Pregenerated sensors for GALP (Homo sapiens)
Ensembl gene IDs: ENSG00000197487Ensembl transcript IDs: ENST00000357330.7, ENST00000440823.1, ENST00000590002.1
Found 73 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | CTTAGTCTCAGCATAGGGTACCTAGAAAAGGTTTCAGAGGGAGCAGGAGGAGCTTGGGAATTTTCATGCTaGGCATGCCCAGATCTCCAA | + |
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Preference number: 2 (lower is better) Translates to: LSLSIGYLEKVSEGAGGAWEFSC*ACPDLQ Trigger: TTGGAGATCTGGGCATGCTCAGCATGAAAATTCCCA...AGCTCCTCCTGCTCCCTCTGAAACCTTTTCTAGGTACCCTATGCTGAGACTAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000440823.1 |
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| 3UTR CAA 90 bp | GAACAGGGATTTGAAGACATCTATGACTTCAGGACATCTTCCTCCTaGGGAATTTTCATGCTGAGCATGCCCAGATCTCCAATCTCTGGT | + |
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Preference number: 2 (lower is better) Translates to: EQGFEDIYDFRTSSS*GIFMLSMPRSPISG Trigger: ACCAGAGATTGGAGATCTGGGCATGCTCAGCATGAAAATTCCCAAGGAGGAAGATGTCCTGAAGTCATAGATGTCTTCAAATCCCTGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000440823.1 |
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| 3UTR-3UTR TCA 90 bp | AGACACAGACTCTCAGACTTAAGAGGGTTATTTGTATTATGCAATAGCTCGTGTTGCAGGAATATTCCCTaGTTACCCCAGAATCTCCCA | + |
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Preference number: 2 (lower is better) Translates to: RHRLSDLRGLFVLCNSSCCRNIP*LPQNLP Trigger: TGGGAGATTCTGGGGTAATCAGGGAATATTCCTGCA...ACACGAGCTATTGCATAATACAAATAACCCTCTTAAGTCTGAGAGTCTGTGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000357330.7 ENST00000440823.1 |
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| 3UTR CAA 90 bp | TTCCCTGATTACCCCAGAATCTCCCAACTAGTCCTCGAATTACTATaGGTTCCATTAATAGCACATTATACTGATTTCAAGGATGAATCA | + |
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Preference number: 2 (lower is better) Translates to: FPDYPRISQLVLELL*VPLIAHYTDFKDES Trigger: TGATTCATCCTTGAAATCAGTATAATGTGCTATTAATGGAACCAATAGTAATTCGAGGACTAGTTGGGAGATTCTGGGGTAATCAGGGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000357330.7 ENST00000440823.1 |
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| 3UTR-3UTR CAA 90 bp | TTCCTCCTTGGGAATTTTCATGCTGAGCATGCCCAGATCTCCAATCTCTGGTTTTCCATCACATTCCTCTaGGAGGGCTGTGGAGGGTGG | + |
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Preference number: 3 (lower is better) Translates to: FLLGNFHAEHAQISNLWFSITFL*EGCGGW Trigger: CCACCCTCCACAGCCCTCCAAGAGGAATGTGATGGA...AAACCAGAGATTGGAGATCTGGGCATGCTCAGCATGAAAATTCCCAAGGAGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000440823.1 |
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| 3UTR CCA 72 bp | CAAACTGCCTCTCCTCACTTCTCGAGGAGACTCATGTaGGTTGAAAGAATATGGAGGAGTAAGTACGCAATT | + |
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Preference number: 3 (lower is better) Translates to: QTASPHFSRRLM*VERIWRSKYAI Trigger: AATTGCGTACTTACTCCTCCATATTCTTTCAACCCACATGAGTCTCCTCGAGAAGTGAGGAGAGGCAGTTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000357330.7 ENST00000440823.1 |
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| 3UTR-3UTR CAA 90 bp | AGACACAGACTCTCAGACTTAAGAGGGTTATTTGTATTATGCAATAGCTCGTGTGATAGGAACAGGGATTaGAAGACATCTATGACTTCA | + |
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Preference number: 3 (lower is better) Translates to: RHRLSDLRGLFVLCNSSCDRNRD*KTSMTS Trigger: TGAAGTCATAGATGTCTTCAAATCCCTGTTCCTATC...ACACGAGCTATTGCATAATACAAATAACCCTCTTAAGTCTGAGAGTCTGTGTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000440823.1 |
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| 3UTR TCA 72 bp | TGGGTTGAAAGAATATGGAGGAGTAAGTACGCAATTTaGAGAATCTTTTCAAATAAAGACACAGACTCTCAG | + |
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Preference number: 3 (lower is better) Translates to: WVERIWRSKYAI*RIFSNKDTDSQ Trigger: CTGAGAGTCTGTGTCTTTATTTGAAAAGATTCTTCAAATTGCGTACTTACTCCTCCATATTCTTTCAACCCA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000357330.7 ENST00000440823.1 |
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| CDS-3UTR CCA 90 bp | CCAATCTCTGGTTTGGCAAACGTCTCCATCACATTCCTCTTGGAGGGCTGTGGACACGCCCGCTGCAGCTaGCAGCTCTCCGCAGCTCTC | + |
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Preference number: 4 (lower is better) Translates to: PISGLANVSITFLLEGCGHARCS*QLSAAL Trigger: GAGAGCTGCGGAGAGCTGCCAGCTGCAGCGGGCGTG...TCCACAGCCCTCCAAGAGGAATGTGATGGAGACGTTTGCCAAACCAGAGATTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000440823.1 |
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| CDS-3UTR GCA 90 bp | CTTAGTCTCAGCATAGGGTACCTAGAAAAGGTTTCAGAGGGAGCAGGAGGAGCTGCGGAACACGCCCGCTaGAGCTGGCAGCTCTCCGCA | + |
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Preference number: 4 (lower is better) Translates to: LSLSIGYLEKVSEGAGGAAEHAR*SWQLSA Trigger: TGCGGAGAGCTGCCAGCTGCAGCGGGCGTGTTCCGC...AGCTCCTCCTGCTCCCTCTGAAACCTTTTCTAGGTACCCTATGCTGAGACTAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000357330.7 ENST00000440823.1 |
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| CDS-3UTR CCA 90 bp | CTTAGTCTCAGCATAGGGTACCTAGAAAAGGTTTCAGAGGGAGCAGGAGGAGCTCCTCCTCGTCCCCGGTaGGCAGGTGCGGATGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LSLSIGYLEKVSEGAGGAPPRPR*AGADAG Trigger: TCCAGCATCCGCACCTGCCCACCGGGGACGAGGAGG...AGCTCCTCCTGCTCCCTCTGAAACCTTTTCTAGGTACCCTATGCTGAGACTAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000357330.7 |
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| CDS-3UTR GCA 90 bp | CTGAGCATGCCCAGATCTCCAATCTCTGGTTTGGCAAACGTCTCCATCACATTCGTGGGCAGGTGCGGATaGTGGAGTCTCTGCCAGGCT | + |
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Preference number: 4 (lower is better) Translates to: LSMPRSPISGLANVSITFVGRCG*WSLCQA Trigger: AGCCTGGCAGAGACTCCAGCATCCGCACCTGCCCAC...GAATGTGATGGAGACGTTTGCCAAACCAGAGATTGGAGATCTGGGCATGCTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000440823.1 |
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| CDS-3UTR CCA 90 bp | TCTGGTTTGGCAAACGTCTCCATCACATTCCTCTTGGAGGGCTGTGGAGGGTGGTCTTGGTCACCCATTTaGGGAAGGTGGAGGACCGGT | + |
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Preference number: 4 (lower is better) Translates to: SGLANVSITFLLEGCGGWSWSPI*GRWRTG Trigger: ACCGGTCCTCCACCTTCCCCAAATGGGTGACCAAGA...CCACCCTCCACAGCCCTCCAAGAGGAATGTGATGGAGACGTTTGCCAAACCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000440823.1 |
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| CDS-3UTR CCA 90 bp | CTGAGCATGCCCAGATCTCCAATCTCTGGTTTGGCAAACGTCTCCATCACATTCAGGGGAGCCCGTCGATaGCCTTCCACAGGTCTAGGA | + |
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Preference number: 4 (lower is better) Translates to: LSMPRSPISGLANVSITFRGARR*PSTGLG Trigger: TCCTAGACCTGTGGAAGGCCATCGACGGGCTCCCCT...GAATGTGATGGAGACGTTTGCCAAACCAGAGATTGGAGATCTGGGCATGCTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000440823.1 |
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| CDS-3UTR CCA 90 bp | ATGCCCAGATCTCCAATCTCTGGTTTGGCAAACGTCTCCATCACATTCCTCTTGAAGGTGGAGGACCGGTaGGCAGGTGCGGATGCTGGA | + |
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Preference number: 4 (lower is better) Translates to: MPRSPISGLANVSITFLLKVEDR*AGADAG Trigger: TCCAGCATCCGCACCTGCCCACCGGTCCTCCACCTT...CAAGAGGAATGTGATGGAGACGTTTGCCAAACCAGAGATTGGAGATCTGGGCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000440823.1 |
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| CDS-3UTR GCA 90 bp | CTTAGTCTCAGCATAGGGTACCTAGAAAAGGTTTCAGAGGGAGCAGGAGGAGCTGGATGCTGGAGTCTCTaGCAGGCTCAGCAAGAGGAC | + |
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Preference number: 4 (lower is better) Translates to: LSLSIGYLEKVSEGAGGAGCWSL*QAQQED Trigger: GTCCTCTTGCTGAGCCTGGCAGAGACTCCAGCATCC...AGCTCCTCCTGCTCCCTCTGAAACCTTTTCTAGGTACCCTATGCTGAGACTAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000357330.7 ENST00000440823.1 |
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| CDS-3UTR GCA 90 bp | TTACCCCAGAATCTCCCAACTAGTCCTCGAATTACTATTGGTTCCATTAATAGCGCGGAACACGCCCGCTaGAGCTGGCAGCTCTCCGCA | + |
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Preference number: 4 (lower is better) Translates to: LPQNLPTSPRITIGSINSAEHAR*SWQLSA Trigger: TGCGGAGAGCTGCCAGCTGCAGCGGGCGTGTTCCGC...GCTATTAATGGAACCAATAGTAATTCGAGGACTAGTTGGGAGATTCTGGGGTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000357330.7 ENST00000440823.1 |
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| CDS-3UTR CCA 90 bp | TTACCCCAGAATCTCCCAACTAGTCCTCGAATTACTATTGGTTCCATTAATAGCCTCCGCAGCTCTCTCTaGCTCCTCGCTCCAGCGCCT | + |
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Preference number: 4 (lower is better) Translates to: LPQNLPTSPRITIGSINSLRSSL*LLAPAP Trigger: AGGCGCTGGAGCGAGGAGCCAGAGAGAGCTGCGGAG...GCTATTAATGGAACCAATAGTAATTCGAGGACTAGTTGGGAGATTCTGGGGTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000357330.7 |
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| CDS-3UTR CCA 90 bp | AGACACAGACTCTCAGACTTAAGAGGGTTATTTGTATTATGCAATAGCTCGTGTCACGCCCGCTGCAGCTaGCAGCTCTCCGCAGCTCTC | + |
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Preference number: 4 (lower is better) Translates to: RHRLSDLRGLFVLCNSSCHARCS*QLSAAL Trigger: GAGAGCTGCGGAGAGCTGCCAGCTGCAGCGGGCGTG...ACACGAGCTATTGCATAATACAAATAACCCTCTTAAGTCTGAGAGTCTGTGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000357330.7 ENST00000440823.1 |
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| 3UTR CAA 72 bp | TTCATGCTGAGCATGCCCAGATCTCCAATCTCTGGTTaGGCAAACGTCTCCATCACATTCCTCTTGGAGGGC | + |
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Preference number: 4 (lower is better) Translates to: FMLSMPRSPISG*ANVSITFLLEG Trigger: GCCCTCCAAGAGGAATGTGATGGAGACGTTTGCCAAACCAGAGATTGGAGATCTGGGCATGCTCAGCATGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000440823.1 |
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| CDS-3UTR GCA 90 bp | TTACCCCAGAATCTCCCAACTAGTCCTCGAATTACTATTGGTTCCATTAATAGCACAGGTGCCTACAGCTaGGGAACACGCCCGCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: LPQNLPTSPRITIGSINSTGAYS*GTRPLQ Trigger: CTGCAGCGGGCGTGTTCCGCAGCTGTAGGCACCTGT...GCTATTAATGGAACCAATAGTAATTCGAGGACTAGTTGGGAGATTCTGGGGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000357330.7 ENST00000440823.1 |
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| CDS-3UTR GCA 90 bp | TTACCCCAGAATCTCCCAACTAGTCCTCGAATTACTATTGGTTCCATTAATAGCGTGGGCAGGTGCGGATaGTGGAGTCTCTGCCAGGCT | + |
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Preference number: 4 (lower is better) Translates to: LPQNLPTSPRITIGSINSVGRCG*WSLCQA Trigger: AGCCTGGCAGAGACTCCAGCATCCGCACCTGCCCAC...GCTATTAATGGAACCAATAGTAATTCGAGGACTAGTTGGGAGATTCTGGGGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000357330.7 ENST00000440823.1 |
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| CDS-3UTR CCA 90 bp | TTACCCCAGAATCTCCCAACTAGTCCTCGAATTACTATTGGTTCCATTAATAGCGGCAGGTGCGGATGCTaGAGTCTCTGCCAGGCTCAG | + |
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Preference number: 4 (lower is better) Translates to: LPQNLPTSPRITIGSINSGRCGC*SLCQAQ Trigger: CTGAGCCTGGCAGAGACTCCAGCATCCGCACCTGCC...GCTATTAATGGAACCAATAGTAATTCGAGGACTAGTTGGGAGATTCTGGGGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000357330.7 ENST00000440823.1 |
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| CDS-3UTR TCA 90 bp | CTTAGTCTCAGCATAGGGTACCTAGAAAAGGTTTCAGAGGGAGCAGGAGGAGCTTGCAGGAATATTCCCTaGTTACCCCAGAATCTCCCA | + |
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Preference number: 4 (lower is better) Translates to: LSLSIGYLEKVSEGAGGACRNIP*LPQNLP Trigger: TGGGAGATTCTGGGGTAATCAGGGAATATTCCTGCA...AGCTCCTCCTGCTCCCTCTGAAACCTTTTCTAGGTACCCTATGCTGAGACTAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000357330.7 ENST00000440823.1 |
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| CDS-3UTR TCA 90 bp | CTGAGCATGCCCAGATCTCCAATCTCTGGTTTGGCAAACGTCTCCATCACATTCTGCAGGAATATTCCCTaGTTACCCCAGAATCTCCCA | + |
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Preference number: 4 (lower is better) Translates to: LSMPRSPISGLANVSITFCRNIP*LPQNLP Trigger: TGGGAGATTCTGGGGTAATCAGGGAATATTCCTGCA...GAATGTGATGGAGACGTTTGCCAAACCAGAGATTGGAGATCTGGGCATGCTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000440823.1 |
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| CDS-3UTR GCA 90 bp | AGACACAGACTCTCAGACTTAAGAGGGTTATTTGTATTATGCAATAGCTCGTGTACAGGTGCCTACAGCTaGGGAACACGCCCGCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: RHRLSDLRGLFVLCNSSCTGAYS*GTRPLQ Trigger: CTGCAGCGGGCGTGTTCCGCAGCTGTAGGCACCTGT...ACACGAGCTATTGCATAATACAAATAACCCTCTTAAGTCTGAGAGTCTGTGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000357330.7 ENST00000440823.1 |
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| CDS-3UTR CCA 90 bp | TTACCCCAGAATCTCCCAACTAGTCCTCGAATTACTATTGGTTCCATTAATAGCAGGGGAGCCCGTCGATaGCCTTCCACAGGTCTAGGA | + |
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Preference number: 4 (lower is better) Translates to: LPQNLPTSPRITIGSINSRGARR*PSTGLG Trigger: TCCTAGACCTGTGGAAGGCCATCGACGGGCTCCCCT...GCTATTAATGGAACCAATAGTAATTCGAGGACTAGTTGGGAGATTCTGGGGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000357330.7 ENST00000440823.1 |
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| CDS-3UTR TCA 90 bp | AGACACAGACTCTCAGACTTAAGAGGGTTATTTGTATTATGCAATAGCTCGTGTGGTAGCCAGCACTATTaGGGGTCCAGCCTCCTCGTC | + |
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Preference number: 4 (lower is better) Translates to: RHRLSDLRGLFVLCNSSCGSQHY*GSSLLV Trigger: GACGAGGAGGCTGGACCCTCAATAGTGCTGGCTACC...ACACGAGCTATTGCATAATACAAATAACCCTCTTAAGTCTGAGAGTCTGTGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000357330.7 |
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| CDS-3UTR GCA 90 bp | TTACCCCAGAATCTCCCAACTAGTCCTCGAATTACTATTGGTTCCATTAATAGCGGATGCTGGAGTCTCTaGCAGGCTCAGCAAGAGGAC | + |
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Preference number: 4 (lower is better) Translates to: LPQNLPTSPRITIGSINSGCWSL*QAQQED Trigger: GTCCTCTTGCTGAGCCTGGCAGAGACTCCAGCATCC...GCTATTAATGGAACCAATAGTAATTCGAGGACTAGTTGGGAGATTCTGGGGTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000357330.7 ENST00000440823.1 |
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| CDS-3UTR GCA 90 bp | ATTCAAATGCTTTACAATGTCTTCATGAGACCTGGGTATTTAACTTCAGGATCTTCCCCGGTGGGCAGGTaGGGATGCTGGAGTCTCTGC | + |
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Preference number: 4 (lower is better) Translates to: IQMLYNVFMRPGYLTSGSSPVGR*GCWSLC Trigger: GCAGAGACTCCAGCATCCGCACCTGCCCACCGGGGA...AGATCCTGAAGTTAAATACCCAGGTCTCATGAAGACATTGTAAAGCATTTGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000357330.7 |
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| CDS-3UTR GCA 90 bp | AATTCAAATGCTTTACAATGTCTTCATGAGACCTGGGTATTTAACTTCAGGATCGGACCGGTGGGCAGGTaGGGATGCTGGAGTCTCTGC | + |
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Preference number: 4 (lower is better) Translates to: NSNALQCLHETWVFNFRIGPVGR*GCWSLC Trigger: GCAGAGACTCCAGCATCCGCACCTGCCCACCGGTCC...GATCCTGAAGTTAAATACCCAGGTCTCATGAAGACATTGTAAAGCATTTGAATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000440823.1 |
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| CDS-3UTR CCA 90 bp | CTTAGTCTCAGCATAGGGTACCTAGAAAAGGTTTCAGAGGGAGCAGGAGGAGCTCTCCAATCTCTGGTTTaGCAAACGTCTCCATCACAT | + |
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Preference number: 4 (lower is better) Translates to: LSLSIGYLEKVSEGAGGALQSLV*QTSPSH Trigger: ATGTGATGGAGACGTTTGCCAAACCAGAGATTGGAG...AGCTCCTCCTGCTCCCTCTGAAACCTTTTCTAGGTACCCTATGCTGAGACTAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000357330.7 ENST00000440823.1 |
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| CDS-3UTR TCA 90 bp | TTCCTCCTTGGGAATTTTCATGCTGAGCATGCCCAGATCTCCAATCTCTGGTTTTGGGAATTTTCATGCTaGGCATGCCCAGATCTCCAA | + |
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Preference number: 4 (lower is better) Translates to: FLLGNFHAEHAQISNLWFWEFSC*ACPDLQ Trigger: TTGGAGATCTGGGCATGCTCAGCATGAAAATTCCCA...AAACCAGAGATTGGAGATCTGGGCATGCTCAGCATGAAAATTCCCAAGGAGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000440823.1 |
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| CDS-3UTR GCA 90 bp | CACAGACTCTCAGACTTAAGAGGGTTATTTGTATTATGCAATAGCTCGTGTTATAGGCAGGACGACAGGTaGCTACAGCTGCGGAACACG | + |
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Preference number: 4 (lower is better) Translates to: HRLSDLRGLFVLCNSSCYRQDDR*LQLRNT Trigger: CGTGTTCCGCAGCTGTAGGCACCTGTCGTCCTGCCT...ATAACACGAGCTATTGCATAATACAAATAACCCTCTTAAGTCTGAGAGTCTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000357330.7 ENST00000440823.1 |
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| CDS-3UTR CCA 90 bp | ATGCCCAGATCTCCAATCTCTGGTTTGGCAAACGTCTCCATCACATTCCTCTTGCTCCAATCTCTGGTTTaGCAAACGTCTCCATCACAT | + |
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Preference number: 4 (lower is better) Translates to: MPRSPISGLANVSITFLLLQSLV*QTSPSH Trigger: ATGTGATGGAGACGTTTGCCAAACCAGAGATTGGAG...CAAGAGGAATGTGATGGAGACGTTTGCCAAACCAGAGATTGGAGATCTGGGCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000440823.1 |
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| CDS-3UTR CCA 90 bp | ATGCCCAGATCTCCAATCTCTGGTTTGGCAAACGTCTCCATCACATTCCTCTTGCAGATCTCCAATCTCTaGTTTGGCAAACGTCTCCAT | + |
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Preference number: 4 (lower is better) Translates to: MPRSPISGLANVSITFLLQISNL*FGKRLH Trigger: ATGGAGACGTTTGCCAAACCAGAGATTGGAGATCTG...CAAGAGGAATGTGATGGAGACGTTTGCCAAACCAGAGATTGGAGATCTGGGCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000440823.1 |
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| CDS-3UTR CCA 90 bp | CCAATCTCTGGTTTGGCAAACGTCTCCATCACATTCCTCTTGGAGGGCTGTGGATGTCTTCATGAGACCTaGGTATTTAACTTCAGGATC | + |
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Preference number: 4 (lower is better) Translates to: PISGLANVSITFLLEGCGCLHET*VFNFRI Trigger: GATCCTGAAGTTAAATACCCAGGTCTCATGAAGACA...TCCACAGCCCTCCAAGAGGAATGTGATGGAGACGTTTGCCAAACCAGAGATTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000440823.1 |
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| CDS-3UTR CCA 90 bp | AATTCAAATGCTTTACAATGTCTTCATGAGACCTGGGTATTTAACTTCAGGATCCCCATTTGGGGAAGGTaGAGGACCGGTGGGCAGGTG | + |
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Preference number: 4 (lower is better) Translates to: NSNALQCLHETWVFNFRIPIWGR*RTGGQV Trigger: CACCTGCCCACCGGTCCTCCACCTTCCCCAAATGGG...GATCCTGAAGTTAAATACCCAGGTCTCATGAAGACATTGTAAAGCATTTGAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000440823.1 |
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| CDS-3UTR CCA 90 bp | ATTCAAATGCTTTACAATGTCTTCATGAGACCTGGGTATTTAACTTCAGGATCTCCCATTTGGGGAAGGTaGAGGACGGGACCCAGAAGG | + |
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Preference number: 4 (lower is better) Translates to: IQMLYNVFMRPGYLTSGSPIWGR*RTGPRR Trigger: CCTTCTGGGTCCCGTCCTCCACCTTCCCCAAATGGG...AGATCCTGAAGTTAAATACCCAGGTCTCATGAAGACATTGTAAAGCATTTGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000357330.7 |
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| CDS-3UTR CCA 90 bp | AGACACAGACTCTCAGACTTAAGAGGGTTATTTGTATTATGCAATAGCTCGTGTTCTTGGTCACCCATTTaGGGAAGGTGGAGGACGGGA | + |
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Preference number: 4 (lower is better) Translates to: RHRLSDLRGLFVLCNSSCSWSPI*GRWRTG Trigger: TCCCGTCCTCCACCTTCCCCAAATGGGTGACCAAGA...ACACGAGCTATTGCATAATACAAATAACCCTCTTAAGTCTGAGAGTCTGTGTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000357330.7 |
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| CDS-3UTR CCA 90 bp | TTACCCCAGAATCTCCCAACTAGTCCTCGAATTACTATTGGTTCCATTAATAGCTCCCTCTTTCCGTCTTaGTCACCCATTTGGGGAAGG | + |
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Preference number: 4 (lower is better) Translates to: LPQNLPTSPRITIGSINSSLFPS*SPIWGR Trigger: CCTTCCCCAAATGGGTGACCAAGACGGAAAGAGGGA...GCTATTAATGGAACCAATAGTAATTCGAGGACTAGTTGGGAGATTCTGGGGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000357330.7 ENST00000440823.1 |
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| CDS-3UTR CCA 90 bp | CACAGACTCTCAGACTTAAGAGGGTTATTTGTATTATGCAATAGCTCGTGTTATCCATCACATTCCTCTTaGAGGGCTGTGGAGGGTGGG | + |
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Preference number: 4 (lower is better) Translates to: HRLSDLRGLFVLCNSSCYPSHSS*RAVEGG Trigger: CCCACCCTCCACAGCCCTCCAAGAGGAATGTGATGG...ATAACACGAGCTATTGCATAATACAAATAACCCTCTTAAGTCTGAGAGTCTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000357330.7 ENST00000440823.1 |
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| CDS-3UTR CCA 90 bp | AATTCAAATGCTTTACAATGTCTTCATGAGACCTGGGTATTTAACTTCAGGATCCCATCACATTCCTCTTaGAGGGCTGTGGAGGGTGGG | + |
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Preference number: 4 (lower is better) Translates to: NSNALQCLHETWVFNFRIPSHSS*RAVEGG Trigger: CCCACCCTCCACAGCCCTCCAAGAGGAATGTGATGG...GATCCTGAAGTTAAATACCCAGGTCTCATGAAGACATTGTAAAGCATTTGAATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000357330.7 ENST00000440823.1 |
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| 3UTR CAA 72 bp | TTTGAAGACATCTATGACTTCAGGACATCTTCCTCCTaGGGAATTTTCATGCTGAGCATGCCCAGATCTCCA | + |
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Preference number: 4 (lower is better) Translates to: FEDIYDFRTSSS*GIFMLSMPRSP Trigger: TGGAGATCTGGGCATGCTCAGCATGAAAATTCCCAAGGAGGAAGATGTCCTGAAGTCATAGATGTCTTCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000440823.1 |
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| CDS-3UTR CCA 90 bp | CACAGACTCTCAGACTTAAGAGGGTTATTTGTATTATGCAATAGCTCGTGTTATTCCCTCTTTCCGTCTTaGTCACCCATTTGGGGAAGG | + |
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Preference number: 4 (lower is better) Translates to: HRLSDLRGLFVLCNSSCYSLFPS*SPIWGR Trigger: CCTTCCCCAAATGGGTGACCAAGACGGAAAGAGGGA...ATAACACGAGCTATTGCATAATACAAATAACCCTCTTAAGTCTGAGAGTCTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000357330.7 ENST00000440823.1 |
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| CDS-3UTR CCA 90 bp | TTCATGCTGAGCATGCCCAGATCTCCAATCTCTGGTTTGGCAAACGTCTCCATCAGCTCGTGTTATAATTaGGATGATTCCAAAAGAACA | + |
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Preference number: 4 (lower is better) Translates to: FMLSMPRSPISGLANVSISSCYN*DDSKRT Trigger: TGTTCTTTTGGAATCATCCCAATTATAACACGAGCT...GATGGAGACGTTTGCCAAACCAGAGATTGGAGATCTGGGCATGCTCAGCATGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000440823.1 |
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| CDS-3UTR TCA 90 bp | AGACACAGACTCTCAGACTTAAGAGGGTTATTTGTATTATGCAATAGCTCGTGTTGGGAATTTTCATGCTaGGCATGCCCAGATCTCCAA | + |
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Preference number: 4 (lower is better) Translates to: RHRLSDLRGLFVLCNSSCWEFSC*ACPDLQ Trigger: TTGGAGATCTGGGCATGCTCAGCATGAAAATTCCCA...ACACGAGCTATTGCATAATACAAATAACCCTCTTAAGTCTGAGAGTCTGTGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000357330.7 ENST00000440823.1 |
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| CDS-3UTR CCA 90 bp | TTACCCCAGAATCTCCCAACTAGTCCTCGAATTACTATTGGTTCCATTAATAGCTCGAGGAGACTCATGTaGGTTGAAAGAATATGGAGG | + |
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Preference number: 4 (lower is better) Translates to: LPQNLPTSPRITIGSINSSRRLM*VERIWR Trigger: CCTCCATATTCTTTCAACCCACATGAGTCTCCTCGA...GCTATTAATGGAACCAATAGTAATTCGAGGACTAGTTGGGAGATTCTGGGGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000357330.7 ENST00000440823.1 |
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| CDS-3UTR CCA 90 bp | CACAGACTCTCAGACTTAAGAGGGTTATTTGTATTATGCAATAGCTCGTGTTATCAGATCTCCAATCTCTaGTTTGGCAAACGTCTCCAT | + |
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Preference number: 4 (lower is better) Translates to: HRLSDLRGLFVLCNSSCYQISNL*FGKRLH Trigger: ATGGAGACGTTTGCCAAACCAGAGATTGGAGATCTG...ATAACACGAGCTATTGCATAATACAAATAACCCTCTTAAGTCTGAGAGTCTGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000357330.7 ENST00000440823.1 |
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| CDS-3UTR CCA 90 bp | AGACACAGACTCTCAGACTTAAGAGGGTTATTTGTATTATGCAATAGCTCGTGTTGTCTTCATGAGACCTaGGTATTTAACTTCAGGATC | + |
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Preference number: 4 (lower is better) Translates to: RHRLSDLRGLFVLCNSSCCLHET*VFNFRI Trigger: GATCCTGAAGTTAAATACCCAGGTCTCATGAAGACA...ACACGAGCTATTGCATAATACAAATAACCCTCTTAAGTCTGAGAGTCTGTGTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000357330.7 ENST00000440823.1 |
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| CDS-3UTR CCA 90 bp | ATTCAAATGCTTTACAATGTCTTCATGAGACCTGGGTATTTAACTTCAGGATCTTCGAGGAGACTCATGTaGGTTGAAAGAATATGGAGG | + |
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Preference number: 4 (lower is better) Translates to: IQMLYNVFMRPGYLTSGSSRRLM*VERIWR Trigger: CCTCCATATTCTTTCAACCCACATGAGTCTCCTCGA...AGATCCTGAAGTTAAATACCCAGGTCTCATGAAGACATTGTAAAGCATTTGAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000357330.7 ENST00000440823.1 |
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| CDS-3UTR CCA 90 bp | AGACACAGACTCTCAGACTTAAGAGGGTTATTTGTATTATGCAATAGCTCGTGTTGGGTTGAAAGAATATaGAGGAGTAAGTACGCAATT | + |
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Preference number: 4 (lower is better) Translates to: RHRLSDLRGLFVLCNSSCWVERI*RSKYAI Trigger: AATTGCGTACTTACTCCTCCATATTCTTTCAACCCA...ACACGAGCTATTGCATAATACAAATAACCCTCTTAAGTCTGAGAGTCTGTGTCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000357330.7 ENST00000440823.1 |
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| 3UTR CAA 72 bp | TACCCCAGAATCTCCCAACTAGTCCTCGAATTACTATaGGTTCCATTAATAGCACATTATACTGATTTCAAG | + |
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Preference number: 4 (lower is better) Translates to: YPRISQLVLELL*VPLIAHYTDFK Trigger: CTTGAAATCAGTATAATGTGCTATTAATGGAACCAATAGTAATTCGAGGACTAGTTGGGAGATTCTGGGGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000357330.7 ENST00000440823.1 |
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| CDS-3UTR CCA 90 bp | ATTCAAATGCTTTACAATGTCTTCATGAGACCTGGGTATTTAACTTCAGGATCTTGGGTTGAAAGAATATaGAGGAGTAAGTACGCAATT | + |
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Preference number: 4 (lower is better) Translates to: IQMLYNVFMRPGYLTSGSWVERI*RSKYAI Trigger: AATTGCGTACTTACTCCTCCATATTCTTTCAACCCA...AGATCCTGAAGTTAAATACCCAGGTCTCATGAAGACATTGTAAAGCATTTGAAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000357330.7 ENST00000440823.1 |
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| CDS-3UTR CCA 90 bp | AATTCAAATGCTTTACAATGTCTTCATGAGACCTGGGTATTTAACTTCAGGATCAGCTCGTGTTATAATTaGGATGATTCCAAAAGAACA | + |
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Preference number: 4 (lower is better) Translates to: NSNALQCLHETWVFNFRISSCYN*DDSKRT Trigger: TGTTCTTTTGGAATCATCCCAATTATAACACGAGCT...GATCCTGAAGTTAAATACCCAGGTCTCATGAAGACATTGTAAAGCATTTGAATT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000357330.7 ENST00000440823.1 |
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| CDS GCA 90 bp | GACCAGGGGGACGGAGGGAGGAGCCATCGAAGGCAGGACGACAGGTaGCTACAGCTGCGGAACACGCCCGCTGCAGCTGGCAGCTCTCCG | + |
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Preference number: 5 (lower is better) Translates to: DQGDGGRSHRRQDDR*LQLRNTPAAAGSSP Trigger: CGGAGAGCTGCCAGCTGCAGCGGGCGTGTTCCGCAGCTGTAGGCACCTGTCGTCCTGCCTTCGATGGCTCCTCCCTCCGTCCCCCTGGTC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000357330.7 ENST00000440823.1 |
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| CDS CCA 90 bp | TTCCACAGGTCTAGGATCTCAAGGGCTGTCTCCCTCTTTCCGTCTTaGTCACCCATTTGGGGAAGGTGGAGGACCGGTGGGCAGGTGCGG | + |
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Preference number: 5 (lower is better) Translates to: FHRSRISRAVSLFPS*SPIWGRWRTGGQVR Trigger: CCGCACCTGCCCACCGGTCCTCCACCTTCCCCAAATGGGTGACCAAGACGGAAAGAGGGAGACAGCCCTTGAGATCCTAGACCTGTGGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000440823.1 |
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| CDS-3UTR CAA 90 bp | CTTAGTCTCAGCATAGGGTACCTAGAAAAGGTTTCAGAGGGAGCAGGAGGAGCTTCCATCACATTCCTCTaGGAGGGCTGTGGAGGGTGG | + |
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Preference number: 5 (lower is better) Translates to: LSLSIGYLEKVSEGAGGASITFL*EGCGGW Trigger: CCACCCTCCACAGCCCTCCAAGAGGAATGTGATGGA...AGCTCCTCCTGCTCCCTCTGAAACCTTTTCTAGGTACCCTATGCTGAGACTAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000357330.7 ENST00000440823.1 |
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| CDS-3UTR CAA 90 bp | TTCCTCCTTGGGAATTTTCATGCTGAGCATGCCCAGATCTCCAATCTCTGGTTTCTCCCTCTTTCCGTCTaGGTCACCCATTTGGGGAAG | + |
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Preference number: 5 (lower is better) Translates to: FLLGNFHAEHAQISNLWFLPLSV*VTHLGK Trigger: CTTCCCCAAATGGGTGACCAAGACGGAAAGAGGGAG...AAACCAGAGATTGGAGATCTGGGCATGCTCAGCATGAAAATTCCCAAGGAGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000440823.1 |
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| CDS-3UTR CAA 90 bp | AGACACAGACTCTCAGACTTAAGAGGGTTATTTGTATTATGCAATAGCTCGTGTGTCTTGGTCACCCATTaGGGGAAGGTGGAGGACCGG | + |
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Preference number: 5 (lower is better) Translates to: RHRLSDLRGLFVLCNSSCVLVTH*GKVEDR Trigger: CCGGTCCTCCACCTTCCCCAAATGGGTGACCAAGAC...ACACGAGCTATTGCATAATACAAATAACCCTCTTAAGTCTGAGAGTCTGTGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000440823.1 |
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| CDS-3UTR CAA 90 bp | AGACACAGACTCTCAGACTTAAGAGGGTTATTTGTATTATGCAATAGCTCGTGTTCCATCACATTCCTCTaGGAGGGCTGTGGAGGGTGG | + |
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Preference number: 5 (lower is better) Translates to: RHRLSDLRGLFVLCNSSCSITFL*EGCGGW Trigger: CCACCCTCCACAGCCCTCCAAGAGGAATGTGATGGA...ACACGAGCTATTGCATAATACAAATAACCCTCTTAAGTCTGAGAGTCTGTGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000357330.7 ENST00000440823.1 |
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| CDS-3UTR CAA 90 bp | CATGCTGAGCATGCCCAGATCTCCAATCTCTGGTTTGGCAAACGTCTCCATCACGATAGGAACAGGGATTaGAAGACATCTATGACTTCA | + |
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Preference number: 5 (lower is better) Translates to: HAEHAQISNLWFGKRLHHDRNRD*KTSMTS Trigger: TGAAGTCATAGATGTCTTCAAATCCCTGTTCCTATC...GTGATGGAGACGTTTGCCAAACCAGAGATTGGAGATCTGGGCATGCTCAGCATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000440823.1 |
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| CDS-3UTR CAA 90 bp | ATTCAAATGCTTTACAATGTCTTCATGAGACCTGGGTATTTAACTTCAGGATCTGTCTTGGTCACCCATTaGGGGAAGGTGGAGGACGGG | + |
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Preference number: 5 (lower is better) Translates to: IQMLYNVFMRPGYLTSGSVLVTH*GKVEDG Trigger: CCCGTCCTCCACCTTCCCCAAATGGGTGACCAAGAC...AGATCCTGAAGTTAAATACCCAGGTCTCATGAAGACATTGTAAAGCATTTGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000357330.7 |
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| CDS-3UTR CAA 90 bp | CTTAGTCTCAGCATAGGGTACCTAGAAAAGGTTTCAGAGGGAGCAGGAGGAGCTGATAGGAACAGGGATTaGAAGACATCTATGACTTCA | + |
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Preference number: 5 (lower is better) Translates to: LSLSIGYLEKVSEGAGGADRNRD*KTSMTS Trigger: TGAAGTCATAGATGTCTTCAAATCCCTGTTCCTATC...AGCTCCTCCTGCTCCCTCTGAAACCTTTTCTAGGTACCCTATGCTGAGACTAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000357330.7 ENST00000440823.1 |
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| CDS-3UTR CAA 90 bp | ATTCAAATGCTTTACAATGTCTTCATGAGACCTGGGTATTTAACTTCAGGATCTCTCCCTCTTTCCGTCTaGGTCACCCATTTGGGGAAG | + |
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Preference number: 5 (lower is better) Translates to: IQMLYNVFMRPGYLTSGSLPLSV*VTHLGK Trigger: CTTCCCCAAATGGGTGACCAAGACGGAAAGAGGGAG...AGATCCTGAAGTTAAATACCCAGGTCTCATGAAGACATTGTAAAGCATTTGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000357330.7 ENST00000440823.1 |
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| CDS-3UTR CAA 90 bp | TTACCCCAGAATCTCCCAACTAGTCCTCGAATTACTATTGGTTCCATTAATAGCTCTCCAATCTCTGGTTaGGCAAACGTCTCCATCACA | + |
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Preference number: 5 (lower is better) Translates to: LPQNLPTSPRITIGSINSSPISG*ANVSIT Trigger: TGTGATGGAGACGTTTGCCAAACCAGAGATTGGAGA...GCTATTAATGGAACCAATAGTAATTCGAGGACTAGTTGGGAGATTCTGGGGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000357330.7 ENST00000440823.1 |
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| CDS-3UTR CAA 90 bp | ATTCAAATGCTTTACAATGTCTTCATGAGACCTGGGTATTTAACTTCAGGATCTTCTCCAATCTCTGGTTaGGCAAACGTCTCCATCACA | + |
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Preference number: 5 (lower is better) Translates to: IQMLYNVFMRPGYLTSGSSPISG*ANVSIT Trigger: TGTGATGGAGACGTTTGCCAAACCAGAGATTGGAGA...AGATCCTGAAGTTAAATACCCAGGTCTCATGAAGACATTGTAAAGCATTTGAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000357330.7 ENST00000440823.1 |
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| CDS GCA 72 bp | GACGGAGGGAGGAGCCATCGAAGGCAGGACGACAGGTaGCTACAGCTGCGGAACACGCCCGCTGCAGCTGGC | + |
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Preference number: 6 (lower is better) Translates to: DGGRSHRRQDDR*LQLRNTPAAAG Trigger: GCCAGCTGCAGCGGGCGTGTTCCGCAGCTGTAGGCACCTGTCGTCCTGCCTTCGATGGCTCCTCCCTCCGTC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000357330.7 ENST00000440823.1 |
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| CDS GCA 72 bp | GGTCCAGCCTCCTCGTCCCCGGTGGGCAGGTGCGGATaGTGGAGTCTCTGCCAGGCTCAGCAAGAGGACGAG | + |
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Preference number: 6 (lower is better) Translates to: GPASSSPVGRCG*WSLCQAQQEDE Trigger: CTCGTCCTCTTGCTGAGCCTGGCAGAGACTCCAGCATCCGCACCTGCCCACCGGGGACGAGGAGGCTGGACC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000357330.7 |
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| CDS GCA 72 bp | TTTGGGGAAGGTGGAGGACCGGTGGGCAGGTGCGGATaGTGGAGTCTCTGCCAGGCTCAGCAAGAGGACGAG | + |
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Preference number: 6 (lower is better) Translates to: FGEGGGPVGRCG*WSLCQAQQEDE Trigger: CTCGTCCTCTTGCTGAGCCTGGCAGAGACTCCAGCATCCGCACCTGCCCACCGGTCCTCCACCTTCCCCAAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000440823.1 ENST00000590002.1 |
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| CDS CCA 72 bp | AGGGCTGTCTCCCTCTTTCCGTCTTGGTCACCCATTTaGGGAAGGTGGAGGACCGGTGGGCAGGTGCGGATG | + |
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Preference number: 6 (lower is better) Translates to: RAVSLFPSWSPI*GRWRTGGQVRM Trigger: CATCCGCACCTGCCCACCGGTCCTCCACCTTCCCCAAATGGGTGACCAAGACGGAAAGAGGGAGACAGCCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000440823.1 ENST00000590002.1 |
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| CDS CAA 72 bp | AAGGGCTGTCTCCCTCTTTCCGTCTTGGTCACCCATTaGGGGAAGGTGGAGGACCGGTGGGCAGGTGCGGAT | + |
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Preference number: 6 (lower is better) Translates to: KGCLPLSVLVTH*GKVEDRWAGAD Trigger: ATCCGCACCTGCCCACCGGTCCTCCACCTTCCCCAAATGGGTGACCAAGACGGAAAGAGGGAGACAGCCCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000440823.1 ENST00000590002.1 |
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| CDS CCA 72 bp | TCTAGGATCTCAAGGGCTGTCTCCCTCTTTCCGTCTTaGTCACCCATTTGGGGAAGGTGGAGGACCGGTGGG | + |
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Preference number: 6 (lower is better) Translates to: SRISRAVSLFPS*SPIWGRWRTGG Trigger: CCCACCGGTCCTCCACCTTCCCCAAATGGGTGACCAAGACGGAAAGAGGGAGACAGCCCTTGAGATCCTAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000440823.1 |
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