RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GALNT17 (Homo sapiens)

Ensembl gene IDs: ENSG00000185274

Ensembl transcript IDs: ENST00000333538.10, ENST00000467723.1, ENST00000498380.6, ENST00000618959.1

Found 401 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTGGCAGCCTTTGCTTCAGCCCTTAGGTTCTGGATGGAGGACCGCTaGTTCTCCCCGGTGGCAGCCTCTGGGAGTCAGGGCTCCCTGGTC +
Preference number: 1 (lower is better)
Translates to: LAAFASALRFWMEDR*FSPVAASGSQGSLV
Trigger: GACCAGGGAGCCCTGACTCCCAGAGGCTGCCACCGGGGAGAAGCAGCGGTCCTCCATCCAGAACCTAAGGGCTGAAGCAAAGGCTGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
3UTR CCA 90 bp CTTCAAGGGTCCTGGCAGCCTTTGCTTCAGCCCTTAGGTTCTGGATaGAGGACCGCTGCTTCTCCCCGGTGGCAGCCTCTGGGAGTCAGG +
Preference number: 1 (lower is better)
Translates to: LQGSWQPLLQPLGSG*RTAASPRWQPLGVR
Trigger: CCTGACTCCCAGAGGCTGCCACCGGGGAGAAGCAGCGGTCCTCCATCCAGAACCTAAGGGCTGAAGCAAAGGCTGCCAGGACCCTTGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
3UTR CCA 90 bp GCATCTTCAAGGGTCCTGGCAGCCTTTGCTTCAGCCCTTAGGTTCTaGATGGAGGACCGCTGCTTCTCCCCGGTGGCAGCCTCTGGGAGT +
Preference number: 1 (lower is better)
Translates to: ASSRVLAAFASALRF*MEDRCFSPVAASGS
Trigger: ACTCCCAGAGGCTGCCACCGGGGAGAAGCAGCGGTCCTCCATCCAGAACCTAAGGGCTGAAGCAAAGGCTGCCAGGACCCTTGAAGATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
3UTR TCA 90 bp GCTACCCTGGTGGGAAGGGTTAGGGGCAGTAGCTGCCTTGGGGCGTaGACAGGCAGGTGTCATCTGGGTAGAAGTAACCTCGGAGGAAAT +
Preference number: 1 (lower is better)
Translates to: ATLVGRVRGSSCLGA*TGRCHLGRSNLGGN
Trigger: ATTTCCTCCGAGGTTACTTCTACCCAGATGACACCTGCCTGTTCACGCCCCAAGGCAGCTACTGCCCCTAACCCTTCCCACCAGGGTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
3UTR TCA 90 bp CTGCCTTCTCCTCTGCCAGCCAGCAGAGCGTGGGGTGAAATGAGGTaGGCCAAAAGCATCTTCAAGGGTCCTGGCAGCCTTTGCTTCAGC +
Preference number: 1 (lower is better)
Translates to: LPSPLPASRAWGEMR*AKSIFKGPGSLCFS
Trigger: GCTGAAGCAAAGGCTGCCAGGACCCTTGAAGATGCTTTTGGCTCACCTCATTTCACCCCACGCTCTGCTGGCTGGCAGAGGAGAAGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
3UTR TCA 90 bp ATGGGGCCAAACCCACACCCTTCTCATCCCTCGTCCCCATCCAGGTaGGTAATGAAGCAGCAAGCCCAAGGCCACACAGCTAGGTCAGCA +
Preference number: 1 (lower is better)
Translates to: MGPNPHPSHPSSPSR*VMKQQAQGHTARSA
Trigger: TGCTGACCTAGCTGTGTGGCCTTGGGCTTGCTGCTTCATTACTCACCTGGATGGGGACGAGGGATGAGAAGGGTGTGGGTTTGGCCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
3UTR TCA 90 bp AACGACTGCCTTCTCCTCTGCCAGCCAGCAGAGCGTGGGGTGAAATaGGGTGAGCCAAAAGCATCTTCAAGGGTCCTGGCAGCCTTTGCT +
Preference number: 1 (lower is better)
Translates to: NDCLLLCQPAERGVK*GEPKASSRVLAAFA
Trigger: AGCAAAGGCTGCCAGGACCCTTGAAGATGCTTTTGGCTCACCTCATTTCACCCCACGCTCTGCTGGCTGGCAGAGGAGAAGGCAGTCGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
3UTR CCA 90 bp AGACACAGGAGGGGACCCTGCCAGTCCCAGATCCTGATTCTGGGATaGGAGATGTGGAGGAGAACTGGACAGTCTTGCTCCTCAGTACCA +
Preference number: 1 (lower is better)
Translates to: RHRRGPCQSQILILG*EMWRRTGQSCSSVP
Trigger: TGGTACTGAGGAGCAAGACTGTCCAGTTCTCCTCCACATCTCCCATCCCAGAATCAGGATCTGGGACTGGCAGGGTCCCCTCCTGTGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
3UTR CCA 90 bp TTAGGGGCAGTAGCTGCCTTGGGGCGTGAACAGGCAGGTGTCATCTaGGTAGAAGTAACCTCGGAGGAAATAGTGCCTGGTCCTCACTGC +
Preference number: 1 (lower is better)
Translates to: LGAVAALGREQAGVI*VEVTSEEIVPGPHC
Trigger: GCAGTGAGGACCAGGCACTATTTCCTCCGAGGTTACTTCTACCCAGATGACACCTGCCTGTTCACGCCCCAAGGCAGCTACTGCCCCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
3UTR CCA 90 bp CCAGTCCCAGATCCTGATTCTGGGATGGGAGATGTGGAGGAGAACTaGACAGTCTTGCTCCTCAGTACCAGGTCCACATCAGAGGCTGTG +
Preference number: 1 (lower is better)
Translates to: PVPDPDSGMGDVEEN*TVLLLSTRSTSEAV
Trigger: CACAGCCTCTGATGTGGACCTGGTACTGAGGAGCAAGACTGTCCAGTTCTCCTCCACATCTCCCATCCCAGAATCAGGATCTGGGACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
3UTR GCA 90 bp ATCCTGATTCTGGGATGGGAGATGTGGAGGAGAACTGGACAGTCTTaGTCCTCAGTACCAGGTCCACATCAGAGGCTGTGGAAGACAGCT +
Preference number: 1 (lower is better)
Translates to: ILILGWEMWRRTGQS*SSVPGPHQRLWKTA
Trigger: AGCTGTCTTCCACAGCCTCTGATGTGGACCTGGTACTGAGGAGCAAGACTGTCCAGTTCTCCTCCACATCTCCCATCCCAGAATCAGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
3UTR TCA 90 bp GCTAACATGTATTTATTCCACAAGGTGGGAGATGGGGTGAGGAGATaGTCACCAGTAAGACGTCACCAAATGAGACACTGCGAATCCCAC +
Preference number: 1 (lower is better)
Translates to: ANMYLFHKVGDGVRR*SPVRRHQMRHCESH
Trigger: GTGGGATTCGCAGTGTCTCATTTGGTGACGTCTTACTGGTGATCATCTCCTCACCCCATCTCCCACCTTGTGGAATAAATACATGTTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
3UTR-3UTR GCA 90 bp AGGTTCTGGATGGAGGACCGCTGCTTCTCCCCGGTGGCAGCCTCTGGGAGTCAGCACCTGCCGGCCCCTTaGTGTCTCTCCGCCAGGGCA +
Preference number: 2 (lower is better)
Translates to: RFWMEDRCFSPVAASGSQHLPAP*CLSARA
Trigger: TGCCCTGGCGGAGAGACAGCAAGGGGCCGGCAGGTG...CTGACTCCCAGAGGCTGCCACCGGGGAGAAGCAGCGGTCCTCCATCCAGAACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
3UTR-3UTR GCA 90 bp ATGGGACAGCCTCCCATCGGGGGCACCCCACAGGGCAGGGCTGAGACACATCCTCATCCGGGGTCCCTGTaGTGCCCTGGAGAAGCCCTG +
Preference number: 2 (lower is better)
Translates to: MGQPPIGGTPQGRAETHPHPGSL*CPGEAL
Trigger: CAGGGCTTCTCCAGGGCAGCACAGGGACCCCGGATG...AGGATGTGTCTCAGCCCTGCCCTGTGGGGTGCCCCCGATGGGAGGCTGTCCCAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
3UTR-3UTR GCA 90 bp ATGGGACAGCCTCCCATCGGGGGCACCCCACAGGGCAGGGCTGAGACACATCCTGACTGCCTTCTCCTCTaGCAGCCAGCAGAGCGTGGG +
Preference number: 2 (lower is better)
Translates to: MGQPPIGGTPQGRAETHPDCLLL*QPAERG
Trigger: CCCACGCTCTGCTGGCTGGCAGAGGAGAAGGCAGTC...AGGATGTGTCTCAGCCCTGCCCTGTGGGGTGCCCCCGATGGGAGGCTGTCCCAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
3UTR-3UTR TCA 90 bp ATGGGACAGCCTCCCATCGGGGGCACCCCACAGGGCAGGGCTGAGACACATCCTTGCCTCCCACCGTGTTaGTGGCTGGAGTTCAGCAGC +
Preference number: 2 (lower is better)
Translates to: MGQPPIGGTPQGRAETHPCLPPC*WLEFSS
Trigger: GCTGCTGAACTCCAGCCATCAACACGGTGGGAGGCA...AGGATGTGTCTCAGCCCTGCCCTGTGGGGTGCCCCCGATGGGAGGCTGTCCCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
3UTR-3UTR GCA 90 bp GAGAGGAAACGACTGCCTTCTCCTCTGCCAGCCAGCAGAGCGTGGGGTGAAATGCCGGGGTCCCTGTGCTaGCCTGGAGAAGCCCTGGGG +
Preference number: 2 (lower is better)
Translates to: ERKRLPSPLPASRAWGEMPGSLC*PGEALG
Trigger: CCCCAGGGCTTCTCCAGGGCAGCACAGGGACCCCGG...CATTTCACCCCACGCTCTGCTGGCTGGCAGAGGAGAAGGCAGTCGTTTCCTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
3UTR-3UTR GCA 90 bp GGAACGCACAGCCAGACACACACACACACACCCTGCCACGCACAGCACGCAGGCGACTGCCTTCTCCTCTaGCAGCCAGCAGAGCGTGGG +
Preference number: 2 (lower is better)
Translates to: GTHSQTHTHTPCHAQHAGDCLLL*QPAERG
Trigger: CCCACGCTCTGCTGGCTGGCAGAGGAGAAGGCAGTC...GCCTGCGTGCTGTGCGTGGCAGGGTGTGTGTGTGTGTGTCTGGCTGTGCGTTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
3UTR-3UTR TCA 90 bp AGGTTCTGGATGGAGGACCGCTGCTTCTCCCCGGTGGCAGCCTCTGGGAGTCAGCGGGGCCCTTGTGGCTaGGATCCTACTGCAGGCTTA +
Preference number: 2 (lower is better)
Translates to: RFWMEDRCFSPVAASGSQRGPCG*DPTAGL
Trigger: TAAGCCTGCAGTAGGATCTCAGCCACAAGGGCCCCG...CTGACTCCCAGAGGCTGCCACCGGGGAGAAGCAGCGGTCCTCCATCCAGAACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
3UTR-3UTR GCA 90 bp GCAGCTGCTGCTGCAAGAGATGAGACACAGGAGGGGACCCTGCCAGTCCCAGATGGCCCATCGAGCACCTaGCGGCCCCTTGCTGTCTCT +
Preference number: 2 (lower is better)
Translates to: AAAAARDETQEGTLPVPDGPSST*RPLAVS
Trigger: AGAGACAGCAAGGGGCCGGCAGGTGCTCGATGGGCC...ATCTGGGACTGGCAGGGTCCCCTCCTGTGTCTCATCTCTTGCAGCAGCAGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
3UTR-3UTR GCA 90 bp AGGTTCTGGATGGAGGACCGCTGCTTCTCCCCGGTGGCAGCCTCTGGGAGTCAGGTGCCTGGTCCTCACTaGCTCCTTTTAGGGCGGGGA +
Preference number: 2 (lower is better)
Translates to: RFWMEDRCFSPVAASGSQVPGPH*LLLGRG
Trigger: TCCCCGCCCTAAAAGGAGGCAGTGAGGACCAGGCAC...CTGACTCCCAGAGGCTGCCACCGGGGAGAAGCAGCGGTCCTCCATCCAGAACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
3UTR-3UTR GCA 90 bp ATGGGACAGCCTCCCATCGGGGGCACCCCACAGGGCAGGGCTGAGACACATCCTAGTCCAGAGCTGCAGTaGCCAAAGCTACCCTGGTGG +
Preference number: 2 (lower is better)
Translates to: MGQPPIGGTPQGRAETHPSPELQ*PKLPWW
Trigger: CCACCAGGGTAGCTTTGGGCACTGCAGCTCTGGACT...AGGATGTGTCTCAGCCCTGCCCTGTGGGGTGCCCCCGATGGGAGGCTGTCCCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
3UTR-3UTR CCA 90 bp TTGCTTCAGCCCTTAGGTTCTGGATGGAGGACCGCTGCTTCTCCCCGGTGGCAGCGGGGAGCTAGGACATaGCTGAAGCCCCCGCTGCCT +
Preference number: 2 (lower is better)
Translates to: LLQPLGSGWRTAASPRWQRGART*LKPPLP
Trigger: AGGCAGCGGGGGCTTCAGCCATGTCCTAGCTCCCCG...CTGCCACCGGGGAGAAGCAGCGGTCCTCCATCCAGAACCTAAGGGCTGAAGCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
3UTR CAA 90 bp CGGGGAGCTAGGACATGGCTGAAGCCCCCGCTGCCTCCCACCGTGTaGATGGCTGGAGTTCAGCAGCTGCTGCTGCAAGAGATGAGACAC +
Preference number: 2 (lower is better)
Translates to: RGARTWLKPPLPPTV*MAGVQQLLLQEMRH
Trigger: GTGTCTCATCTCTTGCAGCAGCAGCTGCTGAACTCCAGCCATCAACACGGTGGGAGGCAGCGGGGGCTTCAGCCATGTCCTAGCTCCCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
3UTR-3UTR TCA 90 bp ATGGGACAGCCTCCCATCGGGGGCACCCCACAGGGCAGGGCTGAGACACATCCTCAGCAGAGCGTGGGGTaGAATGAGGTGAGCCAAAAG +
Preference number: 2 (lower is better)
Translates to: MGQPPIGGTPQGRAETHPQQSVG*NEVSQK
Trigger: CTTTTGGCTCACCTCATTTCACCCCACGCTCTGCTG...AGGATGTGTCTCAGCCCTGCCCTGTGGGGTGCCCCCGATGGGAGGCTGTCCCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
3UTR-3UTR GCA 90 bp TCAGCATCGTCACACACTCCGGAACGCACAGCCAGACACACACACACACACCCTCACCTGCCGGCCCCTTaGTGTCTCTCCGCCAGGGCA +
Preference number: 2 (lower is better)
Translates to: SASSHTPERTARHTHTHPHLPAP*CLSARA
Trigger: TGCCCTGGCGGAGAGACAGCAAGGGGCCGGCAGGTG...AGGGTGTGTGTGTGTGTGTCTGGCTGTGCGTTCCGGAGTGTGTGACGATGCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
3UTR-3UTR GCA 90 bp CTGGCAGCCTTTGCTTCAGCCCTTAGGTTCTGGATGGAGGACCGCTGCTTCTCCGGCCCATCGAGCACCTaGCGGCCCCTTGCTGTCTCT +
Preference number: 2 (lower is better)
Translates to: LAAFASALRFWMEDRCFSGPSST*RPLAVS
Trigger: AGAGACAGCAAGGGGCCGGCAGGTGCTCGATGGGCC...GGAGAAGCAGCGGTCCTCCATCCAGAACCTAAGGGCTGAAGCAAAGGCTGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
3UTR-3UTR CCA 90 bp AGGTTCTGGATGGAGGACCGCTGCTTCTCCCCGGTGGCAGCCTCTGGGAGTCAGAGCTGGTCCAGATGTTaGGGGGAGCAGCCATGTCCT +
Preference number: 2 (lower is better)
Translates to: RFWMEDRCFSPVAASGSQSWSRC*GEQPCP
Trigger: AGGACATGGCTGCTCCCCCCAACATCTGGACCAGCT...CTGACTCCCAGAGGCTGCCACCGGGGAGAAGCAGCGGTCCTCCATCCAGAACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
3UTR-3UTR CCA 90 bp AGAGATGAGACACAGGAGGGGACCCTGCCAGTCCCAGATCCTGATTCTGGGATGGCCCTGGAGAAGCCCTaGGGGGCCCATCGAGCACCT +
Preference number: 2 (lower is better)
Translates to: RDETQEGTLPVPDPDSGMALEKP*GAHRAP
Trigger: AGGTGCTCGATGGGCCCCCCAGGGCTTCTCCAGGGC...CATCCCAGAATCAGGATCTGGGACTGGCAGGGTCCCCTCCTGTGTCTCATCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
3UTR-3UTR CCA 90 bp ACGTCACCAAATGAGACACTGCGAATCCCACACAGGGCAAGGGGGCAGCTACAGGCCCTGGAGAAGCCCTaGGGGGCCCATCGAGCACCT +
Preference number: 2 (lower is better)
Translates to: TSPNETLRIPHRARGQLQALEKP*GAHRAP
Trigger: AGGTGCTCGATGGGCCCCCCAGGGCTTCTCCAGGGC...CTGTAGCTGCCCCCTTGCCCTGTGTGGGATTCGCAGTGTCTCATTTGGTGACGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
3UTR-3UTR CCA 90 bp GTAAGACGTCACCAAATGAGACACTGCGAATCCCACACAGGGCAAGGGGGCAGCCCCGGTGGCAGCCTCTaGGAGTCAGGGCTCCCTGGT +
Preference number: 2 (lower is better)
Translates to: VRRHQMRHCESHTGQGGSPGGSL*ESGLPG
Trigger: ACCAGGGAGCCCTGACTCCCAGAGGCTGCCACCGGG...GCTGCCCCCTTGCCCTGTGTGGGATTCGCAGTGTCTCATTTGGTGACGTCTTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
3UTR-3UTR CCA 90 bp GGAACGCACAGCCAGACACACACACACACACCCTGCCACGCACAGCACGCAGGCCCCTTAGGTTCTGGATaGAGGACCGCTGCTTCTCCC +
Preference number: 2 (lower is better)
Translates to: GTHSQTHTHTPCHAQHAGPLGSG*RTAASP
Trigger: GGGAGAAGCAGCGGTCCTCCATCCAGAACCTAAGGG...GCCTGCGTGCTGTGCGTGGCAGGGTGTGTGTGTGTGTGTCTGGCTGTGCGTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
3UTR-3UTR TCA 90 bp AGGGCAGGGCTGAGACACATCCTTCCGGCCAGTGACATGGGGCCAAACCCACACTGCTGCTGCAAGAGATaGGACACAGGAGGGGACCCT +
Preference number: 2 (lower is better)
Translates to: RAGLRHILPASDMGPNPHCCCKR*DTGGDP
Trigger: AGGGTCCCCTCCTGTGTCTCATCTCTTGCAGCAGCA...GTGTGGGTTTGGCCCCATGTCACTGGCCGGAAGGATGTGTCTCAGCCCTGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
3UTR-3UTR GCA 90 bp TCAGCATCGTCACACACTCCGGAACGCACAGCCAGACACACACACACACACCCTTGGATGGAGGACCGCTaGTTCTCCCCGGTGGCAGCC +
Preference number: 2 (lower is better)
Translates to: SASSHTPERTARHTHTHPWMEDR*FSPVAA
Trigger: GGCTGCCACCGGGGAGAAGCAGCGGTCCTCCATCCA...AGGGTGTGTGTGTGTGTGTCTGGCTGTGCGTTCCGGAGTGTGTGACGATGCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
3UTR-3UTR GCA 90 bp GGAACGCACAGCCAGACACACACACACACACCCTGCCACGCACAGCACGCAGGCCAGAGAGGAAACGACTaGCTTCTCCTCTGCCAGCCA +
Preference number: 2 (lower is better)
Translates to: GTHSQTHTHTPCHAQHAGQRGND*LLLCQP
Trigger: TGGCTGGCAGAGGAGAAGGCAGTCGTTTCCTCTCTG...GCCTGCGTGCTGTGCGTGGCAGGGTGTGTGTGTGTGTGTCTGGCTGTGCGTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
3UTR-3UTR CCA 90 bp TCAGCATCGTCACACACTCCGGAACGCACAGCCAGACACACACACACACACCCTCGGGGAGCTAGGACATaGCTGAAGCCCCCGCTGCCT +
Preference number: 2 (lower is better)
Translates to: SASSHTPERTARHTHTHPRGART*LKPPLP
Trigger: AGGCAGCGGGGGCTTCAGCCATGTCCTAGCTCCCCG...AGGGTGTGTGTGTGTGTGTCTGGCTGTGCGTTCCGGAGTGTGTGACGATGCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
3UTR-3UTR CCA 90 bp ATGGGACAGCCTCCCATCGGGGGCACCCCACAGGGCAGGGCTGAGACACATCCTCAGGCAGGTGTCATCTaGGTAGAAGTAACCTCGGAG +
Preference number: 2 (lower is better)
Translates to: MGQPPIGGTPQGRAETHPQAGVI*VEVTSE
Trigger: CTCCGAGGTTACTTCTACCCAGATGACACCTGCCTG...AGGATGTGTCTCAGCCCTGCCCTGTGGGGTGCCCCCGATGGGAGGCTGTCCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
3UTR-3UTR TCA 90 bp TTGCTTCAGCCCTTAGGTTCTGGATGGAGGACCGCTGCTTCTCCCCGGTGGCAGTGCTGCTGCAAGAGATaGGACACAGGAGGGGACCCT +
Preference number: 2 (lower is better)
Translates to: LLQPLGSGWRTAASPRWQCCCKR*DTGGDP
Trigger: AGGGTCCCCTCCTGTGTCTCATCTCTTGCAGCAGCA...CTGCCACCGGGGAGAAGCAGCGGTCCTCCATCCAGAACCTAAGGGCTGAAGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
3UTR-3UTR TCA 90 bp GAGAGGAAACGACTGCCTTCTCCTCTGCCAGCCAGCAGAGCGTGGGGTGAAATGTGCCTCCCACCGTGTTaGTGGCTGGAGTTCAGCAGC +
Preference number: 2 (lower is better)
Translates to: ERKRLPSPLPASRAWGEMCLPPC*WLEFSS
Trigger: GCTGCTGAACTCCAGCCATCAACACGGTGGGAGGCA...CATTTCACCCCACGCTCTGCTGGCTGGCAGAGGAGAAGGCAGTCGTTTCCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
3UTR-3UTR GCA 90 bp CTGGGATGGGAGATGTGGAGGAGAACTGGACAGTCTTGCTCCTCAGTACCAGGTCATCCGGGGTCCCTGTaGTGCCCTGGAGAAGCCCTG +
Preference number: 2 (lower is better)
Translates to: LGWEMWRRTGQSCSSVPGHPGSL*CPGEAL
Trigger: CAGGGCTTCTCCAGGGCAGCACAGGGACCCCGGATG...ACCTGGTACTGAGGAGCAAGACTGTCCAGTTCTCCTCCACATCTCCCATCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
3UTR-3UTR CCA 90 bp AGGGCAGGGCTGAGACACATCCTTCCGGCCAGTGACATGGGGCCAAACCCACACCACCGTGTTGATGGCTaGAGTTCAGCAGCTGCTGCT +
Preference number: 2 (lower is better)
Translates to: RAGLRHILPASDMGPNPHHRVDG*SSAAAA
Trigger: AGCAGCAGCTGCTGAACTCCAGCCATCAACACGGTG...GTGTGGGTTTGGCCCCATGTCACTGGCCGGAAGGATGTGTCTCAGCCCTGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
3UTR CAA 90 bp TGCCCAAAGCTACCCTGGTGGGAAGGGTTAGGGGCAGTAGCTGCCTaGGGGCGTGAACAGGCAGGTGTCATCTGGGTAGAAGTAACCTCG +
Preference number: 2 (lower is better)
Translates to: CPKLPWWEGLGAVAA*GREQAGVIWVEVTS
Trigger: CGAGGTTACTTCTACCCAGATGACACCTGCCTGTTCACGCCCCAAGGCAGCTACTGCCCCTAACCCTTCCCACCAGGGTAGCTTTGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
3UTR-3UTR TCA 90 bp ATGGGACAGCCTCCCATCGGGGGCACCCCACAGGGCAGGGCTGAGACACATCCTTGGGGTGAAATGAGGTaGGCCAAAAGCATCTTCAAG +
Preference number: 2 (lower is better)
Translates to: MGQPPIGGTPQGRAETHPWGEMR*AKSIFK
Trigger: CTTGAAGATGCTTTTGGCTCACCTCATTTCACCCCA...AGGATGTGTCTCAGCCCTGCCCTGTGGGGTGCCCCCGATGGGAGGCTGTCCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
3UTR-3UTR TCA 90 bp AGGGCAGGGCTGAGACACATCCTTCCGGCCAGTGACATGGGGCCAAACCCACACGAGCGTGGGGTGAAATaGGGTGAGCCAAAAGCATCT +
Preference number: 2 (lower is better)
Translates to: RAGLRHILPASDMGPNPHERGVK*GEPKAS
Trigger: AGATGCTTTTGGCTCACCTCATTTCACCCCACGCTC...GTGTGGGTTTGGCCCCATGTCACTGGCCGGAAGGATGTGTCTCAGCCCTGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
3UTR-3UTR TCA 90 bp ACGTCACCAAATGAGACACTGCGAATCCCACACAGGGCAAGGGGGCAGCTACAGCATCCTTCCGGCCAGTaGCATGGGGCCAAACCCACA +
Preference number: 2 (lower is better)
Translates to: TSPNETLRIPHRARGQLQHPSGQ*HGAKPT
Trigger: TGTGGGTTTGGCCCCATGTCACTGGCCGGAAGGATG...CTGTAGCTGCCCCCTTGCCCTGTGTGGGATTCGCAGTGTCTCATTTGGTGACGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
3UTR-3UTR GCA 90 bp CTGGCAGCCTTTGCTTCAGCCCTTAGGTTCTGGATGGAGGACCGCTGCTTCTCCGGGGCTTTTCCAGGGTaGAGGAAACTTGTGGGCAGC +
Preference number: 2 (lower is better)
Translates to: LAAFASALRFWMEDRCFSGAFPG*RKLVGS
Trigger: GCTGCCCACAAGTTTCCTGCACCCTGGAAAAGCCCC...GGAGAAGCAGCGGTCCTCCATCCAGAACCTAAGGGCTGAAGCAAAGGCTGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
3UTR-3UTR GCA 90 bp GGAACGCACAGCCAGACACACACACACACACCCTGCCACGCACAGCACGCAGGCAGAACTGGACAGTCTTaGTCCTCAGTACCAGGTCCA +
Preference number: 2 (lower is better)
Translates to: GTHSQTHTHTPCHAQHAGRTGQS*SSVPGP
Trigger: TGGACCTGGTACTGAGGAGCAAGACTGTCCAGTTCT...GCCTGCGTGCTGTGCGTGGCAGGGTGTGTGTGTGTGTGTCTGGCTGTGCGTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
3UTR-3UTR GCA 90 bp GGAACGCACAGCCAGACACACACACACACACCCTGCCACGCACAGCACGCAGGCAGAAAAGTCCAGAGCTaGAGTGCCCAAAGCTACCCT +
Preference number: 2 (lower is better)
Translates to: GTHSQTHTHTPCHAQHAGRKVQS*SAQSYP
Trigger: AGGGTAGCTTTGGGCACTGCAGCTCTGGACTTTTCT...GCCTGCGTGCTGTGCGTGGCAGGGTGTGTGTGTGTGTGTCTGGCTGTGCGTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
3UTR-3UTR GCA 90 bp ATGGGACAGCCTCCCATCGGGGGCACCCCACAGGGCAGGGCTGAGACACATCCTGCACACACACACTTGTaGATGCACACGCGTTCATAT +
Preference number: 2 (lower is better)
Translates to: MGQPPIGGTPQGRAETHPAHTHL*MHTRSY
Trigger: ATATGAACGCGTGTGCATGCACAAGTGTGTGTGTGC...AGGATGTGTCTCAGCCCTGCCCTGTGGGGTGCCCCCGATGGGAGGCTGTCCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
3UTR-3UTR CCA 90 bp GGAACGCACAGCCAGACACACACACACACACCCTGCCACGCACAGCACGCAGGCGATGTGGAGGAGAACTaGACAGTCTTGCTCCTCAGT +
Preference number: 2 (lower is better)
Translates to: GTHSQTHTHTPCHAQHAGDVEEN*TVLLLS
Trigger: ACTGAGGAGCAAGACTGTCCAGTTCTCCTCCACATC...GCCTGCGTGCTGTGCGTGGCAGGGTGTGTGTGTGTGTGTCTGGCTGTGCGTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
3UTR-3UTR CCA 90 bp AGGTTCTGGATGGAGGACCGCTGCTTCTCCCCGGTGGCAGCCTCTGGGAGTCAGGGAGGAAATAGTGCCTaGTCCTCACTGCCTCCTTTT +
Preference number: 2 (lower is better)
Translates to: RFWMEDRCFSPVAASGSQGGNSA*SSLPPF
Trigger: AAAAGGAGGCAGTGAGGACCAGGCACTATTTCCTCC...CTGACTCCCAGAGGCTGCCACCGGGGAGAAGCAGCGGTCCTCCATCCAGAACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
3UTR-3UTR CCA 90 bp AGGGCAGGGCTGAGACACATCCTTCCGGCCAGTGACATGGGGCCAAACCCACACCAGGCAGGTGTCATCTaGGTAGAAGTAACCTCGGAG +
Preference number: 2 (lower is better)
Translates to: RAGLRHILPASDMGPNPHQAGVI*VEVTSE
Trigger: CTCCGAGGTTACTTCTACCCAGATGACACCTGCCTG...GTGTGGGTTTGGCCCCATGTCACTGGCCGGAAGGATGTGTCTCAGCCCTGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
3UTR-3UTR CCA 90 bp TTGCTTCAGCCCTTAGGTTCTGGATGGAGGACCGCTGCTTCTCCCCGGTGGCAGCCAAAGCTACCCTGGTaGGAAGGGTTAGGGGCAGTA +
Preference number: 2 (lower is better)
Translates to: LLQPLGSGWRTAASPRWQPKLPW*EGLGAV
Trigger: TACTGCCCCTAACCCTTCCCACCAGGGTAGCTTTGG...CTGCCACCGGGGAGAAGCAGCGGTCCTCCATCCAGAACCTAAGGGCTGAAGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
3UTR-3UTR CCA 90 bp TTGCTTCAGCCCTTAGGTTCTGGATGGAGGACCGCTGCTTCTCCCCGGTGGCAGCACAGGCAGGAGAGCTaGCCCAAGCACACTGATAAG +
Preference number: 2 (lower is better)
Translates to: LLQPLGSGWRTAASPRWQHRQES*PKHTDK
Trigger: CTTATCAGTGTGCTTGGGCCAGCTCTCCTGCCTGTG...CTGCCACCGGGGAGAAGCAGCGGTCCTCCATCCAGAACCTAAGGGCTGAAGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
3UTR-3UTR TCA 90 bp CTGGCAGCCTTTGCTTCAGCCCTTAGGTTCTGGATGGAGGACCGCTGCTTCTCCGCCAGTCCCAGATCCTaGTTCTGGGATGGGAGATGT +
Preference number: 2 (lower is better)
Translates to: LAAFASALRFWMEDRCFSASPRS*FWDGRC
Trigger: ACATCTCCCATCCCAGAATCAGGATCTGGGACTGGC...GGAGAAGCAGCGGTCCTCCATCCAGAACCTAAGGGCTGAAGCAAAGGCTGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
3UTR-3UTR CCA 90 bp GGAACGCACAGCCAGACACACACACACACACCCTGCCACGCACAGCACGCAGGCATCCTGATTCTGGGATaGGAGATGTGGAGGAGAACT +
Preference number: 2 (lower is better)
Translates to: GTHSQTHTHTPCHAQHAGILILG*EMWRRT
Trigger: AGTTCTCCTCCACATCTCCCATCCCAGAATCAGGAT...GCCTGCGTGCTGTGCGTGGCAGGGTGTGTGTGTGTGTGTCTGGCTGTGCGTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
3UTR-3UTR CCA 90 bp TCAGCATCGTCACACACTCCGGAACGCACAGCCAGACACACACACACACACCCTTGCCCAAAGCTACCCTaGTGGGAAGGGTTAGGGGCA +
Preference number: 2 (lower is better)
Translates to: SASSHTPERTARHTHTHPCPKLP*WEGLGA
Trigger: TGCCCCTAACCCTTCCCACCAGGGTAGCTTTGGGCA...AGGGTGTGTGTGTGTGTGTCTGGCTGTGCGTTCCGGAGTGTGTGACGATGCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
3UTR-3UTR CCA 90 bp CTGGGATGGGAGATGTGGAGGAGAACTGGACAGTCTTGCTCCTCAGTACCAGGTAGCTGGTCCAGATGTTaGGGGGAGCAGCCATGTCCT +
Preference number: 2 (lower is better)
Translates to: LGWEMWRRTGQSCSSVPGSWSRC*GEQPCP
Trigger: AGGACATGGCTGCTCCCCCCAACATCTGGACCAGCT...ACCTGGTACTGAGGAGCAAGACTGTCCAGTTCTCCTCCACATCTCCCATCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
3UTR-3UTR CCA 90 bp GTAAGACGTCACCAAATGAGACACTGCGAATCCCACACAGGGCAAGGGGGCAGCTGGCCAGGGACAGTGTaGGGAAAAAGAGATGGGGAC +
Preference number: 2 (lower is better)
Translates to: VRRHQMRHCESHTGQGGSWPGTV*GKRDGD
Trigger: GTCCCCATCTCTTTTTCCCCACACTGTCCCTGGCCA...GCTGCCCCCTTGCCCTGTGTGGGATTCGCAGTGTCTCATTTGGTGACGTCTTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
3UTR-3UTR GCA 90 bp GTCATCTGGGTAGAAGTAACCTCGGAGGAAATAGTGCCTGGTCCTCACTGCCTCGGGGCTTTTCCAGGGTaGAGGAAACTTGTGGGCAGC +
Preference number: 2 (lower is better)
Translates to: VIWVEVTSEEIVPGPHCLGAFPG*RKLVGS
Trigger: GCTGCCCACAAGTTTCCTGCACCCTGGAAAAGCCCC...GAGGCAGTGAGGACCAGGCACTATTTCCTCCGAGGTTACTTCTACCCAGATGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
3UTR-3UTR GCA 90 bp GGAACGCACAGCCAGACACACACACACACACCCTGCCACGCACAGCACGCAGGCACTCTGATTTATATGTaGACCCTAACCAGAGGGCAA +
Preference number: 2 (lower is better)
Translates to: GTHSQTHTHTPCHAQHAGTLIYM*TLTRGQ
Trigger: TTGCCCTCTGGTTAGGGTGCACATATAAATCAGAGT...GCCTGCGTGCTGTGCGTGGCAGGGTGTGTGTGTGTGTGTCTGGCTGTGCGTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
3UTR-3UTR CCA 90 bp GACAGTCTTGCTCCTCAGTACCAGGTCCACATCAGAGGCTGTGGAAGACAGCTGGGTGCAGGAAACTTGTaGGCAGCTGAATGCCTGAGG +
Preference number: 2 (lower is better)
Translates to: DSLAPQYQVHIRGCGRQLGAGNL*AAECLR
Trigger: CCTCAGGCATTCAGCTGCCCACAAGTTTCCTGCACC...CAGCTGTCTTCCACAGCCTCTGATGTGGACCTGGTACTGAGGAGCAAGACTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
3UTR-3UTR CCA 90 bp GAGAGGAAACGACTGCCTTCTCCTCTGCCAGCCAGCAGAGCGTGGGGTGAAATGGATGTGGAGGAGAACTaGACAGTCTTGCTCCTCAGT +
Preference number: 2 (lower is better)
Translates to: ERKRLPSPLPASRAWGEMDVEEN*TVLLLS
Trigger: ACTGAGGAGCAAGACTGTCCAGTTCTCCTCCACATC...CATTTCACCCCACGCTCTGCTGGCTGGCAGAGGAGAAGGCAGTCGTTTCCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
3UTR CAA 90 bp GATCCTGATTCTGGGATGGGAGATGTGGAGGAGAACTGGACAGTCTaGCTCCTCAGTACCAGGTCCACATCAGAGGCTGTGGAAGACAGC +
Preference number: 2 (lower is better)
Translates to: DPDSGMGDVEENWTV*LLSTRSTSEAVEDS
Trigger: GCTGTCTTCCACAGCCTCTGATGTGGACCTGGTACTGAGGAGCAAGACTGTCCAGTTCTCCTCCACATCTCCCATCCCAGAATCAGGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
3UTR-3UTR GCA 90 bp CTGGCAGCCTTTGCTTCAGCCCTTAGGTTCTGGATGGAGGACCGCTGCTTCTCCTGGCTGAGATCCTACTaGAGGCTTAGCCTATTTCTG +
Preference number: 2 (lower is better)
Translates to: LAAFASALRFWMEDRCFSWLRSY*RLSLFL
Trigger: CAGAAATAGGCTAAGCCTGCAGTAGGATCTCAGCCA...GGAGAAGCAGCGGTCCTCCATCCAGAACCTAAGGGCTGAAGCAAAGGCTGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
3UTR-3UTR CCA 90 bp GTAAGACGTCACCAAATGAGACACTGCGAATCCCACACAGGGCAAGGGGGCAGCGGAGGAAATAGTGCCTaGTCCTCACTGCCTCCTTTT +
Preference number: 2 (lower is better)
Translates to: VRRHQMRHCESHTGQGGSGGNSA*SSLPPF
Trigger: AAAAGGAGGCAGTGAGGACCAGGCACTATTTCCTCC...GCTGCCCCCTTGCCCTGTGTGGGATTCGCAGTGTCTCATTTGGTGACGTCTTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
3UTR-3UTR CCA 90 bp TCAGCATCGTCACACACTCCGGAACGCACAGCCAGACACACACACACACACCCTATCCTGATTCTGGGATaGGAGATGTGGAGGAGAACT +
Preference number: 2 (lower is better)
Translates to: SASSHTPERTARHTHTHPILILG*EMWRRT
Trigger: AGTTCTCCTCCACATCTCCCATCCCAGAATCAGGAT...AGGGTGTGTGTGTGTGTGTCTGGCTGTGCGTTCCGGAGTGTGTGACGATGCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
3UTR-3UTR CCA 90 bp CCTGATTCTGGGATGGGAGATGTGGAGGAGAACTGGACAGTCTTGCTCCTCAGTCCACATCAGAGGCTGTaGAAGACAGCTGTCAGTTTC +
Preference number: 2 (lower is better)
Translates to: PDSGMGDVEENWTVLLLSPHQRL*KTAVSF
Trigger: GAAACTGACAGCTGTCTTCCACAGCCTCTGATGTGG...ACTGAGGAGCAAGACTGTCCAGTTCTCCTCCACATCTCCCATCCCAGAATCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
3UTR CAA 90 bp ACACACACACACCCTGCCACGCACAGCACGCAGGCACACACACACTaGTGCATGCACACGCGTTCATATATTAACTCTGATTTATATGTG +
Preference number: 2 (lower is better)
Translates to: THTHPATHSTQAHTH*CMHTRSYINSDLYV
Trigger: CACATATAAATCAGAGTTAATATATGAACGCGTGTGCATGCACAAGTGTGTGTGTGCCTGCGTGCTGTGCGTGGCAGGGTGTGTGTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
3UTR-3UTR CAA 90 bp ATGGGACAGCCTCCCATCGGGGGCACCCCACAGGGCAGGGCTGAGACACATCCTGGGGCAGTAGCTGCCTaGGGGCGTGAACAGGCAGGT +
Preference number: 3 (lower is better)
Translates to: MGQPPIGGTPQGRAETHPGAVAA*GREQAG
Trigger: ACCTGCCTGTTCACGCCCCAAGGCAGCTACTGCCCC...AGGATGTGTCTCAGCCCTGCCCTGTGGGGTGCCCCCGATGGGAGGCTGTCCCAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
3UTR CCA 72 bp TTGCTGTCTCTCCGCCAGGGCAGCTGGTCCAGATGTTaGGGGGAGCAGCCATGTCCTGGGGGCCAGGCTCCA +
Preference number: 3 (lower is better)
Translates to: LLSLRQGSWSRC*GEQPCPGGQAP
Trigger: TGGAGCCTGGCCCCCAGGACATGGCTGCTCCCCCCAACATCTGGACCAGCTGCCCTGGCGGAGAGACAGCAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
3UTR TCA 72 bp CCACAGGGCAGGGCTGAGACACATCCTTCCGGCCAGTaGCATGGGGCCAAACCCACACCCTTCTCATCCCTC +
Preference number: 3 (lower is better)
Translates to: PQGRAETHPSGQ*HGAKPTPFSSL
Trigger: GAGGGATGAGAAGGGTGTGGGTTTGGCCCCATGTCACTGGCCGGAAGGATGTGTCTCAGCCCTGCCCTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
3UTR GCA 72 bp TTTGCTTCAGCCCTTAGGTTCTGGATGGAGGACCGCTaGTTCTCCCCGGTGGCAGCCTCTGGGAGTCAGGGC +
Preference number: 3 (lower is better)
Translates to: FASALRFWMEDR*FSPVAASGSQG
Trigger: GCCCTGACTCCCAGAGGCTGCCACCGGGGAGAAGCAGCGGTCCTCCATCCAGAACCTAAGGGCTGAAGCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
3UTR CCA 72 bp TCCTGGCAGCCTTTGCTTCAGCCCTTAGGTTCTGGATaGAGGACCGCTGCTTCTCCCCGGTGGCAGCCTCTG +
Preference number: 3 (lower is better)
Translates to: SWQPLLQPLGSG*RTAASPRWQPL
Trigger: CAGAGGCTGCCACCGGGGAGAAGCAGCGGTCCTCCATCCAGAACCTAAGGGCTGAAGCAAAGGCTGCCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
3UTR-3UTR CAA 90 bp AGGGCAGGGCTGAGACACATCCTTCCGGCCAGTGACATGGGGCCAAACCCACACGGGTCCTGGCAGCCTTaGCTTCAGCCCTTAGGTTCT +
Preference number: 3 (lower is better)
Translates to: RAGLRHILPASDMGPNPHGSWQP*LQPLGS
Trigger: AGAACCTAAGGGCTGAAGCAAAGGCTGCCAGGACCC...GTGTGGGTTTGGCCCCATGTCACTGGCCGGAAGGATGTGTCTCAGCCCTGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
3UTR CCA 72 bp GCTGAAGCCCCCGCTGCCTCCCACCGTGTTGATGGCTaGAGTTCAGCAGCTGCTGCTGCAAGAGATGAGACA +
Preference number: 3 (lower is better)
Translates to: AEAPAASHRVDG*SSAAAAARDET
Trigger: TGTCTCATCTCTTGCAGCAGCAGCTGCTGAACTCCAGCCATCAACACGGTGGGAGGCAGCGGGGGCTTCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
3UTR-3UTR CAA 90 bp ACGTCACCAAATGAGACACTGCGAATCCCACACAGGGCAAGGGGGCAGCTACAGCATCCTGCGGGGCCCTaGTGGCTGAGATCCTACTGC +
Preference number: 3 (lower is better)
Translates to: TSPNETLRIPHRARGQLQHPAGP*WLRSYC
Trigger: GCAGTAGGATCTCAGCCACAAGGGCCCCGCAGGATG...CTGTAGCTGCCCCCTTGCCCTGTGTGGGATTCGCAGTGTCTCATTTGGTGACGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
3UTR-3UTR CAA 90 bp GTAAGACGTCACCAAATGAGACACTGCGAATCCCACACAGGGCAAGGGGGCAGCCTGCCTCCCACCGTGTaGATGGCTGGAGTTCAGCAG +
Preference number: 3 (lower is better)
Translates to: VRRHQMRHCESHTGQGGSLPPTV*MAGVQQ
Trigger: CTGCTGAACTCCAGCCATCAACACGGTGGGAGGCAG...GCTGCCCCCTTGCCCTGTGTGGGATTCGCAGTGTCTCATTTGGTGACGTCTTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
3UTR TCA 72 bp CCTCTGCCAGCCAGCAGAGCGTGGGGTGAAATGAGGTaGGCCAAAAGCATCTTCAAGGGTCCTGGCAGCCTT +
Preference number: 3 (lower is better)
Translates to: PLPASRAWGEMR*AKSIFKGPGSL
Trigger: AAGGCTGCCAGGACCCTTGAAGATGCTTTTGGCTCACCTCATTTCACCCCACGCTCTGCTGGCTGGCAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
3UTR CCA 72 bp AGGGGACCCTGCCAGTCCCAGATCCTGATTCTGGGATaGGAGATGTGGAGGAGAACTGGACAGTCTTGCTCC +
Preference number: 3 (lower is better)
Translates to: RGPCQSQILILG*EMWRRTGQSCS
Trigger: GGAGCAAGACTGTCCAGTTCTCCTCCACATCTCCCATCCCAGAATCAGGATCTGGGACTGGCAGGGTCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
3UTR-3UTR CAA 90 bp GACAGTCTTGCTCCTCAGTACCAGGTCCACATCAGAGGCTGTGGAAGACAGCTGCAGGGTGCAGGAAACTaGTGGGCAGCTGAATGCCTG +
Preference number: 3 (lower is better)
Translates to: DSLAPQYQVHIRGCGRQLQGAGN*WAAECL
Trigger: CAGGCATTCAGCTGCCCACAAGTTTCCTGCACCCTG...CAGCTGTCTTCCACAGCCTCTGATGTGGACCTGGTACTGAGGAGCAAGACTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
3UTR-3UTR CAA 90 bp TCAGCATCGTCACACACTCCGGAACGCACAGCCAGACACACACACACACACCCTGAGAACTGGACAGTCTaGCTCCTCAGTACCAGGTCC +
Preference number: 3 (lower is better)
Translates to: SASSHTPERTARHTHTHPENWTV*LLSTRS
Trigger: GGACCTGGTACTGAGGAGCAAGACTGTCCAGTTCTC...AGGGTGTGTGTGTGTGTGTCTGGCTGTGCGTTCCGGAGTGTGTGACGATGCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
3UTR TCA 72 bp CTTCTCCTCTGCCAGCCAGCAGAGCGTGGGGTGAAATaGGGTGAGCCAAAAGCATCTTCAAGGGTCCTGGCA +
Preference number: 3 (lower is better)
Translates to: LLLCQPAERGVK*GEPKASSRVLA
Trigger: TGCCAGGACCCTTGAAGATGCTTTTGGCTCACCTCATTTCACCCCACGCTCTGCTGGCTGGCAGAGGAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
3UTR TCA 72 bp AACCCACACCCTTCTCATCCCTCGTCCCCATCCAGGTaGGTAATGAAGCAGCAAGCCCAAGGCCACACAGCT +
Preference number: 3 (lower is better)
Translates to: NPHPSHPSSPSR*VMKQQAQGHTA
Trigger: AGCTGTGTGGCCTTGGGCTTGCTGCTTCATTACTCACCTGGATGGGGACGAGGGATGAGAAGGGTGTGGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
3UTR-3UTR CAA 90 bp CCTGATTCTGGGATGGGAGATGTGGAGGAGAACTGGACAGTCTTGCTCCTCAGTCAGGGTGCAGGAAACTaGTGGGCAGCTGAATGCCTG +
Preference number: 3 (lower is better)
Translates to: PDSGMGDVEENWTVLLLSQGAGN*WAAECL
Trigger: CAGGCATTCAGCTGCCCACAAGTTTCCTGCACCCTG...ACTGAGGAGCAAGACTGTCCAGTTCTCCTCCACATCTCCCATCCCAGAATCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
3UTR CCA 72 bp GATCCTGATTCTGGGATGGGAGATGTGGAGGAGAACTaGACAGTCTTGCTCCTCAGTACCAGGTCCACATCA +
Preference number: 3 (lower is better)
Translates to: DPDSGMGDVEEN*TVLLLSTRSTS
Trigger: TGATGTGGACCTGGTACTGAGGAGCAAGACTGTCCAGTTCTCCTCCACATCTCCCATCCCAGAATCAGGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
3UTR TCA 72 bp TATTTATTCCACAAGGTGGGAGATGGGGTGAGGAGATaGTCACCAGTAAGACGTCACCAAATGAGACACTGC +
Preference number: 3 (lower is better)
Translates to: YLFHKVGDGVRR*SPVRRHQMRHC
Trigger: GCAGTGTCTCATTTGGTGACGTCTTACTGGTGATCATCTCCTCACCCCATCTCCCACCTTGTGGAATAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR GCA 90 bp ATGGGACAGCCTCCCATCGGGGGCACCCCACAGGGCAGGGCTGAGACACATCCTGTCCCACCTCAAGGATaGTCGGGCGGCGGAGACGGC +
Preference number: 4 (lower is better)
Translates to: MGQPPIGGTPQGRAETHPVPPQG*SGGGDG
Trigger: GCCGTCTCCGCCGCCCGAGCATCCTTGAGGTGGGAC...AGGATGTGTCTCAGCCCTGCCCTGTGGGGTGCCCCCGATGGGAGGCTGTCCCAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333538.10
CDS-3UTR GCA 90 bp GGAACGCACAGCCAGACACACACACACACACCCTGCCACGCACAGCACGCAGGCCACCTGCCGGCCCCTTaGTGTCTCTCCGCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: GTHSQTHTHTPCHAQHAGHLPAP*CLSARA
Trigger: TGCCCTGGCGGAGAGACAGCAAGGGGCCGGCAGGTG...GCCTGCGTGCTGTGCGTGGCAGGGTGTGTGTGTGTGTGTCTGGCTGTGCGTTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR GCA 90 bp ATGGGACAGCCTCCCATCGGGGGCACCCCACAGGGCAGGGCTGAGACACATCCTGGCCCATCGAGCACCTaGCGGCCCCTTGCTGTCTCT +
Preference number: 4 (lower is better)
Translates to: MGQPPIGGTPQGRAETHPGPSST*RPLAVS
Trigger: AGAGACAGCAAGGGGCCGGCAGGTGCTCGATGGGCC...AGGATGTGTCTCAGCCCTGCCCTGTGGGGTGCCCCCGATGGGAGGCTGTCCCAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR GCA 90 bp AGGGCAGGGCTGAGACACATCCTTCCGGCCAGTGACATGGGGCCAAACCCACACCCGGGGTCCCTGTGCTaGCCTGGAGAAGCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: RAGLRHILPASDMGPNPHPGSLC*PGEALG
Trigger: CCCCAGGGCTTCTCCAGGGCAGCACAGGGACCCCGG...GTGTGGGTTTGGCCCCATGTCACTGGCCGGAAGGATGTGTCTCAGCCCTGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CCA 90 bp ATGGGACAGCCTCCCATCGGGGGCACCCCACAGGGCAGGGCTGAGACACATCCTCGGGGAGCTAGGACATaGCTGAAGCCCCCGCTGCCT +
Preference number: 4 (lower is better)
Translates to: MGQPPIGGTPQGRAETHPRGART*LKPPLP
Trigger: AGGCAGCGGGGGCTTCAGCCATGTCCTAGCTCCCCG...AGGATGTGTCTCAGCCCTGCCCTGTGGGGTGCCCCCGATGGGAGGCTGTCCCAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CCA 90 bp AGGTTCTGGATGGAGGACCGCTGCTTCTCCCCGGTGGCAGCCTCTGGGAGTCAGCCCGGTGGCAGCCTCTaGGAGTCAGGGCTCCCTGGT +
Preference number: 4 (lower is better)
Translates to: RFWMEDRCFSPVAASGSQPGGSL*ESGLPG
Trigger: ACCAGGGAGCCCTGACTCCCAGAGGCTGCCACCGGG...CTGACTCCCAGAGGCTGCCACCGGGGAGAAGCAGCGGTCCTCCATCCAGAACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR GCA 90 bp TTGCTTCAGCCCTTAGGTTCTGGATGGAGGACCGCTGCTTCTCCCCGGTGGCAGGGAGCGGCGCACAGGTaGCGGACTCAGGGATCGCCG +
Preference number: 4 (lower is better)
Translates to: LLQPLGSGWRTAASPRWQGAAHR*RTQGSP
Trigger: CGGCGATCCCTGAGTCCGGCACCTGTGCGCCGCTCC...CTGCCACCGGGGAGAAGCAGCGGTCCTCCATCCAGAACCTAAGGGCTGAAGCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333538.10
CDS-3UTR CCA 90 bp CTGGCAGCCTTTGCTTCAGCCCTTAGGTTCTGGATGGAGGACCGCTGCTTCTCCCACAGCCTCCCACCTTaGCCCGCAGGCGGCCGTCGC +
Preference number: 4 (lower is better)
Translates to: LAAFASALRFWMEDRCFSHSLPP*PAGGRR
Trigger: GCGACGGCCGCCTGCGGGCCAAGGTGGGAGGCTGTG...GGAGAAGCAGCGGTCCTCCATCCAGAACCTAAGGGCTGAAGCAAAGGCTGCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333538.10
CDS-3UTR CCA 90 bp GCAGCTGCTGCTGCAAGAGATGAGACACAGGAGGGGACCCTGCCAGTCCCAGATGGACCGCATCCTGGATaGGGCTGGCGCTGTGCGCGC +
Preference number: 4 (lower is better)
Translates to: AAAAARDETQEGTLPVPDGPHPG*GWRCAR
Trigger: GCGCGCACAGCGCCAGCCCCATCCAGGATGCGGTCC...ATCTGGGACTGGCAGGGTCCCCTCCTGTGTCTCATCTCTTGCAGCAGCAGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333538.10
CDS-3UTR CCA 90 bp ATGGGACAGCCTCCCATCGGGGGCACCCCACAGGGCAGGGCTGAGACACATCCTTTCAGGACCGCATCCTaGATGGGGCTGGCGCTGTGC +
Preference number: 4 (lower is better)
Translates to: MGQPPIGGTPQGRAETHPFRTAS*MGLALC
Trigger: GCACAGCGCCAGCCCCATCCAGGATGCGGTCCTGAA...AGGATGTGTCTCAGCCCTGCCCTGTGGGGTGCCCCCGATGGGAGGCTGTCCCAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333538.10
CDS-3UTR CCA 90 bp AGGTTCTGGATGGAGGACCGCTGCTTCTCCCCGGTGGCAGCCTCTGGGAGTCAGGCTGCTTCTCCCCGGTaGCAGCCTCTGGGAGTCAGG +
Preference number: 4 (lower is better)
Translates to: RFWMEDRCFSPVAASGSQAASPR*QPLGVR
Trigger: CCTGACTCCCAGAGGCTGCCACCGGGGAGAAGCAGC...CTGACTCCCAGAGGCTGCCACCGGGGAGAAGCAGCGGTCCTCCATCCAGAACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR TCA 90 bp GTAAGACGTCACCAAATGAGACACTGCGAATCCCACACAGGGCAAGGGGGCAGCTGGCGCTGTGCGCGCTaGGGTTGGCCACCTCGGCGC +
Preference number: 4 (lower is better)
Translates to: VRRHQMRHCESHTGQGGSWRCAR*GWPPRR
Trigger: GCGCCGAGGTGGCCAACCTCAGCGCGCACAGCGCCA...GCTGCCCCCTTGCCCTGTGTGGGATTCGCAGTGTCTCATTTGGTGACGTCTTAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333538.10
CDS-3UTR TCA 90 bp ATGGGACAGCCTCCCATCGGGGGCACCCCACAGGGCAGGGCTGAGACACATCCTAGCTGCCTTGGGGCGTaGACAGGCAGGTGTCATCTG +
Preference number: 4 (lower is better)
Translates to: MGQPPIGGTPQGRAETHPSCLGA*TGRCHL
Trigger: CAGATGACACCTGCCTGTTCACGCCCCAAGGCAGCT...AGGATGTGTCTCAGCCCTGCCCTGTGGGGTGCCCCCGATGGGAGGCTGTCCCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR GCA 90 bp AGGGCAGGGCTGAGACACATCCTTCCGGCCAGTGACATGGGGCCAAACCCACACTGGATGGAGGACCGCTaGTTCTCCCCGGTGGCAGCC +
Preference number: 4 (lower is better)
Translates to: RAGLRHILPASDMGPNPHWMEDR*FSPVAA
Trigger: GGCTGCCACCGGGGAGAAGCAGCGGTCCTCCATCCA...GTGTGGGTTTGGCCCCATGTCACTGGCCGGAAGGATGTGTCTCAGCCCTGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CCA 90 bp AGGTTCTGGATGGAGGACCGCTGCTTCTCCCCGGTGGCAGCCTCTGGGAGTCAGTCGCAGTCCAGGAGCTaGGGCAGCCGACTCTTGGAG +
Preference number: 4 (lower is better)
Translates to: RFWMEDRCFSPVAASGSQSQSRS*GSRLLE
Trigger: CTCCAAGAGTCGGCTGCCCCAGCTCCTGGACTGCGA...CTGACTCCCAGAGGCTGCCACCGGGGAGAAGCAGCGGTCCTCCATCCAGAACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CCA 90 bp TTGCTTCAGCCCTTAGGTTCTGGATGGAGGACCGCTGCTTCTCCCCGGTGGCAGGCCCTGGAGAAGCCCTaGGGGGCCCATCGAGCACCT +
Preference number: 4 (lower is better)
Translates to: LLQPLGSGWRTAASPRWQALEKP*GAHRAP
Trigger: AGGTGCTCGATGGGCCCCCCAGGGCTTCTCCAGGGC...CTGCCACCGGGGAGAAGCAGCGGTCCTCCATCCAGAACCTAAGGGCTGAAGCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR TCA 90 bp ATGGGACAGCCTCCCATCGGGGGCACCCCACAGGGCAGGGCTGAGACACATCCTAATGTGGGCCACCCGTaGGCAAGGAAGGACCTCCAT +
Preference number: 4 (lower is better)
Translates to: MGQPPIGGTPQGRAETHPNVGHP*ARKDLH
Trigger: ATGGAGGTCCTTCCTTGCTCACGGGTGGCCCACATT...AGGATGTGTCTCAGCCCTGCCCTGTGGGGTGCCCCCGATGGGAGGCTGTCCCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR TCA 90 bp GCAGCTGCTGCTGCAAGAGATGAGACACAGGAGGGGACCCTGCCAGTCCCAGATTGCAGCTGCGGAGGATaGGGTCGATGCCAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: AAAAARDETQEGTLPVPDCSCGG*GRCQPG
Trigger: GCCTGGCTGGCATCGACCTCATCCTCCGCAGCTGCA...ATCTGGGACTGGCAGGGTCCCCTCCTGTGTCTCATCTCTTGCAGCAGCAGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR TCA 90 bp GGAACGCACAGCCAGACACACACACACACACCCTGCCACGCACAGCACGCAGGCCGGGGCCCTTGTGGCTaGGATCCTACTGCAGGCTTA +
Preference number: 4 (lower is better)
Translates to: GTHSQTHTHTPCHAQHAGRGPCG*DPTAGL
Trigger: TAAGCCTGCAGTAGGATCTCAGCCACAAGGGCCCCG...GCCTGCGTGCTGTGCGTGGCAGGGTGTGTGTGTGTGTGTCTGGCTGTGCGTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR GCA 90 bp TCAGCATCGTCACACACTCCGGAACGCACAGCCAGACACACACACACACACCCTGCTCCCCGAGACGCCTaGTCAGTCCACGGCGCACGG +
Preference number: 4 (lower is better)
Translates to: SASSHTPERTARHTHTHPAPRDA*SVHGAR
Trigger: CCGTGCGCCGTGGACTGAGCAGGCGTCTCGGGGAGC...AGGGTGTGTGTGTGTGTGTCTGGCTGTGCGTTCCGGAGTGTGTGACGATGCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333538.10
CDS-3UTR GCA 90 bp CTGGGATGGGAGATGTGGAGGAGAACTGGACAGTCTTGCTCCTCAGTACCAGGTGGAAGGCGTCTCCGCTaGGCACCGCGATGGGCCGGC +
Preference number: 4 (lower is better)
Translates to: LGWEMWRRTGQSCSSVPGGRRLR*APRWAG
Trigger: GCCGGCCCATCGCGGTGCGCAGCGGAGACGCCTTCC...ACCTGGTACTGAGGAGCAAGACTGTCCAGTTCTCCTCCACATCTCCCATCCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333538.10
CDS-3UTR GCA 90 bp GGAACGCACAGCCAGACACACACACACACACCCTGCCACGCACAGCACGCAGGCCCTTCCAGCCCTCAATaGGAGCGCGGATCAGGCCTT +
Preference number: 4 (lower is better)
Translates to: GTHSQTHTHTPCHAQHAGPSSPQ*ERGSGL
Trigger: AAGGCCTGATCCGCGCTCGCATTGAGGGCTGGAAGG...GCCTGCGTGCTGTGCGTGGCAGGGTGTGTGTGTGTGTGTCTGGCTGTGCGTTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CCA 90 bp AGGGCAGGGCTGAGACACATCCTTCCGGCCAGTGACATGGGGCCAAACCCACACCGATGGGCCGGCACTTaGCCAGGAAGAGCACGAAGC +
Preference number: 4 (lower is better)
Translates to: RAGLRHILPASDMGPNPHRWAGT*PGRARS
Trigger: GCTTCGTGCTCTTCCTGGCCAAGTGCCGGCCCATCG...GTGTGGGTTTGGCCCCATGTCACTGGCCGGAAGGATGTGTCTCAGCCCTGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333538.10
CDS-3UTR CCA 90 bp ATGGGACAGCCTCCCATCGGGGGCACCCCACAGGGCAGGGCTGAGACACATCCTCGCTTCCGGTTTTCCTaGATGCGGGATAGAACCGGC +
Preference number: 4 (lower is better)
Translates to: MGQPPIGGTPQGRAETHPRFRFS*MRDRTG
Trigger: GCCGGTTCTATCCCGCATCCAGGAAAACCGGAAGCG...AGGATGTGTCTCAGCCCTGCCCTGTGGGGTGCCCCCGATGGGAGGCTGTCCCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CCA 90 bp AGGGCAGGGCTGAGACACATCCTTCCGGCCAGTGACATGGGGCCAAACCCACACGGGGCAGCCGACTCTTaGAGTTGTCCACCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: RAGLRHILPASDMGPNPHGAADS*SCPPGS
Trigger: GCTGCCTGGTGGACAACTCCAAGAGTCGGCTGCCCC...GTGTGGGTTTGGCCCCATGTCACTGGCCGGAAGGATGTGTCTCAGCCCTGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR TCA 90 bp AGGGCAGGGCTGAGACACATCCTTCCGGCCAGTGACATGGGGCCAAACCCACACTCATGGCTGGGGTCCTaGTGGGGAGAGAAGGGTCTC +
Preference number: 4 (lower is better)
Translates to: RAGLRHILPASDMGPNPHSWLGS*WGEKGL
Trigger: GAGACCCTTCTCTCCCCATCAGGACCCCAGCCATGA...GTGTGGGTTTGGCCCCATGTCACTGGCCGGAAGGATGTGTCTCAGCCCTGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR TCA 90 bp ATGGGACAGCCTCCCATCGGGGGCACCCCACAGGGCAGGGCTGAGACACATCCTTGTACAGGCTGCTCTTaGCCTTGTCGCAGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: MGQPPIGGTPQGRAETHPCTGCS*PCRSPG
Trigger: TCCTGGACTGCGACAAGGTCAAGAGCAGCCTGTACA...AGGATGTGTCTCAGCCCTGCCCTGTGGGGTGCCCCCGATGGGAGGCTGTCCCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR TCA 90 bp AGGGCAGGGCTGAGACACATCCTTCCGGCCAGTGACATGGGGCCAAACCCACACTGCCTCCCACCGTGTTaGTGGCTGGAGTTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: RAGLRHILPASDMGPNPHCLPPC*WLEFSS
Trigger: GCTGCTGAACTCCAGCCATCAACACGGTGGGAGGCA...GTGTGGGTTTGGCCCCATGTCACTGGCCGGAAGGATGTGTCTCAGCCCTGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR GCA 90 bp AGGTTCTGGATGGAGGACCGCTGCTTCTCCCCGGTGGCAGCCTCTGGGAGTCAGTGGAAGTCCTCGCTCTaGAGAAGTGCTCCCCGAGAC +
Preference number: 4 (lower is better)
Translates to: RFWMEDRCFSPVAASGSQWKSSL*RSAPRD
Trigger: GTCTCGGGGAGCACTTCTGCAGAGCGAGGACTTCCA...CTGACTCCCAGAGGCTGCCACCGGGGAGAAGCAGCGGTCCTCCATCCAGAACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333538.10
CDS-3UTR GCA 90 bp AGGGCAGGGCTGAGACACATCCTTCCGGCCAGTGACATGGGGCCAAACCCACACCCTTCCAGCCCTCAATaGGAGCGCGGATCAGGCCTT +
Preference number: 4 (lower is better)
Translates to: RAGLRHILPASDMGPNPHPSSPQ*ERGSGL
Trigger: AAGGCCTGATCCGCGCTCGCATTGAGGGCTGGAAGG...GTGTGGGTTTGGCCCCATGTCACTGGCCGGAAGGATGTGTCTCAGCCCTGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR GCA 90 bp GACAGTCTTGCTCCTCAGTACCAGGTCCACATCAGAGGCTGTGGAAGACAGCTGCCGGGGTCCCTGTGCTaGCCTGGAGAAGCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: DSLAPQYQVHIRGCGRQLPGSLC*PGEALG
Trigger: CCCCAGGGCTTCTCCAGGGCAGCACAGGGACCCCGG...CAGCTGTCTTCCACAGCCTCTGATGTGGACCTGGTACTGAGGAGCAAGACTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CCA 90 bp TCAGCATCGTCACACACTCCGGAACGCACAGCCAGACACACACACACACACCCTGGCGGCGGAGACGGCTaGGAGGTCGGATTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: SASSHTPERTARHTHTHPGGGDG*EVGLVV
Trigger: CACCACCAATCCGACCTCCCAGCCGTCTCCGCCGCC...AGGGTGTGTGTGTGTGTGTCTGGCTGTGCGTTCCGGAGTGTGTGACGATGCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333538.10
CDS-3UTR CCA 90 bp GAGGAGAACTGGACAGTCTTGCTCCTCAGTACCAGGTCCACATCAGAGGCTGTGCGCTGCGCACCGCGATaGGCCGGCACTTGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: EENWTVLLLSTRSTSEAVRCAPR*AGTWPG
Trigger: TCCTGGCCAAGTGCCGGCCCATCGCGGTGCGCAGCG...CACAGCCTCTGATGTGGACCTGGTACTGAGGAGCAAGACTGTCCAGTTCTCCTC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333538.10
CDS-3UTR CCA 90 bp AGGTTCTGGATGGAGGACCGCTGCTTCTCCCCGGTGGCAGCCTCTGGGAGTCAGCGCTTCCGGTTTTCCTaGATGCGGGATAGAACCGGC +
Preference number: 4 (lower is better)
Translates to: RFWMEDRCFSPVAASGSQRFRFS*MRDRTG
Trigger: GCCGGTTCTATCCCGCATCCAGGAAAACCGGAAGCG...CTGACTCCCAGAGGCTGCCACCGGGGAGAAGCAGCGGTCCTCCATCCAGAACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CCA 90 bp ATGGGACAGCCTCCCATCGGGGGCACCCCACAGGGCAGGGCTGAGACACATCCTTTCTCCAGCGGCCCCTaGTCCAAGCAGACGTCTTTT +
Preference number: 4 (lower is better)
Translates to: MGQPPIGGTPQGRAETHPFSSGP*SKQTSF
Trigger: AAAAGACGTCTGCTTGGACCAGGGGCCGCTGGAGAA...AGGATGTGTCTCAGCCCTGCCCTGTGGGGTGCCCCCGATGGGAGGCTGTCCCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CCA 90 bp GGAACGCACAGCCAGACACACACACACACACCCTGCCACGCACAGCACGCAGGCGCAGGAAGCCTTCCTTaGTGTAGCGGGCAAGCTGTG +
Preference number: 4 (lower is better)
Translates to: GTHSQTHTHTPCHAQHAGAGSLP*CSGQAV
Trigger: CACAGCTTGCCCGCTACACCAAGGAAGGCTTCCTGC...GCCTGCGTGCTGTGCGTGGCAGGGTGTGTGTGTGTGTGTCTGGCTGTGCGTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CCA 90 bp GCAGCTGCTGCTGCAAGAGATGAGACACAGGAGGGGACCCTGCCAGTCCCAGATCCTGCGGGGCCCTTGTaGCTGAGATCCTACTGCAGG +
Preference number: 4 (lower is better)
Translates to: AAAAARDETQEGTLPVPDPAGPL*LRSYCR
Trigger: CCTGCAGTAGGATCTCAGCCACAAGGGCCCCGCAGG...ATCTGGGACTGGCAGGGTCCCCTCCTGTGTCTCATCTCTTGCAGCAGCAGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR TCA 90 bp ATGGGACAGCCTCCCATCGGGGGCACCCCACAGGGCAGGGCTGAGACACATCCTCGAAGAACTTCCTGTTaGCCACGAACGAGCAGCCTA +
Preference number: 4 (lower is better)
Translates to: MGQPPIGGTPQGRAETHPRRTSC*PRTSSL
Trigger: TAGGCTGCTCGTTCGTGGTCAACAGGAAGTTCTTCG...AGGATGTGTCTCAGCCCTGCCCTGTGGGGTGCCCCCGATGGGAGGCTGTCCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR GCA 90 bp AGAGATGAGACACAGGAGGGGACCCTGCCAGTCCCAGATCCTGATTCTGGGATGGGCCCATCGAGCACCTaGCGGCCCCTTGCTGTCTCT +
Preference number: 4 (lower is better)
Translates to: RDETQEGTLPVPDPDSGMGPSST*RPLAVS
Trigger: AGAGACAGCAAGGGGCCGGCAGGTGCTCGATGGGCC...CATCCCAGAATCAGGATCTGGGACTGGCAGGGTCCCCTCCTGTGTCTCATCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR GCA 90 bp TCAGCATCGTCACACACTCCGGAACGCACAGCCAGACACACACACACACACCCTCATCCGGGGTCCCTGTaGTGCCCTGGAGAAGCCCTG +
Preference number: 4 (lower is better)
Translates to: SASSHTPERTARHTHTHPHPGSL*CPGEAL
Trigger: CAGGGCTTCTCCAGGGCAGCACAGGGACCCCGGATG...AGGGTGTGTGTGTGTGTGTCTGGCTGTGCGTTCCGGAGTGTGTGACGATGCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR GCA 90 bp ACGTCACCAAATGAGACACTGCGAATCCCACACAGGGCAAGGGGGCAGCTACAGCATCCGGGGTCCCTGTaGTGCCCTGGAGAAGCCCTG +
Preference number: 4 (lower is better)
Translates to: TSPNETLRIPHRARGQLQHPGSL*CPGEAL
Trigger: CAGGGCTTCTCCAGGGCAGCACAGGGACCCCGGATG...CTGTAGCTGCCCCCTTGCCCTGTGTGGGATTCGCAGTGTCTCATTTGGTGACGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR GCA 90 bp GCAGCTGCTGCTGCAAGAGATGAGACACAGGAGGGGACCCTGCCAGTCCCAGATGTGCCTGGTCCTCACTaGCTCCTTTTAGGGCGGGGA +
Preference number: 4 (lower is better)
Translates to: AAAAARDETQEGTLPVPDVPGPH*LLLGRG
Trigger: TCCCCGCCCTAAAAGGAGGCAGTGAGGACCAGGCAC...ATCTGGGACTGGCAGGGTCCCCTCCTGTGTCTCATCTCTTGCAGCAGCAGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CCA 90 bp GTAAGACGTCACCAAATGAGACACTGCGAATCCCACACAGGGCAAGGGGGCAGCCAAGTGGTTCGCCTCTaGACCTCTAGCCGCCGGCGC +
Preference number: 4 (lower is better)
Translates to: VRRHQMRHCESHTGQGGSQVVRL*TSSRRR
Trigger: GCGCCGGCGGCTAGAGGTCCAGAGGCGAACCACTTG...GCTGCCCCCTTGCCCTGTGTGGGATTCGCAGTGTCTCATTTGGTGACGTCTTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333538.10
CDS-3UTR CCA 90 bp AGGGCAGGGCTGAGACACATCCTTCCGGCCAGTGACATGGGGCCAAACCCACACGCTGGGAGGTCGGATTaGTGGTGGGGAGAACGGAAT +
Preference number: 4 (lower is better)
Translates to: RAGLRHILPASDMGPNPHAGRSD*WWGERN
Trigger: ATTCCGTTCTCCCCACCACCAATCCGACCTCCCAGC...GTGTGGGTTTGGCCCCATGTCACTGGCCGGAAGGATGTGTCTCAGCCCTGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333538.10
CDS-3UTR CCA 90 bp GAGAGGAAACGACTGCCTTCTCCTCTGCCAGCCAGCAGAGCGTGGGGTGAAATGTCCCAGCTGTACCCGTaGGCCGAGTTCTCGTACCGC +
Preference number: 4 (lower is better)
Translates to: ERKRLPSPLPASRAWGEMSQLYP*AEFSYR
Trigger: GCGGTACGAGAACTCGGCCCACGGGTACAGCTGGGA...CATTTCACCCCACGCTCTGCTGGCTGGCAGAGGAGAAGGCAGTCGTTTCCTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CCA 90 bp AGGTTCTGGATGGAGGACCGCTGCTTCTCCCCGGTGGCAGCCTCTGGGAGTCAGTTCTTCCGCTCAATGTaGGCCACCCGTGAGCAAGGA +
Preference number: 4 (lower is better)
Translates to: RFWMEDRCFSPVAASGSQFFRSM*ATREQG
Trigger: TCCTTGCTCACGGGTGGCCCACATTGAGCGGAAGAA...CTGACTCCCAGAGGCTGCCACCGGGGAGAAGCAGCGGTCCTCCATCCAGAACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CCA 90 bp TCAGCATCGTCACACACTCCGGAACGCACAGCCAGACACACACACACACACCCTGTAGCGGGCAAGCTGTaGTCCCCAGCCATGGCACGG +
Preference number: 4 (lower is better)
Translates to: SASSHTPERTARHTHTHPVAGKL*SPAMAR
Trigger: CCGTGCCATGGCTGGGGACCACAGCTTGCCCGCTAC...AGGGTGTGTGTGTGTGTGTCTGGCTGTGCGTTCCGGAGTGTGTGACGATGCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CCA 90 bp AGGTTCTGGATGGAGGACCGCTGCTTCTCCCCGGTGGCAGCCTCTGGGAGTCAGGGTGCAGGAAACTTGTaGGCAGCTGAATGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: RFWMEDRCFSPVAASGSQGAGNL*AAECLR
Trigger: CCTCAGGCATTCAGCTGCCCACAAGTTTCCTGCACC...CTGACTCCCAGAGGCTGCCACCGGGGAGAAGCAGCGGTCCTCCATCCAGAACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CCA 90 bp ACGTCACCAAATGAGACACTGCGAATCCCACACAGGGCAAGGGGGCAGCTACAGGCTGCTTCTCCCCGGTaGCAGCCTCTGGGAGTCAGG +
Preference number: 4 (lower is better)
Translates to: TSPNETLRIPHRARGQLQAASPR*QPLGVR
Trigger: CCTGACTCCCAGAGGCTGCCACCGGGGAGAAGCAGC...CTGTAGCTGCCCCCTTGCCCTGTGTGGGATTCGCAGTGTCTCATTTGGTGACGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CCA 90 bp AGGTTCTGGATGGAGGACCGCTGCTTCTCCCCGGTGGCAGCCTCTGGGAGTCAGTCAGCCCTTAGGTTCTaGATGGAGGACCGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: RFWMEDRCFSPVAASGSQSALRF*MEDRCF
Trigger: GAAGCAGCGGTCCTCCATCCAGAACCTAAGGGCTGA...CTGACTCCCAGAGGCTGCCACCGGGGAGAAGCAGCGGTCCTCCATCCAGAACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CCA 90 bp GCAGCTGCTGCTGCAAGAGATGAGACACAGGAGGGGACCCTGCCAGTCCCAGATTACAGGGTTCAGCTCTaGGCAGGGCTTGGCCAGGGA +
Preference number: 4 (lower is better)
Translates to: AAAAARDETQEGTLPVPDYRVQL*AGLGQG
Trigger: TCCCTGGCCAAGCCCTGCCCAGAGCTGAACCCTGTA...ATCTGGGACTGGCAGGGTCCCCTCCTGTGTCTCATCTCTTGCAGCAGCAGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR TCA 90 bp ACGTCACCAAATGAGACACTGCGAATCCCACACAGGGCAAGGGGGCAGCTACAGGTGTGGGCGTGTGATTaGCGGCACTGTGCACGGACC +
Preference number: 4 (lower is better)
Translates to: TSPNETLRIPHRARGQLQVWACD*RHCART
Trigger: GGTCCGTGCACAGTGCCGTCAATCACACGCCCACAC...CTGTAGCTGCCCCCTTGCCCTGTGTGGGATTCGCAGTGTCTCATTTGGTGACGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR TCA 90 bp CTGGCAGCCTTTGCTTCAGCCCTTAGGTTCTGGATGGAGGACCGCTGCTTCTCCTGCCTCCCACCGTGTTaGTGGCTGGAGTTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: LAAFASALRFWMEDRCFSCLPPC*WLEFSS
Trigger: GCTGCTGAACTCCAGCCATCAACACGGTGGGAGGCA...GGAGAAGCAGCGGTCCTCCATCCAGAACCTAAGGGCTGAAGCAAAGGCTGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR TCA 90 bp GGAACGCACAGCCAGACACACACACACACACCCTGCCACGCACAGCACGCAGGCGAGCGTGGGGTGAAATaGGGTGAGCCAAAAGCATCT +
Preference number: 4 (lower is better)
Translates to: GTHSQTHTHTPCHAQHAGERGVK*GEPKAS
Trigger: AGATGCTTTTGGCTCACCTCATTTCACCCCACGCTC...GCCTGCGTGCTGTGCGTGGCAGGGTGTGTGTGTGTGTGTCTGGCTGTGCGTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR TCA 90 bp GGAACGCACAGCCAGACACACACACACACACCCTGCCACGCACAGCACGCAGGCGATGGGGTGAGGAGATaGTCACCAGTAAGACGTCAC +
Preference number: 4 (lower is better)
Translates to: GTHSQTHTHTPCHAQHAGDGVRR*SPVRRH
Trigger: GTGACGTCTTACTGGTGATCATCTCCTCACCCCATC...GCCTGCGTGCTGTGCGTGGCAGGGTGTGTGTGTGTGTGTCTGGCTGTGCGTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR GCA 90 bp TTGCTTCAGCCCTTAGGTTCTGGATGGAGGACCGCTGCTTCTCCCCGGTGGCAGAAGAAGCCAGTGACCTaGCCGGTAGCCACCTTCCAG +
Preference number: 4 (lower is better)
Translates to: LLQPLGSGWRTAASPRWQKKPVT*PVATFQ
Trigger: CTGGAAGGTGGCTACCGGGCAGGTCACTGGCTTCTT...CTGCCACCGGGGAGAAGCAGCGGTCCTCCATCCAGAACCTAAGGGCTGAAGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR GCA 90 bp ATGGGACAGCCTCCCATCGGGGGCACCCCACAGGGCAGGGCTGAGACACATCCTGAGTTCTCGTACCGCTaGACCTCAAAGTTGTCCTGT +
Preference number: 4 (lower is better)
Translates to: MGQPPIGGTPQGRAETHPEFSYR*TSKLSC
Trigger: ACAGGACAACTTTGAGGTGCAGCGGTACGAGAACTC...AGGATGTGTCTCAGCCCTGCCCTGTGGGGTGCCCCCGATGGGAGGCTGTCCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR GCA 90 bp TTGCTTCAGCCCTTAGGTTCTGGATGGAGGACCGCTGCTTCTCCCCGGTGGCAGAGTCCAGAGCTGCAGTaGCCAAAGCTACCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: LLQPLGSGWRTAASPRWQSPELQ*PKLPWW
Trigger: CCACCAGGGTAGCTTTGGGCACTGCAGCTCTGGACT...CTGCCACCGGGGAGAAGCAGCGGTCCTCCATCCAGAACCTAAGGGCTGAAGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CCA 90 bp AGGTGTCATCTGGGTAGAAGTAACCTCGGAGGAAATAGTGCCTGGTCCTCACTGCGCGGCCGGATCTCGTaGAAGGCGTCTCCGCTGCGC +
Preference number: 4 (lower is better)
Translates to: RCHLGRSNLGGNSAWSSLRGRIS*KASPLR
Trigger: GCGCAGCGGAGACGCCTTCCACGAGATCCGGCCGCG...CAGTGAGGACCAGGCACTATTTCCTCCGAGGTTACTTCTACCCAGATGACACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333538.10
CDS-3UTR CCA 90 bp ACGTCACCAAATGAGACACTGCGAATCCCACACAGGGCAAGGGGGCAGCTACAGTCCCAGCTGTACCCGTaGGCCGAGTTCTCGTACCGC +
Preference number: 4 (lower is better)
Translates to: TSPNETLRIPHRARGQLQSQLYP*AEFSYR
Trigger: GCGGTACGAGAACTCGGCCCACGGGTACAGCTGGGA...CTGTAGCTGCCCCCTTGCCCTGTGTGGGATTCGCAGTGTCTCATTTGGTGACGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CCA 90 bp TTGCTTCAGCCCTTAGGTTCTGGATGGAGGACCGCTGCTTCTCCCCGGTGGCAGGCAGCCTATCATGGCTaGGGTCCTGATGGGGAGAGA +
Preference number: 4 (lower is better)
Translates to: LLQPLGSGWRTAASPRWQAAYHG*GPDGER
Trigger: TCTCTCCCCATCAGGACCCCAGCCATGATAGGCTGC...CTGCCACCGGGGAGAAGCAGCGGTCCTCCATCCAGAACCTAAGGGCTGAAGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CCA 90 bp GCAGCTGCTGCTGCAAGAGATGAGACACAGGAGGGGACCCTGCCAGTCCCAGATGCAGGAAGCCTTCCTTaGTGTAGCGGGCAAGCTGTG +
Preference number: 4 (lower is better)
Translates to: AAAAARDETQEGTLPVPDAGSLP*CSGQAV
Trigger: CACAGCTTGCCCGCTACACCAAGGAAGGCTTCCTGC...ATCTGGGACTGGCAGGGTCCCCTCCTGTGTCTCATCTCTTGCAGCAGCAGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CCA 90 bp AGAGATGAGACACAGGAGGGGACCCTGCCAGTCCCAGATCCTGATTCTGGGATGTGTCAGGGAGGAGTGTaGTGGTCCCCAGGGCACCCA +
Preference number: 4 (lower is better)
Translates to: RDETQEGTLPVPDPDSGMCQGGV*WSPGHP
Trigger: TGGGTGCCCTGGGGACCACCACACTCCTCCCTGACA...CATCCCAGAATCAGGATCTGGGACTGGCAGGGTCCCCTCCTGTGTCTCATCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CCA 90 bp GTAAGACGTCACCAAATGAGACACTGCGAATCCCACACAGGGCAAGGGGGCAGCTGTCAGGGAGGAGTGTaGTGGTCCCCAGGGCACCCA +
Preference number: 4 (lower is better)
Translates to: VRRHQMRHCESHTGQGGSCQGGV*WSPGHP
Trigger: TGGGTGCCCTGGGGACCACCACACTCCTCCCTGACA...GCTGCCCCCTTGCCCTGTGTGGGATTCGCAGTGTCTCATTTGGTGACGTCTTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CCA 90 bp GTAAGACGTCACCAAATGAGACACTGCGAATCCCACACAGGGCAAGGGGGCAGCGGGGCAGCCGACTCTTaGAGTTGTCCACCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: VRRHQMRHCESHTGQGGSGAADS*SCPPGS
Trigger: GCTGCCTGGTGGACAACTCCAAGAGTCGGCTGCCCC...GCTGCCCCCTTGCCCTGTGTGGGATTCGCAGTGTCTCATTTGGTGACGTCTTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CCA 90 bp ATGGGACAGCCTCCCATCGGGGGCACCCCACAGGGCAGGGCTGAGACACATCCTGATGTGGAGGAGAACTaGACAGTCTTGCTCCTCAGT +
Preference number: 4 (lower is better)
Translates to: MGQPPIGGTPQGRAETHPDVEEN*TVLLLS
Trigger: ACTGAGGAGCAAGACTGTCCAGTTCTCCTCCACATC...AGGATGTGTCTCAGCCCTGCCCTGTGGGGTGCCCCCGATGGGAGGCTGTCCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CCA 90 bp CTGGGATGGGAGATGTGGAGGAGAACTGGACAGTCTTGCTCCTCAGTACCAGGTCGGGGAGCTAGGACATaGCTGAAGCCCCCGCTGCCT +
Preference number: 4 (lower is better)
Translates to: LGWEMWRRTGQSCSSVPGRGART*LKPPLP
Trigger: AGGCAGCGGGGGCTTCAGCCATGTCCTAGCTCCCCG...ACCTGGTACTGAGGAGCAAGACTGTCCAGTTCTCCTCCACATCTCCCATCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CCA 90 bp GGAACGCACAGCCAGACACACACACACACACCCTGCCACGCACAGCACGCAGGCCAGGCAGGTGTCATCTaGGTAGAAGTAACCTCGGAG +
Preference number: 4 (lower is better)
Translates to: GTHSQTHTHTPCHAQHAGQAGVI*VEVTSE
Trigger: CTCCGAGGTTACTTCTACCCAGATGACACCTGCCTG...GCCTGCGTGCTGTGCGTGGCAGGGTGTGTGTGTGTGTGTCTGGCTGTGCGTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CCA 90 bp TCAGCATCGTCACACACTCCGGAACGCACAGCCAGACACACACACACACACCCTCCTGCGGGGCCCTTGTaGCTGAGATCCTACTGCAGG +
Preference number: 4 (lower is better)
Translates to: SASSHTPERTARHTHTHPPAGPL*LRSYCR
Trigger: CCTGCAGTAGGATCTCAGCCACAAGGGCCCCGCAGG...AGGGTGTGTGTGTGTGTGTCTGGCTGTGCGTTCCGGAGTGTGTGACGATGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CCA 90 bp GCAGCTGCTGCTGCAAGAGATGAGACACAGGAGGGGACCCTGCCAGTCCCAGATTTCCGGCCAGTGACATaGGGCCAAACCCACACCCTT +
Preference number: 4 (lower is better)
Translates to: AAAAARDETQEGTLPVPDFRPVT*GQTHTL
Trigger: AAGGGTGTGGGTTTGGCCCCATGTCACTGGCCGGAA...ATCTGGGACTGGCAGGGTCCCCTCCTGTGTCTCATCTCTTGCAGCAGCAGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
3UTR CAA 72 bp CTACCCTGGTGGGAAGGGTTAGGGGCAGTAGCTGCCTaGGGGCGTGAACAGGCAGGTGTCATCTGGGTAGAA +
Preference number: 4 (lower is better)
Translates to: LPWWEGLGAVAA*GREQAGVIWVE
Trigger: TTCTACCCAGATGACACCTGCCTGTTCACGCCCCAAGGCAGCTACTGCCCCTAACCCTTCCCACCAGGGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR TCA 90 bp GACAGTCTTGCTCCTCAGTACCAGGTCCACATCAGAGGCTGTGGAAGACAGCTGGTGTGGGCGTGTGATTaGCGGCACTGTGCACGGACC +
Preference number: 4 (lower is better)
Translates to: DSLAPQYQVHIRGCGRQLVWACD*RHCART
Trigger: GGTCCGTGCACAGTGCCGTCAATCACACGCCCACAC...CAGCTGTCTTCCACAGCCTCTGATGTGGACCTGGTACTGAGGAGCAAGACTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR TCA 90 bp TCAGCATCGTCACACACTCCGGAACGCACAGCCAGACACACACACACACACCCTAGGTGTGTGGGCGTGTaGTTGACGGCACTGTGCACG +
Preference number: 4 (lower is better)
Translates to: SASSHTPERTARHTHTHPRCVGV*LTALCT
Trigger: CGTGCACAGTGCCGTCAATCACACGCCCACACACCT...AGGGTGTGTGTGTGTGTGTCTGGCTGTGCGTTCCGGAGTGTGTGACGATGCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR TCA 90 bp ACGTCACCAAATGAGACACTGCGAATCCCACACAGGGCAAGGGGGCAGCTACAGAGGTGTGTGGGCGTGTaGTTGACGGCACTGTGCACG +
Preference number: 4 (lower is better)
Translates to: TSPNETLRIPHRARGQLQRCVGV*LTALCT
Trigger: CGTGCACAGTGCCGTCAATCACACGCCCACACACCT...CTGTAGCTGCCCCCTTGCCCTGTGTGGGATTCGCAGTGTCTCATTTGGTGACGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR TCA 90 bp CTGGCAGCCTTTGCTTCAGCCCTTAGGTTCTGGATGGAGGACCGCTGCTTCTCCAATGTGGGCCACCCGTaGGCAAGGAAGGACCTCCAT +
Preference number: 4 (lower is better)
Translates to: LAAFASALRFWMEDRCFSNVGHP*ARKDLH
Trigger: ATGGAGGTCCTTCCTTGCTCACGGGTGGCCCACATT...GGAGAAGCAGCGGTCCTCCATCCAGAACCTAAGGGCTGAAGCAAAGGCTGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR TCA 90 bp GTAAGACGTCACCAAATGAGACACTGCGAATCCCACACAGGGCAAGGGGGCAGCCGGGGCCCTTGTGGCTaGGATCCTACTGCAGGCTTA +
Preference number: 4 (lower is better)
Translates to: VRRHQMRHCESHTGQGGSRGPCG*DPTAGL
Trigger: TAAGCCTGCAGTAGGATCTCAGCCACAAGGGCCCCG...GCTGCCCCCTTGCCCTGTGTGGGATTCGCAGTGTCTCATTTGGTGACGTCTTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR TCA 90 bp GCAGCTGCTGCTGCAAGAGATGAGACACAGGAGGGGACCCTGCCAGTCCCAGATCAGCAGAGCGTGGGGTaGAATGAGGTGAGCCAAAAG +
Preference number: 4 (lower is better)
Translates to: AAAAARDETQEGTLPVPDQQSVG*NEVSQK
Trigger: CTTTTGGCTCACCTCATTTCACCCCACGCTCTGCTG...ATCTGGGACTGGCAGGGTCCCCTCCTGTGTCTCATCTCTTGCAGCAGCAGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR GCA 90 bp TTGCTTCAGCCCTTAGGTTCTGGATGGAGGACCGCTGCTTCTCCCCGGTGGCAGTCCGGTTTTCCTGGATaGGGGATAGAACCGGCTCAG +
Preference number: 4 (lower is better)
Translates to: LLQPLGSGWRTAASPRWQSGFPG*GIEPAQ
Trigger: CTGAGCCGGTTCTATCCCGCATCCAGGAAAACCGGA...CTGCCACCGGGGAGAAGCAGCGGTCCTCCATCCAGAACCTAAGGGCTGAAGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR GCA 90 bp GAGAGGAAACGACTGCCTTCTCCTCTGCCAGCCAGCAGAGCGTGGGGTGAAATGGGGGCTTTTCCAGGGTaGAGGAAACTTGTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: ERKRLPSPLPASRAWGEMGAFPG*RKLVGS
Trigger: GCTGCCCACAAGTTTCCTGCACCCTGGAAAAGCCCC...CATTTCACCCCACGCTCTGCTGGCTGGCAGAGGAGAAGGCAGTCGTTTCCTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR GCA 90 bp AGGTTCTGGATGGAGGACCGCTGCTTCTCCCCGGTGGCAGCCTCTGGGAGTCAGAGAACTGGACAGTCTTaGTCCTCAGTACCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: RFWMEDRCFSPVAASGSQRTGQS*SSVPGP
Trigger: TGGACCTGGTACTGAGGAGCAAGACTGTCCAGTTCT...CTGACTCCCAGAGGCTGCCACCGGGGAGAAGCAGCGGTCCTCCATCCAGAACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR GCA 90 bp ATGGGACAGCCTCCCATCGGGGGCACCCCACAGGGCAGGGCTGAGACACATCCTTGGCTGAGATCCTACTaGAGGCTTAGCCTATTTCTG +
Preference number: 4 (lower is better)
Translates to: MGQPPIGGTPQGRAETHPWLRSY*RLSLFL
Trigger: CAGAAATAGGCTAAGCCTGCAGTAGGATCTCAGCCA...AGGATGTGTCTCAGCCCTGCCCTGTGGGGTGCCCCCGATGGGAGGCTGTCCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR GCA 90 bp GTCATCTGGGTAGAAGTAACCTCGGAGGAAATAGTGCCTGGTCCTCACTGCCTCTGGATGGAGGACCGCTaGTTCTCCCCGGTGGCAGCC +
Preference number: 4 (lower is better)
Translates to: VIWVEVTSEEIVPGPHCLWMEDR*FSPVAA
Trigger: GGCTGCCACCGGGGAGAAGCAGCGGTCCTCCATCCA...GAGGCAGTGAGGACCAGGCACTATTTCCTCCGAGGTTACTTCTACCCAGATGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR GCA 90 bp GACAGTCTTGCTCCTCAGTACCAGGTCCACATCAGAGGCTGTGGAAGACAGCTGGACTGCCTTCTCCTCTaGCAGCCAGCAGAGCGTGGG +
Preference number: 4 (lower is better)
Translates to: DSLAPQYQVHIRGCGRQLDCLLL*QPAERG
Trigger: CCCACGCTCTGCTGGCTGGCAGAGGAGAAGGCAGTC...CAGCTGTCTTCCACAGCCTCTGATGTGGACCTGGTACTGAGGAGCAAGACTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CCA 90 bp TTGCTTCAGCCCTTAGGTTCTGGATGGAGGACCGCTGCTTCTCCCCGGTGGCAGAGGTCGGATTGGTGGTaGGGAGAACGGAATCGCTCA +
Preference number: 4 (lower is better)
Translates to: LLQPLGSGWRTAASPRWQRSDWW*GERNRS
Trigger: TGAGCGATTCCGTTCTCCCCACCACCAATCCGACCT...CTGCCACCGGGGAGAAGCAGCGGTCCTCCATCCAGAACCTAAGGGCTGAAGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333538.10
CDS-3UTR CCA 90 bp AGAGATGAGACACAGGAGGGGACCCTGCCAGTCCCAGATCCTGATTCTGGGATGGGGAGGTCGGATTGGTaGTGGGGAGAACGGAATCGC +
Preference number: 4 (lower is better)
Translates to: RDETQEGTLPVPDPDSGMGRSDW*WGERNR
Trigger: GCGATTCCGTTCTCCCCACCACCAATCCGACCTCCC...CATCCCAGAATCAGGATCTGGGACTGGCAGGGTCCCCTCCTGTGTCTCATCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333538.10
CDS-3UTR CCA 90 bp CCTGATTCTGGGATGGGAGATGTGGAGGAGAACTGGACAGTCTTGCTCCTCAGTGTAGCGGGCAAGCTGTaGTCCCCAGCCATGGCACGG +
Preference number: 4 (lower is better)
Translates to: PDSGMGDVEENWTVLLLSVAGKL*SPAMAR
Trigger: CCGTGCCATGGCTGGGGACCACAGCTTGCCCGCTAC...ACTGAGGAGCAAGACTGTCCAGTTCTCCTCCACATCTCCCATCCCAGAATCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CCA 90 bp GAGAGGAAACGACTGCCTTCTCCTCTGCCAGCCAGCAGAGCGTGGGGTGAAATGAGCTGGTCCAGATGTTaGGGGGAGCAGCCATGTCCT +
Preference number: 4 (lower is better)
Translates to: ERKRLPSPLPASRAWGEMSWSRC*GEQPCP
Trigger: AGGACATGGCTGCTCCCCCCAACATCTGGACCAGCT...CATTTCACCCCACGCTCTGCTGGCTGGCAGAGGAGAAGGCAGTCGTTTCCTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CCA 90 bp GCAGCTGCTGCTGCAAGAGATGAGACACAGGAGGGGACCCTGCCAGTCCCAGATCCAAAGCTACCCTGGTaGGAAGGGTTAGGGGCAGTA +
Preference number: 4 (lower is better)
Translates to: AAAAARDETQEGTLPVPDPKLPW*EGLGAV
Trigger: TACTGCCCCTAACCCTTCCCACCAGGGTAGCTTTGG...ATCTGGGACTGGCAGGGTCCCCTCCTGTGTCTCATCTCTTGCAGCAGCAGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CCA 90 bp GCAGCTGCTGCTGCAAGAGATGAGACACAGGAGGGGACCCTGCCAGTCCCAGATTGGCCAGGGACAGTGTaGGGAAAAAGAGATGGGGAC +
Preference number: 4 (lower is better)
Translates to: AAAAARDETQEGTLPVPDWPGTV*GKRDGD
Trigger: GTCCCCATCTCTTTTTCCCCACACTGTCCCTGGCCA...ATCTGGGACTGGCAGGGTCCCCTCCTGTGTCTCATCTCTTGCAGCAGCAGCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR TCA 90 bp CTGGGATGGGAGATGTGGAGGAGAACTGGACAGTCTTGCTCCTCAGTACCAGGTCAGCCCAGCCAGCGGTaGATTCCACGTGGGCATCAA +
Preference number: 4 (lower is better)
Translates to: LGWEMWRRTGQSCSSVPGQPSQR*IPRGHQ
Trigger: TTGATGCCCACGTGGAATTCACCGCTGGCTGGGCTG...ACCTGGTACTGAGGAGCAAGACTGTCCAGTTCTCCTCCACATCTCCCATCCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR TCA 90 bp AGGTGTCATCTGGGTAGAAGTAACCTCGGAGGAAATAGTGCCTGGTCCTCACTGTGCAGCTGCGGAGGATaGGGTCGATGCCAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: RCHLGRSNLGGNSAWSSLCSCGG*GRCQPG
Trigger: GCCTGGCTGGCATCGACCTCATCCTCCGCAGCTGCA...CAGTGAGGACCAGGCACTATTTCCTCCGAGGTTACTTCTACCCAGATGACACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR TCA 90 bp ACGTCACCAAATGAGACACTGCGAATCCCACACAGGGCAAGGGGGCAGCTACAGTGCTGCTGCAAGAGATaGGACACAGGAGGGGACCCT +
Preference number: 4 (lower is better)
Translates to: TSPNETLRIPHRARGQLQCCCKR*DTGGDP
Trigger: AGGGTCCCCTCCTGTGTCTCATCTCTTGCAGCAGCA...CTGTAGCTGCCCCCTTGCCCTGTGTGGGATTCGCAGTGTCTCATTTGGTGACGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR TCA 90 bp GTAAGACGTCACCAAATGAGACACTGCGAATCCCACACAGGGCAAGGGGGCAGCTGCTGCTGCAAGAGATaGGACACAGGAGGGGACCCT +
Preference number: 4 (lower is better)
Translates to: VRRHQMRHCESHTGQGGSCCCKR*DTGGDP
Trigger: AGGGTCCCCTCCTGTGTCTCATCTCTTGCAGCAGCA...GCTGCCCCCTTGCCCTGTGTGGGATTCGCAGTGTCTCATTTGGTGACGTCTTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR TCA 90 bp GACAGTCTTGCTCCTCAGTACCAGGTCCACATCAGAGGCTGTGGAAGACAGCTGAGCTGCCTTGGGGCGTaGACAGGCAGGTGTCATCTG +
Preference number: 4 (lower is better)
Translates to: DSLAPQYQVHIRGCGRQLSCLGA*TGRCHL
Trigger: CAGATGACACCTGCCTGTTCACGCCCCAAGGCAGCT...CAGCTGTCTTCCACAGCCTCTGATGTGGACCTGGTACTGAGGAGCAAGACTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR TCA 90 bp GACAGTCTTGCTCCTCAGTACCAGGTCCACATCAGAGGCTGTGGAAGACAGCTGCATCCTTCCGGCCAGTaGCATGGGGCCAAACCCACA +
Preference number: 4 (lower is better)
Translates to: DSLAPQYQVHIRGCGRQLHPSGQ*HGAKPT
Trigger: TGTGGGTTTGGCCCCATGTCACTGGCCGGAAGGATG...CAGCTGTCTTCCACAGCCTCTGATGTGGACCTGGTACTGAGGAGCAAGACTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR TCA 90 bp CTGGGATGGGAGATGTGGAGGAGAACTGGACAGTCTTGCTCCTCAGTACCAGGTCATCCTTCCGGCCAGTaGCATGGGGCCAAACCCACA +
Preference number: 4 (lower is better)
Translates to: LGWEMWRRTGQSCSSVPGHPSGQ*HGAKPT
Trigger: TGTGGGTTTGGCCCCATGTCACTGGCCGGAAGGATG...ACCTGGTACTGAGGAGCAAGACTGTCCAGTTCTCCTCCACATCTCCCATCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR GCA 90 bp GTCATCTGGGTAGAAGTAACCTCGGAGGAAATAGTGCCTGGTCCTCACTGCCTCCTCGCTCTGCAGAAGTaGTCCCCGAGACGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: VIWVEVTSEEIVPGPHCLLALQK*SPRRLL
Trigger: GAGCAGGCGTCTCGGGGAGCACTTCTGCAGAGCGAG...GAGGCAGTGAGGACCAGGCACTATTTCCTCCGAGGTTACTTCTACCCAGATGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333538.10
CDS-3UTR GCA 90 bp GTAAGACGTCACCAAATGAGACACTGCGAATCCCACACAGGGCAAGGGGGCAGCAGGGATCCAAGCCCCTaGTCGTCCCACCTCAAGGAT +
Preference number: 4 (lower is better)
Translates to: VRRHQMRHCESHTGQGGSRDPSP*SSHLKD
Trigger: ATCCTTGAGGTGGGACGAGCAGGGGCTTGGATCCCT...GCTGCCCCCTTGCCCTGTGTGGGATTCGCAGTGTCTCATTTGGTGACGTCTTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333538.10
CDS-3UTR GCA 90 bp GGAACGCACAGCCAGACACACACACACACACCCTGCCACGCACAGCACGCAGGCCTCCGTATACATCCATaGCAGGATCCAGAAGACCAA +
Preference number: 4 (lower is better)
Translates to: GTHSQTHTHTPCHAQHAGLRIHP*QDPEDQ
Trigger: TTGGTCTTCTGGATCCTGGCATGGATGTATACGGAG...GCCTGCGTGCTGTGCGTGGCAGGGTGTGTGTGTGTGTGTCTGGCTGTGCGTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR GCA 90 bp CTGGCAGCCTTTGCTTCAGCCCTTAGGTTCTGGATGGAGGACCGCTGCTTCTCCAAGGAAGGACCTCCATaGTGCCCCCACAGAGCCATA +
Preference number: 4 (lower is better)
Translates to: LAAFASALRFWMEDRCFSKEGPP*CPHRAI
Trigger: TATGGCTCTGTGGGGGCAGCATGGAGGTCCTTCCTT...GGAGAAGCAGCGGTCCTCCATCCAGAACCTAAGGGCTGAAGCAAAGGCTGCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR GCA 90 bp AGGGCAGGGCTGAGACACATCCTTCCGGCCAGTGACATGGGGCCAAACCCACACGCACGGATACAATATTaGTGTGTGGTTCTCCAGCGG +
Preference number: 4 (lower is better)
Translates to: RAGLRHILPASDMGPNPHARIQY*CVVLQR
Trigger: CCGCTGGAGAACCACACAGCAATATTGTATCCGTGC...GTGTGGGTTTGGCCCCATGTCACTGGCCGGAAGGATGTGTCTCAGCCCTGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CCA 90 bp GAGAGGAAACGACTGCCTTCTCCTCTGCCAGCCAGCAGAGCGTGGGGTGAAATGTTCTTCCGCTCAATGTaGGCCACCCGTGAGCAAGGA +
Preference number: 4 (lower is better)
Translates to: ERKRLPSPLPASRAWGEMFFRSM*ATREQG
Trigger: TCCTTGCTCACGGGTGGCCCACATTGAGCGGAAGAA...CATTTCACCCCACGCTCTGCTGGCTGGCAGAGGAGAAGGCAGTCGTTTCCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CCA 90 bp GTAAGACGTCACCAAATGAGACACTGCGAATCCCACACAGGGCAAGGGGGCAGCAGCTGGTCCAGATGTTaGGGGGAGCAGCCATGTCCT +
Preference number: 4 (lower is better)
Translates to: VRRHQMRHCESHTGQGGSSWSRC*GEQPCP
Trigger: AGGACATGGCTGCTCCCCCCAACATCTGGACCAGCT...GCTGCCCCCTTGCCCTGTGTGGGATTCGCAGTGTCTCATTTGGTGACGTCTTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CCA 90 bp CTGGCAGCCTTTGCTTCAGCCCTTAGGTTCTGGATGGAGGACCGCTGCTTCTCCCACCGTGTTGATGGCTaGAGTTCAGCAGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: LAAFASALRFWMEDRCFSHRVDG*SSAAAA
Trigger: AGCAGCAGCTGCTGAACTCCAGCCATCAACACGGTG...GGAGAAGCAGCGGTCCTCCATCCAGAACCTAAGGGCTGAAGCAAAGGCTGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CCA 90 bp GAGAGGAAACGACTGCCTTCTCCTCTGCCAGCCAGCAGAGCGTGGGGTGAAATGCCAAAGCTACCCTGGTaGGAAGGGTTAGGGGCAGTA +
Preference number: 4 (lower is better)
Translates to: ERKRLPSPLPASRAWGEMPKLPW*EGLGAV
Trigger: TACTGCCCCTAACCCTTCCCACCAGGGTAGCTTTGG...CATTTCACCCCACGCTCTGCTGGCTGGCAGAGGAGAAGGCAGTCGTTTCCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CCA 90 bp ACGTCACCAAATGAGACACTGCGAATCCCACACAGGGCAAGGGGGCAGCTACAGCCCTTAGGTTCTGGATaGAGGACCGCTGCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: TSPNETLRIPHRARGQLQPLGSG*RTAASP
Trigger: GGGAGAAGCAGCGGTCCTCCATCCAGAACCTAAGGG...CTGTAGCTGCCCCCTTGCCCTGTGTGGGATTCGCAGTGTCTCATTTGGTGACGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CCA 90 bp AGAGATGAGACACAGGAGGGGACCCTGCCAGTCCCAGATCCTGATTCTGGGATGTTCCGGCCAGTGACATaGGGCCAAACCCACACCCTT +
Preference number: 4 (lower is better)
Translates to: RDETQEGTLPVPDPDSGMFRPVT*GQTHTL
Trigger: AAGGGTGTGGGTTTGGCCCCATGTCACTGGCCGGAA...CATCCCAGAATCAGGATCTGGGACTGGCAGGGTCCCCTCCTGTGTCTCATCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR TCA 90 bp CCTGATTCTGGGATGGGAGATGTGGAGGAGAACTGGACAGTCTTGCTCCTCAGTTCATGGCTGGGGTCCTaGTGGGGAGAGAAGGGTCTC +
Preference number: 4 (lower is better)
Translates to: PDSGMGDVEENWTVLLLSSWLGS*WGEKGL
Trigger: GAGACCCTTCTCTCCCCATCAGGACCCCAGCCATGA...ACTGAGGAGCAAGACTGTCCAGTTCTCCTCCACATCTCCCATCCCAGAATCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR TCA 90 bp AGAGATGAGACACAGGAGGGGACCCTGCCAGTCCCAGATCCTGATTCTGGGATGTGTACAGGCTGCTCTTaGCCTTGTCGCAGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: RDETQEGTLPVPDPDSGMCTGCS*PCRSPG
Trigger: TCCTGGACTGCGACAAGGTCAAGAGCAGCCTGTACA...CATCCCAGAATCAGGATCTGGGACTGGCAGGGTCCCCTCCTGTGTCTCATCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR TCA 90 bp GCAGCTGCTGCTGCAAGAGATGAGACACAGGAGGGGACCCTGCCAGTCCCAGATTGGCTCCATTCTGGATaGAGTTCCAGCGCTTGTACA +
Preference number: 4 (lower is better)
Translates to: AAAAARDETQEGTLPVPDWLHSG*SSSACT
Trigger: TGTACAAGCGCTGGAACTTCATCCAGAATGGAGCCA...ATCTGGGACTGGCAGGGTCCCCTCCTGTGTCTCATCTCTTGCAGCAGCAGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR TCA 90 bp TCAGCATCGTCACACACTCCGGAACGCACAGCCAGACACACACACACACACCCTGCCAGTCCCAGATCCTaGTTCTGGGATGGGAGATGT +
Preference number: 4 (lower is better)
Translates to: SASSHTPERTARHTHTHPASPRS*FWDGRC
Trigger: ACATCTCCCATCCCAGAATCAGGATCTGGGACTGGC...AGGGTGTGTGTGTGTGTGTCTGGCTGTGCGTTCCGGAGTGTGTGACGATGCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR GCA 90 bp GAGGAGAACTGGACAGTCTTGCTCCTCAGTACCAGGTCCACATCAGAGGCTGTGAAGAAGCCAGTGACCTaGCCGGTAGCCACCTTCCAG +
Preference number: 4 (lower is better)
Translates to: EENWTVLLLSTRSTSEAVKKPVT*PVATFQ
Trigger: CTGGAAGGTGGCTACCGGGCAGGTCACTGGCTTCTT...CACAGCCTCTGATGTGGACCTGGTACTGAGGAGCAAGACTGTCCAGTTCTCCTC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR GCA 90 bp TCAGCATCGTCACACACTCCGGAACGCACAGCCAGACACACACACACACACCCTAAGGAAGGACCTCCATaGTGCCCCCACAGAGCCATA +
Preference number: 4 (lower is better)
Translates to: SASSHTPERTARHTHTHPKEGPP*CPHRAI
Trigger: TATGGCTCTGTGGGGGCAGCATGGAGGTCCTTCCTT...AGGGTGTGTGTGTGTGTGTCTGGCTGTGCGTTCCGGAGTGTGTGACGATGCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR GCA 90 bp AGAGATGAGACACAGGAGGGGACCCTGCCAGTCCCAGATCCTGATTCTGGGATGCAGAGAGGAAACGACTaGCTTCTCCTCTGCCAGCCA +
Preference number: 4 (lower is better)
Translates to: RDETQEGTLPVPDPDSGMQRGND*LLLCQP
Trigger: TGGCTGGCAGAGGAGAAGGCAGTCGTTTCCTCTCTG...CATCCCAGAATCAGGATCTGGGACTGGCAGGGTCCCCTCCTGTGTCTCATCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CCA 90 bp GCAGCTGCTGCTGCAAGAGATGAGACACAGGAGGGGACCCTGCCAGTCCCAGATGCTCCTTACACTTGGTaGGACGATAATCCGGAATGG +
Preference number: 4 (lower is better)
Translates to: AAAAARDETQEGTLPVPDAPYTW*DDNPEW
Trigger: CCATTCCGGATTATCGTCCCACCAAGTGTAAGGAGC...ATCTGGGACTGGCAGGGTCCCCTCCTGTGTCTCATCTCTTGCAGCAGCAGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CCA 90 bp AGGTTCTGGATGGAGGACCGCTGCTTCTCCCCGGTGGCAGCCTCTGGGAGTCAGAATATGATGGATATCTaGGGCAGGTCCTTGGAGTAC +
Preference number: 4 (lower is better)
Translates to: RFWMEDRCFSPVAASGSQNMMDI*GRSLEY
Trigger: GTACTCCAAGGACCTGCCCCAGATATCCATCATATT...CTGACTCCCAGAGGCTGCCACCGGGGAGAAGCAGCGGTCCTCCATCCAGAACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CCA 90 bp GGAACGCACAGCCAGACACACACACACACACCCTGCCACGCACAGCACGCAGGCAATATGATGGATATCTaGGGCAGGTCCTTGGAGTAC +
Preference number: 4 (lower is better)
Translates to: GTHSQTHTHTPCHAQHAGNMMDI*GRSLEY
Trigger: GTACTCCAAGGACCTGCCCCAGATATCCATCATATT...GCCTGCGTGCTGTGCGTGGCAGGGTGTGTGTGTGTGTGTCTGGCTGTGCGTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CCA 90 bp CTGGGATGGGAGATGTGGAGGAGAACTGGACAGTCTTGCTCCTCAGTACCAGGTGCAGCCTATCATGGCTaGGGTCCTGATGGGGAGAGA +
Preference number: 4 (lower is better)
Translates to: LGWEMWRRTGQSCSSVPGAAYHG*GPDGER
Trigger: TCTCTCCCCATCAGGACCCCAGCCATGATAGGCTGC...ACCTGGTACTGAGGAGCAAGACTGTCCAGTTCTCCTCCACATCTCCCATCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CCA 90 bp AGAGATGAGACACAGGAGGGGACCCTGCCAGTCCCAGATCCTGATTCTGGGATGTTCTCCAGCGGCCCCTaGTCCAAGCAGACGTCTTTT +
Preference number: 4 (lower is better)
Translates to: RDETQEGTLPVPDPDSGMFSSGP*SKQTSF
Trigger: AAAAGACGTCTGCTTGGACCAGGGGCCGCTGGAGAA...CATCCCAGAATCAGGATCTGGGACTGGCAGGGTCCCCTCCTGTGTCTCATCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CCA 90 bp GCAGCTGCTGCTGCAAGAGATGAGACACAGGAGGGGACCCTGCCAGTCCCAGATTGTGGTCCCCAGCCATaGCACGGATACAATATTGCT +
Preference number: 4 (lower is better)
Translates to: AAAAARDETQEGTLPVPDCGPQP*HGYNIA
Trigger: AGCAATATTGTATCCGTGCCATGGCTGGGGACCACA...ATCTGGGACTGGCAGGGTCCCCTCCTGTGTCTCATCTCTTGCAGCAGCAGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CCA 90 bp CTGGCAGCCTTTGCTTCAGCCCTTAGGTTCTGGATGGAGGACCGCTGCTTCTCCCAGGCAGGTGTCATCTaGGTAGAAGTAACCTCGGAG +
Preference number: 4 (lower is better)
Translates to: LAAFASALRFWMEDRCFSQAGVI*VEVTSE
Trigger: CTCCGAGGTTACTTCTACCCAGATGACACCTGCCTG...GGAGAAGCAGCGGTCCTCCATCCAGAACCTAAGGGCTGAAGCAAAGGCTGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CCA 90 bp GAGGAGAACTGGACAGTCTTGCTCCTCAGTACCAGGTCCACATCAGAGGCTGTGTGCCCAAAGCTACCCTaGTGGGAAGGGTTAGGGGCA +
Preference number: 4 (lower is better)
Translates to: EENWTVLLLSTRSTSEAVCPKLP*WEGLGA
Trigger: TGCCCCTAACCCTTCCCACCAGGGTAGCTTTGGGCA...CACAGCCTCTGATGTGGACCTGGTACTGAGGAGCAAGACTGTCCAGTTCTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CCA 90 bp GACAGTCTTGCTCCTCAGTACCAGGTCCACATCAGAGGCTGTGGAAGACAGCTGTGCCCAAAGCTACCCTaGTGGGAAGGGTTAGGGGCA +
Preference number: 4 (lower is better)
Translates to: DSLAPQYQVHIRGCGRQLCPKLP*WEGLGA
Trigger: TGCCCCTAACCCTTCCCACCAGGGTAGCTTTGGGCA...CAGCTGTCTTCCACAGCCTCTGATGTGGACCTGGTACTGAGGAGCAAGACTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CCA 90 bp GTAAGACGTCACCAAATGAGACACTGCGAATCCCACACAGGGCAAGGGGGCAGCTCAGCCCTTAGGTTCTaGATGGAGGACCGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: VRRHQMRHCESHTGQGGSSALRF*MEDRCF
Trigger: GAAGCAGCGGTCCTCCATCCAGAACCTAAGGGCTGA...GCTGCCCCCTTGCCCTGTGTGGGATTCGCAGTGTCTCATTTGGTGACGTCTTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CCA 90 bp ACGTCACCAAATGAGACACTGCGAATCCCACACAGGGCAAGGGGGCAGCTACAGAAAAGAGATGGGGACTaGGAGATGGGACAGCCTCCC +
Preference number: 4 (lower is better)
Translates to: TSPNETLRIPHRARGQLQKRDGD*EMGQPP
Trigger: GGGAGGCTGTCCCATCTCCCAGTCCCCATCTCTTTT...CTGTAGCTGCCCCCTTGCCCTGTGTGGGATTCGCAGTGTCTCATTTGGTGACGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CCA 90 bp CCTGATTCTGGGATGGGAGATGTGGAGGAGAACTGGACAGTCTTGCTCCTCAGTTACAGGGTTCAGCTCTaGGCAGGGCTTGGCCAGGGA +
Preference number: 4 (lower is better)
Translates to: PDSGMGDVEENWTVLLLSYRVQL*AGLGQG
Trigger: TCCCTGGCCAAGCCCTGCCCAGAGCTGAACCCTGTA...ACTGAGGAGCAAGACTGTCCAGTTCTCCTCCACATCTCCCATCCCAGAATCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CCA 90 bp TCAGCATCGTCACACACTCCGGAACGCACAGCCAGACACACACACACACACCCTCCACAAGGTGGGAGATaGGGTGAGGAGATGATCACC +
Preference number: 4 (lower is better)
Translates to: SASSHTPERTARHTHTHPPQGGR*GEEMIT
Trigger: GGTGATCATCTCCTCACCCCATCTCCCACCTTGTGG...AGGGTGTGTGTGTGTGTGTCTGGCTGTGCGTTCCGGAGTGTGTGACGATGCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR TCA 90 bp TCAGCATCGTCACACACTCCGGAACGCACAGCCAGACACACACACACACACCCTCGAAGAACTTCCTGTTaGCCACGAACGAGCAGCCTA +
Preference number: 4 (lower is better)
Translates to: SASSHTPERTARHTHTHPRRTSC*PRTSSL
Trigger: TAGGCTGCTCGTTCGTGGTCAACAGGAAGTTCTTCG...AGGGTGTGTGTGTGTGTGTCTGGCTGTGCGTTCCGGAGTGTGTGACGATGCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR TCA 90 bp GACAGTCTTGCTCCTCAGTACCAGGTCCACATCAGAGGCTGTGGAAGACAGCTGGCCAGTCCCAGATCCTaGTTCTGGGATGGGAGATGT +
Preference number: 4 (lower is better)
Translates to: DSLAPQYQVHIRGCGRQLASPRS*FWDGRC
Trigger: ACATCTCCCATCCCAGAATCAGGATCTGGGACTGGC...CAGCTGTCTTCCACAGCCTCTGATGTGGACCTGGTACTGAGGAGCAAGACTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR TCA 90 bp CTGGGATGGGAGATGTGGAGGAGAACTGGACAGTCTTGCTCCTCAGTACCAGGTTCGTCCCCATCCAGGTaGGTAATGAAGCAGCAAGCC +
Preference number: 4 (lower is better)
Translates to: LGWEMWRRTGQSCSSVPGSSPSR*VMKQQA
Trigger: GGCTTGCTGCTTCATTACTCACCTGGATGGGGACGA...ACCTGGTACTGAGGAGCAAGACTGTCCAGTTCTCCTCCACATCTCCCATCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR TCA 90 bp GTAAGACGTCACCAAATGAGACACTGCGAATCCCACACAGGGCAAGGGGGCAGCGATGGGGTGAGGAGATaGTCACCAGTAAGACGTCAC +
Preference number: 4 (lower is better)
Translates to: VRRHQMRHCESHTGQGGSDGVRR*SPVRRH
Trigger: GTGACGTCTTACTGGTGATCATCTCCTCACCCCATC...GCTGCCCCCTTGCCCTGTGTGGGATTCGCAGTGTCTCATTTGGTGACGTCTTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR GCA 90 bp TTGCTTCAGCCCTTAGGTTCTGGATGGAGGACCGCTGCTTCTCCCCGGTGGCAGCTCCGTATACATCCATaGCAGGATCCAGAAGACCAA +
Preference number: 4 (lower is better)
Translates to: LLQPLGSGWRTAASPRWQLRIHP*QDPEDQ
Trigger: TTGGTCTTCTGGATCCTGGCATGGATGTATACGGAG...CTGCCACCGGGGAGAAGCAGCGGTCCTCCATCCAGAACCTAAGGGCTGAAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR GCA 90 bp AGGTGTCATCTGGGTAGAAGTAACCTCGGAGGAAATAGTGCCTGGTCCTCACTGGTGCCTGGTCCTCACTaGCTCCTTTTAGGGCGGGGA +
Preference number: 4 (lower is better)
Translates to: RCHLGRSNLGGNSAWSSLVPGPH*LLLGRG
Trigger: TCCCCGCCCTAAAAGGAGGCAGTGAGGACCAGGCAC...CAGTGAGGACCAGGCACTATTTCCTCCGAGGTTACTTCTACCCAGATGACACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CCA 90 bp CTGGCAGCCTTTGCTTCAGCCCTTAGGTTCTGGATGGAGGACCGCTGCTTCTCCGCTCCTTACACTTGGTaGGACGATAATCCGGAATGG +
Preference number: 4 (lower is better)
Translates to: LAAFASALRFWMEDRCFSAPYTW*DDNPEW
Trigger: CCATTCCGGATTATCGTCCCACCAAGTGTAAGGAGC...GGAGAAGCAGCGGTCCTCCATCCAGAACCTAAGGGCTGAAGCAAAGGCTGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CCA 90 bp CTGGCAGCCTTTGCTTCAGCCCTTAGGTTCTGGATGGAGGACCGCTGCTTCTCCCCACATCAGAGGCTGTaGAAGACAGCTGTCAGTTTC +
Preference number: 4 (lower is better)
Translates to: LAAFASALRFWMEDRCFSPHQRL*KTAVSF
Trigger: GAAACTGACAGCTGTCTTCCACAGCCTCTGATGTGG...GGAGAAGCAGCGGTCCTCCATCCAGAACCTAAGGGCTGAAGCAAAGGCTGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CCA 90 bp CTGGGATGGGAGATGTGGAGGAGAACTGGACAGTCTTGCTCCTCAGTACCAGGTCACCGTGTTGATGGCTaGAGTTCAGCAGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: LGWEMWRRTGQSCSSVPGHRVDG*SSAAAA
Trigger: AGCAGCAGCTGCTGAACTCCAGCCATCAACACGGTG...ACCTGGTACTGAGGAGCAAGACTGTCCAGTTCTCCTCCACATCTCCCATCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CCA 90 bp GAGAGGAAACGACTGCCTTCTCCTCTGCCAGCCAGCAGAGCGTGGGGTGAAATGGGAGGAAATAGTGCCTaGTCCTCACTGCCTCCTTTT +
Preference number: 4 (lower is better)
Translates to: ERKRLPSPLPASRAWGEMGGNSA*SSLPPF
Trigger: AAAAGGAGGCAGTGAGGACCAGGCACTATTTCCTCC...CATTTCACCCCACGCTCTGCTGGCTGGCAGAGGAGAAGGCAGTCGTTTCCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CCA 90 bp CTGGCAGCCTTTGCTTCAGCCCTTAGGTTCTGGATGGAGGACCGCTGCTTCTCCGGAGGAAATAGTGCCTaGTCCTCACTGCCTCCTTTT +
Preference number: 4 (lower is better)
Translates to: LAAFASALRFWMEDRCFSGGNSA*SSLPPF
Trigger: AAAAGGAGGCAGTGAGGACCAGGCACTATTTCCTCC...GGAGAAGCAGCGGTCCTCCATCCAGAACCTAAGGGCTGAAGCAAAGGCTGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CCA 90 bp CTGGGATGGGAGATGTGGAGGAGAACTGGACAGTCTTGCTCCTCAGTACCAGGTCACAGGCAGGAGAGCTaGCCCAAGCACACTGATAAG +
Preference number: 4 (lower is better)
Translates to: LGWEMWRRTGQSCSSVPGHRQES*PKHTDK
Trigger: CTTATCAGTGTGCTTGGGCCAGCTCTCCTGCCTGTG...ACCTGGTACTGAGGAGCAAGACTGTCCAGTTCTCCTCCACATCTCCCATCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CCA 90 bp CCTGATTCTGGGATGGGAGATGTGGAGGAGAACTGGACAGTCTTGCTCCTCAGTCCCTTAGGTTCTGGATaGAGGACCGCTGCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: PDSGMGDVEENWTVLLLSPLGSG*RTAASP
Trigger: GGGAGAAGCAGCGGTCCTCCATCCAGAACCTAAGGG...ACTGAGGAGCAAGACTGTCCAGTTCTCCTCCACATCTCCCATCCCAGAATCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CCA 90 bp CTGGGATGGGAGATGTGGAGGAGAACTGGACAGTCTTGCTCCTCAGTACCAGGTTGGCCAGGGACAGTGTaGGGAAAAAGAGATGGGGAC +
Preference number: 4 (lower is better)
Translates to: LGWEMWRRTGQSCSSVPGWPGTV*GKRDGD
Trigger: GTCCCCATCTCTTTTTCCCCACACTGTCCCTGGCCA...ACCTGGTACTGAGGAGCAAGACTGTCCAGTTCTCCTCCACATCTCCCATCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
3UTR CAA 72 bp TCTGGGATGGGAGATGTGGAGGAGAACTGGACAGTCTaGCTCCTCAGTACCAGGTCCACATCAGAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: SGMGDVEENWTV*LLSTRSTSEAV
Trigger: CACAGCCTCTGATGTGGACCTGGTACTGAGGAGCAAGACTGTCCAGTTCTCCTCCACATCTCCCATCCCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
3UTR CAA 72 bp GTGAGCCAAAAGCATCTTCAAGGGTCCTGGCAGCCTTaGCTTCAGCCCTTAGGTTCTGGATGGAGGACCGCT +
Preference number: 4 (lower is better)
Translates to: VSQKHLQGSWQP*LQPLGSGWRTA
Trigger: AGCGGTCCTCCATCCAGAACCTAAGGGCTGAAGCAAAGGCTGCCAGGACCCTTGAAGATGCTTTTGGCTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR TCA 90 bp CTGGCAGCCTTTGCTTCAGCCCTTAGGTTCTGGATGGAGGACCGCTGCTTCTCCTGGGGTGAAATGAGGTaGGCCAAAAGCATCTTCAAG +
Preference number: 4 (lower is better)
Translates to: LAAFASALRFWMEDRCFSWGEMR*AKSIFK
Trigger: CTTGAAGATGCTTTTGGCTCACCTCATTTCACCCCA...GGAGAAGCAGCGGTCCTCCATCCAGAACCTAAGGGCTGAAGCAAAGGCTGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR TCA 90 bp CCTGATTCTGGGATGGGAGATGTGGAGGAGAACTGGACAGTCTTGCTCCTCAGTCAGCAGAGCGTGGGGTaGAATGAGGTGAGCCAAAAG +
Preference number: 4 (lower is better)
Translates to: PDSGMGDVEENWTVLLLSQQSVG*NEVSQK
Trigger: CTTTTGGCTCACCTCATTTCACCCCACGCTCTGCTG...ACTGAGGAGCAAGACTGTCCAGTTCTCCTCCACATCTCCCATCCCAGAATCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR GCA 90 bp ACGTCACCAAATGAGACACTGCGAATCCCACACAGGGCAAGGGGGCAGCTACAGGAGTTCTCGTACCGCTaGACCTCAAAGTTGTCCTGT +
Preference number: 4 (lower is better)
Translates to: TSPNETLRIPHRARGQLQEFSYR*TSKLSC
Trigger: ACAGGACAACTTTGAGGTGCAGCGGTACGAGAACTC...CTGTAGCTGCCCCCTTGCCCTGTGTGGGATTCGCAGTGTCTCATTTGGTGACGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR GCA 90 bp TCAGCATCGTCACACACTCCGGAACGCACAGCCAGACACACACACACACACCCTGCACGGATACAATATTaGTGTGTGGTTCTCCAGCGG +
Preference number: 4 (lower is better)
Translates to: SASSHTPERTARHTHTHPARIQY*CVVLQR
Trigger: CCGCTGGAGAACCACACAGCAATATTGTATCCGTGC...AGGGTGTGTGTGTGTGTGTCTGGCTGTGCGTTCCGGAGTGTGTGACGATGCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR GCA 90 bp AGGTGTCATCTGGGTAGAAGTAACCTCGGAGGAAATAGTGCCTGGTCCTCACTGGGGGCTTTTCCAGGGTaGAGGAAACTTGTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: RCHLGRSNLGGNSAWSSLGAFPG*RKLVGS
Trigger: GCTGCCCACAAGTTTCCTGCACCCTGGAAAAGCCCC...CAGTGAGGACCAGGCACTATTTCCTCCGAGGTTACTTCTACCCAGATGACACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR GCA 90 bp TCAGCATCGTCACACACTCCGGAACGCACAGCCAGACACACACACACACACCCTAGAAAAGTCCAGAGCTaGAGTGCCCAAAGCTACCCT +
Preference number: 4 (lower is better)
Translates to: SASSHTPERTARHTHTHPRKVQS*SAQSYP
Trigger: AGGGTAGCTTTGGGCACTGCAGCTCTGGACTTTTCT...AGGGTGTGTGTGTGTGTGTCTGGCTGTGCGTTCCGGAGTGTGTGACGATGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CCA 90 bp GAGGAGAACTGGACAGTCTTGCTCCTCAGTACCAGGTCCACATCAGAGGCTGTGTTCTGCACCAGCAAGTaGTTCGCCTCTGGACCTCTA +
Preference number: 4 (lower is better)
Translates to: EENWTVLLLSTRSTSEAVFCTSK*FASGPL
Trigger: TAGAGGTCCAGAGGCGAACCACTTGCTGGTGCAGAA...CACAGCCTCTGATGTGGACCTGGTACTGAGGAGCAAGACTGTCCAGTTCTCCTC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333538.10
CDS-3UTR CCA 90 bp TTGCTTCAGCCCTTAGGTTCTGGATGGAGGACCGCTGCTTCTCCCCGGTGGCAGGAAGAGCATTCCTCTTaGTGTAGAAGCCAATGTTGC +
Preference number: 4 (lower is better)
Translates to: LLQPLGSGWRTAASPRWQEEHSS*CRSQCC
Trigger: GCAACATTGGCTTCTACACCAAGAGGAATGCTCTTC...CTGCCACCGGGGAGAAGCAGCGGTCCTCCATCCAGAACCTAAGGGCTGAAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CCA 90 bp GAGGAGAACTGGACAGTCTTGCTCCTCAGTACCAGGTCCACATCAGAGGCTGTGTACAATATTGCTGTGTaGTTCTCCAGCGGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: EENWTVLLLSTRSTSEAVYNIAV*FSSGPW
Trigger: CCAGGGGCCGCTGGAGAACCACACAGCAATATTGTA...CACAGCCTCTGATGTGGACCTGGTACTGAGGAGCAAGACTGTCCAGTTCTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CCA 90 bp CTGGGATGGGAGATGTGGAGGAGAACTGGACAGTCTTGCTCCTCAGTACCAGGTTACAATATTGCTGTGTaGTTCTCCAGCGGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: LGWEMWRRTGQSCSSVPGYNIAV*FSSGPW
Trigger: CCAGGGGCCGCTGGAGAACCACACAGCAATATTGTA...ACCTGGTACTGAGGAGCAAGACTGTCCAGTTCTCCTCCACATCTCCCATCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CCA 90 bp CCTGATTCTGGGATGGGAGATGTGGAGGAGAACTGGACAGTCTTGCTCCTCAGTGGTGCAGGAAACTTGTaGGCAGCTGAATGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: PDSGMGDVEENWTVLLLSGAGNL*AAECLR
Trigger: CCTCAGGCATTCAGCTGCCCACAAGTTTCCTGCACC...ACTGAGGAGCAAGACTGTCCAGTTCTCCTCCACATCTCCCATCCCAGAATCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CCA 90 bp GTAAGACGTCACCAAATGAGACACTGCGAATCCCACACAGGGCAAGGGGGCAGCCCACATCAGAGGCTGTaGAAGACAGCTGTCAGTTTC +
Preference number: 4 (lower is better)
Translates to: VRRHQMRHCESHTGQGGSPHQRL*KTAVSF
Trigger: GAAACTGACAGCTGTCTTCCACAGCCTCTGATGTGG...GCTGCCCCCTTGCCCTGTGTGGGATTCGCAGTGTCTCATTTGGTGACGTCTTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CCA 90 bp AGAGATGAGACACAGGAGGGGACCCTGCCAGTCCCAGATCCTGATTCTGGGATGGATGTGGAGGAGAACTaGACAGTCTTGCTCCTCAGT +
Preference number: 4 (lower is better)
Translates to: RDETQEGTLPVPDPDSGMDVEEN*TVLLLS
Trigger: ACTGAGGAGCAAGACTGTCCAGTTCTCCTCCACATC...CATCCCAGAATCAGGATCTGGGACTGGCAGGGTCCCCTCCTGTGTCTCATCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CCA 90 bp GTCATCTGGGTAGAAGTAACCTCGGAGGAAATAGTGCCTGGTCCTCACTGCCTCCACAGGCAGGAGAGCTaGCCCAAGCACACTGATAAG +
Preference number: 4 (lower is better)
Translates to: VIWVEVTSEEIVPGPHCLHRQES*PKHTDK
Trigger: CTTATCAGTGTGCTTGGGCCAGCTCTCCTGCCTGTG...GAGGCAGTGAGGACCAGGCACTATTTCCTCCGAGGTTACTTCTACCCAGATGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CCA 90 bp GTCATCTGGGTAGAAGTAACCTCGGAGGAAATAGTGCCTGGTCCTCACTGCCTCAAAAGAGATGGGGACTaGGAGATGGGACAGCCTCCC +
Preference number: 4 (lower is better)
Translates to: VIWVEVTSEEIVPGPHCLKRDGD*EMGQPP
Trigger: GGGAGGCTGTCCCATCTCCCAGTCCCCATCTCTTTT...GAGGCAGTGAGGACCAGGCACTATTTCCTCCGAGGTTACTTCTACCCAGATGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CCA 90 bp GTCATCTGGGTAGAAGTAACCTCGGAGGAAATAGTGCCTGGTCCTCACTGCCTCCCACAAGGTGGGAGATaGGGTGAGGAGATGATCACC +
Preference number: 4 (lower is better)
Translates to: VIWVEVTSEEIVPGPHCLPQGGR*GEEMIT
Trigger: GGTGATCATCTCCTCACCCCATCTCCCACCTTGTGG...GAGGCAGTGAGGACCAGGCACTATTTCCTCCGAGGTTACTTCTACCCAGATGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR TCA 90 bp TCAGCATCGTCACACACTCCGGAACGCACAGCCAGACACACACACACACACCCTACACCAACAGCACTTTaGCTCTTCTCAGTGAAGCCA +
Preference number: 4 (lower is better)
Translates to: SASSHTPERTARHTHTHPTPTAL*LFSVKP
Trigger: TGGCTTCACTGAGAAGAGTCAAAGTGCTGTTGGTGT...AGGGTGTGTGTGTGTGTGTCTGGCTGTGCGTTCCGGAGTGTGTGACGATGCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333538.10
CDS-3UTR TCA 90 bp GTCATCTGGGTAGAAGTAACCTCGGAGGAAATAGTGCCTGGTCCTCACTGCCTCGGTCCTTGGAGTACTTaGGCTCCTTACACTTGGTGG +
Preference number: 4 (lower is better)
Translates to: VIWVEVTSEEIVPGPHCLGPWST*APYTWW
Trigger: CCACCAAGTGTAAGGAGCTCAAGTACTCCAAGGACC...GAGGCAGTGAGGACCAGGCACTATTTCCTCCGAGGTTACTTCTACCCAGATGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR TCA 90 bp GACAGTCTTGCTCCTCAGTACCAGGTCCACATCAGAGGCTGTGGAAGACAGCTGTGGCTCCATTCTGGATaGAGTTCCAGCGCTTGTACA +
Preference number: 4 (lower is better)
Translates to: DSLAPQYQVHIRGCGRQLWLHSG*SSSACT
Trigger: TGTACAAGCGCTGGAACTTCATCCAGAATGGAGCCA...CAGCTGTCTTCCACAGCCTCTGATGTGGACCTGGTACTGAGGAGCAAGACTGTC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR TCA 90 bp GTCATCTGGGTAGAAGTAACCTCGGAGGAAATAGTGCCTGGTCCTCACTGCCTCGAGCGTGGGGTGAAATaGGGTGAGCCAAAAGCATCT +
Preference number: 4 (lower is better)
Translates to: VIWVEVTSEEIVPGPHCLERGVK*GEPKAS
Trigger: AGATGCTTTTGGCTCACCTCATTTCACCCCACGCTC...GAGGCAGTGAGGACCAGGCACTATTTCCTCCGAGGTTACTTCTACCCAGATGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR TCA 90 bp AGGTGTCATCTGGGTAGAAGTAACCTCGGAGGAAATAGTGCCTGGTCCTCACTGTCGTCCCCATCCAGGTaGGTAATGAAGCAGCAAGCC +
Preference number: 4 (lower is better)
Translates to: RCHLGRSNLGGNSAWSSLSSPSR*VMKQQA
Trigger: GGCTTGCTGCTTCATTACTCACCTGGATGGGGACGA...CAGTGAGGACCAGGCACTATTTCCTCCGAGGTTACTTCTACCCAGATGACACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR GCA 90 bp CTGGGATGGGAGATGTGGAGGAGAACTGGACAGTCTTGCTCCTCAGTACCAGGTAGAACTGGACAGTCTTaGTCCTCAGTACCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: LGWEMWRRTGQSCSSVPGRTGQS*SSVPGP
Trigger: TGGACCTGGTACTGAGGAGCAAGACTGTCCAGTTCT...ACCTGGTACTGAGGAGCAAGACTGTCCAGTTCTCCTCCACATCTCCCATCCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR GCA 90 bp TCAGCATCGTCACACACTCCGGAACGCACAGCCAGACACACACACACACACCCTTGGCTGAGATCCTACTaGAGGCTTAGCCTATTTCTG +
Preference number: 4 (lower is better)
Translates to: SASSHTPERTARHTHTHPWLRSY*RLSLFL
Trigger: CAGAAATAGGCTAAGCCTGCAGTAGGATCTCAGCCA...AGGGTGTGTGTGTGTGTGTCTGGCTGTGCGTTCCGGAGTGTGTGACGATGCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR GCA 90 bp TCAGCATCGTCACACACTCCGGAACGCACAGCCAGACACACACACACACACCCTGCACACACACACTTGTaGATGCACACGCGTTCATAT +
Preference number: 4 (lower is better)
Translates to: SASSHTPERTARHTHTHPAHTHL*MHTRSY
Trigger: ATATGAACGCGTGTGCATGCACAAGTGTGTGTGTGC...AGGGTGTGTGTGTGTGTGTCTGGCTGTGCGTTCCGGAGTGTGTGACGATGCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR GCA 90 bp GACAGTCTTGCTCCTCAGTACCAGGTCCACATCAGAGGCTGTGGAAGACAGCTGCACCAAATGAGACACTaGGAATCCCACACAGGGCAA +
Preference number: 4 (lower is better)
Translates to: DSLAPQYQVHIRGCGRQLHQMRH*ESHTGQ
Trigger: TTGCCCTGTGTGGGATTCGCAGTGTCTCATTTGGTG...CAGCTGTCTTCCACAGCCTCTGATGTGGACCTGGTACTGAGGAGCAAGACTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CCA 90 bp GCAGCTGCTGCTGCAAGAGATGAGACACAGGAGGGGACCCTGCCAGTCCCAGATGACGATAATCCGGAATaGAACGGTCCAGTGAAATTT +
Preference number: 4 (lower is better)
Translates to: AAAAARDETQEGTLPVPDDDNPE*NGPVKF
Trigger: AAATTTCACTGGACCGTTCCATTCCGGATTATCGTC...ATCTGGGACTGGCAGGGTCCCCTCCTGTGTCTCATCTCTTGCAGCAGCAGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CCA 90 bp GTCATCTGGGTAGAAGTAACCTCGGAGGAAATAGTGCCTGGTCCTCACTGCCTCGTCCCACCAGTCTTTTaGGGGGCTGATGTACATGCA +
Preference number: 4 (lower is better)
Translates to: VIWVEVTSEEIVPGPHCLVPPVF*GADVHA
Trigger: TGCATGTACATCAGCCCCCCAAAAGACTGGTGGGAC...GAGGCAGTGAGGACCAGGCACTATTTCCTCCGAGGTTACTTCTACCCAGATGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CCA 90 bp TCAGCATCGTCACACACTCCGGAACGCACAGCCAGACACACACACACACACCCTATGATGGCTCCATTCTaGATGAAGTTCCAGCGCTTG +
Preference number: 4 (lower is better)
Translates to: SASSHTPERTARHTHTHPMMAPF*MKFQRL
Trigger: CAAGCGCTGGAACTTCATCCAGAATGGAGCCATCAT...AGGGTGTGTGTGTGTGTGTCTGGCTGTGCGTTCCGGAGTGTGTGACGATGCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CCA 90 bp AGAGATGAGACACAGGAGGGGACCCTGCCAGTCCCAGATCCTGATTCTGGGATGATCCTGATTCTGGGATaGGAGATGTGGAGGAGAACT +
Preference number: 4 (lower is better)
Translates to: RDETQEGTLPVPDPDSGMILILG*EMWRRT
Trigger: AGTTCTCCTCCACATCTCCCATCCCAGAATCAGGAT...CATCCCAGAATCAGGATCTGGGACTGGCAGGGTCCCCTCCTGTGTCTCATCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
3UTR CAA 72 bp CACCCTGCCACGCACAGCACGCAGGCACACACACACTaGTGCATGCACACGCGTTCATATATTAACTCTGAT +
Preference number: 4 (lower is better)
Translates to: HPATHSTQAHTH*CMHTRSYINSD
Trigger: ATCAGAGTTAATATATGAACGCGTGTGCATGCACAAGTGTGTGTGTGCCTGCGTGCTGTGCGTGGCAGGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR TCA 90 bp AGAGATGAGACACAGGAGGGGACCCTGCCAGTCCCAGATCCTGATTCTGGGATGCACCATAACCTTCAATaGGCCCAAGGGATTTGGATA +
Preference number: 4 (lower is better)
Translates to: RDETQEGTLPVPDPDSGMHHNLQ*AQGIWI
Trigger: TATCCAAATCCCTTGGGCTCATTGAAGGTTATGGTG...CATCCCAGAATCAGGATCTGGGACTGGCAGGGTCCCCTCCTGTGTCTCATCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR TCA 90 bp CTGGGATGGGAGATGTGGAGGAGAACTGGACAGTCTTGCTCCTCAGTACCAGGTTGGGGTGAAATGAGGTaGGCCAAAAGCATCTTCAAG +
Preference number: 4 (lower is better)
Translates to: LGWEMWRRTGQSCSSVPGWGEMR*AKSIFK
Trigger: CTTGAAGATGCTTTTGGCTCACCTCATTTCACCCCA...ACCTGGTACTGAGGAGCAAGACTGTCCAGTTCTCCTCCACATCTCCCATCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR GCA 90 bp AGGTGTCATCTGGGTAGAAGTAACCTCGGAGGAAATAGTGCCTGGTCCTCACTGGATAAGCCATTCAGCTaGCGGTACACGATGTCCTCC +
Preference number: 4 (lower is better)
Translates to: RCHLGRSNLGGNSAWSSLDKPFS*RYTMSS
Trigger: GGAGGACATCGTGTACCGGCAGCTGAATGGCTTATC...CAGTGAGGACCAGGCACTATTTCCTCCGAGGTTACTTCTACCCAGATGACACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333538.10
CDS-3UTR GCA 90 bp CTGGCAGCCTTTGCTTCAGCCCTTAGGTTCTGGATGGAGGACCGCTGCTTCTCCACTCTGATTTATATGTaGACCCTAACCAGAGGGCAA +
Preference number: 4 (lower is better)
Translates to: LAAFASALRFWMEDRCFSTLIYM*TLTRGQ
Trigger: TTGCCCTCTGGTTAGGGTGCACATATAAATCAGAGT...GGAGAAGCAGCGGTCCTCCATCCAGAACCTAAGGGCTGAAGCAAAGGCTGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR GCA 90 bp CCTGATTCTGGGATGGGAGATGTGGAGGAGAACTGGACAGTCTTGCTCCTCAGTCACCAAATGAGACACTaGGAATCCCACACAGGGCAA +
Preference number: 4 (lower is better)
Translates to: PDSGMGDVEENWTVLLLSHQMRH*ESHTGQ
Trigger: TTGCCCTGTGTGGGATTCGCAGTGTCTCATTTGGTG...ACTGAGGAGCAAGACTGTCCAGTTCTCCTCCACATCTCCCATCCCAGAATCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CCA 90 bp AGGTGTCATCTGGGTAGAAGTAACCTCGGAGGAAATAGTGCCTGGTCCTCACTGACGGAATCGCTCACATaGAAGTCCTCGCTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: RCHLGRSNLGGNSAWSSLTESLT*KSSLCR
Trigger: TCTGCAGAGCGAGGACTTCCATGTGAGCGATTCCGT...CAGTGAGGACCAGGCACTATTTCCTCCGAGGTTACTTCTACCCAGATGACACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333538.10
CDS-3UTR CCA 90 bp AGGTGTCATCTGGGTAGAAGTAACCTCGGAGGAAATAGTGCCTGGTCCTCACTGGTCCCACCAGTCTTTTaGGGGGCTGATGTACATGCA +
Preference number: 4 (lower is better)
Translates to: RCHLGRSNLGGNSAWSSLVPPVF*GADVHA
Trigger: TGCATGTACATCAGCCCCCCAAAAGACTGGTGGGAC...CAGTGAGGACCAGGCACTATTTCCTCCGAGGTTACTTCTACCCAGATGACACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR TCA 90 bp GAGGAGAACTGGACAGTCTTGCTCCTCAGTACCAGGTCCACATCAGAGGCTGTGCACCATAACCTTCAATaGGCCCAAGGGATTTGGATA +
Preference number: 4 (lower is better)
Translates to: EENWTVLLLSTRSTSEAVHHNLQ*AQGIWI
Trigger: TATCCAAATCCCTTGGGCTCATTGAAGGTTATGGTG...CACAGCCTCTGATGTGGACCTGGTACTGAGGAGCAAGACTGTCCAGTTCTCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR GCA 90 bp CCTGATTCTGGGATGGGAGATGTGGAGGAGAACTGGACAGTCTTGCTCCTCAGTCAAGCAGACGTCTTTTaGCTTGTTGTTGCGAAGCTC +
Preference number: 4 (lower is better)
Translates to: PDSGMGDVEENWTVLLLSQADVF*LVVAKL
Trigger: GAGCTTCGCAACAACAAGGCAAAAGACGTCTGCTTG...ACTGAGGAGCAAGACTGTCCAGTTCTCCTCCACATCTCCCATCCCAGAATCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CCA 90 bp ACGTCACCAAATGAGACACTGCGAATCCCACACAGGGCAAGGGGGCAGCTACAGGACGATAATCCGGAATaGAACGGTCCAGTGAAATTT +
Preference number: 4 (lower is better)
Translates to: TSPNETLRIPHRARGQLQDDNPE*NGPVKF
Trigger: AAATTTCACTGGACCGTTCCATTCCGGATTATCGTC...CTGTAGCTGCCCCCTTGCCCTGTGTGGGATTCGCAGTGTCTCATTTGGTGACGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CCA 90 bp GACAGTCTTGCTCCTCAGTACCAGGTCCACATCAGAGGCTGTGGAAGACAGCTGGAAGAGCATTCCTCTTaGTGTAGAAGCCAATGTTGC +
Preference number: 4 (lower is better)
Translates to: DSLAPQYQVHIRGCGRQLEEHSS*CRSQCC
Trigger: GCAACATTGGCTTCTACACCAAGAGGAATGCTCTTC...CAGCTGTCTTCCACAGCCTCTGATGTGGACCTGGTACTGAGGAGCAAGACTGTC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CCA 90 bp AGGTGTCATCTGGGTAGAAGTAACCTCGGAGGAAATAGTGCCTGGTCCTCACTGTGTGGTCCCCAGCCATaGCACGGATACAATATTGCT +
Preference number: 4 (lower is better)
Translates to: RCHLGRSNLGGNSAWSSLCGPQP*HGYNIA
Trigger: AGCAATATTGTATCCGTGCCATGGCTGGGGACCACA...CAGTGAGGACCAGGCACTATTTCCTCCGAGGTTACTTCTACCCAGATGACACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CCA 90 bp CCTGATTCTGGGATGGGAGATGTGGAGGAGAACTGGACAGTCTTGCTCCTCAGTATGATGGCTCCATTCTaGATGAAGTTCCAGCGCTTG +
Preference number: 4 (lower is better)
Translates to: PDSGMGDVEENWTVLLLSMMAPF*MKFQRL
Trigger: CAAGCGCTGGAACTTCATCCAGAATGGAGCCATCAT...ACTGAGGAGCAAGACTGTCCAGTTCTCCTCCACATCTCCCATCCCAGAATCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR TCA 90 bp GTAAGACGTCACCAAATGAGACACTGCGAATCCCACACAGGGCAAGGGGGCAGCCACAGAGCCATACCTTaGTTCCCAGTTCAATATTTT +
Preference number: 4 (lower is better)
Translates to: VRRHQMRHCESHTGQGGSHRAIP*FPVQYF
Trigger: AAAATATTGAACTGGGAATCAAGGTATGGCTCTGTG...GCTGCCCCCTTGCCCTGTGTGGGATTCGCAGTGTCTCATTTGGTGACGTCTTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR GCA 90 bp AGGTGTCATCTGGGTAGAAGTAACCTCGGAGGAAATAGTGCCTGGTCCTCACTGCAAGCAGACGTCTTTTaGCTTGTTGTTGCGAAGCTC +
Preference number: 4 (lower is better)
Translates to: RCHLGRSNLGGNSAWSSLQADVF*LVVAKL
Trigger: GAGCTTCGCAACAACAAGGCAAAAGACGTCTGCTTG...CAGTGAGGACCAGGCACTATTTCCTCCGAGGTTACTTCTACCCAGATGACACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR GCA 90 bp GACAGTCTTGCTCCTCAGTACCAGGTCCACATCAGAGGCTGTGGAAGACAGCTGACTCTGATTTATATGTaGACCCTAACCAGAGGGCAA +
Preference number: 4 (lower is better)
Translates to: DSLAPQYQVHIRGCGRQLTLIYM*TLTRGQ
Trigger: TTGCCCTCTGGTTAGGGTGCACATATAAATCAGAGT...CAGCTGTCTTCCACAGCCTCTGATGTGGACCTGGTACTGAGGAGCAAGACTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CCA 90 bp CTGGCAGCCTTTGCTTCAGCCCTTAGGTTCTGGATGGAGGACCGCTGCTTCTCCTGGTCCAGGTACCACTaGAAATTCTTACACTTTAAA +
Preference number: 4 (lower is better)
Translates to: LAAFASALRFWMEDRCFSWSRYH*KFLHFK
Trigger: TTTAAAGTGTAAGAATTTCCAGTGGTACCTGGACCA...GGAGAAGCAGCGGTCCTCCATCCAGAACCTAAGGGCTGAAGCAAAGGCTGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR TCA 90 bp CTGGGATGGGAGATGTGGAGGAGAACTGGACAGTCTTGCTCCTCAGTACCAGGTCACAGAGCCATACCTTaGTTCCCAGTTCAATATTTT +
Preference number: 4 (lower is better)
Translates to: LGWEMWRRTGQSCSSVPGHRAIP*FPVQYF
Trigger: AAAATATTGAACTGGGAATCAAGGTATGGCTCTGTG...ACCTGGTACTGAGGAGCAAGACTGTCCAGTTCTCCTCCACATCTCCCATCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR GCA 90 bp GAGAGGAAACGACTGCCTTCTCCTCTGCCAGCCAGCAGAGCGTGGGGTGAAATGTGTAGAAGCCAATGTTaGTATTATATGGCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: ERKRLPSPLPASRAWGEMCRSQC*YYMASS
Trigger: AGAAGAAGCCATATAATAGCAACATTGGCTTCTACA...CATTTCACCCCACGCTCTGCTGGCTGGCAGAGGAGAAGGCAGTCGTTTCCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CCA 90 bp GAGAGGAAACGACTGCCTTCTCCTCTGCCAGCCAGCAGAGCGTGGGGTGAAATGAATGTTGCTATTATATaGCTTCTTCTTCCGCTCAAT +
Preference number: 4 (lower is better)
Translates to: ERKRLPSPLPASRAWGEMNVAII*LLLPLN
Trigger: ATTGAGCGGAAGAAGAAGCCATATAATAGCAACATT...CATTTCACCCCACGCTCTGCTGGCTGGCAGAGGAGAAGGCAGTCGTTTCCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CCA 90 bp AGAGATGAGACACAGGAGGGGACCCTGCCAGTCCCAGATCCTGATTCTGGGATGTGGTCCAGGTACCACTaGAAATTCTTACACTTTAAA +
Preference number: 4 (lower is better)
Translates to: RDETQEGTLPVPDPDSGMWSRYH*KFLHFK
Trigger: TTTAAAGTGTAAGAATTTCCAGTGGTACCTGGACCA...CATCCCAGAATCAGGATCTGGGACTGGCAGGGTCCCCTCCTGTGTCTCATCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR GCA 90 bp ACGTCACCAAATGAGACACTGCGAATCCCACACAGGGCAAGGGGGCAGCTACAGTGTAGAAGCCAATGTTaGTATTATATGGCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: TSPNETLRIPHRARGQLQCRSQC*YYMASS
Trigger: AGAAGAAGCCATATAATAGCAACATTGGCTTCTACA...CTGTAGCTGCCCCCTTGCCCTGTGTGGGATTCGCAGTGTCTCATTTGGTGACGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CCA 90 bp ACGTCACCAAATGAGACACTGCGAATCCCACACAGGGCAAGGGGGCAGCTACAGAATGTTGCTATTATATaGCTTCTTCTTCCGCTCAAT +
Preference number: 4 (lower is better)
Translates to: TSPNETLRIPHRARGQLQNVAII*LLLPLN
Trigger: ATTGAGCGGAAGAAGAAGCCATATAATAGCAACATT...CTGTAGCTGCCCCCTTGCCCTGTGTGGGATTCGCAGTGTCTCATTTGGTGACGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS CCA 90 bp CTGTGCGCGCTGAGGTTGGCCACCTCGGCGCGCGGCCGGATCTCGTaGAAGGCGTCTCCGCTGCGCACCGCGATGGGCCGGCACTTGGCC +
Preference number: 5 (lower is better)
Translates to: LCALRLATSARGRIS*KASPLRTAMGRHLA
Trigger: GGCCAAGTGCCGGCCCATCGCGGTGCGCAGCGGAGACGCCTTCCACGAGATCCGGCCGCGCGCCGAGGTGGCCAACCTCAGCGCGCACAG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333538.10
CDS TCA 90 bp GGCGCTTCAGGACCGCATCCTGGATGGGGCTGGCGCTGTGCGCGCTaGGGTTGGCCACCTCGGCGCGCGGCCGGATCTCGTGGAAGGCGT +
Preference number: 5 (lower is better)
Translates to: GASGPHPGWGWRCAR*GWPPRRAAGSRGRR
Trigger: ACGCCTTCCACGAGATCCGGCCGCGCGCCGAGGTGGCCAACCTCAGCGCGCACAGCGCCAGCCCCATCCAGGATGCGGTCCTGAAGCGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333538.10
CDS GCA 90 bp TGGCCACCTCGGCGCGCGGCCGGATCTCGTGGAAGGCGTCTCCGCTaGGCACCGCGATGGGCCGGCACTTGGCCAGGAAGAGCACGAAGC +
Preference number: 5 (lower is better)
Translates to: WPPRRAAGSRGRRLR*APRWAGTWPGRARS
Trigger: GCTTCGTGCTCTTCCTGGCCAAGTGCCGGCCCATCGCGGTGCGCAGCGGAGACGCCTTCCACGAGATCCGGCCGCGCGCCGAGGTGGCCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333538.10
CDS GCA 90 bp AGCGACAGGCGCTTCAGGACCGCATCCTGGATGGGGCTGGCGCTGTaGGCGCTGAGGTTGGCCACCTCGGCGCGCGGCCGGATCTCGTGG +
Preference number: 5 (lower is better)
Translates to: SDRRFRTASWMGLAL*ALRLATSARGRISW
Trigger: CCACGAGATCCGGCCGCGCGCCGAGGTGGCCAACCTCAGCGCGCACAGCGCCAGCCCCATCCAGGATGCGGTCCTGAAGCGCCTGTCGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333538.10
CDS CCA 90 bp CGCGCGGCCGGATCTCGTGGAAGGCGTCTCCGCTGCGCACCGCGATaGGCCGGCACTTGGCCAGGAAGAGCACGAAGCCGGCTACCGCGA +
Preference number: 5 (lower is better)
Translates to: RAAGSRGRRLRCAPR*AGTWPGRARSRLPR
Trigger: TCGCGGTAGCCGGCTTCGTGCTCTTCCTGGCCAAGTGCCGGCCCATCGCGGTGCGCAGCGGAGACGCCTTCCACGAGATCCGGCCGCGCG
72% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333538.10
CDS GCA 90 bp GACGGCCGGCAGGGATCCAAGCCCCTGCTCGTCCCACCTCAAGGATaGTCGGGCGGCGGAGACGGCTGGGAGGTCGGATTGGTGGTGGGG +
Preference number: 5 (lower is better)
Translates to: DGRQGSKPLLVPPQG*SGGGDGWEVGLVVG
Trigger: CCCCACCACCAATCCGACCTCCCAGCCGTCTCCGCCGCCCGAGCATCCTTGAGGTGGGACGAGCAGGGGCTTGGATCCCTGCCGGCCGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333538.10
CDS GCA 90 bp CGTGCAAGCCTCACACACCAGACGGCCGGCAGGGATCCAAGCCCCTaGTCGTCCCACCTCAAGGATGCTCGGGCGGCGGAGACGGCTGGG +
Preference number: 5 (lower is better)
Translates to: RASLTHQTAGRDPSP*SSHLKDARAAETAG
Trigger: CCCAGCCGTCTCCGCCGCCCGAGCATCCTTGAGGTGGGACGAGCAGGGGCTTGGATCCCTGCCGGCCGTCTGGTGTGTGAGGCTTGCACG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333538.10
CDS CCA 90 bp TACACGATGTCCTCCAGCAGCGACAGGCGCTTCAGGACCGCATCCTaGATGGGGCTGGCGCTGTGCGCGCTGAGGTTGGCCACCTCGGCG +
Preference number: 5 (lower is better)
Translates to: YTMSSSSDRRFRTAS*MGLALCALRLATSA
Trigger: CGCCGAGGTGGCCAACCTCAGCGCGCACAGCGCCAGCCCCATCCAGGATGCGGTCCTGAAGCGCCTGTCGCTGCTGGAGGACATCGTGTA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333538.10
CDS GCA 90 bp CTCACATGGAAGTCCTCGCTCTGCAGAAGTGCTCCCCGAGACGCCTaGTCAGTCCACGGCGCACGGCCCCGTCCAGGCGTCTCCGCGAAA +
Preference number: 5 (lower is better)
Translates to: LTWKSSLCRSAPRDA*SVHGARPRPGVSAK
Trigger: TTTCGCGGAGACGCCTGGACGGGGCCGTGCGCCGTGGACTGAGCAGGCGTCTCGGGGAGCACTTCTGCAGAGCGAGGACTTCCATGTGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333538.10
CDS CCA 90 bp AGGGATTTGAGGGTTTCTCTTCTGCACCAGCAAGTGGTTCGCCTCTaGACCTCTAGCCGCCGGCGCCGCGGACTCCGAGGCCGGCAGGCG +
Preference number: 5 (lower is better)
Translates to: RDLRVSLLHQQVVRL*TSSRRRRGLRGRQA
Trigger: CGCCTGCCGGCCTCGGAGTCCGCGGCGCCGGCGGCTAGAGGTCCAGAGGCGAACCACTTGCTGGTGCAGAAGAGAAACCCTCAAATCCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333538.10
CDS CCA 90 bp CCCCTGCTCGTCCCACCTCAAGGATGCTCGGGCGGCGGAGACGGCTaGGAGGTCGGATTGGTGGTGGGGAGAACGGAATCGCTCACATGG +
Preference number: 5 (lower is better)
Translates to: PLLVPPQGCSGGGDG*EVGLVVGRTESLTW
Trigger: CCATGTGAGCGATTCCGTTCTCCCCACCACCAATCCGACCTCCCAGCCGTCTCCGCCGCCCGAGCATCCTTGAGGTGGGACGAGCAGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333538.10
CDS-3UTR CAA 90 bp GGAACGCACAGCCAGACACACACACACACACCCTGCCACGCACAGCACGCAGGCGCGATGGGCCGGCACTaGGCCAGGAAGAGCACGAAG +
Preference number: 5 (lower is better)
Translates to: GTHSQTHTHTPCHAQHAGAMGRH*ARKSTK
Trigger: CTTCGTGCTCTTCCTGGCCAAGTGCCGGCCCATCGC...GCCTGCGTGCTGTGCGTGGCAGGGTGTGTGTGTGTGTGTCTGGCTGTGCGTTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333538.10
CDS-3UTR CAA 90 bp AGAGATGAGACACAGGAGGGGACCCTGCCAGTCCCAGATCCTGATTCTGGGATGCTGTGCGCGCTGAGGTaGGCCACCTCGGCGCGCGGC +
Preference number: 5 (lower is better)
Translates to: RDETQEGTLPVPDPDSGMLCALR*ATSARG
Trigger: GCCGCGCGCCGAGGTGGCCAACCTCAGCGCGCACAG...CATCCCAGAATCAGGATCTGGGACTGGCAGGGTCCCCTCCTGTGTCTCATCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333538.10
CDS TCA 90 bp CGGCGCACGGCCCCGTCCAGGCGTCTCCGCGAAAGGCCAGGGATTTaGGGGTTTCTCTTCTGCACCAGCAAGTGGTTCGCCTCTGGACCT +
Preference number: 5 (lower is better)
Translates to: RRTAPSRRLRERPGI*GFLFCTSKWFASGP
Trigger: AGGTCCAGAGGCGAACCACTTGCTGGTGCAGAAGAGAAACCCTCAAATCCCTGGCCTTTCGCGGAGACGCCTGGACGGGGCCGTGCGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333538.10
CDS CCA 90 bp TCTCGTGGAAGGCGTCTCCGCTGCGCACCGCGATGGGCCGGCACTTaGCCAGGAAGAGCACGAAGCCGGCTACCGCGATCAAGTTCAACA +
Preference number: 5 (lower is better)
Translates to: SRGRRLRCAPRWAGT*PGRARSRLPRSSST
Trigger: TGTTGAACTTGATCGCGGTAGCCGGCTTCGTGCTCTTCCTGGCCAAGTGCCGGCCCATCGCGGTGCGCAGCGGAGACGCCTTCCACGAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333538.10
CDS GCA 90 bp TTGGTGGTGGGGAGAACGGAATCGCTCACATGGAAGTCCTCGCTCTaGAGAAGTGCTCCCCGAGACGCCTGCTCAGTCCACGGCGCACGG +
Preference number: 5 (lower is better)
Translates to: LVVGRTESLTWKSSL*RSAPRDACSVHGAR
Trigger: CCGTGCGCCGTGGACTGAGCAGGCGTCTCGGGGAGCACTTCTGCAGAGCGAGGACTTCCATGTGAGCGATTCCGTTCTCCCCACCACCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333538.10
CDS CCA 90 bp CTCAAGGATGCTCGGGCGGCGGAGACGGCTGGGAGGTCGGATTGGTaGTGGGGAGAACGGAATCGCTCACATGGAAGTCCTCGCTCTGCA +
Preference number: 5 (lower is better)
Translates to: LKDARAAETAGRSDW*WGERNRSHGSPRSA
Trigger: TGCAGAGCGAGGACTTCCATGTGAGCGATTCCGTTCTCCCCACCACCAATCCGACCTCCCAGCCGTCTCCGCCGCCCGAGCATCCTTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333538.10
CDS CCA 90 bp CACCTCAAGGATGCTCGGGCGGCGGAGACGGCTGGGAGGTCGGATTaGTGGTGGGGAGAACGGAATCGCTCACATGGAAGTCCTCGCTCT +
Preference number: 5 (lower is better)
Translates to: HLKDARAAETAGRSD*WWGERNRSHGSPRS
Trigger: AGAGCGAGGACTTCCATGTGAGCGATTCCGTTCTCCCCACCACCAATCCGACCTCCCAGCCGTCTCCGCCGCCCGAGCATCCTTGAGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333538.10
CDS CCA 90 bp GGCTGGGAGGTCGGATTGGTGGTGGGGAGAACGGAATCGCTCACATaGAAGTCCTCGCTCTGCAGAAGTGCTCCCCGAGACGCCTGCTCA +
Preference number: 5 (lower is better)
Translates to: GWEVGLVVGRTESLT*KSSLCRSAPRDACS
Trigger: TGAGCAGGCGTCTCGGGGAGCACTTCTGCAGAGCGAGGACTTCCATGTGAGCGATTCCGTTCTCCCCACCACCAATCCGACCTCCCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333538.10
CDS CCA 90 bp AAGGATGCTCGGGCGGCGGAGACGGCTGGGAGGTCGGATTGGTGGTaGGGAGAACGGAATCGCTCACATGGAAGTCCTCGCTCTGCAGAA +
Preference number: 5 (lower is better)
Translates to: KDARAAETAGRSDWW*GERNRSHGSPRSAE
Trigger: TTCTGCAGAGCGAGGACTTCCATGTGAGCGATTCCGTTCTCCCCACCACCAATCCGACCTCCCAGCCGTCTCCGCCGCCCGAGCATCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333538.10
CDS CCA 90 bp CAGCGCTTGTACAGGCTGCTCTTGACCTTGTCGCAGTCCAGGAGCTaGGGCAGCCGACTCTTGGAGTTGTCCACCAGGCAGCGGGTGTCA +
Preference number: 5 (lower is better)
Translates to: QRLYRLLLTLSQSRS*GSRLLELSTRQRVS
Trigger: TGACACCCGCTGCCTGGTGGACAACTCCAAGAGTCGGCTGCCCCAGCTCCTGGACTGCGACAAGGTCAAGAGCAGCCTGTACAAGCGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333538.10
ENST00000467723.1
ENST00000498380.6
ENST00000618959.1
CDS-3UTR CAA 90 bp AGGTGTCATCTGGGTAGAAGTAACCTCGGAGGAAATAGTGCCTGGTCCTCACTGGCACAGCCTCCCACCTaGGCCCGCAGGCGGCCGTCG +
Preference number: 5 (lower is better)
Translates to: RCHLGRSNLGGNSAWSSLAQPPT*ARRRPS
Trigger: CGACGGCCGCCTGCGGGCCAAGGTGGGAGGCTGTGC...CAGTGAGGACCAGGCACTATTTCCTCCGAGGTTACTTCTACCCAGATGACACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333538.10
CDS-3UTR CAA 90 bp AGGTGTCATCTGGGTAGAAGTAACCTCGGAGGAAATAGTGCCTGGTCCTCACTGCCCGGGCAGGCGCCTTaGTTCCGCTCACCGACCCGC +
Preference number: 5 (lower is better)
Translates to: RCHLGRSNLGGNSAWSSLPGQAP*FRSPTR
Trigger: GCGGGTCGGTGAGCGGAACAAAGGCGCCTGCCCGGG...CAGTGAGGACCAGGCACTATTTCCTCCGAGGTTACTTCTACCCAGATGACACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333538.10
CDS-3UTR CAA 90 bp AGGTTCTGGATGGAGGACCGCTGCTTCTCCCCGGTGGCAGCCTCTGGGAGTCAGCAGACGTCTTTTGCCTaGTTGTTGCGAAGCTCCCCG +
Preference number: 5 (lower is better)
Translates to: RFWMEDRCFSPVAASGSQQTSFA*LLRSSP
Trigger: CGGGGAGCTTCGCAACAACAAGGCAAAAGACGTCTG...CTGACTCCCAGAGGCTGCCACCGGGGAGAAGCAGCGGTCCTCCATCCAGAACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CAA 90 bp TTGCTTCAGCCCTTAGGTTCTGGATGGAGGACCGCTGCTTCTCCCCGGTGGCAGCTGCCTCCCACCGTGTaGATGGCTGGAGTTCAGCAG +
Preference number: 5 (lower is better)
Translates to: LLQPLGSGWRTAASPRWQLPPTV*MAGVQQ
Trigger: CTGCTGAACTCCAGCCATCAACACGGTGGGAGGCAG...CTGCCACCGGGGAGAAGCAGCGGTCCTCCATCCAGAACCTAAGGGCTGAAGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS TCA 90 bp TACCGCGATCAAGTTCAACACCAACAGCACTTTGACTCTTCTCAGTaGAGCCATCAAACAGCCCGGCCGGCCCTCGCCCCGGACCTGCGC +
Preference number: 5 (lower is better)
Translates to: YRDQVQHQQHFDSSQ*SHQTARPALAPDLR
Trigger: GCGCAGGTCCGGGGCGAGGGCCGGCCGGGCTGTTTGATGGCTTCACTGAGAAGAGTCAAAGTGCTGTTGGTGTTGAACTTGATCGCGGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333538.10
CDS TCA 90 bp CCAGCTCCCTCCCTCTACTTGATGGAGTTCTTAATGGTCCACCTCTaGCCTGTGCAGCTGCGGAGGATGAGGTCGATGCCAGCCAGGCCC +
Preference number: 5 (lower is better)
Translates to: PAPSLYLMEFLMVHL*PVQLRRMRSMPARP
Trigger: GGGCCTGGCTGGCATCGACCTCATCCTCCGCAGCTGCACAGGTCAGAGGTGGACCATTAAGAACTCCATCAAGTAGAGGGAGGGAGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333538.10
ENST00000467723.1
ENST00000498380.6
ENST00000618959.1
CDS-3UTR CAA 90 bp ATGGGACAGCCTCCCATCGGGGGCACCCCACAGGGCAGGGCTGAGACACATCCTATGAGCCCAAGGGATTaGGATAAGCCATTCAGCTGC +
Preference number: 5 (lower is better)
Translates to: MGQPPIGGTPQGRAETHPMSPRD*DKPFSC
Trigger: GCAGCTGAATGGCTTATCCAAATCCCTTGGGCTCAT...AGGATGTGTCTCAGCCCTGCCCTGTGGGGTGCCCCCGATGGGAGGCTGTCCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333538.10
CDS-3UTR CAA 90 bp ATGGGACAGCCTCCCATCGGGGGCACCCCACAGGGCAGGGCTGAGACACATCCTAGGTCCTTGGAGTACTaGAGCTCCTTACACTTGGTG +
Preference number: 5 (lower is better)
Translates to: MGQPPIGGTPQGRAETHPRSLEY*SSLHLV
Trigger: CACCAAGTGTAAGGAGCTCAAGTACTCCAAGGACCT...AGGATGTGTCTCAGCCCTGCCCTGTGGGGTGCCCCCGATGGGAGGCTGTCCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CAA 90 bp GGAACGCACAGCCAGACACACACACACACACCCTGCCACGCACAGCACGCAGGCGGCACGGATACAATATaGCTGTGTGGTTCTCCAGCG +
Preference number: 5 (lower is better)
Translates to: GTHSQTHTHTPCHAQHAGGTDTI*LCGSPA
Trigger: CGCTGGAGAACCACACAGCAATATTGTATCCGTGCC...GCCTGCGTGCTGTGCGTGGCAGGGTGTGTGTGTGTGTGTCTGGCTGTGCGTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CAA 90 bp ACGTCACCAAATGAGACACTGCGAATCCCACACAGGGCAAGGGGGCAGCTACAGTGGGGCAGCCGACTCTaGGAGTTGTCCACCAGGCAG +
Preference number: 5 (lower is better)
Translates to: TSPNETLRIPHRARGQLQWGSRL*ELSTRQ
Trigger: CTGCCTGGTGGACAACTCCAAGAGTCGGCTGCCCCA...CTGTAGCTGCCCCCTTGCCCTGTGTGGGATTCGCAGTGTCTCATTTGGTGACGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CAA 90 bp TCAGCATCGTCACACACTCCGGAACGCACAGCCAGACACACACACACACACCCTTGGGGCAGCCGACTCTaGGAGTTGTCCACCAGGCAG +
Preference number: 5 (lower is better)
Translates to: SASSHTPERTARHTHTHPWGSRL*ELSTRQ
Trigger: CTGCCTGGTGGACAACTCCAAGAGTCGGCTGCCCCA...AGGGTGTGTGTGTGTGTGTCTGGCTGTGCGTTCCGGAGTGTGTGACGATGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CAA 90 bp GGAACGCACAGCCAGACACACACACACACACCCTGCCACGCACAGCACGCAGGCATGAAGTTCCAGCGCTaGTACAGGCTGCTCTTGACC +
Preference number: 5 (lower is better)
Translates to: GTHSQTHTHTPCHAQHAGMKFQR*YRLLLT
Trigger: GGTCAAGAGCAGCCTGTACAAGCGCTGGAACTTCAT...GCCTGCGTGCTGTGCGTGGCAGGGTGTGTGTGTGTGTGTCTGGCTGTGCGTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CAA 90 bp CTGGCAGCCTTTGCTTCAGCCCTTAGGTTCTGGATGGAGGACCGCTGCTTCTCCCTGCCTCCCACCGTGTaGATGGCTGGAGTTCAGCAG +
Preference number: 5 (lower is better)
Translates to: LAAFASALRFWMEDRCFSLPPTV*MAGVQQ
Trigger: CTGCTGAACTCCAGCCATCAACACGGTGGGAGGCAG...GGAGAAGCAGCGGTCCTCCATCCAGAACCTAAGGGCTGAAGCAAAGGCTGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CAA 90 bp AGAGATGAGACACAGGAGGGGACCCTGCCAGTCCCAGATCCTGATTCTGGGATGCATCCTGCGGGGCCCTaGTGGCTGAGATCCTACTGC +
Preference number: 5 (lower is better)
Translates to: RDETQEGTLPVPDPDSGMHPAGP*WLRSYC
Trigger: GCAGTAGGATCTCAGCCACAAGGGCCCCGCAGGATG...CATCCCAGAATCAGGATCTGGGACTGGCAGGGTCCCCTCCTGTGTCTCATCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS TCA 90 bp GCACGAAGCCGGCTACCGCGATCAAGTTCAACACCAACAGCACTTTaGCTCTTCTCAGTGAAGCCATCAAACAGCCCGGCCGGCCCTCGC +
Preference number: 5 (lower is better)
Translates to: ARSRLPRSSSTPTAL*LFSVKPSNSPAGPR
Trigger: GCGAGGGCCGGCCGGGCTGTTTGATGGCTTCACTGAGAAGAGTCAAAGTGCTGTTGGTGTTGAACTTGATCGCGGTAGCCGGCTTCGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333538.10
CDS GCA 90 bp GTAGCGGGCAAGCTGTGGTCCCCAGCCATGGCACGGATACAATATTaGTGTGTGGTTCTCCAGCGGCCCCTGGTCCAAGCAGACGTCTTT +
Preference number: 5 (lower is better)
Translates to: VAGKLWSPAMARIQY*CVVLQRPLVQADVF
Trigger: AAAGACGTCTGCTTGGACCAGGGGCCGCTGGAGAACCACACAGCAATATTGTATCCGTGCCATGGCTGGGGACCACAGCTTGCCCGCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333538.10
ENST00000467723.1
ENST00000498380.6
ENST00000618959.1
CDS-3UTR CAA 90 bp TTGCTTCAGCCCTTAGGTTCTGGATGGAGGACCGCTGCTTCTCCCCGGTGGCAGCCGAAGAACTTCCTGTaGACCACGAACGAGCAGCCT +
Preference number: 5 (lower is better)
Translates to: LLQPLGSGWRTAASPRWQPKNFL*TTNEQP
Trigger: AGGCTGCTCGTTCGTGGTCAACAGGAAGTTCTTCGG...CTGCCACCGGGGAGAAGCAGCGGTCCTCCATCCAGAACCTAAGGGCTGAAGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CAA 90 bp AGGTTCTGGATGGAGGACCGCTGCTTCTCCCCGGTGGCAGCCTCTGGGAGTCAGGCTCCCTCCCTCTACTaGATGGAGTTCTTAATGGTC +
Preference number: 5 (lower is better)
Translates to: RFWMEDRCFSPVAASGSQAPSLY*MEFLMV
Trigger: GACCATTAAGAACTCCATCAAGTAGAGGGAGGGAGC...CTGACTCCCAGAGGCTGCCACCGGGGAGAAGCAGCGGTCCTCCATCCAGAACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CAA 90 bp CTGGCAGCCTTTGCTTCAGCCCTTAGGTTCTGGATGGAGGACCGCTGCTTCTCCCAGGGTGCAGGAAACTaGTGGGCAGCTGAATGCCTG +
Preference number: 5 (lower is better)
Translates to: LAAFASALRFWMEDRCFSQGAGN*WAAECL
Trigger: CAGGCATTCAGCTGCCCACAAGTTTCCTGCACCCTG...GGAGAAGCAGCGGTCCTCCATCCAGAACCTAAGGGCTGAAGCAAAGGCTGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CAA 90 bp GTCATCTGGGTAGAAGTAACCTCGGAGGAAATAGTGCCTGGTCCTCACTGCCTCGGGGCAGTAGCTGCCTaGGGGCGTGAACAGGCAGGT +
Preference number: 5 (lower is better)
Translates to: VIWVEVTSEEIVPGPHCLGAVAA*GREQAG
Trigger: ACCTGCCTGTTCACGCCCCAAGGCAGCTACTGCCCC...GAGGCAGTGAGGACCAGGCACTATTTCCTCCGAGGTTACTTCTACCCAGATGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS CCA 90 bp GGGAGAGAGGGTCTGGAAGTTCAAGGCCAGCCCCAAGTCCACCTCTaGAATGTACCCTGCAGGCCTCGGCTGTGCAAACAGAAAGTCCTA +
Preference number: 5 (lower is better)
Translates to: GREGLEVQGQPQVHL*NVPCRPRLCKQKVL
Trigger: TAGGACTTTCTGTTTGCACAGCCGAGGCCTGCAGGGTACATTCCAGAGGTGGACTTGGGGCTGGCCTTGAACTTCCAGACCCTCTCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467723.1
CDS-3UTR CAA 90 bp GGAACGCACAGCCAGACACACACACACACACCCTGCCACGCACAGCACGCAGGCAACACCAACAGCACTTaGACTCTTCTCAGTGAAGCC +
Preference number: 5 (lower is better)
Translates to: GTHSQTHTHTPCHAQHAGNTNST*TLLSEA
Trigger: GGCTTCACTGAGAAGAGTCAAAGTGCTGTTGGTGTT...GCCTGCGTGCTGTGCGTGGCAGGGTGTGTGTGTGTGTGTCTGGCTGTGCGTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333538.10
CDS-3UTR CAA 90 bp CTGGCAGCCTTTGCTTCAGCCCTTAGGTTCTGGATGGAGGACCGCTGCTTCTCCTTGTACAGGCTGCTCTaGACCTTGTCGCAGTCCAGG +
Preference number: 5 (lower is better)
Translates to: LAAFASALRFWMEDRCFSLYRLL*TLSQSR
Trigger: CCTGGACTGCGACAAGGTCAAGAGCAGCCTGTACAA...GGAGAAGCAGCGGTCCTCCATCCAGAACCTAAGGGCTGAAGCAAAGGCTGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CAA 90 bp GTAAGACGTCACCAAATGAGACACTGCGAATCCCACACAGGGCAAGGGGGCAGCCAGCGTCCCGTGCCCTaGTTCATGATGGCTCCATTC +
Preference number: 5 (lower is better)
Translates to: VRRHQMRHCESHTGQGGSQRPVP*FMMAPF
Trigger: GAATGGAGCCATCATGAACAAGGGCACGGGACGCTG...GCTGCCCCCTTGCCCTGTGTGGGATTCGCAGTGTCTCATTTGGTGACGTCTTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CAA 90 bp ACGTCACCAAATGAGACACTGCGAATCCCACACAGGGCAAGGGGGCAGCTACAGCAGCGTCCCGTGCCCTaGTTCATGATGGCTCCATTC +
Preference number: 5 (lower is better)
Translates to: TSPNETLRIPHRARGQLQQRPVP*FMMAPF
Trigger: GAATGGAGCCATCATGAACAAGGGCACGGGACGCTG...CTGTAGCTGCCCCCTTGCCCTGTGTGGGATTCGCAGTGTCTCATTTGGTGACGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CAA 90 bp AGGTGTCATCTGGGTAGAAGTAACCTCGGAGGAAATAGTGCCTGGTCCTCACTGGGGGCAGTAGCTGCCTaGGGGCGTGAACAGGCAGGT +
Preference number: 5 (lower is better)
Translates to: RCHLGRSNLGGNSAWSSLGAVAA*GREQAG
Trigger: ACCTGCCTGTTCACGCCCCAAGGCAGCTACTGCCCC...CAGTGAGGACCAGGCACTATTTCCTCCGAGGTTACTTCTACCCAGATGACACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS GCA 90 bp CTGGAAGTTCAAGGCCAGCCCCAAGTCCACCTCTGGAATGTACCCTaGAGGCCTCGGCTGTGCAAACAGAAAGTCCTAGCTGAGAGGAGA +
Preference number: 5 (lower is better)
Translates to: LEVQGQPQVHLWNVP*RPRLCKQKVLAERR
Trigger: TCTCCTCTCAGCTAGGACTTTCTGTTTGCACAGCCGAGGCCTGCAGGGTACATTCCAGAGGTGGACTTGGGGCTGGCCTTGAACTTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467723.1
CDS-3UTR CAA 90 bp CTGGCAGCCTTTGCTTCAGCCCTTAGGTTCTGGATGGAGGACCGCTGCTTCTCCATCTGGGGCAGGTCCTaGGAGTACTTGAGCTCCTTA +
Preference number: 5 (lower is better)
Translates to: LAAFASALRFWMEDRCFSIWGRS*EYLSSL
Trigger: TAAGGAGCTCAAGTACTCCAAGGACCTGCCCCAGAT...GGAGAAGCAGCGGTCCTCCATCCAGAACCTAAGGGCTGAAGCAAAGGCTGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CAA 90 bp GTAAGACGTCACCAAATGAGACACTGCGAATCCCACACAGGGCAAGGGGGCAGCTTGTACAGGCTGCTCTaGACCTTGTCGCAGTCCAGG +
Preference number: 5 (lower is better)
Translates to: VRRHQMRHCESHTGQGGSLYRLL*TLSQSR
Trigger: CCTGGACTGCGACAAGGTCAAGAGCAGCCTGTACAA...GCTGCCCCCTTGCCCTGTGTGGGATTCGCAGTGTCTCATTTGGTGACGTCTTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CAA 90 bp CTGGCAGCCTTTGCTTCAGCCCTTAGGTTCTGGATGGAGGACCGCTGCTTCTCCATGAAGTTCCAGCGCTaGTACAGGCTGCTCTTGACC +
Preference number: 5 (lower is better)
Translates to: LAAFASALRFWMEDRCFSMKFQR*YRLLLT
Trigger: GGTCAAGAGCAGCCTGTACAAGCGCTGGAACTTCAT...GGAGAAGCAGCGGTCCTCCATCCAGAACCTAAGGGCTGAAGCAAAGGCTGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CAA 90 bp CTGGGATGGGAGATGTGGAGGAGAACTGGACAGTCTTGCTCCTCAGTACCAGGTCAGGGTGCAGGAAACTaGTGGGCAGCTGAATGCCTG +
Preference number: 5 (lower is better)
Translates to: LGWEMWRRTGQSCSSVPGQGAGN*WAAECL
Trigger: CAGGCATTCAGCTGCCCACAAGTTTCCTGCACCCTG...ACCTGGTACTGAGGAGCAAGACTGTCCAGTTCTCCTCCACATCTCCCATCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CAA 90 bp AGAGATGAGACACAGGAGGGGACCCTGCCAGTCCCAGATCCTGATTCTGGGATGGAGAACTGGACAGTCTaGCTCCTCAGTACCAGGTCC +
Preference number: 5 (lower is better)
Translates to: RDETQEGTLPVPDPDSGMENWTV*LLSTRS
Trigger: GGACCTGGTACTGAGGAGCAAGACTGTCCAGTTCTC...CATCCCAGAATCAGGATCTGGGACTGGCAGGGTCCCCTCCTGTGTCTCATCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CAA 90 bp CTGGGATGGGAGATGTGGAGGAGAACTGGACAGTCTTGCTCCTCAGTACCAGGTGGGTCCTGGCAGCCTTaGCTTCAGCCCTTAGGTTCT +
Preference number: 5 (lower is better)
Translates to: LGWEMWRRTGQSCSSVPGGSWQP*LQPLGS
Trigger: AGAACCTAAGGGCTGAAGCAAAGGCTGCCAGGACCC...ACCTGGTACTGAGGAGCAAGACTGTCCAGTTCTCCTCCACATCTCCCATCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CAA 90 bp ACGTCACCAAATGAGACACTGCGAATCCCACACAGGGCAAGGGGGCAGCTACAGCGAAAGGCCAGGGATTaGAGGGTTTCTCTTCTGCAC +
Preference number: 5 (lower is better)
Translates to: TSPNETLRIPHRARGQLQRKARD*RVSLLH
Trigger: GTGCAGAAGAGAAACCCTCAAATCCCTGGCCTTTCG...CTGTAGCTGCCCCCTTGCCCTGTGTGGGATTCGCAGTGTCTCATTTGGTGACGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333538.10
CDS-3UTR CAA 90 bp TCAGCATCGTCACACACTCCGGAACGCACAGCCAGACACACACACACACACCCTATCTGGGGCAGGTCCTaGGAGTACTTGAGCTCCTTA +
Preference number: 5 (lower is better)
Translates to: SASSHTPERTARHTHTHPIWGRS*EYLSSL
Trigger: TAAGGAGCTCAAGTACTCCAAGGACCTGCCCCAGAT...AGGGTGTGTGTGTGTGTGTCTGGCTGTGCGTTCCGGAGTGTGTGACGATGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CAA 90 bp GGAACGCACAGCCAGACACACACACACACACCCTGCCACGCACAGCACGCAGGCCCACAGAGCCATACCTaGATTCCCAGTTCAATATTT +
Preference number: 5 (lower is better)
Translates to: GTHSQTHTHTPCHAQHAGPQSHT*IPSSIF
Trigger: AAATATTGAACTGGGAATCAAGGTATGGCTCTGTGG...GCCTGCGTGCTGTGCGTGGCAGGGTGTGTGTGTGTGTGTCTGGCTGTGCGTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CAA 90 bp CTGGGATGGGAGATGTGGAGGAGAACTGGACAGTCTTGCTCCTCAGTACCAGGTCAGACGTCTTTTGCCTaGTTGTTGCGAAGCTCCCCG +
Preference number: 5 (lower is better)
Translates to: LGWEMWRRTGQSCSSVPGQTSFA*LLRSSP
Trigger: CGGGGAGCTTCGCAACAACAAGGCAAAAGACGTCTG...ACCTGGTACTGAGGAGCAAGACTGTCCAGTTCTCCTCCACATCTCCCATCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CAA 90 bp ACGTCACCAAATGAGACACTGCGAATCCCACACAGGGCAAGGGGGCAGCTACAGGGCACGGATACAATATaGCTGTGTGGTTCTCCAGCG +
Preference number: 5 (lower is better)
Translates to: TSPNETLRIPHRARGQLQGTDTI*LCGSPA
Trigger: CGCTGGAGAACCACACAGCAATATTGTATCCGTGCC...CTGTAGCTGCCCCCTTGCCCTGTGTGGGATTCGCAGTGTCTCATTTGGTGACGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CAA 90 bp CTGGCAGCCTTTGCTTCAGCCCTTAGGTTCTGGATGGAGGACCGCTGCTTCTCCGCTCCCTCCCTCTACTaGATGGAGTTCTTAATGGTC +
Preference number: 5 (lower is better)
Translates to: LAAFASALRFWMEDRCFSAPSLY*MEFLMV
Trigger: GACCATTAAGAACTCCATCAAGTAGAGGGAGGGAGC...GGAGAAGCAGCGGTCCTCCATCCAGAACCTAAGGGCTGAAGCAAAGGCTGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CAA 90 bp GTCATCTGGGTAGAAGTAACCTCGGAGGAAATAGTGCCTGGTCCTCACTGCCTCGGGTCCTGGCAGCCTTaGCTTCAGCCCTTAGGTTCT +
Preference number: 5 (lower is better)
Translates to: VIWVEVTSEEIVPGPHCLGSWQP*LQPLGS
Trigger: AGAACCTAAGGGCTGAAGCAAAGGCTGCCAGGACCC...GAGGCAGTGAGGACCAGGCACTATTTCCTCCGAGGTTACTTCTACCCAGATGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CAA 90 bp AGAGATGAGACACAGGAGGGGACCCTGCCAGTCCCAGATCCTGATTCTGGGATGAGGTCCTTGGAGTACTaGAGCTCCTTACACTTGGTG +
Preference number: 5 (lower is better)
Translates to: RDETQEGTLPVPDPDSGMRSLEY*SSLHLV
Trigger: CACCAAGTGTAAGGAGCTCAAGTACTCCAAGGACCT...CATCCCAGAATCAGGATCTGGGACTGGCAGGGTCCCCTCCTGTGTCTCATCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CAA 90 bp CCTGATTCTGGGATGGGAGATGTGGAGGAGAACTGGACAGTCTTGCTCCTCAGTCCGAAGAACTTCCTGTaGACCACGAACGAGCAGCCT +
Preference number: 5 (lower is better)
Translates to: PDSGMGDVEENWTVLLLSPKNFL*TTNEQP
Trigger: AGGCTGCTCGTTCGTGGTCAACAGGAAGTTCTTCGG...ACTGAGGAGCAAGACTGTCCAGTTCTCCTCCACATCTCCCATCCCAGAATCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CAA 90 bp AGAGATGAGACACAGGAGGGGACCCTGCCAGTCCCAGATCCTGATTCTGGGATGCCAAGCAGACGTCTTTaGCCTTGTTGTTGCGAAGCT +
Preference number: 5 (lower is better)
Translates to: RDETQEGTLPVPDPDSGMPSRRL*PCCCEA
Trigger: AGCTTCGCAACAACAAGGCAAAAGACGTCTGCTTGG...CATCCCAGAATCAGGATCTGGGACTGGCAGGGTCCCCTCCTGTGTCTCATCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CAA 90 bp ACGTCACCAAATGAGACACTGCGAATCCCACACAGGGCAAGGGGGCAGCTACAGTCCTCTTCGTCGCTGTaGTCATCCACCAGAATGATT +
Preference number: 5 (lower is better)
Translates to: TSPNETLRIPHRARGQLQSSSSL*SSTRMI
Trigger: AATCATTCTGGTGGATGACAACAGCGACGAAGAGGA...CTGTAGCTGCCCCCTTGCCCTGTGTGGGATTCGCAGTGTCTCATTTGGTGACGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CAA 90 bp AGAGATGAGACACAGGAGGGGACCCTGCCAGTCCCAGATCCTGATTCTGGGATGTCCTCTTCGTCGCTGTaGTCATCCACCAGAATGATT +
Preference number: 5 (lower is better)
Translates to: RDETQEGTLPVPDPDSGMSSSSL*SSTRMI
Trigger: AATCATTCTGGTGGATGACAACAGCGACGAAGAGGA...CATCCCAGAATCAGGATCTGGGACTGGCAGGGTCCCCTCCTGTGTCTCATCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CAA 90 bp CTGGGATGGGAGATGTGGAGGAGAACTGGACAGTCTTGCTCCTCAGTACCAGGTTTGTCCTGTTTGATGTaGTCAATGGAGGGGAGGATC +
Preference number: 5 (lower is better)
Translates to: LGWEMWRRTGQSCSSVPGLSCLM*SMEGRI
Trigger: GATCCTCCCCTCCATTGACAACATCAAACAGGACAA...ACCTGGTACTGAGGAGCAAGACTGTCCAGTTCTCCTCCACATCTCCCATCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CAA 90 bp GAGGAGAACTGGACAGTCTTGCTCCTCAGTACCAGGTCCACATCAGAGGCTGTGTTGTCCTGTTTGATGTaGTCAATGGAGGGGAGGATC +
Preference number: 5 (lower is better)
Translates to: EENWTVLLLSTRSTSEAVLSCLM*SMEGRI
Trigger: GATCCTCCCCTCCATTGACAACATCAAACAGGACAA...CACAGCCTCTGATGTGGACCTGGTACTGAGGAGCAAGACTGTCCAGTTCTCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS-3UTR CAA 90 bp CCTGATTCTGGGATGGGAGATGTGGAGGAGAACTGGACAGTCTTGCTCCTCAGTCCACAGAGCCATACCTaGATTCCCAGTTCAATATTT +
Preference number: 5 (lower is better)
Translates to: PDSGMGDVEENWTVLLLSPQSHT*IPSSIF
Trigger: AAATATTGAACTGGGAATCAAGGTATGGCTCTGTGG...ACTGAGGAGCAAGACTGTCCAGTTCTCCTCCACATCTCCCATCCCAGAATCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333538.10
ENST00000618959.1
CDS CCA 90 bp TGTAATCGTCCATCCAGACCTCAGCAACGCGAAGAGCATTCCTCTTaGTGTAGAAGCCAATGTTGCTATTATATGGCTTCTTCTTCCGCT +
Preference number: 5 (lower is better)
Translates to: CNRPSRPQQREEHSS*CRSQCCYYMASSSA
Trigger: AGCGGAAGAAGAAGCCATATAATAGCAACATTGGCTTCTACACCAAGAGGAATGCTCTTCGCGTTGCTGAGGTCTGGATGGACGATTACA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333538.10
ENST00000467723.1
ENST00000498380.6
ENST00000618959.1
CDS CCA 90 bp GACTTTCAGGGTGAGTGTTATGAGTGTTACATCTCAAAGGCGGCGTaGACCCAAAGAATATACAGCAGCAAGATTTACTGTGAAGAGCGA +
Preference number: 5 (lower is better)
Translates to: DFQGECYECYISKAA*TQRIYSSKIYCEER
Trigger: TCGCTCTTCACAGTAAATCTTGCTGCTGTATATTCTTTGGGTCCACGCCGCCTTTGAGATGTAACACTCATAACACTCACCCTGAAAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498380.6
CDS CCA 72 bp CTGAGGTTGGCCACCTCGGCGCGCGGCCGGATCTCGTaGAAGGCGTCTCCGCTGCGCACCGCGATGGGCCGG +
Preference number: 6 (lower is better)
Translates to: LRLATSARGRIS*KASPLRTAMGR
Trigger: CCGGCCCATCGCGGTGCGCAGCGGAGACGCCTTCCACGAGATCCGGCCGCGCGCCGAGGTGGCCAACCTCAG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333538.10
CDS TCA 72 bp GGACCGCATCCTGGATGGGGCTGGCGCTGTGCGCGCTaGGGTTGGCCACCTCGGCGCGCGGCCGGATCTCGT +
Preference number: 6 (lower is better)
Translates to: GPHPGWGWRCAR*GWPPRRAAGSR
Trigger: ACGAGATCCGGCCGCGCGCCGAGGTGGCCAACCTCAGCGCGCACAGCGCCAGCCCCATCCAGGATGCGGTCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333538.10
CDS GCA 72 bp CGGCGCGCGGCCGGATCTCGTGGAAGGCGTCTCCGCTaGGCACCGCGATGGGCCGGCACTTGGCCAGGAAGA +
Preference number: 6 (lower is better)
Translates to: RRAAGSRGRRLR*APRWAGTWPGR
Trigger: TCTTCCTGGCCAAGTGCCGGCCCATCGCGGTGCGCAGCGGAGACGCCTTCCACGAGATCCGGCCGCGCGCCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333538.10
CDS CAA 72 bp CTTCAGCGGAAGACCCGCTCCCCCGGGCAGGCGCCTTaGTTCCGCTCACCGACCCGCTCCATCGCGCCGGGC +
Preference number: 6 (lower is better)
Translates to: LQRKTRSPGQAP*FRSPTRSIAPG
Trigger: GCCCGGCGCGATGGAGCGGGTCGGTGAGCGGAACAAAGGCGCCTGCCCGGGGGAGCGGGTCTTCCGCTGAAG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333538.10
CDS CAA 90 bp ACCCGCGCTCTTCAGCGGAAGACCCGCTCCCCCGGGCAGGCGCCTTaGTTCCGCTCACCGACCCGCTCCATCGCGCCGGGCAGAGGGGAA +
Preference number: 6 (lower is better)
Translates to: TRALQRKTRSPGQAP*FRSPTRSIAPGRGE
Trigger: TTCCCCTCTGCCCGGCGCGATGGAGCGGGTCGGTGAGCGGAACAAAGGCGCCTGCCCGGGGGAGCGGGTCTTCCGCTGAAGAGCGCGGGT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333538.10
CDS CAA 72 bp GCATCCTGGATGGGGCTGGCGCTGTGCGCGCTGAGGTaGGCCACCTCGGCGCGCGGCCGGATCTCGTGGAAG +
Preference number: 6 (lower is better)
Translates to: ASWMGLALCALR*ATSARGRISWK
Trigger: CTTCCACGAGATCCGGCCGCGCGCCGAGGTGGCCAACCTCAGCGCGCACAGCGCCAGCCCCATCCAGGATGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333538.10
CDS CAA 90 bp TTCAGGACCGCATCCTGGATGGGGCTGGCGCTGTGCGCGCTGAGGTaGGCCACCTCGGCGCGCGGCCGGATCTCGTGGAAGGCGTCTCCG +
Preference number: 6 (lower is better)
Translates to: FRTASWMGLALCALR*ATSARGRISWKASP
Trigger: CGGAGACGCCTTCCACGAGATCCGGCCGCGCGCCGAGGTGGCCAACCTCAGCGCGCACAGCGCCAGCCCCATCCAGGATGCGGTCCTGAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333538.10
CDS GCA 72 bp AAGTCCTCGCTCTGCAGAAGTGCTCCCCGAGACGCCTaGTCAGTCCACGGCGCACGGCCCCGTCCAGGCGTC +
Preference number: 6 (lower is better)
Translates to: KSSLCRSAPRDA*SVHGARPRPGV
Trigger: GACGCCTGGACGGGGCCGTGCGCCGTGGACTGAGCAGGCGTCTCGGGGAGCACTTCTGCAGAGCGAGGACTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333538.10
CDS GCA 72 bp CTCACACACCAGACGGCCGGCAGGGATCCAAGCCCCTaGTCGTCCCACCTCAAGGATGCTCGGGCGGCGGAG +
Preference number: 6 (lower is better)
Translates to: LTHQTAGRDPSP*SSHLKDARAAE
Trigger: CTCCGCCGCCCGAGCATCCTTGAGGTGGGACGAGCAGGGGCTTGGATCCCTGCCGGCCGTCTGGTGTGTGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333538.10
CDS CCA 72 bp AGGCGTCTCCGCTGCGCACCGCGATGGGCCGGCACTTaGCCAGGAAGAGCACGAAGCCGGCTACCGCGATCA +
Preference number: 6 (lower is better)
Translates to: RRLRCAPRWAGT*PGRARSRLPRS
Trigger: TGATCGCGGTAGCCGGCTTCGTGCTCTTCCTGGCCAAGTGCCGGCCCATCGCGGTGCGCAGCGGAGACGCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333538.10
CDS CCA 72 bp GGATCTCGTGGAAGGCGTCTCCGCTGCGCACCGCGATaGGCCGGCACTTGGCCAGGAAGAGCACGAAGCCGG +
Preference number: 6 (lower is better)
Translates to: GSRGRRLRCAPR*AGTWPGRARSR
Trigger: CCGGCTTCGTGCTCTTCCTGGCCAAGTGCCGGCCCATCGCGGTGCGCAGCGGAGACGCCTTCCACGAGATCC
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333538.10
CDS CCA 72 bp TCCTCCAGCAGCGACAGGCGCTTCAGGACCGCATCCTaGATGGGGCTGGCGCTGTGCGCGCTGAGGTTGGCC +
Preference number: 6 (lower is better)
Translates to: SSSSDRRFRTAS*MGLALCALRLA
Trigger: GGCCAACCTCAGCGCGCACAGCGCCAGCCCCATCCAGGATGCGGTCCTGAAGCGCCTGTCGCTGCTGGAGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333538.10
CDS CAA 72 bp AAGGCGTCTCCGCTGCGCACCGCGATGGGCCGGCACTaGGCCAGGAAGAGCACGAAGCCGGCTACCGCGATC +
Preference number: 6 (lower is better)
Translates to: KASPLRTAMGRH*ARKSTKPATAI
Trigger: GATCGCGGTAGCCGGCTTCGTGCTCTTCCTGGCCAAGTGCCGGCCCATCGCGGTGCGCAGCGGAGACGCCTT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333538.10
CDS GCA 72 bp CAGGGATCCAAGCCCCTGCTCGTCCCACCTCAAGGATaGTCGGGCGGCGGAGACGGCTGGGAGGTCGGATTG +
Preference number: 6 (lower is better)
Translates to: QGSKPLLVPPQG*SGGGDGWEVGL
Trigger: CAATCCGACCTCCCAGCCGTCTCCGCCGCCCGAGCATCCTTGAGGTGGGACGAGCAGGGGCTTGGATCCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333538.10
CDS CCA 72 bp AGGGTTTCTCTTCTGCACCAGCAAGTGGTTCGCCTCTaGACCTCTAGCCGCCGGCGCCGCGGACTCCGAGGC +
Preference number: 6 (lower is better)
Translates to: RVSLLHQQVVRL*TSSRRRRGLRG
Trigger: GCCTCGGAGTCCGCGGCGCCGGCGGCTAGAGGTCCAGAGGCGAACCACTTGCTGGTGCAGAAGAGAAACCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333538.10
CDS CCA 72 bp CGGGCGGCGGAGACGGCTGGGAGGTCGGATTGGTGGTaGGGAGAACGGAATCGCTCACATGGAAGTCCTCGC +
Preference number: 6 (lower is better)
Translates to: RAAETAGRSDWW*GERNRSHGSPR
Trigger: GCGAGGACTTCCATGTGAGCGATTCCGTTCTCCCCACCACCAATCCGACCTCCCAGCCGTCTCCGCCGCCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333538.10
CDS CCA 72 bp GTCCCACCTCAAGGATGCTCGGGCGGCGGAGACGGCTaGGAGGTCGGATTGGTGGTGGGGAGAACGGAATCG +
Preference number: 6 (lower is better)
Translates to: VPPQGCSGGGDG*EVGLVVGRTES
Trigger: CGATTCCGTTCTCCCCACCACCAATCCGACCTCCCAGCCGTCTCCGCCGCCCGAGCATCCTTGAGGTGGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333538.10
CDS CCA 72 bp CCTTGTCGCAGTCCAGGAGCTGGGGCAGCCGACTCTTaGAGTTGTCCACCAGGCAGCGGGTGTCAGGGAGGA +
Preference number: 6 (lower is better)
Translates to: PCRSPGAGAADS*SCPPGSGCQGG
Trigger: TCCTCCCTGACACCCGCTGCCTGGTGGACAACTCCAAGAGTCGGCTGCCCCAGCTCCTGGACTGCGACAAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333538.10
ENST00000467723.1
ENST00000498380.6
ENST00000618959.1
CDS CAA 72 bp ACCTTGTCGCAGTCCAGGAGCTGGGGCAGCCGACTCTaGGAGTTGTCCACCAGGCAGCGGGTGTCAGGGAGG +
Preference number: 6 (lower is better)
Translates to: TLSQSRSWGSRL*ELSTRQRVSGR
Trigger: CCTCCCTGACACCCGCTGCCTGGTGGACAACTCCAAGAGTCGGCTGCCCCAGCTCCTGGACTGCGACAAGGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333538.10
ENST00000467723.1
ENST00000498380.6
ENST00000618959.1
CDS CAA 90 bp ACGGCGCACGGCCCCGTCCAGGCGTCTCCGCGAAAGGCCAGGGATTaGAGGGTTTCTCTTCTGCACCAGCAAGTGGTTCGCCTCTGGACC +
Preference number: 6 (lower is better)
Translates to: TAHGPVQASPRKARD*RVSLLHQQVVRLWT
Trigger: GGTCCAGAGGCGAACCACTTGCTGGTGCAGAAGAGAAACCCTCAAATCCCTGGCCTTTCGCGGAGACGCCTGGACGGGGCCGTGCGCCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333538.10
CDS CAA 90 bp ATCTCGTGGAAGGCGTCTCCGCTGCGCACCGCGATGGGCCGGCACTaGGCCAGGAAGAGCACGAAGCCGGCTACCGCGATCAAGTTCAAC +
Preference number: 6 (lower is better)
Translates to: ISWKASPLRTAMGRH*ARKSTKPATAIKFN
Trigger: GTTGAACTTGATCGCGGTAGCCGGCTTCGTGCTCTTCCTGGCCAAGTGCCGGCCCATCGCGGTGCGCAGCGGAGACGCCTTCCACGAGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333538.10
CDS CAA 90 bp TTGACCTTGTCGCAGTCCAGGAGCTGGGGCAGCCGACTCTTGGAGTaGTCCACCAGGCAGCGGGTGTCAGGGAGGAGTGTGGTGGTCCCC +
Preference number: 6 (lower is better)
Translates to: LTLSQSRSWGSRLLE*STRQRVSGRSVVVP
Trigger: GGGGACCACCACACTCCTCCCTGACACCCGCTGCCTGGTGGACAACTCCAAGAGTCGGCTGCCCCAGCTCCTGGACTGCGACAAGGTCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333538.10
ENST00000467723.1
ENST00000498380.6
ENST00000618959.1
CDS GCA 72 bp GGAATCGCTCACATGGAAGTCCTCGCTCTGCAGAAGTaGTCCCCGAGACGCCTGCTCAGTCCACGGCGCACG +
Preference number: 6 (lower is better)
Translates to: GIAHMEVLALQK*SPRRLLSPRRT
Trigger: CGTGCGCCGTGGACTGAGCAGGCGTCTCGGGGAGCACTTCTGCAGAGCGAGGACTTCCATGTGAGCGATTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333538.10
CDS CCA 72 bp GATGCTCGGGCGGCGGAGACGGCTGGGAGGTCGGATTaGTGGTGGGGAGAACGGAATCGCTCACATGGAAGT +
Preference number: 6 (lower is better)
Translates to: DARAAETAGRSD*WWGERNRSHGS
Trigger: ACTTCCATGTGAGCGATTCCGTTCTCCCCACCACCAATCCGACCTCCCAGCCGTCTCCGCCGCCCGAGCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333538.10
CDS CAA 90 bp CTGCTCTTGACCTTGTCGCAGTCCAGGAGCTGGGGCAGCCGACTCTaGGAGTTGTCCACCAGGCAGCGGGTGTCAGGGAGGAGTGTGGTG +
Preference number: 6 (lower is better)
Translates to: LLLTLSQSRSWGSRL*ELSTRQRVSGRSVV
Trigger: CACCACACTCCTCCCTGACACCCGCTGCCTGGTGGACAACTCCAAGAGTCGGCTGCCCCAGCTCCTGGACTGCGACAAGGTCAAGAGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333538.10
ENST00000467723.1
ENST00000498380.6
ENST00000618959.1
CDS CAA 72 bp GGCCCCGTCCAGGCGTCTCCGCGAAAGGCCAGGGATTaGAGGGTTTCTCTTCTGCACCAGCAAGTGGTTCGC +
Preference number: 6 (lower is better)
Translates to: GPVQASPRKARD*RVSLLHQQVVR
Trigger: GCGAACCACTTGCTGGTGCAGAAGAGAAACCCTCAAATCCCTGGCCTTTCGCGGAGACGCCTGGACGGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333538.10
CDS GCA 72 bp GGGAGAACGGAATCGCTCACATGGAAGTCCTCGCTCTaGAGAAGTGCTCCCCGAGACGCCTGCTCAGTCCAC +
Preference number: 6 (lower is better)
Translates to: GRTESLTWKSSL*RSAPRDACSVH
Trigger: GTGGACTGAGCAGGCGTCTCGGGGAGCACTTCTGCAGAGCGAGGACTTCCATGTGAGCGATTCCGTTCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333538.10
CDS CCA 72 bp GTCGGATTGGTGGTGGGGAGAACGGAATCGCTCACATaGAAGTCCTCGCTCTGCAGAAGTGCTCCCCGAGAC +
Preference number: 6 (lower is better)
Translates to: VGLVVGRTESLT*KSSLCRSAPRD
Trigger: GTCTCGGGGAGCACTTCTGCAGAGCGAGGACTTCCATGTGAGCGATTCCGTTCTCCCCACCACCAATCCGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333538.10
CDS CCA 72 bp GGTCCCCAGCCATGGCACGGATACAATATTGCTGTGTaGTTCTCCAGCGGCCCCTGGTCCAAGCAGACGTCT +
Preference number: 6 (lower is better)
Translates to: GPQPWHGYNIAV*FSSGPWSKQTS
Trigger: AGACGTCTGCTTGGACCAGGGGCCGCTGGAGAACCACACAGCAATATTGTATCCGTGCCATGGCTGGGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333538.10
ENST00000467723.1
ENST00000498380.6
ENST00000618959.1
CDS CCA 72 bp GGTCTGGAAGTTCAAGGCCAGCCCCAAGTCCACCTCTaGAATGTACCCTGCAGGCCTCGGCTGTGCAAACAG +
Preference number: 6 (lower is better)
Translates to: GLEVQGQPQVHL*NVPCRPRLCKQ
Trigger: CTGTTTGCACAGCCGAGGCCTGCAGGGTACATTCCAGAGGTGGACTTGGGGCTGGCCTTGAACTTCCAGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467723.1
CDS CAA 72 bp GGTTCTCCAGCGGCCCCTGGTCCAAGCAGACGTCTTTaGCCTTGTTGTTGCGAAGCTCCCCGTAAGCAACGG +
Preference number: 6 (lower is better)
Translates to: GSPAAPGPSRRL*PCCCEAPRKQR
Trigger: CCGTTGCTTACGGGGAGCTTCGCAACAACAAGGCAAAAGACGTCTGCTTGGACCAGGGGCCGCTGGAGAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333538.10
ENST00000467723.1
ENST00000498380.6
ENST00000618959.1
CDS CAA 90 bp TGTAGCGGGCAAGCTGTGGTCCCCAGCCATGGCACGGATACAATATaGCTGTGTGGTTCTCCAGCGGCCCCTGGTCCAAGCAGACGTCTT +
Preference number: 6 (lower is better)
Translates to: CSGQAVVPSHGTDTI*LCGSPAAPGPSRRL
Trigger: AAGACGTCTGCTTGGACCAGGGGCCGCTGGAGAACCACACAGCAATATTGTATCCGTGCCATGGCTGGGGACCACAGCTTGCCCGCTACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333538.10
ENST00000467723.1
ENST00000498380.6
ENST00000618959.1
CDS CAA 90 bp AGCACGAAGCCGGCTACCGCGATCAAGTTCAACACCAACAGCACTTaGACTCTTCTCAGTGAAGCCATCAAACAGCCCGGCCGGCCCTCG +
Preference number: 6 (lower is better)
Translates to: STKPATAIKFNTNST*TLLSEAIKQPGRPS
Trigger: CGAGGGCCGGCCGGGCTGTTTGATGGCTTCACTGAGAAGAGTCAAAGTGCTGTTGGTGTTGAACTTGATCGCGGTAGCCGGCTTCGTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333538.10
CDS CAA 90 bp ATGGCTCCATTCTGGATGAAGTTCCAGCGCTTGTACAGGCTGCTCTaGACCTTGTCGCAGTCCAGGAGCTGGGGCAGCCGACTCTTGGAG +
Preference number: 6 (lower is better)
Translates to: MAPFWMKFQRLYRLL*TLSQSRSWGSRLLE
Trigger: CTCCAAGAGTCGGCTGCCCCAGCTCCTGGACTGCGACAAGGTCAAGAGCAGCCTGTACAAGCGCTGGAACTTCATCCAGAATGGAGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333538.10
ENST00000467723.1
ENST00000498380.6
ENST00000618959.1
CDS TCA 72 bp CAAGTTCAACACCAACAGCACTTTGACTCTTCTCAGTaGAGCCATCAAACAGCCCGGCCGGCCCTCGCCCCG +
Preference number: 6 (lower is better)
Translates to: QVQHQQHFDSSQ*SHQTARPALAP
Trigger: CGGGGCGAGGGCCGGCCGGGCTGTTTGATGGCTTCACTGAGAAGAGTCAAAGTGCTGTTGGTGTTGAACTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333538.10
CDS GCA 72 bp AAGCTGTGGTCCCCAGCCATGGCACGGATACAATATTaGTGTGTGGTTCTCCAGCGGCCCCTGGTCCAAGCA +
Preference number: 6 (lower is better)
Translates to: KLWSPAMARIQY*CVVLQRPLVQA
Trigger: TGCTTGGACCAGGGGCCGCTGGAGAACCACACAGCAATATTGTATCCGTGCCATGGCTGGGGACCACAGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333538.10
ENST00000467723.1
ENST00000498380.6
ENST00000618959.1
CDS GCA 72 bp CAAGGCCAGCCCCAAGTCCACCTCTGGAATGTACCCTaGAGGCCTCGGCTGTGCAAACAGAAAGTCCTAGCT +
Preference number: 6 (lower is better)
Translates to: QGQPQVHLWNVP*RPRLCKQKVLA
Trigger: AGCTAGGACTTTCTGTTTGCACAGCCGAGGCCTGCAGGGTACATTCCAGAGGTGGACTTGGGGCTGGCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467723.1
CDS CAA 72 bp TTCTGGATGAAGTTCCAGCGCTTGTACAGGCTGCTCTaGACCTTGTCGCAGTCCAGGAGCTGGGGCAGCCGA +
Preference number: 6 (lower is better)
Translates to: FWMKFQRLYRLL*TLSQSRSWGSR
Trigger: TCGGCTGCCCCAGCTCCTGGACTGCGACAAGGTCAAGAGCAGCCTGTACAAGCGCTGGAACTTCATCCAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333538.10
ENST00000467723.1
ENST00000498380.6
ENST00000618959.1
CDS CAA 90 bp AGGCAGAGGCTGCAGAGAGCCGAGATCATGCCACTGTGTCCAGAGTaGGTTCCTTCCGGTGGGTTCGTGGTCTCGCTGACTTCAAGAATG +
Preference number: 6 (lower is better)
Translates to: RQRLQRAEIMPLCPE*VPSGGFVVSLTSRM
Trigger: CATTCTTGAAGTCAGCGAGACCACGAACCCACCGGAAGGAACCAACTCTGGACACAGTGGCATGATCTCGGCTCTCTGCAGCCTCTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498380.6
CDS TCA 72 bp CGGCTACCGCGATCAAGTTCAACACCAACAGCACTTTaGCTCTTCTCAGTGAAGCCATCAAACAGCCCGGCC +
Preference number: 6 (lower is better)
Translates to: RLPRSSSTPTAL*LFSVKPSNSPA
Trigger: GGCCGGGCTGTTTGATGGCTTCACTGAGAAGAGTCAAAGTGCTGTTGGTGTTGAACTTGATCGCGGTAGCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333538.10
CDS TCA 72 bp TCCCTCTACTTGATGGAGTTCTTAATGGTCCACCTCTaGCCTGTGCAGCTGCGGAGGATGAGGTCGATGCCA +
Preference number: 6 (lower is better)
Translates to: SLYLMEFLMVHL*PVQLRRMRSMP
Trigger: TGGCATCGACCTCATCCTCCGCAGCTGCACAGGTCAGAGGTGGACCATTAAGAACTCCATCAAGTAGAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333538.10
ENST00000467723.1
ENST00000498380.6
ENST00000618959.1
CDS CAA 72 bp CCGGCTACCGCGATCAAGTTCAACACCAACAGCACTTaGACTCTTCTCAGTGAAGCCATCAAACAGCCCGGC +
Preference number: 6 (lower is better)
Translates to: PATAIKFNTNST*TLLSEAIKQPG
Trigger: GCCGGGCTGTTTGATGGCTTCACTGAGAAGAGTCAAAGTGCTGTTGGTGTTGAACTTGATCGCGGTAGCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333538.10
CDS CCA 72 bp GGATACAATATTGCTGTGTGGTTCTCCAGCGGCCCCTaGTCCAAGCAGACGTCTTTTGCCTTGTTGTTGCGA +
Preference number: 6 (lower is better)
Translates to: GYNIAVWFSSGP*SKQTSFALLLR
Trigger: TCGCAACAACAAGGCAAAAGACGTCTGCTTGGACCAGGGGCCGCTGGAGAACCACACAGCAATATTGTATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333538.10
ENST00000467723.1
ENST00000498380.6
ENST00000618959.1
CDS GCA 72 bp CCTTCAATGAGCCCAAGGGATTTGGATAAGCAGTTCTaGAGGGCTGGGAGGCCTCAGGAAACTTACAATCAT +
Preference number: 6 (lower is better)
Translates to: PSMSPRDLDKQF*RAGRPQETYNH
Trigger: ATGATTGTAAGTTTCCTGAGGCCTCCCAGCCCTGCAGAACTGCTTATCCAAATCCCTTGGGCTCATTGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498380.6
CDS GCA 72 bp CGCGAAGAGCATTCCTCTTGGTGTAGAAGCCAATGTTaGTATTATATGGCTTCTTCTTCCGCTCAATGTGGG +
Preference number: 6 (lower is better)
Translates to: REEHSSWCRSQC*YYMASSSAQCG
Trigger: CCCACATTGAGCGGAAGAAGAAGCCATATAATAGCAACATTGGCTTCTACACCAAGAGGAATGCTCTTCGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333538.10
ENST00000467723.1
ENST00000498380.6
ENST00000618959.1
CDS CCA 72 bp CCATCCAGACCTCAGCAACGCGAAGAGCATTCCTCTTaGTGTAGAAGCCAATGTTGCTATTATATGGCTTCT +
Preference number: 6 (lower is better)
Translates to: PSRPQQREEHSS*CRSQCCYYMAS
Trigger: AGAAGCCATATAATAGCAACATTGGCTTCTACACCAAGAGGAATGCTCTTCGCGTTGCTGAGGTCTGGATGG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333538.10
ENST00000467723.1
ENST00000498380.6
ENST00000618959.1
CDS GCA 72 bp TTCCCAGTTCAATATTTTCTCCTCCGTATACATCCATaGCAGGATCCAGAAGACCAATTTCACCGAAGAACT +
Preference number: 6 (lower is better)
Translates to: FPVQYFLLRIHP*QDPEDQFHRRT
Trigger: AGTTCTTCGGTGAAATTGGTCTTCTGGATCCTGGCATGGATGTATACGGAGGAGAAAATATTGAACTGGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333538.10
ENST00000467723.1
ENST00000498380.6
ENST00000618959.1