCA 90 bp ACAGTTCCTAGTGGGTGCTCATCAGACATGTGTTGGCTGACCCAAGGCGGGTTTTTTTATGTCTATGGGTaGGAGAACGTAAGTGATGTT +
Preference number: 4 (lower is better)
Translates to: TVPSGCSSDMCWLTQGGFFYVYG*ENVSDV
Trigger: AACATCACTTACGTTCTCCCACCCATAGACATAAAA...AAACCCGCCTTGGGTCAGCCAACACATGTCTGATGAGCACCCACTAGGAACTGT
47% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CCA 90 bp CTCTCCCTTTCGGAGCTATGTTATGGTGCTCTTGGGTCAGGATCTCGCACTCTGATCTTCTGGCTAAAATaGAGAGTTAATGTACCACAC +
Preference number: 4 (lower is better)
Translates to: LSLSELCYGALGSGSRTLIFWLK*RVNVPH
Trigger: GTGTGGTACATTAACTCTCCATTTTAGCCAGAAGAT...CAGAGTGCGAGATCCTGACCCAAGAGCACCATAACATAGCTCCGAAAGGGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
CDS-3UTR CCA 90 bp TTTGCTTTCATTAAAAAGATCTCCACACTGTCACTACGAAAATGTGCAGACAACGCCTGTAGTCCCAGCTaGGTCTCCACATCTGAGGCC +
Preference number: 4 (lower is better)
Translates to: FAFIKKISTLSLRKCADNACSPS*VSTSEA
Trigger: GGCCTCAGATGTGGAGACCCAGCTGGGACTACAGGC...GTTGTCTGCACATTTTCGTAGTGACAGTGTGGAGATCTTTTTAATGAAAGCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CCA 90 bp AGCTGGTTGTGGAAAGTGCTAGTATGCAGGTCTGCTCAGGGATCTGTGAGGCTCAAGCCTTTGTTCTCATaGAAATCACTTCCAGGAAAT +
Preference number: 4 (lower is better)
Translates to: SWLWKVLVCRSAQGSVRLKPLFS*KSLPGN
Trigger: ATTTCCTGGAAGTGATTTCCATGAGAACAAAGGCTT...GAGCCTCACAGATCCCTGAGCAGACCTGCATACTAGCACTTTCCACAACCAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CCA 90 bp ACAGTTCCTAGTGGGTGCTCATCAGACATGTGTTGGCTGACCCAAGGCGGGTTTTATGCTCTCAACCACTaGGTTTGTAAGGAAAGTATA +
Preference number: 4 (lower is better)
Translates to: TVPSGCSSDMCWLTQGGFYALNH*VCKESI
Trigger: TATACTTTCCTTACAAACCCAGTGGTTGAGAGCATA...AAACCCGCCTTGGGTCAGCCAACACATGTCTGATGAGCACCCACTAGGAACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CCA 90 bp CACTGGGAAACTTCTATTACAAAGACTAGATTCTTAACACAGATTCGCATTCTACTTGAGCCTGGGAGATaGCGCCACTGCACTCCAGCC +
Preference number: 4 (lower is better)
Translates to: HWETSITKTRFLTQIRILLEPGR*RHCTPA
Trigger: GGCTGGAGTGCAGTGGCGCCATCTCCCAGGCTCAAG...TAGAATGCGAATCTGTGTTAAGAATCTAGTCTTTGTAATAGAAGTTTCCCAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CCA 90 bp CAGCTGCTGAATGCCAAGGTACTGTTCTGTACAGGACATTTCACCAAAGCAAATGCTCTGGCCATTATGTaGTCTGAAGAACCAGAAGGG +
Preference number: 4 (lower is better)
Translates to: QLLNAKVLFCTGHFTKANALAIM*SEEPEG
Trigger: CCCTTCTGGTTCTTCAGACCACATAATGGCCAGAGC...ATTTGCTTTGGTGAAATGTCCTGTACAGAACAGTACCTTGGCATTCAGCAGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CCA 90 bp GGAGGAACTCACTCCTCCCAGGTAGTTTTTCAACAGTTACGTGTTCTCCCAAACCTAGTGTGTCATGAATaGGTCTCACTCACAGATAGG +
Preference number: 4 (lower is better)
Translates to: GGTHSSQVVFQQLRVLPNLVCHE*VSLTDR
Trigger: CCTATCTGTGAGTGAGACCCATTCATGACACACTAG...GTTTGGGAGAACACGTAACTGTTGAAAAACTACCTGGGAGGAGTGAGTTCCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR CAA 72 bp GATACTGCGGTGTTTCTAGCACTCCTTGGAAGGTTTTaGGAATCCCTGGTTTGGTACACTGAGGTAGGAATG +
Preference number: 4 (lower is better)
Translates to: DTAVFLALLGRF*ESLVWYTEVGM
Trigger: CATTCCTACCTCAGTGTACCAAACCAGGGATTCCAAAAACCTTCCAAGGAGTGCTAGAAACACCGCAGTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR TCA 90 bp CAAGTGCAGTGGAAAAGCAGTCTTGGCATGTTTGGATATGTTGATTTGCATATACTTGCTGCGGCTGGCTaGGCGGTATATTGCTACACT +
Preference number: 4 (lower is better)
Translates to: QVQWKSSLGMFGYVDLHILAAAG*AVYCYT
Trigger: AGTGTAGCAATATACCGCTCAGCCAGCCGCAGCAAG...TATATGCAAATCAACATATCCAAACATGCCAAGACTGCTTTTCCACTGCACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
CDS-3UTR TCA 90 bp GGTGGCAATGCTGTCCATGTATTTGCATCTGGATCATACTTTTCTCCTGAGCTACCTCCTCAAGGGGAATaGACACGAATACGGAATAAG +
Preference number: 4 (lower is better)
Translates to: GGNAVHVFASGSYFSPELPPQGE*TRIRNK
Trigger: CTTATTCCGTATTCGTGTTCATTCCCCTTGAGGAGG...TAGCTCAGGAGAAAAGTATGATCCAGATGCAAATACATGGACAGCATTGCCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648349.2
CDS-3UTR TCA 90 bp CCCCATAGGCACAGCATCTTTCAGCAACTTTTGACGCATTGTACTGACTTCCAGATGAGGGCTGCAACCTaGCTCATCAATTTACTGAAT +
Preference number: 4 (lower is better)
Translates to: PHRHSIFQQLLTHCTDFQMRAAT*LINLLN
Trigger: ATTCAGTAAATTGATGAGTCAGGTTGCAGCCCTCAT...CTGGAAGTCAGTACAATGCGTCAAAAGTTGCTGAAAGATGCTGTGCCTATGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
CDS-3UTR TCA 90 bp GAACCCCATAGGCACAGCATCTTTCAGCAACTTTTGACGCATTGTACTGACTTCAATGGTTTTGCTCATTaGGAAGGCAGAATGGCACTG +
Preference number: 4 (lower is better)
Translates to: EPHRHSIFQQLLTHCTDFNGFAH*EGRMAL
Trigger: CAGTGCCATTCTGCCTTCTCAATGAGCAAAACCATT...GAAGTCAGTACAATGCGTCAAAAGTTGCTGAAAGATGCTGTGCCTATGGGGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
CDS-3UTR TCA 90 bp AGATCTCCACACTGTCACTACGAAAATGTGCAGACAACAGCTGACTGGTACACAAATGGTTTTGCTCATTaGGAAGGCAGAATGGCACTG +
Preference number: 4 (lower is better)
Translates to: RSPHCHYENVQTTADWYTNGFAH*EGRMAL
Trigger: CAGTGCCATTCTGCCTTCTCAATGAGCAAAACCATT...TGTGTACCAGTCAGCTGTTGTCTGCACATTTTCGTAGTGACAGTGTGGAGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
CDS-3UTR TCA 90 bp CAGCTGCTGAATGCCAAGGTACTGTTCTGTACAGGACATTTCACCAAAGCAAATCCCAATTACAGCTGCTaGATGCCAAGGTACTGTTCT +
Preference number: 4 (lower is better)
Translates to: QLLNAKVLFCTGHFTKANPNYSC*MPRYCS
Trigger: AGAACAGTACCTTGGCATTCAGCAGCTGTAATTGGG...ATTTGCTTTGGTGAAATGTCCTGTACAGAACAGTACCTTGGCATTCAGCAGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
CDS-3UTR TCA 90 bp TTTTTCAACAGTTACGTGTTCTCCCAAACAAGAGCTAAAGCTCAAGTTTGTAAGAATCAGGTCCCTTGGTaGCGACGTGCCCCATCAGCA +
Preference number: 4 (lower is better)
Translates to: FFNSYVFSQTRAKAQVCKNQVPW*RRAPSA
Trigger: TGCTGATGGGGCACGTCGTCACCAAGGGACCTGATT...CTTACAAACTTGAGCTTTAGCTCTTGTTTGGGAGAACACGTAACTGTTGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR TCA 90 bp CATAATTTGTCTAAAACTCTCACTAGTGAATGCCACTGGGAAACTTCTATTACAAGCACAACACTGGCATaGGCCAACAGGAGCCACGCC +
Preference number: 4 (lower is better)
Translates to: HNLSKTLTSECHWETSITSTTLA*ANRSHA
Trigger: GGCGTGGCTCCTGTTGGCTCATGCCAGTGTTGTGCT...TGTAATAGAAGTTTCCCAGTGGCATTCACTAGTGAGAGTTTTAGACAAATTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR TCA 90 bp TTTAATCCTGCTGAAGAAGAGAAACGCGAACACCAAGTAAAACTTACTATAAACCAGGTCCTGGGTTCGTaGGAAGGGACCAACCCCACA +
Preference number: 4 (lower is better)
Translates to: FNPAEEEKREHQVKLTINQVLGS*EGTNPT
Trigger: TGTGGGGTTGGTCCCTTCTCACGAACCCAGGACCTG...GTTTATAGTAAGTTTTACTTGGTGTTCGCGTTTCTCTTCTTCAGCAGGATTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR GCA 90 bp AGCTGGTTGTGGAAAGTGCTAGTATGCAGGTCTGCTCAGGGATCTGTGAGGCTCTATTTCTGTATCATGTaGTATCCATCGAATTACTGC +
Preference number: 4 (lower is better)
Translates to: SWLWKVLVCRSAQGSVRLYFCIM*YPSNYC
Trigger: GCAGTAATTCGATGGATAGCACATGATACAGAAATA...GAGCCTCACAGATCCCTGAGCAGACCTGCATACTAGCACTTTCCACAACCAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR GCA 90 bp CATAATTTGTCTAAAACTCTCACTAGTGAATGCCACTGGGAAACTTCTATTACAATCGCCTCCCCTTGCTaGGGCTGGCTGAGCGGTATA +
Preference number: 4 (lower is better)
Translates to: HNLSKTLTSECHWETSITIASPC*GWLSGI
Trigger: TATACCGCTCAGCCAGCCGCAGCAAGGGGAGGCGAT...TGTAATAGAAGTTTCCCAGTGGCATTCACTAGTGAGAGTTTTAGACAAATTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
CDS-3UTR GCA 90 bp AAGATCTCCCGAGAGGAAGAGTCTTGCCTACAACTGGTGAGCCTCCTCATCTTCTGCTGTCCATGTATTTaGATCTGGATCATACTTTTC +
Preference number: 4 (lower is better)
Translates to: KISREEESCLQLVSLLIFCCPCI*IWIILF
Trigger: GAAAAGTATGATCCAGATGCAAATACATGGACAGCA...GAAGATGAGGAGGCTCACCAGTTGTAGGCAAGACTCTTCCTCTCGGGAGATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR GCA 90 bp GAACACGAATACGGAATAAGCCTTGCTGAAGCTGCAGGCGGAAAAGCTTGCAATGTTCATAGGTGGCAATaGTGTCCATGTATTTGCATC +
Preference number: 4 (lower is better)
Translates to: EHEYGISLAEAAGGKACNVHRWQ*CPCICI
Trigger: GATGCAAATACATGGACAGCATTGCCACCTATGAAC...ATTGCAAGCTTTTCCGCCTGCAGCTTCAGCAAGGCTTATTCCGTATTCGTGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000650388.1
CDS-3UTR GCA 90 bp AGATCTCCACACTGTCACTACGAAAATGTGCAGACAACAGCTGACTGGTACACATCCGAAGTTATGTCTTaGCTCGTTCATAGGTGGCAA +
Preference number: 4 (lower is better)
Translates to: RSPHCHYENVQTTADWYTSEVMS*LVHRWQ
Trigger: TTGCCACCTATGAACGAGGCAAGACATAACTTCGGA...TGTGTACCAGTCAGCTGTTGTCTGCACATTTTCGTAGTGACAGTGTGGAGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
CDS-3UTR GCA 90 bp CAAGTGCAGTGGAAAAGCAGTCTTGGCATGTTTGGATATGTTGATTTGCATATACAGGATCTCGCACTCTaGTCTGCTTCCTCCTCAAGG +
Preference number: 4 (lower is better)
Translates to: QVQWKSSLGMFGYVDLHIQDLAL*SASSSR
Trigger: CCTTGAGGAGGAAGCAGAGCAGAGTGCGAGATCCTG...TATATGCAAATCAACATATCCAAACATGCCAAGACTGCTTTTCCACTGCACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
CDS-3UTR GCA 90 bp CAGCTGCTGAATGCCAAGGTACTGTTCTGTACAGGACATTTCACCAAAGCAAATCTACCCCAGAAAGGATaGGTGACGTGTCTTGATCTA +
Preference number: 4 (lower is better)
Translates to: QLLNAKVLFCTGHFTKANLPQKG*VTCLDL
Trigger: TAGATCAAGACACGTCACGCATCCTTTCTGGGGTAG...ATTTGCTTTGGTGAAATGTCCTGTACAGAACAGTACCTTGGCATTCAGCAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
CDS-3UTR GCA 90 bp CTCTCCCTTTCGGAGCTATGTTATGGTGCTCTTGGGTCAGGATCTCGCACTCTGAATAAGACAAAATGCTaGTTCTTACAGCCATATTCC +
Preference number: 4 (lower is better)
Translates to: LSLSELCYGALGSGSRTLNKTKC*FLQPYS
Trigger: GGAATATGGCTGTAAGAAGCAGCATTTTGTCTTATT...CAGAGTGCGAGATCCTGACCCAAGAGCACCATAACATAGCTCCGAAAGGGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
CDS-3UTR GCA 90 bp GCAGTCAGACATGAGTTCCCTTCAGGGAAAATGCACCTTAGTATTTTAACTTTGACCCAAGGCGGGTTTTaGTACACTCAGCTGCTCTCT +
Preference number: 4 (lower is better)
Translates to: AVRHEFPSGKMHLSILTLTQGGF*YTQLLS
Trigger: AGAGAGCAGCTGAGTGTAGCAAAACCCGCCTTGGGT...CAAAGTTAAAATACTAAGGTGCATTTTCCCTGAAGGGAACTCATGTCTGACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR GCA 90 bp AAGATCTCCCGAGAGGAAGAGTCTTGCCTACAACTGGTGAGCCTCCTCATCTTCTTGTCAAATGTTTATTaGCTACCTACTCTGTGCAAG +
Preference number: 4 (lower is better)
Translates to: KISREEESCLQLVSLLIFLSNVY*LPTLCK
Trigger: CTTGCACAGAGTAGGTAGGCAATAAACATTTGACAA...GAAGATGAGGAGGCTCACCAGTTGTAGGCAAGACTCTTCCTCTCGGGAGATCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR GCA 90 bp TTTAATCCTGCTGAAGAAGAGAAACGCGAACACCAAGTAAAACTTACTATAAACCGACCACGTGTGGAGTaGAGAAGGCGCATACCGGAG +
Preference number: 4 (lower is better)
Translates to: FNPAEEEKREHQVKLTINRPRVE*RRRIPE
Trigger: CTCCGGTATGCGCCTTCTGCACTCCACACGTGGTCG...GTTTATAGTAAGTTTTACTTGGTGTTCGCGTTTCTCTTCTTCAGCAGGATTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR GCA 90 bp TTTGCTTTCATTAAAAAGATCTCCACACTGTCACTACGAAAATGTGCAGACAACATGTGTCCTTGGCGGTaGCTCAGAAGGCACCTGGGT +
Preference number: 4 (lower is better)
Translates to: FAFIKKISTLSLRKCADNMCPWR*LRRHLG
Trigger: ACCCAGGTGCCTTCTGAGGCACCGCCAAGGACACAT...GTTGTCTGCACATTTTCGTAGTGACAGTGTGGAGATCTTTTTAATGAAAGCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CCA 90 bp AGATCTCCACACTGTCACTACGAAAATGTGCAGACAACAGCTGACTGGTACACATGCCTCGTTCATAGGTaGCAATGCTGTCCATGTATT +
Preference number: 4 (lower is better)
Translates to: RSPHCHYENVQTTADWYTCLVHR*QCCPCI
Trigger: AATACATGGACAGCATTGCCACCTATGAACGAGGCA...TGTGTACCAGTCAGCTGTTGTCTGCACATTTTCGTAGTGACAGTGTGGAGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
CDS-3UTR CCA 90 bp ATGGTTCATTCAGCATCTGTTCCCGTAAATAACTGGAGTCCAACCCTGAAACCCAGGAGCCTCCACCCATaGCGTAGATTTTCTTTTTCA +
Preference number: 4 (lower is better)
Translates to: MVHSASVPVNNWSPTLKPRSLHP*RRFSFS
Trigger: TGAAAAAGAAAATCTACGCCATGGGTGGAGGCTCCT...GGGTTTCAGGGTTGGACTCCAGTTATTTACGGGAACAGATGCTGAATGAACCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000650388.1
CDS-3UTR CCA 90 bp GGTGGCAATGCTGTCCATGTATTTGCATCTGGATCATACTTTTCTCCTGAGCTATTCGGAGCTATGTTATaGTGCTCTTGGGTCAGGATC +
Preference number: 4 (lower is better)
Translates to: GGNAVHVFASGSYFSPELFGAML*CSWVRI
Trigger: GATCCTGACCCAAGAGCACCATAACATAGCTCCGAA...TAGCTCAGGAGAAAAGTATGATCCAGATGCAAATACATGGACAGCATTGCCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648349.2
CDS-3UTR CCA 90 bp ACTTCTTTACTTCTTAAGCTGATGATACCCTTTTGCCCGCCCCATGTACCAGATACAGCCACATTTAACTaGAGGAACTCACTCCTCCCA +
Preference number: 4 (lower is better)
Translates to: TSLLLKLMIPFCPPHVPDTATFN*RNSLLP
Trigger: TGGGAGGAGTGAGTTCCTCCAGTTAAATGTGGCTGT...ATCTGGTACATGGGGCGGGCAAAAGGGTATCATCAGCTTAAGAAGTAAAGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CCA 90 bp AGCTGGTTGTGGAAAGTGCTAGTATGCAGGTCTGCTCAGGGATCTGTGAGGCTCGTTTCAAGGCATAAGTaGAATGTTAAAACACAAACC +
Preference number: 4 (lower is better)
Translates to: SWLWKVLVCRSAQGSVRLVSRHK*NVKTQT
Trigger: GGTTTGTGTTTTAACATTCCACTTATGCCTTGAAAC...GAGCCTCACAGATCCCTGAGCAGACCTGCATACTAGCACTTTCCACAACCAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CCA 90 bp CAGCTGCTGAATGCCAAGGTACTGTTCTGTACAGGACATTTCACCAAAGCAAATCCTGGCTTCTGCTTTTaGTTCTTGCTCCTCCCTAAA +
Preference number: 4 (lower is better)
Translates to: QLLNAKVLFCTGHFTKANPGFCF*FLLLPK
Trigger: TTTAGGGAGGAGCAAGAACCAAAAGCAGAAGCCAGG...ATTTGCTTTGGTGAAATGTCCTGTACAGAACAGTACCTTGGCATTCAGCAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CCA 90 bp ACTTCTTTACTTCTTAAGCTGATGATACCCTTTTGCCCGCCCCATGTACCAGATAGCCACAGTGGAACATaGAGAGAACAATCAAGGCTG +
Preference number: 4 (lower is better)
Translates to: TSLLLKLMIPFCPPHVPDSHSGT*REQSRL
Trigger: CAGCCTTGATTGTTCTCTCCATGTTCCACTGTGGCT...ATCTGGTACATGGGGCGGGCAAAAGGGTATCATCAGCTTAAGAAGTAAAGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CCA 90 bp CATAATTTGTCTAAAACTCTCACTAGTGAATGCCACTGGGAAACTTCTATTACAAGGTGCCTAAGGCGCTaGGATGTGTCCTTGGCGGTG +
Preference number: 4 (lower is better)
Translates to: HNLSKTLTSECHWETSITRCLRR*DVSLAV
Trigger: CACCGCCAAGGACACATCCCAGCGCCTTAGGCACCT...TGTAATAGAAGTTTCCCAGTGGCATTCACTAGTGAGAGTTTTAGACAAATTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CCA 90 bp TTTTTCAACAGTTACGTGTTCTCCCAAACAAGAGCTAAAGCTCAAGTTTGTAAGCTCTGCGGACAGACATaGCAGAGGGCCTGTCACACA +
Preference number: 4 (lower is better)
Translates to: FFNSYVFSQTRAKAQVCKLCGQT*QRACHT
Trigger: TGTGTGACAGGCCCTCTGCCATGTCTGTCCGCAGAG...CTTACAAACTTGAGCTTTAGCTCTTGTTTGGGAGAACACGTAACTGTTGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR CAA 72 bp TGCTGCGGCTGGCTGAGCGGTATATTGCTACACTCTTaGACAATTTCTCGTACTAATGGTTCATTCAGCATC +
Preference number: 4 (lower is better)
Translates to: CCGWLSGILLHS*TISRTNGSFSI
Trigger: GATGCTGAATGAACCATTAGTACGAGAAATTGTCAAAGAGTGTAGCAATATACCGCTCAGCCAGCCGCAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000650388.1
CDS-3UTR TCA 90 bp ACTTCTTTACTTCTTAAGCTGATGATACCCTTTTGCCCGCCCCATGTACCAGATTACAGCAGTCAGACATaGGTTCCCTTCAGGGAAAAT +
Preference number: 4 (lower is better)
Translates to: TSLLLKLMIPFCPPHVPDYSSQT*VPFREN
Trigger: ATTTTCCCTGAAGGGAACTCATGTCTGACTGCTGTA...ATCTGGTACATGGGGCGGGCAAAAGGGTATCATCAGCTTAAGAAGTAAAGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR TCA 90 bp CAGCTGCTGAATGCCAAGGTACTGTTCTGTACAGGACATTTCACCAAAGCAAATATGCGTGACGTGTCTTaGTCTAAGTCAACACAGAAG +
Preference number: 4 (lower is better)
Translates to: QLLNAKVLFCTGHFTKANMRDVS*SKSTQK
Trigger: CTTCTGTGTTGACTTAGATCAAGACACGTCACGCAT...ATTTGCTTTGGTGAAATGTCCTGTACAGAACAGTACCTTGGCATTCAGCAGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
CDS-3UTR TCA 90 bp CAGCTGCTGAATGCCAAGGTACTGTTCTGTACAGGACATTTCACCAAAGCAAATAGGAATCAAGCACTTTaGAGTCCCCGATTTCACACT +
Preference number: 4 (lower is better)
Translates to: QLLNAKVLFCTGHFTKANRNQAL*SPRFHT
Trigger: AGTGTGAAATCGGGGACTTCAAAGTGCTTGATTCCT...ATTTGCTTTGGTGAAATGTCCTGTACAGAACAGTACCTTGGCATTCAGCAGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
CDS-3UTR TCA 90 bp ACAGTCCAATCTAACATTTTAGGCACAAACCTTAATTTGTTGGGCAGGGTTAGGACTCTGTGCAAGCACTaGGACTGGCAGATGACAAAG +
Preference number: 4 (lower is better)
Translates to: TVQSNILGTNLNLLGRVRTLCKH*DWQMTK
Trigger: CTTTGTCATCTGCCAGTCTCAGTGCTTGCACAGAGT...CCTAACCCTGCCCAACAAATTAAGGTTTGTGCCTAAAATGTTAGATTGGACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR TCA 90 bp CAAGTGCAGTGGAAAAGCAGTCTTGGCATGTTTGGATATGTTGATTTGCATATACTGGGTCTCCACATCTaGGGCCAGGAGTTTAAGATC +
Preference number: 4 (lower is better)
Translates to: QVQWKSSLGMFGYVDLHILGLHI*GQEFKI
Trigger: GATCTTAAACTCCTGGCCTCAGATGTGGAGACCCAG...TATATGCAAATCAACATATCCAAACATGCCAAGACTGCTTTTCCACTGCACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR TCA 90 bp ACTTCTTTACTTCTTAAGCTGATGATACCCTTTTGCCCGCCCCATGTACCAGATGTAGATGGAGAGAGGTaGTATGGGTCTAGAAAGCAA +
Preference number: 4 (lower is better)
Translates to: TSLLLKLMIPFCPPHVPDVDGER*YGSRKQ
Trigger: TTGCTTTCTAGACCCATATCACCTCTCTCCATCTAC...ATCTGGTACATGGGGCGGGCAAAAGGGTATCATCAGCTTAAGAAGTAAAGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR GCA 90 bp AACACTCTACAGACTCAAAAAGCTTTCCGTAGGAGCCTCCACCCATGGCGTAGATGCTGTCCATGTATTTaGATCTGGATCATACTTTTC +
Preference number: 4 (lower is better)
Translates to: NTLQTQKAFRRSLHPWRRCCPCI*IWIILF
Trigger: GAAAAGTATGATCCAGATGCAAATACATGGACAGCA...TCTACGCCATGGGTGGAGGCTCCTACGGAAAGCTTTTTGAGTCTGTAGAGTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000650388.1
CDS-3UTR GCA 90 bp ACTGGCTCCTATAGGTACAGCTCCATAAACAAAAGAGGAACTGGCGGGGATGCATGCTGTCCATGTATTTaGATCTGGATCATACTTTTC +
Preference number: 4 (lower is better)
Translates to: TGSYRYSSINKRGTGGDACCPCI*IWIILF
Trigger: GAAAAGTATGATCCAGATGCAAATACATGGACAGCA...TGCATCCCCGCCAGTTCCTCTTTTGTTTATGGAGCTGTACCTATAGGAGCCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000650388.1
CDS-3UTR GCA 90 bp ACAGTCCAATCTAACATTTTAGGCACAAACCTTAATTTGTTGGGCAGGGTTAGGGCAGGCGGAAAAGCTTaGAATTCGCAATGCGTAAGG +
Preference number: 4 (lower is better)
Translates to: TVQSNILGTNLNLLGRVRAGGKA*NSQCVR
Trigger: CCTTACGCATTGCGAATTGCAAGCTTTTCCGCCTGC...CCTAACCCTGCCCAACAAATTAAGGTTTGTGCCTAAAATGTTAGATTGGACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
CDS-3UTR GCA 90 bp ACAGTCCAATCTAACATTTTAGGCACAAACCTTAATTTGTTGGGCAGGGTTAGGTTCAGCTGCCATCTCTaGTCTCCCTTTCGGAGCTAT +
Preference number: 4 (lower is better)
Translates to: TVQSNILGTNLNLLGRVRFSCHL*SPFRSY
Trigger: ATAGCTCCGAAAGGGAGAGCAGAGATGGCAGCTGAA...CCTAACCCTGCCCAACAAATTAAGGTTTGTGCCTAAAATGTTAGATTGGACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
CDS-3UTR GCA 90 bp TTCTTCCGTGCTGCTGACGTCTCGGAAATGAGTCTCCAGGTATTCTGTGGCAAGAAACAAGACTTTGTGTaGTTTCAGACAGGTTATATG +
Preference number: 4 (lower is better)
Translates to: FFRAADVSEMSLQVFCGKKQDFV*FQTGYM
Trigger: CATATAACCTGTCTGAAAGCACACAAAGTCTTGTTT...CTTGCCACAGAATACCTGGAGACTCATTTCCGAGACGTCAGCAGCACGGAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648349.2
CDS-3UTR GCA 90 bp GAACCCCATAGGCACAGCATCTTTCAGCAACTTTTGACGCATTGTACTGACTTCCTACCTATTTTAGACTaGAGCCTAGGAGAGGTTCTT +
Preference number: 4 (lower is better)
Translates to: EPHRHSIFQQLLTHCTDFLPILD*SLGEVL
Trigger: AAGAACCTCTCCTAGGCTGCAGTCTAAAATAGGTAG...GAAGTCAGTACAATGCGTCAAAAGTTGCTGAAAGATGCTGTGCCTATGGGGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR GCA 90 bp CAGCTGCTGAATGCCAAGGTACTGTTCTGTACAGGACATTTCACCAAAGCAAATGAATGTGTACAACTGTaGCCTGAAACTGGGCCATTA +
Preference number: 4 (lower is better)
Translates to: QLLNAKVLFCTGHFTKANECVQL*PETGPL
Trigger: TAATGGCCCAGTTTCAGGGCACAGTTGTACACATTC...ATTTGCTTTGGTGAAATGTCCTGTACAGAACAGTACCTTGGCATTCAGCAGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR GCA 90 bp TTTTTCAACAGTTACGTGTTCTCCCAAACAAGAGCTAAAGCTCAAGTTTGTAAGAAGCCCAGATGCACCTaGCACCAAGGCCTATGCTCT +
Preference number: 4 (lower is better)
Translates to: FFNSYVFSQTRAKAQVCKKPRCT*HQGLCS
Trigger: AGAGCATAGGCCTTGGTGGCAGGTGCATCTGGGCTT...CTTACAAACTTGAGCTTTAGCTCTTGTTTGGGAGAACACGTAACTGTTGAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR GCA 90 bp CAAGTGCAGTGGAAAAGCAGTCTTGGCATGTTTGGATATGTTGATTTGCATATAATTCTAGCCTACAGGTaGCTAAGGCGCTGGGATGTG +
Preference number: 4 (lower is better)
Translates to: QVQWKSSLGMFGYVDLHIILAYR*LRRWDV
Trigger: CACATCCCAGCGCCTTAGGCACCTGTAGGCTAGAAT...TATATGCAAATCAACATATCCAAACATGCCAAGACTGCTTTTCCACTGCACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR GCA 90 bp GAACCCCATAGGCACAGCATCTTTCAGCAACTTTTGACGCATTGTACTGACTTCCACCCCAACAGTGGCTaGAAAGATTGTTCAAAACTT +
Preference number: 4 (lower is better)
Translates to: EPHRHSIFQQLLTHCTDFHPNSG*KDCSKL
Trigger: AAGTTTTGAACAATCTTTGCAGCCACTGTTGGGGTG...GAAGTCAGTACAATGCGTCAAAAGTTGCTGAAAGATGCTGTGCCTATGGGGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CCA 90 bp ACAGTCCAATCTAACATTTTAGGCACAAACCTTAATTTGTTGGGCAGGGTTAGGCTTTTAGTGGACATATaGCAGTCCACTGCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: TVQSNILGTNLNLLGRVRLLVDI*QSTAGS
Trigger: GGACCCAGCAGTGGACTGCCATATGTCCACTAAAAG...CCTAACCCTGCCCAACAAATTAAGGTTTGTGCCTAAAATGTTAGATTGGACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
CDS-3UTR CCA 90 bp GCAGTCAGACATGAGTTCCCTTCAGGGAAAATGCACCTTAGTATTTTAACTTTGAGGAGTGGTTTAGTGTaGTGCCAGGTTCCTGTGCTT +
Preference number: 4 (lower is better)
Translates to: AVRHEFPSGKMHLSILTLRSGLV*CQVPVL
Trigger: AAGCACAGGAACCTGGCACCACACTAAACCACTCCT...CAAAGTTAAAATACTAAGGTGCATTTTCCCTGAAGGGAACTCATGTCTGACTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
CDS-3UTR CCA 90 bp TTTTTCAACAGTTACGTGTTCTCCCAAACAAGAGCTAAAGCTCAAGTTTGTAAGGCGGCACATCTGGCCTaGTGCCTCTGGCATATAAGA +
Preference number: 4 (lower is better)
Translates to: FFNSYVFSQTRAKAQVCKAAHLA*CLWHIR
Trigger: TCTTATATGCCAGAGGCACCAGGCCAGATGTGCCGC...CTTACAAACTTGAGCTTTAGCTCTTGTTTGGGAGAACACGTAACTGTTGAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
CDS-3UTR CCA 90 bp CCCCATAGGCACAGCATCTTTCAGCAACTTTTGACGCATTGTACTGACTTCCAGAAATCATTTTCTGGCTaGATGCTCACACCTGTAATC +
Preference number: 4 (lower is better)
Translates to: PHRHSIFQQLLTHCTDFQKSFSG*MLTPVI
Trigger: GATTACAGGTGTGAGCATCCAGCCAGAAAATGATTT...CTGGAAGTCAGTACAATGCGTCAAAAGTTGCTGAAAGATGCTGTGCCTATGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CCA 90 bp GAACCCCATAGGCACAGCATCTTTCAGCAACTTTTGACGCATTGTACTGACTTCAAGCAAATCATTTTCTaGCTGGATGCTCACACCTGT +
Preference number: 4 (lower is better)
Translates to: EPHRHSIFQQLLTHCTDFKQIIF*LDAHTC
Trigger: ACAGGTGTGAGCATCCAGCCAGAAAATGATTTGCTT...GAAGTCAGTACAATGCGTCAAAAGTTGCTGAAAGATGCTGTGCCTATGGGGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CCA 90 bp AGATCTCCACACTGTCACTACGAAAATGTGCAGACAACAGCTGACTGGTACACAGATAGTTCTCTTTCATaGCAGAAGACCTATACCCGT +
Preference number: 4 (lower is better)
Translates to: RSPHCHYENVQTTADWYTDSSLS*QKTYTR
Trigger: ACGGGTATAGGTCTTCTGCCATGAAAGAGAACTATC...TGTGTACCAGTCAGCTGTTGTCTGCACATTTTCGTAGTGACAGTGTGGAGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR TCA 90 bp TTTGCTTTCATTAAAAAGATCTCCACACTGTCACTACGAAAATGTGCAGACAACAAGCCCAGCACAGAGTaGGTTTCAGCTGCCATCTCT +
Preference number: 4 (lower is better)
Translates to: FAFIKKISTLSLRKCADNKPSTE*VSAAIS
Trigger: AGAGATGGCAGCTGAAACTCACTCTGTGCTGGGCTT...GTTGTCTGCACATTTTCGTAGTGACAGTGTGGAGATCTTTTTAATGAAAGCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
CDS-3UTR TCA 90 bp GGAGGAACTCACTCCTCCCAGGTAGTTTTTCAACAGTTACGTGTTCTCCCAAACAACCATCTGGAAGTATaGTTTAATTCCTCAGATGTC +
Preference number: 4 (lower is better)
Translates to: GGTHSSQVVFQQLRVLPNNHLEV*FNSSDV
Trigger: GACATCTGAGGAATTAAATCATACTTCCAGATGGTT...GTTTGGGAGAACACGTAACTGTTGAAAAACTACCTGGGAGGAGTGAGTTCCTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR TCA 90 bp GGAGGAACTCACTCCTCCCAGGTAGTTTTTCAACAGTTACGTGTTCTCCCAAACAAATACTGGGTCAGATaGCAGATAGACACATTTTCT +
Preference number: 4 (lower is better)
Translates to: GGTHSSQVVFQQLRVLPNKYWVR*QIDTFS
Trigger: AGAAAATGTGTCTATCTGTCATCTGACCCAGTATTT...GTTTGGGAGAACACGTAACTGTTGAAAAACTACCTGGGAGGAGTGAGTTCCTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR TCA 90 bp CATAATTTGTCTAAAACTCTCACTAGTGAATGCCACTGGGAAACTTCTATTACATTCCTCCTGACTTGGTaGCCAGGCAAGCTGACAGAC +
Preference number: 4 (lower is better)
Translates to: HNLSKTLTSECHWETSITFLLTW*PGKLTD
Trigger: GTCTGTCAGCTTGCCTGGTCACCAAGTCAGGAGGAA...TGTAATAGAAGTTTCCCAGTGGCATTCACTAGTGAGAGTTTTAGACAAATTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR TCA 90 bp TTTGCTTTCATTAAAAAGATCTCCACACTGTCACTACGAAAATGTGCAGACAACTCATCTTCTTCCTCCTaGCTTGGTGACCAGGCAAGC +
Preference number: 4 (lower is better)
Translates to: FAFIKKISTLSLRKCADNSSSSS*LGDQAS
Trigger: GCTTGCCTGGTCACCAAGTCAGGAGGAAGAAGATGA...GTTGTCTGCACATTTTCGTAGTGACAGTGTGGAGATCTTTTTAATGAAAGCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR TCA 90 bp GCAGTCAGACATGAGTTCCCTTCAGGGAAAATGCACCTTAGTATTTTAACTTTGGGCCATTATGTGGTCTaGAGAACCAGAAGGGCTATT +
Preference number: 4 (lower is better)
Translates to: AVRHEFPSGKMHLSILTLGHYVV*RTRRAI
Trigger: AATAGCCCTTCTGGTTCTTCAGACCACATAATGGCC...CAAAGTTAAAATACTAAGGTGCATTTTCCCTGAAGGGAACTCATGTCTGACTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR TCA 90 bp GAACCCCATAGGCACAGCATCTTTCAGCAACTTTTGACGCATTGTACTGACTTCGAAGACCTATACCCGTaGTGGAAAACAAAAGAATGT +
Preference number: 4 (lower is better)
Translates to: EPHRHSIFQQLLTHCTDFEDLYP*WKTKEC
Trigger: ACATTCTTTTGTTTTCCATCACGGGTATAGGTCTTC...GAAGTCAGTACAATGCGTCAAAAGTTGCTGAAAGATGCTGTGCCTATGGGGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR TCA 90 bp TTTTTCAACAGTTACGTGTTCTCCCAAACAAGAGCTAAAGCTCAAGTTTGTAAGAGTCTTGGACAAGGGTaGCAGTCACATACTCGAGGG +
Preference number: 4 (lower is better)
Translates to: FFNSYVFSQTRAKAQVCKSLGQG*QSHTRG
Trigger: CCCTCGAGTATGTGACTGTCACCCTTGTCCAAGACT...CTTACAAACTTGAGCTTTAGCTCTTGTTTGGGAGAACACGTAACTGTTGAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR TCA 90 bp GAACCCCATAGGCACAGCATCTTTCAGCAACTTTTGACGCATTGTACTGACTTCGACGTGACATTTCAATaGAATCAACTTAGCACGACT +
Preference number: 4 (lower is better)
Translates to: EPHRHSIFQQLLTHCTDFDVTFQ*NQLSTT
Trigger: AGTCGTGCTAAGTTGATTTCATTGAAATGTCACGTC...GAAGTCAGTACAATGCGTCAAAAGTTGCTGAAAGATGCTGTGCCTATGGGGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR TCA 90 bp GGAGGAACTCACTCCTCCCAGGTAGTTTTTCAACAGTTACGTGTTCTCCCAAACATAAAACACTTTCACTaGTCCTTGGTACAAGAGAAC +
Preference number: 4 (lower is better)
Translates to: GGTHSSQVVFQQLRVLPNIKHFH*SLVQEN
Trigger: GTTCTCTTGTACCAAGGATCAGTGAAAGTGTTTTAT...GTTTGGGAGAACACGTAACTGTTGAAAAACTACCTGGGAGGAGTGAGTTCCTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR GCA 90 bp CCCCATAGGCACAGCATCTTTCAGCAACTTTTGACGCATTGTACTGACTTCCAGATGGTCAAATCAGGTTaGTTTGTCCAGGTTTTAGAA +
Preference number: 4 (lower is better)
Translates to: PHRHSIFQQLLTHCTDFQMVKSG*FVQVLE
Trigger: TTCTAAAACCTGGACAAAGCAACCTGATTTGACCAT...CTGGAAGTCAGTACAATGCGTCAAAAGTTGCTGAAAGATGCTGTGCCTATGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
CDS-3UTR GCA 90 bp CCCCATAGGCACAGCATCTTTCAGCAACTTTTGACGCATTGTACTGACTTCCAGTTTCTTTTTCATAGCTaGATAGCAGCCGATCTTTCT +
Preference number: 4 (lower is better)
Translates to: PHRHSIFQQLLTHCTDFQFLFHS*IAADLS
Trigger: AGAAAGATCGGCTGCTATGCAGCTATGAAAAAGAAA...CTGGAAGTCAGTACAATGCGTCAAAAGTTGCTGAAAGATGCTGTGCCTATGGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
CDS-3UTR GCA 90 bp CAAGTGCAGTGGAAAAGCAGTCTTGGCATGTTTGGATATGTTGATTTGCATATAGGAGCTATGTTATGGTaGTCTTGGGTCAGGATCTCG +
Preference number: 4 (lower is better)
Translates to: QVQWKSSLGMFGYVDLHIGAMLW*SWVRIS
Trigger: CGAGATCCTGACCCAAGAGCACCATAACATAGCTCC...TATATGCAAATCAACATATCCAAACATGCCAAGACTGCTTTTCCACTGCACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
CDS-3UTR GCA 90 bp CATAATTTGTCTAAAACTCTCACTAGTGAATGCCACTGGGAAACTTCTATTACACTGAGGCAGGATGATTaGTTGAACCCAGGAGGCGGA +
Preference number: 4 (lower is better)
Translates to: HNLSKTLTSECHWETSITLRQDD*LNPGGG
Trigger: TCCGCCTCCTGGGTTCAAGCAATCATCCTGCCTCAG...TGTAATAGAAGTTTCCCAGTGGCATTCACTAGTGAGAGTTTTAGACAAATTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CCA 90 bp TTTTTCAACAGTTACGTGTTCTCCCAAACAAGAGCTAAAGCTCAAGTTTGTAAGGTCGGATGGAAGGAGTaGTTTAGTGTGGTGCCAGGT +
Preference number: 4 (lower is better)
Translates to: FFNSYVFSQTRAKAQVCKVGWKE*FSVVPG
Trigger: ACCTGGCACCACACTAAACCACTCCTTCCATCCGAC...CTTACAAACTTGAGCTTTAGCTCTTGTTTGGGAGAACACGTAACTGTTGAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
CDS-3UTR CCA 90 bp ACAGTCCAATCTAACATTTTAGGCACAAACCTTAATTTGTTGGGCAGGGTTAGGTTCGGAGCTATGTTATaGTGCTCTTGGGTCAGGATC +
Preference number: 4 (lower is better)
Translates to: TVQSNILGTNLNLLGRVRFGAML*CSWVRI
Trigger: GATCCTGACCCAAGAGCACCATAACATAGCTCCGAA...CCTAACCCTGCCCAACAAATTAAGGTTTGTGCCTAAAATGTTAGATTGGACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
CDS-3UTR CCA 90 bp CCCCATAGGCACAGCATCTTTCAGCAACTTTTGACGCATTGTACTGACTTCCAGACTAGTGAATGCCACTaGGAAACTTCTATTACAAAG +
Preference number: 4 (lower is better)
Translates to: PHRHSIFQQLLTHCTDFQTSECH*ETSITK
Trigger: CTTTGTAATAGAAGTTTCCCAGTGGCATTCACTAGT...CTGGAAGTCAGTACAATGCGTCAAAAGTTGCTGAAAGATGCTGTGCCTATGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
CDS-3UTR CCA 90 bp GGAGGAACTCACTCCTCCCAGGTAGTTTTTCAACAGTTACGTGTTCTCCCAAACATCTTCTGGCTAAAATaGAGAGTTAATGTACCACAC +
Preference number: 4 (lower is better)
Translates to: GGTHSSQVVFQQLRVLPNIFWLK*RVNVPH
Trigger: GTGTGGTACATTAACTCTCCATTTTAGCCAGAAGAT...GTTTGGGAGAACACGTAACTGTTGAAAAACTACCTGGGAGGAGTGAGTTCCTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
CDS-3UTR CCA 90 bp CCCCATAGGCACAGCATCTTTCAGCAACTTTTGACGCATTGTACTGACTTCCAGGATCGTGGCTTTAACTaGATGTCAGTTACTGTTTTA +
Preference number: 4 (lower is better)
Translates to: PHRHSIFQQLLTHCTDFQDRGFN*MSVTVL
Trigger: TAAAACAGTAACTGACATCCAGTTAAAGCCACGATC...CTGGAAGTCAGTACAATGCGTCAAAAGTTGCTGAAAGATGCTGTGCCTATGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
CDS-3UTR CCA 90 bp GGAGGAACTCACTCCTCCCAGGTAGTTTTTCAACAGTTACGTGTTCTCCCAAACGATCGTGGCTTTAACTaGATGTCAGTTACTGTTTTA +
Preference number: 4 (lower is better)
Translates to: GGTHSSQVVFQQLRVLPNDRGFN*MSVTVL
Trigger: TAAAACAGTAACTGACATCCAGTTAAAGCCACGATC...GTTTGGGAGAACACGTAACTGTTGAAAAACTACCTGGGAGGAGTGAGTTCCTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
CDS-3UTR CCA 90 bp CAAGTGCAGTGGAAAAGCAGTCTTGGCATGTTTGGATATGTTGATTTGCATATATTCTCACTGACTTCCTaGACTCCAGTGCTCAGTGAG +
Preference number: 4 (lower is better)
Translates to: QVQWKSSLGMFGYVDLHIFSLTS*TPVLSE
Trigger: CTCACTGAGCACTGGAGTCCAGGAAGTCAGTGAGAA...TATATGCAAATCAACATATCCAAACATGCCAAGACTGCTTTTCCACTGCACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CCA 90 bp AGATCTCCACACTGTCACTACGAAAATGTGCAGACAACAGCTGACTGGTACACAGATAATCCAAAGACCTaGCTTCTGCTTTTGGTTCTT +
Preference number: 4 (lower is better)
Translates to: RSPHCHYENVQTTADWYTDNPKT*LLLLVL
Trigger: AAGAACCAAAAGCAGAAGCCAGGTCTTTGGATTATC...TGTGTACCAGTCAGCTGTTGTCTGCACATTTTCGTAGTGACAGTGTGGAGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CCA 90 bp GCAGTCAGACATGAGTTCCCTTCAGGGAAAATGCACCTTAGTATTTTAACTTTGATTAGCTGGGCATACTaGTGTGCACTTGTAGTCCCA +
Preference number: 4 (lower is better)
Translates to: AVRHEFPSGKMHLSILTLISWAY*CALVVP
Trigger: TGGGACTACAAGTGCACACCAGTATGCCCAGCTAAT...CAAAGTTAAAATACTAAGGTGCATTTTCCCTGAAGGGAACTCATGTCTGACTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CCA 90 bp ACTTCTTTACTTCTTAAGCTGATGATACCCTTTTGCCCGCCCCATGTACCAGATTACACACCCCAACAGTaGCTGCAAAGATTGTTCAAA +
Preference number: 4 (lower is better)
Translates to: TSLLLKLMIPFCPPHVPDYTPQQ*LQRLFK
Trigger: TTTGAACAATCTTTGCAGCCACTGTTGGGGTGTGTA...ATCTGGTACATGGGGCGGGCAAAAGGGTATCATCAGCTTAAGAAGTAAAGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CCA 90 bp CACTGGGAAACTTCTATTACAAAGACTAGATTCTTAACACAGATTCGCATTCTATCACTTCCAGGCTGCTaGTACACACCCCAACAGTGG +
Preference number: 4 (lower is better)
Translates to: HWETSITKTRFLTQIRILSLPGC*YTPQQW
Trigger: CCACTGTTGGGGTGTGTACCAGCAGCCTGGAAGTGA...TAGAATGCGAATCTGTGTTAAGAATCTAGTCTTTGTAATAGAAGTTTCCCAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR CAA 72 bp CTGATAATCCAAAGACCTGGCTTCTGCTTTTGGTTCTaGCTCCTCCCTAAAGTGAGAAATGAAGCCATATCT +
Preference number: 4 (lower is better)
Translates to: LIIQRPGFCFWF*LLPKVRNEAIS
Trigger: AGATATGGCTTCATTTCTCACTTTAGGGAGGAGCAAGAACCAAAAGCAGAAGCCAGGTCTTTGGATTATCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR CAA 72 bp CAAATACTGGGTCAGATGACAGATAGACACATTTTCTaGTCTGATGCTAACAAGAATGGAAATCGAGCCCCC +
Preference number: 4 (lower is better)
Translates to: QILGQMTDRHIF*SDANKNGNRAP
Trigger: GGGGGCTCGATTTCCATTCTTGTTAGCATCAGACAAGAAAATGTGTCTATCTGTCATCTGACCCAGTATTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR TCA 90 bp TTTGCTTTCATTAAAAAGATCTCCACACTGTCACTACGAAAATGTGCAGACAACCTGACGTCTCGGAAATaGGTCTCCAGGTATTCTGTG +
Preference number: 4 (lower is better)
Translates to: FAFIKKISTLSLRKCADNLTSRK*VSRYSV
Trigger: CACAGAATACCTGGAGACTCATTTCCGAGACGTCAG...GTTGTCTGCACATTTTCGTAGTGACAGTGTGGAGATCTTTTTAATGAAAGCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
CDS-3UTR TCA 90 bp CAAGTGCAGTGGAAAAGCAGTCTTGGCATGTTTGGATATGTTGATTTGCATATAAGCAGCCGATCTTTCTaGCCATGGTCAAATCAGGTT +
Preference number: 4 (lower is better)
Translates to: QVQWKSSLGMFGYVDLHISSRSF*PWSNQV
Trigger: AACCTGATTTGACCATGGTCAGAAAGATCGGCTGCT...TATATGCAAATCAACATATCCAAACATGCCAAGACTGCTTTTCCACTGCACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
CDS-3UTR TCA 90 bp ATAGATCCACCTTTTAAACTCATCATGGTAGAACTCGGACTTGCAAGTTACCATAGCAGCCGATCTTTCTaGCCATGGTCAAATCAGGTT +
Preference number: 4 (lower is better)
Translates to: IDPPFKLIMVELGLASYHSSRSF*PWSNQV
Trigger: AACCTGATTTGACCATGGTCAGAAAGATCGGCTGCT...ATGGTAACTTGCAAGTCCGAGTTCTACCATGATGAGTTTAAAAGGTGGATCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000650388.1
CDS-3UTR TCA 90 bp GCAGTCAGACATGAGTTCCCTTCAGGGAAAATGCACCTTAGTATTTTAACTTTGATGCGTGACGTGTCTTaGTCTAAGTCAACACAGAAG +
Preference number: 4 (lower is better)
Translates to: AVRHEFPSGKMHLSILTLMRDVS*SKSTQK
Trigger: CTTCTGTGTTGACTTAGATCAAGACACGTCACGCAT...CAAAGTTAAAATACTAAGGTGCATTTTCCCTGAAGGGAACTCATGTCTGACTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
CDS-3UTR TCA 90 bp CATAATTTGTCTAAAACTCTCACTAGTGAATGCCACTGGGAAACTTCTATTACACATACCGGAGGAAGGTaGGGGATGTTCCACAGATAC +
Preference number: 4 (lower is better)
Translates to: HNLSKTLTSECHWETSITHTGGR*GMFHRY
Trigger: GTATCTGTGGAACATCCCTCACCTTCCTCCGGTATG...TGTAATAGAAGTTTCCCAGTGGCATTCACTAGTGAGAGTTTTAGACAAATTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR TCA 90 bp CACTGGGAAACTTCTATTACAAAGACTAGATTCTTAACACAGATTCGCATTCTAGTCAGTCTCATGTCCTaGGCTAAGTCAACAGGGTGC +
Preference number: 4 (lower is better)
Translates to: HWETSITKTRFLTQIRILVSLMS*AKSTGC
Trigger: GCACCCTGTTGACTTAGCTCAGGACATGAGACTGAC...TAGAATGCGAATCTGTGTTAAGAATCTAGTCTTTGTAATAGAAGTTTCCCAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR TCA 90 bp TTTTTCAACAGTTACGTGTTCTCCCAAACAAGAGCTAAAGCTCAAGTTTGTAAGTGCAAAGAGCAGCCCTaGATTTGGGAGGGTCAAATC +
Preference number: 4 (lower is better)
Translates to: FFNSYVFSQTRAKAQVCKCKEQP*IWEGQI
Trigger: GATTTGACCCTCCCAAATTCAGGGCTGCTCTTTGCA...CTTACAAACTTGAGCTTTAGCTCTTGTTTGGGAGAACACGTAACTGTTGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR TCA 90 bp CAGCTGCTGAATGCCAAGGTACTGTTCTGTACAGGACATTTCACCAAAGCAAATACAGGATGTGAGACGTaGCATTTCAATGAAATCAAC +
Preference number: 4 (lower is better)
Translates to: QLLNAKVLFCTGHFTKANTGCET*HFNEIN
Trigger: GTTGATTTCATTGAAATGTCACGTCTCACATCCTGT...ATTTGCTTTGGTGAAATGTCCTGTACAGAACAGTACCTTGGCATTCAGCAGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR GCA 90 bp GAACCCCATAGGCACAGCATCTTTCAGCAACTTTTGACGCATTGTACTGACTTCTTTCTTTTTCATAGCTaGATAGCAGCCGATCTTTCT +
Preference number: 4 (lower is better)
Translates to: EPHRHSIFQQLLTHCTDFFLFHS*IAADLS
Trigger: AGAAAGATCGGCTGCTATGCAGCTATGAAAAAGAAA...GAAGTCAGTACAATGCGTCAAAAGTTGCTGAAAGATGCTGTGCCTATGGGGTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
CDS-3UTR GCA 90 bp GGAGGAACTCACTCCTCCCAGGTAGTTTTTCAACAGTTACGTGTTCTCCCAAACAAACAAGACTTTGTGTaGTTTCAGACAGGTTATATG +
Preference number: 4 (lower is better)
Translates to: GGTHSSQVVFQQLRVLPNKQDFV*FQTGYM
Trigger: CATATAACCTGTCTGAAAGCACACAAAGTCTTGTTT...GTTTGGGAGAACACGTAACTGTTGAAAAACTACCTGGGAGGAGTGAGTTCCTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
CDS-3UTR GCA 90 bp AGATCTCCACACTGTCACTACGAAAATGTGCAGACAACAGCTGACTGGTACACACAACATACCCCCAAATaGTCCTTTTTGGTTGTTATA +
Preference number: 4 (lower is better)
Translates to: RSPHCHYENVQTTADWYTQHTPK*SFLVVI
Trigger: TATAACAACCAAAAAGGAGCATTTGGGGGTATGTTG...TGTGTACCAGTCAGCTGTTGTCTGCACATTTTCGTAGTGACAGTGTGGAGATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR GCA 90 bp GCAGTCAGACATGAGTTCCCTTCAGGGAAAATGCACCTTAGTATTTTAACTTTGTTTGCTACACTCAGCTaGTCTCTTCTCACTGACTTC +
Preference number: 4 (lower is better)
Translates to: AVRHEFPSGKMHLSILTLFATLS*SLLTDF
Trigger: GAAGTCAGTGAGAAGAGAGCAGCTGAGTGTAGCAAA...CAAAGTTAAAATACTAAGGTGCATTTTCCCTGAAGGGAACTCATGTCTGACTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR GCA 90 bp CAAGTGCAGTGGAAAAGCAGTCTTGGCATGTTTGGATATGTTGATTTGCATATAACAGTTCCTAGTGGGTaGTCATCAGACATGTGTTGG +
Preference number: 4 (lower is better)
Translates to: QVQWKSSLGMFGYVDLHITVPSG*SSDMCW
Trigger: CCAACACATGTCTGATGAGCACCCACTAGGAACTGT...TATATGCAAATCAACATATCCAAACATGCCAAGACTGCTTTTCCACTGCACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR GCA 90 bp TTTAATCCTGCTGAAGAAGAGAAACGCGAACACCAAGTAAAACTTACTATAAACCTGGGCATACTGGTGTaGACTTGTAGTCCCAGCTAC +
Preference number: 4 (lower is better)
Translates to: FNPAEEEKREHQVKLTINLGILV*TCSPSY
Trigger: GTAGCTGGGACTACAAGTGCACACCAGTATGCCCAG...GTTTATAGTAAGTTTTACTTGGTGTTCGCGTTTCTCTTCTTCAGCAGGATTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR GCA 90 bp CAAGTGCAGTGGAAAAGCAGTCTTGGCATGTTTGGATATGTTGATTTGCATATACCAAAGATCCGTTCTTaGCAACACTGTCTGAACCTG +
Preference number: 4 (lower is better)
Translates to: QVQWKSSLGMFGYVDLHIPKIRS*QHCLNL
Trigger: CAGGTTCAGACAGTGTTGGCAAGAACGGATCTTTGG...TATATGCAAATCAACATATCCAAACATGCCAAGACTGCTTTTCCACTGCACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CCA 90 bp GAACCCCATAGGCACAGCATCTTTCAGCAACTTTTGACGCATTGTACTGACTTCTGCTTATTTTCATCTTaGCCCCCGAATACAAACAAA +
Preference number: 4 (lower is better)
Translates to: EPHRHSIFQQLLTHCTDFCLFSS*PPNTNK
Trigger: TTTGTTTGTATTCGGGGGCCAAGATGAAAATAAGCA...GAAGTCAGTACAATGCGTCAAAAGTTGCTGAAAGATGCTGTGCCTATGGGGTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
CDS-3UTR CCA 90 bp ATGGTTCATTCAGCATCTGTTCCCGTAAATAACTGGAGTCCAACCCTGAAACCCTGCTTATTTTCATCTTaGCCCCCGAATACAAACAAA +
Preference number: 4 (lower is better)
Translates to: MVHSASVPVNNWSPTLKPCLFSS*PPNTNK
Trigger: TTTGTTTGTATTCGGGGGCCAAGATGAAAATAAGCA...GGGTTTCAGGGTTGGACTCCAGTTATTTACGGGAACAGATGCTGAATGAACCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000650388.1
CDS-3UTR CCA 90 bp TTTAATCCTGCTGAAGAAGAGAAACGCGAACACCAAGTAAAACTTACTATAAACACGGCGAAGGTCGGATaGAAGGAGTGGTTTAGTGTG +
Preference number: 4 (lower is better)
Translates to: FNPAEEEKREHQVKLTINTAKVG*KEWFSV
Trigger: CACACTAAACCACTCCTTCCATCCGACCTTCGCCGT...GTTTATAGTAAGTTTTACTTGGTGTTCGCGTTTCTCTTCTTCAGCAGGATTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CCA 90 bp GAACCCCATAGGCACAGCATCTTTCAGCAACTTTTGACGCATTGTACTGACTTCAGTACTAGGAATAAATaGAGACTAACTGGCATACAG +
Preference number: 4 (lower is better)
Translates to: EPHRHSIFQQLLTHCTDFSTRNK*RLTGIQ
Trigger: CTGTATGCCAGTTAGTCTCCATTTATTCCTAGTACT...GAAGTCAGTACAATGCGTCAAAAGTTGCTGAAAGATGCTGTGCCTATGGGGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
CDS-3UTR CCA 90 bp CATAATTTGTCTAAAACTCTCACTAGTGAATGCCACTGGGAAACTTCTATTACAGTTCAGCTCCCAGGATaGCAAGCACAGTTCCTAGTG +
Preference number: 4 (lower is better)
Translates to: HNLSKTLTSECHWETSITVQLPG*QAQFLV
Trigger: CACTAGGAACTGTGCTTGCCATCCTGGGAGCTGAAC...TGTAATAGAAGTTTCCCAGTGGCATTCACTAGTGAGAGTTTTAGACAAATTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CCA 90 bp CATAATTTGTCTAAAACTCTCACTAGTGAATGCCACTGGGAAACTTCTATTACACCTCCAAGATTACCCTaGTACAATGGGGAGAGTGCC +
Preference number: 4 (lower is better)
Translates to: HNLSKTLTSECHWETSITPPRLP*YNGESA
Trigger: GGCACTCTCCCCATTGTACCAGGGTAATCTTGGAGG...TGTAATAGAAGTTTCCCAGTGGCATTCACTAGTGAGAGTTTTAGACAAATTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CCA 90 bp GCAGTCAGACATGAGTTCCCTTCAGGGAAAATGCACCTTAGTATTTTAACTTTGGGCCGTTCATTTACGTaGATCCTATTCAGTGTCTAC +
Preference number: 4 (lower is better)
Translates to: AVRHEFPSGKMHLSILTLGRSFT*ILFSVY
Trigger: GTAGACACTGAATAGGATCCACGTAAATGAACGGCC...CAAAGTTAAAATACTAAGGTGCATTTTCCCTGAAGGGAACTCATGTCTGACTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CCA 90 bp AGATCTCCACACTGTCACTACGAAAATGTGCAGACAACAGCTGACTGGTACACAGTGAATGATTTGAAATaGCCGTTCATTTACGTGGAT +
Preference number: 4 (lower is better)
Translates to: RSPHCHYENVQTTADWYTVNDLK*PFIYVD
Trigger: ATCCACGTAAATGAACGGCCATTTCAAATCATTCAC...TGTGTACCAGTCAGCTGTTGTCTGCACATTTTCGTAGTGACAGTGTGGAGATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CCA 90 bp AGATCTCCACACTGTCACTACGAAAATGTGCAGACAACAGCTGACTGGTACACAAAACTTGGCTATACTTaGTACAACTTAAGCACCAGA +
Preference number: 4 (lower is better)
Translates to: RSPHCHYENVQTTADWYTKLGYT*YNLSTR
Trigger: TCTGGTGCTTAAGTTGTACCAAGTATAGCCAAGTTT...TGTGTACCAGTCAGCTGTTGTCTGCACATTTTCGTAGTGACAGTGTGGAGATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CCA 90 bp TTTAATCCTGCTGAAGAAGAGAAACGCGAACACCAAGTAAAACTTACTATAAACTTTTGTCAGCTCTGCTaGTCACTTCCAGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: FNPAEEEKREHQVKLTINFCQLC*SLPGCW
Trigger: CCAGCAGCCTGGAAGTGACCAGCAGAGCTGACAAAA...GTTTATAGTAAGTTTTACTTGGTGTTCGCGTTTCTCTTCTTCAGCAGGATTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR CAA 72 bp GCCTGCTTCCAAGCTTTTGTTAAAGAACAGAATGTGTaGAATTCTTCTCAATTGGCAGGGGATCAAGCACAA +
Preference number: 4 (lower is better)
Translates to: ACFQAFVKEQNV*NSSQLAGDQAQ
Trigger: TTGTGCTTGATCCCCTGCCAATTGAGAAGAATTCAACACATTCTGTTCTTTAACAAAAGCTTGGAAGCAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR CAA 72 bp TCATGTCCTGAGCTAAGTCAACAGGGTGCTAACAGATaGTCATTGGAGGAGAAGCTTTGTCATTCTACTATT +
Preference number: 4 (lower is better)
Translates to: SCPELSQQGANR*SLEEKLCHSTI
Trigger: AATAGTAGAATGACAAAGCTTCTCCTCCAATGACAATCTGTTAGCACCCTGTTGACTTAGCTCAGGACATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR TCA 90 bp TTTAATCCTGCTGAAGAAGAGAAACGCGAACACCAAGTAAAACTTACTATAAACCTGACGTCTCGGAAATaGGTCTCCAGGTATTCTGTG +
Preference number: 4 (lower is better)
Translates to: FNPAEEEKREHQVKLTINLTSRK*VSRYSV
Trigger: CACAGAATACCTGGAGACTCATTTCCGAGACGTCAG...GTTTATAGTAAGTTTTACTTGGTGTTCGCGTTTCTCTTCTTCAGCAGGATTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR TCA 90 bp TTCATAGGTGGCAATGCTGTCCATGTATTTGCATCTGGATCATACTTTTCTCCTCCAAAGCTACGTATTTaGATACAGCAGTCAGACATG +
Preference number: 4 (lower is better)
Translates to: FIGGNAVHVFASGSYFSPPKLRI*IQQSDM
Trigger: CATGTCTGACTGCTGTATTCAAATACGTAGCTTTGG...AGGAGAAAAGTATGATCCAGATGCAAATACATGGACAGCATTGCCACCTATGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648349.2
CDS-3UTR TCA 90 bp ACAGTCCAATCTAACATTTTAGGCACAAACCTTAATTTGTTGGGCAGGGTTAGGCCAAAGCTACGTATTTaGATACAGCAGTCAGACATG +
Preference number: 4 (lower is better)
Translates to: TVQSNILGTNLNLLGRVRPKLRI*IQQSDM
Trigger: CATGTCTGACTGCTGTATTCAAATACGTAGCTTTGG...CCTAACCCTGCCCAACAAATTAAGGTTTGTGCCTAAAATGTTAGATTGGACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
CDS-3UTR TCA 90 bp ACAGTCCAATCTAACATTTTAGGCACAAACCTTAATTTGTTGGGCAGGGTTAGGTCTTTCAGCAACTTTTaGCGCATTGTACTGACTTCC +
Preference number: 4 (lower is better)
Translates to: TVQSNILGTNLNLLGRVRSFSNF*RIVLTS
Trigger: GGAAGTCAGTACAATGCGTCAAAAGTTGCTGAAAGA...CCTAACCCTGCCCAACAAATTAAGGTTTGTGCCTAAAATGTTAGATTGGACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
CDS-3UTR TCA 90 bp GCAGTCAGACATGAGTTCCCTTCAGGGAAAATGCACCTTAGTATTTTAACTTTGAAATGTCTCATGTCCTaGGCTAAGTCAGTCTCATGT +
Preference number: 4 (lower is better)
Translates to: AVRHEFPSGKMHLSILTLKCLMS*AKSVSC
Trigger: ACATGAGACTGACTTAGCTCAGGACATGAGACATTT...CAAAGTTAAAATACTAAGGTGCATTTTCCCTGAAGGGAACTCATGTCTGACTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR GCA 90 bp CACTGGGAAACTTCTATTACAAAGACTAGATTCTTAACACAGATTCGCATTCTAGGAGCTATGTTATGGTaGTCTTGGGTCAGGATCTCG +
Preference number: 4 (lower is better)
Translates to: HWETSITKTRFLTQIRILGAMLW*SWVRIS
Trigger: CGAGATCCTGACCCAAGAGCACCATAACATAGCTCC...TAGAATGCGAATCTGTGTTAAGAATCTAGTCTTTGTAATAGAAGTTTCCCAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
CDS-3UTR GCA 90 bp CAAGTGCAGTGGAAAAGCAGTCTTGGCATGTTTGGATATGTTGATTTGCATATACAGTCACTCTTGGAGTaGCCTTTTCAACAGAAGAAC +
Preference number: 4 (lower is better)
Translates to: QVQWKSSLGMFGYVDLHIQSLLE*PFQQKN
Trigger: GTTCTTCTGTTGAAAAGGGCACTCCAAGAGTGACTG...TATATGCAAATCAACATATCCAAACATGCCAAGACTGCTTTTCCACTGCACTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR GCA 90 bp ACTTCTTTACTTCTTAAGCTGATGATACCCTTTTGCCCGCCCCATGTACCAGATACTTGGCATTGTTTATaGTATACTAGTTTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: TSLLLKLMIPFCPPHVPDTWHCL*YTSFSS
Trigger: GGAGCTGAAACTAGTATAGCATAAACAATGCCAAGT...ATCTGGTACATGGGGCGGGCAAAAGGGTATCATCAGCTTAAGAAGTAAAGAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR GCA 90 bp ACTTCTTTACTTCTTAAGCTGATGATACCCTTTTGCCCGCCCCATGTACCAGATTTTTCTTTCAATGTGTaGACAGAAGGAAGCTCAACA +
Preference number: 4 (lower is better)
Translates to: TSLLLKLMIPFCPPHVPDFSFNV*TEGSST
Trigger: TGTTGAGCTTCCTTCTGTGCACACATTGAAAGAAAA...ATCTGGTACATGGGGCGGGCAAAAGGGTATCATCAGCTTAAGAAGTAAAGAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR GCA 90 bp ACTTCTTTACTTCTTAAGCTGATGATACCCTTTTGCCCGCCCCATGTACCAGATTACAATTTTACAAGTTaGAGCCTTCTAGCACTTCCA +
Preference number: 4 (lower is better)
Translates to: TSLLLKLMIPFCPPHVPDYNFTS*SLLALP
Trigger: TGGAAGTGCTAGAAGGCTGCAACTTGTAAAATTGTA...ATCTGGTACATGGGGCGGGCAAAAGGGTATCATCAGCTTAAGAAGTAAAGAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CCA 90 bp AGATCTCCACACTGTCACTACGAAAATGTGCAGACAACAGCTGACTGGTACACAAGTAAAATAACAGTTTaGCACTTAGCAGCTTTGTTG +
Preference number: 4 (lower is better)
Translates to: RSPHCHYENVQTTADWYTSKITV*HLAALL
Trigger: CAACAAAGCTGCTAAGTGCCAAACTGTTATTTTACT...TGTGTACCAGTCAGCTGTTGTCTGCACATTTTCGTAGTGACAGTGTGGAGATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CCA 90 bp CAGCTGCTGAATGCCAAGGTACTGTTCTGTACAGGACATTTCACCAAAGCAAATGAGAACAATCAAGGCTaGTTCAAACGAAAGGTTATT +
Preference number: 4 (lower is better)
Translates to: QLLNAKVLFCTGHFTKANENNQG*FKRKVI
Trigger: AATAACCTTTCGTTTGAACCAGCCTTGATTGTTCTC...ATTTGCTTTGGTGAAATGTCCTGTACAGAACAGTACCTTGGCATTCAGCAGCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR TCA 90 bp ACAGTCCAATCTAACATTTTAGGCACAAACCTTAATTTGTTGGGCAGGGTTAGGCAAAAATCCTTCTGCTaGGAGAACTCCATGGTTAAT +
Preference number: 4 (lower is better)
Translates to: TVQSNILGTNLNLLGRVRQKSFC*ENSMVN
Trigger: ATTAACCATGGAGTTCTCTCAGCAGAAGGATTTTTG...CCTAACCCTGCCCAACAAATTAAGGTTTGTGCCTAAAATGTTAGATTGGACTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
CDS-3UTR TCA 90 bp GCAGTCAGACATGAGTTCCCTTCAGGGAAAATGCACCTTAGTATTTTAACTTTGGTGGGAGAACGTAAGTaGTGTTTTTCATATGCATGT +
Preference number: 4 (lower is better)
Translates to: AVRHEFPSGKMHLSILTLVGERK*CFSYAC
Trigger: ACATGCATATGAAAAACATCACTTACGTTCTCCCAC...CAAAGTTAAAATACTAAGGTGCATTTTCCCTGAAGGGAACTCATGTCTGACTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
CDS-3UTR TCA 90 bp CACTGGGAAACTTCTATTACAAAGACTAGATTCTTAACACAGATTCGCATTCTAAGGCCTCTTGAATCATaGACGCCAACATTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: HWETSITKTRFLTQIRILRPLES*TPTFWK
Trigger: CTTCCAGAATGTTGGCGTTCATGATTCAAGAGGCCT...TAGAATGCGAATCTGTGTTAAGAATCTAGTCTTTGTAATAGAAGTTTCCCAGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR TCA 90 bp TTTTTCAACAGTTACGTGTTCTCCCAAACAAGAGCTAAAGCTCAAGTTTGTAAGAAGGTTATTCACCAGTaGAAGAAACGGGGAGAAGAC +
Preference number: 4 (lower is better)
Translates to: FFNSYVFSQTRAKAQVCKKVIHQ*KKRGED
Trigger: GTCTTCTCCCCGTTTCTTTCACTGGTGAATAACCTT...CTTACAAACTTGAGCTTTAGCTCTTGTTTGGGAGAACACGTAACTGTTGAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR TCA 90 bp TTTTTCAACAGTTACGTGTTCTCCCAAACAAGAGCTAAAGCTCAAGTTTGTAAGCTATCCCAAGAAGAGTaGGTAAAAACAACGACTCCG +
Preference number: 4 (lower is better)
Translates to: FFNSYVFSQTRAKAQVCKLSQEE*VKTTTP
Trigger: CGGAGTCGTTGTTTTTACTCACTCTTCTTGGGATAG...CTTACAAACTTGAGCTTTAGCTCTTGTTTGGGAGAACACGTAACTGTTGAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR TCA 90 bp ACAGTCCAATCTAACATTTTAGGCACAAACCTTAATTTGTTGGGCAGGGTTAGGTCTCTACTATCCTACTaGACTTGGGGAGTACAATTT +
Preference number: 4 (lower is better)
Translates to: TVQSNILGTNLNLLGRVRSLLSY*TWGVQF
Trigger: AAATTGTACTCCCCAAGTTCAGTAGGATAGTAGAGA...CCTAACCCTGCCCAACAAATTAAGGTTTGTGCCTAAAATGTTAGATTGGACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR GCA 90 bp TGTCCAGGTTTTAGAATAAATATCGTAACACTCCATGGAAATCAGCTCCTTTTCTCCGAAGTTATGTCTTaGCTCGTTCATAGGTGGCAA +
Preference number: 4 (lower is better)
Translates to: CPGFRINIVTLHGNQLLFSEVMS*LVHRWQ
Trigger: TTGCCACCTATGAACGAGGCAAGACATAACTTCGGA...GAAAAGGAGCTGATTTCCATGGAGTGTTACGATATTTATTCTAAAACCTGGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000650388.1
CDS-3UTR GCA 90 bp TTTAATCCTGCTGAAGAAGAGAAACGCGAACACCAAGTAAAACTTACTATAAACAGAGTGAGTTTCAGCTaGCATCTCTGCTCTCCCTTT +
Preference number: 4 (lower is better)
Translates to: FNPAEEEKREHQVKLTINRVSFS*HLCSPF
Trigger: AAAGGGAGAGCAGAGATGGCAGCTGAAACTCACTCT...GTTTATAGTAAGTTTTACTTGGTGTTCGCGTTTCTCTTCTTCAGCAGGATTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR GCA 90 bp GCAGTCAGACATGAGTTCCCTTCAGGGAAAATGCACCTTAGTATTTTAACTTTGCACTATGAAGAGTATTaGAGATCTAACACCCAACAC +
Preference number: 4 (lower is better)
Translates to: AVRHEFPSGKMHLSILTLHYEEY*RSNTQH
Trigger: GTGTTGGGTGTTAGATCTGCAATACTCTTCATAGTG...CAAAGTTAAAATACTAAGGTGCATTTTCCCTGAAGGGAACTCATGTCTGACTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CCA 90 bp TGTCCAGGTTTTAGAATAAATATCGTAACACTCCATGGAAATCAGCTCCTTTTCGCTGAGAGAACTCCATaGTTAATTCTCGGCATGCTT +
Preference number: 4 (lower is better)
Translates to: CPGFRINIVTLHGNQLLFAERTP*LILGML
Trigger: AAGCATGCCGAGAATTAACCATGGAGTTCTCTCAGC...GAAAAGGAGCTGATTTCCATGGAGTGTTACGATATTTATTCTAAAACCTGGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000650388.1
CDS-3UTR CCA 90 bp TTTGCTTTCATTAAAAAGATCTCCACACTGTCACTACGAAAATGTGCAGACAACGCTGAGAGAACTCCATaGTTAATTCTCGGCATGCTT +
Preference number: 4 (lower is better)
Translates to: FAFIKKISTLSLRKCADNAERTP*LILGML
Trigger: AAGCATGCCGAGAATTAACCATGGAGTTCTCTCAGC...GTTGTCTGCACATTTTCGTAGTGACAGTGTGGAGATCTTTTTAATGAAAGCAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
CDS-3UTR CCA 90 bp TTTTTCAACAGTTACGTGTTCTCCCAAACAAGAGCTAAAGCTCAAGTTTGTAAGAGGAGCCTCCACCCATaGCGTAGATTTTCTTTTTCA +
Preference number: 4 (lower is better)
Translates to: FFNSYVFSQTRAKAQVCKRSLHP*RRFSFS
Trigger: TGAAAAAGAAAATCTACGCCATGGGTGGAGGCTCCT...CTTACAAACTTGAGCTTTAGCTCTTGTTTGGGAGAACACGTAACTGTTGAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
CDS-3UTR CCA 90 bp TTTGCTTTCATTAAAAAGATCTCCACACTGTCACTACGAAAATGTGCAGACAACAGAAGTGGGGTAAAGTaGGTTGAGGTGAGAATGAGA +
Preference number: 4 (lower is better)
Translates to: FAFIKKISTLSLRKCADNRSGVK*VEVRMR
Trigger: TCTCATTCTCACCTCAACCCACTTTACCCCACTTCT...GTTGTCTGCACATTTTCGTAGTGACAGTGTGGAGATCTTTTTAATGAAAGCAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
3UTR CAA 72 bp CATATACGGATTTTGTTTGTTACCAAAGCTACGTATTaGAATACAGCAGTCAGACATGAGTTCCCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: HIRILFVTKATY*NTAVRHEFPSG
Trigger: CCCTGAAGGGAACTCATGTCTGACTGCTGTATTCAAATACGTAGCTTTGGTAACAAACAAAATCCGTATATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
CDS-3UTR TCA 90 bp CTGAGCGGTATATTGCTACACTCTTTGACAATTTCTCGTACTAATGGTTCATTCGTGGGAGAACGTAAGTaGTGTTTTTCATATGCATGT +
Preference number: 4 (lower is better)
Translates to: LSGILLHSLTISRTNGSFVGERK*CFSYAC
Trigger: ACATGCATATGAAAAACATCACTTACGTTCTCCCAC...GAATGAACCATTAGTACGAGAAATTGTCAAAGAGTGTAGCAATATACCGCTCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648349.2
CDS-3UTR TCA 90 bp TTTGCTTTCATTAAAAAGATCTCCACACTGTCACTACGAAAATGTGCAGACAACTTTGACGCATTGTACTaGCTTCCAGCAGGTATAAGA +
Preference number: 4 (lower is better)
Translates to: FAFIKKISTLSLRKCADNFDALY*LPAGIR
Trigger: TCTTATACCTGCTGGAAGTCAGTACAATGCGTCAAA...GTTGTCTGCACATTTTCGTAGTGACAGTGTGGAGATCTTTTTAATGAAAGCAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
CDS-3UTR TCA 90 bp TTTTTCAACAGTTACGTGTTCTCCCAAACAAGAGCTAAAGCTCAAGTTTGTAAGTCTTTCAGCAACTTTTaGCGCATTGTACTGACTTCC +
Preference number: 4 (lower is better)
Translates to: FFNSYVFSQTRAKAQVCKSFSNF*RIVLTS
Trigger: GGAAGTCAGTACAATGCGTCAAAAGTTGCTGAAAGA...CTTACAAACTTGAGCTTTAGCTCTTGTTTGGGAGAACACGTAACTGTTGAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
CDS-3UTR TCA 90 bp TTTTTCAACAGTTACGTGTTCTCCCAAACAAGAGCTAAAGCTCAAGTTTGTAAGCGTTTGGGATGTGAATaGTTTGAAATGGCCGTTCAT +
Preference number: 4 (lower is better)
Translates to: FFNSYVFSQTRAKAQVCKRLGCE*FEMAVH
Trigger: ATGAACGGCCATTTCAAATCATTCACATCCCAAACG...CTTACAAACTTGAGCTTTAGCTCTTGTTTGGGAGAACACGTAACTGTTGAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR TCA 90 bp GCAGTCAGACATGAGTTCCCTTCAGGGAAAATGCACCTTAGTATTTTAACTTTGAAGAACAGAATGTGTTaGATTCTTCTCAATTGGCAG +
Preference number: 4 (lower is better)
Translates to: AVRHEFPSGKMHLSILTLKNRMC*ILLNWQ
Trigger: CTGCCAATTGAGAAGAATTCAACACATTCTGTTCTT...CAAAGTTAAAATACTAAGGTGCATTTTCCCTGAAGGGAACTCATGTCTGACTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR TCA 90 bp CATAATTTGTCTAAAACTCTCACTAGTGAATGCCACTGGGAAACTTCTATTACATGTACAACTGTGCCCTaGAACTGGGCCATTATTACA +
Preference number: 4 (lower is better)
Translates to: HNLSKTLTSECHWETSITCTTVP*NWAIIT
Trigger: TGTAATAATGGCCCAGTTTCAGGGCACAGTTGTACA...TGTAATAGAAGTTTCCCAGTGGCATTCACTAGTGAGAGTTTTAGACAAATTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR GCA 90 bp CATAATTTGTCTAAAACTCTCACTAGTGAATGCCACTGGGAAACTTCTATTACAGTCACTACGAAAATGTaGAGACAACAGCTGACTGGT +
Preference number: 4 (lower is better)
Translates to: HNLSKTLTSECHWETSITVTTKM*RQQLTG
Trigger: ACCAGTCAGCTGTTGTCTGCACATTTTCGTAGTGAC...TGTAATAGAAGTTTCCCAGTGGCATTCACTAGTGAGAGTTTTAGACAAATTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
CDS-3UTR GCA 90 bp ACAGTCCAATCTAACATTTTAGGCACAAACCTTAATTTGTTGGGCAGGGTTAGGAGCTTTGTTGGTTATTaGATCCCATATTATGTGGCA +
Preference number: 4 (lower is better)
Translates to: TVQSNILGTNLNLLGRVRSFVGY*IPYYVA
Trigger: TGCCACATAATATGGGATGCAATAACCAACAAAGCT...CCTAACCCTGCCCAACAAATTAAGGTTTGTGCCTAAAATGTTAGATTGGACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR GCA 90 bp CATAATTTGTCTAAAACTCTCACTAGTGAATGCCACTGGGAAACTTCTATTACAAGGCCTCTGACTGCCTaGTTCCAAGCTTTTGTTAAA +
Preference number: 4 (lower is better)
Translates to: HNLSKTLTSECHWETSITRPLTA*FQAFVK
Trigger: TTTAACAAAAGCTTGGAAGCAGGCAGTCAGAGGCCT...TGTAATAGAAGTTTCCCAGTGGCATTCACTAGTGAGAGTTTTAGACAAATTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CCA 90 bp TGTCCAGGTTTTAGAATAAATATCGTAACACTCCATGGAAATCAGCTCCTTTTCGCACGTAGTCGTAATTaGTACCTGTATCAAGATCTC +
Preference number: 4 (lower is better)
Translates to: CPGFRINIVTLHGNQLLFARSRN*YLYQDL
Trigger: GAGATCTTGATACAGGTACCAATTACGACTACGTGC...GAAAAGGAGCTGATTTCCATGGAGTGTTACGATATTTATTCTAAAACCTGGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000650388.1
CDS-3UTR CCA 90 bp CACTGGGAAACTTCTATTACAAAGACTAGATTCTTAACACAGATTCGCATTCTAAGAAGTGGGGTAAAGTaGGTTGAGGTGAGAATGAGA +
Preference number: 4 (lower is better)
Translates to: HWETSITKTRFLTQIRILRSGVK*VEVRMR
Trigger: TCTCATTCTCACCTCAACCCACTTTACCCCACTTCT...TAGAATGCGAATCTGTGTTAAGAATCTAGTCTTTGTAATAGAAGTTTCCCAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
CDS-3UTR CCA 90 bp CACTGGGAAACTTCTATTACAAAGACTAGATTCTTAACACAGATTCGCATTCTATTGGAATCCCTGGTTTaGTACACTGAGGTAGGAATG +
Preference number: 4 (lower is better)
Translates to: HWETSITKTRFLTQIRILLESLV*YTEVGM
Trigger: CATTCCTACCTCAGTGTACCAAACCAGGGATTCCAA...TAGAATGCGAATCTGTGTTAAGAATCTAGTCTTTGTAATAGAAGTTTCCCAGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CCA 90 bp TTTTTCAACAGTTACGTGTTCTCCCAAACAAGAGCTAAAGCTCAAGTTTGTAAGGTTTCTAGCACTCCTTaGAAGGTTTTTGGAATCCCT +
Preference number: 4 (lower is better)
Translates to: FFNSYVFSQTRAKAQVCKVSSTP*KVFGIP
Trigger: AGGGATTCCAAAAACCTTCCAAGGAGTGCTAGAAAC...CTTACAAACTTGAGCTTTAGCTCTTGTTTGGGAGAACACGTAACTGTTGAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CCA 90 bp TTTGCTTTCATTAAAAAGATCTCCACACTGTCACTACGAAAATGTGCAGACAACTCAAATATGGGCAAATaGGCCCCTTCTCATCCTTAT +
Preference number: 4 (lower is better)
Translates to: FAFIKKISTLSLRKCADNSNMGK*APSHPY
Trigger: ATAAGGATGAGAAGGGGCCCATTTGCCCATATTTGA...GTTGTCTGCACATTTTCGTAGTGACAGTGTGGAGATCTTTTTAATGAAAGCAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CCA 90 bp TTTTTCAACAGTTACGTGTTCTCCCAAACAAGAGCTAAAGCTCAAGTTTGTAAGAAAGGTGGTCTCTCCTaGAAACAAGCAGTTCTAGTT +
Preference number: 4 (lower is better)
Translates to: FFNSYVFSQTRAKAQVCKKGGLS*KQAVLV
Trigger: AACTAGAACTGCTTGTTTCCAGGAGAGACCACCTTT...CTTACAAACTTGAGCTTTAGCTCTTGTTTGGGAGAACACGTAACTGTTGAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR CAA 72 bp GTCCAATCTAACATTTTAGGCACAAACCTTAATTTGTaGGGCAGGGTTAGGCATAATATATCCTTCCAAGTG +
Preference number: 4 (lower is better)
Translates to: VQSNILGTNLNL*GRVRHNISFQV
Trigger: CACTTGGAAGGATATATTATGCCTAACCCTGCCCAACAAATTAAGGTTTGTGCCTAAAATGTTAGATTGGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
CDS-3UTR TCA 90 bp CACTGGGAAACTTCTATTACAAAGACTAGATTCTTAACACAGATTCGCATTCTATGTGCAGACAACAGCTaGCTGGTACACAAAACAATT +
Preference number: 4 (lower is better)
Translates to: HWETSITKTRFLTQIRILCADNS*LVHKTI
Trigger: AATTGTTTTGTGTACCAGTCAGCTGTTGTCTGCACA...TAGAATGCGAATCTGTGTTAAGAATCTAGTCTTTGTAATAGAAGTTTCCCAGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
CDS-3UTR TCA 90 bp CATAATTTGTCTAAAACTCTCACTAGTGAATGCCACTGGGAAACTTCTATTACACACAGTAGTATAAACTaGAGGTCAACAGGCTCAAGA +
Preference number: 4 (lower is better)
Translates to: HNLSKTLTSECHWETSITHSSIN*RSTGSR
Trigger: TCTTGAGCCTGTTGACCTTCAGTTTATACTACTGTG...TGTAATAGAAGTTTCCCAGTGGCATTCACTAGTGAGAGTTTTAGACAAATTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR TCA 90 bp TTTAATCCTGCTGAAGAAGAGAAACGCGAACACCAAGTAAAACTTACTATAAACTGCTCCTCCCTAAAGTaGGAAATGAAGCCATATCTA +
Preference number: 4 (lower is better)
Translates to: FNPAEEEKREHQVKLTINCSSLK*EMKPYL
Trigger: TAGATATGGCTTCATTTCTCACTTTAGGGAGGAGCA...GTTTATAGTAAGTTTTACTTGGTGTTCGCGTTTCTCTTCTTCAGCAGGATTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR TCA 90 bp TTTTTCAACAGTTACGTGTTCTCCCAAACAAGAGCTAAAGCTCAAGTTTGTAAGTTTTCATGGAGAGCCTaGATTTTGAGGTACGATCTA +
Preference number: 4 (lower is better)
Translates to: FFNSYVFSQTRAKAQVCKFSWRA*ILRYDL
Trigger: TAGATCGTACCTCAAAATTCAGGCTCTCCATGAAAA...CTTACAAACTTGAGCTTTAGCTCTTGTTTGGGAGAACACGTAACTGTTGAAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR GCA 90 bp CATAATTTGTCTAAAACTCTCACTAGTGAATGCCACTGGGAAACTTCTATTACAGTTCATAGGTGGCAATaGTGTCCATGTATTTGCATC +
Preference number: 4 (lower is better)
Translates to: HNLSKTLTSECHWETSITVHRWQ*CPCICI
Trigger: GATGCAAATACATGGACAGCATTGCCACCTATGAAC...TGTAATAGAAGTTTCCCAGTGGCATTCACTAGTGAGAGTTTTAGACAAATTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
CDS-3UTR GCA 90 bp ATAGATCCACCTTTTAAACTCATCATGGTAGAACTCGGACTTGCAAGTTACCATATGGTCAAATCAGGTTaGTTTGTCCAGGTTTTAGAA +
Preference number: 4 (lower is better)
Translates to: IDPPFKLIMVELGLASYHMVKSG*FVQVLE
Trigger: TTCTAAAACCTGGACAAAGCAACCTGATTTGACCAT...ATGGTAACTTGCAAGTCCGAGTTCTACCATGATGAGTTTAAAAGGTGGATCTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000650388.1
CDS-3UTR GCA 90 bp CATAATTTGTCTAAAACTCTCACTAGTGAATGCCACTGGGAAACTTCTATTACAAGTTCACATGAGGGCTaGAACCTGACTCATCAATTT +
Preference number: 4 (lower is better)
Translates to: HNLSKTLTSECHWETSITSSHEG*NLTHQF
Trigger: AAATTGATGAGTCAGGTTGCAGCCCTCATGTGAACT...TGTAATAGAAGTTTCCCAGTGGCATTCACTAGTGAGAGTTTTAGACAAATTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
CDS-3UTR GCA 90 bp ACAGTCCAATCTAACATTTTAGGCACAAACCTTAATTTGTTGGGCAGGGTTAGGAAGTTATACCAAATATaGCAGGCTTTTAGAAATGGG +
Preference number: 4 (lower is better)
Translates to: TVQSNILGTNLNLLGRVRKLYQI*QAFRNG
Trigger: CCCATTTCTAAAAGCCTGGCATATTTGGTATAACTT...CCTAACCCTGCCCAACAAATTAAGGTTTGTGCCTAAAATGTTAGATTGGACTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CCA 90 bp ATAGATCCACCTTTTAAACTCATCATGGTAGAACTCGGACTTGCAAGTTACCATGATTTCACACTAGGGTaGTGTAATTCAAGTGGAAAA +
Preference number: 4 (lower is better)
Translates to: IDPPFKLIMVELGLASYHDFTLG*CNSSGK
Trigger: TTTTCCACTTGAATTACACCACCCTAGTGTGAAATC...ATGGTAACTTGCAAGTCCGAGTTCTACCATGATGAGTTTAAAAGGTGGATCTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648349.2
CDS-3UTR CCA 90 bp CAAGTGCAGTGGAAAAGCAGTCTTGGCATGTTTGGATATGTTGATTTGCATATAGCACCAGATTTTACCTaGTGCTTAAGTTATACCAAA +
Preference number: 4 (lower is better)
Translates to: QVQWKSSLGMFGYVDLHIAPDFT*CLSYTK
Trigger: TTTGGTATAACTTAAGCACCAGGTAAAATCTGGTGC...TATATGCAAATCAACATATCCAAACATGCCAAGACTGCTTTTCCACTGCACTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR CAA 72 bp ACAGTCCAATCTAACATTTTAGGCACAAACCTTAATTaGTTGGGCAGGGTTAGGCATAATATATCCTTCCAA +
Preference number: 4 (lower is better)
Translates to: TVQSNILGTNLN*LGRVRHNISFQ
Trigger: TTGGAAGGATATATTATGCCTAACCCTGCCCAACAAATTAAGGTTTGTGCCTAAAATGTTAGATTGGACTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
CDS-3UTR TCA 90 bp TTTTTCAACAGTTACGTGTTCTCCCAAACAAGAGCTAAAGCTCAAGTTTGTAAGGAACCAAACACAAGCTaGATTCAAAACGAAAAGAAC +
Preference number: 4 (lower is better)
Translates to: FFNSYVFSQTRAKAQVCKEPNTS*IQNEKN
Trigger: GTTCTTTTCGTTTTGAATTCAGCTTGTGTTTGGTTC...CTTACAAACTTGAGCTTTAGCTCTTGTTTGGGAGAACACGTAACTGTTGAAAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR GCA 90 bp TTTAATCCTGCTGAAGAAGAGAAACGCGAACACCAAGTAAAACTTACTATAAACACTCTCACTAGTGAATaGCACTGGGAAACTTCTATT +
Preference number: 4 (lower is better)
Translates to: FNPAEEEKREHQVKLTINTLTSE*HWETSI
Trigger: AATAGAAGTTTCCCAGTGGCATTCACTAGTGAGAGT...GTTTATAGTAAGTTTTACTTGGTGTTCGCGTTTCTCTTCTTCAGCAGGATTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CCA 90 bp CACTGGGAAACTTCTATTACAAAGACTAGATTCTTAACACAGATTCGCATTCTAAAACAAAAGAGGAACTaGCGGGGATGCATAAATTCT +
Preference number: 4 (lower is better)
Translates to: HWETSITKTRFLTQIRILKQKRN*RGCINS
Trigger: AGAATTTATGCATCCCCGCCAGTTCCTCTTTTGTTT...TAGAATGCGAATCTGTGTTAAGAATCTAGTCTTTGTAATAGAAGTTTCCCAGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
CDS-3UTR CCA 90 bp TTTGCTTTCATTAAAAAGATCTCCACACTGTCACTACGAAAATGTGCAGACAACGATTTCACACTAGGGTaGTGTAATTCAAGTGGAAAA +
Preference number: 4 (lower is better)
Translates to: FAFIKKISTLSLRKCADNDFTLG*CNSSGK
Trigger: TTTTCCACTTGAATTACACCACCCTAGTGTGAAATC...GTTGTCTGCACATTTTCGTAGTGACAGTGTGGAGATCTTTTTAATGAAAGCAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
CDS-3UTR CCA 90 bp CAAGTGCAGTGGAAAAGCAGTCTTGGCATGTTTGGATATGTTGATTTGCATATACCCTTACTAATTACATaGAATAAGAGAGGGAAGTAT +
Preference number: 4 (lower is better)
Translates to: QVQWKSSLGMFGYVDLHIPLLIT*NKRGKY
Trigger: ATACTTCCCTCTCTTATTCCATGTAATTAGTAAGGG...TATATGCAAATCAACATATCCAAACATGCCAAGACTGCTTTTCCACTGCACTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CCA 90 bp CAAGTGCAGTGGAAAAGCAGTCTTGGCATGTTTGGATATGTTGATTTGCATATATGTTTTACACAGCAGTaGCGTTTAAATAGACTACTT +
Preference number: 4 (lower is better)
Translates to: QVQWKSSLGMFGYVDLHICFTQQ*RLNRLL
Trigger: AAGTAGTCTATTTAAACGCCACTGCTGTGTAAAACA...TATATGCAAATCAACATATCCAAACATGCCAAGACTGCTTTTCCACTGCACTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CCA 90 bp TTTGCTTTCATTAAAAAGATCTCCACACTGTCACTACGAAAATGTGCAGACAACCTAACAGATTGTCATTaGAGGAGAAGCTTTGTCATT +
Preference number: 4 (lower is better)
Translates to: FAFIKKISTLSLRKCADNLTDCH*RRSFVI
Trigger: AATGACAAAGCTTCTCCTCCAATGACAATCTGTTAG...GTTGTCTGCACATTTTCGTAGTGACAGTGTGGAGATCTTTTTAATGAAAGCAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CCA 90 bp TTTAATCCTGCTGAAGAAGAGAAACGCGAACACCAAGTAAAACTTACTATAAACTATCACCCACACAAATaGAAGGCTCACTTCTTTACT +
Preference number: 4 (lower is better)
Translates to: FNPAEEEKREHQVKLTINYHPHK*KAHFFT
Trigger: AGTAAAGAAGTGAGCCTTCCATTTGTGTGGGTGATA...GTTTATAGTAAGTTTTACTTGGTGTTCGCGTTTCTCTTCTTCAGCAGGATTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR TCA 90 bp CACTGGGAAACTTCTATTACAAAGACTAGATTCTTAACACAGATTCGCATTCTAAGGCCAAATTTCAGCTaGGTAGTGACTTTAAAAGAA +
Preference number: 4 (lower is better)
Translates to: HWETSITKTRFLTQIRILRPNFS*VVTLKE
Trigger: TTCTTTTAAAGTCACTACTCAGCTGAAATTTGGCCT...TAGAATGCGAATCTGTGTTAAGAATCTAGTCTTTGTAATAGAAGTTTCCCAGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR TCA 90 bp TTTAATCCTGCTGAAGAAGAGAAACGCGAACACCAAGTAAAACTTACTATAAACGAAATCAAGACAAGCTaGGCACATTATATACTCCTA +
Preference number: 4 (lower is better)
Translates to: FNPAEEEKREHQVKLTINEIKTS*AHYILL
Trigger: TAGGAGTATATAATGTGCTCAGCTTGTCTTGATTTC...GTTTATAGTAAGTTTTACTTGGTGTTCGCGTTTCTCTTCTTCAGCAGGATTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR GCA 90 bp TGTCCAGGTTTTAGAATAAATATCGTAACACTCCATGGAAATCAGCTCCTTTTCTATTTCTGTATCATGTaGTATCCATCGAATTACTGC +
Preference number: 4 (lower is better)
Translates to: CPGFRINIVTLHGNQLLFYFCIM*YPSNYC
Trigger: GCAGTAATTCGATGGATAGCACATGATACAGAAATA...GAAAAGGAGCTGATTTCCATGGAGTGTTACGATATTTATTCTAAAACCTGGACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648349.2
CDS-3UTR GCA 90 bp TTTTTCAACAGTTACGTGTTCTCCCAAACAAGAGCTAAAGCTCAAGTTTGTAAGAAAGAAATACTATTCTaGAGGTCCCATGTCAGAAAA +
Preference number: 4 (lower is better)
Translates to: FFNSYVFSQTRAKAQVCKKEILF*RSHVRK
Trigger: TTTTCTGACATGGGACCTGCAGAATAGTATTTCTTT...CTTACAAACTTGAGCTTTAGCTCTTGTTTGGGAGAACACGTAACTGTTGAAAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CCA 90 bp CACTGGGAAACTTCTATTACAAAGACTAGATTCTTAACACAGATTCGCATTCTACAAACCTTAATTTGTTaGGCAGGGTTAGGCATAATA +
Preference number: 4 (lower is better)
Translates to: HWETSITKTRFLTQIRILQTLIC*AGLGII
Trigger: TATTATGCCTAACCCTGCCCAACAAATTAAGGTTTG...TAGAATGCGAATCTGTGTTAAGAATCTAGTCTTTGTAATAGAAGTTTCCCAGTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
CDS-3UTR CCA 90 bp CACTGGGAAACTTCTATTACAAAGACTAGATTCTTAACACAGATTCGCATTCTATGTACATCAGGCACTTaGCATTGTTTATGCTATACT +
Preference number: 4 (lower is better)
Translates to: HWETSITKTRFLTQIRILCTSGT*HCLCYT
Trigger: AGTATAGCATAAACAATGCCAAGTGCCTGATGTACA...TAGAATGCGAATCTGTGTTAAGAATCTAGTCTTTGTAATAGAAGTTTCCCAGTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR CAA 72 bp TTTGTTAAAGAACAGAATGTGTTGAATTCTTCTCAATaGGCAGGGGATCAAGCACAATACTACATAATGAGG +
Preference number: 4 (lower is better)
Translates to: FVKEQNVLNSSQ*AGDQAQYYIMR
Trigger: CCTCATTATGTAGTATTGTGCTTGATCCCCTGCCAATTGAGAAGAATTCAACACATTCTGTTCTTTAACAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
3UTR CAA 72 bp TCTTTCAATGTGTGCACAGAAGGAAGCTCAACAACTTaGTTGAGCCAGGAAGAAATTATTATCAACATTTAT +
Preference number: 4 (lower is better)
Translates to: SFNVCTEGSSTT*LSQEEIIINIY
Trigger: ATAAATGTTGATAATAATTTCTTCCTGGCTCAACAAAGTTGTTGAGCTTCCTTCTGTGCACACATTGAAAGA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CCA 90 bp TTTAATCCTGCTGAAGAAGAGAAACGCGAACACCAAGTAAAACTTACTATAAACATTAGAGAATTTCACTaGGCAAATTCTAAACAGAGG +
Preference number: 4 (lower is better)
Translates to: FNPAEEEKREHQVKLTINIREFH*ANSKQR
Trigger: CCTCTGTTTAGAATTTGCCCAGTGAAATTCTCTAAT...GTTTATAGTAAGTTTTACTTGGTGTTCGCGTTTCTCTTCTTCAGCAGGATTAAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS GCA 90 bp GGTCAGACACGGCACTGCCCTCAGCCATCGCGGCGCCCGCTCCTCTaGCGACGGGTCCGGCTCCCGACACCGTCCGGCCGGACCCCTCGA +
Preference number: 5 (lower is better)
Translates to: GQTRHCPQPSRRPLL*RRVRLPTPSGRTPR
Trigger: TCGAGGGGTCCGGCCGGACGGTGTCGGGAGCCGGACCCGTCGGCAGAGGAGCGGGCGCCGCGATGGCTGAGGGCAGTGCCGTGTCTGACC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000648349.2
ENST00000648994.2
ENST00000674788.1
CDS GCA 90 bp GCGCTCGCAGCAGACGCGCGGCGTGCTGAGGGTCAGACACGGCACTaGCCTCAGCCATCGCGGCGCCCGCTCCTCTGCCGACGGGTCCGG +
Preference number: 5 (lower is better)
Translates to: ALAADARRAEGQTRH*PQPSRRPLLCRRVR
Trigger: CCGGACCCGTCGGCAGAGGAGCGGGCGCCGCGATGGCTGAGGGCAGTGCCGTGTCTGACCCTCAGCACGCCGCGCGTCTGCTGCGAGCGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000648349.2
ENST00000648994.2
ENST00000674788.1
CDS TCA 90 bp TCCTCGCGGAAAGAGCTGAGCGCTCGCAGCAGACGCGCGGCGTGCTaGGGGTCAGACACGGCACTGCCCTCAGCCATCGCGGCGCCCGCT +
Preference number: 5 (lower is better)
Translates to: SSRKELSARSRRAAC*GSDTALPSAIAAPA
Trigger: AGCGGGCGCCGCGATGGCTGAGGGCAGTGCCGTGTCTGACCCTCAGCACGCCGCGCGTCTGCTGCGAGCGCTCAGCTCTTTCCGCGAGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000648349.2
ENST00000648994.2
ENST00000674788.1
CDS TCA 90 bp GGACCAGGTGCGCGTCGCAGAAGCGAGACTCCTCGCGGAAAGAGCTaGGCGCTCGCAGCAGACGCGCGGCGTGCTGAGGGTCAGACACGG +
Preference number: 5 (lower is better)
Translates to: GPGARRRSETPRGKS*ALAADARRAEGQTR
Trigger: CCGTGTCTGACCCTCAGCACGCCGCGCGTCTGCTGCGAGCGCTCAGCTCTTTCCGCGAGGAGTCTCGCTTCTGCGACGCGCACCTGGTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000648349.2
ENST00000648994.2
ENST00000650388.1
ENST00000674788.1
CDS GCA 90 bp CATGTGGACCTGATGTACGGGCTGGCCGCCGCCAGGATGTTCTTCTaGACCGGGATCTCCTCCCCGTCGAGGACCAGGTGCGCGTCGCAG +
Preference number: 5 (lower is better)
Translates to: HVDLMYGLAAARMFF*TGISSPSRTRCASQ
Trigger: CTGCGACGCGCACCTGGTCCTCGACGGGGAGGAGATCCCGGTGCAGAAGAACATCCTGGCGGCGGCCAGCCCGTACATCAGGTCCACATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650388.1
CDS GCA 90 bp AACTTTGTCCTGATGTACGGGCTGGCCGCCGCCAGGATGTTCTTCTaGACCGGGATCTCCTCCCCGTCGAGGACCAGGTGCGCGTCGCAG +
Preference number: 5 (lower is better)
Translates to: NFVLMYGLAAARMFF*TGISSPSRTRCASQ
Trigger: CTGCGACGCGCACCTGGTCCTCGACGGGGAGGAGATCCCGGTGCAGAAGAACATCCTGGCGGCGGCCAGCCCGTACATCAGGACAAAGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648994.2
ENST00000674788.1
CDS GCA 90 bp AGGATGTTCTTCTGCACCGGGATCTCCTCCCCGTCGAGGACCAGGTaGGCGTCGCAGAAGCGAGACTCCTCGCGGAAAGAGCTGAGCGCT +
Preference number: 5 (lower is better)
Translates to: RMFFCTGISSPSRTR*ASQKRDSSRKELSA
Trigger: AGCGCTCAGCTCTTTCCGCGAGGAGTCTCGCTTCTGCGACGCGCACCTGGTCCTCGACGGGGAGGAGATCCCGGTGCAGAAGAACATCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000648349.2
ENST00000648994.2
ENST00000650388.1
ENST00000674788.1
CDS-3UTR CAA 90 bp AGCATCGCCTCCCCTTGCTGCGGCTGGCTGAGCGGTATATTGCTACACTCTTTGCAGCATCGCCTCCCCTaGCTGCGGCTGGCTGAGCGG +
Preference number: 5 (lower is better)
Translates to: SIASPCCGWLSGILLHSLQHRLP*LRLAER
Trigger: CCGCTCAGCCAGCCGCAGCAAGGGGAGGCGATGCTG...CAAAGAGTGTAGCAATATACCGCTCAGCCAGCCGCAGCAAGGGGAGGCGATGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000650388.1
CDS-3UTR CAA 90 bp AGCTGGTTGTGGAAAGTGCTAGTATGCAGGTCTGCTCAGGGATCTGTGAGGCTCTACGGAGTGGGAAGGTaGCCGTGCCAACCTCCCCTA +
Preference number: 5 (lower is better)
Translates to: SWLWKVLVCRSAQGSVRLYGVGR*PCQPPL
Trigger: TAGGGGAGGTTGGCACGGCAACCTTCCCACTCCGTA...GAGCCTCACAGATCCCTGAGCAGACCTGCATACTAGCACTTTCCACAACCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CAA 90 bp AAGATCTCCCGAGAGGAAGAGTCTTGCCTACAACTGGTGAGCCTCCTCATCTTCCGCTGGGATGTGTCCTaGGCGGTGCCTCAGAAGGCA +
Preference number: 5 (lower is better)
Translates to: KISREEESCLQLVSLLIFRWDVS*AVPQKA
Trigger: TGCCTTCTGAGGCACCGCCAAGGACACATCCCAGCG...GAAGATGAGGAGGCTCACCAGTTGTAGGCAAGACTCTTCCTCTCGGGAGATCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CAA 90 bp GACTTGCAAGTTACCATCTCGCTACCCTGGGCGTCCTCACGACTTCGGACTCCCTGCAGGCGGAAAAGCTaGCAATTCGCAATGCGTAAG +
Preference number: 5 (lower is better)
Translates to: DLQVTISLPWASSRLRTPCRRKS*QFAMRK
Trigger: CTTACGCATTGCGAATTGCAAGCTTTTCCGCCTGCA...GGGAGTCCGAAGTCGTGAGGACGCCCAGGGTAGCGAGATGGTAACTTGCAAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000650388.1
CDS-3UTR CAA 90 bp TTGCAAGTTACCATCTCGCTACCCTGGGCGTCCTCACGACTTCGGACTCCCCCATATGTTATGGTGCTCTaGGGTCAGGATCTCGCACTC +
Preference number: 5 (lower is better)
Translates to: LQVTISLPWASSRLRTPPYVMVL*GQDLAL
Trigger: GAGTGCGAGATCCTGACCCAAGAGCACCATAACATA...TGGGGGAGTCCGAAGTCGTGAGGACGCCCAGGGTAGCGAGATGGTAACTTGCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648349.2
CDS-3UTR CAA 90 bp AAGATCTCCCGAGAGGAAGAGTCTTGCCTACAACTGGTGAGCCTCCTCATCTTCGCTGATGATACCCTTTaGCCCGCCCCATGTACCAGA +
Preference number: 5 (lower is better)
Translates to: KISREEESCLQLVSLLIFADDTL*PAPCTR
Trigger: TCTGGTACATGGGGCGGGCAAAAGGGTATCATCAGC...GAAGATGAGGAGGCTCACCAGTTGTAGGCAAGACTCTTCCTCTCGGGAGATCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CAA 90 bp GGACTTGCAAGTTACCATCTCGCTACCCTGGGCGTCCTCACGACTTCGGACTCCTGGCTGAGCGGTATATaGCTACACTCTTTGACAATT +
Preference number: 5 (lower is better)
Translates to: GLASYHLATLGVLTTSDSWLSGI*LHSLTI
Trigger: AATTGTCAAAGAGTGTAGCAATATACCGCTCAGCCA...GGAGTCCGAAGTCGTGAGGACGCCCAGGGTAGCGAGATGGTAACTTGCAAGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000650388.1
CDS-3UTR CAA 90 bp CAAGTGCAGTGGAAAAGCAGTCTTGGCATGTTTGGATATGTTGATTTGCATATACAGCATCGCCTCCCCTaGCTGCGGCTGGCTGAGCGG +
Preference number: 5 (lower is better)
Translates to: QVQWKSSLGMFGYVDLHIQHRLP*LRLAER
Trigger: CCGCTCAGCCAGCCGCAGCAAGGGGAGGCGATGCTG...TATATGCAAATCAACATATCCAAACATGCCAAGACTGCTTTTCCACTGCACTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
CDS-3UTR CAA 90 bp TTGCAAGTTACCATCTCGCTACCCTGGGCGTCCTCACGACTTCGGACTCCCCCACTGCTTATTTTCATCTaGGCCCCCGAATACAAACAA +
Preference number: 5 (lower is better)
Translates to: LQVTISLPWASSRLRTPPLLIFI*APEYKQ
Trigger: TTGTTTGTATTCGGGGGCCAAGATGAAAATAAGCAG...TGGGGGAGTCCGAAGTCGTGAGGACGCCCAGGGTAGCGAGATGGTAACTTGCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000650388.1
CDS-3UTR CAA 90 bp CTCTCCCTTTCGGAGCTATGTTATGGTGCTCTTGGGTCAGGATCTCGCACTCTGTATGTTATGGTGCTCTaGGGTCAGGATCTCGCACTC +
Preference number: 5 (lower is better)
Translates to: LSLSELCYGALGSGSRTLYVMVL*GQDLAL
Trigger: GAGTGCGAGATCCTGACCCAAGAGCACCATAACATA...CAGAGTGCGAGATCCTGACCCAAGAGCACCATAACATAGCTCCGAAAGGGAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
CDS-3UTR CAA 90 bp CTTGCAAGTTACCATCTCGCTACCCTGGGCGTCCTCACGACTTCGGACTCCCCCACAAACCTTAATTTGTaGGGCAGGGTTAGGCATAAT +
Preference number: 5 (lower is better)
Translates to: LASYHLATLGVLTTSDSPTNLNL*GRVRHN
Trigger: ATTATGCCTAACCCTGCCCAACAAATTAAGGTTTGT...GGGGGAGTCCGAAGTCGTGAGGACGCCCAGGGTAGCGAGATGGTAACTTGCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648349.2
CDS-3UTR CAA 90 bp AGCTGGTTGTGGAAAGTGCTAGTATGCAGGTCTGCTCAGGGATCTGTGAGGCTCTCCCACCACCCCATGTaGAGAGGTGACATAATCATG +
Preference number: 5 (lower is better)
Translates to: SWLWKVLVCRSAQGSVRLSHHPM*RGDIIM
Trigger: CATGATTATGTCACCTCTCAACATGGGGTGGTGGGA...GAGCCTCACAGATCCCTGAGCAGACCTGCATACTAGCACTTTCCACAACCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CAA 90 bp ACTTCTTTACTTCTTAAGCTGATGATACCCTTTTGCCCGCCCCATGTACCAGATTGTAGTCCCAGCTACTaGGCAGGCCGAGGCAGGAGG +
Preference number: 5 (lower is better)
Translates to: TSLLLKLMIPFCPPHVPDCSPSY*AGRGRR
Trigger: CCTCCTGCCTCGGCCTGCCAAGTAGCTGGGACTACA...ATCTGGTACATGGGGCGGGCAAAAGGGTATCATCAGCTTAAGAAGTAAAGAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CAA 90 bp CTCTCCCTTTCGGAGCTATGTTATGGTGCTCTTGGGTCAGGATCTCGCACTCTGAACACCCAACACATCTaGCCCAGCACTCTTCTTTGC +
Preference number: 5 (lower is better)
Translates to: LSLSELCYGALGSGSRTLNTQHI*PSTLLC
Trigger: GCAAAGAAGAGTGCTGGGCAAGATGTGTTGGGTGTT...CAGAGTGCGAGATCCTGACCCAAGAGCACCATAACATAGCTCCGAAAGGGAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CAA 90 bp GAACCCCATAGGCACAGCATCTTTCAGCAACTTTTGACGCATTGTACTGACTTCGAGCAGGGGGTGCTTTaGTCAGCTCTGCTGGTCACT +
Preference number: 5 (lower is better)
Translates to: EPHRHSIFQQLLTHCTDFEQGVL*SALLVT
Trigger: AGTGACCAGCAGAGCTGACAAAAGCACCCCCTGCTC...GAAGTCAGTACAATGCGTCAAAAGTTGCTGAAAGATGCTGTGCCTATGGGGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CAA 90 bp GTTACCATCTCGCTACCCTGGGCGTCCTCACGACTTCGGACTCCCCCAAACACAATGCTGTCCATGTATTaGCATCTGGATCATACTTTT +
Preference number: 5 (lower is better)
Translates to: VTISLPWASSRLRTPPNTMLSMY*HLDHTF
Trigger: AAAAGTATGATCCAGATGCAAATACATGGACAGCAT...TGTGTTTGGGGGAGTCCGAAGTCGTGAGGACGCCCAGGGTAGCGAGATGGTAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000650388.1
CDS-3UTR CAA 90 bp TTGCAAGTTACCATCTCGCTACCCTGGGCGTCCTCACGACTTCGGACTCCCCCAATGCTGTCCATGTATTaGCATCTGGATCATACTTTT +
Preference number: 5 (lower is better)
Translates to: LQVTISLPWASSRLRTPPMLSMY*HLDHTF
Trigger: AAAAGTATGATCCAGATGCAAATACATGGACAGCAT...TGGGGGAGTCCGAAGTCGTGAGGACGCCCAGGGTAGCGAGATGGTAACTTGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000650388.1
CDS-3UTR CAA 90 bp ATAAGCCTTGCTGAAGCTGCAGGCGGAAAAGCTTGCAATTCGCAATGCGTAAGGTGCAGGCGGAAAAGCTaGCAATTCGCAATGCGTAAG +
Preference number: 5 (lower is better)
Translates to: ISLAEAAGGKACNSQCVRCRRKS*QFAMRK
Trigger: CTTACGCATTGCGAATTGCAAGCTTTTCCGCCTGCA...CCTTACGCATTGCGAATTGCAAGCTTTTCCGCCTGCAGCTTCAGCAAGGCTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000650388.1
CDS-3UTR CAA 90 bp CATCCTGTACGGCGAAGGTCGGATGGAAGGAGTGGTTTAGTGTGGTGCCAGGTTAGTGGAAAAGCAGTCTaGGCATGTTTGGATATGTTG +
Preference number: 5 (lower is better)
Translates to: HPVRRRSDGRSGLVWCQVSGKAV*ACLDML
Trigger: CAACATATCCAAACATGCCAAGACTGCTTTTCCACT...AACCTGGCACCACACTAAACCACTCCTTCCATCCGACCTTCGCCGTACAGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648349.2
CDS-3UTR CAA 90 bp TTCTTCCGTGCTGCTGACGTCTCGGAAATGAGTCTCCAGGTATTCTGTGGCAAGGGCACAAACCTTAATTaGTTGGGCAGGGTTAGGCAT +
Preference number: 5 (lower is better)
Translates to: FFRAADVSEMSLQVFCGKGTNLN*LGRVRH
Trigger: ATGCCTAACCCTGCCCAACAAATTAAGGTTTGTGCC...CTTGCCACAGAATACCTGGAGACTCATTTCCGAGACGTCAGCAGCACGGAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648349.2
CDS-3UTR CAA 90 bp AAGATCTCCCGAGAGGAAGAGTCTTGCCTACAACTGGTGAGCCTCCTCATCTTCGGCACAAACCTTAATTaGTTGGGCAGGGTTAGGCAT +
Preference number: 5 (lower is better)
Translates to: KISREEESCLQLVSLLIFGTNLN*LGRVRH
Trigger: ATGCCTAACCCTGCCCAACAAATTAAGGTTTGTGCC...GAAGATGAGGAGGCTCACCAGTTGTAGGCAAGACTCTTCCTCTCGGGAGATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CAA 90 bp GAACCCCATAGGCACAGCATCTTTCAGCAACTTTTGACGCATTGTACTGACTTCCTCATCAGACATGTGTaGGCTGACCCAAGGCGGGTT +
Preference number: 5 (lower is better)
Translates to: EPHRHSIFQQLLTHCTDFLIRHV*ADPRRV
Trigger: AACCCGCCTTGGGTCAGCCAACACATGTCTGATGAG...GAAGTCAGTACAATGCGTCAAAAGTTGCTGAAAGATGCTGTGCCTATGGGGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CAA 90 bp GAACCCCATAGGCACAGCATCTTTCAGCAACTTTTGACGCATTGTACTGACTTCCCCGGACTCTGTGTGTaGCCATCCTTTTCCACCTGT +
Preference number: 5 (lower is better)
Translates to: EPHRHSIFQQLLTHCTDFPGLCV*PSFSTC
Trigger: ACAGGTGGAAAAGGATGGCAACACACAGAGTCCGGG...GAAGTCAGTACAATGCGTCAAAAGTTGCTGAAAGATGCTGTGCCTATGGGGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CAA 90 bp ACTTCTTTACTTCTTAAGCTGATGATACCCTTTTGCCCGCCCCATGTACCAGATGCCAGGGCCAGCTGGTaGTGGAAAGTGCTAGTATGC +
Preference number: 5 (lower is better)
Translates to: TSLLLKLMIPFCPPHVPDARASW*WKVLVC
Trigger: GCATACTAGCACTTTCCACAACCAGCTGGCCCTGGC...ATCTGGTACATGGGGCGGGCAAAAGGGTATCATCAGCTTAAGAAGTAAAGAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS TCA 90 bp CAGCACAGGGTTTTAAGGTCCGTCAGTAGCAGCAGGTCAGCTGCCTaGACAACATCTTGGATTGTATCTTCATTTAGCCTGATCTGCCCA +
Preference number: 5 (lower is better)
Translates to: QHRVLRSVSSSRSAA*TTSWIVSSFSLICP
Trigger: TGGGCAGATCAGGCTAAATGAAGATACAATCCAAGATGTTGTTCAGGCAGCTGACCTGCTGCTACTGACGGACCTTAAAACCCTGTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648994.2
ENST00000674788.1
CDS-3UTR CAA 90 bp AGCTGGTTGTGGAAAGTGCTAGTATGCAGGTCTGCTCAGGGATCTGTGAGGCTCCATGGTCAAATCAGGTaGCTTTGTCCAGGTTTTAGA +
Preference number: 5 (lower is better)
Translates to: SWLWKVLVCRSAQGSVRLHGQIR*LCPGFR
Trigger: TCTAAAACCTGGACAAAGCAACCTGATTTGACCATG...GAGCCTCACAGATCCCTGAGCAGACCTGCATACTAGCACTTTCCACAACCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CAA 90 bp ATGGTAGAACTCGGACTTGCAAGTTACCATCTCGCTACCCTGGGCGTCCTCACGGCAGTCTTGGCATGTTaGGATATGTTGATTTGCATA +
Preference number: 5 (lower is better)
Translates to: MVELGLASYHLATLGVLTAVLAC*DMLICI
Trigger: TATGCAAATCAACATATCCAAACATGCCAAGACTGC...CGTGAGGACGCCCAGGGTAGCGAGATGGTAACTTGCAAGTCCGAGTTCTACCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648349.2
CDS-3UTR CAA 90 bp ACAGTTCCTAGTGGGTGCTCATCAGACATGTGTTGGCTGACCCAAGGCGGGTTTGCTAACAGATTGTCATaGGAGGAGAAGCTTTGTCAT +
Preference number: 5 (lower is better)
Translates to: TVPSGCSSDMCWLTQGGFANRLS*EEKLCH
Trigger: ATGACAAAGCTTCTCCTCCAATGACAATCTGTTAGC...AAACCCGCCTTGGGTCAGCCAACACATGTCTGATGAGCACCCACTAGGAACTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CAA 90 bp GAACCCCATAGGCACAGCATCTTTCAGCAACTTTTGACGCATTGTACTGACTTCTGCAGGCGGAAAAGCTaGCAATTCGCAATGCGTAAG +
Preference number: 5 (lower is better)
Translates to: EPHRHSIFQQLLTHCTDFCRRKS*QFAMRK
Trigger: CTTACGCATTGCGAATTGCAAGCTTTTCCGCCTGCA...GAAGTCAGTACAATGCGTCAAAAGTTGCTGAAAGATGCTGTGCCTATGGGGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
CDS-3UTR CAA 90 bp TGCACATCCTGTACGGCGAAGGTCGGATGGAAGGAGTGGTTTAGTGTGGTGCCATTGCATATACGGATTTaGTTTGTTACCAAAGCTACG +
Preference number: 5 (lower is better)
Translates to: CTSCTAKVGWKEWFSVVPLHIRI*FVTKAT
Trigger: CGTAGCTTTGGTAACAAACAAAATCCGTATATGCAA...TGGCACCACACTAAACCACTCCTTCCATCCGACCTTCGCCGTACAGGATGTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648349.2
CDS-3UTR CAA 90 bp CATAGAGAGGGCACATGCATCGCATCGCTGCTGTGGGTTTCCGTGAAACTCTCTGCAGACCTTTATTATTaGTCTGACTCAGGTCTTTCT +
Preference number: 5 (lower is better)
Translates to: HREGTCIASLLWVSVKLSADLYY*SDSGLS
Trigger: AGAAAGACCTGAGTCAGACAAATAATAAAGGTCTGC...AGAGAGTTTCACGGAAACCCACAGCAGCGATGCGATGCATGTGCCCTCTCTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648349.2
CDS-3UTR CAA 90 bp CTCTCCCTTTCGGAGCTATGTTATGGTGCTCTTGGGTCAGGATCTCGCACTCTGGTAGTAAACAAGACTTaGTGTGCTTTCAGACAGGTT +
Preference number: 5 (lower is better)
Translates to: LSLSELCYGALGSGSRTLVVNKT*CAFRQV
Trigger: AACCTGTCTGAAAGCACACAAAGTCTTGTTTACTAC...CAGAGTGCGAGATCCTGACCCAAGAGCACCATAACATAGCTCCGAAAGGGAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
CDS-3UTR CAA 90 bp AGCTGGTTGTGGAAAGTGCTAGTATGCAGGTCTGCTCAGGGATCTGTGAGGCTCGTAGTAAACAAGACTTaGTGTGCTTTCAGACAGGTT +
Preference number: 5 (lower is better)
Translates to: SWLWKVLVCRSAQGSVRLVVNKT*CAFRQV
Trigger: AACCTGTCTGAAAGCACACAAAGTCTTGTTTACTAC...GAGCCTCACAGATCCCTGAGCAGACCTGCATACTAGCACTTTCCACAACCAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CAA 90 bp CCTTCCAAAAACTCACAGCACAGGGTTTTAAGGTCCGTCAGTAGCAGCAGGTCAAAGGAATCAAGCACTTaGAAGTCCCCGATTTCACAC +
Preference number: 5 (lower is better)
Translates to: PSKNSQHRVLRSVSSSRSKESST*KSPISH
Trigger: GTGTGAAATCGGGGACTTCAAAGTGCTTGATTCCTT...TGACCTGCTGCTACTGACGGACCTTAAAACCCTGTGCTGTGAGTTTTTGGAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000648349.2
CDS-3UTR CAA 90 bp CTCTCCCTTTCGGAGCTATGTTATGGTGCTCTTGGGTCAGGATCTCGCACTCTGATCTTTCAGCAACTTTaGACGCATTGTACTGACTTC +
Preference number: 5 (lower is better)
Translates to: LSLSELCYGALGSGSRTLIFQQL*THCTDF
Trigger: GAAGTCAGTACAATGCGTCAAAAGTTGCTGAAAGAT...CAGAGTGCGAGATCCTGACCCAAGAGCACCATAACATAGCTCCGAAAGGGAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
CDS-3UTR CAA 90 bp GGGTCAGGATCTCGCACTCTGCTCTGCTTCCTCCTCAAGGGGAATGAACACGAACAGAGGCCACATAGTTaGCTTTCATTAAAAAGATCT +
Preference number: 5 (lower is better)
Translates to: GSGSRTLLCFLLKGNEHEQRPHS*LSLKRS
Trigger: AGATCTTTTTAATGAAAGCAAACTATGTGGCCTCTG...TTCGTGTTCATTCCCCTTGAGGAGGAAGCAGAGCAGAGTGCGAGATCCTGACCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648349.2
CDS-3UTR CAA 90 bp CAGCTGCTGAATGCCAAGGTACTGTTCTGTACAGGACATTTCACCAAAGCAAATACCACGGGAGGCCTCTaGAATCATGAACGCCAACAT +
Preference number: 5 (lower is better)
Translates to: QLLNAKVLFCTGHFTKANTTGGL*NHERQH
Trigger: ATGTTGGCGTTCATGATTCAAGAGGCCTCCCGTGGT...ATTTGCTTTGGTGAAATGTCCTGTACAGAACAGTACCTTGGCATTCAGCAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CAA 90 bp AGCTGGTTGTGGAAAGTGCTAGTATGCAGGTCTGCTCAGGGATCTGTGAGGCTCCAACGACAGTTAAACTaGGCTATACTTGGTACAACT +
Preference number: 5 (lower is better)
Translates to: SWLWKVLVCRSAQGSVRLQRQLN*AILGTT
Trigger: AGTTGTACCAAGTATAGCCAAGTTTAACTGTCGTTG...GAGCCTCACAGATCCCTGAGCAGACCTGCATACTAGCACTTTCCACAACCAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CAA 90 bp ATGCATCGCATCGCTGCTGTGGGTTTCCGTGAAACTCTCTCTTCTCCACCAACAACCAAAGCTACGTATTaGAATACAGCAGTCAGACAT +
Preference number: 5 (lower is better)
Translates to: MHRIAAVGFRETLSSPPTTKATY*NTAVRH
Trigger: ATGTCTGACTGCTGTATTCAAATACGTAGCTTTGGT...TGTTGGTGGAGAAGAGAGAGTTTCACGGAAACCCACAGCAGCGATGCGATGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648349.2
CDS-3UTR CAA 90 bp AAGGTTGCCGTGCCAACCTCCCCTAGGGCAGGAGAAACAACTGGCATATGTTCATTGCATATACGGATTTaGTTTGTTACCAAAGCTACG +
Preference number: 5 (lower is better)
Translates to: KVAVPTSPRAGETTGICSLHIRI*FVTKAT
Trigger: CGTAGCTTTGGTAACAAACAAAATCCGTATATGCAA...TGAACATATGCCAGTTGTTTCTCCTGCCCTAGGGGAGGTTGGCACGGCAACCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CAA 90 bp AAGATCTCCCGAGAGGAAGAGTCTTGCCTACAACTGGTGAGCCTCCTCATCTTCATGCTGTCCATGTATTaGCATCTGGATCATACTTTT +
Preference number: 5 (lower is better)
Translates to: KISREEESCLQLVSLLIFMLSMY*HLDHTF
Trigger: AAAAGTATGATCCAGATGCAAATACATGGACAGCAT...GAAGATGAGGAGGCTCACCAGTTGTAGGCAAGACTCTTCCTCTCGGGAGATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CAA 90 bp GAACACGAATACGGAATAAGCCTTGCTGAAGCTGCAGGCGGAAAAGCTTGCAATCATGGTCAAATCAGGTaGCTTTGTCCAGGTTTTAGA +
Preference number: 5 (lower is better)
Translates to: EHEYGISLAEAAGGKACNHGQIR*LCPGFR
Trigger: TCTAAAACCTGGACAAAGCAACCTGATTTGACCATG...ATTGCAAGCTTTTCCGCCTGCAGCTTCAGCAAGGCTTATTCCGTATTCGTGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000650388.1
CDS-3UTR CAA 90 bp AAGATCTCCCGAGAGGAAGAGTCTTGCCTACAACTGGTGAGCCTCCTCATCTTCCCCAAATGCTCCTTTTaGGTTGTTATACAGTTTGAA +
Preference number: 5 (lower is better)
Translates to: KISREEESCLQLVSLLIFPKCSF*VVIQFE
Trigger: TTCAAACTGTATAACAACCAAAAAGGAGCATTTGGG...GAAGATGAGGAGGCTCACCAGTTGTAGGCAAGACTCTTCCTCTCGGGAGATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CAA 90 bp GAACCCCATAGGCACAGCATCTTTCAGCAACTTTTGACGCATTGTACTGACTTCTCCGGCATCTTTAAATaGATACAGTCAAAGCGCCAC +
Preference number: 5 (lower is better)
Translates to: EPHRHSIFQQLLTHCTDFSGIFK*IQSKRH
Trigger: GTGGCGCTTTGACTGTATCAATTTAAAGATGCCGGA...GAAGTCAGTACAATGCGTCAAAAGTTGCTGAAAGATGCTGTGCCTATGGGGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CAA 90 bp TTTTTCAACAGTTACGTGTTCTCCCAAACAAGAGCTAAAGCTCAAGTTTGTAAGCAACAATCAGGTCCCTaGGTGACGACGTGCCCCATC +
Preference number: 5 (lower is better)
Translates to: FFNSYVFSQTRAKAQVCKQQSGP*VTTCPI
Trigger: GATGGGGCACGTCGTCACCAAGGGACCTGATTGTTG...CTTACAAACTTGAGCTTTAGCTCTTGTTTGGGAGAACACGTAACTGTTGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CAA 90 bp ATGGTTCATTCAGCATCTGTTCCCGTAAATAACTGGAGTCCAACCCTGAAACCCCTGCTTATTTTCATCTaGGCCCCCGAATACAAACAA +
Preference number: 5 (lower is better)
Translates to: MVHSASVPVNNWSPTLKPLLIFI*APEYKQ
Trigger: TTGTTTGTATTCGGGGGCCAAGATGAAAATAAGCAG...GGGTTTCAGGGTTGGACTCCAGTTATTTACGGGAACAGATGCTGAATGAACCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000650388.1
CDS-3UTR CAA 90 bp TTTTTCAACAGTTACGTGTTCTCCCAAACAAGAGCTAAAGCTCAAGTTTGTAAGAGGCAGGATGATTGCTaGAACCCAGGAGGCGGAGAT +
Preference number: 5 (lower is better)
Translates to: FFNSYVFSQTRAKAQVCKRQDDC*NPGGGD
Trigger: ATCTCCGCCTCCTGGGTTCAAGCAATCATCCTGCCT...CTTACAAACTTGAGCTTTAGCTCTTGTTTGGGAGAACACGTAACTGTTGAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CAA 90 bp GAACCCCATAGGCACAGCATCTTTCAGCAACTTTTGACGCATTGTACTGACTTCGGAAGCTCAACAACTTaGTTGAGCCAGGAAGAAATT +
Preference number: 5 (lower is better)
Translates to: EPHRHSIFQQLLTHCTDFGSSTT*LSQEEI
Trigger: AATTTCTTCCTGGCTCAACAAAGTTGTTGAGCTTCC...GAAGTCAGTACAATGCGTCAAAAGTTGCTGAAAGATGCTGTGCCTATGGGGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CAA 90 bp TTTTTCAACAGTTACGTGTTCTCCCAAACAAGAGCTAAAGCTCAAGTTTGTAAGCCGAGAGGAAGAGTCTaGCCTACAACTGGTGAGCCT +
Preference number: 5 (lower is better)
Translates to: FFNSYVFSQTRAKAQVCKPRGRV*PTTGEP
Trigger: AGGCTCACCAGTTGTAGGCAAGACTCTTCCTCTCGG...CTTACAAACTTGAGCTTTAGCTCTTGTTTGGGAGAACACGTAACTGTTGAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CAA 90 bp GAACCCCATAGGCACAGCATCTTTCAGCAACTTTTGACGCATTGTACTGACTTCGTACAATTTTACAAGTaGCAGCCTTCTAGCACTTCC +
Preference number: 5 (lower is better)
Translates to: EPHRHSIFQQLLTHCTDFVQFYK*QPSSTS
Trigger: GGAAGTGCTAGAAGGCTGCAACTTGTAAAATTGTAC...GAAGTCAGTACAATGCGTCAAAAGTTGCTGAAAGATGCTGTGCCTATGGGGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CAA 90 bp ACTTCTTTACTTCTTAAGCTGATGATACCCTTTTGCCCGCCCCATGTACCAGATTGGCTGAGCGGTATATaGCTACACTCTTTGACAATT +
Preference number: 5 (lower is better)
Translates to: TSLLLKLMIPFCPPHVPDWLSGI*LHSLTI
Trigger: AATTGTCAAAGAGTGTAGCAATATACCGCTCAGCCA...ATCTGGTACATGGGGCGGGCAAAAGGGTATCATCAGCTTAAGAAGTAAAGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CAA 90 bp GCCTCGTTCATAGGTGGCAATGCTGTCCATGTATTTGCATCTGGATCATACTTTTGGCTGAGCGGTATATaGCTACACTCTTTGACAATT +
Preference number: 5 (lower is better)
Translates to: ASFIGGNAVHVFASGSYFWLSGI*LHSLTI
Trigger: AATTGTCAAAGAGTGTAGCAATATACCGCTCAGCCA...AAAGTATGATCCAGATGCAAATACATGGACAGCATTGCCACCTATGAACGAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000650388.1
CDS-3UTR CAA 90 bp GAACCCCATAGGCACAGCATCTTTCAGCAACTTTTGACGCATTGTACTGACTTCACCAAAGCTACGTATTaGAATACAGCAGTCAGACAT +
Preference number: 5 (lower is better)
Translates to: EPHRHSIFQQLLTHCTDFTKATY*NTAVRH
Trigger: ATGTCTGACTGCTGTATTCAAATACGTAGCTTTGGT...GAAGTCAGTACAATGCGTCAAAAGTTGCTGAAAGATGCTGTGCCTATGGGGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
CDS-3UTR CAA 90 bp ACAGTCCAATCTAACATTTTAGGCACAAACCTTAATTTGTTGGGCAGGGTTAGGCTCCTTGGAAGGTTTTaGGAATCCCTGGTTTGGTAC +
Preference number: 5 (lower is better)
Translates to: TVQSNILGTNLNLLGRVRLLGRF*ESLVWY
Trigger: GTACCAAACCAGGGATTCCAAAAACCTTCCAAGGAG...CCTAACCCTGCCCAACAAATTAAGGTTTGTGCCTAAAATGTTAGATTGGACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CAA 90 bp GCAGTCAGACATGAGTTCCCTTCAGGGAAAATGCACCTTAGTATTTTAACTTTGACAGGCCTTAGAGAATaGTATTCCTCAAGGCCTCTG +
Preference number: 5 (lower is better)
Translates to: AVRHEFPSGKMHLSILTLTGLRE*YSSRPL
Trigger: CAGAGGCCTTGAGGAATACAATTCTCTAAGGCCTGT...CAAAGTTAAAATACTAAGGTGCATTTTCCCTGAAGGGAACTCATGTCTGACTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CAA 90 bp CACTGGGAAACTTCTATTACAAAGACTAGATTCTTAACACAGATTCGCATTCTATACCCTTCCTCCACCTaGACGGCAATCCCTAAGCTG +
Preference number: 5 (lower is better)
Translates to: HWETSITKTRFLTQIRILYPSST*TAIPKL
Trigger: CAGCTTAGGGATTGCCGTCAAGGTGGAGGAAGGGTA...TAGAATGCGAATCTGTGTTAAGAATCTAGTCTTTGTAATAGAAGTTTCCCAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CAA 90 bp CAGCTGCTGAATGCCAAGGTACTGTTCTGTACAGGACATTTCACCAAAGCAAATGCAGTCTTGGCATGTTaGGATATGTTGATTTGCATA +
Preference number: 5 (lower is better)
Translates to: QLLNAKVLFCTGHFTKANAVLAC*DMLICI
Trigger: TATGCAAATCAACATATCCAAACATGCCAAGACTGC...ATTTGCTTTGGTGAAATGTCCTGTACAGAACAGTACCTTGGCATTCAGCAGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
CDS-3UTR CAA 90 bp GCAGTCAGACATGAGTTCCCTTCAGGGAAAATGCACCTTAGTATTTTAACTTTGAAGGAATCAAGCACTTaGAAGTCCCCGATTTCACAC +
Preference number: 5 (lower is better)
Translates to: AVRHEFPSGKMHLSILTLKESST*KSPISH
Trigger: GTGTGAAATCGGGGACTTCAAAGTGCTTGATTCCTT...CAAAGTTAAAATACTAAGGTGCATTTTCCCTGAAGGGAACTCATGTCTGACTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
CDS-3UTR CAA 90 bp GAACCCCATAGGCACAGCATCTTTCAGCAACTTTTGACGCATTGTACTGACTTCAGCTCAACAACTTTGTaGAGCCAGGAAGAAATTATT +
Preference number: 5 (lower is better)
Translates to: EPHRHSIFQQLLTHCTDFSSTTL*SQEEII
Trigger: AATAATTTCTTCCTGGCTCAACAAAGTTGTTGAGCT...GAAGTCAGTACAATGCGTCAAAAGTTGCTGAAAGATGCTGTGCCTATGGGGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CAA 90 bp GAACCCCATAGGCACAGCATCTTTCAGCAACTTTTGACGCATTGTACTGACTTCTTTGTCATTCTACTATaGAAAGCAAGCCCTTTACTC +
Preference number: 5 (lower is better)
Translates to: EPHRHSIFQQLLTHCTDFFVILL*KASPLL
Trigger: GAGTAAAGGGCTTGCTTTCAATAGTAGAATGACAAA...GAAGTCAGTACAATGCGTCAAAAGTTGCTGAAAGATGCTGTGCCTATGGGGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CAA 90 bp CAGCTGCTGAATGCCAAGGTACTGTTCTGTACAGGACATTTCACCAAAGCAAATAAATCTCTAATGATCTaGATCCCGTGTTTCCCCTAT +
Preference number: 5 (lower is better)
Translates to: QLLNAKVLFCTGHFTKANKSLMI*IPCFPY
Trigger: ATAGGGGAAACACGGGATCAAGATCATTAGAGATTT...ATTTGCTTTGGTGAAATGTCCTGTACAGAACAGTACCTTGGCATTCAGCAGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CAA 90 bp CAGCTGCTGAATGCCAAGGTACTGTTCTGTACAGGACATTTCACCAAAGCAAATATGATTACGGGATGGTaGTCACAATTCACAAAAGGT +
Preference number: 5 (lower is better)
Translates to: QLLNAKVLFCTGHFTKANMITGW*SQFTKG
Trigger: ACCTTTTGTGAATTGTGACAACCATCCCGTAATCAT...ATTTGCTTTGGTGAAATGTCCTGTACAGAACAGTACCTTGGCATTCAGCAGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CAA 90 bp ACAGTCCAATCTAACATTTTAGGCACAAACCTTAATTTGTTGGGCAGGGTTAGGCTGCTTATTTTCATCTaGGCCCCCGAATACAAACAA +
Preference number: 5 (lower is better)
Translates to: TVQSNILGTNLNLLGRVRLLIFI*APEYKQ
Trigger: TTGTTTGTATTCGGGGGCCAAGATGAAAATAAGCAG...CCTAACCCTGCCCAACAAATTAAGGTTTGTGCCTAAAATGTTAGATTGGACTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
CDS-3UTR CAA 90 bp ACTTCTTTACTTCTTAAGCTGATGATACCCTTTTGCCCGCCCCATGTACCAGATACTATCCTACTGAACTaGGGGAGTACAATTTTACAA +
Preference number: 5 (lower is better)
Translates to: TSLLLKLMIPFCPPHVPDTILLN*GSTILQ
Trigger: TTGTAAAATTGTACTCCCCAAGTTCAGTAGGATAGT...ATCTGGTACATGGGGCGGGCAAAAGGGTATCATCAGCTTAAGAAGTAAAGAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CAA 90 bp TTCATAGGTGGCAATGCTGTCCATGTATTTGCATCTGGATCATACTTTTCTCCTATCTTTCAGCAACTTTaGACGCATTGTACTGACTTC +
Preference number: 5 (lower is better)
Translates to: FIGGNAVHVFASGSYFSPIFQQL*THCTDF
Trigger: GAAGTCAGTACAATGCGTCAAAAGTTGCTGAAAGAT...AGGAGAAAAGTATGATCCAGATGCAAATACATGGACAGCATTGCCACCTATGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648349.2
CDS-3UTR CAA 90 bp GCAGTCAGACATGAGTTCCCTTCAGGGAAAATGCACCTTAGTATTTTAACTTTGATGTACATCAGGCACTaGGCATTGTTTATGCTATAC +
Preference number: 5 (lower is better)
Translates to: AVRHEFPSGKMHLSILTLMYIRH*ALFMLY
Trigger: GTATAGCATAAACAATGCCAAGTGCCTGATGTACAT...CAAAGTTAAAATACTAAGGTGCATTTTCCCTGAAGGGAACTCATGTCTGACTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CAA 90 bp ACAGTCCAATCTAACATTTTAGGCACAAACCTTAATTTGTTGGGCAGGGTTAGGTGGGATGTGAATGATTaGAAATGGCCGTTCATTTAC +
Preference number: 5 (lower is better)
Translates to: TVQSNILGTNLNLLGRVRWDVND*KWPFIY
Trigger: GTAAATGAACGGCCATTTCAAATCATTCACATCCCA...CCTAACCCTGCCCAACAAATTAAGGTTTGTGCCTAAAATGTTAGATTGGACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CAA 90 bp TTTAATCCTGCTGAAGAAGAGAAACGCGAACACCAAGTAAAACTTACTATAAACCAGGGTGCTAACAGATaGTCATTGGAGGAGAAGCTT +
Preference number: 5 (lower is better)
Translates to: FNPAEEEKREHQVKLTINQGANR*SLEEKL
Trigger: AAGCTTCTCCTCCAATGACAATCTGTTAGCACCCTG...GTTTATAGTAAGTTTTACTTGGTGTTCGCGTTTCTCTTCTTCAGCAGGATTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CAA 90 bp TGTCCAGGTTTTAGAATAAATATCGTAACACTCCATGGAAATCAGCTCCTTTTCCATGGTCAAATCAGGTaGCTTTGTCCAGGTTTTAGA +
Preference number: 5 (lower is better)
Translates to: CPGFRINIVTLHGNQLLFHGQIR*LCPGFR
Trigger: TCTAAAACCTGGACAAAGCAACCTGATTTGACCATG...GAAAAGGAGCTGATTTCCATGGAGTGTTACGATATTTATTCTAAAACCTGGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000650388.1
CDS-3UTR CAA 90 bp TTTGCTTTCATTAAAAAGATCTCCACACTGTCACTACGAAAATGTGCAGACAACAGTGGAAAAGCAGTCTaGGCATGTTTGGATATGTTG +
Preference number: 5 (lower is better)
Translates to: FAFIKKISTLSLRKCADNSGKAV*ACLDML
Trigger: CAACATATCCAAACATGCCAAGACTGCTTTTCCACT...GTTGTCTGCACATTTTCGTAGTGACAGTGTGGAGATCTTTTTAATGAAAGCAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
CDS-3UTR CAA 90 bp TTTAATCCTGCTGAAGAAGAGAAACGCGAACACCAAGTAAAACTTACTATAAACTGGCACTTAGCAGCTTaGTTGGTTATTGCATCCCAT +
Preference number: 5 (lower is better)
Translates to: FNPAEEEKREHQVKLTINWHLAA*LVIASH
Trigger: ATGGGATGCAATAACCAACAAAGCTGCTAAGTGCCA...GTTTATAGTAAGTTTTACTTGGTGTTCGCGTTTCTCTTCTTCAGCAGGATTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CAA 90 bp ACAGTCCAATCTAACATTTTAGGCACAAACCTTAATTTGTTGGGCAGGGTTAGGCTCTCTTTACCACGTTaGTACAAAGAATGTATTTCC +
Preference number: 5 (lower is better)
Translates to: TVQSNILGTNLNLLGRVRLSLPR*YKECIS
Trigger: GGAAATACATTCTTTGTACAAACGTGGTAAAGAGAG...CCTAACCCTGCCCAACAAATTAAGGTTTGTGCCTAAAATGTTAGATTGGACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CAA 90 bp CAAGTGCAGTGGAAAAGCAGTCTTGGCATGTTTGGATATGTTGATTTGCATATACCTGCTTCCAAGCTTTaGTTAAAGAACAGAATGTGT +
Preference number: 5 (lower is better)
Translates to: QVQWKSSLGMFGYVDLHIPASKL*LKNRMC
Trigger: ACACATTCTGTTCTTTAACAAAAGCTTGGAAGCAGG...TATATGCAAATCAACATATCCAAACATGCCAAGACTGCTTTTCCACTGCACTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CAA 90 bp CATAATTTGTCTAAAACTCTCACTAGTGAATGCCACTGGGAAACTTCTATTACACAGTGGCTGCAAAGATaGTTCAAAACTTCTGCTGAG +
Preference number: 5 (lower is better)
Translates to: HNLSKTLTSECHWETSITQWLQR*FKTSAE
Trigger: CTCAGCAGAAGTTTTGAACAATCTTTGCAGCCACTG...TGTAATAGAAGTTTCCCAGTGGCATTCACTAGTGAGAGTTTTAGACAAATTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CAA 90 bp TTTTTCAACAGTTACGTGTTCTCCCAAACAAGAGCTAAAGCTCAAGTTTGTAAGACAAACCTTAATTTGTaGGGCAGGGTTAGGCATAAT +
Preference number: 5 (lower is better)
Translates to: FFNSYVFSQTRAKAQVCKTNLNL*GRVRHN
Trigger: ATTATGCCTAACCCTGCCCAACAAATTAAGGTTTGT...CTTACAAACTTGAGCTTTAGCTCTTGTTTGGGAGAACACGTAACTGTTGAAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000648349.2
ENST00000648994.2
CDS-3UTR CAA 90 bp CACTGGGAAACTTCTATTACAAAGACTAGATTCTTAACACAGATTCGCATTCTATTGAATTCTTCTCAATaGGCAGGGGATCAAGCACAA +
Preference number: 5 (lower is better)
Translates to: HWETSITKTRFLTQIRILLNSSQ*AGDQAQ
Trigger: TTGTGCTTGATCCCCTGCCAATTGAGAAGAATTCAA...TAGAATGCGAATCTGTGTTAAGAATCTAGTCTTTGTAATAGAAGTTTCCCAGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CAA 90 bp CATAATTTGTCTAAAACTCTCACTAGTGAATGCCACTGGGAAACTTCTATTACACGACTTCTCGGTCCTTaGTTAAATCCTACTTCTACT +
Preference number: 5 (lower is better)
Translates to: HNLSKTLTSECHWETSITRLLGP*LNPTST
Trigger: AGTAGAAGTAGGATTTAACAAAGGACCGAGAAGTCG...TGTAATAGAAGTTTCCCAGTGGCATTCACTAGTGAGAGTTTTAGACAAATTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CAA 90 bp TTTTTCAACAGTTACGTGTTCTCCCAAACAAGAGCTAAAGCTCAAGTTTGTAAGGCCCAGCACTCTTCTTaGCCTTCTATATTTTTATTC +
Preference number: 5 (lower is better)
Translates to: FFNSYVFSQTRAKAQVCKAQHSS*PSIFLF
Trigger: GAATAAAAATATAGAAGGCAAAGAAGAGTGCTGGGC...CTTACAAACTTGAGCTTTAGCTCTTGTTTGGGAGAACACGTAACTGTTGAAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS-3UTR CAA 90 bp TTTTTCAACAGTTACGTGTTCTCCCAAACAAGAGCTAAAGCTCAAGTTTGTAAGCGATCCCACAACGATTaGGAACATAGTGTGTTTTTA +
Preference number: 5 (lower is better)
Translates to: FFNSYVFSQTRAKAQVCKRSHND*EHSVFL
Trigger: TAAAAACACACTATGTTCCAAATCGTTGTGGGATCG...CTTACAAACTTGAGCTTTAGCTCTTGTTTGGGAGAACACGTAACTGTTGAAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS GCA 90 bp GACCATGTTATAAATGACAGGTACCTTTCTTATTTCTGTATCATGTaGTATCCATCGAATTACTGCTTCAAAGACATATCTTTCATTGCC +
Preference number: 5 (lower is better)
Translates to: DHVINDRYLSYFCIM*YPSNYCFKDISFIA
Trigger: GGCAATGAAAGATATGTCTTTGAAGCAGTAATTCGATGGATAGCACATGATACAGAAATAAGAAAGGTACCTGTCATTTATAACATGGTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674788.1
CDS-3UTR CAA 90 bp TTTAATCCTGCTGAAGAAGAGAAACGCGAACACCAAGTAAAACTTACTATAAACCAGAGGCCACATAGTTaGCTTTCATTAAAAAGATCT +
Preference number: 5 (lower is better)
Translates to: FNPAEEEKREHQVKLTINQRPHS*LSLKRS
Trigger: AGATCTTTTTAATGAAAGCAAACTATGTGGCCTCTG...GTTTATAGTAAGTTTTACTTGGTGTTCGCGTTTCTCTTCTTCAGCAGGATTAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648994.2
CDS GCA 72 bp CGGCACTGCCCTCAGCCATCGCGGCGCCCGCTCCTCTaGCGACGGGTCCGGCTCCCGACACCGTCCGGCCGG +
Preference number: 6 (lower is better)
Translates to: RHCPQPSRRPLL*RRVRLPTPSGR
Trigger: CCGGCCGGACGGTGTCGGGAGCCGGACCCGTCGGCAGAGGAGCGGGCGCCGCGATGGCTGAGGGCAGTGCCG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000648349.2
ENST00000648994.2
ENST00000674788.1
CDS TCA 72 bp GCGCGTCGCAGAAGCGAGACTCCTCGCGGAAAGAGCTaGGCGCTCGCAGCAGACGCGCGGCGTGCTGAGGGT +
Preference number: 6 (lower is better)
Translates to: ARRRSETPRGKS*ALAADARRAEG
Trigger: ACCCTCAGCACGCCGCGCGTCTGCTGCGAGCGCTCAGCTCTTTCCGCGAGGAGTCTCGCTTCTGCGACGCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000648349.2
ENST00000648994.2
ENST00000650388.1
ENST00000674788.1
CDS TCA 72 bp AAAGAGCTGAGCGCTCGCAGCAGACGCGCGGCGTGCTaGGGGTCAGACACGGCACTGCCCTCAGCCATCGCG +
Preference number: 6 (lower is better)
Translates to: KELSARSRRAAC*GSDTALPSAIA
Trigger: CGCGATGGCTGAGGGCAGTGCCGTGTCTGACCCTCAGCACGCCGCGCGTCTGCTGCGAGCGCTCAGCTCTTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000648349.2
ENST00000648994.2
ENST00000674788.1
CDS GCA 72 bp TTCTGCACCGGGATCTCCTCCCCGTCGAGGACCAGGTaGGCGTCGCAGAAGCGAGACTCCTCGCGGAAAGAG +
Preference number: 6 (lower is better)
Translates to: FCTGISSPSRTR*ASQKRDSSRKE
Trigger: CTCTTTCCGCGAGGAGTCTCGCTTCTGCGACGCGCACCTGGTCCTCGACGGGGAGGAGATCCCGGTGCAGAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000648349.2
ENST00000648994.2
ENST00000650388.1
ENST00000674788.1
CDS TCA 72 bp GTTTTAAGGTCCGTCAGTAGCAGCAGGTCAGCTGCCTaGACAACATCTTGGATTGTATCTTCATTTAGCCTG +
Preference number: 6 (lower is better)
Translates to: VLRSVSSSRSAA*TTSWIVSSFSL
Trigger: CAGGCTAAATGAAGATACAATCCAAGATGTTGTTCAGGCAGCTGACCTGCTGCTACTGACGGACCTTAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000648349.2
ENST00000648994.2
ENST00000674788.1