RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GALNTL5 (Homo sapiens)

Ensembl gene IDs: ENSG00000106648

Ensembl transcript IDs: ENST00000392800.7, ENST00000414073.6, ENST00000416062.5, ENST00000416269.6, ENST00000426341.6, ENST00000431418.6, ENST00000448366.6, ENST00000468278.1, ENST00000482845.2, ENST00000483959.1, ENST00000616416.4

Found 370 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GACACCTGCAGGCAGAAGCAATATGAAGAAAACCATCCATCTAAATaGCTTGGATGTTGTGTCATCTCGTTCAAACACTTCTCCTTATTT +
Preference number: 1 (lower is better)
Translates to: DTCRQKQYEENHPSK*LGCCVISFKHFSLF
Trigger: AAATAAGGAGAAGTGTTTGAACGAGATGACACAACATCCAAGGCATTTAGATGGATGGTTTTCTTCATATTGCTTCTGCCTGCAGGTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414073.6
ENST00000416269.6
ENST00000426341.6
3UTR-3UTR CCA 90 bp CCAGGAACACCAGAACATCCCCTGAAGCATGAGAAGCTCCAATCAGCCTTGCTCTGGGGTCCTTGGCAATaGCATGCAGCAGGGGCTCCA +
Preference number: 2 (lower is better)
Translates to: PGTPEHPLKHEKLQSALLWGPWQ*HAAGAP
Trigger: TGGAGCCCCTGCTGCATGCCATTGCCAAGGACCCCA...GAGCAAGGCTGATTGGAGCTTCTCATGCTTCAGGGGATGTTCTGGTGTTCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000414073.6
ENST00000416269.6
ENST00000426341.6
3UTR-3UTR CCA 90 bp TTGTTTTTAGAAAGAGGCAGGGATACAGGCTGCATAGCTGCACTTGCAGGCCTGTGGGGTCCTTGGCAATaGCATGCAGCAGGGGCTCCA +
Preference number: 2 (lower is better)
Translates to: LFLERGRDTGCIAALAGLWGPWQ*HAAGAP
Trigger: TGGAGCCCCTGCTGCATGCCATTGCCAAGGACCCCA...CAGGCCTGCAAGTGCAGCTATGCAGCCTGTATCCCTGCCTCTTTCTAAAAACAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000416269.6
3UTR-3UTR TCA 90 bp GGCAGGGATACAGGCTGCATAGCTGCACTTGCAGGCCTGGGCAGCATCTCAGCTCAGTTTGTTTCTTACTaGTATGTCCTACTCGAGAGC +
Preference number: 2 (lower is better)
Translates to: GRDTGCIAALAGLGSISAQFVSY*YVLLES
Trigger: GCTCTCGAGTAGGACATATCAGTAAGAAACAAACTG...AGCTGAGATGCTGCCCAGGCCTGCAAGTGCAGCTATGCAGCCTGTATCCCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416269.6
3UTR-3UTR CCA 90 bp CTGATATGTCCTACTCGAGAGCAGGGGATTATAAAGAGTTGGCCTCCACACATCTGGGGTCCTTGGCAATaGCATGCAGCAGGGGCTCCA +
Preference number: 2 (lower is better)
Translates to: LICPTREQGIIKSWPPHIWGPWQ*HAAGAP
Trigger: TGGAGCCCCTGCTGCATGCCATTGCCAAGGACCCCA...GATGTGTGGAGGCCAACTCTTTATAATCCCCTGCTCTCGAGTAGGACATATCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
3UTR-3UTR CCA 90 bp TGGGACGCCATGAGCCAGGCCTTAACTGCAGTTGGTCTGATTCCGCTTCTTTCAAGTCGGGAGGCGGGCTaGGTAATGTTTTTGAAGACA +
Preference number: 2 (lower is better)
Translates to: WDAMSQALTAVGLIPLLSSREAG*VMFLKT
Trigger: TGTCTTCAAAAACATTACCCAGCCCGCCTCCCGACT...TGAAAGAAGCGGAATCAGACCAACTGCAGTTAAGGCCTGGCTCATGGCGTCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416269.6
3UTR-3UTR TCA 90 bp AGAAAGAGGCAGGGATACAGGCTGCATAGCTGCACTTGCAGGCCTGGGCAGCATACACTGGACATGGTCTaGAACAAGGCATTACATTCT +
Preference number: 2 (lower is better)
Translates to: RKRQGYRLHSCTCRPGQHTLDMV*NKALHS
Trigger: AGAATGTAATGCCTTGTTTCAGACCATGTCCAGTGT...ATGCTGCCCAGGCCTGCAAGTGCAGCTATGCAGCCTGTATCCCTGCCTCTTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416269.6
3UTR-3UTR TCA 90 bp GGAACACCAGAACATCCCCTGAAGCATGAGAAGCTCCAATCAGCCTTGCTCGAAACATCCCCTGAAGCATaGGAAGCTCCAATCAGCCTT +
Preference number: 2 (lower is better)
Translates to: GTPEHPLKHEKLQSALLETSPEA*EAPISL
Trigger: AAGGCTGATTGGAGCTTCTCATGCTTCAGGGGATGT...TTCGAGCAAGGCTGATTGGAGCTTCTCATGCTTCAGGGGATGTTCTGGTGTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414073.6
ENST00000416269.6
ENST00000426341.6
3UTR-3UTR CCA 90 bp GCTCCTTATATTCATCCAGCCAAACGTGCACCAGTCTTAGGTAGTTATGTGTCATGGGGTCCTTGGCAATaGCATGCAGCAGGGGCTCCA +
Preference number: 2 (lower is better)
Translates to: APYIHPAKRAPVLGSYVSWGPWQ*HAAGAP
Trigger: TGGAGCCCCTGCTGCATGCCATTGCCAAGGACCCCA...TGACACATAACTACCTAAGACTGGTGCACGTTTGGCTGGATGAATATAAGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
3UTR-3UTR TCA 90 bp CCAGGAACACCAGAACATCCCCTGAAGCATGAGAAGCTCCAATCAGCCTTGCTCGAGTTCTATCATCAATaGCATCTATCAGGGGGCACA +
Preference number: 2 (lower is better)
Translates to: PGTPEHPLKHEKLQSALLEFYHQ*HLSGGT
Trigger: TGTGCCCCCTGATAGATGTCATTGATGATAGAACTC...GAGCAAGGCTGATTGGAGCTTCTCATGCTTCAGGGGATGTTCTGGTGTTCCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414073.6
ENST00000416269.6
ENST00000426341.6
3UTR-3UTR TCA 90 bp AAGAGGAGAGGGCTTATACTCCAGAGTTCTATCATCAATGACATCTATCAGGGGGGGTCAGGGGCAGGTTaGACAGGAACAGGTTCATGG +
Preference number: 2 (lower is better)
Translates to: KRRGLILQSSIINDIYQGGSGAG*TGTGSW
Trigger: CCATGAACCTGTTCCTGTTCAACCTGCCCCTGACCC...CCCCTGATAGATGTCATTGATGATAGAACTCTGGAGTATAAGCCCTCTCCTCTT
50% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000414073.6
ENST00000416269.6
3UTR-3UTR GCA 90 bp CTTATACTCCAGAGTTCTATCATCAATGACATCTATCAGGGGGCACACCACCATGGCAGGGATACAGGCTaGATAGCTGCACTTGCAGGC +
Preference number: 2 (lower is better)
Translates to: LILQSSIINDIYQGAHHHGRDTG*IAALAG
Trigger: GCCTGCAAGTGCAGCTATGCAGCCTGTATCCCTGCC...ATGGTGGTGTGCCCCCTGATAGATGTCATTGATGATAGAACTCTGGAGTATAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416269.6
3UTR-3UTR CCA 90 bp GGAACACCAGAACATCCCCTGAAGCATGAGAAGCTCCAATCAGCCTTGCTCGAAGGCCTTAACTGCAGTTaGTCTGATTCCGCTTCTTTC +
Preference number: 2 (lower is better)
Translates to: GTPEHPLKHEKLQSALLEGLNCS*SDSASF
Trigger: GAAAGAAGCGGAATCAGACCAACTGCAGTTAAGGCC...TTCGAGCAAGGCTGATTGGAGCTTCTCATGCTTCAGGGGATGTTCTGGTGTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416269.6
3UTR CAA 90 bp GCAAATGACAATGCTGGCAGTCGGGAGGCGGGCTGGGTAATGTTTTaGAAGACACCTGCAGGCAGAAGCAATATGAAGAAAACCATCCAT +
Preference number: 2 (lower is better)
Translates to: ANDNAGSREAGWVMF*KTPAGRSNMKKTIH
Trigger: ATGGATGGTTTTCTTCATATTGCTTCTGCCTGCAGGTGTCTTCAAAAACATTACCCAGCCCGCCTCCCGACTGCCAGCATTGTCATTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414073.6
ENST00000416269.6
ENST00000426341.6
3UTR-3UTR GCA 90 bp AGAGGAGAGGGCTTATACTCCAGAGTTCTATCATCAATGACATCTATCAGGGGGGAGCCAGGCCTTAACTaGAGTTGGTCTGATTCCGCT +
Preference number: 2 (lower is better)
Translates to: RGEGLYSRVLSSMTSIRGEPGLN*SWSDSA
Trigger: AGCGGAATCAGACCAACTGCAGTTAAGGCCTGGCTC...CCCCCTGATAGATGTCATTGATGATAGAACTCTGGAGTATAAGCCCTCTCCTCT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000416269.6
3UTR-3UTR CCA 90 bp CCCCTTACAAGAGGAGAGGGCTTATACTCCAGAGTTCTATCATCAATGACATCTCCATTTTGGGGTCCTTaGCAATGGCATGCAGCAGGG +
Preference number: 2 (lower is better)
Translates to: PLTRGEGLYSRVLSSMTSPFWGP*QWHAAG
Trigger: CCCTGCTGCATGCCATTGCCAAGGACCCCAAAATGG...AGATGTCATTGATGATAGAACTCTGGAGTATAAGCCCTCTCCTCTTGTAAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
3UTR-3UTR CCA 90 bp CTTACTGATATGTCCTACTCGAGAGCAGGGGATTATAAAGAGTTGGCCTCCACAGGCACACCACCATTTTaGGGTCCTTGGCAATGGCAT +
Preference number: 2 (lower is better)
Translates to: LTDMSYSRAGDYKELASTGTPPF*GPWQWH
Trigger: ATGCCATTGCCAAGGACCCCAAAATGGTGGTGTGCC...TGTGGAGGCCAACTCTTTATAATCCCCTGCTCTCGAGTAGGACATATCAGTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
3UTR-3UTR GCA 90 bp GCTCCTTATATTCATCCAGCCAAACGTGCACCAGTCTTAGGTAGTTATGTGTCACAGGCTGTTCACAGATaGCTCCAACTCTGGGAAGAC +
Preference number: 2 (lower is better)
Translates to: APYIHPAKRAPVLGSYVSQAVHR*LQLWED
Trigger: GTCTTCCCAGAGTTGGAGGCATCTGTGAACAGCCTG...TGACACATAACTACCTAAGACTGGTGCACGTTTGGCTGGATGAATATAAGGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
3UTR-3UTR GCA 90 bp TCCCCTTACAAGAGGAGAGGGCTTATACTCCAGAGTTCTATCATCAATGACATCAGCTCCAATCAGCCTTaGTCGAATCAGCCCCTCTCT +
Preference number: 2 (lower is better)
Translates to: SPYKRRGLILQSSIINDISSNQP*SNQPLS
Trigger: AGAGAGGGGCTGATTCGAGCAAGGCTGATTGGAGCT...GATGTCATTGATGATAGAACTCTGGAGTATAAGCCCTCTCCTCTTGTAAGGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414073.6
ENST00000416269.6
ENST00000426341.6
3UTR-3UTR GCA 90 bp AATCAAAAGTTCCCCTTACAAGAGGAGAGGGCTTATACTCCAGAGTTCTATCATTACAGGCTGCATAGCTaGACTTGCAGGCCTGGGCAG +
Preference number: 2 (lower is better)
Translates to: NQKFPLQEERAYTPEFYHYRLHS*TCRPGQ
Trigger: CTGCCCAGGCCTGCAAGTGCAGCTATGCAGCCTGTA...ATGATAGAACTCTGGAGTATAAGCCCTCTCCTCTTGTAAGGGGAACTTTTGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416269.6
3UTR-3UTR CCA 90 bp CCCCTTACAAGAGGAGAGGGCTTATACTCCAGAGTTCTATCATCAATGACATCTGGCACACCACCATTTTaGGGTCCTTGGCAATGGCAT +
Preference number: 2 (lower is better)
Translates to: PLTRGEGLYSRVLSSMTSGTPPF*GPWQWH
Trigger: ATGCCATTGCCAAGGACCCCAAAATGGTGGTGTGCC...AGATGTCATTGATGATAGAACTCTGGAGTATAAGCCCTCTCCTCTTGTAAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
3UTR-3UTR CCA 90 bp GGAACACCAGAACATCCCCTGAAGCATGAGAAGCTCCAATCAGCCTTGCTCGAATTCAAGAAAATAGTGTaGCGTGAGGTTCGTGACACT +
Preference number: 2 (lower is better)
Translates to: GTPEHPLKHEKLQSALLEFKKIV*REVRDT
Trigger: AGTGTCACGAACCTCACGCCACACTATTTTCTTGAA...TTCGAGCAAGGCTGATTGGAGCTTCTCATGCTTCAGGGGATGTTCTGGTGTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414073.6
ENST00000416269.6
ENST00000426341.6
3UTR-3UTR GCA 90 bp TTATACTCCAGAGTTCTATCATCAATGACATCTATCAGGGGGCACACCACCATTCAGGCTGTTCACAGATaGCTCCAACTCTGGGAAGAC +
Preference number: 2 (lower is better)
Translates to: LYSRVLSSMTSIRGHTTIQAVHR*LQLWED
Trigger: GTCTTCCCAGAGTTGGAGGCATCTGTGAACAGCCTG...AATGGTGGTGTGCCCCCTGATAGATGTCATTGATGATAGAACTCTGGAGTATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
3UTR-3UTR CCA 90 bp TTATACTCCAGAGTTCTATCATCAATGACATCTATCAGGGGGCACACCACCATTGGCACACCACCATTTTaGGGTCCTTGGCAATGGCAT +
Preference number: 2 (lower is better)
Translates to: LYSRVLSSMTSIRGHTTIGTPPF*GPWQWH
Trigger: ATGCCATTGCCAAGGACCCCAAAATGGTGGTGTGCC...AATGGTGGTGTGCCCCCTGATAGATGTCATTGATGATAGAACTCTGGAGTATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
3UTR-3UTR TCA 90 bp CTTACTGATATGTCCTACTCGAGAGCAGGGGATTATAAAGAGTTGGCCTCCACAGAGTTCTATCATCAATaGCATCTATCAGGGGGCACA +
Preference number: 2 (lower is better)
Translates to: LTDMSYSRAGDYKELASTEFYHQ*HLSGGT
Trigger: TGTGCCCCCTGATAGATGTCATTGATGATAGAACTC...TGTGGAGGCCAACTCTTTATAATCCCCTGCTCTCGAGTAGGACATATCAGTAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
3UTR-3UTR GCA 90 bp GGTTTTCCAGTTTGTTTCTTACTGATATGTCCTACTCGAGAGCAGGGGATTATAAGCTCCAATCAGCCTTaGTCGAATCAGCCCCTCTCT +
Preference number: 2 (lower is better)
Translates to: GFPVCFLLICPTREQGIISSNQP*SNQPLS
Trigger: AGAGAGGGGCTGATTCGAGCAAGGCTGATTGGAGCT...TATAATCCCCTGCTCTCGAGTAGGACATATCAGTAAGAAACAAACTGGAAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000414073.6
ENST00000416269.6
ENST00000426341.6
3UTR-3UTR CCA 90 bp TTATACTCCAGAGTTCTATCATCAATGACATCTATCAGGGGGCACACCACCATTAGTCGGGAGGCGGGCTaGGTAATGTTTTTGAAGACA +
Preference number: 2 (lower is better)
Translates to: LYSRVLSSMTSIRGHTTISREAG*VMFLKT
Trigger: TGTCTTCAAAAACATTACCCAGCCCGCCTCCCGACT...AATGGTGGTGTGCCCCCTGATAGATGTCATTGATGATAGAACTCTGGAGTATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000414073.6
ENST00000416269.6
ENST00000426341.6
3UTR-3UTR TCA 90 bp GTGTGGCGTGAGGTTCGTGACACTGGACATGGTCTGAAACAAGGCATTACATTCCTTGTGACACTATGTTaGATGACTAGGAGACTTTTA +
Preference number: 2 (lower is better)
Translates to: VWREVRDTGHGLKQGITFLVTLC*MTRRLL
Trigger: TAAAAGTCTCCTAGTCATTCAACATAGTGTCACAAG...GAATGTAATGCCTTGTTTCAGACCATGTCCAGTGTCACGAACCTCACGCCACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414073.6
ENST00000416269.6
3UTR-3UTR TCA 90 bp TCCCCTTACAAGAGGAGAGGGCTTATACTCCAGAGTTCTATCATCAATGACATCGAGTTCTATCATCAATaGCATCTATCAGGGGGCACA +
Preference number: 2 (lower is better)
Translates to: SPYKRRGLILQSSIINDIEFYHQ*HLSGGT
Trigger: TGTGCCCCCTGATAGATGTCATTGATGATAGAACTC...GATGTCATTGATGATAGAACTCTGGAGTATAAGCCCTCTCCTCTTGTAAGGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
3UTR-3UTR GCA 90 bp CTGATATGTCCTACTCGAGAGCAGGGGATTATAAAGAGTTGGCCTCCACACATCAACCATCCATCTAAATaGCTTGGATGTTGTGTCATC +
Preference number: 2 (lower is better)
Translates to: LICPTREQGIIKSWPPHINHPSK*LGCCVI
Trigger: GATGACACAACATCCAAGGCATTTAGATGGATGGTT...GATGTGTGGAGGCCAACTCTTTATAATCCCCTGCTCTCGAGTAGGACATATCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414073.6
ENST00000416269.6
ENST00000426341.6
3UTR-3UTR CCA 90 bp AGGTTTTCCAGTTTGTTTCTTACTGATATGTCCTACTCGAGAGCAGGGGATTATAGTCGGGAGGCGGGCTaGGTAATGTTTTTGAAGACA +
Preference number: 2 (lower is better)
Translates to: RFSSLFLTDMSYSRAGDYSREAG*VMFLKT
Trigger: TGTCTTCAAAAACATTACCCAGCCCGCCTCCCGACT...ATAATCCCCTGCTCTCGAGTAGGACATATCAGTAAGAAACAAACTGGAAAACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000414073.6
ENST00000416269.6
ENST00000426341.6
3UTR-3UTR TCA 90 bp CTTATACTCCAGAGTTCTATCATCAATGACATCTATCAGGGGGCACACCACCATCAGTTTGTTTCTTACTaGTATGTCCTACTCGAGAGC +
Preference number: 2 (lower is better)
Translates to: LILQSSIINDIYQGAHHHQFVSY*YVLLES
Trigger: GCTCTCGAGTAGGACATATCAGTAAGAAACAAACTG...ATGGTGGTGTGCCCCCTGATAGATGTCATTGATGATAGAACTCTGGAGTATAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
3UTR-3UTR TCA 90 bp TCCCCTTACAAGAGGAGAGGGCTTATACTCCAGAGTTCTATCATCAATGACATCCAGTTTGTTTCTTACTaGTATGTCCTACTCGAGAGC +
Preference number: 2 (lower is better)
Translates to: SPYKRRGLILQSSIINDIQFVSY*YVLLES
Trigger: GCTCTCGAGTAGGACATATCAGTAAGAAACAAACTG...GATGTCATTGATGATAGAACTCTGGAGTATAAGCCCTCTCCTCTTGTAAGGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
3UTR-3UTR TCA 90 bp GCTCCTTATATTCATCCAGCCAAACGTGCACCAGTCTTAGGTAGTTATGTGTCAGAATATTTCCGTAGGTaGCATATTTCAGACCAGGCT +
Preference number: 2 (lower is better)
Translates to: APYIHPAKRAPVLGSYVSEYFRR*HISDQA
Trigger: AGCCTGGTCTGAAATATGTCACCTACGGAAATATTC...TGACACATAACTACCTAAGACTGGTGCACGTTTGGCTGGATGAATATAAGGAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
3UTR-3UTR TCA 90 bp CTTATACTCCAGAGTTCTATCATCAATGACATCTATCAGGGGGCACACCACCATCAAATACCACTGAAATaGCTTGCAACCCAGTCGTTT +
Preference number: 2 (lower is better)
Translates to: LILQSSIINDIYQGAHHHQIPLK*LATQSF
Trigger: AAACGACTGGGTTGCAAGTCATTTCAGTGGTATTTG...ATGGTGGTGTGCCCCCTGATAGATGTCATTGATGATAGAACTCTGGAGTATAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
3UTR-3UTR GCA 90 bp GCTCCTTATATTCATCCAGCCAAACGTGCACCAGTCTTAGGTAGTTATGTGTCAACCACTGAAATGACTTaGAACCCAGTCGTTTCCTTA +
Preference number: 2 (lower is better)
Translates to: APYIHPAKRAPVLGSYVSTTEMT*NPVVSL
Trigger: TAAGGAAACGACTGGGTTGCAAGTCATTTCAGTGGT...TGACACATAACTACCTAAGACTGGTGCACGTTTGGCTGGATGAATATAAGGAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
3UTR-3UTR TCA 90 bp GCAGAAGGAGGGATCTTCTTCTTAACTGCAGTTGGTCTGATTCCGCTTCTTTCACTTGTGACACTATGTTaGATGACTAGGAGACTTTTA +
Preference number: 2 (lower is better)
Translates to: AEGGIFFLTAVGLIPLLSLVTLC*MTRRLL
Trigger: TAAAAGTCTCCTAGTCATTCAACATAGTGTCACAAG...TGAAAGAAGCGGAATCAGACCAACTGCAGTTAAGAAGAAGATCCCTCCTTCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414073.6
3UTR-3UTR TCA 90 bp TTATACTCCAGAGTTCTATCATCAATGACATCTATCAGGGGGCACACCACCATTCAGTTTGTTTCTTACTaGTATGTCCTACTCGAGAGC +
Preference number: 2 (lower is better)
Translates to: LYSRVLSSMTSIRGHTTIQFVSY*YVLLES
Trigger: GCTCTCGAGTAGGACATATCAGTAAGAAACAAACTG...AATGGTGGTGTGCCCCCTGATAGATGTCATTGATGATAGAACTCTGGAGTATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
3UTR-3UTR GCA 90 bp CGACGTATAGCAAAAATTCCTCCAGACATTGCAGGTGACCGGATTGGTTTAGTAAACCATCCATCTAAATaGCTTGGATGTTGTGTCATC +
Preference number: 2 (lower is better)
Translates to: RRIAKIPPDIAGDRIGLVNHPSK*LGCCVI
Trigger: GATGACACAACATCCAAGGCATTTAGATGGATGGTT...TACTAAACCAATCCGGTCACCTGCAATGTCTGGAGGAATTTTTGCTATACGTCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414073.6
ENST00000416269.6
ENST00000426341.6
3UTR-3UTR CCA 90 bp CTTATACTCCAGAGTTCTATCATCAATGACATCTATCAGGGGGCACACCACCATAGATGCCTCCAACTCTaGGAAGACATTATCCAAATA +
Preference number: 2 (lower is better)
Translates to: LILQSSIINDIYQGAHHHRCLQL*EDIIQI
Trigger: TATTTGGATAATGTCTTCCCAGAGTTGGAGGCATCT...ATGGTGGTGTGCCCCCTGATAGATGTCATTGATGATAGAACTCTGGAGTATAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
3UTR CAA 90 bp CCTGCAGGCAGAAGCAATATGAAGAAAACCATCCATCTAAATGCCTaGGATGTTGTGTCATCTCGTTCAAACACTTCTCCTTATTTGCAT +
Preference number: 2 (lower is better)
Translates to: PAGRSNMKKTIHLNA*DVVSSRSNTSPYLH
Trigger: ATGCAAATAAGGAGAAGTGTTTGAACGAGATGACACAACATCCAAGGCATTTAGATGGATGGTTTTCTTCATATTGCTTCTGCCTGCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414073.6
ENST00000416269.6
ENST00000426341.6
3UTR-3UTR TCA 90 bp AATCAAAAGTTCCCCTTACAAGAGGAGAGGGCTTATACTCCAGAGTTCTATCATGAATATTTCCGTAGGTaGCATATTTCAGACCAGGCT +
Preference number: 2 (lower is better)
Translates to: NQKFPLQEERAYTPEFYHEYFRR*HISDQA
Trigger: AGCCTGGTCTGAAATATGTCACCTACGGAAATATTC...ATGATAGAACTCTGGAGTATAAGCCCTCTCCTCTTGTAAGGGGAACTTTTGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
3UTR-3UTR GCA 90 bp CTTACTGATATGTCCTACTCGAGAGCAGGGGATTATAAAGAGTTGGCCTCCACAATCATCTCATTTTCCTaGATTAAGCCCTTAATAGCT +
Preference number: 2 (lower is better)
Translates to: LTDMSYSRAGDYKELASTIISFS*IKPLIA
Trigger: AGCTATTAAGGGCTTAATGCAGGAAAATGAGATGAT...TGTGGAGGCCAACTCTTTATAATCCCCTGCTCTCGAGTAGGACATATCAGTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414073.6
ENST00000416269.6
3UTR CAA 90 bp GTAGTTATGTGTCATAGCACTGATGATTGTAGAAGGTTTTCCAGTTaGTTTCTTACTGATATGTCCTACTCGAGAGCAGGGGATTATAAA +
Preference number: 2 (lower is better)
Translates to: VVMCHSTDDCRRFSS*FLTDMSYSRAGDYK
Trigger: TTTATAATCCCCTGCTCTCGAGTAGGACATATCAGTAAGAAACAAACTGGAAAACCTTCTACAATCATCAGTGCTATGACACATAACTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
3UTR-3UTR GCA 90 bp GGTTTTCCAGTTTGTTTCTTACTGATATGTCCTACTCGAGAGCAGGGGATTATAATCATCTCATTTTCCTaGATTAAGCCCTTAATAGCT +
Preference number: 2 (lower is better)
Translates to: GFPVCFLLICPTREQGIIIISFS*IKPLIA
Trigger: AGCTATTAAGGGCTTAATGCAGGAAAATGAGATGAT...TATAATCCCCTGCTCTCGAGTAGGACATATCAGTAAGAAACAAACTGGAAAACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000414073.6
ENST00000416269.6
3UTR-3UTR CAA 90 bp CCAGGAACACCAGAACATCCCCTGAAGCATGAGAAGCTCCAATCAGCCTTGCTCAAGCTCCAATCAGCCTaGCTCGAATCAGCCCCTCTC +
Preference number: 3 (lower is better)
Translates to: PGTPEHPLKHEKLQSALLKLQSA*LESAPL
Trigger: GAGAGGGGCTGATTCGAGCAAGGCTGATTGGAGCTT...GAGCAAGGCTGATTGGAGCTTCTCATGCTTCAGGGGATGTTCTGGTGTTCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414073.6
ENST00000416269.6
ENST00000426341.6
3UTR CCA 72 bp GAAGCAAATGACAATGCTGGCAGTCGGGAGGCGGGCTaGGTAATGTTTTTGAAGACACCTGCAGGCAGAAGC +
Preference number: 3 (lower is better)
Translates to: EANDNAGSREAG*VMFLKTPAGRS
Trigger: GCTTCTGCCTGCAGGTGTCTTCAAAAACATTACCCAGCCCGCCTCCCGACTGCCAGCATTGTCATTTGCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414073.6
ENST00000416269.6
ENST00000426341.6
3UTR GCA 72 bp TCTTCCTTGTTTTTAGAAAGAGGCAGGGATACAGGCTaGATAGCTGCACTTGCAGGCCTGGGCAGCATCTCA +
Preference number: 3 (lower is better)
Translates to: SSLFLERGRDTG*IAALAGLGSIS
Trigger: TGAGATGCTGCCCAGGCCTGCAAGTGCAGCTATGCAGCCTGTATCCCTGCCTCTTTCTAAAAACAAGGAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416269.6
3UTR-3UTR CAA 90 bp TTATACTCCAGAGTTCTATCATCAATGACATCTATCAGGGGGCACACCACCATTGGGCACACCACCATTTaGGGGTCCTTGGCAATGGCA +
Preference number: 3 (lower is better)
Translates to: LYSRVLSSMTSIRGHTTIGHTTI*GSLAMA
Trigger: TGCCATTGCCAAGGACCCCAAAATGGTGGTGTGCCC...AATGGTGGTGTGCCCCCTGATAGATGTCATTGATGATAGAACTCTGGAGTATAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
3UTR-3UTR CAA 90 bp CCCCTTACAAGAGGAGAGGGCTTATACTCCAGAGTTCTATCATCAATGACATCTAAGCTCCAATCAGCCTaGCTCGAATCAGCCCCTCTC +
Preference number: 3 (lower is better)
Translates to: PLTRGEGLYSRVLSSMTSKLQSA*LESAPL
Trigger: GAGAGGGGCTGATTCGAGCAAGGCTGATTGGAGCTT...AGATGTCATTGATGATAGAACTCTGGAGTATAAGCCCTCTCCTCTTGTAAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414073.6
ENST00000416269.6
ENST00000426341.6
3UTR-3UTR CAA 90 bp AATCAAAAGTTCCCCTTACAAGAGGAGAGGGCTTATACTCCAGAGTTCTATCATGGGCACACCACCATTTaGGGGTCCTTGGCAATGGCA +
Preference number: 3 (lower is better)
Translates to: NQKFPLQEERAYTPEFYHGHTTI*GSLAMA
Trigger: TGCCATTGCCAAGGACCCCAAAATGGTGGTGTGCCC...ATGATAGAACTCTGGAGTATAAGCCCTCTCCTCTTGTAAGGGGAACTTTTGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
3UTR-3UTR CAA 90 bp GGAACACCAGAACATCCCCTGAAGCATGAGAAGCTCCAATCAGCCTTGCTCGAAATCCATCTAAATGCCTaGGATGTTGTGTCATCTCGT +
Preference number: 3 (lower is better)
Translates to: GTPEHPLKHEKLQSALLEIHLNA*DVVSSR
Trigger: ACGAGATGACACAACATCCAAGGCATTTAGATGGAT...TTCGAGCAAGGCTGATTGGAGCTTCTCATGCTTCAGGGGATGTTCTGGTGTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414073.6
ENST00000416269.6
ENST00000426341.6
3UTR-3UTR CAA 90 bp AGAGGAGAGGGCTTATACTCCAGAGTTCTATCATCAATGACATCTATCAGGGGGAAATTCCTCCAGACATaGCAGGTGACCGGATTGGTT +
Preference number: 3 (lower is better)
Translates to: RGEGLYSRVLSSMTSIRGKFLQT*QVTGLV
Trigger: AACCAATCCGGTCACCTGCAATGTCTGGAGGAATTT...CCCCCTGATAGATGTCATTGATGATAGAACTCTGGAGTATAAGCCCTCTCCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
3UTR-3UTR CAA 90 bp AGAGGAGAGGGCTTATACTCCAGAGTTCTATCATCAATGACATCTATCAGGGGGGGGGATTATAAAGAGTaGGCCTCCACACATCCAGAT +
Preference number: 3 (lower is better)
Translates to: RGEGLYSRVLSSMTSIRGGDYKE*ASTHPD
Trigger: ATCTGGATGTGTGGAGGCCAACTCTTTATAATCCCC...CCCCCTGATAGATGTCATTGATGATAGAACTCTGGAGTATAAGCCCTCTCCTCT
47% GC, longest homopolymer 9 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
3UTR-3UTR CAA 90 bp GCCATGAGCCAGGCCTTAACTGCAGTTGGTCTGATTCCGCTTCTTTCATGGAATATCCATCTAAATGCCTaGGATGTTGTGTCATCTCGT +
Preference number: 3 (lower is better)
Translates to: AMSQALTAVGLIPLLSWNIHLNA*DVVSSR
Trigger: ACGAGATGACACAACATCCAAGGCATTTAGATGGAT...ATTCCATGAAAGAAGCGGAATCAGACCAACTGCAGTTAAGGCCTGGCTCATGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416269.6
3UTR-3UTR CAA 90 bp AGTTGGCCTCCACACATCCAGATCCTTAGTGAAAGTTCCAAATTTTCTCTTCCCGGGGATTATAAAGAGTaGGCCTCCACACATCCAGAT +
Preference number: 3 (lower is better)
Translates to: SWPPHIQILSESSKFSLPGDYKE*ASTHPD
Trigger: ATCTGGATGTGTGGAGGCCAACTCTTTATAATCCCC...GGGAAGAGAAAATTTGGAACTTTCACTAAGGATCTGGATGTGTGGAGGCCAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
3UTR-3UTR CAA 90 bp TTATACTCCAGAGTTCTATCATCAATGACATCTATCAGGGGGCACACCACCATTAAATTCCTCCAGACATaGCAGGTGACCGGATTGGTT +
Preference number: 3 (lower is better)
Translates to: LYSRVLSSMTSIRGHTTIKFLQT*QVTGLV
Trigger: AACCAATCCGGTCACCTGCAATGTCTGGAGGAATTT...AATGGTGGTGTGCCCCCTGATAGATGTCATTGATGATAGAACTCTGGAGTATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
3UTR-3UTR CAA 90 bp GGTTTTCCAGTTTGTTTCTTACTGATATGTCCTACTCGAGAGCAGGGGATTATAAAATTCCTCCAGACATaGCAGGTGACCGGATTGGTT +
Preference number: 3 (lower is better)
Translates to: GFPVCFLLICPTREQGIIKFLQT*QVTGLV
Trigger: AACCAATCCGGTCACCTGCAATGTCTGGAGGAATTT...TATAATCCCCTGCTCTCGAGTAGGACATATCAGTAAGAAACAAACTGGAAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
3UTR-3UTR CAA 90 bp AGGTTTTCCAGTTTGTTTCTTACTGATATGTCCTACTCGAGAGCAGGGGATTATATCCATCTAAATGCCTaGGATGTTGTGTCATCTCGT +
Preference number: 3 (lower is better)
Translates to: RFSSLFLTDMSYSRAGDYIHLNA*DVVSSR
Trigger: ACGAGATGACACAACATCCAAGGCATTTAGATGGAT...ATAATCCCCTGCTCTCGAGTAGGACATATCAGTAAGAAACAAACTGGAAAACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414073.6
ENST00000416269.6
ENST00000426341.6
3UTR-3UTR CAA 90 bp GGTTTTCCAGTTTGTTTCTTACTGATATGTCCTACTCGAGAGCAGGGGATTATACTCCTCATAGCAACTTaGCTCATGTCATCTACCAAA +
Preference number: 3 (lower is better)
Translates to: GFPVCFLLICPTREQGIILLIAT*LMSSTK
Trigger: TTTGGTAGATGACATGAGCAAAGTTGCTATGAGGAG...TATAATCCCCTGCTCTCGAGTAGGACATATCAGTAAGAAACAAACTGGAAAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414073.6
ENST00000416269.6
CDS-3UTR GCA 90 bp GATCTCCAGACACCTCACTCACATCCAGGATGTAGGAGGCAGCAAGAGGAGGGATACAGGCTGCATAGCTaGACTTGCAGGCCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: DLQTPHSHPGCRRQQEEGYRLHS*TCRPGQ
Trigger: CTGCCCAGGCCTGCAAGTGCAGCTATGCAGCCTGTA...TCCCTCCTCTTGCTGCCTCCTACATCCTGGATGTGAGTGAGGTGTCTGGAGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416269.6
CDS-3UTR CCA 90 bp GGCAGGGATACAGGCTGCATAGCTGCACTTGCAGGCCTGGGCAGCATCTCAGCTAGTCGGGAGGCGGGCTaGGTAATGTTTTTGAAGACA +
Preference number: 4 (lower is better)
Translates to: GRDTGCIAALAGLGSISASREAG*VMFLKT
Trigger: TGTCTTCAAAAACATTACCCAGCCCGCCTCCCGACT...AGCTGAGATGCTGCCCAGGCCTGCAAGTGCAGCTATGCAGCCTGTATCCCTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416269.6
CDS-3UTR TCA 90 bp CCAGGAACACCAGAACATCCCCTGAAGCATGAGAAGCTCCAATCAGCCTTGCTCAGAGTCACAGCTGAATaGGGCAGGGGTCTGTGCCGA +
Preference number: 4 (lower is better)
Translates to: PGTPEHPLKHEKLQSALLRVTAE*GRGLCR
Trigger: TCGGCACAGACCCCTGCCTCATTCAGCTGTGACTCT...GAGCAAGGCTGATTGGAGCTTCTCATGCTTCAGGGGATGTTCTGGTGTTCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414073.6
ENST00000416269.6
ENST00000426341.6
CDS-3UTR CCA 90 bp GCAAATGACAATGCTGGCAGTCGGGAGGCGGGCTGGGTAATGTTTTTGAAGACATGGGGTCCTTGGCAATaGCATGCAGCAGGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: ANDNAGSREAGWVMFLKTWGPWQ*HAAGAP
Trigger: TGGAGCCCCTGCTGCATGCCATTGCCAAGGACCCCA...TGTCTTCAAAAACATTACCCAGCCCGCCTCCCGACTGCCAGCATTGTCATTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000414073.6
ENST00000416269.6
ENST00000426341.6
CDS-3UTR CCA 90 bp TGGGACGCCATGAGCCAGGCCTTAACTGCAGTTGGTCTGATTCCGCTTCTTTCAGATACCTGGTTGTGCTaGGTTGCGGGGCCACACAGT +
Preference number: 4 (lower is better)
Translates to: WDAMSQALTAVGLIPLLSDTWLC*VAGPHS
Trigger: ACTGTGTGGCCCCGCAACCCAGCACAACCAGGTATC...TGAAAGAAGCGGAATCAGACCAACTGCAGTTAAGGCCTGGCTCATGGCGTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416269.6
CDS-3UTR TCA 90 bp GGAACACCAGAACATCCCCTGAAGCATGAGAAGCTCCAATCAGCCTTGCTCGAAAAGCAGAGTCACAGCTaGATGAGGCAGGGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: GTPEHPLKHEKLQSALLEKQSHS*MRQGSV
Trigger: CACAGACCCCTGCCTCATTCAGCTGTGACTCTGCTT...TTCGAGCAAGGCTGATTGGAGCTTCTCATGCTTCAGGGGATGTTCTGGTGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000414073.6
ENST00000416269.6
ENST00000426341.6
CDS-3UTR GCA 90 bp TCCAGAGTTCTATCATCAATGACATCTATCAGGGGGCACACCACCATTTTGGGGGCAGATACCTGGTTGTaGTGGGTTGCGGGGCCACAC +
Preference number: 4 (lower is better)
Translates to: SRVLSSMTSIRGHTTILGADTWL*WVAGPH
Trigger: GTGTGGCCCCGCAACCCAGCACAACCAGGTATCTGC...CCCCAAAATGGTGGTGTGCCCCCTGATAGATGTCATTGATGATAGAACTCTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR GCA 90 bp GGGCTTATACTCCAGAGTTCTATCATCAATGACATCTATCAGGGGGCACACCACGCAGATACCTGGTTGTaGTGGGTTGCGGGGCCACAC +
Preference number: 4 (lower is better)
Translates to: GLILQSSIINDIYQGAHHADTWL*WVAGPH
Trigger: GTGTGGCCCCGCAACCCAGCACAACCAGGTATCTGC...GTGGTGTGCCCCCTGATAGATGTCATTGATGATAGAACTCTGGAGTATAAGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR TCA 90 bp GGGCTTATACTCCAGAGTTCTATCATCAATGACATCTATCAGGGGGCACACCACAGAGTCACAGCTGAATaGGGCAGGGGTCTGTGCCGA +
Preference number: 4 (lower is better)
Translates to: GLILQSSIINDIYQGAHHRVTAE*GRGLCR
Trigger: TCGGCACAGACCCCTGCCTCATTCAGCTGTGACTCT...GTGGTGTGCCCCCTGATAGATGTCATTGATGATAGAACTCTGGAGTATAAGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR TCA 90 bp TGGGACGCCATGAGCCAGGCCTTAACTGCAGTTGGTCTGATTCCGCTTCTTTCAACATCCCCTGAAGCATaGGAAGCTCCAATCAGCCTT +
Preference number: 4 (lower is better)
Translates to: WDAMSQALTAVGLIPLLSTSPEA*EAPISL
Trigger: AAGGCTGATTGGAGCTTCTCATGCTTCAGGGGATGT...TGAAAGAAGCGGAATCAGACCAACTGCAGTTAAGGCCTGGCTCATGGCGTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416269.6
CDS-3UTR TCA 90 bp TTTGGGGTCCTTGGCAATGGCATGCAGCAGGGGCTCCAGCCATACTCTGTTCACGAGTTCTATCATCAATaGCATCTATCAGGGGGCACA +
Preference number: 4 (lower is better)
Translates to: FGVLGNGMQQGLQPYSVHEFYHQ*HLSGGT
Trigger: TGTGCCCCCTGATAGATGTCATTGATGATAGAACTC...GTGAACAGAGTATGGCTGGAGCCCCTGCTGCATGCCATTGCCAAGGACCCCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR TCA 90 bp GATCTCCAGACACCTCACTCACATCCAGGATGTAGGAGGCAGCAAGAGGAGGGAGAGTTCTATCATCAATaGCATCTATCAGGGGGCACA +
Preference number: 4 (lower is better)
Translates to: DLQTPHSHPGCRRQQEEGEFYHQ*HLSGGT
Trigger: TGTGCCCCCTGATAGATGTCATTGATGATAGAACTC...TCCCTCCTCTTGCTGCCTCCTACATCCTGGATGTGAGTGAGGTGTCTGGAGATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416269.6
CDS-3UTR TCA 90 bp TTTGGGGTCCTTGGCAATGGCATGCAGCAGGGGCTCCAGCCATACTCTGTTCACGAATATTTCCGTAGGTaGCATATTTCAGACCAGGCT +
Preference number: 4 (lower is better)
Translates to: FGVLGNGMQQGLQPYSVHEYFRR*HISDQA
Trigger: AGCCTGGTCTGAAATATGTCACCTACGGAAATATTC...GTGAACAGAGTATGGCTGGAGCCCCTGCTGCATGCCATTGCCAAGGACCCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR GCA 90 bp AAGAGGAGAGGGCTTATACTCCAGAGTTCTATCATCAATGACATCTATCAGGGGGCAGATACCTGGTTGTaGTGGGTTGCGGGGCCACAC +
Preference number: 4 (lower is better)
Translates to: KRRGLILQSSIINDIYQGADTWL*WVAGPH
Trigger: GTGTGGCCCCGCAACCCAGCACAACCAGGTATCTGC...CCCCTGATAGATGTCATTGATGATAGAACTCTGGAGTATAAGCCCTCTCCTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR CCA 90 bp TTTGGGGTCCTTGGCAATGGCATGCAGCAGGGGCTCCAGCCATACTCTGTTCACTTCAAGAAAATAGTGTaGCGTGAGGTTCGTGACACT +
Preference number: 4 (lower is better)
Translates to: FGVLGNGMQQGLQPYSVHFKKIV*REVRDT
Trigger: AGTGTCACGAACCTCACGCCACACTATTTTCTTGAA...GTGAACAGAGTATGGCTGGAGCCCCTGCTGCATGCCATTGCCAAGGACCCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000414073.6
ENST00000416269.6
ENST00000426341.6
CDS-3UTR CCA 90 bp AAGAGGAGAGGGCTTATACTCCAGAGTTCTATCATCAATGACATCTATCAGGGGTGGGGTCCTTGGCAATaGCATGCAGCAGGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: KRRGLILQSSIINDIYQGWGPWQ*HAAGAP
Trigger: TGGAGCCCCTGCTGCATGCCATTGCCAAGGACCCCA...CCCCTGATAGATGTCATTGATGATAGAACTCTGGAGTATAAGCCCTCTCCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR CCA 90 bp AGTTGGCCTCCACACATCCAGATCCTTAGTGAAAGTTCCAAATTTTCTCTTCCCTGGGGTCCTTGGCAATaGCATGCAGCAGGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: SWPPHIQILSESSKFSLPWGPWQ*HAAGAP
Trigger: TGGAGCCCCTGCTGCATGCCATTGCCAAGGACCCCA...GGGAAGAGAAAATTTGGAACTTTCACTAAGGATCTGGATGTGTGGAGGCCAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR CCA 90 bp CTGATATGTCCTACTCGAGAGCAGGGGATTATAAAGAGTTGGCCTCCACACATCCCATTTTGGGGTCCTTaGCAATGGCATGCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: LICPTREQGIIKSWPPHIPFWGP*QWHAAG
Trigger: CCCTGCTGCATGCCATTGCCAAGGACCCCAAAATGG...GATGTGTGGAGGCCAACTCTTTATAATCCCCTGCTCTCGAGTAGGACATATCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR CCA 90 bp AGAGGAGAGGGCTTATACTCCAGAGTTCTATCATCAATGACATCTATCAGGGGGGATACCTGGTTGTGCTaGGTTGCGGGGCCACACAGT +
Preference number: 4 (lower is better)
Translates to: RGEGLYSRVLSSMTSIRGDTWLC*VAGPHS
Trigger: ACTGTGTGGCCCCGCAACCCAGCACAACCAGGTATC...CCCCCTGATAGATGTCATTGATGATAGAACTCTGGAGTATAAGCCCTCTCCTCT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR CCA 90 bp GGGCTTATACTCCAGAGTTCTATCATCAATGACATCTATCAGGGGGCACACCACTTCCAAGCAGATACCTaGTTGTGCTGGGTTGCGGGG +
Preference number: 4 (lower is better)
Translates to: GLILQSSIINDIYQGAHHFQADT*LCWVAG
Trigger: CCCCGCAACCCAGCACAACCAGGTATCTGCTTGGAA...GTGGTGTGCCCCCTGATAGATGTCATTGATGATAGAACTCTGGAGTATAAGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR TCA 90 bp TTCTTACTGATATGTCCTACTCGAGAGCAGGGGATTATAAAGAGTTGGCCTCCAAGAGTCACAGCTGAATaGGGCAGGGGTCTGTGCCGA +
Preference number: 4 (lower is better)
Translates to: FLLICPTREQGIIKSWPPRVTAE*GRGLCR
Trigger: TCGGCACAGACCCCTGCCTCATTCAGCTGTGACTCT...TGGAGGCCAACTCTTTATAATCCCCTGCTCTCGAGTAGGACATATCAGTAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR TCA 90 bp AGAGGAGAGGGCTTATACTCCAGAGTTCTATCATCAATGACATCTATCAGGGGGAAGCAGAGTCACAGCTaGATGAGGCAGGGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: RGEGLYSRVLSSMTSIRGKQSHS*MRQGSV
Trigger: CACAGACCCCTGCCTCATTCAGCTGTGACTCTGCTT...CCCCCTGATAGATGTCATTGATGATAGAACTCTGGAGTATAAGCCCTCTCCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR TCA 90 bp TTCTTACTGATATGTCCTACTCGAGAGCAGGGGATTATAAAGAGTTGGCCTCCATCCAGGGGACCAAGCTaGCAGAGGCTCCTGGCTTTT +
Preference number: 4 (lower is better)
Translates to: FLLICPTREQGIIKSWPPSRGPS*QRLLAF
Trigger: AAAAGCCAGGAGCCTCTGTCAGCTTGGTCCCCTGGA...TGGAGGCCAACTCTTTATAATCCCCTGCTCTCGAGTAGGACATATCAGTAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR TCA 90 bp TCCCCTTACAAGAGGAGAGGGCTTATACTCCAGAGTTCTATCATCAATGACATCTCCAGGGGACCAAGCTaGCAGAGGCTCCTGGCTTTT +
Preference number: 4 (lower is better)
Translates to: SPYKRRGLILQSSIINDISRGPS*QRLLAF
Trigger: AAAAGCCAGGAGCCTCTGTCAGCTTGGTCCCCTGGA...GATGTCATTGATGATAGAACTCTGGAGTATAAGCCCTCTCCTCTTGTAAGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR TCA 90 bp AGTTGGCCTCCACACATCCAGATCCTTAGTGAAAGTTCCAAATTTTCTCTTCCCTCCAGGGGACCAAGCTaGCAGAGGCTCCTGGCTTTT +
Preference number: 4 (lower is better)
Translates to: SWPPHIQILSESSKFSLPSRGPS*QRLLAF
Trigger: AAAAGCCAGGAGCCTCTGTCAGCTTGGTCCCCTGGA...GGGAAGAGAAAATTTGGAACTTTCACTAAGGATCTGGATGTGTGGAGGCCAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR TCA 90 bp TTCTTACTGATATGTCCTACTCGAGAGCAGGGGATTATAAAGAGTTGGCCTCCAGGGTCAGGGGCAGGTTaGACAGGAACAGGTTCATGG +
Preference number: 4 (lower is better)
Translates to: FLLICPTREQGIIKSWPPGSGAG*TGTGSW
Trigger: CCATGAACCTGTTCCTGTTCAACCTGCCCCTGACCC...TGGAGGCCAACTCTTTATAATCCCCTGCTCTCGAGTAGGACATATCAGTAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414073.6
ENST00000416269.6
CDS-3UTR GCA 90 bp CTGATATGTCCTACTCGAGAGCAGGGGATTATAAAGAGTTGGCCTCCACACATCCAGGCTGTTCACAGATaGCTCCAACTCTGGGAAGAC +
Preference number: 4 (lower is better)
Translates to: LICPTREQGIIKSWPPHIQAVHR*LQLWED
Trigger: GTCTTCCCAGAGTTGGAGGCATCTGTGAACAGCCTG...GATGTGTGGAGGCCAACTCTTTATAATCCCCTGCTCTCGAGTAGGACATATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR GCA 90 bp ATACTCCAGAGTTCTATCATCAATGACATCTATCAGGGGGCACACCACCATTTTGCAGATACCTGGTTGTaGTGGGTTGCGGGGCCACAC +
Preference number: 4 (lower is better)
Translates to: ILQSSIINDIYQGAHHHFADTWL*WVAGPH
Trigger: GTGTGGCCCCGCAACCCAGCACAACCAGGTATCTGC...AAAATGGTGGTGTGCCCCCTGATAGATGTCATTGATGATAGAACTCTGGAGTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR CCA 90 bp TGGGACGCCATGAGCCAGGCCTTAACTGCAGTTGGTCTGATTCCGCTTCTTTCATTTACTCCTGGTATCTaGCACTTCTCTTTCGATGCC +
Preference number: 4 (lower is better)
Translates to: WDAMSQALTAVGLIPLLSFTPGI*HFSFDA
Trigger: GGCATCGAAAGAGAAGTGCCAGATACCAGGAGTAAA...TGAAAGAAGCGGAATCAGACCAACTGCAGTTAAGGCCTGGCTCATGGCGTCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416269.6
CDS-3UTR CCA 90 bp CTGATATGTCCTACTCGAGAGCAGGGGATTATAAAGAGTTGGCCTCCACACATCGGCACACCACCATTTTaGGGTCCTTGGCAATGGCAT +
Preference number: 4 (lower is better)
Translates to: LICPTREQGIIKSWPPHIGTPPF*GPWQWH
Trigger: ATGCCATTGCCAAGGACCCCAAAATGGTGGTGTGCC...GATGTGTGGAGGCCAACTCTTTATAATCCCCTGCTCTCGAGTAGGACATATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR CCA 90 bp CGACGTATAGCAAAAATTCCTCCAGACATTGCAGGTGACCGGATTGGTTTAGTAGATACCTGGTTGTGCTaGGTTGCGGGGCCACACAGT +
Preference number: 4 (lower is better)
Translates to: RRIAKIPPDIAGDRIGLVDTWLC*VAGPHS
Trigger: ACTGTGTGGCCCCGCAACCCAGCACAACCAGGTATC...TACTAAACCAATCCGGTCACCTGCAATGTCTGGAGGAATTTTTGCTATACGTCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
3UTR CAA 72 bp AATGCTGGCAGTCGGGAGGCGGGCTGGGTAATGTTTTaGAAGACACCTGCAGGCAGAAGCAATATGAAGAAA +
Preference number: 4 (lower is better)
Translates to: NAGSREAGWVMF*KTPAGRSNMKK
Trigger: TTTCTTCATATTGCTTCTGCCTGCAGGTGTCTTCAAAAACATTACCCAGCCCGCCTCCCGACTGCCAGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414073.6
ENST00000416269.6
ENST00000426341.6
CDS-3UTR TCA 90 bp TCCCCTTACAAGAGGAGAGGGCTTATACTCCAGAGTTCTATCATCAATGACATCAAGCAGAGTCACAGCTaGATGAGGCAGGGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: SPYKRRGLILQSSIINDIKQSHS*MRQGSV
Trigger: CACAGACCCCTGCCTCATTCAGCTGTGACTCTGCTT...GATGTCATTGATGATAGAACTCTGGAGTATAAGCCCTCTCCTCTTGTAAGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR TCA 90 bp CTTATACTCCAGAGTTCTATCATCAATGACATCTATCAGGGGGCACACCACCATAAGCAGAGTCACAGCTaGATGAGGCAGGGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: LILQSSIINDIYQGAHHHKQSHS*MRQGSV
Trigger: CACAGACCCCTGCCTCATTCAGCTGTGACTCTGCTT...ATGGTGGTGTGCCCCCTGATAGATGTCATTGATGATAGAACTCTGGAGTATAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR TCA 90 bp ATACTCCAGAGTTCTATCATCAATGACATCTATCAGGGGGCACACCACCATTTTTCCAGGGGACCAAGCTaGCAGAGGCTCCTGGCTTTT +
Preference number: 4 (lower is better)
Translates to: ILQSSIINDIYQGAHHHFSRGPS*QRLLAF
Trigger: AAAAGCCAGGAGCCTCTGTCAGCTTGGTCCCCTGGA...AAAATGGTGGTGTGCCCCCTGATAGATGTCATTGATGATAGAACTCTGGAGTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR TCA 90 bp CCAGGAACACCAGAACATCCCCTGAAGCATGAGAAGCTCCAATCAGCCTTGCTCCAGTTTGTTTCTTACTaGTATGTCCTACTCGAGAGC +
Preference number: 4 (lower is better)
Translates to: PGTPEHPLKHEKLQSALLQFVSY*YVLLES
Trigger: GCTCTCGAGTAGGACATATCAGTAAGAAACAAACTG...GAGCAAGGCTGATTGGAGCTTCTCATGCTTCAGGGGATGTTCTGGTGTTCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414073.6
ENST00000416269.6
ENST00000426341.6
CDS-3UTR TCA 90 bp CCAGGAACACCAGAACATCCCCTGAAGCATGAGAAGCTCCAATCAGCCTTGCTCCAAATACCACTGAAATaGCTTGCAACCCAGTCGTTT +
Preference number: 4 (lower is better)
Translates to: PGTPEHPLKHEKLQSALLQIPLK*LATQSF
Trigger: AAACGACTGGGTTGCAAGTCATTTCAGTGGTATTTG...GAGCAAGGCTGATTGGAGCTTCTCATGCTTCAGGGGATGTTCTGGTGTTCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414073.6
ENST00000416269.6
ENST00000426341.6
CDS-3UTR TCA 90 bp AGAAAGAGGCAGGGATACAGGCTGCATAGCTGCACTTGCAGGCCTGGGCAGCATCTTGTGACACTATGTTaGATGACTAGGAGACTTTTA +
Preference number: 4 (lower is better)
Translates to: RKRQGYRLHSCTCRPGQHLVTLC*MTRRLL
Trigger: TAAAAGTCTCCTAGTCATTCAACATAGTGTCACAAG...ATGCTGCCCAGGCCTGCAAGTGCAGCTATGCAGCCTGTATCCCTGCCTCTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416269.6
CDS-3UTR TCA 90 bp ACCATCCATCTAAATGCCTTGGATGTTGTGTCATCTCGTTCAAACACTTCTCCTGGGTCAGGGGCAGGTTaGACAGGAACAGGTTCATGG +
Preference number: 4 (lower is better)
Translates to: TIHLNALDVVSSRSNTSPGSGAG*TGTGSW
Trigger: CCATGAACCTGTTCCTGTTCAACCTGCCCCTGACCC...AGGAGAAGTGTTTGAACGAGATGACACAACATCCAAGGCATTTAGATGGATGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414073.6
ENST00000416269.6
CDS-3UTR GCA 90 bp TTATACTCCAGAGTTCTATCATCAATGACATCTATCAGGGGGCACACCACCATTCTGCATAGCTGCACTTaGAGGCCTGGGCAGCATCTC +
Preference number: 4 (lower is better)
Translates to: LYSRVLSSMTSIRGHTTILHSCT*RPGQHL
Trigger: GAGATGCTGCCCAGGCCTGCAAGTGCAGCTATGCAG...AATGGTGGTGTGCCCCCTGATAGATGTCATTGATGATAGAACTCTGGAGTATAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416269.6
CDS-3UTR CCA 90 bp TTCTTACTGATATGTCCTACTCGAGAGCAGGGGATTATAAAGAGTTGGCCTCCAGCTGACAGAGGCTCCTaGCTTTTCTTCTGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: FLLICPTREQGIIKSWPPADRGS*LFFCQL
Trigger: CAGCTGGCAGAAGAAAAGCCAGGAGCCTCTGTCAGC...TGGAGGCCAACTCTTTATAATCCCCTGCTCTCGAGTAGGACATATCAGTAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR CCA 90 bp AATTTCTTCAAGAAAATAGTGTGGCGTGAGGTTCGTGACACTGGACATGGTCTGGCTGACAGAGGCTCCTaGCTTTTCTTCTGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: NFFKKIVWREVRDTGHGLADRGS*LFFCQL
Trigger: CAGCTGGCAGAAGAAAAGCCAGGAGCCTCTGTCAGC...CAGACCATGTCCAGTGTCACGAACCTCACGCCACACTATTTTCTTGAAGAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414073.6
ENST00000416269.6
ENST00000426341.6
CDS-3UTR CCA 90 bp AAGAGGAGAGGGCTTATACTCCAGAGTTCTATCATCAATGACATCTATCAGGGGGCTGACAGAGGCTCCTaGCTTTTCTTCTGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: KRRGLILQSSIINDIYQGADRGS*LFFCQL
Trigger: CAGCTGGCAGAAGAAAAGCCAGGAGCCTCTGTCAGC...CCCCTGATAGATGTCATTGATGATAGAACTCTGGAGTATAAGCCCTCTCCTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR CCA 90 bp CGACGTATAGCAAAAATTCCTCCAGACATTGCAGGTGACCGGATTGGTTTAGTACCATTTTGGGGTCCTTaGCAATGGCATGCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: RRIAKIPPDIAGDRIGLVPFWGP*QWHAAG
Trigger: CCCTGCTGCATGCCATTGCCAAGGACCCCAAAATGG...TACTAAACCAATCCGGTCACCTGCAATGTCTGGAGGAATTTTTGCTATACGTCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR CCA 90 bp CCAGGAACACCAGAACATCCCCTGAAGCATGAGAAGCTCCAATCAGCCTTGCTCCTTCTTAACTGCAGTTaGTCTGATTCCGCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: PGTPEHPLKHEKLQSALLLLNCS*SDSASF
Trigger: GAAAGAAGCGGAATCAGACCAACTGCAGTTAAGAAG...GAGCAAGGCTGATTGGAGCTTCTCATGCTTCAGGGGATGTTCTGGTGTTCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414073.6
CDS-3UTR CCA 90 bp TTCTTACTGATATGTCCTACTCGAGAGCAGGGGATTATAAAGAGTTGGCCTCCATTCCAAGCAGATACCTaGTTGTGCTGGGTTGCGGGG +
Preference number: 4 (lower is better)
Translates to: FLLICPTREQGIIKSWPPFQADT*LCWVAG
Trigger: CCCCGCAACCCAGCACAACCAGGTATCTGCTTGGAA...TGGAGGCCAACTCTTTATAATCCCCTGCTCTCGAGTAGGACATATCAGTAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR TCA 90 bp TACAAGAGGAGAGGGCTTATACTCCAGAGTTCTATCATCAATGACATCTATCAGAGAGTCACAGCTGAATaGGGCAGGGGTCTGTGCCGA +
Preference number: 4 (lower is better)
Translates to: YKRRGLILQSSIINDIYQRVTAE*GRGLCR
Trigger: TCGGCACAGACCCCTGCCTCATTCAGCTGTGACTCT...CTGATAGATGTCATTGATGATAGAACTCTGGAGTATAAGCCCTCTCCTCTTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR TCA 90 bp TACAAGAGGAGAGGGCTTATACTCCAGAGTTCTATCATCAATGACATCTATCAGTCCAGGGGACCAAGCTaGCAGAGGCTCCTGGCTTTT +
Preference number: 4 (lower is better)
Translates to: YKRRGLILQSSIINDIYQSRGPS*QRLLAF
Trigger: AAAAGCCAGGAGCCTCTGTCAGCTTGGTCCCCTGGA...CTGATAGATGTCATTGATGATAGAACTCTGGAGTATAAGCCCTCTCCTCTTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR TCA 90 bp GATCTCCAGACACCTCACTCACATCCAGGATGTAGGAGGCAGCAAGAGGAGGGATTTTGGTATTTGCTCTaGGCCATAGATAATTTGCTG +
Preference number: 4 (lower is better)
Translates to: DLQTPHSHPGCRRQQEEGFWYLL*AIDNLL
Trigger: CAGCAAATTATCTATGGCTCAGAGCAAATACCAAAA...TCCCTCCTCTTGCTGCCTCCTACATCCTGGATGTGAGTGAGGTGTCTGGAGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416269.6
CDS-3UTR TCA 90 bp AGAGGAGAGGGCTTATACTCCAGAGTTCTATCATCAATGACATCTATCAGGGGGACATCCCCTGAAGCATaGGAAGCTCCAATCAGCCTT +
Preference number: 4 (lower is better)
Translates to: RGEGLYSRVLSSMTSIRGTSPEA*EAPISL
Trigger: AAGGCTGATTGGAGCTTCTCATGCTTCAGGGGATGT...CCCCCTGATAGATGTCATTGATGATAGAACTCTGGAGTATAAGCCCTCTCCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414073.6
ENST00000416269.6
ENST00000426341.6
CDS-3UTR TCA 90 bp GCAAATGACAATGCTGGCAGTCGGGAGGCGGGCTGGGTAATGTTTTTGAAGACACAGTTTGTTTCTTACTaGTATGTCCTACTCGAGAGC +
Preference number: 4 (lower is better)
Translates to: ANDNAGSREAGWVMFLKTQFVSY*YVLLES
Trigger: GCTCTCGAGTAGGACATATCAGTAAGAAACAAACTG...TGTCTTCAAAAACATTACCCAGCCCGCCTCCCGACTGCCAGCATTGTCATTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414073.6
ENST00000416269.6
ENST00000426341.6
CDS-3UTR GCA 90 bp AAGAGGAGAGGGCTTATACTCCAGAGTTCTATCATCAATGACATCTATCAGGGGAGCTCCAATCAGCCTTaGTCGAATCAGCCCCTCTCT +
Preference number: 4 (lower is better)
Translates to: KRRGLILQSSIINDIYQGSSNQP*SNQPLS
Trigger: AGAGAGGGGCTGATTCGAGCAAGGCTGATTGGAGCT...CCCCTGATAGATGTCATTGATGATAGAACTCTGGAGTATAAGCCCTCTCCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414073.6
ENST00000416269.6
ENST00000426341.6
CDS-3UTR GCA 90 bp AATTTCTTCAAGAAAATAGTGTGGCGTGAGGTTCGTGACACTGGACATGGTCTGAGCTCCAATCAGCCTTaGTCGAATCAGCCCCTCTCT +
Preference number: 4 (lower is better)
Translates to: NFFKKIVWREVRDTGHGLSSNQP*SNQPLS
Trigger: AGAGAGGGGCTGATTCGAGCAAGGCTGATTGGAGCT...CAGACCATGTCCAGTGTCACGAACCTCACGCCACACTATTTTCTTGAAGAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414073.6
ENST00000416269.6
ENST00000426341.6
CDS-3UTR GCA 90 bp AGTTGGCCTCCACACATCCAGATCCTTAGTGAAAGTTCCAAATTTTCTCTTCCCCAGGCTGTTCACAGATaGCTCCAACTCTGGGAAGAC +
Preference number: 4 (lower is better)
Translates to: SWPPHIQILSESSKFSLPQAVHR*LQLWED
Trigger: GTCTTCCCAGAGTTGGAGGCATCTGTGAACAGCCTG...GGGAAGAGAAAATTTGGAACTTTCACTAAGGATCTGGATGTGTGGAGGCCAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR GCA 90 bp AAGAGGAGAGGGCTTATACTCCAGAGTTCTATCATCAATGACATCTATCAGGGGCAGGCTGTTCACAGATaGCTCCAACTCTGGGAAGAC +
Preference number: 4 (lower is better)
Translates to: KRRGLILQSSIINDIYQGQAVHR*LQLWED
Trigger: GTCTTCCCAGAGTTGGAGGCATCTGTGAACAGCCTG...CCCCTGATAGATGTCATTGATGATAGAACTCTGGAGTATAAGCCCTCTCCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR GCA 90 bp GGAACACCAGAACATCCCCTGAAGCATGAGAAGCTCCAATCAGCCTTGCTCGAAGATCTTCTTCTTAACTaGAGTTGGTCTGATTCCGCT +
Preference number: 4 (lower is better)
Translates to: GTPEHPLKHEKLQSALLEDLLLN*SWSDSA
Trigger: AGCGGAATCAGACCAACTGCAGTTAAGAAGAAGATC...TTCGAGCAAGGCTGATTGGAGCTTCTCATGCTTCAGGGGATGTTCTGGTGTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414073.6
CDS-3UTR CCA 90 bp AGGAGAGGGCTTATACTCCAGAGTTCTATCATCAATGACATCTATCAGGGGGCAAGGCTTTATGGTGGCTaGGTTCCAAGCAGATACCTG +
Preference number: 4 (lower is better)
Translates to: RRGLILQSSIINDIYQGARLYGG*VPSRYL
Trigger: CAGGTATCTGCTTGGAACCCAGCCACCATAAAGCCT...TGCCCCCTGATAGATGTCATTGATGATAGAACTCTGGAGTATAAGCCCTCTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR CCA 90 bp CAATCAAAAGTTCCCCTTACAAGAGGAGAGGGCTTATACTCCAGAGTTCTATCAGCTGACAGAGGCTCCTaGCTTTTCTTCTGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: QSKVPLTRGEGLYSRVLSADRGS*LFFCQL
Trigger: CAGCTGGCAGAAGAAAAGCCAGGAGCCTCTGTCAGC...TGATAGAACTCTGGAGTATAAGCCCTCTCCTCTTGTAAGGGGAACTTTTGATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR CCA 90 bp TTATACTCCAGAGTTCTATCATCAATGACATCTATCAGGGGGCACACCACCATTGCTGACAGAGGCTCCTaGCTTTTCTTCTGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: LYSRVLSSMTSIRGHTTIADRGS*LFFCQL
Trigger: CAGCTGGCAGAAGAAAAGCCAGGAGCCTCTGTCAGC...AATGGTGGTGTGCCCCCTGATAGATGTCATTGATGATAGAACTCTGGAGTATAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR CCA 90 bp AGGAGAGGGCTTATACTCCAGAGTTCTATCATCAATGACATCTATCAGGGGGCAAGTCGGGAGGCGGGCTaGGTAATGTTTTTGAAGACA +
Preference number: 4 (lower is better)
Translates to: RRGLILQSSIINDIYQGASREAG*VMFLKT
Trigger: TGTCTTCAAAAACATTACCCAGCCCGCCTCCCGACT...TGCCCCCTGATAGATGTCATTGATGATAGAACTCTGGAGTATAAGCCCTCTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000414073.6
ENST00000416269.6
ENST00000426341.6
CDS-3UTR CCA 90 bp TGCATTTCACGTAATTCCACGATGTTCCAAACTTACACTCTTGTGACACTATGTTGGGGTCCTTGGCAATaGCATGCAGCAGGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: CISRNSTMFQTYTLVTLCWGPWQ*HAAGAP
Trigger: TGGAGCCCCTGCTGCATGCCATTGCCAAGGACCCCA...ACATAGTGTCACAAGAGTGTAAGTTTGGAACATCGTGGAATTACGTGAAATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000392800.7
ENST00000414073.6
ENST00000416269.6
ENST00000431418.6
ENST00000616416.4
CDS-3UTR CCA 90 bp ATACTCCAGAGTTCTATCATCAATGACATCTATCAGGGGGCACACCACCATTTTCCATTTTGGGGTCCTTaGCAATGGCATGCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: ILQSSIINDIYQGAHHHFPFWGP*QWHAAG
Trigger: CCCTGCTGCATGCCATTGCCAAGGACCCCAAAATGG...AAAATGGTGGTGTGCCCCCTGATAGATGTCATTGATGATAGAACTCTGGAGTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR CCA 90 bp TCCCCTTACAAGAGGAGAGGGCTTATACTCCAGAGTTCTATCATCAATGACATCGGCACACCACCATTTTaGGGTCCTTGGCAATGGCAT +
Preference number: 4 (lower is better)
Translates to: SPYKRRGLILQSSIINDIGTPPF*GPWQWH
Trigger: ATGCCATTGCCAAGGACCCCAAAATGGTGGTGTGCC...GATGTCATTGATGATAGAACTCTGGAGTATAAGCCCTCTCCTCTTGTAAGGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR CCA 90 bp CGACGTATAGCAAAAATTCCTCCAGACATTGCAGGTGACCGGATTGGTTTAGTAGGCACACCACCATTTTaGGGTCCTTGGCAATGGCAT +
Preference number: 4 (lower is better)
Translates to: RRIAKIPPDIAGDRIGLVGTPPF*GPWQWH
Trigger: ATGCCATTGCCAAGGACCCCAAAATGGTGGTGTGCC...TACTAAACCAATCCGGTCACCTGCAATGTCTGGAGGAATTTTTGCTATACGTCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR CCA 90 bp GGTTTTCCAGTTTGTTTCTTACTGATATGTCCTACTCGAGAGCAGGGGATTATAGATACCTGGTTGTGCTaGGTTGCGGGGCCACACAGT +
Preference number: 4 (lower is better)
Translates to: GFPVCFLLICPTREQGIIDTWLC*VAGPHS
Trigger: ACTGTGTGGCCCCGCAACCCAGCACAACCAGGTATC...TATAATCCCCTGCTCTCGAGTAGGACATATCAGTAAGAAACAAACTGGAAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR CCA 90 bp TTATACTCCAGAGTTCTATCATCAATGACATCTATCAGGGGGCACACCACCATTTTCCAAGCAGATACCTaGTTGTGCTGGGTTGCGGGG +
Preference number: 4 (lower is better)
Translates to: LYSRVLSSMTSIRGHTTIFQADT*LCWVAG
Trigger: CCCCGCAACCCAGCACAACCAGGTATCTGCTTGGAA...AATGGTGGTGTGCCCCCTGATAGATGTCATTGATGATAGAACTCTGGAGTATAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR TCA 90 bp GGGCTTATACTCCAGAGTTCTATCATCAATGACATCTATCAGGGGGCACACCACGGGGTCTGTGCCGAATaGACTGAGAGATGTAAAATT +
Preference number: 4 (lower is better)
Translates to: GLILQSSIINDIYQGAHHGVCAE*TERCKI
Trigger: AATTTTACATCTCTCAGTTCATTCGGCACAGACCCC...GTGGTGTGCCCCCTGATAGATGTCATTGATGATAGAACTCTGGAGTATAAGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR TCA 90 bp TGCATTTCACGTAATTCCACGATGTTCCAAACTTACACTCTTGTGACACTATGTAGAGTCACAGCTGAATaGGGCAGGGGTCTGTGCCGA +
Preference number: 4 (lower is better)
Translates to: CISRNSTMFQTYTLVTLCRVTAE*GRGLCR
Trigger: TCGGCACAGACCCCTGCCTCATTCAGCTGTGACTCT...ACATAGTGTCACAAGAGTGTAAGTTTGGAACATCGTGGAATTACGTGAAATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392800.7
ENST00000414073.6
ENST00000416269.6
ENST00000616416.4
CDS-3UTR TCA 90 bp GGTTTTCCAGTTTGTTTCTTACTGATATGTCCTACTCGAGAGCAGGGGATTATAAAGCAGAGTCACAGCTaGATGAGGCAGGGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: GFPVCFLLICPTREQGIIKQSHS*MRQGSV
Trigger: CACAGACCCCTGCCTCATTCAGCTGTGACTCTGCTT...TATAATCCCCTGCTCTCGAGTAGGACATATCAGTAAGAAACAAACTGGAAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR TCA 90 bp TGCATTTCACGTAATTCCACGATGTTCCAAACTTACACTCTTGTGACACTATGTTCCAGGGGACCAAGCTaGCAGAGGCTCCTGGCTTTT +
Preference number: 4 (lower is better)
Translates to: CISRNSTMFQTYTLVTLCSRGPS*QRLLAF
Trigger: AAAAGCCAGGAGCCTCTGTCAGCTTGGTCCCCTGGA...ACATAGTGTCACAAGAGTGTAAGTTTGGAACATCGTGGAATTACGTGAAATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392800.7
ENST00000414073.6
ENST00000416269.6
ENST00000431418.6
ENST00000616416.4
CDS-3UTR TCA 90 bp TCCCCTTACAAGAGGAGAGGGCTTATACTCCAGAGTTCTATCATCAATGACATCACATCCCCTGAAGCATaGGAAGCTCCAATCAGCCTT +
Preference number: 4 (lower is better)
Translates to: SPYKRRGLILQSSIINDITSPEA*EAPISL
Trigger: AAGGCTGATTGGAGCTTCTCATGCTTCAGGGGATGT...GATGTCATTGATGATAGAACTCTGGAGTATAAGCCCTCTCCTCTTGTAAGGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414073.6
ENST00000416269.6
ENST00000426341.6
CDS-3UTR TCA 90 bp GTGTGGCGTGAGGTTCGTGACACTGGACATGGTCTGAAACAAGGCATTACATTCCAAATACCACTGAAATaGCTTGCAACCCAGTCGTTT +
Preference number: 4 (lower is better)
Translates to: VWREVRDTGHGLKQGITFQIPLK*LATQSF
Trigger: AAACGACTGGGTTGCAAGTCATTTCAGTGGTATTTG...GAATGTAATGCCTTGTTTCAGACCATGTCCAGTGTCACGAACCTCACGCCACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414073.6
ENST00000416269.6
ENST00000426341.6
CDS-3UTR GCA 90 bp GGAGGCGGGCTGGGTAATGTTTTTGAAGACACCTGCAGGCAGAAGCAATATGAATTTTCTTCTGCCAGCTaGTCACATGATTATGGTGCA +
Preference number: 4 (lower is better)
Translates to: GGGLGNVFEDTCRQKQYEFSSAS*SHDYGA
Trigger: TGCACCATAATCATGTGAGCAGCTGGCAGAAGAAAA...TTCATATTGCTTCTGCCTGCAGGTGTCTTCAAAAACATTACCCAGCCCGCCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414073.6
ENST00000416269.6
ENST00000426341.6
CDS-3UTR GCA 90 bp CAATCAAAAGTTCCCCTTACAAGAGGAGAGGGCTTATACTCCAGAGTTCTATCAAGCTCCAATCAGCCTTaGTCGAATCAGCCCCTCTCT +
Preference number: 4 (lower is better)
Translates to: QSKVPLTRGEGLYSRVLSSSNQP*SNQPLS
Trigger: AGAGAGGGGCTGATTCGAGCAAGGCTGATTGGAGCT...TGATAGAACTCTGGAGTATAAGCCCTCTCCTCTTGTAAGGGGAACTTTTGATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000414073.6
ENST00000416269.6
ENST00000426341.6
CDS-3UTR GCA 90 bp ATACTCCAGAGTTCTATCATCAATGACATCTATCAGGGGGCACACCACCATTTTCAGGCTGTTCACAGATaGCTCCAACTCTGGGAAGAC +
Preference number: 4 (lower is better)
Translates to: ILQSSIINDIYQGAHHHFQAVHR*LQLWED
Trigger: GTCTTCCCAGAGTTGGAGGCATCTGTGAACAGCCTG...AAAATGGTGGTGTGCCCCCTGATAGATGTCATTGATGATAGAACTCTGGAGTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR GCA 90 bp TGCATTTCACGTAATTCCACGATGTTCCAAACTTACACTCTTGTGACACTATGTGGCAGGGATACAGGCTaGATAGCTGCACTTGCAGGC +
Preference number: 4 (lower is better)
Translates to: CISRNSTMFQTYTLVTLCGRDTG*IAALAG
Trigger: GCCTGCAAGTGCAGCTATGCAGCCTGTATCCCTGCC...ACATAGTGTCACAAGAGTGTAAGTTTGGAACATCGTGGAATTACGTGAAATGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416269.6
CDS-3UTR CCA 90 bp AATTTCTTCAAGAAAATAGTGTGGCGTGAGGTTCGTGACACTGGACATGGTCTGAGGCTTTATGGTGGCTaGGTTCCAAGCAGATACCTG +
Preference number: 4 (lower is better)
Translates to: NFFKKIVWREVRDTGHGLRLYGG*VPSRYL
Trigger: CAGGTATCTGCTTGGAACCCAGCCACCATAAAGCCT...CAGACCATGTCCAGTGTCACGAACCTCACGCCACACTATTTTCTTGAAGAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414073.6
ENST00000416269.6
ENST00000426341.6
CDS-3UTR CCA 90 bp CTGATATGTCCTACTCGAGAGCAGGGGATTATAAAGAGTTGGCCTCCACACATCTTTACTCCTGGTATCTaGCACTTCTCTTTCGATGCC +
Preference number: 4 (lower is better)
Translates to: LICPTREQGIIKSWPPHIFTPGI*HFSFDA
Trigger: GGCATCGAAAGAGAAGTGCCAGATACCAGGAGTAAA...GATGTGTGGAGGCCAACTCTTTATAATCCCCTGCTCTCGAGTAGGACATATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR CCA 90 bp TTCTTACTGATATGTCCTACTCGAGAGCAGGGGATTATAAAGAGTTGGCCTCCAAGTCGGGAGGCGGGCTaGGTAATGTTTTTGAAGACA +
Preference number: 4 (lower is better)
Translates to: FLLICPTREQGIIKSWPPSREAG*VMFLKT
Trigger: TGTCTTCAAAAACATTACCCAGCCCGCCTCCCGACT...TGGAGGCCAACTCTTTATAATCCCCTGCTCTCGAGTAGGACATATCAGTAAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414073.6
ENST00000416269.6
ENST00000426341.6
CDS-3UTR CCA 90 bp GCCATGAGCCAGGCCTTAACTGCAGTTGGTCTGATTCCGCTTCTTTCATGGAATTTCAAGAAAATAGTGTaGCGTGAGGTTCGTGACACT +
Preference number: 4 (lower is better)
Translates to: AMSQALTAVGLIPLLSWNFKKIV*REVRDT
Trigger: AGTGTCACGAACCTCACGCCACACTATTTTCTTGAA...ATTCCATGAAAGAAGCGGAATCAGACCAACTGCAGTTAAGGCCTGGCTCATGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416269.6
CDS-3UTR CCA 90 bp TGCATTTCACGTAATTCCACGATGTTCCAAACTTACACTCTTGTGACACTATGTCAATGCTGGTTGTGCTaGGTTGCGGGGCCACACAGT +
Preference number: 4 (lower is better)
Translates to: CISRNSTMFQTYTLVTLCQCWLC*VAGPHS
Trigger: ACTGTGTGGCCCCGCAACCCAGCACAACCAGCATTG...ACATAGTGTCACAAGAGTGTAAGTTTGGAACATCGTGGAATTACGTGAAATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431418.6
CDS-3UTR TCA 90 bp TGGATGTTGTGTCATCTCGTTCAAACACTTCTCCTTATTTGCATCTTTTTGACTAGAGTCACAGCTGAATaGGGCAGGGGTCTGTGCCGA +
Preference number: 4 (lower is better)
Translates to: WMLCHLVQTLLLICIFLTRVTAE*GRGLCR
Trigger: TCGGCACAGACCCCTGCCTCATTCAGCTGTGACTCT...AGTCAAAAAGATGCAAATAAGGAGAAGTGTTTGAACGAGATGACACAACATCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414073.6
ENST00000416269.6
ENST00000426341.6
CDS-3UTR TCA 90 bp AATTGCATTTCACGTAATTCCACGATGTTCCAAACTTACACTCTTGTGACACTATCCAGGGGACCAAGCTaGCAGAGGCTCCTGGCTTTT +
Preference number: 4 (lower is better)
Translates to: NCISRNSTMFQTYTLVTLSRGPS*QRLLAF
Trigger: AAAAGCCAGGAGCCTCTGTCAGCTTGGTCCCCTGGA...TAGTGTCACAAGAGTGTAAGTTTGGAACATCGTGGAATTACGTGAAATGCAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392800.7
ENST00000414073.6
ENST00000416269.6
ENST00000431418.6
ENST00000616416.4
CDS-3UTR TCA 90 bp GGGCTTATACTCCAGAGTTCTATCATCAATGACATCTATCAGGGGGCACACCACACACTGGACATGGTCTaGAACAAGGCATTACATTCT +
Preference number: 4 (lower is better)
Translates to: GLILQSSIINDIYQGAHHTLDMV*NKALHS
Trigger: AGAATGTAATGCCTTGTTTCAGACCATGTCCAGTGT...GTGGTGTGCCCCCTGATAGATGTCATTGATGATAGAACTCTGGAGTATAAGCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414073.6
ENST00000416269.6
ENST00000426341.6
CDS-3UTR TCA 90 bp TCCAGAGTTCTATCATCAATGACATCTATCAGGGGGCACACCACCATTTTGGGGACACTGGACATGGTCTaGAACAAGGCATTACATTCT +
Preference number: 4 (lower is better)
Translates to: SRVLSSMTSIRGHTTILGTLDMV*NKALHS
Trigger: AGAATGTAATGCCTTGTTTCAGACCATGTCCAGTGT...CCCCAAAATGGTGGTGTGCCCCCTGATAGATGTCATTGATGATAGAACTCTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000414073.6
ENST00000416269.6
ENST00000426341.6
CDS-3UTR TCA 90 bp GGGCTTATACTCCAGAGTTCTATCATCAATGACATCTATCAGGGGGCACACCACCAGTTTGTTTCTTACTaGTATGTCCTACTCGAGAGC +
Preference number: 4 (lower is better)
Translates to: GLILQSSIINDIYQGAHHQFVSY*YVLLES
Trigger: GCTCTCGAGTAGGACATATCAGTAAGAAACAAACTG...GTGGTGTGCCCCCTGATAGATGTCATTGATGATAGAACTCTGGAGTATAAGCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR TCA 90 bp AGGAGAGGGCTTATACTCCAGAGTTCTATCATCAATGACATCTATCAGGGGGCAGATGTAAGAGGTGTGTaGTTGGCCTTTGGACTTTGT +
Preference number: 4 (lower is better)
Translates to: RRGLILQSSIINDIYQGADVRGV*LAFGLC
Trigger: ACAAAGTCCAAAGGCCAATCACACACCTCTTACATC...TGCCCCCTGATAGATGTCATTGATGATAGAACTCTGGAGTATAAGCCCTCTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000414073.6
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR GCA 90 bp TACAAGAGGAGAGGGCTTATACTCCAGAGTTCTATCATCAATGACATCTATCAGCAGGCTGTTCACAGATaGCTCCAACTCTGGGAAGAC +
Preference number: 4 (lower is better)
Translates to: YKRRGLILQSSIINDIYQQAVHR*LQLWED
Trigger: GTCTTCCCAGAGTTGGAGGCATCTGTGAACAGCCTG...CTGATAGATGTCATTGATGATAGAACTCTGGAGTATAAGCCCTCTCCTCTTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR GCA 90 bp TGCATTTCACGTAATTCCACGATGTTCCAAACTTACACTCTTGTGACACTATGTATTCAATGCTGGTTGTaGTGGGTTGCGGGGCCACAC +
Preference number: 4 (lower is better)
Translates to: CISRNSTMFQTYTLVTLCIQCWL*WVAGPH
Trigger: GTGTGGCCCCGCAACCCAGCACAACCAGCATTGAAT...ACATAGTGTCACAAGAGTGTAAGTTTGGAACATCGTGGAATTACGTGAAATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431418.6
CDS-3UTR CCA 90 bp TTATACTCCAGAGTTCTATCATCAATGACATCTATCAGGGGGCACACCACCATTAGGCTTTATGGTGGCTaGGTTCCAAGCAGATACCTG +
Preference number: 4 (lower is better)
Translates to: LYSRVLSSMTSIRGHTTIRLYGG*VPSRYL
Trigger: CAGGTATCTGCTTGGAACCCAGCCACCATAAAGCCT...AATGGTGGTGTGCCCCCTGATAGATGTCATTGATGATAGAACTCTGGAGTATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR CCA 90 bp TTTAATTGCATTTCACGTAATTCCACGATGTTCCAAACTTACACTCTTGTGACATGGGGTCCTTGGCAATaGCATGCAGCAGGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: FNCISRNSTMFQTYTLVTWGPWQ*HAAGAP
Trigger: TGGAGCCCCTGCTGCATGCCATTGCCAAGGACCCCA...TGTCACAAGAGTGTAAGTTTGGAACATCGTGGAATTACGTGAAATGCAATTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000392800.7
ENST00000414073.6
ENST00000416269.6
ENST00000431418.6
ENST00000616416.4
CDS-3UTR CCA 90 bp TGCATTTCACGTAATTCCACGATGTTCCAAACTTACACTCTTGTGACACTATGTCCATTTTGGGGTCCTTaGCAATGGCATGCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: CISRNSTMFQTYTLVTLCPFWGP*QWHAAG
Trigger: CCCTGCTGCATGCCATTGCCAAGGACCCCAAAATGG...ACATAGTGTCACAAGAGTGTAAGTTTGGAACATCGTGGAATTACGTGAAATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000392800.7
ENST00000414073.6
ENST00000416269.6
ENST00000431418.6
ENST00000616416.4
CDS-3UTR CCA 90 bp CTGATATGTCCTACTCGAGAGCAGGGGATTATAAAGAGTTGGCCTCCACACATCTGTGTGATTGGCCTTTaGACTTTGTGTCTTCAGAAG +
Preference number: 4 (lower is better)
Translates to: LICPTREQGIIKSWPPHICVIGL*TLCLQK
Trigger: CTTCTGAAGACACAAAGTCCAAAGGCCAATCACACA...GATGTGTGGAGGCCAACTCTTTATAATCCCCTGCTCTCGAGTAGGACATATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414073.6
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR CCA 90 bp AGTTGGCCTCCACACATCCAGATCCTTAGTGAAAGTTCCAAATTTTCTCTTCCCGGCCTTAACTGCAGTTaGTCTGATTCCGCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: SWPPHIQILSESSKFSLPGLNCS*SDSASF
Trigger: GAAAGAAGCGGAATCAGACCAACTGCAGTTAAGGCC...GGGAAGAGAAAATTTGGAACTTTCACTAAGGATCTGGATGTGTGGAGGCCAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416269.6
CDS-3UTR TCA 90 bp AATTTCTTCAAGAAAATAGTGTGGCGTGAGGTTCGTGACACTGGACATGGTCTGGGGGTCTGTGCCGAATaGACTGAGAGATGTAAAATT +
Preference number: 4 (lower is better)
Translates to: NFFKKIVWREVRDTGHGLGVCAE*TERCKI
Trigger: AATTTTACATCTCTCAGTTCATTCGGCACAGACCCC...CAGACCATGTCCAGTGTCACGAACCTCACGCCACACTATTTTCTTGAAGAAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000414073.6
ENST00000416269.6
ENST00000426341.6
CDS-3UTR TCA 90 bp AGTTGGCCTCCACACATCCAGATCCTTAGTGAAAGTTCCAAATTTTCTCTTCCCGGGGTCTGTGCCGAATaGACTGAGAGATGTAAAATT +
Preference number: 4 (lower is better)
Translates to: SWPPHIQILSESSKFSLPGVCAE*TERCKI
Trigger: AATTTTACATCTCTCAGTTCATTCGGCACAGACCCC...GGGAAGAGAAAATTTGGAACTTTCACTAAGGATCTGGATGTGTGGAGGCCAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR TCA 90 bp TTTAATTGCATTTCACGTAATTCCACGATGTTCCAAACTTACACTCTTGTGACAAGAGTCACAGCTGAATaGGGCAGGGGTCTGTGCCGA +
Preference number: 4 (lower is better)
Translates to: FNCISRNSTMFQTYTLVTRVTAE*GRGLCR
Trigger: TCGGCACAGACCCCTGCCTCATTCAGCTGTGACTCT...TGTCACAAGAGTGTAAGTTTGGAACATCGTGGAATTACGTGAAATGCAATTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392800.7
ENST00000414073.6
ENST00000416269.6
ENST00000616416.4
CDS-3UTR TCA 90 bp AATTGCATTTCACGTAATTCCACGATGTTCCAAACTTACACTCTTGTGACACTAAAGCAGAGTCACAGCTaGATGAGGCAGGGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: NCISRNSTMFQTYTLVTLKQSHS*MRQGSV
Trigger: CACAGACCCCTGCCTCATTCAGCTGTGACTCTGCTT...TAGTGTCACAAGAGTGTAAGTTTGGAACATCGTGGAATTACGTGAAATGCAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392800.7
ENST00000414073.6
ENST00000416269.6
ENST00000616416.4
CDS-3UTR TCA 90 bp AGGAGAGGGCTTATACTCCAGAGTTCTATCATCAATGACATCTATCAGGGGGCATGCCAGCTGCTCACATaGTTATGGTGCAAATATATG +
Preference number: 4 (lower is better)
Translates to: RRGLILQSSIINDIYQGACQLLT*LWCKYM
Trigger: CATATATTTGCACCATAATCATGTGAGCAGCTGGCA...TGCCCCCTGATAGATGTCATTGATGATAGAACTCTGGAGTATAAGCCCTCTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR TCA 90 bp TTTAATTGCATTTCACGTAATTCCACGATGTTCCAAACTTACACTCTTGTGACATCCAGGGGACCAAGCTaGCAGAGGCTCCTGGCTTTT +
Preference number: 4 (lower is better)
Translates to: FNCISRNSTMFQTYTLVTSRGPS*QRLLAF
Trigger: AAAAGCCAGGAGCCTCTGTCAGCTTGGTCCCCTGGA...TGTCACAAGAGTGTAAGTTTGGAACATCGTGGAATTACGTGAAATGCAATTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392800.7
ENST00000414073.6
ENST00000416269.6
ENST00000431418.6
ENST00000616416.4
CDS-3UTR TCA 90 bp AAGAGGAGAGGGCTTATACTCCAGAGTTCTATCATCAATGACATCTATCAGGGGGAGTTCTATCATCAATaGCATCTATCAGGGGGCACA +
Preference number: 4 (lower is better)
Translates to: KRRGLILQSSIINDIYQGEFYHQ*HLSGGT
Trigger: TGTGCCCCCTGATAGATGTCATTGATGATAGAACTC...CCCCTGATAGATGTCATTGATGATAGAACTCTGGAGTATAAGCCCTCTCCTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR TCA 90 bp AGTTGGCCTCCACACATCCAGATCCTTAGTGAAAGTTCCAAATTTTCTCTTCCCGATGTAAGAGGTGTGTaGTTGGCCTTTGGACTTTGT +
Preference number: 4 (lower is better)
Translates to: SWPPHIQILSESSKFSLPDVRGV*LAFGLC
Trigger: ACAAAGTCCAAAGGCCAATCACACACCTCTTACATC...GGGAAGAGAAAATTTGGAACTTTCACTAAGGATCTGGATGTGTGGAGGCCAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414073.6
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR TCA 90 bp AAGAGGAGAGGGCTTATACTCCAGAGTTCTATCATCAATGACATCTATCAGGGGGATGTAAGAGGTGTGTaGTTGGCCTTTGGACTTTGT +
Preference number: 4 (lower is better)
Translates to: KRRGLILQSSIINDIYQGDVRGV*LAFGLC
Trigger: ACAAAGTCCAAAGGCCAATCACACACCTCTTACATC...CCCCTGATAGATGTCATTGATGATAGAACTCTGGAGTATAAGCCCTCTCCTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000414073.6
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR TCA 90 bp TTCTTACTGATATGTCCTACTCGAGAGCAGGGGATTATAAAGAGTTGGCCTCCAGATGTAAGAGGTGTGTaGTTGGCCTTTGGACTTTGT +
Preference number: 4 (lower is better)
Translates to: FLLICPTREQGIIKSWPPDVRGV*LAFGLC
Trigger: ACAAAGTCCAAAGGCCAATCACACACCTCTTACATC...TGGAGGCCAACTCTTTATAATCCCCTGCTCTCGAGTAGGACATATCAGTAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414073.6
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR GCA 90 bp TGCATTTCACGTAATTCCACGATGTTCCAAACTTACACTCTTGTGACACTATGTAGCTCCAATCAGCCTTaGTCGAATCAGCCCCTCTCT +
Preference number: 4 (lower is better)
Translates to: CISRNSTMFQTYTLVTLCSSNQP*SNQPLS
Trigger: AGAGAGGGGCTGATTCGAGCAAGGCTGATTGGAGCT...ACATAGTGTCACAAGAGTGTAAGTTTGGAACATCGTGGAATTACGTGAAATGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392800.7
ENST00000414073.6
ENST00000416269.6
ENST00000431418.6
ENST00000616416.4
CDS-3UTR GCA 90 bp CTTACTGATATGTCCTACTCGAGAGCAGGGGATTATAAAGAGTTGGCCTCCACAACCACTGAAATGACTTaGAACCCAGTCGTTTCCTTA +
Preference number: 4 (lower is better)
Translates to: LTDMSYSRAGDYKELASTTTEMT*NPVVSL
Trigger: TAAGGAAACGACTGGGTTGCAAGTCATTTCAGTGGT...TGTGGAGGCCAACTCTTTATAATCCCCTGCTCTCGAGTAGGACATATCAGTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR GCA 90 bp AGAGGAGAGGGCTTATACTCCAGAGTTCTATCATCAATGACATCTATCAGGGGGACCACTGAAATGACTTaGAACCCAGTCGTTTCCTTA +
Preference number: 4 (lower is better)
Translates to: RGEGLYSRVLSSMTSIRGTTEMT*NPVVSL
Trigger: TAAGGAAACGACTGGGTTGCAAGTCATTTCAGTGGT...CCCCCTGATAGATGTCATTGATGATAGAACTCTGGAGTATAAGCCCTCTCCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR GCA 90 bp TGCATTTCACGTAATTCCACGATGTTCCAAACTTACACTCTTGTGACACTATGTCAGGCTGTTCACAGATaGCTCCAACTCTGGGAAGAC +
Preference number: 4 (lower is better)
Translates to: CISRNSTMFQTYTLVTLCQAVHR*LQLWED
Trigger: GTCTTCCCAGAGTTGGAGGCATCTGTGAACAGCCTG...ACATAGTGTCACAAGAGTGTAAGTTTGGAACATCGTGGAATTACGTGAAATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392800.7
ENST00000414073.6
ENST00000416269.6
ENST00000431418.6
ENST00000616416.4
CDS-3UTR GCA 90 bp TGCATTTCACGTAATTCCACGATGTTCCAAACTTACACTCTTGTGACACTATGTGAGCCAGGCCTTAACTaGAGTTGGTCTGATTCCGCT +
Preference number: 4 (lower is better)
Translates to: CISRNSTMFQTYTLVTLCEPGLN*SWSDSA
Trigger: AGCGGAATCAGACCAACTGCAGTTAAGGCCTGGCTC...ACATAGTGTCACAAGAGTGTAAGTTTGGAACATCGTGGAATTACGTGAAATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416269.6
CDS-3UTR CCA 90 bp AGGTTTTCCAGTTTGTTTCTTACTGATATGTCCTACTCGAGAGCAGGGGATTATAGGCTTTATGGTGGCTaGGTTCCAAGCAGATACCTG +
Preference number: 4 (lower is better)
Translates to: RFSSLFLTDMSYSRAGDYRLYGG*VPSRYL
Trigger: CAGGTATCTGCTTGGAACCCAGCCACCATAAAGCCT...ATAATCCCCTGCTCTCGAGTAGGACATATCAGTAAGAAACAAACTGGAAAACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR CCA 90 bp AATTGCATTTCACGTAATTCCACGATGTTCCAAACTTACACTCTTGTGACACTACCATTTTGGGGTCCTTaGCAATGGCATGCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: NCISRNSTMFQTYTLVTLPFWGP*QWHAAG
Trigger: CCCTGCTGCATGCCATTGCCAAGGACCCCAAAATGG...TAGTGTCACAAGAGTGTAAGTTTGGAACATCGTGGAATTACGTGAAATGCAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000392800.7
ENST00000414073.6
ENST00000416269.6
ENST00000431418.6
ENST00000616416.4
CDS-3UTR CCA 90 bp TGCATTTCACGTAATTCCACGATGTTCCAAACTTACACTCTTGTGACACTATGTGGCACACCACCATTTTaGGGTCCTTGGCAATGGCAT +
Preference number: 4 (lower is better)
Translates to: CISRNSTMFQTYTLVTLCGTPPF*GPWQWH
Trigger: ATGCCATTGCCAAGGACCCCAAAATGGTGGTGTGCC...ACATAGTGTCACAAGAGTGTAAGTTTGGAACATCGTGGAATTACGTGAAATGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392800.7
ENST00000414073.6
ENST00000416269.6
ENST00000431418.6
ENST00000616416.4
CDS-3UTR CCA 90 bp CATCTAAATGCCTTGGATGTTGTGTCATCTCGTTCAAACACTTCTCCTTATTTGGGCACACCACCATTTTaGGGTCCTTGGCAATGGCAT +
Preference number: 4 (lower is better)
Translates to: HLNALDVVSSRSNTSPYLGTPPF*GPWQWH
Trigger: ATGCCATTGCCAAGGACCCCAAAATGGTGGTGTGCC...CAAATAAGGAGAAGTGTTTGAACGAGATGACACAACATCCAAGGCATTTAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414073.6
ENST00000416269.6
ENST00000426341.6
CDS-3UTR CCA 90 bp AATTGCATTTCACGTAATTCCACGATGTTCCAAACTTACACTCTTGTGACACTATTCCAAGCAGATACCTaGTTGTGCTGGGTTGCGGGG +
Preference number: 4 (lower is better)
Translates to: NCISRNSTMFQTYTLVTLFQADT*LCWVAG
Trigger: CCCCGCAACCCAGCACAACCAGGTATCTGCTTGGAA...TAGTGTCACAAGAGTGTAAGTTTGGAACATCGTGGAATTACGTGAAATGCAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416269.6
CDS-3UTR TCA 90 bp CTGATATGTCCTACTCGAGAGCAGGGGATTATAAAGAGTTGGCCTCCACACATCTATGGTGCAAATATATaGATAACAGAGCTGTCCAGA +
Preference number: 4 (lower is better)
Translates to: LICPTREQGIIKSWPPHIYGANI*ITELSR
Trigger: TCTGGACAGCTCTGTTATTCATATATTTGCACCATA...GATGTGTGGAGGCCAACTCTTTATAATCCCCTGCTCTCGAGTAGGACATATCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR TCA 90 bp GGGCTTATACTCCAGAGTTCTATCATCAATGACATCTATCAGGGGGCACACCACTATGGTGCAAATATATaGATAACAGAGCTGTCCAGA +
Preference number: 4 (lower is better)
Translates to: GLILQSSIINDIYQGAHHYGANI*ITELSR
Trigger: TCTGGACAGCTCTGTTATTCATATATTTGCACCATA...GTGGTGTGCCCCCTGATAGATGTCATTGATGATAGAACTCTGGAGTATAAGCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR TCA 90 bp TCCAGAGTTCTATCATCAATGACATCTATCAGGGGGCACACCACCATTTTGGGGTTTTGGTATTTGCTCTaGGCCATAGATAATTTGCTG +
Preference number: 4 (lower is better)
Translates to: SRVLSSMTSIRGHTTILGFWYLL*AIDNLL
Trigger: CAGCAAATTATCTATGGCTCAGAGCAAATACCAAAA...CCCCAAAATGGTGGTGTGCCCCCTGATAGATGTCATTGATGATAGAACTCTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR TCA 90 bp AAGAGGAGAGGGCTTATACTCCAGAGTTCTATCATCAATGACATCTATCAGGGGACACTGGACATGGTCTaGAACAAGGCATTACATTCT +
Preference number: 4 (lower is better)
Translates to: KRRGLILQSSIINDIYQGTLDMV*NKALHS
Trigger: AGAATGTAATGCCTTGTTTCAGACCATGTCCAGTGT...CCCCTGATAGATGTCATTGATGATAGAACTCTGGAGTATAAGCCCTCTCCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414073.6
ENST00000416269.6
ENST00000426341.6
CDS-3UTR TCA 90 bp TGCATTTCACGTAATTCCACGATGTTCCAAACTTACACTCTTGTGACACTATGTACATCCCCTGAAGCATaGGAAGCTCCAATCAGCCTT +
Preference number: 4 (lower is better)
Translates to: CISRNSTMFQTYTLVTLCTSPEA*EAPISL
Trigger: AAGGCTGATTGGAGCTTCTCATGCTTCAGGGGATGT...ACATAGTGTCACAAGAGTGTAAGTTTGGAACATCGTGGAATTACGTGAAATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392800.7
ENST00000414073.6
ENST00000416269.6
ENST00000431418.6
ENST00000616416.4
CDS-3UTR TCA 90 bp CTTATACTCCAGAGTTCTATCATCAATGACATCTATCAGGGGGCACACCACCATGAATATTTCCGTAGGTaGCATATTTCAGACCAGGCT +
Preference number: 4 (lower is better)
Translates to: LILQSSIINDIYQGAHHHEYFRR*HISDQA
Trigger: AGCCTGGTCTGAAATATGTCACCTACGGAAATATTC...ATGGTGGTGTGCCCCCTGATAGATGTCATTGATGATAGAACTCTGGAGTATAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR TCA 90 bp AGTTGGCCTCCACACATCCAGATCCTTAGTGAAAGTTCCAAATTTTCTCTTCCCCAAATACCACTGAAATaGCTTGCAACCCAGTCGTTT +
Preference number: 4 (lower is better)
Translates to: SWPPHIQILSESSKFSLPQIPLK*LATQSF
Trigger: AAACGACTGGGTTGCAAGTCATTTCAGTGGTATTTG...GGGAAGAGAAAATTTGGAACTTTCACTAAGGATCTGGATGTGTGGAGGCCAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR TCA 90 bp TCCCCTTACAAGAGGAGAGGGCTTATACTCCAGAGTTCTATCATCAATGACATCCAGAATTCAATGCCTTaGGATAATTGCATTGGCTGC +
Preference number: 4 (lower is better)
Translates to: SPYKRRGLILQSSIINDIQNSMP*DNCIGC
Trigger: GCAGCCAATGCAATTATCTCAAGGCATTGAATTCTG...GATGTCATTGATGATAGAACTCTGGAGTATAAGCCCTCTCCTCTTGTAAGGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414073.6
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR TCA 90 bp CGACGTATAGCAAAAATTCCTCCAGACATTGCAGGTGACCGGATTGGTTTAGTACAGAATTCAATGCCTTaGGATAATTGCATTGGCTGC +
Preference number: 4 (lower is better)
Translates to: RRIAKIPPDIAGDRIGLVQNSMP*DNCIGC
Trigger: GCAGCCAATGCAATTATCTCAAGGCATTGAATTCTG...TACTAAACCAATCCGGTCACCTGCAATGTCTGGAGGAATTTTTGCTATACGTCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000414073.6
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR GCA 90 bp AGTTGGCCTCCACACATCCAGATCCTTAGTGAAAGTTCCAAATTTTCTCTTCCCTTTTCTTCTGCCAGCTaGTCACATGATTATGGTGCA +
Preference number: 4 (lower is better)
Translates to: SWPPHIQILSESSKFSLPFSSAS*SHDYGA
Trigger: TGCACCATAATCATGTGAGCAGCTGGCAGAAGAAAA...GGGAAGAGAAAATTTGGAACTTTCACTAAGGATCTGGATGTGTGGAGGCCAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR GCA 90 bp AATTGCATTTCACGTAATTCCACGATGTTCCAAACTTACACTCTTGTGACACTAAGCTCCAATCAGCCTTaGTCGAATCAGCCCCTCTCT +
Preference number: 4 (lower is better)
Translates to: NCISRNSTMFQTYTLVTLSSNQP*SNQPLS
Trigger: AGAGAGGGGCTGATTCGAGCAAGGCTGATTGGAGCT...TAGTGTCACAAGAGTGTAAGTTTGGAACATCGTGGAATTACGTGAAATGCAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392800.7
ENST00000414073.6
ENST00000416269.6
ENST00000431418.6
ENST00000616416.4
CDS-3UTR GCA 90 bp AATTGCATTTCACGTAATTCCACGATGTTCCAAACTTACACTCTTGTGACACTACAGGCTGTTCACAGATaGCTCCAACTCTGGGAAGAC +
Preference number: 4 (lower is better)
Translates to: NCISRNSTMFQTYTLVTLQAVHR*LQLWED
Trigger: GTCTTCCCAGAGTTGGAGGCATCTGTGAACAGCCTG...TAGTGTCACAAGAGTGTAAGTTTGGAACATCGTGGAATTACGTGAAATGCAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392800.7
ENST00000414073.6
ENST00000416269.6
ENST00000431418.6
ENST00000616416.4
CDS-3UTR GCA 90 bp CTTACTGATATGTCCTACTCGAGAGCAGGGGATTATAAAGAGTTGGCCTCCACAAACCATCCATCTAAATaGCTTGGATGTTGTGTCATC +
Preference number: 4 (lower is better)
Translates to: LTDMSYSRAGDYKELASTNHPSK*LGCCVI
Trigger: GATGACACAACATCCAAGGCATTTAGATGGATGGTT...TGTGGAGGCCAACTCTTTATAATCCCCTGCTCTCGAGTAGGACATATCAGTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414073.6
ENST00000416269.6
ENST00000426341.6
CDS-3UTR CCA 90 bp TGCATTTCACGTAATTCCACGATGTTCCAAACTTACACTCTTGTGACACTATGTAGGCTTTATGGTGGCTaGGTTCCAAGCAGATACCTG +
Preference number: 4 (lower is better)
Translates to: CISRNSTMFQTYTLVTLCRLYGG*VPSRYL
Trigger: CAGGTATCTGCTTGGAACCCAGCCACCATAAAGCCT...ACATAGTGTCACAAGAGTGTAAGTTTGGAACATCGTGGAATTACGTGAAATGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392800.7
ENST00000414073.6
ENST00000416269.6
ENST00000616416.4
CDS-3UTR CCA 90 bp TTTAATTGCATTTCACGTAATTCCACGATGTTCCAAACTTACACTCTTGTGACAGCTGACAGAGGCTCCTaGCTTTTCTTCTGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: FNCISRNSTMFQTYTLVTADRGS*LFFCQL
Trigger: CAGCTGGCAGAAGAAAAGCCAGGAGCCTCTGTCAGC...TGTCACAAGAGTGTAAGTTTGGAACATCGTGGAATTACGTGAAATGCAATTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392800.7
ENST00000414073.6
ENST00000416269.6
ENST00000431418.6
ENST00000616416.4
CDS-3UTR CCA 90 bp GGAGGCGGGCTGGGTAATGTTTTTGAAGACACCTGCAGGCAGAAGCAATATGAAAGTTCTGGGTTTGTATaGTTAAAATCTGTACCTAAC +
Preference number: 4 (lower is better)
Translates to: GGGLGNVFEDTCRQKQYESSGFV*LKSVPN
Trigger: GTTAGGTACAGATTTTAACCATACAAACCCAGAACT...TTCATATTGCTTCTGCCTGCAGGTGTCTTCAAAAACATTACCCAGCCCGCCTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414073.6
ENST00000416269.6
ENST00000426341.6
CDS-3UTR CCA 90 bp CAATCAAAAGTTCCCCTTACAAGAGGAGAGGGCTTATACTCCAGAGTTCTATCATTTACTCCTGGTATCTaGCACTTCTCTTTCGATGCC +
Preference number: 4 (lower is better)
Translates to: QSKVPLTRGEGLYSRVLSFTPGI*HFSFDA
Trigger: GGCATCGAAAGAGAAGTGCCAGATACCAGGAGTAAA...TGATAGAACTCTGGAGTATAAGCCCTCTCCTCTTGTAAGGGGAACTTTTGATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR CCA 90 bp TTATACTCCAGAGTTCTATCATCAATGACATCTATCAGGGGGCACACCACCATTTTTACTCCTGGTATCTaGCACTTCTCTTTCGATGCC +
Preference number: 4 (lower is better)
Translates to: LYSRVLSSMTSIRGHTTIFTPGI*HFSFDA
Trigger: GGCATCGAAAGAGAAGTGCCAGATACCAGGAGTAAA...AATGGTGGTGTGCCCCCTGATAGATGTCATTGATGATAGAACTCTGGAGTATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR CCA 90 bp ATACTCCAGAGTTCTATCATCAATGACATCTATCAGGGGGCACACCACCATTTTTTTACTCCTGGTATCTaGCACTTCTCTTTCGATGCC +
Preference number: 4 (lower is better)
Translates to: ILQSSIINDIYQGAHHHFFTPGI*HFSFDA
Trigger: GGCATCGAAAGAGAAGTGCCAGATACCAGGAGTAAA...AAAATGGTGGTGTGCCCCCTGATAGATGTCATTGATGATAGAACTCTGGAGTAT
43% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR CCA 90 bp CTTATACTCCAGAGTTCTATCATCAATGACATCTATCAGGGGGCACACCACCATTTCAAGAAAATAGTGTaGCGTGAGGTTCGTGACACT +
Preference number: 4 (lower is better)
Translates to: LILQSSIINDIYQGAHHHFKKIV*REVRDT
Trigger: AGTGTCACGAACCTCACGCCACACTATTTTCTTGAA...ATGGTGGTGTGCCCCCTGATAGATGTCATTGATGATAGAACTCTGGAGTATAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414073.6
ENST00000416269.6
ENST00000426341.6
CDS-3UTR CCA 90 bp AATTGCATTTCACGTAATTCCACGATGTTCCAAACTTACACTCTTGTGACACTAGGCACACCACCATTTTaGGGTCCTTGGCAATGGCAT +
Preference number: 4 (lower is better)
Translates to: NCISRNSTMFQTYTLVTLGTPPF*GPWQWH
Trigger: ATGCCATTGCCAAGGACCCCAAAATGGTGGTGTGCC...TAGTGTCACAAGAGTGTAAGTTTGGAACATCGTGGAATTACGTGAAATGCAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392800.7
ENST00000414073.6
ENST00000416269.6
ENST00000431418.6
ENST00000616416.4
CDS-3UTR CCA 90 bp AGGAGAGGGCTTATACTCCAGAGTTCTATCATCAATGACATCTATCAGGGGGCAAGATGCCTCCAACTCTaGGAAGACATTATCCAAATA +
Preference number: 4 (lower is better)
Translates to: RRGLILQSSIINDIYQGARCLQL*EDIIQI
Trigger: TATTTGGATAATGTCTTCCCAGAGTTGGAGGCATCT...TGCCCCCTGATAGATGTCATTGATGATAGAACTCTGGAGTATAAGCCCTCTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR CCA 90 bp AATTTCTTCAAGAAAATAGTGTGGCGTGAGGTTCGTGACACTGGACATGGTCTGTGTGTGATTGGCCTTTaGACTTTGTGTCTTCAGAAG +
Preference number: 4 (lower is better)
Translates to: NFFKKIVWREVRDTGHGLCVIGL*TLCLQK
Trigger: CTTCTGAAGACACAAAGTCCAAAGGCCAATCACACA...CAGACCATGTCCAGTGTCACGAACCTCACGCCACACTATTTTCTTGAAGAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414073.6
ENST00000416269.6
ENST00000426341.6
CDS-3UTR CCA 90 bp AATTGCATTTCACGTAATTCCACGATGTTCCAAACTTACACTCTTGTGACACTATGCAGAATTCAATGCTaGTTGTGCTGGGTTGCGGGG +
Preference number: 4 (lower is better)
Translates to: NCISRNSTMFQTYTLVTLCRIQC*LCWVAG
Trigger: CCCCGCAACCCAGCACAACCAGCATTGAATTCTGCA...TAGTGTCACAAGAGTGTAAGTTTGGAACATCGTGGAATTACGTGAAATGCAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431418.6
CDS-3UTR TCA 90 bp ATACTCCAGAGTTCTATCATCAATGACATCTATCAGGGGGCACACCACCATTTTTGCCAGCTGCTCACATaGTTATGGTGCAAATATATG +
Preference number: 4 (lower is better)
Translates to: ILQSSIINDIYQGAHHHFCQLLT*LWCKYM
Trigger: CATATATTTGCACCATAATCATGTGAGCAGCTGGCA...AAAATGGTGGTGTGCCCCCTGATAGATGTCATTGATGATAGAACTCTGGAGTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR TCA 90 bp AATTGCATTTCACGTAATTCCACGATGTTCCAAACTTACACTCTTGTGACACTAACATCCCCTGAAGCATaGGAAGCTCCAATCAGCCTT +
Preference number: 4 (lower is better)
Translates to: NCISRNSTMFQTYTLVTLTSPEA*EAPISL
Trigger: AAGGCTGATTGGAGCTTCTCATGCTTCAGGGGATGT...TAGTGTCACAAGAGTGTAAGTTTGGAACATCGTGGAATTACGTGAAATGCAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392800.7
ENST00000414073.6
ENST00000416269.6
ENST00000431418.6
ENST00000616416.4
CDS-3UTR TCA 90 bp ACCATCCATCTAAATGCCTTGGATGTTGTGTCATCTCGTTCAAACACTTCTCCTCAAATACCACTGAAATaGCTTGCAACCCAGTCGTTT +
Preference number: 4 (lower is better)
Translates to: TIHLNALDVVSSRSNTSPQIPLK*LATQSF
Trigger: AAACGACTGGGTTGCAAGTCATTTCAGTGGTATTTG...AGGAGAAGTGTTTGAACGAGATGACACAACATCCAAGGCATTTAGATGGATGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414073.6
ENST00000416269.6
ENST00000426341.6
CDS-3UTR TCA 90 bp ATACTCCAGAGTTCTATCATCAATGACATCTATCAGGGGGCACACCACCATTTTCAAATACCACTGAAATaGCTTGCAACCCAGTCGTTT +
Preference number: 4 (lower is better)
Translates to: ILQSSIINDIYQGAHHHFQIPLK*LATQSF
Trigger: AAACGACTGGGTTGCAAGTCATTTCAGTGGTATTTG...AAAATGGTGGTGTGCCCCCTGATAGATGTCATTGATGATAGAACTCTGGAGTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR GCA 90 bp ATACTCCAGAGTTCTATCATCAATGACATCTATCAGGGGGCACACCACCATTTTTTTTCTTCTGCCAGCTaGTCACATGATTATGGTGCA +
Preference number: 4 (lower is better)
Translates to: ILQSSIINDIYQGAHHHFFSSAS*SHDYGA
Trigger: TGCACCATAATCATGTGAGCAGCTGGCAGAAGAAAA...AAAATGGTGGTGTGCCCCCTGATAGATGTCATTGATGATAGAACTCTGGAGTAT
42% GC, longest homopolymer 8 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR GCA 90 bp TTTAATTGCATTTCACGTAATTCCACGATGTTCCAAACTTACACTCTTGTGACAAGCTCCAATCAGCCTTaGTCGAATCAGCCCCTCTCT +
Preference number: 4 (lower is better)
Translates to: FNCISRNSTMFQTYTLVTSSNQP*SNQPLS
Trigger: AGAGAGGGGCTGATTCGAGCAAGGCTGATTGGAGCT...TGTCACAAGAGTGTAAGTTTGGAACATCGTGGAATTACGTGAAATGCAATTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392800.7
ENST00000414073.6
ENST00000416269.6
ENST00000431418.6
ENST00000616416.4
CDS-3UTR GCA 90 bp AATTTCTTCAAGAAAATAGTGTGGCGTGAGGTTCGTGACACTGGACATGGTCTGAACCATCCATCTAAATaGCTTGGATGTTGTGTCATC +
Preference number: 4 (lower is better)
Translates to: NFFKKIVWREVRDTGHGLNHPSK*LGCCVI
Trigger: GATGACACAACATCCAAGGCATTTAGATGGATGGTT...CAGACCATGTCCAGTGTCACGAACCTCACGCCACACTATTTTCTTGAAGAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414073.6
ENST00000416269.6
ENST00000426341.6
CDS-3UTR GCA 90 bp CTGATATGTCCTACTCGAGAGCAGGGGATTATAAAGAGTTGGCCTCCACACATCATCATCTCATTTTCCTaGATTAAGCCCTTAATAGCT +
Preference number: 4 (lower is better)
Translates to: LICPTREQGIIKSWPPHIIISFS*IKPLIA
Trigger: AGCTATTAAGGGCTTAATGCAGGAAAATGAGATGAT...GATGTGTGGAGGCCAACTCTTTATAATCCCCTGCTCTCGAGTAGGACATATCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414073.6
ENST00000416269.6
CDS-3UTR CCA 90 bp TCCAGAGTTCTATCATCAATGACATCTATCAGGGGGCACACCACCATTTTGGGGAGTTCTGGGTTTGTATaGTTAAAATCTGTACCTAAC +
Preference number: 4 (lower is better)
Translates to: SRVLSSMTSIRGHTTILGSSGFV*LKSVPN
Trigger: GTTAGGTACAGATTTTAACCATACAAACCCAGAACT...CCCCAAAATGGTGGTGTGCCCCCTGATAGATGTCATTGATGATAGAACTCTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR CCA 90 bp AATTGCATTTCACGTAATTCCACGATGTTCCAAACTTACACTCTTGTGACACTAAGTCGGGAGGCGGGCTaGGTAATGTTTTTGAAGACA +
Preference number: 4 (lower is better)
Translates to: NCISRNSTMFQTYTLVTLSREAG*VMFLKT
Trigger: TGTCTTCAAAAACATTACCCAGCCCGCCTCCCGACT...TAGTGTCACAAGAGTGTAAGTTTGGAACATCGTGGAATTACGTGAAATGCAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000392800.7
ENST00000414073.6
ENST00000416269.6
ENST00000431418.6
ENST00000616416.4
CDS-3UTR CCA 90 bp GGAGGGATCTTCTTCTTAACTGCAGTTGGTCTGATTCCGCTTCTTTCATGGAATAGATGCCTCCAACTCTaGGAAGACATTATCCAAATA +
Preference number: 4 (lower is better)
Translates to: GGIFFLTAVGLIPLLSWNRCLQL*EDIIQI
Trigger: TATTTGGATAATGTCTTCCCAGAGTTGGAGGCATCT...ATTCCATGAAAGAAGCGGAATCAGACCAACTGCAGTTAAGAAGAAGATCCCTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414073.6
CDS-3UTR CCA 90 bp AATTTCTTCAAGAAAATAGTGTGGCGTGAGGTTCGTGACACTGGACATGGTCTGAGATGCCTCCAACTCTaGGAAGACATTATCCAAATA +
Preference number: 4 (lower is better)
Translates to: NFFKKIVWREVRDTGHGLRCLQL*EDIIQI
Trigger: TATTTGGATAATGTCTTCCCAGAGTTGGAGGCATCT...CAGACCATGTCCAGTGTCACGAACCTCACGCCACACTATTTTCTTGAAGAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414073.6
ENST00000416269.6
ENST00000426341.6
3UTR CAA 72 bp TGTCATAGCACTGATGATTGTAGAAGGTTTTCCAGTTaGTTTCTTACTGATATGTCCTACTCGAGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: CHSTDDCRRFSS*FLTDMSYSRAG
Trigger: CCCTGCTCTCGAGTAGGACATATCAGTAAGAAACAAACTGGAAAACCTTCTACAATCATCAGTGCTATGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR TCA 90 bp CCCCTTACAAGAGGAGAGGGCTTATACTCCAGAGTTCTATCATCAATGACATCTTTTTTCAATTTCCCTTaGGATAATTGCATTGGCTGC +
Preference number: 4 (lower is better)
Translates to: PLTRGEGLYSRVLSSMTSFFNFP*DNCIGC
Trigger: GCAGCCAATGCAATTATCTCAAGGGAAATTGAAAAA...AGATGTCATTGATGATAGAACTCTGGAGTATAAGCCCTCTCCTCTTGTAAGGGG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000416062.5
CDS-3UTR TCA 90 bp GGTTTTCCAGTTTGTTTCTTACTGATATGTCCTACTCGAGAGCAGGGGATTATATGCCAGCTGCTCACATaGTTATGGTGCAAATATATG +
Preference number: 4 (lower is better)
Translates to: GFPVCFLLICPTREQGIICQLLT*LWCKYM
Trigger: CATATATTTGCACCATAATCATGTGAGCAGCTGGCA...TATAATCCCCTGCTCTCGAGTAGGACATATCAGTAAGAAACAAACTGGAAAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR TCA 90 bp CTTATACTCCAGAGTTCTATCATCAATGACATCTATCAGGGGGCACACCACCATTTTTGGTATTTGCTCTaGGCCATAGATAATTTGCTG +
Preference number: 4 (lower is better)
Translates to: LILQSSIINDIYQGAHHHFWYLL*AIDNLL
Trigger: CAGCAAATTATCTATGGCTCAGAGCAAATACCAAAA...ATGGTGGTGTGCCCCCTGATAGATGTCATTGATGATAGAACTCTGGAGTATAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR TCA 90 bp GCTCCTTATATTCATCCAGCCAAACGTGCACCAGTCTTAGGTAGTTATGTGTCATTTTGGTATTTGCTCTaGGCCATAGATAATTTGCTG +
Preference number: 4 (lower is better)
Translates to: APYIHPAKRAPVLGSYVSFWYLL*AIDNLL
Trigger: CAGCAAATTATCTATGGCTCAGAGCAAATACCAAAA...TGACACATAACTACCTAAGACTGGTGCACGTTTGGCTGGATGAATATAAGGAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR TCA 90 bp CCCCTTACAAGAGGAGAGGGCTTATACTCCAGAGTTCTATCATCAATGACATCTCTTCATCAGTCCTTTTaGCTATTACATGAGGTTTTG +
Preference number: 4 (lower is better)
Translates to: PLTRGEGLYSRVLSSMTSLHQSF*LLHEVL
Trigger: CAAAACCTCATGTAATAGTCAAAAGGACTGATGAAG...AGATGTCATTGATGATAGAACTCTGGAGTATAAGCCCTCTCCTCTTGTAAGGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR TCA 90 bp TTTAATTGCATTTCACGTAATTCCACGATGTTCCAAACTTACACTCTTGTGACAACATCCCCTGAAGCATaGGAAGCTCCAATCAGCCTT +
Preference number: 4 (lower is better)
Translates to: FNCISRNSTMFQTYTLVTTSPEA*EAPISL
Trigger: AAGGCTGATTGGAGCTTCTCATGCTTCAGGGGATGT...TGTCACAAGAGTGTAAGTTTGGAACATCGTGGAATTACGTGAAATGCAATTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392800.7
ENST00000414073.6
ENST00000416269.6
ENST00000431418.6
ENST00000616416.4
CDS-3UTR TCA 90 bp GGTTTTCCAGTTTGTTTCTTACTGATATGTCCTACTCGAGAGCAGGGGATTATACAGTTTGTTTCTTACTaGTATGTCCTACTCGAGAGC +
Preference number: 4 (lower is better)
Translates to: GFPVCFLLICPTREQGIIQFVSY*YVLLES
Trigger: GCTCTCGAGTAGGACATATCAGTAAGAAACAAACTG...TATAATCCCCTGCTCTCGAGTAGGACATATCAGTAAGAAACAAACTGGAAAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR TCA 90 bp TACAAGAGGAGAGGGCTTATACTCCAGAGTTCTATCATCAATGACATCTATCAGGAATATTTCCGTAGGTaGCATATTTCAGACCAGGCT +
Preference number: 4 (lower is better)
Translates to: YKRRGLILQSSIINDIYQEYFRR*HISDQA
Trigger: AGCCTGGTCTGAAATATGTCACCTACGGAAATATTC...CTGATAGATGTCATTGATGATAGAACTCTGGAGTATAAGCCCTCTCCTCTTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR TCA 90 bp CTTATACTCCAGAGTTCTATCATCAATGACATCTATCAGGGGGCACACCACCATCTTGTGACACTATGTTaGATGACTAGGAGACTTTTA +
Preference number: 4 (lower is better)
Translates to: LILQSSIINDIYQGAHHHLVTLC*MTRRLL
Trigger: TAAAAGTCTCCTAGTCATTCAACATAGTGTCACAAG...ATGGTGGTGTGCCCCCTGATAGATGTCATTGATGATAGAACTCTGGAGTATAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414073.6
ENST00000416269.6
CDS-3UTR TCA 90 bp GGTTTTCCAGTTTGTTTCTTACTGATATGTCCTACTCGAGAGCAGGGGATTATACAGAATTCAATGCCTTaGGATAATTGCATTGGCTGC +
Preference number: 4 (lower is better)
Translates to: GFPVCFLLICPTREQGIIQNSMP*DNCIGC
Trigger: GCAGCCAATGCAATTATCTCAAGGCATTGAATTCTG...TATAATCCCCTGCTCTCGAGTAGGACATATCAGTAAGAAACAAACTGGAAAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414073.6
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR GCA 90 bp AGGTTTTCCAGTTTGTTTCTTACTGATATGTCCTACTCGAGAGCAGGGGATTATTTTTCTTCTGCCAGCTaGTCACATGATTATGGTGCA +
Preference number: 4 (lower is better)
Translates to: RFSSLFLTDMSYSRAGDYFSSAS*SHDYGA
Trigger: TGCACCATAATCATGTGAGCAGCTGGCAGAAGAAAA...ATAATCCCCTGCTCTCGAGTAGGACATATCAGTAAGAAACAAACTGGAAAACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR GCA 90 bp GGTTTTCCAGTTTGTTTCTTACTGATATGTCCTACTCGAGAGCAGGGGATTATAACCACTGAAATGACTTaGAACCCAGTCGTTTCCTTA +
Preference number: 4 (lower is better)
Translates to: GFPVCFLLICPTREQGIITTEMT*NPVVSL
Trigger: TAAGGAAACGACTGGGTTGCAAGTCATTTCAGTGGT...TATAATCCCCTGCTCTCGAGTAGGACATATCAGTAAGAAACAAACTGGAAAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR GCA 90 bp AGGTTTTCCAGTTTGTTTCTTACTGATATGTCCTACTCGAGAGCAGGGGATTATACCACTGAAATGACTTaGAACCCAGTCGTTTCCTTA +
Preference number: 4 (lower is better)
Translates to: RFSSLFLTDMSYSRAGDYTTEMT*NPVVSL
Trigger: TAAGGAAACGACTGGGTTGCAAGTCATTTCAGTGGT...ATAATCCCCTGCTCTCGAGTAGGACATATCAGTAAGAAACAAACTGGAAAACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR CCA 90 bp CTTACTGATATGTCCTACTCGAGAGCAGGGGATTATAAAGAGTTGGCCTCCACAAGTTCTGGGTTTGTATaGTTAAAATCTGTACCTAAC +
Preference number: 4 (lower is better)
Translates to: LTDMSYSRAGDYKELASTSSGFV*LKSVPN
Trigger: GTTAGGTACAGATTTTAACCATACAAACCCAGAACT...TGTGGAGGCCAACTCTTTATAATCCCCTGCTCTCGAGTAGGACATATCAGTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR CCA 90 bp TGCATTTCACGTAATTCCACGATGTTCCAAACTTACACTCTTGTGACACTATGTTTTACTCCTGGTATCTaGCACTTCTCTTTCGATGCC +
Preference number: 4 (lower is better)
Translates to: CISRNSTMFQTYTLVTLCFTPGI*HFSFDA
Trigger: GGCATCGAAAGAGAAGTGCCAGATACCAGGAGTAAA...ACATAGTGTCACAAGAGTGTAAGTTTGGAACATCGTGGAATTACGTGAAATGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392800.7
ENST00000414073.6
ENST00000416269.6
ENST00000431418.6
ENST00000616416.4
CDS-3UTR CCA 90 bp TTTAATTGCATTTCACGTAATTCCACGATGTTCCAAACTTACACTCTTGTGACAAGTCGGGAGGCGGGCTaGGTAATGTTTTTGAAGACA +
Preference number: 4 (lower is better)
Translates to: FNCISRNSTMFQTYTLVTSREAG*VMFLKT
Trigger: TGTCTTCAAAAACATTACCCAGCCCGCCTCCCGACT...TGTCACAAGAGTGTAAGTTTGGAACATCGTGGAATTACGTGAAATGCAATTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000392800.7
ENST00000414073.6
ENST00000416269.6
ENST00000431418.6
ENST00000616416.4
CDS-3UTR CCA 90 bp CAATCAAAAGTTCCCCTTACAAGAGGAGAGGGCTTATACTCCAGAGTTCTATCAAGATGCCTCCAACTCTaGGAAGACATTATCCAAATA +
Preference number: 4 (lower is better)
Translates to: QSKVPLTRGEGLYSRVLSRCLQL*EDIIQI
Trigger: TATTTGGATAATGTCTTCCCAGAGTTGGAGGCATCT...TGATAGAACTCTGGAGTATAAGCCCTCTCCTCTTGTAAGGGGAACTTTTGATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR CCA 90 bp AGGTTTTCCAGTTTGTTTCTTACTGATATGTCCTACTCGAGAGCAGGGGATTATTGTGTGATTGGCCTTTaGACTTTGTGTCTTCAGAAG +
Preference number: 4 (lower is better)
Translates to: RFSSLFLTDMSYSRAGDYCVIGL*TLCLQK
Trigger: CTTCTGAAGACACAAAGTCCAAAGGCCAATCACACA...ATAATCCCCTGCTCTCGAGTAGGACATATCAGTAAGAAACAAACTGGAAAACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414073.6
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR CCA 90 bp AATCAAAAGTTCCCCTTACAAGAGGAGAGGGCTTATACTCCAGAGTTCTATCATTGTGTGATTGGCCTTTaGACTTTGTGTCTTCAGAAG +
Preference number: 4 (lower is better)
Translates to: NQKFPLQEERAYTPEFYHCVIGL*TLCLQK
Trigger: CTTCTGAAGACACAAAGTCCAAAGGCCAATCACACA...ATGATAGAACTCTGGAGTATAAGCCCTCTCCTCTTGTAAGGGGAACTTTTGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414073.6
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR TCA 90 bp AATTGCATTTCACGTAATTCCACGATGTTCCAAACTTACACTCTTGTGACACTAGGGGTCTGTGCCGAATaGACTGAGAGATGTAAAATT +
Preference number: 4 (lower is better)
Translates to: NCISRNSTMFQTYTLVTLGVCAE*TERCKI
Trigger: AATTTTACATCTCTCAGTTCATTCGGCACAGACCCC...TAGTGTCACAAGAGTGTAAGTTTGGAACATCGTGGAATTACGTGAAATGCAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392800.7
ENST00000414073.6
ENST00000416269.6
ENST00000616416.4
CDS-3UTR TCA 90 bp TGCATTTCACGTAATTCCACGATGTTCCAAACTTACACTCTTGTGACACTATGTTGCCAGCTGCTCACATaGTTATGGTGCAAATATATG +
Preference number: 4 (lower is better)
Translates to: CISRNSTMFQTYTLVTLCCQLLT*LWCKYM
Trigger: CATATATTTGCACCATAATCATGTGAGCAGCTGGCA...ACATAGTGTCACAAGAGTGTAAGTTTGGAACATCGTGGAATTACGTGAAATGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392800.7
ENST00000414073.6
ENST00000416269.6
ENST00000431418.6
ENST00000616416.4
CDS-3UTR TCA 90 bp CATCTAAATGCCTTGGATGTTGTGTCATCTCGTTCAAACACTTCTCCTTATTTGTGCCAGCTGCTCACATaGTTATGGTGCAAATATATG +
Preference number: 4 (lower is better)
Translates to: HLNALDVVSSRSNTSPYLCQLLT*LWCKYM
Trigger: CATATATTTGCACCATAATCATGTGAGCAGCTGGCA...CAAATAAGGAGAAGTGTTTGAACGAGATGACACAACATCCAAGGCATTTAGATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414073.6
ENST00000416269.6
ENST00000426341.6
CDS-3UTR TCA 90 bp ATACTCCAGAGTTCTATCATCAATGACATCTATCAGGGGGCACACCACCATTTTCTTCATCAGTCCTTTTaGCTATTACATGAGGTTTTG +
Preference number: 4 (lower is better)
Translates to: ILQSSIINDIYQGAHHHFLHQSF*LLHEVL
Trigger: CAAAACCTCATGTAATAGTCAAAAGGACTGATGAAG...AAAATGGTGGTGTGCCCCCTGATAGATGTCATTGATGATAGAACTCTGGAGTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR TCA 90 bp TTATACTCCAGAGTTCTATCATCAATGACATCTATCAGGGGGCACACCACCATTCTTCATCAGTCCTTTTaGCTATTACATGAGGTTTTG +
Preference number: 4 (lower is better)
Translates to: LYSRVLSSMTSIRGHTTILHQSF*LLHEVL
Trigger: CAAAACCTCATGTAATAGTCAAAAGGACTGATGAAG...AATGGTGGTGTGCCCCCTGATAGATGTCATTGATGATAGAACTCTGGAGTATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR TCA 90 bp TGCATTTCACGTAATTCCACGATGTTCCAAACTTACACTCTTGTGACACTATGTACACTGGACATGGTCTaGAACAAGGCATTACATTCT +
Preference number: 4 (lower is better)
Translates to: CISRNSTMFQTYTLVTLCTLDMV*NKALHS
Trigger: AGAATGTAATGCCTTGTTTCAGACCATGTCCAGTGT...ACATAGTGTCACAAGAGTGTAAGTTTGGAACATCGTGGAATTACGTGAAATGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392800.7
ENST00000414073.6
ENST00000416269.6
ENST00000431418.6
ENST00000616416.4
CDS-3UTR TCA 90 bp AATTGCATTTCACGTAATTCCACGATGTTCCAAACTTACACTCTTGTGACACTAGAGTTCTATCATCAATaGCATCTATCAGGGGGCACA +
Preference number: 4 (lower is better)
Translates to: NCISRNSTMFQTYTLVTLEFYHQ*HLSGGT
Trigger: TGTGCCCCCTGATAGATGTCATTGATGATAGAACTC...TAGTGTCACAAGAGTGTAAGTTTGGAACATCGTGGAATTACGTGAAATGCAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000392800.7
ENST00000414073.6
ENST00000416269.6
ENST00000431418.6
ENST00000616416.4
CDS-3UTR TCA 90 bp TGCATTTCACGTAATTCCACGATGTTCCAAACTTACACTCTTGTGACACTATGTGAATATTTCCGTAGGTaGCATATTTCAGACCAGGCT +
Preference number: 4 (lower is better)
Translates to: CISRNSTMFQTYTLVTLCEYFRR*HISDQA
Trigger: AGCCTGGTCTGAAATATGTCACCTACGGAAATATTC...ACATAGTGTCACAAGAGTGTAAGTTTGGAACATCGTGGAATTACGTGAAATGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392800.7
ENST00000414073.6
ENST00000416269.6
ENST00000431418.6
ENST00000616416.4
CDS-3UTR TCA 90 bp TGCATTTCACGTAATTCCACGATGTTCCAAACTTACACTCTTGTGACACTATGTCAAATACCACTGAAATaGCTTGCAACCCAGTCGTTT +
Preference number: 4 (lower is better)
Translates to: CISRNSTMFQTYTLVTLCQIPLK*LATQSF
Trigger: AAACGACTGGGTTGCAAGTCATTTCAGTGGTATTTG...ACATAGTGTCACAAGAGTGTAAGTTTGGAACATCGTGGAATTACGTGAAATGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392800.7
ENST00000414073.6
ENST00000416269.6
ENST00000431418.6
ENST00000616416.4
CDS-3UTR TCA 90 bp AATTGCATTTCACGTAATTCCACGATGTTCCAAACTTACACTCTTGTGACACTAGATGTAAGAGGTGTGTaGTTGGCCTTTGGACTTTGT +
Preference number: 4 (lower is better)
Translates to: NCISRNSTMFQTYTLVTLDVRGV*LAFGLC
Trigger: ACAAAGTCCAAAGGCCAATCACACACCTCTTACATC...TAGTGTCACAAGAGTGTAAGTTTGGAACATCGTGGAATTACGTGAAATGCAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000414073.6
ENST00000416269.6
ENST00000431418.6
ENST00000616416.4
CDS-3UTR GCA 90 bp TGCATTTCACGTAATTCCACGATGTTCCAAACTTACACTCTTGTGACACTATGTTTTTCTTCTGCCAGCTaGTCACATGATTATGGTGCA +
Preference number: 4 (lower is better)
Translates to: CISRNSTMFQTYTLVTLCFSSAS*SHDYGA
Trigger: TGCACCATAATCATGTGAGCAGCTGGCAGAAGAAAA...ACATAGTGTCACAAGAGTGTAAGTTTGGAACATCGTGGAATTACGTGAAATGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000392800.7
ENST00000414073.6
ENST00000416269.6
ENST00000431418.6
ENST00000616416.4
CDS-3UTR GCA 90 bp TGCATTTCACGTAATTCCACGATGTTCCAAACTTACACTCTTGTGACACTATGTACCACTGAAATGACTTaGAACCCAGTCGTTTCCTTA +
Preference number: 4 (lower is better)
Translates to: CISRNSTMFQTYTLVTLCTTEMT*NPVVSL
Trigger: TAAGGAAACGACTGGGTTGCAAGTCATTTCAGTGGT...ACATAGTGTCACAAGAGTGTAAGTTTGGAACATCGTGGAATTACGTGAAATGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392800.7
ENST00000414073.6
ENST00000416269.6
ENST00000431418.6
ENST00000616416.4
CDS-3UTR GCA 90 bp TACAAGAGGAGAGGGCTTATACTCCAGAGTTCTATCATCAATGACATCTATCAGAACCATCCATCTAAATaGCTTGGATGTTGTGTCATC +
Preference number: 4 (lower is better)
Translates to: YKRRGLILQSSIINDIYQNHPSK*LGCCVI
Trigger: GATGACACAACATCCAAGGCATTTAGATGGATGGTT...CTGATAGATGTCATTGATGATAGAACTCTGGAGTATAAGCCCTCTCCTCTTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414073.6
ENST00000416269.6
ENST00000426341.6
CDS-3UTR GCA 90 bp AGTTGGCCTCCACACATCCAGATCCTTAGTGAAAGTTCCAAATTTTCTCTTCCCATCATCTCATTTTCCTaGATTAAGCCCTTAATAGCT +
Preference number: 4 (lower is better)
Translates to: SWPPHIQILSESSKFSLPIISFS*IKPLIA
Trigger: AGCTATTAAGGGCTTAATGCAGGAAAATGAGATGAT...GGGAAGAGAAAATTTGGAACTTTCACTAAGGATCTGGATGTGTGGAGGCCAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414073.6
ENST00000416269.6
CDS-3UTR CCA 90 bp AGTTGGCCTCCACACATCCAGATCCTTAGTGAAAGTTCCAAATTTTCTCTTCCCAGTTCTGGGTTTGTATaGTTAAAATCTGTACCTAAC +
Preference number: 4 (lower is better)
Translates to: SWPPHIQILSESSKFSLPSSGFV*LKSVPN
Trigger: GTTAGGTACAGATTTTAACCATACAAACCCAGAACT...GGGAAGAGAAAATTTGGAACTTTCACTAAGGATCTGGATGTGTGGAGGCCAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR CCA 90 bp TCCCCTTACAAGAGGAGAGGGCTTATACTCCAGAGTTCTATCATCAATGACATCAGTTCTGGGTTTGTATaGTTAAAATCTGTACCTAAC +
Preference number: 4 (lower is better)
Translates to: SPYKRRGLILQSSIINDISSGFV*LKSVPN
Trigger: GTTAGGTACAGATTTTAACCATACAAACCCAGAACT...GATGTCATTGATGATAGAACTCTGGAGTATAAGCCCTCTCCTCTTGTAAGGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR CCA 90 bp TGCATTTCACGTAATTCCACGATGTTCCAAACTTACACTCTTGTGACACTATGTTTCAAGAAAATAGTGTaGCGTGAGGTTCGTGACACT +
Preference number: 4 (lower is better)
Translates to: CISRNSTMFQTYTLVTLCFKKIV*REVRDT
Trigger: AGTGTCACGAACCTCACGCCACACTATTTTCTTGAA...ACATAGTGTCACAAGAGTGTAAGTTTGGAACATCGTGGAATTACGTGAAATGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392800.7
ENST00000414073.6
ENST00000416269.6
ENST00000431418.6
ENST00000616416.4
CDS-3UTR TCA 90 bp TTTAATTGCATTTCACGTAATTCCACGATGTTCCAAACTTACACTCTTGTGACAGGGGTCTGTGCCGAATaGACTGAGAGATGTAAAATT +
Preference number: 4 (lower is better)
Translates to: FNCISRNSTMFQTYTLVTGVCAE*TERCKI
Trigger: AATTTTACATCTCTCAGTTCATTCGGCACAGACCCC...TGTCACAAGAGTGTAAGTTTGGAACATCGTGGAATTACGTGAAATGCAATTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392800.7
ENST00000414073.6
ENST00000416269.6
ENST00000616416.4
CDS-3UTR TCA 90 bp AGGTTTTCCAGTTTGTTTCTTACTGATATGTCCTACTCGAGAGCAGGGGATTATCTTCATCAGTCCTTTTaGCTATTACATGAGGTTTTG +
Preference number: 4 (lower is better)
Translates to: RFSSLFLTDMSYSRAGDYLHQSF*LLHEVL
Trigger: CAAAACCTCATGTAATAGTCAAAAGGACTGATGAAG...ATAATCCCCTGCTCTCGAGTAGGACATATCAGTAAGAAACAAACTGGAAAACCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR TCA 90 bp AATTGCATTTCACGTAATTCCACGATGTTCCAAACTTACACTCTTGTGACACTAACACTGGACATGGTCTaGAACAAGGCATTACATTCT +
Preference number: 4 (lower is better)
Translates to: NCISRNSTMFQTYTLVTLTLDMV*NKALHS
Trigger: AGAATGTAATGCCTTGTTTCAGACCATGTCCAGTGT...TAGTGTCACAAGAGTGTAAGTTTGGAACATCGTGGAATTACGTGAAATGCAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392800.7
ENST00000414073.6
ENST00000416269.6
ENST00000431418.6
ENST00000616416.4
CDS-3UTR TCA 90 bp TTTAATTGCATTTCACGTAATTCCACGATGTTCCAAACTTACACTCTTGTGACAGAGTTCTATCATCAATaGCATCTATCAGGGGGCACA +
Preference number: 4 (lower is better)
Translates to: FNCISRNSTMFQTYTLVTEFYHQ*HLSGGT
Trigger: TGTGCCCCCTGATAGATGTCATTGATGATAGAACTC...TGTCACAAGAGTGTAAGTTTGGAACATCGTGGAATTACGTGAAATGCAATTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000392800.7
ENST00000414073.6
ENST00000416269.6
ENST00000431418.6
ENST00000616416.4
CDS-3UTR TCA 90 bp AATTGCATTTCACGTAATTCCACGATGTTCCAAACTTACACTCTTGTGACACTACAGTTTGTTTCTTACTaGTATGTCCTACTCGAGAGC +
Preference number: 4 (lower is better)
Translates to: NCISRNSTMFQTYTLVTLQFVSY*YVLLES
Trigger: GCTCTCGAGTAGGACATATCAGTAAGAAACAAACTG...TAGTGTCACAAGAGTGTAAGTTTGGAACATCGTGGAATTACGTGAAATGCAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392800.7
ENST00000414073.6
ENST00000416269.6
ENST00000431418.6
ENST00000616416.4
CDS-3UTR TCA 90 bp AATTGCATTTCACGTAATTCCACGATGTTCCAAACTTACACTCTTGTGACACTAGAATATTTCCGTAGGTaGCATATTTCAGACCAGGCT +
Preference number: 4 (lower is better)
Translates to: NCISRNSTMFQTYTLVTLEYFRR*HISDQA
Trigger: AGCCTGGTCTGAAATATGTCACCTACGGAAATATTC...TAGTGTCACAAGAGTGTAAGTTTGGAACATCGTGGAATTACGTGAAATGCAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392800.7
ENST00000414073.6
ENST00000416269.6
ENST00000431418.6
ENST00000616416.4
CDS-3UTR TCA 90 bp AATTGCATTTCACGTAATTCCACGATGTTCCAAACTTACACTCTTGTGACACTACAAATACCACTGAAATaGCTTGCAACCCAGTCGTTT +
Preference number: 4 (lower is better)
Translates to: NCISRNSTMFQTYTLVTLQIPLK*LATQSF
Trigger: AAACGACTGGGTTGCAAGTCATTTCAGTGGTATTTG...TAGTGTCACAAGAGTGTAAGTTTGGAACATCGTGGAATTACGTGAAATGCAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392800.7
ENST00000414073.6
ENST00000416269.6
ENST00000431418.6
ENST00000616416.4
CDS-3UTR CCA 90 bp TTTAATTGCATTTCACGTAATTCCACGATGTTCCAAACTTACACTCTTGTGACATTTACTCCTGGTATCTaGCACTTCTCTTTCGATGCC +
Preference number: 4 (lower is better)
Translates to: FNCISRNSTMFQTYTLVTFTPGI*HFSFDA
Trigger: GGCATCGAAAGAGAAGTGCCAGATACCAGGAGTAAA...TGTCACAAGAGTGTAAGTTTGGAACATCGTGGAATTACGTGAAATGCAATTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392800.7
ENST00000414073.6
ENST00000416269.6
ENST00000431418.6
ENST00000616416.4
CDS-3UTR CCA 90 bp AATTGCATTTCACGTAATTCCACGATGTTCCAAACTTACACTCTTGTGACACTATTCAAGAAAATAGTGTaGCGTGAGGTTCGTGACACT +
Preference number: 4 (lower is better)
Translates to: NCISRNSTMFQTYTLVTLFKKIV*REVRDT
Trigger: AGTGTCACGAACCTCACGCCACACTATTTTCTTGAA...TAGTGTCACAAGAGTGTAAGTTTGGAACATCGTGGAATTACGTGAAATGCAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392800.7
ENST00000414073.6
ENST00000416269.6
ENST00000431418.6
ENST00000616416.4
CDS-3UTR CCA 90 bp TGCATTTCACGTAATTCCACGATGTTCCAAACTTACACTCTTGTGACACTATGTAGATGCCTCCAACTCTaGGAAGACATTATCCAAATA +
Preference number: 4 (lower is better)
Translates to: CISRNSTMFQTYTLVTLCRCLQL*EDIIQI
Trigger: TATTTGGATAATGTCTTCCCAGAGTTGGAGGCATCT...ACATAGTGTCACAAGAGTGTAAGTTTGGAACATCGTGGAATTACGTGAAATGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392800.7
ENST00000414073.6
ENST00000416269.6
ENST00000431418.6
ENST00000616416.4
CDS-3UTR CCA 90 bp AATTGCATTTCACGTAATTCCACGATGTTCCAAACTTACACTCTTGTGACACTATGTGTGATTGGCCTTTaGACTTTGTGTCTTCAGAAG +
Preference number: 4 (lower is better)
Translates to: NCISRNSTMFQTYTLVTLCVIGL*TLCLQK
Trigger: CTTCTGAAGACACAAAGTCCAAAGGCCAATCACACA...TAGTGTCACAAGAGTGTAAGTTTGGAACATCGTGGAATTACGTGAAATGCAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000414073.6
ENST00000416269.6
ENST00000431418.6
ENST00000616416.4
CDS-3UTR TCA 90 bp TGCATTTCACGTAATTCCACGATGTTCCAAACTTACACTCTTGTGACACTATGTTATGGTGCAAATATATaGATAACAGAGCTGTCCAGA +
Preference number: 4 (lower is better)
Translates to: CISRNSTMFQTYTLVTLCYGANI*ITELSR
Trigger: TCTGGACAGCTCTGTTATTCATATATTTGCACCATA...ACATAGTGTCACAAGAGTGTAAGTTTGGAACATCGTGGAATTACGTGAAATGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392800.7
ENST00000414073.6
ENST00000416269.6
ENST00000431418.6
ENST00000616416.4
CDS-3UTR TCA 90 bp TTTAATTGCATTTCACGTAATTCCACGATGTTCCAAACTTACACTCTTGTGACATGCCAGCTGCTCACATaGTTATGGTGCAAATATATG +
Preference number: 4 (lower is better)
Translates to: FNCISRNSTMFQTYTLVTCQLLT*LWCKYM
Trigger: CATATATTTGCACCATAATCATGTGAGCAGCTGGCA...TGTCACAAGAGTGTAAGTTTGGAACATCGTGGAATTACGTGAAATGCAATTAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392800.7
ENST00000414073.6
ENST00000416269.6
ENST00000431418.6
ENST00000616416.4
CDS-3UTR TCA 90 bp TGCATTTCACGTAATTCCACGATGTTCCAAACTTACACTCTTGTGACACTATGTCTTCATCAGTCCTTTTaGCTATTACATGAGGTTTTG +
Preference number: 4 (lower is better)
Translates to: CISRNSTMFQTYTLVTLCLHQSF*LLHEVL
Trigger: CAAAACCTCATGTAATAGTCAAAAGGACTGATGAAG...ACATAGTGTCACAAGAGTGTAAGTTTGGAACATCGTGGAATTACGTGAAATGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000392800.7
ENST00000414073.6
ENST00000416269.6
ENST00000431418.6
ENST00000616416.4
CDS-3UTR TCA 90 bp TTTAATTGCATTTCACGTAATTCCACGATGTTCCAAACTTACACTCTTGTGACAACACTGGACATGGTCTaGAACAAGGCATTACATTCT +
Preference number: 4 (lower is better)
Translates to: FNCISRNSTMFQTYTLVTTLDMV*NKALHS
Trigger: AGAATGTAATGCCTTGTTTCAGACCATGTCCAGTGT...TGTCACAAGAGTGTAAGTTTGGAACATCGTGGAATTACGTGAAATGCAATTAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392800.7
ENST00000414073.6
ENST00000416269.6
ENST00000431418.6
ENST00000616416.4
CDS-3UTR TCA 90 bp TTTAATTGCATTTCACGTAATTCCACGATGTTCCAAACTTACACTCTTGTGACACAGTTTGTTTCTTACTaGTATGTCCTACTCGAGAGC +
Preference number: 4 (lower is better)
Translates to: FNCISRNSTMFQTYTLVTQFVSY*YVLLES
Trigger: GCTCTCGAGTAGGACATATCAGTAAGAAACAAACTG...TGTCACAAGAGTGTAAGTTTGGAACATCGTGGAATTACGTGAAATGCAATTAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392800.7
ENST00000414073.6
ENST00000416269.6
ENST00000431418.6
ENST00000616416.4
CDS-3UTR TCA 90 bp TTTAATTGCATTTCACGTAATTCCACGATGTTCCAAACTTACACTCTTGTGACAGAATATTTCCGTAGGTaGCATATTTCAGACCAGGCT +
Preference number: 4 (lower is better)
Translates to: FNCISRNSTMFQTYTLVTEYFRR*HISDQA
Trigger: AGCCTGGTCTGAAATATGTCACCTACGGAAATATTC...TGTCACAAGAGTGTAAGTTTGGAACATCGTGGAATTACGTGAAATGCAATTAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392800.7
ENST00000414073.6
ENST00000416269.6
ENST00000431418.6
ENST00000616416.4
CDS-3UTR TCA 90 bp TGCATTTCACGTAATTCCACGATGTTCCAAACTTACACTCTTGTGACACTATGTCTTGTGACACTATGTTaGATGACTAGGAGACTTTTA +
Preference number: 4 (lower is better)
Translates to: CISRNSTMFQTYTLVTLCLVTLC*MTRRLL
Trigger: TAAAAGTCTCCTAGTCATTCAACATAGTGTCACAAG...ACATAGTGTCACAAGAGTGTAAGTTTGGAACATCGTGGAATTACGTGAAATGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392800.7
ENST00000414073.6
ENST00000416269.6
ENST00000431418.6
ENST00000616416.4
CDS-3UTR TCA 90 bp TTTAATTGCATTTCACGTAATTCCACGATGTTCCAAACTTACACTCTTGTGACACAGAATTCAATGCCTTaGGATAATTGCATTGGCTGC +
Preference number: 4 (lower is better)
Translates to: FNCISRNSTMFQTYTLVTQNSMP*DNCIGC
Trigger: GCAGCCAATGCAATTATCTCAAGGCATTGAATTCTG...TGTCACAAGAGTGTAAGTTTGGAACATCGTGGAATTACGTGAAATGCAATTAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414073.6
ENST00000416269.6
ENST00000616416.4
CDS-3UTR GCA 90 bp TTTAATTGCATTTCACGTAATTCCACGATGTTCCAAACTTACACTCTTGTGACAACCACTGAAATGACTTaGAACCCAGTCGTTTCCTTA +
Preference number: 4 (lower is better)
Translates to: FNCISRNSTMFQTYTLVTTTEMT*NPVVSL
Trigger: TAAGGAAACGACTGGGTTGCAAGTCATTTCAGTGGT...TGTCACAAGAGTGTAAGTTTGGAACATCGTGGAATTACGTGAAATGCAATTAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392800.7
ENST00000414073.6
ENST00000416269.6
ENST00000431418.6
ENST00000616416.4
CDS-3UTR CCA 90 bp AATTGCATTTCACGTAATTCCACGATGTTCCAAACTTACACTCTTGTGACACTAAGATGCCTCCAACTCTaGGAAGACATTATCCAAATA +
Preference number: 4 (lower is better)
Translates to: NCISRNSTMFQTYTLVTLRCLQL*EDIIQI
Trigger: TATTTGGATAATGTCTTCCCAGAGTTGGAGGCATCT...TAGTGTCACAAGAGTGTAAGTTTGGAACATCGTGGAATTACGTGAAATGCAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392800.7
ENST00000414073.6
ENST00000416269.6
ENST00000431418.6
ENST00000616416.4
CDS-3UTR CCA 90 bp TTTAATTGCATTTCACGTAATTCCACGATGTTCCAAACTTACACTCTTGTGACATGTGTGATTGGCCTTTaGACTTTGTGTCTTCAGAAG +
Preference number: 4 (lower is better)
Translates to: FNCISRNSTMFQTYTLVTCVIGL*TLCLQK
Trigger: CTTCTGAAGACACAAAGTCCAAAGGCCAATCACACA...TGTCACAAGAGTGTAAGTTTGGAACATCGTGGAATTACGTGAAATGCAATTAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000414073.6
ENST00000416269.6
ENST00000431418.6
ENST00000616416.4
CDS-3UTR TCA 90 bp AATTGCATTTCACGTAATTCCACGATGTTCCAAACTTACACTCTTGTGACACTATTTTTCAATTTCCCTTaGGATAATTGCATTGGCTGC +
Preference number: 4 (lower is better)
Translates to: NCISRNSTMFQTYTLVTLFFNFP*DNCIGC
Trigger: GCAGCCAATGCAATTATCTCAAGGGAAATTGAAAAA...TAGTGTCACAAGAGTGTAAGTTTGGAACATCGTGGAATTACGTGAAATGCAATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392800.7
CDS-3UTR TCA 90 bp AATTGCATTTCACGTAATTCCACGATGTTCCAAACTTACACTCTTGTGACACTATATGGTGCAAATATATaGATAACAGAGCTGTCCAGA +
Preference number: 4 (lower is better)
Translates to: NCISRNSTMFQTYTLVTLYGANI*ITELSR
Trigger: TCTGGACAGCTCTGTTATTCATATATTTGCACCATA...TAGTGTCACAAGAGTGTAAGTTTGGAACATCGTGGAATTACGTGAAATGCAATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392800.7
ENST00000414073.6
ENST00000416269.6
ENST00000431418.6
ENST00000616416.4
CDS-3UTR TCA 90 bp AATTGCATTTCACGTAATTCCACGATGTTCCAAACTTACACTCTTGTGACACTATTTTGGTATTTGCTCTaGGCCATAGATAATTTGCTG +
Preference number: 4 (lower is better)
Translates to: NCISRNSTMFQTYTLVTLFWYLL*AIDNLL
Trigger: CAGCAAATTATCTATGGCTCAGAGCAAATACCAAAA...TAGTGTCACAAGAGTGTAAGTTTGGAACATCGTGGAATTACGTGAAATGCAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392800.7
ENST00000414073.6
ENST00000416269.6
ENST00000431418.6
ENST00000616416.4
CDS-3UTR TCA 90 bp AATTGCATTTCACGTAATTCCACGATGTTCCAAACTTACACTCTTGTGACACTACTTCATCAGTCCTTTTaGCTATTACATGAGGTTTTG +
Preference number: 4 (lower is better)
Translates to: NCISRNSTMFQTYTLVTLLHQSF*LLHEVL
Trigger: CAAAACCTCATGTAATAGTCAAAAGGACTGATGAAG...TAGTGTCACAAGAGTGTAAGTTTGGAACATCGTGGAATTACGTGAAATGCAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000392800.7
ENST00000414073.6
ENST00000416269.6
ENST00000431418.6
ENST00000616416.4
CDS-3UTR TCA 90 bp AATTGCATTTCACGTAATTCCACGATGTTCCAAACTTACACTCTTGTGACACTACTTGTGACACTATGTTaGATGACTAGGAGACTTTTA +
Preference number: 4 (lower is better)
Translates to: NCISRNSTMFQTYTLVTLLVTLC*MTRRLL
Trigger: TAAAAGTCTCCTAGTCATTCAACATAGTGTCACAAG...TAGTGTCACAAGAGTGTAAGTTTGGAACATCGTGGAATTACGTGAAATGCAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392800.7
ENST00000414073.6
ENST00000416269.6
ENST00000431418.6
ENST00000616416.4
CDS-3UTR GCA 90 bp TGCATTTCACGTAATTCCACGATGTTCCAAACTTACACTCTTGTGACACTATGTTTCTTCACTAAAAGATaGAGAATTCAATGCTGGTTG +
Preference number: 4 (lower is better)
Translates to: CISRNSTMFQTYTLVTLCFFTKR*RIQCWL
Trigger: CAACCAGCATTGAATTCTGCATCTTTTAGTGAAGAA...ACATAGTGTCACAAGAGTGTAAGTTTGGAACATCGTGGAATTACGTGAAATGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431418.6
CDS-3UTR CCA 90 bp TGCATTTCACGTAATTCCACGATGTTCCAAACTTACACTCTTGTGACACTATGTAGTTCTGGGTTTGTATaGTTAAAATCTGTACCTAAC +
Preference number: 4 (lower is better)
Translates to: CISRNSTMFQTYTLVTLCSSGFV*LKSVPN
Trigger: GTTAGGTACAGATTTTAACCATACAAACCCAGAACT...ACATAGTGTCACAAGAGTGTAAGTTTGGAACATCGTGGAATTACGTGAAATGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392800.7
ENST00000414073.6
ENST00000416269.6
ENST00000431418.6
ENST00000616416.4
CDS-3UTR TCA 90 bp TTTAATTGCATTTCACGTAATTCCACGATGTTCCAAACTTACACTCTTGTGACATATGGTGCAAATATATaGATAACAGAGCTGTCCAGA +
Preference number: 4 (lower is better)
Translates to: FNCISRNSTMFQTYTLVTYGANI*ITELSR
Trigger: TCTGGACAGCTCTGTTATTCATATATTTGCACCATA...TGTCACAAGAGTGTAAGTTTGGAACATCGTGGAATTACGTGAAATGCAATTAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392800.7
ENST00000414073.6
ENST00000416269.6
ENST00000431418.6
ENST00000616416.4
CDS-3UTR TCA 90 bp TTTAATTGCATTTCACGTAATTCCACGATGTTCCAAACTTACACTCTTGTGACATTTTGGTATTTGCTCTaGGCCATAGATAATTTGCTG +
Preference number: 4 (lower is better)
Translates to: FNCISRNSTMFQTYTLVTFWYLL*AIDNLL
Trigger: CAGCAAATTATCTATGGCTCAGAGCAAATACCAAAA...TGTCACAAGAGTGTAAGTTTGGAACATCGTGGAATTACGTGAAATGCAATTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392800.7
ENST00000414073.6
ENST00000416269.6
ENST00000431418.6
ENST00000616416.4
CDS-3UTR TCA 90 bp TTTAATTGCATTTCACGTAATTCCACGATGTTCCAAACTTACACTCTTGTGACACTTGTGACACTATGTTaGATGACTAGGAGACTTTTA +
Preference number: 4 (lower is better)
Translates to: FNCISRNSTMFQTYTLVTLVTLC*MTRRLL
Trigger: TAAAAGTCTCCTAGTCATTCAACATAGTGTCACAAG...TGTCACAAGAGTGTAAGTTTGGAACATCGTGGAATTACGTGAAATGCAATTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392800.7
ENST00000414073.6
ENST00000416269.6
ENST00000431418.6
ENST00000616416.4
CDS GCA 90 bp GGGGTTATCCATCTGCCTGCATCTCAGGCGGTTTCCTTCATGCCCTaGAGGTACGGCACAGCATTCACCGCAGGCTGCCCACCTCAGCTC +
Preference number: 5 (lower is better)
Translates to: GVIHLPASQAVSFMP*RYGTAFTAGCPPQL
Trigger: GAGCTGAGGTGGGCAGCCTGCGGTGAATGCTGTGCCGTACCTGCAGGGCATGAAGGAAACCGCCTGAGATGCAGGCAGATGGATAACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483959.1
CDS GCA 90 bp TCTGCGGGGTTATCCATCTGCCTGCATCTCAGGCGGTTTCCTTCATaGCCTGCAGGTACGGCACAGCATTCACCGCAGGCTGCCCACCTC +
Preference number: 5 (lower is better)
Translates to: SAGLSICLHLRRFPS*PAGTAQHSPQAAHL
Trigger: GAGGTGGGCAGCCTGCGGTGAATGCTGTGCCGTACCTGCAGGGCATGAAGGAAACCGCCTGAGATGCAGGCAGATGGATAACCCCGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483959.1
CDS CCA 90 bp CCCTCCAGGCGGCTGGCCCTGAGCATCCCATTGCTGGTGGAAAGGTaGTGTTCTGAAAGCCCCTGGCATACTGTGGCTGATATGTGCTTG +
Preference number: 5 (lower is better)
Translates to: PSRRLALSIPLLVER*CSESPWHTVADMCL
Trigger: CAAGCACATATCAGCCACAGTATGCCAGGGGCTTTCAGAACACCACCTTTCCACCAGCAATGGGATGCTCAGGGCCAGCCGCCTGGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482845.2
CDS CCA 90 bp GCAGGCTTTATGGTGGCTGGGTTCCAAGCAGATACCTGGTTGTGCTaGGTTGCGGGGCCACACAGTAGTACTCAAAGGGCAGTACAGTCC +
Preference number: 5 (lower is better)
Translates to: AGFMVAGFQADTWLC*VAGPHSSTQRAVQS
Trigger: GGACTGTACTGCCCTTTGAGTACTACTGTGTGGCCCCGCAACCCAGCACAACCAGGTATCTGCTTGGAACCCAGCCACCATAAAGCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416062.5
CDS-3UTR CAA 90 bp CCAGGAACACCAGAACATCCCCTGAAGCATGAGAAGCTCCAATCAGCCTTGCTCCCTGGTTGTGCTGGGTaGCGGGGCCACACAGTAGTA +
Preference number: 5 (lower is better)
Translates to: PGTPEHPLKHEKLQSALLPGCAG*RGHTVV
Trigger: TACTACTGTGTGGCCCCGCAACCCAGCACAACCAGG...GAGCAAGGCTGATTGGAGCTTCTCATGCTTCAGGGGATGTTCTGGTGTTCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426341.6
CDS GCA 90 bp CTAGCAGGCTTTATGGTGGCTGGGTTCCAAGCAGATACCTGGTTGTaGTGGGTTGCGGGGCCACACAGTAGTACTCAAAGGGCAGTACAG +
Preference number: 5 (lower is better)
Translates to: LAGFMVAGFQADTWL*WVAGPHSSTQRAVQ
Trigger: CTGTACTGCCCTTTGAGTACTACTGTGTGGCCCCGCAACCCAGCACAACCAGGTATCTGCTTGGAACCCAGCCACCATAAAGCCTGCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416062.5
CDS-3UTR CAA 90 bp GATCTCCAGACACCTCACTCACATCCAGGATGTAGGAGGCAGCAAGAGGAGGGATGGGTCAGGGGCAGGTaGAACAGGAACAGGTTCATG +
Preference number: 5 (lower is better)
Translates to: DLQTPHSHPGCRRQQEEGWVRGR*NRNRFM
Trigger: CATGAACCTGTTCCTGTTCAACCTGCCCCTGACCCA...TCCCTCCTCTTGCTGCCTCCTACATCCTGGATGTGAGTGAGGTGTCTGGAGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416269.6
CDS-3UTR CAA 90 bp GCAAATGACAATGCTGGCAGTCGGGAGGCGGGCTGGGTAATGTTTTTGAAGACAAAGCTCCAATCAGCCTaGCTCGAATCAGCCCCTCTC +
Preference number: 5 (lower is better)
Translates to: ANDNAGSREAGWVMFLKTKLQSA*LESAPL
Trigger: GAGAGGGGCTGATTCGAGCAAGGCTGATTGGAGCTT...TGTCTTCAAAAACATTACCCAGCCCGCCTCCCGACTGCCAGCATTGTCATTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414073.6
ENST00000416269.6
ENST00000426341.6
CDS-3UTR CAA 90 bp GTGTGGCGTGAGGTTCGTGACACTGGACATGGTCTGAAACAAGGCATTACATTCGGGCACACCACCATTTaGGGGTCCTTGGCAATGGCA +
Preference number: 5 (lower is better)
Translates to: VWREVRDTGHGLKQGITFGHTTI*GSLAMA
Trigger: TGCCATTGCCAAGGACCCCAAAATGGTGGTGTGCCC...GAATGTAATGCCTTGTTTCAGACCATGTCCAGTGTCACGAACCTCACGCCACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414073.6
ENST00000416269.6
ENST00000426341.6
CDS-3UTR CAA 90 bp TTTGGGGTCCTTGGCAATGGCATGCAGCAGGGGCTCCAGCCATACTCTGTTCACAAATTCCTCCAGACATaGCAGGTGACCGGATTGGTT +
Preference number: 5 (lower is better)
Translates to: FGVLGNGMQQGLQPYSVHKFLQT*QVTGLV
Trigger: AACCAATCCGGTCACCTGCAATGTCTGGAGGAATTT...GTGAACAGAGTATGGCTGGAGCCCCTGCTGCATGCCATTGCCAAGGACCCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR CAA 90 bp TCCAGAGTTCTATCATCAATGACATCTATCAGGGGGCACACCACCATTTTGGGGCAAGCAGATACCTGGTaGTGCTGGGTTGCGGGGCCA +
Preference number: 5 (lower is better)
Translates to: SRVLSSMTSIRGHTTILGQADTW*CWVAGP
Trigger: TGGCCCCGCAACCCAGCACAACCAGGTATCTGCTTG...CCCCAAAATGGTGGTGTGCCCCCTGATAGATGTCATTGATGATAGAACTCTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR CAA 90 bp CTTACTGATATGTCCTACTCGAGAGCAGGGGATTATAAAGAGTTGGCCTCCACACCTGGTTGTGCTGGGTaGCGGGGCCACACAGTAGTA +
Preference number: 5 (lower is better)
Translates to: LTDMSYSRAGDYKELASTPGCAG*RGHTVV
Trigger: TACTACTGTGTGGCCCCGCAACCCAGCACAACCAGG...TGTGGAGGCCAACTCTTTATAATCCCCTGCTCTCGAGTAGGACATATCAGTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416062.5
ENST00000426341.6
ENST00000448366.6
CDS-3UTR CAA 90 bp AGAGGAGAGGGCTTATACTCCAGAGTTCTATCATCAATGACATCTATCAGGGGGCAAGCAGATACCTGGTaGTGCTGGGTTGCGGGGCCA +
Preference number: 5 (lower is better)
Translates to: RGEGLYSRVLSSMTSIRGQADTW*CWVAGP
Trigger: TGGCCCCGCAACCCAGCACAACCAGGTATCTGCTTG...CCCCCTGATAGATGTCATTGATGATAGAACTCTGGAGTATAAGCCCTCTCCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS TCA 90 bp AGTCTCTTCTGGAAGCTGCACTGCCATCTAGGCTCTTCCTCTGATTaGACCTACTTGTGTCCCTGCCTTGCAGTGTTTGTCCCCAGATCT +
Preference number: 5 (lower is better)
Translates to: SLFWKLHCHLGSSSD*TYLCPCLAVFVPRS
Trigger: AGATCTGGGGACAAACACTGCAAGGCAGGGACACAAGTAGGTTCAATCAGAGGAAGAGCCTAGATGGCAGTGCAGCTTCCAGAAGAGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482845.2
CDS-3UTR CAA 90 bp GGGCTTATACTCCAGAGTTCTATCATCAATGACATCTATCAGGGGGCACACCACAAGCTCCAATCAGCCTaGCTCGAATCAGCCCCTCTC +
Preference number: 5 (lower is better)
Translates to: GLILQSSIINDIYQGAHHKLQSA*LESAPL
Trigger: GAGAGGGGCTGATTCGAGCAAGGCTGATTGGAGCTT...GTGGTGTGCCCCCTGATAGATGTCATTGATGATAGAACTCTGGAGTATAAGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414073.6
ENST00000416269.6
ENST00000426341.6
CDS-3UTR CAA 90 bp AGAGGAGAGGGCTTATACTCCAGAGTTCTATCATCAATGACATCTATCAGGGGGGGGCACACCACCATTTaGGGGTCCTTGGCAATGGCA +
Preference number: 5 (lower is better)
Translates to: RGEGLYSRVLSSMTSIRGGHTTI*GSLAMA
Trigger: TGCCATTGCCAAGGACCCCAAAATGGTGGTGTGCCC...CCCCCTGATAGATGTCATTGATGATAGAACTCTGGAGTATAAGCCCTCTCCTCT
51% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR CAA 90 bp TGGGACGCCATGAGCCAGGCCTTAACTGCAGTTGGTCTGATTCCGCTTCTTTCAGGGGATTATAAAGAGTaGGCCTCCACACATCCAGAT +
Preference number: 5 (lower is better)
Translates to: WDAMSQALTAVGLIPLLSGDYKE*ASTHPD
Trigger: ATCTGGATGTGTGGAGGCCAACTCTTTATAATCCCC...TGAAAGAAGCGGAATCAGACCAACTGCAGTTAAGGCCTGGCTCATGGCGTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416269.6
CDS-3UTR CAA 90 bp CCCCTTACAAGAGGAGAGGGCTTATACTCCAGAGTTCTATCATCAATGACATCTCCTGGTTGTGCTGGGTaGCGGGGCCACACAGTAGTA +
Preference number: 5 (lower is better)
Translates to: PLTRGEGLYSRVLSSMTSPGCAG*RGHTVV
Trigger: TACTACTGTGTGGCCCCGCAACCCAGCACAACCAGG...AGATGTCATTGATGATAGAACTCTGGAGTATAAGCCCTCTCCTCTTGTAAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416062.5
ENST00000426341.6
ENST00000448366.6
CDS-3UTR CAA 90 bp AAGAGGAGAGGGCTTATACTCCAGAGTTCTATCATCAATGACATCTATCAGGGGAAGCTCCAATCAGCCTaGCTCGAATCAGCCCCTCTC +
Preference number: 5 (lower is better)
Translates to: KRRGLILQSSIINDIYQGKLQSA*LESAPL
Trigger: GAGAGGGGCTGATTCGAGCAAGGCTGATTGGAGCTT...CCCCTGATAGATGTCATTGATGATAGAACTCTGGAGTATAAGCCCTCTCCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414073.6
ENST00000416269.6
ENST00000426341.6
CDS-3UTR CAA 90 bp GTGTGGCGTGAGGTTCGTGACACTGGACATGGTCTGAAACAAGGCATTACATTCAAATTCCTCCAGACATaGCAGGTGACCGGATTGGTT +
Preference number: 5 (lower is better)
Translates to: VWREVRDTGHGLKQGITFKFLQT*QVTGLV
Trigger: AACCAATCCGGTCACCTGCAATGTCTGGAGGAATTT...GAATGTAATGCCTTGTTTCAGACCATGTCCAGTGTCACGAACCTCACGCCACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414073.6
ENST00000416269.6
ENST00000426341.6
CDS-3UTR CAA 90 bp GCAAATGACAATGCTGGCAGTCGGGAGGCGGGCTGGGTAATGTTTTTGAAGACAGTGTGTGATTGGCCTTaGGACTTTGTGTCTTCAGAA +
Preference number: 5 (lower is better)
Translates to: ANDNAGSREAGWVMFLKTVCDWP*DFVSSE
Trigger: TTCTGAAGACACAAAGTCCAAAGGCCAATCACACAC...TGTCTTCAAAAACATTACCCAGCCCGCCTCCCGACTGCCAGCATTGTCATTTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414073.6
ENST00000416269.6
ENST00000426341.6
CDS-3UTR CAA 90 bp TACAAGAGGAGAGGGCTTATACTCCAGAGTTCTATCATCAATGACATCTATCAGGGGCACACCACCATTTaGGGGTCCTTGGCAATGGCA +
Preference number: 5 (lower is better)
Translates to: YKRRGLILQSSIINDIYQGHTTI*GSLAMA
Trigger: TGCCATTGCCAAGGACCCCAAAATGGTGGTGTGCCC...CTGATAGATGTCATTGATGATAGAACTCTGGAGTATAAGCCCTCTCCTCTTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR CAA 90 bp AGGTTTTCCAGTTTGTTTCTTACTGATATGTCCTACTCGAGAGCAGGGGATTATGGGCACACCACCATTTaGGGGTCCTTGGCAATGGCA +
Preference number: 5 (lower is better)
Translates to: RFSSLFLTDMSYSRAGDYGHTTI*GSLAMA
Trigger: TGCCATTGCCAAGGACCCCAAAATGGTGGTGTGCCC...ATAATCCCCTGCTCTCGAGTAGGACATATCAGTAAGAAACAAACTGGAAAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR CAA 90 bp GGGCTTATACTCCAGAGTTCTATCATCAATGACATCTATCAGGGGGCACACCACAAATTCCTCCAGACATaGCAGGTGACCGGATTGGTT +
Preference number: 5 (lower is better)
Translates to: GLILQSSIINDIYQGAHHKFLQT*QVTGLV
Trigger: AACCAATCCGGTCACCTGCAATGTCTGGAGGAATTT...GTGGTGTGCCCCCTGATAGATGTCATTGATGATAGAACTCTGGAGTATAAGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR CAA 90 bp CAATCAAAAGTTCCCCTTACAAGAGGAGAGGGCTTATACTCCAGAGTTCTATCATGGGTCAGGGGCAGGTaGAACAGGAACAGGTTCATG +
Preference number: 5 (lower is better)
Translates to: QSKVPLTRGEGLYSRVLSWVRGR*NRNRFM
Trigger: CATGAACCTGTTCCTGTTCAACCTGCCCCTGACCCA...TGATAGAACTCTGGAGTATAAGCCCTCTCCTCTTGTAAGGGGAACTTTTGATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000414073.6
ENST00000416269.6
CDS-3UTR CAA 90 bp TGCATTTCACGTAATTCCACGATGTTCCAAACTTACACTCTTGTGACACTATGTGCTGGTTGTGCTGGGTaGCGGGGCCACACAGTAGTA +
Preference number: 5 (lower is better)
Translates to: CISRNSTMFQTYTLVTLCAGCAG*RGHTVV
Trigger: TACTACTGTGTGGCCCCGCAACCCAGCACAACCAGC...ACATAGTGTCACAAGAGTGTAAGTTTGGAACATCGTGGAATTACGTGAAATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431418.6
CDS-3UTR CAA 90 bp TGCATTTCACGTAATTCCACGATGTTCCAAACTTACACTCTTGTGACACTATGTGGGCACACCACCATTTaGGGGTCCTTGGCAATGGCA +
Preference number: 5 (lower is better)
Translates to: CISRNSTMFQTYTLVTLCGHTTI*GSLAMA
Trigger: TGCCATTGCCAAGGACCCCAAAATGGTGGTGTGCCC...ACATAGTGTCACAAGAGTGTAAGTTTGGAACATCGTGGAATTACGTGAAATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392800.7
ENST00000414073.6
ENST00000416269.6
ENST00000431418.6
ENST00000616416.4
CDS-3UTR CAA 90 bp AGGAGAGGGCTTATACTCCAGAGTTCTATCATCAATGACATCTATCAGGGGGCAGGGGATTATAAAGAGTaGGCCTCCACACATCCAGAT +
Preference number: 5 (lower is better)
Translates to: RRGLILQSSIINDIYQGAGDYKE*ASTHPD
Trigger: ATCTGGATGTGTGGAGGCCAACTCTTTATAATCCCC...TGCCCCCTGATAGATGTCATTGATGATAGAACTCTGGAGTATAAGCCCTCTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR CAA 90 bp GGAGGCGGGCTGGGTAATGTTTTTGAAGACACCTGCAGGCAGAAGCAATATGAACTCCTCATAGCAACTTaGCTCATGTCATCTACCAAA +
Preference number: 5 (lower is better)
Translates to: GGGLGNVFEDTCRQKQYELLIAT*LMSSTK
Trigger: TTTGGTAGATGACATGAGCAAAGTTGCTATGAGGAG...TTCATATTGCTTCTGCCTGCAGGTGTCTTCAAAAACATTACCCAGCCCGCCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000414073.6
ENST00000416269.6
CDS-3UTR CAA 90 bp TTGTTTTTAGAAAGAGGCAGGGATACAGGCTGCATAGCTGCACTTGCAGGCCTGCTCCTCATAGCAACTTaGCTCATGTCATCTACCAAA +
Preference number: 5 (lower is better)
Translates to: LFLERGRDTGCIAALAGLLLIAT*LMSSTK
Trigger: TTTGGTAGATGACATGAGCAAAGTTGCTATGAGGAG...CAGGCCTGCAAGTGCAGCTATGCAGCCTGTATCCCTGCCTCTTTCTAAAAACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416269.6
CDS-3UTR CAA 90 bp AATTGCATTTCACGTAATTCCACGATGTTCCAAACTTACACTCTTGTGACACTACAAGCAGATACCTGGTaGTGCTGGGTTGCGGGGCCA +
Preference number: 5 (lower is better)
Translates to: NCISRNSTMFQTYTLVTLQADTW*CWVAGP
Trigger: TGGCCCCGCAACCCAGCACAACCAGGTATCTGCTTG...TAGTGTCACAAGAGTGTAAGTTTGGAACATCGTGGAATTACGTGAAATGCAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416269.6
CDS TCA 90 bp TGCCGGATGCCATGGTTGCATCAAGAGATCGATGTAAGAGGTGTGTaGTTGGCCTTTGGACTTTGTGTCTTCAGAAGAAAACCATGTTCA +
Preference number: 5 (lower is better)
Translates to: CRMPWLHQEIDVRGV*LAFGLCVFRRKPCS
Trigger: TGAACATGGTTTTCTTCTGAAGACACAAAGTCCAAAGGCCAATCACACACCTCTTACATCGATCTCTTGATGCAACCATGGCATCCGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482845.2
CDS-3UTR CAA 90 bp AATTGCATTTCACGTAATTCCACGATGTTCCAAACTTACACTCTTGTGACACTAGGGCACACCACCATTTaGGGGTCCTTGGCAATGGCA +
Preference number: 5 (lower is better)
Translates to: NCISRNSTMFQTYTLVTLGHTTI*GSLAMA
Trigger: TGCCATTGCCAAGGACCCCAAAATGGTGGTGTGCCC...TAGTGTCACAAGAGTGTAAGTTTGGAACATCGTGGAATTACGTGAAATGCAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392800.7
ENST00000414073.6
ENST00000416269.6
ENST00000431418.6
ENST00000616416.4
CDS-3UTR CAA 90 bp TCCCCTTACAAGAGGAGAGGGCTTATACTCCAGAGTTCTATCATCAATGACATCAAATTCCTCCAGACATaGCAGGTGACCGGATTGGTT +
Preference number: 5 (lower is better)
Translates to: SPYKRRGLILQSSIINDIKFLQT*QVTGLV
Trigger: AACCAATCCGGTCACCTGCAATGTCTGGAGGAATTT...GATGTCATTGATGATAGAACTCTGGAGTATAAGCCCTCTCCTCTTGTAAGGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR CAA 90 bp AGAGGAGAGGGCTTATACTCCAGAGTTCTATCATCAATGACATCTATCAGGGGGGTGTGTGATTGGCCTTaGGACTTTGTGTCTTCAGAA +
Preference number: 5 (lower is better)
Translates to: RGEGLYSRVLSSMTSIRGVCDWP*DFVSSE
Trigger: TTCTGAAGACACAAAGTCCAAAGGCCAATCACACAC...CCCCCTGATAGATGTCATTGATGATAGAACTCTGGAGTATAAGCCCTCTCCTCT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000414073.6
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR CAA 90 bp AGGAGAGGGCTTATACTCCAGAGTTCTATCATCAATGACATCTATCAGGGGGCAGTGTGTGATTGGCCTTaGGACTTTGTGTCTTCAGAA +
Preference number: 5 (lower is better)
Translates to: RRGLILQSSIINDIYQGAVCDWP*DFVSSE
Trigger: TTCTGAAGACACAAAGTCCAAAGGCCAATCACACAC...TGCCCCCTGATAGATGTCATTGATGATAGAACTCTGGAGTATAAGCCCTCTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000414073.6
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR CAA 90 bp CTGATATGTCCTACTCGAGAGCAGGGGATTATAAAGAGTTGGCCTCCACACATCATCCATCTAAATGCCTaGGATGTTGTGTCATCTCGT +
Preference number: 5 (lower is better)
Translates to: LICPTREQGIIKSWPPHIIHLNA*DVVSSR
Trigger: ACGAGATGACACAACATCCAAGGCATTTAGATGGAT...GATGTGTGGAGGCCAACTCTTTATAATCCCCTGCTCTCGAGTAGGACATATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414073.6
ENST00000416269.6
ENST00000426341.6
CDS-3UTR CAA 90 bp AATTGCATTTCACGTAATTCCACGATGTTCCAAACTTACACTCTTGTGACACTAAAGCTCCAATCAGCCTaGCTCGAATCAGCCCCTCTC +
Preference number: 5 (lower is better)
Translates to: NCISRNSTMFQTYTLVTLKLQSA*LESAPL
Trigger: GAGAGGGGCTGATTCGAGCAAGGCTGATTGGAGCTT...TAGTGTCACAAGAGTGTAAGTTTGGAACATCGTGGAATTACGTGAAATGCAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392800.7
ENST00000414073.6
ENST00000416269.6
ENST00000431418.6
ENST00000616416.4
CDS-3UTR CAA 90 bp ATACTCCAGAGTTCTATCATCAATGACATCTATCAGGGGGCACACCACCATTTTGGGGATTATAAAGAGTaGGCCTCCACACATCCAGAT +
Preference number: 5 (lower is better)
Translates to: ILQSSIINDIYQGAHHHFGDYKE*ASTHPD
Trigger: ATCTGGATGTGTGGAGGCCAACTCTTTATAATCCCC...AAAATGGTGGTGTGCCCCCTGATAGATGTCATTGATGATAGAACTCTGGAGTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR CAA 90 bp AGAGGAGAGGGCTTATACTCCAGAGTTCTATCATCAATGACATCTATCAGGGGGATCCATCTAAATGCCTaGGATGTTGTGTCATCTCGT +
Preference number: 5 (lower is better)
Translates to: RGEGLYSRVLSSMTSIRGIHLNA*DVVSSR
Trigger: ACGAGATGACACAACATCCAAGGCATTTAGATGGAT...CCCCCTGATAGATGTCATTGATGATAGAACTCTGGAGTATAAGCCCTCTCCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414073.6
ENST00000416269.6
ENST00000426341.6
CDS-3UTR CAA 90 bp AATTGCATTTCACGTAATTCCACGATGTTCCAAACTTACACTCTTGTGACACTAAGAATTCAATGCTGGTaGTGCTGGGTTGCGGGGCCA +
Preference number: 5 (lower is better)
Translates to: NCISRNSTMFQTYTLVTLRIQCW*CWVAGP
Trigger: TGGCCCCGCAACCCAGCACAACCAGCATTGAATTCT...TAGTGTCACAAGAGTGTAAGTTTGGAACATCGTGGAATTACGTGAAATGCAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431418.6
CDS TCA 90 bp GGCTTTTCTTCTGCCAGCTGCTCACATGATTATGGTGCAAATATATaGATAACAGAGCTGTCCAGATCCCAAATGTCAAGGACCCATAGA +
Preference number: 5 (lower is better)
Translates to: GFSSASCSHDYGANI*ITELSRSQMSRTHR
Trigger: TCTATGGGTCCTTGACATTTGGGATCTGGACAGCTCTGTTATTCATATATTTGCACCATAATCATGTGAGCAGCTGGCAGAAGAAAAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000392800.7
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000431418.6
ENST00000448366.6
ENST00000616416.4
CDS-3UTR CAA 90 bp CTTACTGATATGTCCTACTCGAGAGCAGGGGATTATAAAGAGTTGGCCTCCACACTATTACATGAGGTTTaGGTATTTGCTCTGAGCCAT +
Preference number: 5 (lower is better)
Translates to: LTDMSYSRAGDYKELASTLLHEV*VFALSH
Trigger: ATGGCTCAGAGCAAATACCAAAACCTCATGTAATAG...TGTGGAGGCCAACTCTTTATAATCCCCTGCTCTCGAGTAGGACATATCAGTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR CAA 90 bp TTTAATTGCATTTCACGTAATTCCACGATGTTCCAAACTTACACTCTTGTGACAAAGCTCCAATCAGCCTaGCTCGAATCAGCCCCTCTC +
Preference number: 5 (lower is better)
Translates to: FNCISRNSTMFQTYTLVTKLQSA*LESAPL
Trigger: GAGAGGGGCTGATTCGAGCAAGGCTGATTGGAGCTT...TGTCACAAGAGTGTAAGTTTGGAACATCGTGGAATTACGTGAAATGCAATTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392800.7
ENST00000414073.6
ENST00000416269.6
ENST00000431418.6
ENST00000616416.4
CDS-3UTR CAA 90 bp TACAAGAGGAGAGGGCTTATACTCCAGAGTTCTATCATCAATGACATCTATCAGAAATTCCTCCAGACATaGCAGGTGACCGGATTGGTT +
Preference number: 5 (lower is better)
Translates to: YKRRGLILQSSIINDIYQKFLQT*QVTGLV
Trigger: AACCAATCCGGTCACCTGCAATGTCTGGAGGAATTT...CTGATAGATGTCATTGATGATAGAACTCTGGAGTATAAGCCCTCTCCTCTTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR CAA 90 bp CAATCAAAAGTTCCCCTTACAAGAGGAGAGGGCTTATACTCCAGAGTTCTATCAGTGTGTGATTGGCCTTaGGACTTTGTGTCTTCAGAA +
Preference number: 5 (lower is better)
Translates to: QSKVPLTRGEGLYSRVLSVCDWP*DFVSSE
Trigger: TTCTGAAGACACAAAGTCCAAAGGCCAATCACACAC...TGATAGAACTCTGGAGTATAAGCCCTCTCCTCTTGTAAGGGGAACTTTTGATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414073.6
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR CAA 90 bp CCCCTTACAAGAGGAGAGGGCTTATACTCCAGAGTTCTATCATCAATGACATCTATCCATCTAAATGCCTaGGATGTTGTGTCATCTCGT +
Preference number: 5 (lower is better)
Translates to: PLTRGEGLYSRVLSSMTSIHLNA*DVVSSR
Trigger: ACGAGATGACACAACATCCAAGGCATTTAGATGGAT...AGATGTCATTGATGATAGAACTCTGGAGTATAAGCCCTCTCCTCTTGTAAGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414073.6
ENST00000416269.6
ENST00000426341.6
CDS-3UTR CAA 90 bp AGTTGGCCTCCACACATCCAGATCCTTAGTGAAAGTTCCAAATTTTCTCTTCCCCTATTACATGAGGTTTaGGTATTTGCTCTGAGCCAT +
Preference number: 5 (lower is better)
Translates to: SWPPHIQILSESSKFSLPLLHEV*VFALSH
Trigger: ATGGCTCAGAGCAAATACCAAAACCTCATGTAATAG...GGGAAGAGAAAATTTGGAACTTTCACTAAGGATCTGGATGTGTGGAGGCCAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR CAA 90 bp CCCCTTACAAGAGGAGAGGGCTTATACTCCAGAGTTCTATCATCAATGACATCTCTATTACATGAGGTTTaGGTATTTGCTCTGAGCCAT +
Preference number: 5 (lower is better)
Translates to: PLTRGEGLYSRVLSSMTSLLHEV*VFALSH
Trigger: ATGGCTCAGAGCAAATACCAAAACCTCATGTAATAG...AGATGTCATTGATGATAGAACTCTGGAGTATAAGCCCTCTCCTCTTGTAAGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR CAA 90 bp AAGAGGAGAGGGCTTATACTCCAGAGTTCTATCATCAATGACATCTATCAGGGGCTATTACATGAGGTTTaGGTATTTGCTCTGAGCCAT +
Preference number: 5 (lower is better)
Translates to: KRRGLILQSSIINDIYQGLLHEV*VFALSH
Trigger: ATGGCTCAGAGCAAATACCAAAACCTCATGTAATAG...CCCCTGATAGATGTCATTGATGATAGAACTCTGGAGTATAAGCCCTCTCCTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
CDS-3UTR CAA 90 bp TGCATTTCACGTAATTCCACGATGTTCCAAACTTACACTCTTGTGACACTATGTAAATTCCTCCAGACATaGCAGGTGACCGGATTGGTT +
Preference number: 5 (lower is better)
Translates to: CISRNSTMFQTYTLVTLCKFLQT*QVTGLV
Trigger: AACCAATCCGGTCACCTGCAATGTCTGGAGGAATTT...ACATAGTGTCACAAGAGTGTAAGTTTGGAACATCGTGGAATTACGTGAAATGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392800.7
ENST00000414073.6
ENST00000416269.6
ENST00000431418.6
ENST00000616416.4
CDS-3UTR CAA 90 bp AATTGCATTTCACGTAATTCCACGATGTTCCAAACTTACACTCTTGTGACACTAAAATTCCTCCAGACATaGCAGGTGACCGGATTGGTT +
Preference number: 5 (lower is better)
Translates to: NCISRNSTMFQTYTLVTLKFLQT*QVTGLV
Trigger: AACCAATCCGGTCACCTGCAATGTCTGGAGGAATTT...TAGTGTCACAAGAGTGTAAGTTTGGAACATCGTGGAATTACGTGAAATGCAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392800.7
ENST00000414073.6
ENST00000416269.6
ENST00000431418.6
ENST00000616416.4
CDS-3UTR CAA 90 bp AATTGCATTTCACGTAATTCCACGATGTTCCAAACTTACACTCTTGTGACACTAGGGGATTATAAAGAGTaGGCCTCCACACATCCAGAT +
Preference number: 5 (lower is better)
Translates to: NCISRNSTMFQTYTLVTLGDYKE*ASTHPD
Trigger: ATCTGGATGTGTGGAGGCCAACTCTTTATAATCCCC...TAGTGTCACAAGAGTGTAAGTTTGGAACATCGTGGAATTACGTGAAATGCAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392800.7
ENST00000414073.6
ENST00000416269.6
ENST00000431418.6
ENST00000616416.4
CDS-3UTR CAA 90 bp TGCATTTCACGTAATTCCACGATGTTCCAAACTTACACTCTTGTGACACTATGTGTGTGTGATTGGCCTTaGGACTTTGTGTCTTCAGAA +
Preference number: 5 (lower is better)
Translates to: CISRNSTMFQTYTLVTLCVCDWP*DFVSSE
Trigger: TTCTGAAGACACAAAGTCCAAAGGCCAATCACACAC...ACATAGTGTCACAAGAGTGTAAGTTTGGAACATCGTGGAATTACGTGAAATGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000414073.6
ENST00000416269.6
ENST00000431418.6
ENST00000616416.4
CDS-3UTR CAA 90 bp TGCATTTCACGTAATTCCACGATGTTCCAAACTTACACTCTTGTGACACTATGTGAGGGATCTTCTTCCTaGTTTTTAGAAAGAGGCAGG +
Preference number: 5 (lower is better)
Translates to: CISRNSTMFQTYTLVTLCEGSSS*FLERGR
Trigger: CCTGCCTCTTTCTAAAAACAAGGAAGAAGATCCCTC...ACATAGTGTCACAAGAGTGTAAGTTTGGAACATCGTGGAATTACGTGAAATGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416269.6
CDS-3UTR CAA 90 bp TTTAATTGCATTTCACGTAATTCCACGATGTTCCAAACTTACACTCTTGTGACAAAATTCCTCCAGACATaGCAGGTGACCGGATTGGTT +
Preference number: 5 (lower is better)
Translates to: FNCISRNSTMFQTYTLVTKFLQT*QVTGLV
Trigger: AACCAATCCGGTCACCTGCAATGTCTGGAGGAATTT...TGTCACAAGAGTGTAAGTTTGGAACATCGTGGAATTACGTGAAATGCAATTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392800.7
ENST00000414073.6
ENST00000416269.6
ENST00000431418.6
ENST00000616416.4
CDS-3UTR CAA 90 bp TTTAATTGCATTTCACGTAATTCCACGATGTTCCAAACTTACACTCTTGTGACAGGGGATTATAAAGAGTaGGCCTCCACACATCCAGAT +
Preference number: 5 (lower is better)
Translates to: FNCISRNSTMFQTYTLVTGDYKE*ASTHPD
Trigger: ATCTGGATGTGTGGAGGCCAACTCTTTATAATCCCC...TGTCACAAGAGTGTAAGTTTGGAACATCGTGGAATTACGTGAAATGCAATTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392800.7
ENST00000414073.6
ENST00000416269.6
ENST00000431418.6
ENST00000616416.4
CDS CCA 90 bp ATGGTTGCATCAAGAGATCGATGTAAGAGGTGTGTGATTGGCCTTTaGACTTTGTGTCTTCAGAAGAAAACCATGTTCAGTTATTTTCTT +
Preference number: 5 (lower is better)
Translates to: MVASRDRCKRCVIGL*TLCLQKKTMFSYFL
Trigger: AAGAAAATAACTGAACATGGTTTTCTTCTGAAGACACAAAGTCCAAAGGCCAATCACACACCTCTTACATCGATCTCTTGATGCAACCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482845.2
CDS-3UTR CAA 90 bp TGCATTTCACGTAATTCCACGATGTTCCAAACTTACACTCTTGTGACACTATGTGGCTGGGTAATGTTTTaGAAGACACATTTTACTCCT +
Preference number: 5 (lower is better)
Translates to: CISRNSTMFQTYTLVTLCGWVMF*KTHFTP
Trigger: AGGAGTAAAATGTGTCTTCAAAAACATTACCCAGCC...ACATAGTGTCACAAGAGTGTAAGTTTGGAACATCGTGGAATTACGTGAAATGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392800.7
ENST00000431418.6
ENST00000616416.4
CDS-3UTR CAA 90 bp TTTAATTGCATTTCACGTAATTCCACGATGTTCCAAACTTACACTCTTGTGACAGTGTGTGATTGGCCTTaGGACTTTGTGTCTTCAGAA +
Preference number: 5 (lower is better)
Translates to: FNCISRNSTMFQTYTLVTVCDWP*DFVSSE
Trigger: TTCTGAAGACACAAAGTCCAAAGGCCAATCACACAC...TGTCACAAGAGTGTAAGTTTGGAACATCGTGGAATTACGTGAAATGCAATTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000414073.6
ENST00000416269.6
ENST00000431418.6
ENST00000616416.4
CDS CCA 90 bp TTTCAATTTCCAAGAGATCGATGTAAGAGGTGTGTGATTGGCCTTTaGACTTTGTGTCTTCAGAAGAAAACCATGTTCAGTTATTTTCTT +
Preference number: 5 (lower is better)
Translates to: FQFPRDRCKRCVIGL*TLCLQKKTMFSYFL
Trigger: AAGAAAATAACTGAACATGGTTTTCTTCTGAAGACACAAAGTCCAAAGGCCAATCACACACCTCTTACATCGATCTCTTGGAAATTGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000414073.6
ENST00000416269.6
ENST00000426341.6
ENST00000431418.6
ENST00000448366.6
ENST00000616416.4
CDS-3UTR CAA 90 bp TTTAATTGCATTTCACGTAATTCCACGATGTTCCAAACTTACACTCTTGTGACACTATTACATGAGGTTTaGGTATTTGCTCTGAGCCAT +
Preference number: 5 (lower is better)
Translates to: FNCISRNSTMFQTYTLVTLLHEV*VFALSH
Trigger: ATGGCTCAGAGCAAATACCAAAACCTCATGTAATAG...TGTCACAAGAGTGTAAGTTTGGAACATCGTGGAATTACGTGAAATGCAATTAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392800.7
ENST00000414073.6
ENST00000416269.6
ENST00000431418.6
ENST00000616416.4
CDS-3UTR CAA 90 bp TTTAATTGCATTTCACGTAATTCCACGATGTTCCAAACTTACACTCTTGTGACAGGCTGGGTAATGTTTTaGAAGACACATTTTACTCCT +
Preference number: 5 (lower is better)
Translates to: FNCISRNSTMFQTYTLVTGWVMF*KTHFTP
Trigger: AGGAGTAAAATGTGTCTTCAAAAACATTACCCAGCC...TGTCACAAGAGTGTAAGTTTGGAACATCGTGGAATTACGTGAAATGCAATTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392800.7
ENST00000431418.6
ENST00000616416.4
CDS CCA 72 bp GGGACTCTGGAGAGCGCAAGCTGCCTGTGGGGTGGGTaGAGTCTCTTCTGGAAGCTGCACTGCCATCTAGGC +
Preference number: 6 (lower is better)
Translates to: GTLESASCLWGG*SLFWKLHCHLG
Trigger: GCCTAGATGGCAGTGCAGCTTCCAGAAGAGACTCCACCCACCCCACAGGCAGCTTGCGCTCTCCAGAGTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482845.2
CDS GCA 72 bp CATCTGCCTGCATCTCAGGCGGTTTCCTTCATGCCCTaGAGGTACGGCACAGCATTCACCGCAGGCTGCCCA +
Preference number: 6 (lower is better)
Translates to: HLPASQAVSFMP*RYGTAFTAGCP
Trigger: TGGGCAGCCTGCGGTGAATGCTGTGCCGTACCTGCAGGGCATGAAGGAAACCGCCTGAGATGCAGGCAGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483959.1
CDS GCA 72 bp ACCCCTGCCTTCTCCTCCTCTGCGGGGTTATCCATCTaGCTGCATCTCAGGCGGTTTCCTTCATGCCCTGCA +
Preference number: 6 (lower is better)
Translates to: TPAFSSSAGLSI*LHLRRFPSCPA
Trigger: TGCAGGGCATGAAGGAAACCGCCTGAGATGCAGGCAGATGGATAACCCCGCAGAGGAGGAGAAGGCAGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483959.1
CDS TCA 72 bp ATTTTAGGGCTAAGCCACCCTCCAGGCGGCTGGCCCTaGGCATCCCATTGCTGGTGGAAAGGTGGTGTTCTG +
Preference number: 6 (lower is better)
Translates to: ILGLSHPPGGWP*ASHCWWKGGVL
Trigger: CAGAACACCACCTTTCCACCAGCAATGGGATGCTCAGGGCCAGCCGCCTGGAGGGTGGCTTAGCCCTAAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482845.2
CDS CCA 72 bp CGGCTGGCCCTGAGCATCCCATTGCTGGTGGAAAGGTaGTGTTCTGAAAGCCCCTGGCATACTGTGGCTGAT +
Preference number: 6 (lower is better)
Translates to: RLALSIPLLVER*CSESPWHTVAD
Trigger: ATCAGCCACAGTATGCCAGGGGCTTTCAGAACACCACCTTTCCACCAGCAATGGGATGCTCAGGGCCAGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482845.2
CDS GCA 72 bp TTATCCATCTGCCTGCATCTCAGGCGGTTTCCTTCATaGCCTGCAGGTACGGCACAGCATTCACCGCAGGCT +
Preference number: 6 (lower is better)
Translates to: LSICLHLRRFPS*PAGTAQHSPQA
Trigger: AGCCTGCGGTGAATGCTGTGCCGTACCTGCAGGGCATGAAGGAAACCGCCTGAGATGCAGGCAGATGGATAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483959.1
CDS CCA 72 bp ATGGTGGCTGGGTTCCAAGCAGATACCTGGTTGTGCTaGGTTGCGGGGCCACACAGTAGTACTCAAAGGGCA +
Preference number: 6 (lower is better)
Translates to: MVAGFQADTWLC*VAGPHSSTQRA
Trigger: TGCCCTTTGAGTACTACTGTGTGGCCCCGCAACCCAGCACAACCAGGTATCTGCTTGGAACCCAGCCACCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416062.5
ENST00000448366.6
CDS CCA 72 bp GCAGGCTTTATGGTGGCTGGGTTCCAAGCAGATACCTaGTTGTGCTGGGTTGCGGGGCCACACAGTAGTACT +
Preference number: 6 (lower is better)
Translates to: AGFMVAGFQADT*LCWVAGPHSST
Trigger: AGTACTACTGTGTGGCCCCGCAACCCAGCACAACCAGGTATCTGCTTGGAACCCAGCCACCATAAAGCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416062.5
ENST00000448366.6
CDS CAA 72 bp TGGCTGGGTTCCAAGCAGATACCTGGTTGTGCTGGGTaGCGGGGCCACACAGTAGTACTCAAAGGGCAGTAC +
Preference number: 6 (lower is better)
Translates to: WLGSKQIPGCAG*RGHTVVLKGQY
Trigger: GTACTGCCCTTTGAGTACTACTGTGTGGCCCCGCAACCCAGCACAACCAGGTATCTGCTTGGAACCCAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416062.5
CDS CAA 72 bp GGCTTTATGGTGGCTGGGTTCCAAGCAGATACCTGGTaGTGCTGGGTTGCGGGGCCACACAGTAGTACTCAA +
Preference number: 6 (lower is better)
Translates to: GFMVAGFQADTW*CWVAGPHSSTQ
Trigger: TTGAGTACTACTGTGTGGCCCCGCAACCCAGCACAACCAGGTATCTGCTTGGAACCCAGCCACCATAAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416062.5
ENST00000448366.6
CDS GCA 72 bp TTTATGGTGGCTGGGTTCCAAGCAGATACCTGGTTGTaGTGGGTTGCGGGGCCACACAGTAGTACTCAAAGG +
Preference number: 6 (lower is better)
Translates to: FMVAGFQADTWL*WVAGPHSSTQR
Trigger: CCTTTGAGTACTACTGTGTGGCCCCGCAACCCAGCACAACCAGGTATCTGCTTGGAACCCAGCCACCATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416062.5
ENST00000448366.6
CDS TCA 72 bp TGGAAGCTGCACTGCCATCTAGGCTCTTCCTCTGATTaGACCTACTTGTGTCCCTGCCTTGCAGTGTTTGTC +
Preference number: 6 (lower is better)
Translates to: WKLHCHLGSSSD*TYLCPCLAVFV
Trigger: GACAAACACTGCAAGGCAGGGACACAAGTAGGTTCAATCAGAGGAAGAGCCTAGATGGCAGTGCAGCTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482845.2
CDS TCA 72 bp CTTCTGGAAGCTGCACTGCCATCTAGGCTCTTCCTCTaGTTGAACCTACTTGTGTCCCTGCCTTGCAGTGTT +
Preference number: 6 (lower is better)
Translates to: LLEAALPSRLFL*LNLLVSLPCSV
Trigger: AACACTGCAAGGCAGGGACACAAGTAGGTTCAATCAGAGGAAGAGCCTAGATGGCAGTGCAGCTTCCAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482845.2
CDS CAA 72 bp TGTATGGTTAAAATCTGTACAGTTCTGCAGGAAGCATaGAGCCAGCATCTGCTCCTGGTGGGGGCCTCAGGA +
Preference number: 6 (lower is better)
Translates to: CMVKICTVLQEA*SQHLLLVGASG
Trigger: TCCTGAGGCCCCCACCAGGAGCAGATGCTGGCTCAATGCTTCCTGCAGAACTGTACAGATTTTAACCATACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468278.1
CDS CAA 90 bp TTCTGGGTTTGTATGGTTAAAATCTGTACAGTTCTGCAGGAAGCATaGAGCCAGCATCTGCTCCTGGTGGGGGCCTCAGGAAGCTTCCAA +
Preference number: 6 (lower is better)
Translates to: FWVCMVKICTVLQEA*SQHLLLVGASGSFQ
Trigger: TTGGAAGCTTCCTGAGGCCCCCACCAGGAGCAGATGCTGGCTCAATGCTTCCTGCAGAACTGTACAGATTTTAACCATACAAACCCAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468278.1
CDS CAA 72 bp CTAAAAGATGCAGAATTCAATGCTGGTTGTGCTGGGTaGCGGGGCCACACAGTAGTACTCAAAGGGCAGTAC +
Preference number: 6 (lower is better)
Translates to: LKDAEFNAGCAG*RGHTVVLKGQY
Trigger: GTACTGCCCTTTGAGTACTACTGTGTGGCCCCGCAACCCAGCACAACCAGCATTGAATTCTGCATCTTTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431418.6
CDS CCA 72 bp GAAGCAAATGACAATGCTGGCAGTCGGGAGGCGGGCTaGGTAATGTTTTTGAAGACACATTTTACTCCTGGT +
Preference number: 6 (lower is better)
Translates to: EANDNAGSREAG*VMFLKTHFTPG
Trigger: ACCAGGAGTAAAATGTGTCTTCAAAAACATTACCCAGCCCGCCTCCCGACTGCCAGCATTGTCATTTGCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000392800.7
ENST00000431418.6
ENST00000616416.4
CDS CCA 72 bp AACAGCCACGTGGACAGCACCACCGGCCCAGAGAAATaGACAGATAGTGATGAGAATTATGAAGAGAAAGAA +
Preference number: 6 (lower is better)
Translates to: NSHVDSTTGPEK*TDSDENYEEKE
Trigger: TTCTTTCTCTTCATAATTCTCATCACTATCTGTCCATTTCTCTGGGCCGGTGGTGCTGTCCACGTGGCTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483959.1
CDS CAA 72 bp CTGATTGAACCTACTTGTGTCCCTGCCTTGCAGTGTTaGTCCCCAGATCTGCTCCGAATAAAGTTTTCCATG +
Preference number: 6 (lower is better)
Translates to: LIEPTCVPALQC*SPDLLRIKFSM
Trigger: CATGGAAAACTTTATTCGGAGCAGATCTGGGGACAAACACTGCAAGGCAGGGACACAAGTAGGTTCAATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482845.2
CDS CAA 90 bp GCTCTTCCTCTGATTGAACCTACTTGTGTCCCTGCCTTGCAGTGTTaGTCCCCAGATCTGCTCCGAATAAAGTTTTCCATGCAAATCTTA +
Preference number: 6 (lower is better)
Translates to: ALPLIEPTCVPALQC*SPDLLRIKFSMQIL
Trigger: TAAGATTTGCATGGAAAACTTTATTCGGAGCAGATCTGGGGACAAACACTGCAAGGCAGGGACACAAGTAGGTTCAATCAGAGGAAGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482845.2
CDS TCA 72 bp TTTGTAACTGATGAATTTTCCAAGCAGAGTCACAGCTaGATGAGGCAGGGGTCTGTGCCGAATGAACTGAGA +
Preference number: 6 (lower is better)
Translates to: FVTDEFSKQSHS*MRQGSVPNELR
Trigger: TCTCAGTTCATTCGGCACAGACCCCTGCCTCATTCAGCTGTGACTCTGCTTGGAAAATTCATCAGTTACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000392800.7
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000448366.6
ENST00000482845.2
ENST00000616416.4
CDS TCA 72 bp TCTGCCAGCTGCTCACATGATTATGGTGCAAATATATaGATAACAGAGCTGTCCAGATCCCAAATGTCAAGG +
Preference number: 6 (lower is better)
Translates to: SASCSHDYGANI*ITELSRSQMSR
Trigger: CCTTGACATTTGGGATCTGGACAGCTCTGTTATTCATATATTTGCACCATAATCATGTGAGCAGCTGGCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000392800.7
ENST00000414073.6
ENST00000416062.5
ENST00000416269.6
ENST00000426341.6
ENST00000431418.6
ENST00000448366.6
ENST00000616416.4
CDS TCA 72 bp CCATGGTTGCATCAAGAGATCGATGTAAGAGGTGTGTaGTTGGCCTTTGGACTTTGTGTCTTCAGAAGAAAA +
Preference number: 6 (lower is better)
Translates to: PWLHQEIDVRGV*LAFGLCVFRRK
Trigger: TTTTCTTCTGAAGACACAAAGTCCAAAGGCCAATCACACACCTCTTACATCGATCTCTTGATGCAACCATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482845.2
CDS CCA 72 bp CCAAGAGATCGATGTAAGAGGTGTGTGATTGGCCTTTaGACTTTGTGTCTTCAGAAGAAAACCATGTTCAGT +
Preference number: 6 (lower is better)
Translates to: PRDRCKRCVIGL*TLCLQKKTMFS
Trigger: ACTGAACATGGTTTTCTTCTGAAGACACAAAGTCCAAAGGCCAATCACACACCTCTTACATCGATCTCTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000414073.6
ENST00000416269.6
ENST00000426341.6
ENST00000431418.6
ENST00000448366.6
ENST00000616416.4
CDS CCA 72 bp TCAAGAGATCGATGTAAGAGGTGTGTGATTGGCCTTTaGACTTTGTGTCTTCAGAAGAAAACCATGTTCAGT +
Preference number: 6 (lower is better)
Translates to: SRDRCKRCVIGL*TLCLQKKTMFS
Trigger: ACTGAACATGGTTTTCTTCTGAAGACACAAAGTCCAAAGGCCAATCACACACCTCTTACATCGATCTCTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482845.2
CDS GCA 72 bp AGGAGTAATTATAAATATTGCAAGGTAGATGGCTATTaGCGGATGCCATGGTTGCATCAAGAGATCGATGTA +
Preference number: 6 (lower is better)
Translates to: RSNYKYCKVDGY*RMPWLHQEIDV
Trigger: TACATCGATCTCTTGATGCAACCATGGCATCCGGCAATAGCCATCTACCTTGCAATATTTATAATTACTCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482845.2
CDS TCA 72 bp TTTTTCAATTTCCAAGAGATCGATGTAAGAGGTGTGTaGTTGGCCTTTGGACTTTGTGTCTTCAGAAGAAAA +
Preference number: 6 (lower is better)
Translates to: FFNFQEIDVRGV*LAFGLCVFRRK
Trigger: TTTTCTTCTGAAGACACAAAGTCCAAAGGCCAATCACACACCTCTTACATCGATCTCTTGGAAATTGAAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000414073.6
ENST00000416269.6
ENST00000426341.6
ENST00000431418.6
ENST00000448366.6
ENST00000616416.4
CDS CAA 90 bp AATGCCTTGGATGTTGTGTCATCTCGTTCAAACACTTCTCCTTATTaGCATCTTTTTGACTCTTTACTCCTTCAACTGATAATTATGGTA +
Preference number: 6 (lower is better)
Translates to: NALDVVSSRSNTSPY*HLFDSLLLQLIIMV
Trigger: TACCATAATTATCAGTTGAAGGAGTAAAGAGTCAAAAAGATGCAAATAAGGAGAAGTGTTTGAACGAGATGACACAACATCCAAGGCATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000414073.6
ENST00000416269.6
ENST00000426341.6
ENST00000468278.1