RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GALNT9 (Homo sapiens)

Ensembl gene IDs: ENSG00000182870

Ensembl transcript IDs: ENST00000328957.13, ENST00000397325.6, ENST00000411988.6, ENST00000424720.6, ENST00000535208.1, ENST00000538356.1, ENST00000540493.1, ENST00000541995.5, ENST00000542942.1, ENST00000614360.1, ENST00000671851.1, ENST00000671997.1, ENST00000672032.1, ENST00000672682.1, ENST00000672816.1, ENST00000672872.1, ENST00000672944.1, ENST00000673050.1, ENST00000673376.1, ENST00000673497.1

Found 764 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCCTCTGCTGTCCTGGCCGCACATAGAGCCCTGTCCTGCTGTGTCTaGCGGGCACACCCCGGTCACTCAGCCACACTGGCTCGGCCCAGC +
Preference number: 1 (lower is better)
Translates to: ASAVLAAHRALSCCV*RAHPGHSATLARPS
Trigger: GCTGGGCCGAGCCAGTGTGGCTGAGTGACCGGGGTGTGCCCGGCAGACACAGCAGGACAGGGCTCTATGTGCGGCCAGGACAGCAGAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
3UTR CCA 90 bp CCCTGGTCACTCAGCCACACCCCGGCCCCTCAGCCTCTGCTGTCCTaGCCGCACATAGAGCCCTGTCCTGCTGTGTCTGCCGGGCACACC +
Preference number: 1 (lower is better)
Translates to: PWSLSHTPAPQPLLS*PHIEPCPAVSAGHT
Trigger: GGTGTGCCCGGCAGACACAGCAGGACAGGGCTCTATGTGCGGCCAGGACAGCAGAGGCTGAGGGGCCGGGGTGTGGCTGAGTGACCAGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
3UTR GCA 90 bp GGCCCCTCAGCCTCTGCTGTCCTGGCCGCACATAGAGCCCTGTCCTaGTGTGTCTGCCGGGCACACCCCGGTCACTCAGCCACACTGGCT +
Preference number: 1 (lower is better)
Translates to: GPSASAVLAAHRALS*CVCRAHPGHSATLA
Trigger: AGCCAGTGTGGCTGAGTGACCGGGGTGTGCCCGGCAGACACAGCAGGACAGGGCTCTATGTGCGGCCAGGACAGCAGAGGCTGAGGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
3UTR CCA 90 bp CTTGGTTGGAGGGCTGAGCGGCCGCAAGTGCTGGGGGAGGCTGCTTaGAGCATGGGAGGCCTGCGGGTGGAAGACACCAGGGTGCAGCCT +
Preference number: 1 (lower is better)
Translates to: LGWRAERPQVLGEAA*SMGGLRVEDTRVQP
Trigger: AGGCTGCACCCTGGTGTCTTCCACCCGCAGGCCTCCCATGCTCCAAGCAGCCTCCCCCAGCACTTGCGGCCGCTCAGCCCTCCAACCAAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
3UTR CCA 90 bp CGGGTAGAGCCGCCTGTCCTAGGAGAAGCTGTACTCCAGATGCAGTaGGTGACACCCTGGTCACTCAGCCACACCCCGGCCCCTCAGCCT +
Preference number: 1 (lower is better)
Translates to: RVEPPVLGEAVLQMQ*VTPWSLSHTPAPQP
Trigger: AGGCTGAGGGGCCGGGGTGTGGCTGAGTGACCAGGGTGTCACCCACTGCATCTGGAGTACAGCTTCTCCTAGGACAGGCGGCTCTACCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
3UTR CCA 90 bp CAGACCACAAGGAGCTGCATTATGATGTGTGACTTAGGTCTTGGTTaGAGGGCTGAGCGGCCGCAAGTGCTGGGGGAGGCTGCTTGGAGC +
Preference number: 1 (lower is better)
Translates to: QTTRSCIMMCDLGLG*RAERPQVLGEAAWS
Trigger: GCTCCAAGCAGCCTCCCCCAGCACTTGCGGCCGCTCAGCCCTCCAACCAAGACCTAAGTCACACATCATAATGCAGCTCCTTGTGGTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
3UTR CCA 90 bp CCCAGGAAGACACACACAGTGCTGCTGCCTAATCCTCTCTTTATTTaGTCTCTGCTGAAGCAGTCGTGCCAGCCTCCTAGACACGGCCTC +
Preference number: 1 (lower is better)
Translates to: PRKTHTVLLPNPLFI*SLLKQSCQPPRHGL
Trigger: GAGGCCGTGTCTAGGAGGCTGGCACGACTGCTTCAGCAGAGACCAAATAAAGAGAGGATTAGGCAGCAGCACTGTGTGTGTCTTCCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000671997.1
ENST00000672944.1
3UTR TCA 90 bp CACACACAGTGCTGCTGCCTAATCCTCTCTTTATTTGGTCTCTGCTaGAGCAGTCGTGCCAGCCTCCTAGACACGGCCTCAGGTTTGTCG +
Preference number: 1 (lower is better)
Translates to: HTQCCCLILSLFGLC*SSRASLLDTASGLS
Trigger: CGACAAACCTGAGGCCGTGTCTAGGAGGCTGGCACGACTGCTTCAGCAGAGACCAAATAAAGAGAGGATTAGGCAGCAGCACTGTGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000671997.1
ENST00000672944.1
3UTR-3UTR GCA 90 bp GGGGCTGTGGTACATGCAGAGGCGGCGGCTGTCCCAGCAGCCTGGCCAGGAGATCTGTCCTGCTGTGTCTaGCGGGCACACCCCGGTCAC +
Preference number: 2 (lower is better)
Translates to: GAVVHAEAAAVPAAWPGDLSCCV*RAHPGH
Trigger: GTGACCGGGGTGTGCCCGGCAGACACAGCAGGACAG...ATCTCCTGGCCAGGCTGCTGGGACAGCCGCCGCCTCTGCATGTACCACAGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
3UTR-3UTR GCA 90 bp GGGGAGGCTGCTTGGAGCATGGGAGGCCTGCGGGTGGAAGACACCAGGGTGCAGCTGTCCTGCTGTGTCTaGCGGGCACACCCCGGTCAC +
Preference number: 2 (lower is better)
Translates to: GEAAWSMGGLRVEDTRVQLSCCV*RAHPGH
Trigger: GTGACCGGGGTGTGCCCGGCAGACACAGCAGGACAG...CTGCACCCTGGTGTCTTCCACCCGCAGGCCTCCCATGCTCCAAGCAGCCTCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
3UTR-3UTR GCA 90 bp GGGCTGTGGTACATGCAGAGGCGGCGGCTGTCCCAGCAGCCTGGCCAGGAGATACTGTCCTGCTGTGTCTaGCGGGCACACCCCGGTCAC +
Preference number: 2 (lower is better)
Translates to: GLWYMQRRRLSQQPGQEILSCCV*RAHPGH
Trigger: GTGACCGGGGTGTGCCCGGCAGACACAGCAGGACAG...TATCTCCTGGCCAGGCTGCTGGGACAGCCGCCGCCTCTGCATGTACCACAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
3UTR-3UTR CCA 90 bp GTCTTGGTTGGAGGGCTGAGCGGCCGCAAGTGCTGGGGGAGGCTGCTTGGAGCAGTCACTCAGCCACACTaGCTCGGCCCAGCGCCTTCC +
Preference number: 2 (lower is better)
Translates to: VLVGGLSGRKCWGRLLGAVTQPH*LGPAPS
Trigger: GGAAGGCGCTGGGCCGAGCCAGTGTGGCTGAGTGAC...TGCTCCAAGCAGCCTCCCCCAGCACTTGCGGCCGCTCAGCCCTCCAACCAAGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
3UTR-3UTR CCA 90 bp GGGGCTGTGGTACATGCAGAGGCGGCGGCTGTCCCAGCAGCCTGGCCAGGAGATCAGTGGGTGACACCCTaGTCACTCAGCCACACCCCG +
Preference number: 2 (lower is better)
Translates to: GAVVHAEAAAVPAAWPGDQWVTP*SLSHTP
Trigger: CGGGGTGTGGCTGAGTGACCAGGGTGTCACCCACTG...ATCTCCTGGCCAGGCTGCTGGGACAGCCGCCGCCTCTGCATGTACCACAGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
3UTR-3UTR CCA 90 bp GTCTTGGTTGGAGGGCTGAGCGGCCGCAAGTGCTGGGGGAGGCTGCTTGGAGCATGGGAGGCCTGCGGGTaGAAGACACCAGGGTGCAGC +
Preference number: 2 (lower is better)
Translates to: VLVGGLSGRKCWGRLLGAWEACG*KTPGCS
Trigger: GCTGCACCCTGGTGTCTTCCACCCGCAGGCCTCCCA...TGCTCCAAGCAGCCTCCCCCAGCACTTGCGGCCGCTCAGCCCTCCAACCAAGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
3UTR-3UTR CCA 90 bp GGGCTGTGGTACATGCAGAGGCGGCGGCTGTCCCAGCAGCCTGGCCAGGAGATACAGTGGGTGACACCCTaGTCACTCAGCCACACCCCG +
Preference number: 2 (lower is better)
Translates to: GLWYMQRRRLSQQPGQEIQWVTP*SLSHTP
Trigger: CGGGGTGTGGCTGAGTGACCAGGGTGTCACCCACTG...TATCTCCTGGCCAGGCTGCTGGGACAGCCGCCGCCTCTGCATGTACCACAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
3UTR-3UTR CCA 90 bp GTCTTGGTTGGAGGGCTGAGCGGCCGCAAGTGCTGGGGGAGGCTGCTTGGAGCACCTCCCTATGGGGCGTaGGGGGCTGTGGTACATGCA +
Preference number: 2 (lower is better)
Translates to: VLVGGLSGRKCWGRLLGAPPYGA*GAVVHA
Trigger: TGCATGTACCACAGCCCCCCACGCCCCATAGGGAGG...TGCTCCAAGCAGCCTCCCCCAGCACTTGCGGCCGCTCAGCCCTCCAACCAAGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
3UTR-3UTR CCA 90 bp CGGGTAGAGCCGCCTGTCCTAGGAGAAGCTGTACTCCAGATGCAGTGGGTGACACCTTCCCGAGGTCTGTaGGGGTCCGGGCGGAGGTGG +
Preference number: 2 (lower is better)
Translates to: RVEPPVLGEAVLQMQWVTPSRGL*GSGRRW
Trigger: CCACCTCCGCCCGGACCCCCACAGACCTCGGGAAGG...TGTCACCCACTGCATCTGGAGTACAGCTTCTCCTAGGACAGGCGGCTCTACCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
3UTR-3UTR CCA 90 bp CAGCCTCCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCCTCCAGCACCCCGTCACTCAGCCACACTaGCTCGGCCCAGCGCCTTCC +
Preference number: 2 (lower is better)
Translates to: QPPRHGLRFVAVHVLQHPVTQPH*LGPAPS
Trigger: GGAAGGCGCTGGGCCGAGCCAGTGTGGCTGAGTGAC...GGGGTGCTGGAGGACATGGACAGCGACAAACCTGAGGCCGTGTCTAGGAGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
3UTR-3UTR CCA 90 bp TCGTGCCAGCCTCCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCCTCCAGGTGCAGCCTGGTGCATaGTCCGGGGCTTGGCCTCCC +
Preference number: 2 (lower is better)
Translates to: SCQPPRHGLRFVAVHVLQVQPGA*SGAWPP
Trigger: GGGAGGCCAAGCCCCGGACCATGCACCAGGCTGCAC...CTGGAGGACATGGACAGCGACAAACCTGAGGCCGTGTCTAGGAGGCTGGCACGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
3UTR-3UTR CCA 90 bp CAGCCTCCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCCTCCAGCACCCCCACCAGGGTGCAGCCTaGTGCATGGTCCGGGGCTTG +
Preference number: 2 (lower is better)
Translates to: QPPRHGLRFVAVHVLQHPHQGAA*CMVRGL
Trigger: CAAGCCCCGGACCATGCACCAGGCTGCACCCTGGTG...GGGGTGCTGGAGGACATGGACAGCGACAAACCTGAGGCCGTGTCTAGGAGGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
3UTR-3UTR CCA 90 bp CAGCCTCCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCCTCCAGCACCCCTGGGAGGCCTGCGGGTaGAAGACACCAGGGTGCAGC +
Preference number: 2 (lower is better)
Translates to: QPPRHGLRFVAVHVLQHPWEACG*KTPGCS
Trigger: GCTGCACCCTGGTGTCTTCCACCCGCAGGCCTCCCA...GGGGTGCTGGAGGACATGGACAGCGACAAACCTGAGGCCGTGTCTAGGAGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
3UTR-3UTR CCA 90 bp CAGCCTCCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCCTCCAGCACCCCAGCGGCCGCAAGTGCTaGGGGAGGCTGCTTGGAGCA +
Preference number: 2 (lower is better)
Translates to: QPPRHGLRFVAVHVLQHPSGRKC*GRLLGA
Trigger: TGCTCCAAGCAGCCTCCCCCAGCACTTGCGGCCGCT...GGGGTGCTGGAGGACATGGACAGCGACAAACCTGAGGCCGTGTCTAGGAGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
3UTR-3UTR TCA 90 bp GGGGCTGTGGTACATGCAGAGGCGGCGGCTGTCCCAGCAGCCTGGCCAGGAGATGAGAAGGCACGTGTTTaGGTTGGCATCACTGTCCCC +
Preference number: 2 (lower is better)
Translates to: GAVVHAEAAAVPAAWPGDEKARV*VGITVP
Trigger: GGGGACAGTGATGCCAACTCAAACACGTGCCTTCTC...ATCTCCTGGCCAGGCTGCTGGGACAGCCGCCGCCTCTGCATGTACCACAGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
3UTR-3UTR TCA 90 bp TCGTGCCAGCCTCCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCCTCCAGTCTTGGTTGGAGGGCTaGGCGGCCGCAAGTGCTGGG +
Preference number: 2 (lower is better)
Translates to: SCQPPRHGLRFVAVHVLQSWLEG*AAASAG
Trigger: CCCAGCACTTGCGGCCGCTCAGCCCTCCAACCAAGA...CTGGAGGACATGGACAGCGACAAACCTGAGGCCGTGTCTAGGAGGCTGGCACGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
3UTR-3UTR GCA 90 bp AAGCAGTCGTGCCAGCCTCCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCGGGGGCTGTGGTACATaGAGAGGCGGCGGCTGTCCC +
Preference number: 2 (lower is better)
Translates to: KQSCQPPRHGLRFVAVHVGGCGT*RGGGCP
Trigger: GGGACAGCCGCCGCCTCTGCATGTACCACAGCCCCC...GACATGGACAGCGACAAACCTGAGGCCGTGTCTAGGAGGCTGGCACGACTGCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
3UTR-3UTR CCA 90 bp CCTGGCCAGGAGATACCGTGGAGAAGGCACGTGTTTGAGTTGGCATCACTGTCCCCTTCCCGAGGTCTGTaGGGGTCCGGGCGGAGGTGG +
Preference number: 2 (lower is better)
Translates to: PGQEIPWRRHVFELASLSPSRGL*GSGRRW
Trigger: CCACCTCCGCCCGGACCCCCACAGACCTCGGGAAGG...GGACAGTGATGCCAACTCAAACACGTGCCTTCTCCACGGTATCTCCTGGCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
3UTR-3UTR CCA 90 bp GGGGAGGCTGCTTGGAGCATGGGAGGCCTGCGGGTGGAAGACACCAGGGTGCAGGTACTCCAGATGCAGTaGGTGACACCCTGGTCACTC +
Preference number: 2 (lower is better)
Translates to: GEAAWSMGGLRVEDTRVQVLQMQ*VTPWSL
Trigger: GAGTGACCAGGGTGTCACCCACTGCATCTGGAGTAC...CTGCACCCTGGTGTCTTCCACCCGCAGGCCTCCCATGCTCCAAGCAGCCTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
3UTR-3UTR CCA 90 bp AAGCAGTCGTGCCAGCCTCCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCGCATGGTCCGGGGCTTaGCCTCCCTATGGGGCGTGG +
Preference number: 2 (lower is better)
Translates to: KQSCQPPRHGLRFVAVHVAWSGA*PPYGAW
Trigger: CCACGCCCCATAGGGAGGCCAAGCCCCGGACCATGC...GACATGGACAGCGACAAACCTGAGGCCGTGTCTAGGAGGCTGGCACGACTGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
3UTR-3UTR CCA 90 bp AAGCAGTCGTGCCAGCCTCCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCGTGCAGCCTGGTGCATaGTCCGGGGCTTGGCCTCCC +
Preference number: 2 (lower is better)
Translates to: KQSCQPPRHGLRFVAVHVVQPGA*SGAWPP
Trigger: GGGAGGCCAAGCCCCGGACCATGCACCAGGCTGCAC...GACATGGACAGCGACAAACCTGAGGCCGTGTCTAGGAGGCTGGCACGACTGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
3UTR-3UTR CCA 90 bp TCGTGCCAGCCTCCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCCTCCAGTGGGAGGCCTGCGGGTaGAAGACACCAGGGTGCAGC +
Preference number: 2 (lower is better)
Translates to: SCQPPRHGLRFVAVHVLQWEACG*KTPGCS
Trigger: GCTGCACCCTGGTGTCTTCCACCCGCAGGCCTCCCA...CTGGAGGACATGGACAGCGACAAACCTGAGGCCGTGTCTAGGAGGCTGGCACGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
3UTR-3UTR TCA 90 bp CAGCCTCCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCCTCCAGCACCCCTCCAGATGCAGTGGGTaGCACCCTGGTCACTCAGCC +
Preference number: 2 (lower is better)
Translates to: QPPRHGLRFVAVHVLQHPSRCSG*HPGHSA
Trigger: GGCTGAGTGACCAGGGTGTCACCCACTGCATCTGGA...GGGGTGCTGGAGGACATGGACAGCGACAAACCTGAGGCCGTGTCTAGGAGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
3UTR-3UTR GCA 90 bp ACTGTATTTATTAAAACAGGCAAGGGGCTGGGCTGCGGCAGGGCCCAGGTGCCTGGGGGCTGTGGTACATaGAGAGGCGGCGGCTGTCCC +
Preference number: 2 (lower is better)
Translates to: TVFIKTGKGLGCGRAQVPGGCGT*RGGGCP
Trigger: GGGACAGCCGCCGCCTCTGCATGTACCACAGCCCCC...AGGCACCTGGGCCCTGCCGCAGCCCAGCCCCTTGCCTGTTTTAATAAATACAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000671997.1
ENST00000672944.1
3UTR-3UTR CCA 90 bp CGGGTAGAGCCGCCTGTCCTAGGAGAAGCTGTACTCCAGATGCAGTGGGTGACAGTCACTCAGCCACACTaGCTCGGCCCAGCGCCTTCC +
Preference number: 2 (lower is better)
Translates to: RVEPPVLGEAVLQMQWVTVTQPH*LGPAPS
Trigger: GGAAGGCGCTGGGCCGAGCCAGTGTGGCTGAGTGAC...TGTCACCCACTGCATCTGGAGTACAGCTTCTCCTAGGACAGGCGGCTCTACCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
3UTR-3UTR CCA 90 bp AAGCAGTCGTGCCAGCCTCCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCGTCACTCAGCCACACTaGCTCGGCCCAGCGCCTTCC +
Preference number: 2 (lower is better)
Translates to: KQSCQPPRHGLRFVAVHVVTQPH*LGPAPS
Trigger: GGAAGGCGCTGGGCCGAGCCAGTGTGGCTGAGTGAC...GACATGGACAGCGACAAACCTGAGGCCGTGTCTAGGAGGCTGGCACGACTGCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
3UTR-3UTR CCA 90 bp AAGCAGTCGTGCCAGCCTCCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCCACCAGGGTGCAGCCTaGTGCATGGTCCGGGGCTTG +
Preference number: 2 (lower is better)
Translates to: KQSCQPPRHGLRFVAVHVHQGAA*CMVRGL
Trigger: CAAGCCCCGGACCATGCACCAGGCTGCACCCTGGTG...GACATGGACAGCGACAAACCTGAGGCCGTGTCTAGGAGGCTGGCACGACTGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
3UTR-3UTR CCA 90 bp CCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCCTCCAGCACCCCTCTTACTGGGAGGCCTGCGGGTaGAAGACACCAGGGTGCAGC +
Preference number: 2 (lower is better)
Translates to: PRHGLRFVAVHVLQHPSYWEACG*KTPGCS
Trigger: GCTGCACCCTGGTGTCTTCCACCCGCAGGCCTCCCA...GTAAGAGGGGTGCTGGAGGACATGGACAGCGACAAACCTGAGGCCGTGTCTAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
3UTR-3UTR CCA 90 bp AAGCAGTCGTGCCAGCCTCCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCAGCGGCCGCAAGTGCTaGGGGAGGCTGCTTGGAGCA +
Preference number: 2 (lower is better)
Translates to: KQSCQPPRHGLRFVAVHVSGRKC*GRLLGA
Trigger: TGCTCCAAGCAGCCTCCCCCAGCACTTGCGGCCGCT...GACATGGACAGCGACAAACCTGAGGCCGTGTCTAGGAGGCTGGCACGACTGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
3UTR-3UTR GCA 90 bp CCTGGCCAGGAGATACCGTGGAGAAGGCACGTGTTTGAGTTGGCATCACTGTCCCTGTCCTGCTGTGTCTaGCGGGCACACCCCGGTCAC +
Preference number: 2 (lower is better)
Translates to: PGQEIPWRRHVFELASLSLSCCV*RAHPGH
Trigger: GTGACCGGGGTGTGCCCGGCAGACACAGCAGGACAG...GGACAGTGATGCCAACTCAAACACGTGCCTTCTCCACGGTATCTCCTGGCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
3UTR-3UTR GCA 90 bp ACTGTATTTATTAAAACAGGCAAGGGGCTGGGCTGCGGCAGGGCCCAGGTGCCTCTGAGCGGCCGCAAGTaGTGGGGGAGGCTGCTTGGA +
Preference number: 2 (lower is better)
Translates to: TVFIKTGKGLGCGRAQVPLSGRK*WGRLLG
Trigger: TCCAAGCAGCCTCCCCCAGCACTTGCGGCCGCTCAG...AGGCACCTGGGCCCTGCCGCAGCCCAGCCCCTTGCCTGTTTTAATAAATACAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000671997.1
ENST00000672944.1
3UTR-3UTR CCA 90 bp GTCCTCCAGCACCCCTCTTACCAGACCACAAGGAGCTGCATTATGATGTGTGACCCTTCCCGAGGTCTGTaGGGGTCCGGGCGGAGGTGG +
Preference number: 2 (lower is better)
Translates to: VLQHPSYQTTRSCIMMCDPSRGL*GSGRRW
Trigger: CCACCTCCGCCCGGACCCCCACAGACCTCGGGAAGG...GTCACACATCATAATGCAGCTCCTTGTGGTCTGGTAAGAGGGGTGCTGGAGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
3UTR-3UTR CCA 90 bp ACTGTATTTATTAAAACAGGCAAGGGGCTGGGCTGCGGCAGGGCCCAGGTGCCTCACCAGGGTGCAGCCTaGTGCATGGTCCGGGGCTTG +
Preference number: 2 (lower is better)
Translates to: TVFIKTGKGLGCGRAQVPHQGAA*CMVRGL
Trigger: CAAGCCCCGGACCATGCACCAGGCTGCACCCTGGTG...AGGCACCTGGGCCCTGCCGCAGCCCAGCCCCTTGCCTGTTTTAATAAATACAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000671997.1
ENST00000672944.1
3UTR-3UTR CCA 90 bp CCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCCTCCAGCACCCCTCTTACAGGCTGCTTGGAGCATaGGAGGCCTGCGGGTGGAAG +
Preference number: 2 (lower is better)
Translates to: PRHGLRFVAVHVLQHPSYRLLGA*EACGWK
Trigger: CTTCCACCCGCAGGCCTCCCATGCTCCAAGCAGCCT...GTAAGAGGGGTGCTGGAGGACATGGACAGCGACAAACCTGAGGCCGTGTCTAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
3UTR-3UTR CCA 90 bp CAGCCTCCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCCTCCAGCACCCCGACTTAGGTCTTGGTTaGAGGGCTGAGCGGCCGCAA +
Preference number: 2 (lower is better)
Translates to: QPPRHGLRFVAVHVLQHPDLGLG*RAERPQ
Trigger: TTGCGGCCGCTCAGCCCTCCAACCAAGACCTAAGTC...GGGGTGCTGGAGGACATGGACAGCGACAAACCTGAGGCCGTGTCTAGGAGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
3UTR-3UTR GCA 90 bp CCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCCTCCAGCACCCCTCTTACCATAGAGCCCTGTCCTaGTGTGTCTGCCGGGCACAC +
Preference number: 2 (lower is better)
Translates to: PRHGLRFVAVHVLQHPSYHRALS*CVCRAH
Trigger: GTGTGCCCGGCAGACACAGCAGGACAGGGCTCTATG...GTAAGAGGGGTGCTGGAGGACATGGACAGCGACAAACCTGAGGCCGTGTCTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
3UTR-3UTR GCA 90 bp AGAGCCGCCTGTCCTAGGAGAAGCTGTACTCCAGATGCAGTGGGTGACACCCTGCATAGAGCCCTGTCCTaGTGTGTCTGCCGGGCACAC +
Preference number: 2 (lower is better)
Translates to: RAACPRRSCTPDAVGDTLHRALS*CVCRAH
Trigger: GTGTGCCCGGCAGACACAGCAGGACAGGGCTCTATG...CAGGGTGTCACCCACTGCATCTGGAGTACAGCTTCTCCTAGGACAGGCGGCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
3UTR-3UTR GCA 90 bp GTCCTCCAGCACCCCTCTTACCAGACCACAAGGAGCTGCATTATGATGTGTGACCTGTCCTGCTGTGTCTaGCGGGCACACCCCGGTCAC +
Preference number: 2 (lower is better)
Translates to: VLQHPSYQTTRSCIMMCDLSCCV*RAHPGH
Trigger: GTGACCGGGGTGTGCCCGGCAGACACAGCAGGACAG...GTCACACATCATAATGCAGCTCCTTGTGGTCTGGTAAGAGGGGTGCTGGAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
3UTR-3UTR GCA 90 bp CCTGGCCAGGAGATACCGTGGAGAAGGCACGTGTTTGAGTTGGCATCACTGTCCCATAGAGCCCTGTCCTaGTGTGTCTGCCGGGCACAC +
Preference number: 2 (lower is better)
Translates to: PGQEIPWRRHVFELASLSHRALS*CVCRAH
Trigger: GTGTGCCCGGCAGACACAGCAGGACAGGGCTCTATG...GGACAGTGATGCCAACTCAAACACGTGCCTTCTCCACGGTATCTCCTGGCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
3UTR-3UTR GCA 90 bp GTCCTCCAGCACCCCTCTTACCAGACCACAAGGAGCTGCATTATGATGTGTGACCTGAGCGGCCGCAAGTaGTGGGGGAGGCTGCTTGGA +
Preference number: 2 (lower is better)
Translates to: VLQHPSYQTTRSCIMMCDLSGRK*WGRLLG
Trigger: TCCAAGCAGCCTCCCCCAGCACTTGCGGCCGCTCAG...GTCACACATCATAATGCAGCTCCTTGTGGTCTGGTAAGAGGGGTGCTGGAGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
3UTR-3UTR CCA 90 bp CCAGGAAGACACACACAGTGCTGCTGCCTAATCCTCTCTTTATTTGGTCTCTGCCCTTCCCGAGGTCTGTaGGGGTCCGGGCGGAGGTGG +
Preference number: 2 (lower is better)
Translates to: PGRHTQCCCLILSLFGLCPSRGL*GSGRRW
Trigger: CCACCTCCGCCCGGACCCCCACAGACCTCGGGAAGG...GCAGAGACCAAATAAAGAGAGGATTAGGCAGCAGCACTGTGTGTGTCTTCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000671997.1
ENST00000672944.1
3UTR-3UTR CCA 90 bp ACCACAAGGAGCTGCATTATGATGTGTGACTTAGGTCTTGGTTGGAGGGCTGAGCCTTCCCGAGGTCTGTaGGGGTCCGGGCGGAGGTGG +
Preference number: 2 (lower is better)
Translates to: TTRSCIMMCDLGLGWRAEPSRGL*GSGRRW
Trigger: CCACCTCCGCCCGGACCCCCACAGACCTCGGGAAGG...CTCAGCCCTCCAACCAAGACCTAAGTCACACATCATAATGCAGCTCCTTGTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
3UTR-3UTR CCA 90 bp ACTGTATTTATTAAAACAGGCAAGGGGCTGGGCTGCGGCAGGGCCCAGGTGCCTCAGCCTCTGCTGTCCTaGCCGCACATAGAGCCCTGT +
Preference number: 2 (lower is better)
Translates to: TVFIKTGKGLGCGRAQVPQPLLS*PHIEPC
Trigger: ACAGGGCTCTATGTGCGGCCAGGACAGCAGAGGCTG...AGGCACCTGGGCCCTGCCGCAGCCCAGCCCCTTGCCTGTTTTAATAAATACAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000671997.1
ENST00000672944.1
3UTR-3UTR CCA 90 bp AAACTGTATTTATTAAAACAGGCAAGGGGCTGGGCTGCGGCAGGGCCCAGGTGCCAGTGGGTGACACCCTaGTCACTCAGCCACACCCCG +
Preference number: 2 (lower is better)
Translates to: KLYLLKQARGWAAAGPRCQWVTP*SLSHTP
Trigger: CGGGGTGTGGCTGAGTGACCAGGGTGTCACCCACTG...GCACCTGGGCCCTGCCGCAGCCCAGCCCCTTGCCTGTTTTAATAAATACAGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000671997.1
ENST00000672944.1
3UTR-3UTR CCA 90 bp TCGTGCCAGCCTCCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCCTCCAGGGCACGTGTTTGAGTTaGCATCACTGTCCCCAGACG +
Preference number: 2 (lower is better)
Translates to: SCQPPRHGLRFVAVHVLQGTCLS*HHCPQT
Trigger: CGTCTGGGGACAGTGATGCCAACTCAAACACGTGCC...CTGGAGGACATGGACAGCGACAAACCTGAGGCCGTGTCTAGGAGGCTGGCACGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
3UTR-3UTR CCA 90 bp TCGTGCCAGCCTCCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCCTCCAGGGCCAGGAGATACCGTaGAGAAGGCACGTGTTTGAG +
Preference number: 2 (lower is better)
Translates to: SCQPPRHGLRFVAVHVLQGQEIP*RRHVFE
Trigger: CTCAAACACGTGCCTTCTCCACGGTATCTCCTGGCC...CTGGAGGACATGGACAGCGACAAACCTGAGGCCGTGTCTAGGAGGCTGGCACGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
3UTR-3UTR CCA 90 bp AAACTGTATTTATTAAAACAGGCAAGGGGCTGGGCTGCGGCAGGGCCCAGGTGCGCTGTCCCAGCAGCCTaGCCAGGAGATACCGTGGAG +
Preference number: 2 (lower is better)
Translates to: KLYLLKQARGWAAAGPRCAVPAA*PGDTVE
Trigger: CTCCACGGTATCTCCTGGCCAGGCTGCTGGGACAGC...GCACCTGGGCCCTGCCGCAGCCCAGCCCCTTGCCTGTTTTAATAAATACAGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000671997.1
ENST00000672944.1
3UTR-3UTR CCA 90 bp GTCCTCCAGCACCCCTCTTACCAGACCACAAGGAGCTGCATTATGATGTGTGACCACCAGGGTGCAGCCTaGTGCATGGTCCGGGGCTTG +
Preference number: 2 (lower is better)
Translates to: VLQHPSYQTTRSCIMMCDHQGAA*CMVRGL
Trigger: CAAGCCCCGGACCATGCACCAGGCTGCACCCTGGTG...GTCACACATCATAATGCAGCTCCTTGTGGTCTGGTAAGAGGGGTGCTGGAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
3UTR-3UTR CCA 90 bp CCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCCTCCAGCACCCCTCTTACGACTTAGGTCTTGGTTaGAGGGCTGAGCGGCCGCAA +
Preference number: 2 (lower is better)
Translates to: PRHGLRFVAVHVLQHPSYDLGLG*RAERPQ
Trigger: TTGCGGCCGCTCAGCCCTCCAACCAAGACCTAAGTC...GTAAGAGGGGTGCTGGAGGACATGGACAGCGACAAACCTGAGGCCGTGTCTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
3UTR-3UTR TCA 90 bp AAACTGTATTTATTAAAACAGGCAAGGGGCTGGGCTGCGGCAGGGCCCAGGTGCTCCAGATGCAGTGGGTaGCACCCTGGTCACTCAGCC +
Preference number: 2 (lower is better)
Translates to: KLYLLKQARGWAAAGPRCSRCSG*HPGHSA
Trigger: GGCTGAGTGACCAGGGTGTCACCCACTGCATCTGGA...GCACCTGGGCCCTGCCGCAGCCCAGCCCCTTGCCTGTTTTAATAAATACAGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000671997.1
ENST00000672944.1
3UTR-3UTR GCA 90 bp CCAGGAAGACACACACAGTGCTGCTGCCTAATCCTCTCTTTATTTGGTCTCTGCGGGGGCTGTGGTACATaGAGAGGCGGCGGCTGTCCC +
Preference number: 2 (lower is better)
Translates to: PGRHTQCCCLILSLFGLCGGCGT*RGGGCP
Trigger: GGGACAGCCGCCGCCTCTGCATGTACCACAGCCCCC...GCAGAGACCAAATAAAGAGAGGATTAGGCAGCAGCACTGTGTGTGTCTTCCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000671997.1
ENST00000672944.1
3UTR-3UTR CCA 90 bp AAACTGTATTTATTAAAACAGGCAAGGGGCTGGGCTGCGGCAGGGCCCAGGTGCCAGCCTCTGCTGTCCTaGCCGCACATAGAGCCCTGT +
Preference number: 2 (lower is better)
Translates to: KLYLLKQARGWAAAGPRCQPLLS*PHIEPC
Trigger: ACAGGGCTCTATGTGCGGCCAGGACAGCAGAGGCTG...GCACCTGGGCCCTGCCGCAGCCCAGCCCCTTGCCTGTTTTAATAAATACAGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000671997.1
ENST00000672944.1
3UTR-3UTR CCA 90 bp AAGCAGTCGTGCCAGCCTCCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCGTACTCCAGATGCAGTaGGTGACACCCTGGTCACTC +
Preference number: 2 (lower is better)
Translates to: KQSCQPPRHGLRFVAVHVVLQMQ*VTPWSL
Trigger: GAGTGACCAGGGTGTCACCCACTGCATCTGGAGTAC...GACATGGACAGCGACAAACCTGAGGCCGTGTCTAGGAGGCTGGCACGACTGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
3UTR-3UTR CCA 90 bp CCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCCTCCAGCACCCCTCTTACGGCACGTGTTTGAGTTaGCATCACTGTCCCCAGACG +
Preference number: 2 (lower is better)
Translates to: PRHGLRFVAVHVLQHPSYGTCLS*HHCPQT
Trigger: CGTCTGGGGACAGTGATGCCAACTCAAACACGTGCC...GTAAGAGGGGTGCTGGAGGACATGGACAGCGACAAACCTGAGGCCGTGTCTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
3UTR-3UTR CCA 90 bp AAGCAGTCGTGCCAGCCTCCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCGGCCAGGAGATACCGTaGAGAAGGCACGTGTTTGAG +
Preference number: 2 (lower is better)
Translates to: KQSCQPPRHGLRFVAVHVGQEIP*RRHVFE
Trigger: CTCAAACACGTGCCTTCTCCACGGTATCTCCTGGCC...GACATGGACAGCGACAAACCTGAGGCCGTGTCTAGGAGGCTGGCACGACTGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
3UTR-3UTR CCA 90 bp GTCCTCCAGCACCCCTCTTACCAGACCACAAGGAGCTGCATTATGATGTGTGACCCTCCCTATGGGGCGTaGGGGGCTGTGGTACATGCA +
Preference number: 2 (lower is better)
Translates to: VLQHPSYQTTRSCIMMCDPPYGA*GAVVHA
Trigger: TGCATGTACCACAGCCCCCCACGCCCCATAGGGAGG...GTCACACATCATAATGCAGCTCCTTGTGGTCTGGTAAGAGGGGTGCTGGAGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
3UTR-3UTR CCA 90 bp GTCCTCCAGCACCCCTCTTACCAGACCACAAGGAGCTGCATTATGATGTGTGACAGGCTGCTTGGAGCATaGGAGGCCTGCGGGTGGAAG +
Preference number: 2 (lower is better)
Translates to: VLQHPSYQTTRSCIMMCDRLLGA*EACGWK
Trigger: CTTCCACCCGCAGGCCTCCCATGCTCCAAGCAGCCT...GTCACACATCATAATGCAGCTCCTTGTGGTCTGGTAAGAGGGGTGCTGGAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
3UTR-3UTR GCA 90 bp GTCCTCCAGCACCCCTCTTACCAGACCACAAGGAGCTGCATTATGATGTGTGACTGGAAGACACCAGGGTaGAGCCTGGTGCATGGTCCG +
Preference number: 2 (lower is better)
Translates to: VLQHPSYQTTRSCIMMCDWKTPG*SLVHGP
Trigger: CGGACCATGCACCAGGCTGCACCCTGGTGTCTTCCA...GTCACACATCATAATGCAGCTCCTTGTGGTCTGGTAAGAGGGGTGCTGGAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
3UTR-3UTR CCA 90 bp CCAGGAAGACACACACAGTGCTGCTGCCTAATCCTCTCTTTATTTGGTCTCTGCGTCACTCAGCCACACTaGCTCGGCCCAGCGCCTTCC +
Preference number: 2 (lower is better)
Translates to: PGRHTQCCCLILSLFGLCVTQPH*LGPAPS
Trigger: GGAAGGCGCTGGGCCGAGCCAGTGTGGCTGAGTGAC...GCAGAGACCAAATAAAGAGAGGATTAGGCAGCAGCACTGTGTGTGTCTTCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000671997.1
ENST00000672944.1
3UTR-3UTR CCA 90 bp GTCCTCCAGCACCCCTCTTACCAGACCACAAGGAGCTGCATTATGATGTGTGACCAGCCTCTGCTGTCCTaGCCGCACATAGAGCCCTGT +
Preference number: 2 (lower is better)
Translates to: VLQHPSYQTTRSCIMMCDQPLLS*PHIEPC
Trigger: ACAGGGCTCTATGTGCGGCCAGGACAGCAGAGGCTG...GTCACACATCATAATGCAGCTCCTTGTGGTCTGGTAAGAGGGGTGCTGGAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
3UTR-3UTR CCA 90 bp ACTGTATTTATTAAAACAGGCAAGGGGCTGGGCTGCGGCAGGGCCCAGGTGCCTGTACTCCAGATGCAGTaGGTGACACCCTGGTCACTC +
Preference number: 2 (lower is better)
Translates to: TVFIKTGKGLGCGRAQVPVLQMQ*VTPWSL
Trigger: GAGTGACCAGGGTGTCACCCACTGCATCTGGAGTAC...AGGCACCTGGGCCCTGCCGCAGCCCAGCCCCTTGCCTGTTTTAATAAATACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000671997.1
ENST00000672944.1
3UTR-3UTR CCA 90 bp CCTGGCCAGGAGATACCGTGGAGAAGGCACGTGTTTGAGTTGGCATCACTGTCCGTACTCCAGATGCAGTaGGTGACACCCTGGTCACTC +
Preference number: 2 (lower is better)
Translates to: PGQEIPWRRHVFELASLSVLQMQ*VTPWSL
Trigger: GAGTGACCAGGGTGTCACCCACTGCATCTGGAGTAC...GGACAGTGATGCCAACTCAAACACGTGCCTTCTCCACGGTATCTCCTGGCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
3UTR-3UTR CCA 90 bp ACTGTATTTATTAAAACAGGCAAGGGGCTGGGCTGCGGCAGGGCCCAGGTGCCTGGCCAGGAGATACCGTaGAGAAGGCACGTGTTTGAG +
Preference number: 2 (lower is better)
Translates to: TVFIKTGKGLGCGRAQVPGQEIP*RRHVFE
Trigger: CTCAAACACGTGCCTTCTCCACGGTATCTCCTGGCC...AGGCACCTGGGCCCTGCCGCAGCCCAGCCCCTTGCCTGTTTTAATAAATACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000671997.1
ENST00000672944.1
3UTR-3UTR CCA 90 bp CCAGGAAGACACACACAGTGCTGCTGCCTAATCCTCTCTTTATTTGGTCTCTGCTGGGAGGCCTGCGGGTaGAAGACACCAGGGTGCAGC +
Preference number: 2 (lower is better)
Translates to: PGRHTQCCCLILSLFGLCWEACG*KTPGCS
Trigger: GCTGCACCCTGGTGTCTTCCACCCGCAGGCCTCCCA...GCAGAGACCAAATAAAGAGAGGATTAGGCAGCAGCACTGTGTGTGTCTTCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000671997.1
ENST00000672944.1
3UTR-3UTR CCA 90 bp AAACTGTATTTATTAAAACAGGCAAGGGGCTGGGCTGCGGCAGGGCCCAGGTGCGTACTCCAGATGCAGTaGGTGACACCCTGGTCACTC +
Preference number: 2 (lower is better)
Translates to: KLYLLKQARGWAAAGPRCVLQMQ*VTPWSL
Trigger: GAGTGACCAGGGTGTCACCCACTGCATCTGGAGTAC...GCACCTGGGCCCTGCCGCAGCCCAGCCCCTTGCCTGTTTTAATAAATACAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000671997.1
ENST00000672944.1
3UTR-3UTR CCA 90 bp CCAGGAAGACACACACAGTGCTGCTGCCTAATCCTCTCTTTATTTGGTCTCTGCGCTGTCCCAGCAGCCTaGCCAGGAGATACCGTGGAG +
Preference number: 2 (lower is better)
Translates to: PGRHTQCCCLILSLFGLCAVPAA*PGDTVE
Trigger: CTCCACGGTATCTCCTGGCCAGGCTGCTGGGACAGC...GCAGAGACCAAATAAAGAGAGGATTAGGCAGCAGCACTGTGTGTGTCTTCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000671997.1
ENST00000672944.1
3UTR-3UTR TCA 90 bp ACCACAAGGAGCTGCATTATGATGTGTGACTTAGGTCTTGGTTGGAGGGCTGAGTCCAGATGCAGTGGGTaGCACCCTGGTCACTCAGCC +
Preference number: 2 (lower is better)
Translates to: TTRSCIMMCDLGLGWRAESRCSG*HPGHSA
Trigger: GGCTGAGTGACCAGGGTGTCACCCACTGCATCTGGA...CTCAGCCCTCCAACCAAGACCTAAGTCACACATCATAATGCAGCTCCTTGTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
3UTR-3UTR TCA 90 bp GTCCTCCAGCACCCCTCTTACCAGACCACAAGGAGCTGCATTATGATGTGTGACGAGAAGGCACGTGTTTaGGTTGGCATCACTGTCCCC +
Preference number: 2 (lower is better)
Translates to: VLQHPSYQTTRSCIMMCDEKARV*VGITVP
Trigger: GGGGACAGTGATGCCAACTCAAACACGTGCCTTCTC...GTCACACATCATAATGCAGCTCCTTGTGGTCTGGTAAGAGGGGTGCTGGAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
3UTR-3UTR TCA 90 bp TCGTGCCAGCCTCCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCCTCCAGCTGCATTATGATGTGTaGCTTAGGTCTTGGTTGGAG +
Preference number: 2 (lower is better)
Translates to: SCQPPRHGLRFVAVHVLQLHYDV*LRSWLE
Trigger: CTCCAACCAAGACCTAAGTCACACATCATAATGCAG...CTGGAGGACATGGACAGCGACAAACCTGAGGCCGTGTCTAGGAGGCTGGCACGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
3UTR-3UTR TCA 90 bp AAACTGTATTTATTAAAACAGGCAAGGGGCTGGGCTGCGGCAGGGCCCAGGTGCTTATTTGGTCTCTGCTaGAGCAGTCGTGCCAGCCTC +
Preference number: 2 (lower is better)
Translates to: KLYLLKQARGWAAAGPRCLFGLC*SSRASL
Trigger: GAGGCTGGCACGACTGCTTCAGCAGAGACCAAATAA...GCACCTGGGCCCTGCCGCAGCCCAGCCCCTTGCCTGTTTTAATAAATACAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000671997.1
ENST00000672944.1
3UTR-3UTR GCA 90 bp CAGCCTCCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCCTCCAGCACCCCCAGACCACAAGGAGCTaGATTATGATGTGTGACTTA +
Preference number: 2 (lower is better)
Translates to: QPPRHGLRFVAVHVLQHPQTTRS*IMMCDL
Trigger: TAAGTCACACATCATAATGCAGCTCCTTGTGGTCTG...GGGGTGCTGGAGGACATGGACAGCGACAAACCTGAGGCCGTGTCTAGGAGGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
3UTR-3UTR CCA 90 bp ACCACAAGGAGCTGCATTATGATGTGTGACTTAGGTCTTGGTTGGAGGGCTGAGCAGCCTCTGCTGTCCTaGCCGCACATAGAGCCCTGT +
Preference number: 2 (lower is better)
Translates to: TTRSCIMMCDLGLGWRAEQPLLS*PHIEPC
Trigger: ACAGGGCTCTATGTGCGGCCAGGACAGCAGAGGCTG...CTCAGCCCTCCAACCAAGACCTAAGTCACACATCATAATGCAGCTCCTTGTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
3UTR-3UTR CCA 90 bp AGGAAGACACACACAGTGCTGCTGCCTAATCCTCTCTTTATTTGGTCTCTGCTGCAGTGGGTGACACCCTaGTCACTCAGCCACACCCCG +
Preference number: 2 (lower is better)
Translates to: RKTHTVLLPNPLFIWSLLQWVTP*SLSHTP
Trigger: CGGGGTGTGGCTGAGTGACCAGGGTGTCACCCACTG...CAGCAGAGACCAAATAAAGAGAGGATTAGGCAGCAGCACTGTGTGTGTCTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000671997.1
ENST00000672944.1
3UTR-3UTR CCA 90 bp GTCCTCCAGCACCCCTCTTACCAGACCACAAGGAGCTGCATTATGATGTGTGACGGCCAGGAGATACCGTaGAGAAGGCACGTGTTTGAG +
Preference number: 2 (lower is better)
Translates to: VLQHPSYQTTRSCIMMCDGQEIP*RRHVFE
Trigger: CTCAAACACGTGCCTTCTCCACGGTATCTCCTGGCC...GTCACACATCATAATGCAGCTCCTTGTGGTCTGGTAAGAGGGGTGCTGGAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
3UTR-3UTR GCA 90 bp AGGAAGACACACACAGTGCTGCTGCCTAATCCTCTCTTTATTTGGTCTCTGCTGCATAGAGCCCTGTCCTaGTGTGTCTGCCGGGCACAC +
Preference number: 2 (lower is better)
Translates to: RKTHTVLLPNPLFIWSLLHRALS*CVCRAH
Trigger: GTGTGCCCGGCAGACACAGCAGGACAGGGCTCTATG...CAGCAGAGACCAAATAAAGAGAGGATTAGGCAGCAGCACTGTGTGTGTCTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000671997.1
ENST00000672944.1
3UTR-3UTR GCA 90 bp AAGCAGTCGTGCCAGCCTCCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCCAGACCACAAGGAGCTaGATTATGATGTGTGACTTA +
Preference number: 2 (lower is better)
Translates to: KQSCQPPRHGLRFVAVHVQTTRS*IMMCDL
Trigger: TAAGTCACACATCATAATGCAGCTCCTTGTGGTCTG...GACATGGACAGCGACAAACCTGAGGCCGTGTCTAGGAGGCTGGCACGACTGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
3UTR-3UTR CCA 90 bp ACCACAAGGAGCTGCATTATGATGTGTGACTTAGGTCTTGGTTGGAGGGCTGAGGTACTCCAGATGCAGTaGGTGACACCCTGGTCACTC +
Preference number: 2 (lower is better)
Translates to: TTRSCIMMCDLGLGWRAEVLQMQ*VTPWSL
Trigger: GAGTGACCAGGGTGTCACCCACTGCATCTGGAGTAC...CTCAGCCCTCCAACCAAGACCTAAGTCACACATCATAATGCAGCTCCTTGTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
3UTR-3UTR CCA 90 bp ACCACAAGGAGCTGCATTATGATGTGTGACTTAGGTCTTGGTTGGAGGGCTGAGGGCACGTGTTTGAGTTaGCATCACTGTCCCCAGACG +
Preference number: 2 (lower is better)
Translates to: TTRSCIMMCDLGLGWRAEGTCLS*HHCPQT
Trigger: CGTCTGGGGACAGTGATGCCAACTCAAACACGTGCC...CTCAGCCCTCCAACCAAGACCTAAGTCACACATCATAATGCAGCTCCTTGTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
3UTR-3UTR CCA 90 bp AGGAAGACACACACAGTGCTGCTGCCTAATCCTCTCTTTATTTGGTCTCTGCTGGACTTAGGTCTTGGTTaGAGGGCTGAGCGGCCGCAA +
Preference number: 2 (lower is better)
Translates to: RKTHTVLLPNPLFIWSLLDLGLG*RAERPQ
Trigger: TTGCGGCCGCTCAGCCCTCCAACCAAGACCTAAGTC...CAGCAGAGACCAAATAAAGAGAGGATTAGGCAGCAGCACTGTGTGTGTCTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000671997.1
ENST00000672944.1
3UTR CCA 72 bp GTGTCTGCCGGGCACACCCCGGTCACTCAGCCACACTaGCTCGGCCCAGCGCCTTCCCGAGGTCTGTGGGGG +
Preference number: 3 (lower is better)
Translates to: VSAGHTPVTQPH*LGPAPSRGLWG
Trigger: CCCCCACAGACCTCGGGAAGGCGCTGGGCCGAGCCAGTGTGGCTGAGTGACCGGGGTGTGCCCGGCAGACAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
3UTR GCA 72 bp AGGCCTGCGGGTGGAAGACACCAGGGTGCAGCCTGGTaGATGGTCCGGGGCTTGGCCTCCCTATGGGGCGTG +
Preference number: 3 (lower is better)
Translates to: RPAGGRHQGAAW*MVRGLASLWGV
Trigger: CACGCCCCATAGGGAGGCCAAGCCCCGGACCATGCACCAGGCTGCACCCTGGTGTCTTCCACCCGCAGGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
3UTR GCA 72 bp GCCTCTGCTGTCCTGGCCGCACATAGAGCCCTGTCCTaGTGTGTCTGCCGGGCACACCCCGGTCACTCAGCC +
Preference number: 3 (lower is better)
Translates to: ASAVLAAHRALS*CVCRAHPGHSA
Trigger: GGCTGAGTGACCGGGGTGTGCCCGGCAGACACAGCAGGACAGGGCTCTATGTGCGGCCAGGACAGCAGAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
3UTR CCA 72 bp TGGGGGAGGCTGCTTGGAGCATGGGAGGCCTGCGGGTaGAAGACACCAGGGTGCAGCCTGGTGCATGGTCCG +
Preference number: 3 (lower is better)
Translates to: WGRLLGAWEACG*KTPGCSLVHGP
Trigger: CGGACCATGCACCAGGCTGCACCCTGGTGTCTTCCACCCGCAGGCCTCCCATGCTCCAAGCAGCCTCCCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
3UTR GCA 72 bp GTCCTGGCCGCACATAGAGCCCTGTCCTGCTGTGTCTaGCGGGCACACCCCGGTCACTCAGCCACACTGGCT +
Preference number: 3 (lower is better)
Translates to: VLAAHRALSCCV*RAHPGHSATLA
Trigger: AGCCAGTGTGGCTGAGTGACCGGGGTGTGCCCGGCAGACACAGCAGGACAGGGCTCTATGTGCGGCCAGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
3UTR-3UTR CAA 90 bp TCGTGCCAGCCTCCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCCTCCAGGCTGGGGGAGGCTGCTaGGAGCATGGGAGGCCTGCG +
Preference number: 3 (lower is better)
Translates to: SCQPPRHGLRFVAVHVLQAGGGC*EHGRPA
Trigger: CGCAGGCCTCCCATGCTCCAAGCAGCCTCCCCCAGC...CTGGAGGACATGGACAGCGACAAACCTGAGGCCGTGTCTAGGAGGCTGGCACGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
3UTR-3UTR CAA 90 bp TCGTGCCAGCCTCCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCCTCCAGTGCATGGTCCGGGGCTaGGCCTCCCTATGGGGCGTG +
Preference number: 3 (lower is better)
Translates to: SCQPPRHGLRFVAVHVLQCMVRG*ASLWGV
Trigger: CACGCCCCATAGGGAGGCCAAGCCCCGGACCATGCA...CTGGAGGACATGGACAGCGACAAACCTGAGGCCGTGTCTAGGAGGCTGGCACGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
3UTR-3UTR CAA 90 bp GGGGCTGTGGTACATGCAGAGGCGGCGGCTGTCCCAGCAGCCTGGCCAGGAGATAGGCACGTGTTTGAGTaGGCATCACTGTCCCCAGAC +
Preference number: 3 (lower is better)
Translates to: GAVVHAEAAAVPAAWPGDRHVFE*ASLSPD
Trigger: GTCTGGGGACAGTGATGCCAACTCAAACACGTGCCT...ATCTCCTGGCCAGGCTGCTGGGACAGCCGCCGCCTCTGCATGTACCACAGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
3UTR-3UTR CAA 90 bp AAGCAGTCGTGCCAGCCTCCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCTGCATGGTCCGGGGCTaGGCCTCCCTATGGGGCGTG +
Preference number: 3 (lower is better)
Translates to: KQSCQPPRHGLRFVAVHVCMVRG*ASLWGV
Trigger: CACGCCCCATAGGGAGGCCAAGCCCCGGACCATGCA...GACATGGACAGCGACAAACCTGAGGCCGTGTCTAGGAGGCTGGCACGACTGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
3UTR-3UTR CAA 90 bp AAACTGTATTTATTAAAACAGGCAAGGGGCTGGGCTGCGGCAGGGCCCAGGTGCTGCATGGTCCGGGGCTaGGCCTCCCTATGGGGCGTG +
Preference number: 3 (lower is better)
Translates to: KLYLLKQARGWAAAGPRCCMVRG*ASLWGV
Trigger: CACGCCCCATAGGGAGGCCAAGCCCCGGACCATGCA...GCACCTGGGCCCTGCCGCAGCCCAGCCCCTTGCCTGTTTTAATAAATACAGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000671997.1
ENST00000672944.1
3UTR-3UTR CAA 90 bp GTCCTCCAGCACCCCTCTTACCAGACCACAAGGAGCTGCATTATGATGTGTGACGCTGGGGGAGGCTGCTaGGAGCATGGGAGGCCTGCG +
Preference number: 3 (lower is better)
Translates to: VLQHPSYQTTRSCIMMCDAGGGC*EHGRPA
Trigger: CGCAGGCCTCCCATGCTCCAAGCAGCCTCCCCCAGC...GTCACACATCATAATGCAGCTCCTTGTGGTCTGGTAAGAGGGGTGCTGGAGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
3UTR-3UTR CAA 90 bp CAGCCTCCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCCTCCAGCACCCCGGAGAAGGCACGTGTTaGAGTTGGCATCACTGTCCC +
Preference number: 3 (lower is better)
Translates to: QPPRHGLRFVAVHVLQHPGEGTC*SWHHCP
Trigger: GGGACAGTGATGCCAACTCAAACACGTGCCTTCTCC...GGGGTGCTGGAGGACATGGACAGCGACAAACCTGAGGCCGTGTCTAGGAGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
3UTR-3UTR CAA 90 bp TCGTGCCAGCCTCCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCCTCCAGAGGCACGTGTTTGAGTaGGCATCACTGTCCCCAGAC +
Preference number: 3 (lower is better)
Translates to: SCQPPRHGLRFVAVHVLQRHVFE*ASLSPD
Trigger: GTCTGGGGACAGTGATGCCAACTCAAACACGTGCCT...CTGGAGGACATGGACAGCGACAAACCTGAGGCCGTGTCTAGGAGGCTGGCACGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
3UTR CCA 72 bp AGGAGCTGCATTATGATGTGTGACTTAGGTCTTGGTTaGAGGGCTGAGCGGCCGCAAGTGCTGGGGGAGGCT +
Preference number: 3 (lower is better)
Translates to: RSCIMMCDLGLG*RAERPQVLGEA
Trigger: AGCCTCCCCCAGCACTTGCGGCCGCTCAGCCCTCCAACCAAGACCTAAGTCACACATCATAATGCAGCTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
3UTR GCA 72 bp CAACCCCCAGCTCGGCTCCCAGGAAGACACACACAGTaGTGCTGCCTAATCCTCTCTTTATTTGGTCTCTGC +
Preference number: 3 (lower is better)
Translates to: QPPARLPGRHTQ*CCLILSLFGLC
Trigger: GCAGAGACCAAATAAAGAGAGGATTAGGCAGCAGCACTGTGTGTGTCTTCCTGGGAGCCGAGCTGGGGGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000671997.1
ENST00000672944.1
3UTR-3UTR CAA 90 bp GTCCTCCAGCACCCCTCTTACCAGACCACAAGGAGCTGCATTATGATGTGTGACAGGCACGTGTTTGAGTaGGCATCACTGTCCCCAGAC +
Preference number: 3 (lower is better)
Translates to: VLQHPSYQTTRSCIMMCDRHVFE*ASLSPD
Trigger: GTCTGGGGACAGTGATGCCAACTCAAACACGTGCCT...GTCACACATCATAATGCAGCTCCTTGTGGTCTGGTAAGAGGGGTGCTGGAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
3UTR TCA 72 bp TGCTGCTGCCTAATCCTCTCTTTATTTGGTCTCTGCTaGAGCAGTCGTGCCAGCCTCCTAGACACGGCCTCA +
Preference number: 3 (lower is better)
Translates to: CCCLILSLFGLC*SSRASLLDTAS
Trigger: TGAGGCCGTGTCTAGGAGGCTGGCACGACTGCTTCAGCAGAGACCAAATAAAGAGAGGATTAGGCAGCAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000671997.1
ENST00000672944.1
3UTR GCA 72 bp GTCCTCCAGCACCCCTCTTACCAGACCACAAGGAGCTaGATTATGATGTGTGACTTAGGTCTTGGTTGGAGG +
Preference number: 3 (lower is better)
Translates to: VLQHPSYQTTRS*IMMCDLGLGWR
Trigger: CCTCCAACCAAGACCTAAGTCACACATCATAATGCAGCTCCTTGTGGTCTGGTAAGAGGGGTGCTGGAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
3UTR-3UTR CAA 90 bp CCAGGAAGACACACACAGTGCTGCTGCCTAATCCTCTCTTTATTTGGTCTCTGCGGAGAAGGCACGTGTTaGAGTTGGCATCACTGTCCC +
Preference number: 3 (lower is better)
Translates to: PGRHTQCCCLILSLFGLCGEGTC*SWHHCP
Trigger: GGGACAGTGATGCCAACTCAAACACGTGCCTTCTCC...GCAGAGACCAAATAAAGAGAGGATTAGGCAGCAGCACTGTGTGTGTCTTCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000671997.1
ENST00000672944.1
CDS-3UTR GCA 90 bp CGGGCACACCCCGGTCACTCAGCCACACTGGCTCGGCCCAGCGCCTTCCCGAGGTCGGATCCGCGACAGTaGGGGCTCGGCCCAGCCCGT +
Preference number: 4 (lower is better)
Translates to: RAHPGHSATLARPSAFPRSDPRQ*GLGPAR
Trigger: ACGGGCTGGGCCGAGCCCGCACTGTCGCGGATCCGA...CCTCGGGAAGGCGCTGGGCCGAGCCAGTGTGGCTGAGTGACCGGGGTGTGCCCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328957.13
ENST00000672944.1
CDS-3UTR CCA 90 bp CGGGCACACCCCGGTCACTCAGCCACACTGGCTCGGCCCAGCGCCTTCCCGAGGCCTTCCCGAGGTCTGTaGGGGTCCGGGCGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: RAHPGHSATLARPSAFPRPSRGL*GSGRRW
Trigger: CCACCTCCGCCCGGACCCCCACAGACCTCGGGAAGG...CCTCGGGAAGGCGCTGGGCCGAGCCAGTGTGGCTGAGTGACCGGGGTGTGCCCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR TCA 90 bp CGGGCACACCCCGGTCACTCAGCCACACTGGCTCGGCCCAGCGCCTTCCCGAGGGGTCCTGATGGGTGCTaGCTCGTCGCCGCGGTCCAG +
Preference number: 4 (lower is better)
Translates to: RAHPGHSATLARPSAFPRGPDGC*LVAAVQ
Trigger: CTGGACCGCGGCGACGAGTCAGCACCCATCAGGACC...CCTCGGGAAGGCGCTGGGCCGAGCCAGTGTGGCTGAGTGACCGGGGTGTGCCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000411988.6
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp CGGGCACACCCCGGTCACTCAGCCACACTGGCTCGGCCCAGCGCCTTCCCGAGGGTGCAGCCTGGTGCATaGTCCGGGGCTTGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: RAHPGHSATLARPSAFPRVQPGA*SGAWPP
Trigger: GGGAGGCCAAGCCCCGGACCATGCACCAGGCTGCAC...CCTCGGGAAGGCGCTGGGCCGAGCCAGTGTGGCTGAGTGACCGGGGTGTGCCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR TCA 90 bp CGGGCACACCCCGGTCACTCAGCCACACTGGCTCGGCCCAGCGCCTTCCCGAGGTGGGGCCACTCTGGGTaGAGTCCCACAGCCGCTGTG +
Preference number: 4 (lower is better)
Translates to: RAHPGHSATLARPSAFPRWGHSG*SPTAAV
Trigger: CACAGCGGCTGTGGGACTTCACCCAGAGTGGCCCCA...CCTCGGGAAGGCGCTGGGCCGAGCCAGTGTGGCTGAGTGACCGGGGTGTGCCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR GCA 90 bp GGGGCTGTGGTACATGCAGAGGCGGCGGCTGTCCCAGCAGCCTGGCCAGGAGATGGCGCTCGGTGTCTGTaGCGGCTCCTGTCCTGCCCG +
Preference number: 4 (lower is better)
Translates to: GAVVHAEAAAVPAAWPGDGARCL*RLLSCP
Trigger: CGGGCAGGACAGGAGCCGGCACAGACACCGAGCGCC...ATCTCCTGGCCAGGCTGCTGGGACAGCCGCCGCCTCTGCATGTACCACAGCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328957.13
ENST00000672944.1
CDS-3UTR GCA 90 bp GGGGCTGTGGTACATGCAGAGGCGGCGGCTGTCCCAGCAGCCTGGCCAGGAGATCGCCATGAACACGGCTaGAGCGGGGGCCTCACCCGC +
Preference number: 4 (lower is better)
Translates to: GAVVHAEAAAVPAAWPGDRHEHG*SGGLTR
Trigger: GCGGGTGAGGCCCCCGCTGCAGCCGTGTTCATGGCG...ATCTCCTGGCCAGGCTGCTGGGACAGCCGCCGCCTCTGCATGTACCACAGCCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328957.13
ENST00000672944.1
CDS-3UTR GCA 90 bp CTGCTGTCCTGGCCGCACATAGAGCCCTGTCCTGCTGTGTCTGCCGGGCACACCGGCAAGGGGCTGGGCTaGGGCAGGGCCCAGGTGCCT +
Preference number: 4 (lower is better)
Translates to: LLSWPHIEPCPAVSAGHTGKGLG*GRAQVP
Trigger: AGGCACCTGGGCCCTGCCGCAGCCCAGCCCCTTGCC...GGTGTGCCCGGCAGACACAGCAGGACAGGGCTCTATGTGCGGCCAGGACAGCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000671997.1
ENST00000672944.1
CDS-3UTR GCA 90 bp GTCTTGGTTGGAGGGCTGAGCGGCCGCAAGTGCTGGGGGAGGCTGCTTGGAGCAGGCAAGGGGCTGGGCTaGGGCAGGGCCCAGGTGCCT +
Preference number: 4 (lower is better)
Translates to: VLVGGLSGRKCWGRLLGAGKGLG*GRAQVP
Trigger: AGGCACCTGGGCCCTGCCGCAGCCCAGCCCCTTGCC...TGCTCCAAGCAGCCTCCCCCAGCACTTGCGGCCGCTCAGCCCTCCAACCAAGAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000671997.1
ENST00000672944.1
CDS-3UTR CCA 90 bp GGGCTGTGGTACATGCAGAGGCGGCGGCTGTCCCAGCAGCCTGGCCAGGAGATACCAGGCAGCGGCCCGTaGCCCGGCTCACAATGGGGC +
Preference number: 4 (lower is better)
Translates to: GLWYMQRRRLSQQPGQEIPGSGP*PGSQWG
Trigger: GCCCCATTGTGAGCCGGGCCACGGGCCGCTGCCTGG...TATCTCCTGGCCAGGCTGCTGGGACAGCCGCCGCCTCTGCATGTACCACAGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp GGGGAGGCTGCTTGGAGCATGGGAGGCCTGCGGGTGGAAGACACCAGGGTGCAGCCTTCCCGAGGTCTGTaGGGGTCCGGGCGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: GEAAWSMGGLRVEDTRVQPSRGL*GSGRRW
Trigger: CCACCTCCGCCCGGACCCCCACAGACCTCGGGAAGG...CTGCACCCTGGTGTCTTCCACCCGCAGGCCTCCCATGCTCCAAGCAGCCTCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp TGTCTGCCGGGCACACCCCGGTCACTCAGCCACACTGGCTCGGCCCAGCGCCTTGTGCAGCCTGGTGCATaGTCCGGGGCTTGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: CLPGTPRSLSHTGSAQRLVQPGA*SGAWPP
Trigger: GGGAGGCCAAGCCCCGGACCATGCACCAGGCTGCAC...AAGGCGCTGGGCCGAGCCAGTGTGGCTGAGTGACCGGGGTGTGCCCGGCAGACA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR TCA 90 bp CGGGCACACCCCGGTCACTCAGCCACACTGGCTCGGCCCAGCGCCTTCCCGAGGTCCAGATGCAGTGGGTaGCACCCTGGTCACTCAGCC +
Preference number: 4 (lower is better)
Translates to: RAHPGHSATLARPSAFPRSRCSG*HPGHSA
Trigger: GGCTGAGTGACCAGGGTGTCACCCACTGCATCTGGA...CCTCGGGAAGGCGCTGGGCCGAGCCAGTGTGGCTGAGTGACCGGGGTGTGCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR GCA 90 bp GGGCTGTGGTACATGCAGAGGCGGCGGCTGTCCCAGCAGCCTGGCCAGGAGATAGGCGCTCGGTGTCTGTaGCGGCTCCTGTCCTGCCCG +
Preference number: 4 (lower is better)
Translates to: GLWYMQRRRLSQQPGQEIGARCL*RLLSCP
Trigger: CGGGCAGGACAGGAGCCGGCACAGACACCGAGCGCC...TATCTCCTGGCCAGGCTGCTGGGACAGCCGCCGCCTCTGCATGTACCACAGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328957.13
ENST00000672944.1
CDS-3UTR GCA 90 bp CTGCTGTCCTGGCCGCACATAGAGCCCTGTCCTGCTGTGTCTGCCGGGCACACCCGCCATGAACACGGCTaGAGCGGGGGCCTCACCCGC +
Preference number: 4 (lower is better)
Translates to: LLSWPHIEPCPAVSAGHTRHEHG*SGGLTR
Trigger: GCGGGTGAGGCCCCCGCTGCAGCCGTGTTCATGGCG...GGTGTGCCCGGCAGACACAGCAGGACAGGGCTCTATGTGCGGCCAGGACAGCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328957.13
ENST00000672944.1
CDS-3UTR GCA 90 bp CGGGCACACCCCGGTCACTCAGCCACACTGGCTCGGCCCAGCGCCTTCCCGAGGCGGCGCGCAGGGCGTTaGGCTTGGCATAGTAGTCAA +
Preference number: 4 (lower is better)
Translates to: RAHPGHSATLARPSAFPRRRAGR*AWHSSQ
Trigger: TTGACTACTATGCCAAGCGCAACGCCCTGCGCGCCG...CCTCGGGAAGGCGCTGGGCCGAGCCAGTGTGGCTGAGTGACCGGGGTGTGCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR GCA 90 bp CGGGCACACCCCGGTCACTCAGCCACACTGGCTCGGCCCAGCGCCTTCCCGAGGCGGAGGTGGGGTCAGTaGCGTGCGTGTTTGATCCAG +
Preference number: 4 (lower is better)
Translates to: RAHPGHSATLARPSAFPRRRWGQ*RACLIQ
Trigger: CTGGATCAAACACGCACGGCACTGACCCCACCTCCG...CCTCGGGAAGGCGCTGGGCCGAGCCAGTGTGGCTGAGTGACCGGGGTGTGCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR GCA 90 bp CGGGCACACCCCGGTCACTCAGCCACACTGGCTCGGCCCAGCGCCTTCCCGAGGCATAGAGCCCTGTCCTaGTGTGTCTGCCGGGCACAC +
Preference number: 4 (lower is better)
Translates to: RAHPGHSATLARPSAFPRHRALS*CVCRAH
Trigger: GTGTGCCCGGCAGACACAGCAGGACAGGGCTCTATG...CCTCGGGAAGGCGCTGGGCCGAGCCAGTGTGGCTGAGTGACCGGGGTGTGCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR GCA 90 bp GGGGCTGTGGTACATGCAGAGGCGGCGGCTGTCCCAGCAGCCTGGCCAGGAGATGGGGGCTGTGGTACATaGAGAGGCGGCGGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: GAVVHAEAAAVPAAWPGDGGCGT*RGGGCP
Trigger: GGGACAGCCGCCGCCTCTGCATGTACCACAGCCCCC...ATCTCCTGGCCAGGCTGCTGGGACAGCCGCCGCCTCTGCATGTACCACAGCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR GCA 90 bp TGTCTGCCGGGCACACCCCGGTCACTCAGCCACACTGGCTCGGCCCAGCGCCTTCTGAGCGGCCGCAAGTaGTGGGGGAGGCTGCTTGGA +
Preference number: 4 (lower is better)
Translates to: CLPGTPRSLSHTGSAQRLLSGRK*WGRLLG
Trigger: TCCAAGCAGCCTCCCCCAGCACTTGCGGCCGCTCAG...AAGGCGCTGGGCCGAGCCAGTGTGGCTGAGTGACCGGGGTGTGCCCGGCAGACA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR GCA 90 bp GGGGCTGTGGTACATGCAGAGGCGGCGGCTGTCCCAGCAGCCTGGCCAGGAGATTCCGCGGCGCCGCCGTaGCAGGCTGAAGTTGGCCTT +
Preference number: 4 (lower is better)
Translates to: GAVVHAEAAAVPAAWPGDSAAPP*QAEVGL
Trigger: AAGGCCAACTTCAGCCTGGCACGGCGGCGCCGCGGA...ATCTCCTGGCCAGGCTGCTGGGACAGCCGCCGCCTCTGCATGTACCACAGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397325.6
ENST00000671997.1
CDS-3UTR CCA 90 bp GGGCTGTGGTACATGCAGAGGCGGCGGCTGTCCCAGCAGCCTGGCCAGGAGATACCAGCGTGCCCACCTTaGCGTGTCGGCTGCGCACCC +
Preference number: 4 (lower is better)
Translates to: GLWYMQRRRLSQQPGQEIPACPP*RVGCAP
Trigger: GGGTGCGCAGCCGACACGCCAAGGTGGGCACGCTGG...TATCTCCTGGCCAGGCTGCTGGGACAGCCGCCGCCTCTGCATGTACCACAGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328957.13
ENST00000672944.1
CDS-3UTR CCA 90 bp CTGCTGTCCTGGCCGCACATAGAGCCCTGTCCTGCTGTGTCTGCCGGGCACACCCTGGTGCGCTCGATGTaGGCCACGCGGGAGCAGGGC +
Preference number: 4 (lower is better)
Translates to: LLSWPHIEPCPAVSAGHTLVRSM*ATREQG
Trigger: GCCCTGCTCCCGCGTGGCCCACATCGAGCGCACCAG...GGTGTGCCCGGCAGACACAGCAGGACAGGGCTCTATGTGCGGCCAGGACAGCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp GGGCTGTGGTACATGCAGAGGCGGCGGCTGTCCCAGCAGCCTGGCCAGGAGATAGGGTCCGGGCGGAGGTaGGGTCAGTGCCGTGCGTGT +
Preference number: 4 (lower is better)
Translates to: GLWYMQRRRLSQQPGQEIGSGRR*GQCRAC
Trigger: ACACGCACGGCACTGACCCCACCTCCGCCCGGACCC...TATCTCCTGGCCAGGCTGCTGGGACAGCCGCCGCCTCTGCATGTACCACAGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp GGGCTGTGGTACATGCAGAGGCGGCGGCTGTCCCAGCAGCCTGGCCAGGAGATACCTTCCCGAGGTCTGTaGGGGTCCGGGCGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: GLWYMQRRRLSQQPGQEIPSRGL*GSGRRW
Trigger: CCACCTCCGCCCGGACCCCCACAGACCTCGGGAAGG...TATCTCCTGGCCAGGCTGCTGGGACAGCCGCCGCCTCTGCATGTACCACAGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp CTGCTGTCCTGGCCGCACATAGAGCCCTGTCCTGCTGTGTCTGCCGGGCACACCCCTTCCCGAGGTCTGTaGGGGTCCGGGCGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: LLSWPHIEPCPAVSAGHTPSRGL*GSGRRW
Trigger: CCACCTCCGCCCGGACCCCCACAGACCTCGGGAAGG...GGTGTGCCCGGCAGACACAGCAGGACAGGGCTCTATGTGCGGCCAGGACAGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp GGGGAGGCTGCTTGGAGCATGGGAGGCCTGCGGGTGGAAGACACCAGGGTGCAGGCATGGTCCGGGGCTTaGCCTCCCTATGGGGCGTGG +
Preference number: 4 (lower is better)
Translates to: GEAAWSMGGLRVEDTRVQAWSGA*PPYGAW
Trigger: CCACGCCCCATAGGGAGGCCAAGCCCCGGACCATGC...CTGCACCCTGGTGTCTTCCACCCGCAGGCCTCCCATGCTCCAAGCAGCCTCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp GGGGAGGCTGCTTGGAGCATGGGAGGCCTGCGGGTGGAAGACACCAGGGTGCAGTGCCTGGGAAAGAGGTaGGACCGGGCCCCAACCCCC +
Preference number: 4 (lower is better)
Translates to: GEAAWSMGGLRVEDTRVQCLGKR*DRAPTP
Trigger: GGGGGTTGGGGCCCGGTCCCACCTCTTTCCCAGGCA...CTGCACCCTGGTGTCTTCCACCCGCAGGCCTCCCATGCTCCAAGCAGCCTCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000671997.1
ENST00000672944.1
CDS-3UTR GCA 90 bp TGTCTGCCGGGCACACCCCGGTCACTCAGCCACACTGGCTCGGCCCAGCGCCTTTGTAGGGCTTCCTGGTaGGCTCGATGTGGGCCACGC +
Preference number: 4 (lower is better)
Translates to: CLPGTPRSLSHTGSAQRLCRASW*ARCGPR
Trigger: GCGTGGCCCACATCGAGCGCACCAGGAAGCCCTACA...AAGGCGCTGGGCCGAGCCAGTGTGGCTGAGTGACCGGGGTGTGCCCGGCAGACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR GCA 90 bp GGGGCTGTGGTACATGCAGAGGCGGCGGCTGTCCCAGCAGCCTGGCCAGGAGATCCCAGAGGCCCCAGCTaGAGCAGTCCATCAGCGCTG +
Preference number: 4 (lower is better)
Translates to: GAVVHAEAAAVPAAWPGDPRGPS*SSPSAL
Trigger: CAGCGCTGATGGACTGCTGCAGCTGGGGCCTCTGGG...ATCTCCTGGCCAGGCTGCTGGGACAGCCGCCGCCTCTGCATGTACCACAGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR GCA 90 bp TGTCTGCCGGGCACACCCCGGTCACTCAGCCACACTGGCTCGGCCCAGCGCCTTTCTTCAGGGTGGGCATaGGGCCCGTGCCGTCATCCA +
Preference number: 4 (lower is better)
Translates to: CLPGTPRSLSHTGSAQRLSSGWA*GPCRHP
Trigger: TGGATGACGGCACGGGCCGCATGCCCACCCTGAAGA...AAGGCGCTGGGCCGAGCCAGTGTGGCTGAGTGACCGGGGTGTGCCCGGCAGACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR GCA 90 bp CTGCTGTCCTGGCCGCACATAGAGCCCTGTCCTGCTGTGTCTGCCGGGCACACCCCCGGGGCTCGGCTGTaGTCTATGGGCCTCGGACCT +
Preference number: 4 (lower is better)
Translates to: LLSWPHIEPCPAVSAGHTPGARL*SMGLGP
Trigger: AGGTCCGAGGCCCATAGAGCACAGCCGAGCCCCGGG...GGTGTGCCCGGCAGACACAGCAGGACAGGGCTCTATGTGCGGCCAGGACAGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000411988.6
ENST00000672816.1
CDS-3UTR CCA 90 bp GTCTTGGTTGGAGGGCTGAGCGGCCGCAAGTGCTGGGGGAGGCTGCTTGGAGCACGTCATCACGCAGGGTaGCCGCCAAGCCACCCTGGC +
Preference number: 4 (lower is better)
Translates to: VLVGGLSGRKCWGRLLGARHHAG*PPSHPG
Trigger: GCCAGGGTGGCTTGGCGGCCACCCTGCGTGATGACG...TGCTCCAAGCAGCCTCCCCCAGCACTTGCGGCCGCTCAGCCCTCCAACCAAGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328957.13
ENST00000672944.1
CDS-3UTR CCA 90 bp CGGGCACACCCCGGTCACTCAGCCACACTGGCTCGGCCCAGCGCCTTCCCGAGGTGTTGTAGGGCTTCCTaGTGCGCTCGATGTGGGCCA +
Preference number: 4 (lower is better)
Translates to: RAHPGHSATLARPSAFPRCCRAS*CARCGP
Trigger: TGGCCCACATCGAGCGCACCAGGAAGCCCTACAACA...CCTCGGGAAGGCGCTGGGCCGAGCCAGTGTGGCTGAGTGACCGGGGTGTGCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp TGTCTGCCGGGCACACCCCGGTCACTCAGCCACACTGGCTCGGCCCAGCGCCTTCAGGCAAGAAGGCTGTaGAGCCCAGAGGCCCCAGCT +
Preference number: 4 (lower is better)
Translates to: CLPGTPRSLSHTGSAQRLQARRL*SPEAPA
Trigger: AGCTGGGGCCTCTGGGCTCCACAGCCTTCTTGCCTG...AAGGCGCTGGGCCGAGCCAGTGTGGCTGAGTGACCGGGGTGTGCCCGGCAGACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp GGGGAGGCTGCTTGGAGCATGGGAGGCCTGCGGGTGGAAGACACCAGGGTGCAGGTCACTCAGCCACACTaGCTCGGCCCAGCGCCTTCC +
Preference number: 4 (lower is better)
Translates to: GEAAWSMGGLRVEDTRVQVTQPH*LGPAPS
Trigger: GGAAGGCGCTGGGCCGAGCCAGTGTGGCTGAGTGAC...CTGCACCCTGGTGTCTTCCACCCGCAGGCCTCCCATGCTCCAAGCAGCCTCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp CTGCTGTCCTGGCCGCACATAGAGCCCTGTCCTGCTGTGTCTGCCGGGCACACCGTGCAGCCTGGTGCATaGTCCGGGGCTTGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: LLSWPHIEPCPAVSAGHTVQPGA*SGAWPP
Trigger: GGGAGGCCAAGCCCCGGACCATGCACCAGGCTGCAC...GGTGTGCCCGGCAGACACAGCAGGACAGGGCTCTATGTGCGGCCAGGACAGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp GGGGCTGTGGTACATGCAGAGGCGGCGGCTGTCCCAGCAGCCTGGCCAGGAGATTGGGAGGCCTGCGGGTaGAAGACACCAGGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: GAVVHAEAAAVPAAWPGDWEACG*KTPGCS
Trigger: GCTGCACCCTGGTGTCTTCCACCCGCAGGCCTCCCA...ATCTCCTGGCCAGGCTGCTGGGACAGCCGCCGCCTCTGCATGTACCACAGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp TGTCTGCCGGGCACACCCCGGTCACTCAGCCACACTGGCTCGGCCCAGCGCCTTAGGCTGCTTGGAGCATaGGAGGCCTGCGGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: CLPGTPRSLSHTGSAQRLRLLGA*EACGWK
Trigger: CTTCCACCCGCAGGCCTCCCATGCTCCAAGCAGCCT...AAGGCGCTGGGCCGAGCCAGTGTGGCTGAGTGACCGGGGTGTGCCCGGCAGACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp GGGGAGGCTGCTTGGAGCATGGGAGGCCTGCGGGTGGAAGACACCAGGGTGCAGAGCGGCCGCAAGTGCTaGGGGAGGCTGCTTGGAGCA +
Preference number: 4 (lower is better)
Translates to: GEAAWSMGGLRVEDTRVQSGRKC*GRLLGA
Trigger: TGCTCCAAGCAGCCTCCCCCAGCACTTGCGGCCGCT...CTGCACCCTGGTGTCTTCCACCCGCAGGCCTCCCATGCTCCAAGCAGCCTCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp CTGCTGTCCTGGCCGCACATAGAGCCCTGTCCTGCTGTGTCTGCCGGGCACACCTGCCTGGGAAAGAGGTaGGACCGGGCCCCAACCCCC +
Preference number: 4 (lower is better)
Translates to: LLSWPHIEPCPAVSAGHTCLGKR*DRAPTP
Trigger: GGGGGTTGGGGCCCGGTCCCACCTCTTTCCCAGGCA...GGTGTGCCCGGCAGACACAGCAGGACAGGGCTCTATGTGCGGCCAGGACAGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000671997.1
ENST00000672944.1
CDS-3UTR CCA 90 bp CCTCAGCCTCTGCTGTCCTGGCCGCACATAGAGCCCTGTCCTGCTGTGTCTGCCGCTGTGGGCCTGGCGTaGCCCCAGGGCTCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: PQPLLSWPHIEPCPAVSAAVGLA*PQGSAV
Trigger: CACAGCTGAGCCCTGGGGCCACGCCAGGCCCACAGC...GGCAGACACAGCAGGACAGGGCTCTATGTGCGGCCAGGACAGCAGAGGCTGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411988.6
ENST00000672816.1
CDS-3UTR CCA 90 bp TGTCTGCCGGGCACACCCCGGTCACTCAGCCACACTGGCTCGGCCCAGCGCCTTCCACACTCCAGTCGCTaGCAGTGCTGCTGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: CLPGTPRSLSHTGSAQRLPHSSR*QCCCGP
Trigger: AGGCCCACAGCAGCACTGCCAGCGACTGGAGTGTGG...AAGGCGCTGGGCCGAGCCAGTGTGGCTGAGTGACCGGGGTGTGCCCGGCAGACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411988.6
ENST00000672816.1
CDS-3UTR TCA 90 bp GGGGAGGCTGCTTGGAGCATGGGAGGCCTGCGGGTGGAAGACACCAGGGTGCAGGGGAGATGCGGTCGCTaGGCTGAGCGTTGTAGCCGT +
Preference number: 4 (lower is better)
Translates to: GEAAWSMGGLRVEDTRVQGRCGR*AERCSR
Trigger: ACGGCTACAACGCTCAGCTCAGCGACCGCATCTCCC...CTGCACCCTGGTGTCTTCCACCCGCAGGCCTCCCATGCTCCAAGCAGCCTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328957.13
ENST00000672944.1
CDS-3UTR TCA 90 bp CCTCAGCCTCTGCTGTCCTGGCCGCACATAGAGCCCTGTCCTGCTGTGTCTGCCGGTCCTGATGGGTGCTaGCTCGTCGCCGCGGTCCAG +
Preference number: 4 (lower is better)
Translates to: PQPLLSWPHIEPCPAVSAGPDGC*LVAAVQ
Trigger: CTGGACCGCGGCGACGAGTCAGCACCCATCAGGACC...GGCAGACACAGCAGGACAGGGCTCTATGTGCGGCCAGGACAGCAGAGGCTGAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000411988.6
ENST00000672816.1
ENST00000672944.1
CDS-3UTR TCA 90 bp GGGGAGGCTGCTTGGAGCATGGGAGGCCTGCGGGTGGAAGACACCAGGGTGCAGTCATGGCTGGGGTCCTaGTGGGTGCTGACTCGTCGC +
Preference number: 4 (lower is better)
Translates to: GEAAWSMGGLRVEDTRVQSWLGS*WVLTRR
Trigger: GCGACGAGTCAGCACCCATCAGGACCCCAGCCATGA...CTGCACCCTGGTGTCTTCCACCCGCAGGCCTCCCATGCTCCAAGCAGCCTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000411988.6
ENST00000672816.1
ENST00000672944.1
CDS-3UTR TCA 90 bp GGGGAGGCTGCTTGGAGCATGGGAGGCCTGCGGGTGGAAGACACCAGGGTGCAGCGACACTTCAGCCTCTaGCGCAGGGCCAGCCTCTCA +
Preference number: 4 (lower is better)
Translates to: GEAAWSMGGLRVEDTRVQRHFSL*RRASLS
Trigger: TGAGAGGCTGGCCCTGCGTCAGAGGCTGAAGTGTCG...CTGCACCCTGGTGTCTTCCACCCGCAGGCCTCCCATGCTCCAAGCAGCCTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR TCA 90 bp GGGGCTGTGGTACATGCAGAGGCGGCGGCTGTCCCAGCAGCCTGGCCAGGAGATCGACACTTCAGCCTCTaGCGCAGGGCCAGCCTCTCA +
Preference number: 4 (lower is better)
Translates to: GAVVHAEAAAVPAAWPGDRHFSL*RRASLS
Trigger: TGAGAGGCTGGCCCTGCGTCAGAGGCTGAAGTGTCG...ATCTCCTGGCCAGGCTGCTGGGACAGCCGCCGCCTCTGCATGTACCACAGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR TCA 90 bp GTCTTGGTTGGAGGGCTGAGCGGCCGCAAGTGCTGGGGGAGGCTGCTTGGAGCATGGGGCCACTCTGGGTaGAGTCCCACAGCCGCTGTG +
Preference number: 4 (lower is better)
Translates to: VLVGGLSGRKCWGRLLGAWGHSG*SPTAAV
Trigger: CACAGCGGCTGTGGGACTTCACCCAGAGTGGCCCCA...TGCTCCAAGCAGCCTCCCCCAGCACTTGCGGCCGCTCAGCCCTCCAACCAAGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR TCA 90 bp CTGCTGTCCTGGCCGCACATAGAGCCCTGTCCTGCTGTGTCTGCCGGGCACACCTGGGGCCACTCTGGGTaGAGTCCCACAGCCGCTGTG +
Preference number: 4 (lower is better)
Translates to: LLSWPHIEPCPAVSAGHTWGHSG*SPTAAV
Trigger: CACAGCGGCTGTGGGACTTCACCCAGAGTGGCCCCA...GGTGTGCCCGGCAGACACAGCAGGACAGGGCTCTATGTGCGGCCAGGACAGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR TCA 90 bp GTCTTGGTTGGAGGGCTGAGCGGCCGCAAGTGCTGGGGGAGGCTGCTTGGAGCAGCCGCCGTGCCAGGCTaGAGTTGGCCTTTGCATCCC +
Preference number: 4 (lower is better)
Translates to: VLVGGLSGRKCWGRLLGAAAVPG*SWPLHP
Trigger: GGGATGCAAAGGCCAACTTCAGCCTGGCACGGCGGC...TGCTCCAAGCAGCCTCCCCCAGCACTTGCGGCCGCTCAGCCCTCCAACCAAGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397325.6
ENST00000671997.1
CDS-3UTR GCA 90 bp GTCTTGGTTGGAGGGCTGAGCGGCCGCAAGTGCTGGGGGAGGCTGCTTGGAGCACCCAGAGGCCCCAGCTaGAGCAGTCCATCAGCGCTG +
Preference number: 4 (lower is better)
Translates to: VLVGGLSGRKCWGRLLGAPRGPS*SSPSAL
Trigger: CAGCGCTGATGGACTGCTGCAGCTGGGGCCTCTGGG...TGCTCCAAGCAGCCTCCCCCAGCACTTGCGGCCGCTCAGCCCTCCAACCAAGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR GCA 90 bp GGGGAGGCTGCTTGGAGCATGGGAGGCCTGCGGGTGGAAGACACCAGGGTGCAGTGGGCATGCGGCCCGTaGCGTCATCCACCAGACACT +
Preference number: 4 (lower is better)
Translates to: GEAAWSMGGLRVEDTRVQWACGP*RHPPDT
Trigger: AGTGTCTGGTGGATGACGGCACGGGCCGCATGCCCA...CTGCACCCTGGTGTCTTCCACCCGCAGGCCTCCCATGCTCCAAGCAGCCTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR GCA 90 bp GGGGAGGCTGCTTGGAGCATGGGAGGCCTGCGGGTGGAAGACACCAGGGTGCAGTCTTCAGGGTGGGCATaGGGCCCGTGCCGTCATCCA +
Preference number: 4 (lower is better)
Translates to: GEAAWSMGGLRVEDTRVQSSGWA*GPCRHP
Trigger: TGGATGACGGCACGGGCCGCATGCCCACCCTGAAGA...CTGCACCCTGGTGTCTTCCACCCGCAGGCCTCCCATGCTCCAAGCAGCCTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR GCA 90 bp GGGCTGTGGTACATGCAGAGGCGGCGGCTGTCCCAGCAGCCTGGCCAGGAGATACTGAGCGGCCGCAAGTaGTGGGGGAGGCTGCTTGGA +
Preference number: 4 (lower is better)
Translates to: GLWYMQRRRLSQQPGQEILSGRK*WGRLLG
Trigger: TCCAAGCAGCCTCCCCCAGCACTTGCGGCCGCTCAG...TATCTCCTGGCCAGGCTGCTGGGACAGCCGCCGCCTCTGCATGTACCACAGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR GCA 90 bp TGTCTGCCGGGCACACCCCGGTCACTCAGCCACACTGGCTCGGCCCAGCGCCTTCTGCTGAAGCAGTCGTaGCAGCCTCCTAGACACGGC +
Preference number: 4 (lower is better)
Translates to: CLPGTPRSLSHTGSAQRLLLKQS*QPPRHG
Trigger: GCCGTGTCTAGGAGGCTGGCACGACTGCTTCAGCAG...AAGGCGCTGGGCCGAGCCAGTGTGGCTGAGTGACCGGGGTGTGCCCGGCAGACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR GCA 90 bp CCTCAGCCTCTGCTGTCCTGGCCGCACATAGAGCCCTGTCCTGCTGTGTCTGCCCTCTGCTCGGAGCCCTaGCCTTCGCTGGAAGGGGCC +
Preference number: 4 (lower is better)
Translates to: PQPLLSWPHIEPCPAVSALCSEP*PSLEGA
Trigger: GGCCCCTTCCAGCGAAGGGCAGGGCTCCGAGCAGAG...GGCAGACACAGCAGGACAGGGCTCTATGTGCGGCCAGGACAGCAGAGGCTGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397325.6
ENST00000671997.1
CDS-3UTR GCA 90 bp CCTCAGCCTCTGCTGTCCTGGCCGCACATAGAGCCCTGTCCTGCTGTGTCTGCCCCCGGGGCTCGGCTGTaGTCTATGGGCCTCGGACCT +
Preference number: 4 (lower is better)
Translates to: PQPLLSWPHIEPCPAVSAPGARL*SMGLGP
Trigger: AGGTCCGAGGCCCATAGAGCACAGCCGAGCCCCGGG...GGCAGACACAGCAGGACAGGGCTCTATGTGCGGCCAGGACAGCAGAGGCTGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000411988.6
ENST00000672816.1
CDS-3UTR GCA 90 bp CTGCTGTCCTGGCCGCACATAGAGCCCTGTCCTGCTGTGTCTGCCGGGCACACCTCCAGTCGCTGGCAGTaGTGCTGTGGGCCTGGCGTG +
Preference number: 4 (lower is better)
Translates to: LLSWPHIEPCPAVSAGHTSSRWQ*CCGPGV
Trigger: CACGCCAGGCCCACAGCAGCACTGCCAGCGACTGGA...GGTGTGCCCGGCAGACACAGCAGGACAGGGCTCTATGTGCGGCCAGGACAGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411988.6
ENST00000672816.1
CDS-3UTR CCA 90 bp GGGGCTGTGGTACATGCAGAGGCGGCGGCTGTCCCAGCAGCCTGGCCAGGAGATTTGCCTTCCGCCTCCTaGCCGTCATCACGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: GAVVHAEAAAVPAAWPGDLPSAS*PSSRRV
Trigger: CACCCTGCGTGATGACGGCCAGGAGGCGGAAGGCAA...ATCTCCTGGCCAGGCTGCTGGGACAGCCGCCGCCTCTGCATGTACCACAGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328957.13
ENST00000672944.1
CDS-3UTR CCA 90 bp GGGGAGGCTGCTTGGAGCATGGGAGGCCTGCGGGTGGAAGACACCAGGGTGCAGCTGTACCGCACCAGCTaGGAGGACATCCCGTGGCAG +
Preference number: 4 (lower is better)
Translates to: GEAAWSMGGLRVEDTRVQLYRTS*EDIPWQ
Trigger: CTGCCACGGGATGTCCTCCCAGCTGGTGCGGTACAG...CTGCACCCTGGTGTCTTCCACCCGCAGGCCTCCCATGCTCCAAGCAGCCTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp GGGGCTGTGGTACATGCAGAGGCGGCGGCTGTCCCAGCAGCCTGGCCAGGAGATCACACTTCTTCAGGGTaGGCATGCGGCCCGTGCCGT +
Preference number: 4 (lower is better)
Translates to: GAVVHAEAAAVPAAWPGDHTSSG*ACGPCR
Trigger: ACGGCACGGGCCGCATGCCCACCCTGAAGAAGTGTG...ATCTCCTGGCCAGGCTGCTGGGACAGCCGCCGCCTCTGCATGTACCACAGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp GGGGAGGCTGCTTGGAGCATGGGAGGCCTGCGGGTGGAAGACACCAGGGTGCAGCACACTTCTTCAGGGTaGGCATGCGGCCCGTGCCGT +
Preference number: 4 (lower is better)
Translates to: GEAAWSMGGLRVEDTRVQHTSSG*ACGPCR
Trigger: ACGGCACGGGCCGCATGCCCACCCTGAAGAAGTGTG...CTGCACCCTGGTGTCTTCCACCCGCAGGCCTCCCATGCTCCAAGCAGCCTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp CAGCCTCCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCCTCCAGCACCCCGGGTCCGGGCGGAGGTaGGGTCAGTGCCGTGCGTGT +
Preference number: 4 (lower is better)
Translates to: QPPRHGLRFVAVHVLQHPGSGRR*GQCRAC
Trigger: ACACGCACGGCACTGACCCCACCTCCGCCCGGACCC...GGGGTGCTGGAGGACATGGACAGCGACAAACCTGAGGCCGTGTCTAGGAGGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp GGGCTGTGGTACATGCAGAGGCGGCGGCTGTCCCAGCAGCCTGGCCAGGAGATAGTCACTCAGCCACACTaGCTCGGCCCAGCGCCTTCC +
Preference number: 4 (lower is better)
Translates to: GLWYMQRRRLSQQPGQEIVTQPH*LGPAPS
Trigger: GGAAGGCGCTGGGCCGAGCCAGTGTGGCTGAGTGAC...TATCTCCTGGCCAGGCTGCTGGGACAGCCGCCGCCTCTGCATGTACCACAGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp GGGCTGTGGTACATGCAGAGGCGGCGGCTGTCCCAGCAGCCTGGCCAGGAGATACACCAGGGTGCAGCCTaGTGCATGGTCCGGGGCTTG +
Preference number: 4 (lower is better)
Translates to: GLWYMQRRRLSQQPGQEIHQGAA*CMVRGL
Trigger: CAAGCCCCGGACCATGCACCAGGCTGCACCCTGGTG...TATCTCCTGGCCAGGCTGCTGGGACAGCCGCCGCCTCTGCATGTACCACAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp GGGCTGTGGTACATGCAGAGGCGGCGGCTGTCCCAGCAGCCTGGCCAGGAGATATGGGAGGCCTGCGGGTaGAAGACACCAGGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: GLWYMQRRRLSQQPGQEIWEACG*KTPGCS
Trigger: GCTGCACCCTGGTGTCTTCCACCCGCAGGCCTCCCA...TATCTCCTGGCCAGGCTGCTGGGACAGCCGCCGCCTCTGCATGTACCACAGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp GGGGAGGCTGCTTGGAGCATGGGAGGCCTGCGGGTGGAAGACACCAGGGTGCAGAGGCTGCTTGGAGCATaGGAGGCCTGCGGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: GEAAWSMGGLRVEDTRVQRLLGA*EACGWK
Trigger: CTTCCACCCGCAGGCCTCCCATGCTCCAAGCAGCCT...CTGCACCCTGGTGTCTTCCACCCGCAGGCCTCCCATGCTCCAAGCAGCCTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR TCA 90 bp TCGTGCCAGCCTCCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCCTCCAGTCCTGGCCACCGCCATaGACACGGCTGCAGCGGGGG +
Preference number: 4 (lower is better)
Translates to: SCQPPRHGLRFVAVHVLQSWPPP*TRLQRG
Trigger: CCCCCGCTGCAGCCGTGTTCATGGCGGTGGCCAGGA...CTGGAGGACATGGACAGCGACAAACCTGAGGCCGTGTCTAGGAGGCTGGCACGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328957.13
ENST00000672944.1
CDS-3UTR TCA 90 bp GGGCTGTGGTACATGCAGAGGCGGCGGCTGTCCCAGCAGCCTGGCCAGGAGATACGGCCCAGCCCGTGTTaGACTCGACGTGGGCATCAA +
Preference number: 4 (lower is better)
Translates to: GLWYMQRRRLSQQPGQEIRPSPC*TRRGHQ
Trigger: TTGATGCCCACGTCGAGTTCAACACGGGCTGGGCCG...TATCTCCTGGCCAGGCTGCTGGGACAGCCGCCGCCTCTGCATGTACCACAGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328957.13
ENST00000672944.1
CDS-3UTR TCA 90 bp CTGCTGTCCTGGCCGCACATAGAGCCCTGTCCTGCTGTGTCTGCCGGGCACACCCGACACTTCAGCCTCTaGCGCAGGGCCAGCCTCTCA +
Preference number: 4 (lower is better)
Translates to: LLSWPHIEPCPAVSAGHTRHFSL*RRASLS
Trigger: TGAGAGGCTGGCCCTGCGTCAGAGGCTGAAGTGTCG...GGTGTGCCCGGCAGACACAGCAGGACAGGGCTCTATGTGCGGCCAGGACAGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR TCA 90 bp CCTCAGCCTCTGCTGTCCTGGCCGCACATAGAGCCCTGTCCTGCTGTGTCTGCCTGGGGCCACTCTGGGTaGAGTCCCACAGCCGCTGTG +
Preference number: 4 (lower is better)
Translates to: PQPLLSWPHIEPCPAVSAWGHSG*SPTAAV
Trigger: CACAGCGGCTGTGGGACTTCACCCAGAGTGGCCCCA...GGCAGACACAGCAGGACAGGGCTCTATGTGCGGCCAGGACAGCAGAGGCTGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR TCA 90 bp CCTCAGCCTCTGCTGTCCTGGCCGCACATAGAGCCCTGTCCTGCTGTGTCTGCCTCTTGGTTGGAGGGCTaGGCGGCCGCAAGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: PQPLLSWPHIEPCPAVSASWLEG*AAASAG
Trigger: CCCAGCACTTGCGGCCGCTCAGCCCTCCAACCAAGA...GGCAGACACAGCAGGACAGGGCTCTATGTGCGGCCAGGACAGCAGAGGCTGAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR GCA 90 bp CTGCTGTCCTGGCCGCACATAGAGCCCTGTCCTGCTGTGTCTGCCGGGCACACCCGCCATACACCTCCATaGCGGGGTCCAGCAGCCCAA +
Preference number: 4 (lower is better)
Translates to: LLSWPHIEPCPAVSAGHTRHTPP*RGPAAQ
Trigger: TTGGGCTGCTGGACCCCGGCATGGAGGTGTATGGCG...GGTGTGCCCGGCAGACACAGCAGGACAGGGCTCTATGTGCGGCCAGGACAGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000411988.6
ENST00000672816.1
ENST00000672944.1
CDS-3UTR GCA 90 bp CTGCTGTCCTGGCCGCACATAGAGCCCTGTCCTGCTGTGTCTGCCGGGCACACCTGGGCATGCGGCCCGTaGCGTCATCCACCAGACACT +
Preference number: 4 (lower is better)
Translates to: LLSWPHIEPCPAVSAGHTWACGP*RHPPDT
Trigger: AGTGTCTGGTGGATGACGGCACGGGCCGCATGCCCA...GGTGTGCCCGGCAGACACAGCAGGACAGGGCTCTATGTGCGGCCAGGACAGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR GCA 90 bp CTGCTGTCCTGGCCGCACATAGAGCCCTGTCCTGCTGTGTCTGCCGGGCACACCTCTTCAGGGTGGGCATaGGGCCCGTGCCGTCATCCA +
Preference number: 4 (lower is better)
Translates to: LLSWPHIEPCPAVSAGHTSSGWA*GPCRHP
Trigger: TGGATGACGGCACGGGCCGCATGCCCACCCTGAAGA...GGTGTGCCCGGCAGACACAGCAGGACAGGGCTCTATGTGCGGCCAGGACAGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR GCA 90 bp GGGGAGGCTGCTTGGAGCATGGGAGGCCTGCGGGTGGAAGACACCAGGGTGCAGCTGCTGAAGCAGTCGTaGCAGCCTCCTAGACACGGC +
Preference number: 4 (lower is better)
Translates to: GEAAWSMGGLRVEDTRVQLLKQS*QPPRHG
Trigger: GCCGTGTCTAGGAGGCTGGCACGACTGCTTCAGCAG...CTGCACCCTGGTGTCTTCCACCCGCAGGCCTCCCATGCTCCAAGCAGCCTCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR GCA 90 bp AAGCAGTCGTGCCAGCCTCCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCGGCAAGGGGCTGGGCTaGGGCAGGGCCCAGGTGCCT +
Preference number: 4 (lower is better)
Translates to: KQSCQPPRHGLRFVAVHVGKGLG*GRAQVP
Trigger: AGGCACCTGGGCCCTGCCGCAGCCCAGCCCCTTGCC...GACATGGACAGCGACAAACCTGAGGCCGTGTCTAGGAGGCTGGCACGACTGCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000671997.1
ENST00000672944.1
CDS-3UTR CCA 90 bp CTGCTGTCCTGGCCGCACATAGAGCCCTGTCCTGCTGTGTCTGCCGGGCACACCTTGCCTTCCGCCTCCTaGCCGTCATCACGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: LLSWPHIEPCPAVSAGHTLPSAS*PSSRRV
Trigger: CACCCTGCGTGATGACGGCCAGGAGGCGGAAGGCAA...GGTGTGCCCGGCAGACACAGCAGGACAGGGCTCTATGTGCGGCCAGGACAGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328957.13
ENST00000672944.1
CDS-3UTR CCA 90 bp TGTCTGCCGGGCACACCCCGGTCACTCAGCCACACTGGCTCGGCCCAGCGCCTTTGTTGTAGGGCTTCCTaGTGCGCTCGATGTGGGCCA +
Preference number: 4 (lower is better)
Translates to: CLPGTPRSLSHTGSAQRLCCRAS*CARCGP
Trigger: TGGCCCACATCGAGCGCACCAGGAAGCCCTACAACA...AAGGCGCTGGGCCGAGCCAGTGTGGCTGAGTGACCGGGGTGTGCCCGGCAGACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp CGGGCACACCCCGGTCACTCAGCCACACTGGCTCGGCCCAGCGCCTTCCCGAGGGCAGGGCGTTGCGCTTaGCATAGTAGTCAATGTCGT +
Preference number: 4 (lower is better)
Translates to: RAHPGHSATLARPSAFPRAGRCA*HSSQCR
Trigger: ACGACATTGACTACTATGCCAAGCGCAACGCCCTGC...CCTCGGGAAGGCGCTGGGCCGAGCCAGTGTGGCTGAGTGACCGGGGTGTGCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp TGTCTGCCGGGCACACCCCGGTCACTCAGCCACACTGGCTCGGCCCAGCGCCTTCCCGAAGTCCACCCCTaGGTTCGACATGGGGATGTT +
Preference number: 4 (lower is better)
Translates to: CLPGTPRSLSHTGSAQRLPEVHP*VRHGDV
Trigger: AACATCCCCATGTCGAACCCAGGGGTGGACTTCGGG...AAGGCGCTGGGCCGAGCCAGTGTGGCTGAGTGACCGGGGTGTGCCCGGCAGACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp GTCTTGGTTGGAGGGCTGAGCGGCCGCAAGTGCTGGGGGAGGCTGCTTGGAGCACTGTACCGCACCAGCTaGGAGGACATCCCGTGGCAG +
Preference number: 4 (lower is better)
Translates to: VLVGGLSGRKCWGRLLGALYRTS*EDIPWQ
Trigger: CTGCCACGGGATGTCCTCCCAGCTGGTGCGGTACAG...TGCTCCAAGCAGCCTCCCCCAGCACTTGCGGCCGCTCAGCCCTCCAACCAAGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp CTGCTGTCCTGGCCGCACATAGAGCCCTGTCCTGCTGTGTCTGCCGGGCACACCCAGGCAAGAAGGCTGTaGAGCCCAGAGGCCCCAGCT +
Preference number: 4 (lower is better)
Translates to: LLSWPHIEPCPAVSAGHTQARRL*SPEAPA
Trigger: AGCTGGGGCCTCTGGGCTCCACAGCCTTCTTGCCTG...GGTGTGCCCGGCAGACACAGCAGGACAGGGCTCTATGTGCGGCCAGGACAGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp GGGCTGTGGTACATGCAGAGGCGGCGGCTGTCCCAGCAGCCTGGCCAGGAGATACAGGCAAGAAGGCTGTaGAGCCCAGAGGCCCCAGCT +
Preference number: 4 (lower is better)
Translates to: GLWYMQRRRLSQQPGQEIQARRL*SPEAPA
Trigger: AGCTGGGGCCTCTGGGCTCCACAGCCTTCTTGCCTG...TATCTCCTGGCCAGGCTGCTGGGACAGCCGCCGCCTCTGCATGTACCACAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp CGGGCACACCCCGGTCACTCAGCCACACTGGCTCGGCCCAGCGCCTTCCCGAGGCATCCACCAGACACTTaGAGTCAGGCAAGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: RAHPGHSATLARPSAFPRHPPDT*SQARRL
Trigger: CAGCCTTCTTGCCTGACTCCAAGTGTCTGGTGGATG...CCTCGGGAAGGCGCTGGGCCGAGCCAGTGTGGCTGAGTGACCGGGGTGTGCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp CTGCTGTCCTGGCCGCACATAGAGCCCTGTCCTGCTGTGTCTGCCGGGCACACCCCACAGCCGCTGTGTTaGCCGCGCCACATCCTCACA +
Preference number: 4 (lower is better)
Translates to: LLSWPHIEPCPAVSAGHTPQPLC*PRHILT
Trigger: TGTGAGGATGTGGCGCGGCCAACACAGCGGCTGTGG...GGTGTGCCCGGCAGACACAGCAGGACAGGGCTCTATGTGCGGCCAGGACAGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp GGGCTGTGGTACATGCAGAGGCGGCGGCTGTCCCAGCAGCCTGGCCAGGAGATACCACAGCCGCTGTGTTaGCCGCGCCACATCCTCACA +
Preference number: 4 (lower is better)
Translates to: GLWYMQRRRLSQQPGQEIPQPLC*PRHILT
Trigger: TGTGAGGATGTGGCGCGGCCAACACAGCGGCTGTGG...TATCTCCTGGCCAGGCTGCTGGGACAGCCGCCGCCTCTGCATGTACCACAGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp CGGGTAGAGCCGCCTGTCCTAGGAGAAGCTGTACTCCAGATGCAGTGGGTGACACCAGGCAGCGGCCCGTaGCCCGGCTCACAATGGGGC +
Preference number: 4 (lower is better)
Translates to: RVEPPVLGEAVLQMQWVTPGSGP*PGSQWG
Trigger: GCCCCATTGTGAGCCGGGCCACGGGCCGCTGCCTGG...TGTCACCCACTGCATCTGGAGTACAGCTTCTCCTAGGACAGGCGGCTCTACCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp AAGCAGTCGTGCCAGCCTCCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCCCAGGCAGCGGCCCGTaGCCCGGCTCACAATGGGGC +
Preference number: 4 (lower is better)
Translates to: KQSCQPPRHGLRFVAVHVPGSGP*PGSQWG
Trigger: GCCCCATTGTGAGCCGGGCCACGGGCCGCTGCCTGG...GACATGGACAGCGACAAACCTGAGGCCGTGTCTAGGAGGCTGGCACGACTGCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp CCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCCTCCAGCACCCCTCTTACCCAGGCAGCGGCCCGTaGCCCGGCTCACAATGGGGC +
Preference number: 4 (lower is better)
Translates to: PRHGLRFVAVHVLQHPSYPGSGP*PGSQWG
Trigger: GCCCCATTGTGAGCCGGGCCACGGGCCGCTGCCTGG...GTAAGAGGGGTGCTGGAGGACATGGACAGCGACAAACCTGAGGCCGTGTCTAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp CCTCAGCCTCTGCTGTCCTGGCCGCACATAGAGCCCTGTCCTGCTGTGTCTGCCGTCACTCAGCCACACTaGCTCGGCCCAGCGCCTTCC +
Preference number: 4 (lower is better)
Translates to: PQPLLSWPHIEPCPAVSAVTQPH*LGPAPS
Trigger: GGAAGGCGCTGGGCCGAGCCAGTGTGGCTGAGTGAC...GGCAGACACAGCAGGACAGGGCTCTATGTGCGGCCAGGACAGCAGAGGCTGAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp GTCTTGGTTGGAGGGCTGAGCGGCCGCAAGTGCTGGGGGAGGCTGCTTGGAGCACAGTGGGTGACACCCTaGTCACTCAGCCACACCCCG +
Preference number: 4 (lower is better)
Translates to: VLVGGLSGRKCWGRLLGAQWVTP*SLSHTP
Trigger: CGGGGTGTGGCTGAGTGACCAGGGTGTCACCCACTG...TGCTCCAAGCAGCCTCCCCCAGCACTTGCGGCCGCTCAGCCCTCCAACCAAGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp GTCTTGGTTGGAGGGCTGAGCGGCCGCAAGTGCTGGGGGAGGCTGCTTGGAGCAGCTGTCCCAGCAGCCTaGCCAGGAGATACCGTGGAG +
Preference number: 4 (lower is better)
Translates to: VLVGGLSGRKCWGRLLGAAVPAA*PGDTVE
Trigger: CTCCACGGTATCTCCTGGCCAGGCTGCTGGGACAGC...TGCTCCAAGCAGCCTCCCCCAGCACTTGCGGCCGCTCAGCCCTCCAACCAAGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp CTGCTGTCCTGGCCGCACATAGAGCCCTGTCCTGCTGTGTCTGCCGGGCACACCGCTGTCCCAGCAGCCTaGCCAGGAGATACCGTGGAG +
Preference number: 4 (lower is better)
Translates to: LLSWPHIEPCPAVSAGHTAVPAA*PGDTVE
Trigger: CTCCACGGTATCTCCTGGCCAGGCTGCTGGGACAGC...GGTGTGCCCGGCAGACACAGCAGGACAGGGCTCTATGTGCGGCCAGGACAGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp GGGCTGTGGTACATGCAGAGGCGGCGGCTGTCCCAGCAGCCTGGCCAGGAGATACCTCCCTATGGGGCGTaGGGGGCTGTGGTACATGCA +
Preference number: 4 (lower is better)
Translates to: GLWYMQRRRLSQQPGQEIPPYGA*GAVVHA
Trigger: TGCATGTACCACAGCCCCCCACGCCCCATAGGGAGG...TATCTCCTGGCCAGGCTGCTGGGACAGCCGCCGCCTCTGCATGTACCACAGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp GGGCTGTGGTACATGCAGAGGCGGCGGCTGTCCCAGCAGCCTGGCCAGGAGATAAGGCTGCTTGGAGCATaGGAGGCCTGCGGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: GLWYMQRRRLSQQPGQEIRLLGA*EACGWK
Trigger: CTTCCACCCGCAGGCCTCCCATGCTCCAAGCAGCCT...TATCTCCTGGCCAGGCTGCTGGGACAGCCGCCGCCTCTGCATGTACCACAGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp AGAAGCTGTACTCCAGATGCAGTGGGTGACACCCTGGTCACTCAGCCACACCCCCCTTCCCCGGGATGGTaGAGTCCGCGGCGCCGCCGT +
Preference number: 4 (lower is better)
Translates to: RSCTPDAVGDTLVTQPHPPSPGW*SPRRRR
Trigger: ACGGCGGCGCCGCGGACTCCACCATCCCGGGGAAGG...GGGGTGTGGCTGAGTGACCAGGGTGTCACCCACTGCATCTGGAGTACAGCTTCT
66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000397325.6
ENST00000671997.1
CDS-3UTR CCA 90 bp CGGGTAGAGCCGCCTGTCCTAGGAGAAGCTGTACTCCAGATGCAGTGGGTGACACCTTCCCCGGGATGGTaGAGTCCGCGGCGCCGCCGT +
Preference number: 4 (lower is better)
Translates to: RVEPPVLGEAVLQMQWVTPSPGW*SPRRRR
Trigger: ACGGCGGCGCCGCGGACTCCACCATCCCGGGGAAGG...TGTCACCCACTGCATCTGGAGTACAGCTTCTCCTAGGACAGGCGGCTCTACCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397325.6
ENST00000671997.1
CDS-3UTR CCA 90 bp CGGGTAGAGCCGCCTGTCCTAGGAGAAGCTGTACTCCAGATGCAGTGGGTGACAGCTCCTTCCCCGGGATaGTGGAGTCCGCGGCGCCGC +
Preference number: 4 (lower is better)
Translates to: RVEPPVLGEAVLQMQWVTAPSPG*WSPRRR
Trigger: GCGGCGCCGCGGACTCCACCATCCCGGGGAAGGAGC...TGTCACCCACTGCATCTGGAGTACAGCTTCTCCTAGGACAGGCGGCTCTACCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397325.6
ENST00000671997.1
CDS-3UTR CCA 90 bp CCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCCTCCAGCACCCCTCTTACGCTCCTTCCCCGGGATaGTGGAGTCCGCGGCGCCGC +
Preference number: 4 (lower is better)
Translates to: PRHGLRFVAVHVLQHPSYAPSPG*WSPRRR
Trigger: GCGGCGCCGCGGACTCCACCATCCCGGGGAAGGAGC...GTAAGAGGGGTGCTGGAGGACATGGACAGCGACAAACCTGAGGCCGTGTCTAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397325.6
ENST00000671997.1
CDS-3UTR CCA 90 bp TCGTGCCAGCCTCCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCCTCCAGGCTGTGGGCCTGGCGTaGCCCCAGGGCTCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: SCQPPRHGLRFVAVHVLQAVGLA*PQGSAV
Trigger: CACAGCTGAGCCCTGGGGCCACGCCAGGCCCACAGC...CTGGAGGACATGGACAGCGACAAACCTGAGGCCGTGTCTAGGAGGCTGGCACGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411988.6
ENST00000672816.1
CDS-3UTR TCA 90 bp CCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCCTCCAGCACCCCTCTTACTCCTGGCCACCGCCATaGACACGGCTGCAGCGGGGG +
Preference number: 4 (lower is better)
Translates to: PRHGLRFVAVHVLQHPSYSWPPP*TRLQRG
Trigger: CCCCCGCTGCAGCCGTGTTCATGGCGGTGGCCAGGA...GTAAGAGGGGTGCTGGAGGACATGGACAGCGACAAACCTGAGGCCGTGTCTAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328957.13
ENST00000672944.1
CDS-3UTR TCA 90 bp CGGGCACACCCCGGTCACTCAGCCACACTGGCTCGGCCCAGCGCCTTCCCGAGGCAAACGTGCTGTACTTaGTGTTGTCGATGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: RAHPGHSATLARPSAFPRQTCCT*CCRWLA
Trigger: TGCCAGCCATCGACAACATCAAGTACAGCACGTTTG...CCTCGGGAAGGCGCTGGGCCGAGCCAGTGTGGCTGAGTGACCGGGGTGTGCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328957.13
ENST00000672944.1
CDS-3UTR TCA 90 bp CCTCAGCCTCTGCTGTCCTGGCCGCACATAGAGCCCTGTCCTGCTGTGTCTGCCTCATGGCTGGGGTCCTaGTGGGTGCTGACTCGTCGC +
Preference number: 4 (lower is better)
Translates to: PQPLLSWPHIEPCPAVSASWLGS*WVLTRR
Trigger: GCGACGAGTCAGCACCCATCAGGACCCCAGCCATGA...GGCAGACACAGCAGGACAGGGCTCTATGTGCGGCCAGGACAGCAGAGGCTGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000411988.6
ENST00000672816.1
ENST00000672944.1
CDS-3UTR TCA 90 bp TGTCTGCCGGGCACACCCCGGTCACTCAGCCACACTGGCTCGGCCCAGCGCCTTTCTCCAGGTACCACTTaGAGCTGCGACACTTCAGCC +
Preference number: 4 (lower is better)
Translates to: CLPGTPRSLSHTGSAQRLSPGTT*SCDTSA
Trigger: GGCTGAAGTGTCGCAGCTTCAAGTGGTACCTGGAGA...AAGGCGCTGGGCCGAGCCAGTGTGGCTGAGTGACCGGGGTGTGCCCGGCAGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR TCA 90 bp TGTCTGCCGGGCACACCCCGGTCACTCAGCCACACTGGCTCGGCCCAGCGCCTTGAGAAGGCACGTGTTTaGGTTGGCATCACTGTCCCC +
Preference number: 4 (lower is better)
Translates to: CLPGTPRSLSHTGSAQRLEKARV*VGITVP
Trigger: GGGGACAGTGATGCCAACTCAAACACGTGCCTTCTC...AAGGCGCTGGGCCGAGCCAGTGTGGCTGAGTGACCGGGGTGTGCCCGGCAGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR GCA 90 bp AAGCAGTCGTGCCAGCCTCCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCCACGGTCCCCCAGCGTaGCCACCTTGGCGTGTCGGC +
Preference number: 4 (lower is better)
Translates to: KQSCQPPRHGLRFVAVHVHGPPA*PPWRVG
Trigger: GCCGACACGCCAAGGTGGGCACGCTGGGGGACCGTG...GACATGGACAGCGACAAACCTGAGGCCGTGTCTAGGAGGCTGGCACGACTGCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328957.13
ENST00000672944.1
CDS-3UTR GCA 90 bp GGGCTGTGGTACATGCAGAGGCGGCGGCTGTCCCAGCAGCCTGGCCAGGAGATATGGTTGACCACGCTGTaGACGGAGCGCAGGATGACC +
Preference number: 4 (lower is better)
Translates to: GLWYMQRRRLSQQPGQEIWLTTL*TERRMT
Trigger: GGTCATCCTGCGCTCCGTGCACAGCGTGGTCAACCA...TATCTCCTGGCCAGGCTGCTGGGACAGCCGCCGCCTCTGCATGTACCACAGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328957.13
ENST00000672944.1
CDS-3UTR GCA 90 bp GTCTTGGTTGGAGGGCTGAGCGGCCGCAAGTGCTGGGGGAGGCTGCTTGGAGCACTTCCCGCCGGCTGTTaGGGACAATCTTCACGAGGC +
Preference number: 4 (lower is better)
Translates to: VLVGGLSGRKCWGRLLGALPAGC*GQSSRG
Trigger: GCCTCGTGAAGATTGTCCGCAACAGCCGGCGGGAAG...TGCTCCAAGCAGCCTCCCCCAGCACTTGCGGCCGCTCAGCCCTCCAACCAAGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328957.13
ENST00000672944.1
CDS-3UTR GCA 90 bp CTGCTGTCCTGGCCGCACATAGAGCCCTGTCCTGCTGTGTCTGCCGGGCACACCCGGCGCGCAGGGCGTTaGGCTTGGCATAGTAGTCAA +
Preference number: 4 (lower is better)
Translates to: LLSWPHIEPCPAVSAGHTRRAGR*AWHSSQ
Trigger: TTGACTACTATGCCAAGCGCAACGCCCTGCGCGCCG...GGTGTGCCCGGCAGACACAGCAGGACAGGGCTCTATGTGCGGCCAGGACAGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR GCA 90 bp TGTCTGCCGGGCACACCCCGGTCACTCAGCCACACTGGCTCGGCCCAGCGCCTTCTGATCATCCACTTCTaGCCCGAGCACCTCTGTACC +
Preference number: 4 (lower is better)
Translates to: CLPGTPRSLSHTGSAQRLLIIHF*PEHLCT
Trigger: GGTACAGAGGTGCTCGGGGCAGAAGTGGATGATCAG...AAGGCGCTGGGCCGAGCCAGTGTGGCTGAGTGACCGGGGTGTGCCCGGCAGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR GCA 90 bp CTGCTGTCCTGGCCGCACATAGAGCCCTGTCCTGCTGTGTCTGCCGGGCACACCCGGAGGTGGGGTCAGTaGCGTGCGTGTTTGATCCAG +
Preference number: 4 (lower is better)
Translates to: LLSWPHIEPCPAVSAGHTRRWGQ*RACLIQ
Trigger: CTGGATCAAACACGCACGGCACTGACCCCACCTCCG...GGTGTGCCCGGCAGACACAGCAGGACAGGGCTCTATGTGCGGCCAGGACAGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR GCA 90 bp GGGCTGTGGTACATGCAGAGGCGGCGGCTGTCCCAGCAGCCTGGCCAGGAGATATGGAAGACACCAGGGTaGAGCCTGGTGCATGGTCCG +
Preference number: 4 (lower is better)
Translates to: GLWYMQRRRLSQQPGQEIWKTPG*SLVHGP
Trigger: CGGACCATGCACCAGGCTGCACCCTGGTGTCTTCCA...TATCTCCTGGCCAGGCTGCTGGGACAGCCGCCGCCTCTGCATGTACCACAGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR GCA 90 bp CGGGCACACCCCGGTCACTCAGCCACACTGGCTCGGCCCAGCGCCTTCCCGAGGGGAAGACACACACAGTaGTGCTGCCTAATCCTCTCT +
Preference number: 4 (lower is better)
Translates to: RAHPGHSATLARPSAFPRGRHTQ*CCLILS
Trigger: AGAGAGGATTAGGCAGCAGCACTGTGTGTGTCTTCC...CCTCGGGAAGGCGCTGGGCCGAGCCAGTGTGGCTGAGTGACCGGGGTGTGCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000671997.1
ENST00000672944.1
CDS-3UTR GCA 90 bp TCGTGCCAGCCTCCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCCTCCAGTCCGCGGCGCCGCCGTaGCAGGCTGAAGTTGGCCTT +
Preference number: 4 (lower is better)
Translates to: SCQPPRHGLRFVAVHVLQSAAPP*QAEVGL
Trigger: AAGGCCAACTTCAGCCTGGCACGGCGGCGCCGCGGA...CTGGAGGACATGGACAGCGACAAACCTGAGGCCGTGTCTAGGAGGCTGGCACGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397325.6
ENST00000671997.1
CDS-3UTR CCA 90 bp AAGCAGTCGTGCCAGCCTCCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCATGCGCACGAGCTCCTaGGAGCGGCCCTGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: KQSCQPPRHGLRFVAVHVMRTSS*ERPCRR
Trigger: CCGCCTGCAGGGCCGCTCCCAGGAGCTCGTGCGCAT...GACATGGACAGCGACAAACCTGAGGCCGTGTCTAGGAGGCTGGCACGACTGCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328957.13
ENST00000672944.1
CDS-3UTR CCA 90 bp AGAAGCTGTACTCCAGATGCAGTGGGTGACACCCTGGTCACTCAGCCACACCCCCGACGACTGGGGCGGTaGCCGCCTTCCAGCCCTGCA +
Preference number: 4 (lower is better)
Translates to: RSCTPDAVGDTLVTQPHPRRLGR*PPSSPA
Trigger: TGCAGGGCTGGAAGGCGGCCACCGCCCCAGTCGTCG...GGGGTGTGGCTGAGTGACCAGGGTGTCACCCACTGCATCTGGAGTACAGCTTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328957.13
ENST00000672944.1
CDS-3UTR CCA 90 bp AGAGCCGCCTGTCCTAGGAGAAGCTGTACTCCAGATGCAGTGGGTGACACCCTGCTGGTGCGCTCGATGTaGGCCACGCGGGAGCAGGGC +
Preference number: 4 (lower is better)
Translates to: RAACPRRSCTPDAVGDTLLVRSM*ATREQG
Trigger: GCCCTGCTCCCGCGTGGCCCACATCGAGCGCACCAG...CAGGGTGTCACCCACTGCATCTGGAGTACAGCTTCTCCTAGGACAGGCGGCTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp CCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCCTCCAGCACCCCTCTTACCTGGTGCGCTCGATGTaGGCCACGCGGGAGCAGGGC +
Preference number: 4 (lower is better)
Translates to: PRHGLRFVAVHVLQHPSYLVRSM*ATREQG
Trigger: GCCCTGCTCCCGCGTGGCCCACATCGAGCGCACCAG...GTAAGAGGGGTGCTGGAGGACATGGACAGCGACAAACCTGAGGCCGTGTCTAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp CTGCTGTCCTGGCCGCACATAGAGCCCTGTCCTGCTGTGTCTGCCGGGCACACCACAATGGGGCCACTCTaGGTGAAGTCCCACAGCCGC +
Preference number: 4 (lower is better)
Translates to: LLSWPHIEPCPAVSAGHTTMGPL*VKSHSR
Trigger: GCGGCTGTGGGACTTCACCCAGAGTGGCCCCATTGT...GGTGTGCCCGGCAGACACAGCAGGACAGGGCTCTATGTGCGGCCAGGACAGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp AGAAGCTGTACTCCAGATGCAGTGGGTGACACCCTGGTCACTCAGCCACACCCCGGGTCCGGGCGGAGGTaGGGTCAGTGCCGTGCGTGT +
Preference number: 4 (lower is better)
Translates to: RSCTPDAVGDTLVTQPHPGSGRR*GQCRAC
Trigger: ACACGCACGGCACTGACCCCACCTCCGCCCGGACCC...GGGGTGTGGCTGAGTGACCAGGGTGTCACCCACTGCATCTGGAGTACAGCTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp AGAGCCGCCTGTCCTAGGAGAAGCTGTACTCCAGATGCAGTGGGTGACACCCTGGGGTCCGGGCGGAGGTaGGGTCAGTGCCGTGCGTGT +
Preference number: 4 (lower is better)
Translates to: RAACPRRSCTPDAVGDTLGSGRR*GQCRAC
Trigger: ACACGCACGGCACTGACCCCACCTCCGCCCGGACCC...CAGGGTGTCACCCACTGCATCTGGAGTACAGCTTCTCCTAGGACAGGCGGCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp GGGCTGTGGTACATGCAGAGGCGGCGGCTGTCCCAGCAGCCTGGCCAGGAGATACAGCCTCTGCTGTCCTaGCCGCACATAGAGCCCTGT +
Preference number: 4 (lower is better)
Translates to: GLWYMQRRRLSQQPGQEIQPLLS*PHIEPC
Trigger: ACAGGGCTCTATGTGCGGCCAGGACAGCAGAGGCTG...TATCTCCTGGCCAGGCTGCTGGGACAGCCGCCGCCTCTGCATGTACCACAGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp GTCTTGGTTGGAGGGCTGAGCGGCCGCAAGTGCTGGGGGAGGCTGCTTGGAGCACAGCCTCTGCTGTCCTaGCCGCACATAGAGCCCTGT +
Preference number: 4 (lower is better)
Translates to: VLVGGLSGRKCWGRLLGAQPLLS*PHIEPC
Trigger: ACAGGGCTCTATGTGCGGCCAGGACAGCAGAGGCTG...TGCTCCAAGCAGCCTCCCCCAGCACTTGCGGCCGCTCAGCCCTCCAACCAAGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp TGTCTGCCGGGCACACCCCGGTCACTCAGCCACACTGGCTCGGCCCAGCGCCTTGTACTCCAGATGCAGTaGGTGACACCCTGGTCACTC +
Preference number: 4 (lower is better)
Translates to: CLPGTPRSLSHTGSAQRLVLQMQ*VTPWSL
Trigger: GAGTGACCAGGGTGTCACCCACTGCATCTGGAGTAC...AAGGCGCTGGGCCGAGCCAGTGTGGCTGAGTGACCGGGGTGTGCCCGGCAGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp CAGCCTCCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCCTCCAGCACCCCAGCCCTGCCCTTCGCTaGAAGGGGCCGGAACGAAGG +
Preference number: 4 (lower is better)
Translates to: QPPRHGLRFVAVHVLQHPSPALR*KGPERR
Trigger: CCTTCGTTCCGGCCCCTTCCAGCGAAGGGCAGGGCT...GGGGTGCTGGAGGACATGGACAGCGACAAACCTGAGGCCGTGTCTAGGAGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397325.6
ENST00000671997.1
CDS-3UTR CCA 90 bp CCTCAGCCTCTGCTGTCCTGGCCGCACATAGAGCCCTGTCCTGCTGTGTCTGCCCTCGGCTGTGCTCTATaGGCCTCGGACCTGCTCCTC +
Preference number: 4 (lower is better)
Translates to: PQPLLSWPHIEPCPAVSALGCAL*ASDLLL
Trigger: GAGGAGCAGGTCCGAGGCCCATAGAGCACAGCCGAG...GGCAGACACAGCAGGACAGGGCTCTATGTGCGGCCAGGACAGCAGAGGCTGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411988.6
ENST00000672816.1
CDS-3UTR TCA 90 bp CTGCTGTCCTGGCCGCACATAGAGCCCTGTCCTGCTGTGTCTGCCGGGCACACCGCTTGGCAAGGCCGTTaGGCTGGTTGTAGACCACCT +
Preference number: 4 (lower is better)
Translates to: LLSWPHIEPCPAVSAGHTAWQGR*AGCRPP
Trigger: AGGTGGTCTACAACCAGCTCAACGGCCTTGCCAAGC...GGTGTGCCCGGCAGACACAGCAGGACAGGGCTCTATGTGCGGCCAGGACAGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328957.13
ENST00000672944.1
CDS-3UTR TCA 90 bp AGAGCCGCCTGTCCTAGGAGAAGCTGTACTCCAGATGCAGTGGGTGACACCCTGGGGAGGGCGTGTGGTTaGCCACGCTGTGCACGGAGC +
Preference number: 4 (lower is better)
Translates to: RAACPRRSCTPDAVGDTLGRACG*PRCARS
Trigger: GCTCCGTGCACAGCGTGGTCAACCACACGCCCTCCC...CAGGGTGTCACCCACTGCATCTGGAGTACAGCTTCTCCTAGGACAGGCGGCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328957.13
ENST00000672944.1
CDS-3UTR TCA 90 bp AGAAGCTGTACTCCAGATGCAGTGGGTGACACCCTGGTCACTCAGCCACACCCCGGGAGGGCGTGTGGTTaGCCACGCTGTGCACGGAGC +
Preference number: 4 (lower is better)
Translates to: RSCTPDAVGDTLVTQPHPGRACG*PRCARS
Trigger: GCTCCGTGCACAGCGTGGTCAACCACACGCCCTCCC...GGGGTGTGGCTGAGTGACCAGGGTGTCACCCACTGCATCTGGAGTACAGCTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328957.13
ENST00000672944.1
CDS-3UTR TCA 90 bp AGAGCCGCCTGTCCTAGGAGAAGCTGTACTCCAGATGCAGTGGGTGACACCCTGGGTCCTGATGGGTGCTaGCTCGTCGCCGCGGTCCAG +
Preference number: 4 (lower is better)
Translates to: RAACPRRSCTPDAVGDTLGPDGC*LVAAVQ
Trigger: CTGGACCGCGGCGACGAGTCAGCACCCATCAGGACC...CAGGGTGTCACCCACTGCATCTGGAGTACAGCTTCTCCTAGGACAGGCGGCTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000411988.6
ENST00000672816.1
ENST00000672944.1
CDS-3UTR TCA 90 bp CCTCAGCCTCTGCTGTCCTGGCCGCACATAGAGCCCTGTCCTGCTGTGTCTGCCTCCAGATGCAGTGGGTaGCACCCTGGTCACTCAGCC +
Preference number: 4 (lower is better)
Translates to: PQPLLSWPHIEPCPAVSASRCSG*HPGHSA
Trigger: GGCTGAGTGACCAGGGTGTCACCCACTGCATCTGGA...GGCAGACACAGCAGGACAGGGCTCTATGTGCGGCCAGGACAGCAGAGGCTGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR TCA 90 bp GGGGAGGCTGCTTGGAGCATGGGAGGCCTGCGGGTGGAAGACACCAGGGTGCAGGAGAAGGCACGTGTTTaGGTTGGCATCACTGTCCCC +
Preference number: 4 (lower is better)
Translates to: GEAAWSMGGLRVEDTRVQEKARV*VGITVP
Trigger: GGGGACAGTGATGCCAACTCAAACACGTGCCTTCTC...CTGCACCCTGGTGTCTTCCACCCGCAGGCCTCCCATGCTCCAAGCAGCCTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR GCA 90 bp TCGTGCCAGCCTCCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCCTCCAGTGGCTGGCAGCACGATaGGACGCCGGTCCTCTCGGA +
Preference number: 4 (lower is better)
Translates to: SCQPPRHGLRFVAVHVLQWLAAR*DAGPLG
Trigger: TCCGAGAGGACCGGCGTCGCATCGTGCTGCCAGCCA...CTGGAGGACATGGACAGCGACAAACCTGAGGCCGTGTCTAGGAGGCTGGCACGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328957.13
ENST00000672944.1
CDS-3UTR GCA 90 bp CCTCAGCCTCTGCTGTCCTGGCCGCACATAGAGCCCTGTCCTGCTGTGTCTGCCCATAGAGCCCTGTCCTaGTGTGTCTGCCGGGCACAC +
Preference number: 4 (lower is better)
Translates to: PQPLLSWPHIEPCPAVSAHRALS*CVCRAH
Trigger: GTGTGCCCGGCAGACACAGCAGGACAGGGCTCTATG...GGCAGACACAGCAGGACAGGGCTCTATGTGCGGCCAGGACAGCAGAGGCTGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR GCA 90 bp CGGGTAGAGCCGCCTGTCCTAGGAGAAGCTGTACTCCAGATGCAGTGGGTGACAGGGGGCTGTGGTACATaGAGAGGCGGCGGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: RVEPPVLGEAVLQMQWVTGGCGT*RGGGCP
Trigger: GGGACAGCCGCCGCCTCTGCATGTACCACAGCCCCC...TGTCACCCACTGCATCTGGAGTACAGCTTCTCCTAGGACAGGCGGCTCTACCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR GCA 90 bp AGAGCCGCCTGTCCTAGGAGAAGCTGTACTCCAGATGCAGTGGGTGACACCCTGGGGGGCTGTGGTACATaGAGAGGCGGCGGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: RAACPRRSCTPDAVGDTLGGCGT*RGGGCP
Trigger: GGGACAGCCGCCGCCTCTGCATGTACCACAGCCCCC...CAGGGTGTCACCCACTGCATCTGGAGTACAGCTTCTCCTAGGACAGGCGGCTCT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR GCA 90 bp AGAAGCTGTACTCCAGATGCAGTGGGTGACACCCTGGTCACTCAGCCACACCCCGGGGGCTGTGGTACATaGAGAGGCGGCGGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: RSCTPDAVGDTLVTQPHPGGCGT*RGGGCP
Trigger: GGGACAGCCGCCGCCTCTGCATGTACCACAGCCCCC...GGGGTGTGGCTGAGTGACCAGGGTGTCACCCACTGCATCTGGAGTACAGCTTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR GCA 90 bp TCGTGCCAGCCTCCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCCTCCAGTCCAGTCGCTGGCAGTaGTGCTGTGGGCCTGGCGTG +
Preference number: 4 (lower is better)
Translates to: SCQPPRHGLRFVAVHVLQSSRWQ*CCGPGV
Trigger: CACGCCAGGCCCACAGCAGCACTGCCAGCGACTGGA...CTGGAGGACATGGACAGCGACAAACCTGAGGCCGTGTCTAGGAGGCTGGCACGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411988.6
ENST00000672816.1
CDS-3UTR CCA 90 bp CCTGGCCAGGAGATACCGTGGAGAAGGCACGTGTTTGAGTTGGCATCACTGTCCCCAGCGTGCCCACCTTaGCGTGTCGGCTGCGCACCC +
Preference number: 4 (lower is better)
Translates to: PGQEIPWRRHVFELASLSPACPP*RVGCAP
Trigger: GGGTGCGCAGCCGACACGCCAAGGTGGGCACGCTGG...GGACAGTGATGCCAACTCAAACACGTGCCTTCTCCACGGTATCTCCTGGCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328957.13
ENST00000672944.1
CDS-3UTR CCA 90 bp CGGGTAGAGCCGCCTGTCCTAGGAGAAGCTGTACTCCAGATGCAGTGGGTGACACGTCATCACGCAGGGTaGCCGCCAAGCCACCCTGGC +
Preference number: 4 (lower is better)
Translates to: RVEPPVLGEAVLQMQWVTRHHAG*PPSHPG
Trigger: GCCAGGGTGGCTTGGCGGCCACCCTGCGTGATGACG...TGTCACCCACTGCATCTGGAGTACAGCTTCTCCTAGGACAGGCGGCTCTACCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328957.13
ENST00000672944.1
CDS-3UTR CCA 90 bp CCTCAGCCTCTGCTGTCCTGGCCGCACATAGAGCCCTGTCCTGCTGTGTCTGCCGATGTTGTCGATGGCTaGCAGCACGATGCGACGCCG +
Preference number: 4 (lower is better)
Translates to: PQPLLSWPHIEPCPAVSADVVDG*QHDATP
Trigger: CGGCGTCGCATCGTGCTGCCAGCCATCGACAACATC...GGCAGACACAGCAGGACAGGGCTCTATGTGCGGCCAGGACAGCAGAGGCTGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328957.13
ENST00000672944.1
CDS-3UTR CCA 90 bp GGGCTGTGGTACATGCAGAGGCGGCGGCTGTCCCAGCAGCCTGGCCAGGAGATACCCCTGGGTTCGACATaGGGATGTTCCAGGCCATGT +
Preference number: 4 (lower is better)
Translates to: GLWYMQRRRLSQQPGQEIPLGST*GCSRPC
Trigger: ACATGGCCTGGAACATCCCCATGTCGAACCCAGGGG...TATCTCCTGGCCAGGCTGCTGGGACAGCCGCCGCCTCTGCATGTACCACAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp CAGCCTCCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCCTCCAGCACCCCCTGTACCGCACCAGCTaGGAGGACATCCCGTGGCAG +
Preference number: 4 (lower is better)
Translates to: QPPRHGLRFVAVHVLQHPLYRTS*EDIPWQ
Trigger: CTGCCACGGGATGTCCTCCCAGCTGGTGCGGTACAG...GGGGTGCTGGAGGACATGGACAGCGACAAACCTGAGGCCGTGTCTAGGAGGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp CAGCCTCCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCCTCCAGCACCCCCCACAGCCGCTGTGTTaGCCGCGCCACATCCTCACA +
Preference number: 4 (lower is better)
Translates to: QPPRHGLRFVAVHVLQHPPQPLC*PRHILT
Trigger: TGTGAGGATGTGGCGCGGCCAACACAGCGGCTGTGG...GGGGTGCTGGAGGACATGGACAGCGACAAACCTGAGGCCGTGTCTAGGAGGCTG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp GGGGCTGTGGTACATGCAGAGGCGGCGGCTGTCCCAGCAGCCTGGCCAGGAGATGGCACGTGTTTGAGTTaGCATCACTGTCCCCAGACG +
Preference number: 4 (lower is better)
Translates to: GAVVHAEAAAVPAAWPGDGTCLS*HHCPQT
Trigger: CGTCTGGGGACAGTGATGCCAACTCAAACACGTGCC...ATCTCCTGGCCAGGCTGCTGGGACAGCCGCCGCCTCTGCATGTACCACAGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp GGGGAGGCTGCTTGGAGCATGGGAGGCCTGCGGGTGGAAGACACCAGGGTGCAGGGCCAGGAGATACCGTaGAGAAGGCACGTGTTTGAG +
Preference number: 4 (lower is better)
Translates to: GEAAWSMGGLRVEDTRVQGQEIP*RRHVFE
Trigger: CTCAAACACGTGCCTTCTCCACGGTATCTCCTGGCC...CTGCACCCTGGTGTCTTCCACCCGCAGGCCTCCCATGCTCCAAGCAGCCTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp CAGCCTCCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCCTCCAGCACCCCGCTGTCCCAGCAGCCTaGCCAGGAGATACCGTGGAG +
Preference number: 4 (lower is better)
Translates to: QPPRHGLRFVAVHVLQHPAVPAA*PGDTVE
Trigger: CTCCACGGTATCTCCTGGCCAGGCTGCTGGGACAGC...GGGGTGCTGGAGGACATGGACAGCGACAAACCTGAGGCCGTGTCTAGGAGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp CCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCCTCCAGCACCCCTCTTACGCATGGTCCGGGGCTTaGCCTCCCTATGGGGCGTGG +
Preference number: 4 (lower is better)
Translates to: PRHGLRFVAVHVLQHPSYAWSGA*PPYGAW
Trigger: CCACGCCCCATAGGGAGGCCAAGCCCCGGACCATGC...GTAAGAGGGGTGCTGGAGGACATGGACAGCGACAAACCTGAGGCCGTGTCTAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp AGAGCCGCCTGTCCTAGGAGAAGCTGTACTCCAGATGCAGTGGGTGACACCCTGGCATGGTCCGGGGCTTaGCCTCCCTATGGGGCGTGG +
Preference number: 4 (lower is better)
Translates to: RAACPRRSCTPDAVGDTLAWSGA*PPYGAW
Trigger: CCACGCCCCATAGGGAGGCCAAGCCCCGGACCATGC...CAGGGTGTCACCCACTGCATCTGGAGTACAGCTTCTCCTAGGACAGGCGGCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp TCGTGCCAGCCTCCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCCTCCAGAGCGGCCGCAAGTGCTaGGGGAGGCTGCTTGGAGCA +
Preference number: 4 (lower is better)
Translates to: SCQPPRHGLRFVAVHVLQSGRKC*GRLLGA
Trigger: TGCTCCAAGCAGCCTCCCCCAGCACTTGCGGCCGCT...CTGGAGGACATGGACAGCGACAAACCTGAGGCCGTGTCTAGGAGGCTGGCACGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp GTCTTGGTTGGAGGGCTGAGCGGCCGCAAGTGCTGGGGGAGGCTGCTTGGAGCAGACTTAGGTCTTGGTTaGAGGGCTGAGCGGCCGCAA +
Preference number: 4 (lower is better)
Translates to: VLVGGLSGRKCWGRLLGADLGLG*RAERPQ
Trigger: TTGCGGCCGCTCAGCCCTCCAACCAAGACCTAAGTC...TGCTCCAAGCAGCCTCCCCCAGCACTTGCGGCCGCTCAGCCCTCCAACCAAGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR TCA 90 bp TGTCTGCCGGGCACACCCCGGTCACTCAGCCACACTGGCTCGGCCCAGCGCCTTCAAACGTGCTGTACTTaGTGTTGTCGATGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: CLPGTPRSLSHTGSAQRLQTCCT*CCRWLA
Trigger: TGCCAGCCATCGACAACATCAAGTACAGCACGTTTG...AAGGCGCTGGGCCGAGCCAGTGTGGCTGAGTGACCGGGGTGTGCCCGGCAGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328957.13
ENST00000672944.1
CDS-3UTR TCA 90 bp TCGTGCCAGCCTCCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCCTCCAGTCATGGCTGGGGTCCTaGTGGGTGCTGACTCGTCGC +
Preference number: 4 (lower is better)
Translates to: SCQPPRHGLRFVAVHVLQSWLGS*WVLTRR
Trigger: GCGACGAGTCAGCACCCATCAGGACCCCAGCCATGA...CTGGAGGACATGGACAGCGACAAACCTGAGGCCGTGTCTAGGAGGCTGGCACGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000411988.6
ENST00000672816.1
ENST00000672944.1
CDS-3UTR TCA 90 bp GGGCTGTGGTACATGCAGAGGCGGCGGCTGTCCCAGCAGCCTGGCCAGGAGATATCTCCAGGTACCACTTaGAGCTGCGACACTTCAGCC +
Preference number: 4 (lower is better)
Translates to: GLWYMQRRRLSQQPGQEISPGTT*SCDTSA
Trigger: GGCTGAAGTGTCGCAGCTTCAAGTGGTACCTGGAGA...TATCTCCTGGCCAGGCTGCTGGGACAGCCGCCGCCTCTGCATGTACCACAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR TCA 90 bp GTCTTGGTTGGAGGGCTGAGCGGCCGCAAGTGCTGGGGGAGGCTGCTTGGAGCATCACCTCTCCGTACGTaGGGGTGTTGTTGTAGACCC +
Preference number: 4 (lower is better)
Translates to: VLVGGLSGRKCWGRLLGASPLRT*GCCCRP
Trigger: GGGTCTACAACAACACCCTCACGTACGGAGAGGTGA...TGCTCCAAGCAGCCTCCCCCAGCACTTGCGGCCGCTCAGCCCTCCAACCAAGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR TCA 90 bp AAGCAGTCGTGCCAGCCTCCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCTGGGGCCACTCTGGGTaGAGTCCCACAGCCGCTGTG +
Preference number: 4 (lower is better)
Translates to: KQSCQPPRHGLRFVAVHVWGHSG*SPTAAV
Trigger: CACAGCGGCTGTGGGACTTCACCCAGAGTGGCCCCA...GACATGGACAGCGACAAACCTGAGGCCGTGTCTAGGAGGCTGGCACGACTGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR TCA 90 bp CCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCCTCCAGCACCCCTCTTACTCTTGGTTGGAGGGCTaGGCGGCCGCAAGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: PRHGLRFVAVHVLQHPSYSWLEG*AAASAG
Trigger: CCCAGCACTTGCGGCCGCTCAGCCCTCCAACCAAGA...GTAAGAGGGGTGCTGGAGGACATGGACAGCGACAAACCTGAGGCCGTGTCTAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR TCA 90 bp CGGGTAGAGCCGCCTGTCCTAGGAGAAGCTGTACTCCAGATGCAGTGGGTGACATCTTGGTTGGAGGGCTaGGCGGCCGCAAGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: RVEPPVLGEAVLQMQWVTSWLEG*AAASAG
Trigger: CCCAGCACTTGCGGCCGCTCAGCCCTCCAACCAAGA...TGTCACCCACTGCATCTGGAGTACAGCTTCTCCTAGGACAGGCGGCTCTACCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR GCA 90 bp AAACTGTATTTATTAAAACAGGCAAGGGGCTGGGCTGCGGCAGGGCCCAGGTGCCACGGTCCCCCAGCGTaGCCACCTTGGCGTGTCGGC +
Preference number: 4 (lower is better)
Translates to: KLYLLKQARGWAAAGPRCHGPPA*PPWRVG
Trigger: GCCGACACGCCAAGGTGGGCACGCTGGGGGACCGTG...GCACCTGGGCCCTGCCGCAGCCCAGCCCCTTGCCTGTTTTAATAAATACAGTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000328957.13
ENST00000672944.1
CDS-3UTR GCA 90 bp AGAAGCTGTACTCCAGATGCAGTGGGTGACACCCTGGTCACTCAGCCACACCCCAGGTGGTCCAGGCGCTaGAGGATGGCCTCACGGTCC +
Preference number: 4 (lower is better)
Translates to: RSCTPDAVGDTLVTQPHPRWSRR*RMASRS
Trigger: GGACCGTGAGGCCATCCTGCAGCGCCTGGACCACCT...GGGGTGTGGCTGAGTGACCAGGGTGTCACCCACTGCATCTGGAGTACAGCTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328957.13
ENST00000672944.1
CDS-3UTR GCA 90 bp AGAAGCTGTACTCCAGATGCAGTGGGTGACACCCTGGTCACTCAGCCACACCCCTGGCTGGCAGCACGATaGGACGCCGGTCCTCTCGGA +
Preference number: 4 (lower is better)
Translates to: RSCTPDAVGDTLVTQPHPWLAAR*DAGPLG
Trigger: TCCGAGAGGACCGGCGTCGCATCGTGCTGCCAGCCA...GGGGTGTGGCTGAGTGACCAGGGTGTCACCCACTGCATCTGGAGTACAGCTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328957.13
ENST00000672944.1
CDS-3UTR GCA 90 bp CGGGTAGAGCCGCCTGTCCTAGGAGAAGCTGTACTCCAGATGCAGTGGGTGACACCCAGAGGCCCCAGCTaGAGCAGTCCATCAGCGCTG +
Preference number: 4 (lower is better)
Translates to: RVEPPVLGEAVLQMQWVTPRGPS*SSPSAL
Trigger: CAGCGCTGATGGACTGCTGCAGCTGGGGCCTCTGGG...TGTCACCCACTGCATCTGGAGTACAGCTTCTCCTAGGACAGGCGGCTCTACCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR GCA 90 bp TCGTGCCAGCCTCCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCCTCCAGTCTTCAGGGTGGGCATaGGGCCCGTGCCGTCATCCA +
Preference number: 4 (lower is better)
Translates to: SCQPPRHGLRFVAVHVLQSSGWA*GPCRHP
Trigger: TGGATGACGGCACGGGCCGCATGCCCACCCTGAAGA...CTGGAGGACATGGACAGCGACAAACCTGAGGCCGTGTCTAGGAGGCTGGCACGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR GCA 90 bp GTCTTGGTTGGAGGGCTGAGCGGCCGCAAGTGCTGGGGGAGGCTGCTTGGAGCACTGATCATCCACTTCTaGCCCGAGCACCTCTGTACC +
Preference number: 4 (lower is better)
Translates to: VLVGGLSGRKCWGRLLGALIIHF*PEHLCT
Trigger: GGTACAGAGGTGCTCGGGGCAGAAGTGGATGATCAG...TGCTCCAAGCAGCCTCCCCCAGCACTTGCGGCCGCTCAGCCCTCCAACCAAGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR GCA 90 bp CCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCCTCCAGCACCCCTCTTACCTGTCCTGCTGTGTCTaGCGGGCACACCCCGGTCAC +
Preference number: 4 (lower is better)
Translates to: PRHGLRFVAVHVLQHPSYLSCCV*RAHPGH
Trigger: GTGACCGGGGTGTGCCCGGCAGACACAGCAGGACAG...GTAAGAGGGGTGCTGGAGGACATGGACAGCGACAAACCTGAGGCCGTGTCTAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR GCA 90 bp CGGGTAGAGCCGCCTGTCCTAGGAGAAGCTGTACTCCAGATGCAGTGGGTGACACTGTCCTGCTGTGTCTaGCGGGCACACCCCGGTCAC +
Preference number: 4 (lower is better)
Translates to: RVEPPVLGEAVLQMQWVTLSCCV*RAHPGH
Trigger: GTGACCGGGGTGTGCCCGGCAGACACAGCAGGACAG...TGTCACCCACTGCATCTGGAGTACAGCTTCTCCTAGGACAGGCGGCTCTACCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR GCA 90 bp AGAGCCGCCTGTCCTAGGAGAAGCTGTACTCCAGATGCAGTGGGTGACACCCTGCTGTCCTGCTGTGTCTaGCGGGCACACCCCGGTCAC +
Preference number: 4 (lower is better)
Translates to: RAACPRRSCTPDAVGDTLLSCCV*RAHPGH
Trigger: GTGACCGGGGTGTGCCCGGCAGACACAGCAGGACAG...CAGGGTGTCACCCACTGCATCTGGAGTACAGCTTCTCCTAGGACAGGCGGCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR GCA 90 bp AGAGCCGCCTGTCCTAGGAGAAGCTGTACTCCAGATGCAGTGGGTGACACCCTGCTGAGCGGCCGCAAGTaGTGGGGGAGGCTGCTTGGA +
Preference number: 4 (lower is better)
Translates to: RAACPRRSCTPDAVGDTLLSGRK*WGRLLG
Trigger: TCCAAGCAGCCTCCCCCAGCACTTGCGGCCGCTCAG...CAGGGTGTCACCCACTGCATCTGGAGTACAGCTTCTCCTAGGACAGGCGGCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR GCA 90 bp CCTGGCCAGGAGATACCGTGGAGAAGGCACGTGTTTGAGTTGGCATCACTGTCCCTCTGCTCGGAGCCCTaGCCTTCGCTGGAAGGGGCC +
Preference number: 4 (lower is better)
Translates to: PGQEIPWRRHVFELASLSLCSEP*PSLEGA
Trigger: GGCCCCTTCCAGCGAAGGGCAGGGCTCCGAGCAGAG...GGACAGTGATGCCAACTCAAACACGTGCCTTCTCCACGGTATCTCCTGGCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397325.6
ENST00000671997.1
CDS-3UTR GCA 90 bp CGGGTAGAGCCGCCTGTCCTAGGAGAAGCTGTACTCCAGATGCAGTGGGTGACAATGCTGCCGCCACACTaGCACACAGGGGTCCGGCTC +
Preference number: 4 (lower is better)
Translates to: RVEPPVLGEAVLQMQWVTMLPPH*HTGVRL
Trigger: GAGCCGGACCCCTGTGTGGCAGTGTGGCGGCAGCAT...TGTCACCCACTGCATCTGGAGTACAGCTTCTCCTAGGACAGGCGGCTCTACCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397325.6
ENST00000671997.1
CDS-3UTR GCA 90 bp CCTCAGCCTCTGCTGTCCTGGCCGCACATAGAGCCCTGTCCTGCTGTGTCTGCCTATGGGCCTCGGACCTaGTCCTCTTCACTCTCTGCC +
Preference number: 4 (lower is better)
Translates to: PQPLLSWPHIEPCPAVSAYGPRT*SSSLSA
Trigger: GGCAGAGAGTGAAGAGGAGCAGGTCCGAGGCCCATA...GGCAGACACAGCAGGACAGGGCTCTATGTGCGGCCAGGACAGCAGAGGCTGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411988.6
ENST00000672816.1
CDS-3UTR CCA 90 bp CCTCAGCCTCTGCTGTCCTGGCCGCACATAGAGCCCTGTCCTGCTGTGTCTGCCTGTTGTAGGGCTTCCTaGTGCGCTCGATGTGGGCCA +
Preference number: 4 (lower is better)
Translates to: PQPLLSWPHIEPCPAVSACCRAS*CARCGP
Trigger: TGGCCCACATCGAGCGCACCAGGAAGCCCTACAACA...GGCAGACACAGCAGGACAGGGCTCTATGTGCGGCCAGGACAGCAGAGGCTGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp CCTCAGCCTCTGCTGTCCTGGCCGCACATAGAGCCCTGTCCTGCTGTGTCTGCCCCCCTGGGTTCGACATaGGGATGTTCCAGGCCATGT +
Preference number: 4 (lower is better)
Translates to: PQPLLSWPHIEPCPAVSAPLGST*GCSRPC
Trigger: ACATGGCCTGGAACATCCCCATGTCGAACCCAGGGG...GGCAGACACAGCAGGACAGGGCTCTATGTGCGGCCAGGACAGCAGAGGCTGAGG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp CCTCAGCCTCTGCTGTCCTGGCCGCACATAGAGCCCTGTCCTGCTGTGTCTGCCCCCGAAGTCCACCCCTaGGTTCGACATGGGGATGTT +
Preference number: 4 (lower is better)
Translates to: PQPLLSWPHIEPCPAVSAPEVHP*VRHGDV
Trigger: AACATCCCCATGTCGAACCCAGGGGTGGACTTCGGG...GGCAGACACAGCAGGACAGGGCTCTATGTGCGGCCAGGACAGCAGAGGCTGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp GGGGAGGCTGCTTGGAGCATGGGAGGCCTGCGGGTGGAAGACACCAGGGTGCAGCATCCACCAGACACTTaGAGTCAGGCAAGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: GEAAWSMGGLRVEDTRVQHPPDT*SQARRL
Trigger: CAGCCTTCTTGCCTGACTCCAAGTGTCTGGTGGATG...CTGCACCCTGGTGTCTTCCACCCGCAGGCCTCCCATGCTCCAAGCAGCCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp TCGTGCCAGCCTCCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCCTCCAGCCACAGCCGCTGTGTTaGCCGCGCCACATCCTCACA +
Preference number: 4 (lower is better)
Translates to: SCQPPRHGLRFVAVHVLQPQPLC*PRHILT
Trigger: TGTGAGGATGTGGCGCGGCCAACACAGCGGCTGTGG...CTGGAGGACATGGACAGCGACAAACCTGAGGCCGTGTCTAGGAGGCTGGCACGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp CAGCCTCCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCCTCCAGCACCCCACAATGGGGCCACTCTaGGTGAAGTCCCACAGCCGC +
Preference number: 4 (lower is better)
Translates to: QPPRHGLRFVAVHVLQHPTMGPL*VKSHSR
Trigger: GCGGCTGTGGGACTTCACCCAGAGTGGCCCCATTGT...GGGGTGCTGGAGGACATGGACAGCGACAAACCTGAGGCCGTGTCTAGGAGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp AAACTGTATTTATTAAAACAGGCAAGGGGCTGGGCTGCGGCAGGGCCCAGGTGCGGGTCCGGGCGGAGGTaGGGTCAGTGCCGTGCGTGT +
Preference number: 4 (lower is better)
Translates to: KLYLLKQARGWAAAGPRCGSGRR*GQCRAC
Trigger: ACACGCACGGCACTGACCCCACCTCCGCCCGGACCC...GCACCTGGGCCCTGCCGCAGCCCAGCCCCTTGCCTGTTTTAATAAATACAGTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000671997.1
ENST00000672944.1
CDS-3UTR CCA 90 bp GTCTTGGTTGGAGGGCTGAGCGGCCGCAAGTGCTGGGGGAGGCTGCTTGGAGCAGTACTCCAGATGCAGTaGGTGACACCCTGGTCACTC +
Preference number: 4 (lower is better)
Translates to: VLVGGLSGRKCWGRLLGAVLQMQ*VTPWSL
Trigger: GAGTGACCAGGGTGTCACCCACTGCATCTGGAGTAC...TGCTCCAAGCAGCCTCCCCCAGCACTTGCGGCCGCTCAGCCCTCCAACCAAGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp GTCTTGGTTGGAGGGCTGAGCGGCCGCAAGTGCTGGGGGAGGCTGCTTGGAGCAGGCACGTGTTTGAGTTaGCATCACTGTCCCCAGACG +
Preference number: 4 (lower is better)
Translates to: VLVGGLSGRKCWGRLLGAGTCLS*HHCPQT
Trigger: CGTCTGGGGACAGTGATGCCAACTCAAACACGTGCC...TGCTCCAAGCAGCCTCCCCCAGCACTTGCGGCCGCTCAGCCCTCCAACCAAGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp GTCTTGGTTGGAGGGCTGAGCGGCCGCAAGTGCTGGGGGAGGCTGCTTGGAGCAGGCCAGGAGATACCGTaGAGAAGGCACGTGTTTGAG +
Preference number: 4 (lower is better)
Translates to: VLVGGLSGRKCWGRLLGAGQEIP*RRHVFE
Trigger: CTCAAACACGTGCCTTCTCCACGGTATCTCCTGGCC...TGCTCCAAGCAGCCTCCCCCAGCACTTGCGGCCGCTCAGCCCTCCAACCAAGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp ACTGTATTTATTAAAACAGGCAAGGGGCTGGGCTGCGGCAGGGCCCAGGTGCCTGTGCAGCCTGGTGCATaGTCCGGGGCTTGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: TVFIKTGKGLGCGRAQVPVQPGA*SGAWPP
Trigger: GGGAGGCCAAGCCCCGGACCATGCACCAGGCTGCAC...AGGCACCTGGGCCCTGCCGCAGCCCAGCCCCTTGCCTGTTTTAATAAATACAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000671997.1
ENST00000672944.1
CDS-3UTR CCA 90 bp AGAAGCTGTACTCCAGATGCAGTGGGTGACACCCTGGTCACTCAGCCACACCCCCACCAGGGTGCAGCCTaGTGCATGGTCCGGGGCTTG +
Preference number: 4 (lower is better)
Translates to: RSCTPDAVGDTLVTQPHPHQGAA*CMVRGL
Trigger: CAAGCCCCGGACCATGCACCAGGCTGCACCCTGGTG...GGGGTGTGGCTGAGTGACCAGGGTGTCACCCACTGCATCTGGAGTACAGCTTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp AAGCAGTCGTGCCAGCCTCCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCTGGGAGGCCTGCGGGTaGAAGACACCAGGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: KQSCQPPRHGLRFVAVHVWEACG*KTPGCS
Trigger: GCTGCACCCTGGTGTCTTCCACCCGCAGGCCTCCCA...GACATGGACAGCGACAAACCTGAGGCCGTGTCTAGGAGGCTGGCACGACTGCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp CGGGTAGAGCCGCCTGTCCTAGGAGAAGCTGTACTCCAGATGCAGTGGGTGACAAGCGGCCGCAAGTGCTaGGGGAGGCTGCTTGGAGCA +
Preference number: 4 (lower is better)
Translates to: RVEPPVLGEAVLQMQWVTSGRKC*GRLLGA
Trigger: TGCTCCAAGCAGCCTCCCCCAGCACTTGCGGCCGCT...TGTCACCCACTGCATCTGGAGTACAGCTTCTCCTAGGACAGGCGGCTCTACCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp AGAGCCGCCTGTCCTAGGAGAAGCTGTACTCCAGATGCAGTGGGTGACACCCTGAGCGGCCGCAAGTGCTaGGGGAGGCTGCTTGGAGCA +
Preference number: 4 (lower is better)
Translates to: RAACPRRSCTPDAVGDTLSGRKC*GRLLGA
Trigger: TGCTCCAAGCAGCCTCCCCCAGCACTTGCGGCCGCT...CAGGGTGTCACCCACTGCATCTGGAGTACAGCTTCTCCTAGGACAGGCGGCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp ACTGTATTTATTAAAACAGGCAAGGGGCTGGGCTGCGGCAGGGCCCAGGTGCCTTGCCTGGGAAAGAGGTaGGACCGGGCCCCAACCCCC +
Preference number: 4 (lower is better)
Translates to: TVFIKTGKGLGCGRAQVPCLGKR*DRAPTP
Trigger: GGGGGTTGGGGCCCGGTCCCACCTCTTTCCCAGGCA...AGGCACCTGGGCCCTGCCGCAGCCCAGCCCCTTGCCTGTTTTAATAAATACAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000671997.1
ENST00000672944.1
CDS-3UTR CCA 90 bp TCGTGCCAGCCTCCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCCTCCAGCTCGGCTGTGCTCTATaGGCCTCGGACCTGCTCCTC +
Preference number: 4 (lower is better)
Translates to: SCQPPRHGLRFVAVHVLQLGCAL*ASDLLL
Trigger: GAGGAGCAGGTCCGAGGCCCATAGAGCACAGCCGAG...CTGGAGGACATGGACAGCGACAAACCTGAGGCCGTGTCTAGGAGGCTGGCACGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411988.6
ENST00000672816.1
CDS-3UTR TCA 90 bp AAGCAGTCGTGCCAGCCTCCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCGGGAGATGCGGTCGCTaGGCTGAGCGTTGTAGCCGT +
Preference number: 4 (lower is better)
Translates to: KQSCQPPRHGLRFVAVHVGRCGR*AERCSR
Trigger: ACGGCTACAACGCTCAGCTCAGCGACCGCATCTCCC...GACATGGACAGCGACAAACCTGAGGCCGTGTCTAGGAGGCTGGCACGACTGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328957.13
ENST00000672944.1
CDS-3UTR TCA 90 bp AGAAGCTGTACTCCAGATGCAGTGGGTGACACCCTGGTCACTCAGCCACACCCCCGGCCCAGCCCGTGTTaGACTCGACGTGGGCATCAA +
Preference number: 4 (lower is better)
Translates to: RSCTPDAVGDTLVTQPHPRPSPC*TRRGHQ
Trigger: TTGATGCCCACGTCGAGTTCAACACGGGCTGGGCCG...GGGGTGTGGCTGAGTGACCAGGGTGTCACCCACTGCATCTGGAGTACAGCTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328957.13
ENST00000672944.1
CDS-3UTR TCA 90 bp AGAAGCTGTACTCCAGATGCAGTGGGTGACACCCTGGTCACTCAGCCACACCCCTCATGGCTGGGGTCCTaGTGGGTGCTGACTCGTCGC +
Preference number: 4 (lower is better)
Translates to: RSCTPDAVGDTLVTQPHPSWLGS*WVLTRR
Trigger: GCGACGAGTCAGCACCCATCAGGACCCCAGCCATGA...GGGGTGTGGCTGAGTGACCAGGGTGTCACCCACTGCATCTGGAGTACAGCTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000411988.6
ENST00000672816.1
ENST00000672944.1
CDS-3UTR TCA 90 bp GGGGAGGCTGCTTGGAGCATGGGAGGCCTGCGGGTGGAAGACACCAGGGTGCAGTGTACACGTGGGACTTaGAGTCATCCATCCACACCT +
Preference number: 4 (lower is better)
Translates to: GEAAWSMGGLRVEDTRVQCTRGT*SHPSTP
Trigger: AGGTGTGGATGGATGACTTCAAGTCCCACGTGTACA...CTGCACCCTGGTGTCTTCCACCCGCAGGCCTCCCATGCTCCAAGCAGCCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR TCA 90 bp GGGGCTGTGGTACATGCAGAGGCGGCGGCTGTCCCAGCAGCCTGGCCAGGAGATTGTACACGTGGGACTTaGAGTCATCCATCCACACCT +
Preference number: 4 (lower is better)
Translates to: GAVVHAEAAAVPAAWPGDCTRGT*SHPSTP
Trigger: AGGTGTGGATGGATGACTTCAAGTCCCACGTGTACA...ATCTCCTGGCCAGGCTGCTGGGACAGCCGCCGCCTCTGCATGTACCACAGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR TCA 90 bp AGAGCCGCCTGTCCTAGGAGAAGCTGTACTCCAGATGCAGTGGGTGACACCCTGCGACACTTCAGCCTCTaGCGCAGGGCCAGCCTCTCA +
Preference number: 4 (lower is better)
Translates to: RAACPRRSCTPDAVGDTLRHFSL*RRASLS
Trigger: TGAGAGGCTGGCCCTGCGTCAGAGGCTGAAGTGTCG...CAGGGTGTCACCCACTGCATCTGGAGTACAGCTTCTCCTAGGACAGGCGGCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR TCA 90 bp CCTCAGCCTCTGCTGTCCTGGCCGCACATAGAGCCCTGTCCTGCTGTGTCTGCCGAGAAGGCACGTGTTTaGGTTGGCATCACTGTCCCC +
Preference number: 4 (lower is better)
Translates to: PQPLLSWPHIEPCPAVSAEKARV*VGITVP
Trigger: GGGGACAGTGATGCCAACTCAAACACGTGCCTTCTC...GGCAGACACAGCAGGACAGGGCTCTATGTGCGGCCAGGACAGCAGAGGCTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR TCA 90 bp GGGCTGTGGTACATGCAGAGGCGGCGGCTGTCCCAGCAGCCTGGCCAGGAGATATTATTTGGTCTCTGCTaGAGCAGTCGTGCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: GLWYMQRRRLSQQPGQEILFGLC*SSRASL
Trigger: GAGGCTGGCACGACTGCTTCAGCAGAGACCAAATAA...TATCTCCTGGCCAGGCTGCTGGGACAGCCGCCGCCTCTGCATGTACCACAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR GCA 90 bp AAACTGTATTTATTAAAACAGGCAAGGGGCTGGGCTGCGGCAGGGCCCAGGTGCGGTCGCCGCTCACGATaGGCACGAGCTCCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: KLYLLKQARGWAAAGPRCGRRSR*ARAPGS
Trigger: GCTCCCAGGAGCTCGTGCGCATCGTGAGCGGCGACC...GCACCTGGGCCCTGCCGCAGCCCAGCCCCTTGCCTGTTTTAATAAATACAGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328957.13
ENST00000672944.1
CDS-3UTR GCA 90 bp AGAGCCGCCTGTCCTAGGAGAAGCTGTACTCCAGATGCAGTGGGTGACACCCTGGCCGGTAGTCGGGGATaGTCCGATCGAGGGAGATGC +
Preference number: 4 (lower is better)
Translates to: RAACPRRSCTPDAVGDTLAGSRG*SDRGRC
Trigger: GCATCTCCCTCGATCGGAGCATCCCCGACTACCGGC...CAGGGTGTCACCCACTGCATCTGGAGTACAGCTTCTCCTAGGACAGGCGGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328957.13
ENST00000672944.1
CDS-3UTR GCA 90 bp CCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCCTCCAGCACCCCTCTTACCGCCATACACCTCCATaGCGGGGTCCAGCAGCCCAA +
Preference number: 4 (lower is better)
Translates to: PRHGLRFVAVHVLQHPSYRHTPP*RGPAAQ
Trigger: TTGGGCTGCTGGACCCCGGCATGGAGGTGTATGGCG...GTAAGAGGGGTGCTGGAGGACATGGACAGCGACAAACCTGAGGCCGTGTCTAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000411988.6
ENST00000672816.1
ENST00000672944.1
CDS-3UTR GCA 90 bp TCGTGCCAGCCTCCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCCTCCAGATGCTGCCGCCACACTaGCACACCCTCATGCCCAGT +
Preference number: 4 (lower is better)
Translates to: SCQPPRHGLRFVAVHVLQMLPPH*HTLMPS
Trigger: ACTGGGCATGAGGGTGTGGCAGTGTGGCGGCAGCAT...CTGGAGGACATGGACAGCGACAAACCTGAGGCCGTGTCTAGGAGGCTGGCACGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328957.13
ENST00000672944.1
CDS-3UTR GCA 90 bp TCGTGCCAGCCTCCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCCTCCAGCGGCGCGCAGGGCGTTaGGCTTGGCATAGTAGTCAA +
Preference number: 4 (lower is better)
Translates to: SCQPPRHGLRFVAVHVLQRRAGR*AWHSSQ
Trigger: TTGACTACTATGCCAAGCGCAACGCCCTGCGCGCCG...CTGGAGGACATGGACAGCGACAAACCTGAGGCCGTGTCTAGGAGGCTGGCACGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR GCA 90 bp CCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCCTCCAGCACCCCTCTTACTCTTCAGGGTGGGCATaGGGCCCGTGCCGTCATCCA +
Preference number: 4 (lower is better)
Translates to: PRHGLRFVAVHVLQHPSYSSGWA*GPCRHP
Trigger: TGGATGACGGCACGGGCCGCATGCCCACCCTGAAGA...GTAAGAGGGGTGCTGGAGGACATGGACAGCGACAAACCTGAGGCCGTGTCTAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR GCA 90 bp GTCTTGGTTGGAGGGCTGAGCGGCCGCAAGTGCTGGGGGAGGCTGCTTGGAGCAGTGGGGTCAGTGCCGTaGGTGTTTGATCCAGTTTCT +
Preference number: 4 (lower is better)
Translates to: VLVGGLSGRKCWGRLLGAVGSVP*VFDPVS
Trigger: AGAAACTGGATCAAACACGCACGGCACTGACCCCAC...TGCTCCAAGCAGCCTCCCCCAGCACTTGCGGCCGCTCAGCCCTCCAACCAAGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR GCA 90 bp AAACTGTATTTATTAAAACAGGCAAGGGGCTGGGCTGCGGCAGGGCCCAGGTGCGGGGGCTGTGGTACATaGAGAGGCGGCGGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: KLYLLKQARGWAAAGPRCGGCGT*RGGGCP
Trigger: GGGACAGCCGCCGCCTCTGCATGTACCACAGCCCCC...GCACCTGGGCCCTGCCGCAGCCCAGCCCCTTGCCTGTTTTAATAAATACAGTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000671997.1
ENST00000672944.1
CDS-3UTR GCA 90 bp CCTGGCCAGGAGATACCGTGGAGAAGGCACGTGTTTGAGTTGGCATCACTGTCCCTGAGCGGCCGCAAGTaGTGGGGGAGGCTGCTTGGA +
Preference number: 4 (lower is better)
Translates to: PGQEIPWRRHVFELASLSLSGRK*WGRLLG
Trigger: TCCAAGCAGCCTCCCCCAGCACTTGCGGCCGCTCAG...GGACAGTGATGCCAACTCAAACACGTGCCTTCTCCACGGTATCTCCTGGCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR GCA 90 bp GGGGAGGCTGCTTGGAGCATGGGAGGCCTGCGGGTGGAAGACACCAGGGTGCAGGGAAGACACACACAGTaGTGCTGCCTAATCCTCTCT +
Preference number: 4 (lower is better)
Translates to: GEAAWSMGGLRVEDTRVQGRHTQ*CCLILS
Trigger: AGAGAGGATTAGGCAGCAGCACTGTGTGTGTCTTCC...CTGCACCCTGGTGTCTTCCACCCGCAGGCCTCCCATGCTCCAAGCAGCCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000671997.1
ENST00000672944.1
CDS-3UTR GCA 90 bp CCTGGCCAGGAGATACCGTGGAGAAGGCACGTGTTTGAGTTGGCATCACTGTCCATGCTGCCGCCACACTaGCACACAGGGGTCCGGCTC +
Preference number: 4 (lower is better)
Translates to: PGQEIPWRRHVFELASLSMLPPH*HTGVRL
Trigger: GAGCCGGACCCCTGTGTGGCAGTGTGGCGGCAGCAT...GGACAGTGATGCCAACTCAAACACGTGCCTTCTCCACGGTATCTCCTGGCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397325.6
ENST00000671997.1
CDS-3UTR GCA 90 bp GGGGAGGCTGCTTGGAGCATGGGAGGCCTGCGGGTGGAAGACACCAGGGTGCAGCTTCTGTTTCCCTCATaGCCAGTTCTACGTTCTCGC +
Preference number: 4 (lower is better)
Translates to: GEAAWSMGGLRVEDTRVQLLFPS*PVLRSR
Trigger: GCGAGAACGTAGAACTGGGCATGAGGGAAACAGAAG...CTGCACCCTGGTGTCTTCCACCCGCAGGCCTCCCATGCTCCAAGCAGCCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411988.6
ENST00000672816.1
CDS-3UTR CCA 90 bp AAGCAGTCGTGCCAGCCTCCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCAGCTGGGAGGGCGTGTaGTTGACCACGCTGTGCACG +
Preference number: 4 (lower is better)
Translates to: KQSCQPPRHGLRFVAVHVSWEGV*LTTLCT
Trigger: CGTGCACAGCGTGGTCAACCACACGCCCTCCCAGCT...GACATGGACAGCGACAAACCTGAGGCCGTGTCTAGGAGGCTGGCACGACTGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328957.13
ENST00000672944.1
CDS-3UTR CCA 90 bp AGAGCCGCCTGTCCTAGGAGAAGCTGTACTCCAGATGCAGTGGGTGACACCCTGAGCTGGGAGGGCGTGTaGTTGACCACGCTGTGCACG +
Preference number: 4 (lower is better)
Translates to: RAACPRRSCTPDAVGDTLSWEGV*LTTLCT
Trigger: CGTGCACAGCGTGGTCAACCACACGCCCTCCCAGCT...CAGGGTGTCACCCACTGCATCTGGAGTACAGCTTCTCCTAGGACAGGCGGCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328957.13
ENST00000672944.1
CDS-3UTR CCA 90 bp GTCCTCCAGCACCCCTCTTACCAGACCACAAGGAGCTGCATTATGATGTGTGACCGACGACTGGGGCGGTaGCCGCCTTCCAGCCCTGCA +
Preference number: 4 (lower is better)
Translates to: VLQHPSYQTTRSCIMMCDRRLGR*PPSSPA
Trigger: TGCAGGGCTGGAAGGCGGCCACCGCCCCAGTCGTCG...GTCACACATCATAATGCAGCTCCTTGTGGTCTGGTAAGAGGGGTGCTGGAGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328957.13
ENST00000672944.1
CDS-3UTR CCA 90 bp AAGCAGTCGTGCCAGCCTCCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCAAAGAAGCCGACGACTaGGGCGGTGGCCGCCTTCCA +
Preference number: 4 (lower is better)
Translates to: KQSCQPPRHGLRFVAVHVKEADD*GGGRLP
Trigger: TGGAAGGCGGCCACCGCCCCAGTCGTCGGCTTCTTT...GACATGGACAGCGACAAACCTGAGGCCGTGTCTAGGAGGCTGGCACGACTGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328957.13
ENST00000672944.1
CDS-3UTR CCA 90 bp GTCCTCCAGCACCCCTCTTACCAGACCACAAGGAGCTGCATTATGATGTGTGACCTGGTGCGCTCGATGTaGGCCACGCGGGAGCAGGGC +
Preference number: 4 (lower is better)
Translates to: VLQHPSYQTTRSCIMMCDLVRSM*ATREQG
Trigger: GCCCTGCTCCCGCGTGGCCCACATCGAGCGCACCAG...GTCACACATCATAATGCAGCTCCTTGTGGTCTGGTAAGAGGGGTGCTGGAGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp GGGCTGTGGTACATGCAGAGGCGGCGGCTGTCCCAGCAGCCTGGCCAGGAGATAGCAGGGCGTTGCGCTTaGCATAGTAGTCAATGTCGT +
Preference number: 4 (lower is better)
Translates to: GLWYMQRRRLSQQPGQEIAGRCA*HSSQCR
Trigger: ACGACATTGACTACTATGCCAAGCGCAACGCCCTGC...TATCTCCTGGCCAGGCTGCTGGGACAGCCGCCGCCTCTGCATGTACCACAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp CAGCCTCCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCCTCCAGCACCCCCCCGAAGTCCACCCCTaGGTTCGACATGGGGATGTT +
Preference number: 4 (lower is better)
Translates to: QPPRHGLRFVAVHVLQHPPEVHP*VRHGDV
Trigger: AACATCCCCATGTCGAACCCAGGGGTGGACTTCGGG...GGGGTGCTGGAGGACATGGACAGCGACAAACCTGAGGCCGTGTCTAGGAGGCTG
61% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp AGAGCCGCCTGTCCTAGGAGAAGCTGTACTCCAGATGCAGTGGGTGACACCCTGCTGTACCGCACCAGCTaGGAGGACATCCCGTGGCAG +
Preference number: 4 (lower is better)
Translates to: RAACPRRSCTPDAVGDTLLYRTS*EDIPWQ
Trigger: CTGCCACGGGATGTCCTCCCAGCTGGTGCGGTACAG...CAGGGTGTCACCCACTGCATCTGGAGTACAGCTTCTCCTAGGACAGGCGGCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp AAGCAGTCGTGCCAGCCTCCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCCACACTTCTTCAGGGTaGGCATGCGGCCCGTGCCGT +
Preference number: 4 (lower is better)
Translates to: KQSCQPPRHGLRFVAVHVHTSSG*ACGPCR
Trigger: ACGGCACGGGCCGCATGCCCACCCTGAAGAAGTGTG...GACATGGACAGCGACAAACCTGAGGCCGTGTCTAGGAGGCTGGCACGACTGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp GTCTTGGTTGGAGGGCTGAGCGGCCGCAAGTGCTGGGGGAGGCTGCTTGGAGCAGCCGGAGCCCAAAGTTaGCATCTTTGGACATCTCCA +
Preference number: 4 (lower is better)
Translates to: VLVGGLSGRKCWGRLLGAAGAQS*HLWTSP
Trigger: TGGAGATGTCCAAAGATGCCAACTTTGGGCTCCGGC...TGCTCCAAGCAGCCTCCCCCAGCACTTGCGGCCGCTCAGCCCTCCAACCAAGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp CCTGGCCAGGAGATACCGTGGAGAAGGCACGTGTTTGAGTTGGCATCACTGTCCGTCACTCAGCCACACTaGCTCGGCCCAGCGCCTTCC +
Preference number: 4 (lower is better)
Translates to: PGQEIPWRRHVFELASLSVTQPH*LGPAPS
Trigger: GGAAGGCGCTGGGCCGAGCCAGTGTGGCTGAGTGAC...GGACAGTGATGCCAACTCAAACACGTGCCTTCTCCACGGTATCTCCTGGCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp TCGTGCCAGCCTCCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCCTCCAGCAGCCTCTGCTGTCCTaGCCGCACATAGAGCCCTGT +
Preference number: 4 (lower is better)
Translates to: SCQPPRHGLRFVAVHVLQQPLLS*PHIEPC
Trigger: ACAGGGCTCTATGTGCGGCCAGGACAGCAGAGGCTG...CTGGAGGACATGGACAGCGACAAACCTGAGGCCGTGTCTAGGAGGCTGGCACGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp CCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCCTCCAGCACCCCTCTTACCAGTGGGTGACACCCTaGTCACTCAGCCACACCCCG +
Preference number: 4 (lower is better)
Translates to: PRHGLRFVAVHVLQHPSYQWVTP*SLSHTP
Trigger: CGGGGTGTGGCTGAGTGACCAGGGTGTCACCCACTG...GTAAGAGGGGTGCTGGAGGACATGGACAGCGACAAACCTGAGGCCGTGTCTAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp AAGCAGTCGTGCCAGCCTCCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCCAGTGGGTGACACCCTaGTCACTCAGCCACACCCCG +
Preference number: 4 (lower is better)
Translates to: KQSCQPPRHGLRFVAVHVQWVTP*SLSHTP
Trigger: CGGGGTGTGGCTGAGTGACCAGGGTGTCACCCACTG...GACATGGACAGCGACAAACCTGAGGCCGTGTCTAGGAGGCTGGCACGACTGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp CGGGTAGAGCCGCCTGTCCTAGGAGAAGCTGTACTCCAGATGCAGTGGGTGACACAGTGGGTGACACCCTaGTCACTCAGCCACACCCCG +
Preference number: 4 (lower is better)
Translates to: RVEPPVLGEAVLQMQWVTQWVTP*SLSHTP
Trigger: CGGGGTGTGGCTGAGTGACCAGGGTGTCACCCACTG...TGTCACCCACTGCATCTGGAGTACAGCTTCTCCTAGGACAGGCGGCTCTACCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp AGAAGCTGTACTCCAGATGCAGTGGGTGACACCCTGGTCACTCAGCCACACCCCCCTCCCTATGGGGCGTaGGGGGCTGTGGTACATGCA +
Preference number: 4 (lower is better)
Translates to: RSCTPDAVGDTLVTQPHPPPYGA*GAVVHA
Trigger: TGCATGTACCACAGCCCCCCACGCCCCATAGGGAGG...GGGGTGTGGCTGAGTGACCAGGGTGTCACCCACTGCATCTGGAGTACAGCTTCT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp AAACTGTATTTATTAAAACAGGCAAGGGGCTGGGCTGCGGCAGGGCCCAGGTGCGCATGGTCCGGGGCTTaGCCTCCCTATGGGGCGTGG +
Preference number: 4 (lower is better)
Translates to: KLYLLKQARGWAAAGPRCAWSGA*PPYGAW
Trigger: CCACGCCCCATAGGGAGGCCAAGCCCCGGACCATGC...GCACCTGGGCCCTGCCGCAGCCCAGCCCCTTGCCTGTTTTAATAAATACAGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000671997.1
ENST00000672944.1
CDS-3UTR CCA 90 bp CCTGGCCAGGAGATACCGTGGAGAAGGCACGTGTTTGAGTTGGCATCACTGTCCCACCAGGGTGCAGCCTaGTGCATGGTCCGGGGCTTG +
Preference number: 4 (lower is better)
Translates to: PGQEIPWRRHVFELASLSHQGAA*CMVRGL
Trigger: CAAGCCCCGGACCATGCACCAGGCTGCACCCTGGTG...GGACAGTGATGCCAACTCAAACACGTGCCTTCTCCACGGTATCTCCTGGCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp CCTGGCCAGGAGATACCGTGGAGAAGGCACGTGTTTGAGTTGGCATCACTGTCCTGGGAGGCCTGCGGGTaGAAGACACCAGGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: PGQEIPWRRHVFELASLSWEACG*KTPGCS
Trigger: GCTGCACCCTGGTGTCTTCCACCCGCAGGCCTCCCA...GGACAGTGATGCCAACTCAAACACGTGCCTTCTCCACGGTATCTCCTGGCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp AGAGCCGCCTGTCCTAGGAGAAGCTGTACTCCAGATGCAGTGGGTGACACCCTGAGGCTGCTTGGAGCATaGGAGGCCTGCGGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: RAACPRRSCTPDAVGDTLRLLGA*EACGWK
Trigger: CTTCCACCCGCAGGCCTCCCATGCTCCAAGCAGCCT...CAGGGTGTCACCCACTGCATCTGGAGTACAGCTTCTCCTAGGACAGGCGGCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp CCTGGCCAGGAGATACCGTGGAGAAGGCACGTGTTTGAGTTGGCATCACTGTCCAGCGGCCGCAAGTGCTaGGGGAGGCTGCTTGGAGCA +
Preference number: 4 (lower is better)
Translates to: PGQEIPWRRHVFELASLSSGRKC*GRLLGA
Trigger: TGCTCCAAGCAGCCTCCCCCAGCACTTGCGGCCGCT...GGACAGTGATGCCAACTCAAACACGTGCCTTCTCCACGGTATCTCCTGGCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp AGAAGCTGTACTCCAGATGCAGTGGGTGACACCCTGGTCACTCAGCCACACCCCCCACACTCCAGTCGCTaGCAGTGCTGCTGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: RSCTPDAVGDTLVTQPHPPHSSR*QCCCGP
Trigger: AGGCCCACAGCAGCACTGCCAGCGACTGGAGTGTGG...GGGGTGTGGCTGAGTGACCAGGGTGTCACCCACTGCATCTGGAGTACAGCTTCT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000411988.6
ENST00000672816.1
CDS-3UTR TCA 90 bp GTCCTCCAGCACCCCTCTTACCAGACCACAAGGAGCTGCATTATGATGTGTGACGGTCCTGATGGGTGCTaGCTCGTCGCCGCGGTCCAG +
Preference number: 4 (lower is better)
Translates to: VLQHPSYQTTRSCIMMCDGPDGC*LVAAVQ
Trigger: CTGGACCGCGGCGACGAGTCAGCACCCATCAGGACC...GTCACACATCATAATGCAGCTCCTTGTGGTCTGGTAAGAGGGGTGCTGGAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000411988.6
ENST00000672816.1
ENST00000672944.1
CDS-3UTR TCA 90 bp ACTGTATTTATTAAAACAGGCAAGGGGCTGGGCTGCGGCAGGGCCCAGGTGCCTCGACACTTCAGCCTCTaGCGCAGGGCCAGCCTCTCA +
Preference number: 4 (lower is better)
Translates to: TVFIKTGKGLGCGRAQVPRHFSL*RRASLS
Trigger: TGAGAGGCTGGCCCTGCGTCAGAGGCTGAAGTGTCG...AGGCACCTGGGCCCTGCCGCAGCCCAGCCCCTTGCCTGTTTTAATAAATACAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000671997.1
ENST00000672944.1
CDS-3UTR TCA 90 bp CAGCCTCCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCCTCCAGCACCCCTCTCCAGGTACCACTTaGAGCTGCGACACTTCAGCC +
Preference number: 4 (lower is better)
Translates to: QPPRHGLRFVAVHVLQHPSPGTT*SCDTSA
Trigger: GGCTGAAGTGTCGCAGCTTCAAGTGGTACCTGGAGA...GGGGTGCTGGAGGACATGGACAGCGACAAACCTGAGGCCGTGTCTAGGAGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR TCA 90 bp CAGCCTCCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCCTCCAGCACCCCTCACCTCTCCGTACGTaGGGGTGTTGTTGTAGACCC +
Preference number: 4 (lower is better)
Translates to: QPPRHGLRFVAVHVLQHPSPLRT*GCCCRP
Trigger: GGGTCTACAACAACACCCTCACGTACGGAGAGGTGA...GGGGTGCTGGAGGACATGGACAGCGACAAACCTGAGGCCGTGTCTAGGAGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR TCA 90 bp CGGGTAGAGCCGCCTGTCCTAGGAGAAGCTGTACTCCAGATGCAGTGGGTGACATCCAGATGCAGTGGGTaGCACCCTGGTCACTCAGCC +
Preference number: 4 (lower is better)
Translates to: RVEPPVLGEAVLQMQWVTSRCSG*HPGHSA
Trigger: GGCTGAGTGACCAGGGTGTCACCCACTGCATCTGGA...TGTCACCCACTGCATCTGGAGTACAGCTTCTCCTAGGACAGGCGGCTCTACCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR TCA 90 bp AGAAGCTGTACTCCAGATGCAGTGGGTGACACCCTGGTCACTCAGCCACACCCCTCCAGATGCAGTGGGTaGCACCCTGGTCACTCAGCC +
Preference number: 4 (lower is better)
Translates to: RSCTPDAVGDTLVTQPHPSRCSG*HPGHSA
Trigger: GGCTGAGTGACCAGGGTGTCACCCACTGCATCTGGA...GGGGTGTGGCTGAGTGACCAGGGTGTCACCCACTGCATCTGGAGTACAGCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR TCA 90 bp AAACTGTATTTATTAAAACAGGCAAGGGGCTGGGCTGCGGCAGGGCCCAGGTGCTCTTGGTTGGAGGGCTaGGCGGCCGCAAGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: KLYLLKQARGWAAAGPRCSWLEG*AAASAG
Trigger: CCCAGCACTTGCGGCCGCTCAGCCCTCCAACCAAGA...GCACCTGGGCCCTGCCGCAGCCCAGCCCCTTGCCTGTTTTAATAAATACAGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000671997.1
ENST00000672944.1
CDS-3UTR GCA 90 bp CCTGGCCAGGAGATACCGTGGAGAAGGCACGTGTTTGAGTTGGCATCACTGTCCCGCCATACACCTCCATaGCGGGGTCCAGCAGCCCAA +
Preference number: 4 (lower is better)
Translates to: PGQEIPWRRHVFELASLSRHTPP*RGPAAQ
Trigger: TTGGGCTGCTGGACCCCGGCATGGAGGTGTATGGCG...GGACAGTGATGCCAACTCAAACACGTGCCTTCTCCACGGTATCTCCTGGCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000411988.6
ENST00000672816.1
ENST00000672944.1
CDS-3UTR GCA 90 bp CCTGGCCAGGAGATACCGTGGAGAAGGCACGTGTTTGAGTTGGCATCACTGTCCTGTAGGGCTTCCTGGTaGGCTCGATGTGGGCCACGC +
Preference number: 4 (lower is better)
Translates to: PGQEIPWRRHVFELASLSCRASW*ARCGPR
Trigger: GCGTGGCCCACATCGAGCGCACCAGGAAGCCCTACA...GGACAGTGATGCCAACTCAAACACGTGCCTTCTCCACGGTATCTCCTGGCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR GCA 90 bp CGGGTAGAGCCGCCTGTCCTAGGAGAAGCTGTACTCCAGATGCAGTGGGTGACACGGCGCGCAGGGCGTTaGGCTTGGCATAGTAGTCAA +
Preference number: 4 (lower is better)
Translates to: RVEPPVLGEAVLQMQWVTRRAGR*AWHSSQ
Trigger: TTGACTACTATGCCAAGCGCAACGCCCTGCGCGCCG...TGTCACCCACTGCATCTGGAGTACAGCTTCTCCTAGGACAGGCGGCTCTACCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR GCA 90 bp AAACTGTATTTATTAAAACAGGCAAGGGGCTGGGCTGCGGCAGGGCCCAGGTGCCCCAGAGGCCCCAGCTaGAGCAGTCCATCAGCGCTG +
Preference number: 4 (lower is better)
Translates to: KLYLLKQARGWAAAGPRCPRGPS*SSPSAL
Trigger: CAGCGCTGATGGACTGCTGCAGCTGGGGCCTCTGGG...GCACCTGGGCCCTGCCGCAGCCCAGCCCCTTGCCTGTTTTAATAAATACAGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000671997.1
ENST00000672944.1
CDS-3UTR GCA 90 bp CCTGGCCAGGAGATACCGTGGAGAAGGCACGTGTTTGAGTTGGCATCACTGTCCTGGGCATGCGGCCCGTaGCGTCATCCACCAGACACT +
Preference number: 4 (lower is better)
Translates to: PGQEIPWRRHVFELASLSWACGP*RHPPDT
Trigger: AGTGTCTGGTGGATGACGGCACGGGCCGCATGCCCA...GGACAGTGATGCCAACTCAAACACGTGCCTTCTCCACGGTATCTCCTGGCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR GCA 90 bp CAGCCTCCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCCTCCAGCACCCCCTGATCATCCACTTCTaGCCCGAGCACCTCTGTACC +
Preference number: 4 (lower is better)
Translates to: QPPRHGLRFVAVHVLQHPLIIHF*PEHLCT
Trigger: GGTACAGAGGTGCTCGGGGCAGAAGTGGATGATCAG...GGGGTGCTGGAGGACATGGACAGCGACAAACCTGAGGCCGTGTCTAGGAGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR GCA 90 bp CCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCCTCCAGCACCCCTCTTACCGGAGGTGGGGTCAGTaGCGTGCGTGTTTGATCCAG +
Preference number: 4 (lower is better)
Translates to: PRHGLRFVAVHVLQHPSYRRWGQ*RACLIQ
Trigger: CTGGATCAAACACGCACGGCACTGACCCCACCTCCG...GTAAGAGGGGTGCTGGAGGACATGGACAGCGACAAACCTGAGGCCGTGTCTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR GCA 90 bp CGGGTAGAGCCGCCTGTCCTAGGAGAAGCTGTACTCCAGATGCAGTGGGTGACACGGAGGTGGGGTCAGTaGCGTGCGTGTTTGATCCAG +
Preference number: 4 (lower is better)
Translates to: RVEPPVLGEAVLQMQWVTRRWGQ*RACLIQ
Trigger: CTGGATCAAACACGCACGGCACTGACCCCACCTCCG...TGTCACCCACTGCATCTGGAGTACAGCTTCTCCTAGGACAGGCGGCTCTACCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR GCA 90 bp AGAAGCTGTACTCCAGATGCAGTGGGTGACACCCTGGTCACTCAGCCACACCCCCATAGAGCCCTGTCCTaGTGTGTCTGCCGGGCACAC +
Preference number: 4 (lower is better)
Translates to: RSCTPDAVGDTLVTQPHPHRALS*CVCRAH
Trigger: GTGTGCCCGGCAGACACAGCAGGACAGGGCTCTATG...GGGGTGTGGCTGAGTGACCAGGGTGTCACCCACTGCATCTGGAGTACAGCTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR GCA 90 bp CGGGTAGAGCCGCCTGTCCTAGGAGAAGCTGTACTCCAGATGCAGTGGGTGACACATAGAGCCCTGTCCTaGTGTGTCTGCCGGGCACAC +
Preference number: 4 (lower is better)
Translates to: RVEPPVLGEAVLQMQWVTHRALS*CVCRAH
Trigger: GTGTGCCCGGCAGACACAGCAGGACAGGGCTCTATG...TGTCACCCACTGCATCTGGAGTACAGCTTCTCCTAGGACAGGCGGCTCTACCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR GCA 90 bp CCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCCTCCAGCACCCCTCTTACTGGAAGACACCAGGGTaGAGCCTGGTGCATGGTCCG +
Preference number: 4 (lower is better)
Translates to: PRHGLRFVAVHVLQHPSYWKTPG*SLVHGP
Trigger: CGGACCATGCACCAGGCTGCACCCTGGTGTCTTCCA...GTAAGAGGGGTGCTGGAGGACATGGACAGCGACAAACCTGAGGCCGTGTCTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR GCA 90 bp CGGGTAGAGCCGCCTGTCCTAGGAGAAGCTGTACTCCAGATGCAGTGGGTGACATGGAAGACACCAGGGTaGAGCCTGGTGCATGGTCCG +
Preference number: 4 (lower is better)
Translates to: RVEPPVLGEAVLQMQWVTWKTPG*SLVHGP
Trigger: CGGACCATGCACCAGGCTGCACCCTGGTGTCTTCCA...TGTCACCCACTGCATCTGGAGTACAGCTTCTCCTAGGACAGGCGGCTCTACCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR GCA 90 bp AGAAGCTGTACTCCAGATGCAGTGGGTGACACCCTGGTCACTCAGCCACACCCCCTGCTGAAGCAGTCGTaGCAGCCTCCTAGACACGGC +
Preference number: 4 (lower is better)
Translates to: RSCTPDAVGDTLVTQPHPLLKQS*QPPRHG
Trigger: GCCGTGTCTAGGAGGCTGGCACGACTGCTTCAGCAG...GGGGTGTGGCTGAGTGACCAGGGTGTCACCCACTGCATCTGGAGTACAGCTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR GCA 90 bp TGTCTGCCGGGCACACCCCGGTCACTCAGCCACACTGGCTCGGCCCAGCGCCTTAGACACACACAGTGCTaGTGCCTAATCCTCTCTTTA +
Preference number: 4 (lower is better)
Translates to: CLPGTPRSLSHTGSAQRLRHTQC*CLILSL
Trigger: TAAAGAGAGGATTAGGCAGCAGCACTGTGTGTGTCT...AAGGCGCTGGGCCGAGCCAGTGTGGCTGAGTGACCGGGGTGTGCCCGGCAGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000671997.1
ENST00000672944.1
CDS-3UTR GCA 90 bp CCAGGAAGACACACACAGTGCTGCTGCCTAATCCTCTCTTTATTTGGTCTCTGCGGCAAGGGGCTGGGCTaGGGCAGGGCCCAGGTGCCT +
Preference number: 4 (lower is better)
Translates to: PGRHTQCCCLILSLFGLCGKGLG*GRAQVP
Trigger: AGGCACCTGGGCCCTGCCGCAGCCCAGCCCCTTGCC...GCAGAGACCAAATAAAGAGAGGATTAGGCAGCAGCACTGTGTGTGTCTTCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000671997.1
ENST00000672944.1
CDS-3UTR GCA 90 bp AGAGCCGCCTGTCCTAGGAGAAGCTGTACTCCAGATGCAGTGGGTGACACCCTGGAACGAAGGAAGCTCTaGAGGGGCGGGACAGAGCCT +
Preference number: 4 (lower is better)
Translates to: RAACPRRSCTPDAVGDTLERRKL*RGGTEP
Trigger: AGGCTCTGTCCCGCCCCTGCAGAGCTTCCTTCGTTC...CAGGGTGTCACCCACTGCATCTGGAGTACAGCTTCTCCTAGGACAGGCGGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397325.6
ENST00000671997.1
CDS-3UTR GCA 90 bp GTCTTGGTTGGAGGGCTGAGCGGCCGCAAGTGCTGGGGGAGGCTGCTTGGAGCACTTCTGTTTCCCTCATaGCCAGTTCTACGTTCTCGC +
Preference number: 4 (lower is better)
Translates to: VLVGGLSGRKCWGRLLGALLFPS*PVLRSR
Trigger: GCGAGAACGTAGAACTGGGCATGAGGGAAACAGAAG...TGCTCCAAGCAGCCTCCCCCAGCACTTGCGGCCGCTCAGCCCTCCAACCAAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000411988.6
ENST00000672816.1
CDS-3UTR CCA 90 bp AGAAGCTGTACTCCAGATGCAGTGGGTGACACCCTGGTCACTCAGCCACACCCCACCTCCTTGAGGAGCTaGGAGGGCGTGTGGTTGACC +
Preference number: 4 (lower is better)
Translates to: RSCTPDAVGDTLVTQPHPTSLRS*EGVWLT
Trigger: GGTCAACCACACGCCCTCCCAGCTCCTCAAGGAGGT...GGGGTGTGGCTGAGTGACCAGGGTGTCACCCACTGCATCTGGAGTACAGCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328957.13
ENST00000672944.1
CDS-3UTR CCA 90 bp GGGCTGTGGTACATGCAGAGGCGGCGGCTGTCCCAGCAGCCTGGCCAGGAGATAAATCTTCACGAGGCCTaGGTACCGCTTGTTGACGTA +
Preference number: 4 (lower is better)
Translates to: GLWYMQRRRLSQQPGQEINLHEA*VPLVDV
Trigger: TACGTCAACAAGCGGTACCCAGGCCTCGTGAAGATT...TATCTCCTGGCCAGGCTGCTGGGACAGCCGCCGCCTCTGCATGTACCACAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328957.13
ENST00000672944.1
CDS-3UTR CCA 90 bp AGAGCCGCCTGTCCTAGGAGAAGCTGTACTCCAGATGCAGTGGGTGACACCCTGGATGTTGTCGATGGCTaGCAGCACGATGCGACGCCG +
Preference number: 4 (lower is better)
Translates to: RAACPRRSCTPDAVGDTLDVVDG*QHDATP
Trigger: CGGCGTCGCATCGTGCTGCCAGCCATCGACAACATC...CAGGGTGTCACCCACTGCATCTGGAGTACAGCTTCTCCTAGGACAGGCGGCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328957.13
ENST00000672944.1
CDS-3UTR CCA 90 bp TCGTGCCAGCCTCCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCCTCCAGTGTTGTAGGGCTTCCTaGTGCGCTCGATGTGGGCCA +
Preference number: 4 (lower is better)
Translates to: SCQPPRHGLRFVAVHVLQCCRAS*CARCGP
Trigger: TGGCCCACATCGAGCGCACCAGGAAGCCCTACAACA...CTGGAGGACATGGACAGCGACAAACCTGAGGCCGTGTCTAGGAGGCTGGCACGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp CCTCAGCCTCTGCTGTCCTGGCCGCACATAGAGCCCTGTCCTGCTGTGTCTGCCGCAGGGCGTTGCGCTTaGCATAGTAGTCAATGTCGT +
Preference number: 4 (lower is better)
Translates to: PQPLLSWPHIEPCPAVSAAGRCA*HSSQCR
Trigger: ACGACATTGACTACTATGCCAAGCGCAACGCCCTGC...GGCAGACACAGCAGGACAGGGCTCTATGTGCGGCCAGGACAGCAGAGGCTGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp TCGTGCCAGCCTCCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCCTCCAGCCCCTGGGTTCGACATaGGGATGTTCCAGGCCATGT +
Preference number: 4 (lower is better)
Translates to: SCQPPRHGLRFVAVHVLQPLGST*GCSRPC
Trigger: ACATGGCCTGGAACATCCCCATGTCGAACCCAGGGG...CTGGAGGACATGGACAGCGACAAACCTGAGGCCGTGTCTAGGAGGCTGGCACGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp ACTGTATTTATTAAAACAGGCAAGGGGCTGGGCTGCGGCAGGGCCCAGGTGCCTCAGGCAAGAAGGCTGTaGAGCCCAGAGGCCCCAGCT +
Preference number: 4 (lower is better)
Translates to: TVFIKTGKGLGCGRAQVPQARRL*SPEAPA
Trigger: AGCTGGGGCCTCTGGGCTCCACAGCCTTCTTGCCTG...AGGCACCTGGGCCCTGCCGCAGCCCAGCCCCTTGCCTGTTTTAATAAATACAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000671997.1
ENST00000672944.1
CDS-3UTR CCA 90 bp CCTGGCCAGGAGATACCGTGGAGAAGGCACGTGTTTGAGTTGGCATCACTGTCCCCACAGCCGCTGTGTTaGCCGCGCCACATCCTCACA +
Preference number: 4 (lower is better)
Translates to: PGQEIPWRRHVFELASLSPQPLC*PRHILT
Trigger: TGTGAGGATGTGGCGCGGCCAACACAGCGGCTGTGG...GGACAGTGATGCCAACTCAAACACGTGCCTTCTCCACGGTATCTCCTGGCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp CGGGTAGAGCCGCCTGTCCTAGGAGAAGCTGTACTCCAGATGCAGTGGGTGACAACAATGGGGCCACTCTaGGTGAAGTCCCACAGCCGC +
Preference number: 4 (lower is better)
Translates to: RVEPPVLGEAVLQMQWVTTMGPL*VKSHSR
Trigger: GCGGCTGTGGGACTTCACCCAGAGTGGCCCCATTGT...TGTCACCCACTGCATCTGGAGTACAGCTTCTCCTAGGACAGGCGGCTCTACCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp ACCACAAGGAGCTGCATTATGATGTGTGACTTAGGTCTTGGTTGGAGGGCTGAGCCAGGCAGCGGCCCGTaGCCCGGCTCACAATGGGGC +
Preference number: 4 (lower is better)
Translates to: TTRSCIMMCDLGLGWRAEPGSGP*PGSQWG
Trigger: GCCCCATTGTGAGCCGGGCCACGGGCCGCTGCCTGG...CTCAGCCCTCCAACCAAGACCTAAGTCACACATCATAATGCAGCTCCTTGTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp GGGCTGTGGTACATGCAGAGGCGGCGGCTGTCCCAGCAGCCTGGCCAGGAGATACAAAGTTGGCATCTTTaGACATCTCCACCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: GLWYMQRRRLSQQPGQEIQSWHL*TSPPPG
Trigger: GCCTGGAGGTGGAGATGTCCAAAGATGCCAACTTTG...TATCTCCTGGCCAGGCTGCTGGGACAGCCGCCGCCTCTGCATGTACCACAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp GTCTTGGTTGGAGGGCTGAGCGGCCGCAAGTGCTGGGGGAGGCTGCTTGGAGCACAAAGTTGGCATCTTTaGACATCTCCACCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: VLVGGLSGRKCWGRLLGAQSWHL*TSPPPG
Trigger: GCCTGGAGGTGGAGATGTCCAAAGATGCCAACTTTG...TGCTCCAAGCAGCCTCCCCCAGCACTTGCGGCCGCTCAGCCCTCCAACCAAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp AGAAGCTGTACTCCAGATGCAGTGGGTGACACCCTGGTCACTCAGCCACACCCCCAGCCTCTGCTGTCCTaGCCGCACATAGAGCCCTGT +
Preference number: 4 (lower is better)
Translates to: RSCTPDAVGDTLVTQPHPQPLLS*PHIEPC
Trigger: ACAGGGCTCTATGTGCGGCCAGGACAGCAGAGGCTG...GGGGTGTGGCTGAGTGACCAGGGTGTCACCCACTGCATCTGGAGTACAGCTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp CCTGGCCAGGAGATACCGTGGAGAAGGCACGTGTTTGAGTTGGCATCACTGTCCCAGTGGGTGACACCCTaGTCACTCAGCCACACCCCG +
Preference number: 4 (lower is better)
Translates to: PGQEIPWRRHVFELASLSQWVTP*SLSHTP
Trigger: CGGGGTGTGGCTGAGTGACCAGGGTGTCACCCACTG...GGACAGTGATGCCAACTCAAACACGTGCCTTCTCCACGGTATCTCCTGGCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp CCTGGCCAGGAGATACCGTGGAGAAGGCACGTGTTTGAGTTGGCATCACTGTCCGCTGTCCCAGCAGCCTaGCCAGGAGATACCGTGGAG +
Preference number: 4 (lower is better)
Translates to: PGQEIPWRRHVFELASLSAVPAA*PGDTVE
Trigger: CTCCACGGTATCTCCTGGCCAGGCTGCTGGGACAGC...GGACAGTGATGCCAACTCAAACACGTGCCTTCTCCACGGTATCTCCTGGCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp ACTGTATTTATTAAAACAGGCAAGGGGCTGGGCTGCGGCAGGGCCCAGGTGCCTCCTCCCTATGGGGCGTaGGGGGCTGTGGTACATGCA +
Preference number: 4 (lower is better)
Translates to: TVFIKTGKGLGCGRAQVPPPYGA*GAVVHA
Trigger: TGCATGTACCACAGCCCCCCACGCCCCATAGGGAGG...AGGCACCTGGGCCCTGCCGCAGCCCAGCCCCTTGCCTGTTTTAATAAATACAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000671997.1
ENST00000672944.1
CDS-3UTR CCA 90 bp CCTGGCCAGGAGATACCGTGGAGAAGGCACGTGTTTGAGTTGGCATCACTGTCCCCTCCCTATGGGGCGTaGGGGGCTGTGGTACATGCA +
Preference number: 4 (lower is better)
Translates to: PGQEIPWRRHVFELASLSPPYGA*GAVVHA
Trigger: TGCATGTACCACAGCCCCCCACGCCCCATAGGGAGG...GGACAGTGATGCCAACTCAAACACGTGCCTTCTCCACGGTATCTCCTGGCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp GTCCTCCAGCACCCCTCTTACCAGACCACAAGGAGCTGCATTATGATGTGTGACGCATGGTCCGGGGCTTaGCCTCCCTATGGGGCGTGG +
Preference number: 4 (lower is better)
Translates to: VLQHPSYQTTRSCIMMCDAWSGA*PPYGAW
Trigger: CCACGCCCCATAGGGAGGCCAAGCCCCGGACCATGC...GTCACACATCATAATGCAGCTCCTTGTGGTCTGGTAAGAGGGGTGCTGGAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp AAACTGTATTTATTAAAACAGGCAAGGGGCTGGGCTGCGGCAGGGCCCAGGTGCTGGGAGGCCTGCGGGTaGAAGACACCAGGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: KLYLLKQARGWAAAGPRCWEACG*KTPGCS
Trigger: GCTGCACCCTGGTGTCTTCCACCCGCAGGCCTCCCA...GCACCTGGGCCCTGCCGCAGCCCAGCCCCTTGCCTGTTTTAATAAATACAGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000671997.1
ENST00000672944.1
CDS-3UTR CCA 90 bp CCTGGCCAGGAGATACCGTGGAGAAGGCACGTGTTTGAGTTGGCATCACTGTCCAGGCTGCTTGGAGCATaGGAGGCCTGCGGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: PGQEIPWRRHVFELASLSRLLGA*EACGWK
Trigger: CTTCCACCCGCAGGCCTCCCATGCTCCAAGCAGCCT...GGACAGTGATGCCAACTCAAACACGTGCCTTCTCCACGGTATCTCCTGGCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp AAACTGTATTTATTAAAACAGGCAAGGGGCTGGGCTGCGGCAGGGCCCAGGTGCAGCGGCCGCAAGTGCTaGGGGAGGCTGCTTGGAGCA +
Preference number: 4 (lower is better)
Translates to: KLYLLKQARGWAAAGPRCSGRKC*GRLLGA
Trigger: TGCTCCAAGCAGCCTCCCCCAGCACTTGCGGCCGCT...GCACCTGGGCCCTGCCGCAGCCCAGCCCCTTGCCTGTTTTAATAAATACAGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000671997.1
ENST00000672944.1
CDS-3UTR CCA 90 bp TCGTGCCAGCCTCCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCCTCCAGGACTTAGGTCTTGGTTaGAGGGCTGAGCGGCCGCAA +
Preference number: 4 (lower is better)
Translates to: SCQPPRHGLRFVAVHVLQDLGLG*RAERPQ
Trigger: TTGCGGCCGCTCAGCCCTCCAACCAAGACCTAAGTC...CTGGAGGACATGGACAGCGACAAACCTGAGGCCGTGTCTAGGAGGCTGGCACGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp GGGCTGTGGTACATGCAGAGGCGGCGGCTGTCCCAGCAGCCTGGCCAGGAGATAGTGGCAGGTGGTTTCTaGGTTTCTGTCTGTTGTCTC +
Preference number: 4 (lower is better)
Translates to: GLWYMQRRRLSQQPGQEIVAGGF*VSVCCL
Trigger: GAGACAACAGACAGAAACCCAGAAACCACCTGCCAC...TATCTCCTGGCCAGGCTGCTGGGACAGCCGCCGCCTCTGCATGTACCACAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397325.6
ENST00000671997.1
CDS-3UTR CCA 90 bp GTCTTGGTTGGAGGGCTGAGCGGCCGCAAGTGCTGGGGGAGGCTGCTTGGAGCAGTGGCAGGTGGTTTCTaGGTTTCTGTCTGTTGTCTC +
Preference number: 4 (lower is better)
Translates to: VLVGGLSGRKCWGRLLGAVAGGF*VSVCCL
Trigger: GAGACAACAGACAGAAACCCAGAAACCACCTGCCAC...TGCTCCAAGCAGCCTCCCCCAGCACTTGCGGCCGCTCAGCCCTCCAACCAAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397325.6
ENST00000671997.1
CDS-3UTR TCA 90 bp CAGCCTCCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCCTCCAGCACCCCTTATTTGGTCTCTGCTaGAGCAGTCGTGCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: QPPRHGLRFVAVHVLQHPLFGLC*SSRASL
Trigger: GAGGCTGGCACGACTGCTTCAGCAGAGACCAAATAA...GGGGTGCTGGAGGACATGGACAGCGACAAACCTGAGGCCGTGTCTAGGAGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR TCA 90 bp GTCCTCCAGCACCCCTCTTACCAGACCACAAGGAGCTGCATTATGATGTGTGACGCCGCCGTGCCAGGCTaGAGTTGGCCTTTGCATCCC +
Preference number: 4 (lower is better)
Translates to: VLQHPSYQTTRSCIMMCDAAVPG*SWPLHP
Trigger: GGGATGCAAAGGCCAACTTCAGCCTGGCACGGCGGC...GTCACACATCATAATGCAGCTCCTTGTGGTCTGGTAAGAGGGGTGCTGGAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397325.6
ENST00000671997.1
CDS-3UTR GCA 90 bp GTCCTCCAGCACCCCTCTTACCAGACCACAAGGAGCTGCATTATGATGTGTGACAGGTGGTCCAGGCGCTaGAGGATGGCCTCACGGTCC +
Preference number: 4 (lower is better)
Translates to: VLQHPSYQTTRSCIMMCDRWSRR*RMASRS
Trigger: GGACCGTGAGGCCATCCTGCAGCGCCTGGACCACCT...GTCACACATCATAATGCAGCTCCTTGTGGTCTGGTAAGAGGGGTGCTGGAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328957.13
ENST00000672944.1
CDS-3UTR GCA 90 bp CCTGGCCAGGAGATACCGTGGAGAAGGCACGTGTTTGAGTTGGCATCACTGTCCTGGTTGACCACGCTGTaGACGGAGCGCAGGATGACC +
Preference number: 4 (lower is better)
Translates to: PGQEIPWRRHVFELASLSWLTTL*TERRMT
Trigger: GGTCATCCTGCGCTCCGTGCACAGCGTGGTCAACCA...GGACAGTGATGCCAACTCAAACACGTGCCTTCTCCACGGTATCTCCTGGCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328957.13
ENST00000672944.1
CDS-3UTR GCA 90 bp CCTGGCCAGGAGATACCGTGGAGAAGGCACGTGTTTGAGTTGGCATCACTGTCCCTTCCCGCCGGCTGTTaGGGACAATCTTCACGAGGC +
Preference number: 4 (lower is better)
Translates to: PGQEIPWRRHVFELASLSLPAGC*GQSSRG
Trigger: GCCTCGTGAAGATTGTCCGCAACAGCCGGCGGGAAG...GGACAGTGATGCCAACTCAAACACGTGCCTTCTCCACGGTATCTCCTGGCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328957.13
ENST00000672944.1
CDS-3UTR GCA 90 bp CCAGGAAGACACACACAGTGCTGCTGCCTAATCCTCTCTTTATTTGGTCTCTGCTCGGATCCGCGACAGTaGGGGCTCGGCCCAGCCCGT +
Preference number: 4 (lower is better)
Translates to: PGRHTQCCCLILSLFGLCSDPRQ*GLGPAR
Trigger: ACGGGCTGGGCCGAGCCCGCACTGTCGCGGATCCGA...GCAGAGACCAAATAAAGAGAGGATTAGGCAGCAGCACTGTGTGTGTCTTCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328957.13
ENST00000672944.1
CDS-3UTR GCA 90 bp CAGCCTCCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCCTCCAGCACCCCGCGTTCGCATACTGCTaGACCTCAAACGTGCTGTAC +
Preference number: 4 (lower is better)
Translates to: QPPRHGLRFVAVHVLQHPAFAYC*TSNVLY
Trigger: GTACAGCACGTTTGAGGTGCAGCAGTATGCGAACGC...GGGGTGCTGGAGGACATGGACAGCGACAAACCTGAGGCCGTGTCTAGGAGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328957.13
ENST00000672944.1
CDS-3UTR GCA 90 bp AGAAGCTGTACTCCAGATGCAGTGGGTGACACCCTGGTCACTCAGCCACACCCCGCGGCGTTCGCATACTaGTGCACCTCAAACGTGCTG +
Preference number: 4 (lower is better)
Translates to: RSCTPDAVGDTLVTQPHPAAFAY*CTSNVL
Trigger: CAGCACGTTTGAGGTGCAGCAGTATGCGAACGCCGC...GGGGTGTGGCTGAGTGACCAGGGTGTCACCCACTGCATCTGGAGTACAGCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328957.13
ENST00000672944.1
CDS-3UTR GCA 90 bp CCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCCTCCAGCACCCCTCTTACGCGGCGTTCGCATACTaGTGCACCTCAAACGTGCTG +
Preference number: 4 (lower is better)
Translates to: PRHGLRFVAVHVLQHPSYAAFAY*CTSNVL
Trigger: CAGCACGTTTGAGGTGCAGCAGTATGCGAACGCCGC...GTAAGAGGGGTGCTGGAGGACATGGACAGCGACAAACCTGAGGCCGTGTCTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328957.13
ENST00000672944.1
CDS-3UTR GCA 90 bp CCTGGCCAGGAGATACCGTGGAGAAGGCACGTGTTTGAGTTGGCATCACTGTCCATGCTGCCGCCACACTaGCACACCCTCATGCCCAGT +
Preference number: 4 (lower is better)
Translates to: PGQEIPWRRHVFELASLSMLPPH*HTLMPS
Trigger: ACTGGGCATGAGGGTGTGGCAGTGTGGCGGCAGCAT...GGACAGTGATGCCAACTCAAACACGTGCCTTCTCCACGGTATCTCCTGGCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328957.13
ENST00000672944.1
CDS-3UTR GCA 90 bp AAACTGTATTTATTAAAACAGGCAAGGGGCTGGGCTGCGGCAGGGCCCAGGTGCTGTAGGGCTTCCTGGTaGGCTCGATGTGGGCCACGC +
Preference number: 4 (lower is better)
Translates to: KLYLLKQARGWAAAGPRCCRASW*ARCGPR
Trigger: GCGTGGCCCACATCGAGCGCACCAGGAAGCCCTACA...GCACCTGGGCCCTGCCGCAGCCCAGCCCCTTGCCTGTTTTAATAAATACAGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000671997.1
ENST00000672944.1
CDS-3UTR GCA 90 bp ACTGTATTTATTAAAACAGGCAAGGGGCTGGGCTGCGGCAGGGCCCAGGTGCCTCGGCGCGCAGGGCGTTaGGCTTGGCATAGTAGTCAA +
Preference number: 4 (lower is better)
Translates to: TVFIKTGKGLGCGRAQVPRRAGR*AWHSSQ
Trigger: TTGACTACTATGCCAAGCGCAACGCCCTGCGCGCCG...AGGCACCTGGGCCCTGCCGCAGCCCAGCCCCTTGCCTGTTTTAATAAATACAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000671997.1
ENST00000672944.1
CDS-3UTR GCA 90 bp CCTGGCCAGGAGATACCGTGGAGAAGGCACGTGTTTGAGTTGGCATCACTGTCCCGGAGGTGGGGTCAGTaGCGTGCGTGTTTGATCCAG +
Preference number: 4 (lower is better)
Translates to: PGQEIPWRRHVFELASLSRRWGQ*RACLIQ
Trigger: CTGGATCAAACACGCACGGCACTGACCCCACCTCCG...GGACAGTGATGCCAACTCAAACACGTGCCTTCTCCACGGTATCTCCTGGCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR GCA 90 bp CCTGGCCAGGAGATACCGTGGAGAAGGCACGTGTTTGAGTTGGCATCACTGTCCCTGCTGAAGCAGTCGTaGCAGCCTCCTAGACACGGC +
Preference number: 4 (lower is better)
Translates to: PGQEIPWRRHVFELASLSLLKQS*QPPRHG
Trigger: GCCGTGTCTAGGAGGCTGGCACGACTGCTTCAGCAG...GGACAGTGATGCCAACTCAAACACGTGCCTTCTCCACGGTATCTCCTGGCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR GCA 90 bp TGTCTGCCGGGCACACCCCGGTCACTCAGCCACACTGGCTCGGCCCAGCGCCTTCACACACAGTGCTGCTaGCTAATCCTCTCTTTATTT +
Preference number: 4 (lower is better)
Translates to: CLPGTPRSLSHTGSAQRLHTQCC*LILSLF
Trigger: AAATAAAGAGAGGATTAGGCAGCAGCACTGTGTGTG...AAGGCGCTGGGCCGAGCCAGTGTGGCTGAGTGACCGGGGTGTGCCCGGCAGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000671997.1
ENST00000672944.1
CDS-3UTR GCA 90 bp GGGGAGGCTGCTTGGAGCATGGGAGGCCTGCGGGTGGAAGACACCAGGGTGCAGAGACACACACAGTGCTaGTGCCTAATCCTCTCTTTA +
Preference number: 4 (lower is better)
Translates to: GEAAWSMGGLRVEDTRVQRHTQC*CLILSL
Trigger: TAAAGAGAGGATTAGGCAGCAGCACTGTGTGTGTCT...CTGCACCCTGGTGTCTTCCACCCGCAGGCCTCCCATGCTCCAAGCAGCCTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000671997.1
ENST00000672944.1
CDS-3UTR GCA 90 bp CGGGTAGAGCCGCCTGTCCTAGGAGAAGCTGTACTCCAGATGCAGTGGGTGACAGCTGAAGTTGGCCTTTaGATCCCGAGGGAGCGAACC +
Preference number: 4 (lower is better)
Translates to: RVEPPVLGEAVLQMQWVTAEVGL*IPRERT
Trigger: GGTTCGCTCCCTCGGGATGCAAAGGCCAACTTCAGC...TGTCACCCACTGCATCTGGAGTACAGCTTCTCCTAGGACAGGCGGCTCTACCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397325.6
ENST00000671997.1
CDS-3UTR CCA 90 bp CCAGGAAGACACACACAGTGCTGCTGCCTAATCCTCTCTTTATTTGGTCTCTGCATGCGCACGAGCTCCTaGGAGCGGCCCTGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: PGRHTQCCCLILSLFGLCMRTSS*ERPCRR
Trigger: CCGCCTGCAGGGCCGCTCCCAGGAGCTCGTGCGCAT...GCAGAGACCAAATAAAGAGAGGATTAGGCAGCAGCACTGTGTGTGTCTTCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328957.13
ENST00000672944.1
CDS-3UTR CCA 90 bp ACCACAAGGAGCTGCATTATGATGTGTGACTTAGGTCTTGGTTGGAGGGCTGAGCCAGGCGCTGCAGGATaGCCTCACGGTCCCCCAGCG +
Preference number: 4 (lower is better)
Translates to: TTRSCIMMCDLGLGWRAEPGAAG*PHGPPA
Trigger: CGCTGGGGGACCGTGAGGCCATCCTGCAGCGCCTGG...CTCAGCCCTCCAACCAAGACCTAAGTCACACATCATAATGCAGCTCCTTGTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328957.13
ENST00000672944.1
CDS-3UTR CCA 90 bp CCTGGCCAGGAGATACCGTGGAGAAGGCACGTGTTTGAGTTGGCATCACTGTCCACCTCCTTGAGGAGCTaGGAGGGCGTGTGGTTGACC +
Preference number: 4 (lower is better)
Translates to: PGQEIPWRRHVFELASLSTSLRS*EGVWLT
Trigger: GGTCAACCACACGCCCTCCCAGCTCCTCAAGGAGGT...GGACAGTGATGCCAACTCAAACACGTGCCTTCTCCACGGTATCTCCTGGCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328957.13
ENST00000672944.1
CDS-3UTR CCA 90 bp GGGGAGGCTGCTTGGAGCATGGGAGGCCTGCGGGTGGAAGACACCAGGGTGCAGCGCTTGTTGACGTACTaGTCCAGATTGAACTTGAGT +
Preference number: 4 (lower is better)
Translates to: GEAAWSMGGLRVEDTRVQRLLTY*SRLNLS
Trigger: ACTCAAGTTCAATCTGGACCAGTACGTCAACAAGCG...CTGCACCCTGGTGTCTTCCACCCGCAGGCCTCCCATGCTCCAAGCAGCCTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328957.13
ENST00000672944.1
CDS-3UTR CCA 90 bp ACCACAAGGAGCTGCATTATGATGTGTGACTTAGGTCTTGGTTGGAGGGCTGAGCTGGTGCGCTCGATGTaGGCCACGCGGGAGCAGGGC +
Preference number: 4 (lower is better)
Translates to: TTRSCIMMCDLGLGWRAELVRSM*ATREQG
Trigger: GCCCTGCTCCCGCGTGGCCCACATCGAGCGCACCAG...CTCAGCCCTCCAACCAAGACCTAAGTCACACATCATAATGCAGCTCCTTGTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp CGGGTAGAGCCGCCTGTCCTAGGAGAAGCTGTACTCCAGATGCAGTGGGTGACATGTTGTAGGGCTTCCTaGTGCGCTCGATGTGGGCCA +
Preference number: 4 (lower is better)
Translates to: RVEPPVLGEAVLQMQWVTCCRAS*CARCGP
Trigger: TGGCCCACATCGAGCGCACCAGGAAGCCCTACAACA...TGTCACCCACTGCATCTGGAGTACAGCTTCTCCTAGGACAGGCGGCTCTACCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp CAGCCTCCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCCTCCAGCACCCCGCAGGGCGTTGCGCTTaGCATAGTAGTCAATGTCGT +
Preference number: 4 (lower is better)
Translates to: QPPRHGLRFVAVHVLQHPAGRCA*HSSQCR
Trigger: ACGACATTGACTACTATGCCAAGCGCAACGCCCTGC...GGGGTGCTGGAGGACATGGACAGCGACAAACCTGAGGCCGTGTCTAGGAGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp CCTCAGCCTCTGCTGTCCTGGCCGCACATAGAGCCCTGTCCTGCTGTGTCTGCCCAGGCCATGTACACGTaGGACTTGAAGTCATCCATC +
Preference number: 4 (lower is better)
Translates to: PQPLLSWPHIEPCPAVSAQAMYT*DLKSSI
Trigger: GATGGATGACTTCAAGTCCCACGTGTACATGGCCTG...GGCAGACACAGCAGGACAGGGCTCTATGTGCGGCCAGGACAGCAGAGGCTGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp AAGCAGTCGTGCCAGCCTCCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCCCCCTGGGTTCGACATaGGGATGTTCCAGGCCATGT +
Preference number: 4 (lower is better)
Translates to: KQSCQPPRHGLRFVAVHVPLGST*GCSRPC
Trigger: ACATGGCCTGGAACATCCCCATGTCGAACCCAGGGG...GACATGGACAGCGACAAACCTGAGGCCGTGTCTAGGAGGCTGGCACGACTGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp CGGGTAGAGCCGCCTGTCCTAGGAGAAGCTGTACTCCAGATGCAGTGGGTGACACCCCTGGGTTCGACATaGGGATGTTCCAGGCCATGT +
Preference number: 4 (lower is better)
Translates to: RVEPPVLGEAVLQMQWVTPLGST*GCSRPC
Trigger: ACATGGCCTGGAACATCCCCATGTCGAACCCAGGGG...TGTCACCCACTGCATCTGGAGTACAGCTTCTCCTAGGACAGGCGGCTCTACCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp AGAAGCTGTACTCCAGATGCAGTGGGTGACACCCTGGTCACTCAGCCACACCCCCCCGAAGTCCACCCCTaGGTTCGACATGGGGATGTT +
Preference number: 4 (lower is better)
Translates to: RSCTPDAVGDTLVTQPHPPEVHP*VRHGDV
Trigger: AACATCCCCATGTCGAACCCAGGGGTGGACTTCGGG...GGGGTGTGGCTGAGTGACCAGGGTGTCACCCACTGCATCTGGAGTACAGCTTCT
59% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp CCTCAGCCTCTGCTGTCCTGGCCGCACATAGAGCCCTGTCCTGCTGTGTCTGCCCCAGACAGTAGGCACTaGCTTTGCTGTTTCTCACCT +
Preference number: 4 (lower is better)
Translates to: PQPLLSWPHIEPCPAVSAPDSRH*LCCFSP
Trigger: AGGTGAGAAACAGCAAAGCCAGTGCCTACTGTCTGG...GGCAGACACAGCAGGACAGGGCTCTATGTGCGGCCAGGACAGCAGAGGCTGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp AAACTGTATTTATTAAAACAGGCAAGGGGCTGGGCTGCGGCAGGGCCCAGGTGCCTGTACCGCACCAGCTaGGAGGACATCCCGTGGCAG +
Preference number: 4 (lower is better)
Translates to: KLYLLKQARGWAAAGPRCLYRTS*EDIPWQ
Trigger: CTGCCACGGGATGTCCTCCCAGCTGGTGCGGTACAG...GCACCTGGGCCCTGCCGCAGCCCAGCCCCTTGCCTGTTTTAATAAATACAGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000671997.1
ENST00000672944.1
CDS-3UTR CCA 90 bp AAACTGTATTTATTAAAACAGGCAAGGGGCTGGGCTGCGGCAGGGCCCAGGTGCCACACTTCTTCAGGGTaGGCATGCGGCCCGTGCCGT +
Preference number: 4 (lower is better)
Translates to: KLYLLKQARGWAAAGPRCHTSSG*ACGPCR
Trigger: ACGGCACGGGCCGCATGCCCACCCTGAAGAAGTGTG...GCACCTGGGCCCTGCCGCAGCCCAGCCCCTTGCCTGTTTTAATAAATACAGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000671997.1
ENST00000672944.1
CDS-3UTR CCA 90 bp CCTGGCCAGGAGATACCGTGGAGAAGGCACGTGTTTGAGTTGGCATCACTGTCCACAATGGGGCCACTCTaGGTGAAGTCCCACAGCCGC +
Preference number: 4 (lower is better)
Translates to: PGQEIPWRRHVFELASLSTMGPL*VKSHSR
Trigger: GCGGCTGTGGGACTTCACCCAGAGTGGCCCCATTGT...GGACAGTGATGCCAACTCAAACACGTGCCTTCTCCACGGTATCTCCTGGCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp AGGAAGACACACACAGTGCTGCTGCCTAATCCTCTCTTTATTTGGTCTCTGCTGCCAGGCAGCGGCCCGTaGCCCGGCTCACAATGGGGC +
Preference number: 4 (lower is better)
Translates to: RKTHTVLLPNPLFIWSLLPGSGP*PGSQWG
Trigger: GCCCCATTGTGAGCCGGGCCACGGGCCGCTGCCTGG...CAGCAGAGACCAAATAAAGAGAGGATTAGGCAGCAGCACTGTGTGTGTCTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000671997.1
ENST00000672944.1
CDS-3UTR CCA 90 bp CAGCCTCCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCCTCCAGCACCCCGCCGGAGCCCAAAGTTaGCATCTTTGGACATCTCCA +
Preference number: 4 (lower is better)
Translates to: QPPRHGLRFVAVHVLQHPAGAQS*HLWTSP
Trigger: TGGAGATGTCCAAAGATGCCAACTTTGGGCTCCGGC...GGGGTGCTGGAGGACATGGACAGCGACAAACCTGAGGCCGTGTCTAGGAGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp GTCCTCCAGCACCCCTCTTACCAGACCACAAGGAGCTGCATTATGATGTGTGACGTCACTCAGCCACACTaGCTCGGCCCAGCGCCTTCC +
Preference number: 4 (lower is better)
Translates to: VLQHPSYQTTRSCIMMCDVTQPH*LGPAPS
Trigger: GGAAGGCGCTGGGCCGAGCCAGTGTGGCTGAGTGAC...GTCACACATCATAATGCAGCTCCTTGTGGTCTGGTAAGAGGGGTGCTGGAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp CCTGGCCAGGAGATACCGTGGAGAAGGCACGTGTTTGAGTTGGCATCACTGTCCCAGCCTCTGCTGTCCTaGCCGCACATAGAGCCCTGT +
Preference number: 4 (lower is better)
Translates to: PGQEIPWRRHVFELASLSQPLLS*PHIEPC
Trigger: ACAGGGCTCTATGTGCGGCCAGGACAGCAGAGGCTG...GGACAGTGATGCCAACTCAAACACGTGCCTTCTCCACGGTATCTCCTGGCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp AAACTGTATTTATTAAAACAGGCAAGGGGCTGGGCTGCGGCAGGGCCCAGGTGCCCTCCCTATGGGGCGTaGGGGGCTGTGGTACATGCA +
Preference number: 4 (lower is better)
Translates to: KLYLLKQARGWAAAGPRCPPYGA*GAVVHA
Trigger: TGCATGTACCACAGCCCCCCACGCCCCATAGGGAGG...GCACCTGGGCCCTGCCGCAGCCCAGCCCCTTGCCTGTTTTAATAAATACAGTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000671997.1
ENST00000672944.1
CDS-3UTR CCA 90 bp AGAAGCTGTACTCCAGATGCAGTGGGTGACACCCTGGTCACTCAGCCACACCCCGACTTAGGTCTTGGTTaGAGGGCTGAGCGGCCGCAA +
Preference number: 4 (lower is better)
Translates to: RSCTPDAVGDTLVTQPHPDLGLG*RAERPQ
Trigger: TTGCGGCCGCTCAGCCCTCCAACCAAGACCTAAGTC...GGGGTGTGGCTGAGTGACCAGGGTGTCACCCACTGCATCTGGAGTACAGCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp AAGCAGTCGTGCCAGCCTCCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCGACTTAGGTCTTGGTTaGAGGGCTGAGCGGCCGCAA +
Preference number: 4 (lower is better)
Translates to: KQSCQPPRHGLRFVAVHVDLGLG*RAERPQ
Trigger: TTGCGGCCGCTCAGCCCTCCAACCAAGACCTAAGTC...GACATGGACAGCGACAAACCTGAGGCCGTGTCTAGGAGGCTGGCACGACTGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR TCA 90 bp CCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCCTCCAGCACCCCTCTTACTCTCCAGGTACCACTTaGAGCTGCGACACTTCAGCC +
Preference number: 4 (lower is better)
Translates to: PRHGLRFVAVHVLQHPSYSPGTT*SCDTSA
Trigger: GGCTGAAGTGTCGCAGCTTCAAGTGGTACCTGGAGA...GTAAGAGGGGTGCTGGAGGACATGGACAGCGACAAACCTGAGGCCGTGTCTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR TCA 90 bp CGGGTAGAGCCGCCTGTCCTAGGAGAAGCTGTACTCCAGATGCAGTGGGTGACATCTCCAGGTACCACTTaGAGCTGCGACACTTCAGCC +
Preference number: 4 (lower is better)
Translates to: RVEPPVLGEAVLQMQWVTSPGTT*SCDTSA
Trigger: GGCTGAAGTGTCGCAGCTTCAAGTGGTACCTGGAGA...TGTCACCCACTGCATCTGGAGTACAGCTTCTCCTAGGACAGGCGGCTCTACCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR TCA 90 bp AGAAGCTGTACTCCAGATGCAGTGGGTGACACCCTGGTCACTCAGCCACACCCCTCACCTCTCCGTACGTaGGGGTGTTGTTGTAGACCC +
Preference number: 4 (lower is better)
Translates to: RSCTPDAVGDTLVTQPHPSPLRT*GCCCRP
Trigger: GGGTCTACAACAACACCCTCACGTACGGAGAGGTGA...GGGGTGTGGCTGAGTGACCAGGGTGTCACCCACTGCATCTGGAGTACAGCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR TCA 90 bp AAGCAGTCGTGCCAGCCTCCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCTCACCTCTCCGTACGTaGGGGTGTTGTTGTAGACCC +
Preference number: 4 (lower is better)
Translates to: KQSCQPPRHGLRFVAVHVSPLRT*GCCCRP
Trigger: GGGTCTACAACAACACCCTCACGTACGGAGAGGTGA...GACATGGACAGCGACAAACCTGAGGCCGTGTCTAGGAGGCTGGCACGACTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR TCA 90 bp CGGGTAGAGCCGCCTGTCCTAGGAGAAGCTGTACTCCAGATGCAGTGGGTGACAGAGAAGGCACGTGTTTaGGTTGGCATCACTGTCCCC +
Preference number: 4 (lower is better)
Translates to: RVEPPVLGEAVLQMQWVTEKARV*VGITVP
Trigger: GGGGACAGTGATGCCAACTCAAACACGTGCCTTCTC...TGTCACCCACTGCATCTGGAGTACAGCTTCTCCTAGGACAGGCGGCTCTACCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR TCA 90 bp GTCTTGGTTGGAGGGCTGAGCGGCCGCAAGTGCTGGGGGAGGCTGCTTGGAGCACTGCATTATGATGTGTaGCTTAGGTCTTGGTTGGAG +
Preference number: 4 (lower is better)
Translates to: VLVGGLSGRKCWGRLLGALHYDV*LRSWLE
Trigger: CTCCAACCAAGACCTAAGTCACACATCATAATGCAG...TGCTCCAAGCAGCCTCCCCCAGCACTTGCGGCCGCTCAGCCCTCCAACCAAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR TCA 90 bp CTGCTGTCCTGGCCGCACATAGAGCCCTGTCCTGCTGTGTCTGCCGGGCACACCCTGCATTATGATGTGTaGCTTAGGTCTTGGTTGGAG +
Preference number: 4 (lower is better)
Translates to: LLSWPHIEPCPAVSAGHTLHYDV*LRSWLE
Trigger: CTCCAACCAAGACCTAAGTCACACATCATAATGCAG...GGTGTGCCCGGCAGACACAGCAGGACAGGGCTCTATGTGCGGCCAGGACAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR TCA 90 bp TCGTGCCAGCCTCCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCCTCCAGTTATTTGGTCTCTGCTaGAGCAGTCGTGCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: SCQPPRHGLRFVAVHVLQLFGLC*SSRASL
Trigger: GAGGCTGGCACGACTGCTTCAGCAGAGACCAAATAA...CTGGAGGACATGGACAGCGACAAACCTGAGGCCGTGTCTAGGAGGCTGGCACGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR GCA 90 bp ACCACAAGGAGCTGCATTATGATGTGTGACTTAGGTCTTGGTTGGAGGGCTGAGGGTCGCCGCTCACGATaGGCACGAGCTCCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: TTRSCIMMCDLGLGWRAEGRRSR*ARAPGS
Trigger: GCTCCCAGGAGCTCGTGCGCATCGTGAGCGGCGACC...CTCAGCCCTCCAACCAAGACCTAAGTCACACATCATAATGCAGCTCCTTGTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328957.13
ENST00000672944.1
CDS-3UTR GCA 90 bp GTCCTCCAGCACCCCTCTTACCAGACCACAAGGAGCTGCATTATGATGTGTGACTGGGCATGCGGCCCGTaGCGTCATCCACCAGACACT +
Preference number: 4 (lower is better)
Translates to: VLQHPSYQTTRSCIMMCDWACGP*RHPPDT
Trigger: AGTGTCTGGTGGATGACGGCACGGGCCGCATGCCCA...GTCACACATCATAATGCAGCTCCTTGTGGTCTGGTAAGAGGGGTGCTGGAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR GCA 90 bp AAACTGTATTTATTAAAACAGGCAAGGGGCTGGGCTGCGGCAGGGCCCAGGTGCTGGAAGACACCAGGGTaGAGCCTGGTGCATGGTCCG +
Preference number: 4 (lower is better)
Translates to: KLYLLKQARGWAAAGPRCWKTPG*SLVHGP
Trigger: CGGACCATGCACCAGGCTGCACCCTGGTGTCTTCCA...GCACCTGGGCCCTGCCGCAGCCCAGCCCCTTGCCTGTTTTAATAAATACAGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000671997.1
ENST00000672944.1
CDS-3UTR GCA 90 bp GGGGAGGCTGCTTGGAGCATGGGAGGCCTGCGGGTGGAAGACACCAGGGTGCAGCAGACCACAAGGAGCTaGATTATGATGTGTGACTTA +
Preference number: 4 (lower is better)
Translates to: GEAAWSMGGLRVEDTRVQQTTRS*IMMCDL
Trigger: TAAGTCACACATCATAATGCAGCTCCTTGTGGTCTG...CTGCACCCTGGTGTCTTCCACCCGCAGGCCTCCCATGCTCCAAGCAGCCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR GCA 90 bp GTCTTGGTTGGAGGGCTGAGCGGCCGCAAGTGCTGGGGGAGGCTGCTTGGAGCAAGACACACACAGTGCTaGTGCCTAATCCTCTCTTTA +
Preference number: 4 (lower is better)
Translates to: VLVGGLSGRKCWGRLLGARHTQC*CLILSL
Trigger: TAAAGAGAGGATTAGGCAGCAGCACTGTGTGTGTCT...TGCTCCAAGCAGCCTCCCCCAGCACTTGCGGCCGCTCAGCCCTCCAACCAAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000671997.1
ENST00000672944.1
CDS-3UTR CCA 90 bp CAGCCTCCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCCTCCAGCACCCCCAGGCCATGTACACGTaGGACTTGAAGTCATCCATC +
Preference number: 4 (lower is better)
Translates to: QPPRHGLRFVAVHVLQHPQAMYT*DLKSSI
Trigger: GATGGATGACTTCAAGTCCCACGTGTACATGGCCTG...GGGGTGCTGGAGGACATGGACAGCGACAAACCTGAGGCCGTGTCTAGGAGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp GTCCTCCAGCACCCCTCTTACCAGACCACAAGGAGCTGCATTATGATGTGTGACCTGTACCGCACCAGCTaGGAGGACATCCCGTGGCAG +
Preference number: 4 (lower is better)
Translates to: VLQHPSYQTTRSCIMMCDLYRTS*EDIPWQ
Trigger: CTGCCACGGGATGTCCTCCCAGCTGGTGCGGTACAG...GTCACACATCATAATGCAGCTCCTTGTGGTCTGGTAAGAGGGGTGCTGGAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp GTCCTCCAGCACCCCTCTTACCAGACCACAAGGAGCTGCATTATGATGTGTGACCACACTTCTTCAGGGTaGGCATGCGGCCCGTGCCGT +
Preference number: 4 (lower is better)
Translates to: VLQHPSYQTTRSCIMMCDHTSSG*ACGPCR
Trigger: ACGGCACGGGCCGCATGCCCACCCTGAAGAAGTGTG...GTCACACATCATAATGCAGCTCCTTGTGGTCTGGTAAGAGGGGTGCTGGAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp GTCCTCCAGCACCCCTCTTACCAGACCACAAGGAGCTGCATTATGATGTGTGACCCACAGCCGCTGTGTTaGCCGCGCCACATCCTCACA +
Preference number: 4 (lower is better)
Translates to: VLQHPSYQTTRSCIMMCDPQPLC*PRHILT
Trigger: TGTGAGGATGTGGCGCGGCCAACACAGCGGCTGTGG...GTCACACATCATAATGCAGCTCCTTGTGGTCTGGTAAGAGGGGTGCTGGAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp CCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCCTCCAGCACCCCTCTTACGTACTCCAGATGCAGTaGGTGACACCCTGGTCACTC +
Preference number: 4 (lower is better)
Translates to: PRHGLRFVAVHVLQHPSYVLQMQ*VTPWSL
Trigger: GAGTGACCAGGGTGTCACCCACTGCATCTGGAGTAC...GTAAGAGGGGTGCTGGAGGACATGGACAGCGACAAACCTGAGGCCGTGTCTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp AGAGCCGCCTGTCCTAGGAGAAGCTGTACTCCAGATGCAGTGGGTGACACCCTGGTACTCCAGATGCAGTaGGTGACACCCTGGTCACTC +
Preference number: 4 (lower is better)
Translates to: RAACPRRSCTPDAVGDTLVLQMQ*VTPWSL
Trigger: GAGTGACCAGGGTGTCACCCACTGCATCTGGAGTAC...CAGGGTGTCACCCACTGCATCTGGAGTACAGCTTCTCCTAGGACAGGCGGCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp AAGCAGTCGTGCCAGCCTCCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCGGCACGTGTTTGAGTTaGCATCACTGTCCCCAGACG +
Preference number: 4 (lower is better)
Translates to: KQSCQPPRHGLRFVAVHVGTCLS*HHCPQT
Trigger: CGTCTGGGGACAGTGATGCCAACTCAAACACGTGCC...GACATGGACAGCGACAAACCTGAGGCCGTGTCTAGGAGGCTGGCACGACTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp AGAAGCTGTACTCCAGATGCAGTGGGTGACACCCTGGTCACTCAGCCACACCCCGGCCAGGAGATACCGTaGAGAAGGCACGTGTTTGAG +
Preference number: 4 (lower is better)
Translates to: RSCTPDAVGDTLVTQPHPGQEIP*RRHVFE
Trigger: CTCAAACACGTGCCTTCTCCACGGTATCTCCTGGCC...GGGGTGTGGCTGAGTGACCAGGGTGTCACCCACTGCATCTGGAGTACAGCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp AGAGCCGCCTGTCCTAGGAGAAGCTGTACTCCAGATGCAGTGGGTGACACCCTGGGCCAGGAGATACCGTaGAGAAGGCACGTGTTTGAG +
Preference number: 4 (lower is better)
Translates to: RAACPRRSCTPDAVGDTLGQEIP*RRHVFE
Trigger: CTCAAACACGTGCCTTCTCCACGGTATCTCCTGGCC...CAGGGTGTCACCCACTGCATCTGGAGTACAGCTTCTCCTAGGACAGGCGGCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp GGGGCTGTGGTACATGCAGAGGCGGCGGCTGTCCCAGCAGCCTGGCCAGGAGATTTTACCTTATCTTGCTaGAACCCTTCTGTTTCCCTC +
Preference number: 4 (lower is better)
Translates to: GAVVHAEAAAVPAAWPGDFTLSC*NPSVSL
Trigger: GAGGGAAACAGAAGGGTTCCAGCAAGATAAGGTAAA...ATCTCCTGGCCAGGCTGCTGGGACAGCCGCCGCCTCTGCATGTACCACAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411988.6
ENST00000672816.1
CDS-3UTR TCA 90 bp TCGTGCCAGCCTCCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCCTCCAGTGTACACGTGGGACTTaGAGTCATCCATCCACACCT +
Preference number: 4 (lower is better)
Translates to: SCQPPRHGLRFVAVHVLQCTRGT*SHPSTP
Trigger: AGGTGTGGATGGATGACTTCAAGTCCCACGTGTACA...CTGGAGGACATGGACAGCGACAAACCTGAGGCCGTGTCTAGGAGGCTGGCACGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR TCA 90 bp GTCCTCCAGCACCCCTCTTACCAGACCACAAGGAGCTGCATTATGATGTGTGACTCCAGATGCAGTGGGTaGCACCCTGGTCACTCAGCC +
Preference number: 4 (lower is better)
Translates to: VLQHPSYQTTRSCIMMCDSRCSG*HPGHSA
Trigger: GGCTGAGTGACCAGGGTGTCACCCACTGCATCTGGA...GTCACACATCATAATGCAGCTCCTTGTGGTCTGGTAAGAGGGGTGCTGGAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR TCA 90 bp ACTGTATTTATTAAAACAGGCAAGGGGCTGGGCTGCGGCAGGGCCCAGGTGCCTGAGAAGGCACGTGTTTaGGTTGGCATCACTGTCCCC +
Preference number: 4 (lower is better)
Translates to: TVFIKTGKGLGCGRAQVPEKARV*VGITVP
Trigger: GGGGACAGTGATGCCAACTCAAACACGTGCCTTCTC...AGGCACCTGGGCCCTGCCGCAGCCCAGCCCCTTGCCTGTTTTAATAAATACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000671997.1
ENST00000672944.1
CDS-3UTR TCA 90 bp AGAGCCGCCTGTCCTAGGAGAAGCTGTACTCCAGATGCAGTGGGTGACACCCTGTTATTTGGTCTCTGCTaGAGCAGTCGTGCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: RAACPRRSCTPDAVGDTLLFGLC*SSRASL
Trigger: GAGGCTGGCACGACTGCTTCAGCAGAGACCAAATAA...CAGGGTGTCACCCACTGCATCTGGAGTACAGCTTCTCCTAGGACAGGCGGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR GCA 90 bp ACCACAAGGAGCTGCATTATGATGTGTGACTTAGGTCTTGGTTGGAGGGCTGAGCCCAGAGGCCCCAGCTaGAGCAGTCCATCAGCGCTG +
Preference number: 4 (lower is better)
Translates to: TTRSCIMMCDLGLGWRAEPRGPS*SSPSAL
Trigger: CAGCGCTGATGGACTGCTGCAGCTGGGGCCTCTGGG...CTCAGCCCTCCAACCAAGACCTAAGTCACACATCATAATGCAGCTCCTTGTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR GCA 90 bp ACTGTATTTATTAAAACAGGCAAGGGGCTGGGCTGCGGCAGGGCCCAGGTGCCTCTGATCATCCACTTCTaGCCCGAGCACCTCTGTACC +
Preference number: 4 (lower is better)
Translates to: TVFIKTGKGLGCGRAQVPLIIHF*PEHLCT
Trigger: GGTACAGAGGTGCTCGGGGCAGAAGTGGATGATCAG...AGGCACCTGGGCCCTGCCGCAGCCCAGCCCCTTGCCTGTTTTAATAAATACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000671997.1
ENST00000672944.1
CDS-3UTR GCA 90 bp CGGGTAGAGCCGCCTGTCCTAGGAGAAGCTGTACTCCAGATGCAGTGGGTGACAGTGGGGTCAGTGCCGTaGGTGTTTGATCCAGTTTCT +
Preference number: 4 (lower is better)
Translates to: RVEPPVLGEAVLQMQWVTVGSVP*VFDPVS
Trigger: AGAAACTGGATCAAACACGCACGGCACTGACCCCAC...TGTCACCCACTGCATCTGGAGTACAGCTTCTCCTAGGACAGGCGGCTCTACCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR GCA 90 bp AGAGCCGCCTGTCCTAGGAGAAGCTGTACTCCAGATGCAGTGGGTGACACCCTGGTGGGGTCAGTGCCGTaGGTGTTTGATCCAGTTTCT +
Preference number: 4 (lower is better)
Translates to: RAACPRRSCTPDAVGDTLVGSVP*VFDPVS
Trigger: AGAAACTGGATCAAACACGCACGGCACTGACCCCAC...CAGGGTGTCACCCACTGCATCTGGAGTACAGCTTCTCCTAGGACAGGCGGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR GCA 90 bp GTCCTCCAGCACCCCTCTTACCAGACCACAAGGAGCTGCATTATGATGTGTGACCATAGAGCCCTGTCCTaGTGTGTCTGCCGGGCACAC +
Preference number: 4 (lower is better)
Translates to: VLQHPSYQTTRSCIMMCDHRALS*CVCRAH
Trigger: GTGTGCCCGGCAGACACAGCAGGACAGGGCTCTATG...GTCACACATCATAATGCAGCTCCTTGTGGTCTGGTAAGAGGGGTGCTGGAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR GCA 90 bp ACCACAAGGAGCTGCATTATGATGTGTGACTTAGGTCTTGGTTGGAGGGCTGAGCTGAGCGGCCGCAAGTaGTGGGGGAGGCTGCTTGGA +
Preference number: 4 (lower is better)
Translates to: TTRSCIMMCDLGLGWRAELSGRK*WGRLLG
Trigger: TCCAAGCAGCCTCCCCCAGCACTTGCGGCCGCTCAG...CTCAGCCCTCCAACCAAGACCTAAGTCACACATCATAATGCAGCTCCTTGTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR GCA 90 bp GGGCTGTGGTACATGCAGAGGCGGCGGCTGTCCCAGCAGCCTGGCCAGGAGATACAGACCACAAGGAGCTaGATTATGATGTGTGACTTA +
Preference number: 4 (lower is better)
Translates to: GLWYMQRRRLSQQPGQEIQTTRS*IMMCDL
Trigger: TAAGTCACACATCATAATGCAGCTCCTTGTGGTCTG...TATCTCCTGGCCAGGCTGCTGGGACAGCCGCCGCCTCTGCATGTACCACAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR GCA 90 bp GTCTTGGTTGGAGGGCTGAGCGGCCGCAAGTGCTGGGGGAGGCTGCTTGGAGCACAGACCACAAGGAGCTaGATTATGATGTGTGACTTA +
Preference number: 4 (lower is better)
Translates to: VLVGGLSGRKCWGRLLGAQTTRS*IMMCDL
Trigger: TAAGTCACACATCATAATGCAGCTCCTTGTGGTCTG...TGCTCCAAGCAGCCTCCCCCAGCACTTGCGGCCGCTCAGCCCTCCAACCAAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR GCA 90 bp CCTCAGCCTCTGCTGTCCTGGCCGCACATAGAGCCCTGTCCTGCTGTGTCTGCCAGACACACACAGTGCTaGTGCCTAATCCTCTCTTTA +
Preference number: 4 (lower is better)
Translates to: PQPLLSWPHIEPCPAVSARHTQC*CLILSL
Trigger: TAAAGAGAGGATTAGGCAGCAGCACTGTGTGTGTCT...GGCAGACACAGCAGGACAGGGCTCTATGTGCGGCCAGGACAGCAGAGGCTGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000671997.1
ENST00000672944.1
CDS-3UTR GCA 90 bp CCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCCTCCAGCACCCCTCTTACAGCGAACCGCGTTTCTaGATCAGGTTCACATCGTGG +
Preference number: 4 (lower is better)
Translates to: PRHGLRFVAVHVLQHPSYSEPRF*IRFTSW
Trigger: CCACGATGTGAACCTGATGCAGAAACGCGGTTCGCT...GTAAGAGGGGTGCTGGAGGACATGGACAGCGACAAACCTGAGGCCGTGTCTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397325.6
ENST00000671997.1
CDS-3UTR CCA 90 bp AAACTGTATTTATTAAAACAGGCAAGGGGCTGGGCTGCGGCAGGGCCCAGGTGCTCTGTCTGCACTTTCTaGGCCGGTAGTCGGGGATGC +
Preference number: 4 (lower is better)
Translates to: KLYLLKQARGWAAAGPRCSVCTF*AGSRGC
Trigger: GCATCCCCGACTACCGGCCCAGAAAGTGCAGACAGA...GCACCTGGGCCCTGCCGCAGCCCAGCCCCTTGCCTGTTTTAATAAATACAGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328957.13
ENST00000672944.1
CDS-3UTR CCA 90 bp TCGTGCCAGCCTCCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCCTCCAGCCAGACAGTAGGCACTaGCTTTGCTGTTTCTCACCT +
Preference number: 4 (lower is better)
Translates to: SCQPPRHGLRFVAVHVLQPDSRH*LCCFSP
Trigger: AGGTGAGAAACAGCAAAGCCAGTGCCTACTGTCTGG...CTGGAGGACATGGACAGCGACAAACCTGAGGCCGTGTCTAGGAGGCTGGCACGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp CGGGTAGAGCCGCCTGTCCTAGGAGAAGCTGTACTCCAGATGCAGTGGGTGACACATCCACCAGACACTTaGAGTCAGGCAAGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: RVEPPVLGEAVLQMQWVTHPPDT*SQARRL
Trigger: CAGCCTTCTTGCCTGACTCCAAGTGTCTGGTGGATG...TGTCACCCACTGCATCTGGAGTACAGCTTCTCCTAGGACAGGCGGCTCTACCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp GTCCTCCAGCACCCCTCTTACCAGACCACAAGGAGCTGCATTATGATGTGTGACACAATGGGGCCACTCTaGGTGAAGTCCCACAGCCGC +
Preference number: 4 (lower is better)
Translates to: VLQHPSYQTTRSCIMMCDTMGPL*VKSHSR
Trigger: GCGGCTGTGGGACTTCACCCAGAGTGGCCCCATTGT...GTCACACATCATAATGCAGCTCCTTGTGGTCTGGTAAGAGGGGTGCTGGAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp TCGTGCCAGCCTCCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCCTCCAGCAAAGTTGGCATCTTTaGACATCTCCACCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: SCQPPRHGLRFVAVHVLQQSWHL*TSPPPG
Trigger: GCCTGGAGGTGGAGATGTCCAAAGATGCCAACTTTG...CTGGAGGACATGGACAGCGACAAACCTGAGGCCGTGTCTAGGAGGCTGGCACGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp CGGGTAGAGCCGCCTGTCCTAGGAGAAGCTGTACTCCAGATGCAGTGGGTGACAGCCGGAGCCCAAAGTTaGCATCTTTGGACATCTCCA +
Preference number: 4 (lower is better)
Translates to: RVEPPVLGEAVLQMQWVTAGAQS*HLWTSP
Trigger: TGGAGATGTCCAAAGATGCCAACTTTGGGCTCCGGC...TGTCACCCACTGCATCTGGAGTACAGCTTCTCCTAGGACAGGCGGCTCTACCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp CCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCCTCCAGCACCCCTCTTACGCCGGAGCCCAAAGTTaGCATCTTTGGACATCTCCA +
Preference number: 4 (lower is better)
Translates to: PRHGLRFVAVHVLQHPSYAGAQS*HLWTSP
Trigger: TGGAGATGTCCAAAGATGCCAACTTTGGGCTCCGGC...GTAAGAGGGGTGCTGGAGGACATGGACAGCGACAAACCTGAGGCCGTGTCTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp CCTGGCCAGGAGATACCGTGGAGAAGGCACGTGTTTGAGTTGGCATCACTGTCCGGCCAGGAGATACCGTaGAGAAGGCACGTGTTTGAG +
Preference number: 4 (lower is better)
Translates to: PGQEIPWRRHVFELASLSGQEIP*RRHVFE
Trigger: CTCAAACACGTGCCTTCTCCACGGTATCTCCTGGCC...GGACAGTGATGCCAACTCAAACACGTGCCTTCTCCACGGTATCTCCTGGCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp ACCACAAGGAGCTGCATTATGATGTGTGACTTAGGTCTTGGTTGGAGGGCTGAGCACCAGGGTGCAGCCTaGTGCATGGTCCGGGGCTTG +
Preference number: 4 (lower is better)
Translates to: TTRSCIMMCDLGLGWRAEHQGAA*CMVRGL
Trigger: CAAGCCCCGGACCATGCACCAGGCTGCACCCTGGTG...CTCAGCCCTCCAACCAAGACCTAAGTCACACATCATAATGCAGCTCCTTGTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp CCAGGAAGACACACACAGTGCTGCTGCCTAATCCTCTCTTTATTTGGTCTCTGCAGCCCTGCCCTTCGCTaGAAGGGGCCGGAACGAAGG +
Preference number: 4 (lower is better)
Translates to: PGRHTQCCCLILSLFGLCSPALR*KGPERR
Trigger: CCTTCGTTCCGGCCCCTTCCAGCGAAGGGCAGGGCT...GCAGAGACCAAATAAAGAGAGGATTAGGCAGCAGCACTGTGTGTGTCTTCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397325.6
ENST00000671997.1
CDS-3UTR CCA 90 bp TCGTGCCAGCCTCCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCCTCCAGTCACATCGTGGCAGGTaGTTTCTGGGTTTCTGTCTG +
Preference number: 4 (lower is better)
Translates to: SCQPPRHGLRFVAVHVLQSHRGR*FLGFCL
Trigger: CAGACAGAAACCCAGAAACCACCTGCCACGATGTGA...CTGGAGGACATGGACAGCGACAAACCTGAGGCCGTGTCTAGGAGGCTGGCACGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397325.6
ENST00000671997.1
CDS-3UTR GCA 90 bp ACCACAAGGAGCTGCATTATGATGTGTGACTTAGGTCTTGGTTGGAGGGCTGAGGCCGGTAGTCGGGGATaGTCCGATCGAGGGAGATGC +
Preference number: 4 (lower is better)
Translates to: TTRSCIMMCDLGLGWRAEAGSRG*SDRGRC
Trigger: GCATCTCCCTCGATCGGAGCATCCCCGACTACCGGC...CTCAGCCCTCCAACCAAGACCTAAGTCACACATCATAATGCAGCTCCTTGTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328957.13
ENST00000672944.1
CDS-3UTR GCA 90 bp ACCACAAGGAGCTGCATTATGATGTGTGACTTAGGTCTTGGTTGGAGGGCTGAGCGCCATACACCTCCATaGCGGGGTCCAGCAGCCCAA +
Preference number: 4 (lower is better)
Translates to: TTRSCIMMCDLGLGWRAERHTPP*RGPAAQ
Trigger: TTGGGCTGCTGGACCCCGGCATGGAGGTGTATGGCG...CTCAGCCCTCCAACCAAGACCTAAGTCACACATCATAATGCAGCTCCTTGTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000411988.6
ENST00000672816.1
ENST00000672944.1
CDS-3UTR GCA 90 bp AAACTGTATTTATTAAAACAGGCAAGGGGCTGGGCTGCGGCAGGGCCCAGGTGCACTGCCACACCCTCATaGCCAGTTCTACGTTCTCGC +
Preference number: 4 (lower is better)
Translates to: KLYLLKQARGWAAAGPRCTATPS*PVLRSR
Trigger: GCGAGAACGTAGAACTGGGCATGAGGGTGTGGCAGT...GCACCTGGGCCCTGCCGCAGCCCAGCCCCTTGCCTGTTTTAATAAATACAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328957.13
ENST00000672944.1
CDS-3UTR GCA 90 bp ACCACAAGGAGCTGCATTATGATGTGTGACTTAGGTCTTGGTTGGAGGGCTGAGTGTAGGGCTTCCTGGTaGGCTCGATGTGGGCCACGC +
Preference number: 4 (lower is better)
Translates to: TTRSCIMMCDLGLGWRAECRASW*ARCGPR
Trigger: GCGTGGCCCACATCGAGCGCACCAGGAAGCCCTACA...CTCAGCCCTCCAACCAAGACCTAAGTCACACATCATAATGCAGCTCCTTGTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR GCA 90 bp CCAGGAAGACACACACAGTGCTGCTGCCTAATCCTCTCTTTATTTGGTCTCTGCTGGGCATGCGGCCCGTaGCGTCATCCACCAGACACT +
Preference number: 4 (lower is better)
Translates to: PGRHTQCCCLILSLFGLCWACGP*RHPPDT
Trigger: AGTGTCTGGTGGATGACGGCACGGGCCGCATGCCCA...GCAGAGACCAAATAAAGAGAGGATTAGGCAGCAGCACTGTGTGTGTCTTCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000671997.1
ENST00000672944.1
CDS-3UTR GCA 90 bp CCTGGCCAGGAGATACCGTGGAGAAGGCACGTGTTTGAGTTGGCATCACTGTCCGTGGGGTCAGTGCCGTaGGTGTTTGATCCAGTTTCT +
Preference number: 4 (lower is better)
Translates to: PGQEIPWRRHVFELASLSVGSVP*VFDPVS
Trigger: AGAAACTGGATCAAACACGCACGGCACTGACCCCAC...GGACAGTGATGCCAACTCAAACACGTGCCTTCTCCACGGTATCTCCTGGCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR GCA 90 bp GTCCTCCAGCACCCCTCTTACCAGACCACAAGGAGCTGCATTATGATGTGTGACTATGGGCCTCGGACCTaGTCCTCTTCACTCTCTGCC +
Preference number: 4 (lower is better)
Translates to: VLQHPSYQTTRSCIMMCDYGPRT*SSSLSA
Trigger: GGCAGAGAGTGAAGAGGAGCAGGTCCGAGGCCCATA...GTCACACATCATAATGCAGCTCCTTGTGGTCTGGTAAGAGGGGTGCTGGAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411988.6
ENST00000672816.1
CDS-3UTR CCA 90 bp GTCCTCCAGCACCCCTCTTACCAGACCACAAGGAGCTGCATTATGATGTGTGACTCTGTCTGCACTTTCTaGGCCGGTAGTCGGGGATGC +
Preference number: 4 (lower is better)
Translates to: VLQHPSYQTTRSCIMMCDSVCTF*AGSRGC
Trigger: GCATCCCCGACTACCGGCCCAGAAAGTGCAGACAGA...GTCACACATCATAATGCAGCTCCTTGTGGTCTGGTAAGAGGGGTGCTGGAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328957.13
ENST00000672944.1
CDS-3UTR CCA 90 bp CCAGGAAGACACACACAGTGCTGCTGCCTAATCCTCTCTTTATTTGGTCTCTGCAAAGAAGCCGACGACTaGGGCGGTGGCCGCCTTCCA +
Preference number: 4 (lower is better)
Translates to: PGRHTQCCCLILSLFGLCKEADD*GGGRLP
Trigger: TGGAAGGCGGCCACCGCCCCAGTCGTCGGCTTCTTT...GCAGAGACCAAATAAAGAGAGGATTAGGCAGCAGCACTGTGTGTGTCTTCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328957.13
ENST00000672944.1
CDS-3UTR CCA 90 bp GTCCTCCAGCACCCCTCTTACCAGACCACAAGGAGCTGCATTATGATGTGTGACTGTTGTAGGGCTTCCTaGTGCGCTCGATGTGGGCCA +
Preference number: 4 (lower is better)
Translates to: VLQHPSYQTTRSCIMMCDCCRAS*CARCGP
Trigger: TGGCCCACATCGAGCGCACCAGGAAGCCCTACAACA...GTCACACATCATAATGCAGCTCCTTGTGGTCTGGTAAGAGGGGTGCTGGAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp CGGGTAGAGCCGCCTGTCCTAGGAGAAGCTGTACTCCAGATGCAGTGGGTGACACAGGCCATGTACACGTaGGACTTGAAGTCATCCATC +
Preference number: 4 (lower is better)
Translates to: RVEPPVLGEAVLQMQWVTQAMYT*DLKSSI
Trigger: GATGGATGACTTCAAGTCCCACGTGTACATGGCCTG...TGTCACCCACTGCATCTGGAGTACAGCTTCTCCTAGGACAGGCGGCTCTACCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp GTCCTCCAGCACCCCTCTTACCAGACCACAAGGAGCTGCATTATGATGTGTGACCCCGAAGTCCACCCCTaGGTTCGACATGGGGATGTT +
Preference number: 4 (lower is better)
Translates to: VLQHPSYQTTRSCIMMCDPEVHP*VRHGDV
Trigger: AACATCCCCATGTCGAACCCAGGGGTGGACTTCGGG...GTCACACATCATAATGCAGCTCCTTGTGGTCTGGTAAGAGGGGTGCTGGAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp AGAAGCTGTACTCCAGATGCAGTGGGTGACACCCTGGTCACTCAGCCACACCCCCCAGACAGTAGGCACTaGCTTTGCTGTTTCTCACCT +
Preference number: 4 (lower is better)
Translates to: RSCTPDAVGDTLVTQPHPPDSRH*LCCFSP
Trigger: AGGTGAGAAACAGCAAAGCCAGTGCCTACTGTCTGG...GGGGTGTGGCTGAGTGACCAGGGTGTCACCCACTGCATCTGGAGTACAGCTTCT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp AAGCAGTCGTGCCAGCCTCCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCCAAAGTTGGCATCTTTaGACATCTCCACCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: KQSCQPPRHGLRFVAVHVQSWHL*TSPPPG
Trigger: GCCTGGAGGTGGAGATGTCCAAAGATGCCAACTTTG...GACATGGACAGCGACAAACCTGAGGCCGTGTCTAGGAGGCTGGCACGACTGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR GCA 90 bp AAACTGTATTTATTAAAACAGGCAAGGGGCTGGGCTGCGGCAGGGCCCAGGTGCGCGTTCGCATACTGCTaGACCTCAAACGTGCTGTAC +
Preference number: 4 (lower is better)
Translates to: KLYLLKQARGWAAAGPRCAFAYC*TSNVLY
Trigger: GTACAGCACGTTTGAGGTGCAGCAGTATGCGAACGC...GCACCTGGGCCCTGCCGCAGCCCAGCCCCTTGCCTGTTTTAATAAATACAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328957.13
ENST00000672944.1
CDS-3UTR GCA 90 bp GTCCTCCAGCACCCCTCTTACCAGACCACAAGGAGCTGCATTATGATGTGTGACACTGCCACACCCTCATaGCCAGTTCTACGTTCTCGC +
Preference number: 4 (lower is better)
Translates to: VLQHPSYQTTRSCIMMCDTATPS*PVLRSR
Trigger: GCGAGAACGTAGAACTGGGCATGAGGGTGTGGCAGT...GTCACACATCATAATGCAGCTCCTTGTGGTCTGGTAAGAGGGGTGCTGGAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328957.13
ENST00000672944.1
CDS-3UTR GCA 90 bp CCAGGAAGACACACACAGTGCTGCTGCCTAATCCTCTCTTTATTTGGTCTCTGCCGGCGCGCAGGGCGTTaGGCTTGGCATAGTAGTCAA +
Preference number: 4 (lower is better)
Translates to: PGRHTQCCCLILSLFGLCRRAGR*AWHSSQ
Trigger: TTGACTACTATGCCAAGCGCAACGCCCTGCGCGCCG...GCAGAGACCAAATAAAGAGAGGATTAGGCAGCAGCACTGTGTGTGTCTTCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000671997.1
ENST00000672944.1
CDS-3UTR GCA 90 bp ACCACAAGGAGCTGCATTATGATGTGTGACTTAGGTCTTGGTTGGAGGGCTGAGTGGAAGACACCAGGGTaGAGCCTGGTGCATGGTCCG +
Preference number: 4 (lower is better)
Translates to: TTRSCIMMCDLGLGWRAEWKTPG*SLVHGP
Trigger: CGGACCATGCACCAGGCTGCACCCTGGTGTCTTCCA...CTCAGCCCTCCAACCAAGACCTAAGTCACACATCATAATGCAGCTCCTTGTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR GCA 90 bp ACTGTATTTATTAAAACAGGCAAGGGGCTGGGCTGCGGCAGGGCCCAGGTGCCTGGAAGACACACACAGTaGTGCTGCCTAATCCTCTCT +
Preference number: 4 (lower is better)
Translates to: TVFIKTGKGLGCGRAQVPGRHTQ*CCLILS
Trigger: AGAGAGGATTAGGCAGCAGCACTGTGTGTGTCTTCC...AGGCACCTGGGCCCTGCCGCAGCCCAGCCCCTTGCCTGTTTTAATAAATACAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000671997.1
ENST00000672944.1
CDS-3UTR GCA 90 bp CCAGGAAGACACACACAGTGCTGCTGCCTAATCCTCTCTTTATTTGGTCTCTGCGAACGAAGGAAGCTCTaGAGGGGCGGGACAGAGCCT +
Preference number: 4 (lower is better)
Translates to: PGRHTQCCCLILSLFGLCERRKL*RGGTEP
Trigger: AGGCTCTGTCCCGCCCCTGCAGAGCTTCCTTCGTTC...GCAGAGACCAAATAAAGAGAGGATTAGGCAGCAGCACTGTGTGTGTCTTCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397325.6
ENST00000671997.1
CDS-3UTR GCA 90 bp TCGTGCCAGCCTCCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCCTCCAGCTCCTCTTCACTCTCTaGCGTGTTTTTCTTCCTCTT +
Preference number: 4 (lower is better)
Translates to: SCQPPRHGLRFVAVHVLQLLFTL*RVFLPL
Trigger: AAGAGGAAGAAAAACACGGCAGAGAGTGAAGAGGAG...CTGGAGGACATGGACAGCGACAAACCTGAGGCCGTGTCTAGGAGGCTGGCACGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000411988.6
ENST00000672816.1
CDS-3UTR CCA 90 bp TCGTGCCAGCCTCCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCCTCCAGCGCTTGTTGACGTACTaGTCCAGATTGAACTTGAGT +
Preference number: 4 (lower is better)
Translates to: SCQPPRHGLRFVAVHVLQRLLTY*SRLNLS
Trigger: ACTCAAGTTCAATCTGGACCAGTACGTCAACAAGCG...CTGGAGGACATGGACAGCGACAAACCTGAGGCCGTGTCTAGGAGGCTGGCACGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328957.13
ENST00000672944.1
CDS-3UTR CCA 90 bp AGGAAGACACACACAGTGCTGCTGCCTAATCCTCTCTTTATTTGGTCTCTGCTGCACACTTCTTCAGGGTaGGCATGCGGCCCGTGCCGT +
Preference number: 4 (lower is better)
Translates to: RKTHTVLLPNPLFIWSLLHTSSG*ACGPCR
Trigger: ACGGCACGGGCCGCATGCCCACCCTGAAGAAGTGTG...CAGCAGAGACCAAATAAAGAGAGGATTAGGCAGCAGCACTGTGTGTGTCTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000671997.1
ENST00000672944.1
CDS-3UTR CCA 90 bp CCAGGAAGACACACACAGTGCTGCTGCCTAATCCTCTCTTTATTTGGTCTCTGCACAATGGGGCCACTCTaGGTGAAGTCCCACAGCCGC +
Preference number: 4 (lower is better)
Translates to: PGRHTQCCCLILSLFGLCTMGPL*VKSHSR
Trigger: GCGGCTGTGGGACTTCACCCAGAGTGGCCCCATTGT...GCAGAGACCAAATAAAGAGAGGATTAGGCAGCAGCACTGTGTGTGTCTTCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000671997.1
ENST00000672944.1
CDS-3UTR CCA 90 bp ACTGTATTTATTAAAACAGGCAAGGGGCTGGGCTGCGGCAGGGCCCAGGTGCCTCAAAGTTGGCATCTTTaGACATCTCCACCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: TVFIKTGKGLGCGRAQVPQSWHL*TSPPPG
Trigger: GCCTGGAGGTGGAGATGTCCAAAGATGCCAACTTTG...AGGCACCTGGGCCCTGCCGCAGCCCAGCCCCTTGCCTGTTTTAATAAATACAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000671997.1
ENST00000672944.1
CDS-3UTR CCA 90 bp AAACTGTATTTATTAAAACAGGCAAGGGGCTGGGCTGCGGCAGGGCCCAGGTGCGCCGGAGCCCAAAGTTaGCATCTTTGGACATCTCCA +
Preference number: 4 (lower is better)
Translates to: KLYLLKQARGWAAAGPRCAGAQS*HLWTSP
Trigger: TGGAGATGTCCAAAGATGCCAACTTTGGGCTCCGGC...GCACCTGGGCCCTGCCGCAGCCCAGCCCCTTGCCTGTTTTAATAAATACAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000671997.1
ENST00000672944.1
CDS-3UTR CCA 90 bp CCAGGAAGACACACACAGTGCTGCTGCCTAATCCTCTCTTTATTTGGTCTCTGCCAGCCTCTGCTGTCCTaGCCGCACATAGAGCCCTGT +
Preference number: 4 (lower is better)
Translates to: PGRHTQCCCLILSLFGLCQPLLS*PHIEPC
Trigger: ACAGGGCTCTATGTGCGGCCAGGACAGCAGAGGCTG...GCAGAGACCAAATAAAGAGAGGATTAGGCAGCAGCACTGTGTGTGTCTTCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000671997.1
ENST00000672944.1
CDS-3UTR CCA 90 bp AGGAAGACACACACAGTGCTGCTGCCTAATCCTCTCTTTATTTGGTCTCTGCTGAGGCTGCTTGGAGCATaGGAGGCCTGCGGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: RKTHTVLLPNPLFIWSLLRLLGA*EACGWK
Trigger: CTTCCACCCGCAGGCCTCCCATGCTCCAAGCAGCCT...CAGCAGAGACCAAATAAAGAGAGGATTAGGCAGCAGCACTGTGTGTGTCTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000671997.1
ENST00000672944.1
CDS-3UTR CCA 90 bp CCTGGCCAGGAGATACCGTGGAGAAGGCACGTGTTTGAGTTGGCATCACTGTCCTCACATCGTGGCAGGTaGTTTCTGGGTTTCTGTCTG +
Preference number: 4 (lower is better)
Translates to: PGQEIPWRRHVFELASLSSHRGR*FLGFCL
Trigger: CAGACAGAAACCCAGAAACCACCTGCCACGATGTGA...GGACAGTGATGCCAACTCAAACACGTGCCTTCTCCACGGTATCTCCTGGCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397325.6
ENST00000671997.1
CDS-3UTR TCA 90 bp GTCCTCCAGCACCCCTCTTACCAGACCACAAGGAGCTGCATTATGATGTGTGACTGTACACGTGGGACTTaGAGTCATCCATCCACACCT +
Preference number: 4 (lower is better)
Translates to: VLQHPSYQTTRSCIMMCDCTRGT*SHPSTP
Trigger: AGGTGTGGATGGATGACTTCAAGTCCCACGTGTACA...GTCACACATCATAATGCAGCTCCTTGTGGTCTGGTAAGAGGGGTGCTGGAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR TCA 90 bp ACCACAAGGAGCTGCATTATGATGTGTGACTTAGGTCTTGGTTGGAGGGCTGAGTCACCTCTCCGTACGTaGGGGTGTTGTTGTAGACCC +
Preference number: 4 (lower is better)
Translates to: TTRSCIMMCDLGLGWRAESPLRT*GCCCRP
Trigger: GGGTCTACAACAACACCCTCACGTACGGAGAGGTGA...CTCAGCCCTCCAACCAAGACCTAAGTCACACATCATAATGCAGCTCCTTGTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR GCA 90 bp CGGGTAGAGCCGCCTGTCCTAGGAGAAGCTGTACTCCAGATGCAGTGGGTGACACAGACCACAAGGAGCTaGATTATGATGTGTGACTTA +
Preference number: 4 (lower is better)
Translates to: RVEPPVLGEAVLQMQWVTQTTRS*IMMCDL
Trigger: TAAGTCACACATCATAATGCAGCTCCTTGTGGTCTG...TGTCACCCACTGCATCTGGAGTACAGCTTCTCCTAGGACAGGCGGCTCTACCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR GCA 90 bp AGAGCCGCCTGTCCTAGGAGAAGCTGTACTCCAGATGCAGTGGGTGACACCCTGCACACACAGTGCTGCTaGCTAATCCTCTCTTTATTT +
Preference number: 4 (lower is better)
Translates to: RAACPRRSCTPDAVGDTLHTQCC*LILSLF
Trigger: AAATAAAGAGAGGATTAGGCAGCAGCACTGTGTGTG...CAGGGTGTCACCCACTGCATCTGGAGTACAGCTTCTCCTAGGACAGGCGGCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000671997.1
ENST00000672944.1
CDS-3UTR GCA 90 bp GTCCTCCAGCACCCCTCTTACCAGACCACAAGGAGCTGCATTATGATGTGTGACGGAAGACACACACAGTaGTGCTGCCTAATCCTCTCT +
Preference number: 4 (lower is better)
Translates to: VLQHPSYQTTRSCIMMCDGRHTQ*CCLILS
Trigger: AGAGAGGATTAGGCAGCAGCACTGTGTGTGTCTTCC...GTCACACATCATAATGCAGCTCCTTGTGGTCTGGTAAGAGGGGTGCTGGAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000671997.1
ENST00000672944.1
CDS-3UTR CCA 90 bp GTCCTCCAGCACCCCTCTTACCAGACCACAAGGAGCTGCATTATGATGTGTGACCCAGACAGTAGGCACTaGCTTTGCTGTTTCTCACCT +
Preference number: 4 (lower is better)
Translates to: VLQHPSYQTTRSCIMMCDPDSRH*LCCFSP
Trigger: AGGTGAGAAACAGCAAAGCCAGTGCCTACTGTCTGG...GTCACACATCATAATGCAGCTCCTTGTGGTCTGGTAAGAGGGGTGCTGGAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp CCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCCTCCAGCACCCCTCTTACTTTACCTTATCTTGCTaGAACCCTTCTGTTTCCCTC +
Preference number: 4 (lower is better)
Translates to: PRHGLRFVAVHVLQHPSYFTLSC*NPSVSL
Trigger: GAGGGAAACAGAAGGGTTCCAGCAAGATAAGGTAAA...GTAAGAGGGGTGCTGGAGGACATGGACAGCGACAAACCTGAGGCCGTGTCTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411988.6
ENST00000672816.1
CDS-3UTR TCA 90 bp AGGAAGACACACACAGTGCTGCTGCCTAATCCTCTCTTTATTTGGTCTCTGCTGTCACCTCTCCGTACGTaGGGGTGTTGTTGTAGACCC +
Preference number: 4 (lower is better)
Translates to: RKTHTVLLPNPLFIWSLLSPLRT*GCCCRP
Trigger: GGGTCTACAACAACACCCTCACGTACGGAGAGGTGA...CAGCAGAGACCAAATAAAGAGAGGATTAGGCAGCAGCACTGTGTGTGTCTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000671997.1
ENST00000672944.1
CDS-3UTR TCA 90 bp CCAGGAAGACACACACAGTGCTGCTGCCTAATCCTCTCTTTATTTGGTCTCTGCTTATTTGGTCTCTGCTaGAGCAGTCGTGCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: PGRHTQCCCLILSLFGLCLFGLC*SSRASL
Trigger: GAGGCTGGCACGACTGCTTCAGCAGAGACCAAATAA...GCAGAGACCAAATAAAGAGAGGATTAGGCAGCAGCACTGTGTGTGTCTTCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000671997.1
ENST00000672944.1
CDS-3UTR GCA 90 bp AGGAAGACACACACAGTGCTGCTGCCTAATCCTCTCTTTATTTGGTCTCTGCTGCGGAGAACAGGACGATaGCCACGAACACCAGGATGT +
Preference number: 4 (lower is better)
Translates to: RKTHTVLLPNPLFIWSLLRRTGR*PRTPGC
Trigger: ACATCCTGGTGTTCGTGGGCATCGTCCTGTTCTCCG...CAGCAGAGACCAAATAAAGAGAGGATTAGGCAGCAGCACTGTGTGTGTCTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328957.13
ENST00000672944.1
CDS-3UTR GCA 90 bp AGGAAGACACACACAGTGCTGCTGCCTAATCCTCTCTTTATTTGGTCTCTGCTGCTGATCATCCACTTCTaGCCCGAGCACCTCTGTACC +
Preference number: 4 (lower is better)
Translates to: RKTHTVLLPNPLFIWSLLLIIHF*PEHLCT
Trigger: GGTACAGAGGTGCTCGGGGCAGAAGTGGATGATCAG...CAGCAGAGACCAAATAAAGAGAGGATTAGGCAGCAGCACTGTGTGTGTCTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000671997.1
ENST00000672944.1
CDS-3UTR GCA 90 bp CCAGGAAGACACACACAGTGCTGCTGCCTAATCCTCTCTTTATTTGGTCTCTGCGTGGGGTCAGTGCCGTaGGTGTTTGATCCAGTTTCT +
Preference number: 4 (lower is better)
Translates to: PGRHTQCCCLILSLFGLCVGSVP*VFDPVS
Trigger: AGAAACTGGATCAAACACGCACGGCACTGACCCCAC...GCAGAGACCAAATAAAGAGAGGATTAGGCAGCAGCACTGTGTGTGTCTTCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000671997.1
ENST00000672944.1
CDS-3UTR GCA 90 bp CCTGGCCAGGAGATACCGTGGAGAAGGCACGTGTTTGAGTTGGCATCACTGTCCCAGACCACAAGGAGCTaGATTATGATGTGTGACTTA +
Preference number: 4 (lower is better)
Translates to: PGQEIPWRRHVFELASLSQTTRS*IMMCDL
Trigger: TAAGTCACACATCATAATGCAGCTCCTTGTGGTCTG...GGACAGTGATGCCAACTCAAACACGTGCCTTCTCCACGGTATCTCCTGGCCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR GCA 90 bp ACCACAAGGAGCTGCATTATGATGTGTGACTTAGGTCTTGGTTGGAGGGCTGAGAGCGAACCGCGTTTCTaGATCAGGTTCACATCGTGG +
Preference number: 4 (lower is better)
Translates to: TTRSCIMMCDLGLGWRAESEPRF*IRFTSW
Trigger: CCACGATGTGAACCTGATGCAGAAACGCGGTTCGCT...CTCAGCCCTCCAACCAAGACCTAAGTCACACATCATAATGCAGCTCCTTGTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397325.6
ENST00000671997.1
CDS-3UTR CCA 90 bp ACCACAAGGAGCTGCATTATGATGTGTGACTTAGGTCTTGGTTGGAGGGCTGAGGCAGGGCGTTGCGCTTaGCATAGTAGTCAATGTCGT +
Preference number: 4 (lower is better)
Translates to: TTRSCIMMCDLGLGWRAEAGRCA*HSSQCR
Trigger: ACGACATTGACTACTATGCCAAGCGCAACGCCCTGC...CTCAGCCCTCCAACCAAGACCTAAGTCACACATCATAATGCAGCTCCTTGTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp ACCACAAGGAGCTGCATTATGATGTGTGACTTAGGTCTTGGTTGGAGGGCTGAGCATCCACCAGACACTTaGAGTCAGGCAAGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: TTRSCIMMCDLGLGWRAEHPPDT*SQARRL
Trigger: CAGCCTTCTTGCCTGACTCCAAGTGTCTGGTGGATG...CTCAGCCCTCCAACCAAGACCTAAGTCACACATCATAATGCAGCTCCTTGTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR TCA 90 bp ACCACAAGGAGCTGCATTATGATGTGTGACTTAGGTCTTGGTTGGAGGGCTGAGTGTACACGTGGGACTTaGAGTCATCCATCCACACCT +
Preference number: 4 (lower is better)
Translates to: TTRSCIMMCDLGLGWRAECTRGT*SHPSTP
Trigger: AGGTGTGGATGGATGACTTCAAGTCCCACGTGTACA...CTCAGCCCTCCAACCAAGACCTAAGTCACACATCATAATGCAGCTCCTTGTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR TCA 90 bp GTCCTCCAGCACCCCTCTTACCAGACCACAAGGAGCTGCATTATGATGTGTGACCTGCATTATGATGTGTaGCTTAGGTCTTGGTTGGAG +
Preference number: 4 (lower is better)
Translates to: VLQHPSYQTTRSCIMMCDLHYDV*LRSWLE
Trigger: CTCCAACCAAGACCTAAGTCACACATCATAATGCAG...GTCACACATCATAATGCAGCTCCTTGTGGTCTGGTAAGAGGGGTGCTGGAGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR GCA 90 bp AGGAAGACACACACAGTGCTGCTGCCTAATCCTCTCTTTATTTGGTCTCTGCTGGTGGGGTCAGTGCCGTaGGTGTTTGATCCAGTTTCT +
Preference number: 4 (lower is better)
Translates to: RKTHTVLLPNPLFIWSLLVGSVP*VFDPVS
Trigger: AGAAACTGGATCAAACACGCACGGCACTGACCCCAC...CAGCAGAGACCAAATAAAGAGAGGATTAGGCAGCAGCACTGTGTGTGTCTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000671997.1
ENST00000672944.1
CDS-3UTR GCA 90 bp GTCCTCCAGCACCCCTCTTACCAGACCACAAGGAGCTGCATTATGATGTGTGACCTCCTCTTCACTCTCTaGCGTGTTTTTCTTCCTCTT +
Preference number: 4 (lower is better)
Translates to: VLQHPSYQTTRSCIMMCDLLFTL*RVFLPL
Trigger: AAGAGGAAGAAAAACACGGCAGAGAGTGAAGAGGAG...GTCACACATCATAATGCAGCTCCTTGTGGTCTGGTAAGAGGGGTGCTGGAGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000411988.6
ENST00000672816.1
CDS-3UTR CCA 90 bp ACCACAAGGAGCTGCATTATGATGTGTGACTTAGGTCTTGGTTGGAGGGCTGAGCAGGCCATGTACACGTaGGACTTGAAGTCATCCATC +
Preference number: 4 (lower is better)
Translates to: TTRSCIMMCDLGLGWRAEQAMYT*DLKSSI
Trigger: GATGGATGACTTCAAGTCCCACGTGTACATGGCCTG...CTCAGCCCTCCAACCAAGACCTAAGTCACACATCATAATGCAGCTCCTTGTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp AGGAAGACACACACAGTGCTGCTGCCTAATCCTCTCTTTATTTGGTCTCTGCTGGCCGGAGCCCAAAGTTaGCATCTTTGGACATCTCCA +
Preference number: 4 (lower is better)
Translates to: RKTHTVLLPNPLFIWSLLAGAQS*HLWTSP
Trigger: TGGAGATGTCCAAAGATGCCAACTTTGGGCTCCGGC...CAGCAGAGACCAAATAAAGAGAGGATTAGGCAGCAGCACTGTGTGTGTCTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000671997.1
ENST00000672944.1
CDS-3UTR CCA 90 bp AGGAAGACACACACAGTGCTGCTGCCTAATCCTCTCTTTATTTGGTCTCTGCTGAATCTTCACGAGGCCTaGGTACCGCTTGTTGACGTA +
Preference number: 4 (lower is better)
Translates to: RKTHTVLLPNPLFIWSLLNLHEA*VPLVDV
Trigger: TACGTCAACAAGCGGTACCCAGGCCTCGTGAAGATT...CAGCAGAGACCAAATAAAGAGAGGATTAGGCAGCAGCACTGTGTGTGTCTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328957.13
ENST00000672944.1
CDS-3UTR CCA 90 bp ACCACAAGGAGCTGCATTATGATGTGTGACTTAGGTCTTGGTTGGAGGGCTGAGATCAGGTTCACATCGTaGCAGGTGGTTTCTGGGTTT +
Preference number: 4 (lower is better)
Translates to: TTRSCIMMCDLGLGWRAEIRFTS*QVVSGF
Trigger: AAACCCAGAAACCACCTGCCACGATGTGAACCTGAT...CTCAGCCCTCCAACCAAGACCTAAGTCACACATCATAATGCAGCTCCTTGTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397325.6
ENST00000671997.1
CDS-3UTR TCA 90 bp ACCACAAGGAGCTGCATTATGATGTGTGACTTAGGTCTTGGTTGGAGGGCTGAGCTGCATTATGATGTGTaGCTTAGGTCTTGGTTGGAG +
Preference number: 4 (lower is better)
Translates to: TTRSCIMMCDLGLGWRAELHYDV*LRSWLE
Trigger: CTCCAACCAAGACCTAAGTCACACATCATAATGCAG...CTCAGCCCTCCAACCAAGACCTAAGTCACACATCATAATGCAGCTCCTTGTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CCA 90 bp AGGAAGACACACACAGTGCTGCTGCCTAATCCTCTCTTTATTTGGTCTCTGCTGATCAGGTTCACATCGTaGCAGGTGGTTTCTGGGTTT +
Preference number: 4 (lower is better)
Translates to: RKTHTVLLPNPLFIWSLLIRFTS*QVVSGF
Trigger: AAACCCAGAAACCACCTGCCACGATGTGAACCTGAT...CAGCAGAGACCAAATAAAGAGAGGATTAGGCAGCAGCACTGTGTGTGTCTTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397325.6
ENST00000671997.1
CDS-3UTR GCA 90 bp CCAGGAAGACACACACAGTGCTGCTGCCTAATCCTCTCTTTATTTGGTCTCTGCCACACACAGTGCTGCTaGCTAATCCTCTCTTTATTT +
Preference number: 4 (lower is better)
Translates to: PGRHTQCCCLILSLFGLCHTQCC*LILSLF
Trigger: AAATAAAGAGAGGATTAGGCAGCAGCACTGTGTGTG...GCAGAGACCAAATAAAGAGAGGATTAGGCAGCAGCACTGTGTGTGTCTTCCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000671997.1
ENST00000672944.1
CDS-3UTR GCA 90 bp AGGAAGACACACACAGTGCTGCTGCCTAATCCTCTCTTTATTTGGTCTCTGCTGCACACACAGTGCTGCTaGCTAATCCTCTCTTTATTT +
Preference number: 4 (lower is better)
Translates to: RKTHTVLLPNPLFIWSLLHTQCC*LILSLF
Trigger: AAATAAAGAGAGGATTAGGCAGCAGCACTGTGTGTG...CAGCAGAGACCAAATAAAGAGAGGATTAGGCAGCAGCACTGTGTGTGTCTTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000671997.1
ENST00000672944.1
CDS GCA 90 bp GGATGGCCTCACGGTCCCCCAGCGTGCCCACCTTGGCGTGTCGGCTaGGCACCCGGCGGTCGCCGCTCACGATGCGCACGAGCTCCTGGG +
Preference number: 5 (lower is better)
Translates to: GWPHGPPACPPWRVG*APGGRRSRCARAPG
Trigger: CCCAGGAGCTCGTGCGCATCGTGAGCGGCGACCGCCGGGTGCGCAGCCGACACGCCAAGGTGGGCACGCTGGGGGACCGTGAGGCCATCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000424720.6
ENST00000672944.1
ENST00000673497.1
CDS GCA 90 bp CCAGGTGGTCCAGGCGCTGCAGGATGGCCTCACGGTCCCCCAGCGTaGCCACCTTGGCGTGTCGGCTGCGCACCCGGCGGTCGCCGCTCA +
Preference number: 5 (lower is better)
Translates to: PGGPGAAGWPHGPPA*PPWRVGCAPGGRRS
Trigger: TGAGCGGCGACCGCCGGGTGCGCAGCCGACACGCCAAGGTGGGCACGCTGGGGGACCGTGAGGCCATCCTGCAGCGCCTGGACCACCTGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000424720.6
ENST00000672944.1
ENST00000673497.1
CDS CCA 90 bp CCAGGCGCTGCAGGATGGCCTCACGGTCCCCCAGCGTGCCCACCTTaGCGTGTCGGCTGCGCACCCGGCGGTCGCCGCTCACGATGCGCA +
Preference number: 5 (lower is better)
Translates to: PGAAGWPHGPPACPP*RVGCAPGGRRSRCA
Trigger: TGCGCATCGTGAGCGGCGACCGCCGGGTGCGCAGCCGACACGCCAAGGTGGGCACGCTGGGGGACCGTGAGGCCATCCTGCAGCGCCTGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000424720.6
ENST00000672944.1
ENST00000673497.1
CDS-3UTR CAA 90 bp CGGGCACACCCCGGTCACTCAGCCACACTGGCTCGGCCCAGCGCCTTCCCGAGGCCCAGCGTGCCCACCTaGGCGTGTCGGCTGCGCACC +
Preference number: 5 (lower is better)
Translates to: RAHPGHSATLARPSAFPRPSVPT*ACRLRT
Trigger: GGTGCGCAGCCGACACGCCAAGGTGGGCACGCTGGG...CCTCGGGAAGGCGCTGGGCCGAGCCAGTGTGGCTGAGTGACCGGGGTGTGCCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328957.13
ENST00000672944.1
CDS GCA 90 bp GGGTCCGGCTCCTTCCCCGGGATGGTGGAGTCCGCGGCGCCGCCGTaGCAGGCTGAAGTTGGCCTTTGCATCCCGAGGGAGCGAACCGCG +
Preference number: 5 (lower is better)
Translates to: GSGSFPGMVESAAPP*QAEVGLCIPRERTA
Trigger: CGCGGTTCGCTCCCTCGGGATGCAAAGGCCAACTTCAGCCTGGCACGGCGGCGCCGCGGACTCCACCATCCCGGGGAAGGAGCCGGACCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000397325.6
ENST00000538356.1
ENST00000541995.5
ENST00000542942.1
ENST00000671997.1
ENST00000672032.1
ENST00000672682.1
ENST00000673376.1
CDS CCA 90 bp CGGCTGCGCACCCGGCGGTCGCCGCTCACGATGCGCACGAGCTCCTaGGAGCGGCCCTGCAGGCGGCAGTACACGGAGAACAGGACGATG +
Preference number: 5 (lower is better)
Translates to: RLRTRRSPLTMRTSS*ERPCRRQYTENRTM
Trigger: CATCGTCCTGTTCTCCGTGTACTGCCGCCTGCAGGGCCGCTCCCAGGAGCTCGTGCGCATCGTGAGCGGCGACCGCCGGGTGCGCAGCCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000424720.6
ENST00000672944.1
ENST00000673497.1
CDS CCA 90 bp GCTGCCGCCACACTGCCACACAGGGGTCCGGCTCCTTCCCCGGGATaGTGGAGTCCGCGGCGCCGCCGTGCCAGGCTGAAGTTGGCCTTT +
Preference number: 5 (lower is better)
Translates to: AAATLPHRGPAPSPG*WSPRRRRARLKLAF
Trigger: AAAGGCCAACTTCAGCCTGGCACGGCGGCGCCGCGGACTCCACCATCCCGGGGAAGGAGCCGGACCCCTGTGTGGCAGTGTGGCGGCAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397325.6
ENST00000541995.5
ENST00000671997.1
ENST00000673376.1
CDS-3UTR CAA 90 bp TGTCTGCCGGGCACACCCCGGTCACTCAGCCACACTGGCTCGGCCCAGCGCCTTGCTGGGGGAGGCTGCTaGGAGCATGGGAGGCCTGCG +
Preference number: 5 (lower is better)
Translates to: CLPGTPRSLSHTGSAQRLAGGGC*EHGRPA
Trigger: CGCAGGCCTCCCATGCTCCAAGCAGCCTCCCCCAGC...AAGGCGCTGGGCCGAGCCAGTGTGGCTGAGTGACCGGGGTGTGCCCGGCAGACA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS GCA 90 bp CGGCGGTCGCCGCTCACGATGCGCACGAGCTCCTGGGAGCGGCCCTaGAGGCGGCAGTACACGGAGAACAGGACGATGCCCACGAACACC +
Preference number: 5 (lower is better)
Translates to: RRSPLTMRTSSWERP*RRQYTENRTMPTNT
Trigger: GGTGTTCGTGGGCATCGTCCTGTTCTCCGTGTACTGCCGCCTGCAGGGCCGCTCCCAGGAGCTCGTGCGCATCGTGAGCGGCGACCGCCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000424720.6
ENST00000672944.1
ENST00000673497.1
CDS CCA 90 bp CCACAGTCCCACGTCACCCACAGGGGTCCGGCTCCTTCCCCGGGATaGTGGAGTCCGCGGCGCCGCCGTGCCAGGCTGAAGTTGGCCTTT +
Preference number: 5 (lower is better)
Translates to: PQSHVTHRGPAPSPG*WSPRRRRARLKLAF
Trigger: AAAGGCCAACTTCAGCCTGGCACGGCGGCGCCGCGGACTCCACCATCCCGGGGAAGGAGCCGGACCCCTGTGGGTGACGTGGGACTGTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000538356.1
ENST00000542942.1
ENST00000672032.1
ENST00000672682.1
CDS-3UTR CAA 90 bp CGGGCACACCCCGGTCACTCAGCCACACTGGCTCGGCCCAGCGCCTTCCCGAGGTCGGCCCAGCCCGTGTaGAACTCGACGTGGGCATCA +
Preference number: 5 (lower is better)
Translates to: RAHPGHSATLARPSAFPRSAQPV*NSTWAS
Trigger: TGATGCCCACGTCGAGTTCAACACGGGCTGGGCCGA...CCTCGGGAAGGCGCTGGGCCGAGCCAGTGTGGCTGAGTGACCGGGGTGTGCCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328957.13
ENST00000672944.1
CDS TCA 90 bp ATCCAGAGTCCGGGGCAGGAGGGAGCCGCTCCCTCCTCGCCGAGATaGCCACACAGCACGCAGCTAACGCCAGGCTCCCTGACCCCGGTC +
Preference number: 5 (lower is better)
Translates to: IQSPGQEGAAPSSPR*PHSTQLTPGSLTPV
Trigger: GACCGGGGTCAGGGAGCCTGGCGTTAGCTGCGTGCTGTGTGGTCATCTCGGCGAGGAGGGAGCGGCTCCCTCCTGCCCCGGACTCTGGAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000538356.1
ENST00000542942.1
ENST00000672032.1
ENST00000672682.1
CDS CCA 90 bp GTCACTCAGCCACACTGGCTCGGCCCAGCGCCTTCCCGAGGTCTGTaGGGGTCCGGGCGGAGGTGGGGTCAGTGCCGTGCGTGTTTGATC +
Preference number: 5 (lower is better)
Translates to: VTQPHWLGPAPSRGL*GSGRRWGQCRACLI
Trigger: GATCAAACACGCACGGCACTGACCCCACCTCCGCCCGGACCCCCACAGACCTCGGGAAGGCGCTGGGCCGAGCCAGTGTGGCTGAGTGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS CCA 90 bp CCCGAATCAGCTCGCCCCACTTCAATGGTGGCAAGGTGCCCTTCCTaGGGGCGGGCAGCCCAGGACCCACAGCCGGGACCCTGTAGGCTC +
Preference number: 5 (lower is better)
Translates to: PESARPTSMVARCPS*GRAAQDPQPGPCRL
Trigger: GAGCCTACAGGGTCCCGGCTGTGGGTCCTGGGCTGCCCGCCCCCAGGAAGGGCACCTTGCCACCATTGAAGTGGGGCGAGCTGATTCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614360.1
ENST00000672872.1
CDS CCA 90 bp TCCACTTCGCAGGCTGCCGTCTCTGGACCTCGTGTGCCTTCCCCGTaGCTCTGCGCCACGCCTTCCCATCCCCAGCCACACCCGGCTCAC +
Preference number: 5 (lower is better)
Translates to: STSQAAVSGPRVPSP*LCATPSHPQPHPAH
Trigger: GTGAGCCGGGTGTGGCTGGGGATGGGAAGGCGTGGCGCAGAGCCACGGGGAAGGCACACGAGGTCCAGAGACGGCAGCCTGCGAAGTGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614360.1
ENST00000672872.1
CDS-3UTR CAA 90 bp GGGGCTGTGGTACATGCAGAGGCGGCGGCTGTCCCAGCAGCCTGGCCAGGAGATTGCATGGTCCGGGGCTaGGCCTCCCTATGGGGCGTG +
Preference number: 5 (lower is better)
Translates to: GAVVHAEAAAVPAAWPGDCMVRG*ASLWGV
Trigger: CACGCCCCATAGGGAGGCCAAGCCCCGGACCATGCA...ATCTCCTGGCCAGGCTGCTGGGACAGCCGCCGCCTCTGCATGTACCACAGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CAA 90 bp CTGCTGTCCTGGCCGCACATAGAGCCCTGTCCTGCTGTGTCTGCCGGGCACACCGCTGGGGGAGGCTGCTaGGAGCATGGGAGGCCTGCG +
Preference number: 5 (lower is better)
Translates to: LLSWPHIEPCPAVSAGHTAGGGC*EHGRPA
Trigger: CGCAGGCCTCCCATGCTCCAAGCAGCCTCCCCCAGC...GGTGTGCCCGGCAGACACAGCAGGACAGGGCTCTATGTGCGGCCAGGACAGCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CAA 90 bp GGGCTGTGGTACATGCAGAGGCGGCGGCTGTCCCAGCAGCCTGGCCAGGAGATAGCTGGGGGAGGCTGCTaGGAGCATGGGAGGCCTGCG +
Preference number: 5 (lower is better)
Translates to: GLWYMQRRRLSQQPGQEIAGGGC*EHGRPA
Trigger: CGCAGGCCTCCCATGCTCCAAGCAGCCTCCCCCAGC...TATCTCCTGGCCAGGCTGCTGGGACAGCCGCCGCCTCTGCATGTACCACAGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS TCA 90 bp CTCCTTCCCCGGGATGGTGGAGTCCGCGGCGCCGCCGTGCCAGGCTaGAGTTGGCCTTTGCATCCCGAGGGAGCGAACCGCGTTTCTGCA +
Preference number: 5 (lower is better)
Translates to: LLPRDGGVRGAAVPG*SWPLHPEGANRVSA
Trigger: TGCAGAAACGCGGTTCGCTCCCTCGGGATGCAAAGGCCAACTTCAGCCTGGCACGGCGGCGCCGCGGACTCCACCATCCCGGGGAAGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000397325.6
ENST00000538356.1
ENST00000541995.5
ENST00000542942.1
ENST00000671997.1
ENST00000672032.1
ENST00000672682.1
ENST00000673376.1
CDS TCA 90 bp CTCTGCGCCACGCCTTCCCATCCCCAGCCACACCCGGCTCACCTTTaGGCTCGACGCCATGGCCACTGTCTCCCGCACACGGGCCTTAGG +
Preference number: 5 (lower is better)
Translates to: LCATPSHPQPHPAHL*ARRHGHCLPHTGLR
Trigger: CCTAAGGCCCGTGTGCGGGAGACAGTGGCCATGGCGTCGAGCTCAAAGGTGAGCCGGGTGTGGCTGGGGATGGGAAGGCGTGGCGCAGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614360.1
ENST00000672872.1
CDS CCA 90 bp CCGCCTCGGCCTGGGGTTCCTGTTCTTGCTCAGGGCCGCTGCTGCTaGCTGCCTCCTGGTTTCCAGCTGTGCCCGAATCAGCTCGCCCCA +
Preference number: 5 (lower is better)
Translates to: PPRPGVPVLAQGRCC*LPPGFQLCPNQLAP
Trigger: TGGGGCGAGCTGATTCGGGCACAGCTGGAAACCAGGAGGCAGCCAGCAGCAGCGGCCCTGAGCAAGAACAGGAACCCCAGGCCGAGGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614360.1
ENST00000672872.1
CDS CCA 90 bp ACCATGTTGGCCAGGCTGGTCTCGTGTGATGCGCCCGCCTCGGCCTaGGGTTCCTGTTCTTGCTCAGGGCCGCTGCTGCTGGCTGCCTCC +
Preference number: 5 (lower is better)
Translates to: TMLARLVSCDAPASA*GSCSCSGPLLLAAS
Trigger: GGAGGCAGCCAGCAGCAGCGGCCCTGAGCAAGAACAGGAACCCCAGGCCGAGGCGGGCGCATCACACGAGACCAGCCTGGCCAACATGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614360.1
ENST00000672872.1
CDS-3UTR CAA 90 bp GTCTTGGTTGGAGGGCTGAGCGGCCGCAAGTGCTGGGGGAGGCTGCTTGGAGCACCCACAGCCGCTGTGTaGGCCGCGCCACATCCTCAC +
Preference number: 5 (lower is better)
Translates to: VLVGGLSGRKCWGRLLGAPTAAV*AAPHPH
Trigger: GTGAGGATGTGGCGCGGCCAACACAGCGGCTGTGGG...TGCTCCAAGCAGCCTCCCCCAGCACTTGCGGCCGCTCAGCCCTCCAACCAAGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CAA 90 bp GGGCTGTGGTACATGCAGAGGCGGCGGCTGTCCCAGCAGCCTGGCCAGGAGATATGCATGGTCCGGGGCTaGGCCTCCCTATGGGGCGTG +
Preference number: 5 (lower is better)
Translates to: GLWYMQRRRLSQQPGQEICMVRG*ASLWGV
Trigger: CACGCCCCATAGGGAGGCCAAGCCCCGGACCATGCA...TATCTCCTGGCCAGGCTGCTGGGACAGCCGCCGCCTCTGCATGTACCACAGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CAA 90 bp GTCTTGGTTGGAGGGCTGAGCGGCCGCAAGTGCTGGGGGAGGCTGCTTGGAGCATGCATGGTCCGGGGCTaGGCCTCCCTATGGGGCGTG +
Preference number: 5 (lower is better)
Translates to: VLVGGLSGRKCWGRLLGACMVRG*ASLWGV
Trigger: CACGCCCCATAGGGAGGCCAAGCCCCGGACCATGCA...TGCTCCAAGCAGCCTCCCCCAGCACTTGCGGCCGCTCAGCCCTCCAACCAAGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CAA 90 bp TGTCTGCCGGGCACACCCCGGTCACTCAGCCACACTGGCTCGGCCCAGCGCCTTCGTGCCAGGCTGAAGTaGGCCTTTGCATCCCGAGGG +
Preference number: 5 (lower is better)
Translates to: CLPGTPRSLSHTGSAQRLRARLK*AFASRG
Trigger: CCCTCGGGATGCAAAGGCCAACTTCAGCCTGGCACG...AAGGCGCTGGGCCGAGCCAGTGTGGCTGAGTGACCGGGGTGTGCCCGGCAGACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397325.6
ENST00000671997.1
CDS GCA 90 bp CTGGTCTCGTGTGATGCGCCCGCCTCGGCCTGGGGTTCCTGTTCTTaGTCAGGGCCGCTGCTGCTGGCTGCCTCCTGGTTTCCAGCTGTG +
Preference number: 5 (lower is better)
Translates to: LVSCDAPASAWGSCS*SGPLLLAASWFPAV
Trigger: CACAGCTGGAAACCAGGAGGCAGCCAGCAGCAGCGGCCCTGAGCAAGAACAGGAACCCCAGGCCGAGGCGGGCGCATCACACGAGACCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614360.1
ENST00000672872.1
CDS-3UTR CAA 90 bp CGGGCACACCCCGGTCACTCAGCCACACTGGCTCGGCCCAGCGCCTTCCCGAGGGGAGAAGGCACGTGTTaGAGTTGGCATCACTGTCCC +
Preference number: 5 (lower is better)
Translates to: RAHPGHSATLARPSAFPRGEGTC*SWHHCP
Trigger: GGGACAGTGATGCCAACTCAAACACGTGCCTTCTCC...CCTCGGGAAGGCGCTGGGCCGAGCCAGTGTGGCTGAGTGACCGGGGTGTGCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CAA 90 bp CAGCCTCCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCCTCCAGCACCCCGCTGGGGGAGGCTGCTaGGAGCATGGGAGGCCTGCG +
Preference number: 5 (lower is better)
Translates to: QPPRHGLRFVAVHVLQHPAGGGC*EHGRPA
Trigger: CGCAGGCCTCCCATGCTCCAAGCAGCCTCCCCCAGC...GGGGTGCTGGAGGACATGGACAGCGACAAACCTGAGGCCGTGTCTAGGAGGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CAA 90 bp TGTCTGCCGGGCACACCCCGGTCACTCAGCCACACTGGCTCGGCCCAGCGCCTTGACACGGCCTCAGGTTaGTCGCTGTCCATGTCCTCC +
Preference number: 5 (lower is better)
Translates to: CLPGTPRSLSHTGSAQRLDTASG*SLSMSS
Trigger: GGAGGACATGGACAGCGACAAACCTGAGGCCGTGTC...AAGGCGCTGGGCCGAGCCAGTGTGGCTGAGTGACCGGGGTGTGCCCGGCAGACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS GCA 90 bp AAGGAAGCTCTGCAGGGGCGGGACAGAGCCTCGTCCTCCATCGTCTaGCCACCCGTCTTCAGAAGCGCCTGGCACACTGGCCTCTGGGAC +
Preference number: 5 (lower is better)
Translates to: KEALQGRDRASSSIV*PPVFRSAWHTGLWD
Trigger: GTCCCAGAGGCCAGTGTGCCAGGCGCTTCTGAAGACGGGTGGGCAGACGATGGAGGACGAGGCTCTGTCCCGCCCCTGCAGAGCTTCCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538356.1
ENST00000672682.1
CDS GCA 90 bp CTCGGCCTGGGGTTCCTGTTCTTGCTCAGGGCCGCTGCTGCTGGCTaGCTCCTGGTTTCCAGCTGTGCCCGAATCAGCTCGCCCCACTTC +
Preference number: 5 (lower is better)
Translates to: LGLGFLFLLRAAAAG*LLVSSCARISSPHF
Trigger: GAAGTGGGGCGAGCTGATTCGGGCACAGCTGGAAACCAGGAGGCAGCCAGCAGCAGCGGCCCTGAGCAAGAACAGGAACCCCAGGCCGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614360.1
ENST00000672872.1
CDS CCA 90 bp CTCGGCCCAGCGCCTTCCCGAGGTCTGTGGGGGTCCGGGCGGAGGTaGGGTCAGTGCCGTGCGTGTTTGATCCAGTTTCTGATCATCCAC +
Preference number: 5 (lower is better)
Translates to: LGPAPSRGLWGSGRR*GQCRACLIQFLIIH
Trigger: GTGGATGATCAGAAACTGGATCAAACACGCACGGCACTGACCCCACCTCCGCCCGGACCCCCACAGACCTCGGGAAGGCGCTGGGCCGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CAA 90 bp AGAAGCTGTACTCCAGATGCAGTGGGTGACACCCTGGTCACTCAGCCACACCCCCCCAGCGTGCCCACCTaGGCGTGTCGGCTGCGCACC +
Preference number: 5 (lower is better)
Translates to: RSCTPDAVGDTLVTQPHPPSVPT*ACRLRT
Trigger: GGTGCGCAGCCGACACGCCAAGGTGGGCACGCTGGG...GGGGTGTGGCTGAGTGACCAGGGTGTCACCCACTGCATCTGGAGTACAGCTTCT
66% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000328957.13
ENST00000672944.1
CDS-3UTR CAA 90 bp CAGCCTCCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCCTCCAGCACCCCTGCATGGTCCGGGGCTaGGCCTCCCTATGGGGCGTG +
Preference number: 5 (lower is better)
Translates to: QPPRHGLRFVAVHVLQHPCMVRG*ASLWGV
Trigger: CACGCCCCATAGGGAGGCCAAGCCCCGGACCATGCA...GGGGTGCTGGAGGACATGGACAGCGACAAACCTGAGGCCGTGTCTAGGAGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CAA 90 bp GGGCTGTGGTACATGCAGAGGCGGCGGCTGTCCCAGCAGCCTGGCCAGGAGATACGTGCCAGGCTGAAGTaGGCCTTTGCATCCCGAGGG +
Preference number: 5 (lower is better)
Translates to: GLWYMQRRRLSQQPGQEIRARLK*AFASRG
Trigger: CCCTCGGGATGCAAAGGCCAACTTCAGCCTGGCACG...TATCTCCTGGCCAGGCTGCTGGGACAGCCGCCGCCTCTGCATGTACCACAGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397325.6
ENST00000671997.1
CDS CCA 90 bp TCTTCAGGGTGGGCATGCGGCCCGTGCCGTCATCCACCAGACACTTaGAGTCAGGCAAGAAGGCTGTGGAGCCCAGAGGCCCCAGCTGCA +
Preference number: 5 (lower is better)
Translates to: SSGWACGPCRHPPDT*SQARRLWSPEAPAA
Trigger: TGCAGCTGGGGCCTCTGGGCTCCACAGCCTTCTTGCCTGACTCCAAGTGTCTGGTGGATGACGGCACGGGCCGCATGCCCACCCTGAAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000541995.5
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
ENST00000673376.1
CDS CCA 90 bp GCTCACAATGGGGCCACTCTGGGTGAAGTCCCACAGCCGCTGTGTTaGCCGCGCCACATCCTCACACTTCTTCAGGGTGGGCATGCGGCC +
Preference number: 5 (lower is better)
Translates to: AHNGATLGEVPQPLC*PRHILTLLQGGHAA
Trigger: GGCCGCATGCCCACCCTGAAGAAGTGTGAGGATGTGGCGCGGCCAACACAGCGGCTGTGGGACTTCACCCAGAGTGGCCCCATTGTGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000541995.5
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
ENST00000673376.1
CDS-3UTR CAA 90 bp TGTCTGCCGGGCACACCCCGGTCACTCAGCCACACTGGCTCGGCCCAGCGCCTTAGGCACGTGTTTGAGTaGGCATCACTGTCCCCAGAC +
Preference number: 5 (lower is better)
Translates to: CLPGTPRSLSHTGSAQRLRHVFE*ASLSPD
Trigger: GTCTGGGGACAGTGATGCCAACTCAAACACGTGCCT...AAGGCGCTGGGCCGAGCCAGTGTGGCTGAGTGACCGGGGTGTGCCCGGCAGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CAA 90 bp CCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCCTCCAGCACCCCTCTTACGCTGGGGGAGGCTGCTaGGAGCATGGGAGGCCTGCG +
Preference number: 5 (lower is better)
Translates to: PRHGLRFVAVHVLQHPSYAGGGC*EHGRPA
Trigger: CGCAGGCCTCCCATGCTCCAAGCAGCCTCCCCCAGC...GTAAGAGGGGTGCTGGAGGACATGGACAGCGACAAACCTGAGGCCGTGTCTAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CAA 90 bp GTCTTGGTTGGAGGGCTGAGCGGCCGCAAGTGCTGGGGGAGGCTGCTTGGAGCAGACACGGCCTCAGGTTaGTCGCTGTCCATGTCCTCC +
Preference number: 5 (lower is better)
Translates to: VLVGGLSGRKCWGRLLGADTASG*SLSMSS
Trigger: GGAGGACATGGACAGCGACAAACCTGAGGCCGTGTC...TGCTCCAAGCAGCCTCCCCCAGCACTTGCGGCCGCTCAGCCCTCCAACCAAGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS GCA 90 bp CACTTGGAGTCAGGCAAGAAGGCTGTGGAGCCCAGAGGCCCCAGCTaGAGCAGTCCATCAGCGCTGTACCGCACCAGCTGGGAGGACATC +
Preference number: 5 (lower is better)
Translates to: HLESGKKAVEPRGPS*SSPSALYRTSWEDI
Trigger: GATGTCCTCCCAGCTGGTGCGGTACAGCGCTGATGGACTGCTGCAGCTGGGGCCTCTGGGCTCCACAGCCTTCTTGCCTGACTCCAAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000541995.5
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
ENST00000673376.1
CDS GCA 90 bp GCCGCGCCACATCCTCACACTTCTTCAGGGTGGGCATGCGGCCCGTaGCGTCATCCACCAGACACTTGGAGTCAGGCAAGAAGGCTGTGG +
Preference number: 5 (lower is better)
Translates to: AAPHPHTSSGWACGP*RHPPDTWSQARRLW
Trigger: CCACAGCCTTCTTGCCTGACTCCAAGTGTCTGGTGGATGACGGCACGGGCCGCATGCCCACCCTGAAGAAGTGTGAGGATGTGGCGCGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000541995.5
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
ENST00000673376.1
CDS GCA 90 bp ATGGTGGAGTCCGCGGCGCCGCCGTGCCAGGCTGAAGTTGGCCTTTaGATCCCGAGGGAGCGAACCGCGTTTCTGCATCAGGTTCACATC +
Preference number: 5 (lower is better)
Translates to: MVESAAPPCQAEVGL*IPRERTAFLHQVHI
Trigger: GATGTGAACCTGATGCAGAAACGCGGTTCGCTCCCTCGGGATGCAAAGGCCAACTTCAGCCTGGCACGGCGGCGCCGCGGACTCCACCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000397325.6
ENST00000538356.1
ENST00000541995.5
ENST00000542942.1
ENST00000671997.1
ENST00000672032.1
ENST00000672682.1
ENST00000673376.1
CDS GCA 90 bp CTTGCTCAGGGCCGCTGCTGCTGGCTGCCTCCTGGTTTCCAGCTGTaGCCGAATCAGCTCGCCCCACTTCAATGGTGGCAAGGTGCCCTT +
Preference number: 5 (lower is better)
Translates to: LAQGRCCWLPPGFQL*PNQLAPLQWWQGAL
Trigger: AAGGGCACCTTGCCACCATTGAAGTGGGGCGAGCTGATTCGGGCACAGCTGGAAACCAGGAGGCAGCCAGCAGCAGCGGCCCTGAGCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614360.1
ENST00000672872.1
CDS CCA 90 bp CCGTGCCGTCATCCACCAGACACTTGGAGTCAGGCAAGAAGGCTGTaGAGCCCAGAGGCCCCAGCTGCAGCAGTCCATCAGCGCTGTACC +
Preference number: 5 (lower is better)
Translates to: PCRHPPDTWSQARRL*SPEAPAAAVHQRCT
Trigger: GGTACAGCGCTGATGGACTGCTGCAGCTGGGGCCTCTGGGCTCCACAGCCTTCTTGCCTGACTCCAAGTGTCTGGTGGATGACGGCACGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000541995.5
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
ENST00000673376.1
CDS CCA 90 bp ACAGCCGCTGTGTTGGCCGCGCCACATCCTCACACTTCTTCAGGGTaGGCATGCGGCCCGTGCCGTCATCCACCAGACACTTGGAGTCAG +
Preference number: 5 (lower is better)
Translates to: TAAVLAAPHPHTSSG*ACGPCRHPPDTWSQ
Trigger: CTGACTCCAAGTGTCTGGTGGATGACGGCACGGGCCGCATGCCCACCCTGAAGAAGTGTGAGGATGTGGCGCGGCCAACACAGCGGCTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000541995.5
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
ENST00000673376.1
CDS CCA 90 bp ATTCACGGTGGGCACTTGGCCTCACGGCATCAGCCTGACCTTTTCTaGGCCGGTAGTCGGGGATGCTCCGATCGAGGGAGATGCGGTCGC +
Preference number: 5 (lower is better)
Translates to: IHGGHLASRHQPDLF*AGSRGCSDRGRCGR
Trigger: GCGACCGCATCTCCCTCGATCGGAGCATCCCCGACTACCGGCCCAGAAAAGGTCAGGCTGATGCCGTGAGGCCAAGTGCCCACCGTGAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000540493.1
ENST00000673050.1
CDS-3UTR CAA 90 bp TCGTGCCAGCCTCCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCCTCCAGACCAGGCCGATGGGCTaGGCAAGGCCGTTGAGCTGG +
Preference number: 5 (lower is better)
Translates to: SCQPPRHGLRFVAVHVLQTRPMG*ARPLSW
Trigger: CCAGCTCAACGGCCTTGCCAAGCCCATCGGCCTGGT...CTGGAGGACATGGACAGCGACAAACCTGAGGCCGTGTCTAGGAGGCTGGCACGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328957.13
ENST00000672944.1
CDS-3UTR CAA 90 bp GTCTTGGTTGGAGGGCTGAGCGGCCGCAAGTGCTGGGGGAGGCTGCTTGGAGCAAGGCCTGGGTACCGCTaGTTGACGTACTGGTCCAGA +
Preference number: 5 (lower is better)
Translates to: VLVGGLSGRKCWGRLLGARPGYR*LTYWSR
Trigger: TCTGGACCAGTACGTCAACAAGCGGTACCCAGGCCT...TGCTCCAAGCAGCCTCCCCCAGCACTTGCGGCCGCTCAGCCCTCCAACCAAGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328957.13
ENST00000672944.1
CDS-3UTR CAA 90 bp TGTCTGCCGGGCACACCCCGGTCACTCAGCCACACTGGCTCGGCCCAGCGCCTTCCAAAGTTGGCATCTTaGGACATCTCCACCTCCAGG +
Preference number: 5 (lower is better)
Translates to: CLPGTPRSLSHTGSAQRLPKLAS*DISTSR
Trigger: CCTGGAGGTGGAGATGTCCAAAGATGCCAACTTTGG...AAGGCGCTGGGCCGAGCCAGTGTGGCTGAGTGACCGGGGTGTGCCCGGCAGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS TCA 90 bp TGGGCCGGTAGTCGGGGATGCTCCGATCGAGGGAGATGCGGTCGCTaGGCTGAGCGTTGTAGCCGTACTCCTCATACTTGCCTTCCGCCT +
Preference number: 5 (lower is better)
Translates to: WAGSRGCSDRGRCGR*AERCSRTPHTCLPP
Trigger: AGGCGGAAGGCAAGTATGAGGAGTACGGCTACAACGCTCAGCTCAGCGACCGCATCTCCCTCGATCGGAGCATCCCCGACTACCGGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000424720.6
ENST00000540493.1
ENST00000672944.1
ENST00000673050.1
ENST00000673497.1
CDS GCA 90 bp GCTGTGTTGGCCGCGCCACATCCTCACACTTCTTCAGGGTGGGCATaGGGCCCGTGCCGTCATCCACCAGACACTTGGAGTCAGGCAAGA +
Preference number: 5 (lower is better)
Translates to: AVLAAPHPHTSSGWA*GPCRHPPDTWSQAR
Trigger: TCTTGCCTGACTCCAAGTGTCTGGTGGATGACGGCACGGGCCGCATGCCCACCCTGAAGAAGTGTGAGGATGTGGCGCGGCCAACACAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000541995.5
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
ENST00000673376.1
CDS CCA 90 bp TGGGGTTCCTGTTCTTGCTCAGGGCCGCTGCTGCTGGCTGCCTCCTaGTTTCCAGCTGTGCCCGAATCAGCTCGCCCCACTTCAATGGTG +
Preference number: 5 (lower is better)
Translates to: WGSCSCSGPLLLAAS*FPAVPESARPTSMV
Trigger: CACCATTGAAGTGGGGCGAGCTGATTCGGGCACAGCTGGAAACCAGGAGGCAGCCAGCAGCAGCGGCCCTGAGCAAGAACAGGAACCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614360.1
ENST00000672872.1
CDS-3UTR CAA 90 bp AGAAGCTGTACTCCAGATGCAGTGGGTGACACCCTGGTCACTCAGCCACACCCCTGGGAGGGCGTGTGGTaGACCACGCTGTGCACGGAG +
Preference number: 5 (lower is better)
Translates to: RSCTPDAVGDTLVTQPHPWEGVW*TTLCTE
Trigger: CTCCGTGCACAGCGTGGTCAACCACACGCCCTCCCA...GGGGTGTGGCTGAGTGACCAGGGTGTCACCCACTGCATCTGGAGTACAGCTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328957.13
ENST00000672944.1
CDS-3UTR CAA 90 bp TGTCTGCCGGGCACACCCCGGTCACTCAGCCACACTGGCTCGGCCCAGCGCCTTATGTACACGTGGGACTaGAAGTCATCCATCCACACC +
Preference number: 5 (lower is better)
Translates to: CLPGTPRSLSHTGSAQRLMYTWD*KSSIHT
Trigger: GGTGTGGATGGATGACTTCAAGTCCCACGTGTACAT...AAGGCGCTGGGCCGAGCCAGTGTGGCTGAGTGACCGGGGTGTGCCCGGCAGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CAA 90 bp GGGGCTGTGGTACATGCAGAGGCGGCGGCTGTCCCAGCAGCCTGGCCAGGAGATTTCTCCAGGTACCACTaGAAGCTGCGACACTTCAGC +
Preference number: 5 (lower is better)
Translates to: GAVVHAEAAAVPAAWPGDFSRYH*KLRHFS
Trigger: GCTGAAGTGTCGCAGCTTCAAGTGGTACCTGGAGAA...ATCTCCTGGCCAGGCTGCTGGGACAGCCGCCGCCTCTGCATGTACCACAGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CAA 90 bp GGGGAGGCTGCTTGGAGCATGGGAGGCCTGCGGGTGGAAGACACCAGGGTGCAGTCATCCACCAGACACTaGGAGTCAGGCAAGAAGGCT +
Preference number: 5 (lower is better)
Translates to: GEAAWSMGGLRVEDTRVQSSTRH*ESGKKA
Trigger: AGCCTTCTTGCCTGACTCCAAGTGTCTGGTGGATGA...CTGCACCCTGGTGTCTTCCACCCGCAGGCCTCCCATGCTCCAAGCAGCCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CAA 90 bp GGGGCTGTGGTACATGCAGAGGCGGCGGCTGTCCCAGCAGCCTGGCCAGGAGATTCATCCACCAGACACTaGGAGTCAGGCAAGAAGGCT +
Preference number: 5 (lower is better)
Translates to: GAVVHAEAAAVPAAWPGDSSTRH*ESGKKA
Trigger: AGCCTTCTTGCCTGACTCCAAGTGTCTGGTGGATGA...ATCTCCTGGCCAGGCTGCTGGGACAGCCGCCGCCTCTGCATGTACCACAGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CAA 90 bp CTGCTGTCCTGGCCGCACATAGAGCCCTGTCCTGCTGTGTCTGCCGGGCACACCAGCCGGAGCCCAAAGTaGGCATCTTTGGACATCTCC +
Preference number: 5 (lower is better)
Translates to: LLSWPHIEPCPAVSAGHTSRSPK*ASLDIS
Trigger: GGAGATGTCCAAAGATGCCAACTTTGGGCTCCGGCT...GGTGTGCCCGGCAGACACAGCAGGACAGGGCTCTATGTGCGGCCAGGACAGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CAA 90 bp GGGCTGTGGTACATGCAGAGGCGGCGGCTGTCCCAGCAGCCTGGCCAGGAGATAAGCCGGAGCCCAAAGTaGGCATCTTTGGACATCTCC +
Preference number: 5 (lower is better)
Translates to: GLWYMQRRRLSQQPGQEISRSPK*ASLDIS
Trigger: GGAGATGTCCAAAGATGCCAACTTTGGGCTCCGGCT...TATCTCCTGGCCAGGCTGCTGGGACAGCCGCCGCCTCTGCATGTACCACAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CAA 90 bp GTCTTGGTTGGAGGGCTGAGCGGCCGCAAGTGCTGGGGGAGGCTGCTTGGAGCAAGGCACGTGTTTGAGTaGGCATCACTGTCCCCAGAC +
Preference number: 5 (lower is better)
Translates to: VLVGGLSGRKCWGRLLGARHVFE*ASLSPD
Trigger: GTCTGGGGACAGTGATGCCAACTCAAACACGTGCCT...TGCTCCAAGCAGCCTCCCCCAGCACTTGCGGCCGCTCAGCCCTCCAACCAAGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CAA 90 bp CTGCTGTCCTGGCCGCACATAGAGCCCTGTCCTGCTGTGTCTGCCGGGCACACCGGAGAAGGCACGTGTTaGAGTTGGCATCACTGTCCC +
Preference number: 5 (lower is better)
Translates to: LLSWPHIEPCPAVSAGHTGEGTC*SWHHCP
Trigger: GGGACAGTGATGCCAACTCAAACACGTGCCTTCTCC...GGTGTGCCCGGCAGACACAGCAGGACAGGGCTCTATGTGCGGCCAGGACAGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CAA 90 bp CAGCCTCCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCCTCCAGCACCCCGACACGGCCTCAGGTTaGTCGCTGTCCATGTCCTCC +
Preference number: 5 (lower is better)
Translates to: QPPRHGLRFVAVHVLQHPDTASG*SLSMSS
Trigger: GGAGGACATGGACAGCGACAAACCTGAGGCCGTGTC...GGGGTGCTGGAGGACATGGACAGCGACAAACCTGAGGCCGTGTCTAGGAGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS GCA 90 bp CCTGGGAGCGGCCCTGCAGGCGGCAGTACACGGAGAACAGGACGATaGCCACGAACACCAGGATGTTCACCGTCAGCAAAGTTCGGATCT +
Preference number: 5 (lower is better)
Translates to: PGSGPAGGSTRRTGR*PRTPGCSPSAKFGS
Trigger: AGATCCGAACTTTGCTGACGGTGAACATCCTGGTGTTCGTGGGCATCGTCCTGTTCTCCGTGTACTGCCGCCTGCAGGGCCGCTCCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000424720.6
ENST00000672944.1
ENST00000673497.1
CDS GCA 90 bp ACACCCTCATGCCCAGTTCTACGTTCTCGCCGCCATACACCTCCATaGCGGGGTCCAGCAGCCCAATGTCTCCGAAGTACTCGCGGTCCA +
Preference number: 5 (lower is better)
Translates to: TPSCPVLRSRRHTPP*RGPAAQCLRSTRGP
Trigger: TGGACCGCGAGTACTTCGGAGACATTGGGCTGCTGGACCCCGGCATGGAGGTGTATGGCGGCGAGAACGTAGAACTGGGCATGAGGGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328957.13
ENST00000672944.1
CDS GCA 90 bp TCACCCTCATGCCCAGTTCTACGTTCTCGCCGCCATACACCTCCATaGCGGGGTCCAGCAGCCCAATGTCTCCGAAGTACTCGCGGTCCA +
Preference number: 5 (lower is better)
Translates to: SPSCPVLRSRRHTPP*RGPAAQCLRSTRGP
Trigger: TGGACCGCGAGTACTTCGGAGACATTGGGCTGCTGGACCCCGGCATGGAGGTGTATGGCGGCGAGAACGTAGAACTGGGCATGAGGGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424720.6
ENST00000673497.1
CDS CCA 90 bp ATCGTCTGCCCACCCGTCTTCAGAAGCGCCTGGCACACTGGCCTCTaGGACGACCTCCAGCAGTTTCAGCCTCCTTGTCTACCCCCAGTA +
Preference number: 5 (lower is better)
Translates to: IVCPPVFRSAWHTGL*DDLQQFQPPCLPPV
Trigger: TACTGGGGGTAGACAAGGAGGCTGAAACTGCTGGAGGTCGTCCCAGAGGCCAGTGTGCCAGGCGCTTCTGAAGACGGGTGGGCAGACGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000538356.1
ENST00000672682.1
CDS-3UTR CAA 90 bp CGGGTAGAGCCGCCTGTCCTAGGAGAAGCTGTACTCCAGATGCAGTGGGTGACACCTTCCCGCCGGCTGTaGCGGACAATCTTCACGAGG +
Preference number: 5 (lower is better)
Translates to: RVEPPVLGEAVLQMQWVTPSRRL*RTIFTR
Trigger: CCTCGTGAAGATTGTCCGCAACAGCCGGCGGGAAGG...TGTCACCCACTGCATCTGGAGTACAGCTTCTCCTAGGACAGGCGGCTCTACCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328957.13
ENST00000672944.1
CDS-3UTR CAA 90 bp CCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCCTCCAGCACCCCTCTTACCCTTCCCGCCGGCTGTaGCGGACAATCTTCACGAGG +
Preference number: 5 (lower is better)
Translates to: PRHGLRFVAVHVLQHPSYPSRRL*RTIFTR
Trigger: CCTCGTGAAGATTGTCCGCAACAGCCGGCGGGAAGG...GTAAGAGGGGTGCTGGAGGACATGGACAGCGACAAACCTGAGGCCGTGTCTAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328957.13
ENST00000672944.1
CDS-3UTR CAA 90 bp GGGGAGGCTGCTTGGAGCATGGGAGGCCTGCGGGTGGAAGACACCAGGGTGCAGATGTACACGTGGGACTaGAAGTCATCCATCCACACC +
Preference number: 5 (lower is better)
Translates to: GEAAWSMGGLRVEDTRVQMYTWD*KSSIHT
Trigger: GGTGTGGATGGATGACTTCAAGTCCCACGTGTACAT...CTGCACCCTGGTGTCTTCCACCCGCAGGCCTCCCATGCTCCAAGCAGCCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CAA 90 bp CTGCTGTCCTGGCCGCACATAGAGCCCTGTCCTGCTGTGTCTGCCGGGCACACCTTCTCCAGGTACCACTaGAAGCTGCGACACTTCAGC +
Preference number: 5 (lower is better)
Translates to: LLSWPHIEPCPAVSAGHTFSRYH*KLRHFS
Trigger: GCTGAAGTGTCGCAGCTTCAAGTGGTACCTGGAGAA...GGTGTGCCCGGCAGACACAGCAGGACAGGGCTCTATGTGCGGCCAGGACAGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CAA 90 bp GTCTTGGTTGGAGGGCTGAGCGGCCGCAAGTGCTGGGGGAGGCTGCTTGGAGCATTCTCCAGGTACCACTaGAAGCTGCGACACTTCAGC +
Preference number: 5 (lower is better)
Translates to: VLVGGLSGRKCWGRLLGAFSRYH*KLRHFS
Trigger: GCTGAAGTGTCGCAGCTTCAAGTGGTACCTGGAGAA...TGCTCCAAGCAGCCTCCCCCAGCACTTGCGGCCGCTCAGCCCTCCAACCAAGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CAA 90 bp CTGCTGTCCTGGCCGCACATAGAGCCCTGTCCTGCTGTGTCTGCCGGGCACACCTCATCCACCAGACACTaGGAGTCAGGCAAGAAGGCT +
Preference number: 5 (lower is better)
Translates to: LLSWPHIEPCPAVSAGHTSSTRH*ESGKKA
Trigger: AGCCTTCTTGCCTGACTCCAAGTGTCTGGTGGATGA...GGTGTGCCCGGCAGACACAGCAGGACAGGGCTCTATGTGCGGCCAGGACAGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CAA 90 bp CCTCAGCCTCTGCTGTCCTGGCCGCACATAGAGCCCTGTCCTGCTGTGTCTGCCGGAGAAGGCACGTGTTaGAGTTGGCATCACTGTCCC +
Preference number: 5 (lower is better)
Translates to: PQPLLSWPHIEPCPAVSAGEGTC*SWHHCP
Trigger: GGGACAGTGATGCCAACTCAAACACGTGCCTTCTCC...GGCAGACACAGCAGGACAGGGCTCTATGTGCGGCCAGGACAGCAGAGGCTGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS TCA 90 bp TACACGTTCTCCAGGTACCACTTGAAGCTGCGACACTTCAGCCTCTaGCGCAGGGCCAGCCTCTCAGACACGTCCCCGAAGTCCACCCCT +
Preference number: 5 (lower is better)
Translates to: YTFSRYHLKLRHFSL*RRASLSDTSPKSTP
Trigger: AGGGGTGGACTTCGGGGACGTGTCTGAGAGGCTGGCCCTGCGTCAGAGGCTGAAGTGTCGCAGCTTCAAGTGGTACCTGGAGAACGTGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000538356.1
ENST00000541995.5
ENST00000671997.1
ENST00000672682.1
ENST00000672816.1
ENST00000672944.1
ENST00000673376.1
CDS GCA 90 bp TTTCCCTCATGCCCAGTTCTACGTTCTCGCCGCCATACACCTCCATaGCGGGGTCCAGCAGCCCAATGTCTCCGAAGTACTCGCGGTCCA +
Preference number: 5 (lower is better)
Translates to: FPSCPVLRSRRHTPP*RGPAAQCLRSTRGP
Trigger: TGGACCGCGAGTACTTCGGAGACATTGGGCTGCTGGACCCCGGCATGGAGGTGTATGGCGGCGAGAACGTAGAACTGGGCATGAGGGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411988.6
ENST00000672816.1
CDS GCA 90 bp CTGATGTTTCCACTGTTGCTGGCCTTGGCAGCCCCAGCTGGTCTGTaGAATGGTGGGATTCACGGTGGGCACTTGGCCTCACGGCATCAG +
Preference number: 5 (lower is better)
Translates to: LMFPLLLALAAPAGL*NGGIHGGHLASRHQ
Trigger: CTGATGCCGTGAGGCCAAGTGCCCACCGTGAATCCCACCATTGCACAGACCAGCTGGGGCTGCCAAGGCCAGCAACAGTGGAAACATCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540493.1
ENST00000673050.1
CDS CCA 90 bp GATGGCTCTGATGTTTCCACTGTTGCTGGCCTTGGCAGCCCCAGCTaGTCTGTGCAATGGTGGGATTCACGGTGGGCACTTGGCCTCACG +
Preference number: 5 (lower is better)
Translates to: DGSDVSTVAGLGSPS*SVQWWDSRWALGLT
Trigger: CGTGAGGCCAAGTGCCCACCGTGAATCCCACCATTGCACAGACCAGCTGGGGCTGCCAAGGCCAGCAACAGTGGAAACATCAGAGCCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540493.1
ENST00000673050.1
CDS CCA 90 bp GGCGCCCCTCCCAGGGCCTTGGAGGAAATTCAACCCTGTCAAGCTTaGAGGCCTTCGGCGCATTTAGCCGTTGAAGGAAGTACCCACCGT +
Preference number: 5 (lower is better)
Translates to: GAPPRALEEIQPCQA*RPSAHLAVEGSTHR
Trigger: ACGGTGGGTACTTCCTTCAACGGCTAAATGCGCCGAAGGCCTCCAAGCTTGACAGGGTTGAATTTCCTCCAAGGCCCTGGGAGGGGCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614360.1
ENST00000672872.1
CDS-3UTR CAA 90 bp GTCCTCCAGCACCCCTCTTACCAGACCACAAGGAGCTGCATTATGATGTGTGACCCCACAGCCGCTGTGTaGGCCGCGCCACATCCTCAC +
Preference number: 5 (lower is better)
Translates to: VLQHPSYQTTRSCIMMCDPTAAV*AAPHPH
Trigger: GTGAGGATGTGGCGCGGCCAACACAGCGGCTGTGGG...GTCACACATCATAATGCAGCTCCTTGTGGTCTGGTAAGAGGGGTGCTGGAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CAA 90 bp TCGTGCCAGCCTCCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCCTCCAGCTGGGTTTCTGTCTGTaGTCTCTGCTCGGAGCCCTG +
Preference number: 5 (lower is better)
Translates to: SCQPPRHGLRFVAVHVLQLGFCL*SLLGAL
Trigger: CAGGGCTCCGAGCAGAGACAACAGACAGAAACCCAG...CTGGAGGACATGGACAGCGACAAACCTGAGGCCGTGTCTAGGAGGCTGGCACGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397325.6
ENST00000671997.1
CDS CCA 90 bp GAGGGAGCGAACCGCGTTTCTGCATCAGGTTCACATCGTGGCAGGTaGTTTCTGGGTTTCTGTCTGTTGTCTCTGCTCGGAGCCCTGCCC +
Preference number: 5 (lower is better)
Translates to: EGANRVSASGSHRGR*FLGFCLLSLLGALP
Trigger: GGGCAGGGCTCCGAGCAGAGACAACAGACAGAAACCCAGAAACCACCTGCCACGATGTGAACCTGATGCAGAAACGCGGTTCGCTCCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397325.6
ENST00000538356.1
ENST00000671997.1
ENST00000672682.1
CDS-3UTR CAA 90 bp GTCCTCCAGCACCCCTCTTACCAGACCACAAGGAGCTGCATTATGATGTGTGACACCAGGCCGATGGGCTaGGCAAGGCCGTTGAGCTGG +
Preference number: 5 (lower is better)
Translates to: VLQHPSYQTTRSCIMMCDTRPMG*ARPLSW
Trigger: CCAGCTCAACGGCCTTGCCAAGCCCATCGGCCTGGT...GTCACACATCATAATGCAGCTCCTTGTGGTCTGGTAAGAGGGGTGCTGGAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328957.13
ENST00000672944.1
CDS-3UTR CAA 90 bp GGGCTGTGGTACATGCAGAGGCGGCGGCTGTCCCAGCAGCCTGGCCAGGAGATATGGTCCAGATTGAACTaGAGTTCCACGTTGTCACTG +
Preference number: 5 (lower is better)
Translates to: GLWYMQRRRLSQQPGQEIWSRLN*SSTLSL
Trigger: CAGTGACAACGTGGAACTCAAGTTCAATCTGGACCA...TATCTCCTGGCCAGGCTGCTGGGACAGCCGCCGCCTCTGCATGTACCACAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328957.13
ENST00000672944.1
CDS-3UTR CAA 90 bp GGGCTGTGGTACATGCAGAGGCGGCGGCTGTCCCAGCAGCCTGGCCAGGAGATAACGTACTGGTCCAGATaGAACTTGAGTTCCACGTTG +
Preference number: 5 (lower is better)
Translates to: GLWYMQRRRLSQQPGQEITYWSR*NLSSTL
Trigger: CAACGTGGAACTCAAGTTCAATCTGGACCAGTACGT...TATCTCCTGGCCAGGCTGCTGGGACAGCCGCCGCCTCTGCATGTACCACAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328957.13
ENST00000672944.1
CDS-3UTR CAA 90 bp TCGTGCCAGCCTCCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCCTCCAGCCTGGGTACCGCTTGTaGACGTACTGGTCCAGATTG +
Preference number: 5 (lower is better)
Translates to: SCQPPRHGLRFVAVHVLQPGYRL*TYWSRL
Trigger: CAATCTGGACCAGTACGTCAACAAGCGGTACCCAGG...CTGGAGGACATGGACAGCGACAAACCTGAGGCCGTGTCTAGGAGGCTGGCACGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328957.13
ENST00000672944.1
CDS-3UTR CAA 90 bp TCGTGCCAGCCTCCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCCTCCAGGTGCTGTACTTGATGTaGTCGATGGCTGGCAGCACG +
Preference number: 5 (lower is better)
Translates to: SCQPPRHGLRFVAVHVLQVLYLM*SMAGST
Trigger: CGTGCTGCCAGCCATCGACAACATCAAGTACAGCAC...CTGGAGGACATGGACAGCGACAAACCTGAGGCCGTGTCTAGGAGGCTGGCACGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328957.13
ENST00000672944.1
CDS-3UTR CAA 90 bp CCTCAGCCTCTGCTGTCCTGGCCGCACATAGAGCCCTGTCCTGCTGTGTCTGCCTCAAACGTGCTGTACTaGATGTTGTCGATGGCTGGC +
Preference number: 5 (lower is better)
Translates to: PQPLLSWPHIEPCPAVSASNVLY*MLSMAG
Trigger: GCCAGCCATCGACAACATCAAGTACAGCACGTTTGA...GGCAGACACAGCAGGACAGGGCTCTATGTGCGGCCAGGACAGCAGAGGCTGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328957.13
ENST00000672944.1
CDS-3UTR CAA 90 bp CCTCAGCCTCTGCTGTCCTGGCCGCACATAGAGCCCTGTCCTGCTGTGTCTGCCATGTACACGTGGGACTaGAAGTCATCCATCCACACC +
Preference number: 5 (lower is better)
Translates to: PQPLLSWPHIEPCPAVSAMYTWD*KSSIHT
Trigger: GGTGTGGATGGATGACTTCAAGTCCCACGTGTACAT...GGCAGACACAGCAGGACAGGGCTCTATGTGCGGCCAGGACAGCAGAGGCTGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CAA 90 bp CCTCAGCCTCTGCTGTCCTGGCCGCACATAGAGCCCTGTCCTGCTGTGTCTGCCCAGTGCCGTGCGTGTTaGATCCAGTTTCTGATCATC +
Preference number: 5 (lower is better)
Translates to: PQPLLSWPHIEPCPAVSAQCRAC*IQFLII
Trigger: GATGATCAGAAACTGGATCAAACACGCACGGCACTG...GGCAGACACAGCAGGACAGGGCTCTATGTGCGGCCAGGACAGCAGAGGCTGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CAA 90 bp TCGTGCCAGCCTCCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCCTCCAGGGAGAAGGCACGTGTTaGAGTTGGCATCACTGTCCC +
Preference number: 5 (lower is better)
Translates to: SCQPPRHGLRFVAVHVLQGEGTC*SWHHCP
Trigger: GGGACAGTGATGCCAACTCAAACACGTGCCTTCTCC...CTGGAGGACATGGACAGCGACAAACCTGAGGCCGTGTCTAGGAGGCTGGCACGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS GCA 90 bp GGTCAGTGCCGTGCGTGTTTGATCCAGTTTCTGATCATCCACTTCTaGCCCGAGCACCTCTGTACCACCAGCCGGAGCCCAAAGTTGGCA +
Preference number: 5 (lower is better)
Translates to: GQCRACLIQFLIIHF*PEHLCTTSRSPKLA
Trigger: TGCCAACTTTGGGCTCCGGCTGGTGGTACAGAGGTGCTCGGGGCAGAAGTGGATGATCAGAAACTGGATCAAACACGCACGGCACTGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000541995.5
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
ENST00000673376.1
CDS GCA 90 bp CTGCTCCCACCAGCCCATCGCAGGTCAGAGAAAAGCCAGACGCCCTaGTCCACATCTCTCTCATACTTCTCCGCTCTTCACAACAGGCAG +
Preference number: 5 (lower is better)
Translates to: LLPPAHRRSEKSQTP*STSLSYFSALHNRQ
Trigger: CTGCCTGTTGTGAAGAGCGGAGAAGTATGAGAGAGATGTGGAGCAGGGCGTCTGGCTTTTCTCTGACCTGCGATGGGCTGGTGGGAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614360.1
ENST00000672872.1
CDS CCA 90 bp GCATCCCGAGGGAGCGAACCGCGTTTCTGCATCAGGTTCACATCGTaGCAGGTGGTTTCTGGGTTTCTGTCTGTTGTCTCTGCTCGGAGC +
Preference number: 5 (lower is better)
Translates to: ASRGSEPRFCIRFTS*QVVSGFLSVVSARS
Trigger: GCTCCGAGCAGAGACAACAGACAGAAACCCAGAAACCACCTGCCACGATGTGAACCTGATGCAGAAACGCGGTTCGCTCCCTCGGGATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397325.6
ENST00000538356.1
ENST00000671997.1
ENST00000672682.1
CDS CCA 90 bp AATGAAGCAATACAAAGCCTGTGCCCAACGCTCAGTCTAGGAAAGTaGGTGATCACCCCGGCGTCCACCCTCCCTCCACTTCGCAGGCTG +
Preference number: 5 (lower is better)
Translates to: NEAIQSLCPTLSLGK*VITPASTLPPLRRL
Trigger: CAGCCTGCGAAGTGGAGGGAGGGTGGACGCCGGGGTGATCACCCACTTTCCTAGACTGAGCGTTGGGCACAGGCTTTGTATTGCTTCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614360.1
ENST00000672872.1
CDS-3UTR CAA 90 bp AGAGCCGCCTGTCCTAGGAGAAGCTGTACTCCAGATGCAGTGGGTGACACCCTGGTGCTGTACTTGATGTaGTCGATGGCTGGCAGCACG +
Preference number: 5 (lower is better)
Translates to: RAACPRRSCTPDAVGDTLVLYLM*SMAGST
Trigger: CGTGCTGCCAGCCATCGACAACATCAAGTACAGCAC...CAGGGTGTCACCCACTGCATCTGGAGTACAGCTTCTCCTAGGACAGGCGGCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328957.13
ENST00000672944.1
CDS-3UTR CAA 90 bp ACCACAAGGAGCTGCATTATGATGTGTGACTTAGGTCTTGGTTGGAGGGCTGAGCCCACAGCCGCTGTGTaGGCCGCGCCACATCCTCAC +
Preference number: 5 (lower is better)
Translates to: TTRSCIMMCDLGLGWRAEPTAAV*AAPHPH
Trigger: GTGAGGATGTGGCGCGGCCAACACAGCGGCTGTGGG...CTCAGCCCTCCAACCAAGACCTAAGTCACACATCATAATGCAGCTCCTTGTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CAA 90 bp AAGCAGTCGTGCCAGCCTCCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCAGCCGGAGCCCAAAGTaGGCATCTTTGGACATCTCC +
Preference number: 5 (lower is better)
Translates to: KQSCQPPRHGLRFVAVHVSRSPK*ASLDIS
Trigger: GGAGATGTCCAAAGATGCCAACTTTGGGCTCCGGCT...GACATGGACAGCGACAAACCTGAGGCCGTGTCTAGGAGGCTGGCACGACTGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CAA 90 bp AGAAGCTGTACTCCAGATGCAGTGGGTGACACCCTGGTCACTCAGCCACACCCCAGCCGGAGCCCAAAGTaGGCATCTTTGGACATCTCC +
Preference number: 5 (lower is better)
Translates to: RSCTPDAVGDTLVTQPHPSRSPK*ASLDIS
Trigger: GGAGATGTCCAAAGATGCCAACTTTGGGCTCCGGCT...GGGGTGTGGCTGAGTGACCAGGGTGTCACCCACTGCATCTGGAGTACAGCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CAA 90 bp CAGCCTCCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCCTCCAGCACCCCCAGTGCCGTGCGTGTTaGATCCAGTTTCTGATCATC +
Preference number: 5 (lower is better)
Translates to: QPPRHGLRFVAVHVLQHPQCRAC*IQFLII
Trigger: GATGATCAGAAACTGGATCAAACACGCACGGCACTG...GGGGTGCTGGAGGACATGGACAGCGACAAACCTGAGGCCGTGTCTAGGAGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CAA 90 bp AGAGCCGCCTGTCCTAGGAGAAGCTGTACTCCAGATGCAGTGGGTGACACCCTGAGGCACGTGTTTGAGTaGGCATCACTGTCCCCAGAC +
Preference number: 5 (lower is better)
Translates to: RAACPRRSCTPDAVGDTLRHVFE*ASLSPD
Trigger: GTCTGGGGACAGTGATGCCAACTCAAACACGTGCCT...CAGGGTGTCACCCACTGCATCTGGAGTACAGCTTCTCCTAGGACAGGCGGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CAA 90 bp CCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCCTCCAGCACCCCTCTTACAGGCACGTGTTTGAGTaGGCATCACTGTCCCCAGAC +
Preference number: 5 (lower is better)
Translates to: PRHGLRFVAVHVLQHPSYRHVFE*ASLSPD
Trigger: GTCTGGGGACAGTGATGCCAACTCAAACACGTGCCT...GTAAGAGGGGTGCTGGAGGACATGGACAGCGACAAACCTGAGGCCGTGTCTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CAA 90 bp CGGGTAGAGCCGCCTGTCCTAGGAGAAGCTGTACTCCAGATGCAGTGGGTGACAGGAGAAGGCACGTGTTaGAGTTGGCATCACTGTCCC +
Preference number: 5 (lower is better)
Translates to: RVEPPVLGEAVLQMQWVTGEGTC*SWHHCP
Trigger: GGGACAGTGATGCCAACTCAAACACGTGCCTTCTCC...TGTCACCCACTGCATCTGGAGTACAGCTTCTCCTAGGACAGGCGGCTCTACCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS CCA 90 bp GCATCCCGAGGGAGCGAACCGCGTTTCTGCATCAGGTTCACATCGTaGCAGGTGGTTTCTGGGTTTCTGTCTGTTGTCTCTGCTGTGGGA +
Preference number: 5 (lower is better)
Translates to: ASRGSEPRFCIRFTS*QVVSGFLSVVSAVG
Trigger: TCCCACAGCAGAGACAACAGACAGAAACCCAGAAACCACCTGCCACGATGTGAACCTGATGCAGAAACGCGGTTCGCTCCCTCGGGATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000541995.5
ENST00000542942.1
ENST00000672032.1
ENST00000673376.1
CDS-3UTR CAA 90 bp CCTGGCCAGGAGATACCGTGGAGAAGGCACGTGTTTGAGTTGGCATCACTGTCCCCTGGGTACCGCTTGTaGACGTACTGGTCCAGATTG +
Preference number: 5 (lower is better)
Translates to: PGQEIPWRRHVFELASLSPGYRL*TYWSRL
Trigger: CAATCTGGACCAGTACGTCAACAAGCGGTACCCAGG...GGACAGTGATGCCAACTCAAACACGTGCCTTCTCCACGGTATCTCCTGGCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328957.13
ENST00000672944.1
CDS-3UTR CAA 90 bp AGAAGCTGTACTCCAGATGCAGTGGGTGACACCCTGGTCACTCAGCCACACCCCTTCTCCAGGTACCACTaGAAGCTGCGACACTTCAGC +
Preference number: 5 (lower is better)
Translates to: RSCTPDAVGDTLVTQPHPFSRYH*KLRHFS
Trigger: GCTGAAGTGTCGCAGCTTCAAGTGGTACCTGGAGAA...GGGGTGTGGCTGAGTGACCAGGGTGTCACCCACTGCATCTGGAGTACAGCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CAA 90 bp AGAGCCGCCTGTCCTAGGAGAAGCTGTACTCCAGATGCAGTGGGTGACACCCTGCCAAAGTTGGCATCTTaGGACATCTCCACCTCCAGG +
Preference number: 5 (lower is better)
Translates to: RAACPRRSCTPDAVGDTLPKLAS*DISTSR
Trigger: CCTGGAGGTGGAGATGTCCAAAGATGCCAACTTTGG...CAGGGTGTCACCCACTGCATCTGGAGTACAGCTTCTCCTAGGACAGGCGGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CAA 90 bp CGGGTAGAGCCGCCTGTCCTAGGAGAAGCTGTACTCCAGATGCAGTGGGTGACACCAAAGTTGGCATCTTaGGACATCTCCACCTCCAGG +
Preference number: 5 (lower is better)
Translates to: RVEPPVLGEAVLQMQWVTPKLAS*DISTSR
Trigger: CCTGGAGGTGGAGATGTCCAAAGATGCCAACTTTGG...TGTCACCCACTGCATCTGGAGTACAGCTTCTCCTAGGACAGGCGGCTCTACCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CAA 90 bp ACTGTATTTATTAAAACAGGCAAGGGGCTGGGCTGCGGCAGGGCCCAGGTGCCTAGCCGGAGCCCAAAGTaGGCATCTTTGGACATCTCC +
Preference number: 5 (lower is better)
Translates to: TVFIKTGKGLGCGRAQVPSRSPK*ASLDIS
Trigger: GGAGATGTCCAAAGATGCCAACTTTGGGCTCCGGCT...AGGCACCTGGGCCCTGCCGCAGCCCAGCCCCTTGCCTGTTTTAATAAATACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000671997.1
ENST00000672944.1
CDS-3UTR CAA 90 bp AGGAAGACACACACAGTGCTGCTGCCTAATCCTCTCTTTATTTGGTCTCTGCTGTGCATGGTCCGGGGCTaGGCCTCCCTATGGGGCGTG +
Preference number: 5 (lower is better)
Translates to: RKTHTVLLPNPLFIWSLLCMVRG*ASLWGV
Trigger: CACGCCCCATAGGGAGGCCAAGCCCCGGACCATGCA...CAGCAGAGACCAAATAAAGAGAGGATTAGGCAGCAGCACTGTGTGTGTCTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000671997.1
ENST00000672944.1
CDS TCA 90 bp TGTGAGCACTGTGGTCATTCTCGCTGCCAGGCTGTGTCTGTTCTATaGAATCACAGTTCCACTCTGCTGGTGGGGGCAGCAGTGGCTTCC +
Preference number: 5 (lower is better)
Translates to: CEHCGHSRCQAVSVL*NHSSTLLVGAAVAS
Trigger: GGAAGCCACTGCTGCCCCCACCAGCAGAGTGGAACTGTGATTTCATAGAACAGACACAGCCTGGCAGCGAGAATGACCACAGTGCTCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000614360.1
ENST00000672872.1
CDS GCA 90 bp AGGCTGAAGTTGGCCTTTGCATCCCGAGGGAGCGAACCGCGTTTCTaGATCAGGTTCACATCGTGGCAGGTGGTTTCTGGGTTTCTGTCT +
Preference number: 5 (lower is better)
Translates to: RLKLAFASRGSEPRF*IRFTSWQVVSGFLS
Trigger: AGACAGAAACCCAGAAACCACCTGCCACGATGTGAACCTGATGCAGAAACGCGGTTCGCTCCCTCGGGATGCAAAGGCCAACTTCAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000397325.6
ENST00000538356.1
ENST00000541995.5
ENST00000542942.1
ENST00000671997.1
ENST00000672032.1
ENST00000672682.1
ENST00000673376.1
CDS CCA 90 bp GATCAGTCCTTCCCGCCGGCTGTTGCGGACAATCTTCACGAGGCCTaGGTACCGCTTGTTGACGTACTGGTCCAGATTGAACTTGAGTTC +
Preference number: 5 (lower is better)
Translates to: DQSFPPAVADNLHEA*VPLVDVLVQIELEF
Trigger: GAACTCAAGTTCAATCTGGACCAGTACGTCAACAAGCGGTACCCAGGCCTCGTGAAGATTGTCCGCAACAGCCGGCGGGAAGGACTGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000424720.6
ENST00000535208.1
ENST00000671851.1
ENST00000672944.1
ENST00000673497.1
CDS CCA 90 bp GAGGGAGCGAACCGCGTTTCTGCATCAGGTTCACATCGTGGCAGGTaGTTTCTGGGTTTCTGTCTGTTGTCTCTGCTGTGGGACAACCTG +
Preference number: 5 (lower is better)
Translates to: EGANRVSASGSHRGR*FLGFCLLSLLWDNL
Trigger: CAGGTTGTCCCACAGCAGAGACAACAGACAGAAACCCAGAAACCACCTGCCACGATGTGAACCTGATGCAGAAACGCGGTTCGCTCCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000541995.5
ENST00000542942.1
ENST00000672032.1
ENST00000673376.1
CDS-3UTR CAA 90 bp CCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCCTCCAGCACCCCTCTTACAACTTGAGTTCCACGTaGTCACTGTTGTCGTCCACC +
Preference number: 5 (lower is better)
Translates to: PRHGLRFVAVHVLQHPSYNLSST*SLLSST
Trigger: GGTGGACGACAACAGTGACAACGTGGAACTCAAGTT...GTAAGAGGGGTGCTGGAGGACATGGACAGCGACAAACCTGAGGCCGTGTCTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328957.13
ENST00000672944.1
CDS-3UTR CAA 90 bp CCAGGAAGACACACACAGTGCTGCTGCCTAATCCTCTCTTTATTTGGTCTCTGCTCGGCCCAGCCCGTGTaGAACTCGACGTGGGCATCA +
Preference number: 5 (lower is better)
Translates to: PGRHTQCCCLILSLFGLCSAQPV*NSTWAS
Trigger: TGATGCCCACGTCGAGTTCAACACGGGCTGGGCCGA...GCAGAGACCAAATAAAGAGAGGATTAGGCAGCAGCACTGTGTGTGTCTTCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328957.13
ENST00000672944.1
CDS-3UTR CAA 90 bp CCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCCTCCAGCACCCCTCTTACATGTACACGTGGGACTaGAAGTCATCCATCCACACC +
Preference number: 5 (lower is better)
Translates to: PRHGLRFVAVHVLQHPSYMYTWD*KSSIHT
Trigger: GGTGTGGATGGATGACTTCAAGTCCCACGTGTACAT...GTAAGAGGGGTGCTGGAGGACATGGACAGCGACAAACCTGAGGCCGTGTCTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CAA 90 bp CGGGTAGAGCCGCCTGTCCTAGGAGAAGCTGTACTCCAGATGCAGTGGGTGACAATGTACACGTGGGACTaGAAGTCATCCATCCACACC +
Preference number: 5 (lower is better)
Translates to: RVEPPVLGEAVLQMQWVTMYTWD*KSSIHT
Trigger: GGTGTGGATGGATGACTTCAAGTCCCACGTGTACAT...TGTCACCCACTGCATCTGGAGTACAGCTTCTCCTAGGACAGGCGGCTCTACCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CAA 90 bp AAGCAGTCGTGCCAGCCTCCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCATGTACACGTGGGACTaGAAGTCATCCATCCACACC +
Preference number: 5 (lower is better)
Translates to: KQSCQPPRHGLRFVAVHVMYTWD*KSSIHT
Trigger: GGTGTGGATGGATGACTTCAAGTCCCACGTGTACAT...GACATGGACAGCGACAAACCTGAGGCCGTGTCTAGGAGGCTGGCACGACTGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CAA 90 bp AGAGCCGCCTGTCCTAGGAGAAGCTGTACTCCAGATGCAGTGGGTGACACCCTGCAGTGCCGTGCGTGTTaGATCCAGTTTCTGATCATC +
Preference number: 5 (lower is better)
Translates to: RAACPRRSCTPDAVGDTLQCRAC*IQFLII
Trigger: GATGATCAGAAACTGGATCAAACACGCACGGCACTG...CAGGGTGTCACCCACTGCATCTGGAGTACAGCTTCTCCTAGGACAGGCGGCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CAA 90 bp AGAAGCTGTACTCCAGATGCAGTGGGTGACACCCTGGTCACTCAGCCACACCCCCAGTGCCGTGCGTGTTaGATCCAGTTTCTGATCATC +
Preference number: 5 (lower is better)
Translates to: RSCTPDAVGDTLVTQPHPQCRAC*IQFLII
Trigger: GATGATCAGAAACTGGATCAAACACGCACGGCACTG...GGGGTGTGGCTGAGTGACCAGGGTGTCACCCACTGCATCTGGAGTACAGCTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CAA 90 bp CGGGTAGAGCCGCCTGTCCTAGGAGAAGCTGTACTCCAGATGCAGTGGGTGACACAGTGCCGTGCGTGTTaGATCCAGTTTCTGATCATC +
Preference number: 5 (lower is better)
Translates to: RVEPPVLGEAVLQMQWVTQCRAC*IQFLII
Trigger: GATGATCAGAAACTGGATCAAACACGCACGGCACTG...TGTCACCCACTGCATCTGGAGTACAGCTTCTCCTAGGACAGGCGGCTCTACCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS GCA 90 bp CTCGCTGCCAGGCTGTGTCTGTTCTATGAAATCACAGTTCCACTCTaGTGGTGGGGGCAGCAGTGGCTTCCGGACTCTCCTTCTTTCTTT +
Preference number: 5 (lower is better)
Translates to: LAARLCLFYEITVPL*WWGQQWLPDSPSFF
Trigger: AAAGAAAGAAGGAGAGTCCGGAAGCCACTGCTGCCCCCACCAGCAGAGTGGAACTGTGATTTCATAGAACAGACACAGCCTGGCAGCGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000614360.1
ENST00000672872.1
CDS-3UTR CAA 90 bp GTCCTCCAGCACCCCTCTTACCAGACCACAAGGAGCTGCATTATGATGTGTGACTCCACGTTGTCACTGTaGTCGTCCACCAGGATGACC +
Preference number: 5 (lower is better)
Translates to: VLQHPSYQTTRSCIMMCDSTLSL*SSTRMT
Trigger: GGTCATCCTGGTGGACGACAACAGTGACAACGTGGA...GTCACACATCATAATGCAGCTCCTTGTGGTCTGGTAAGAGGGGTGCTGGAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328957.13
ENST00000672944.1
CDS-3UTR CAA 90 bp AGAGCCGCCTGTCCTAGGAGAAGCTGTACTCCAGATGCAGTGGGTGACACCCTGACGTACTGGTCCAGATaGAACTTGAGTTCCACGTTG +
Preference number: 5 (lower is better)
Translates to: RAACPRRSCTPDAVGDTLTYWSR*NLSSTL
Trigger: CAACGTGGAACTCAAGTTCAATCTGGACCAGTACGT...CAGGGTGTCACCCACTGCATCTGGAGTACAGCTTCTCCTAGGACAGGCGGCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328957.13
ENST00000672944.1
CDS-3UTR CAA 90 bp ACTGTATTTATTAAAACAGGCAAGGGGCTGGGCTGCGGCAGGGCCCAGGTGCCTTCAAACGTGCTGTACTaGATGTTGTCGATGGCTGGC +
Preference number: 5 (lower is better)
Translates to: TVFIKTGKGLGCGRAQVPSNVLY*MLSMAG
Trigger: GCCAGCCATCGACAACATCAAGTACAGCACGTTTGA...AGGCACCTGGGCCCTGCCGCAGCCCAGCCCCTTGCCTGTTTTAATAAATACAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328957.13
ENST00000672944.1
CDS-3UTR CAA 90 bp AAACTGTATTTATTAAAACAGGCAAGGGGCTGGGCTGCGGCAGGGCCCAGGTGCCCAAAGTTGGCATCTTaGGACATCTCCACCTCCAGG +
Preference number: 5 (lower is better)
Translates to: KLYLLKQARGWAAAGPRCPKLAS*DISTSR
Trigger: CCTGGAGGTGGAGATGTCCAAAGATGCCAACTTTGG...GCACCTGGGCCCTGCCGCAGCCCAGCCCCTTGCCTGTTTTAATAAATACAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000671997.1
ENST00000672944.1
CDS-3UTR CAA 90 bp CCAGGAAGACACACACAGTGCTGCTGCCTAATCCTCTCTTTATTTGGTCTCTGCGACACGGCCTCAGGTTaGTCGCTGTCCATGTCCTCC +
Preference number: 5 (lower is better)
Translates to: PGRHTQCCCLILSLFGLCDTASG*SLSMSS
Trigger: GGAGGACATGGACAGCGACAAACCTGAGGCCGTGTC...GCAGAGACCAAATAAAGAGAGGATTAGGCAGCAGCACTGTGTGTGTCTTCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000671997.1
ENST00000672944.1
CDS-3UTR CAA 90 bp ACCACAAGGAGCTGCATTATGATGTGTGACTTAGGTCTTGGTTGGAGGGCTGAGGACACGGCCTCAGGTTaGTCGCTGTCCATGTCCTCC +
Preference number: 5 (lower is better)
Translates to: TTRSCIMMCDLGLGWRAEDTASG*SLSMSS
Trigger: GGAGGACATGGACAGCGACAAACCTGAGGCCGTGTC...CTCAGCCCTCCAACCAAGACCTAAGTCACACATCATAATGCAGCTCCTTGTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS TCA 90 bp AAACAAATGCAAACCGTTCAGCAGTGGCCCCCGAATAACTCAGCCTaGGTGGAACCCGAGGGTTCTTTGCAGGACTTAAGTGGCGCCGTT +
Preference number: 5 (lower is better)
Translates to: KQMQTVQQWPPNNSA*VEPEGSLQDLSGAV
Trigger: AACGGCGCCACTTAAGTCCTGCAAAGAACCCTCGGGTTCCACTCAGGCTGAGTTATTCGGGGGCCACTGCTGAACGGTTTGCATTTGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000614360.1
ENST00000672872.1
CDS CCA 90 bp GCTGCCAGGCTGTGTCTGTTCTATGAAATCACAGTTCCACTCTGCTaGTGGGGGCAGCAGTGGCTTCCGGACTCTCCTTCTTTCTTTCTT +
Preference number: 5 (lower is better)
Translates to: AARLCLFYEITVPLC*WGQQWLPDSPSFFL
Trigger: AAGAAAGAAAGAAGGAGAGTCCGGAAGCCACTGCTGCCCCCACCAGCAGAGTGGAACTGTGATTTCATAGAACAGACACAGCCTGGCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000614360.1
ENST00000672872.1
CDS-3UTR CAA 90 bp AAACTGTATTTATTAAAACAGGCAAGGGGCTGGGCTGCGGCAGGGCCCAGGTGCAACTTGAGTTCCACGTaGTCACTGTTGTCGTCCACC +
Preference number: 5 (lower is better)
Translates to: KLYLLKQARGWAAAGPRCNLSST*SLLSST
Trigger: GGTGGACGACAACAGTGACAACGTGGAACTCAAGTT...GCACCTGGGCCCTGCCGCAGCCCAGCCCCTTGCCTGTTTTAATAAATACAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328957.13
ENST00000672944.1
CDS-3UTR CAA 90 bp ACTGTATTTATTAAAACAGGCAAGGGGCTGGGCTGCGGCAGGGCCCAGGTGCCTTGGTCCAGATTGAACTaGAGTTCCACGTTGTCACTG +
Preference number: 5 (lower is better)
Translates to: TVFIKTGKGLGCGRAQVPWSRLN*SSTLSL
Trigger: CAGTGACAACGTGGAACTCAAGTTCAATCTGGACCA...AGGCACCTGGGCCCTGCCGCAGCCCAGCCCCTTGCCTGTTTTAATAAATACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328957.13
ENST00000672944.1
CDS-3UTR CAA 90 bp CCAGGAAGACACACACAGTGCTGCTGCCTAATCCTCTCTTTATTTGGTCTCTGCAGGCCTGGGTACCGCTaGTTGACGTACTGGTCCAGA +
Preference number: 5 (lower is better)
Translates to: PGRHTQCCCLILSLFGLCRPGYR*LTYWSR
Trigger: TCTGGACCAGTACGTCAACAAGCGGTACCCAGGCCT...GCAGAGACCAAATAAAGAGAGGATTAGGCAGCAGCACTGTGTGTGTCTTCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328957.13
ENST00000672944.1
CDS-3UTR CAA 90 bp GTCCTCCAGCACCCCTCTTACCAGACCACAAGGAGCTGCATTATGATGTGTGACTTCTCCAGGTACCACTaGAAGCTGCGACACTTCAGC +
Preference number: 5 (lower is better)
Translates to: VLQHPSYQTTRSCIMMCDFSRYH*KLRHFS
Trigger: GCTGAAGTGTCGCAGCTTCAAGTGGTACCTGGAGAA...GTCACACATCATAATGCAGCTCCTTGTGGTCTGGTAAGAGGGGTGCTGGAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CAA 90 bp CCTCAGCCTCTGCTGTCCTGGCCGCACATAGAGCCCTGTCCTGCTGTGTCTGCCATAATTTACCTTATCTaGCTGGAACCCTTCTGTTTC +
Preference number: 5 (lower is better)
Translates to: PQPLLSWPHIEPCPAVSAIIYLI*LEPFCF
Trigger: GAAACAGAAGGGTTCCAGCAAGATAAGGTAAATTAT...GGCAGACACAGCAGGACAGGGCTCTATGTGCGGCCAGGACAGCAGAGGCTGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411988.6
ENST00000672816.1
CDS TCA 90 bp AATTCAACCCTGTCAAGCTTGGAGGCCTTCGGCGCATTTAGCCGTTaGAGGAAGTACCCACCGTGGTGTGCTCCAACCAGCATTTTCACA +
Preference number: 5 (lower is better)
Translates to: NSTLSSLEAFGAFSR*RKYPPWCAPTSIFT
Trigger: TGTGAAAATGCTGGTTGGAGCACACCACGGTGGGTACTTCCTTCAACGGCTAAATGCGCCGAAGGCCTCCAAGCTTGACAGGGTTGAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614360.1
ENST00000672872.1
CDS CCA 90 bp TTGCGGACAATCTTCACGAGGCCTGGGTACCGCTTGTTGACGTACTaGTCCAGATTGAACTTGAGTTCCACGTTGTCACTGTTGTCGTCC +
Preference number: 5 (lower is better)
Translates to: LRTIFTRPGYRLLTY*SRLNLSSTLSLLSS
Trigger: GGACGACAACAGTGACAACGTGGAACTCAAGTTCAATCTGGACCAGTACGTCAACAAGCGGTACCCAGGCCTCGTGAAGATTGTCCGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000424720.6
ENST00000535208.1
ENST00000671851.1
ENST00000672944.1
ENST00000673497.1
CDS CCA 90 bp GCCAGGCTGTGTCTGTTCTATGAAATCACAGTTCCACTCTGCTGGTaGGGGCAGCAGTGGCTTCCGGACTCTCCTTCTTTCTTTCTTCTT +
Preference number: 5 (lower is better)
Translates to: ARLCLFYEITVPLCW*GQQWLPDSPSFFLL
Trigger: AAGAAGAAAGAAAGAAGGAGAGTCCGGAAGCCACTGCTGCCCCCACCAGCAGAGTGGAACTGTGATTTCATAGAACAGACACAGCCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614360.1
ENST00000672872.1
CDS-3UTR CAA 90 bp AGGAAGACACACACAGTGCTGCTGCCTAATCCTCTCTTTATTTGGTCTCTGCTGCTGGGTTTCTGTCTGTaGTCTCTGCTCGGAGCCCTG +
Preference number: 5 (lower is better)
Translates to: RKTHTVLLPNPLFIWSLLLGFCL*SLLGAL
Trigger: CAGGGCTCCGAGCAGAGACAACAGACAGAAACCCAG...CAGCAGAGACCAAATAAAGAGAGGATTAGGCAGCAGCACTGTGTGTGTCTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397325.6
ENST00000671997.1
CDS-3UTR CAA 90 bp AGGAAGACACACACAGTGCTGCTGCCTAATCCTCTCTTTATTTGGTCTCTGCTGTCCACGTTGTCACTGTaGTCGTCCACCAGGATGACC +
Preference number: 5 (lower is better)
Translates to: RKTHTVLLPNPLFIWSLLSTLSL*SSTRMT
Trigger: GGTCATCCTGGTGGACGACAACAGTGACAACGTGGA...CAGCAGAGACCAAATAAAGAGAGGATTAGGCAGCAGCACTGTGTGTGTCTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328957.13
ENST00000672944.1
CDS-3UTR CAA 90 bp ACCACAAGGAGCTGCATTATGATGTGTGACTTAGGTCTTGGTTGGAGGGCTGAGTCATCCACCAGACACTaGGAGTCAGGCAAGAAGGCT +
Preference number: 5 (lower is better)
Translates to: TTRSCIMMCDLGLGWRAESSTRH*ESGKKA
Trigger: AGCCTTCTTGCCTGACTCCAAGTGTCTGGTGGATGA...CTCAGCCCTCCAACCAAGACCTAAGTCACACATCATAATGCAGCTCCTTGTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CAA 90 bp ACCACAAGGAGCTGCATTATGATGTGTGACTTAGGTCTTGGTTGGAGGGCTGAGCCAAAGTTGGCATCTTaGGACATCTCCACCTCCAGG +
Preference number: 5 (lower is better)
Translates to: TTRSCIMMCDLGLGWRAEPKLAS*DISTSR
Trigger: CCTGGAGGTGGAGATGTCCAAAGATGCCAACTTTGG...CTCAGCCCTCCAACCAAGACCTAAGTCACACATCATAATGCAGCTCCTTGTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CAA 90 bp AGGAAGACACACACAGTGCTGCTGCCTAATCCTCTCTTTATTTGGTCTCTGCTGAGCCGGAGCCCAAAGTaGGCATCTTTGGACATCTCC +
Preference number: 5 (lower is better)
Translates to: RKTHTVLLPNPLFIWSLLSRSPK*ASLDIS
Trigger: GGAGATGTCCAAAGATGCCAACTTTGGGCTCCGGCT...CAGCAGAGACCAAATAAAGAGAGGATTAGGCAGCAGCACTGTGTGTGTCTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000671997.1
ENST00000672944.1
CDS-3UTR CAA 90 bp AGGAAGACACACACAGTGCTGCTGCCTAATCCTCTCTTTATTTGGTCTCTGCTGAGGCACGTGTTTGAGTaGGCATCACTGTCCCCAGAC +
Preference number: 5 (lower is better)
Translates to: RKTHTVLLPNPLFIWSLLRHVFE*ASLSPD
Trigger: GTCTGGGGACAGTGATGCCAACTCAAACACGTGCCT...CAGCAGAGACCAAATAAAGAGAGGATTAGGCAGCAGCACTGTGTGTGTCTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000671997.1
ENST00000672944.1
CDS-3UTR CAA 90 bp ACCACAAGGAGCTGCATTATGATGTGTGACTTAGGTCTTGGTTGGAGGGCTGAGCAGTGCCGTGCGTGTTaGATCCAGTTTCTGATCATC +
Preference number: 5 (lower is better)
Translates to: TTRSCIMMCDLGLGWRAEQCRAC*IQFLII
Trigger: GATGATCAGAAACTGGATCAAACACGCACGGCACTG...CTCAGCCCTCCAACCAAGACCTAAGTCACACATCATAATGCAGCTCCTTGTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
CDS-3UTR CAA 90 bp CCTAGACACGGCCTCAGGTTTGTCGCTGTCCATGTCCTCCAGCACCCCTCTTACATAATTTACCTTATCTaGCTGGAACCCTTCTGTTTC +
Preference number: 5 (lower is better)
Translates to: PRHGLRFVAVHVLQHPSYIIYLI*LEPFCF
Trigger: GAAACAGAAGGGTTCCAGCAAGATAAGGTAAATTAT...GTAAGAGGGGTGCTGGAGGACATGGACAGCGACAAACCTGAGGCCGTGTCTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411988.6
ENST00000672816.1
CDS GCA 90 bp AAACATACATCAAATATGACGATGAATGAAGCAATACAAAGCCTGTaGCCAACGCTCAGTCTAGGAAAGTGGGTGATCACCCCGGCGTCC +
Preference number: 5 (lower is better)
Translates to: KHTSNMTMNEAIQSL*PTLSLGKWVITPAS
Trigger: GGACGCCGGGGTGATCACCCACTTTCCTAGACTGAGCGTTGGGCACAGGCTTTGTATTGCTTCATTCATCGTCATATTTGATGTATGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614360.1
ENST00000672872.1
CDS GCA 72 bp CGTGTCGGCTGCGCACCCGGCGGTCGCCGCTCACGATaGGCACGAGCTCCTGGGAGCGGCCCTGCAGGCGGC +
Preference number: 6 (lower is better)
Translates to: RVGCAPGGRRSR*ARAPGSGPAGG
Trigger: GCCGCCTGCAGGGCCGCTCCCAGGAGCTCGTGCGCATCGTGAGCGGCGACCGCCGGGTGCGCAGCCGACACG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000424720.6
ENST00000672944.1
ENST00000673497.1
CDS GCA 72 bp CACGGTCCCCCAGCGTGCCCACCTTGGCGTGTCGGCTaGGCACCCGGCGGTCGCCGCTCACGATGCGCACGA +
Preference number: 6 (lower is better)
Translates to: HGPPACPPWRVG*APGGRRSRCAR
Trigger: TCGTGCGCATCGTGAGCGGCGACCGCCGGGTGCGCAGCCGACACGCCAAGGTGGGCACGCTGGGGGACCGTG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000424720.6
ENST00000672944.1
ENST00000673497.1
CDS CCA 72 bp GCAGGATGGCCTCACGGTCCCCCAGCGTGCCCACCTTaGCGTGTCGGCTGCGCACCCGGCGGTCGCCGCTCA +
Preference number: 6 (lower is better)
Translates to: AGWPHGPPACPP*RVGCAPGGRRS
Trigger: TGAGCGGCGACCGCCGGGTGCGCAGCCGACACGCCAAGGTGGGCACGCTGGGGGACCGTGAGGCCATCCTGC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000424720.6
ENST00000672944.1
ENST00000673497.1
CDS CAA 90 bp TCCAGGCGCTGCAGGATGGCCTCACGGTCCCCCAGCGTGCCCACCTaGGCGTGTCGGCTGCGCACCCGGCGGTCGCCGCTCACGATGCGC +
Preference number: 6 (lower is better)
Translates to: SRRCRMASRSPSVPT*ACRLRTRRSPLTMR
Trigger: GCGCATCGTGAGCGGCGACCGCCGGGTGCGCAGCCGACACGCCAAGGTGGGCACGCTGGGGGACCGTGAGGCCATCCTGCAGCGCCTGGA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000424720.6
ENST00000672944.1
ENST00000673497.1
CDS CCA 72 bp CACGTCACCCACAGGGGTCCGGCTCCTTCCCCGGGATaGTGGAGTCCGCGGCGCCGCCGTGCCAGGCTGAAG +
Preference number: 6 (lower is better)
Translates to: HVTHRGPAPSPG*WSPRRRRARLK
Trigger: CTTCAGCCTGGCACGGCGGCGCCGCGGACTCCACCATCCCGGGGAAGGAGCCGGACCCCTGTGGGTGACGTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000538356.1
ENST00000542942.1
ENST00000672032.1
ENST00000672682.1
CDS CCA 72 bp ACCCGGCGGTCGCCGCTCACGATGCGCACGAGCTCCTaGGAGCGGCCCTGCAGGCGGCAGTACACGGAGAAC +
Preference number: 6 (lower is better)
Translates to: TRRSPLTMRTSS*ERPCRRQYTEN
Trigger: GTTCTCCGTGTACTGCCGCCTGCAGGGCCGCTCCCAGGAGCTCGTGCGCATCGTGAGCGGCGACCGCCGGGT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000424720.6
ENST00000672944.1
ENST00000673497.1
CDS CCA 72 bp ACACTGCCACACAGGGGTCCGGCTCCTTCCCCGGGATaGTGGAGTCCGCGGCGCCGCCGTGCCAGGCTGAAG +
Preference number: 6 (lower is better)
Translates to: TLPHRGPAPSPG*WSPRRRRARLK
Trigger: CTTCAGCCTGGCACGGCGGCGCCGCGGACTCCACCATCCCGGGGAAGGAGCCGGACCCCTGTGTGGCAGTGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397325.6
ENST00000541995.5
ENST00000671997.1
ENST00000673376.1
CDS CCA 72 bp ACTCCAGTCGCTGGCAGTGCTGCTGTGGGCCTGGCGTaGCCCCAGGGCTCAGCTGTGGGCTCCGTGCGTGGC +
Preference number: 6 (lower is better)
Translates to: TPVAGSAAVGLA*PQGSAVGSVRG
Trigger: GCCACGCACGGAGCCCACAGCTGAGCCCTGGGGCCACGCCAGGCCCACAGCAGCACTGCCAGCGACTGGAGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411988.6
ENST00000672816.1
CDS TCA 72 bp CGGGATGGTGGAGTCCGCGGCGCCGCCGTGCCAGGCTaGAGTTGGCCTTTGCATCCCGAGGGAGCGAACCGC +
Preference number: 6 (lower is better)
Translates to: RDGGVRGAAVPG*SWPLHPEGANR
Trigger: GCGGTTCGCTCCCTCGGGATGCAAAGGCCAACTTCAGCCTGGCACGGCGGCGCCGCGGACTCCACCATCCCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000397325.6
ENST00000538356.1
ENST00000541995.5
ENST00000542942.1
ENST00000671997.1
ENST00000672032.1
ENST00000672682.1
ENST00000673376.1
CDS GCA 72 bp GCCGCCACACTGCCACACTCCAGTCGCTGGCAGTGCTaGTGTGGGCCTGGCGTGGCCCCAGGGCTCAGCTGT +
Preference number: 6 (lower is better)
Translates to: AATLPHSSRWQC*CGPGVAPGLSC
Trigger: ACAGCTGAGCCCTGGGGCCACGCCAGGCCCACAGCAGCACTGCCAGCGACTGGAGTGTGGCAGTGTGGCGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411988.6
ENST00000672816.1
CDS GCA 72 bp TGGCCAGCCCCTTCTCACCTCCCTGGGCACTGCGGCTaGACCCCCAGGCCTGGCAAGGTCACGGTGACCTCC +
Preference number: 6 (lower is better)
Translates to: WPAPSHLPGHCG*TPRPGKVTVTS
Trigger: GGAGGTCACCGTGACCTTGCCAGGCCTGGGGGTGCAGCCGCAGTGCCCAGGGAGGTGAGAAGGGGCTGGCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000614360.1
ENST00000672872.1
CDS TCA 72 bp CCGTCAGCAAAGTTCGGATCTTCCTGGCCACCGCCATaGACACGGCTGCAGCGGGGGCCTCACCCGCGGGGC +
Preference number: 6 (lower is better)
Translates to: PSAKFGSSWPPP*TRLQRGPHPRG
Trigger: GCCCCGCGGGTGAGGCCCCCGCTGCAGCCGTGTTCATGGCGGTGGCCAGGAAGATCCGAACTTTGCTGACGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000424720.6
ENST00000672944.1
ENST00000673497.1
CDS GCA 72 bp CCGCTCACGATGCGCACGAGCTCCTGGGAGCGGCCCTaGAGGCGGCAGTACACGGAGAACAGGACGATGCCC +
Preference number: 6 (lower is better)
Translates to: PLTMRTSSWERP*RRQYTENRTMP
Trigger: GGGCATCGTCCTGTTCTCCGTGTACTGCCGCCTGCAGGGCCGCTCCCAGGAGCTCGTGCGCATCGTGAGCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000424720.6
ENST00000672944.1
ENST00000673497.1
CDS GCA 72 bp CACGATGCGACGCCGGTCCTCTCGGATCCGCGACAGTaGGGGCTCGGCCCAGCCCGTGTTGAACTCGACGTG +
Preference number: 6 (lower is better)
Translates to: HDATPVLSDPRQ*GLGPARVELDV
Trigger: CACGTCGAGTTCAACACGGGCTGGGCCGAGCCCGCACTGTCGCGGATCCGAGAGGACCGGCGTCGCATCGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000424720.6
ENST00000672944.1
ENST00000673497.1
CDS GCA 72 bp TCCTTCCCCGGGATGGTGGAGTCCGCGGCGCCGCCGTaGCAGGCTGAAGTTGGCCTTTGCATCCCGAGGGAG +
Preference number: 6 (lower is better)
Translates to: SFPGMVESAAPP*QAEVGLCIPRE
Trigger: CTCCCTCGGGATGCAAAGGCCAACTTCAGCCTGGCACGGCGGCGCCGCGGACTCCACCATCCCGGGGAAGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000397325.6
ENST00000538356.1
ENST00000541995.5
ENST00000542942.1
ENST00000671997.1
ENST00000672032.1
ENST00000672682.1
ENST00000673376.1
CDS GCA 72 bp TCACCCCGGCGTCCACCCTCCCTCCACTTCGCAGGCTaGCGTCTCTGGACCTCGTGTGCCTTCCCCGTGGCT +
Preference number: 6 (lower is better)
Translates to: SPRRPPSLHFAG*RLWTSCAFPVA
Trigger: AGCCACGGGGAAGGCACACGAGGTCCAGAGACGGCAGCCTGCGAAGTGGAGGGAGGGTGGACGCCGGGGTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614360.1
ENST00000672872.1
CDS CCA 72 bp TCACCTCCCTGGGCACTGCGGCTGCACCCCCAGGCCTaGCAAGGTCACGGTGACCTCCACACCAGCCCATGC +
Preference number: 6 (lower is better)
Translates to: SPPWALRLHPQA*QGHGDLHTSPC
Trigger: GCATGGGCTGGTGTGGAGGTCACCGTGACCTTGCCAGGCCTGGGGGTGCAGCCGCAGTGCCCAGGGAGGTGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000614360.1
ENST00000672872.1
CDS CCA 72 bp GCCAGGCTGGTCTCGTGTGATGCGCCCGCCTCGGCCTaGGGTTCCTGTTCTTGCTCAGGGCCGCTGCTGCTG +
Preference number: 6 (lower is better)
Translates to: ARLVSCDAPASA*GSCSCSGPLLL
Trigger: CAGCAGCAGCGGCCCTGAGCAAGAACAGGAACCCCAGGCCGAGGCGGGCGCATCACACGAGACCAGCCTGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614360.1
ENST00000672872.1
CDS CAA 90 bp TCCCCGGGATGGTGGAGTCCGCGGCGCCGCCGTGCCAGGCTGAAGTaGGCCTTTGCATCCCGAGGGAGCGAACCGCGTTTCTGCATCAGG +
Preference number: 6 (lower is better)
Translates to: SPGWWSPRRRRARLK*AFASRGSEPRFCIR
Trigger: CCTGATGCAGAAACGCGGTTCGCTCCCTCGGGATGCAAAGGCCAACTTCAGCCTGGCACGGCGGCGCCGCGGACTCCACCATCCCGGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000397325.6
ENST00000538356.1
ENST00000541995.5
ENST00000542942.1
ENST00000671997.1
ENST00000672032.1
ENST00000672682.1
ENST00000673376.1
CDS GCA 72 bp CTGCAGGGGCGGGACAGAGCCTCGTCCTCCATCGTCTaGCCACCCGTCTTCAGAAGCGCCTGGCACACTGGC +
Preference number: 6 (lower is better)
Translates to: LQGRDRASSSIV*PPVFRSAWHTG
Trigger: GCCAGTGTGCCAGGCGCTTCTGAAGACGGGTGGGCAGACGATGGAGGACGAGGCTCTGTCCCGCCCCTGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538356.1
ENST00000672682.1
CDS GCA 72 bp CCTCGGCCTGGGGTTCCTGTTCTTGCTCAGGGCCGCTaGTGCTGGCTGCCTCCTGGTTTCCAGCTGTGCCCG +
Preference number: 6 (lower is better)
Translates to: PRPGVPVLAQGR*CWLPPGFQLCP
Trigger: CGGGCACAGCTGGAAACCAGGAGGCAGCCAGCAGCAGCGGCCCTGAGCAAGAACAGGAACCCCAGGCCGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614360.1
ENST00000672872.1
CDS CCA 72 bp CAGCTGTGCCCGAATCAGCTCGCCCCACTTCAATGGTaGCAAGGTGCCCTTCCTGGGGGCGGGCAGCCCAGG +
Preference number: 6 (lower is better)
Translates to: QLCPNQLAPLQW*QGALPGGGQPR
Trigger: CCTGGGCTGCCCGCCCCCAGGAAGGGCACCTTGCCACCATTGAAGTGGGGCGAGCTGATTCGGGCACAGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000614360.1
ENST00000672872.1
CDS CAA 72 bp TGGTGGAGTCCGCGGCGCCGCCGTGCCAGGCTGAAGTaGGCCTTTGCATCCCGAGGGAGCGAACCGCGTTTC +
Preference number: 6 (lower is better)
Translates to: WWSPRRRRARLK*AFASRGSEPRF
Trigger: GAAACGCGGTTCGCTCCCTCGGGATGCAAAGGCCAACTTCAGCCTGGCACGGCGGCGCCGCGGACTCCACCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000397325.6
ENST00000538356.1
ENST00000541995.5
ENST00000542942.1
ENST00000671997.1
ENST00000672032.1
ENST00000672682.1
ENST00000673376.1
CDS TCA 72 bp ACGCCTTCCCATCCCCAGCCACACCCGGCTCACCTTTaGGCTCGACGCCATGGCCACTGTCTCCCGCACACG +
Preference number: 6 (lower is better)
Translates to: TPSHPQPHPAHL*ARRHGHCLPHT
Trigger: CGTGTGCGGGAGACAGTGGCCATGGCGTCGAGCTCAAAGGTGAGCCGGGTGTGGCTGGGGATGGGAAGGCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614360.1
ENST00000672872.1
CDS GCA 72 bp GCAGCCGCGCGCGGATCAGTCCTTCCCGCCGGCTGTTaGGGACAATCTTCACGAGGCCTGGGTACCGCTTGT +
Preference number: 6 (lower is better)
Translates to: AAARGSVLPAGC*GQSSRGLGTAC
Trigger: ACAAGCGGTACCCAGGCCTCGTGAAGATTGTCCGCAACAGCCGGCGGGAAGGACTGATCCGCGCGCGGCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000424720.6
ENST00000535208.1
ENST00000671851.1
ENST00000672944.1
ENST00000673497.1
CDS GCA 72 bp TCCGCGGCGCCGCCGTGCCAGGCTGAAGTTGGCCTTTaGATCCCGAGGGAGCGAACCGCGTTTCTGCATCAG +
Preference number: 6 (lower is better)
Translates to: SAAPPCQAEVGL*IPRERTAFLHQ
Trigger: CTGATGCAGAAACGCGGTTCGCTCCCTCGGGATGCAAAGGCCAACTTCAGCCTGGCACGGCGGCGCCGCGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000397325.6
ENST00000538356.1
ENST00000541995.5
ENST00000542942.1
ENST00000671997.1
ENST00000672032.1
ENST00000672682.1
ENST00000673376.1
CDS CCA 72 bp TTCCAGCTGTGCCCGAATCAGCTCGCCCCACTTCAATaGTGGCAAGGTGCCCTTCCTGGGGGCGGGCAGCCC +
Preference number: 6 (lower is better)
Translates to: FQLCPNQLAPLQ*WQGALPGGGQP
Trigger: GGGCTGCCCGCCCCCAGGAAGGGCACCTTGCCACCATTGAAGTGGGGCGAGCTGATTCGGGCACAGCTGGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000614360.1
ENST00000672872.1
CDS CAA 72 bp TGCAGCCGCGCGCGGATCAGTCCTTCCCGCCGGCTGTaGCGGACAATCTTCACGAGGCCTGGGTACCGCTTG +
Preference number: 6 (lower is better)
Translates to: CSRARISPSRRL*RTIFTRPGYRL
Trigger: CAAGCGGTACCCAGGCCTCGTGAAGATTGTCCGCAACAGCCGGCGGGAAGGACTGATCCGCGCGCGGCTGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000424720.6
ENST00000535208.1
ENST00000671851.1
ENST00000672944.1
ENST00000673497.1
CDS CAA 72 bp CACGCCTTCCCATCCCCAGCCACACCCGGCTCACCTTaGAGCTCGACGCCATGGCCACTGTCTCCCGCACAC +
Preference number: 6 (lower is better)
Translates to: HAFPSPATPGSP*SSTPWPLSPAH
Trigger: GTGTGCGGGAGACAGTGGCCATGGCGTCGAGCTCAAAGGTGAGCCGGGTGTGGCTGGGGATGGGAAGGCGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614360.1
ENST00000672872.1
CDS CCA 72 bp TGGGCATGCGGCCCGTGCCGTCATCCACCAGACACTTaGAGTCAGGCAAGAAGGCTGTGGAGCCCAGAGGCC +
Preference number: 6 (lower is better)
Translates to: WACGPCRHPPDT*SQARRLWSPEA
Trigger: GGCCTCTGGGCTCCACAGCCTTCTTGCCTGACTCCAAGTGTCTGGTGGATGACGGCACGGGCCGCATGCCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000541995.5
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
ENST00000673376.1
CDS CCA 72 bp GGGGCCACTCTGGGTGAAGTCCCACAGCCGCTGTGTTaGCCGCGCCACATCCTCACACTTCTTCAGGGTGGG +
Preference number: 6 (lower is better)
Translates to: GATLGEVPQPLC*PRHILTLLQGG
Trigger: CCCACCCTGAAGAAGTGTGAGGATGTGGCGCGGCCAACACAGCGGCTGTGGGACTTCACCCAGAGTGGCCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000541995.5
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
ENST00000673376.1
CDS CCA 72 bp CGTCTGCCCACCCGTCTTCAGAAGCGCCTGGCACACTaGCCTCTGGGACGACCTCCAGCAGTTTCAGCCTCC +
Preference number: 6 (lower is better)
Translates to: RLPTRLQKRLAH*PLGRPPAVSAS
Trigger: GGAGGCTGAAACTGCTGGAGGTCGTCCCAGAGGCCAGTGTGCCAGGCGCTTCTGAAGACGGGTGGGCAGACG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538356.1
ENST00000672682.1
CDS CAA 90 bp TTCTTCAGGGTGGGCATGCGGCCCGTGCCGTCATCCACCAGACACTaGGAGTCAGGCAAGAAGGCTGTGGAGCCCAGAGGCCCCAGCTGC +
Preference number: 6 (lower is better)
Translates to: FFRVGMRPVPSSTRH*ESGKKAVEPRGPSC
Trigger: GCAGCTGGGGCCTCTGGGCTCCACAGCCTTCTTGCCTGACTCCAAGTGTCTGGTGGATGACGGCACGGGCCGCATGCCCACCCTGAAGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000541995.5
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
ENST00000673376.1
CDS GCA 72 bp TTGAGGAGCTGGGAGGGCGTGTGGTTGACCACGCTGTaGACGGAGCGCAGGATGACCGACAGCGCCTCATTG +
Preference number: 6 (lower is better)
Translates to: LRSWEGVWLTTL*TERRMTDSASL
Trigger: CAATGAGGCGCTGTCGGTCATCCTGCGCTCCGTGCACAGCGTGGTCAACCACACGCCCTCCCAGCTCCTCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000424720.6
ENST00000535208.1
ENST00000671851.1
ENST00000672944.1
ENST00000673497.1
CDS GCA 72 bp GCCGCGCCACATCCTCACACTTCTTCAGGGTGGGCATaGGGCCCGTGCCGTCATCCACCAGACACTTGGAGT +
Preference number: 6 (lower is better)
Translates to: AAPHPHTSSGWA*GPCRHPPDTWS
Trigger: ACTCCAAGTGTCTGGTGGATGACGGCACGGGCCGCATGCCCACCCTGAAGAAGTGTGAGGATGTGGCGCGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000541995.5
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
ENST00000673376.1
CDS GCA 72 bp GGCCGCTGCTGCTGGCTGCCTCCTGGTTTCCAGCTGTaGCCGAATCAGCTCGCCCCACTTCAATGGTGGCAA +
Preference number: 6 (lower is better)
Translates to: GRCCWLPPGFQL*PNQLAPLQWWQ
Trigger: TTGCCACCATTGAAGTGGGGCGAGCTGATTCGGGCACAGCTGGAAACCAGGAGGCAGCCAGCAGCAGCGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614360.1
ENST00000672872.1
CDS CCA 72 bp GTGTTGGCCGCGCCACATCCTCACACTTCTTCAGGGTaGGCATGCGGCCCGTGCCGTCATCCACCAGACACT +
Preference number: 6 (lower is better)
Translates to: VLAAPHPHTSSG*ACGPCRHPPDT
Trigger: AGTGTCTGGTGGATGACGGCACGGGCCGCATGCCCACCCTGAAGAAGTGTGAGGATGTGGCGCGGCCAACAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000541995.5
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
ENST00000673376.1
CDS CCA 72 bp GGGCACTTGGCCTCACGGCATCAGCCTGACCTTTTCTaGGCCGGTAGTCGGGGATGCTCCGATCGAGGGAGA +
Preference number: 6 (lower is better)
Translates to: GHLASRHQPDLF*AGSRGCSDRGR
Trigger: TCTCCCTCGATCGGAGCATCCCCGACTACCGGCCCAGAAAAGGTCAGGCTGATGCCGTGAGGCCAAGTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000540493.1
ENST00000673050.1
CDS CCA 72 bp GCTGGCCTTGGCAGCCCCAGCTGGTCTGTGCAATGGTaGGATTCACGGTGGGCACTTGGCCTCACGGCATCA +
Preference number: 6 (lower is better)
Translates to: AGLGSPSWSVQW*DSRWALGLTAS
Trigger: TGATGCCGTGAGGCCAAGTGCCCACCGTGAATCCCACCATTGCACAGACCAGCTGGGGCTGCCAAGGCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540493.1
ENST00000673050.1
CDS CCA 72 bp GTTGCTGGCCTTGGCAGCCCCAGCTGGTCTGTGCAATaGTGGGATTCACGGTGGGCACTTGGCCTCACGGCA +
Preference number: 6 (lower is better)
Translates to: VAGLGSPSWSVQ*WDSRWALGLTA
Trigger: TGCCGTGAGGCCAAGTGCCCACCGTGAATCCCACCATTGCACAGACCAGCTGGGGCTGCCAAGGCCAGCAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540493.1
ENST00000673050.1
CDS CAA 90 bp CTCAGCCCCTCCATGTCCCTTCTTTCCCCCGTGTCTAGGCTGTCCTaGCCAGGCAGTGGACTTTCGCTCTTGCCCTGCTCAGCCGCTTCC +
Preference number: 6 (lower is better)
Translates to: LSPSMSLLSPVSRLS*PGSGLSLLPCSAAS
Trigger: GGAAGCGGCTGAGCAGGGCAAGAGCGAAAGTCCACTGCCTGGCAAGGACAGCCTAGACACGGGGGAAAGAAGGGACATGGAGGGGCTGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535208.1
ENST00000614360.1
ENST00000671851.1
ENST00000672872.1
CDS GCA 72 bp CAGGGGACCGAGGGCCTGCAGGGATTCGAAAACCAGTaGCGGACGCAGCCTTCCTCCCTTACAGCAAGAGCT +
Preference number: 6 (lower is better)
Translates to: QGTEGLQGFENQ*RTQPSSLTARA
Trigger: AGCTCTTGCTGTAAGGGAGGAAGGCTGCGTCCGGCACTGGTTTTCGAATCCCTGCAGGCCCTCGGTCCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000540493.1
ENST00000673050.1
CDS CCA 72 bp CCGAGCACCTCTGTACCACCAGCCGGAGCCCAAAGTTaGCATCTTTGGACATCTCCACCTCCAGGCAGCGGC +
Preference number: 6 (lower is better)
Translates to: PSTSVPPAGAQS*HLWTSPPPGSG
Trigger: GCCGCTGCCTGGAGGTGGAGATGTCCAAAGATGCCAACTTTGGGCTCCGGCTGGTGGTACAGAGGTGCTCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000541995.5
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
ENST00000673376.1
CDS CAA 72 bp CCCGAGCACCTCTGTACCACCAGCCGGAGCCCAAAGTaGGCATCTTTGGACATCTCCACCTCCAGGCAGCGG +
Preference number: 6 (lower is better)
Translates to: PEHLCTTSRSPK*ASLDISTSRQR
Trigger: CCGCTGCCTGGAGGTGGAGATGTCCAAAGATGCCAACTTTGGGCTCCGGCTGGTGGTACAGAGGTGCTCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000541995.5
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
ENST00000673376.1
CDS CAA 72 bp GGGTCCGGGCGGAGGTGGGGTCAGTGCCGTGCGTGTTaGATCCAGTTTCTGATCATCCACTTCTGCCCCGAG +
Preference number: 6 (lower is better)
Translates to: GSGRRWGQCRAC*IQFLIIHFCPE
Trigger: CTCGGGGCAGAAGTGGATGATCAGAAACTGGATCAAACACGCACGGCACTGACCCCACCTCCGCCCGGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000541995.5
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
ENST00000673376.1
CDS CAA 72 bp TGGCCTCTGGGACGACCTCCAGCAGTTTCAGCCTCCTaGTCTACCCCCAGTACAGAGGCCACGGTGACTCGG +
Preference number: 6 (lower is better)
Translates to: WPLGRPPAVSAS*STPSTEATVTR
Trigger: CCGAGTCACCGTGGCCTCTGTACTGGGGGTAGACAAGGAGGCTGAAACTGCTGGAGGTCGTCCCAGAGGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000538356.1
ENST00000672682.1
CDS TCA 72 bp TCCAGGTACCACTTGAAGCTGCGACACTTCAGCCTCTaGCGCAGGGCCAGCCTCTCAGACACGTCCCCGAAG +
Preference number: 6 (lower is better)
Translates to: SRYHLKLRHFSL*RRASLSDTSPK
Trigger: CTTCGGGGACGTGTCTGAGAGGCTGGCCCTGCGTCAGAGGCTGAAGTGTCGCAGCTTCAAGTGGTACCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000538356.1
ENST00000541995.5
ENST00000671997.1
ENST00000672682.1
ENST00000672816.1
ENST00000672944.1
ENST00000673376.1
CDS GCA 72 bp GGCCCTGCAGGCGGCAGTACACGGAGAACAGGACGATaGCCACGAACACCAGGATGTTCACCGTCAGCAAAG +
Preference number: 6 (lower is better)
Translates to: GPAGGSTRRTGR*PRTPGCSPSAK
Trigger: CTTTGCTGACGGTGAACATCCTGGTGTTCGTGGGCATCGTCCTGTTCTCCGTGTACTGCCGCCTGCAGGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000424720.6
ENST00000672944.1
ENST00000673497.1
CDS GCA 72 bp GCCTGGCAAGGTCACGGTGACCTCCACACCAGCCCATaGAATTCCAGGCTTCCCATTGCCCCTGAGAAGGTC +
Preference number: 6 (lower is better)
Translates to: AWQGHGDLHTSP*NSRLPIAPEKV
Trigger: GACCTTCTCAGGGGCAATGGGAAGCCTGGAATTGCATGGGCTGGTGTGGAGGTCACCGTGACCTTGCCAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614360.1
ENST00000672872.1
CDS CCA 72 bp CCATCCACACCTCGGCGGCGCGCAGGGCGTTGCGCTTaGCATAGTAGTCAATGTCGTTGTTGTAGGGCTTCC +
Preference number: 6 (lower is better)
Translates to: PSTPRRRAGRCA*HSSQCRCCRAS
Trigger: GGAAGCCCTACAACAACGACATTGACTACTATGCCAAGCGCAACGCCCTGCGCGCCGCCGAGGTGTGGATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000538356.1
ENST00000541995.5
ENST00000542942.1
ENST00000671997.1
ENST00000672032.1
ENST00000672682.1
ENST00000672816.1
ENST00000672944.1
ENST00000673376.1
CDS CCA 72 bp CCACCCGTCTTCAGAAGCGCCTGGCACACTGGCCTCTaGGACGACCTCCAGCAGTTTCAGCCTCCTTGTCTA +
Preference number: 6 (lower is better)
Translates to: PPVFRSAWHTGL*DDLQQFQPPCL
Trigger: TAGACAAGGAGGCTGAAACTGCTGGAGGTCGTCCCAGAGGCCAGTGTGCCAGGCGCTTCTGAAGACGGGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538356.1
ENST00000672682.1
CDS GCA 72 bp CATCCTCACACTTCTTCAGGGTGGGCATGCGGCCCGTaGCGTCATCCACCAGACACTTGGAGTCAGGCAAGA +
Preference number: 6 (lower is better)
Translates to: HPHTSSGWACGP*RHPPDTWSQAR
Trigger: TCTTGCCTGACTCCAAGTGTCTGGTGGATGACGGCACGGGCCGCATGCCCACCCTGAAGAAGTGTGAGGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000541995.5
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
ENST00000673376.1
CDS GCA 72 bp TCTGTGGGGGTCCGGGCGGAGGTGGGGTCAGTGCCGTaGGTGTTTGATCCAGTTTCTGATCATCCACTTCTG +
Preference number: 6 (lower is better)
Translates to: SVGVRAEVGSVP*VFDPVSDHPLL
Trigger: CAGAAGTGGATGATCAGAAACTGGATCAAACACGCACGGCACTGACCCCACCTCCGCCCGGACCCCCACAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000541995.5
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
ENST00000673376.1
CDS CCA 72 bp CACCTCAAACGTGCTGTACTTGATGTTGTCGATGGCTaGCAGCACGATGCGACGCCGGTCCTCTCGGATCCG +
Preference number: 6 (lower is better)
Translates to: HLKRAVLDVVDG*QHDATPVLSDP
Trigger: CGGATCCGAGAGGACCGGCGTCGCATCGTGCTGCCAGCCATCGACAACATCAAGTACAGCACGTTTGAGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000424720.6
ENST00000672944.1
ENST00000673497.1
CDS CAA 90 bp ACGCACACAGGGCTCCATGTGTGGCCTTTATGGAGCTTGAATTCATaGCACTCAGCAGAGGGGAAGGCAGGTGATGAGCGGGCGTCGTCC +
Preference number: 6 (lower is better)
Translates to: THTGLHVWPLWSLNS*HSAEGKAGDERASS
Trigger: GGACGACGCCCGCTCATCACCTGCCTTCCCCTCTGCTGAGTGCAATGAATTCAAGCTCCATAAAGGCCACACATGGAGCCCTGTGTGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614360.1
ENST00000672872.1
CDS CAA 90 bp TTGGAAAGCATCAGAGTTCAGCAAGATCACGGCACCCAGGACCACTaGAGAGCTGCAGTGATTGAGGGCTGGGCAGAGGCGACGCAGCTG +
Preference number: 6 (lower is better)
Translates to: LESIRVQQDHGTQDH*RAAVIEGWAEATQL
Trigger: CAGCTGCGTCGCCTCTGCCCAGCCCTCAATCACTGCAGCTCTCAAGTGGTCCTGGGTGCCGTGATCTTGCTGAACTCTGATGCTTTCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614360.1
ENST00000672872.1
CDS TCA 72 bp CTGTCAAGCTTGGAGGCCTTCGGCGCATTTAGCCGTTaGAGGAAGTACCCACCGTGGTGTGCTCCAACCAGC +
Preference number: 6 (lower is better)
Translates to: LSSLEAFGAFSR*RKYPPWCAPTS
Trigger: GCTGGTTGGAGCACACCACGGTGGGTACTTCCTTCAACGGCTAAATGCGCCGAAGGCCTCCAAGCTTGACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614360.1
ENST00000672872.1
CDS GCA 72 bp AGTCATCCATCCACACCTCGGCGGCGCGCAGGGCGTTaGGCTTGGCATAGTAGTCAATGTCGTTGTTGTAGG +
Preference number: 6 (lower is better)
Translates to: SHPSTPRRRAGR*AWHSSQCRCCR
Trigger: CCTACAACAACGACATTGACTACTATGCCAAGCGCAACGCCCTGCGCGCCGCCGAGGTGTGGATGGATGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000538356.1
ENST00000541995.5
ENST00000542942.1
ENST00000671997.1
ENST00000672032.1
ENST00000672682.1
ENST00000672816.1
ENST00000672944.1
ENST00000673376.1
CDS GCA 72 bp CGTGCGTGTTTGATCCAGTTTCTGATCATCCACTTCTaGCCCGAGCACCTCTGTACCACCAGCCGGAGCCCA +
Preference number: 6 (lower is better)
Translates to: RACLIQFLIIHF*PEHLCTTSRSP
Trigger: TGGGCTCCGGCTGGTGGTACAGAGGTGCTCGGGGCAGAAGTGGATGATCAGAAACTGGATCAAACACGCACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328957.13
ENST00000397325.6
ENST00000411988.6
ENST00000541995.5
ENST00000671997.1
ENST00000672816.1
ENST00000672944.1
ENST00000673376.1
CDS GCA 72 bp TTGGCCTTTGCATCCCGAGGGAGCGAACCGCGTTTCTaGATCAGGTTCACATCGTGGCAGGTGGTTTCTGGG +
Preference number: 6 (lower is better)
Translates to: LAFASRGSEPRF*IRFTSWQVVSG
Trigger: CCCAGAAACCACCTGCCACGATGTGAACCTGATGCAGAAACGCGGTTCGCTCCCTCGGGATGCAAAGGCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000397325.6
ENST00000538356.1
ENST00000541995.5
ENST00000542942.1
ENST00000671997.1
ENST00000672032.1
ENST00000672682.1
ENST00000673376.1
CDS CCA 72 bp ATACAAAGCCTGTGCCCAACGCTCAGTCTAGGAAAGTaGGTGATCACCCCGGCGTCCACCCTCCCTCCACTT +
Preference number: 6 (lower is better)
Translates to: IQSLCPTLSLGK*VITPASTLPPL
Trigger: AAGTGGAGGGAGGGTGGACGCCGGGGTGATCACCCACTTTCCTAGACTGAGCGTTGGGCACAGGCTTTGTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614360.1
ENST00000672872.1
CDS CAA 72 bp GCATACTGCTGCACCTCAAACGTGCTGTACTTGATGTaGTCGATGGCTGGCAGCACGATGCGACGCCGGTCC +
Preference number: 6 (lower is better)
Translates to: AYCCTSNVLYLM*SMAGSTMRRRS
Trigger: GGACCGGCGTCGCATCGTGCTGCCAGCCATCGACAACATCAAGTACAGCACGTTTGAGGTGCAGCAGTATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000424720.6
ENST00000672944.1
ENST00000673497.1
CDS TCA 72 bp CGTTCGCATACTGCTGCACCTCAAACGTGCTGTACTTaGTGTTGTCGATGGCTGGCAGCACGATGCGACGCC +
Preference number: 6 (lower is better)
Translates to: RSHTAAPQTCCT*CCRWLAARCDA
Trigger: GGCGTCGCATCGTGCTGCCAGCCATCGACAACATCAAGTACAGCACGTTTGAGGTGCAGCAGTATGCGAACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328957.13
ENST00000424720.6
ENST00000672944.1
ENST00000673497.1
CDS GCA 72 bp CCAGCCCATCGCAGGTCAGAGAAAAGCCAGACGCCCTaGTCCACATCTCTCTCATACTTCTCCGCTCTTCAC +
Preference number: 6 (lower is better)
Translates to: PAHRRSEKSQTP*STSLSYFSALH
Trigger: GTGAAGAGCGGAGAAGTATGAGAGAGATGTGGAGCAGGGCGTCTGGCTTTTCTCTGACCTGCGATGGGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614360.1
ENST00000672872.1
CDS CCA 72 bp TTCCCGCCGGCTGTTGCGGACAATCTTCACGAGGCCTaGGTACCGCTTGTTGACGTACTGGTCCAGATTGAA +
Preference number: 6 (lower is better)
Translates to: FPPAVADNLHEA*VPLVDVLVQIE
Trigger: TTCAATCTGGACCAGTACGTCAACAAGCGGTACCCAGGCCTCGTGAAGATTGTCCGCAACAGCCGGCGGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000424720.6
ENST00000535208.1
ENST00000671851.1
ENST00000672944.1
ENST00000673497.1
CDS CAA 90 bp CGCCGGCTGTTGCGGACAATCTTCACGAGGCCTGGGTACCGCTTGTaGACGTACTGGTCCAGATTGAACTTGAGTTCCACGTTGTCACTG +
Preference number: 6 (lower is better)
Translates to: RRLLRTIFTRPGYRL*TYWSRLNLSSTLSL
Trigger: CAGTGACAACGTGGAACTCAAGTTCAATCTGGACCAGTACGTCAACAAGCGGTACCCAGGCCTCGTGAAGATTGTCCGCAACAGCCGGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000424720.6
ENST00000535208.1
ENST00000671851.1
ENST00000672944.1
ENST00000673497.1
CDS CAA 90 bp TCCCGCCGGCTGTTGCGGACAATCTTCACGAGGCCTGGGTACCGCTaGTTGACGTACTGGTCCAGATTGAACTTGAGTTCCACGTTGTCA +
Preference number: 6 (lower is better)
Translates to: SRRLLRTIFTRPGYR*LTYWSRLNLSSTLS
Trigger: TGACAACGTGGAACTCAAGTTCAATCTGGACCAGTACGTCAACAAGCGGTACCCAGGCCTCGTGAAGATTGTCCGCAACAGCCGGCGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000424720.6
ENST00000535208.1
ENST00000671851.1
ENST00000672944.1
ENST00000673497.1
CDS GCA 72 bp GCGTCCTCCCCACTCCGATGTCACAGAGGAAACAAATaGAAACCGTTCAGCAGTGGCCCCCGAATAACTCAG +
Preference number: 6 (lower is better)
Translates to: ASSPLRCHRGNK*KPFSSGPRITQ
Trigger: CTGAGTTATTCGGGGGCCACTGCTGAACGGTTTGCATTTGTTTCCTCTGTGACATCGGAGTGGGGAGGACGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000614360.1
ENST00000672872.1
CDS GCA 72 bp AGGCTGTGTCTGTTCTATGAAATCACAGTTCCACTCTaGTGGTGGGGGCAGCAGTGGCTTCCGGACTCTCCT +
Preference number: 6 (lower is better)
Translates to: RLCLFYEITVPL*WWGQQWLPDSP
Trigger: AGGAGAGTCCGGAAGCCACTGCTGCCCCCACCAGCAGAGTGGAACTGTGATTTCATAGAACAGACACAGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000614360.1
ENST00000672872.1
CDS CCA 72 bp CCCAGGGCCTTGGAGGAAATTCAACCCTGTCAAGCTTaGAGGCCTTCGGCGCATTTAGCCGTTGAAGGAAGT +
Preference number: 6 (lower is better)
Translates to: PRALEEIQPCQA*RPSAHLAVEGS
Trigger: ACTTCCTTCAACGGCTAAATGCGCCGAAGGCCTCCAAGCTTGACAGGGTTGAATTTCCTCCAAGGCCCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614360.1
ENST00000672872.1
CDS CAA 72 bp GGGCTCCATGTGTGGCCTTTATGGAGCTTGAATTCATaGCACTCAGCAGAGGGGAAGGCAGGTGATGAGCGG +
Preference number: 6 (lower is better)
Translates to: GLHVWPLWSLNS*HSAEGKAGDER
Trigger: CCGCTCATCACCTGCCTTCCCCTCTGCTGAGTGCAATGAATTCAAGCTCCATAAAGGCCACACATGGAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614360.1
ENST00000672872.1
CDS TCA 72 bp CAAACCGTTCAGCAGTGGCCCCCGAATAACTCAGCCTaGGTGGAACCCGAGGGTTCTTTGCAGGACTTAAGT +
Preference number: 6 (lower is better)
Translates to: QTVQQWPPNNSA*VEPEGSLQDLS
Trigger: ACTTAAGTCCTGCAAAGAACCCTCGGGTTCCACTCAGGCTGAGTTATTCGGGGGCCACTGCTGAACGGTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000614360.1
ENST00000672872.1
CDS CCA 72 bp GGGAGCGAACCGCGTTTCTGCATCAGGTTCACATCGTaGCAGGTGGTTTCTGGGTTTCTGTCTGTTGTCTCT +
Preference number: 6 (lower is better)
Translates to: GSEPRFCIRFTS*QVVSGFLSVVS
Trigger: AGAGACAACAGACAGAAACCCAGAAACCACCTGCCACGATGTGAACCTGATGCAGAAACGCGGTTCGCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000397325.6
ENST00000538356.1
ENST00000541995.5
ENST00000542942.1
ENST00000671997.1
ENST00000672032.1
ENST00000672682.1
ENST00000673376.1
CDS CCA 72 bp CTGTGTCTGTTCTATGAAATCACAGTTCCACTCTGCTaGTGGGGGCAGCAGTGGCTTCCGGACTCTCCTTCT +
Preference number: 6 (lower is better)
Translates to: LCLFYEITVPLC*WGQQWLPDSPS
Trigger: AGAAGGAGAGTCCGGAAGCCACTGCTGCCCCCACCAGCAGAGTGGAACTGTGATTTCATAGAACAGACACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000614360.1
ENST00000672872.1
CDS CCA 72 bp AACCGCGTTTCTGCATCAGGTTCACATCGTGGCAGGTaGTTTCTGGGTTTCTGTCTGTTGTCTCTGCTCGGA +
Preference number: 6 (lower is better)
Translates to: NRVSASGSHRGR*FLGFCLLSLLG
Trigger: TCCGAGCAGAGACAACAGACAGAAACCCAGAAACCACCTGCCACGATGTGAACCTGATGCAGAAACGCGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397325.6
ENST00000538356.1
ENST00000671997.1
ENST00000672682.1
CDS CCA 72 bp AACCGCGTTTCTGCATCAGGTTCACATCGTGGCAGGTaGTTTCTGGGTTTCTGTCTGTTGTCTCTGCTGTGG +
Preference number: 6 (lower is better)
Translates to: NRVSASGSHRGR*FLGFCLLSLLW
Trigger: CCACAGCAGAGACAACAGACAGAAACCCAGAAACCACCTGCCACGATGTGAACCTGATGCAGAAACGCGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000541995.5
ENST00000542942.1
ENST00000672032.1
ENST00000673376.1
CDS CCA 72 bp TGTCTGTTCTATGAAATCACAGTTCCACTCTGCTGGTaGGGGCAGCAGTGGCTTCCGGACTCTCCTTCTTTC +
Preference number: 6 (lower is better)
Translates to: CLFYEITVPLCW*GQQWLPDSPSF
Trigger: GAAAGAAGGAGAGTCCGGAAGCCACTGCTGCCCCCACCAGCAGAGTGGAACTGTGATTTCATAGAACAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614360.1
ENST00000672872.1
CDS CAA 72 bp AGGCCTGGGTACCGCTTGTTGACGTACTGGTCCAGATaGAACTTGAGTTCCACGTTGTCACTGTTGTCGTCC +
Preference number: 6 (lower is better)
Translates to: RPGYRLLTYWSR*NLSSTLSLLSS
Trigger: GGACGACAACAGTGACAACGTGGAACTCAAGTTCAATCTGGACCAGTACGTCAACAAGCGGTACCCAGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000424720.6
ENST00000535208.1
ENST00000671851.1
ENST00000672944.1
ENST00000673497.1
CDS CAA 72 bp TTGCGGACAATCTTCACGAGGCCTGGGTACCGCTTGTaGACGTACTGGTCCAGATTGAACTTGAGTTCCACG +
Preference number: 6 (lower is better)
Translates to: LRTIFTRPGYRL*TYWSRLNLSST
Trigger: CGTGGAACTCAAGTTCAATCTGGACCAGTACGTCAACAAGCGGTACCCAGGCCTCGTGAAGATTGTCCGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000424720.6
ENST00000535208.1
ENST00000671851.1
ENST00000672944.1
ENST00000673497.1
CDS CAA 72 bp CTGTTGCGGACAATCTTCACGAGGCCTGGGTACCGCTaGTTGACGTACTGGTCCAGATTGAACTTGAGTTCC +
Preference number: 6 (lower is better)
Translates to: LLRTIFTRPGYR*LTYWSRLNLSS
Trigger: GGAACTCAAGTTCAATCTGGACCAGTACGTCAACAAGCGGTACCCAGGCCTCGTGAAGATTGTCCGCAACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328957.13
ENST00000424720.6
ENST00000535208.1
ENST00000671851.1
ENST00000672944.1
ENST00000673497.1
CDS CCA 72 bp CTGAGTGGAACCCGAGGGTTCTTTGCAGGACTTAAGTaGCGCCGTTTCTGTCAGACAGAAAATAAACTAAGT +
Preference number: 6 (lower is better)
Translates to: LSGTRGFFAGLK*RRFCQTENKLS
Trigger: ACTTAGTTTATTTTCTGTCTGACAGAAACGGCGCCACTTAAGTCCTGCAAAGAACCCTCGGGTTCCACTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614360.1
ENST00000672872.1
CDS CAA 90 bp TGGCGCCGTTTCTGTCAGACAGAAAATAAACTAAGTTTATGGTATTaGGAAAGCATCAGAGTTCAGCAAGATCACGGCACCCAGGACCAC +
Preference number: 6 (lower is better)
Translates to: WRRFCQTENKLSLWY*ESIRVQQDHGTQDH
Trigger: GTGGTCCTGGGTGCCGTGATCTTGCTGAACTCTGATGCTTTCCAAATACCATAAACTTAGTTTATTTTCTGTCTGACAGAAACGGCGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614360.1
ENST00000672872.1
CDS GCA 72 bp TCAAATATGACGATGAATGAAGCAATACAAAGCCTGTaGCCAACGCTCAGTCTAGGAAAGTGGGTGATCACC +
Preference number: 6 (lower is better)
Translates to: SNMTMNEAIQSL*PTLSLGKWVIT
Trigger: GGTGATCACCCACTTTCCTAGACTGAGCGTTGGGCACAGGCTTTGTATTGCTTCATTCATCGTCATATTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614360.1
ENST00000672872.1
CDS TCA 72 bp GAACGTAACATTAAAAGTCTAAGTTGTGGCTTGGGCTaGATTAGAAGCTACAGCACCACACACACATGCACA +
Preference number: 6 (lower is better)
Translates to: ERNIKSLSCGLG*IRSYSTTHTCT
Trigger: TGTGCATGTGTGTGTGGTGCTGTAGCTTCTAATTCAGCCCAAGCCACAACTTAGACTTTTAATGTTACGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614360.1
ENST00000672872.1
CDS CAA 72 bp AAAGCCTCAGAGCTGTGGGTGAGTCTCCAAATGGTTTaGTTTGAACGTAACATTAAAAGTCTAAGTTGTGGC +
Preference number: 6 (lower is better)
Translates to: KASELWVSLQMV*FERNIKSLSCG
Trigger: GCCACAACTTAGACTTTTAATGTTACGTTCAAACAAAACCATTTGGAGACTCACCCACAGCTCTGAGGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614360.1
ENST00000672872.1