RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GALNT7 (Homo sapiens)

Ensembl gene IDs: ENSG00000109586

Ensembl transcript IDs: ENST00000265000.9, ENST00000502407.1, ENST00000503213.1, ENST00000505308.5, ENST00000506317.1, ENST00000512285.5, ENST00000515862.1

Found 259 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ATGCCAGTAGGTAAGGGAGTGAATGCTACACAACTTCCAACCCTATaGGACAGCCTTGGGATGTTCCATATTGTCATTTCTTTTTCAAGC +
Preference number: 1 (lower is better)
Translates to: MPVGKGVNATQLPTL*DSLGMFHIVISFSS
Trigger: GCTTGAAAAAGAAATGACAATATGGAACATCCCAAGGCTGTCCCATAGGGTTGGAAGTTGTGTAGCATTCACTCCCTTACCTACTGGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265000.9
3UTR CCA 90 bp CACAGTTTATCAATGTCCTTCAAACTGATCAGGAGGTTCCAGGTTTaGAGCTATACAGAGTTAATAACAATAGTTGCAGCAGGTTTCAGG +
Preference number: 1 (lower is better)
Translates to: HSLSMSFKLIRRFQV*SYTELITIVAAGFR
Trigger: CCTGAAACCTGCTGCAACTATTGTTATTAACTCTGTATAGCTCCAAACCTGGAACCTCCTGATCAGTTTGAAGGACATTGATAAACTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265000.9
ENST00000505308.5
3UTR-3UTR CCA 90 bp GTCAGAGGCACCCGTTTCCAGAGCATACTCCAATCCCATGCTCCTCGGGCATACATGGAAGCGTATGTATaGACCCACACATTTATACGA +
Preference number: 2 (lower is better)
Translates to: VRGTRFQSILQSHAPRAYMEAYV*THTFIR
Trigger: TCGTATAAATGTGTGGGTCCATACATACGCTTCCAT...GTATGCCCGAGGAGCATGGGATTGGAGTATGCTCTGGAAACGGGTGCCTCTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512285.5
3UTR-3UTR CCA 90 bp TTGGAAGACTCCTTTGCAATCCTAGAAGTAGGTATGGACAGAGGGCACTGGGAAGAAGGAAGGCCACCTTaGCTAATAACCTGTGGCAGT +
Preference number: 2 (lower is better)
Translates to: LEDSFAILEVGMDRGHWEEGRPP*LITCGS
Trigger: ACTGCCACAGGTTATTAGCCAAGGTGGCCTTCCTTC...TTCCCAGTGCCCTCTGTCCATACCTACTTCTAGGATTGCAAAGGAGTCTTCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265000.9
3UTR-3UTR TCA 90 bp CCCGTTTCCAGAGCATACTCCAATCCCATGCTCCTCGGGCATACCCATCTTCATGGTTCTGTATTGTGTTaGTGGCAGCAAAGATCAAAT +
Preference number: 2 (lower is better)
Translates to: PVSRAYSNPMLLGHTHLHGSVLC*WQQRSN
Trigger: ATTTGATCTTTGCTGCCATCAACACAATACAGAACC...ATGAAGATGGGTATGCCCGAGGAGCATGGGATTGGAGTATGCTCTGGAAACGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512285.5
3UTR-3UTR GCA 90 bp TATGGACAGAGGGCACTGGGAATGCCAGTAGGTAAGGGAGTGAATGCTACACAAGTTAATAACAATAGTTaGAGCAGGTTTCAGGCGGTT +
Preference number: 2 (lower is better)
Translates to: YGQRALGMPVGKGVNATQVNNNS*SRFQAV
Trigger: AACCGCCTGAAACCTGCTGCAACTATTGTTATTAAC...TTGTGTAGCATTCACTCCCTTACCTACTGGCATTCCCAGTGCCCTCTGTCCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265000.9
3UTR-3UTR CCA 90 bp TTGGAAGACTCCTTTGCAATCCTAGAAGTAGGTATGGACAGAGGGCACTGGGAAAGGAGGTTCCAGGTTTaGAGCTATACAGAGTTAATA +
Preference number: 2 (lower is better)
Translates to: LEDSFAILEVGMDRGHWERRFQV*SYTELI
Trigger: TATTAACTCTGTATAGCTCCAAACCTGGAACCTCCT...TTCCCAGTGCCCTCTGTCCATACCTACTTCTAGGATTGCAAAGGAGTCTTCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265000.9
3UTR-3UTR GCA 90 bp AATCACAGTTTATCAATGTCCTTCAAACTGATCAGGAGGTTCCAGGTTTGGAGCGTTAATAACAATAGTTaGAGCAGGTTTCAGGCGGTT +
Preference number: 2 (lower is better)
Translates to: NHSLSMSFKLIRRFQVWSVNNNS*SRFQAV
Trigger: AACCGCCTGAAACCTGCTGCAACTATTGTTATTAAC...GCTCCAAACCTGGAACCTCCTGATCAGTTTGAAGGACATTGATAAACTGTGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265000.9
ENST00000505308.5
3UTR CAA 90 bp TCACAGTTTATCAATGTCCTTCAAACTGATCAGGAGGTTCCAGGTTaGGAGCTATACAGAGTTAATAACAATAGTTGCAGCAGGTTTCAG +
Preference number: 2 (lower is better)
Translates to: SQFINVLQTDQEVPG*ELYRVNNNSCSRFQ
Trigger: CTGAAACCTGCTGCAACTATTGTTATTAACTCTGTATAGCTCCAAACCTGGAACCTCCTGATCAGTTTGAAGGACATTGATAAACTGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265000.9
ENST00000505308.5
3UTR-3UTR TCA 90 bp AGACACAACAGGTTGATAATCACCAAGTTATATATGAAAGTCTGGCTACTCCAACAATGTCCTTCAAACTaGTCAGGAGGTTCCAGGTTT +
Preference number: 2 (lower is better)
Translates to: RHNRLIITKLYMKVWLLQQCPSN*SGGSRF
Trigger: AAACCTGGAACCTCCTGATCAGTTTGAAGGACATTG...TTGGAGTAGCCAGACTTTCATATATAACTTGGTGATTATCAACCTGTTGTGTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265000.9
3UTR-3UTR CAA 90 bp TCTTTCTCAGTCTCTTCTCTTGAGGGGTCAGAGGCACCCGTTTCCAGAGCATACTTCATCACCACCCCCTaGGGGTATAATTTCATATGT +
Preference number: 3 (lower is better)
Translates to: SFSVSSLEGSEAPVSRAYFITTP*GYNFIC
Trigger: ACATATGAAATTATACCCCAAGGGGGTGGTGATGAA...GTATGCTCTGGAAACGGGTGCCTCTGACCCCTCAAGAGAAGAGACTGAGAAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000512285.5
3UTR-3UTR CAA 90 bp TTGGAAGACTCCTTTGCAATCCTAGAAGTAGGTATGGACAGAGGGCACTGGGAACAGGAGGTTCCAGGTTaGGAGCTATACAGAGTTAAT +
Preference number: 3 (lower is better)
Translates to: LEDSFAILEVGMDRGHWEQEVPG*ELYRVN
Trigger: ATTAACTCTGTATAGCTCCAAACCTGGAACCTCCTG...TTCCCAGTGCCCTCTGTCCATACCTACTTCTAGGATTGCAAAGGAGTCTTCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265000.9
3UTR CCA 72 bp GGTAAGGGAGTGAATGCTACACAACTTCCAACCCTATaGGACAGCCTTGGGATGTTCCATATTGTCATTTCT +
Preference number: 3 (lower is better)
Translates to: GKGVNATQLPTL*DSLGMFHIVIS
Trigger: AGAAATGACAATATGGAACATCCCAAGGCTGTCCCATAGGGTTGGAAGTTGTGTAGCATTCACTCCCTTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265000.9
3UTR CCA 72 bp GTTGATGGCAGCAAAGATCAAATGGAAGCGTATGTATaGACCCACACATTTATACGAGTTCATGGGGAAGAA +
Preference number: 3 (lower is better)
Translates to: VDGSKDQMEAYV*THTFIRVHGEE
Trigger: TTCTTCCCCATGAACTCGTATAAATGTGTGGGTCCATACATACGCTTCCATTTGATCTTTGCTGCCATCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512285.5
3UTR CCA 72 bp TCAATGTCCTTCAAACTGATCAGGAGGTTCCAGGTTTaGAGCTATACAGAGTTAATAACAATAGTTGCAGCA +
Preference number: 3 (lower is better)
Translates to: SMSFKLIRRFQV*SYTELITIVAA
Trigger: TGCTGCAACTATTGTTATTAACTCTGTATAGCTCCAAACCTGGAACCTCCTGATCAGTTTGAAGGACATTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265000.9
ENST00000505308.5
3UTR TCA 72 bp TATTGTAAAATCACAGTTTATCAATGTCCTTCAAACTaGTCAGGAGGTTCCAGGTTTGGAGCTATACAGAGT +
Preference number: 3 (lower is better)
Translates to: YCKITVYQCPSN*SGGSRFGAIQS
Trigger: ACTCTGTATAGCTCCAAACCTGGAACCTCCTGATCAGTTTGAAGGACATTGATAAACTGTGATTTTACAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265000.9
ENST00000505308.5
CDS-3UTR CCA 90 bp AGGCACCCGTTTCCAGAGCATACTCCAATCCCATGCTCCTCGGGCATACCCATCCCTGCTCAGCGGGCTTaGGTCGTCCGGCCGCGGGGT +
Preference number: 4 (lower is better)
Translates to: RHPFPEHTPIPCSSGIPIPAQRA*VVRPRG
Trigger: ACCCCGCGGCCGGACGACCCAAGCCCGCTGAGCAGG...GATGGGTATGCCCGAGGAGCATGGGATTGGAGTATGCTCTGGAAACGGGTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512285.5
CDS-3UTR CCA 90 bp TCAGAGGCACCCGTTTCCAGAGCATACTCCAATCCCATGCTCCTCGGGCATACCAGTCCCAGGCCCCTCTaGCAAAACCATCTTCATCCC +
Preference number: 4 (lower is better)
Translates to: SEAPVSRAYSNPMLLGHTSPRPL*QNHLHP
Trigger: GGGATGAAGATGGTTTTGCCAGAGGGGCCTGGGACT...GGTATGCCCGAGGAGCATGGGATTGGAGTATGCTCTGGAAACGGGTGCCTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512285.5
CDS-3UTR GCA 90 bp CAGTCTCTTCTCTTGAGGGGTCAGAGGCACCCGTTTCCAGAGCATACTCCAATCTGTCTTCCCTCATCCTaGTCAGCGGGCTTGGGTCGT +
Preference number: 4 (lower is better)
Translates to: QSLLLRGQRHPFPEHTPICLPSS*SAGLGR
Trigger: ACGACCCAAGCCCGCTGAGCAGGATGAGGGAAGACA...GATTGGAGTATGCTCTGGAAACGGGTGCCTCTGACCCCTCAAGAGAAGAGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512285.5
CDS-3UTR CCA 90 bp TATACAGAGTTAATAACAATAGTTGCAGCAGGTTTCAGGCGGTTTTCAGTCCTGCCTGCTCAGCGGGCTTaGGTCGTCCGGCCGCGGGGT +
Preference number: 4 (lower is better)
Translates to: YTELITIVAAGFRRFSVLPAQRA*VVRPRG
Trigger: ACCCCGCGGCCGGACGACCCAAGCCCGCTGAGCAGG...CAGGACTGAAAACCGCCTGAAACCTGCTGCAACTATTGTTATTAACTCTGTATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265000.9
CDS-3UTR TCA 90 bp TCAGAGGCACCCGTTTCCAGAGCATACTCCAATCCCATGCTCCTCGGGCATACCGATACTGCCTCTGCATaGTATCTTTCTGGGAATCTC +
Preference number: 4 (lower is better)
Translates to: SEAPVSRAYSNPMLLGHTDTASA*YLSGNL
Trigger: GAGATTCCCAGAAAGATATCATGCAGAGGCAGTATC...GGTATGCCCGAGGAGCATGGGATTGGAGTATGCTCTGGAAACGGGTGCCTCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512285.5
CDS-3UTR GCA 90 bp TCAGAGGCACCCGTTTCCAGAGCATACTCCAATCCCATGCTCCTCGGGCATACCGTGAGATACTGCCTCTaGATGATATCTTTCTGGGAA +
Preference number: 4 (lower is better)
Translates to: SEAPVSRAYSNPMLLGHTVRYCL*MISFWE
Trigger: TTCCCAGAAAGATATCATGCAGAGGCAGTATCTCAC...GGTATGCCCGAGGAGCATGGGATTGGAGTATGCTCTGGAAACGGGTGCCTCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512285.5
CDS-3UTR GCA 90 bp TATGGACAGAGGGCACTGGGAATGCCAGTAGGTAAGGGAGTGAATGCTACACAACATACTCCAATCCCATaGTCCTCGGGCATACCCATC +
Preference number: 4 (lower is better)
Translates to: YGQRALGMPVGKGVNATQHTPIP*SSGIPI
Trigger: GATGGGTATGCCCGAGGAGCATGGGATTGGAGTATG...TTGTGTAGCATTCACTCCCTTACCTACTGGCATTCCCAGTGCCCTCTGTCCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265000.9
CDS-3UTR CCA 90 bp TTGGAAGACTCCTTTGCAATCCTAGAAGTAGGTATGGACAGAGGGCACTGGGAAATAATCCCCCAGCCATaGCTGGGGACCGATACGGTT +
Preference number: 4 (lower is better)
Translates to: LEDSFAILEVGMDRGHWEIIPQP*LGTDTV
Trigger: AACCGTATCGGTCCCCAGCCATGGCTGGGGGATTAT...TTCCCAGTGCCCTCTGTCCATACCTACTTCTAGGATTGCAAAGGAGTCTTCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265000.9
CDS-3UTR TCA 90 bp CCAGGTTTGGAGCTATACAGAGTTAATAACAATAGTTGCAGCAGGTTTCAGGCGGACGCTGCGGTCCAGTaGGATCATGTCACTTGCCAC +
Preference number: 4 (lower is better)
Translates to: PGLELYRVNNNSCSRFQADAAVQ*DHVTCH
Trigger: GTGGCAAGTGACATGATCTCACTGGACCGCAGCGTC...CGCCTGAAACCTGCTGCAACTATTGTTATTAACTCTGTATAGCTCCAAACCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265000.9
CDS-3UTR TCA 90 bp GCATACCCATCTTCATCACCACCCCCTTGGGGTATAATTTCATATGTGTTGCCACTTGGCGTAAGTCATTaGCGCTGCGGTCCAGTGAGA +
Preference number: 4 (lower is better)
Translates to: AYPSSSPPPWGIISYVLPLGVSH*RCGPVR
Trigger: TCTCACTGGACCGCAGCGTCAATGACTTACGCCAAG...TGGCAACACATATGAAATTATACCCCAAGGGGGTGGTGATGAAGATGGGTATGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512285.5
CDS-3UTR GCA 90 bp TCAAATGGAAGCGTATGTATGGACCCACACATTTATACGAGTTCATGGGGAAGACAGGAGCTAGTCCATTaGCGCCTCGGTTGGGCATGG +
Preference number: 4 (lower is better)
Translates to: SNGSVCMDPHIYTSSWGRQELVH*RLGWAW
Trigger: CCATGCCCAACCGAGGCGGCAATGGACTAGCTCCTG...TCTTCCCCATGAACTCGTATAAATGTGTGGGTCCATACATACGCTTCCATTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512285.5
CDS-3UTR CCA 90 bp TTGGAAGACTCCTTTGCAATCCTAGAAGTAGGTATGGACAGAGGGCACTGGGAATTCCCTCCCATCCTGTaGCAGGGTCCTAGTTCAACA +
Preference number: 4 (lower is better)
Translates to: LEDSFAILEVGMDRGHWEFPPIL*QGPSST
Trigger: TGTTGAACTAGGACCCTGCCACAGGATGGGAGGGAA...TTCCCAGTGCCCTCTGTCCATACCTACTTCTAGGATTGCAAAGGAGTCTTCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265000.9
CDS-3UTR TCA 90 bp GCATACCCATCTTCATCACCACCCCCTTGGGGTATAATTTCATATGTGTTGCCAATGGTACCACAGGTTTaGATCTGTCCTCCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: AYPSSSPPPWGIISYVLPMVPQV*ICPPQE
Trigger: CTCCTGGGGAGGACAGATTCAAACCTGTGGTACCAT...TGGCAACACATATGAAATTATACCCCAAGGGGGTGGTGATGAAGATGGGTATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000512285.5
CDS-3UTR GCA 90 bp GTTCCAGGTTTGGAGCTATACAGAGTTAATAACAATAGTTGCAGCAGGTTTCAGCAGGAGCTAGTCCATTaGCGCCTCGGTTGGGCATGG +
Preference number: 4 (lower is better)
Translates to: VPGLELYRVNNNSCSRFQQELVH*RLGWAW
Trigger: CCATGCCCAACCGAGGCGGCAATGGACTAGCTCCTG...CTGAAACCTGCTGCAACTATTGTTATTAACTCTGTATAGCTCCAAACCTGGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265000.9
CDS-3UTR CCA 90 bp CCCGTTTCCAGAGCATACTCCAATCCCATGCTCCTCGGGCATACCCATCTTCATTACTTGCATTCTTCTTaGCGTAAGTCATTGACGCTG +
Preference number: 4 (lower is better)
Translates to: PVSRAYSNPMLLGHTHLHYLHSS*RKSLTL
Trigger: CAGCGTCAATGACTTACGCCAAGAAGAATGCAAGTA...ATGAAGATGGGTATGCCCGAGGAGCATGGGATTGGAGTATGCTCTGGAAACGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512285.5
CDS-3UTR CCA 90 bp GTTCCAGGTTTGGAGCTATACAGAGTTAATAACAATAGTTGCAGCAGGTTTCAGTCCCCCAGCCATGGCTaGGGACCGATACGGTTCAGT +
Preference number: 4 (lower is better)
Translates to: VPGLELYRVNNNSCSRFQSPSHG*GPIRFS
Trigger: ACTGAACCGTATCGGTCCCCAGCCATGGCTGGGGGA...CTGAAACCTGCTGCAACTATTGTTATTAACTCTGTATAGCTCCAAACCTGGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265000.9
CDS-3UTR CCA 90 bp TCTTTCTCAGTCTCTTCTCTTGAGGGGTCAGAGGCACCCGTTTCCAGAGCATACGCAGCAAAGATCAAATaGAAGCGTATGTATGGACCC +
Preference number: 4 (lower is better)
Translates to: SFSVSSLEGSEAPVSRAYAAKIK*KRMYGP
Trigger: GGGTCCATACATACGCTTCCATTTGATCTTTGCTGC...GTATGCTCTGGAAACGGGTGCCTCTGACCCCTCAAGAGAAGAGACTGAGAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512285.5
CDS-3UTR TCA 90 bp TCATATGTGTTGCCATTTATGACATCTATAAGCGGCACAGTGCAAATGGTTCTGGACGCTGCGGTCCAGTaGGATCATGTCACTTGCCAC +
Preference number: 4 (lower is better)
Translates to: SYVLPFMTSISGTVQMVLDAAVQ*DHVTCH
Trigger: GTGGCAAGTGACATGATCTCACTGGACCGCAGCGTC...CAGAACCATTTGCACTGTGCCGCTTATAGATGTCATAAATGGCAACACATATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512285.5
CDS-3UTR TCA 90 bp AGTTTTTGTCTTTCTCAGTCTCTTCTCTTGAGGGGTCAGAGGCACCCGTTTCCACCAAGTTTAGCCTTCTaGGCACCAATACTTCGTGCT +
Preference number: 4 (lower is better)
Translates to: SFCLSQSLLLRGQRHPFPPSLAF*APILRA
Trigger: AGCACGAAGTATTGGTGCTCAGAAGGCTAAACTTGG...TGGAAACGGGTGCCTCTGACCCCTCAAGAGAAGAGACTGAGAAAGACAAAAACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512285.5
CDS-3UTR TCA 90 bp CTATACAGAGTTAATAACAATAGTTGCAGCAGGTTTCAGGCGGTTTTCAGTCCTCTCAGTCTCTTCTCTTaGGGGGTCAGAGGCACCCGT +
Preference number: 4 (lower is better)
Translates to: LYRVNNNSCSRFQAVFSPLSLFS*GVRGTR
Trigger: ACGGGTGCCTCTGACCCCTCAAGAGAAGAGACTGAG...AGGACTGAAAACCGCCTGAAACCTGCTGCAACTATTGTTATTAACTCTGTATAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265000.9
CDS-3UTR TCA 90 bp AATGGAAGCGTATGTATGGACCCACACATTTATACGAGTTCATGGGGAAGAAAACTCAGTCTCTTCTCTTaGGGGGTCAGAGGCACCCGT +
Preference number: 4 (lower is better)
Translates to: NGSVCMDPHIYTSSWGRKLSLFS*GVRGTR
Trigger: ACGGGTGCCTCTGACCCCTCAAGAGAAGAGACTGAG...TTTTCTTCCCCATGAACTCGTATAAATGTGTGGGTCCATACATACGCTTCCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000512285.5
CDS-3UTR GCA 90 bp CTATACAGAGTTAATAACAATAGTTGCAGCAGGTTTCAGGCGGTTTTCAGTCCTTGTCTTCCCTCATCCTaGTCAGCGGGCTTGGGTCGT +
Preference number: 4 (lower is better)
Translates to: LYRVNNNSCSRFQAVFSPCLPSS*SAGLGR
Trigger: ACGACCCAAGCCCGCTGAGCAGGATGAGGGAAGACA...AGGACTGAAAACCGCCTGAAACCTGCTGCAACTATTGTTATTAACTCTGTATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265000.9
CDS-3UTR GCA 90 bp GTCAGAGGCACCCGTTTCCAGAGCATACTCCAATCCCATGCTCCTCGGGCATACTTAAATGTGAGATACTaGCTCTGCATGATATCTTTC +
Preference number: 4 (lower is better)
Translates to: VRGTRFQSILQSHAPRAYLNVRY*LCMISF
Trigger: GAAAGATATCATGCAGAGGCAGTATCTCACATTTAA...GTATGCCCGAGGAGCATGGGATTGGAGTATGCTCTGGAAACGGGTGCCTCTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512285.5
CDS-3UTR GCA 90 bp CCCGTTTCCAGAGCATACTCCAATCCCATGCTCCTCGGGCATACCCATCTTCATAATGCTGGCTTGAATTaGTTGTTTGAATTCTGGTCC +
Preference number: 4 (lower is better)
Translates to: PVSRAYSNPMLLGHTHLHNAGLN*LFEFWS
Trigger: GGACCAGAATTCAAACAAGCAATTCAAGCCAGCATT...ATGAAGATGGGTATGCCCGAGGAGCATGGGATTGGAGTATGCTCTGGAAACGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512285.5
CDS-3UTR CCA 90 bp GCTACACAACTTCCAACCCTATGGGACAGCCTTGGGATGTTCCATATTGTCATTGAAGGAAGGCCACCTTaGCTAATAACCTGTGGCAGT +
Preference number: 4 (lower is better)
Translates to: ATQLPTLWDSLGMFHIVIEGRPP*LITCGS
Trigger: ACTGCCACAGGTTATTAGCCAAGGTGGCCTTCCTTC...AATGACAATATGGAACATCCCAAGGCTGTCCCATAGGGTTGGAAGTTGTGTAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265000.9
CDS-3UTR CCA 90 bp TGGAGCTATACAGAGTTAATAACAATAGTTGCAGCAGGTTTCAGGCGGTTTTCATCCCCCAGCCATGGCTaGGGACCGATAAGGTTCAGT +
Preference number: 4 (lower is better)
Translates to: WSYTELITIVAAGFRRFSSPSHG*GPIRFS
Trigger: ACTGAACCTTATCGGTCCCCAGCCATGGCTGGGGGA...TGAAAACCGCCTGAAACCTGCTGCAACTATTGTTATTAACTCTGTATAGCTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505308.5
CDS-3UTR TCA 90 bp TTGGAAGACTCCTTTGCAATCCTAGAAGTAGGTATGGACAGAGGGCACTGGGAAGATACTGCCTCTGCATaGTATCTTTCTGGGAATCTC +
Preference number: 4 (lower is better)
Translates to: LEDSFAILEVGMDRGHWEDTASA*YLSGNL
Trigger: GAGATTCCCAGAAAGATATCATGCAGAGGCAGTATC...TTCCCAGTGCCCTCTGTCCATACCTACTTCTAGGATTGCAAAGGAGTCTTCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265000.9
CDS-3UTR CCA 90 bp AGTTTTTGTCTTTCTCAGTCTCTTCTCTTGAGGGGTCAGAGGCACCCGTTTCCATGCATGATATCTTTCTaGGAATCTCCTCCAGCATGG +
Preference number: 4 (lower is better)
Translates to: SFCLSQSLLLRGQRHPFPCMISF*ESPPAW
Trigger: CCATGCTGGAGGAGATTCCCAGAAAGATATCATGCA...TGGAAACGGGTGCCTCTGACCCCTCAAGAGAAGAGACTGAGAAAGACAAAAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512285.5
CDS-3UTR CCA 90 bp TTGGAAGACTCCTTTGCAATCCTAGAAGTAGGTATGGACAGAGGGCACTGGGAACCTATGGGACAGCCTTaGGATGTTCCATATTGTCAT +
Preference number: 4 (lower is better)
Translates to: LEDSFAILEVGMDRGHWEPMGQP*DVPYCH
Trigger: ATGACAATATGGAACATCCCAAGGCTGTCCCATAGG...TTCCCAGTGCCCTCTGTCCATACCTACTTCTAGGATTGCAAAGGAGTCTTCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265000.9
CDS-3UTR CCA 90 bp GTTCCAGGTTTGGAGCTATACAGAGTTAATAACAATAGTTGCAGCAGGTTTCAGAGTCCCAGGCCCCTCTaGCAAAACCATCTTCATCCC +
Preference number: 4 (lower is better)
Translates to: VPGLELYRVNNNSCSRFQSPRPL*QNHLHP
Trigger: GGGATGAAGATGGTTTTGCCAGAGGGGCCTGGGACT...CTGAAACCTGCTGCAACTATTGTTATTAACTCTGTATAGCTCCAAACCTGGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505308.5
CDS-3UTR TCA 90 bp TATACAGAGTTAATAACAATAGTTGCAGCAGGTTTCAGGCGGTTTTCAGTCCTGATGGTACCACAGGTTTaGATCTGTCCTCCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: YTELITIVAAGFRRFSVLMVPQV*ICPPQE
Trigger: CTCCTGGGGAGGACAGATTCAAACCTGTGGTACCAT...CAGGACTGAAAACCGCCTGAAACCTGCTGCAACTATTGTTATTAACTCTGTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265000.9
CDS-3UTR TCA 90 bp CCAGGTTTGGAGCTATACAGAGTTAATAACAATAGTTGCAGCAGGTTTCAGGCGCCAAGTTTAGCCTTCTaGGCACCAATACTTCGTGCT +
Preference number: 4 (lower is better)
Translates to: PGLELYRVNNNSCSRFQAPSLAF*APILRA
Trigger: AGCACGAAGTATTGGTGCTCAGAAGGCTAAACTTGG...CGCCTGAAACCTGCTGCAACTATTGTTATTAACTCTGTATAGCTCCAAACCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265000.9
ENST00000505308.5
CDS-3UTR TCA 90 bp TTGGAAGACTCCTTTGCAATCCTAGAAGTAGGTATGGACAGAGGGCACTGGGAATGGCAAAGGGTAGTGTaGGGTGATATCATAAGCTAT +
Preference number: 4 (lower is better)
Translates to: LEDSFAILEVGMDRGHWEWQRVV*GDIISY
Trigger: ATAGCTTATGATATCACCTCACACTACCCTTTGCCA...TTCCCAGTGCCCTCTGTCCATACCTACTTCTAGGATTGCAAAGGAGTCTTCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265000.9
CDS-3UTR TCA 90 bp CCAGGTTTGGAGCTATACAGAGTTAATAACAATAGTTGCAGCAGGTTTCAGGCGTTGGAGATGAATACTTaGTGCAGGACCTCTGAGCGA +
Preference number: 4 (lower is better)
Translates to: PGLELYRVNNNSCSRFQALEMNT*CRTSER
Trigger: TCGCTCAGAGGTCCTGCATCAAGTATTCATCTCCAA...CGCCTGAAACCTGCTGCAACTATTGTTATTAACTCTGTATAGCTCCAAACCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265000.9
ENST00000505308.5
CDS-3UTR TCA 90 bp TTGGAAGACTCCTTTGCAATCCTAGAAGTAGGTATGGACAGAGGGCACTGGGAATATGGCAGCAGCTTCTaGTGTTTTTGTTTGGTAGGT +
Preference number: 4 (lower is better)
Translates to: LEDSFAILEVGMDRGHWEYGSSF*CFCLVG
Trigger: ACCTACCAAACAAAAACATCAGAAGCTGCTGCCATA...TTCCCAGTGCCCTCTGTCCATACCTACTTCTAGGATTGCAAAGGAGTCTTCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265000.9
CDS-3UTR GCA 90 bp AATGGAAGCGTATGTATGGACCCACACATTTATACGAGTTCATGGGGAAGAAAACATACTCCAATCCCATaGTCCTCGGGCATACCCATC +
Preference number: 4 (lower is better)
Translates to: NGSVCMDPHIYTSSWGRKHTPIP*SSGIPI
Trigger: GATGGGTATGCCCGAGGAGCATGGGATTGGAGTATG...TTTTCTTCCCCATGAACTCGTATAAATGTGTGGGTCCATACATACGCTTCCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512285.5
CDS-3UTR CCA 90 bp GTTCCAGGTTTGGAGCTATACAGAGTTAATAACAATAGTTGCAGCAGGTTTCAGTTCCCTCCCATCCTGTaGCAGGGTCCTAGTTCAACA +
Preference number: 4 (lower is better)
Translates to: VPGLELYRVNNNSCSRFQFPPIL*QGPSST
Trigger: TGTTGAACTAGGACCCTGCCACAGGATGGGAGGGAA...CTGAAACCTGCTGCAACTATTGTTATTAACTCTGTATAGCTCCAAACCTGGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265000.9
ENST00000505308.5
CDS-3UTR CCA 90 bp TATACAGAGTTAATAACAATAGTTGCAGCAGGTTTCAGGCGGTTTTCAGTCCTGATAATCCCCCAGCCATaGCTGGGGACCGATAAGGTT +
Preference number: 4 (lower is better)
Translates to: YTELITIVAAGFRRFSVLIIPQP*LGTDKV
Trigger: AACCTTATCGGTCCCCAGCCATGGCTGGGGGATTAT...CAGGACTGAAAACCGCCTGAAACCTGCTGCAACTATTGTTATTAACTCTGTATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000505308.5
CDS-3UTR TCA 90 bp TATACAGAGTTAATAACAATAGTTGCAGCAGGTTTCAGGCGGTTTTCAGTCCTGTCTACTCCTTCAACATaGGGCCATGGTACCACAGGT +
Preference number: 4 (lower is better)
Translates to: YTELITIVAAGFRRFSVLSTPST*GHGTTG
Trigger: ACCTGTGGTACCATGGCCTCATGTTGAAGGAGTAGA...CAGGACTGAAAACCGCCTGAAACCTGCTGCAACTATTGTTATTAACTCTGTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265000.9
CDS-3UTR TCA 90 bp AAGACACAACAGGTTGATAATCACCAAGTTATATATGAAAGTCTGGCTACTCCACTTGGCGTAAGTCATTaGCGCTGCGGTCCAGTGAGA +
Preference number: 4 (lower is better)
Translates to: KTQQVDNHQVIYESLATPLGVSH*RCGPVR
Trigger: TCTCACTGGACCGCAGCGTCAATGACTTACGCCAAG...TGGAGTAGCCAGACTTTCATATATAACTTGGTGATTATCAACCTGTTGTGTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265000.9
CDS-3UTR TCA 90 bp AGTTTTTGTCTTTCTCAGTCTCTTCTCTTGAGGGGTCAGAGGCACCCGTTTCCACCAATACTTCGTGCTTaGATTAAACCTTCCCTTCTT +
Preference number: 4 (lower is better)
Translates to: SFCLSQSLLLRGQRHPFPPILRA*IKPSLL
Trigger: AAGAAGGGAAGGTTTAATTCAAGCACGAAGTATTGG...TGGAAACGGGTGCCTCTGACCCCTCAAGAGAAGAGACTGAGAAAGACAAAAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512285.5
CDS-3UTR TCA 90 bp GGTTTGGAGCTATACAGAGTTAATAACAATAGTTGCAGCAGGTTTCAGGCGGTTTTGATTCTGAAAAGCTaGTTCCCTCCCATCCTGTGG +
Preference number: 4 (lower is better)
Translates to: GLELYRVNNNSCSRFQAVLILKS*FPPILW
Trigger: CCACAGGATGGGAGGGAATCAGCTTTTCAGAATCAA...AACCGCCTGAAACCTGCTGCAACTATTGTTATTAACTCTGTATAGCTCCAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265000.9
ENST00000505308.5
CDS-3UTR TCA 90 bp TTGGAAGACTCCTTTGCAATCCTAGAAGTAGGTATGGACAGAGGGCACTGGGAATTTCCTGAAGGAATATaGGTAAATCTGTGCAGGTTC +
Preference number: 4 (lower is better)
Translates to: LEDSFAILEVGMDRGHWEFPEGI*VNLCRF
Trigger: GAACCTGCACAGATTTACTCATATTCCTTCAGGAAA...TTCCCAGTGCCCTCTGTCCATACCTACTTCTAGGATTGCAAAGGAGTCTTCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265000.9
CDS-3UTR TCA 90 bp GGTTTGGAGCTATACAGAGTTAATAACAATAGTTGCAGCAGGTTTCAGGCGGTTTTGGAGATGAATACTTaGTGCAGGACCTCTGAGCGA +
Preference number: 4 (lower is better)
Translates to: GLELYRVNNNSCSRFQAVLEMNT*CRTSER
Trigger: TCGCTCAGAGGTCCTGCATCAAGTATTCATCTCCAA...AACCGCCTGAAACCTGCTGCAACTATTGTTATTAACTCTGTATAGCTCCAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265000.9
ENST00000505308.5
CDS-3UTR GCA 90 bp GTTCCAGGTTTGGAGCTATACAGAGTTAATAACAATAGTTGCAGCAGGTTTCAGGGGAGCTACAAGTGGTaGATACCAGTTAACTGCCAC +
Preference number: 4 (lower is better)
Translates to: VPGLELYRVNNNSCSRFQGSYKW*IPVNCH
Trigger: GTGGCAGTTAACTGGTATGCACCACTTGTAGCTCCC...CTGAAACCTGCTGCAACTATTGTTATTAACTCTGTATAGCTCCAAACCTGGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265000.9
ENST00000505308.5
CDS-3UTR GCA 90 bp GAGCTATACAGAGTTAATAACAATAGTTGCAGCAGGTTTCAGGCGGTTTTCAGTGGGAGCTACAAGTGGTaGATACCAGTTAACTGCCAC +
Preference number: 4 (lower is better)
Translates to: ELYRVNNNSCSRFQAVFSGSYKW*IPVNCH
Trigger: GTGGCAGTTAACTGGTATGCACCACTTGTAGCTCCC...ACTGAAAACCGCCTGAAACCTGCTGCAACTATTGTTATTAACTCTGTATAGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265000.9
ENST00000505308.5
CDS-3UTR GCA 90 bp AATGGAAGCGTATGTATGGACCCACACATTTATACGAGTTCATGGGGAAGAAAAGGGAGCTACAAGTGGTaGATACCAGTTAACTGCCAC +
Preference number: 4 (lower is better)
Translates to: NGSVCMDPHIYTSSWGRKGSYKW*IPVNCH
Trigger: GTGGCAGTTAACTGGTATGCACCACTTGTAGCTCCC...TTTTCTTCCCCATGAACTCGTATAAATGTGTGGGTCCATACATACGCTTCCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512285.5
CDS-3UTR GCA 90 bp TTGGAAGACTCCTTTGCAATCCTAGAAGTAGGTATGGACAGAGGGCACTGGGAAGTTAATAACAATAGTTaGAGCAGGTTTCAGGCGGTT +
Preference number: 4 (lower is better)
Translates to: LEDSFAILEVGMDRGHWEVNNNS*SRFQAV
Trigger: AACCGCCTGAAACCTGCTGCAACTATTGTTATTAAC...TTCCCAGTGCCCTCTGTCCATACCTACTTCTAGGATTGCAAAGGAGTCTTCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265000.9
CDS-3UTR CCA 90 bp AAGACACAACAGGTTGATAATCACCAAGTTATATATGAAAGTCTGGCTACTCCAGTTACCGAGGATCCCTaGGCGAAGCACAGGATCATG +
Preference number: 4 (lower is better)
Translates to: KTQQVDNHQVIYESLATPVTEDP*AKHRIM
Trigger: CATGATCCTGTGCTTCGCCCAGGGATCCTCGGTAAC...TGGAGTAGCCAGACTTTCATATATAACTTGGTGATTATCAACCTGTTGTGTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265000.9
CDS-3UTR CCA 90 bp TCAAATGGAAGCGTATGTATGGACCCACACATTTATACGAGTTCATGGGGAAGAGAGGCTCAGGTTCTTTaGGTTCAAAGTTACCGAGGA +
Preference number: 4 (lower is better)
Translates to: SNGSVCMDPHIYTSSWGREAQVL*VQSYRG
Trigger: TCCTCGGTAACTTTGAACCCAAAGAACCTGAGCCTC...TCTTCCCCATGAACTCGTATAAATGTGTGGGTCCATACATACGCTTCCATTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512285.5
CDS-3UTR CCA 90 bp GGTTTGGAGCTATACAGAGTTAATAACAATAGTTGCAGCAGGTTTCAGGCGGTTAAGACCCAACATAAATaGGCGGAGGATTTCCTTGCC +
Preference number: 4 (lower is better)
Translates to: GLELYRVNNNSCSRFQAVKTQHK*AEDFLA
Trigger: GGCAAGGAAATCCTCCGCCCATTTATGTTGGGTCTT...AACCGCCTGAAACCTGCTGCAACTATTGTTATTAACTCTGTATAGCTCCAAACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265000.9
ENST00000505308.5
CDS-3UTR TCA 90 bp AATGGAAGCGTATGTATGGACCCACACATTTATACGAGTTCATGGGGAAGAAAAGCAAACTGCGTAAGATaGACCCAATCTTCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: NGSVCMDPHIYTSSWGRKANCVR*TQSSAS
Trigger: TGAGGCTGAAGATTGGGTTCATCTTACGCAGTTTGC...TTTTCTTCCCCATGAACTCGTATAAATGTGTGGGTCCATACATACGCTTCCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512285.5
CDS-3UTR TCA 90 bp TATACAGAGTTAATAACAATAGTTGCAGCAGGTTTCAGGCGGTTTTCAGTCCTGCAGTTTCGAAGCCTCTaGTTTCTCCCCAGTCAACAT +
Preference number: 4 (lower is better)
Translates to: YTELITIVAAGFRRFSVLQFRSL*FLPSQH
Trigger: ATGTTGACTGGGGAGAAATCAGAGGCTTCGAAACTG...CAGGACTGAAAACCGCCTGAAACCTGCTGCAACTATTGTTATTAACTCTGTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265000.9
ENST00000505308.5
CDS-3UTR TCA 90 bp GAGCTATACAGAGTTAATAACAATAGTTGCAGCAGGTTTCAGGCGGTTTTCAGTTTGATTCTGAAAAGCTaGTTCCCTCCCATCCTGTGG +
Preference number: 4 (lower is better)
Translates to: ELYRVNNNSCSRFQAVFSLILKS*FPPILW
Trigger: CCACAGGATGGGAGGGAATCAGCTTTTCAGAATCAA...ACTGAAAACCGCCTGAAACCTGCTGCAACTATTGTTATTAACTCTGTATAGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265000.9
ENST00000505308.5
CDS-3UTR TCA 90 bp TTGGAAGACTCCTTTGCAATCCTAGAAGTAGGTATGGACAGAGGGCACTGGGAATGTAATCATAACTTTTaGTCCATCAGCTCCCTTTGT +
Preference number: 4 (lower is better)
Translates to: LEDSFAILEVGMDRGHWECNHNF*SISSLC
Trigger: ACAAAGGGAGCTGATGGATCAAAAGTTATGATTACA...TTCCCAGTGCCCTCTGTCCATACCTACTTCTAGGATTGCAAAGGAGTCTTCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265000.9
CDS-3UTR TCA 90 bp CCAGGTTTGGAGCTATACAGAGTTAATAACAATAGTTGCAGCAGGTTTCAGGCGAGTCACAATTGGAGATaGATACTTGATGCAGGACCT +
Preference number: 4 (lower is better)
Translates to: PGLELYRVNNNSCSRFQASHNWR*ILDAGP
Trigger: AGGTCCTGCATCAAGTATTCATCTCCAATTGTGACT...CGCCTGAAACCTGCTGCAACTATTGTTATTAACTCTGTATAGCTCCAAACCTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265000.9
ENST00000505308.5
CDS-3UTR GCA 90 bp GCTACACAACTTCCAACCCTATGGGACAGCCTTGGGATGTTCCATATTGTCATTAATGCTGGCTTGAATTaGTTGTTTGAATTCTGGTCC +
Preference number: 4 (lower is better)
Translates to: ATQLPTLWDSLGMFHIVINAGLN*LFEFWS
Trigger: GGACCAGAATTCAAACAAGCAATTCAAGCCAGCATT...AATGACAATATGGAACATCCCAAGGCTGTCCCATAGGGTTGGAAGTTGTGTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265000.9
CDS-3UTR GCA 90 bp CTATACAGAGTTAATAACAATAGTTGCAGCAGGTTTCAGGCGGTTTTCAGTCCTCCATATGGTAATGCCTaGGATTCAGGACGACTAGCA +
Preference number: 4 (lower is better)
Translates to: LYRVNNNSCSRFQAVFSPPYGNA*DSGRLA
Trigger: TGCTAGTCGTCCTGAATCGCAGGCATTACCATATGG...AGGACTGAAAACCGCCTGAAACCTGCTGCAACTATTGTTATTAACTCTGTATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265000.9
ENST00000505308.5
CDS-3UTR CCA 90 bp TATACAGAGTTAATAACAATAGTTGCAGCAGGTTTCAGGCGGTTTTCAGTCCTGGAGGCTCAGGTTCTTTaGGTTCAAAGTTACCGAGGA +
Preference number: 4 (lower is better)
Translates to: YTELITIVAAGFRRFSVLEAQVL*VQSYRG
Trigger: TCCTCGGTAACTTTGAACCCAAAGAACCTGAGCCTC...CAGGACTGAAAACCGCCTGAAACCTGCTGCAACTATTGTTATTAACTCTGTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265000.9
CDS-3UTR CCA 90 bp AATCACAGTTTATCAATGTCCTTCAAACTGATCAGGAGGTTCCAGGTTTGGAGCACTGCCACCTCACAGTaGGCATCAAGGTATATCAAA +
Preference number: 4 (lower is better)
Translates to: NHSLSMSFKLIRRFQVWSTATSQ*ASRYIK
Trigger: TTTGATATACCTTGATGCCCACTGTGAGGTGGCAGT...GCTCCAAACCTGGAACCTCCTGATCAGTTTGAAGGACATTGATAAACTGTGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265000.9
ENST00000505308.5
CDS-3UTR CCA 90 bp TCAAATGGAAGCGTATGTATGGACCCACACATTTATACGAGTTCATGGGGAAGATATGGGAGCTACAAGTaGTGCATACCAGTTAACTGC +
Preference number: 4 (lower is better)
Translates to: SNGSVCMDPHIYTSSWGRYGSYK*CIPVNC
Trigger: GCAGTTAACTGGTATGCACCACTTGTAGCTCCCATA...TCTTCCCCATGAACTCGTATAAATGTGTGGGTCCATACATACGCTTCCATTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512285.5
CDS-3UTR CCA 90 bp GTTCCAGGTTTGGAGCTATACAGAGTTAATAACAATAGTTGCAGCAGGTTTCAGAAGACCCAACATAAATaGGCGGAGGATTTCCTTGCC +
Preference number: 4 (lower is better)
Translates to: VPGLELYRVNNNSCSRFQKTQHK*AEDFLA
Trigger: GGCAAGGAAATCCTCCGCCCATTTATGTTGGGTCTT...CTGAAACCTGCTGCAACTATTGTTATTAACTCTGTATAGCTCCAAACCTGGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265000.9
ENST00000505308.5
CDS-3UTR CCA 90 bp TGGAGCTATACAGAGTTAATAACAATAGTTGCAGCAGGTTTCAGGCGGTTTTCACCCAGTCAACATTTTTaGGTGGCAAAGGGTAGTGTG +
Preference number: 4 (lower is better)
Translates to: WSYTELITIVAAGFRRFSPSQHF*VAKGSV
Trigger: CACACTACCCTTTGCCACCCAAAAATGTTGACTGGG...TGAAAACCGCCTGAAACCTGCTGCAACTATTGTTATTAACTCTGTATAGCTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265000.9
ENST00000505308.5
CDS-3UTR CCA 90 bp GTAAAATCACAGTTTATCAATGTCCTTCAAACTGATCAGGAGGTTCCAGGTTTGCAACTTCCAACCCTATaGGACAGCCTTGGGATGTTC +
Preference number: 4 (lower is better)
Translates to: VKSQFINVLQTDQEVPGLQLPTL*DSLGMF
Trigger: GAACATCCCAAGGCTGTCCCATAGGGTTGGAAGTTG...CAAACCTGGAACCTCCTGATCAGTTTGAAGGACATTGATAAACTGTGATTTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265000.9
CDS-3UTR CCA 90 bp GCTACACAACTTCCAACCCTATGGGACAGCCTTGGGATGTTCCATATTGTCATTAATCTAACAAGGGCTTaGAAAGTCTTACCTCAGTCA +
Preference number: 4 (lower is better)
Translates to: ATQLPTLWDSLGMFHIVINLTRA*KVLPQS
Trigger: TGACTGAGGTAAGACTTTCCAAGCCCTTGTTAGATT...AATGACAATATGGAACATCCCAAGGCTGTCCCATAGGGTTGGAAGTTGTGTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265000.9
CDS-3UTR TCA 90 bp CCAGGTTTGGAGCTATACAGAGTTAATAACAATAGTTGCAGCAGGTTTCAGGCGCTTGAATTGCTTGTTTaGATTCTGGTCCCAAAACCA +
Preference number: 4 (lower is better)
Translates to: PGLELYRVNNNSCSRFQALELLV*ILVPKP
Trigger: TGGTTTTGGGACCAGAATTCAAACAAGCAATTCAAG...CGCCTGAAACCTGCTGCAACTATTGTTATTAACTCTGTATAGCTCCAAACCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265000.9
CDS-3UTR TCA 90 bp CCAGGTTTGGAGCTATACAGAGTTAATAACAATAGTTGCAGCAGGTTTCAGGCGCCAATACTTCGTGCTTaGATTAAACCTTCCCTTCTT +
Preference number: 4 (lower is better)
Translates to: PGLELYRVNNNSCSRFQAPILRA*IKPSLL
Trigger: AAGAAGGGAAGGTTTAATTCAAGCACGAAGTATTGG...CGCCTGAAACCTGCTGCAACTATTGTTATTAACTCTGTATAGCTCCAAACCTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265000.9
ENST00000505308.5
CDS-3UTR TCA 90 bp TATACAGAGTTAATAACAATAGTTGCAGCAGGTTTCAGGCGGTTTTCAGTCCTGCAATGTCCTTCAAACTaGTCAGGAGGTTCCAGGTTT +
Preference number: 4 (lower is better)
Translates to: YTELITIVAAGFRRFSVLQCPSN*SGGSRF
Trigger: AAACCTGGAACCTCCTGATCAGTTTGAAGGACATTG...CAGGACTGAAAACCGCCTGAAACCTGCTGCAACTATTGTTATTAACTCTGTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265000.9
ENST00000505308.5
CDS-3UTR TCA 90 bp GAGCTATACAGAGTTAATAACAATAGTTGCAGCAGGTTTCAGGCGGTTTTCAGTCAATGTCCTTCAAACTaGTCAGGAGGTTCCAGGTTT +
Preference number: 4 (lower is better)
Translates to: ELYRVNNNSCSRFQAVFSQCPSN*SGGSRF
Trigger: AAACCTGGAACCTCCTGATCAGTTTGAAGGACATTG...ACTGAAAACCGCCTGAAACCTGCTGCAACTATTGTTATTAACTCTGTATAGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265000.9
ENST00000505308.5
CDS-3UTR GCA 90 bp GTAAAATCACAGTTTATCAATGTCCTTCAAACTGATCAGGAGGTTCCAGGTTTGTCTCCTCCAGCATGGTaGTCTTGTTCATTTTTGGCC +
Preference number: 4 (lower is better)
Translates to: VKSQFINVLQTDQEVPGLSPPAW*SCSFLA
Trigger: GGCCAAAAATGAACAAGAGCACCATGCTGGAGGAGA...CAAACCTGGAACCTCCTGATCAGTTTGAAGGACATTGATAAACTGTGATTTTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265000.9
CDS-3UTR GCA 90 bp GTAAAATCACAGTTTATCAATGTCCTTCAAACTGATCAGGAGGTTCCAGGTTTGCCATATGGTAATGCCTaGGATTCAGGACGACTAGCA +
Preference number: 4 (lower is better)
Translates to: VKSQFINVLQTDQEVPGLPYGNA*DSGRLA
Trigger: TGCTAGTCGTCCTGAATCGCAGGCATTACCATATGG...CAAACCTGGAACCTCCTGATCAGTTTGAAGGACATTGATAAACTGTGATTTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265000.9
ENST00000505308.5
CDS-3UTR CCA 90 bp GAGCTATACAGAGTTAATAACAATAGTTGCAGCAGGTTTCAGGCGGTTTTCAGTTATGGGAGCTACAAGTaGTGCATACCAGTTAACTGC +
Preference number: 4 (lower is better)
Translates to: ELYRVNNNSCSRFQAVFSYGSYK*CIPVNC
Trigger: GCAGTTAACTGGTATGCACCACTTGTAGCTCCCATA...ACTGAAAACCGCCTGAAACCTGCTGCAACTATTGTTATTAACTCTGTATAGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265000.9
ENST00000505308.5
CDS-3UTR CCA 90 bp TACCCATCTTCATCACCACCCCCTTGGGGTATAATTTCATATGTGTTGCCATTTTCATCACCACCCCCTTaGGGTATAATTTCATATGTG +
Preference number: 4 (lower is better)
Translates to: YPSSSPPPWGIISYVLPFSSPPP*GIISYV
Trigger: CACATATGAAATTATACCCCAAGGGGGTGGTGATGA...AAATGGCAACACATATGAAATTATACCCCAAGGGGGTGGTGATGAAGATGGGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000512285.5
CDS-3UTR CCA 90 bp TGGAGCTATACAGAGTTAATAACAATAGTTGCAGCAGGTTTCAGGCGGTTTTCAAGAACTCTCGTTCAATaGCAAATAATCCCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: WSYTELITIVAAGFRRFSRTLVQ*QIIPQP
Trigger: TGGCTGGGGGATTATTTGCCATTGAACGAGAGTTCT...TGAAAACCGCCTGAAACCTGCTGCAACTATTGTTATTAACTCTGTATAGCTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265000.9
ENST00000505308.5
CDS-3UTR CCA 90 bp TGGAGCTATACAGAGTTAATAACAATAGTTGCAGCAGGTTTCAGGCGGTTTTCACCAAATCTGGAGACCTaGATCATAGAGACCCAATTC +
Preference number: 4 (lower is better)
Translates to: WSYTELITIVAAGFRRFSPNLET*IIETQF
Trigger: GAATTGGGTCTCTATGATCCAGGTCTCCAGATTTGG...TGAAAACCGCCTGAAACCTGCTGCAACTATTGTTATTAACTCTGTATAGCTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265000.9
ENST00000505308.5
CDS-3UTR CCA 90 bp CCAGGTTTGGAGCTATACAGAGTTAATAACAATAGTTGCAGCAGGTTTCAGGCGAGGAGGTTCCAGGTTTaGAGCTATACAGAGTTAATA +
Preference number: 4 (lower is better)
Translates to: PGLELYRVNNNSCSRFQARRFQV*SYTELI
Trigger: TATTAACTCTGTATAGCTCCAAACCTGGAACCTCCT...CGCCTGAAACCTGCTGCAACTATTGTTATTAACTCTGTATAGCTCCAAACCTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265000.9
ENST00000505308.5
CDS-3UTR CCA 90 bp GGTTTGGAGCTATACAGAGTTAATAACAATAGTTGCAGCAGGTTTCAGGCGGTTTTGGCCTTTTCCTTGTaGCTTAGAGGAATACGTTTC +
Preference number: 4 (lower is better)
Translates to: GLELYRVNNNSCSRFQAVLAFSL*LRGIRF
Trigger: GAAACGTATTCCTCTAAGCCACAAGGAAAAGGCCAA...AACCGCCTGAAACCTGCTGCAACTATTGTTATTAACTCTGTATAGCTCCAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505308.5
CDS-3UTR TCA 90 bp AGACACAACAGGTTGATAATCACCAAGTTATATATGAAAGTCTGGCTACTCCAAGCAAACTGCGTAAGATaGACCCAATCTTCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: RHNRLIITKLYMKVWLLQANCVR*TQSSAS
Trigger: TGAGGCTGAAGATTGGGTTCATCTTACGCAGTTTGC...TTGGAGTAGCCAGACTTTCATATATAACTTGGTGATTATCAACCTGTTGTGTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265000.9
CDS-3UTR TCA 90 bp TACCCATCTTCATCACCACCCCCTTGGGGTATAATTTCATATGTGTTGCCATTTCTTGAATTGCTTGTTTaGATTCTGGTCCCAAAACCA +
Preference number: 4 (lower is better)
Translates to: YPSSSPPPWGIISYVLPFLELLV*ILVPKP
Trigger: TGGTTTTGGGACCAGAATTCAAACAAGCAATTCAAG...AAATGGCAACACATATGAAATTATACCCCAAGGGGGTGGTGATGAAGATGGGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000512285.5
CDS-3UTR TCA 90 bp GAGCTATACAGAGTTAATAACAATAGTTGCAGCAGGTTTCAGGCGGTTTTCAGTTGTTCTCATGAGGGTTaGCCATCCTTCATTATGGAA +
Preference number: 4 (lower is better)
Translates to: ELYRVNNNSCSRFQAVFSCSHEG*PSFIME
Trigger: TTCCATAATGAAGGATGGTCAACCCTCATGAGAACA...ACTGAAAACCGCCTGAAACCTGCTGCAACTATTGTTATTAACTCTGTATAGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265000.9
ENST00000505308.5
CDS-3UTR TCA 90 bp CTATACAGAGTTAATAACAATAGTTGCAGCAGGTTTCAGGCGGTTTTCAGTCCTTGTTCTCATGAGGGTTaGCCATCCTTCATTATGGAA +
Preference number: 4 (lower is better)
Translates to: LYRVNNNSCSRFQAVFSPCSHEG*PSFIME
Trigger: TTCCATAATGAAGGATGGTCAACCCTCATGAGAACA...AGGACTGAAAACCGCCTGAAACCTGCTGCAACTATTGTTATTAACTCTGTATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265000.9
ENST00000505308.5
CDS-3UTR TCA 90 bp TGGAGCTATACAGAGTTAATAACAATAGTTGCAGCAGGTTTCAGGCGGTTTTCATGGCAAAGGGTAGTGTaGGGTGATATCATAAGCTAT +
Preference number: 4 (lower is better)
Translates to: WSYTELITIVAAGFRRFSWQRVV*GDIISY
Trigger: ATAGCTTATGATATCACCTCACACTACCCTTTGCCA...TGAAAACCGCCTGAAACCTGCTGCAACTATTGTTATTAACTCTGTATAGCTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265000.9
ENST00000505308.5
CDS-3UTR TCA 90 bp AGACACAACAGGTTGATAATCACCAAGTTATATATGAAAGTCTGGCTACTCCAACAGTTTCGAAGCCTCTaGTTTCTCCCCAGTCAACAT +
Preference number: 4 (lower is better)
Translates to: RHNRLIITKLYMKVWLLQQFRSL*FLPSQH
Trigger: ATGTTGACTGGGGAGAAATCAGAGGCTTCGAAACTG...TTGGAGTAGCCAGACTTTCATATATAACTTGGTGATTATCAACCTGTTGTGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265000.9
CDS-3UTR TCA 90 bp CCAGGTTTGGAGCTATACAGAGTTAATAACAATAGTTGCAGCAGGTTTCAGGCGTCATACTGCATGAGTTaGTTTGCTTCATTGATTCTG +
Preference number: 4 (lower is better)
Translates to: PGLELYRVNNNSCSRFQASYCMS*FASLIL
Trigger: CAGAATCAATGAAGCAAATCAACTCATGCAGTATGA...CGCCTGAAACCTGCTGCAACTATTGTTATTAACTCTGTATAGCTCCAAACCTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265000.9
ENST00000505308.5
CDS-3UTR TCA 90 bp GTTCCAGGTTTGGAGCTATACAGAGTTAATAACAATAGTTGCAGCAGGTTTCAGAGTCACAATTGGAGATaGATACTTGATGCAGGACCT +
Preference number: 4 (lower is better)
Translates to: VPGLELYRVNNNSCSRFQSHNWR*ILDAGP
Trigger: AGGTCCTGCATCAAGTATTCATCTCCAATTGTGACT...CTGAAACCTGCTGCAACTATTGTTATTAACTCTGTATAGCTCCAAACCTGGAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265000.9
ENST00000505308.5
CDS-3UTR GCA 90 bp GAGCTATACAGAGTTAATAACAATAGTTGCAGCAGGTTTCAGGCGGTTTTCAGTGTGAGATACTGCCTCTaGATGATATCTTTCTGGGAA +
Preference number: 4 (lower is better)
Translates to: ELYRVNNNSCSRFQAVFSVRYCL*MISFWE
Trigger: TTCCCAGAAAGATATCATGCAGAGGCAGTATCTCAC...ACTGAAAACCGCCTGAAACCTGCTGCAACTATTGTTATTAACTCTGTATAGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265000.9
CDS-3UTR GCA 90 bp GAGCTATACAGAGTTAATAACAATAGTTGCAGCAGGTTTCAGGCGGTTTTCAGTTTCCCATGCTATCAATaGAGTAAGCAGTTTCGAAGC +
Preference number: 4 (lower is better)
Translates to: ELYRVNNNSCSRFQAVFSFPCYQ*SKQFRS
Trigger: GCTTCGAAACTGCTTACTGCATTGATAGCATGGGAA...ACTGAAAACCGCCTGAAACCTGCTGCAACTATTGTTATTAACTCTGTATAGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265000.9
ENST00000505308.5
CDS-3UTR GCA 90 bp TGGAGCTATACAGAGTTAATAACAATAGTTGCAGCAGGTTTCAGGCGGTTTTCATTCCCATGCTATCAATaGAGTAAGCAGTTTCGAAGC +
Preference number: 4 (lower is better)
Translates to: WSYTELITIVAAGFRRFSFPCYQ*SKQFRS
Trigger: GCTTCGAAACTGCTTACTGCATTGATAGCATGGGAA...TGAAAACCGCCTGAAACCTGCTGCAACTATTGTTATTAACTCTGTATAGCTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265000.9
ENST00000505308.5
CDS-3UTR CCA 90 bp CAAATGGAAGCGTATGTATGGACCCACACATTTATACGAGTTCATGGGGAAGAATGCTTGTTTGAATTCTaGTCCCAAAACCAATGGCTT +
Preference number: 4 (lower is better)
Translates to: QMEAYVWTHTFIRVHGEECLFEF*SQNQWL
Trigger: AAGCCATTGGTTTTGGGACCAGAATTCAAACAAGCA...TTCTTCCCCATGAACTCGTATAAATGTGTGGGTCCATACATACGCTTCCATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512285.5
CDS-3UTR CCA 90 bp TTGCCATTTATGACATCTATAAGCGGCACAGTGCAAATGGTTCTGTATTGTGTTACTGCCACCTCACAGTaGGCATCAAGGTATATCAAA +
Preference number: 4 (lower is better)
Translates to: LPFMTSISGTVQMVLYCVTATSQ*ASRYIK
Trigger: TTTGATATACCTTGATGCCCACTGTGAGGTGGCAGT...AACACAATACAGAACCATTTGCACTGTGCCGCTTATAGATGTCATAAATGGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512285.5
CDS-3UTR CCA 90 bp GTAAAATCACAGTTTATCAATGTCCTTCAAACTGATCAGGAGGTTCCAGGTTTGCCAAATCTGGAGACCTaGATCATAGAGACCCAATTC +
Preference number: 4 (lower is better)
Translates to: VKSQFINVLQTDQEVPGLPNLET*IIETQF
Trigger: GAATTGGGTCTCTATGATCCAGGTCTCCAGATTTGG...CAAACCTGGAACCTCCTGATCAGTTTGAAGGACATTGATAAACTGTGATTTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265000.9
ENST00000505308.5
CDS-3UTR CCA 90 bp AAGACACAACAGGTTGATAATCACCAAGTTATATATGAAAGTCTGGCTACTCCAACATCAGTTCACTCTTaGCTTCACAGGTTGCACAGC +
Preference number: 4 (lower is better)
Translates to: KTQQVDNHQVIYESLATPTSVHS*LHRLHS
Trigger: GCTGTGCAACCTGTGAAGCCAAGAGTGAACTGATGT...TGGAGTAGCCAGACTTTCATATATAACTTGGTGATTATCAACCTGTTGTGTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265000.9
CDS-3UTR CCA 90 bp TTGCCATTTATGACATCTATAAGCGGCACAGTGCAAATGGTTCTGTATTGTGTTGCGGCACAGTGCAAATaGTTCTGTATTGTGTTGATG +
Preference number: 4 (lower is better)
Translates to: LPFMTSISGTVQMVLYCVAAQCK*FCIVLM
Trigger: CATCAACACAATACAGAACCATTTGCACTGTGCCGC...AACACAATACAGAACCATTTGCACTGTGCCGCTTATAGATGTCATAAATGGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512285.5
CDS-3UTR CCA 90 bp TCTATAAGCGGCACAGTGCAAATGGTTCTGTATTGTGTTGATGGCAGCAAAGATATCCCCACCTTGCTGTaGTTCAATGGAATAATCATT +
Preference number: 4 (lower is better)
Translates to: SISGTVQMVLYCVDGSKDIPTLL*FNGIII
Trigger: AATGATTATTCCATTGAACCACAGCAAGGTGGGGAT...ATCTTTGCTGCCATCAACACAATACAGAACCATTTGCACTGTGCCGCTTATAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512285.5
CDS-3UTR CCA 90 bp AATGGAAGCGTATGTATGGACCCACACATTTATACGAGTTCATGGGGAAGAAAATTGGCCTTTTCCTTGTaGCTTAGAGGAATACGTTTC +
Preference number: 4 (lower is better)
Translates to: NGSVCMDPHIYTSSWGRKLAFSL*LRGIRF
Trigger: GAAACGTATTCCTCTAAGCCACAAGGAAAAGGCCAA...TTTTCTTCCCCATGAACTCGTATAAATGTGTGGGTCCATACATACGCTTCCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000512285.5
CDS-3UTR TCA 90 bp TTGCCATTTATGACATCTATAAGCGGCACAGTGCAAATGGTTCTGTATTGTGTTTGTTCTCATGAGGGTTaGCCATCCTTCATTATGGAA +
Preference number: 4 (lower is better)
Translates to: LPFMTSISGTVQMVLYCVCSHEG*PSFIME
Trigger: TTCCATAATGAAGGATGGTCAACCCTCATGAGAACA...AACACAATACAGAACCATTTGCACTGTGCCGCTTATAGATGTCATAAATGGCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512285.5
CDS-3UTR TCA 90 bp TGGAGCTATACAGAGTTAATAACAATAGTTGCAGCAGGTTTCAGGCGGTTTTCACCAATACTTCGTGCTTaGATTAAACCTTCCCTTCTT +
Preference number: 4 (lower is better)
Translates to: WSYTELITIVAAGFRRFSPILRA*IKPSLL
Trigger: AAGAAGGGAAGGTTTAATTCAAGCACGAAGTATTGG...TGAAAACCGCCTGAAACCTGCTGCAACTATTGTTATTAACTCTGTATAGCTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265000.9
ENST00000505308.5
CDS-3UTR TCA 90 bp GAGCTATACAGAGTTAATAACAATAGTTGCAGCAGGTTTCAGGCGGTTTTCAGTCTGCCATATCTTGTATaGGATCTCAAAGTTTTCACC +
Preference number: 4 (lower is better)
Translates to: ELYRVNNNSCSRFQAVFSLPYLV*DLKVFT
Trigger: GGTGAAAACTTTGAGATCTCATACAAGATATGGCAG...ACTGAAAACCGCCTGAAACCTGCTGCAACTATTGTTATTAACTCTGTATAGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265000.9
ENST00000505308.5
CDS-3UTR TCA 90 bp AATCACAGTTTATCAATGTCCTTCAAACTGATCAGGAGGTTCCAGGTTTGGAGCTCATACTGCATGAGTTaGTTTGCTTCATTGATTCTG +
Preference number: 4 (lower is better)
Translates to: NHSLSMSFKLIRRFQVWSSYCMS*FASLIL
Trigger: CAGAATCAATGAAGCAAATCAACTCATGCAGTATGA...GCTCCAAACCTGGAACCTCCTGATCAGTTTGAAGGACATTGATAAACTGTGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265000.9
ENST00000505308.5
CDS-3UTR TCA 90 bp AATCACAGTTTATCAATGTCCTTCAAACTGATCAGGAGGTTCCAGGTTTGGAGCTGTAATCATAACTTTTaGTCCATCAGCTCCCTTTGT +
Preference number: 4 (lower is better)
Translates to: NHSLSMSFKLIRRFQVWSCNHNF*SISSLC
Trigger: ACAAAGGGAGCTGATGGATCAAAAGTTATGATTACA...GCTCCAAACCTGGAACCTCCTGATCAGTTTGAAGGACATTGATAAACTGTGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265000.9
ENST00000505308.5
CDS-3UTR TCA 90 bp CTATACAGAGTTAATAACAATAGTTGCAGCAGGTTTCAGGCGGTTTTCAGTCCTTTTCCTGAAGGAATATaGGTAAATCTGTGCAGGTTC +
Preference number: 4 (lower is better)
Translates to: LYRVNNNSCSRFQAVFSPFPEGI*VNLCRF
Trigger: GAACCTGCACAGATTTACTCATATTCCTTCAGGAAA...AGGACTGAAAACCGCCTGAAACCTGCTGCAACTATTGTTATTAACTCTGTATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265000.9
ENST00000505308.5
CDS-3UTR TCA 90 bp GGTTTGGAGCTATACAGAGTTAATAACAATAGTTGCAGCAGGTTTCAGGCGGTTTTCATTTCCCATTTTTaGGTCGTTTTACTGGAGTCA +
Preference number: 4 (lower is better)
Translates to: GLELYRVNNNSCSRFQAVFISHF*VVLLES
Trigger: TGACTCCAGTAAAACGACTCAAAAATGGGAAATGAA...AACCGCCTGAAACCTGCTGCAACTATTGTTATTAACTCTGTATAGCTCCAAACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265000.9
ENST00000505308.5
CDS-3UTR TCA 90 bp AATCACAGTTTATCAATGTCCTTCAAACTGATCAGGAGGTTCCAGGTTTGGAGCGTCAGAATGAACCTTTaGTGTGTTTATAACGGTGTT +
Preference number: 4 (lower is better)
Translates to: NHSLSMSFKLIRRFQVWSVRMNL*CVYNGV
Trigger: AACACCGTTATAAACACATCAAAGGTTCATTCTGAC...GCTCCAAACCTGGAACCTCCTGATCAGTTTGAAGGACATTGATAAACTGTGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265000.9
CDS-3UTR TCA 90 bp AAAGATCAAATGGAAGCGTATGTATGGACCCACACATTTATACGAGTTCATGGGGGTTCTGTATTGTGTTaGTGGCAGCAAAGATCAAAT +
Preference number: 4 (lower is better)
Translates to: KDQMEAYVWTHTFIRVHGGSVLC*WQQRSN
Trigger: ATTTGATCTTTGCTGCCATCAACACAATACAGAACC...CCCATGAACTCGTATAAATGTGTGGGTCCATACATACGCTTCCATTTGATCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512285.5
CDS-3UTR GCA 90 bp CTATACAGAGTTAATAACAATAGTTGCAGCAGGTTTCAGGCGGTTTTCAGTCCTAATTTGCCACCACACTaGCATATCTTGTATGAGATC +
Preference number: 4 (lower is better)
Translates to: LYRVNNNSCSRFQAVFSPNLPPH*HILYEI
Trigger: GATCTCATACAAGATATGGCAGTGTGGTGGCAAATT...AGGACTGAAAACCGCCTGAAACCTGCTGCAACTATTGTTATTAACTCTGTATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265000.9
ENST00000505308.5
CDS-3UTR GCA 90 bp CTATACAGAGTTAATAACAATAGTTGCAGCAGGTTTCAGGCGGTTTTCAGTCCTGTTAATAACAATAGTTaGAGCAGGTTTCAGGCGGTT +
Preference number: 4 (lower is better)
Translates to: LYRVNNNSCSRFQAVFSPVNNNS*SRFQAV
Trigger: AACCGCCTGAAACCTGCTGCAACTATTGTTATTAAC...AGGACTGAAAACCGCCTGAAACCTGCTGCAACTATTGTTATTAACTCTGTATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265000.9
ENST00000505308.5
CDS-3UTR GCA 90 bp TATACAGAGTTAATAACAATAGTTGCAGCAGGTTTCAGGCGGTTTTCAGTCCTGACTTACTTGCCATTCTaGTCACATCATCACAGTTGT +
Preference number: 4 (lower is better)
Translates to: YTELITIVAAGFRRFSVLTYLPF*SHHHSC
Trigger: ACAACTGTGATGATGTGAGCAGAATGGCAAGTAAGT...CAGGACTGAAAACCGCCTGAAACCTGCTGCAACTATTGTTATTAACTCTGTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265000.9
CDS-3UTR CCA 90 bp AAGACACAACAGGTTGATAATCACCAAGTTATATATGAAAGTCTGGCTACTCCATGCATGATATCTTTCTaGGAATCTCCTCCAGCATGG +
Preference number: 4 (lower is better)
Translates to: KTQQVDNHQVIYESLATPCMISF*ESPPAW
Trigger: CCATGCTGGAGGAGATTCCCAGAAAGATATCATGCA...TGGAGTAGCCAGACTTTCATATATAACTTGGTGATTATCAACCTGTTGTGTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265000.9
CDS-3UTR CCA 90 bp GTAAAATCACAGTTTATCAATGTCCTTCAAACTGATCAGGAGGTTCCAGGTTTGTACTTGCATTCTTCTTaGCGTAAGTCATTGACGCTG +
Preference number: 4 (lower is better)
Translates to: VKSQFINVLQTDQEVPGLYLHSS*RKSLTL
Trigger: CAGCGTCAATGACTTACGCCAAGAAGAATGCAAGTA...CAAACCTGGAACCTCCTGATCAGTTTGAAGGACATTGATAAACTGTGATTTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265000.9
CDS-3UTR CCA 90 bp AAGACACAACAGGTTGATAATCACCAAGTTATATATGAAAGTCTGGCTACTCCAACTGCCACCTCACAGTaGGCATCAAGGTATATCAAA +
Preference number: 4 (lower is better)
Translates to: KTQQVDNHQVIYESLATPTATSQ*ASRYIK
Trigger: TTTGATATACCTTGATGCCCACTGTGAGGTGGCAGT...TGGAGTAGCCAGACTTTCATATATAACTTGGTGATTATCAACCTGTTGTGTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265000.9
CDS-3UTR CCA 90 bp AGACACAACAGGTTGATAATCACCAAGTTATATATGAAAGTCTGGCTACTCCAATATGGGAGCTACAAGTaGTGCATACCAGTTAACTGC +
Preference number: 4 (lower is better)
Translates to: RHNRLIITKLYMKVWLLQYGSYK*CIPVNC
Trigger: GCAGTTAACTGGTATGCACCACTTGTAGCTCCCATA...TTGGAGTAGCCAGACTTTCATATATAACTTGGTGATTATCAACCTGTTGTGTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265000.9
CDS-3UTR CCA 90 bp AGACACAACAGGTTGATAATCACCAAGTTATATATGAAAGTCTGGCTACTCCAAAGAACTCTCGTTCAATaGCAAATAATCCCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: RHNRLIITKLYMKVWLLQRTLVQ*QIIPQP
Trigger: TGGCTGGGGGATTATTTGCCATTGAACGAGAGTTCT...TTGGAGTAGCCAGACTTTCATATATAACTTGGTGATTATCAACCTGTTGTGTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265000.9
CDS-3UTR CCA 90 bp AATCACAGTTTATCAATGTCCTTCAAACTGATCAGGAGGTTCCAGGTTTGGAGCACTCAACATGGAAAATaGAGCCTATTTGCAAACACA +
Preference number: 4 (lower is better)
Translates to: NHSLSMSFKLIRRFQVWSTQHGK*SLFANT
Trigger: TGTGTTTGCAAATAGGCTCCATTTTCCATGTTGAGT...GCTCCAAACCTGGAACCTCCTGATCAGTTTGAAGGACATTGATAAACTGTGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265000.9
CDS-3UTR CCA 90 bp CCAGGTTTGGAGCTATACAGAGTTAATAACAATAGTTGCAGCAGGTTTCAGGCGATAATCTACTCAACATaGAAAATGGAGCCTATTTGC +
Preference number: 4 (lower is better)
Translates to: PGLELYRVNNNSCSRFQAIIYST*KMEPIC
Trigger: GCAAATAGGCTCCATTTTCCATGTTGAGTAGATTAT...CGCCTGAAACCTGCTGCAACTATTGTTATTAACTCTGTATAGCTCCAAACCTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265000.9
3UTR CAA 72 bp ATCAATGTCCTTCAAACTGATCAGGAGGTTCCAGGTTaGGAGCTATACAGAGTTAATAACAATAGTTGCAGC +
Preference number: 4 (lower is better)
Translates to: INVLQTDQEVPG*ELYRVNNNSCS
Trigger: GCTGCAACTATTGTTATTAACTCTGTATAGCTCCAAACCTGGAACCTCCTGATCAGTTTGAAGGACATTGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265000.9
ENST00000505308.5
CDS-3UTR TCA 90 bp TGGAGCTATACAGAGTTAATAACAATAGTTGCAGCAGGTTTCAGGCGGTTTTCAAAGGGTAGTGTGAGGTaGTATCATAAGCTATTTCTT +
Preference number: 4 (lower is better)
Translates to: WSYTELITIVAAGFRRFSKGSVR*YHKLFL
Trigger: AAGAAATAGCTTATGATATCACCTCACACTACCCTT...TGAAAACCGCCTGAAACCTGCTGCAACTATTGTTATTAACTCTGTATAGCTCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265000.9
ENST00000505308.5
CDS-3UTR TCA 90 bp TATACAGAGTTAATAACAATAGTTGCAGCAGGTTTCAGGCGGTTTTCAGTCCTGTTCATTTCCCATTTTTaGGTCGTTTTACTGGAGTCA +
Preference number: 4 (lower is better)
Translates to: YTELITIVAAGFRRFSVLFISHF*VVLLES
Trigger: TGACTCCAGTAAAACGACTCAAAAATGGGAAATGAA...CAGGACTGAAAACCGCCTGAAACCTGCTGCAACTATTGTTATTAACTCTGTATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265000.9
ENST00000505308.5
CDS-3UTR TCA 90 bp AGACACAACAGGTTGATAATCACCAAGTTATATATGAAAGTCTGGCTACTCCAATATTCCCCATACAGGTaGCAAGTCCATCATTACCAT +
Preference number: 4 (lower is better)
Translates to: RHNRLIITKLYMKVWLLQYSPYR*QVHHYH
Trigger: ATGGTAATGATGGACTTGTCACCTGTATGGGGAATA...TTGGAGTAGCCAGACTTTCATATATAACTTGGTGATTATCAACCTGTTGTGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265000.9
CDS-3UTR GCA 90 bp AATCACAGTTTATCAATGTCCTTCAAACTGATCAGGAGGTTCCAGGTTTGGAGCTTAAATGTGAGATACTaGCTCTGCATGATATCTTTC +
Preference number: 4 (lower is better)
Translates to: NHSLSMSFKLIRRFQVWSLNVRY*LCMISF
Trigger: GAAAGATATCATGCAGAGGCAGTATCTCACATTTAA...GCTCCAAACCTGGAACCTCCTGATCAGTTTGAAGGACATTGATAAACTGTGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265000.9
CDS-3UTR GCA 90 bp TGGAGCTATACAGAGTTAATAACAATAGTTGCAGCAGGTTTCAGGCGGTTTTCACATTTGTTTTTCCCATaGTATCAATGCAGTAAGCAG +
Preference number: 4 (lower is better)
Translates to: WSYTELITIVAAGFRRFSHLFFP*YQCSKQ
Trigger: CTGCTTACTGCATTGATAGCATGGGAAAAACAAATG...TGAAAACCGCCTGAAACCTGCTGCAACTATTGTTATTAACTCTGTATAGCTCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265000.9
ENST00000505308.5
CDS-3UTR CCA 90 bp AGACACAACAGGTTGATAATCACCAAGTTATATATGAAAGTCTGGCTACTCCAATCATCACCACCCCCTTaGGGTATAATTTCATATGTG +
Preference number: 4 (lower is better)
Translates to: RHNRLIITKLYMKVWLLQSSPPP*GIISYV
Trigger: CACATATGAAATTATACCCCAAGGGGGTGGTGATGA...TTGGAGTAGCCAGACTTTCATATATAACTTGGTGATTATCAACCTGTTGTGTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265000.9
CDS-3UTR CCA 90 bp GTAAAATCACAGTTTATCAATGTCCTTCAAACTGATCAGGAGGTTCCAGGTTTGATCCCCACCTTGCTGTaGTTCAATGGAATAATCATT +
Preference number: 4 (lower is better)
Translates to: VKSQFINVLQTDQEVPGLIPTLL*FNGIII
Trigger: AATGATTATTCCATTGAACCACAGCAAGGTGGGGAT...CAAACCTGGAACCTCCTGATCAGTTTGAAGGACATTGATAAACTGTGATTTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505308.5
CDS-3UTR TCA 90 bp AGACACAACAGGTTGATAATCACCAAGTTATATATGAAAGTCTGGCTACTCCAACTGCCATATCTTGTATaGGATCTCAAAGTTTTCACC +
Preference number: 4 (lower is better)
Translates to: RHNRLIITKLYMKVWLLQLPYLV*DLKVFT
Trigger: GGTGAAAACTTTGAGATCTCATACAAGATATGGCAG...TTGGAGTAGCCAGACTTTCATATATAACTTGGTGATTATCAACCTGTTGTGTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265000.9
CDS-3UTR GCA 90 bp AGACACAACAGGTTGATAATCACCAAGTTATATATGAAAGTCTGGCTACTCCAAAATTTGCCACCACACTaGCATATCTTGTATGAGATC +
Preference number: 4 (lower is better)
Translates to: RHNRLIITKLYMKVWLLQNLPPH*HILYEI
Trigger: GATCTCATACAAGATATGGCAGTGTGGTGGCAAATT...TTGGAGTAGCCAGACTTTCATATATAACTTGGTGATTATCAACCTGTTGTGTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265000.9
CDS-3UTR GCA 90 bp GAGCTATACAGAGTTAATAACAATAGTTGCAGCAGGTTTCAGGCGGTTTTCAGTGAACAAATAATAATTTaGCACCACACTGCCATATCT +
Preference number: 4 (lower is better)
Translates to: ELYRVNNNSCSRFQAVFSEQIII*HHTAIS
Trigger: AGATATGGCAGTGTGGTGGCAAATTATTATTTGTTC...ACTGAAAACCGCCTGAAACCTGCTGCAACTATTGTTATTAACTCTGTATAGCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265000.9
ENST00000505308.5
CDS-3UTR CCA 90 bp AAGACACAACAGGTTGATAATCACCAAGTTATATATGAAAGTCTGGCTACTCCATGCTTGTTTGAATTCTaGTCCCAAAACCAATGGCTT +
Preference number: 4 (lower is better)
Translates to: KTQQVDNHQVIYESLATPCLFEF*SQNQWL
Trigger: AAGCCATTGGTTTTGGGACCAGAATTCAAACAAGCA...TGGAGTAGCCAGACTTTCATATATAACTTGGTGATTATCAACCTGTTGTGTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265000.9
CDS-3UTR CCA 90 bp AGACACAACAGGTTGATAATCACCAAGTTATATATGAAAGTCTGGCTACTCCAAAGGAGGTTCCAGGTTTaGAGCTATACAGAGTTAATA +
Preference number: 4 (lower is better)
Translates to: RHNRLIITKLYMKVWLLQRRFQV*SYTELI
Trigger: TATTAACTCTGTATAGCTCCAAACCTGGAACCTCCT...TTGGAGTAGCCAGACTTTCATATATAACTTGGTGATTATCAACCTGTTGTGTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265000.9
CDS-3UTR CCA 90 bp TATACAGAGTTAATAACAATAGTTGCAGCAGGTTTCAGGCGGTTTTCAGTCCTGTGTATTGGCAGGTATTaGAGAAAAGTAAATCCCAAA +
Preference number: 4 (lower is better)
Translates to: YTELITIVAAGFRRFSVLCIGRY*RKVNPK
Trigger: TTTGGGATTTACTTTTCTCCAATACCTGCCAATACA...CAGGACTGAAAACCGCCTGAAACCTGCTGCAACTATTGTTATTAACTCTGTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265000.9
CDS-3UTR GCA 90 bp GTAAAATCACAGTTTATCAATGTCCTTCAAACTGATCAGGAGGTTCCAGGTTTGGAACAAATAATAATTTaGCACCACACTGCCATATCT +
Preference number: 4 (lower is better)
Translates to: VKSQFINVLQTDQEVPGLEQIII*HHTAIS
Trigger: AGATATGGCAGTGTGGTGGCAAATTATTATTTGTTC...CAAACCTGGAACCTCCTGATCAGTTTGAAGGACATTGATAAACTGTGATTTTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265000.9
ENST00000505308.5
CDS-3UTR GCA 90 bp AGACACAACAGGTTGATAATCACCAAGTTATATATGAAAGTCTGGCTACTCCAACATTTGTTTTTCCCATaGTATCAATGCAGTAAGCAG +
Preference number: 4 (lower is better)
Translates to: RHNRLIITKLYMKVWLLQHLFFP*YQCSKQ
Trigger: CTGCTTACTGCATTGATAGCATGGGAAAAACAAATG...TTGGAGTAGCCAGACTTTCATATATAACTTGGTGATTATCAACCTGTTGTGTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265000.9
CDS TCA 90 bp CTGGCAGAGGGAACAGCACAGGCAGGCACATGCCTGGAGGGAGTCTaGGGACCAGTAAGGACATGGGGCTGGAGTGGAGTGGGGAGAGCA +
Preference number: 5 (lower is better)
Translates to: LAEGTAQAGTCLEGV*GPVRTWGWSGVGRA
Trigger: TGCTCTCCCCACTCCACTCCAGCCCCATGTCCTTACTGGTCCTCAGACTCCCTCCAGGCATGTGCCTGCCTGTGCTGTTCCCTCTGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515862.1
CDS TCA 90 bp CCACTAGCCCCAGGAAGCTTCCCACCACCAGCAAACTGCGTAAGATaGACCCAATCTTCAGCCTCATCTTCCTCCGGCGGCGAGAGACTC +
Preference number: 5 (lower is better)
Translates to: PLAPGSFPPPANCVR*TQSSASSSSGGERL
Trigger: GAGTCTCTCGCCGCCGGAGGAAGATGAGGCTGAAGATTGGGTTCATCTTACGCAGTTTGCTGGTGGTGGGAAGCTTCCTGGGGCTAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265000.9
ENST00000512285.5
CDS-3UTR CAA 90 bp ATCAAATGGAAGCGTATGTATGGACCCACACATTTATACGAGTTCATGGGGAAGTCCTGCTCAGCGGGCTaGGGTCGTCCGGCCGCGGGG +
Preference number: 5 (lower is better)
Translates to: IKWKRMYGPTHLYEFMGKSCSAG*GRPAAG
Trigger: CCCCGCGGCCGGACGACCCAAGCCCGCTGAGCAGGA...CTTCCCCATGAACTCGTATAAATGTGTGGGTCCATACATACGCTTCCATTTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512285.5
CDS CCA 90 bp CTTTCTCTCCAGGGCCACCAACCACTCCAGGAGGCTCAGGTTCTTTaGGTTCAAAGTTACCGAGGATCCCTGGGCGAAGCACAGGATCAT +
Preference number: 5 (lower is better)
Translates to: LSLQGHQPLQEAQVL*VQSYRGSLGEAQDH
Trigger: ATGATCCTGTGCTTCGCCCAGGGATCCTCGGTAACTTTGAACCCAAAGAACCTGAGCCTCCTGGAGTGGTTGGTGGCCCTGGAGAGAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265000.9
ENST00000512285.5
CDS-3UTR CAA 90 bp GTTCCAGGTTTGGAGCTATACAGAGTTAATAACAATAGTTGCAGCAGGTTTCAGTCCTGCTCAGCGGGCTaGGGTCGTCCGGCCGCGGGG +
Preference number: 5 (lower is better)
Translates to: VPGLELYRVNNNSCSRFQSCSAG*GRPAAG
Trigger: CCCCGCGGCCGGACGACCCAAGCCCGCTGAGCAGGA...CTGAAACCTGCTGCAACTATTGTTATTAACTCTGTATAGCTCCAAACCTGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265000.9
CDS TCA 90 bp AGTCCACTTCTACTCCTTCAACATGAGGCCATGGTACCACAGGTTTaGATCTGTCCTCCCCAGGAGCTAGTCCATTGCCGCCTCGGTTGG +
Preference number: 5 (lower is better)
Translates to: SPLLLLQHEAMVPQV*ICPPQELVHCRLGW
Trigger: CCAACCGAGGCGGCAATGGACTAGCTCCTGGGGAGGACAGATTCAAACCTGTGGTACCATGGCCTCATGTTGAAGGAGTAGAAGTGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265000.9
ENST00000512285.5
CDS-3UTR CAA 90 bp CCCGTTTCCAGAGCATACTCCAATCCCATGCTCCTCGGGCATACCCATCTTCATTCTTGGCGTAAGTCATaGACGCTGCGGTCCAGTGAG +
Preference number: 5 (lower is better)
Translates to: PVSRAYSNPMLLGHTHLHSWRKS*TLRSSE
Trigger: CTCACTGGACCGCAGCGTCAATGACTTACGCCAAGA...ATGAAGATGGGTATGCCCGAGGAGCATGGGATTGGAGTATGCTCTGGAAACGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512285.5
CDS CCA 90 bp TGGAGTGGAGTGGGGAGAGCAGTAGCAGGTGAGGCCAGAGAGGAATaGGGACAGATGTTGTGGATCTTGGAGACTACCAGAAAGGACTTT +
Preference number: 5 (lower is better)
Translates to: WSGVGRAVAGEAREE*GQMLWILETTRKDF
Trigger: AAAGTCCTTTCTGGTAGTCTCCAAGATCCACAACATCTGTCCCCATTCCTCTCTGGCCTCACCTGCTACTGCTCTCCCCACTCCACTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515862.1
CDS-3UTR CAA 90 bp TTGGAAGACTCCTTTGCAATCCTAGAAGTAGGTATGGACAGAGGGCACTGGGAACCATTGCCGCCTCGGTaGGGCATGGGGTCATTGACA +
Preference number: 5 (lower is better)
Translates to: LEDSFAILEVGMDRGHWEPLPPR*GMGSLT
Trigger: TGTCAATGACCCCATGCCCAACCGAGGCGGCAATGG...TTCCCAGTGCCCTCTGTCCATACCTACTTCTAGGATTGCAAAGGAGTCTTCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265000.9
CDS-3UTR CAA 90 bp CCCGTTTCCAGAGCATACTCCAATCCCATGCTCCTCGGGCATACCCATCTTCATCATGGTACCACAGGTTaGAATCTGTCCTCCCCAGGA +
Preference number: 5 (lower is better)
Translates to: PVSRAYSNPMLLGHTHLHHGTTG*NLSSPG
Trigger: TCCTGGGGAGGACAGATTCAAACCTGTGGTACCATG...ATGAAGATGGGTATGCCCGAGGAGCATGGGATTGGAGTATGCTCTGGAAACGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512285.5
CDS GCA 90 bp AGTCAGGACAGAGGTGTGAATGTACAGAGGAAGAGCTGCTCACCCTaGCTGGAGGAGCTCCAAAGACTGCCCCAAGAGACACCTTTAAAA +
Preference number: 5 (lower is better)
Translates to: SQDRGVNVQRKSCSP*LEELQRLPQETPLK
Trigger: TTTTAAAGGTGTCTCTTGGGGCAGTCTTTGGAGCTCCTCCAGGCAGGGTGAGCAGCTCTTCCTCTGTACATTCACACCTCTGTCCTGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515862.1
CDS-3UTR CAA 90 bp AGGCACCCGTTTCCAGAGCATACTCCAATCCCATGCTCCTCGGGCATACCCATCTCCAGCATGGTGCTCTaGTTCATTTTTGGCCTTGTT +
Preference number: 5 (lower is better)
Translates to: RHPFPEHTPIPCSSGIPISSMVL*FIFGLV
Trigger: AACAAGGCCAAAAATGAACAAGAGCACCATGCTGGA...GATGGGTATGCCCGAGGAGCATGGGATTGGAGTATGCTCTGGAAACGGGTGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512285.5
CDS CCA 90 bp TCCAGGAGGCTCAGGTTCTTTGGGTTCAAAGTTACCGAGGATCCCTaGGCGAAGCACAGGATCATGGTAGGTGAATGTCTGAGGCTTAAA +
Preference number: 5 (lower is better)
Translates to: SRRLRFFGFKVTEDP*AKHRIMVGECLRLK
Trigger: TTTAAGCCTCAGACATTCACCTACCATGATCCTGTGCTTCGCCCAGGGATCCTCGGTAACTTTGAACCCAAAGAACCTGAGCCTCCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265000.9
ENST00000512285.5
CDS-3UTR CAA 90 bp AATCACAGTTTATCAATGTCCTTCAAACTGATCAGGAGGTTCCAGGTTTGGAGCCCAGGAGCTAGTCCATaGCCGCCTCGGTTGGGCATG +
Preference number: 5 (lower is better)
Translates to: NHSLSMSFKLIRRFQVWSPGASP*PPRLGM
Trigger: CATGCCCAACCGAGGCGGCAATGGACTAGCTCCTGG...GCTCCAAACCTGGAACCTCCTGATCAGTTTGAAGGACATTGATAAACTGTGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265000.9
CDS-3UTR CAA 90 bp GCTACACAACTTCCAACCCTATGGGACAGCCTTGGGATGTTCCATATTGTCATTTCTCAGTCTCTTCTCTaGAGGGGTCAGAGGCACCCG +
Preference number: 5 (lower is better)
Translates to: ATQLPTLWDSLGMFHIVISQSLL*RGQRHP
Trigger: CGGGTGCCTCTGACCCCTCAAGAGAAGAGACTGAGA...AATGACAATATGGAACATCCCAAGGCTGTCCCATAGGGTTGGAAGTTGTGTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265000.9
CDS CCA 90 bp CGGCACAGTGCAAATGGTTCTGTCCTTAGATATGGGAGCTACAAGTaGTGCATACCAGTTAACTGCCACCTCACAGTGGGCATCAAGGTA +
Preference number: 5 (lower is better)
Translates to: RHSANGSVLRYGSYK*CIPVNCHLTVGIKV
Trigger: TACCTTGATGCCCACTGTGAGGTGGCAGTTAACTGGTATGCACCACTTGTAGCTCCCATATCTAAGGACAGAACCATTTGCACTGTGCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265000.9
CDS-3UTR CAA 90 bp TCTATAAGCGGCACAGTGCAAATGGTTCTGTATTGTGTTGATGGCAGCAAAGATCCATTGCCGCCTCGGTaGGGCATGGGGTCATTGACA +
Preference number: 5 (lower is better)
Translates to: SISGTVQMVLYCVDGSKDPLPPR*GMGSLT
Trigger: TGTCAATGACCCCATGCCCAACCGAGGCGGCAATGG...ATCTTTGCTGCCATCAACACAATACAGAACCATTTGCACTGTGCCGCTTATAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512285.5
CDS CCA 90 bp CCTATAATGATAACAGGTTTTGAGGATATGAAGAGGTGCAAGTCATaGTCCTCACCGCCTGTAGAGAGACAGAGGGGTAGTGGACCAGTC +
Preference number: 5 (lower is better)
Translates to: PIMITGFEDMKRCKS*SSPPVERQRGSGPV
Trigger: GACTGGTCCACTACCCCTCTGTCTCTCTACAGGCGGTGAGGACCATGACTTGCACCTCTTCATATCCTCAAAACCTGTTATCATTATAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515862.1
CDS GCA 90 bp GACTGTGCACCTATAATGATAACAGGTTTTGAGGATATGAAGAGGTaGAAGTCATGGTCCTCACCGCCTGTAGAGAGACAGAGGGGTAGT +
Preference number: 5 (lower is better)
Translates to: DCAPIMITGFEDMKR*KSWSSPPVERQRGS
Trigger: ACTACCCCTCTGTCTCTCTACAGGCGGTGAGGACCATGACTTGCACCTCTTCATATCCTCAAAACCTGTTATCATTATAGGTGCACAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515862.1
CDS CCA 90 bp AGGCACAGTACATGTAGTTCTGTCCTTAGATATGGGAGCTACAAGTaGTGCATACCAGTTAACTGCCACCTCACAGTGGGCATCAAGGTA +
Preference number: 5 (lower is better)
Translates to: RHSTCSSVLRYGSYK*CIPVNCHLTVGIKV
Trigger: TACCTTGATGCCCACTGTGAGGTGGCAGTTAACTGGTATGCACCACTTGTAGCTCCCATATCTAAGGACAGAACTACATGTACTGTGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505308.5
ENST00000512285.5
CDS-3UTR CAA 90 bp AATCACAGTTTATCAATGTCCTTCAAACTGATCAGGAGGTTCCAGGTTTGGAGCTCTTGGCGTAAGTCATaGACGCTGCGGTCCAGTGAG +
Preference number: 5 (lower is better)
Translates to: NHSLSMSFKLIRRFQVWSSWRKS*TLRSSE
Trigger: CTCACTGGACCGCAGCGTCAATGACTTACGCCAAGA...GCTCCAAACCTGGAACCTCCTGATCAGTTTGAAGGACATTGATAAACTGTGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265000.9
CDS-3UTR CAA 90 bp TCATATGTGTTGCCATTTATGACATCTATAAGCGGCACAGTGCAAATGGTTCTGTCTCAGTCTCTTCTCTaGAGGGGTCAGAGGCACCCG +
Preference number: 5 (lower is better)
Translates to: SYVLPFMTSISGTVQMVLSQSLL*RGQRHP
Trigger: CGGGTGCCTCTGACCCCTCAAGAGAAGAGACTGAGA...CAGAACCATTTGCACTGTGCCGCTTATAGATGTCATAAATGGCAACACATATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512285.5
CDS GCA 90 bp TCTGTCCTTAGATATGGGAGCTACAAGTGGTGCATACCAGTTAACTaGCACCTCACAGTGGGCATCAAGGTATATCAAAACCTGTCCAAG +
Preference number: 5 (lower is better)
Translates to: SVLRYGSYKWCIPVN*HLTVGIKVYQNLSK
Trigger: CTTGGACAGGTTTTGATATACCTTGATGCCCACTGTGAGGTGGCAGTTAACTGGTATGCACCACTTGTAGCTCCCATATCTAAGGACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265000.9
ENST00000505308.5
ENST00000512285.5
CDS GCA 90 bp CACAGTGCAAATGGTTCTGTCCTTAGATATGGGAGCTACAAGTGGTaGATACCAGTTAACTGCCACCTCACAGTGGGCATCAAGGTATAT +
Preference number: 5 (lower is better)
Translates to: HSANGSVLRYGSYKW*IPVNCHLTVGIKVY
Trigger: ATATACCTTGATGCCCACTGTGAGGTGGCAGTTAACTGGTATGCACCACTTGTAGCTCCCATATCTAAGGACAGAACCATTTGCACTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265000.9
CDS-3UTR CAA 90 bp GGTTTGGAGCTATACAGAGTTAATAACAATAGTTGCAGCAGGTTTCAGGCGGTTCATGGTACCACAGGTTaGAATCTGTCCTCCCCAGGA +
Preference number: 5 (lower is better)
Translates to: GLELYRVNNNSCSRFQAVHGTTG*NLSSPG
Trigger: TCCTGGGGAGGACAGATTCAAACCTGTGGTACCATG...AACCGCCTGAAACCTGCTGCAACTATTGTTATTAACTCTGTATAGCTCCAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265000.9
CDS-3UTR CAA 90 bp TTGGAAGACTCCTTTGCAATCCTAGAAGTAGGTATGGACAGAGGGCACTGGGAATCCAGCATGGTGCTCTaGTTCATTTTTGGCCTTGTT +
Preference number: 5 (lower is better)
Translates to: LEDSFAILEVGMDRGHWESSMVL*FIFGLV
Trigger: AACAAGGCCAAAAATGAACAAGAGCACCATGCTGGA...TTCCCAGTGCCCTCTGTCCATACCTACTTCTAGGATTGCAAAGGAGTCTTCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265000.9
CDS-3UTR CAA 90 bp GTTCCAGGTTTGGAGCTATACAGAGTTAATAACAATAGTTGCAGCAGGTTTCAGCCCAAAACCAATGGCTaGGCTTTCTCTCCAGGGCCA +
Preference number: 5 (lower is better)
Translates to: VPGLELYRVNNNSCSRFQPKTNG*AFSPGP
Trigger: TGGCCCTGGAGAGAAAGCCAAGCCATTGGTTTTGGG...CTGAAACCTGCTGCAACTATTGTTATTAACTCTGTATAGCTCCAAACCTGGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265000.9
CDS-3UTR CAA 90 bp TCATATGTGTTGCCATTTATGACATCTATAAGCGGCACAGTGCAAATGGTTCTGCCCAAAACCAATGGCTaGGCTTTCTCTCCAGGGCCA +
Preference number: 5 (lower is better)
Translates to: SYVLPFMTSISGTVQMVLPKTNG*AFSPGP
Trigger: TGGCCCTGGAGAGAAAGCCAAGCCATTGGTTTTGGG...CAGAACCATTTGCACTGTGCCGCTTATAGATGTCATAAATGGCAACACATATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512285.5
CDS GCA 90 bp CACAGTACATGTAGTTCTGTCCTTAGATATGGGAGCTACAAGTGGTaGATACCAGTTAACTGCCACCTCACAGTGGGCATCAAGGTATAT +
Preference number: 5 (lower is better)
Translates to: HSTCSSVLRYGSYKW*IPVNCHLTVGIKVY
Trigger: ATATACCTTGATGCCCACTGTGAGGTGGCAGTTAACTGGTATGCACCACTTGTAGCTCCCATATCTAAGGACAGAACTACATGTACTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505308.5
ENST00000512285.5
CDS TCA 90 bp TTTATTCTTCTAATAGACTCTAAGTCCACTTCTACTCCTTCAACATaGGGCCATGGTACCACAGGTTTGAATCTGTCCTCCCCAGGAGCT +
Preference number: 5 (lower is better)
Translates to: FILLIDSKSTSTPST*GHGTTGLNLSSPGA
Trigger: AGCTCCTGGGGAGGACAGATTCAAACCTGTGGTACCATGGCCTCATGTTGAAGGAGTAGAAGTGGACTTAGAGTCTATTAGAAGAATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265000.9
ENST00000512285.5
CDS TCA 90 bp CCTTGGAGTCCTTTTAATTACACTGTGGACTGTTCTCATGAGGGTTaGCCATCCTTCATTATGGAAGACAATGACAACGCTCGAAGTGAG +
Preference number: 5 (lower is better)
Translates to: PWSPFNYTVDCSHEG*PSFIMEDNDNARSE
Trigger: CTCACTTCGAGCGTTGTCATTGTCTTCCATAATGAAGGATGGTCAACCCTCATGAGAACAGTCCACAGTGTAATTAAAAGGACTCCAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265000.9
ENST00000502407.1
ENST00000505308.5
ENST00000512285.5
CDS TCA 90 bp TCAGTCAGCAAATATGGACTGTGCACCTATAATGATAACAGGTTTTaGGGATATGAAGAGGTGCAAGTCATGGTCCTCACCGCCTGTAGA +
Preference number: 5 (lower is better)
Translates to: SVSKYGLCTYNDNRF*GYEEVQVMVLTACR
Trigger: TCTACAGGCGGTGAGGACCATGACTTGCACCTCTTCATATCCTCAAAACCTGTTATCATTATAGGTGCACAGTCCATATTTGCTGACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515862.1
CDS GCA 90 bp ATCAGCTCCCTTTGTCAAACACTGGTCATACTGCATGAGTTGATTTaGTTCATTGATTCTGAAAAGCTGATTCCCTCCCATCCTGTGGCA +
Preference number: 5 (lower is better)
Translates to: ISSLCQTLVILHELI*FIDSEKLIPSHPVA
Trigger: TGCCACAGGATGGGAGGGAATCAGCTTTTCAGAATCAATGAAGCAAATCAACTCATGCAGTATGACCAGTGTTTGACAAAGGGAGCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265000.9
ENST00000503213.1
ENST00000505308.5
ENST00000515862.1
CDS-3UTR CAA 90 bp TATGGACAGAGGGCACTGGGAATGCCAGTAGGTAAGGGAGTGAATGCTACACAACATAATTCTTCAGAGTaGGAGAAGACCCAACATAAA +
Preference number: 5 (lower is better)
Translates to: YGQRALGMPVGKGVNATQHNSSE*EKTQHK
Trigger: TTTATGTTGGGTCTTCTCCAACTCTGAAGAATTATG...TTGTGTAGCATTCACTCCCTTACCTACTGGCATTCCCAGTGCCCTCTGTCCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265000.9
CDS-3UTR CAA 90 bp CCAGGTTTGGAGCTATACAGAGTTAATAACAATAGTTGCAGCAGGTTTCAGGCGATCCATCAGCTCCCTTaGTCAAACACTGGTCATACT +
Preference number: 5 (lower is better)
Translates to: PGLELYRVNNNSCSRFQAIHQLP*SNTGHT
Trigger: AGTATGACCAGTGTTTGACAAAGGGAGCTGATGGAT...CGCCTGAAACCTGCTGCAACTATTGTTATTAACTCTGTATAGCTCCAAACCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265000.9
ENST00000505308.5
CDS-3UTR CAA 90 bp GAGCTATACAGAGTTAATAACAATAGTTGCAGCAGGTTTCAGGCGGTTTTCAGTCCCTATGGGACAGCCTaGGGATGTTCCATATTGTCA +
Preference number: 5 (lower is better)
Translates to: ELYRVNNNSCSRFQAVFSPYGTA*GCSILS
Trigger: TGACAATATGGAACATCCCAAGGCTGTCCCATAGGG...ACTGAAAACCGCCTGAAACCTGCTGCAACTATTGTTATTAACTCTGTATAGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265000.9
CDS-3UTR CAA 90 bp CCAGGTTTGGAGCTATACAGAGTTAATAACAATAGTTGCAGCAGGTTTCAGGCGTTCATCACCACCCCCTaGGGGTATAATTTCATATGT +
Preference number: 5 (lower is better)
Translates to: PGLELYRVNNNSCSRFQAFITTP*GYNFIC
Trigger: ACATATGAAATTATACCCCAAGGGGGTGGTGATGAA...CGCCTGAAACCTGCTGCAACTATTGTTATTAACTCTGTATAGCTCCAAACCTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265000.9
CDS-3UTR CAA 90 bp AATCACAGTTTATCAATGTCCTTCAAACTGATCAGGAGGTTCCAGGTTTGGAGCGGTGTTTTGTTGTTTTaGTCACCCTCGCTTTCAAGG +
Preference number: 5 (lower is better)
Translates to: NHSLSMSFKLIRRFQVWSGVLLF*SPSLSR
Trigger: CCTTGAAAGCGAGGGTGACAAAAACAACAAAACACC...GCTCCAAACCTGGAACCTCCTGATCAGTTTGAAGGACATTGATAAACTGTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265000.9
CDS-3UTR CAA 90 bp GGTTTGGAGCTATACAGAGTTAATAACAATAGTTGCAGCAGGTTTCAGGCGGTTATCTTCATCCCCACCTaGCTGTGGTTCAATGGAATA +
Preference number: 5 (lower is better)
Translates to: GLELYRVNNNSCSRFQAVIFIPT*LWFNGI
Trigger: TATTCCATTGAACCACAGCAAGGTGGGGATGAAGAT...AACCGCCTGAAACCTGCTGCAACTATTGTTATTAACTCTGTATAGCTCCAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505308.5
CDS-3UTR CAA 90 bp TACCCATCTTCATCACCACCCCCTTGGGGTATAATTTCATATGTGTTGCCATTTATCTTCATCCCCACCTaGCTGTGGTTCAATGGAATA +
Preference number: 5 (lower is better)
Translates to: YPSSSPPPWGIISYVLPFIFIPT*LWFNGI
Trigger: TATTCCATTGAACCACAGCAAGGTGGGGATGAAGAT...AAATGGCAACACATATGAAATTATACCCCAAGGGGGTGGTGATGAAGATGGGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000512285.5
CDS GCA 90 bp TTAGACCAGGCAACAAGGGATCAGATTCTGGAACTAGATATGAAGTaGGAGACAAAGACAGGATTCATGGAAGACTCCAAAGTTTTTGAC +
Preference number: 5 (lower is better)
Translates to: LDQATRDQILELDMK*ETKTGFMEDSKVFD
Trigger: GTCAAAAACTTTGGAGTCTTCCATGAATCCTGTCTTTGTCTCGCACTTCATATCTAGTTCCAGAATCTGATCCCTTGTTGCCTGGTCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515862.1
CDS-3UTR CAA 90 bp TGGAGCTATACAGAGTTAATAACAATAGTTGCAGCAGGTTTCAGGCGGTTTTCAGCTGGCTTGAATTGCTaGTTTGAATTCTGGTCCCAA +
Preference number: 5 (lower is better)
Translates to: WSYTELITIVAAGFRRFSAGLNC*FEFWSQ
Trigger: TTGGGACCAGAATTCAAACAAGCAATTCAAGCCAGC...TGAAAACCGCCTGAAACCTGCTGCAACTATTGTTATTAACTCTGTATAGCTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265000.9
CDS-3UTR CAA 90 bp AATGGAAGCGTATGTATGGACCCACACATTTATACGAGTTCATGGGGAAGAAAAGCTGGCTTGAATTGCTaGTTTGAATTCTGGTCCCAA +
Preference number: 5 (lower is better)
Translates to: NGSVCMDPHIYTSSWGRKAGLNC*FEFWSQ
Trigger: TTGGGACCAGAATTCAAACAAGCAATTCAAGCCAGC...TTTTCTTCCCCATGAACTCGTATAAATGTGTGGGTCCATACATACGCTTCCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512285.5
CDS-3UTR CAA 90 bp CCAGGTTTGGAGCTATACAGAGTTAATAACAATAGTTGCAGCAGGTTTCAGGCGCCACACTGCCATATCTaGTATGAGATCTCAAAGTTT +
Preference number: 5 (lower is better)
Translates to: PGLELYRVNNNSCSRFQAPHCHI*YEISKF
Trigger: AAACTTTGAGATCTCATACAAGATATGGCAGTGTGG...CGCCTGAAACCTGCTGCAACTATTGTTATTAACTCTGTATAGCTCCAAACCTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265000.9
ENST00000505308.5
CDS-3UTR CAA 90 bp GGTTTGGAGCTATACAGAGTTAATAACAATAGTTGCAGCAGGTTTCAGGCGGTTAATCTGTGCAGGTTCTaGAAGTACTGCCATTCCTTA +
Preference number: 5 (lower is better)
Translates to: GLELYRVNNNSCSRFQAVNLCRF*KYCHSL
Trigger: TAAGGAATGGCAGTACTTCAAGAACCTGCACAGATT...AACCGCCTGAAACCTGCTGCAACTATTGTTATTAACTCTGTATAGCTCCAAACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265000.9
ENST00000505308.5
CDS-3UTR CAA 90 bp GTTCCAGGTTTGGAGCTATACAGAGTTAATAACAATAGTTGCAGCAGGTTTCAGCAGGAGGTTCCAGGTTaGGAGCTATACAGAGTTAAT +
Preference number: 5 (lower is better)
Translates to: VPGLELYRVNNNSCSRFQQEVPG*ELYRVN
Trigger: ATTAACTCTGTATAGCTCCAAACCTGGAACCTCCTG...CTGAAACCTGCTGCAACTATTGTTATTAACTCTGTATAGCTCCAAACCTGGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265000.9
ENST00000505308.5
CDS TCA 90 bp ATGTCACTTGCCACCATGTTAAATCCAAACTCTTTAATGCTGGCTTaGATTGCTTGTTTGAATTCTGGTCCCAAAACCAATGGCTTGGCT +
Preference number: 5 (lower is better)
Translates to: MSLATMLNPNSLMLA*IACLNSGPKTNGLA
Trigger: AGCCAAGCCATTGGTTTTGGGACCAGAATTCAAACAAGCAATTCAAGCCAGCATTAAAGAGTTTGGATTTAACATGGTGGCAAGTGACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265000.9
ENST00000512285.5
CDS TCA 90 bp TCATTTCCCATTTTTGAGTCGTTTTACTGGAGTCACAATTGGAGATaGATACTTGATGCAGGACCTCTGAGCGATCTAAACACTTTCCTG +
Preference number: 5 (lower is better)
Translates to: SFPIFESFYWSHNWR*ILDAGPLSDLNTFL
Trigger: CAGGAAAGTGTTTAGATCGCTCAGAGGTCCTGCATCAAGTATTCATCTCCAATTGTGACTCCAGTAAAACGACTCAAAAATGGGAAATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265000.9
ENST00000505308.5
ENST00000515862.1
CDS GCA 90 bp TACTGCCTCTGCATGATATCTTTCTGGGAATCTCCTCCAGCATGGTaGTCTTGTTCATTTTTGGCCTTGTTTATTCTTCTAATAGACTCT +
Preference number: 5 (lower is better)
Translates to: YCLCMISFWESPPAW*SCSFLALFILLIDS
Trigger: AGAGTCTATTAGAAGAATAAACAAGGCCAAAAATGAACAAGAGCACCATGCTGGAGGAGATTCCCAGAAAGATATCATGCAGAGGCAGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265000.9
ENST00000512285.5
CDS GCA 90 bp ACTTGCCACCATGTTAAATCCAAACTCTTTAATGCTGGCTTGAATTaGTTGTTTGAATTCTGGTCCCAAAACCAATGGCTTGGCTTTCTC +
Preference number: 5 (lower is better)
Translates to: TCHHVKSKLFNAGLN*LFEFWSQNQWLGFL
Trigger: GAGAAAGCCAAGCCATTGGTTTTGGGACCAGAATTCAAACAAGCAATTCAAGCCAGCATTAAAGAGTTTGGATTTAACATGGTGGCAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265000.9
ENST00000512285.5
CDS CCA 90 bp AGATACTGCCTCTGCATGATATCTTTCTGGGAATCTCCTCCAGCATaGTGCTCTTGTTCATTTTTGGCCTTGTTTATTCTTCTAATAGAC +
Preference number: 5 (lower is better)
Translates to: RYCLCMISFWESPPA*CSCSFLALFILLID
Trigger: GTCTATTAGAAGAATAAACAAGGCCAAAAATGAACAAGAGCACCATGCTGGAGGAGATTCCCAGAAAGATATCATGCAGAGGCAGTATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265000.9
ENST00000512285.5
CDS-3UTR CAA 90 bp TCATATGTGTTGCCATTTATGACATCTATAAGCGGCACAGTGCAAATGGTTCTGTTCATCACCACCCCCTaGGGGTATAATTTCATATGT +
Preference number: 5 (lower is better)
Translates to: SYVLPFMTSISGTVQMVLFITTP*GYNFIC
Trigger: ACATATGAAATTATACCCCAAGGGGGTGGTGATGAA...CAGAACCATTTGCACTGTGCCGCTTATAGATGTCATAAATGGCAACACATATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512285.5
CDS-3UTR CAA 90 bp AATCACAGTTTATCAATGTCCTTCAAACTGATCAGGAGGTTCCAGGTTTGGAGCGGAACAAATAATAATTaGCCACCACACTGCCATATC +
Preference number: 5 (lower is better)
Translates to: NHSLSMSFKLIRRFQVWSGTNNN*PPHCHI
Trigger: GATATGGCAGTGTGGTGGCAAATTATTATTTGTTCC...GCTCCAAACCTGGAACCTCCTGATCAGTTTGAAGGACATTGATAAACTGTGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265000.9
ENST00000505308.5
CDS-3UTR CAA 90 bp CCAGGTTTGGAGCTATACAGAGTTAATAACAATAGTTGCAGCAGGTTTCAGGCGCATAATTCTTCAGAGTaGGAGAAGACCCAACATAAA +
Preference number: 5 (lower is better)
Translates to: PGLELYRVNNNSCSRFQAHNSSE*EKTQHK
Trigger: TTTATGTTGGGTCTTCTCCAACTCTGAAGAATTATG...CGCCTGAAACCTGCTGCAACTATTGTTATTAACTCTGTATAGCTCCAAACCTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265000.9
ENST00000505308.5
CDS-3UTR CAA 90 bp GGTTTGGAGCTATACAGAGTTAATAACAATAGTTGCAGCAGGTTTCAGGCGGTTCAACAAAGCCTCCATTaGTTTTTCCCATGCTATCAA +
Preference number: 5 (lower is better)
Translates to: GLELYRVNNNSCSRFQAVQQSLH*FFPCYQ
Trigger: TTGATAGCATGGGAAAAACAAATGGAGGCTTTGTTG...AACCGCCTGAAACCTGCTGCAACTATTGTTATTAACTCTGTATAGCTCCAAACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265000.9
ENST00000505308.5
CDS-3UTR CAA 90 bp GTTCCAGGTTTGGAGCTATACAGAGTTAATAACAATAGTTGCAGCAGGTTTCAGAATCTGTGCAGGTTCTaGAAGTACTGCCATTCCTTA +
Preference number: 5 (lower is better)
Translates to: VPGLELYRVNNNSCSRFQNLCRF*KYCHSL
Trigger: TAAGGAATGGCAGTACTTCAAGAACCTGCACAGATT...CTGAAACCTGCTGCAACTATTGTTATTAACTCTGTATAGCTCCAAACCTGGAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265000.9
ENST00000505308.5
CDS-3UTR CAA 90 bp AGACACAACAGGTTGATAATCACCAAGTTATATATGAAAGTCTGGCTACTCCAAAACATCAGTTCACTCTaGGCTTCACAGGTTGCACAG +
Preference number: 5 (lower is better)
Translates to: RHNRLIITKLYMKVWLLQNISSL*ASQVAQ
Trigger: CTGTGCAACCTGTGAAGCCAAGAGTGAACTGATGTT...TTGGAGTAGCCAGACTTTCATATATAACTTGGTGATTATCAACCTGTTGTGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265000.9
CDS-3UTR CAA 90 bp CTATACAGAGTTAATAACAATAGTTGCAGCAGGTTTCAGGCGGTTTTCAGTCCTCCACACTGCCATATCTaGTATGAGATCTCAAAGTTT +
Preference number: 5 (lower is better)
Translates to: LYRVNNNSCSRFQAVFSPPHCHI*YEISKF
Trigger: AAACTTTGAGATCTCATACAAGATATGGCAGTGTGG...AGGACTGAAAACCGCCTGAAACCTGCTGCAACTATTGTTATTAACTCTGTATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265000.9
ENST00000505308.5
CDS-3UTR CAA 90 bp GTTCCAGGTTTGGAGCTATACAGAGTTAATAACAATAGTTGCAGCAGGTTTCAGCAACAAAGCCTCCATTaGTTTTTCCCATGCTATCAA +
Preference number: 5 (lower is better)
Translates to: VPGLELYRVNNNSCSRFQQQSLH*FFPCYQ
Trigger: TTGATAGCATGGGAAAAACAAATGGAGGCTTTGTTG...CTGAAACCTGCTGCAACTATTGTTATTAACTCTGTATAGCTCCAAACCTGGAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265000.9
ENST00000505308.5
CDS-3UTR CAA 90 bp GGTTTGGAGCTATACAGAGTTAATAACAATAGTTGCAGCAGGTTTCAGGCGGTTGTCATACTGCATGAGTaGATTTGCTTCATTGATTCT +
Preference number: 5 (lower is better)
Translates to: GLELYRVNNNSCSRFQAVVILHE*ICFIDS
Trigger: AGAATCAATGAAGCAAATCAACTCATGCAGTATGAC...AACCGCCTGAAACCTGCTGCAACTATTGTTATTAACTCTGTATAGCTCCAAACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265000.9
ENST00000505308.5
CDS-3UTR CAA 90 bp AAGACACAACAGGTTGATAATCACCAAGTTATATATGAAAGTCTGGCTACTCCAATCCATCAGCTCCCTTaGTCAAACACTGGTCATACT +
Preference number: 5 (lower is better)
Translates to: KTQQVDNHQVIYESLATPIHQLP*SNTGHT
Trigger: AGTATGACCAGTGTTTGACAAAGGGAGCTGATGGAT...TGGAGTAGCCAGACTTTCATATATAACTTGGTGATTATCAACCTGTTGTGTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265000.9
CDS-3UTR CAA 90 bp AGACACAACAGGTTGATAATCACCAAGTTATATATGAAAGTCTGGCTACTCCAACAGGAGGTTCCAGGTTaGGAGCTATACAGAGTTAAT +
Preference number: 5 (lower is better)
Translates to: RHNRLIITKLYMKVWLLQQEVPG*ELYRVN
Trigger: ATTAACTCTGTATAGCTCCAAACCTGGAACCTCCTG...TTGGAGTAGCCAGACTTTCATATATAACTTGGTGATTATCAACCTGTTGTGTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265000.9
CDS-3UTR CAA 90 bp ATGGAAGCGTATGTATGGACCCACACATTTATACGAGTTCATGGGGAAGAAAAATGGTTCTGTATTGTGTaGATGGCAGCAAAGATCAAA +
Preference number: 5 (lower is better)
Translates to: MEAYVWTHTFIRVHGEEKWFCIV*MAAKIK
Trigger: TTTGATCTTTGCTGCCATCAACACAATACAGAACCA...TTTTTCTTCCCCATGAACTCGTATAAATGTGTGGGTCCATACATACGCTTCCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512285.5
CDS-3UTR CAA 90 bp TATACAGAGTTAATAACAATAGTTGCAGCAGGTTTCAGGCGGTTTTCAGTCCTGATTCATTTCCCATTTTaGAGTCGTTTTACTGGAGTC +
Preference number: 5 (lower is better)
Translates to: YTELITIVAAGFRRFSVLIHFPF*SRFTGV
Trigger: GACTCCAGTAAAACGACTCAAAAATGGGAAATGAAT...CAGGACTGAAAACCGCCTGAAACCTGCTGCAACTATTGTTATTAACTCTGTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265000.9
ENST00000505308.5
CDS-3UTR CAA 90 bp AAGACACAACAGGTTGATAATCACCAAGTTATATATGAAAGTCTGGCTACTCCATCTTGGCTTCACAGGTaGCACAGCTTAGGTTATAAT +
Preference number: 5 (lower is better)
Translates to: KTQQVDNHQVIYESLATPSWLHR*HSLGYN
Trigger: ATTATAACCTAAGCTGTGCAACCTGTGAAGCCAAGA...TGGAGTAGCCAGACTTTCATATATAACTTGGTGATTATCAACCTGTTGTGTCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265000.9
CDS-3UTR CAA 90 bp TGGAGCTATACAGAGTTAATAACAATAGTTGCAGCAGGTTTCAGGCGGTTTTCAAAATGCTTAACTTACTaGCCATTCTGCTCACATCAT +
Preference number: 5 (lower is better)
Translates to: WSYTELITIVAAGFRRFSKCLTY*PFCSHH
Trigger: ATGATGTGAGCAGAATGGCAAGTAAGTTAAGCATTT...TGAAAACCGCCTGAAACCTGCTGCAACTATTGTTATTAACTCTGTATAGCTCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265000.9
CDS-3UTR CAA 90 bp AAGACACAACAGGTTGATAATCACCAAGTTATATATGAAAGTCTGGCTACTCCAGGAACAAATAATAATTaGCCACCACACTGCCATATC +
Preference number: 5 (lower is better)
Translates to: KTQQVDNHQVIYESLATPGTNNN*PPHCHI
Trigger: GATATGGCAGTGTGGTGGCAAATTATTATTTGTTCC...TGGAGTAGCCAGACTTTCATATATAACTTGGTGATTATCAACCTGTTGTGTCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265000.9
CDS-3UTR CAA 90 bp GTAAAATCACAGTTTATCAATGTCCTTCAAACTGATCAGGAGGTTCCAGGTTTGATTCATTTCCCATTTTaGAGTCGTTTTACTGGAGTC +
Preference number: 5 (lower is better)
Translates to: VKSQFINVLQTDQEVPGLIHFPF*SRFTGV
Trigger: GACTCCAGTAAAACGACTCAAAAATGGGAAATGAAT...CAAACCTGGAACCTCCTGATCAGTTTGAAGGACATTGATAAACTGTGATTTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265000.9
ENST00000505308.5
CDS-3UTR CAA 90 bp AAGACACAACAGGTTGATAATCACCAAGTTATATATGAAAGTCTGGCTACTCCATATAACGGTGTTTTGTaGTTTTTGTCACCCTCGCTT +
Preference number: 5 (lower is better)
Translates to: KTQQVDNHQVIYESLATPYNGVL*FLSPSL
Trigger: AAGCGAGGGTGACAAAAACAACAAAACACCGTTATA...TGGAGTAGCCAGACTTTCATATATAACTTGGTGATTATCAACCTGTTGTGTCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265000.9
CDS-3UTR CAA 90 bp AGACACAACAGGTTGATAATCACCAAGTTATATATGAAAGTCTGGCTACTCCAAGTTTATAACGGTGTTTaGTTGTTTTTGTCACCCTCG +
Preference number: 5 (lower is better)
Translates to: RHNRLIITKLYMKVWLLQVYNGV*LFLSPS
Trigger: CGAGGGTGACAAAAACAACAAAACACCGTTATAAAC...TTGGAGTAGCCAGACTTTCATATATAACTTGGTGATTATCAACCTGTTGTGTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265000.9
CDS-3UTR CAA 90 bp AAGACACAACAGGTTGATAATCACCAAGTTATATATGAAAGTCTGGCTACTCCAGTCATACTGCATGAGTaGATTTGCTTCATTGATTCT +
Preference number: 5 (lower is better)
Translates to: KTQQVDNHQVIYESLATPVILHE*ICFIDS
Trigger: AGAATCAATGAAGCAAATCAACTCATGCAGTATGAC...TGGAGTAGCCAGACTTTCATATATAACTTGGTGATTATCAACCTGTTGTGTCTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265000.9
CDS CCA 72 bp GACATCTCTGTCTTCCCTCATCCTGCTCAGCGGGCTTaGGTCGTCCGGCCGCGGGGTCAGGGAAGACCAGAG +
Preference number: 6 (lower is better)
Translates to: DISVFPHPAQRA*VVRPRGQGRPE
Trigger: CTCTGGTCTTCCCTGACCCCGCGGCCGGACGACCCAAGCCCGCTGAGCAGGATGAGGGAAGACAGAGATGTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265000.9
ENST00000512285.5
CDS TCA 72 bp GGAACAGCACAGGCAGGCACATGCCTGGAGGGAGTCTaGGGACCAGTAAGGACATGGGGCTGGAGTGGAGTG +
Preference number: 6 (lower is better)
Translates to: GTAQAGTCLEGV*GPVRTWGWSGV
Trigger: CACTCCACTCCAGCCCCATGTCCTTACTGGTCCTCAGACTCCCTCCAGGCATGTGCCTGCCTGTGCTGTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515862.1
CDS TCA 72 bp CTAGTCCATTGCCGCCTCGGTTGGGCATGGGGTCATTaGCATCTCTGTCTTCCCTCATCCTGCTCAGCGGGC +
Preference number: 6 (lower is better)
Translates to: LVHCRLGWAWGH*HLCLPSSCSAG
Trigger: GCCCGCTGAGCAGGATGAGGGAAGACAGAGATGTCAATGACCCCATGCCCAACCGAGGCGGCAATGGACTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265000.9
ENST00000512285.5
CDS CAA 72 bp GCTAGTCCATTGCCGCCTCGGTTGGGCATGGGGTCATaGACATCTCTGTCTTCCCTCATCCTGCTCAGCGGG +
Preference number: 6 (lower is better)
Translates to: ASPLPPRLGMGS*TSLSSLILLSG
Trigger: CCCGCTGAGCAGGATGAGGGAAGACAGAGATGTCAATGACCCCATGCCCAACCGAGGCGGCAATGGACTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265000.9
ENST00000512285.5
CDS CAA 72 bp CTGTCCTCCCCAGGAGCTAGTCCATTGCCGCCTCGGTaGGGCATGGGGTCATTGACATCTCTGTCTTCCCTC +
Preference number: 6 (lower is better)
Translates to: LSSPGASPLPPR*GMGSLTSLSSL
Trigger: GAGGGAAGACAGAGATGTCAATGACCCCATGCCCAACCGAGGCGGCAATGGACTAGCTCCTGGGGAGGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265000.9
ENST00000512285.5
CDS CAA 90 bp GGTTTGAATCTGTCCTCCCCAGGAGCTAGTCCATTGCCGCCTCGGTaGGGCATGGGGTCATTGACATCTCTGTCTTCCCTCATCCTGCTC +
Preference number: 6 (lower is better)
Translates to: GLNLSSPGASPLPPR*GMGSLTSLSSLILL
Trigger: GAGCAGGATGAGGGAAGACAGAGATGTCAATGACCCCATGCCCAACCGAGGCGGCAATGGACTAGCTCCTGGGGAGGACAGATTCAAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265000.9
ENST00000512285.5
CDS CAA 90 bp GCTTTCTCTCCAGGGCCACCAACCACTCCAGGAGGCTCAGGTTCTTaGGGTTCAAAGTTACCGAGGATCCCTGGGCGAAGCACAGGATCA +
Preference number: 6 (lower is better)
Translates to: AFSPGPPTTPGGSGS*GSKLPRIPGRSTGS
Trigger: TGATCCTGTGCTTCGCCCAGGGATCCTCGGTAACTTTGAACCCAAAGAACCTGAGCCTCCTGGAGTGGTTGGTGGCCCTGGAGAGAAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265000.9
ENST00000512285.5
CDS TCA 72 bp CCAGGAAGCTTCCCACCACCAGCAAACTGCGTAAGATaGACCCAATCTTCAGCCTCATCTTCCTCCGGCGGC +
Preference number: 6 (lower is better)
Translates to: PGSFPPPANCVR*TQSSASSSSGG
Trigger: GCCGCCGGAGGAAGATGAGGCTGAAGATTGGGTTCATCTTACGCAGTTTGCTGGTGGTGGGAAGCTTCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265000.9
ENST00000512285.5
CDS GCA 72 bp AGAGGTGTGAATGTACAGAGGAAGAGCTGCTCACCCTaGCTGGAGGAGCTCCAAAGACTGCCCCAAGAGACA +
Preference number: 6 (lower is better)
Translates to: RGVNVQRKSCSP*LEELQRLPQET
Trigger: TGTCTCTTGGGGCAGTCTTTGGAGCTCCTCCAGGCAGGGTGAGCAGCTCTTCCTCTGTACATTCACACCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515862.1
CDS CAA 72 bp TGTAAGGGACCTCTCCCAAATGGCTATGCAGCACTTTaGGTAGCTGCCTGTAGGGGTCTAGGGTGCATAGGC +
Preference number: 6 (lower is better)
Translates to: CKGPLPNGYAAL*VAACRGLGCIG
Trigger: GCCTATGCACCCTAGACCCCTACAGGCAGCTACCAAAAGTGCTGCATAGCCATTTGGGAGAGGTCCCTTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515862.1
CDS CAA 90 bp GACTGGATTTGTAAGGGACCTCTCCCAAATGGCTATGCAGCACTTTaGGTAGCTGCCTGTAGGGGTCTAGGGTGCATAGGCCATGCATGG +
Preference number: 6 (lower is better)
Translates to: DWICKGPLPNGYAAL*VAACRGLGCIGHAW
Trigger: CCATGCATGGCCTATGCACCCTAGACCCCTACAGGCAGCTACCAAAAGTGCTGCATAGCCATTTGGGAGAGGTCCCTTACAAATCCAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515862.1
CDS TCA 72 bp ATAAAGACACCTACCCCAGTAATGGGCATGCCACAGTaGATGTGGGCCCCTGCCTCCATTCACTCTGGGAAT +
Preference number: 6 (lower is better)
Translates to: IKTPTPVMGMPQ*MWAPASIHSGN
Trigger: ATTCCCAGAGTGAATGGAGGCAGGGGCCCACATTCACTGTGGCATGCCCATTACTGGGGTAGGTGTCTTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515862.1
CDS CAA 72 bp GGAAAAGAAGAGGAAGTTAGGGTGGGAGCTAGGGCGTaGGGAAGTAACAAGGTGGACCTCACTGAGAAGTGG +
Preference number: 6 (lower is better)
Translates to: GKEEEVRVGARA*GSNKVDLTEKW
Trigger: CCACTTCTCAGTGAGGTCCACCTTGTTACTTCCCAACGCCCTAGCTCCCACCCTAACTTCCTCTTCTTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515862.1
CDS CCA 72 bp CTCAGGTTCTTTGGGTTCAAAGTTACCGAGGATCCCTaGGCGAAGCACAGGATCATGGTAGGTGAATGTCTG +
Preference number: 6 (lower is better)
Translates to: LRFFGFKVTEDP*AKHRIMVGECL
Trigger: CAGACATTCACCTACCATGATCCTGTGCTTCGCCCAGGGATCCTCGGTAACTTTGAACCCAAAGAACCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265000.9
ENST00000512285.5
CDS CCA 72 bp GAAAAGAAGAGGAAGTTAGGGTGGGAGCTAGGGCGTTaGGAAGTAACAAGGTGGACCTCACTGAGAAGTGGT +
Preference number: 6 (lower is better)
Translates to: EKKRKLGWELGR*EVTRWTSLRSG
Trigger: ACCACTTCTCAGTGAGGTCCACCTTGTTACTTCCCAACGCCCTAGCTCCCACCCTAACTTCCTCTTCTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515862.1
CDS CAA 72 bp GTAGCAGGTGAGGCCAGAGAGGAATGGGGACAGATGTaGTGGATCTTGGAGACTACCAGAAAGGACTTTGTC +
Preference number: 6 (lower is better)
Translates to: VAGEAREEWGQM*WILETTRKDFV
Trigger: GACAAAGTCCTTTCTGGTAGTCTCCAAGATCCACAACATCTGTCCCCATTCCTCTCTGGCCTCACCTGCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515862.1
CDS CCA 72 bp GCAAATGGTTCTGTCCTTAGATATGGGAGCTACAAGTaGTGCATACCAGTTAACTGCCACCTCACAGTGGGC +
Preference number: 6 (lower is better)
Translates to: ANGSVLRYGSYK*CIPVNCHLTVG
Trigger: GCCCACTGTGAGGTGGCAGTTAACTGGTATGCACCACTTGTAGCTCCCATATCTAAGGACAGAACCATTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265000.9
CDS CAA 72 bp ATTGCTTGTTTGAATTCTGGTCCCAAAACCAATGGCTaGGCTTTCTCTCCAGGGCCACCAACCACTCCAGGA +
Preference number: 6 (lower is better)
Translates to: IACLNSGPKTNG*AFSPGPPTTPG
Trigger: TCCTGGAGTGGTTGGTGGCCCTGGAGAGAAAGCCAAGCCATTGGTTTTGGGACCAGAATTCAAACAAGCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265000.9
ENST00000512285.5
CDS CAA 90 bp TCCCTCCCATCCTGTGGCAGGGTCCTAGTTCAACAAAGCCTCCATTaGTTTTTCCCATGCTATCAATGCAGTAAGCAGTTTCGAAGCCTC +
Preference number: 6 (lower is better)
Translates to: SLPSCGRVLVQQSLH*FFPCYQCSKQFRSL
Trigger: GAGGCTTCGAAACTGCTTACTGCATTGATAGCATGGGAAAAACAAATGGAGGCTTTGTTGAACTAGGACCCTGCCACAGGATGGGAGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265000.9
ENST00000503213.1
ENST00000505308.5
ENST00000515862.1
CDS CCA 72 bp CATAGAGACCCAATTCAAAGAAGAACTCTCGTTCAATaGCAAATAATCCCCCAGCCATGGCTGGGGACCGAT +
Preference number: 6 (lower is better)
Translates to: HRDPIQRRTLVQ*QIIPQPWLGTD
Trigger: ATCGGTCCCCAGCCATGGCTGGGGGATTATTTGCCATTGAACGAGAGTTCTTCTTTGAATTGGGTCTCTATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265000.9
ENST00000505308.5
ENST00000506317.1
CDS CCA 72 bp ACATGTAGTTCTGTCCTTAGATATGGGAGCTACAAGTaGTGCATACCAGTTAACTGCCACCTCACAGTGGGC +
Preference number: 6 (lower is better)
Translates to: TCSSVLRYGSYK*CIPVNCHLTVG
Trigger: GCCCACTGTGAGGTGGCAGTTAACTGGTATGCACCACTTGTAGCTCCCATATCTAAGGACAGAACTACATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505308.5
ENST00000512285.5
CDS TCA 72 bp AATGCCAATACTTGCATTCTTCTTGGCGTAAGTCATTaGCGCTGCGGTCCAGTGAGATCATGTCACTTGCCA +
Preference number: 6 (lower is better)
Translates to: NANTCILLGVSH*RCGPVRSCHLP
Trigger: TGGCAAGTGACATGATCTCACTGGACCGCAGCGTCAATGACTTACGCCAAGAAGAATGCAAGTATTGGCATT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265000.9
ENST00000512285.5
CDS CCA 72 bp AGGCCAGAGAGGAATGGGGACAGATGTTGTGGATCTTaGAGACTACCAGAAAGGACTTTGTCTTCACTCATA +
Preference number: 6 (lower is better)
Translates to: RPERNGDRCCGS*RLPERTLSSLI
Trigger: TATGAGTGAAGACAAAGTCCTTTCTGGTAGTCTCCAAGATCCACAACATCTGTCCCCATTCCTCTCTGGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515862.1
CDS GCA 72 bp AGATATGGGAGCTACAAGTGGTGCATACCAGTTAACTaGCACCTCACAGTGGGCATCAAGGTATATCAAAAC +
Preference number: 6 (lower is better)
Translates to: RYGSYKWCIPVN*HLTVGIKVYQN
Trigger: GTTTTGATATACCTTGATGCCCACTGTGAGGTGGCAGTTAACTGGTATGCACCACTTGTAGCTCCCATATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265000.9
ENST00000505308.5
ENST00000512285.5
CDS CCA 72 bp GATCTCAAAGTTTTCACCACCCCAAATCTGGAGACCTaGATCATAGAGACCCAATTCAAAGAAGAACTCTCG +
Preference number: 6 (lower is better)
Translates to: DLKVFTTPNLET*IIETQFKEELS
Trigger: CGAGAGTTCTTCTTTGAATTGGGTCTCTATGATCCAGGTCTCCAGATTTGGGGTGGTGAAAACTTTGAGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265000.9
ENST00000505308.5
ENST00000506317.1
CDS CAA 72 bp TCCTGTGGCAGGGTCCTAGTTCAACAAAGCCTCCATTaGTTTTTCCCATGCTATCAATGCAGTAAGCAGTTT +
Preference number: 6 (lower is better)
Translates to: SCGRVLVQQSLH*FFPCYQCSKQF
Trigger: AAACTGCTTACTGCATTGATAGCATGGGAAAAACAAATGGAGGCTTTGTTGAACTAGGACCCTGCCACAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265000.9
ENST00000503213.1
ENST00000505308.5
ENST00000515862.1
CDS TCA 72 bp GTCGTTTTACTGGAGTCACAATTGGAGATGAATACTTaGTGCAGGACCTCTGAGCGATCTAAACACTTTCCT +
Preference number: 6 (lower is better)
Translates to: VVLLESQLEMNT*CRTSERSKHFP
Trigger: AGGAAAGTGTTTAGATCGCTCAGAGGTCCTGCATCAAGTATTCATCTCCAATTGTGACTCCAGTAAAACGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265000.9
ENST00000505308.5
ENST00000515862.1
CDS GCA 72 bp GCAACAAGGGATCAGATTCTGGAACTAGATATGAAGTaGGAGACAAAGACAGGATTCATGGAAGACTCCAAA +
Preference number: 6 (lower is better)
Translates to: ATRDQILELDMK*ETKTGFMEDSK
Trigger: TTTGGAGTCTTCCATGAATCCTGTCTTTGTCTCGCACTTCATATCTAGTTCCAGAATCTGATCCCTTGTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515862.1
CDS CCA 72 bp GCAAATAGAGAACCTAACCACAGTGGTAATAAACACTaGCCTGGCCCTAGATATCTAGAACAGACTGGATTT +
Preference number: 6 (lower is better)
Translates to: ANREPNHSGNKH*PGPRYLEQTGF
Trigger: AAATCCAGTCTGTTCTAGATATCTAGGGCCAGGCCAGTGTTTATTACCACTGTGGTTAGGTTCTCTATTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515862.1
CDS CAA 90 bp TGCCACCATGTTAAATCCAAACTCTTTAATGCTGGCTTGAATTGCTaGTTTGAATTCTGGTCCCAAAACCAATGGCTTGGCTTTCTCTCC +
Preference number: 6 (lower is better)
Translates to: CHHVKSKLFNAGLNC*FEFWSQNQWLGFLS
Trigger: GGAGAGAAAGCCAAGCCATTGGTTTTGGGACCAGAATTCAAACAAGCAATTCAAGCCAGCATTAAAGAGTTTGGATTTAACATGGTGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265000.9
ENST00000512285.5
CDS CAA 90 bp CATGTCACTTGCCACCATGTTAAATCCAAACTCTTTAATGCTGGCTaGAATTGCTTGTTTGAATTCTGGTCCCAAAACCAATGGCTTGGC +
Preference number: 6 (lower is better)
Translates to: HVTCHHVKSKLFNAG*NCLFEFWSQNQWLG
Trigger: GCCAAGCCATTGGTTTTGGGACCAGAATTCAAACAAGCAATTCAAGCCAGCATTAAAGAGTTTGGATTTAACATGGTGGCAAGTGACATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265000.9
ENST00000512285.5
CDS TCA 72 bp CCTTTTAATTACACTGTGGACTGTTCTCATGAGGGTTaGCCATCCTTCATTATGGAAGACAATGACAACGCT +
Preference number: 6 (lower is better)
Translates to: PFNYTVDCSHEG*PSFIMEDNDNA
Trigger: AGCGTTGTCATTGTCTTCCATAATGAAGGATGGTCAACCCTCATGAGAACAGTCCACAGTGTAATTAAAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265000.9
ENST00000502407.1
ENST00000505308.5
ENST00000512285.5
CDS TCA 72 bp AAATATGGACTGTGCACCTATAATGATAACAGGTTTTaGGGATATGAAGAGGTGCAAGTCATGGTCCTCACC +
Preference number: 6 (lower is better)
Translates to: KYGLCTYNDNRF*GYEEVQVMVLT
Trigger: GGTGAGGACCATGACTTGCACCTCTTCATATCCTCAAAACCTGTTATCATTATAGGTGCACAGTCCATATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515862.1
CDS CAA 72 bp TGGGAATCTCCTCCAGCATGGTGCTCTTGTTCATTTTaGGCCTTGTTTATTCTTCTAATAGACTCTAAGTCC +
Preference number: 6 (lower is better)
Translates to: WESPPAWCSCSF*ALFILLIDSKS
Trigger: GGACTTAGAGTCTATTAGAAGAATAAACAAGGCCAAAAATGAACAAGAGCACCATGCTGGAGGAGATTCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265000.9
ENST00000512285.5
CDS CAA 90 bp TTCTGGGAATCTCCTCCAGCATGGTGCTCTTGTTCATTTTTGGCCTaGTTTATTCTTCTAATAGACTCTAAGTCCACTTCTACTCCTTCA +
Preference number: 6 (lower is better)
Translates to: FWESPPAWCSCSFLA*FILLIDSKSTSTPS
Trigger: TGAAGGAGTAGAAGTGGACTTAGAGTCTATTAGAAGAATAAACAAGGCCAAAAATGAACAAGAGCACCATGCTGGAGGAGATTCCCAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265000.9
ENST00000512285.5
CDS TCA 72 bp ATTTTTGAGTCGTTTTACTGGAGTCACAATTGGAGATaGATACTTGATGCAGGACCTCTGAGCGATCTAAAC +
Preference number: 6 (lower is better)
Translates to: IFESFYWSHNWR*ILDAGPLSDLN
Trigger: GTTTAGATCGCTCAGAGGTCCTGCATCAAGTATTCATCTCCAATTGTGACTCCAGTAAAACGACTCAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265000.9
ENST00000505308.5
ENST00000515862.1
CDS CAA 72 bp GTTAAATCCAAACTCTTTAATGCTGGCTTGAATTGCTaGTTTGAATTCTGGTCCCAAAACCAATGGCTTGGC +
Preference number: 6 (lower is better)
Translates to: VKSKLFNAGLNC*FEFWSQNQWLG
Trigger: GCCAAGCCATTGGTTTTGGGACCAGAATTCAAACAAGCAATTCAAGCCAGCATTAAAGAGTTTGGATTTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265000.9
ENST00000512285.5
CDS CAA 90 bp ATATCTTTCTGGGAATCTCCTCCAGCATGGTGCTCTTGTTCATTTTaGGCCTTGTTTATTCTTCTAATAGACTCTAAGTCCACTTCTACT +
Preference number: 6 (lower is better)
Translates to: ISFWESPPAWCSCSF*ALFILLIDSKSTST
Trigger: AGTAGAAGTGGACTTAGAGTCTATTAGAAGAATAAACAAGGCCAAAAATGAACAAGAGCACCATGCTGGAGGAGATTCCCAGAAAGATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265000.9
ENST00000512285.5
CDS CAA 72 bp TGCCACCATGTTAAATCCAAACTCTTTAATGCTGGCTaGAATTGCTTGTTTGAATTCTGGTCCCAAAACCAA +
Preference number: 6 (lower is better)
Translates to: CHHVKSKLFNAG*NCLFEFWSQNQ
Trigger: TTGGTTTTGGGACCAGAATTCAAACAAGCAATTCAAGCCAGCATTAAAGAGTTTGGATTTAACATGGTGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265000.9
ENST00000512285.5
CDS GCA 72 bp CATGTTAAATCCAAACTCTTTAATGCTGGCTTGAATTaGTTGTTTGAATTCTGGTCCCAAAACCAATGGCTT +
Preference number: 6 (lower is better)
Translates to: HVKSKLFNAGLN*LFEFWSQNQWL
Trigger: AAGCCATTGGTTTTGGGACCAGAATTCAAACAAGCAATTCAAGCCAGCATTAAAGAGTTTGGATTTAACATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265000.9
ENST00000512285.5
CDS CAA 72 bp ATATGTCCAACACGAGAACAAGGAACAAATAATAATTaGCCACCACACTGCCATATCTTGTATGAGATCTCA +
Preference number: 6 (lower is better)
Translates to: ICPTREQGTNNN*PPHCHILYEIS
Trigger: TGAGATCTCATACAAGATATGGCAGTGTGGTGGCAAATTATTATTTGTTCCTTGTTCTCGTGTTGGACATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265000.9
ENST00000505308.5
ENST00000506317.1
CDS CAA 72 bp TCTCTAAACACTATGGATGTTATTCATTTCCCATTTTaGAGTCGTTTTACTGGAGTCACAATTGGAGATGAA +
Preference number: 6 (lower is better)
Translates to: SLNTMDVIHFPF*SRFTGVTIGDE
Trigger: TTCATCTCCAATTGTGACTCCAGTAAAACGACTCAAAAATGGGAAATGAATAACATCCATAGTGTTTAGAGA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265000.9
ENST00000505308.5
ENST00000515862.1