Pregenerated sensors for GALNT3 (Homo sapiens)
Ensembl gene IDs: ENSG00000115339Ensembl transcript IDs: ENST00000392701.8, ENST00000409882.5, ENST00000412248.5, ENST00000422973.1, ENST00000431484.1, ENST00000437849.1, ENST00000463254.1
Found 76 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGGTTTGTTGAATTCAAACGTGTTCAGATCTATGGATGCAATATCTaGACTTACGACAGCCGTGTAGTTCTCAGCTATTCTGGCCAACAG | + |
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Preference number: 1 (lower is better) Translates to: RFVEFKRVQIYGCNI*TYDSRVVLSYSGQQ Trigger: CTGTTGGCCAGAATAGCTGAGAACTACACGGCTGTCGTAAGTCCAGATATTGCATCCATAGATCTGAACACGTTTGAATTCAACAAACCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000437849.1 |
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| 3UTR GCA 90 bp | ATAAGGAGAAGGTTTGTTGAATTCAAACGTGTTCAGATCTATGGATaGAATATCTGGACTTACGACAGCCGTGTAGTTCTCAGCTATTCT | + |
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Preference number: 1 (lower is better) Translates to: IRRRFVEFKRVQIYG*NIWTYDSRVVLSYS Trigger: AGAATAGCTGAGAACTACACGGCTGTCGTAAGTCCAGATATTGCATCCATAGATCTGAACACGTTTGAATTCAACAAACCTTCTCCTTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000437849.1 |
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| 3UTR TCA 90 bp | CAAAATTTCCACGGTTATGGTTACTTCCATAAGGAGAAGGTTTGTTaGATTCAAACGTGTTCAGATCTATGGATGCAATATCTGGACTTA | + |
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Preference number: 1 (lower is better) Translates to: QNFHGYGYFHKEKVC*IQTCSDLWMQYLDL Trigger: TAAGTCCAGATATTGCATCCATAGATCTGAACACGTTTGAATTCAACAAACCTTCTCCTTATGGAAGTAACCATAACCGTGGAAATTTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000437849.1 |
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| 3UTR-3UTR CCA 90 bp | CCAACAACAGAGCAAGGCATAATCTCCAACTGCCCACCACATTGCCATACTCTGACGTGTTCAGATCTATaGATGCAATATCTGGACTTA | + |
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Preference number: 2 (lower is better) Translates to: PTTEQGIISNCPPHCHTLTCSDL*MQYLDL Trigger: TAAGTCCAGATATTGCATCCATAGATCTGAACACGT...CAGAGTATGGCAATGTGGTGGGCAGTTGGAGATTATGCCTTGCTCTGTTGTTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000437849.1 |
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| 3UTR-3UTR CCA 90 bp | ACTCCAGTCAAAATTTCCACGGTTATGGTTACTTCCATAAGGAGAAGGTTTGTTAGTTCTCAGCTATTCTaGCCAACAGAGGTTCTAGCC | + |
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Preference number: 2 (lower is better) Translates to: TPVKISTVMVTSIRRRFVSSQLF*PTEVLA Trigger: GGCTAGAACCTCTGTTGGCCAGAATAGCTGAGAACT...AACAAACCTTCTCCTTATGGAAGTAACCATAACCGTGGAAATTTTGACTGGAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000437849.1 |
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| 3UTR-3UTR CAA 90 bp | GCGAACTTGGTTTCTAGCAATCACCTGAGTGCCTTTTGGAAAGCTATGAGGGCTTTCATCTTTCCTTCTTaGCTTCTCATGATCAGGAAG | + |
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Preference number: 3 (lower is better) Translates to: ANLVSSNHLSAFWKAMRAFIFPS*LLMIRK Trigger: CTTCCTGATCATGAGAAGCAAAGAAGGAAAGATGAA...AGCCCTCATAGCTTTCCAAAAGGCACTCAGGTGATTGCTAGAAACCAAGTTCGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000437849.1 |
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| 3UTR CCA 72 bp | GAATTCAAACGTGTTCAGATCTATGGATGCAATATCTaGACTTACGACAGCCGTGTAGTTCTCAGCTATTCT | + |
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Preference number: 3 (lower is better) Translates to: EFKRVQIYGCNI*TYDSRVVLSYS Trigger: AGAATAGCTGAGAACTACACGGCTGTCGTAAGTCCAGATATTGCATCCATAGATCTGAACACGTTTGAATTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000437849.1 |
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| 3UTR TCA 72 bp | CACGGTTATGGTTACTTCCATAAGGAGAAGGTTTGTTaGATTCAAACGTGTTCAGATCTATGGATGCAATAT | + |
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Preference number: 3 (lower is better) Translates to: HGYGYFHKEKVC*IQTCSDLWMQY Trigger: ATATTGCATCCATAGATCTGAACACGTTTGAATTCAACAAACCTTCTCCTTATGGAAGTAACCATAACCGTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000437849.1 |
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| CDS-3UTR GCA 90 bp | GCGAACTTGGTTTCTAGCAATCACCTGAGTGCCTTTTGGAAAGCTATGAGGGCTGGCATAATCTCCAACTaGCCACCACATTGCCATACT | + |
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Preference number: 4 (lower is better) Translates to: ANLVSSNHLSAFWKAMRAGIISN*PPHCHT Trigger: AGTATGGCAATGTGGTGGGCAGTTGGAGATTATGCC...AGCCCTCATAGCTTTCCAAAAGGCACTCAGGTGATTGCTAGAAACCAAGTTCGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000437849.1 |
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| CDS-3UTR CCA 90 bp | GACTTACGACAGCCGTGTAGTTCTCAGCTATTCTGGCCAACAGAGGTTCTAGCCTATGGATGCAATATCTaGACTTACGACAGCCGTGTA | + |
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Preference number: 4 (lower is better) Translates to: DLRQPCSSQLFWPTEVLAYGCNI*TYDSRV Trigger: TACACGGCTGTCGTAAGTCCAGATATTGCATCCATA...GGCTAGAACCTCTGTTGGCCAGAATAGCTGAGAACTACACGGCTGTCGTAAGTC 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000437849.1 |
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| CDS-3UTR GCA 90 bp | GCGAACTTGGTTTCTAGCAATCACCTGAGTGCCTTTTGGAAAGCTATGAGGGCTAGCTATGAGGGCTTTTaGTGCGAAAAACATGTCCAA | + |
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Preference number: 4 (lower is better) Translates to: ANLVSSNHLSAFWKAMRASYEGF*CEKHVQ Trigger: TTGGACATGTTTTTCGCAGCAAAAGCCCTCATAGCT...AGCCCTCATAGCTTTCCAAAAGGCACTCAGGTGATTGCTAGAAACCAAGTTCGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000437849.1 |
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| CDS-3UTR CCA 90 bp | TATCTGGACTTACGACAGCCGTGTAGTTCTCAGCTATTCTGGCCAACAGAGGTTAAACACTCACCTGCTTaGGCTGTCATTGCTATAATC | + |
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Preference number: 4 (lower is better) Translates to: YLDLRQPCSSQLFWPTEVKHSPA*AVIAII Trigger: GATTATAGCAATGACAGCCCAAGCAGGTGAGTGTTT...AACCTCTGTTGGCCAGAATAGCTGAGAACTACACGGCTGTCGTAAGTCCAGATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000437849.1 |
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| CDS-3UTR TCA 90 bp | ATCTATGGATGCAATATCTGGACTTACGACAGCCGTGTAGTTCTCAGCTATTCTCTAGCAACCGAGCAGTaGTCAGACCTTTTCTTTCTC | + |
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Preference number: 4 (lower is better) Translates to: IYGCNIWTYDSRVVLSYSLATEQ*SDLFFL Trigger: GAGAAAGAAAAGGTCTGATCACTGCTCGGTTGCTAG...AGAATAGCTGAGAACTACACGGCTGTCGTAAGTCCAGATATTGCATCCATAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000437849.1 |
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| CDS-3UTR GCA 90 bp | TCTAGCAATCACCTGAGTGCCTTTTGGAAAGCTATGAGGGCTTTTGCTGCGAAAATAGAAACACTCACCTaGTTGGGCTGTCATTGCTAT | + |
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Preference number: 4 (lower is better) Translates to: SSNHLSAFWKAMRAFAAKIETLT*LGCHCY Trigger: ATAGCAATGACAGCCCAAGCAGGTGAGTGTTTCTAT...TTTCGCAGCAAAAGCCCTCATAGCTTTCCAAAAGGCACTCAGGTGATTGCTAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000437849.1 |
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| CDS-3UTR CCA 90 bp | GAATTCAAACGTGTTCAGATCTATGGATGCAATATCTGGACTTACGACAGCCGTAGTTCTCAGCTATTCTaGCCAACAGAGGTTCTAGCC | + |
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Preference number: 4 (lower is better) Translates to: EFKRVQIYGCNIWTYDSRSSQLF*PTEVLA Trigger: GGCTAGAACCTCTGTTGGCCAGAATAGCTGAGAACT...ACGGCTGTCGTAAGTCCAGATATTGCATCCATAGATCTGAACACGTTTGAATTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000437849.1 |
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| CDS-3UTR CCA 90 bp | CATCTTTCCTTCTTTGCTTCTCATGATCAGGAAGCGACTCCCAGCCAAATGAAACACCTGAGTGCCTTTTaGAAAGCTATGAGGGCTTTT | + |
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Preference number: 4 (lower is better) Translates to: HLSFFASHDQEATPSQMKHLSAF*KAMRAF Trigger: AAAAGCCCTCATAGCTTTCCAAAAGGCACTCAGGTG...TTTCATTTGGCTGGGAGTCGCTTCCTGATCATGAGAAGCAAAGAAGGAAAGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000437849.1 |
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| CDS-3UTR TCA 90 bp | GAATTCAAACGTGTTCAGATCTATGGATGCAATATCTGGACTTACGACAGCCGTCGACTCCCAGCCAAATaGAAGACTCCAGTCAAAATT | + |
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Preference number: 4 (lower is better) Translates to: EFKRVQIYGCNIWTYDSRRLPAK*KTPVKI Trigger: AATTTTGACTGGAGTCTTTCATTTGGCTGGGAGTCG...ACGGCTGTCGTAAGTCCAGATATTGCATCCATAGATCTGAACACGTTTGAATTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000437849.1 |
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| CDS-3UTR GCA 90 bp | CTATGGATGCAATATCTGGACTTACGACAGCCGTGTAGTTCTCAGCTATTCTGGTATGAGGGCTTTTGCTaGGAAAAACATGTCCAACAA | + |
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Preference number: 4 (lower is better) Translates to: LWMQYLDLRQPCSSQLFWYEGFC*EKHVQQ Trigger: TTGTTGGACATGTTTTTCGCAGCAAAAGCCCTCATA...CCAGAATAGCTGAGAACTACACGGCTGTCGTAAGTCCAGATATTGCATCCATAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000437849.1 |
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| CDS-3UTR GCA 90 bp | CAAACGTGTTCAGATCTATGGATGCAATATCTGGACTTACGACAGCCGTGTAGTTGCTTGGGCTGTCATTaGTATAATCGCCAGTTGAAA | + |
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Preference number: 4 (lower is better) Translates to: QTCSDLWMQYLDLRQPCSCLGCH*YNRQLK Trigger: TTTCAACTGGCGATTATAGCAATGACAGCCCAAGCA...ACTACACGGCTGTCGTAAGTCCAGATATTGCATCCATAGATCTGAACACGTTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000437849.1 |
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| CDS-3UTR GCA 90 bp | ATCTATGGATGCAATATCTGGACTTACGACAGCCGTGTAGTTCTCAGCTATTCTAACTGCCCACCACATTaGCATACTCTGAAAGACATT | + |
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Preference number: 4 (lower is better) Translates to: IYGCNIWTYDSRVVLSYSNCPPH*HTLKDI Trigger: AATGTCTTTCAGAGTATGGCAATGTGGTGGGCAGTT...AGAATAGCTGAGAACTACACGGCTGTCGTAAGTCCAGATATTGCATCCATAGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000437849.1 |
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| CDS-3UTR CCA 90 bp | GTTCAGATCTATGGATGCAATATCTGGACTTACGACAGCCGTGTAGTTCTCAGCACGTGTTCAGATCTATaGATGCAATATCTGGACTTA | + |
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Preference number: 4 (lower is better) Translates to: VQIYGCNIWTYDSRVVLSTCSDL*MQYLDL Trigger: TAAGTCCAGATATTGCATCCATAGATCTGAACACGT...GCTGAGAACTACACGGCTGTCGTAAGTCCAGATATTGCATCCATAGATCTGAAC 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000437849.1 |
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| CDS-3UTR TCA 90 bp | TTTGTTGAATTCAAACGTGTTCAGATCTATGGATGCAATATCTGGACTTACGACCAGCAGTATTGCAGGTaGAGAATAGAGCACACTGTG | + |
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Preference number: 4 (lower is better) Translates to: FVEFKRVQIYGCNIWTYDQQYCR*RIEHTV Trigger: CACAGTGTGCTCTATTCTTCACCTGCAATACTGCTG...GTCGTAAGTCCAGATATTGCATCCATAGATCTGAACACGTTTGAATTCAACAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000437849.1 |
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| CDS-3UTR CCA 90 bp | CAAACGTGTTCAGATCTATGGATGCAATATCTGGACTTACGACAGCCGTGTAGTAGTGGGTGTTTTAATTaGGTAGGTTTCATCTTTCCT | + |
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Preference number: 4 (lower is better) Translates to: QTCSDLWMQYLDLRQPCSSGCFN*VGFIFP Trigger: AGGAAAGATGAAACCTACCCAATTAAAACACCCACT...ACTACACGGCTGTCGTAAGTCCAGATATTGCATCCATAGATCTGAACACGTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000437849.1 |
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| CDS-3UTR TCA 90 bp | TTTGTTGAATTCAAACGTGTTCAGATCTATGGATGCAATATCTGGACTTACGACGAGCATCTAAAAATGTaGGCGTTTCAGCTGTTGCGA | + |
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Preference number: 4 (lower is better) Translates to: FVEFKRVQIYGCNIWTYDEHLKM*AFQLLR Trigger: TCGCAACAGCTGAAACGCTCACATTTTTAGATGCTC...GTCGTAAGTCCAGATATTGCATCCATAGATCTGAACACGTTTGAATTCAACAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000437849.1 |
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| CDS CCA 90 bp | GGCGGCCGGGCAGGCGCTGGACGTGGGCTAGGCGCCAGGTGCAGGTaGCGGCGGCTGCGACTCCGGTTGCTGTCGCCACAGTTGCGGCTC | + |
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Preference number: 5 (lower is better) Translates to: GGRAGAGRGLGARCR*RRLRLRLLSPQLRL Trigger: GAGCCGCAACTGTGGCGACAGCAACCGGAGTCGCAGCCGCCGCCACCTGCACCTGGCGCCTAGCCCACGTCCAGCGCCTGCCCGGCCGCC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000392701.8 ENST00000422973.1 |
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| CDS GCA 90 bp | GGAAGCGGCGGCCGGGCAGGCGCTGGACGTGGGCTAGGCGCCAGGTaGAGGTGGCGGCGGCTGCGACTCCGGTTGCTGTCGCCACAGTTG | + |
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Preference number: 5 (lower is better) Translates to: GSGGRAGAGRGLGAR*RWRRLRLRLLSPQL Trigger: CAACTGTGGCGACAGCAACCGGAGTCGCAGCCGCCGCCACCTGCACCTGGCGCCTAGCCCACGTCCAGCGCCTGCCCGGCCGCCGCTTCC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000392701.8 ENST00000422973.1 |
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| CDS CCA 90 bp | CCTTGGATCGCGCGCGCAGGGTGGGGGCGCCGTCCGGGCCAAGCCTaGCTGTCGCGCGGCTTCTCTCTGAGTGGTCGGCGAGGCTGCTGC | + |
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Preference number: 5 (lower is better) Translates to: PWIARAGWGRRPGQA*LSRGFSLSGRRGCC Trigger: GCAGCAGCCTCGCCGACCACTCAGAGAGAAGCCGCGCGACAGCCAGGCTTGGCCCGGACGGCGCCCCCACCCTGCGCGCGCGATCCAAGG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000412248.5 |
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| CDS TCA 90 bp | GGGGGCGCCGTCCGGGCCAAGCCTGGCTGTCGCGCGGCTTCTCTCTaGGTGGTCGGCGAGGCTGCTGCTCCGCGCAAGTTGTGGCTCCCG | + |
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Preference number: 5 (lower is better) Translates to: GGAVRAKPGCRAASL*VVGEAAAPRKLWLP Trigger: CGGGAGCCACAACTTGCGCGGAGCAGCAGCCTCGCCGACCACTCAGAGAGAAGCCGCGCGACAGCCAGGCTTGGCCCGGACGGCGCCCCC 73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000412248.5 |
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| CDS CCA 90 bp | GCGCCGTCCGGGCCAAGCCTGGCTGTCGCGCGGCTTCTCTCTGAGTaGTCGGCGAGGCTGCTGCTCCGCGCAAGTTGTGGCTCCCGGCCC | + |
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Preference number: 5 (lower is better) Translates to: APSGPSLAVARLLSE*SARLLLRASCGSRP Trigger: GGGCCGGGAGCCACAACTTGCGCGGAGCAGCAGCCTCGCCGACCACTCAGAGAGAAGCCGCGCGACAGCCAGGCTTGGCCCGGACGGCGC 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000412248.5 |
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| CDS GCA 90 bp | GCCTGGCTGTCGCGCGGCTTCTCTCTGAGTGGTCGGCGAGGCTGCTaGTCCGCGCAAGTTGTGGCTCCCGGCCCATCTACATTGGAGGAA | + |
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Preference number: 5 (lower is better) Translates to: AWLSRGFSLSGRRGC*SAQVVAPGPSTLEE Trigger: TTCCTCCAATGTAGATGGGCCGGGAGCCACAACTTGCGCGGAGCAGCAGCCTCGCCGACCACTCAGAGAGAAGCCGCGCGACAGCCAGGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000412248.5 |
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| CDS GCA 90 bp | CAAGCCTGGCTGTCGCGCGGCTTCTCTCTGAGTGGTCGGCGAGGCTaGTGCTCCGCGCAAGTTGTGGCTCCCGGCCCATCTACATTGGAG | + |
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Preference number: 5 (lower is better) Translates to: QAWLSRGFSLSGRRG*CSAQVVAPGPSTLE Trigger: CTCCAATGTAGATGGGCCGGGAGCCACAACTTGCGCGGAGCAGCAGCCTCGCCGACCACTCAGAGAGAAGCCGCGCGACAGCCAGGCTTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000412248.5 |
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| CDS GCA 90 bp | CCACACGGTTCCTCCCTTCCTCCTCGGTTCGCCAAAATGAAGGGGTaGGCTGCCTCCGAGGACCACTTCGGGAGGGCAGCAACTGCTGGC | + |
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Preference number: 5 (lower is better) Translates to: PHGSSLPPRFAKMKG*AASEDHFGRAATAG Trigger: GCCAGCAGTTGCTGCCCTCCCGAAGTGGTCCTCGGAGGCAGCGCACCCCTTCATTTTGGCGAACCGAGGAGGAAGGGAGGAACCGTGTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000412248.5 |
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| CDS GCA 90 bp | CGGTTCCTCCCTTCCTCCTCGGTTCGCCAAAATGAAGGGGTGCGCTaGCTCCGAGGACCACTTCGGGAGGGCAGCAACTGCTGGCTCATG | + |
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Preference number: 5 (lower is better) Translates to: RFLPSSSVRQNEGVR*LRGPLREGSNCWLM Trigger: CATGAGCCAGCAGTTGCTGCCCTCCCGAAGTGGTCCTCGGAGGCAGCGCACCCCTTCATTTTGGCGAACCGAGGAGGAAGGGAGGAACCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000412248.5 |
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| CDS TCA 90 bp | CCGGCCCATCTACATTGGAGGAATCCTGCACTGACCTGGTGGCAGTaGTCACCTTGTAGCCAGAACACAGTCTGCTGGGTCCTTGGGGAA | + |
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Preference number: 5 (lower is better) Translates to: PAHLHWRNPALTWWQ*SPCSQNTVCWVLGE Trigger: TTCCCCAAGGACCCAGCAGACTGTGTTCTGGCTACAAGGTGATCACTGCCACCAGGTCAGTGCAGGATTCCTCCAATGTAGATGGGCCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000412248.5 |
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| CDS TCA 90 bp | GCAAGTTGTGGCTCCCGGCCCATCTACATTGGAGGAATCCTGCACTaGCCTGGTGGCAGTGATCACCTTGTAGCCAGAACACAGTCTGCT | + |
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Preference number: 5 (lower is better) Translates to: ASCGSRPIYIGGILH*PGGSDHLVARTQSA Trigger: AGCAGACTGTGTTCTGGCTACAAGGTGATCACTGCCACCAGGTCAGTGCAGGATTCCTCCAATGTAGATGGGCCGGGAGCCACAACTTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000412248.5 |
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| CDS-3UTR CAA 90 bp | GACTTACGACAGCCGTGTAGTTCTCAGCTATTCTGGCCAACAGAGGTTCTAGCCTTCTGCAAGGCGAACTaGGTTTCTAGCAATCACCTG | + |
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Preference number: 5 (lower is better) Translates to: DLRQPCSSQLFWPTEVLAFCKAN*VSSNHL Trigger: CAGGTGATTGCTAGAAACCAAGTTCGCCTTGCAGAA...GGCTAGAACCTCTGTTGGCCAGAATAGCTGAGAACTACACGGCTGTCGTAAGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000437849.1 |
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| CDS-3UTR CAA 90 bp | GAATTCAAACGTGTTCAGATCTATGGATGCAATATCTGGACTTACGACAGCCGTCAGCTGTTGCGACTGTaGCTCCTAGCAACCGAGCAG | + |
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Preference number: 5 (lower is better) Translates to: EFKRVQIYGCNIWTYDSRQLLRL*LLATEQ Trigger: CTGCTCGGTTGCTAGGAGCAACAGTCGCAACAGCTG...ACGGCTGTCGTAAGTCCAGATATTGCATCCATAGATCTGAACACGTTTGAATTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000437849.1 |
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| CDS GCA 90 bp | TCGAGTGTCTGGTCCAAGATCTCGGTGCAAAGAAATCCTGTCACTTaGGAAAGCATTAAAGCAGTGTTTAGCTTCCCCACGTTCCTTTTC | + |
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Preference number: 5 (lower is better) Translates to: SSVWSKISVQRNPVT*ESIKAVFSFPTFLF Trigger: GAAAAGGAACGTGGGGAAGCTAAACACTGCTTTAATGCTTTCGCAAGTGACAGGATTTCTTTGCACCGAGATCTTGGACCAGACACTCGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000392701.8 ENST00000412248.5 |
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| CDS-3UTR CAA 90 bp | CCAACAACAGAGCAAGGCATAATCTCCAACTGCCCACCACATTGCCATACTCTGTGCTATAATCGCCAGTaGAAAACGAGTGAGCATCTA | + |
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Preference number: 5 (lower is better) Translates to: PTTEQGIISNCPPHCHTLCYNRQ*KTSEHL Trigger: TAGATGCTCACTCGTTTTCAACTGGCGATTATAGCA...CAGAGTATGGCAATGTGGTGGGCAGTTGGAGATTATGCCTTGCTCTGTTGTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000437849.1 |
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| CDS TCA 90 bp | TGTATAGAAGTTGATCCTTCTGGATCTCCCATATCTGCTCTCCAGTaGCAACTGTCTTGTGACCTTTGTAGGTACATGCCTTCAGCTGAA | + |
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Preference number: 5 (lower is better) Translates to: CIEVDPSGSPISALQ*QLSCDLCRYMPSAE Trigger: TTCAGCTGAAGGCATGTACCTACAAAGGTCACAAGACAGTTGTCACTGGAGAGCAGATATGGGAGATCCAGAAGGATCAACTTCTATACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000392701.8 ENST00000409882.5 |
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| CDS-3UTR CAA 90 bp | ATCTATGGATGCAATATCTGGACTTACGACAGCCGTGTAGTTCTCAGCTATTCTTCACCTGAGTGCCTTTaGGAAAGCTATGAGGGCTTT | + |
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Preference number: 5 (lower is better) Translates to: IYGCNIWTYDSRVVLSYSSPECL*ESYEGF Trigger: AAAGCCCTCATAGCTTTCCAAAAGGCACTCAGGTGA...AGAATAGCTGAGAACTACACGGCTGTCGTAAGTCCAGATATTGCATCCATAGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000437849.1 |
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| CDS GCA 90 bp | TGTTCAATACATTCAGGAGGTCGAGTGTCTGGTCCAAGATCTCGGTaGAAAGAAATCCTGTCACTTGCGAAAGCATTAAAGCAGTGTTTA | + |
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Preference number: 5 (lower is better) Translates to: CSIHSGGRVSGPRSR*KEILSLAKALKQCL Trigger: TAAACACTGCTTTAATGCTTTCGCAAGTGACAGGATTTCTTTGCACCGAGATCTTGGACCAGACACTCGACCTCCTGAATGTATTGAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000392701.8 ENST00000412248.5 |
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| CDS TCA 90 bp | CACGTTCCTTTTCCTTTTGCTCTTCAACACTTAAATTGGTTGTCTTaGATGCTTTACCAGAAGCACCAGGTGCATTTGAATCCTGAGGTG | + |
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Preference number: 5 (lower is better) Translates to: HVPFPFALQHLNWLS*MLYQKHQVHLNPEV Trigger: CACCTCAGGATTCAAATGCACCTGGTGCTTCTGGTAAAGCATTCAAGACAACCAATTTAAGTGTTGAAGAGCAAAAGGAAAAGGAACGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000392701.8 ENST00000412248.5 |
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| CDS GCA 90 bp | TTGCAAACAAGGTCTCTCACCAGCATCAATGTTTTGCCTGACAGGTaGTCCTATTTGCATTTTTGGCATGGCATCCTTAATATTGTTTAC | + |
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Preference number: 5 (lower is better) Translates to: LQTRSLTSINVLPDR*SYLHFWHGILNIVY Trigger: GTAAACAATATTAAGGATGCCATGCCAAAAATGCAAATAGGAGCACCTGTCAGGCAAAACATTGATGCTGGTGAGAGACCTTGTTTGCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000392701.8 ENST00000412248.5 |
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| CDS-3UTR CAA 90 bp | ATCTATGGATGCAATATCTGGACTTACGACAGCCGTGTAGTTCTCAGCTATTCTTTCATCTTTCCTTCTTaGCTTCTCATGATCAGGAAG | + |
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Preference number: 5 (lower is better) Translates to: IYGCNIWTYDSRVVLSYSFIFPS*LLMIRK Trigger: CTTCCTGATCATGAGAAGCAAAGAAGGAAAGATGAA...AGAATAGCTGAGAACTACACGGCTGTCGTAAGTCCAGATATTGCATCCATAGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000437849.1 |
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| CDS GCA 90 bp | CATTTTTGGAGTGGATCTGATGGGTTGCATGACACTAAACTTGGATaGTCTCCATTTGCTGAAAGGCACATTTTTAAGAATGGATTGTAT | + |
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Preference number: 5 (lower is better) Translates to: HFWSGSDGLHDTKLG*SPFAERHIFKNGLY Trigger: ATACAATCCATTCTTAAAAATGTGCCTTTCAGCAAATGGAGAGCATCCAAGTTTAGTGTCATGCAACCCATCAGATCCACTCCAAAAATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000392701.8 ENST00000409882.5 |
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| CDS CCA 90 bp | CTGACCAACGCTTTTAATGTATCCAGATATAACAGGATTAAGGTCTaGCACATACACCTCTGGATAAATGTTGTTCAGATACCATGTAAA | + |
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Preference number: 5 (lower is better) Translates to: LTNAFNVSRYNRIKV*HIHLWINVVQIPCK Trigger: TTTACATGGTATCTGAACAACATTTATCCAGAGGTGTATGTGCCAGACCTTAATCCTGTTATATCTGGATACATTAAAAGCGTTGGTCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000392701.8 ENST00000409882.5 |
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| CDS GCA 72 bp | GGCGGCGGCTGCGACTCCGGTTGCTGTCGCCACAGTTaGGGCTCAGTAGAGCTCCTCCTCCGCCGCCGCCTC | + |
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Preference number: 6 (lower is better) Translates to: GGGCDSGCCRHS*GSVELLLRRRL Trigger: GAGGCGGCGGCGGAGGAGGAGCTCTACTGAGCCGCAACTGTGGCGACAGCAACCGGAGTCGCAGCCGCCGCC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000392701.8 ENST00000422973.1 |
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| CDS CAA 72 bp | TGGCGGCGGCTGCGACTCCGGTTGCTGTCGCCACAGTaGCGGCTCAGTAGAGCTCCTCCTCCGCCGCCGCCT | + |
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Preference number: 6 (lower is better) Translates to: WRRLRLRLLSPQ*RLSRAPPPPPP Trigger: AGGCGGCGGCGGAGGAGGAGCTCTACTGAGCCGCAACTGTGGCGACAGCAACCGGAGTCGCAGCCGCCGCCA 71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000392701.8 ENST00000422973.1 |
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| CDS TCA 72 bp | GTCCGGGCCAAGCCTGGCTGTCGCGCGGCTTCTCTCTaGGTGGTCGGCGAGGCTGCTGCTCCGCGCAAGTTG | + |
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Preference number: 6 (lower is better) Translates to: VRAKPGCRAASL*VVGEAAAPRKL Trigger: CAACTTGCGCGGAGCAGCAGCCTCGCCGACCACTCAGAGAGAAGCCGCGCGACAGCCAGGCTTGGCCCGGAC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000412248.5 |
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| CDS CCA 72 bp | GGGCCAAGCCTGGCTGTCGCGCGGCTTCTCTCTGAGTaGTCGGCGAGGCTGCTGCTCCGCGCAAGTTGTGGC | + |
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Preference number: 6 (lower is better) Translates to: GPSLAVARLLSE*SARLLLRASCG Trigger: GCCACAACTTGCGCGGAGCAGCAGCCTCGCCGACCACTCAGAGAGAAGCCGCGCGACAGCCAGGCTTGGCCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000412248.5 |
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| CDS GCA 72 bp | CTGTCGCGCGGCTTCTCTCTGAGTGGTCGGCGAGGCTaGTGCTCCGCGCAAGTTGTGGCTCCCGGCCCATCT | + |
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Preference number: 6 (lower is better) Translates to: LSRGFSLSGRRG*CSAQVVAPGPS Trigger: AGATGGGCCGGGAGCCACAACTTGCGCGGAGCAGCAGCCTCGCCGACCACTCAGAGAGAAGCCGCGCGACAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000412248.5 |
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| CDS GCA 72 bp | TCGCGCGGCTTCTCTCTGAGTGGTCGGCGAGGCTGCTaGTCCGCGCAAGTTGTGGCTCCCGGCCCATCTACA | + |
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Preference number: 6 (lower is better) Translates to: SRGFSLSGRRGC*SAQVVAPGPST Trigger: TGTAGATGGGCCGGGAGCCACAACTTGCGCGGAGCAGCAGCCTCGCCGACCACTCAGAGAGAAGCCGCGCGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000412248.5 |
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| CDS GCA 72 bp | CCTTCCTCCTCGGTTCGCCAAAATGAAGGGGTGCGCTaGCTCCGAGGACCACTTCGGGAGGGCAGCAACTGC | + |
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Preference number: 6 (lower is better) Translates to: PSSSVRQNEGVR*LRGPLREGSNC Trigger: GCAGTTGCTGCCCTCCCGAAGTGGTCCTCGGAGGCAGCGCACCCCTTCATTTTGGCGAACCGAGGAGGAAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000412248.5 ENST00000431484.1 |
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| CDS TCA 72 bp | CACACGGTTCCTCCCTTCCTCCTCGGTTCGCCAAAATaGAGGGGTGCGCTGCCTCCGAGGACCACTTCGGGA | + |
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Preference number: 6 (lower is better) Translates to: HTVPPFLLGSPK*RGALPPRTTSG Trigger: TCCCGAAGTGGTCCTCGGAGGCAGCGCACCCCTTCATTTTGGCGAACCGAGGAGGAAGGGAGGAACCGTGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000412248.5 ENST00000431484.1 |
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| CDS TCA 72 bp | GGCTCCCGGCCCATCTACATTGGAGGAATCCTGCACTaGCCTGGTGGCAGTGATCACCTTGTAGCCAGAACA | + |
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Preference number: 6 (lower is better) Translates to: GSRPIYIGGILH*PGGSDHLVART Trigger: TGTTCTGGCTACAAGGTGATCACTGCCACCAGGTCAGTGCAGGATTCCTCCAATGTAGATGGGCCGGGAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000412248.5 |
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| CDS TCA 72 bp | CTACATTGGAGGAATCCTGCACTGACCTGGTGGCAGTaGTCACCTTGTAGCCAGAACACAGTCTGCTGGGTC | + |
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Preference number: 6 (lower is better) Translates to: LHWRNPALTWWQ*SPCSQNTVCWV Trigger: GACCCAGCAGACTGTGTTCTGGCTACAAGGTGATCACTGCCACCAGGTCAGTGCAGGATTCCTCCAATGTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000412248.5 |
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| CDS TCA 72 bp | AATGCTTTACCAGAAGCACCAGGTGCATTTGAATCCTaGGGTGGACGGTCAAGGACAGGCTTCAATTCTGCT | + |
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Preference number: 6 (lower is better) Translates to: NALPEAPGAFES*GGRSRTGFNSA Trigger: AGCAGAATTGAAGCCTGTCCTTGACCGTCCACCTCAGGATTCAAATGCACCTGGTGCTTCTGGTAAAGCATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000392701.8 ENST00000412248.5 |
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| CDS TCA 72 bp | TGTCTTGAATGCTTTACCAGAAGCACCAGGTGCATTTaGATCCTGAGGTGGACGGTCAAGGACAGGCTTCAA | + |
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Preference number: 6 (lower is better) Translates to: CLECFTRSTRCI*ILRWTVKDRLQ Trigger: TTGAAGCCTGTCCTTGACCGTCCACCTCAGGATTCAAATGCACCTGGTGCTTCTGGTAAAGCATTCAAGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000392701.8 ENST00000412248.5 |
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| CDS GCA 72 bp | CTGAGGTGGACGGTCAAGGACAGGCTTCAATTCTGCTaGTGTATAATATCCTTGCAAACAAGGTCTCTCACC | + |
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Preference number: 6 (lower is better) Translates to: LRWTVKDRLQFC*CIISLQTRSLT Trigger: GGTGAGAGACCTTGTTTGCAAGGATATTATACAGCAGCAGAATTGAAGCCTGTCCTTGACCGTCCACCTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000392701.8 ENST00000412248.5 |
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| CDS GCA 72 bp | TCCAGTGACAACTGTCTTGTGACCTTTGTAGGTACATaGCTTCAGCTGAACGAGACCTTGAGCAGCATGAAG | + |
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Preference number: 6 (lower is better) Translates to: SSDNCLVTFVGT*LQLNETLSSMK Trigger: CTTCATGCTGCTCAAGGTCTCGTTCAGCTGAAGGCATGTACCTACAAAGGTCACAAGACAGTTGTCACTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000392701.8 ENST00000409882.5 |
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| CDS CAA 90 bp | TGGACGGTCAAGGACAGGCTTCAATTCTGCTGCTGTATAATATCCTaGCAAACAAGGTCTCTCACCAGCATCAATGTTTTGCCTGACAGG | + |
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Preference number: 6 (lower is better) Translates to: WTVKDRLQFCCCIIS*QTRSLTSINVLPDR Trigger: CCTGTCAGGCAAAACATTGATGCTGGTGAGAGACCTTGTTTGCAAGGATATTATACAGCAGCAGAATTGAAGCCTGTCCTTGACCGTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000392701.8 ENST00000412248.5 |
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| CDS TCA 72 bp | GTTGATCCTTCTGGATCTCCCATATCTGCTCTCCAGTaGCAACTGTCTTGTGACCTTTGTAGGTACATGCCT | + |
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Preference number: 6 (lower is better) Translates to: VDPSGSPISALQ*QLSCDLCRYMP Trigger: AGGCATGTACCTACAAAGGTCACAAGACAGTTGTCACTGGAGAGCAGATATGGGAGATCCAGAAGGATCAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000392701.8 ENST00000409882.5 |
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| CDS GCA 72 bp | ATCCTGAGGTGGACGGTCAAGGACAGGCTTCAATTCTaGTGCTGTATAATATCCTTGCAAACAAGGTCTCTC | + |
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Preference number: 6 (lower is better) Translates to: ILRWTVKDRLQF*CCIISLQTRSL Trigger: GAGAGACCTTGTTTGCAAGGATATTATACAGCAGCAGAATTGAAGCCTGTCCTTGACCGTCCACCTCAGGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000392701.8 ENST00000412248.5 |
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| CDS GCA 72 bp | CATTCAGGAGGTCGAGTGTCTGGTCCAAGATCTCGGTaGAAAGAAATCCTGTCACTTGCGAAAGCATTAAAG | + |
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Preference number: 6 (lower is better) Translates to: HSGGRVSGPRSR*KEILSLAKALK Trigger: CTTTAATGCTTTCGCAAGTGACAGGATTTCTTTGCACCGAGATCTTGGACCAGACACTCGACCTCCTGAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000392701.8 ENST00000412248.5 |
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| CDS TCA 72 bp | AATCGCCAGTTGAAAACGAGTGAGCATCTAAAAATGTaGGCGTTTCAGCTGTTGCGACTGTTGCTCCTAGCA | + |
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Preference number: 6 (lower is better) Translates to: NRQLKTSEHLKM*AFQLLRLLLLA Trigger: TGCTAGGAGCAACAGTCGCAACAGCTGAAACGCTCACATTTTTAGATGCTCACTCGTTTTCAACTGGCGATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000437849.1 |
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| CDS GCA 72 bp | CCTTGCAAACAAGGTCTCTCACCAGCATCAATGTTTTaGCTGACAGGTGCTCCTATTTGCATTTTTGGCATG | + |
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Preference number: 6 (lower is better) Translates to: PCKQGLSPASMF*LTGAPICIFGM Trigger: CATGCCAAAAATGCAAATAGGAGCACCTGTCAGGCAAAACATTGATGCTGGTGAGAGACCTTGTTTGCAAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000392701.8 ENST00000412248.5 |
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| CDS GCA 72 bp | CCAACCATAGAAACACTCACCTGCTTGGGCTGTCATTaGTATAATCGCCAGTTGAAAACGAGTGAGCATCTA | + |
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Preference number: 6 (lower is better) Translates to: PTIETLTCLGCH*YNRQLKTSEHL Trigger: TAGATGCTCACTCGTTTTCAACTGGCGATTATAGCAATGACAGCCCAAGCAGGTGAGTGTTTCTATGGTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000437849.1 |
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| CDS TCA 72 bp | AACCATAGAAACACTCACAGTGAGCATCTAAAAATGTaGGCGTTTCAGCTGTTGCGACTGTTGCTCCTAGCA | + |
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Preference number: 6 (lower is better) Translates to: NHRNTHSEHLKM*AFQLLRLLLLA Trigger: TGCTAGGAGCAACAGTCGCAACAGCTGAAACGCTCACATTTTTAGATGCTCACTGTGAGTGTTTCTATGGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000392701.8 ENST00000412248.5 ENST00000463254.1 |
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| CDS CAA 72 bp | TGGCTAAGTATCCATTTTTGGAGTGGATCTGATGGGTaGCATGACACTAAACTTGGATGCTCTCCATTTGCT | + |
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Preference number: 6 (lower is better) Translates to: WLSIHFWSGSDG*HDTKLGCSPFA Trigger: AGCAAATGGAGAGCATCCAAGTTTAGTGTCATGCAACCCATCAGATCCACTCCAAAAATGGATACTTAGCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000392701.8 ENST00000409882.5 |
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| CDS TCA 72 bp | CATAATTCCTTCTGGATGTTGTGCCGAATTTCATGTTaGGCAGAGTATTCAAAGTACTGGTTTCCCCCAAGT | + |
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Preference number: 6 (lower is better) Translates to: HNSFWMLCRISC*AEYSKYWFPPS Trigger: ACTTGGGGGAAACCAGTACTTTGAATACTCTGCTCAACATGAAATTCGGCACAACATCCAGAAGGAATTATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000392701.8 ENST00000409882.5 |
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| CDS CCA 72 bp | AAATTTTTGTTCAATACATTCAGGAGGTCGAGTGTCTaGTCCAAGATCTCGGTGCAAAGAAATCCTGTCACT | + |
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Preference number: 6 (lower is better) Translates to: KFLFNTFRRSSV*SKISVQRNPVT Trigger: AGTGACAGGATTTCTTTGCACCGAGATCTTGGACCAGACACTCGACCTCCTGAATGTATTGAACAAAAATTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000392701.8 ENST00000412248.5 |
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| CDS CAA 72 bp | TTTGGAGTGGATCTGATGGGTTGCATGACACTAAACTaGGATGCTCTCCATTTGCTGAAAGGCACATTTTTA | + |
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Preference number: 6 (lower is better) Translates to: FGVDLMGCMTLN*DALHLLKGTFL Trigger: TAAAAATGTGCCTTTCAGCAAATGGAGAGCATCCAAGTTTAGTGTCATGCAACCCATCAGATCCACTCCAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000392701.8 ENST00000409882.5 |
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| CDS CAA 90 bp | GTATCCATTTTTGGAGTGGATCTGATGGGTTGCATGACACTAAACTaGGATGCTCTCCATTTGCTGAAAGGCACATTTTTAAGAATGGAT | + |
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Preference number: 6 (lower is better) Translates to: VSIFGVDLMGCMTLN*DALHLLKGTFLRMD Trigger: ATCCATTCTTAAAAATGTGCCTTTCAGCAAATGGAGAGCATCCAAGTTTAGTGTCATGCAACCCATCAGATCCACTCCAAAAATGGATAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000392701.8 ENST00000409882.5 |
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| CDS GCA 72 bp | AGTGGATCTGATGGGTTGCATGACACTAAACTTGGATaGTCTCCATTTGCTGAAAGGCACATTTTTAAGAAT | + |
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Preference number: 6 (lower is better) Translates to: SGSDGLHDTKLG*SPFAERHIFKN Trigger: ATTCTTAAAAATGTGCCTTTCAGCAAATGGAGAGCATCCAAGTTTAGTGTCATGCAACCCATCAGATCCACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000392701.8 ENST00000409882.5 |
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| CDS CAA 90 bp | GTGGATCTGATGGGTTGCATGACACTAAACTTGGATGCTCTCCATTaGCTGAAAGGCACATTTTTAAGAATGGATTGTATAGAAGTTGAT | + |
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Preference number: 6 (lower is better) Translates to: VDLMGCMTLNLDALH*LKGTFLRMDCIEVD Trigger: ATCAACTTCTATACAATCCATTCTTAAAAATGTGCCTTTCAGCAAATGGAGAGCATCCAAGTTTAGTGTCATGCAACCCATCAGATCCAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000392701.8 ENST00000409882.5 |
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