RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GALNT16 (Homo sapiens)

Ensembl gene IDs: ENSG00000100626

Ensembl transcript IDs: ENST00000337827.8, ENST00000448469.8, ENST00000553471.6, ENST00000553669.1, ENST00000553740.1, ENST00000554317.5, ENST00000554858.1, ENST00000555920.5, ENST00000556677.1, ENST00000556829.1

Found 950 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ATGGCCCTGGGAGCGAAGGGGCCTGCGCTGGCAAGTCCAGAGGGGTaGACTTGGGCACGGGAGTGCTGCCGAGAGGACGCTGGTGAGAGT +
Preference number: 1 (lower is better)
Translates to: MALGAKGPALASPEG*TWARECCREDAGES
Trigger: ACTCTCACCAGCGTCCTCTCGGCAGCACTCCCGTGCCCAAGTGCACCCCTCTGGACTTGCCAGCGCAGGCCCCTTCGCTCCCAGGGCCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
3UTR CCA 90 bp CTGGGAGCGAAGGGGCCTGCGCTGGCAAGTCCAGAGGGGTGCACTTaGGCACGGGAGTGCTGCCGAGAGGACGCTGGTGAGAGTCAGGAG +
Preference number: 1 (lower is better)
Translates to: LGAKGPALASPEGCT*ARECCREDAGESQE
Trigger: CTCCTGACTCTCACCAGCGTCCTCTCGGCAGCACTCCCGTGCCCAAGTGCACCCCTCTGGACTTGCCAGCGCAGGCCCCTTCGCTCCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
3UTR CCA 90 bp CAGAGGACAGGCAAAGCATGGCCCTGGGAGCGAAGGGGCCTGCGCTaGCAAGTCCAGAGGGGTGCACTTGGGCACGGGAGTGCTGCCGAG +
Preference number: 1 (lower is better)
Translates to: QRTGKAWPWERRGLR*QVQRGALGHGSAAE
Trigger: CTCGGCAGCACTCCCGTGCCCAAGTGCACCCCTCTGGACTTGCCAGCGCAGGCCCCTTCGCTCCCAGGGCCATGCTTTGCCTGTCCTCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
3UTR GCA 90 bp GGGCCTGCGCTGGCAAGTCCAGAGGGGTGCACTTGGGCACGGGAGTaGTGCCGAGAGGACGCTGGTGAGAGTCAGGAGGCGAAACTGCTG +
Preference number: 1 (lower is better)
Translates to: GPALASPEGCTWARE*CREDAGESQEAKLL
Trigger: CAGCAGTTTCGCCTCCTGACTCTCACCAGCGTCCTCTCGGCAGCACTCCCGTGCCCAAGTGCACCCCTCTGGACTTGCCAGCGCAGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
3UTR GCA 90 bp GTGGCAGGCACAGGGAGGGCTTCTGAGGAGGGTGAGCAGGGGAAGTaGTGGAGCAGCCTCTGGGCCTTGGGTCCCATTCCCTGGGTGGTG +
Preference number: 1 (lower is better)
Translates to: VAGTGRASEEGEQGK*WSSLWALGPIPWVV
Trigger: CACCACCCAGGGAATGGGACCCAAGGCCCAGAGGCTGCTCCAGCACTTCCCCTGCTCACCCTCCTCAGAAGCCCTCCCTGTGCCTGCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR GCA 90 bp GGCGTGGGCTCAAGGATTTGCCCTCAGAGAGGTGGGTGCTCTAGGTaGAGGAGACACTGCACCAGCCCCACTGCAGGGCAGGGCCGAGGG +
Preference number: 1 (lower is better)
Translates to: GVGSRICPQRGGCSR*RRHCTSPTAGQGRG
Trigger: CCCTCGGCCCTGCCCTGCAGTGGGGCTGGTGCAGTGTCTCCTGCACCTAGAGCACCCACCTCTCTGAGGGCAAATCCTTGAGCCCACGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR GCA 90 bp ACACAGGGTGGAAGGCAGGGGCGGAGCCTGGGCTCCCAGTGGGAATaGAAGGACGTGATGGGTAGGGCTGAGACCCAGCCTCTCTGGGCC +
Preference number: 1 (lower is better)
Translates to: TQGGRQGRSLGSQWE*KDVMGRAETQPLWA
Trigger: GGCCCAGAGAGGCTGGGTCTCAGCCCTACCCATCACGTCCTTGCATTCCCACTGGGAGCCCAGGCTCCGCCCCTGCCTTCCACCCTGTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR GCA 90 bp CCTGCGCTGGCAAGTCCAGAGGGGTGCACTTGGGCACGGGAGTGCTaGCGAGAGGACGCTGGTGAGAGTCAGGAGGCGAAACTGCTGGAG +
Preference number: 1 (lower is better)
Translates to: PALASPEGCTWAREC*REDAGESQEAKLLE
Trigger: CTCCAGCAGTTTCGCCTCCTGACTCTCACCAGCGTCCTCTCGGCAGCACTCCCGTGCCCAAGTGCACCCCTCTGGACTTGCCAGCGCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
3UTR GCA 90 bp GAGGGGGTGGGCGTGGGCTCAAGGATTTGCCCTCAGAGAGGTGGGTaGTCTAGGTGCAGGAGACACTGCACCAGCCCCACTGCAGGGCAG +
Preference number: 1 (lower is better)
Translates to: EGVGVGSRICPQRGG*SRCRRHCTSPTAGQ
Trigger: CTGCCCTGCAGTGGGGCTGGTGCAGTGTCTCCTGCACCTAGAGCACCCACCTCTCTGAGGGCAAATCCTTGAGCCCACGCCCACCCCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR CCA 90 bp AGGGCTTCTGAGGAGGGTGAGCAGGGGAAGTGCTGGAGCAGCCTCTaGGCCTTGGGTCCCATTCCCTGGGTGGTGAGGGAGCCCTCCAAG +
Preference number: 1 (lower is better)
Translates to: RASEEGEQGKCWSSL*ALGPIPWVVREPSK
Trigger: CTTGGAGGGCTCCCTCACCACCCAGGGAATGGGACCCAAGGCCCAGAGGCTGCTCCAGCACTTCCCCTGCTCACCCTCCTCAGAAGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR TCA 90 bp AGAGGGGTGCACTTGGGCACGGGAGTGCTGCCGAGAGGACGCTGGTaGGAGTCAGGAGGCGAAACTGCTGGAGAGCCCTCCAGAGCAGGT +
Preference number: 1 (lower is better)
Translates to: RGVHLGTGVLPRGRW*ESGGETAGEPSRAG
Trigger: ACCTGCTCTGGAGGGCTCTCCAGCAGTTTCGCCTCCTGACTCTCACCAGCGTCCTCTCGGCAGCACTCCCGTGCCCAAGTGCACCCCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
3UTR TCA 90 bp CCAGGGGCACCTACTCAGTCTCTACCCAGCAACAGTCCAGCACCCTaGCCATCTCCTCTCCCGGGGCAAGGCCAGGACAGCACTGAGGGC +
Preference number: 1 (lower is better)
Translates to: PGAPTQSLPSNSPAP*PSPLPGQGQDSTEG
Trigger: GCCCTCAGTGCTGTCCTGGCCTTGCCCCGGGAGAGGAGATGGTCAGGGTGCTGGACTGTTGCTGGGTAGAGACTGAGTAGGTGCCCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448469.8
3UTR CCA 90 bp AGTGCTGCCGAGAGGACGCTGGTGAGAGTCAGGAGGCGAAACTGCTaGAGAGCCCTCCAGAGCAGGTGCTGCGGACCACAGACACTTGGC +
Preference number: 1 (lower is better)
Translates to: SAAERTLVRVRRRNC*RALQSRCCGPQTLG
Trigger: GCCAAGTGTCTGTGGTCCGCAGCACCTGCTCTGGAGGGCTCTCCAGCAGTTTCGCCTCCTGACTCTCACCAGCGTCCTCTCGGCAGCACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
3UTR CCA 90 bp CCACAGGAGCCTGGGCTCCACCTGACCTGTGCTGATTCCTGGTTTTaGTCCAAGGCCTGCCCTTGCAGTAGGGCCACCTGTTGGCCCCCA +
Preference number: 1 (lower is better)
Translates to: PQEPGLHLTCADSWF*SKACPCSRATCWPP
Trigger: TGGGGGCCAACAGGTGGCCCTACTGCAAGGGCAGGCCTTGGACCAAAACCAGGAATCAGCACAGGTCAGGTGGAGCCCAGGCTCCTGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337827.8
3UTR GCA 90 bp GGGCTCCACCTGACCTGTGCTGATTCCTGGTTTTGGTCCAAGGCCTaGCCTTGCAGTAGGGCCACCTGTTGGCCCCCACCAGAGCAGTCA +
Preference number: 1 (lower is better)
Translates to: GLHLTCADSWFWSKA*PCSRATCWPPPEQS
Trigger: TGACTGCTCTGGTGGGGGCCAACAGGTGGCCCTACTGCAAGGGCAGGCCTTGGACCAAAACCAGGAATCAGCACAGGTCAGGTGGAGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337827.8
3UTR CCA 90 bp GCTGCGGAAGAAACATCACGACAGAGGACAGGCAAAGCATGGCCCTaGGAGCGAAGGGGCCTGCGCTGGCAAGTCCAGAGGGGTGCACTT +
Preference number: 1 (lower is better)
Translates to: AAEETSRQRTGKAWP*ERRGLRWQVQRGAL
Trigger: AAGTGCACCCCTCTGGACTTGCCAGCGCAGGCCCCTTCGCTCCCAGGGCCATGCTTTGCCTGTCCTCTGTCGTGATGTTTCTTCCGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
3UTR CCA 90 bp CAGAGCCCTCCAAGGCTGAGGGTGAAAATAGATGGAGAGTGGAAATaGGGCTCAGCGCGCCAGGAGGGAGCCCTGAGTAGGCGGTGGGTG +
Preference number: 1 (lower is better)
Translates to: QSPPRLRVKIDGEWK*GSARQEGALSRRWV
Trigger: CACCCACCGCCTACTCAGGGCTCCCTCCTGGCGCGCTGAGCCCCATTTCCACTCTCCATCTATTTTCACCCTCAGCCTTGGAGGGCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337827.8
3UTR CCA 90 bp CACAGAGGCCCAGGGATCCTCAGGAACAGCTCCCTGCTGTACAAATaGGAGTCTGGCCCTGGTGCAGAAGTCCCTTCTGCTGCCCTGCCC +
Preference number: 1 (lower is better)
Translates to: HRGPGILRNSSLLYK*ESGPGAEVPSAALP
Trigger: GGGCAGGGCAGCAGAAGGGACTTCTGCACCAGGGCCAGACTCCCATTTGTACAGCAGGGAGCTGTTCCTGAGGATCCCTGGGCCTCTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337827.8
3UTR GCA 90 bp CCTCAGGAACAGCTCCCTGCTGTACAAATGGGAGTCTGGCCCTGGTaGAGAAGTCCCTTCTGCTGCCCTGCCCATAGGCTTTCGGGGGAC +
Preference number: 1 (lower is better)
Translates to: PQEQLPAVQMGVWPW*RSPFCCPAHRLSGD
Trigger: GTCCCCCGAAAGCCTATGGGCAGGGCAGCAGAAGGGACTTCTGCACCAGGGCCAGACTCCCATTTGTACAGCAGGGAGCTGTTCCTGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337827.8
3UTR GCA 90 bp GGAAAACCATGCAGGCCAAATCAGAGACCCAGGCACCCTCCTCACTaGTTGCACCGACTGAGGCAGGCTAGCCAGTGGCAGGCACAGGGA +
Preference number: 1 (lower is better)
Translates to: GKPCRPNQRPRHPPH*LHRLRQASQWQAQG
Trigger: TCCCTGTGCCTGCCACTGGCTAGCCTGCCTCAGTCGGTGCAAGCAGTGAGGAGGGTGCCTGGGTCTCTGATTTGGCCTGCATGGTTTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR CCA 90 bp GCACGCCAGGGAGGAAGATTAGGGGGTGGCAGCTTGGGCAGACAGTaGCTTCAATCCAGAGCAGAGGTTCAGGCCCTTTGGGGATCAGGG +
Preference number: 1 (lower is better)
Translates to: ARQGGRLGGGSLGRQ*LQSRAEVQALWGSG
Trigger: CCCTGATCCCCAAAGGGCCTGAACCTCTGCTCTGGATTGAAGCCACTGTCTGCCCAAGCTGCCACCCCCTAATCTTCCTCCCTGGCGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
3UTR CCA 90 bp ATGAGGCCACAGGAGCCTGGGCTCCACCTGACCTGTGCTGATTCCTaGTTTTGGTCCAAGGCCTGCCCTTGCAGTAGGGCCACCTGTTGG +
Preference number: 1 (lower is better)
Translates to: MRPQEPGLHLTCADS*FWSKACPCSRATCW
Trigger: CCAACAGGTGGCCCTACTGCAAGGGCAGGCCTTGGACCAAAACCAGGAATCAGCACAGGTCAGGTGGAGCCCAGGCTCCTGTGGCCTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337827.8
3UTR CCA 90 bp CAGCTCCGAGGGGACAGGCCTGGCTCACAGGGAAGGAGAGAGGGCTaGCTAAAGGCAAGCACGGCGGCAGGGCAATACCTATTTGGAGAA +
Preference number: 1 (lower is better)
Translates to: QLRGDRPGSQGRREG*LKASTAAGQYLFGE
Trigger: TTCTCCAAATAGGTATTGCCCTGCCGCCGTGCTTGCCTTTAGCCAGCCCTCTCTCCTTCCCTGTGAGCCAGGCCTGTCCCCTCGGAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337827.8
3UTR CCA 90 bp AAGCACCAGAGCCCTCCAAGGCTGAGGGTGAAAATAGATGGAGAGTaGAAATGGGGCTCAGCGCGCCAGGAGGGAGCCCTGAGTAGGCGG +
Preference number: 1 (lower is better)
Translates to: KHQSPPRLRVKIDGE*KWGSARQEGALSRR
Trigger: CCGCCTACTCAGGGCTCCCTCCTGGCGCGCTGAGCCCCATTTCCACTCTCCATCTATTTTCACCCTCAGCCTTGGAGGGCTCTGGTGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337827.8
3UTR CCA 90 bp TCCAGAAGGCATTGGCAGTGGGATAGCTGGCTCATCCTGTCCTCCTaGGAGAAGAGGGGCACAGGCACCCAGAATGCCATCGGGAGCCTG +
Preference number: 1 (lower is better)
Translates to: SRRHWQWDSWLILSS*EKRGTGTQNAIGSL
Trigger: CAGGCTCCCGATGGCATTCTGGGTGCCTGTGCCCCTCTTCTCCCAGGAGGACAGGATGAGCCAGCTATCCCACTGCCAATGCCTTCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR CCA 90 bp AAGAAGGACGGCCCGGATTCCAGAAGGCATTGGCAGTGGGATAGCTaGCTCATCCTGTCCTCCTGGGAGAAGAGGGGCACAGGCACCCAG +
Preference number: 1 (lower is better)
Translates to: KKDGPDSRRHWQWDS*LILSSWEKRGTGTQ
Trigger: CTGGGTGCCTGTGCCCCTCTTCTCCCAGGAGGACAGGATGAGCCAGCTATCCCACTGCCAATGCCTTCTGGAATCCGGGCCGTCCTTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR TCA 90 bp GAGGGAAGACTGAGCTGGGGCCTGCTGACTCCATCACACCAGGTCTaGGGCACAGGAGCCTCTCGGATACAGGAAACCCAGCTAGCCTTG +
Preference number: 1 (lower is better)
Translates to: EGRLSWGLLTPSHQV*GTGASRIQETQLAL
Trigger: CAAGGCTAGCTGGGTTTCCTGTATCCGAGAGGCTCCTGTGCCTCAGACCTGGTGTGATGGAGTCAGCAGGCCCCAGCTCAGTCTTCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR GCA 90 bp CACCTGACCTGTGCTGATTCCTGGTTTTGGTCCAAGGCCTGCCCTTaGAGTAGGGCCACCTGTTGGCCCCCACCAGAGCAGTCAGGAGTT +
Preference number: 1 (lower is better)
Translates to: HLTCADSWFWSKACP*SRATCWPPPEQSGV
Trigger: AACTCCTGACTGCTCTGGTGGGGGCCAACAGGTGGCCCTACTGCAAGGGCAGGCCTTGGACCAAAACCAGGAATCAGCACAGGTCAGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337827.8
3UTR GCA 90 bp GCTGTACAAATGGGAGTCTGGCCCTGGTGCAGAAGTCCCTTCTGCTaGCCTGCCCATAGGCTTTCGGGGGACTCTCCTGCCAGTGACGTA +
Preference number: 1 (lower is better)
Translates to: AVQMGVWPWCRSPFC*PAHRLSGDSPASDV
Trigger: TACGTCACTGGCAGGAGAGTCCCCCGAAAGCCTATGGGCAGGGCAGCAGAAGGGACTTCTGCACCAGGGCCAGACTCCCATTTGTACAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337827.8
3UTR GCA 90 bp GAGATAATTCCTCAGTGGGAGGGGGTGGGCGTGGGCTCAAGGATTTaGCCTCAGAGAGGTGGGTGCTCTAGGTGCAGGAGACACTGCACC +
Preference number: 1 (lower is better)
Translates to: EIIPQWEGVGVGSRI*PQRGGCSRCRRHCT
Trigger: GGTGCAGTGTCTCCTGCACCTAGAGCACCCACCTCTCTGAGGGCAAATCCTTGAGCCCACGCCCACCCCCTCCCACTGAGGAATTATCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR CCA 90 bp GATCCTCAGGAACAGCTCCCTGCTGTACAAATGGGAGTCTGGCCCTaGTGCAGAAGTCCCTTCTGCTGCCCTGCCCATAGGCTTTCGGGG +
Preference number: 1 (lower is better)
Translates to: DPQEQLPAVQMGVWP*CRSPFCCPAHRLSG
Trigger: CCCCGAAAGCCTATGGGCAGGGCAGCAGAAGGGACTTCTGCACCAGGGCCAGACTCCCATTTGTACAGCAGGGAGCTGTTCCTGAGGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337827.8
3UTR CCA 90 bp AGGACCACACCCCATGCAGTGCTGGGAGACATCCCCCGCAGGCCTTaGGGTGCTGGAACCCTGGGACGACAGTCATATTGTCCAGGTTAT +
Preference number: 1 (lower is better)
Translates to: RTTPHAVLGDIPRRP*GAGTLGRQSYCPGY
Trigger: ATAACCTGGACAATATGACTGTCGTCCCAGGGTTCCAGCACCCCAAGGCCTGCGGGGGATGTCTCCCAGCACTGCATGGGGTGTGGTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337827.8
3UTR CCA 90 bp TGCCTGCCTGCACAGCTGGGCCTCATGACCCAAAAGACCCCTGTGTaGGCTTCTGTCCTTGCTTTCTCCGGGCAACAAGGGAGAGACCAC +
Preference number: 1 (lower is better)
Translates to: CLPAQLGLMTQKTPV*ASVLAFSGQQGRDH
Trigger: GTGGTCTCTCCCTTGTTGCCCGGAGAAAGCAAGGACAGAAGCCCACACAGGGGTCTTTTGGGTCATGAGGCCCAGCTGTGCAGGCAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448469.8
3UTR CCA 90 bp AGAATGCCATCGGGAGCCTGGCAGGACTTGCAGGGGCAGAATGAATaGGGCCAAGGAGATACCTACACACCCCGTAGGCTGGGTCAGCAC +
Preference number: 1 (lower is better)
Translates to: RMPSGAWQDLQGQNE*GQGDTYTPRRLGQH
Trigger: GTGCTGACCCAGCCTACGGGGTGTGTAGGTATCTCCTTGGCCCCATTCATTCTGCCCCTGCAAGTCCTGCCAGGCTCCCGATGGCATTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR GCA 90 bp CAGGAGGCTTCCCAGATGAACAGGGGATCTGAGGCTGCACCTGGCTaGGGAAGAAACATCACGACAGAGGACAGGCAAAGCATGGCCCTG +
Preference number: 1 (lower is better)
Translates to: QEASQMNRGSEAAPG*GRNITTEDRQSMAL
Trigger: CAGGGCCATGCTTTGCCTGTCCTCTGTCGTGATGTTTCTTCCGCAGCCAGGTGCAGCCTCAGATCCCCTGTTCATCTGGGAAGCCTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
3UTR CCA 90 bp GCAGGCGATGGCAGTTTGAGCACGCCAGGGAGGAAGATTAGGGGGTaGCAGCTTGGGCAGACAGTGGCTTCAATCCAGAGCAGAGGTTCA +
Preference number: 1 (lower is better)
Translates to: AGDGSLSTPGRKIRG*QLGQTVASIQSRGS
Trigger: TGAACCTCTGCTCTGGATTGAAGCCACTGTCTGCCCAAGCTGCCACCCCCTAATCTTCCTCCCTGGCGTGCTCAAACTGCCATCGCCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
3UTR CCA 90 bp CCTCATGTAGGCCAAACCTCCAGCAATGCCCAGCTGGAGAGAGTATaGCCATCCTCACCCCAGGGAGTCGTGGTGCTTGGAGCTACCTCA +
Preference number: 1 (lower is better)
Translates to: PHVGQTSSNAQLERV*PSSPQGVVVLGATS
Trigger: TGAGGTAGCTCCAAGCACCACGACTCCCTGGGGTGAGGATGGCCATACTCTCTCCAGCTGGGCATTGCTGGAGGTTTGGCCTACATGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR GCA 90 bp CTTCTGACCTGTGAGGCCAGTAATCTACACCCCCTAGTGGGAAGCTaGCTTCTTTGTAGGGATGAAGTGTGGGGCCAGCAGGGTGGTGGG +
Preference number: 1 (lower is better)
Translates to: LLTCEASNLHPLVGS*LLCRDEVWGQQGGG
Trigger: CCCACCACCCTGCTGGCCCCACACTTCATCCCTACAAAGAAGGCAGCTTCCCACTAGGGGGTGTAGATTACTGGCCTCACAGGTCAGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR CCA 90 bp CAGTGCTGGGAGACATCCCCCGCAGGCCTTGGGGTGCTGGAACCCTaGGACGACAGTCATATTGTCCAGGTTATTTCTCCCAACTGCAGA +
Preference number: 1 (lower is better)
Translates to: QCWETSPAGLGVLEP*DDSHIVQVISPNCR
Trigger: TCTGCAGTTGGGAGAAATAACCTGGACAATATGACTGTCGTCCCAGGGTTCCAGCACCCCAAGGCCTGCGGGGGATGTCTCCCAGCACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337827.8
3UTR CCA 90 bp GACTACTCAGGGATGTGTGTGGCTACCCGTCCTTTCAGTGGGTCCTaGCGGCAGGGACAGGGCACTAGCTGTTCATTAATGCCCGAGAGA +
Preference number: 1 (lower is better)
Translates to: DYSGMCVATRPFSGS*RQGQGTSCSLMPER
Trigger: TCTCTCGGGCATTAATGAACAGCTAGTGCCCTGTCCCTGCCGCCAGGACCCACTGAAAGGACGGGTAGCCACACACATCCCTGAGTAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448469.8
3UTR TCA 90 bp ACAGGGCTGCGTTGCCACAAAGGACCGGCTGATAAGTGCAGAGCCTaGTCTGACCACAGCAAAGGACAGAGAGACCCTCTTGAAGGCCCT +
Preference number: 1 (lower is better)
Translates to: TGLRCHKGPADKCRA*SDHSKGQRDPLEGP
Trigger: AGGGCCTTCAAGAGGGTCTCTCTGTCCTTTGCTGTGGTCAGATCAGGCTCTGCACTTATCAGCCGGTCCTTTGTGGCAACGCAGCCCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
3UTR GCA 90 bp CCTGGGGCACCACAGGGCATGGAGGCCGACGAGCAAGCTACCAGGTaGAGGACAGGGCTAGACTTGAGCATGTTCAGTTTCACTTTTACA +
Preference number: 1 (lower is better)
Translates to: PGAPQGMEADEQATR*RTGLDLSMFSFTFT
Trigger: TGTAAAAGTGAAACTGAACATGCTCAAGTCTAGCCCTGTCCTGCACCTGGTAGCTTGCTCGTCGGCCTCCATGCCCTGTGGTGCCCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337827.8
3UTR GCA 90 bp GCTGGGCCTCATGACCCAAAAGACCCCTGTGTGGGCTTCTGTCCTTaGTTTCTCCGGGCAACAAGGGAGAGACCACACACTATTGTCCCA +
Preference number: 1 (lower is better)
Translates to: AGPHDPKDPCVGFCP*FLRATRERPHTIVP
Trigger: TGGGACAATAGTGTGTGGTCTCTCCCTTGTTGCCCGGAGAAAGCAAGGACAGAAGCCCACACAGGGGTCTTTTGGGTCATGAGGCCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448469.8
3UTR CCA 90 bp TCATGGTGGGTATTTGCTGATGGTCCTGGCAGAAATGTGAGGAGATaGGAACAGCCCACTTTGCACTCCCCCACCCTAACCCCCTTCCGG +
Preference number: 1 (lower is better)
Translates to: SWWVFADGPGRNVRR*EQPTLHSPTLTPFR
Trigger: CCGGAAGGGGGTTAGGGTGGGGGAGTGCAAAGTGGGCTGTTCCCATCTCCTCACATTTCTGCCAGGACCATCAGCAAATACCCACCATGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000448469.8
3UTR CCA 90 bp GAAGCAGGGTGTGGGGATAGCAGGAGCAGTTCCAAGACAAGGCCGTaGGGTAGATGTGTGGATGTGTTCTCAGCGGCTGTGAAAAGGAAC +
Preference number: 1 (lower is better)
Translates to: EAGCGDSRSSSKTRP*GRCVDVFSAAVKRN
Trigger: GTTCCTTTTCACAGCCGCTGAGAACACATCCACACATCTACCCCACGGCCTTGTCTTGGAACTGCTCCTGCTATCCCCACACCCTGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
3UTR CCA 90 bp GCCCGCCTGCGCCCTCCTAGAACAAGCTTTGGAGAACGTGTGTCATaGTGGGTATTTGCTGATGGTCCTGGCAGAAATGTGAGGAGATGG +
Preference number: 1 (lower is better)
Translates to: ARLRPPRTSFGERVS*WVFADGPGRNVRRW
Trigger: CCATCTCCTCACATTTCTGCCAGGACCATCAGCAAATACCCACCATGACACACGTTCTCCAAAGCTTGTTCTAGGAGGGCGCAGGCGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448469.8
3UTR GCA 90 bp CCCAGCTGGAGAGAGTATGGCCATCCTCACCCCAGGGAGTCGTGGTaGTTGGAGCTACCTCAGCATCTAGCCTTCTGTAATATAGTGTCT +
Preference number: 1 (lower is better)
Translates to: PSWREYGHPHPRESW*LELPQHLAFCNIVS
Trigger: AGACACTATATTACAGAAGGCTAGATGCTGAGGTAGCTCCAAGCACCACGACTCCCTGGGGTGAGGATGGCCATACTCTCTCCAGCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR CCA 90 bp TGGGGTAGATGTGTGGATGTGTTCTCAGCGGCTGTGAAAAGGAACTaGGAGTTCTCTTCACAAACAGGAGCCACAGCCAGCCTCCCAGCA +
Preference number: 1 (lower is better)
Translates to: WGRCVDVFSAAVKRN*EFSSQTGATASLPA
Trigger: TGCTGGGAGGCTGGCTGTGGCTCCTGTTTGTGAAGAGAACTCCCAGTTCCTTTTCACAGCCGCTGAGAACACATCCACACATCTACCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
3UTR CCA 90 bp AGACCTCTTCCCATTAGAGAAGCTGGCTGGGTTGCCCCCTCCTTCTaGAGGAGCACTGACTCAGACCATCACAGGGACACACAAATACCA +
Preference number: 1 (lower is better)
Translates to: RPLPIREAGWVAPSF*RSTDSDHHRDTQIP
Trigger: TGGTATTTGTGTGTCCCTGTGATGGTCTGAGTCAGTGCTCCTCCAGAAGGAGGGGGCAACCCAGCCAGCTTCTCTAATGGGAAGAGGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337827.8
3UTR CCA 90 bp CTCCCAGGATTAGTGGTGACAGTGTGGGTGAGAGTGTCGGATCAATaGAAAAAGCAGTGCTCACGTGAGGCTGGTCATGCCAGCTTGGAC +
Preference number: 1 (lower is better)
Translates to: LPGLVVTVWVRVSDQ*KKQCSREAGHASLD
Trigger: GTCCAAGCTGGCATGACCAGCCTCACGTGAGCACTGCTTTTTCCATTGATCCGACACTCTCACCCACACTGTCACCACTAATCCTGGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR CCA 90 bp ATGCCCAGCTGGAGAGAGTATGGCCATCCTCACCCCAGGGAGTCGTaGTGCTTGGAGCTACCTCAGCATCTAGCCTTCTGTAATATAGTG +
Preference number: 1 (lower is better)
Translates to: MPSWREYGHPHPRES*CLELPQHLAFCNIV
Trigger: CACTATATTACAGAAGGCTAGATGCTGAGGTAGCTCCAAGCACCACGACTCCCTGGGGTGAGGATGGCCATACTCTCTCCAGCTGGGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR TCA 90 bp AGACAAGGCCGTGGGGTAGATGTGTGGATGTGTTCTCAGCGGCTGTaGAAAGGAACTGGGAGTTCTCTTCACAAACAGGAGCCACAGCCA +
Preference number: 1 (lower is better)
Translates to: RQGRGVDVWMCSQRL*KGTGSSLHKQEPQP
Trigger: TGGCTGTGGCTCCTGTTTGTGAAGAGAACTCCCAGTTCCTTTTCACAGCCGCTGAGAACACATCCACACATCTACCCCACGGCCTTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
3UTR TCA 90 bp TCACAAACAGGAGCCACAGCCAGCCTCCCAGCACAGTGCAATAGCTaGCCCTTCAAGAAAATCCCTCCTGTAGTAGGGAGGGGAATAAGG +
Preference number: 1 (lower is better)
Translates to: SQTGATASLPAQCNS*PFKKIPPVVGRGIR
Trigger: CCTTATTCCCCTCCCTACTACAGGAGGGATTTTCTTGAAGGGTCAGCTATTGCACTGTGCTGGGAGGCTGGCTGTGGCTCCTGTTTGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448469.8
3UTR TCA 90 bp AGTGTGGGTGAGAGTGTCGGATCAATGGAAAAAGCAGTGCTCACGTaGGGCTGGTCATGCCAGCTTGGACATCACTGTGTCTGGAGCTCA +
Preference number: 1 (lower is better)
Translates to: SVGESVGSMEKAVLT*GWSCQLGHHCVWSS
Trigger: TGAGCTCCAGACACAGTGATGTCCAAGCTGGCATGACCAGCCTCACGTGAGCACTGCTTTTTCCATTGATCCGACACTCTCACCCACACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR GCA 90 bp GTGGTGACAGTGTGGGTGAGAGTGTCGGATCAATGGAAAAAGCAGTaGTCACGTGAGGCTGGTCATGCCAGCTTGGACATCACTGTGTCT +
Preference number: 1 (lower is better)
Translates to: VVTVWVRVSDQWKKQ*SREAGHASLDITVS
Trigger: AGACACAGTGATGTCCAAGCTGGCATGACCAGCCTCACGTGAGCACTGCTTTTTCCATTGATCCGACACTCTCACCCACACTGTCACCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR GCA 90 bp GCCTCTAACACCAGCTTTAAGCCCTGCCCTTCCCAGCAGGGCTCTTaGTTTTCTGTAGTTTGCAGAAGTTCCTGTCCAGATCAGAGGAGG +
Preference number: 1 (lower is better)
Translates to: ASNTSFKPCPSQQGS*FSVVCRSSCPDQRR
Trigger: CCTCCTCTGATCTGGACAGGAACTTCTGCAAACTACAGAAAAGCAAGAGCCCTGCTGGGAAGGGCAGGGCTTAAAGCTGGTGTTAGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR GCA 90 bp CATGCCCCTCATTTAAATCAGGCTGTGTGTTCCTATGTAAGAGGCTaGCCCCATCCTGCCTCTAACACCAGCTTTAAGCCCTGCCCTTCC +
Preference number: 1 (lower is better)
Translates to: HAPHLNQAVCSYVRG*PHPASNTSFKPCPS
Trigger: GGAAGGGCAGGGCTTAAAGCTGGTGTTAGAGGCAGGATGGGGGCAGCCTCTTACATAGGAACACACAGCCTGATTTAAATGAGGGGCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR CCA 90 bp CGCCTGCGCCCTCCTAGAACAAGCTTTGGAGAACGTGTGTCATGGTaGGTATTTGCTGATGGTCCTGGCAGAAATGTGAGGAGATGGGAA +
Preference number: 1 (lower is better)
Translates to: RLRPPRTSFGERVSW*VFADGPGRNVRRWE
Trigger: TTCCCATCTCCTCACATTTCTGCCAGGACCATCAGCAAATACCCACCATGACACACGTTCTCCAAAGCTTGTTCTAGGAGGGCGCAGGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448469.8
3UTR CCA 90 bp TCTGAGAAACAATGTCACATCACCCACTGTCCCATCTCCACATCTTaGTTCTTGCGGATTCCTTGTGAGGTAAGCAGGGGAGGGAGCCCC +
Preference number: 1 (lower is better)
Translates to: SEKQCHITHCPISTS*FLRIPCEVSRGGSP
Trigger: GGGGCTCCCTCCCCTGCTTACCTCACAAGGAATCCGCAAGAACCAAGATGTGGAGATGGGACAGTGGGTGATGTGACATTGTTTCTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR TCA 90 bp CCTCTAGAATCCATGAACTCTATGGGTATGTGGATCCTTGGCCTATaGAAGACAGGGGGCTCCTGTGGTAGGTATATCTGCCCCAGGCTG +
Preference number: 1 (lower is better)
Translates to: PLESMNSMGMWILGL*KTGGSCGRYICPRL
Trigger: CAGCCTGGGGCAGATATACCTACCACAGGAGCCCCCTGTCTTTCATAGGCCAAGGATCCACATACCCATAGAGTTCATGGATTCTAGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
3UTR TCA 90 bp TCCCTGGGGGTCAAGGACCATGTCCGTTCATCCTTGTGGCCAACATaGTCTGTACATTCTCTGGCACAAGGTAGGCACCCAGTGACATTT +
Preference number: 1 (lower is better)
Translates to: SLGVKDHVRSSLWPT*SVHSLAQGRHPVTF
Trigger: AAATGTCACTGGGTGCCTACCTTGTGCCAGAGAATGTACAGATCATGTTGGCCACAAGGATGAACGGACATGGTCCTTGACCCCCAGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR CCA 90 bp TCTTCCTTGACCCTGACCTGTCTCCCAGGATTAGTGGTGACAGTGTaGGTGAGAGTGTCGGATCAATGGAAAAAGCAGTGCTCACGTGAG +
Preference number: 1 (lower is better)
Translates to: SSLTLTCLPGLVVTV*VRVSDQWKKQCSRE
Trigger: CTCACGTGAGCACTGCTTTTTCCATTGATCCGACACTCTCACCCACACTGTCACCACTAATCCTGGGAGACAGGTCAGGGTCAAGGAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR TCA 90 bp GTAGTTATTGGACCCAGTTTCTTACATGGCATCAGTTGCTGGGGCTaGGGATTTGCCCTCTGCCTTAGATGGGGCTCTTGTTCTGCAGGT +
Preference number: 1 (lower is better)
Translates to: VVIGPSFLHGISCWG*GFALCLRWGSCSAG
Trigger: ACCTGCAGAACAAGAGCCCCATCTAAGGCAGAGGGCAAATCCTCAGCCCCAGCAACTGATGCCATGTAAGAAACTGGGTCCAATAACTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR CCA 90 bp ATCAATGGAAAAAGCAGTGCTCACGTGAGGCTGGTCATGCCAGCTTaGACATCACTGTGTCTGGAGCTCAGTTTCCCTAGTCTGCCAACA +
Preference number: 1 (lower is better)
Translates to: INGKSSAHVRLVMPA*TSLCLELSFPSLPT
Trigger: TGTTGGCAGACTAGGGAAACTGAGCTCCAGACACAGTGATGTCCAAGCTGGCATGACCAGCCTCACGTGAGCACTGCTTTTTCCATTGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR GCA 90 bp GGGCAGAAATGGTTGCGTCCAGGAGAGGCTAGTGGTGTGCTGGCCTaGCAGCTGCAGTTCATATGTATGTTGAAGCAGCGTTTATTTTTA +
Preference number: 1 (lower is better)
Translates to: GQKWLRPGEASGVLA*QLQFICMLKQRLFL
Trigger: TAAAAATAAACGCTGCTTCAACATACATATGAACTGCAGCTGGCAGGCCAGCACACCACTAGCCTCTCCTGGACGCAACCATTTCTGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337827.8
3UTR CCA 90 bp AGAGGGCTGGCTAAAGGCAAGCACGGCGGCAGGGCAATACCTATTTaGAGAAGCAATTTGCTTTCCATTTCTAAGCCCCAAGTAGAATCC +
Preference number: 1 (lower is better)
Translates to: RGLAKGKHGGRAIPI*RSNLLSISKPQVES
Trigger: GGATTCTACTTGGGGCTTAGAAATGGAAAGCAAATTGCTTCTCCAAATAGGTATTGCCCTGCCGCCGTGCTTGCCTTTAGCCAGCCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337827.8
3UTR CCA 90 bp ACAAGGGGGAGAAGAGTTGCTCCTGTAGAACATTACGGAAGTGCCTaGGTGGAGGATGGAGTGTTGCTTGGAACATTTATGAGAAGGGAT +
Preference number: 1 (lower is better)
Translates to: TRGRRVAPVEHYGSA*VEDGVLLGTFMRRD
Trigger: ATCCCTTCTCATAAATGTTCCAAGCAACACTCCATCCTCCACCCAGGCACTTCCGTAATGTTCTACAGGAGCAACTCTTCTCCCCCTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR CCA 90 bp TGGAGGCAGAAAGGAAGGCGCTGGTGCATGTGGACATGTAAGAAGTaGTTTTATTCCAGGTGTGTGTTTCATAAAGACGAGGTCCTCAAG +
Preference number: 1 (lower is better)
Translates to: WRQKGRRWCMWTCKK*FYSRCVFHKDEVLK
Trigger: CTTGAGGACCTCGTCTTTATGAAACACACACCTGGAATAAAACCACTTCTTACATGTCCACATGCACCAGCGCCTTCCTTTCTGCCTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337827.8
3UTR CCA 90 bp AGTGTCTTACTCCCTTCTTTCTCTTCCACTAAAGTGCAAATTCCCTaGGGGTCAAGGACCATGTCCGTTCATCCTTGTGGCCAACATGAT +
Preference number: 1 (lower is better)
Translates to: SVLLPSFSSTKVQIP*GSRTMSVHPCGQHD
Trigger: ATCATGTTGGCCACAAGGATGAACGGACATGGTCCTTGACCCCCAGGGAATTTGCACTTTAGTGGAAGAGAAAGAAGGGAGTAAGACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR GCA 90 bp ACCTTGTTCTTTTGGTGCTTTGCTGCTCTTCTATCCATGTTCATTTaGAAATTACCCATCCTTTGCTGCCAAGACACCATCCGTCCCCAC +
Preference number: 1 (lower is better)
Translates to: TLFFWCFAALLSMFI*KLPILCCQDTIRPH
Trigger: GTGGGGACGGATGGTGTCTTGGCAGCAAAGGATGGGTAATTTGCAAATGAACATGGATAGAAGAGCAGCAAAGCACCAAAAGAACAAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448469.8
3UTR CCA 90 bp TGGTTGCCACGTGCAAATCTGCATTTCCAGCTTCTATGTAGTTATTaGACCCAGTTTCTTACATGGCATCAGTTGCTGGGGCTGAGGATT +
Preference number: 1 (lower is better)
Translates to: WLPRANLHFQLLCSY*TQFLTWHQLLGLRI
Trigger: AATCCTCAGCCCCAGCAACTGATGCCATGTAAGAAACTGGGTCCAATAACTACATAGAAGCTGGAAATGCAGATTTGCACGTGGCAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR GCA 90 bp GAAGGGACTGTGTCCTGGGTAAGAGACCTTGTTCTTTTGGTGCTTTaGTGCTCTTCTATCCATGTTCATTTGCAAATTACCCATCCTTTG +
Preference number: 1 (lower is better)
Translates to: EGTVSWVRDLVLLVL*CSSIHVHLQITHPL
Trigger: CAAAGGATGGGTAATTTGCAAATGAACATGGATAGAAGAGCAGCAAAGCACCAAAAGAACAAGGTCTCTTACCCAGGACACAGTCCCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448469.8
3UTR-3UTR TCA 90 bp TCTGGTCAGCAGTCCTCTTACATTCAACAGGCGCAGCCCCGGCTCCCCAGCCCCAGGCCAGGACAGCACTaGGGGCATCGGGGCGTGCCC +
Preference number: 2 (lower is better)
Translates to: SGQQSSYIQQAQPRLPSPRPGQH*GHRGVP
Trigger: GGGCACGCCCCGATGCCCTCAGTGCTGTCCTGGCCT...GGGGCTGGGGAGCCGGGGCTGCGCCTGTTGAATGTAAGAGGACTGCTGACCAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000448469.8
3UTR-3UTR GCA 90 bp CAGGTGCTGCGGACCACAGACACTTGGCTGCTGACCCCAAGGGCCGTGTGGAGGTCCCCTGGCCCTGCCTaGCTGCACAGCTGGGCCTCA +
Preference number: 2 (lower is better)
Translates to: QVLRTTDTWLLTPRAVWRSPGPA*LHSWAS
Trigger: TGAGGCCCAGCTGTGCAGGCAGGCAGGGCCAGGGGA...CCTCCACACGGCCCTTGGGGTCAGCAGCCAAGTGTCTGTGGTCCGCAGCACCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448469.8
3UTR-3UTR CCA 90 bp CGCTGGCAAGTCCAGAGGGGTGCACTTGGGCACGGGAGTGCTGCCGAGAGGACGCGAAGGGGCCTGCGCTaGCAAGTCCAGAGGGGTGCA +
Preference number: 2 (lower is better)
Translates to: RWQVQRGALGHGSAAERTRRGLR*QVQRGA
Trigger: TGCACCCCTCTGGACTTGCCAGCGCAGGCCCCTTCG...CGTCCTCTCGGCAGCACTCCCGTGCCCAAGTGCACCCCTCTGGACTTGCCAGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
3UTR-3UTR GCA 90 bp GAAGGGGCCTGCGCTGGCAAGTCCAGAGGGGTGCACTTGGGCACGGGAGTGCTGTGCCCCAGGCTGGTCTaGTTTGTAGGGGAGACCCCC +
Preference number: 2 (lower is better)
Translates to: EGACAGKSRGVHLGTGVLCPRLV*FVGETP
Trigger: GGGGGTCTCCCCTACAAAGCAGACCAGCCTGGGGCA...CAGCACTCCCGTGCCCAAGTGCACCCCTCTGGACTTGCCAGCGCAGGCCCCTTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
3UTR-3UTR GCA 90 bp GGGAGACTGGAGGTCTCGCATCACAGAGTCATGCAGGGGCTCCTGGTCAGTGCCCTGCACCAGCCCCACTaGAGGGCAGGGCCGAGGGTG +
Preference number: 2 (lower is better)
Translates to: GRLEVSHHRVMQGLLVSALHQPH*RAGPRV
Trigger: CACCCTCGGCCCTGCCCTGCAGTGGGGCTGGTGCAG...GGCACTGACCAGGAGCCCCTGCATGACTCTGTGATGCGAGACCTCCAGTCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR-3UTR CCA 90 bp GAAGGGGCCTGCGCTGGCAAGTCCAGAGGGGTGCACTTGGGCACGGGAGTGCTGCGGACCACAGACACTTaGCTGCTGACCCCAAGGGCC +
Preference number: 2 (lower is better)
Translates to: EGACAGKSRGVHLGTGVLRTTDT*LLTPRA
Trigger: GGCCCTTGGGGTCAGCAGCCAAGTGTCTGTGGTCCG...CAGCACTCCCGTGCCCAAGTGCACCCCTCTGGACTTGCCAGCGCAGGCCCCTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
3UTR-3UTR GCA 90 bp CAGGTGCTGCGGACCACAGACACTTGGCTGCTGACCCCAAGGGCCGTGTGGAGGCTGGGGAGAGGCCTTTaGCCTGGGCCCAGTTCTGTC +
Preference number: 2 (lower is better)
Translates to: QVLRTTDTWLLTPRAVWRLGRGL*PGPSSV
Trigger: GACAGAACTGGGCCCAGGGCAAAGGCCTCTCCCCAG...CCTCCACACGGCCCTTGGGGTCAGCAGCCAAGTGTCTGTGGTCCGCAGCACCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
3UTR-3UTR GCA 90 bp TCTGGTCAGCAGTCCTCTTACATTCAACAGGCGCAGCCCCGGCTCCCCAGCCCCAGCCCCAAAGGTCCATaGCCGAGTGTGGCCCAGGCC +
Preference number: 2 (lower is better)
Translates to: SGQQSSYIQQAQPRLPSPSPKGP*PSVAQA
Trigger: GGCCTGGGCCACACTCGGGCATGGACCTTTGGGGCT...GGGGCTGGGGAGCCGGGGCTGCGCCTGTTGAATGTAAGAGGACTGCTGACCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
3UTR-3UTR CCA 90 bp GAGAGGACGCTGGTGAGAGTCAGGAGGCGAAACTGCTGGAGAGCCCTCCAGAGCGGCAAAGCATGGCCCTaGGAGCGAAGGGGCCTGCGC +
Preference number: 2 (lower is better)
Translates to: ERTLVRVRRRNCWRALQSGKAWP*ERRGLR
Trigger: GCGCAGGCCCCTTCGCTCCCAGGGCCATGCTTTGCC...GCTCTGGAGGGCTCTCCAGCAGTTTCGCCTCCTGACTCTCACCAGCGTCCTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
3UTR-3UTR TCA 90 bp CAGGTGCTGCGGACCACAGACACTTGGCTGCTGACCCCAAGGGCCGTGTGGAGGAGCCTGGGCTCCACCTaGCCTGTGCTGATTCCTGGT +
Preference number: 2 (lower is better)
Translates to: QVLRTTDTWLLTPRAVWRSLGST*PVLIPG
Trigger: ACCAGGAATCAGCACAGGTCAGGTGGAGCCCAGGCT...CCTCCACACGGCCCTTGGGGTCAGCAGCCAAGTGTCTGTGGTCCGCAGCACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337827.8
3UTR-3UTR GCA 90 bp CAGGTGCTGCGGACCACAGACACTTGGCTGCTGACCCCAAGGGCCGTGTGGAGGGCCCTCCAGAGCAGGTaGTGCGGACCACAGACACTT +
Preference number: 2 (lower is better)
Translates to: QVLRTTDTWLLTPRAVWRALQSR*CGPQTL
Trigger: AAGTGTCTGTGGTCCGCAGCACCTGCTCTGGAGGGC...CCTCCACACGGCCCTTGGGGTCAGCAGCCAAGTGTCTGTGGTCCGCAGCACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
3UTR-3UTR CCA 90 bp GGGAGACATCCCCCGCAGGCCTTGGGGTGCTGGAACCCTGGGACGACAGTCATAGGGCACCACAGGGCATaGAGGCCGACGAGCAAGCTA +
Preference number: 2 (lower is better)
Translates to: GRHPPQALGCWNPGTTVIGHHRA*RPTSKL
Trigger: TAGCTTGCTCGTCGGCCTCCATGCCCTGTGGTGCCC...TATGACTGTCGTCCCAGGGTTCCAGCACCCCAAGGCCTGCGGGGGATGTCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337827.8
3UTR-3UTR TCA 90 bp TCTGGCCCTGGTGCAGAAGTCCCTTCTGCTGCCCTGCCCATAGGCTTTCGGGGGCAGGCGATGGCAGTTTaGGCACGCCAGGGAGGAAGA +
Preference number: 2 (lower is better)
Translates to: SGPGAEVPSAALPIGFRGQAMAV*ARQGGR
Trigger: TCTTCCTCCCTGGCGTGCTCAAACTGCCATCGCCTG...CCCCCGAAAGCCTATGGGCAGGGCAGCAGAAGGGACTTCTGCACCAGGGCCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337827.8
3UTR-3UTR TCA 90 bp CGCTGGCAAGTCCAGAGGGGTGCACTTGGGCACGGGAGTGCTGCCGAGAGGACGGTCCTGGCAGAAATGTaGGGAGATGGGAACAGCCCA +
Preference number: 2 (lower is better)
Translates to: RWQVQRGALGHGSAAERTVLAEM*GDGNSP
Trigger: TGGGCTGTTCCCATCTCCTCACATTTCTGCCAGGAC...CGTCCTCTCGGCAGCACTCCCGTGCCCAAGTGCACCCCTCTGGACTTGCCAGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448469.8
3UTR-3UTR GCA 90 bp TCTGGTCAGCAGTCCTCTTACATTCAACAGGCGCAGCCCCGGCTCCCCAGCCCCGTCAGGAGGCGAAACTaGTGGAGAGCCCTCCAGAGC +
Preference number: 2 (lower is better)
Translates to: SGQQSSYIQQAQPRLPSPVRRRN*WRALQS
Trigger: GCTCTGGAGGGCTCTCCAGCAGTTTCGCCTCCTGAC...GGGGCTGGGGAGCCGGGGCTGCGCCTGTTGAATGTAAGAGGACTGCTGACCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
3UTR-3UTR GCA 90 bp CGCTGGCAAGTCCAGAGGGGTGCACTTGGGCACGGGAGTGCTGCCGAGAGGACGAGAACAGGGCTGCGTTaGCACAAAGGACCGGCTGAT +
Preference number: 2 (lower is better)
Translates to: RWQVQRGALGHGSAAERTRTGLR*HKGPAD
Trigger: ATCAGCCGGTCCTTTGTGGCAACGCAGCCCTGTTCT...CGTCCTCTCGGCAGCACTCCCGTGCCCAAGTGCACCCCTCTGGACTTGCCAGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
3UTR-3UTR GCA 90 bp CGCTGGCAAGTCCAGAGGGGTGCACTTGGGCACGGGAGTGCTGCCGAGAGGACGGGTCCCGAAGTCTCATaGAAAAGGTACAGGAGGCCC +
Preference number: 2 (lower is better)
Translates to: RWQVQRGALGHGSAAERTGPEVS*KRYRRP
Trigger: GGGCCTCCTGTACCTTTTGCATGAGACTTCGGGACC...CGTCCTCTCGGCAGCACTCCCGTGCCCAAGTGCACCCCTCTGGACTTGCCAGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448469.8
3UTR-3UTR GCA 90 bp CAGGGCTGCGTTGCCACAAAGGACCGGCTGATAAGTGCAGAGCCTGATCTGACCCGGGGCGTGCCCGCCTaGGCCCTCCTAGAACAAGCT +
Preference number: 2 (lower is better)
Translates to: QGCVATKDRLISAEPDLTRGVPA*ALLEQA
Trigger: AGCTTGTTCTAGGAGGGCGCAGGCGGGCACGCCCCG...GGTCAGATCAGGCTCTGCACTTATCAGCCGGTCCTTTGTGGCAACGCAGCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448469.8
3UTR-3UTR GCA 90 bp GAGAGGACGCTGGTGAGAGTCAGGAGGCGAAACTGCTGGAGAGCCCTCCAGAGCAATTTCCCCTGGCCCTaGCTGCCTGCACAGCTGGGC +
Preference number: 2 (lower is better)
Translates to: ERTLVRVRRRNCWRALQSNFPWP*LPAQLG
Trigger: GCCCAGCTGTGCAGGCAGGCAGGGCCAGGGGAAATT...GCTCTGGAGGGCTCTCCAGCAGTTTCGCCTCCTGACTCTCACCAGCGTCCTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448469.8
3UTR-3UTR CCA 90 bp CGCTGGCAAGTCCAGAGGGGTGCACTTGGGCACGGGAGTGCTGCCGAGAGGACGCGTGGGGTAGATGTGTaGATGTGTTCTCAGCGGCTG +
Preference number: 2 (lower is better)
Translates to: RWQVQRGALGHGSAAERTRGVDV*MCSQRL
Trigger: CAGCCGCTGAGAACACATCCACACATCTACCCCACG...CGTCCTCTCGGCAGCACTCCCGTGCCCAAGTGCACCCCTCTGGACTTGCCAGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
3UTR-3UTR CCA 90 bp CTGTTGGCCCCCACCAGAGCAGTCAGGAGTTCCTGGGGCACCACAGGGCATGGAGTCCATGCCCGAGTGTaGCCCAGGCCTTCTAGTCCA +
Preference number: 2 (lower is better)
Translates to: LLAPTRAVRSSWGTTGHGVHARV*PRPSSP
Trigger: TGGACTAGAAGGCCTGGGCCACACTCGGGCATGGAC...TCCATGCCCTGTGGTGCCCCAGGAACTCCTGACTGCTCTGGTGGGGGCCAACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337827.8
3UTR-3UTR CCA 90 bp GGGAGACTGGAGGTCTCGCATCACAGAGTCATGCAGGGGCTCCTGGTCAGTGCCGAGCAGGGGAAGTGCTaGAGCAGCCTCTGGGCCTTG +
Preference number: 2 (lower is better)
Translates to: GRLEVSHHRVMQGLLVSAEQGKC*SSLWAL
Trigger: CAAGGCCCAGAGGCTGCTCCAGCACTTCCCCTGCTC...GGCACTGACCAGGAGCCCCTGCATGACTCTGTGATGCGAGACCTCCAGTCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR-3UTR CCA 90 bp CACCCCCTAGTGGGAAGCTGCCTTCTTTGTAGGGATGAAGTGTGGGGCCAGCAGGAGACCCAGCCTCTCTaGGCCCACATGGCCCCCGCA +
Preference number: 2 (lower is better)
Translates to: HPLVGSCLLCRDEVWGQQETQPL*AHMAPA
Trigger: TGCGGGGGCCATGTGGGCCCAGAGAGGCTGGGTCTC...CTGCTGGCCCCACACTTCATCCCTACAAAGAAGGCAGCTTCCCACTAGGGGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR-3UTR TCA 90 bp GTAGGCGGTGGGTGGTGGGCTGTGCTCCCTGAGAGGACGGAGGGGTGGATGGGGTGTTCTCAGCGGCTGTaGAAAGGAACTGGGAGTTCT +
Preference number: 2 (lower is better)
Translates to: VGGGWWAVLPERTEGWMGCSQRL*KGTGSS
Trigger: AGAACTCCCAGTTCCTTTTCACAGCCGCTGAGAACA...CCCCATCCACCCCTCCGTCCTCTCAGGGAGCACAGCCCACCACCCACCGCCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337827.8
3UTR-3UTR TCA 90 bp GAGAGGACGCTGGTGAGAGTCAGGAGGCGAAACTGCTGGAGAGCCCTCCAGAGCCAGGCGATGGCAGTTTaGGCACGCCAGGGAGGAAGA +
Preference number: 2 (lower is better)
Translates to: ERTLVRVRRRNCWRALQSQAMAV*ARQGGR
Trigger: TCTTCCTCCCTGGCGTGCTCAAACTGCCATCGCCTG...GCTCTGGAGGGCTCTCCAGCAGTTTCGCCTCCTGACTCTCACCAGCGTCCTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
3UTR-3UTR TCA 90 bp AAGGGGCCTGCGCTGGCAAGTCCAGAGGGGTGCACTTGGGCACGGGAGTGCTGCCCACCTGACCTGTGCTaGTTCCTGGTTTTGGTCCAA +
Preference number: 2 (lower is better)
Translates to: KGPALASPEGCTWARECCPPDLC*FLVLVQ
Trigger: TTGGACCAAAACCAGGAATCAGCACAGGTCAGGTGG...GCAGCACTCCCGTGCCCAAGTGCACCCCTCTGGACTTGCCAGCGCAGGCCCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000337827.8
3UTR-3UTR GCA 90 bp CCTCTTGAAGGCCCTCTGGTCAGCAGTCCTCTTACATTCAACAGGCGCAGCCCCTGGGCACGGGAGTGCTaGCGAGAGGACGCTGGTGAG +
Preference number: 2 (lower is better)
Translates to: PLEGPLVSSPLTFNRRSPWAREC*REDAGE
Trigger: CTCACCAGCGTCCTCTCGGCAGCACTCCCGTGCCCA...GGGGCTGCGCCTGTTGAATGTAAGAGGACTGCTGACCAGAGGGCCTTCAAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
3UTR-3UTR GCA 90 bp CAGGGCTGCGTTGCCACAAAGGACCGGCTGATAAGTGCAGAGCCTGATCTGACCAGCCCCAAAGGTCCATaGCCGAGTGTGGCCCAGGCC +
Preference number: 2 (lower is better)
Translates to: QGCVATKDRLISAEPDLTSPKGP*PSVAQA
Trigger: GGCCTGGGCCACACTCGGGCATGGACCTTTGGGGCT...GGTCAGATCAGGCTCTGCACTTATCAGCCGGTCCTTTGTGGCAACGCAGCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
3UTR-3UTR CCA 90 bp GTAGGCGGTGGGTGGTGGGCTGTGCTCCCTGAGAGGACGGAGGGGTGGATGGGGCAGAAAGGAAGGCGCTaGTGCATGTGGACATGTAAG +
Preference number: 2 (lower is better)
Translates to: VGGGWWAVLPERTEGWMGQKGRR*CMWTCK
Trigger: CTTACATGTCCACATGCACCAGCGCCTTCCTTTCTG...CCCCATCCACCCCTCCGTCCTCTCAGGGAGCACAGCCCACCACCCACCGCCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337827.8
3UTR-3UTR CCA 90 bp CGCTGGCAAGTCCAGAGGGGTGCACTTGGGCACGGGAGTGCTGCCGAGAGGACGACCTGTGCTGATTCCTaGTTTTGGTCCAAGGCCTGC +
Preference number: 2 (lower is better)
Translates to: RWQVQRGALGHGSAAERTTCADS*FWSKAC
Trigger: GCAGGCCTTGGACCAAAACCAGGAATCAGCACAGGT...CGTCCTCTCGGCAGCACTCCCGTGCCCAAGTGCACCCCTCTGGACTTGCCAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337827.8
3UTR-3UTR CCA 90 bp CGCTGGCAAGTCCAGAGGGGTGCACTTGGGCACGGGAGTGCTGCCGAGAGGACGCTTAGGGGCTGTTCTTaGTCCAGAAGGGAAGTTCCC +
Preference number: 2 (lower is better)
Translates to: RWQVQRGALGHGSAAERTLRGCS*SRREVP
Trigger: GGGAACTTCCCTTCTGGACCAAGAACAGCCCCTAAG...CGTCCTCTCGGCAGCACTCCCGTGCCCAAGTGCACCCCTCTGGACTTGCCAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448469.8
3UTR-3UTR CCA 90 bp CCTCCAGCAATGCCCAGCTGGAGAGAGTATGGCCATCCTCACCCCAGGGAGTCGGAGATAATTCCTCAGTaGGAGGGGGTGGGCGTGGGC +
Preference number: 2 (lower is better)
Translates to: PPAMPSWREYGHPHPRESEIIPQ*EGVGVG
Trigger: GCCCACGCCCACCCCCTCCCACTGAGGAATTATCTC...CGACTCCCTGGGGTGAGGATGGCCATACTCTCTCCAGCTGGGCATTGCTGGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR-3UTR TCA 90 bp GAGAGGACGCTGGTGAGAGTCAGGAGGCGAAACTGCTGGAGAGCCCTCCAGAGCAGGAGGCTTCCCAGATaGACAGGGGATCTGAGGCTG +
Preference number: 2 (lower is better)
Translates to: ERTLVRVRRRNCWRALQSRRLPR*TGDLRL
Trigger: CAGCCTCAGATCCCCTGTTCATCTGGGAAGCCTCCT...GCTCTGGAGGGCTCTCCAGCAGTTTCGCCTCCTGACTCTCACCAGCGTCCTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
3UTR-3UTR TCA 90 bp CGCTGGCAAGTCCAGAGGGGTGCACTTGGGCACGGGAGTGCTGCCGAGAGGACGGATAAGTGCAGAGCCTaGTCTGACCACAGCAAAGGA +
Preference number: 2 (lower is better)
Translates to: RWQVQRGALGHGSAAERTDKCRA*SDHSKG
Trigger: TCCTTTGCTGTGGTCAGATCAGGCTCTGCACTTATC...CGTCCTCTCGGCAGCACTCCCGTGCCCAAGTGCACCCCTCTGGACTTGCCAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
3UTR-3UTR TCA 90 bp GGGAGACATCCCCCGCAGGCCTTGGGGTGCTGGAACCCTGGGACGACAGTCATACAAGAGGAGAGAGCCTaGCTCAGGAGAAGCAAGCAC +
Preference number: 2 (lower is better)
Translates to: GRHPPQALGCWNPGTTVIQEERA*LRRSKH
Trigger: GTGCTTGCTTCTCCTGAGTCAGGCTCTCTCCTCTTG...TATGACTGTCGTCCCAGGGTTCCAGCACCCCAAGGCCTGCGGGGGATGTCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337827.8
3UTR-3UTR GCA 90 bp GAAGGGGCCTGCGCTGGCAAGTCCAGAGGGGTGCACTTGGGCACGGGAGTGCTGTGTGGTAGGTATATCTaGCCCAGGCTGGTCTGCTTT +
Preference number: 2 (lower is better)
Translates to: EGACAGKSRGVHLGTGVLCGRYI*PRLVCF
Trigger: AAAGCAGACCAGCCTGGGGCAGATATACCTACCACA...CAGCACTCCCGTGCCCAAGTGCACCCCTCTGGACTTGCCAGCGCAGGCCCCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
3UTR-3UTR GCA 90 bp GAGAAGCTGGCTGGGTTGCCCCCTCCTTCTGGAGGAGCACTGACTCAGACCATCGCCCTCCAGAGCAGGTaGTGCGGACCACAGACACTT +
Preference number: 2 (lower is better)
Translates to: EKLAGLPPPSGGALTQTIALQSR*CGPQTL
Trigger: AAGTGTCTGTGGTCCGCAGCACCTGCTCTGGAGGGC...GATGGTCTGAGTCAGTGCTCCTCCAGAAGGAGGGGGCAACCCAGCCAGCTTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337827.8
3UTR-3UTR GCA 90 bp AATTGTCCTCAGATGGCTCTGGAGCCTCAGTCCAGGTCGGCTACTCAGACAGCCTGGGCACGGGAGTGCTaGCGAGAGGACGCTGGTGAG +
Preference number: 2 (lower is better)
Translates to: NCPQMALEPQSRSATQTAWAREC*REDAGE
Trigger: CTCACCAGCGTCCTCTCGGCAGCACTCCCGTGCCCA...GGCTGTCTGAGTAGCCGACCTGGACTGAGGCTCCAGAGCCATCTGAGGACAATT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337827.8
3UTR-3UTR CCA 90 bp CAGGTGCTGCGGACCACAGACACTTGGCTGCTGACCCCAAGGGCCGTGTGGAGGTCCAAGACAAGGCCGTaGGGTAGATGTGTGGATGTG +
Preference number: 2 (lower is better)
Translates to: QVLRTTDTWLLTPRAVWRSKTRP*GRCVDV
Trigger: CACATCCACACATCTACCCCACGGCCTTGTCTTGGA...CCTCCACACGGCCCTTGGGGTCAGCAGCCAAGTGTCTGTGGTCCGCAGCACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
3UTR-3UTR CCA 90 bp CAGGTGCTGCGGACCACAGACACTTGGCTGCTGACCCCAAGGGCCGTGTGGAGGGGGTATGTGGATCCTTaGCCTATGAAAGACAGGGGG +
Preference number: 2 (lower is better)
Translates to: QVLRTTDTWLLTPRAVWRGYVDP*PMKDRG
Trigger: CCCCCTGTCTTTCATAGGCCAAGGATCCACATACCC...CCTCCACACGGCCCTTGGGGTCAGCAGCCAAGTGTCTGTGGTCCGCAGCACCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
3UTR-3UTR CCA 90 bp GCAGGGTGTGGGGATAGCAGGAGCAGTTCCAAGACAAGGCCGTGGGGTAGATGTCCTTTCAGTGGGTCCTaGCGGCAGGGACAGGGCACT +
Preference number: 2 (lower is better)
Translates to: AGCGDSRSSSKTRPWGRCPFSGS*RQGQGT
Trigger: AGTGCCCTGTCCCTGCCGCCAGGACCCACTGAAAGG...ACATCTACCCCACGGCCTTGTCTTGGAACTGCTCCTGCTATCCCCACACCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448469.8
3UTR-3UTR CCA 90 bp CACCCCCTAGTGGGAAGCTGCCTTCTTTGTAGGGATGAAGTGTGGGGCCAGCAGATGCCATCGGGAGCCTaGCAGGACTTGCAGGGGCAG +
Preference number: 2 (lower is better)
Translates to: HPLVGSCLLCRDEVWGQQMPSGA*QDLQGQ
Trigger: CTGCCCCTGCAAGTCCTGCCAGGCTCCCGATGGCAT...CTGCTGGCCCCACACTTCATCCCTACAAAGAAGGCAGCTTCCCACTAGGGGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR-3UTR TCA 90 bp CGCTGGCAAGTCCAGAGGGGTGCACTTGGGCACGGGAGTGCTGCCGAGAGGACGGCACAGTGCAATAGCTaGCCCTTCAAGAAAATCCCT +
Preference number: 2 (lower is better)
Translates to: RWQVQRGALGHGSAAERTAQCNS*PFKKIP
Trigger: AGGGATTTTCTTGAAGGGTCAGCTATTGCACTGTGC...CGTCCTCTCGGCAGCACTCCCGTGCCCAAGTGCACCCCTCTGGACTTGCCAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
3UTR-3UTR TCA 90 bp TTGGCCTATGAAAGACAGGGGGCTCCTGTGGTAGGTATATCTGCCCCAGGCTGGCAAGAGCCAGTGGGGTaGGGAAGCAGGGTGTGGGGA +
Preference number: 2 (lower is better)
Translates to: LAYERQGAPVVGISAPGWQEPVG*GSRVWG
Trigger: TCCCCACACCCTGCTTCCTCACCCCACTGGCTCTTG...CCAGCCTGGGGCAGATATACCTACCACAGGAGCCCCCTGTCTTTCATAGGCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
3UTR-3UTR TCA 90 bp CCTCCAGCAATGCCCAGCTGGAGAGAGTATGGCCATCCTCACCCCAGGGAGTCGAAAGCAGTGCTCACGTaGGGCTGGTCATGCCAGCTT +
Preference number: 2 (lower is better)
Translates to: PPAMPSWREYGHPHPRESKAVLT*GWSCQL
Trigger: AAGCTGGCATGACCAGCCTCACGTGAGCACTGCTTT...CGACTCCCTGGGGTGAGGATGGCCATACTCTCTCCAGCTGGGCATTGCTGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR-3UTR TCA 90 bp GCCCTCTGCCTTAGATGGGGCTCTTGTTCTGCAGGTCACCATAGTTCCTGCCTGACTGCTTGCACCGACTaGGGCAGGCTAGCCAGTGGC +
Preference number: 2 (lower is better)
Translates to: ALCLRWGSCSAGHHSSCLTACTD*GRLASG
Trigger: GCCACTGGCTAGCCTGCCTCAGTCGGTGCAAGCAGT...CAGGCAGGAACTATGGTGACCTGCAGAACAAGAGCCCCATCTAAGGCAGAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR-3UTR TCA 90 bp CACCCCCTAGTGGGAAGCTGCCTTCTTTGTAGGGATGAAGTGTGGGGCCAGCAGGGGAATGCAAGGACGTaGTGGGTAGGGCTGAGACCC +
Preference number: 2 (lower is better)
Translates to: HPLVGSCLLCRDEVWGQQGNART*WVGLRP
Trigger: GGGTCTCAGCCCTACCCATCACGTCCTTGCATTCCC...CTGCTGGCCCCACACTTCATCCCTACAAAGAAGGCAGCTTCCCACTAGGGGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR-3UTR GCA 90 bp GTGCCTGGCAGTGAAGACCTCTTCCCATTAGAGAAGCTGGCTGGGTTGCCCCCTCTCCAGAGCAGGTGCTaGGGACCACAGACACTTGGC +
Preference number: 2 (lower is better)
Translates to: VPGSEDLFPLEKLAGLPPLQSRC*GPQTLG
Trigger: GCCAAGTGTCTGTGGTCCGCAGCACCTGCTCTGGAG...AGGGGGCAACCCAGCCAGCTTCTCTAATGGGAAGAGGTCTTCACTGCCAGGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337827.8
3UTR-3UTR GCA 90 bp GTCCGCACCCCTAGTACACTCTTCTCCACGCTTCACAGGGCTGAATTAAGCAGGGTGGGTGGTGGGCTGTaGTCCCTGAGAGGACGGAGG +
Preference number: 2 (lower is better)
Translates to: VRTPSTLFSTLHRAELSRVGGGL*SLRGRR
Trigger: CCTCCGTCCTCTCAGGGAGCACAGCCCACCACCCAC...CCTGCTTAATTCAGCCCTGTGAAGCGTGGAGAAGAGTGTACTAGGGGTGCGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337827.8
3UTR-3UTR CCA 90 bp GAGTGCTGCCGAGAGGACGCTGGTGAGAGTCAGGAGGCGAAACTGCTGGAGAGCCGTGGGGTAGATGTGTaGATGTGTTCTCAGCGGCTG +
Preference number: 2 (lower is better)
Translates to: ECCREDAGESQEAKLLESRGVDV*MCSQRL
Trigger: CAGCCGCTGAGAACACATCCACACATCTACCCCACG...GCTCTCCAGCAGTTTCGCCTCCTGACTCTCACCAGCGTCCTCTCGGCAGCACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
3UTR-3UTR CCA 90 bp GTCCGCACCCCTAGTACACTCTTCTCCACGCTTCACAGGGCTGAATTAAGCAGGCGAAGGGGCCTGCGCTaGCAAGTCCAGAGGGGTGCA +
Preference number: 2 (lower is better)
Translates to: VRTPSTLFSTLHRAELSRRRGLR*QVQRGA
Trigger: TGCACCCCTCTGGACTTGCCAGCGCAGGCCCCTTCG...CCTGCTTAATTCAGCCCTGTGAAGCGTGGAGAAGAGTGTACTAGGGGTGCGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000337827.8
3UTR-3UTR CCA 90 bp GTGCCTGGCAGTGAAGACCTCTTCCCATTAGAGAAGCTGGCTGGGTTGCCCCCTGGAAGGAGAGAGGGCTaGCTAAAGGCAAGCACGGCG +
Preference number: 2 (lower is better)
Translates to: VPGSEDLFPLEKLAGLPPGRREG*LKASTA
Trigger: CGCCGTGCTTGCCTTTAGCCAGCCCTCTCTCCTTCC...AGGGGGCAACCCAGCCAGCTTCTCTAATGGGAAGAGGTCTTCACTGCCAGGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337827.8
3UTR-3UTR CCA 90 bp TCCATCACACCAGGTCTGAGGCACAGGAGCCTCTCGGATACAGGAAACCCAGCTTTGGGTCCCATTCCCTaGGTGGTGAGGGAGCCCTCC +
Preference number: 2 (lower is better)
Translates to: SITPGLRHRSLSDTGNPALGPIP*VVREPS
Trigger: GGAGGGCTCCCTCACCACCCAGGGAATGGGACCCAA...AGCTGGGTTTCCTGTATCCGAGAGGCTCCTGTGCCTCAGACCTGGTGTGATGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR-3UTR TCA 90 bp CTGGGAGACATCCCCCGCAGGCCTTGGGGTGCTGGAACCCTGGGACGACAGTCAGCACAGTGCAATAGCTaGCCCTTCAAGAAAATCCCT +
Preference number: 2 (lower is better)
Translates to: LGDIPRRPWGAGTLGRQSAQCNS*PFKKIP
Trigger: AGGGATTTTCTTGAAGGGTCAGCTATTGCACTGTGC...TGACTGTCGTCCCAGGGTTCCAGCACCCCAAGGCCTGCGGGGGATGTCTCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000337827.8
3UTR-3UTR TCA 90 bp CCTCTTGAAGGCCCTCTGGTCAGCAGTCCTCTTACATTCAACAGGCGCAGCCCCACAGAGAGACCCTCTTaGAGGCCCTCTGGTCAGCAG +
Preference number: 2 (lower is better)
Translates to: PLEGPLVSSPLTFNRRSPTERPS*RPSGQQ
Trigger: CTGCTGACCAGAGGGCCTTCAAGAGGGTCTCTCTGT...GGGGCTGCGCCTGTTGAATGTAAGAGGACTGCTGACCAGAGGGCCTTCAAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
3UTR-3UTR TCA 90 bp CAGGGCTGCGTTGCCACAAAGGACCGGCTGATAAGTGCAGAGCCTGATCTGACCACAGAGAGACCCTCTTaGAGGCCCTCTGGTCAGCAG +
Preference number: 2 (lower is better)
Translates to: QGCVATKDRLISAEPDLTTERPS*RPSGQQ
Trigger: CTGCTGACCAGAGGGCCTTCAAGAGGGTCTCTCTGT...GGTCAGATCAGGCTCTGCACTTATCAGCCGGTCCTTTGTGGCAACGCAGCCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
3UTR-3UTR TCA 90 bp GTCCAGCACCCTGACCATCTCCTCTCCCGGGGCAAGGCCAGGACAGCACTGAGGATGGTGGGTATTTGCTaGTGGTCCTGGCAGAAATGT +
Preference number: 2 (lower is better)
Translates to: VQHPDHLLSRGKARTALRMVGIC*WSWQKC
Trigger: ACATTTCTGCCAGGACCATCAGCAAATACCCACCAT...CCTCAGTGCTGTCCTGGCCTTGCCCCGGGAGAGGAGATGGTCAGGGTGCTGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448469.8
3UTR-3UTR TCA 90 bp GTGGCTTCAATCCAGAGCAGAGGTTCAGGCCCTTTGGGGATCAGGGACCTCTTTAACAGTCCAGCACCCTaGCCATCTCCTCTCCCGGGG +
Preference number: 2 (lower is better)
Translates to: VASIQSRGSGPLGIRDLFNSPAP*PSPLPG
Trigger: CCCCGGGAGAGGAGATGGTCAGGGTGCTGGACTGTT...AAAGAGGTCCCTGATCCCCAAAGGGCCTGAACCTCTGCTCTGGATTGAAGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448469.8
3UTR-3UTR GCA 90 bp GTGGCTTCAATCCAGAGCAGAGGTTCAGGCCCTTTGGGGATCAGGGACCTCTTTTGCCCCAGGCTGGTCTaGTTTGTAGGGGAGACCCCC +
Preference number: 2 (lower is better)
Translates to: VASIQSRGSGPLGIRDLFCPRLV*FVGETP
Trigger: GGGGGTCTCCCCTACAAAGCAGACCAGCCTGGGGCA...AAAGAGGTCCCTGATCCCCAAAGGGCCTGAACCTCTGCTCTGGATTGAAGCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
3UTR-3UTR GCA 90 bp GTCCGCACCCCTAGTACACTCTTCTCCACGCTTCACAGGGCTGAATTAAGCAGGACTTGGGCACGGGAGTaGTGCCGAGAGGACGCTGGT +
Preference number: 2 (lower is better)
Translates to: VRTPSTLFSTLHRAELSRTWARE*CREDAG
Trigger: ACCAGCGTCCTCTCGGCAGCACTCCCGTGCCCAAGT...CCTGCTTAATTCAGCCCTGTGAAGCGTGGAGAAGAGTGTACTAGGGGTGCGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337827.8
3UTR-3UTR GCA 90 bp GTGGCTTCAATCCAGAGCAGAGGTTCAGGCCCTTTGGGGATCAGGGACCTCTTTGCAAGTCCAGAGGGGTaGACTTGGGCACGGGAGTGC +
Preference number: 2 (lower is better)
Translates to: VASIQSRGSGPLGIRDLFASPEG*TWAREC
Trigger: GCACTCCCGTGCCCAAGTGCACCCCTCTGGACTTGC...AAAGAGGTCCCTGATCCCCAAAGGGCCTGAACCTCTGCTCTGGATTGAAGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
3UTR-3UTR GCA 90 bp CCTCTTGAAGGCCCTCTGGTCAGCAGTCCTCTTACATTCAACAGGCGCAGCCCCCAGCCTCTCCATCCATaGTGCCCAATTTCCCCTGGC +
Preference number: 2 (lower is better)
Translates to: PLEGPLVSSPLTFNRRSPQPLHP*CPISPG
Trigger: GCCAGGGGAAATTGGGCAGCATGGATGGAGAGGCTG...GGGGCTGCGCCTGTTGAATGTAAGAGGACTGCTGACCAGAGGGCCTTCAAGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448469.8
3UTR-3UTR GCA 90 bp GCTCAAGGATTTGCCCTCAGAGAGGTGGGTGCTCTAGGTGCAGGAGACACTGCAAGGCACCCTCCTCACTaGTTGCACCGACTGAGGCAG +
Preference number: 2 (lower is better)
Translates to: AQGFALREVGALGAGDTARHPPH*LHRLRQ
Trigger: CTGCCTCAGTCGGTGCAAGCAGTGAGGAGGGTGCCT...TGCAGTGTCTCCTGCACCTAGAGCACCCACCTCTCTGAGGGCAAATCCTTGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR-3UTR CCA 90 bp GAAACTGCTGGAGAGCCCTCCAGAGCAGGTGCTGCGGACCACAGACACTTGGCTAGACCCCCAGGGTCCTaGTACCAACAGTCATTTGCC +
Preference number: 2 (lower is better)
Translates to: ETAGEPSRAGAADHRHLARPPGS*YQQSFA
Trigger: GGCAAATGACTGTTGGTACCAGGACCCTGGGGGTCT...AGCCAAGTGTCTGTGGTCCGCAGCACCTGCTCTGGAGGGCTCTCCAGCAGTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
3UTR-3UTR CCA 90 bp AATTGTCCTCAGATGGCTCTGGAGCCTCAGTCCAGGTCGGCTACTCAGACAGCCAGGAGGCGAAACTGCTaGAGAGCCCTCCAGAGCAGG +
Preference number: 2 (lower is better)
Translates to: NCPQMALEPQSRSATQTARRRNC*RALQSR
Trigger: CCTGCTCTGGAGGGCTCTCCAGCAGTTTCGCCTCCT...GGCTGTCTGAGTAGCCGACCTGGACTGAGGCTCCAGAGCCATCTGAGGACAATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337827.8
3UTR-3UTR CCA 90 bp CAGGTGCTGCGGACCACAGACACTTGGCTGCTGACCCCAAGGGCCGTGTGGAGGAGGCGCTGGTGCATGTaGACATGTAAGAAGTGGTTT +
Preference number: 2 (lower is better)
Translates to: QVLRTTDTWLLTPRAVWRRRWCM*TCKKWF
Trigger: AAACCACTTCTTACATGTCCACATGCACCAGCGCCT...CCTCCACACGGCCCTTGGGGTCAGCAGCCAAGTGTCTGTGGTCCGCAGCACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337827.8
3UTR-3UTR CCA 90 bp CAGACAGTGGCTTCAATCCAGAGCAGAGGTTCAGGCCCTTTGGGGATCAGGGACAGTAGGGCCACCTGTTaGCCCCCACCAGAGCAGTCA +
Preference number: 2 (lower is better)
Translates to: QTVASIQSRGSGPLGIRDSRATC*PPPEQS
Trigger: TGACTGCTCTGGTGGGGGCCAACAGGTGGCCCTACT...GTCCCTGATCCCCAAAGGGCCTGAACCTCTGCTCTGGATTGAAGCCACTGTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337827.8
3UTR-3UTR CCA 90 bp CCTCTTGAAGGCCCTCTGGTCAGCAGTCCTCTTACATTCAACAGGCGCAGCCCCAGGCTAGTGGTGTGCTaGCCTGCCAGCTGCAGTTCA +
Preference number: 2 (lower is better)
Translates to: PLEGPLVSSPLTFNRRSPRLVVC*PASCSS
Trigger: TGAACTGCAGCTGGCAGGCCAGCACACCACTAGCCT...GGGGCTGCGCCTGTTGAATGTAAGAGGACTGCTGACCAGAGGGCCTTCAAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337827.8
3UTR-3UTR CCA 90 bp CACCCCCTAGTGGGAAGCTGCCTTCTTTGTAGGGATGAAGTGTGGGGCCAGCAGACACACCCCGTAGGCTaGGTCAGCACAAAGGGGGAA +
Preference number: 2 (lower is better)
Translates to: HPLVGSCLLCRDEVWGQQTHPVG*VSTKGE
Trigger: TTCCCCCTTTGTGCTGACCCAGCCTACGGGGTGTGT...CTGCTGGCCCCACACTTCATCCCTACAAAGAAGGCAGCTTCCCACTAGGGGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR-3UTR CCA 90 bp TCCATCACACCAGGTCTGAGGCACAGGAGCCTCTCGGATACAGGAAACCCAGCTCTCATCCTGTCCTCCTaGGAGAAGAGGGGCACAGGC +
Preference number: 2 (lower is better)
Translates to: SITPGLRHRSLSDTGNPALILSS*EKRGTG
Trigger: GCCTGTGCCCCTCTTCTCCCAGGAGGACAGGATGAG...AGCTGGGTTTCCTGTATCCGAGAGGCTCCTGTGCCTCAGACCTGGTGTGATGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR CAA 90 bp CCCCCGCAGGCCTTGGGGTGCTGGAACCCTGGGACGACAGTCATATaGTCCAGGTTATTTCTCCCAACTGCAGATGGAGACAGCCTTCCT +
Preference number: 2 (lower is better)
Translates to: PPQALGCWNPGTTVI*SRLFLPTADGDSLP
Trigger: AGGAAGGCTGTCTCCATCTGCAGTTGGGAGAAATAACCTGGACAATATGACTGTCGTCCCAGGGTTCCAGCACCCCAAGGCCTGCGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337827.8
3UTR CAA 90 bp TCTGTCCTTGCTTTCTCCGGGCAACAAGGGAGAGACCACACACTATaGTCCCAGCCCCAAGAAGCGCCAAGGGAGAGGACAAAGGGCCAG +
Preference number: 2 (lower is better)
Translates to: SVLAFSGQQGRDHTL*SQPQEAPRERTKGQ
Trigger: CTGGCCCTTTGTCCTCTCCCTTGGCGCTTCTTGGGGCTGGGACAATAGTGTGTGGTCTCTCCCTTGTTGCCCGGAGAAAGCAAGGACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448469.8
3UTR-3UTR TCA 90 bp CCTGGCTGCGGAAGAAACATCACGACAGAGGACAGGCAAAGCATGGCCCTGGGATGGATCCTTGGCCTATaGAAGACAGGGGGCTCCTGT +
Preference number: 2 (lower is better)
Translates to: PGCGRNITTEDRQSMALGWILGL*KTGGSC
Trigger: ACAGGAGCCCCCTGTCTTTCATAGGCCAAGGATCCA...TCCCAGGGCCATGCTTTGCCTGTCCTCTGTCGTGATGTTTCTTCCGCAGCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
3UTR-3UTR TCA 90 bp CCTCTTGAAGGCCCTCTGGTCAGCAGTCCTCTTACATTCAACAGGCGCAGCCCCGTGCAGAGCCTGATCTaGCCACAGCAAAGGACAGAG +
Preference number: 2 (lower is better)
Translates to: PLEGPLVSSPLTFNRRSPVQSLI*PQQRTE
Trigger: CTCTGTCCTTTGCTGTGGTCAGATCAGGCTCTGCAC...GGGGCTGCGCCTGTTGAATGTAAGAGGACTGCTGACCAGAGGGCCTTCAAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
3UTR-3UTR TCA 90 bp GAGAGGACGCTGGTGAGAGTCAGGAGGCGAAACTGCTGGAGAGCCCTCCAGAGCGATAAGTGCAGAGCCTaGTCTGACCACAGCAAAGGA +
Preference number: 2 (lower is better)
Translates to: ERTLVRVRRRNCWRALQSDKCRA*SDHSKG
Trigger: TCCTTTGCTGTGGTCAGATCAGGCTCTGCACTTATC...GCTCTGGAGGGCTCTCCAGCAGTTTCGCCTCCTGACTCTCACCAGCGTCCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
3UTR-3UTR CCA 90 bp GACTTGCTCCTAAGCCCAGACCAAGCTGGACATTGTAGCCAAGGTGTATTCTCTGGCAAAGCATGGCCCTaGGAGCGAAGGGGCCTGCGC +
Preference number: 2 (lower is better)
Translates to: DLLLSPDQAGHCSQGVFSGKAWP*ERRGLR
Trigger: GCGCAGGCCCCTTCGCTCCCAGGGCCATGCTTTGCC...AGAGAATACACCTTGGCTACAATGTCCAGCTTGGTCTGGGCTTAGGAGCAAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337827.8
3UTR-3UTR CCA 90 bp AATTGTCCTCAGATGGCTCTGGAGCCTCAGTCCAGGTCGGCTACTCAGACAGCCGAGAGGCCTTTGCCCTaGGCCCAGTTCTGTCCTAAG +
Preference number: 2 (lower is better)
Translates to: NCPQMALEPQSRSATQTAERPLP*AQFCPK
Trigger: CTTAGGACAGAACTGGGCCCAGGGCAAAGGCCTCTC...GGCTGTCTGAGTAGCCGACCTGGACTGAGGCTCCAGAGCCATCTGAGGACAATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337827.8
3UTR-3UTR CCA 90 bp GGAGGGCAGCTCCGAGGGGACAGGCCTGGCTCACAGGGAAGGAGAGAGGGCTGGAGGGCAATACCTATTTaGAGAAGCAATTTGCTTTCC +
Preference number: 2 (lower is better)
Translates to: GGQLRGDRPGSQGRREGWRAIPI*RSNLLS
Trigger: GGAAAGCAAATTGCTTCTCCAAATAGGTATTGCCCT...CCAGCCCTCTCTCCTTCCCTGTGAGCCAGGCCTGTCCCCTCGGAGCTGCCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337827.8
3UTR-3UTR CCA 90 bp GAGTGCTGCCGAGAGGACGCTGGTGAGAGTCAGGAGGCGAAACTGCTGGAGAGCCAAAAGACCCCTGTGTaGGCTTCTGTCCTTGCTTTC +
Preference number: 2 (lower is better)
Translates to: ECCREDAGESQEAKLLESQKTPV*ASVLAF
Trigger: GAAAGCAAGGACAGAAGCCCACACAGGGGTCTTTTG...GCTCTCCAGCAGTTTCGCCTCCTGACTCTCACCAGCGTCCTCTCGGCAGCACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448469.8
3UTR-3UTR CCA 90 bp TCTGGTCAGCAGTCCTCTTACATTCAACAGGCGCAGCCCCGGCTCCCCAGCCCCGAAGGGACTGTGTCCTaGGTAAGAGACCTTGTTCTT +
Preference number: 2 (lower is better)
Translates to: SGQQSSYIQQAQPRLPSPEGTVS*VRDLVL
Trigger: AAGAACAAGGTCTCTTACCCAGGACACAGTCCCTTC...GGGGCTGGGGAGCCGGGGCTGCGCCTGTTGAATGTAAGAGGACTGCTGACCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000448469.8
3UTR-3UTR CCA 90 bp GTGGCTTCAATCCAGAGCAGAGGTTCAGGCCCTTTGGGGATCAGGGACCTCTTTTACCCGTCCTTTCAGTaGGTCCTGGCGGCAGGGACA +
Preference number: 2 (lower is better)
Translates to: VASIQSRGSGPLGIRDLFYPSFQ*VLAAGT
Trigger: TGTCCCTGCCGCCAGGACCCACTGAAAGGACGGGTA...AAAGAGGTCCCTGATCCCCAAAGGGCCTGAACCTCTGCTCTGGATTGAAGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448469.8
3UTR-3UTR CCA 90 bp CACCCCCTAGTGGGAAGCTGCCTTCTTTGTAGGGATGAAGTGTGGGGCCAGCAGACCCACGTCACTGGGTaGCTGGGAGGATTAGATGAG +
Preference number: 2 (lower is better)
Translates to: HPLVGSCLLCRDEVWGQQTHVTG*LGGLDE
Trigger: CTCATCTAATCCTCCCAGCCACCCAGTGACGTGGGT...CTGCTGGCCCCACACTTCATCCCTACAAAGAAGGCAGCTTCCCACTAGGGGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR-3UTR CCA 90 bp TCCATCACACCAGGTCTGAGGCACAGGAGCCTCTCGGATACAGGAAACCCAGCTCGGAGGGAGAGGCTGTaGCTGCTTTCCAGAATGGCA +
Preference number: 2 (lower is better)
Translates to: SITPGLRHRSLSDTGNPARRERL*LLSRMA
Trigger: TGCCATTCTGGAAAGCAGCCACAGCCTCTCCCTCCG...AGCTGGGTTTCCTGTATCCGAGAGGCTCCTGTGCCTCAGACCTGGTGTGATGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR-3UTR TCA 90 bp GAAACTGCTGGAGAGCCCTCCAGAGCAGGTGCTGCGGACCACAGACACTTGGCTTGTTCTCAGCGGCTGTaGAAAGGAACTGGGAGTTCT +
Preference number: 2 (lower is better)
Translates to: ETAGEPSRAGAADHRHLACSQRL*KGTGSS
Trigger: AGAACTCCCAGTTCCTTTTCACAGCCGCTGAGAACA...AGCCAAGTGTCTGTGGTCCGCAGCACCTGCTCTGGAGGGCTCTCCAGCAGTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
3UTR-3UTR TCA 90 bp CAGACAGTGGCTTCAATCCAGAGCAGAGGTTCAGGCCCTTTGGGGATCAGGGACGTGCAGAGCCTGATCTaGCCACAGCAAAGGACAGAG +
Preference number: 2 (lower is better)
Translates to: QTVASIQSRGSGPLGIRDVQSLI*PQQRTE
Trigger: CTCTGTCCTTTGCTGTGGTCAGATCAGGCTCTGCAC...GTCCCTGATCCCCAAAGGGCCTGAACCTCTGCTCTGGATTGAAGCCACTGTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
3UTR-3UTR TCA 90 bp CAATCTCAGGGCTTCTTGACTCTCCAGGCCACTCAATTCTGGGCTTGTCTGAGACCATTCCCTGGGTGGTaGGGGAGCCCTCCAAGACAG +
Preference number: 2 (lower is better)
Translates to: QSQGFLTLQATQFWACLRPFPGW*GSPPRQ
Trigger: CTGTCTTGGAGGGCTCCCTCACCACCCAGGGAATGG...TCTCAGACAAGCCCAGAATTGAGTGGCCTGGAGAGTCAAGAAGCCCTGAGATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR-3UTR TCA 90 bp CTGCAGGTCACCATAGTTCCTGCCTGGTCCCGACTTTTCTCCTATTGGGGTTTTCCATCACACCAGGTCTaGGGCACAGGAGCCTCTCGG +
Preference number: 2 (lower is better)
Translates to: LQVTIVPAWSRLFSYWGFPSHQV*GTGASR
Trigger: CCGAGAGGCTCCTGTGCCTCAGACCTGGTGTGATGG...AAAACCCCAATAGGAGAAAAGTCGGGACCAGGCAGGAACTATGGTGACCTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR-3UTR GCA 90 bp GAAACTGCTGGAGAGCCCTCCAGAGCAGGTGCTGCGGACCACAGACACTTGGCTTGTGGTAGGTATATCTaGCCCAGGCTGGTCTGCTTT +
Preference number: 2 (lower is better)
Translates to: ETAGEPSRAGAADHRHLACGRYI*PRLVCF
Trigger: AAAGCAGACCAGCCTGGGGCAGATATACCTACCACA...AGCCAAGTGTCTGTGGTCCGCAGCACCTGCTCTGGAGGGCTCTCCAGCAGTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
3UTR-3UTR GCA 90 bp CAGACAGTGGCTTCAATCCAGAGCAGAGGTTCAGGCCCTTTGGGGATCAGGGACGAGGCTGCACCTGGCTaGGGAAGAAACATCACGACA +
Preference number: 2 (lower is better)
Translates to: QTVASIQSRGSGPLGIRDEAAPG*GRNITT
Trigger: TGTCGTGATGTTTCTTCCGCAGCCAGGTGCAGCCTC...GTCCCTGATCCCCAAAGGGCCTGAACCTCTGCTCTGGATTGAAGCCACTGTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
3UTR-3UTR GCA 90 bp CAGACAGTGGCTTCAATCCAGAGCAGAGGTTCAGGCCCTTTGGGGATCAGGGACAGAACAGGGCTGCGTTaGCACAAAGGACCGGCTGAT +
Preference number: 2 (lower is better)
Translates to: QTVASIQSRGSGPLGIRDRTGLR*HKGPAD
Trigger: ATCAGCCGGTCCTTTGTGGCAACGCAGCCCTGTTCT...GTCCCTGATCCCCAAAGGGCCTGAACCTCTGCTCTGGATTGAAGCCACTGTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
3UTR-3UTR GCA 90 bp CAGACAGTGGCTTCAATCCAGAGCAGAGGTTCAGGCCCTTTGGGGATCAGGGACGAGCAAGCTACCAGGTaGAGGACAGGGCTAGACTTG +
Preference number: 2 (lower is better)
Translates to: QTVASIQSRGSGPLGIRDEQATR*RTGLDL
Trigger: CAAGTCTAGCCCTGTCCTGCACCTGGTAGCTTGCTC...GTCCCTGATCCCCAAAGGGCCTGAACCTCTGCTCTGGATTGAAGCCACTGTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337827.8
3UTR-3UTR GCA 90 bp CAGACAGTGGCTTCAATCCAGAGCAGAGGTTCAGGCCCTTTGGGGATCAGGGACGTGGGCTTCTGTCCTTaGTTTCTCCGGGCAACAAGG +
Preference number: 2 (lower is better)
Translates to: QTVASIQSRGSGPLGIRDVGFCP*FLRATR
Trigger: CCTTGTTGCCCGGAGAAAGCAAGGACAGAAGCCCAC...GTCCCTGATCCCCAAAGGGCCTGAACCTCTGCTCTGGATTGAAGCCACTGTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448469.8
3UTR-3UTR GCA 90 bp GCCGGAGGGAGAGGCTGTGGCTGCTTTCCAGAATGGCACAGCAAACTGCTGTTCAAGACAAGTGGTCCCTaGCTTCATGGAGCTCACAGC +
Preference number: 2 (lower is better)
Translates to: AGGRGCGCFPEWHSKLLFKTSGP*LHGAHS
Trigger: GCTGTGAGCTCCATGAAGGCAGGGACCACTTGTCTT...GAACAGCAGTTTGCTGTGCCATTCTGGAAAGCAGCCACAGCCTCTCCCTCCGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR-3UTR CCA 90 bp CAGGGCTGCGTTGCCACAAAGGACCGGCTGATAAGTGCAGAGCCTGATCTGACCGGGTATGTGGATCCTTaGCCTATGAAAGACAGGGGG +
Preference number: 2 (lower is better)
Translates to: QGCVATKDRLISAEPDLTGYVDP*PMKDRG
Trigger: CCCCCTGTCTTTCATAGGCCAAGGATCCACATACCC...GGTCAGATCAGGCTCTGCACTTATCAGCCGGTCCTTTGTGGCAACGCAGCCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
3UTR-3UTR CCA 90 bp GGGAGACTGGAGGTCTCGCATCACAGAGTCATGCAGGGGCTCCTGGTCAGTGCCCAGAAGAGAGCTGGCTaGATTCTGGAAATCCACTGT +
Preference number: 2 (lower is better)
Translates to: GRLEVSHHRVMQGLLVSAQKRAG*ILEIHC
Trigger: ACAGTGGATTTCCAGAATCCAGCCAGCTCTCTTCTG...GGCACTGACCAGGAGCCCCTGCATGACTCTGTGATGCGAGACCTCCAGTCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR-3UTR CCA 90 bp GGGAGACTGGAGGTCTCGCATCACAGAGTCATGCAGGGGCTCCTGGTCAGTGCCAGCACAGAAGAGAGCTaGCTGGATTCTGGAAATCCA +
Preference number: 2 (lower is better)
Translates to: GRLEVSHHRVMQGLLVSASTEES*LDSGNP
Trigger: TGGATTTCCAGAATCCAGCCAGCTCTCTTCTGTGCT...GGCACTGACCAGGAGCCCCTGCATGACTCTGTGATGCGAGACCTCCAGTCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR-3UTR TCA 90 bp TTTTTACCCAGGAAGTATGTCCTGCCTGAATTTGTACCACTGCCTTCTTGTGTGCGGGGGAGGGTGTGCTaGAGGGCTAGGCCTGGAGGC +
Preference number: 2 (lower is better)
Translates to: FLPRKYVLPEFVPLPSCVRGRVC*RARPGG
Trigger: GCCTCCAGGCCTAGCCCTTCAGCACACCCTCCCCCG...CACACAAGAAGGCAGTGGTACAAATTCAGGCAGGACATACTTCCTGGGTAAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000337827.8
3UTR-3UTR TCA 90 bp AATGCCCGAGAGAGAGGTCTCAGCCTGACACATGGCCAAATAGAAGTGGAGTCTTGGGCTTGGCATCTCTaGCAGGTCACCGGGCTTCTC +
Preference number: 2 (lower is better)
Translates to: NARERGLSLTHGQIEVESWAWHL*QVTGLL
Trigger: GAGAAGCCCGGTGACCTGTCAGAGATGCCAAGCCCA...AGACTCCACTTCTATTTGGCCATGTGTCAGGCTGAGACCTCTCTCTCGGGCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448469.8
3UTR-3UTR GCA 90 bp GTGGCTTCAATCCAGAGCAGAGGTTCAGGCCCTTTGGGGATCAGGGACCTCTTTGAGGCTGCACCTGGCTaGGGAAGAAACATCACGACA +
Preference number: 2 (lower is better)
Translates to: VASIQSRGSGPLGIRDLFEAAPG*GRNITT
Trigger: TGTCGTGATGTTTCTTCCGCAGCCAGGTGCAGCCTC...AAAGAGGTCCCTGATCCCCAAAGGGCCTGAACCTCTGCTCTGGATTGAAGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
3UTR-3UTR GCA 90 bp GGCTCTTGCTTTTCTGTAGTTTGCAGAAGTTCCTGTCCAGATCAGAGGAGGAGGAGGTGCAGGAGACACTaGACCAGCCCCACTGCAGGG +
Preference number: 2 (lower is better)
Translates to: GSCFSVVCRSSCPDQRRRRCRRH*TSPTAG
Trigger: CCCTGCAGTGGGGCTGGTGCAGTGTCTCCTGCACCT...CCTCCTCCTCTGATCTGGACAGGAACTTCTGCAAACTACAGAAAAGCAAGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR-3UTR GCA 90 bp CAAATTCCCTGGGGGTCAAGGACCATGTCCGTTCATCCTTGTGGCCAACATGATGGTGGGTGCTCTAGGTaGAGGAGACACTGCACCAGC +
Preference number: 2 (lower is better)
Translates to: QIPWGSRTMSVHPCGQHDGGCSR*RRHCTS
Trigger: GCTGGTGCAGTGTCTCCTGCACCTAGAGCACCCACC...ATCATGTTGGCCACAAGGATGAACGGACATGGTCCTTGACCCCCAGGGAATTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR-3UTR GCA 90 bp TACGGAAGTGCCTGGGTGGAGGATGGAGTGTTGCTTGGAACATTTATGAGAAGGCACAGGCACCCAGAATaGCATCGGGAGCCTGGCAGG +
Preference number: 2 (lower is better)
Translates to: YGSAWVEDGVLLGTFMRRHRHPE*HREPGR
Trigger: CCTGCCAGGCTCCCGATGGCATTCTGGGTGCCTGTG...CCTTCTCATAAATGTTCCAAGCAACACTCCATCCTCCACCCAGGCACTTCCGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR-3UTR CCA 90 bp AGGCTGAGAGATGAAATAACTTATTCAAGAGCTCAGTCAGGCGCAGTGGCTCACGAGGCCACAGGAGCCTaGGCTCCACCTGACCTGTGC +
Preference number: 2 (lower is better)
Translates to: RLRDEITYSRAQSGAVAHEATGA*APPDLC
Trigger: GCACAGGTCAGGTGGAGCCCAGGCTCCTGTGGCCTC...GTGAGCCACTGCGCCTGACTGAGCTCTTGAATAAGTTATTTCATCTCTCAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337827.8
3UTR-3UTR CCA 90 bp GACTTGCTCCTAAGCCCAGACCAAGCTGGACATTGTAGCCAAGGTGTATTCTCTCCGAGGGGACAGGCCTaGCTCACAGGGAAGGAGAGA +
Preference number: 2 (lower is better)
Translates to: DLLLSPDQAGHCSQGVFSPRGQA*LTGKER
Trigger: TCTCTCCTTCCCTGTGAGCCAGGCCTGTCCCCTCGG...AGAGAATACACCTTGGCTACAATGTCCAGCTTGGTCTGGGCTTAGGAGCAAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337827.8
3UTR-3UTR CCA 90 bp CAGACAGTGGCTTCAATCCAGAGCAGAGGTTCAGGCCCTTTGGGGATCAGGGACACTCAGGGATGTGTGTaGCTACCCGTCCTTTCAGTG +
Preference number: 2 (lower is better)
Translates to: QTVASIQSRGSGPLGIRDTQGCV*LPVLSV
Trigger: CACTGAAAGGACGGGTAGCCACACACATCCCTGAGT...GTCCCTGATCCCCAAAGGGCCTGAACCTCTGCTCTGGATTGAAGCCACTGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448469.8
3UTR-3UTR CCA 90 bp GGCTCTTGCTTTTCTGTAGTTTGCAGAAGTTCCTGTCCAGATCAGAGGAGGAGGTGCTGGAGCAGCCTCTaGGCCTTGGGTCCCATTCCC +
Preference number: 2 (lower is better)
Translates to: GSCFSVVCRSSCPDQRRRCWSSL*ALGPIP
Trigger: GGGAATGGGACCCAAGGCCCAGAGGCTGCTCCAGCA...CCTCCTCCTCTGATCTGGACAGGAACTTCTGCAAACTACAGAAAAGCAAGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR-3UTR CCA 90 bp GCCCTCTGCCTTAGATGGGGCTCTTGTTCTGCAGGTCACCATAGTTCCTGCCTGAGAAGGCATTGGCAGTaGGATAGCTGGCTCATCCTG +
Preference number: 2 (lower is better)
Translates to: ALCLRWGSCSAGHHSSCLRRHWQ*DSWLIL
Trigger: CAGGATGAGCCAGCTATCCCACTGCCAATGCCTTCT...CAGGCAGGAACTATGGTGACCTGCAGAACAAGAGCCCCATCTAAGGCAGAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR-3UTR CCA 90 bp GGGAGACTGGAGGTCTCGCATCACAGAGTCATGCAGGGGCTCCTGGTCAGTGCCCAGGCCACTCAATTCTaGGCTTGTCTGAGAAACAAT +
Preference number: 2 (lower is better)
Translates to: GRLEVSHHRVMQGLLVSAQATQF*ACLRNN
Trigger: ATTGTTTCTCAGACAAGCCCAGAATTGAGTGGCCTG...GGCACTGACCAGGAGCCCCTGCATGACTCTGTGATGCGAGACCTCCAGTCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR-3UTR TCA 90 bp CAGGGCTGCGTTGCCACAAAGGACCGGCTGATAAGTGCAGAGCCTGATCTGACCGTCAAAAATGACAAATaGGGCTGGGACTACTCAGGG +
Preference number: 2 (lower is better)
Translates to: QGCVATKDRLISAEPDLTVKNDK*GWDYSG
Trigger: CCCTGAGTAGTCCCAGCCTCATTTGTCATTTTTGAC...GGTCAGATCAGGCTCTGCACTTATCAGCCGGTCCTTTGTGGCAACGCAGCCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448469.8
3UTR-3UTR GCA 90 bp TCTGGTCAGCAGTCCTCTTACATTCAACAGGCGCAGCCCCGGCTCCCCAGCCCCGTTCTTTTGGTGCTTTaGTGCTCTTCTATCCATGTT +
Preference number: 2 (lower is better)
Translates to: SGQQSSYIQQAQPRLPSPVLLVL*CSSIHV
Trigger: AACATGGATAGAAGAGCAGCAAAGCACCAAAAGAAC...GGGGCTGGGGAGCCGGGGCTGCGCCTGTTGAATGTAAGAGGACTGCTGACCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000448469.8
3UTR-3UTR GCA 90 bp CACCCCCTAGTGGGAAGCTGCCTTCTTTGTAGGGATGAAGTGTGGGGCCAGCAGCAATGGAAAAAGCAGTaGTCACGTGAGGCTGGTCAT +
Preference number: 2 (lower is better)
Translates to: HPLVGSCLLCRDEVWGQQQWKKQ*SREAGH
Trigger: ATGACCAGCCTCACGTGAGCACTGCTTTTTCCATTG...CTGCTGGCCCCACACTTCATCCCTACAAAGAAGGCAGCTTCCCACTAGGGGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR-3UTR GCA 90 bp CAATCTCAGGGCTTCTTGACTCTCCAGGCCACTCAATTCTGGGCTTGTCTGAGAGTGGGCTCAAGGATTTaGCCTCAGAGAGGTGGGTGC +
Preference number: 2 (lower is better)
Translates to: QSQGFLTLQATQFWACLRVGSRI*PQRGGC
Trigger: GCACCCACCTCTCTGAGGGCAAATCCTTGAGCCCAC...TCTCAGACAAGCCCAGAATTGAGTGGCCTGGAGAGTCAAGAAGCCCTGAGATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR-3UTR CCA 90 bp GAGTGCTGCCGAGAGGACGCTGGTGAGAGTCAGGAGGCGAAACTGCTGGAGAGCGCTGTGAAAAGGAACTaGGAGTTCTCTTCACAAACA +
Preference number: 2 (lower is better)
Translates to: ECCREDAGESQEAKLLESAVKRN*EFSSQT
Trigger: TGTTTGTGAAGAGAACTCCCAGTTCCTTTTCACAGC...GCTCTCCAGCAGTTTCGCCTCCTGACTCTCACCAGCGTCCTCTCGGCAGCACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
3UTR-3UTR CCA 90 bp AATTGTCCTCAGATGGCTCTGGAGCCTCAGTCCAGGTCGGCTACTCAGACAGCCAGGGGTCAGAAGTTCTaGGTAACTCCAGATCAGCAG +
Preference number: 2 (lower is better)
Translates to: NCPQMALEPQSRSATQTARGQKF*VTPDQQ
Trigger: CTGCTGATCTGGAGTTACCCAGAACTTCTGACCCCT...GGCTGTCTGAGTAGCCGACCTGGACTGAGGCTCCAGAGCCATCTGAGGACAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337827.8
3UTR-3UTR CCA 90 bp CCTCTTGAAGGCCCTCTGGTCAGCAGTCCTCTTACATTCAACAGGCGCAGCCCCGAACGTGTGTCATGGTaGGTATTTGCTGATGGTCCT +
Preference number: 2 (lower is better)
Translates to: PLEGPLVSSPLTFNRRSPERVSW*VFADGP
Trigger: AGGACCATCAGCAAATACCCACCATGACACACGTTC...GGGGCTGCGCCTGTTGAATGTAAGAGGACTGCTGACCAGAGGGCCTTCAAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448469.8
3UTR-3UTR CCA 90 bp CTGCAGGTCACCATAGTTCCTGCCTGGTCCCGACTTTTCTCCTATTGGGGTTTTCAGCTGGAGAGAGTATaGCCATCCTCACCCCAGGGA +
Preference number: 2 (lower is better)
Translates to: LQVTIVPAWSRLFSYWGFQLERV*PSSPQG
Trigger: TCCCTGGGGTGAGGATGGCCATACTCTCTCCAGCTG...AAAACCCCAATAGGAGAAAAGTCGGGACCAGGCAGGAACTATGGTGACCTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR-3UTR CCA 90 bp CTGCAGGTCACCATAGTTCCTGCCTGGTCCCGACTTTTCTCCTATTGGGGTTTTGTGCTTGTGACCATGTaGAGGAAGCCCAGAGGGCTC +
Preference number: 2 (lower is better)
Translates to: LQVTIVPAWSRLFSYWGFVLVTM*RKPRGL
Trigger: GAGCCCTCTGGGCTTCCTCCACATGGTCACAAGCAC...AAAACCCCAATAGGAGAAAAGTCGGGACCAGGCAGGAACTATGGTGACCTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR CAA 90 bp ATGGAGGCCGACGAGCAAGCTACCAGGTGCAGGACAGGGCTAGACTaGAGCATGTTCAGTTTCACTTTTACAGAAAGGAGGCCCGGACTT +
Preference number: 2 (lower is better)
Translates to: MEADEQATRCRTGLD*SMFSFTFTERRPGL
Trigger: AAGTCCGGGCCTCCTTTCTGTAAAAGTGAAACTGAACATGCTCAAGTCTAGCCCTGTCCTGCACCTGGTAGCTTGCTCGTCGGCCTCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337827.8
3UTR CAA 90 bp GTGGATGGGGGAATGGAGGCTGCAGCCAAGGTCTTTTACAGTGACTaGCTCCTAAGCCCAGACCAAGCTGGACATTGTAGCCAAGGTGTA +
Preference number: 2 (lower is better)
Translates to: VDGGMEAAAKVFYSD*LLSPDQAGHCSQGV
Trigger: TACACCTTGGCTACAATGTCCAGCTTGGTCTGGGCTTAGGAGCAAGTCACTGTAAAAGACCTTGGCTGCAGCCTCCATTCCCCCATCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337827.8
3UTR-3UTR TCA 90 bp GCAGGGTGTGGGGATAGCAGGAGCAGTTCCAAGACAAGGCCGTGGGGTAGATGTCCCATGATGCTGTATTaGCAGAGGCAAAAACCTTTG +
Preference number: 2 (lower is better)
Translates to: AGCGDSRSSSKTRPWGRCPMMLY*QRQKPL
Trigger: CAAAGGTTTTTGCCTCTGTCAATACAGCATCATGGG...ACATCTACCCCACGGCCTTGTCTTGGAACTGCTCCTGCTATCCCCACACCCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000448469.8
3UTR-3UTR TCA 90 bp GGGAGACTGGAGGTCTCGCATCACAGAGTCATGCAGGGGCTCCTGGTCAGTGCCCCCTTCTCAGCTGTGTaGTCTGACATATATTCTTTA +
Preference number: 2 (lower is better)
Translates to: GRLEVSHHRVMQGLLVSAPFSAV*SDIYSL
Trigger: TAAAGAATATATGTCAGATCACACAGCTGAGAAGGG...GGCACTGACCAGGAGCCCCTGCATGACTCTGTGATGCGAGACCTCCAGTCTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR-3UTR GCA 90 bp CAATCTCAGGGCTTCTTGACTCTCCAGGCCACTCAATTCTGGGCTTGTCTGAGAAGAACAGGGCTGCGTTaGCACAAAGGACCGGCTGAT +
Preference number: 2 (lower is better)
Translates to: QSQGFLTLQATQFWACLRRTGLR*HKGPAD
Trigger: ATCAGCCGGTCCTTTGTGGCAACGCAGCCCTGTTCT...TCTCAGACAAGCCCAGAATTGAGTGGCCTGGAGAGTCAAGAAGCCCTGAGATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR-3UTR GCA 90 bp CAGTCATGCCCCTCATTTAAATCAGGCTGTGTGTTCCTATGTAAGAGGCTGCCCGGCTCCCAGTGGGAATaGAAGGACGTGATGGGTAGG +
Preference number: 2 (lower is better)
Translates to: QSCPSFKSGCVFLCKRLPGSQWE*KDVMGR
Trigger: CCTACCCATCACGTCCTTGCATTCCCACTGGGAGCC...GGGCAGCCTCTTACATAGGAACACACAGCCTGATTTAAATGAGGGGCATGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR-3UTR CCA 90 bp TACGGAAGTGCCTGGGTGGAGGATGGAGTGTTGCTTGGAACATTTATGAGAAGGGTCCAGCAAGTGGGCTaGGCACACAGATCCCTCAGA +
Preference number: 2 (lower is better)
Translates to: YGSAWVEDGVLLGTFMRRVQQVG*AHRSLR
Trigger: TCTGAGGGATCTGTGTGCCCAGCCCACTTGCTGGAC...CCTTCTCATAAATGTTCCAAGCAACACTCCATCCTCCACCCAGGCACTTCCGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR CAA 90 bp AGCTGGAGAGAGTATGGCCATCCTCACCCCAGGGAGTCGTGGTGCTaGGAGCTACCTCAGCATCTAGCCTTCTGTAATATAGTGTCTTAC +
Preference number: 2 (lower is better)
Translates to: SWREYGHPHPRESWC*ELPQHLAFCNIVSY
Trigger: GTAAGACACTATATTACAGAAGGCTAGATGCTGAGGTAGCTCCAAGCACCACGACTCCCTGGGGTGAGGATGGCCATACTCTCTCCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR CAA 90 bp GCTCCTGTAGAACATTACGGAAGTGCCTGGGTGGAGGATGGAGTGTaGCTTGGAACATTTATGAGAAGGGATGAGAGGCAGAGACCCAGG +
Preference number: 2 (lower is better)
Translates to: APVEHYGSAWVEDGV*LGTFMRRDERQRPR
Trigger: CCTGGGTCTCTGCCTCTCATCCCTTCTCATAAATGTTCCAAGCAACACTCCATCCTCCACCCAGGCACTTCCGTAATGTTCTACAGGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR-3UTR TCA 90 bp TGGAGTCTGTTTAATAAACTACGCCCGAATCTTCCCCTAAAGATCCCTCTGCAGCCGAGAGGACGCTGGTaGGAGTCAGGAGGCGAAACT +
Preference number: 2 (lower is better)
Translates to: WSLFNKLRPNLPLKIPLQPRGRW*ESGGET
Trigger: AGTTTCGCCTCCTGACTCTCACCAGCGTCCTCTCGG...CTGCAGAGGGATCTTTAGGGGAAGATTCGGGCGTAGTTTATTAAACAGACTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448469.8
3UTR-3UTR TCA 90 bp CAGACAGTGGCTTCAATCCAGAGCAGAGGTTCAGGCCCTTTGGGGATCAGGGACAGCAGGAGTCAAAAATaGCAAATGAGGCTGGGACTA +
Preference number: 2 (lower is better)
Translates to: QTVASIQSRGSGPLGIRDSRSQK*QMRLGL
Trigger: TAGTCCCAGCCTCATTTGTCATTTTTGACTCCTGCT...GTCCCTGATCCCCAAAGGGCCTGAACCTCTGCTCTGGATTGAAGCCACTGTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448469.8
3UTR-3UTR TCA 90 bp TACGGAAGTGCCTGGGTGGAGGATGGAGTGTTGCTTGGAACATTTATGAGAAGGGGGCCTAGAAGTCACTaGCCTGGGTTTGAATCCCAG +
Preference number: 2 (lower is better)
Translates to: YGSAWVEDGVLLGTFMRRGPRSH*PGFESQ
Trigger: CTGGGATTCAAACCCAGGTCAGTGACTTCTAGGCCC...CCTTCTCATAAATGTTCCAAGCAACACTCCATCCTCCACCCAGGCACTTCCGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR-3UTR TCA 90 bp CAAATTCCCTGGGGGTCAAGGACCATGTCCGTTCATCCTTGTGGCCAACATGATTGTACCCTGAGCAAGTaGCTCCACCTCTCTGTGCAT +
Preference number: 2 (lower is better)
Translates to: QIPWGSRTMSVHPCGQHDCTLSK*LHLSVH
Trigger: ATGCACAGAGAGGTGGAGTCACTTGCTCAGGGTACA...ATCATGTTGGCCACAAGGATGAACGGACATGGTCCTTGACCCCCAGGGAATTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR-3UTR CCA 90 bp GTGCCTGGCAGTGAAGACCTCTTCCCATTAGAGAAGCTGGCTGGGTTGCCCCCTGCTGTGAAAAGGAACTaGGAGTTCTCTTCACAAACA +
Preference number: 2 (lower is better)
Translates to: VPGSEDLFPLEKLAGLPPAVKRN*EFSSQT
Trigger: TGTTTGTGAAGAGAACTCCCAGTTCCTTTTCACAGC...AGGGGGCAACCCAGCCAGCTTCTCTAATGGGAAGAGGTCTTCACTGCCAGGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337827.8
3UTR-3UTR CCA 90 bp GTGCCTGGCAGTGAAGACCTCTTCCCATTAGAGAAGCTGGCTGGGTTGCCCCCTCCAATCAAGCAAAGCTaGTCTGGTAAGACTCTTTTC +
Preference number: 2 (lower is better)
Translates to: VPGSEDLFPLEKLAGLPPPIKQS*SGKTLF
Trigger: GAAAAGAGTCTTACCAGACCAGCTTTGCTTGATTGG...AGGGGGCAACCCAGCCAGCTTCTCTAATGGGAAGAGGTCTTCACTGCCAGGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337827.8
3UTR-3UTR CCA 90 bp CTGCAGGTCACCATAGTTCCTGCCTGGTCCCGACTTTTCTCCTATTGGGGTTTTGATTCCAGAAGGCATTaGCAGTGGGATAGCTGGCTC +
Preference number: 2 (lower is better)
Translates to: LQVTIVPAWSRLFSYWGFDSRRH*QWDSWL
Trigger: GAGCCAGCTATCCCACTGCCAATGCCTTCTGGAATC...AAAACCCCAATAGGAGAAAAGTCGGGACCAGGCAGGAACTATGGTGACCTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR-3UTR TCA 90 bp TTTTTACCCAGGAAGTATGTCCTGCCTGAATTTGTACCACTGCCTTCTTGTGTGCCGAGAGGACGCTGGTaGGAGTCAGGAGGCGAAACT +
Preference number: 2 (lower is better)
Translates to: FLPRKYVLPEFVPLPSCVPRGRW*ESGGET
Trigger: AGTTTCGCCTCCTGACTCTCACCAGCGTCCTCTCGG...CACACAAGAAGGCAGTGGTACAAATTCAGGCAGGACATACTTCCTGGGTAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337827.8
3UTR-3UTR GCA 90 bp CTGTTTAATAAACTACGCCCGAATCTTCCCCTAAAGATCCCTCTGCAGCCTCTTCCTCTCCATCCATGCTaGCCAATTTCCCCTGGCCCT +
Preference number: 2 (lower is better)
Translates to: LFNKLRPNLPLKIPLQPLPLHPC*PISPGP
Trigger: AGGGCCAGGGGAAATTGGGCAGCATGGATGGAGAGG...AAGAGGCTGCAGAGGGATCTTTAGGGGAAGATTCGGGCGTAGTTTATTAAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448469.8
3UTR-3UTR GCA 90 bp GGCTCTTGCTTTTCTGTAGTTTGCAGAAGTTCCTGTCCAGATCAGAGGAGGAGGCTATTTGCCTCCCATTaGAACCACCTCCCCTCTTCC +
Preference number: 2 (lower is better)
Translates to: GSCFSVVCRSSCPDQRRRLFASH*NHLPSS
Trigger: GGAAGAGGGGAGGTGGTTGCAATGGGAGGCAAATAG...CCTCCTCCTCTGATCTGGACAGGAACTTCTGCAAACTACAGAAAAGCAAGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR-3UTR CCA 90 bp AGGACAGGGCTAGACTTGAGCATGTTCAGTTTCACTTTTACAGAAAGGAGGCCCAGACCCCCAGGGTCCTaGTACCAACAGTCATTTGCC +
Preference number: 2 (lower is better)
Translates to: RTGLDLSMFSFTFTERRPRPPGS*YQQSFA
Trigger: GGCAAATGACTGTTGGTACCAGGACCCTGGGGGTCT...GGGCCTCCTTTCTGTAAAAGTGAAACTGAACATGCTCAAGTCTAGCCCTGTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337827.8
3UTR-3UTR CCA 90 bp TGGAGTCTGTTTAATAAACTACGCCCGAATCTTCCCCTAAAGATCCCTCTGCAGGGGGCTGGTAAAGTGTaGAAGGGACTGTGTCCTGGG +
Preference number: 2 (lower is better)
Translates to: WSLFNKLRPNLPLKIPLQGAGKV*KGLCPG
Trigger: CCCAGGACACAGTCCCTTCCACACTTTACCAGCCCC...CTGCAGAGGGATCTTTAGGGGAAGATTCGGGCGTAGTTTATTAAACAGACTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448469.8
3UTR CAA 90 bp AAACAATGTCACATCACCCACTGTCCCATCTCCACATCTTGGTTCTaGCGGATTCCTTGTGAGGTAAGCAGGGGAGGGAGCCCCTTATTT +
Preference number: 2 (lower is better)
Translates to: KQCHITHCPISTSWF*RIPCEVSRGGSPLF
Trigger: AAATAAGGGGCTCCCTCCCCTGCTTACCTCACAAGGAATCCGCAAGAACCAAGATGTGGAGATGGGACAGTGGGTGATGTGACATTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR CAA 90 bp ACAATCTCAGGGCTTCTTGACTCTCCAGGCCACTCAATTCTGGGCTaGTCTGAGAAACAATGTCACATCACCCACTGTCCCATCTCCACA +
Preference number: 2 (lower is better)
Translates to: TISGLLDSPGHSILG*SEKQCHITHCPIST
Trigger: TGTGGAGATGGGACAGTGGGTGATGTGACATTGTTTCTCAGACAAGCCCAGAATTGAGTGGCCTGGAGAGTCAAGAAGCCCTGAGATTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR-3UTR TCA 90 bp CACCCCCTAGTGGGAAGCTGCCTTCTTTGTAGGGATGAAGTGTGGGGCCAGCAGCTCAGCTGTGTGATCTaGCATATATTCTTTAGATTC +
Preference number: 2 (lower is better)
Translates to: HPLVGSCLLCRDEVWGQQLSCVI*HIFFRF
Trigger: GAATCTAAAGAATATATGTCAGATCACACAGCTGAG...CTGCTGGCCCCACACTTCATCCCTACAAAGAAGGCAGCTTCCCACTAGGGGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR-3UTR GCA 90 bp ACATGTAAGAAGTGGTTTTATTCCAGGTGTGTGTTTCATAAAGACGAGGTCCTCGCAAGTCCAGAGGGGTaGACTTGGGCACGGGAGTGC +
Preference number: 2 (lower is better)
Translates to: TCKKWFYSRCVFHKDEVLASPEG*TWAREC
Trigger: GCACTCCCGTGCCCAAGTGCACCCCTCTGGACTTGC...GAGGACCTCGTCTTTATGAAACACACACCTGGAATAAAACCACTTCTTACATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
3UTR-3UTR GCA 90 bp CCTGGCTGCGGAAGAAACATCACGACAGAGGACAGGCAAAGCATGGCCCTGGGACTATCCATGTTCATTTaGAAATTACCCATCCTTTGC +
Preference number: 2 (lower is better)
Translates to: PGCGRNITTEDRQSMALGLSMFI*KLPILC
Trigger: GCAAAGGATGGGTAATTTGCAAATGAACATGGATAG...TCCCAGGGCCATGCTTTGCCTGTCCTCTGTCGTGATGTTTCTTCCGCAGCCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448469.8
3UTR-3UTR GCA 90 bp CTGCAGGTCACCATAGTTCCTGCCTGGTCCCGACTTTTCTCCTATTGGGGTTTTCCAATCATTAGGAAGTaGTCCCCAAACAGCGGGATT +
Preference number: 2 (lower is better)
Translates to: LQVTIVPAWSRLFSYWGFPIIRK*SPNSGI
Trigger: AATCCCGCTGTTTGGGGAGCACTTCCTAATGATTGG...AAAACCCCAATAGGAGAAAAGTCGGGACCAGGCAGGAACTATGGTGACCTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR-3UTR CCA 90 bp TACGGAAGTGCCTGGGTGGAGGATGGAGTGTTGCTTGGAACATTTATGAGAAGGAGAGGGGCAATTGAGTaGAGGCTTTGCTCGGAGATA +
Preference number: 2 (lower is better)
Translates to: YGSAWVEDGVLLGTFMRRRGAIE*RLCSEI
Trigger: TATCTCCGAGCAAAGCCTCCACTCAATTGCCCCTCT...CCTTCTCATAAATGTTCCAAGCAACACTCCATCCTCCACCCAGGCACTTCCGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR-3UTR CCA 90 bp CAAATTCCCTGGGGGTCAAGGACCATGTCCGTTCATCCTTGTGGCCAACATGATCCCATCTCCACATCTTaGTTCTTGCGGATTCCTTGT +
Preference number: 2 (lower is better)
Translates to: QIPWGSRTMSVHPCGQHDPISTS*FLRIPC
Trigger: ACAAGGAATCCGCAAGAACCAAGATGTGGAGATGGG...ATCATGTTGGCCACAAGGATGAACGGACATGGTCCTTGACCCCCAGGGAATTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR-3UTR CCA 90 bp GGCTCTTGCTTTTCTGTAGTTTGCAGAAGTTCCTGTCCAGATCAGAGGAGGAGGGATCTGTACATTCTCTaGCACAAGGTAGGCACCCAG +
Preference number: 2 (lower is better)
Translates to: GSCFSVVCRSSCPDQRRRDLYIL*HKVGTQ
Trigger: CTGGGTGCCTACCTTGTGCCAGAGAATGTACAGATC...CCTCCTCCTCTGATCTGGACAGGAACTTCTGCAAACTACAGAAAAGCAAGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR-3UTR TCA 90 bp AGGCTGAGAGATGAAATAACTTATTCAAGAGCTCAGTCAGGCGCAGTGGCTCACCTAAGTGCCTGGCAGTaGAGACCTCTTCCCATTAGA +
Preference number: 2 (lower is better)
Translates to: RLRDEITYSRAQSGAVAHLSAWQ*RPLPIR
Trigger: TCTAATGGGAAGAGGTCTTCACTGCCAGGCACTTAG...GTGAGCCACTGCGCCTGACTGAGCTCTTGAATAAGTTATTTCATCTCTCAGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337827.8
3UTR-3UTR GCA 90 bp GGCTCTTGCTTTTCTGTAGTTTGCAGAAGTTCCTGTCCAGATCAGAGGAGGAGGAGCTTGGTTGCCACGTaGAAATCTGCATTTCCAGCT +
Preference number: 2 (lower is better)
Translates to: GSCFSVVCRSSCPDQRRRSLVAT*KSAFPA
Trigger: AGCTGGAAATGCAGATTTGCACGTGGCAACCAAGCT...CCTCCTCCTCTGATCTGGACAGGAACTTCTGCAAACTACAGAAAAGCAAGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR-3UTR CCA 90 bp CAATCTCAGGGCTTCTTGACTCTCCAGGCCACTCAATTCTGGGCTTGTCTGAGAAGAGTGTCGGATCAATaGAAAAAGCAGTGCTCACGT +
Preference number: 2 (lower is better)
Translates to: QSQGFLTLQATQFWACLRRVSDQ*KKQCSR
Trigger: ACGTGAGCACTGCTTTTTCCATTGATCCGACACTCT...TCTCAGACAAGCCCAGAATTGAGTGGCCTGGAGAGTCAAGAAGCCCTGAGATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR-3UTR CCA 90 bp CAGTCATGCCCCTCATTTAAATCAGGCTGTGTGTTCCTATGTAAGAGGCTGCCCTTAGTGGTGACAGTGTaGGTGAGAGTGTCGGATCAA +
Preference number: 2 (lower is better)
Translates to: QSCPSFKSGCVFLCKRLPLVVTV*VRVSDQ
Trigger: TTGATCCGACACTCTCACCCACACTGTCACCACTAA...GGGCAGCCTCTTACATAGGAACACACAGCCTGATTTAAATGAGGGGCATGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR-3UTR TCA 90 bp ACATGTAAGAAGTGGTTTTATTCCAGGTGTGTGTTTCATAAAGACGAGGTCCTCCACAGCTGGGCCTCATaGCCCAAAAGACCCCTGTGT +
Preference number: 2 (lower is better)
Translates to: TCKKWFYSRCVFHKDEVLHSWAS*PKRPLC
Trigger: ACACAGGGGTCTTTTGGGTCATGAGGCCCAGCTGTG...GAGGACCTCGTCTTTATGAAACACACACCTGGAATAAAACCACTTCTTACATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000448469.8
3UTR-3UTR GCA 90 bp AGGCTGAGAGATGAAATAACTTATTCAAGAGCTCAGTCAGGCGCAGTGGCTCACAAAGGAAGGCGCTGGTaGATGTGGACATGTAAGAAG +
Preference number: 2 (lower is better)
Translates to: RLRDEITYSRAQSGAVAHKGRRW*MWTCKK
Trigger: CTTCTTACATGTCCACATGCACCAGCGCCTTCCTTT...GTGAGCCACTGCGCCTGACTGAGCTCTTGAATAAGTTATTTCATCTCTCAGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337827.8
3UTR-3UTR GCA 90 bp TACGGAAGTGCCTGGGTGGAGGATGGAGTGTTGCTTGGAACATTTATGAGAAGGATTGAGTGGAGGCTTTaGTCGGAGATAATTCCTCAG +
Preference number: 2 (lower is better)
Translates to: YGSAWVEDGVLLGTFMRRIEWRL*SEIIPQ
Trigger: CTGAGGAATTATCTCCGAGCAAAGCCTCCACTCAAT...CCTTCTCATAAATGTTCCAAGCAACACTCCATCCTCCACCCAGGCACTTCCGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR-3UTR CCA 90 bp GAGAGGTCTCAGCCTGACACATGGCCAAATAGAAGTGGAGTCTGTTTAATAAACAGCTTGGGCAGACAGTaGCTTCAATCCAGAGCAGAG +
Preference number: 2 (lower is better)
Translates to: ERSQPDTWPNRSGVCLINSLGRQ*LQSRAE
Trigger: CTCTGCTCTGGATTGAAGCCACTGTCTGCCCAAGCT...GTTTATTAAACAGACTCCACTTCTATTTGGCCATGTGTCAGGCTGAGACCTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448469.8
3UTR-3UTR CCA 90 bp GAGAGGTCTCAGCCTGACACATGGCCAAATAGAAGTGGAGTCTGTTTAATAAACCTCTTGCTAAGAATGTaGGCACCCACAGGCACAGGA +
Preference number: 2 (lower is better)
Translates to: ERSQPDTWPNRSGVCLINLLLRM*APTGTG
Trigger: TCCTGTGCCTGTGGGTGCCCACATTCTTAGCAAGAG...GTTTATTAAACAGACTCCACTTCTATTTGGCCATGTGTCAGGCTGAGACCTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448469.8
3UTR-3UTR CCA 90 bp CAATCTCAGGGCTTCTTGACTCTCCAGGCCACTCAATTCTGGGCTTGTCTGAGACATGGGCAGAATAATTaGCTTGACCTAGATGTAGAC +
Preference number: 2 (lower is better)
Translates to: QSQGFLTLQATQFWACLRHGQNN*LDLDVD
Trigger: GTCTACATCTAGGTCAAGCCAATTATTCTGCCCATG...TCTCAGACAAGCCCAGAATTGAGTGGCCTGGAGAGTCAAGAAGCCCTGAGATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR-3UTR CCA 90 bp TACGGAAGTGCCTGGGTGGAGGATGGAGTGTTGCTTGGAACATTTATGAGAAGGCACTTATTTGAACTGTaGTGGTTGTCAGGAGCTAGG +
Preference number: 2 (lower is better)
Translates to: YGSAWVEDGVLLGTFMRRHLFEL*WLSGAR
Trigger: CCTAGCTCCTGACAACCACCACAGTTCAAATAAGTG...CCTTCTCATAAATGTTCCAAGCAACACTCCATCCTCCACCCAGGCACTTCCGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR CAA 90 bp GACCTTGTTCTTTTGGTGCTTTGCTGCTCTTCTATCCATGTTCATTaGCAAATTACCCATCCTTTGCTGCCAAGACACCATCCGTCCCCA +
Preference number: 2 (lower is better)
Translates to: DLVLLVLCCSSIHVH*QITHPLLPRHHPSP
Trigger: TGGGGACGGATGGTGTCTTGGCAGCAAAGGATGGGTAATTTGCAAATGAACATGGATAGAAGAGCAGCAAAGCACCAAAAGAACAAGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448469.8
3UTR-3UTR TCA 90 bp CAGTCATGCCCCTCATTTAAATCAGGCTGTGTGTTCCTATGTAAGAGGCTGCCCAAGCTAACACTTATTTaGACTGTGGTGGTTGTCAGG +
Preference number: 2 (lower is better)
Translates to: QSCPSFKSGCVFLCKRLPKLTLI*TVVVVR
Trigger: CCTGACAACCACCACAGTTCAAATAAGTGTTAGCTT...GGGCAGCCTCTTACATAGGAACACACAGCCTGATTTAAATGAGGGGCATGACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR-3UTR CCA 90 bp GTTCATCCTTGTGGCCAACATGATCTGTACATTCTCTGGCACAAGGTAGGCACCTTATTTGAACTGTGGTaGTTGTCAGGAGCTAGGGAT +
Preference number: 2 (lower is better)
Translates to: VHPCGQHDLYILWHKVGTLFELW*LSGARD
Trigger: ATCCCTAGCTCCTGACAACCACCACAGTTCAAATAA...GGTGCCTACCTTGTGCCAGAGAATGTACAGATCATGTTGGCCACAAGGATGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR-3UTR TCA 90 bp TTCTTTTGGTGCTTTGCTGCTCTTCTATCCATGTTCATTTGCAAATTACCCATCTGGATCCTTGGCCTATaGAAGACAGGGGGCTCCTGT +
Preference number: 2 (lower is better)
Translates to: FFWCFAALLSMFICKLPIWILGL*KTGGSC
Trigger: ACAGGAGCCCCCTGTCTTTCATAGGCCAAGGATCCA...GATGGGTAATTTGCAAATGAACATGGATAGAAGAGCAGCAAAGCACCAAAAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448469.8
3UTR-3UTR GCA 90 bp CTGTTTAATAAACTACGCCCGAATCTTCCCCTAAAGATCCCTCTGCAGCCTCTTAAATTACCCATCCTTTaGTGCCAAGACACCATCCGT +
Preference number: 2 (lower is better)
Translates to: LFNKLRPNLPLKIPLQPLKLPIL*CQDTIR
Trigger: ACGGATGGTGTCTTGGCAGCAAAGGATGGGTAATTT...AAGAGGCTGCAGAGGGATCTTTAGGGGAAGATTCGGGCGTAGTTTATTAAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448469.8
3UTR-3UTR GCA 90 bp TGGAGTCTGTTTAATAAACTACGCCCGAATCTTCCCCTAAAGATCCCTCTGCAGACCTTGTTCTTTTGGTaGTTTGCTGCTCTTCTATCC +
Preference number: 2 (lower is better)
Translates to: WSLFNKLRPNLPLKIPLQTLFFW*FAALLS
Trigger: GGATAGAAGAGCAGCAAAGCACCAAAAGAACAAGGT...CTGCAGAGGGATCTTTAGGGGAAGATTCGGGCGTAGTTTATTAAACAGACTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448469.8
3UTR-3UTR GCA 90 bp ACATGTAAGAAGTGGTTTTATTCCAGGTGTGTGTTTCATAAAGACGAGGTCCTCGACTCCACCTCTCTGTaGATCACTTTCTTCCTTGAC +
Preference number: 2 (lower is better)
Translates to: TCKKWFYSRCVFHKDEVLDSTSL*ITFFLD
Trigger: GTCAAGGAAGAAAGTGATGCACAGAGAGGTGGAGTC...GAGGACCTCGTCTTTATGAAACACACACCTGGAATAAAACCACTTCTTACATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR-3UTR GCA 90 bp TTTTTACCCAGGAAGTATGTCCTGCCTGAATTTGTACCACTGCCTTCTTGTGTGTTTGGAGAAGCAATTTaGTTTCCATTTCTAAGCCCC +
Preference number: 2 (lower is better)
Translates to: FLPRKYVLPEFVPLPSCVFGEAI*FPFLSP
Trigger: GGGGCTTAGAAATGGAAAGCAAATTGCTTCTCCAAA...CACACAAGAAGGCAGTGGTACAAATTCAGGCAGGACATACTTCCTGGGTAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337827.8
3UTR-3UTR CCA 90 bp ACATGTAAGAAGTGGTTTTATTCCAGGTGTGTGTTTCATAAAGACGAGGTCCTCACATCTACTATGTGCTaGGTTAAGACTGTGGGCCTA +
Preference number: 2 (lower is better)
Translates to: TCKKWFYSRCVFHKDEVLTSTMC*VKTVGL
Trigger: TAGGCCCACAGTCTTAACCCAGCACATAGTAGATGT...GAGGACCTCGTCTTTATGAAACACACACCTGGAATAAAACCACTTCTTACATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR CAA 90 bp CCAATCAAGCAAAGCTGGTCTGGTAAGACTCTTTTCAGAATTATTTaGCTGTTTTTACCCAGGAAGTATGTCCTGCCTGAATTTGTACCA +
Preference number: 2 (lower is better)
Translates to: PIKQSWSGKTLFRII*LFLPRKYVLPEFVP
Trigger: TGGTACAAATTCAGGCAGGACATACTTCCTGGGTAAAAACAGCAAAATAATTCTGAAAAGAGTCTTACCAGACCAGCTTTGCTTGATTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337827.8
3UTR GCA 72 bp CCTCAGAGAGGTGGGTGCTCTAGGTGCAGGAGACACTaGACCAGCCCCACTGCAGGGCAGGGCCGAGGGTGG +
Preference number: 3 (lower is better)
Translates to: PQRGGCSRCRRH*TSPTAGQGRGW
Trigger: CCACCCTCGGCCCTGCCCTGCAGTGGGGCTGGTGCAGTGTCTCCTGCACCTAGAGCACCCACCTCTCTGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR CCA 72 bp GGCAAAGCATGGCCCTGGGAGCGAAGGGGCCTGCGCTaGCAAGTCCAGAGGGGTGCACTTGGGCACGGGAGT +
Preference number: 3 (lower is better)
Translates to: GKAWPWERRGLR*QVQRGALGHGS
Trigger: ACTCCCGTGCCCAAGTGCACCCCTCTGGACTTGCCAGCGCAGGCCCCTTCGCTCCCAGGGCCATGCTTTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
3UTR-3UTR CAA 90 bp CGCTGGCAAGTCCAGAGGGGTGCACTTGGGCACGGGAGTGCTGCCGAGAGGACGTCTGGGGAGAGGCCTTaGCCCTGGGCCCAGTTCTGT +
Preference number: 3 (lower is better)
Translates to: RWQVQRGALGHGSAAERTSGERP*PWAQFC
Trigger: ACAGAACTGGGCCCAGGGCAAAGGCCTCTCCCCAGA...CGTCCTCTCGGCAGCACTCCCGTGCCCAAGTGCACCCCTCTGGACTTGCCAGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
3UTR GCA 72 bp CTGGCAAGTCCAGAGGGGTGCACTTGGGCACGGGAGTaGTGCCGAGAGGACGCTGGTGAGAGTCAGGAGGCG +
Preference number: 3 (lower is better)
Translates to: LASPEGCTWARE*CREDAGESQEA
Trigger: CGCCTCCTGACTCTCACCAGCGTCCTCTCGGCAGCACTCCCGTGCCCAAGTGCACCCCTCTGGACTTGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
3UTR GCA 72 bp GGAAGGCAGGGGCGGAGCCTGGGCTCCCAGTGGGAATaGAAGGACGTGATGGGTAGGGCTGAGACCCAGCCT +
Preference number: 3 (lower is better)
Translates to: GRQGRSLGSQWE*KDVMGRAETQP
Trigger: AGGCTGGGTCTCAGCCCTACCCATCACGTCCTTGCATTCCCACTGGGAGCCCAGGCTCCGCCCCTGCCTTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR CCA 72 bp AGCCCTCCAGAGCAGGTGCTGCGGACCACAGACACTTaGCTGCTGACCCCAAGGGCCGTGTGGAGGGAGCAG +
Preference number: 3 (lower is better)
Translates to: SPPEQVLRTTDT*LLTPRAVWREQ
Trigger: CTGCTCCCTCCACACGGCCCTTGGGGTCAGCAGCCAAGTGTCTGTGGTCCGCAGCACCTGCTCTGGAGGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
3UTR-3UTR CAA 90 bp CAGGTGCTGCGGACCACAGACACTTGGCTGCTGACCCCAAGGGCCGTGTGGAGGTCTGGGGAGAGGCCTTaGCCCTGGGCCCAGTTCTGT +
Preference number: 3 (lower is better)
Translates to: QVLRTTDTWLLTPRAVWRSGERP*PWAQFC
Trigger: ACAGAACTGGGCCCAGGGCAAAGGCCTCTCCCCAGA...CCTCCACACGGCCCTTGGGGTCAGCAGCCAAGTGTCTGTGGTCCGCAGCACCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
3UTR TCA 72 bp CCAAGGGCCGTGTGGAGGGAGCAGGCGATGGCAGTTTaGGCACGCCAGGGAGGAAGATTAGGGGGTGGCAGC +
Preference number: 3 (lower is better)
Translates to: PRAVWREQAMAV*ARQGGRLGGGS
Trigger: GCTGCCACCCCCTAATCTTCCTCCCTGGCGTGCTCAAACTGCCATCGCCTGCTCCCTCCACACGGCCCTTGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
3UTR TCA 72 bp CACTTGGGCACGGGAGTGCTGCCGAGAGGACGCTGGTaGGAGTCAGGAGGCGAAACTGCTGGAGAGCCCTCC +
Preference number: 3 (lower is better)
Translates to: HLGTGVLPRGRW*ESGGETAGEPS
Trigger: GGAGGGCTCTCCAGCAGTTTCGCCTCCTGACTCTCACCAGCGTCCTCTCGGCAGCACTCCCGTGCCCAAGTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
3UTR GCA 72 bp GCCCCACGGCAAAGTGGGGCTGAGGGCAGAAATGGTTaGGTCCAGGAGAGGCTAGTGGTGTGCTGGCCTGCC +
Preference number: 3 (lower is better)
Translates to: APRQSGAEGRNG*VQERLVVCWPA
Trigger: GGCAGGCCAGCACACCACTAGCCTCTCCTGGACGCAACCATTTCTGCCCTCAGCCCCACTTTGCCGTGGGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337827.8
3UTR CCA 72 bp TGGTCCAAGGCCTGCCCTTGCAGTAGGGCCACCTGTTaGCCCCCACCAGAGCAGTCAGGAGTTCCTGGGGCA +
Preference number: 3 (lower is better)
Translates to: WSKACPCSRATC*PPPEQSGVPGA
Trigger: TGCCCCAGGAACTCCTGACTGCTCTGGTGGGGGCCAACAGGTGGCCCTACTGCAAGGGCAGGCCTTGGACCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337827.8
3UTR-3UTR CAA 90 bp GAGAGGACGCTGGTGAGAGTCAGGAGGCGAAACTGCTGGAGAGCCCTCCAGAGCGCGGACCACAGACACTaGGCTGCTGACCCCAAGGGC +
Preference number: 3 (lower is better)
Translates to: ERTLVRVRRRNCWRALQSADHRH*AADPKG
Trigger: GCCCTTGGGGTCAGCAGCCAAGTGTCTGTGGTCCGC...GCTCTGGAGGGCTCTCCAGCAGTTTCGCCTCCTGACTCTCACCAGCGTCCTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
3UTR GCA 72 bp GCAAGTCCAGAGGGGTGCACTTGGGCACGGGAGTGCTaGCGAGAGGACGCTGGTGAGAGTCAGGAGGCGAAA +
Preference number: 3 (lower is better)
Translates to: ASPEGCTWAREC*REDAGESQEAK
Trigger: TTTCGCCTCCTGACTCTCACCAGCGTCCTCTCGGCAGCACTCCCGTGCCCAAGTGCACCCCTCTGGACTTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
3UTR CCA 72 bp CAGAGCAGTCAGGAGTTCCTGGGGCACCACAGGGCATaGAGGCCGACGAGCAAGCTACCAGGTGCAGGACAG +
Preference number: 3 (lower is better)
Translates to: QSSQEFLGHHRA*RPTSKLPGAGQ
Trigger: CTGTCCTGCACCTGGTAGCTTGCTCGTCGGCCTCCATGCCCTGTGGTGCCCCAGGAACTCCTGACTGCTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337827.8
3UTR CCA 72 bp GGGGACAGGCCTGGCTCACAGGGAAGGAGAGAGGGCTaGCTAAAGGCAAGCACGGCGGCAGGGCAATACCTA +
Preference number: 3 (lower is better)
Translates to: GDRPGSQGRREG*LKASTAAGQYL
Trigger: TAGGTATTGCCCTGCCGCCGTGCTTGCCTTTAGCCAGCCCTCTCTCCTTCCCTGTGAGCCAGGCCTGTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337827.8
3UTR CCA 72 bp TGGAGGTCTCGCATCACAGAGTCATGCAGGGGCTCCTaGTCAGTGCCTTCACCTCCTGGTGCCTCCCCGACC +
Preference number: 3 (lower is better)
Translates to: WRSRITESCRGS*SVPSPPGASPT
Trigger: GGTCGGGGAGGCACCAGGAGGTGAAGGCACTGACCAGGAGCCCCTGCATGACTCTGTGATGCGAGACCTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR-3UTR CAA 90 bp CCTGGCTGCGGAAGAAACATCACGACAGAGGACAGGCAAAGCATGGCCCTGGGATCCAGAGGGGTGCACTaGGGCACGGGAGTGCTGCCG +
Preference number: 3 (lower is better)
Translates to: PGCGRNITTEDRQSMALGSRGVH*GTGVLP
Trigger: CGGCAGCACTCCCGTGCCCAAGTGCACCCCTCTGGA...TCCCAGGGCCATGCTTTGCCTGTCCTCTGTCGTGATGTTTCTTCCGCAGCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
3UTR-3UTR CAA 90 bp GAGAAGCTGGCTGGGTTGCCCCCTCCTTCTGGAGGAGCACTGACTCAGACCATCCAGCCAGCTAGGGCTTaGCTCCAGGCTCCTCAGGCC +
Preference number: 3 (lower is better)
Translates to: EKLAGLPPPSGGALTQTIQPARA*LQAPQA
Trigger: GGCCTGAGGAGCCTGGAGCAAAGCCCTAGCTGGCTG...GATGGTCTGAGTCAGTGCTCCTCCAGAAGGAGGGGGCAACCCAGCCAGCTTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337827.8
3UTR-3UTR CAA 90 bp GTGCCTGGCAGTGAAGACCTCTTCCCATTAGAGAAGCTGGCTGGGTTGCCCCCTGCGGACCACAGACACTaGGCTGCTGACCCCAAGGGC +
Preference number: 3 (lower is better)
Translates to: VPGSEDLFPLEKLAGLPPADHRH*AADPKG
Trigger: GCCCTTGGGGTCAGCAGCCAAGTGTCTGTGGTCCGC...AGGGGGCAACCCAGCCAGCTTCTCTAATGGGAAGAGGTCTTCACTGCCAGGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337827.8
3UTR-3UTR CAA 90 bp CAGGTGCTGCGGACCACAGACACTTGGCTGCTGACCCCAAGGGCCGTGTGGAGGTGTGGGCTTCTGTCCTaGCTTTCTCCGGGCAACAAG +
Preference number: 3 (lower is better)
Translates to: QVLRTTDTWLLTPRAVWRCGLLS*LSPGNK
Trigger: CTTGTTGCCCGGAGAAAGCAAGGACAGAAGCCCACA...CCTCCACACGGCCCTTGGGGTCAGCAGCCAAGTGTCTGTGGTCCGCAGCACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448469.8
3UTR TCA 72 bp CCACCCAACCCAGTGCCACCCTGGGCTTGGCATCTCTaGCAGGTCACCGGGCTTCTCACCTCCTTCCTGTTC +
Preference number: 3 (lower is better)
Translates to: PPNPVPPWAWHL*QVTGLLTSFLF
Trigger: GAACAGGAAGGAGGTGAGAAGCCCGGTGACCTGTCAGAGATGCCAAGCCCAGGGTGGCACTGGGTTGGGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448469.8
3UTR GCA 72 bp TGCAGTGCTGGGAGACATCCCCCGCAGGCCTTGGGGTaGTGGAACCCTGGGACGACAGTCATATTGTCCAGG +
Preference number: 3 (lower is better)
Translates to: CSAGRHPPQALG*WNPGTTVILSR
Trigger: CCTGGACAATATGACTGTCGTCCCAGGGTTCCAGCACCCCAAGGCCTGCGGGGGATGTCTCCCAGCACTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337827.8
3UTR GCA 72 bp TGCAGGCCAAATCAGAGACCCAGGCACCCTCCTCACTaGTTGCACCGACTGAGGCAGGCTAGCCAGTGGCAG +
Preference number: 3 (lower is better)
Translates to: CRPNQRPRHPPH*LHRLRQASQWQ
Trigger: CTGCCACTGGCTAGCCTGCCTCAGTCGGTGCAAGCAGTGAGGAGGGTGCCTGGGTCTCTGATTTGGCCTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR CCA 72 bp GAAACATCACGACAGAGGACAGGCAAAGCATGGCCCTaGGAGCGAAGGGGCCTGCGCTGGCAAGTCCAGAGG +
Preference number: 3 (lower is better)
Translates to: ETSRQRTGKAWP*ERRGLRWQVQR
Trigger: CCTCTGGACTTGCCAGCGCAGGCCCCTTCGCTCCCAGGGCCATGCTTTGCCTGTCCTCTGTCGTGATGTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
3UTR CCA 72 bp CAGGAGCCTGGGCTCCACCTGACCTGTGCTGATTCCTaGTTTTGGTCCAAGGCCTGCCCTTGCAGTAGGGCC +
Preference number: 3 (lower is better)
Translates to: QEPGLHLTCADS*FWSKACPCSRA
Trigger: GGCCCTACTGCAAGGGCAGGCCTTGGACCAAAACCAGGAATCAGCACAGGTCAGGTGGAGCCCAGGCTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337827.8
3UTR CCA 72 bp CCCCATGCAGTGCTGGGAGACATCCCCCGCAGGCCTTaGGGTGCTGGAACCCTGGGACGACAGTCATATTGT +
Preference number: 3 (lower is better)
Translates to: PHAVLGDIPRRP*GAGTLGRQSYC
Trigger: ACAATATGACTGTCGTCCCAGGGTTCCAGCACCCCAAGGCCTGCGGGGGATGTCTCCCAGCACTGCATGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337827.8
3UTR-3UTR CAA 90 bp GCAGGGTGTGGGGATAGCAGGAGCAGTTCCAAGACAAGGCCGTGGGGTAGATGTGCAGGCGATGGCAGTTaGAGCACGCCAGGGAGGAAG +
Preference number: 3 (lower is better)
Translates to: AGCGDSRSSSKTRPWGRCAGDGS*STPGRK
Trigger: CTTCCTCCCTGGCGTGCTCAAACTGCCATCGCCTGC...ACATCTACCCCACGGCCTTGTCTTGGAACTGCTCCTGCTATCCCCACACCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
3UTR-3UTR CAA 90 bp CAGGGCTGCGTTGCCACAAAGGACCGGCTGATAAGTGCAGAGCCTGATCTGACCGCAGGCGATGGCAGTTaGAGCACGCCAGGGAGGAAG +
Preference number: 3 (lower is better)
Translates to: QGCVATKDRLISAEPDLTAGDGS*STPGRK
Trigger: CTTCCTCCCTGGCGTGCTCAAACTGCCATCGCCTGC...GGTCAGATCAGGCTCTGCACTTATCAGCCGGTCCTTTGTGGCAACGCAGCCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
3UTR-3UTR CAA 90 bp GAAGGGGCCTGCGCTGGCAAGTCCAGAGGGGTGCACTTGGGCACGGGAGTGCTGTGTCATGGTGGGTATTaGCTGATGGTCCTGGCAGAA +
Preference number: 3 (lower is better)
Translates to: EGACAGKSRGVHLGTGVLCHGGY*LMVLAE
Trigger: TTCTGCCAGGACCATCAGCAAATACCCACCATGACA...CAGCACTCCCGTGCCCAAGTGCACCCCTCTGGACTTGCCAGCGCAGGCCCCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448469.8
3UTR GCA 72 bp CTGACCTGTGCTGATTCCTGGTTTTGGTCCAAGGCCTaGCCTTGCAGTAGGGCCACCTGTTGGCCCCCACCA +
Preference number: 3 (lower is better)
Translates to: LTCADSWFWSKA*PCSRATCWPPP
Trigger: TGGTGGGGGCCAACAGGTGGCCCTACTGCAAGGGCAGGCCTTGGACCAAAACCAGGAATCAGCACAGGTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337827.8
3UTR GCA 72 bp CAAATGGGAGTCTGGCCCTGGTGCAGAAGTCCCTTCTaGTGCCCTGCCCATAGGCTTTCGGGGGACTCTCCT +
Preference number: 3 (lower is better)
Translates to: QMGVWPWCRSPF*CPAHRLSGDSP
Trigger: AGGAGAGTCCCCCGAAAGCCTATGGGCAGGGCAGCAGAAGGGACTTCTGCACCAGGGCCAGACTCCCATTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337827.8
3UTR CCA 72 bp CCTTCTAGTCCATCCTCTGGGGAGAGGCCTTTGCCCTaGGCCCAGTTCTGTCCTAAGCTGTGGCAGGAGGCT +
Preference number: 3 (lower is better)
Translates to: PSSPSSGERPLP*AQFCPKLWQEA
Trigger: AGCCTCCTGCCACAGCTTAGGACAGAACTGGGCCCAGGGCAAAGGCCTCTCCCCAGAGGATGGACTAGAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
3UTR CCA 72 bp CCTGGGCTCCACCTGACCTGTGCTGATTCCTGGTTTTaGTCCAAGGCCTGCCCTTGCAGTAGGGCCACCTGT +
Preference number: 3 (lower is better)
Translates to: PGLHLTCADSWF*SKACPCSRATC
Trigger: ACAGGTGGCCCTACTGCAAGGGCAGGCCTTGGACCAAAACCAGGAATCAGCACAGGTCAGGTGGAGCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337827.8
3UTR CCA 72 bp GGGACCAAGAAGGACGGCCCGGATTCCAGAAGGCATTaGCAGTGGGATAGCTGGCTCATCCTGTCCTCCTGG +
Preference number: 3 (lower is better)
Translates to: GTKKDGPDSRRH*QWDSWLILSSW
Trigger: CCAGGAGGACAGGATGAGCCAGCTATCCCACTGCCAATGCCTTCTGGAATCCGGGCCGTCCTTCTTGGTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR CCA 72 bp GGCCAAACCTCCAGCAATGCCCAGCTGGAGAGAGTATaGCCATCCTCACCCCAGGGAGTCGTGGTGCTTGGA +
Preference number: 3 (lower is better)
Translates to: GQTSSNAQLERV*PSSPQGVVVLG
Trigger: TCCAAGCACCACGACTCCCTGGGGTGAGGATGGCCATACTCTCTCCAGCTGGGCATTGCTGGAGGTTTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR-3UTR CAA 90 bp GAGAGGACGCTGGTGAGAGTCAGGAGGCGAAACTGCTGGAGAGCCCTCCAGAGCGGTACCAACAGTCATTaGCCCAAGAGCCAGTGGGGT +
Preference number: 3 (lower is better)
Translates to: ERTLVRVRRRNCWRALQSGTNSH*PKSQWG
Trigger: ACCCCACTGGCTCTTGGGCAAATGACTGTTGGTACC...GCTCTGGAGGGCTCTCCAGCAGTTTCGCCTCCTGACTCTCACCAGCGTCCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
3UTR-3UTR CAA 90 bp TCTGGCCCTGGTGCAGAAGTCCCTTCTGCTGCCCTGCCCATAGGCTTTCGGGGGTGGGTATGTGGATCCTaGGCCTATGAAAGACAGGGG +
Preference number: 3 (lower is better)
Translates to: SGPGAEVPSAALPIGFRGWVCGS*AYERQG
Trigger: CCCCTGTCTTTCATAGGCCAAGGATCCACATACCCA...CCCCCGAAAGCCTATGGGCAGGGCAGCAGAAGGGACTTCTGCACCAGGGCCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337827.8
3UTR GCA 72 bp CAGCTCCCTGCTGTACAAATGGGAGTCTGGCCCTGGTaGAGAAGTCCCTTCTGCTGCCCTGCCCATAGGCTT +
Preference number: 3 (lower is better)
Translates to: QLPAVQMGVWPW*RSPFCCPAHRL
Trigger: AAGCCTATGGGCAGGGCAGCAGAAGGGACTTCTGCACCAGGGCCAGACTCCCATTTGTACAGCAGGGAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337827.8
3UTR GCA 72 bp GTCACAGAGGCCCAGGGATCCTCAGGAACAGCTCCCTaGTGTACAAATGGGAGTCTGGCCCTGGTGCAGAAG +
Preference number: 3 (lower is better)
Translates to: VTEAQGSSGTAP*CTNGSLALVQK
Trigger: CTTCTGCACCAGGGCCAGACTCCCATTTGTACAGCAGGGAGCTGTTCCTGAGGATCCCTGGGCCTCTGTGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337827.8
3UTR CCA 72 bp AGTGCTGGGAGACATCCCCCGCAGGCCTTGGGGTGCTaGAACCCTGGGACGACAGTCATATTGTCCAGGTTA +
Preference number: 3 (lower is better)
Translates to: SAGRHPPQALGC*NPGTTVILSRL
Trigger: TAACCTGGACAATATGACTGTCGTCCCAGGGTTCCAGCACCCCAAGGCCTGCGGGGGATGTCTCCCAGCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337827.8
3UTR CCA 72 bp GCACAGCTGGGCCTCATGACCCAAAAGACCCCTGTGTaGGCTTCTGTCCTTGCTTTCTCCGGGCAACAAGGG +
Preference number: 3 (lower is better)
Translates to: AQLGLMTQKTPV*ASVLAFSGQQG
Trigger: CCCTTGTTGCCCGGAGAAAGCAAGGACAGAAGCCCACACAGGGGTCTTTTGGGTCATGAGGCCCAGCTGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448469.8
3UTR CCA 72 bp CATTGGCAGTGGGATAGCTGGCTCATCCTGTCCTCCTaGGAGAAGAGGGGCACAGGCACCCAGAATGCCATC +
Preference number: 3 (lower is better)
Translates to: HWQWDSWLILSS*EKRGTGTQNAI
Trigger: GATGGCATTCTGGGTGCCTGTGCCCCTCTTCTCCCAGGAGGACAGGATGAGCCAGCTATCCCACTGCCAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR-3UTR CAA 90 bp CCTCTTGAAGGCCCTCTGGTCAGCAGTCCTCTTACATTCAACAGGCGCAGCCCCTTAGGGGGTGGCAGCTaGGGCAGACAGTGGCTTCAA +
Preference number: 3 (lower is better)
Translates to: PLEGPLVSSPLTFNRRSPLGGGS*GRQWLQ
Trigger: TTGAAGCCACTGTCTGCCCAAGCTGCCACCCCCTAA...GGGGCTGCGCCTGTTGAATGTAAGAGGACTGCTGACCAGAGGGCCTTCAAGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
3UTR-3UTR CAA 90 bp GCCCTCTGCCTTAGATGGGGCTCTTGTTCTGCAGGTCACCATAGTTCCTGCCTGGGAGCCTGGCAGGACTaGCAGGGGCAGAATGAATGG +
Preference number: 3 (lower is better)
Translates to: ALCLRWGSCSAGHHSSCLGAWQD*QGQNEW
Trigger: CCATTCATTCTGCCCCTGCAAGTCCTGCCAGGCTCC...CAGGCAGGAACTATGGTGACCTGCAGAACAAGAGCCCCATCTAAGGCAGAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR-3UTR CAA 90 bp CAGGGCTGCGTTGCCACAAAGGACCGGCTGATAAGTGCAGAGCCTGATCTGACCGGTACCAACAGTCATTaGCCCAAGAGCCAGTGGGGT +
Preference number: 3 (lower is better)
Translates to: QGCVATKDRLISAEPDLTGTNSH*PKSQWG
Trigger: ACCCCACTGGCTCTTGGGCAAATGACTGTTGGTACC...GGTCAGATCAGGCTCTGCACTTATCAGCCGGTCCTTTGTGGCAACGCAGCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
3UTR-3UTR CAA 90 bp AATTGTCCTCAGATGGCTCTGGAGCCTCAGTCCAGGTCGGCTACTCAGACAGCCTTAGGGGGTGGCAGCTaGGGCAGACAGTGGCTTCAA +
Preference number: 3 (lower is better)
Translates to: NCPQMALEPQSRSATQTALGGGS*GRQWLQ
Trigger: TTGAAGCCACTGTCTGCCCAAGCTGCCACCCCCTAA...GGCTGTCTGAGTAGCCGACCTGGACTGAGGCTCCAGAGCCATCTGAGGACAATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337827.8
3UTR-3UTR CAA 90 bp TCTGGTCAGCAGTCCTCTTACATTCAACAGGCGCAGCCCCGGCTCCCCAGCCCCAGGACAGGGCTAGACTaGAGCATGTTCAGTTTCACT +
Preference number: 3 (lower is better)
Translates to: SGQQSSYIQQAQPRLPSPRTGLD*SMFSFT
Trigger: AGTGAAACTGAACATGCTCAAGTCTAGCCCTGTCCT...GGGGCTGGGGAGCCGGGGCTGCGCCTGTTGAATGTAAGAGGACTGCTGACCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000337827.8
3UTR-3UTR CAA 90 bp CCTGGCTGCGGAAGAAACATCACGACAGAGGACAGGCAAAGCATGGCCCTGGGAAGAGACCACACACTATaGTCCCAGCCCCAAGAAGCG +
Preference number: 3 (lower is better)
Translates to: PGCGRNITTEDRQSMALGRDHTL*SQPQEA
Trigger: CGCTTCTTGGGGCTGGGACAATAGTGTGTGGTCTCT...TCCCAGGGCCATGCTTTGCCTGTCCTCTGTCGTGATGTTTCTTCCGCAGCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448469.8
3UTR GCA 72 bp CCACAGGGCATGGAGGCCGACGAGCAAGCTACCAGGTaGAGGACAGGGCTAGACTTGAGCATGTTCAGTTTC +
Preference number: 3 (lower is better)
Translates to: PQGMEADEQATR*RTGLDLSMFSF
Trigger: GAAACTGAACATGCTCAAGTCTAGCCCTGTCCTGCACCTGGTAGCTTGCTCGTCGGCCTCCATGCCCTGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337827.8
3UTR CCA 72 bp GGAGGAAGATTAGGGGGTGGCAGCTTGGGCAGACAGTaGCTTCAATCCAGAGCAGAGGTTCAGGCCCTTTGG +
Preference number: 3 (lower is better)
Translates to: GGRLGGGSLGRQ*LQSRAEVQALW
Trigger: CCAAAGGGCCTGAACCTCTGCTCTGGATTGAAGCCACTGTCTGCCCAAGCTGCCACCCCCTAATCTTCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
3UTR CCA 72 bp CCAGGGATCCTCAGGAACAGCTCCCTGCTGTACAAATaGGAGTCTGGCCCTGGTGCAGAAGTCCCTTCTGCT +
Preference number: 3 (lower is better)
Translates to: PGILRNSSLLYK*ESGPGAEVPSA
Trigger: AGCAGAAGGGACTTCTGCACCAGGGCCAGACTCCCATTTGTACAGCAGGGAGCTGTTCCTGAGGATCCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337827.8
3UTR CCA 72 bp GAGACATCCCCCGCAGGCCTTGGGGTGCTGGAACCCTaGGACGACAGTCATATTGTCCAGGTTATTTCTCCC +
Preference number: 3 (lower is better)
Translates to: ETSPAGLGVLEP*DDSHIVQVISP
Trigger: GGGAGAAATAACCTGGACAATATGACTGTCGTCCCAGGGTTCCAGCACCCCAAGGCCTGCGGGGGATGTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337827.8
3UTR CCA 72 bp CCCATTAGAGAAGCTGGCTGGGTTGCCCCCTCCTTCTaGAGGAGCACTGACTCAGACCATCACAGGGACACA +
Preference number: 3 (lower is better)
Translates to: PIREAGWVAPSF*RSTDSDHHRDT
Trigger: TGTGTCCCTGTGATGGTCTGAGTCAGTGCTCCTCCAGAAGGAGGGGGCAACCCAGCCAGCTTCTCTAATGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337827.8
3UTR CCA 72 bp ATGACAAATGAGGCTGGGACTACTCAGGGATGTGTGTaGCTACCCGTCCTTTCAGTGGGTCCTGGCGGCAGG +
Preference number: 3 (lower is better)
Translates to: MTNEAGTTQGCV*LPVLSVGPGGR
Trigger: CCTGCCGCCAGGACCCACTGAAAGGACGGGTAGCCACACACATCCCTGAGTAGTCCCAGCCTCATTTGTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448469.8
3UTR CCA 72 bp AAGAAGGACGGCCCGGATTCCAGAAGGCATTGGCAGTaGGATAGCTGGCTCATCCTGTCCTCCTGGGAGAAG +
Preference number: 3 (lower is better)
Translates to: KKDGPDSRRHWQ*DSWLILSSWEK
Trigger: CTTCTCCCAGGAGGACAGGATGAGCCAGCTATCCCACTGCCAATGCCTTCTGGAATCCGGGCCGTCCTTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR-3UTR CAA 90 bp GTTCATCCTTGTGGCCAACATGATCTGTACATTCTCTGGCACAAGGTAGGCACCAGCAGCCTCTGGGCCTaGGGTCCCATTCCCTGGGTG +
Preference number: 3 (lower is better)
Translates to: VHPCGQHDLYILWHKVGTSSLWA*GPIPWV
Trigger: CACCCAGGGAATGGGACCCAAGGCCCAGAGGCTGCT...GGTGCCTACCTTGTGCCAGAGAATGTACAGATCATGTTGGCCACAAGGATGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR-3UTR CAA 90 bp CCTCCAGCAATGCCCAGCTGGAGAGAGTATGGCCATCCTCACCCCAGGGAGTCGTCCACATCTTGGTTCTaGCGGATTCCTTGTGAGGTA +
Preference number: 3 (lower is better)
Translates to: PPAMPSWREYGHPHPRESSTSWF*RIPCEV
Trigger: TACCTCACAAGGAATCCGCAAGAACCAAGATGTGGA...CGACTCCCTGGGGTGAGGATGGCCATACTCTCTCCAGCTGGGCATTGCTGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR TCA 72 bp GGAGCCACAGCCAGCCTCCCAGCACAGTGCAATAGCTaGCCCTTCAAGAAAATCCCTCCTGTAGTAGGGAGG +
Preference number: 3 (lower is better)
Translates to: GATASLPAQCNS*PFKKIPPVVGR
Trigger: CCTCCCTACTACAGGAGGGATTTTCTTGAAGGGTCAGCTATTGCACTGTGCTGGGAGGCTGGCTGTGGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448469.8
3UTR CCA 72 bp TGTGGGGATAGCAGGAGCAGTTCCAAGACAAGGCCGTaGGGTAGATGTGTGGATGTGTTCTCAGCGGCTGTG +
Preference number: 3 (lower is better)
Translates to: CGDSRSSSKTRP*GRCVDVFSAAV
Trigger: CACAGCCGCTGAGAACACATCCACACATCTACCCCACGGCCTTGTCTTGGAACTGCTCCTGCTATCCCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
3UTR CCA 72 bp TGGAGAGAGTATGGCCATCCTCACCCCAGGGAGTCGTaGTGCTTGGAGCTACCTCAGCATCTAGCCTTCTGT +
Preference number: 3 (lower is better)
Translates to: WREYGHPHPRES*CLELPQHLAFC
Trigger: ACAGAAGGCTAGATGCTGAGGTAGCTCCAAGCACCACGACTCCCTGGGGTGAGGATGGCCATACTCTCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR-3UTR CAA 90 bp GAGAAGCTGGCTGGGTTGCCCCCTCCTTCTGGAGGAGCACTGACTCAGACCATCGTCTTTTACAGTGACTaGCTCCTAAGCCCAGACCAA +
Preference number: 3 (lower is better)
Translates to: EKLAGLPPPSGGALTQTIVFYSD*LLSPDQ
Trigger: TTGGTCTGGGCTTAGGAGCAAGTCACTGTAAAAGAC...GATGGTCTGAGTCAGTGCTCCTCCAGAAGGAGGGGGCAACCCAGCCAGCTTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337827.8
3UTR-3UTR CAA 90 bp TCCATCACACCAGGTCTGAGGCACAGGAGCCTCTCGGATACAGGAAACCCAGCTGCATCACTTTCTTCCTaGACCCTGACCTGTCTCCCA +
Preference number: 3 (lower is better)
Translates to: SITPGLRHRSLSDTGNPAASLSS*TLTCLP
Trigger: TGGGAGACAGGTCAGGGTCAAGGAAGAAAGTGATGC...AGCTGGGTTTCCTGTATCCGAGAGGCTCCTGTGCCTCAGACCTGGTGTGATGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR-3UTR CAA 90 bp GGCTCTTGCTTTTCTGTAGTTTGCAGAAGTTCCTGTCCAGATCAGAGGAGGAGGCACCCTCCTCACTGCTaGCACCGACTGAGGCAGGCT +
Preference number: 3 (lower is better)
Translates to: GSCFSVVCRSSCPDQRRRHPPHC*HRLRQA
Trigger: AGCCTGCCTCAGTCGGTGCAAGCAGTGAGGAGGGTG...CCTCCTCCTCTGATCTGGACAGGAACTTCTGCAAACTACAGAAAAGCAAGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR-3UTR CAA 90 bp TACGGAAGTGCCTGGGTGGAGGATGGAGTGTTGCTTGGAACATTTATGAGAAGGGCCCCAGAGGGGCAATaGAGTGGAGGCTTTGCTCGG +
Preference number: 3 (lower is better)
Translates to: YGSAWVEDGVLLGTFMRRAPEGQ*SGGFAR
Trigger: CCGAGCAAAGCCTCCACTCAATTGCCCCTCTGGGGC...CCTTCTCATAAATGTTCCAAGCAACACTCCATCCTCCACCCAGGCACTTCCGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR-3UTR CAA 90 bp GGGAGACTGGAGGTCTCGCATCACAGAGTCATGCAGGGGCTCCTGGTCAGTGCCCCAGTGACATTTTGTTaGTTTGAGACTGAGTCTCGC +
Preference number: 3 (lower is better)
Translates to: GRLEVSHHRVMQGLLVSAPVTFC*FETESR
Trigger: GCGAGACTCAGTCTCAAACAAACAAAATGTCACTGG...GGCACTGACCAGGAGCCCCTGCATGACTCTGTGATGCGAGACCTCCAGTCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR TCA 72 bp GCCCAGGCTGGTCTAGCTAGAACGTCTCACCTCAAGTaGTCCACCTGTCTTGGCCTTCCAAAGCACTGGGAT +
Preference number: 3 (lower is better)
Translates to: AQAGLARTSHLK*STCLGLPKHWD
Trigger: ATCCCAGTGCTTTGGAAGGCCAAGACAGGTGGATCACTTGAGGTGAGACGTTCTAGCTAGACCAGCCTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR GCA 72 bp TGGTTGCGTCCAGGAGAGGCTAGTGGTGTGCTGGCCTaGCAGCTGCAGTTCATATGTATGTTGAAGCAGCGT +
Preference number: 3 (lower is better)
Translates to: WLRPGEASGVLA*QLQFICMLKQR
Trigger: ACGCTGCTTCAACATACATATGAACTGCAGCTGGCAGGCCAGCACACCACTAGCCTCTCCTGGACGCAACCA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337827.8
3UTR GCA 72 bp TGTGAGGCCAGTAATCTACACCCCCTAGTGGGAAGCTaGCTTCTTTGTAGGGATGAAGTGTGGGGCCAGCAG +
Preference number: 3 (lower is better)
Translates to: CEASNLHPLVGS*LLCRDEVWGQQ
Trigger: CTGCTGGCCCCACACTTCATCCCTACAAAGAAGGCAGCTTCCCACTAGGGGGTGTAGATTACTGGCCTCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR-3UTR CAA 90 bp GAGAGGTCTCAGCCTGACACATGGCCAAATAGAAGTGGAGTCTGTTTAATAAACTCCAGAGGGGTGCACTaGGGCACGGGAGTGCTGCCG +
Preference number: 3 (lower is better)
Translates to: ERSQPDTWPNRSGVCLINSRGVH*GTGVLP
Trigger: CGGCAGCACTCCCGTGCCCAAGTGCACCCCTCTGGA...GTTTATTAAACAGACTCCACTTCTATTTGGCCATGTGTCAGGCTGAGACCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448469.8
3UTR-3UTR CAA 90 bp CAGTCATGCCCCTCATTTAAATCAGGCTGTGTGTTCCTATGTAAGAGGCTGCCCCGTGGGCTCAAGGATTaGCCCTCAGAGAGGTGGGTG +
Preference number: 3 (lower is better)
Translates to: QSCPSFKSGCVFLCKRLPRGLKD*PSERWV
Trigger: CACCCACCTCTCTGAGGGCAAATCCTTGAGCCCACG...GGGCAGCCTCTTACATAGGAACACACAGCCTGATTTAAATGAGGGGCATGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR TCA 72 bp TGGGGGAATGGAGGCTGCAGCCAAGGTCTTTTACAGTaGCTTGCTCCTAAGCCCAGACCAAGCTGGACATTG +
Preference number: 3 (lower is better)
Translates to: WGNGGCSQGLLQ*LAPKPRPSWTL
Trigger: CAATGTCCAGCTTGGTCTGGGCTTAGGAGCAAGTCACTGTAAAAGACCTTGGCTGCAGCCTCCATTCCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337827.8
3UTR GCA 72 bp GTGTGGGTGAGAGTGTCGGATCAATGGAAAAAGCAGTaGTCACGTGAGGCTGGTCATGCCAGCTTGGACATC +
Preference number: 3 (lower is better)
Translates to: VWVRVSDQWKKQ*SREAGHASLDI
Trigger: GATGTCCAAGCTGGCATGACCAGCCTCACGTGAGCACTGCTTTTTCCATTGATCCGACACTCTCACCCACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR GCA 72 bp AGAGAGTATGGCCATCCTCACCCCAGGGAGTCGTGGTaGTTGGAGCTACCTCAGCATCTAGCCTTCTGTAAT +
Preference number: 3 (lower is better)
Translates to: REYGHPHPRESW*LELPQHLAFCN
Trigger: ATTACAGAAGGCTAGATGCTGAGGTAGCTCCAAGCACCACGACTCCCTGGGGTGAGGATGGCCATACTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR-3UTR CAA 90 bp GAACAGCTCCCTGCTGTACAAATGGGAGTCTGGCCCTGGTGCAGAAGTCCCTTCATGTCCTGCCTGAATTaGTACCACTGCCTTCTTGTG +
Preference number: 3 (lower is better)
Translates to: EQLPAVQMGVWPWCRSPFMSCLN*YHCLLV
Trigger: CACAAGAAGGCAGTGGTACAAATTCAGGCAGGACAT...GAAGGGACTTCTGCACCAGGGCCAGACTCCCATTTGTACAGCAGGGAGCTGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337827.8
3UTR-3UTR CAA 90 bp GGGAGACTGGAGGTCTCGCATCACAGAGTCATGCAGGGGCTCCTGGTCAGTGCCAAAGCTAACACTTATTaGAACTGTGGTGGTTGTCAG +
Preference number: 3 (lower is better)
Translates to: GRLEVSHHRVMQGLLVSAKANTY*NCGGCQ
Trigger: CTGACAACCACCACAGTTCAAATAAGTGTTAGCTTT...GGCACTGACCAGGAGCCCCTGCATGACTCTGTGATGCGAGACCTCCAGTCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR GCA 72 bp TTGACATTTACCTCATGTAGGCCAAACCTCCAGCAATaGCCAGCTGGAGAGAGTATGGCCATCCTCACCCCA +
Preference number: 3 (lower is better)
Translates to: LTFTSCRPNLQQ*PAGESMAILTP
Trigger: TGGGGTGAGGATGGCCATACTCTCTCCAGCTGGGCATTGCTGGAGGTTTGGCCTACATGAGGTAAATGTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR CCA 72 bp TGTGTGGATGTGTTCTCAGCGGCTGTGAAAAGGAACTaGGAGTTCTCTTCACAAACAGGAGCCACAGCCAGC +
Preference number: 3 (lower is better)
Translates to: CVDVFSAAVKRN*EFSSQTGATAS
Trigger: GCTGGCTGTGGCTCCTGTTTGTGAAGAGAACTCCCAGTTCCTTTTCACAGCCGCTGAGAACACATCCACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
3UTR CCA 72 bp CAGTGGCTTCAATCCAGAGCAGAGGTTCAGGCCCTTTaGGGATCAGGGACCTCTTTTAGAAGCCATGGACTT +
Preference number: 3 (lower is better)
Translates to: QWLQSRAEVQAL*GSGTSFRSHGL
Trigger: AAGTCCATGGCTTCTAAAAGAGGTCCCTGATCCCCAAAGGGCCTGAACCTCTGCTCTGGATTGAAGCCACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
3UTR CCA 72 bp AAAAGCAGTGCTCACGTGAGGCTGGTCATGCCAGCTTaGACATCACTGTGTCTGGAGCTCAGTTTCCCTAGT +
Preference number: 3 (lower is better)
Translates to: KSSAHVRLVMPA*TSLCLELSFPS
Trigger: ACTAGGGAAACTGAGCTCCAGACACAGTGATGTCCAAGCTGGCATGACCAGCCTCACGTGAGCACTGCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR CCA 72 bp ACCCTGACCTGTCTCCCAGGATTAGTGGTGACAGTGTaGGTGAGAGTGTCGGATCAATGGAAAAAGCAGTGC +
Preference number: 3 (lower is better)
Translates to: TLTCLPGLVVTV*VRVSDQWKKQC
Trigger: GCACTGCTTTTTCCATTGATCCGACACTCTCACCCACACTGTCACCACTAATCCTGGGAGACAGGTCAGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR-3UTR CAA 90 bp GGCTCTTGCTTTTCTGTAGTTTGCAGAAGTTCCTGTCCAGATCAGAGGAGGAGGGCTGGTCATGCCAGCTaGGACATCACTGTGTCTGGA +
Preference number: 3 (lower is better)
Translates to: GSCFSVVCRSSCPDQRRRAGHAS*DITVSG
Trigger: TCCAGACACAGTGATGTCCAAGCTGGCATGACCAGC...CCTCCTCCTCTGATCTGGACAGGAACTTCTGCAAACTACAGAAAAGCAAGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR-3UTR CAA 90 bp CAGTCATGCCCCTCATTTAAATCAGGCTGTGTGTTCCTATGTAAGAGGCTGCCCGAAACCCAGCTAGCCTaGGAAATAGGACCAGCAGGG +
Preference number: 3 (lower is better)
Translates to: QSCPSFKSGCVFLCKRLPETQLA*EIGPAG
Trigger: CCCTGCTGGTCCTATTTCCAAGGCTAGCTGGGTTTC...GGGCAGCCTCTTACATAGGAACACACAGCCTGATTTAAATGAGGGGCATGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR-3UTR CAA 90 bp TACGGAAGTGCCTGGGTGGAGGATGGAGTGTTGCTTGGAACATTTATGAGAAGGCAATCTCAGGGCTTCTaGACTCTCCAGGCCACTCAA +
Preference number: 3 (lower is better)
Translates to: YGSAWVEDGVLLGTFMRRQSQGF*TLQATQ
Trigger: TTGAGTGGCCTGGAGAGTCAAGAAGCCCTGAGATTG...CCTTCTCATAAATGTTCCAAGCAACACTCCATCCTCCACCCAGGCACTTCCGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR TCA 72 bp GTCAAGGACCATGTCCGTTCATCCTTGTGGCCAACATaGTCTGTACATTCTCTGGCACAAGGTAGGCACCCA +
Preference number: 3 (lower is better)
Translates to: VKDHVRSSLWPT*SVHSLAQGRHP
Trigger: TGGGTGCCTACCTTGTGCCAGAGAATGTACAGATCATGTTGGCCACAAGGATGAACGGACATGGTCCTTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR CCA 72 bp CTCCCTTCTTTCTCTTCCACTAAAGTGCAAATTCCCTaGGGGTCAAGGACCATGTCCGTTCATCCTTGTGGC +
Preference number: 3 (lower is better)
Translates to: LPSFSSTKVQIP*GSRTMSVHPCG
Trigger: GCCACAAGGATGAACGGACATGGTCCTTGACCCCCAGGGAATTTGCACTTTAGTGGAAGAGAAAGAAGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR-3UTR CAA 90 bp CTGCAGGTCACCATAGTTCCTGCCTGGTCCCGACTTTTCTCCTATTGGGGTTTTTTTGAACTGTGGTGGTaGTCAGGAGCTAGGGATACA +
Preference number: 3 (lower is better)
Translates to: LQVTIVPAWSRLFSYWGFFELWW*SGARDT
Trigger: TGTATCCCTAGCTCCTGACAACCACCACAGTTCAAA...AAAACCCCAATAGGAGAAAAGTCGGGACCAGGCAGGAACTATGGTGACCTGCAG
50% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR TCA 72 bp TCCATGAACTCTATGGGTATGTGGATCCTTGGCCTATaGAAGACAGGGGGCTCCTGTGGTAGGTATATCTGC +
Preference number: 3 (lower is better)
Translates to: SMNSMGMWILGL*KTGGSCGRYIC
Trigger: GCAGATATACCTACCACAGGAGCCCCCTGTCTTTCATAGGCCAAGGATCCACATACCCATAGAGTTCATGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
3UTR TCA 72 bp TTCTGGAAATCCACTGTCACTGGTTGCTGTGTACCCTaGGCAAGTGACTCCACCTCTCTGTGCATCACTTTC +
Preference number: 3 (lower is better)
Translates to: FWKSTVTGCCVP*ASDSTSLCITF
Trigger: GAAAGTGATGCACAGAGAGGTGGAGTCACTTGCTCAGGGTACACAGCAACCAGTGACAGTGGATTTCCAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR GCA 72 bp CATTTAAATCAGGCTGTGTGTTCCTATGTAAGAGGCTaGCCCCATCCTGCCTCTAACACCAGCTTTAAGCCC +
Preference number: 3 (lower is better)
Translates to: HLNQAVCSYVRG*PHPASNTSFKP
Trigger: GGGCTTAAAGCTGGTGTTAGAGGCAGGATGGGGGCAGCCTCTTACATAGGAACACACAGCCTGATTTAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR CCA 72 bp CCTCCTAGAACAAGCTTTGGAGAACGTGTGTCATGGTaGGTATTTGCTGATGGTCCTGGCAGAAATGTGAGG +
Preference number: 3 (lower is better)
Translates to: PPRTSFGERVSW*VFADGPGRNVR
Trigger: CCTCACATTTCTGCCAGGACCATCAGCAAATACCCACCATGACACACGTTCTCCAAAGCTTGTTCTAGGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448469.8
3UTR CCA 72 bp TCTCAGGGCTTCTTGACTCTCCAGGCCACTCAATTCTaGGCTTGTCTGAGAAACAATGTCACATCACCCACT +
Preference number: 3 (lower is better)
Translates to: SQGFLTLQATQF*ACLRNNVTSPT
Trigger: AGTGGGTGATGTGACATTGTTTCTCAGACAAGCCCAGAATTGAGTGGCCTGGAGAGTCAAGAAGCCCTGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR TCA 72 bp GTGTGCTGGCCTGCCAGCTGCAGTTCATATGTATGTTaGAGCAGCGTTTATTTTTACCTGGGTAGGTTCAGC +
Preference number: 3 (lower is better)
Translates to: VCWPASCSSYVC*SSVYFYLGRFS
Trigger: GCTGAACCTACCCAGGTAAAAATAAACGCTGCTTCAACATACATATGAACTGCAGCTGGCAGGCCAGCACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337827.8
3UTR TCA 72 bp AAGCTTTGGAGAACGTGTGTCATGGTGGGTATTTGCTaGTGGTCCTGGCAGAAATGTGAGGAGATGGGAACA +
Preference number: 3 (lower is better)
Translates to: KLWRTCVMVGIC*WSWQKCEEMGT
Trigger: TGTTCCCATCTCCTCACATTTCTGCCAGGACCATCAGCAAATACCCACCATGACACACGTTCTCCAAAGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448469.8
3UTR CCA 72 bp CAGCTTCTATGTAGTTATTGGACCCAGTTTCTTACATaGCATCAGTTGCTGGGGCTGAGGATTTGCCCTCTG +
Preference number: 3 (lower is better)
Translates to: QLLCSYWTQFLT*HQLLGLRICPL
Trigger: CAGAGGGCAAATCCTCAGCCCCAGCAACTGATGCCATGTAAGAAACTGGGTCCAATAACTACATAGAAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR-3UTR CAA 90 bp GTTCATCCTTGTGGCCAACATGATCTGTACATTCTCTGGCACAAGGTAGGCACCCACTCAATTCTGGGCTaGTCTGAGAAACAATGTCAC +
Preference number: 3 (lower is better)
Translates to: VHPCGQHDLYILWHKVGTHSILG*SEKQCH
Trigger: GTGACATTGTTTCTCAGACAAGCCCAGAATTGAGTG...GGTGCCTACCTTGTGCCAGAGAATGTACAGATCATGTTGGCCACAAGGATGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR CCA 72 bp AGAAGAGTTGCTCCTGTAGAACATTACGGAAGTGCCTaGGTGGAGGATGGAGTGTTGCTTGGAACATTTATG +
Preference number: 3 (lower is better)
Translates to: RRVAPVEHYGSA*VEDGVLLGTFM
Trigger: CATAAATGTTCCAAGCAACACTCCATCCTCCACCCAGGCACTTCCGTAATGTTCTACAGGAGCAACTCTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR-3UTR CAA 90 bp TGGAGTCTGTTTAATAAACTACGCCCGAATCTTCCCCTAAAGATCCCTCTGCAGAGAGACCTTGTTCTTTaGGTGCTTTGCTGCTCTTCT +
Preference number: 3 (lower is better)
Translates to: WSLFNKLRPNLPLKIPLQRDLVL*VLCCSS
Trigger: AGAAGAGCAGCAAAGCACCAAAAGAACAAGGTCTCT...CTGCAGAGGGATCTTTAGGGGAAGATTCGGGCGTAGTTTATTAAACAGACTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448469.8
3UTR CCA 72 bp TTACCCAAAGAAGTATTTCCTCATGGGCAGAATAATTaGCTTGACCTAGATGTAGACTTTGCTCCCCCTCCC +
Preference number: 3 (lower is better)
Translates to: LPKEVFPHGQNN*LDLDVDFAPPP
Trigger: GGGAGGGGGAGCAAAGTCTACATCTAGGTCAAGCCAATTATTCTGCCCATGAGGAAATACTTCTTTGGGTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR CCA 72 bp CGTGCAAATCTGCATTTCCAGCTTCTATGTAGTTATTaGACCCAGTTTCTTACATGGCATCAGTTGCTGGGG +
Preference number: 3 (lower is better)
Translates to: RANLHFQLLCSY*TQFLTWHQLLG
Trigger: CCCCAGCAACTGATGCCATGTAAGAAACTGGGTCCAATAACTACATAGAAGCTGGAAATGCAGATTTGCACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR-3UTR CAA 90 bp ACATGTAAGAAGTGGTTTTATTCCAGGTGTGTGTTTCATAAAGACGAGGTCCTCCAAATTACCCATCCTTaGCTGCCAAGACACCATCCG +
Preference number: 3 (lower is better)
Translates to: TCKKWFYSRCVFHKDEVLQITHP*LPRHHP
Trigger: CGGATGGTGTCTTGGCAGCAAAGGATGGGTAATTTG...GAGGACCTCGTCTTTATGAAACACACACCTGGAATAAAACCACTTCTTACATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448469.8
3UTR TCA 72 bp TATTTTGCTGTTTTTACCCAGGAAGTATGTCCTGCCTaGATTTGTACCACTGCCTTCTTGTGTGGTAGAGCA +
Preference number: 3 (lower is better)
Translates to: YFAVFTQEVCPA*ICTTAFLCGRA
Trigger: TGCTCTACCACACAAGAAGGCAGTGGTACAAATTCAGGCAGGACATACTTCCTGGGTAAAAACAGCAAAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337827.8
3UTR GCA 72 bp TTTTGGTGCTTTGCTGCTCTTCTATCCATGTTCATTTaGAAATTACCCATCCTTTGCTGCCAAGACACCATC +
Preference number: 3 (lower is better)
Translates to: FWCFAALLSMFI*KLPILCCQDTI
Trigger: GATGGTGTCTTGGCAGCAAAGGATGGGTAATTTGCAAATGAACATGGATAGAAGAGCAGCAAAGCACCAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448469.8
3UTR-3UTR CAA 90 bp TCTGCTACCCAATCAAGCAAAGCTGGTCTGGTAAGACTCTTTTCAGAATTATTTCAGGGCAATACCTATTaGGAGAAGCAATTTGCTTTC +
Preference number: 3 (lower is better)
Translates to: SATQSSKAGLVRLFSELFQGNTY*EKQFAF
Trigger: GAAAGCAAATTGCTTCTCCAAATAGGTATTGCCCTG...AAATAATTCTGAAAAGAGTCTTACCAGACCAGCTTTGCTTGATTGGGTAGCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR GCA 90 bp CGCTGGCAAGTCCAGAGGGGTGCACTTGGGCACGGGAGTGCTGCCGAGAGGACGCCGGCCGCCGGAGGATaGTGCGTGGGCTCGGTTGTC +
Preference number: 4 (lower is better)
Translates to: RWQVQRGALGHGSAAERTPAAGG*CVGSVV
Trigger: GACAACCGAGCCCACGCAGCATCCTCCGGCGGCCGG...CGTCCTCTCGGCAGCACTCCCGTGCCCAAGTGCACCCCTCTGGACTTGCCAGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR GCA 90 bp AAGGGGCCTGCGCTGGCAAGTCCAGAGGGGTGCACTTGGGCACGGGAGTGCTGCCGGGGCGTGCCCGCCTaGGCCCTCCTAGAACAAGCT +
Preference number: 4 (lower is better)
Translates to: KGPALASPEGCTWARECCRGVPA*ALLEQA
Trigger: AGCTTGTTCTAGGAGGGCGCAGGCGGGCACGCCCCG...GCAGCACTCCCGTGCCCAAGTGCACCCCTCTGGACTTGCCAGCGCAGGCCCCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000448469.8
CDS-3UTR CCA 90 bp AAGGGGCCTGCGCTGGCAAGTCCAGAGGGGTGCACTTGGGCACGGGAGTGCTGCCGAAGGCCTTCCCGATaGCCGAGGGCCGGGCCTCAT +
Preference number: 4 (lower is better)
Translates to: KGPALASPEGCTWARECCRRPSR*PRAGPH
Trigger: ATGAGGCCCGGCCCTCGGCCATCGGGAAGGCCTTCG...GCAGCACTCCCGTGCCCAAGTGCACCCCTCTGGACTTGCCAGCGCAGGCCCCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR CCA 90 bp AAGGGGCCTGCGCTGGCAAGTCCAGAGGGGTGCACTTGGGCACGGGAGTGCTGCGCCCTGAGTAGGCGGTaGGTGGTGGGCTGTGCTCCC +
Preference number: 4 (lower is better)
Translates to: KGPALASPEGCTWARECCALSRR*VVGCAP
Trigger: GGGAGCACAGCCCACCACCCACCGCCTACTCAGGGC...GCAGCACTCCCGTGCCCAAGTGCACCCCTCTGGACTTGCCAGCGCAGGCCCCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR TCA 90 bp CACCTGTTGGCCCCCACCAGAGCAGTCAGGAGTTCCTGGGGCACCACAGGGCATCGGGGGAGGGTGTGCTaGAGGGCTAGGCCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: HLLAPTRAVRSSWGTTGHRGRVC*RARPGG
Trigger: GCCTCCAGGCCTAGCCCTTCAGCACACCCTCCCCCG...ATGCCCTGTGGTGCCCCAGGAACTCCTGACTGCTCTGGTGGGGGCCAACAGGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR GCA 90 bp TCTGGTCAGCAGTCCTCTTACATTCAACAGGCGCAGCCCCGGCTCCCCAGCCCCCGGTCCTCGCGGAGCTaGTCCGACCTCCTGCCTGCC +
Preference number: 4 (lower is better)
Translates to: SGQQSSYIQQAQPRLPSPRSSRS*SDLLPA
Trigger: GGCAGGCAGGAGGTCGGAGCAGCTCCGCGAGGACCG...GGGGCTGGGGAGCCGGGGCTGCGCCTGTTGAATGTAAGAGGACTGCTGACCAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR GCA 90 bp GAAGGGGCCTGCGCTGGCAAGTCCAGAGGGGTGCACTTGGGCACGGGAGTGCTGGTGTGTGGCAACAGCTaGCACTGCTGGGCCTGGGCG +
Preference number: 4 (lower is better)
Translates to: EGACAGKSRGVHLGTGVLVCGNS*HCWAWA
Trigger: CGCCCAGGCCCAGCAGTGGCAGCTGTTGCCACACAC...CAGCACTCCCGTGCCCAAGTGCACCCCTCTGGACTTGCCAGCGCAGGCCCCTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR GCA 90 bp GTAGGCGGTGGGTGGTGGGCTGTGCTCCCTGAGAGGACGGAGGGGTGGATGGGGCCACACCCCATGCAGTaGTGGGAGACATCCCCCGCA +
Preference number: 4 (lower is better)
Translates to: VGGGWWAVLPERTEGWMGPHPMQ*WETSPA
Trigger: TGCGGGGGATGTCTCCCAGCACTGCATGGGGTGTGG...CCCCATCCACCCCTCCGTCCTCTCAGGGAGCACAGCCCACCACCCACCGCCTAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR CCA 90 bp CAGGTGCTGCGGACCACAGACACTTGGCTGCTGACCCCAAGGGCCGTGTGGAGGCGCGGATCTTCCTCATaGTGGGCAGACGGGCGCCCC +
Preference number: 4 (lower is better)
Translates to: QVLRTTDTWLLTPRAVWRRGSSS*WADGRP
Trigger: GGGGCGCCCGTCTGCCCACCATGAGGAAGATCCGCG...CCTCCACACGGCCCTTGGGGTCAGCAGCCAAGTGTCTGTGGTCCGCAGCACCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR CCA 90 bp GAAGGGGCCTGCGCTGGCAAGTCCAGAGGGGTGCACTTGGGCACGGGAGTGCTGGTAGGCGGTGGGTGGTaGGCTGTGCTCCCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: EGACAGKSRGVHLGTGVLVGGGW*AVLPER
Trigger: CCTCTCAGGGAGCACAGCCCACCACCCACCGCCTAC...CAGCACTCCCGTGCCCAAGTGCACCCCTCTGGACTTGCCAGCGCAGGCCCCTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR TCA 90 bp GTCCAGCACCCTGACCATCTCCTCTCCCGGGGCAAGGCCAGGACAGCACTGAGGGCCTGGGCGTCAGCCTaGCACTTGCTGGTCACCAGC +
Preference number: 4 (lower is better)
Translates to: VQHPDHLLSRGKARTALRAWASA*HLLVTS
Trigger: GCTGGTGACCAGCAAGTGTCAGGCTGACGCCCAGGC...CCTCAGTGCTGTCCTGGCCTTGCCCCGGGAGAGGAGATGGTCAGGGTGCTGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448469.8
CDS-3UTR TCA 90 bp CGCTGGCAAGTCCAGAGGGGTGCACTTGGGCACGGGAGTGCTGCCGAGAGGACGAACAGTCCAGCACCCTaGCCATCTCCTCTCCCGGGG +
Preference number: 4 (lower is better)
Translates to: RWQVQRGALGHGSAAERTNSPAP*PSPLPG
Trigger: CCCCGGGAGAGGAGATGGTCAGGGTGCTGGACTGTT...CGTCCTCTCGGCAGCACTCCCGTGCCCAAGTGCACCCCTCTGGACTTGCCAGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448469.8
CDS-3UTR GCA 90 bp GAGTGCTGCCGAGAGGACGCTGGTGAGAGTCAGGAGGCGAAACTGCTGGAGAGCCGGTCCTCGCGGAGCTaGTCCGACCTCCTGCCTGCC +
Preference number: 4 (lower is better)
Translates to: ECCREDAGESQEAKLLESRSSRS*SDLLPA
Trigger: GGCAGGCAGGAGGTCGGAGCAGCTCCGCGAGGACCG...GCTCTCCAGCAGTTTCGCCTCCTGACTCTCACCAGCGTCCTCTCGGCAGCACTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR GCA 90 bp CAGGTGCTGCGGACCACAGACACTTGGCTGCTGACCCCAAGGGCCGTGTGGAGGGTGTGTGGCAACAGCTaGCACTGCTGGGCCTGGGCG +
Preference number: 4 (lower is better)
Translates to: QVLRTTDTWLLTPRAVWRVCGNS*HCWAWA
Trigger: CGCCCAGGCCCAGCAGTGGCAGCTGTTGCCACACAC...CCTCCACACGGCCCTTGGGGTCAGCAGCCAAGTGTCTGTGGTCCGCAGCACCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR GCA 90 bp GGAGGGCAGCTCCGAGGGGACAGGCCTGGCTCACAGGGAAGGAGAGAGGGCTGGGGAGTCTGGCCCTGGTaGAGAAGTCCCTTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: GGQLRGDRPGSQGRREGWGVWPW*RSPFCC
Trigger: GCAGCAGAAGGGACTTCTGCACCAGGGCCAGACTCC...CCAGCCCTCTCTCCTTCCCTGTGAGCCAGGCCTGTCCCCTCGGAGCTGCCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR CCA 90 bp CCTCCAGCAATGCCCAGCTGGAGAGAGTATGGCCATCCTCACCCCAGGGAGTCGGGCGGGTGTCCCGGATaGGCCGGTCTGGGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: PPAMPSWREYGHPHPRESGGCPG*AGLGSA
Trigger: AGCTGAGCCCAGACCGGCCCATCCGGGACACCCGCC...CGACTCCCTGGGGTGAGGATGGCCATACTCTCTCCAGCTGGGCATTGCTGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR CCA 90 bp CACCTGTTGGCCCCCACCAGAGCAGTCAGGAGTTCCTGGGGCACCACAGGGCATCGAAGGCCTTCCCGATaGCCGAGGGCCGGGCCTCAT +
Preference number: 4 (lower is better)
Translates to: HLLAPTRAVRSSWGTTGHRRPSR*PRAGPH
Trigger: ATGAGGCCCGGCCCTCGGCCATCGGGAAGGCCTTCG...ATGCCCTGTGGTGCCCCAGGAACTCCTGACTGCTCTGGTGGGGGCCAACAGGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR CCA 90 bp GAAGGGGCCTGCGCTGGCAAGTCCAGAGGGGTGCACTTGGGCACGGGAGTGCTGCTGAACAGCCATGCCTaGGCGGGCTGCGGGTTCTTG +
Preference number: 4 (lower is better)
Translates to: EGACAGKSRGVHLGTGVLLNSHA*AGCGFL
Trigger: CAAGAACCCGCAGCCCGCCCAGGCATGGCTGTTCAG...CAGCACTCCCGTGCCCAAGTGCACCCCTCTGGACTTGCCAGCGCAGGCCCCTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR CCA 90 bp GTCCAGCACCCTGACCATCTCCTCTCCCGGGGCAAGGCCAGGACAGCACTGAGGCGAAGGGGCCTGCGCTaGCAAGTCCAGAGGGGTGCA +
Preference number: 4 (lower is better)
Translates to: VQHPDHLLSRGKARTALRRRGLR*QVQRGA
Trigger: TGCACCCCTCTGGACTTGCCAGCGCAGGCCCCTTCG...CCTCAGTGCTGTCCTGGCCTTGCCCCGGGAGAGGAGATGGTCAGGGTGCTGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000448469.8
CDS-3UTR CCA 90 bp CTGGGAGACATCCCCCGCAGGCCTTGGGGTGCTGGAACCCTGGGACGACAGTCAGAGGCCACAGGAGCCTaGGCTCCACCTGACCTGTGC +
Preference number: 4 (lower is better)
Translates to: LGDIPRRPWGAGTLGRQSEATGA*APPDLC
Trigger: GCACAGGTCAGGTGGAGCCCAGGCTCCTGTGGCCTC...TGACTGTCGTCCCAGGGTTCCAGCACCCCAAGGCCTGCGGGGGATGTCTCCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR CCA 90 bp GTAGGCGGTGGGTGGTGGGCTGTGCTCCCTGAGAGGACGGAGGGGTGGATGGGGGGAAGGAGAGAGGGCTaGCTAAAGGCAAGCACGGCG +
Preference number: 4 (lower is better)
Translates to: VGGGWWAVLPERTEGWMGGRREG*LKASTA
Trigger: CGCCGTGCTTGCCTTTAGCCAGCCCTCTCTCCTTCC...CCCCATCCACCCCTCCGTCCTCTCAGGGAGCACAGCCCACCACCCACCGCCTAC
67% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR CCA 90 bp GAAGGGGCCTGCGCTGGCAAGTCCAGAGGGGTGCACTTGGGCACGGGAGTGCTGCCTTTCAGTGGGTCCTaGCGGCAGGGACAGGGCACT +
Preference number: 4 (lower is better)
Translates to: EGACAGKSRGVHLGTGVLPFSGS*RQGQGT
Trigger: AGTGCCCTGTCCCTGCCGCCAGGACCCACTGAAAGG...CAGCACTCCCGTGCCCAAGTGCACCCCTCTGGACTTGCCAGCGCAGGCCCCTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448469.8
3UTR CAA 72 bp GAGCCCTCCAGAGCAGGTGCTGCGGACCACAGACACTaGGCTGCTGACCCCAAGGGCCGTGTGGAGGGAGCA +
Preference number: 4 (lower is better)
Translates to: EPSRAGAADHRH*AADPKGRVEGA
Trigger: TGCTCCCTCCACACGGCCCTTGGGGTCAGCAGCCAAGTGTCTGTGGTCCGCAGCACCTGCTCTGGAGGGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR TCA 90 bp AAGGGGCCTGCGCTGGCAAGTCCAGAGGGGTGCACTTGGGCACGGGAGTGCTGCAGCCTGGGCTCCACCTaGCCTGTGCTGATTCCTGGT +
Preference number: 4 (lower is better)
Translates to: KGPALASPEGCTWARECCSLGST*PVLIPG
Trigger: ACCAGGAATCAGCACAGGTCAGGTGGAGCCCAGGCT...GCAGCACTCCCGTGCCCAAGTGCACCCCTCTGGACTTGCCAGCGCAGGCCCCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR GCA 90 bp GCAGGGTGTGGGGATAGCAGGAGCAGTTCCAAGACAAGGCCGTGGGGTAGATGTGCGCCCATTCATTCGTaGGCAGGGCCGGCCCCGCGC +
Preference number: 4 (lower is better)
Translates to: AGCGDSRSSSKTRPWGRCAPIHS*AGPAPR
Trigger: GCGCGGGGCCGGCCCTGCGCACGAATGAATGGGCGC...ACATCTACCCCACGGCCTTGTCTTGGAACTGCTCCTGCTATCCCCACACCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR GCA 90 bp GAGAGGACGCTGGTGAGAGTCAGGAGGCGAAACTGCTGGAGAGCCCTCCAGAGCGCCGCCGGAGGATGCTaGGTGGGCTCGGTTGTCCTG +
Preference number: 4 (lower is better)
Translates to: ERTLVRVRRRNCWRALQSAAGGC*VGSVVL
Trigger: CAGGACAACCGAGCCCACGCAGCATCCTCCGGCGGC...GCTCTGGAGGGCTCTCCAGCAGTTTCGCCTCCTGACTCTCACCAGCGTCCTCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR GCA 90 bp GAGTGCTGCCGAGAGGACGCTGGTGAGAGTCAGGAGGCGAAACTGCTGGAGAGCGCCGCCGGAGGATGCTaGGTGGGCTCGGTTGTCCTG +
Preference number: 4 (lower is better)
Translates to: ECCREDAGESQEAKLLESAAGGC*VGSVVL
Trigger: CAGGACAACCGAGCCCACGCAGCATCCTCCGGCGGC...GCTCTCCAGCAGTTTCGCCTCCTGACTCTCACCAGCGTCCTCTCGGCAGCACTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR GCA 90 bp CTGGGAGACATCCCCCGCAGGCCTTGGGGTGCTGGAACCCTGGGACGACAGTCAGCAAGTCCAGAGGGGTaGACTTGGGCACGGGAGTGC +
Preference number: 4 (lower is better)
Translates to: LGDIPRRPWGAGTLGRQSASPEG*TWAREC
Trigger: GCACTCCCGTGCCCAAGTGCACCCCTCTGGACTTGC...TGACTGTCGTCCCAGGGTTCCAGCACCCCAAGGCCTGCGGGGGATGTCTCCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR GCA 90 bp GTCCAGCACCCTGACCATCTCCTCTCCCGGGGCAAGGCCAGGACAGCACTGAGGCTGGGGAGAGGCCTTTaGCCTGGGCCCAGTTCTGTC +
Preference number: 4 (lower is better)
Translates to: VQHPDHLLSRGKARTALRLGRGL*PGPSSV
Trigger: GACAGAACTGGGCCCAGGGCAAAGGCCTCTCCCCAG...CCTCAGTGCTGTCCTGGCCTTGCCCCGGGAGAGGAGATGGTCAGGGTGCTGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448469.8
CDS-3UTR CCA 90 bp AAGGGGCCTGCGCTGGCAAGTCCAGAGGGGTGCACTTGGGCACGGGAGTGCTGCGATGACGCTGGTGGCTaGCAGGTCCGAGGAGTAGGA +
Preference number: 4 (lower is better)
Translates to: KGPALASPEGCTWARECCDDAGG*QVRGVG
Trigger: TCCTACTCCTCGGACCTGCCAGCCACCAGCGTCATC...GCAGCACTCCCGTGCCCAAGTGCACCCCTCTGGACTTGCCAGCGCAGGCCCCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
3UTR CAA 72 bp CCCAAGGGCCGTGTGGAGGGAGCAGGCGATGGCAGTTaGAGCACGCCAGGGAGGAAGATTAGGGGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: PKGRVEGAGDGS*STPGRKIRGWQ
Trigger: CTGCCACCCCCTAATCTTCCTCCCTGGCGTGCTCAAACTGCCATCGCCTGCTCCCTCCACACGGCCCTTGGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR TCA 90 bp GAGAGGACGCTGGTGAGAGTCAGGAGGCGAAACTGCTGGAGAGCCCTCCAGAGCAGGGGTGCCGTTTCCTaGAGACATGGCCCACCCGGC +
Preference number: 4 (lower is better)
Translates to: ERTLVRVRRRNCWRALQSRGAVS*RHGPPG
Trigger: GCCGGGTGGGCCATGTCTTCAGGAAACGGCACCCCT...GCTCTGGAGGGCTCTCCAGCAGTTTCGCCTCCTGACTCTCACCAGCGTCCTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR TCA 90 bp GGAGGGCAGCTCCGAGGGGACAGGCCTGGCTCACAGGGAAGGAGAGAGGGCTGGTGGATCCTTGGCCTATaGAAGACAGGGGGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: GGQLRGDRPGSQGRREGWWILGL*KTGGSC
Trigger: ACAGGAGCCCCCTGTCTTTCATAGGCCAAGGATCCA...CCAGCCCTCTCTCCTTCCCTGTGAGCCAGGCCTGTCCCCTCGGAGCTGCCCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR TCA 90 bp GGGAGACATCCCCCGCAGGCCTTGGGGTGCTGGAACCCTGGGACGACAGTCATAGCCTGGGGCTTTTGCTaGTTCCTCCAGGGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: GRHPPQALGCWNPGTTVIAWGFC*FLQGLA
Trigger: AGCCAGGCCCTGGAGGAATCAGCAAAAGCCCCAGGC...TATGACTGTCGTCCCAGGGTTCCAGCACCCCAAGGCCTGCGGGGGATGTCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR TCA 90 bp GCAGGGTGTGGGGATAGCAGGAGCAGTTCCAAGACAAGGCCGTGGGGTAGATGTAGGCCAGGACAGCACTaGGGGCATCGGGGCGTGCCC +
Preference number: 4 (lower is better)
Translates to: AGCGDSRSSSKTRPWGRCRPGQH*GHRGVP
Trigger: GGGCACGCCCCGATGCCCTCAGTGCTGTCCTGGCCT...ACATCTACCCCACGGCCTTGTCTTGGAACTGCTCCTGCTATCCCCACACCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000448469.8
CDS-3UTR GCA 90 bp CAGGTGCTGCGGACCACAGACACTTGGCTGCTGACCCCAAGGGCCGTGTGGAGGTCGCTCGCGCCTAGCTaGTCAGTCCTGCAGAGCAGA +
Preference number: 4 (lower is better)
Translates to: QVLRTTDTWLLTPRAVWRSLAPS*SVLQSR
Trigger: TCTGCTCTGCAGGACTGAGCAGCTAGGCGCGAGCGA...CCTCCACACGGCCCTTGGGGTCAGCAGCCAAGTGTCTGTGGTCCGCAGCACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR GCA 90 bp GAGTGCTGCCGAGAGGACGCTGGTGAGAGTCAGGAGGCGAAACTGCTGGAGAGCCATGCCTGGGCGGGCTaGGGGTTCTTGGCAGACCCT +
Preference number: 4 (lower is better)
Translates to: ECCREDAGESQEAKLLESHAWAG*GFLADP
Trigger: AGGGTCTGCCAAGAACCCGCAGCCCGCCCAGGCATG...GCTCTCCAGCAGTTTCGCCTCCTGACTCTCACCAGCGTCCTCTCGGCAGCACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR GCA 90 bp CGCTGGCAAGTCCAGAGGGGTGCACTTGGGCACGGGAGTGCTGCCGAGAGGACGAGGCACTTCCCCTGCTaGTGGATGAGGTGGTCACTG +
Preference number: 4 (lower is better)
Translates to: RWQVQRGALGHGSAAERTRHFPC*WMRWSL
Trigger: CAGTGACCACCTCATCCAGCAGCAGGGGAAGTGCCT...CGTCCTCTCGGCAGCACTCCCGTGCCCAAGTGCACCCCTCTGGACTTGCCAGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR GCA 90 bp GAAACTGCTGGAGAGCCCTCCAGAGCAGGTGCTGCGGACCACAGACACTTGGCTGGCAACAGCTGCCACTaGTGGGCCTGGGCGTCAGCC +
Preference number: 4 (lower is better)
Translates to: ETAGEPSRAGAADHRHLAGNSCH*WAWASA
Trigger: GGCTGACGCCCAGGCCCAGCAGTGGCAGCTGTTGCC...AGCCAAGTGTCTGTGGTCCGCAGCACCTGCTCTGGAGGGCTCTCCAGCAGTTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR GCA 90 bp CTGGGAGACATCCCCCGCAGGCCTTGGGGTGCTGGAACCCTGGGACGACAGTCAGTCAGGAGGCGAAACTaGTGGAGAGCCCTCCAGAGC +
Preference number: 4 (lower is better)
Translates to: LGDIPRRPWGAGTLGRQSVRRRN*WRALQS
Trigger: GCTCTGGAGGGCTCTCCAGCAGTTTCGCCTCCTGAC...TGACTGTCGTCCCAGGGTTCCAGCACCCCAAGGCCTGCGGGGGATGTCTCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR GCA 90 bp CACCCCCTAGTGGGAAGCTGCCTTCTTTGTAGGGATGAAGTGTGGGGCCAGCAGCTGCACCAGCCCCACTaGAGGGCAGGGCCGAGGGTG +
Preference number: 4 (lower is better)
Translates to: HPLVGSCLLCRDEVWGQQLHQPH*RAGPRV
Trigger: CACCCTCGGCCCTGCCCTGCAGTGGGGCTGGTGCAG...CTGCTGGCCCCACACTTCATCCCTACAAAGAAGGCAGCTTCCCACTAGGGGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR CCA 90 bp CAGGTGCTGCGGACCACAGACACTTGGCTGCTGACCCCAAGGGCCGTGTGGAGGAGGCTACGGTCAGGATaGCGATGGCATTGGCGCGGA +
Preference number: 4 (lower is better)
Translates to: QVLRTTDTWLLTPRAVWRRLRSG*RWHWRG
Trigger: TCCGCGCCAATGCCATCGCCATCCTGACCGTAGCCT...CCTCCACACGGCCCTTGGGGTCAGCAGCCAAGTGTCTGTGGTCCGCAGCACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR CCA 90 bp GAGTGCTGCCGAGAGGACGCTGGTGAGAGTCAGGAGGCGAAACTGCTGGAGAGCTCACCCGCTGCAGCATaGGCGGCAGCCACTCGGTGT +
Preference number: 4 (lower is better)
Translates to: ECCREDAGESQEAKLLESSPAAA*AAATRC
Trigger: ACACCGAGTGGCTGCCGCCCATGCTGCAGCGGGTGA...GCTCTCCAGCAGTTTCGCCTCCTGACTCTCACCAGCGTCCTCTCGGCAGCACTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR CCA 90 bp CTGTTGGCCCCCACCAGAGCAGTCAGGAGTTCCTGGGGCACCACAGGGCATGGACTGAACAGCCATGCCTaGGCGGGCTGCGGGTTCTTG +
Preference number: 4 (lower is better)
Translates to: LLAPTRAVRSSWGTTGHGLNSHA*AGCGFL
Trigger: CAAGAACCCGCAGCCCGCCCAGGCATGGCTGTTCAG...TCCATGCCCTGTGGTGCCCCAGGAACTCCTGACTGCTCTGGTGGGGGCCAACAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR CCA 90 bp GTCCAGCACCCTGACCATCTCCTCTCCCGGGGCAAGGCCAGGACAGCACTGAGGAGGAGGCGAAACTGCTaGAGAGCCCTCCAGAGCAGG +
Preference number: 4 (lower is better)
Translates to: VQHPDHLLSRGKARTALRRRRNC*RALQSR
Trigger: CCTGCTCTGGAGGGCTCTCCAGCAGTTTCGCCTCCT...CCTCAGTGCTGTCCTGGCCTTGCCCCGGGAGAGGAGATGGTCAGGGTGCTGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448469.8
CDS-3UTR TCA 90 bp CGCTGGCAAGTCCAGAGGGGTGCACTTGGGCACGGGAGTGCTGCCGAGAGGACGAGATTCCTCCAGCTATaGCAGGCGTCCTTATGGGCC +
Preference number: 4 (lower is better)
Translates to: RWQVQRGALGHGSAAERTRFLQL*QASLWA
Trigger: GGCCCATAAGGACGCCTGTCATAGCTGGAGGAATCT...CGTCCTCTCGGCAGCACTCCCGTGCCCAAGTGCACCCCTCTGGACTTGCCAGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR TCA 90 bp CAGGTGCTGCGGACCACAGACACTTGGCTGCTGACCCCAAGGGCCGTGTGGAGGGGCCTGGCTAAAGGCTaGCAGCCTTATCTCCTAGGG +
Preference number: 4 (lower is better)
Translates to: QVLRTTDTWLLTPRAVWRGLAKG*QPYLLG
Trigger: CCCTAGGAGATAAGGCTGTCAGCCTTTAGCCAGGCC...CCTCCACACGGCCCTTGGGGTCAGCAGCCAAGTGTCTGTGGTCCGCAGCACCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR TCA 90 bp CCTCCAGCAATGCCCAGCTGGAGAGAGTATGGCCATCCTCACCCCAGGGAGTCGCCATTCCCTGGGTGGTaGGGGAGCCCTCCAAGACAG +
Preference number: 4 (lower is better)
Translates to: PPAMPSWREYGHPHPRESPFPGW*GSPPRQ
Trigger: CTGTCTTGGAGGGCTCCCTCACCACCCAGGGAATGG...CGACTCCCTGGGGTGAGGATGGCCATACTCTCTCCAGCTGGGCATTGCTGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR GCA 90 bp CACCCCCTAGTGGGAAGCTGCCTTCTTTGTAGGGATGAAGTGTGGGGCCAGCAGGCCGCCGGAGGATGCTaGGTGGGCTCGGTTGTCCTG +
Preference number: 4 (lower is better)
Translates to: HPLVGSCLLCRDEVWGQQAAGGC*VGSVVL
Trigger: CAGGACAACCGAGCCCACGCAGCATCCTCCGGCGGC...CTGCTGGCCCCACACTTCATCCCTACAAAGAAGGCAGCTTCCCACTAGGGGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR GCA 90 bp GCTCAAGGATTTGCCCTCAGAGAGGTGGGTGCTCTAGGTGCAGGAGACACTGCACCGGCCGCCGGAGGATaGTGCGTGGGCTCGGTTGTC +
Preference number: 4 (lower is better)
Translates to: AQGFALREVGALGAGDTAPAAGG*CVGSVV
Trigger: GACAACCGAGCCCACGCAGCATCCTCCGGCGGCCGG...TGCAGTGTCTCCTGCACCTAGAGCACCCACCTCTCTGAGGGCAAATCCTTGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR GCA 90 bp GCCCTCTGCCTTAGATGGGGCTCTTGTTCTGCAGGTCACCATAGTTCCTGCCTGCGGTCCTCGCGGAGCTaGTCCGACCTCCTGCCTGCC +
Preference number: 4 (lower is better)
Translates to: ALCLRWGSCSAGHHSSCLRSSRS*SDLLPA
Trigger: GGCAGGCAGGAGGTCGGAGCAGCTCCGCGAGGACCG...CAGGCAGGAACTATGGTGACCTGCAGAACAAGAGCCCCATCTAAGGCAGAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR GCA 90 bp GGCCCGGATTCCAGAAGGCATTGGCAGTGGGATAGCTGGCTCATCCTGTCCTCCCATGCCTGGGCGGGCTaGGGGTTCTTGGCAGACCCT +
Preference number: 4 (lower is better)
Translates to: GPDSRRHWQWDSWLILSSHAWAG*GFLADP
Trigger: AGGGTCTGCCAAGAACCCGCAGCCCGCCCAGGCATG...GGAGGACAGGATGAGCCAGCTATCCCACTGCCAATGCCTTCTGGAATCCGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR GCA 90 bp CCTCCAGCAATGCCCAGCTGGAGAGAGTATGGCCATCCTCACCCCAGGGAGTCGGTCACTGAACAGCCATaGCTGGGCGGGCTGCGGGTT +
Preference number: 4 (lower is better)
Translates to: PPAMPSWREYGHPHPRESVTEQP*LGGLRV
Trigger: AACCCGCAGCCCGCCCAGGCATGGCTGTTCAGTGAC...CGACTCCCTGGGGTGAGGATGGCCATACTCTCTCCAGCTGGGCATTGCTGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR GCA 90 bp CACCTGTTGGCCCCCACCAGAGCAGTCAGGAGTTCCTGGGGCACCACAGGGCATCGTCAGCCTGACACTTaGTGGTCACCAGCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: HLLAPTRAVRSSWGTTGHRQPDT*WSPAGQ
Trigger: CTGCCCAGCTGGTGACCAGCAAGTGTCAGGCTGACG...ATGCCCTGTGGTGCCCCAGGAACTCCTGACTGCTCTGGTGGGGGCCAACAGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR GCA 90 bp GAGTGCTGCCGAGAGGACGCTGGTGAGAGTCAGGAGGCGAAACTGCTGGAGAGCACTTGGGCACGGGAGTaGTGCCGAGAGGACGCTGGT +
Preference number: 4 (lower is better)
Translates to: ECCREDAGESQEAKLLESTWARE*CREDAG
Trigger: ACCAGCGTCCTCTCGGCAGCACTCCCGTGCCCAAGT...GCTCTCCAGCAGTTTCGCCTCCTGACTCTCACCAGCGTCCTCTCGGCAGCACTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR GCA 90 bp GAAGGGGCCTGCGCTGGCAAGTCCAGAGGGGTGCACTTGGGCACGGGAGTGCTGGAGGGCAGAAATGGTTaGGTCCAGGAGAGGCTAGTG +
Preference number: 4 (lower is better)
Translates to: EGACAGKSRGVHLGTGVLEGRNG*VQERLV
Trigger: CACTAGCCTCTCCTGGACGCAACCATTTCTGCCCTC...CAGCACTCCCGTGCCCAAGTGCACCCCTCTGGACTTGCCAGCGCAGGCCCCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR GCA 90 bp CCTGGCTGCGGAAGAAACATCACGACAGAGGACAGGCAAAGCATGGCCCTGGGATCCCCTGGCCCTGCCTaGCTGCACAGCTGGGCCTCA +
Preference number: 4 (lower is better)
Translates to: PGCGRNITTEDRQSMALGSPGPA*LHSWAS
Trigger: TGAGGCCCAGCTGTGCAGGCAGGCAGGGCCAGGGGA...TCCCAGGGCCATGCTTTGCCTGTCCTCTGTCGTGATGTTTCTTCCGCAGCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448469.8
CDS-3UTR CCA 90 bp GAAACTGCTGGAGAGCCCTCCAGAGCAGGTGCTGCGGACCACAGACACTTGGCTGGATCTTCCTCATGGTaGGCAGACGGGCGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: ETAGEPSRAGAADHRHLAGSSSW*ADGRPR
Trigger: CCTGGGGCGCCCGTCTGCCCACCATGAGGAAGATCC...AGCCAAGTGTCTGTGGTCCGCAGCACCTGCTCTGGAGGGCTCTCCAGCAGTTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR CCA 90 bp CAGGTGCTGCGGACCACAGACACTTGGCTGCTGACCCCAAGGGCCGTGTGGAGGCAGCCTTCAGCTGCTTaGCCGACAGGTAGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: QVLRTTDTWLLTPRAVWRQPSAA*PTGRPS
Trigger: AGAAGGCCTACCTGTCGGCCAAGCAGCTGAAGGCTG...CCTCCACACGGCCCTTGGGGTCAGCAGCCAAGTGTCTGTGGTCCGCAGCACCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR CCA 90 bp GGGAGACTGGAGGTCTCGCATCACAGAGTCATGCAGGGGCTCCTGGTCAGTGCCCCGGATGGGCCGGTCTaGGCTCAGCTTGTCACTCTC +
Preference number: 4 (lower is better)
Translates to: GRLEVSHHRVMQGLLVSAPDGPV*AQLVTL
Trigger: GAGAGTGACAAGCTGAGCCCAGACCGGCCCATCCGG...GGCACTGACCAGGAGCCCCTGCATGACTCTGTGATGCGAGACCTCCAGTCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR CCA 90 bp TTGGCCTATGAAAGACAGGGGGCTCCTGTGGTAGGTATATCTGCCCCAGGCTGGGGCGGGTGTCCCGGATaGGCCGGTCTGGGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: LAYERQGAPVVGISAPGWGGCPG*AGLGSA
Trigger: AGCTGAGCCCAGACCGGCCCATCCGGGACACCCGCC...CCAGCCTGGGGCAGATATACCTACCACAGGAGCCCCCTGTCTTTCATAGGCCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR CCA 90 bp GAGAAGCTGGCTGGGTTGCCCCCTCCTTCTGGAGGAGCACTGACTCAGACCATCCTCACCACGCGGGTGTaGTCCTCCTTCACCCGCTGC +
Preference number: 4 (lower is better)
Translates to: EKLAGLPPPSGGALTQTILTTRV*SSFTRC
Trigger: GCAGCGGGTGAAGGAGGACCACACCCGCGTGGTGAG...GATGGTCTGAGTCAGTGCTCCTCCAGAAGGAGGGGGCAACCCAGCCAGCTTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR CCA 90 bp CAGGTGCTGCGGACCACAGACACTTGGCTGCTGACCCCAAGGGCCGTGTGGAGGTCCTTATGGGCCTGGTaGGGTCTGTCCGGGTCATCT +
Preference number: 4 (lower is better)
Translates to: QVLRTTDTWLLTPRAVWRSLWAW*GLSGSS
Trigger: AGATGACCCGGACAGACCCCACCAGGCCCATAAGGA...CCTCCACACGGCCCTTGGGGTCAGCAGCCAAGTGTCTGTGGTCCGCAGCACCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR CCA 90 bp CCTCCAGCAATGCCCAGCTGGAGAGAGTATGGCCATCCTCACCCCAGGGAGTCGCGGGCTGCGGGTTCTTaGCAGACCCTCTGCAGATCC +
Preference number: 4 (lower is better)
Translates to: PPAMPSWREYGHPHPRESRAAGS*QTLCRS
Trigger: GGATCTGCAGAGGGTCTGCCAAGAACCCGCAGCCCG...CGACTCCCTGGGGTGAGGATGGCCATACTCTCTCCAGCTGGGCATTGCTGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR CCA 90 bp CTGGGAGACATCCCCCGCAGGCCTTGGGGTGCTGGAACCCTGGGACGACAGTCACCTCCGTCATGTGTGTaGCAACAGCTGCCACTGCTG +
Preference number: 4 (lower is better)
Translates to: LGDIPRRPWGAGTLGRQSPPSCV*QQLPLL
Trigger: CAGCAGTGGCAGCTGTTGCCACACACATGACGGAGG...TGACTGTCGTCCCAGGGTTCCAGCACCCCAAGGCCTGCGGGGGATGTCTCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR CCA 90 bp GCAGGGTGTGGGGATAGCAGGAGCAGTTCCAAGACAAGGCCGTGGGGTAGATGTGGCAAAGCATGGCCCTaGGAGCGAAGGGGCCTGCGC +
Preference number: 4 (lower is better)
Translates to: AGCGDSRSSSKTRPWGRCGKAWP*ERRGLR
Trigger: GCGCAGGCCCCTTCGCTCCCAGGGCCATGCTTTGCC...ACATCTACCCCACGGCCTTGTCTTGGAACTGCTCCTGCTATCCCCACACCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR CCA 90 bp AAGGGGCCTGCGCTGGCAAGTCCAGAGGGGTGCACTTGGGCACGGGAGTGCTGCATTAGAGAAGCTGGCTaGGTTGCCCCCTCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: KGPALASPEGCTWARECCIREAG*VAPSFW
Trigger: CCAGAAGGAGGGGGCAACCCAGCCAGCTTCTCTAAT...GCAGCACTCCCGTGCCCAAGTGCACCCCTCTGGACTTGCCAGCGCAGGCCCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR CCA 90 bp CAGGTGCTGCGGACCACAGACACTTGGCTGCTGACCCCAAGGGCCGTGTGGAGGGGGGCTGGTAAAGTGTaGAAGGGACTGTGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: QVLRTTDTWLLTPRAVWRGAGKV*KGLCPG
Trigger: CCCAGGACACAGTCCCTTCCACACTTTACCAGCCCC...CCTCCACACGGCCCTTGGGGTCAGCAGCCAAGTGTCTGTGGTCCGCAGCACCTG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000448469.8
CDS-3UTR CCA 90 bp GCCGGAGGGAGAGGCTGTGGCTGCTTTCCAGAATGGCACAGCAAACTGCTGTTCGAGACCCAGCCTCTCTaGGCCCACATGGCCCCCGCA +
Preference number: 4 (lower is better)
Translates to: AGGRGCGCFPEWHSKLLFETQPL*AHMAPA
Trigger: TGCGGGGGCCATGTGGGCCCAGAGAGGCTGGGTCTC...GAACAGCAGTTTGCTGTGCCATTCTGGAAAGCAGCCACAGCCTCTCCCTCCGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR TCA 90 bp TCTGGCCCTGGTGCAGAAGTCCCTTCTGCTGCCCTGCCCATAGGCTTTCGGGGGGAGTTCCTGTCACAATaGGCGGGATGGTGCGGTCCT +
Preference number: 4 (lower is better)
Translates to: SGPGAEVPSAALPIGFRGEFLSQ*AGWCGP
Trigger: AGGACCGCACCATCCCGCTCATTGTGACAGGAACTC...CCCCCGAAAGCCTATGGGCAGGGCAGCAGAAGGGACTTCTGCACCAGGGCCAGA
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR TCA 90 bp TCTGGTCAGCAGTCCTCTTACATTCAACAGGCGCAGCCCCGGCTCCCCAGCCCCGAGTTCCTGTCACAATaGGCGGGATGGTGCGGTCCT +
Preference number: 4 (lower is better)
Translates to: SGQQSSYIQQAQPRLPSPEFLSQ*AGWCGP
Trigger: AGGACCGCACCATCCCGCTCATTGTGACAGGAACTC...GGGGCTGGGGAGCCGGGGCTGCGCCTGTTGAATGTAAGAGGACTGCTGACCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR TCA 90 bp CACCTGTTGGCCCCCACCAGAGCAGTCAGGAGTTCCTGGGGCACCACAGGGCATCATTGCGCAGGCACTTaGCCTTGGGGATCCTGGTCA +
Preference number: 4 (lower is better)
Translates to: HLLAPTRAVRSSWGTTGHHCAGT*PWGSWS
Trigger: TGACCAGGATCCCCAAGGTCAAGTGCCTGCGCAATG...ATGCCCTGTGGTGCCCCAGGAACTCCTGACTGCTCTGGTGGGGGCCAACAGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR TCA 90 bp CCTCTTGAAGGCCCTCTGGTCAGCAGTCCTCTTACATTCAACAGGCGCAGCCCCAGGGGTGCCGTTTCCTaGAGACATGGCCCACCCGGC +
Preference number: 4 (lower is better)
Translates to: PLEGPLVSSPLTFNRRSPRGAVS*RHGPPG
Trigger: GCCGGGTGGGCCATGTCTTCAGGAAACGGCACCCCT...GGGGCTGCGCCTGTTGAATGTAAGAGGACTGCTGACCAGAGGGCCTTCAAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR TCA 90 bp GGGAGACATCCCCCGCAGGCCTTGGGGTGCTGGAACCCTGGGACGACAGTCATATGCACATCTGCAGTATaGCTGGGGATCCAGGGGAGG +
Preference number: 4 (lower is better)
Translates to: GRHPPQALGCWNPGTTVICTSAV*LGIQGR
Trigger: CCTCCCCTGGATCCCCAGTCATACTGCAGATGTGCA...TATGACTGTCGTCCCAGGGTTCCAGCACCCCAAGGCCTGCGGGGGATGTCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR TCA 90 bp CAGGTGCTGCGGACCACAGACACTTGGCTGCTGACCCCAAGGGCCGTGTGGAGGGTCCTGGCAGAAATGTaGGGAGATGGGAACAGCCCA +
Preference number: 4 (lower is better)
Translates to: QVLRTTDTWLLTPRAVWRVLAEM*GDGNSP
Trigger: TGGGCTGTTCCCATCTCCTCACATTTCTGCCAGGAC...CCTCCACACGGCCCTTGGGGTCAGCAGCCAAGTGTCTGTGGTCCGCAGCACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448469.8
CDS-3UTR TCA 90 bp GGCCCGGATTCCAGAAGGCATTGGCAGTGGGATAGCTGGCTCATCCTGTCCTCCTGGACAGGGAGCAGCTaGGGGGAGAGAGATGAGCCC +
Preference number: 4 (lower is better)
Translates to: GPDSRRHWQWDSWLILSSWTGSS*GERDEP
Trigger: GGGCTCATCTCTCTCCCCTCAGCTGCTCCCTGTCCA...GGAGGACAGGATGAGCCAGCTATCCCACTGCCAATGCCTTCTGGAATCCGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR GCA 90 bp CCTGGCTGCGGAAGAAACATCACGACAGAGGACAGGCAAAGCATGGCCCTGGGAGGTGAGAACGGTAGCTaGAGCCACGTCCGCCCCACG +
Preference number: 4 (lower is better)
Translates to: PGCGRNITTEDRQSMALGGENGS*SHVRPT
Trigger: CGTGGGGCGGACGTGGCTGCAGCTACCGTTCTCACC...TCCCAGGGCCATGCTTTGCCTGTCCTCTGTCGTGATGTTTCTTCCGCAGCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR GCA 90 bp GGTCTGCTTTGTAGGGGAGACCCCCAGGGTCCTGGTACCAACAGTCATTTGCCCTCCTCCTTCACCCGCTaGAGCATGGGCGGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: GLLCRGDPQGPGTNSHLPSSFTR*SMGGSH
Trigger: GTGGCTGCCGCCCATGCTGCAGCGGGTGAAGGAGGA...GGGCAAATGACTGTTGGTACCAGGACCCTGGGGGTCTCCCCTACAAAGCAGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR GCA 90 bp CCTGGCTGCGGAAGAAACATCACGACAGAGGACAGGCAAAGCATGGCCCTGGGATCCTCCTTCACCCGCTaGAGCATGGGCGGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: PGCGRNITTEDRQSMALGSSFTR*SMGGSH
Trigger: GTGGCTGCCGCCCATGCTGCAGCGGGTGAAGGAGGA...TCCCAGGGCCATGCTTTGCCTGTCCTCTGTCGTGATGTTTCTTCCGCAGCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR GCA 90 bp GCCGGAGGGAGAGGCTGTGGCTGCTTTCCAGAATGGCACAGCAAACTGCTGTTCTCCTCCTTCACCCGCTaGAGCATGGGCGGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: AGGRGCGCFPEWHSKLLFSSFTR*SMGGSH
Trigger: GTGGCTGCCGCCCATGCTGCAGCGGGTGAAGGAGGA...GAACAGCAGTTTGCTGTGCCATTCTGGAAAGCAGCCACAGCCTCTCCCTCCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR GCA 90 bp TCTGGTCAGCAGTCCTCTTACATTCAACAGGCGCAGCCCCGGCTCCCCAGCCCCAATGATGCCGGGGAGTaGTTCCTTCACGGGGACCGT +
Preference number: 4 (lower is better)
Translates to: SGQQSSYIQQAQPRLPSPNDAGE*FLHGDR
Trigger: ACGGTCCCCGTGAAGGAAGCACTCCCCGGCATCATT...GGGGCTGGGGAGCCGGGGCTGCGCCTGTTGAATGTAAGAGGACTGCTGACCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR GCA 90 bp GAGAGGACGCTGGTGAGAGTCAGGAGGCGAAACTGCTGGAGAGCCCTCCAGAGCCGTCAGCCTGACACTTaGTGGTCACCAGCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: ERTLVRVRRRNCWRALQSRQPDT*WSPAGQ
Trigger: CTGCCCAGCTGGTGACCAGCAAGTGTCAGGCTGACG...GCTCTGGAGGGCTCTCCAGCAGTTTCGCCTCCTGACTCTCACCAGCGTCCTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR GCA 90 bp GTCCAGCACCCTGACCATCTCCTCTCCCGGGGCAAGGCCAGGACAGCACTGAGGGAGGCTGCACCTGGCTaGGGAAGAAACATCACGACA +
Preference number: 4 (lower is better)
Translates to: VQHPDHLLSRGKARTALREAAPG*GRNITT
Trigger: TGTCGTGATGTTTCTTCCGCAGCCAGGTGCAGCCTC...CCTCAGTGCTGTCCTGGCCTTGCCCCGGGAGAGGAGATGGTCAGGGTGCTGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448469.8
CDS-3UTR GCA 90 bp CCTGGCTGCGGAAGAAACATCACGACAGAGGACAGGCAAAGCATGGCCCTGGGAAGCCCCAAAGGTCCATaGCCGAGTGTGGCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: PGCGRNITTEDRQSMALGSPKGP*PSVAQA
Trigger: GGCCTGGGCCACACTCGGGCATGGACCTTTGGGGCT...TCCCAGGGCCATGCTTTGCCTGTCCTCTGTCGTGATGTTTCTTCCGCAGCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR GCA 90 bp CCTCTTGAAGGCCCTCTGGTCAGCAGTCCTCTTACATTCAACAGGCGCAGCCCCGTGGGTGGTGGGCTGTaGTCCCTGAGAGGACGGAGG +
Preference number: 4 (lower is better)
Translates to: PLEGPLVSSPLTFNRRSPVGGGL*SLRGRR
Trigger: CCTCCGTCCTCTCAGGGAGCACAGCCCACCACCCAC...GGGGCTGCGCCTGTTGAATGTAAGAGGACTGCTGACCAGAGGGCCTTCAAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR CCA 90 bp GGTCTGCTTTGTAGGGGAGACCCCCAGGGTCCTGGTACCAACAGTCATTTGCCCCAGGCCACTGCGCACTaGGAGAGAAGCGCGCCGAGT +
Preference number: 4 (lower is better)
Translates to: GLLCRGDPQGPGTNSHLPQATAH*ERSAPS
Trigger: ACTCGGCGCGCTTCTCTCCCAGTGCGCAGTGGCCTG...GGGCAAATGACTGTTGGTACCAGGACCCTGGGGGTCTCCCCTACAAAGCAGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR CCA 90 bp GGTCTGCTTTGTAGGGGAGACCCCCAGGGTCCTGGTACCAACAGTCATTTGCCCGGATCTTCCTCATGGTaGGCAGACGGGCGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: GLLCRGDPQGPGTNSHLPGSSSW*ADGRPR
Trigger: CCTGGGGCGCCCGTCTGCCCACCATGAGGAAGATCC...GGGCAAATGACTGTTGGTACCAGGACCCTGGGGGTCTCCCCTACAAAGCAGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR CCA 90 bp GTGGCTTCAATCCAGAGCAGAGGTTCAGGCCCTTTGGGGATCAGGGACCTCTTTGGCGGGTGTCCCGGATaGGCCGGTCTGGGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: VASIQSRGSGPLGIRDLFGGCPG*AGLGSA
Trigger: AGCTGAGCCCAGACCGGCCCATCCGGGACACCCGCC...AAAGAGGTCCCTGATCCCCAAAGGGCCTGAACCTCTGCTCTGGATTGAAGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR CCA 90 bp GCAGGGTGTGGGGATAGCAGGAGCAGTTCCAAGACAAGGCCGTGGGGTAGATGTTCACCCGCTGCAGCATaGGCGGCAGCCACTCGGTGT +
Preference number: 4 (lower is better)
Translates to: AGCGDSRSSSKTRPWGRCSPAAA*AAATRC
Trigger: ACACCGAGTGGCTGCCGCCCATGCTGCAGCGGGTGA...ACATCTACCCCACGGCCTTGTCTTGGAACTGCTCCTGCTATCCCCACACCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR CCA 90 bp GAGAAGCTGGCTGGGTTGCCCCCTCCTTCTGGAGGAGCACTGACTCAGACCATCGCGTCCTTATGGGCCTaGTGGGGTCTGTCCGGGTCA +
Preference number: 4 (lower is better)
Translates to: EKLAGLPPPSGGALTQTIASLWA*WGLSGS
Trigger: TGACCCGGACAGACCCCACCAGGCCCATAAGGACGC...GATGGTCTGAGTCAGTGCTCCTCCAGAAGGAGGGGGCAACCCAGCCAGCTTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR CCA 90 bp CAGGTGCTGCGGACCACAGACACTTGGCTGCTGACCCCAAGGGCCGTGTGGAGGACATTAAGGTGGAGGTaGCAGCCAGGCACTTCCCCT +
Preference number: 4 (lower is better)
Translates to: QVLRTTDTWLLTPRAVWRTLRWR*QPGTSP
Trigger: AGGGGAAGTGCCTGGCTGCCACCTCCACCTTAATGT...CCTCCACACGGCCCTTGGGGTCAGCAGCCAAGTGTCTGTGGTCCGCAGCACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR CCA 90 bp AAGGGGCCTGCGCTGGCAAGTCCAGAGGGGTGCACTTGGGCACGGGAGTGCTGCGGGTATGTGGATCCTTaGCCTATGAAAGACAGGGGG +
Preference number: 4 (lower is better)
Translates to: KGPALASPEGCTWARECCGYVDP*PMKDRG
Trigger: CCCCCTGTCTTTCATAGGCCAAGGATCCACATACCC...GCAGCACTCCCGTGCCCAAGTGCACCCCTCTGGACTTGCCAGCGCAGGCCCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR CCA 90 bp CCTCTTGAAGGCCCTCTGGTCAGCAGTCCTCTTACATTCAACAGGCGCAGCCCCCGAAGGGGCCTGCGCTaGCAAGTCCAGAGGGGTGCA +
Preference number: 4 (lower is better)
Translates to: PLEGPLVSSPLTFNRRSPRRGLR*QVQRGA
Trigger: TGCACCCCTCTGGACTTGCCAGCGCAGGCCCCTTCG...GGGGCTGCGCCTGTTGAATGTAAGAGGACTGCTGACCAGAGGGCCTTCAAGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR CCA 90 bp GAGAAGCTGGCTGGGTTGCCCCCTCCTTCTGGAGGAGCACTGACTCAGACCATCCCGAGGGGACAGGCCTaGCTCACAGGGAAGGAGAGA +
Preference number: 4 (lower is better)
Translates to: EKLAGLPPPSGGALTQTIPRGQA*LTGKER
Trigger: TCTCTCCTTCCCTGTGAGCCAGGCCTGTCCCCTCGG...GATGGTCTGAGTCAGTGCTCCTCCAGAAGGAGGGGGCAACCCAGCCAGCTTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR CCA 90 bp CACCTGTTGGCCCCCACCAGAGCAGTCAGGAGTTCCTGGGGCACCACAGGGCATAGGCTAGTGGTGTGCTaGCCTGCCAGCTGCAGTTCA +
Preference number: 4 (lower is better)
Translates to: HLLAPTRAVRSSWGTTGHRLVVC*PASCSS
Trigger: TGAACTGCAGCTGGCAGGCCAGCACACCACTAGCCT...ATGCCCTGTGGTGCCCCAGGAACTCCTGACTGCTCTGGTGGGGGCCAACAGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR CCA 90 bp CTGTTGGCCCCCACCAGAGCAGTCAGGAGTTCCTGGGGCACCACAGGGCATGGAATGGGAGTCTGGCCCTaGTGCAGAAGTCCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: LLAPTRAVRSSWGTTGHGMGVWP*CRSPFC
Trigger: GCAGAAGGGACTTCTGCACCAGGGCCAGACTCCCAT...TCCATGCCCTGTGGTGCCCCAGGAACTCCTGACTGCTCTGGTGGGGGCCAACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR CCA 90 bp CAGGTGCTGCGGACCACAGACACTTGGCTGCTGACCCCAAGGGCCGTGTGGAGGTCCTTTCCTGTTCCCTaGTGGGAGAAGGACCACACC +
Preference number: 4 (lower is better)
Translates to: QVLRTTDTWLLTPRAVWRSFPVP*WEKDHT
Trigger: GGTGTGGTCCTTCTCCCACCAGGGAACAGGAAAGGA...CCTCCACACGGCCCTTGGGGTCAGCAGCCAAGTGTCTGTGGTCCGCAGCACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR CCA 90 bp CTGTTGGCCCCCACCAGAGCAGTCAGGAGTTCCTGGGGCACCACAGGGCATGGAGTTGCCCCCTCCTTCTaGAGGAGCACTGACTCAGAC +
Preference number: 4 (lower is better)
Translates to: LLAPTRAVRSSWGTTGHGVAPSF*RSTDSD
Trigger: GTCTGAGTCAGTGCTCCTCCAGAAGGAGGGGGCAAC...TCCATGCCCTGTGGTGCCCCAGGAACTCCTGACTGCTCTGGTGGGGGCCAACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR CCA 90 bp GAAGGGGCCTGCGCTGGCAAGTCCAGAGGGGTGCACTTGGGCACGGGAGTGCTGGTGAGCCACTGCGCCTaGCTTGAATGGGTCTTAAAG +
Preference number: 4 (lower is better)
Translates to: EGACAGKSRGVHLGTGVLVSHCA*LEWVLK
Trigger: CTTTAAGACCCATTCAAGCCAGGCGCAGTGGCTCAC...CAGCACTCCCGTGCCCAAGTGCACCCCTCTGGACTTGCCAGCGCAGGCCCCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337827.8
3UTR CAA 72 bp CCCAGGCCTTCTAGTCCATCCTCTGGGGAGAGGCCTTaGCCCTGGGCCCAGTTCTGTCCTAAGCTGTGGCAG +
Preference number: 4 (lower is better)
Translates to: PRPSSPSSGERP*PWAQFCPKLWQ
Trigger: CTGCCACAGCTTAGGACAGAACTGGGCCCAGGGCAAAGGCCTCTCCCCAGAGGATGGACTAGAAGGCCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR TCA 90 bp CTGTTGGCCCCCACCAGAGCAGTCAGGAGTTCCTGGGGCACCACAGGGCATGGAGGATCTGCTCCCACTTaGAATGCAGGCTCCAGTCGA +
Preference number: 4 (lower is better)
Translates to: LLAPTRAVRSSWGTTGHGGSAPT*NAGSSR
Trigger: TCGACTGGAGCCTGCATTTCAAGTGGGAGCAGATCC...TCCATGCCCTGTGGTGCCCCAGGAACTCCTGACTGCTCTGGTGGGGGCCAACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR TCA 90 bp CCTGGCTGCGGAAGAAACATCACGACAGAGGACAGGCAAAGCATGGCCCTGGGACAAGAGCCAGTGGGGTaGGGAAGCAGGGTGTGGGGA +
Preference number: 4 (lower is better)
Translates to: PGCGRNITTEDRQSMALGQEPVG*GSRVWG
Trigger: TCCCCACACCCTGCTTCCTCACCCCACTGGCTCTTG...TCCCAGGGCCATGCTTTGCCTGTCCTCTGTCGTGATGTTTCTTCCGCAGCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR TCA 90 bp AAGGGGCCTGCGCTGGCAAGTCCAGAGGGGTGCACTTGGGCACGGGAGTGCTGCAGCCCTTGTAAAAACTaGAGCCAAGTCACAGAGGCC +
Preference number: 4 (lower is better)
Translates to: KGPALASPEGCTWARECCSPCKN*SQVTEA
Trigger: GGCCTCTGTGACTTGGCTTCAGTTTTTACAAGGGCT...GCAGCACTCCCGTGCCCAAGTGCACCCCTCTGGACTTGCCAGCGCAGGCCCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR TCA 90 bp GAAGGGGCCTGCGCTGGCAAGTCCAGAGGGGTGCACTTGGGCACGGGAGTGCTGCTAAGTGCCTGGCAGTaGAGACCTCTTCCCATTAGA +
Preference number: 4 (lower is better)
Translates to: EGACAGKSRGVHLGTGVLLSAWQ*RPLPIR
Trigger: TCTAATGGGAAGAGGTCTTCACTGCCAGGCACTTAG...CAGCACTCCCGTGCCCAAGTGCACCCCTCTGGACTTGCCAGCGCAGGCCCCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR GCA 90 bp CCTCTTGAAGGCCCTCTGGTCAGCAGTCCTCTTACATTCAACAGGCGCAGCCCCGTCACTGAACAGCCATaGCTGGGCGGGCTGCGGGTT +
Preference number: 4 (lower is better)
Translates to: PLEGPLVSSPLTFNRRSPVTEQP*LGGLRV
Trigger: AACCCGCAGCCCGCCCAGGCATGGCTGTTCAGTGAC...GGGGCTGCGCCTGTTGAATGTAAGAGGACTGCTGACCAGAGGGCCTTCAAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR GCA 90 bp GAAACTGCTGGAGAGCCCTCCAGAGCAGGTGCTGCGGACCACAGACACTTGGCTGCCAGGCACTTCCCCTaGTGCTGGATGAGGTGGTCA +
Preference number: 4 (lower is better)
Translates to: ETAGEPSRAGAADHRHLAARHFP*CWMRWS
Trigger: TGACCACCTCATCCAGCAGCAGGGGAAGTGCCTGGC...AGCCAAGTGTCTGTGGTCCGCAGCACCTGCTCTGGAGGGCTCTCCAGCAGTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR GCA 90 bp CAGACAGTGGCTTCAATCCAGAGCAGAGGTTCAGGCCCTTTGGGGATCAGGGACTGGGCACGGGAGTGCTaGCGAGAGGACGCTGGTGAG +
Preference number: 4 (lower is better)
Translates to: QTVASIQSRGSGPLGIRDWAREC*REDAGE
Trigger: CTCACCAGCGTCCTCTCGGCAGCACTCCCGTGCCCA...GTCCCTGATCCCCAAAGGGCCTGAACCTCTGCTCTGGATTGAAGCCACTGTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR GCA 90 bp GTAGGCGGTGGGTGGTGGGCTGTGCTCCCTGAGAGGACGGAGGGGTGGATGGGGCCAGGAAGTATGTCCTaGCTGAATTTGTACCACTGC +
Preference number: 4 (lower is better)
Translates to: VGGGWWAVLPERTEGWMGPGSMS*LNLYHC
Trigger: GCAGTGGTACAAATTCAGGCAGGACATACTTCCTGG...CCCCATCCACCCCTCCGTCCTCTCAGGGAGCACAGCCCACCACCCACCGCCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR GCA 90 bp CAGGTGCTGCGGACCACAGACACTTGGCTGCTGACCCCAAGGGCCGTGTGGAGGAGTGGTGTGCTGGCCTaGCAGCTGCAGTTCATATGT +
Preference number: 4 (lower is better)
Translates to: QVLRTTDTWLLTPRAVWRSGVLA*QLQFIC
Trigger: ACATATGAACTGCAGCTGGCAGGCCAGCACACCACT...CCTCCACACGGCCCTTGGGGTCAGCAGCCAAGTGTCTGTGGTCCGCAGCACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR GCA 90 bp GGGAGACATCCCCCGCAGGCCTTGGGGTGCTGGAACCCTGGGACGACAGTCATAAGAAGTCCCTTCTGCTaGCCTGCCCATAGGCTTTCG +
Preference number: 4 (lower is better)
Translates to: GRHPPQALGCWNPGTTVIRSPFC*PAHRLS
Trigger: CGAAAGCCTATGGGCAGGGCAGCAGAAGGGACTTCT...TATGACTGTCGTCCCAGGGTTCCAGCACCCCAAGGCCTGCGGGGGATGTCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR CCA 90 bp CCTCTTGAAGGCCCTCTGGTCAGCAGTCCTCTTACATTCAACAGGCGCAGCCCCCCGGATGGGCCGGTCTaGGCTCAGCTTGTCACTCTC +
Preference number: 4 (lower is better)
Translates to: PLEGPLVSSPLTFNRRSPPDGPV*AQLVTL
Trigger: GAGAGTGACAAGCTGAGCCCAGACCGGCCCATCCGG...GGGGCTGCGCCTGTTGAATGTAAGAGGACTGCTGACCAGAGGGCCTTCAAGAGG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR CCA 90 bp GAAACTGCTGGAGAGCCCTCCAGAGCAGGTGCTGCGGACCACAGACACTTGGCTGATGACGCTGGTGGCTaGCAGGTCCGAGGAGTAGGA +
Preference number: 4 (lower is better)
Translates to: ETAGEPSRAGAADHRHLADDAGG*QVRGVG
Trigger: TCCTACTCCTCGGACCTGCCAGCCACCAGCGTCATC...AGCCAAGTGTCTGTGGTCCGCAGCACCTGCTCTGGAGGGCTCTCCAGCAGTTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR CCA 90 bp GCTCAAGGATTTGCCCTCAGAGAGGTGGGTGCTCTAGGTGCAGGAGACACTGCACTCACCACGCGGGTGTaGTCCTCCTTCACCCGCTGC +
Preference number: 4 (lower is better)
Translates to: AQGFALREVGALGAGDTALTTRV*SSFTRC
Trigger: GCAGCGGGTGAAGGAGGACCACACCCGCGTGGTGAG...TGCAGTGTCTCCTGCACCTAGAGCACCCACCTCTCTGAGGGCAAATCCTTGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR CCA 90 bp GAGTGCTGCCGAGAGGACGCTGGTGAGAGTCAGGAGGCGAAACTGCTGGAGAGCTCCTTATGGGCCTGGTaGGGTCTGTCCGGGTCATCT +
Preference number: 4 (lower is better)
Translates to: ECCREDAGESQEAKLLESSLWAW*GLSGSS
Trigger: AGATGACCCGGACAGACCCCACCAGGCCCATAAGGA...GCTCTCCAGCAGTTTCGCCTCCTGACTCTCACCAGCGTCCTCTCGGCAGCACTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR CCA 90 bp GTGCCTGGCAGTGAAGACCTCTTCCCATTAGAGAAGCTGGCTGGGTTGCCCCCTCGGGCTGCGGGTTCTTaGCAGACCCTCTGCAGATCC +
Preference number: 4 (lower is better)
Translates to: VPGSEDLFPLEKLAGLPPRAAGS*QTLCRS
Trigger: GGATCTGCAGAGGGTCTGCCAAGAACCCGCAGCCCG...AGGGGGCAACCCAGCCAGCTTCTCTAATGGGAAGAGGTCTTCACTGCCAGGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR CCA 90 bp CCTCTTGAAGGCCCTCTGGTCAGCAGTCCTCTTACATTCAACAGGCGCAGCCCCCGGACCACAGACACTTaGCTGCTGACCCCAAGGGCC +
Preference number: 4 (lower is better)
Translates to: PLEGPLVSSPLTFNRRSPRTTDT*LLTPRA
Trigger: GGCCCTTGGGGTCAGCAGCCAAGTGTCTGTGGTCCG...GGGGCTGCGCCTGTTGAATGTAAGAGGACTGCTGACCAGAGGGCCTTCAAGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR CCA 90 bp GGGAGACATCCCCCGCAGGCCTTGGGGTGCTGGAACCCTGGGACGACAGTCATAGTACAAATGGGAGTCTaGCCCTGGTGCAGAAGTCCC +
Preference number: 4 (lower is better)
Translates to: GRHPPQALGCWNPGTTVIVQMGV*PWCRSP
Trigger: GGGACTTCTGCACCAGGGCCAGACTCCCATTTGTAC...TATGACTGTCGTCCCAGGGTTCCAGCACCCCAAGGCCTGCGGGGGATGTCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR CCA 90 bp TCTGGTCAGCAGTCCTCTTACATTCAACAGGCGCAGCCCCGGCTCCCCAGCCCCGGGGTGCTGGAACCCTaGGACGACAGTCATATTGTC +
Preference number: 4 (lower is better)
Translates to: SGQQSSYIQQAQPRLPSPGVLEP*DDSHIV
Trigger: GACAATATGACTGTCGTCCCAGGGTTCCAGCACCCC...GGGGCTGGGGAGCCGGGGCTGCGCCTGTTGAATGTAAGAGGACTGCTGACCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR CCA 90 bp GGGAGACTGGAGGTCTCGCATCACAGAGTCATGCAGGGGCTCCTGGTCAGTGCCCGGAGGGAGAGGCTGTaGCTGCTTTCCAGAATGGCA +
Preference number: 4 (lower is better)
Translates to: GRLEVSHHRVMQGLLVSARRERL*LLSRMA
Trigger: TGCCATTCTGGAAAGCAGCCACAGCCTCTCCCTCCG...GGCACTGACCAGGAGCCCCTGCATGACTCTGTGATGCGAGACCTCCAGTCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR CCA 90 bp TCCATCACACCAGGTCTGAGGCACAGGAGCCTCTCGGATACAGGAAACCCAGCTGGGAGGGGGTGGGCGTaGGCTCAAGGATTTGCCCTC +
Preference number: 4 (lower is better)
Translates to: SITPGLRHRSLSDTGNPAGRGWA*AQGFAL
Trigger: GAGGGCAAATCCTTGAGCCCACGCCCACCCCCTCCC...AGCTGGGTTTCCTGTATCCGAGAGGCTCCTGTGCCTCAGACCTGGTGTGATGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR CCA 90 bp CCTCCAGCAATGCCCAGCTGGAGAGAGTATGGCCATCCTCACCCCAGGGAGTCGACACACCCCGTAGGCTaGGTCAGCACAAAGGGGGAA +
Preference number: 4 (lower is better)
Translates to: PPAMPSWREYGHPHPRESTHPVG*VSTKGE
Trigger: TTCCCCCTTTGTGCTGACCCAGCCTACGGGGTGTGT...CGACTCCCTGGGGTGAGGATGGCCATACTCTCTCCAGCTGGGCATTGCTGGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR CCA 90 bp CCTCCAGCAATGCCCAGCTGGAGAGAGTATGGCCATCCTCACCCCAGGGAGTCGGAGGGAAGACTGAGCTaGGGCCTGCTGACTCCATCA +
Preference number: 4 (lower is better)
Translates to: PPAMPSWREYGHPHPRESEGRLS*GLLTPS
Trigger: TGATGGAGTCAGCAGGCCCCAGCTCAGTCTTCCCTC...CGACTCCCTGGGGTGAGGATGGCCATACTCTCTCCAGCTGGGCATTGCTGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR CCA 90 bp GGGAGACTGGAGGTCTCGCATCACAGAGTCATGCAGGGGCTCCTGGTCAGTGCCAGCCTCCTGAGTAGCTaGGATTACAGACGCGCGCCA +
Preference number: 4 (lower is better)
Translates to: GRLEVSHHRVMQGLLVSASLLSS*DYRRAP
Trigger: TGGCGCGCGTCTGTAATCCCAGCTACTCAGGAGGCT...GGCACTGACCAGGAGCCCCTGCATGACTCTGTGATGCGAGACCTCCAGTCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR TCA 90 bp GGCCCGGATTCCAGAAGGCATTGGCAGTGGGATAGCTGGCTCATCCTGTCCTCCCATTGCGCAGGCACTTaGCCTTGGGGATCCTGGTCA +
Preference number: 4 (lower is better)
Translates to: GPDSRRHWQWDSWLILSSHCAGT*PWGSWS
Trigger: TGACCAGGATCCCCAAGGTCAAGTGCCTGCGCAATG...GGAGGACAGGATGAGCCAGCTATCCCACTGCCAATGCCTTCTGGAATCCGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR TCA 90 bp CTGTTGGCCCCCACCAGAGCAGTCAGGAGTTCCTGGGGCACCACAGGGCATGGAGCTGTGTTCTGGCCCTaGGATTCTAAGCAGTTCACC +
Preference number: 4 (lower is better)
Translates to: LLAPTRAVRSSWGTTGHGAVFWP*DSKQFT
Trigger: GGTGAACTGCTTAGAATCTCAGGGCCAGAACACAGC...TCCATGCCCTGTGGTGCCCCAGGAACTCCTGACTGCTCTGGTGGGGGCCAACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR TCA 90 bp TCTGGTCAGCAGTCCTCTTACATTCAACAGGCGCAGCCCCGGCTCCCCAGCCCCGCTGTGTTCTGGCCCTaGGATTCTAAGCAGTTCACC +
Preference number: 4 (lower is better)
Translates to: SGQQSSYIQQAQPRLPSPAVFWP*DSKQFT
Trigger: GGTGAACTGCTTAGAATCTCAGGGCCAGAACACAGC...GGGGCTGGGGAGCCGGGGCTGCGCCTGTTGAATGTAAGAGGACTGCTGACCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR TCA 90 bp AAGGGGCCTGCGCTGGCAAGTCCAGAGGGGTGCACTTGGGCACGGGAGTGCTGCGCACAGTGCAATAGCTaGCCCTTCAAGAAAATCCCT +
Preference number: 4 (lower is better)
Translates to: KGPALASPEGCTWARECCAQCNS*PFKKIP
Trigger: AGGGATTTTCTTGAAGGGTCAGCTATTGCACTGTGC...GCAGCACTCCCGTGCCCAAGTGCACCCCTCTGGACTTGCCAGCGCAGGCCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR TCA 90 bp GAAACTGCTGGAGAGCCCTCCAGAGCAGGTGCTGCGGACCACAGACACTTGGCTAGGAGGCTTCCCAGATaGACAGGGGATCTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: ETAGEPSRAGAADHRHLARRLPR*TGDLRL
Trigger: CAGCCTCAGATCCCCTGTTCATCTGGGAAGCCTCCT...AGCCAAGTGTCTGTGGTCCGCAGCACCTGCTCTGGAGGGCTCTCCAGCAGTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR TCA 90 bp GAAACTGCTGGAGAGCCCTCCAGAGCAGGTGCTGCGGACCACAGACACTTGGCTCACAGCTGGGCCTCATaGCCCAAAAGACCCCTGTGT +
Preference number: 4 (lower is better)
Translates to: ETAGEPSRAGAADHRHLAHSWAS*PKRPLC
Trigger: ACACAGGGGTCTTTTGGGTCATGAGGCCCAGCTGTG...AGCCAAGTGTCTGTGGTCCGCAGCACCTGCTCTGGAGGGCTCTCCAGCAGTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448469.8
CDS-3UTR TCA 90 bp GCCGGAGGGAGAGGCTGTGGCTGCTTTCCAGAATGGCACAGCAAACTGCTGTTCCCCCAGAGGGGCAATTaGGTGGAGGCTTTGCTCGGA +
Preference number: 4 (lower is better)
Translates to: AGGRGCGCFPEWHSKLLFPQRGN*VEALLG
Trigger: TCCGAGCAAAGCCTCCACTCAATTGCCCCTCTGGGG...GAACAGCAGTTTGCTGTGCCATTCTGGAAAGCAGCCACAGCCTCTCCCTCCGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR GCA 90 bp GAAACTGCTGGAGAGCCCTCCAGAGCAGGTGCTGCGGACCACAGACACTTGGCTAGGCACTTCCCCTGCTaGTGGATGAGGTGGTCACTG +
Preference number: 4 (lower is better)
Translates to: ETAGEPSRAGAADHRHLARHFPC*WMRWSL
Trigger: CAGTGACCACCTCATCCAGCAGCAGGGGAAGTGCCT...AGCCAAGTGTCTGTGGTCCGCAGCACCTGCTCTGGAGGGCTCTCCAGCAGTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR GCA 90 bp GCAGGGTGTGGGGATAGCAGGAGCAGTTCCAAGACAAGGCCGTGGGGTAGATGTCTCCAGAGCAGGTGCTaGGGACCACAGACACTTGGC +
Preference number: 4 (lower is better)
Translates to: AGCGDSRSSSKTRPWGRCLQSRC*GPQTLG
Trigger: GCCAAGTGTCTGTGGTCCGCAGCACCTGCTCTGGAG...ACATCTACCCCACGGCCTTGTCTTGGAACTGCTCCTGCTATCCCCACACCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR GCA 90 bp GTGGCTTCAATCCAGAGCAGAGGTTCAGGCCCTTTGGGGATCAGGGACCTCTTTTGGGCACGGGAGTGCTaGCGAGAGGACGCTGGTGAG +
Preference number: 4 (lower is better)
Translates to: VASIQSRGSGPLGIRDLFWAREC*REDAGE
Trigger: CTCACCAGCGTCCTCTCGGCAGCACTCCCGTGCCCA...AAAGAGGTCCCTGATCCCCAAAGGGCCTGAACCTCTGCTCTGGATTGAAGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR GCA 90 bp TTGGCCTATGAAAGACAGGGGGCTCCTGTGGTAGGTATATCTGCCCCAGGCTGGACTTGGGCACGGGAGTaGTGCCGAGAGGACGCTGGT +
Preference number: 4 (lower is better)
Translates to: LAYERQGAPVVGISAPGWTWARE*CREDAG
Trigger: ACCAGCGTCCTCTCGGCAGCACTCCCGTGCCCAAGT...CCAGCCTGGGGCAGATATACCTACCACAGGAGCCCCCTGTCTTTCATAGGCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR GCA 90 bp GTGGCTTCAATCCAGAGCAGAGGTTCAGGCCCTTTGGGGATCAGGGACCTCTTTAGCCCCAAAGGTCCATaGCCGAGTGTGGCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: VASIQSRGSGPLGIRDLFSPKGP*PSVAQA
Trigger: GGCCTGGGCCACACTCGGGCATGGACCTTTGGGGCT...AAAGAGGTCCCTGATCCCCAAAGGGCCTGAACCTCTGCTCTGGATTGAAGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR GCA 90 bp GAGAGGACGCTGGTGAGAGTCAGGAGGCGAAACTGCTGGAGAGCCCTCCAGAGCAGAACAGGGCTGCGTTaGCACAAAGGACCGGCTGAT +
Preference number: 4 (lower is better)
Translates to: ERTLVRVRRRNCWRALQSRTGLR*HKGPAD
Trigger: ATCAGCCGGTCCTTTGTGGCAACGCAGCCCTGTTCT...GCTCTGGAGGGCTCTCCAGCAGTTTCGCCTCCTGACTCTCACCAGCGTCCTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR GCA 90 bp GTAGGCGGTGGGTGGTGGGCTGTGCTCCCTGAGAGGACGGAGGGGTGGATGGGGATTAGGCAGAGCATCTaGTACCCAATCAAGCAAAGC +
Preference number: 4 (lower is better)
Translates to: VGGGWWAVLPERTEGWMGIRQSI*YPIKQS
Trigger: GCTTTGCTTGATTGGGTAGCAGATGCTCTGCCTAAT...CCCCATCCACCCCTCCGTCCTCTCAGGGAGCACAGCCCACCACCCACCGCCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR GCA 90 bp GTGGCTTCAATCCAGAGCAGAGGTTCAGGCCCTTTGGGGATCAGGGACCTCTTTCCGCAGGCCTTGGGGTaGTGGAACCCTGGGACGACA +
Preference number: 4 (lower is better)
Translates to: VASIQSRGSGPLGIRDLFPQALG*WNPGTT
Trigger: TGTCGTCCCAGGGTTCCAGCACCCCAAGGCCTGCGG...AAAGAGGTCCCTGATCCCCAAAGGGCCTGAACCTCTGCTCTGGATTGAAGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR GCA 90 bp GAGTGCTGCCGAGAGGACGCTGGTGAGAGTCAGGAGGCGAAACTGCTGGAGAGCGGTCCCGAAGTCTCATaGAAAAGGTACAGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: ECCREDAGESQEAKLLESGPEVS*KRYRRP
Trigger: GGGCCTCCTGTACCTTTTGCATGAGACTTCGGGACC...GCTCTCCAGCAGTTTCGCCTCCTGACTCTCACCAGCGTCCTCTCGGCAGCACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448469.8
CDS-3UTR GCA 90 bp GCCCTCTGCCTTAGATGGGGCTCTTGTTCTGCAGGTCACCATAGTTCCTGCCTGTCTCCTGCCAAGGTCTaGCACCCTGAGGCATGGCCC +
Preference number: 4 (lower is better)
Translates to: ALCLRWGSCSAGHHSSCLSPAKV*HPEAWP
Trigger: GGGCCATGCCTCAGGGTGGCAGACCTTGGCAGGAGA...CAGGCAGGAACTATGGTGACCTGCAGAACAAGAGCCCCATCTAAGGCAGAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR CCA 90 bp GAGAAGCTGGCTGGGTTGCCCCCTCCTTCTGGAGGAGCACTGACTCAGACCATCGGATGGCGATGGCATTaGCGCGGATCTTCCTCATGG +
Preference number: 4 (lower is better)
Translates to: EKLAGLPPPSGGALTQTIGWRWH*RGSSSW
Trigger: CCATGAGGAAGATCCGCGCCAATGCCATCGCCATCC...GATGGTCTGAGTCAGTGCTCCTCCAGAAGGAGGGGGCAACCCAGCCAGCTTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR CCA 90 bp CAGGGCTGCGTTGCCACAAAGGACCGGCTGATAAGTGCAGAGCCTGATCTGACCAGGCTACGGTCAGGATaGCGATGGCATTGGCGCGGA +
Preference number: 4 (lower is better)
Translates to: QGCVATKDRLISAEPDLTRLRSG*RWHWRG
Trigger: TCCGCGCCAATGCCATCGCCATCCTGACCGTAGCCT...GGTCAGATCAGGCTCTGCACTTATCAGCCGGTCCTTTGTGGCAACGCAGCCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR CCA 90 bp GAAACTGCTGGAGAGCCCTCCAGAGCAGGTGCTGCGGACCACAGACACTTGGCTCAGCCTTCAGCTGCTTaGCCGACAGGTAGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: ETAGEPSRAGAADHRHLAQPSAA*PTGRPS
Trigger: AGAAGGCCTACCTGTCGGCCAAGCAGCTGAAGGCTG...AGCCAAGTGTCTGTGGTCCGCAGCACCTGCTCTGGAGGGCTCTCCAGCAGTTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR CCA 90 bp AATTGTCCTCAGATGGCTCTGGAGCCTCAGTCCAGGTCGGCTACTCAGACAGCCCCGGATGGGCCGGTCTaGGCTCAGCTTGTCACTCTC +
Preference number: 4 (lower is better)
Translates to: NCPQMALEPQSRSATQTAPDGPV*AQLVTL
Trigger: GAGAGTGACAAGCTGAGCCCAGACCGGCCCATCCGG...GGCTGTCTGAGTAGCCGACCTGGACTGAGGCTCCAGAGCCATCTGAGGACAATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR CCA 90 bp AAGGGGCCTGCGCTGGCAAGTCCAGAGGGGTGCACTTGGGCACGGGAGTGCTGCGTGTTCACTTCGCAGTaGCTATCCAGAAAGGTGAGA +
Preference number: 4 (lower is better)
Translates to: KGPALASPEGCTWARECCVFTSQ*LSRKVR
Trigger: TCTCACCTTTCTGGATAGCCACTGCGAAGTGAACAC...GCAGCACTCCCGTGCCCAAGTGCACCCCTCTGGACTTGCCAGCGCAGGCCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR CCA 90 bp GTCCAGCACCCTGACCATCTCCTCTCCCGGGGCAAGGCCAGGACAGCACTGAGGCCCCAGATGTCCATCTaGGCATCATACTTTCCCAAG +
Preference number: 4 (lower is better)
Translates to: VQHPDHLLSRGKARTALRPQMSI*ASYFPK
Trigger: CTTGGGAAAGTATGATGCCCAGATGGACATCTGGGG...CCTCAGTGCTGTCCTGGCCTTGCCCCGGGAGAGGAGATGGTCAGGGTGCTGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448469.8
CDS-3UTR CCA 90 bp TTGGCCTATGAAAGACAGGGGGCTCCTGTGGTAGGTATATCTGCCCCAGGCTGGCGGGCTGCGGGTTCTTaGCAGACCCTCTGCAGATCC +
Preference number: 4 (lower is better)
Translates to: LAYERQGAPVVGISAPGWRAAGS*QTLCRS
Trigger: GGATCTGCAGAGGGTCTGCCAAGAACCCGCAGCCCG...CCAGCCTGGGGCAGATATACCTACCACAGGAGCCCCCTGTCTTTCATAGGCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR CCA 90 bp GTGCCTGGCAGTGAAGACCTCTTCCCATTAGAGAAGCTGGCTGGGTTGCCCCCTAGGAGGCGAAACTGCTaGAGAGCCCTCCAGAGCAGG +
Preference number: 4 (lower is better)
Translates to: VPGSEDLFPLEKLAGLPPRRRNC*RALQSR
Trigger: CCTGCTCTGGAGGGCTCTCCAGCAGTTTCGCCTCCT...AGGGGGCAACCCAGCCAGCTTCTCTAATGGGAAGAGGTCTTCACTGCCAGGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR CCA 90 bp GGTCTGCTTTGTAGGGGAGACCCCCAGGGTCCTGGTACCAACAGTCATTTGCCCGTCCATGCCCGAGTGTaGCCCAGGCCTTCTAGTCCA +
Preference number: 4 (lower is better)
Translates to: GLLCRGDPQGPGTNSHLPVHARV*PRPSSP
Trigger: TGGACTAGAAGGCCTGGGCCACACTCGGGCATGGAC...GGGCAAATGACTGTTGGTACCAGGACCCTGGGGGTCTCCCCTACAAAGCAGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR CCA 90 bp GGGAGACATCCCCCGCAGGCCTTGGGGTGCTGGAACCCTGGGACGACAGTCATAACCTGTGCTGATTCCTaGTTTTGGTCCAAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: GRHPPQALGCWNPGTTVITCADS*FWSKAC
Trigger: GCAGGCCTTGGACCAAAACCAGGAATCAGCACAGGT...TATGACTGTCGTCCCAGGGTTCCAGCACCCCAAGGCCTGCGGGGGATGTCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR CCA 90 bp CCTCTTGAAGGCCCTCTGGTCAGCAGTCCTCTTACATTCAACAGGCGCAGCCCCGGGTGGATGGGGGAATaGAGGCTGCAGCCAAGGTCT +
Preference number: 4 (lower is better)
Translates to: PLEGPLVSSPLTFNRRSPGWMGE*RLQPRS
Trigger: AGACCTTGGCTGCAGCCTCCATTCCCCCATCCACCC...GGGGCTGCGCCTGTTGAATGTAAGAGGACTGCTGACCAGAGGGCCTTCAAGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR CCA 90 bp GCAGGGTGTGGGGATAGCAGGAGCAGTTCCAAGACAAGGCCGTGGGGTAGATGTGATGGAGAGTGGAAATaGGGCTCAGCGCGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: AGCGDSRSSSKTRPWGRCDGEWK*GSARQE
Trigger: CTCCTGGCGCGCTGAGCCCCATTTCCACTCTCCATC...ACATCTACCCCACGGCCTTGTCTTGGAACTGCTCCTGCTATCCCCACACCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR CCA 90 bp GTCCGCACCCCTAGTACACTCTTCTCCACGCTTCACAGGGCTGAATTAAGCAGGCACCCCATGCAGTGCTaGGAGACATCCCCCGCAGGC +
Preference number: 4 (lower is better)
Translates to: VRTPSTLFSTLHRAELSRHPMQC*ETSPAG
Trigger: GCCTGCGGGGGATGTCTCCCAGCACTGCATGGGGTG...CCTGCTTAATTCAGCCCTGTGAAGCGTGGAGAAGAGTGTACTAGGGGTGCGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR CCA 90 bp GAGTGCTGCCGAGAGGACGCTGGTGAGAGTCAGGAGGCGAAACTGCTGGAGAGCCTACCGTCATGTGTGTaGCAACAGCTGCCACTGCTG +
Preference number: 4 (lower is better)
Translates to: ECCREDAGESQEAKLLESLPSCV*QQLPLL
Trigger: CAGCAGTGGCAGCTGTTGCCACACACATGACGGTAG...GCTCTCCAGCAGTTTCGCCTCCTGACTCTCACCAGCGTCCTCTCGGCAGCACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448469.8
CDS-3UTR CCA 90 bp CGCTGGCAAGTCCAGAGGGGTGCACTTGGGCACGGGAGTGCTGCCGAGAGGACGTCTCAGCCTGACACATaGCCAAATAGAAGTGGAGTC +
Preference number: 4 (lower is better)
Translates to: RWQVQRGALGHGSAAERTSQPDT*PNRSGV
Trigger: GACTCCACTTCTATTTGGCCATGTGTCAGGCTGAGA...CGTCCTCTCGGCAGCACTCCCGTGCCCAAGTGCACCCCTCTGGACTTGCCAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448469.8
CDS-3UTR CCA 90 bp GCCCTCTGCCTTAGATGGGGCTCTTGTTCTGCAGGTCACCATAGTTCCTGCCTGTGCTGGAGCAGCCTCTaGGCCTTGGGTCCCATTCCC +
Preference number: 4 (lower is better)
Translates to: ALCLRWGSCSAGHHSSCLCWSSL*ALGPIP
Trigger: GGGAATGGGACCCAAGGCCCAGAGGCTGCTCCAGCA...CAGGCAGGAACTATGGTGACCTGCAGAACAAGAGCCCCATCTAAGGCAGAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR CCA 90 bp GCTCAAGGATTTGCCCTCAGAGAGGTGGGTGCTCTAGGTGCAGGAGACACTGCAGAGCAGGGGAAGTGCTaGAGCAGCCTCTGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: AQGFALREVGALGAGDTAEQGKC*SSLWAL
Trigger: CAAGGCCCAGAGGCTGCTCCAGCACTTCCCCTGCTC...TGCAGTGTCTCCTGCACCTAGAGCACCCACCTCTCTGAGGGCAAATCCTTGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR CAA 72 bp CGGGGCGTGCCCGCCTGCGCCCTCCTAGAACAAGCTTaGGAGAACGTGTGTCATGGTGGGTATTTGCTGATG +
Preference number: 4 (lower is better)
Translates to: RGVPACALLEQA*ENVCHGGYLLM
Trigger: CATCAGCAAATACCCACCATGACACACGTTCTCCAAAGCTTGTTCTAGGAGGGCGCAGGCGGGCACGCCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448469.8
CDS-3UTR TCA 90 bp CCTCTTGAAGGCCCTCTGGTCAGCAGTCCTCTTACATTCAACAGGCGCAGCCCCCACTCTCCAGCTGGTTaGAGGCGTGCTGTCTGTAGG +
Preference number: 4 (lower is better)
Translates to: PLEGPLVSSPLTFNRRSPHSPAG*RRAVCR
Trigger: CCTACAGACAGCACGCCTTCAACCAGCTGGAGAGTG...GGGGCTGCGCCTGTTGAATGTAAGAGGACTGCTGACCAGAGGGCCTTCAAGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR TCA 90 bp CAGGGCTGCGTTGCCACAAAGGACCGGCTGATAAGTGCAGAGCCTGATCTGACCTGCACATCTGCAGTATaGCTGGGGATCCAGGGGAGG +
Preference number: 4 (lower is better)
Translates to: QGCVATKDRLISAEPDLTCTSAV*LGIQGR
Trigger: CCTCCCCTGGATCCCCAGTCATACTGCAGATGTGCA...GGTCAGATCAGGCTCTGCACTTATCAGCCGGTCCTTTGTGGCAACGCAGCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR TCA 90 bp CAGGTGCTGCGGACCACAGACACTTGGCTGCTGACCCCAAGGGCCGTGTGGAGGGCACAGTGCAATAGCTaGCCCTTCAAGAAAATCCCT +
Preference number: 4 (lower is better)
Translates to: QVLRTTDTWLLTPRAVWRAQCNS*PFKKIP
Trigger: AGGGATTTTCTTGAAGGGTCAGCTATTGCACTGTGC...CCTCCACACGGCCCTTGGGGTCAGCAGCCAAGTGTCTGTGGTCCGCAGCACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR TCA 90 bp TCTGGTCAGCAGTCCTCTTACATTCAACAGGCGCAGCCCCGGCTCCCCAGCCCCTGTTCTCAGCGGCTGTaGAAAGGAACTGGGAGTTCT +
Preference number: 4 (lower is better)
Translates to: SGQQSSYIQQAQPRLPSPCSQRL*KGTGSS
Trigger: AGAACTCCCAGTTCCTTTTCACAGCCGCTGAGAACA...GGGGCTGGGGAGCCGGGGCTGCGCCTGTTGAATGTAAGAGGACTGCTGACCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR TCA 90 bp TTGGCCTATGAAAGACAGGGGGCTCCTGTGGTAGGTATATCTGCCCCAGGCTGGCAGGCGATGGCAGTTTaGGCACGCCAGGGAGGAAGA +
Preference number: 4 (lower is better)
Translates to: LAYERQGAPVVGISAPGWQAMAV*ARQGGR
Trigger: TCTTCCTCCCTGGCGTGCTCAAACTGCCATCGCCTG...CCAGCCTGGGGCAGATATACCTACCACAGGAGCCCCCTGTCTTTCATAGGCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR TCA 90 bp GAACAGCTCCCTGCTGTACAAATGGGAGTCTGGCCCTGGTGCAGAAGTCCCTTCCCGAGAGGACGCTGGTaGGAGTCAGGAGGCGAAACT +
Preference number: 4 (lower is better)
Translates to: EQLPAVQMGVWPWCRSPFPRGRW*ESGGET
Trigger: AGTTTCGCCTCCTGACTCTCACCAGCGTCCTCTCGG...GAAGGGACTTCTGCACCAGGGCCAGACTCCCATTTGTACAGCAGGGAGCTGTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR TCA 90 bp CAGACAGTGGCTTCAATCCAGAGCAGAGGTTCAGGCCCTTTGGGGATCAGGGACCCGAGAGGACGCTGGTaGGAGTCAGGAGGCGAAACT +
Preference number: 4 (lower is better)
Translates to: QTVASIQSRGSGPLGIRDPRGRW*ESGGET
Trigger: AGTTTCGCCTCCTGACTCTCACCAGCGTCCTCTCGG...GTCCCTGATCCCCAAAGGGCCTGAACCTCTGCTCTGGATTGAAGCCACTGTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR TCA 90 bp GCAGGGTGTGGGGATAGCAGGAGCAGTTCCAAGACAAGGCCGTGGGGTAGATGTAGGAGGCTTCCCAGATaGACAGGGGATCTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: AGCGDSRSSSKTRPWGRCRRLPR*TGDLRL
Trigger: CAGCCTCAGATCCCCTGTTCATCTGGGAAGCCTCCT...ACATCTACCCCACGGCCTTGTCTTGGAACTGCTCCTGCTATCCCCACACCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR TCA 90 bp CAATCTCAGGGCTTCTTGACTCTCCAGGCCACTCAATTCTGGGCTTGTCTGAGACAAGGTCTGCCACCCTaGGGCATGGCCCCTCGGGCT +
Preference number: 4 (lower is better)
Translates to: QSQGFLTLQATQFWACLRQGLPP*GMAPRA
Trigger: AGCCCGAGGGGCCATGCCTCAGGGTGGCAGACCTTG...TCTCAGACAAGCCCAGAATTGAGTGGCCTGGAGAGTCAAGAAGCCCTGAGATTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR GCA 90 bp CAGACAGTGGCTTCAATCCAGAGCAGAGGTTCAGGCCCTTTGGGGATCAGGGACTCGCTCGCGCCTAGCTaGTCAGTCCTGCAGAGCAGA +
Preference number: 4 (lower is better)
Translates to: QTVASIQSRGSGPLGIRDSLAPS*SVLQSR
Trigger: TCTGCTCTGCAGGACTGAGCAGCTAGGCGCGAGCGA...GTCCCTGATCCCCAAAGGGCCTGAACCTCTGCTCTGGATTGAAGCCACTGTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR GCA 90 bp GAAACTGCTGGAGAGCCCTCCAGAGCAGGTGCTGCGGACCACAGACACTTGGCTGTCCGGGTCATCTTCTaGTCAAGAGGGATCTGCTCC +
Preference number: 4 (lower is better)
Translates to: ETAGEPSRAGAADHRHLAVRVIF*SRGICS
Trigger: GGAGCAGATCCCTCTTGAGCAGAAGATGACCCGGAC...AGCCAAGTGTCTGTGGTCCGCAGCACCTGCTCTGGAGGGCTCTCCAGCAGTTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR GCA 90 bp CCTGGCTGCGGAAGAAACATCACGACAGAGGACAGGCAAAGCATGGCCCTGGGAAATGATGCCGGGGAGTaGTTCCTTCACGGGGACCGT +
Preference number: 4 (lower is better)
Translates to: PGCGRNITTEDRQSMALGNDAGE*FLHGDR
Trigger: ACGGTCCCCGTGAAGGAAGCACTCCCCGGCATCATT...TCCCAGGGCCATGCTTTGCCTGTCCTCTGTCGTGATGTTTCTTCCGCAGCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR GCA 90 bp GCCGGAGGGAGAGGCTGTGGCTGCTTTCCAGAATGGCACAGCAAACTGCTGTTCAGGCACTTCCCCTGCTaGTGGATGAGGTGGTCACTG +
Preference number: 4 (lower is better)
Translates to: AGGRGCGCFPEWHSKLLFRHFPC*WMRWSL
Trigger: CAGTGACCACCTCATCCAGCAGCAGGGGAAGTGCCT...GAACAGCAGTTTGCTGTGCCATTCTGGAAAGCAGCCACAGCCTCTCCCTCCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR GCA 90 bp CAGACAGTGGCTTCAATCCAGAGCAGAGGTTCAGGCCCTTTGGGGATCAGGGACGTCAGGAGGCGAAACTaGTGGAGAGCCCTCCAGAGC +
Preference number: 4 (lower is better)
Translates to: QTVASIQSRGSGPLGIRDVRRRN*WRALQS
Trigger: GCTCTGGAGGGCTCTCCAGCAGTTTCGCCTCCTGAC...GTCCCTGATCCCCAAAGGGCCTGAACCTCTGCTCTGGATTGAAGCCACTGTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR GCA 90 bp GAAGGGGCCTGCGCTGGCAAGTCCAGAGGGGTGCACTTGGGCACGGGAGTGCTGAAGGGCCAGATGCTTTaGGATCAGGCTTCACAAAAA +
Preference number: 4 (lower is better)
Translates to: EGACAGKSRGVHLGTGVLKGQML*DQASQK
Trigger: TTTTTGTGAAGCCTGATCGCAAAGCATCTGGCCCTT...CAGCACTCCCGTGCCCAAGTGCACCCCTCTGGACTTGCCAGCGCAGGCCCCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR GCA 90 bp CCTGGCTGCGGAAGAAACATCACGACAGAGGACAGGCAAAGCATGGCCCTGGGACAGCCTCTCCATCCATaGTGCCCAATTTCCCCTGGC +
Preference number: 4 (lower is better)
Translates to: PGCGRNITTEDRQSMALGQPLHP*CPISPG
Trigger: GCCAGGGGAAATTGGGCAGCATGGATGGAGAGGCTG...TCCCAGGGCCATGCTTTGCCTGTCCTCTGTCGTGATGTTTCTTCCGCAGCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448469.8
CDS-3UTR GCA 90 bp CCTCCAGCAATGCCCAGCTGGAGAGAGTATGGCCATCCTCACCCCAGGGAGTCGAAGACAAGTGGTCCCTaGCTTCATGGAGCTCACAGC +
Preference number: 4 (lower is better)
Translates to: PPAMPSWREYGHPHPRESKTSGP*LHGAHS
Trigger: GCTGTGAGCTCCATGAAGGCAGGGACCACTTGTCTT...CGACTCCCTGGGGTGAGGATGGCCATACTCTCTCCAGCTGGGCATTGCTGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR CCA 90 bp GCCCTCTGCCTTAGATGGGGCTCTTGTTCTGCAGGTCACCATAGTTCCTGCCTGAGGCTACGGTCAGGATaGCGATGGCATTGGCGCGGA +
Preference number: 4 (lower is better)
Translates to: ALCLRWGSCSAGHHSSCLRLRSG*RWHWRG
Trigger: TCCGCGCCAATGCCATCGCCATCCTGACCGTAGCCT...CAGGCAGGAACTATGGTGACCTGCAGAACAAGAGCCCCATCTAAGGCAGAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR CCA 90 bp CCTGGCTGCGGAAGAAACATCACGACAGAGGACAGGCAAAGCATGGCCCTGGGAGGGGACCGTGAGCTCTaGGTAGACGTTCTCCAGGTA +
Preference number: 4 (lower is better)
Translates to: PGCGRNITTEDRQSMALGGDREL*VDVLQV
Trigger: TACCTGGAGAACGTCTACCCAGAGCTCACGGTCCCC...TCCCAGGGCCATGCTTTGCCTGTCCTCTGTCGTGATGTTTCTTCCGCAGCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR CCA 90 bp GGAGGGCAGCTCCGAGGGGACAGGCCTGGCTCACAGGGAAGGAGAGAGGGCTGGCCAATCAAGCAAAGCTaGTCTGGTAAGACTCTTTTC +
Preference number: 4 (lower is better)
Translates to: GGQLRGDRPGSQGRREGWPIKQS*SGKTLF
Trigger: GAAAAGAGTCTTACCAGACCAGCTTTGCTTGATTGG...CCAGCCCTCTCTCCTTCCCTGTGAGCCAGGCCTGTCCCCTCGGAGCTGCCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR CCA 90 bp GGGAGACATCCCCCGCAGGCCTTGGGGTGCTGGAACCCTGGGACGACAGTCATAAGGGGTCAGAAGTTCTaGGTAACTCCAGATCAGCAG +
Preference number: 4 (lower is better)
Translates to: GRHPPQALGCWNPGTTVIRGQKF*VTPDQQ
Trigger: CTGCTGATCTGGAGTTACCCAGAACTTCTGACCCCT...TATGACTGTCGTCCCAGGGTTCCAGCACCCCAAGGCCTGCGGGGGATGTCTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR CCA 90 bp GGCTCTTGCTTTTCTGTAGTTTGCAGAAGTTCCTGTCCAGATCAGAGGAGGAGGTGCCACCCTGAGGCATaGCCCCTCGGGCTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: GSCFSVVCRSSCPDQRRRCHPEA*PLGLLG
Trigger: GCCCAGCAGCCCGAGGGGCCATGCCTCAGGGTGGCA...CCTCCTCCTCTGATCTGGACAGGAACTTCTGCAAACTACAGAAAAGCAAGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR CCA 90 bp CACCCCCTAGTGGGAAGCTGCCTTCTTTGTAGGGATGAAGTGTGGGGCCAGCAGGTCCAGCAAGTGGGCTaGGCACACAGATCCCTCAGA +
Preference number: 4 (lower is better)
Translates to: HPLVGSCLLCRDEVWGQQVQQVG*AHRSLR
Trigger: TCTGAGGGATCTGTGTGCCCAGCCCACTTGCTGGAC...CTGCTGGCCCCACACTTCATCCCTACAAAGAAGGCAGCTTCCCACTAGGGGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR CCA 90 bp GCTCAAGGATTTGCCCTCAGAGAGGTGGGTGCTCTAGGTGCAGGAGACACTGCACTCATCCTGTCCTCCTaGGAGAAGAGGGGCACAGGC +
Preference number: 4 (lower is better)
Translates to: AQGFALREVGALGAGDTALILSS*EKRGTG
Trigger: GCCTGTGCCCCTCTTCTCCCAGGAGGACAGGATGAG...TGCAGTGTCTCCTGCACCTAGAGCACCCACCTCTCTGAGGGCAAATCCTTGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR CCA 90 bp GCCGGAGGGAGAGGCTGTGGCTGCTTTCCAGAATGGCACAGCAAACTGCTGTTCCAGCTGGAGAGAGTATaGCCATCCTCACCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: AGGRGCGCFPEWHSKLLFQLERV*PSSPQG
Trigger: TCCCTGGGGTGAGGATGGCCATACTCTCTCCAGCTG...GAACAGCAGTTTGCTGTGCCATTCTGGAAAGCAGCCACAGCCTCTCCCTCCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR CCA 90 bp CACCCCCTAGTGGGAAGCTGCCTTCTTTGTAGGGATGAAGTGTGGGGCCAGCAGGTGCTTGTGACCATGTaGAGGAAGCCCAGAGGGCTC +
Preference number: 4 (lower is better)
Translates to: HPLVGSCLLCRDEVWGQQVLVTM*RKPRGL
Trigger: GAGCCCTCTGGGCTTCCTCCACATGGTCACAAGCAC...CTGCTGGCCCCACACTTCATCCCTACAAAGAAGGCAGCTTCCCACTAGGGGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR CCA 90 bp CCTCCAGCAATGCCCAGCTGGAGAGAGTATGGCCATCCTCACCCCAGGGAGTCGCATTACGGAAGTGCCTaGGTGGAGGATGGAGTGTTG +
Preference number: 4 (lower is better)
Translates to: PPAMPSWREYGHPHPRESHYGSA*VEDGVL
Trigger: CAACACTCCATCCTCCACCCAGGCACTTCCGTAATG...CGACTCCCTGGGGTGAGGATGGCCATACTCTCTCCAGCTGGGCATTGCTGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR TCA 90 bp GCTCAAGGATTTGCCCTCAGAGAGGTGGGTGCTCTAGGTGCAGGAGACACTGCAGAGTTCCTGTCACAATaGGCGGGATGGTGCGGTCCT +
Preference number: 4 (lower is better)
Translates to: AQGFALREVGALGAGDTAEFLSQ*AGWCGP
Trigger: AGGACCGCACCATCCCGCTCATTGTGACAGGAACTC...TGCAGTGTCTCCTGCACCTAGAGCACCCACCTCTCTGAGGGCAAATCCTTGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR TCA 90 bp GGTCTGCTTTGTAGGGGAGACCCCCAGGGTCCTGGTACCAACAGTCATTTGCCCAGATTCCTCCAGCTATaGCAGGCGTCCTTATGGGCC +
Preference number: 4 (lower is better)
Translates to: GLLCRGDPQGPGTNSHLPRFLQL*QASLWA
Trigger: GGCCCATAAGGACGCCTGTCATAGCTGGAGGAATCT...GGGCAAATGACTGTTGGTACCAGGACCCTGGGGGTCTCCCCTACAAAGCAGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR TCA 90 bp CAATCTCAGGGCTTCTTGACTCTCCAGGCCACTCAATTCTGGGCTTGTCTGAGAAGGGGTGCCGTTTCCTaGAGACATGGCCCACCCGGC +
Preference number: 4 (lower is better)
Translates to: QSQGFLTLQATQFWACLRRGAVS*RHGPPG
Trigger: GCCGGGTGGGCCATGTCTTCAGGAAACGGCACCCCT...TCTCAGACAAGCCCAGAATTGAGTGGCCTGGAGAGTCAAGAAGCCCTGAGATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR TCA 90 bp GCTCAAGGATTTGCCCTCAGAGAGGTGGGTGCTCTAGGTGCAGGAGACACTGCATGCACATCTGCAGTATaGCTGGGGATCCAGGGGAGG +
Preference number: 4 (lower is better)
Translates to: AQGFALREVGALGAGDTACTSAV*LGIQGR
Trigger: CCTCCCCTGGATCCCCAGTCATACTGCAGATGTGCA...TGCAGTGTCTCCTGCACCTAGAGCACCCACCTCTCTGAGGGCAAATCCTTGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR TCA 90 bp GAGTGCTGCCGAGAGGACGCTGGTGAGAGTCAGGAGGCGAAACTGCTGGAGAGCGATAAGTGCAGAGCCTaGTCTGACCACAGCAAAGGA +
Preference number: 4 (lower is better)
Translates to: ECCREDAGESQEAKLLESDKCRA*SDHSKG
Trigger: TCCTTTGCTGTGGTCAGATCAGGCTCTGCACTTATC...GCTCTCCAGCAGTTTCGCCTCCTGACTCTCACCAGCGTCCTCTCGGCAGCACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR TCA 90 bp GCAGGGTGTGGGGATAGCAGGAGCAGTTCCAAGACAAGGCCGTGGGGTAGATGTCAAGAGGAGAGAGCCTaGCTCAGGAGAAGCAAGCAC +
Preference number: 4 (lower is better)
Translates to: AGCGDSRSSSKTRPWGRCQEERA*LRRSKH
Trigger: GTGCTTGCTTCTCCTGAGTCAGGCTCTCTCCTCTTG...ACATCTACCCCACGGCCTTGTCTTGGAACTGCTCCTGCTATCCCCACACCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR TCA 90 bp GTCCAGCACCCTGACCATCTCCTCTCCCGGGGCAAGGCCAGGACAGCACTGAGGCCCATGATGCTGTATTaGCAGAGGCAAAAACCTTTG +
Preference number: 4 (lower is better)
Translates to: VQHPDHLLSRGKARTALRPMMLY*QRQKPL
Trigger: CAAAGGTTTTTGCCTCTGTCAATACAGCATCATGGG...CCTCAGTGCTGTCCTGGCCTTGCCCCGGGAGAGGAGATGGTCAGGGTGCTGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448469.8
CDS-3UTR GCA 90 bp CACCTGTTGGCCCCCACCAGAGCAGTCAGGAGTTCCTGGGGCACCACAGGGCATTTCATCTTCTTCCTCTaGTCTATCCGCGTAGCCACA +
Preference number: 4 (lower is better)
Translates to: HLLAPTRAVRSSWGTTGHFIFFL*SIRVAT
Trigger: TGTGGCTACGCGGATAGAGCAGAGGAAGAAGATGAA...ATGCCCTGTGGTGCCCCAGGAACTCCTGACTGCTCTGGTGGGGGCCAACAGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR GCA 90 bp TCTGGTCAGCAGTCCTCTTACATTCAACAGGCGCAGCCCCGGCTCCCCAGCCCCTTCATCTTCTTCCTCTaGTCTATCCGCGTAGCCACA +
Preference number: 4 (lower is better)
Translates to: SGQQSSYIQQAQPRLPSPFIFFL*SIRVAT
Trigger: TGTGGCTACGCGGATAGAGCAGAGGAAGAAGATGAA...GGGGCTGGGGAGCCGGGGCTGCGCCTGTTGAATGTAAGAGGACTGCTGACCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR GCA 90 bp GAAACTGCTGGAGAGCCCTCCAGAGCAGGTGCTGCGGACCACAGACACTTGGCTTCTTGGCAGACCCTCTaGAGATCCCCATTCCAAGCA +
Preference number: 4 (lower is better)
Translates to: ETAGEPSRAGAADHRHLASWQTL*RSPFQA
Trigger: TGCTTGGAATGGGGATCTGCAGAGGGTCTGCCAAGA...AGCCAAGTGTCTGTGGTCCGCAGCACCTGCTCTGGAGGGCTCTCCAGCAGTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR GCA 90 bp GTGGCTTCAATCCAGAGCAGAGGTTCAGGCCCTTTGGGGATCAGGGACCTCTTTGCCCTCCAGAGCAGGTaGTGCGGACCACAGACACTT +
Preference number: 4 (lower is better)
Translates to: VASIQSRGSGPLGIRDLFALQSR*CGPQTL
Trigger: AAGTGTCTGTGGTCCGCAGCACCTGCTCTGGAGGGC...AAAGAGGTCCCTGATCCCCAAAGGGCCTGAACCTCTGCTCTGGATTGAAGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR GCA 90 bp GGTCTGCTTTGTAGGGGAGACCCCCAGGGTCCTGGTACCAACAGTCATTTGCCCGAGCAAGCTACCAGGTaGAGGACAGGGCTAGACTTG +
Preference number: 4 (lower is better)
Translates to: GLLCRGDPQGPGTNSHLPEQATR*RTGLDL
Trigger: CAAGTCTAGCCCTGTCCTGCACCTGGTAGCTTGCTC...GGGCAAATGACTGTTGGTACCAGGACCCTGGGGGTCTCCCCTACAAAGCAGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR GCA 90 bp CCTGGCTGCGGAAGAAACATCACGACAGAGGACAGGCAAAGCATGGCCCTGGGATGCAGAAGTCCCTTCTaGTGCCCTGCCCATAGGCTT +
Preference number: 4 (lower is better)
Translates to: PGCGRNITTEDRQSMALGCRSPF*CPAHRL
Trigger: AAGCCTATGGGCAGGGCAGCAGAAGGGACTTCTGCA...TCCCAGGGCCATGCTTTGCCTGTCCTCTGTCGTGATGTTTCTTCCGCAGCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR GCA 90 bp GGGAGACATCCCCCGCAGGCCTTGGGGTGCTGGAACCCTGGGACGACAGTCATAGTTATTTCTCCCAACTaGAGATGGAGACAGCCTTCC +
Preference number: 4 (lower is better)
Translates to: GRHPPQALGCWNPGTTVIVISPN*RWRQPS
Trigger: GGAAGGCTGTCTCCATCTGCAGTTGGGAGAAATAAC...TATGACTGTCGTCCCAGGGTTCCAGCACCCCAAGGCCTGCGGGGGATGTCTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR GCA 90 bp GCAGGGTGTGGGGATAGCAGGAGCAGTTCCAAGACAAGGCCGTGGGGTAGATGTGTGGGCTTCTGTCCTTaGTTTCTCCGGGCAACAAGG +
Preference number: 4 (lower is better)
Translates to: AGCGDSRSSSKTRPWGRCVGFCP*FLRATR
Trigger: CCTTGTTGCCCGGAGAAAGCAAGGACAGAAGCCCAC...ACATCTACCCCACGGCCTTGTCTTGGAACTGCTCCTGCTATCCCCACACCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448469.8
CDS-3UTR GCA 90 bp GTCCAGCACCCTGACCATCTCCTCTCCCGGGGCAAGGCCAGGACAGCACTGAGGAAATTACCCATCCTTTaGTGCCAAGACACCATCCGT +
Preference number: 4 (lower is better)
Translates to: VQHPDHLLSRGKARTALRKLPIL*CQDTIR
Trigger: ACGGATGGTGTCTTGGCAGCAAAGGATGGGTAATTT...CCTCAGTGCTGTCCTGGCCTTGCCCCGGGAGAGGAGATGGTCAGGGTGCTGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448469.8
CDS-3UTR GCA 90 bp TCCATCACACCAGGTCTGAGGCACAGGAGCCTCTCGGATACAGGAAACCCAGCTCCTCAGAGAGGTGGGTaGTCTAGGTGCAGGAGACAC +
Preference number: 4 (lower is better)
Translates to: SITPGLRHRSLSDTGNPAPQRGG*SRCRRH
Trigger: GTGTCTCCTGCACCTAGAGCACCCACCTCTCTGAGG...AGCTGGGTTTCCTGTATCCGAGAGGCTCCTGTGCCTCAGACCTGGTGTGATGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR CCA 90 bp CAGGGCTGCGTTGCCACAAAGGACCGGCTGATAAGTGCAGAGCCTGATCTGACCGGAGTAGGACACAGATaGGCAGCTGTAATGGCGGGT +
Preference number: 4 (lower is better)
Translates to: QGCVATKDRLISAEPDLTGVGHR*AAVMAG
Trigger: ACCCGCCATTACAGCTGCCCATCTGTGTCCTACTCC...GGTCAGATCAGGCTCTGCACTTATCAGCCGGTCCTTTGTGGCAACGCAGCCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR CCA 90 bp CTGCAGGTCACCATAGTTCCTGCCTGGTCCCGACTTTTCTCCTATTGGGGTTTTTCACCCGCTGCAGCATaGGCGGCAGCCACTCGGTGT +
Preference number: 4 (lower is better)
Translates to: LQVTIVPAWSRLFSYWGFSPAAA*AAATRC
Trigger: ACACCGAGTGGCTGCCGCCCATGCTGCAGCGGGTGA...AAAACCCCAATAGGAGAAAAGTCGGGACCAGGCAGGAACTATGGTGACCTGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR CCA 90 bp AAGGGGCCTGCGCTGGCAAGTCCAGAGGGGTGCACTTGGGCACGGGAGTGCTGCTCATACTTTCCCAAGTaGTTAAACCAGGACTTGTCG +
Preference number: 4 (lower is better)
Translates to: KGPALASPEGCTWARECCSYFPK*LNQDLS
Trigger: CGACAAGTCCTGGTTTAACCACTTGGGAAAGTATGA...GCAGCACTCCCGTGCCCAAGTGCACCCCTCTGGACTTGCCAGCGCAGGCCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR CCA 90 bp GAAACTGCTGGAGAGCCCTCCAGAGCAGGTGCTGCGGACCACAGACACTTGGCTCATCTGCAGTATGACTaGGGATCCAGGGGAGGACAT +
Preference number: 4 (lower is better)
Translates to: ETAGEPSRAGAADHRHLAHLQYD*GSRGGH
Trigger: ATGTCCTCCCCTGGATCCCCAGTCATACTGCAGATG...AGCCAAGTGTCTGTGGTCCGCAGCACCTGCTCTGGAGGGCTCTCCAGCAGTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR CCA 90 bp AAGGGGCCTGCGCTGGCAAGTCCAGAGGGGTGCACTTGGGCACGGGAGTGCTGCGCTGTGAAAAGGAACTaGGAGTTCTCTTCACAAACA +
Preference number: 4 (lower is better)
Translates to: KGPALASPEGCTWARECCAVKRN*EFSSQT
Trigger: TGTTTGTGAAGAGAACTCCCAGTTCCTTTTCACAGC...GCAGCACTCCCGTGCCCAAGTGCACCCCTCTGGACTTGCCAGCGCAGGCCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR CCA 90 bp CAGGGCTGCGTTGCCACAAAGGACCGGCTGATAAGTGCAGAGCCTGATCTGACCTTTCCTGTTCCCTGGTaGGAGAAGGACCACACCCCA +
Preference number: 4 (lower is better)
Translates to: QGCVATKDRLISAEPDLTFPVPW*EKDHTP
Trigger: TGGGGTGTGGTCCTTCTCCCACCAGGGAACAGGAAA...GGTCAGATCAGGCTCTGCACTTATCAGCCGGTCCTTTGTGGCAACGCAGCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR CCA 90 bp GCCCTCTGCCTTAGATGGGGCTCTTGTTCTGCAGGTCACCATAGTTCCTGCCTGTGGCAGTGGGATAGCTaGCTCATCCTGTCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: ALCLRWGSCSAGHHSSCLWQWDS*LILSSW
Trigger: CCAGGAGGACAGGATGAGCCAGCTATCCCACTGCCA...CAGGCAGGAACTATGGTGACCTGCAGAACAAGAGCCCCATCTAAGGCAGAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR CCA 90 bp GCCGGAGGGAGAGGCTGTGGCTGCTTTCCAGAATGGCACAGCAAACTGCTGTTCACGGAAGTGCCTGGGTaGAGGATGGAGTGTTGCTTG +
Preference number: 4 (lower is better)
Translates to: AGGRGCGCFPEWHSKLLFTEVPG*RMECCL
Trigger: CAAGCAACACTCCATCCTCCACCCAGGCACTTCCGT...GAACAGCAGTTTGCTGTGCCATTCTGGAAAGCAGCCACAGCCTCTCCCTCCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR TCA 90 bp AATTGTCCTCAGATGGCTCTGGAGCCTCAGTCCAGGTCGGCTACTCAGACAGCCGGTAGGTTCAGCTTCTaGTCACAGACATGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: NCPQMALEPQSRSATQTAGRFSF*SQTWWG
Trigger: CCCCCACCATGTCTGTGATCAGAAGCTGAACCTACC...GGCTGTCTGAGTAGCCGACCTGGACTGAGGCTCCAGAGCCATCTGAGGACAATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR TCA 90 bp GAGTGCTGCCGAGAGGACGCTGGTGAGAGTCAGGAGGCGAAACTGCTGGAGAGCCAAGGTCTTTTACAGTaGCTTGCTCCTAAGCCCAGA +
Preference number: 4 (lower is better)
Translates to: ECCREDAGESQEAKLLESQGLLQ*LAPKPR
Trigger: TCTGGGCTTAGGAGCAAGTCACTGTAAAAGACCTTG...GCTCTCCAGCAGTTTCGCCTCCTGACTCTCACCAGCGTCCTCTCGGCAGCACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR TCA 90 bp TCCATCACACCAGGTCTGAGGCACAGGAGCCTCTCGGATACAGGAAACCCAGCTATCAGTTGCTGGGGCTaGGGATTTGCCCTCTGCCTT +
Preference number: 4 (lower is better)
Translates to: SITPGLRHRSLSDTGNPAISCWG*GFALCL
Trigger: AAGGCAGAGGGCAAATCCTCAGCCCCAGCAACTGAT...AGCTGGGTTTCCTGTATCCGAGAGGCTCCTGTGCCTCAGACCTGGTGTGATGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR GCA 90 bp GTTCATCCTTGTGGCCAACATGATCTGTACATTCTCTGGCACAAGGTAGGCACCGGTGAGAACGGTAGCTaGAGCCACGTCCGCCCCACG +
Preference number: 4 (lower is better)
Translates to: VHPCGQHDLYILWHKVGTGENGS*SHVRPT
Trigger: CGTGGGGCGGACGTGGCTGCAGCTACCGTTCTCACC...GGTGCCTACCTTGTGCCAGAGAATGTACAGATCATGTTGGCCACAAGGATGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR GCA 90 bp TCCATCACACCAGGTCTGAGGCACAGGAGCCTCTCGGATACAGGAAACCCAGCTGTCCGGGTCATCTTCTaGTCAAGAGGGATCTGCTCC +
Preference number: 4 (lower is better)
Translates to: SITPGLRHRSLSDTGNPAVRVIF*SRGICS
Trigger: GGAGCAGATCCCTCTTGAGCAGAAGATGACCCGGAC...AGCTGGGTTTCCTGTATCCGAGAGGCTCCTGTGCCTCAGACCTGGTGTGATGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR GCA 90 bp CCTCCAGCAATGCCCAGCTGGAGAGAGTATGGCCATCCTCACCCCAGGGAGTCGTTCATCTTCTTCCTCTaGTCTATCCGCGTAGCCACA +
Preference number: 4 (lower is better)
Translates to: PPAMPSWREYGHPHPRESFIFFL*SIRVAT
Trigger: TGTGGCTACGCGGATAGAGCAGAGGAAGAAGATGAA...CGACTCCCTGGGGTGAGGATGGCCATACTCTCTCCAGCTGGGCATTGCTGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR GCA 90 bp GCAGGGTGTGGGGATAGCAGGAGCAGTTCCAAGACAAGGCCGTGGGGTAGATGTAAGCAGTTCACCCCCTaGTTAATGATGCCGGGGAGT +
Preference number: 4 (lower is better)
Translates to: AGCGDSRSSSKTRPWGRCKQFTP*LMMPGS
Trigger: ACTCCCCGGCATCATTAAGCAGGGGGTGAACTGCTT...ACATCTACCCCACGGCCTTGTCTTGGAACTGCTCCTGCTATCCCCACACCCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR GCA 90 bp CCTGGCTGCGGAAGAAACATCACGACAGAGGACAGGCAAAGCATGGCCCTGGGATCTTGGCAGACCCTCTaGAGATCCCCATTCCAAGCA +
Preference number: 4 (lower is better)
Translates to: PGCGRNITTEDRQSMALGSWQTL*RSPFQA
Trigger: TGCTTGGAATGGGGATCTGCAGAGGGTCTGCCAAGA...TCCCAGGGCCATGCTTTGCCTGTCCTCTGTCGTGATGTTTCTTCCGCAGCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR GCA 90 bp AATGCCCGAGAGAGAGGTCTCAGCCTGACACATGGCCAAATAGAAGTGGAGTCTTGCCCCAGGCTGGTCTaGTTTGTAGGGGAGACCCCC +
Preference number: 4 (lower is better)
Translates to: NARERGLSLTHGQIEVESCPRLV*FVGETP
Trigger: GGGGGTCTCCCCTACAAAGCAGACCAGCCTGGGGCA...AGACTCCACTTCTATTTGGCCATGTGTCAGGCTGAGACCTCTCTCTCGGGCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448469.8
CDS-3UTR GCA 90 bp GAGTGCTGCCGAGAGGACGCTGGTGAGAGTCAGGAGGCGAAACTGCTGGAGAGCAAAGGAAGGCGCTGGTaGATGTGGACATGTAAGAAG +
Preference number: 4 (lower is better)
Translates to: ECCREDAGESQEAKLLESKGRRW*MWTCKK
Trigger: CTTCTTACATGTCCACATGCACCAGCGCCTTCCTTT...GCTCTCCAGCAGTTTCGCCTCCTGACTCTCACCAGCGTCCTCTCGGCAGCACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR GCA 90 bp CCTGGCTGCGGAAGAAACATCACGACAGAGGACAGGCAAAGCATGGCCCTGGGAAGTAAGTGGAGATCATaGCACTGCTCTCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: PGCGRNITTEDRQSMALGSKWRS*HCSPAW
Trigger: CCAGGCTGGAGAGCAGTGGCATGATCTCCACTTACT...TCCCAGGGCCATGCTTTGCCTGTCCTCTGTCGTGATGTTTCTTCCGCAGCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR GCA 90 bp CAATCTCAGGGCTTCTTGACTCTCCAGGCCACTCAATTCTGGGCTTGTCTGAGAAGGTGCAGGAGACACTaGACCAGCCCCACTGCAGGG +
Preference number: 4 (lower is better)
Translates to: QSQGFLTLQATQFWACLRRCRRH*TSPTAG
Trigger: CCCTGCAGTGGGGCTGGTGCAGTGTCTCCTGCACCT...TCTCAGACAAGCCCAGAATTGAGTGGCCTGGAGAGTCAAGAAGCCCTGAGATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR GCA 90 bp CTTGGACATCACTGTGTCTGGAGCTCAGTTTCCCTAGTCTGCCAACAGTCAAGAGCCTTCACCTCCTGGTaGCTCCCCGACCCCGGGTTT +
Preference number: 4 (lower is better)
Translates to: LGHHCVWSSVSLVCQQSRAFTSW*LPDPGF
Trigger: AAACCCGGGGTCGGGGAGGCACCAGGAGGTGAAGGC...TCTTGACTGTTGGCAGACTAGGGAAACTGAGCTCCAGACACAGTGATGTCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR CCA 90 bp CTTGGACATCACTGTGTCTGGAGCTCAGTTTCCCTAGTCTGCCAACAGTCAAGAGGATCTTCCTCATGGTaGGCAGACGGGCGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: LGHHCVWSSVSLVCQQSRGSSSW*ADGRPR
Trigger: CCTGGGGCGCCCGTCTGCCCACCATGAGGAAGATCC...TCTTGACTGTTGGCAGACTAGGGAAACTGAGCTCCAGACACAGTGATGTCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR CCA 90 bp GTGGCTTCAATCCAGAGCAGAGGTTCAGGCCCTTTGGGGATCAGGGACCTCTTTGGATGGCGATGGCATTaGCGCGGATCTTCCTCATGG +
Preference number: 4 (lower is better)
Translates to: VASIQSRGSGPLGIRDLFGWRWH*RGSSSW
Trigger: CCATGAGGAAGATCCGCGCCAATGCCATCGCCATCC...AAAGAGGTCCCTGATCCCCAAAGGGCCTGAACCTCTGCTCTGGATTGAAGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR CCA 90 bp CCTCTTGAAGGCCCTCTGGTCAGCAGTCCTCTTACATTCAACAGGCGCAGCCCCTTGTCACTCTCCAGCTaGTTGAAGGCGTGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: PLEGPLVSSPLTFNRRSPLSLSS*LKACCL
Trigger: CAGACAGCACGCCTTCAACCAGCTGGAGAGTGACAA...GGGGCTGCGCCTGTTGAATGTAAGAGGACTGCTGACCAGAGGGCCTTCAAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR CCA 90 bp GCCGGAGGGAGAGGCTGTGGCTGCTTTCCAGAATGGCACAGCAAACTGCTGTTCTTGTCACTCTCCAGCTaGTTGAAGGCGTGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: AGGRGCGCFPEWHSKLLFLSLSS*LKACCL
Trigger: CAGACAGCACGCCTTCAACCAGCTGGAGAGTGACAA...GAACAGCAGTTTGCTGTGCCATTCTGGAAAGCAGCCACAGCCTCTCCCTCCGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR CCA 90 bp TCCATCACACCAGGTCTGAGGCACAGGAGCCTCTCGGATACAGGAAACCCAGCTGGAGTAGGACACAGATaGGCAGCTGTAATGGCGGGT +
Preference number: 4 (lower is better)
Translates to: SITPGLRHRSLSDTGNPAGVGHR*AAVMAG
Trigger: ACCCGCCATTACAGCTGCCCATCTGTGTCCTACTCC...AGCTGGGTTTCCTGTATCCGAGAGGCTCCTGTGCCTCAGACCTGGTGTGATGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR CCA 90 bp GAAACTGCTGGAGAGCCCTCCAGAGCAGGTGCTGCGGACCACAGACACTTGGCTTCTCCTGGATCAAGTTaGCAGGAGTTCGGTTCAGGA +
Preference number: 4 (lower is better)
Translates to: ETAGEPSRAGAADHRHLASPGSS*QEFGSG
Trigger: TCCTGAACCGAACTCCTGCCAACTTGATCCAGGAGA...AGCCAAGTGTCTGTGGTCCGCAGCACCTGCTCTGGAGGGCTCTCCAGCAGTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR CCA 90 bp AATGCCCGAGAGAGAGGTCTCAGCCTGACACATGGCCAAATAGAAGTGGAGTCTGCGTCCTTATGGGCCTaGTGGGGTCTGTCCGGGTCA +
Preference number: 4 (lower is better)
Translates to: NARERGLSLTHGQIEVESASLWA*WGLSGS
Trigger: TGACCCGGACAGACCCCACCAGGCCCATAAGGACGC...AGACTCCACTTCTATTTGGCCATGTGTCAGGCTGAGACCTCTCTCTCGGGCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448469.8
CDS-3UTR CCA 90 bp GCTCAAGGATTTGCCCTCAGAGAGGTGGGTGCTCTAGGTGCAGGAGACACTGCAACATTAAGGTGGAGGTaGCAGCCAGGCACTTCCCCT +
Preference number: 4 (lower is better)
Translates to: AQGFALREVGALGAGDTATLRWR*QPGTSP
Trigger: AGGGGAAGTGCCTGGCTGCCACCTCCACCTTAATGT...TGCAGTGTCTCCTGCACCTAGAGCACCCACCTCTCTGAGGGCAAATCCTTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR CCA 90 bp CCTGGCTGCGGAAGAAACATCACGACAGAGGACAGGCAAAGCATGGCCCTGGGATCCAAGACAAGGCCGTaGGGTAGATGTGTGGATGTG +
Preference number: 4 (lower is better)
Translates to: PGCGRNITTEDRQSMALGSKTRP*GRCVDV
Trigger: CACATCCACACATCTACCCCACGGCCTTGTCTTGGA...TCCCAGGGCCATGCTTTGCCTGTCCTCTGTCGTGATGTTTCTTCCGCAGCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR CCA 90 bp GAACAGCTCCCTGCTGTACAAATGGGAGTCTGGCCCTGGTGCAGAAGTCCCTTCAGACCCCCAGGGTCCTaGTACCAACAGTCATTTGCC +
Preference number: 4 (lower is better)
Translates to: EQLPAVQMGVWPWCRSPFRPPGS*YQQSFA
Trigger: GGCAAATGACTGTTGGTACCAGGACCCTGGGGGTCT...GAAGGGACTTCTGCACCAGGGCCAGACTCCCATTTGTACAGCAGGGAGCTGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR CCA 90 bp CCTCTTGAAGGCCCTCTGGTCAGCAGTCCTCTTACATTCAACAGGCGCAGCCCCAGCTTGGGCAGACAGTaGCTTCAATCCAGAGCAGAG +
Preference number: 4 (lower is better)
Translates to: PLEGPLVSSPLTFNRRSPSLGRQ*LQSRAE
Trigger: CTCTGCTCTGGATTGAAGCCACTGTCTGCCCAAGCT...GGGGCTGCGCCTGTTGAATGTAAGAGGACTGCTGACCAGAGGGCCTTCAAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR CCA 90 bp GAGAAGCTGGCTGGGTTGCCCCCTCCTTCTGGAGGAGCACTGACTCAGACCATCTGCGCCTGGCTTGAATaGGTCTTAAAGACCCAAGAG +
Preference number: 4 (lower is better)
Translates to: EKLAGLPPPSGGALTQTICAWLE*VLKTQE
Trigger: CTCTTGGGTCTTTAAGACCCATTCAAGCCAGGCGCA...GATGGTCTGAGTCAGTGCTCCTCCAGAAGGAGGGGGCAACCCAGCCAGCTTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR CCA 90 bp CAAATTCCCTGGGGGTCAAGGACCATGTCCGTTCATCCTTGTGGCCAACATGATTTGGGTCCCATTCCCTaGGTGGTGAGGGAGCCCTCC +
Preference number: 4 (lower is better)
Translates to: QIPWGSRTMSVHPCGQHDLGPIP*VVREPS
Trigger: GGAGGGCTCCCTCACCACCCAGGGAATGGGACCCAA...ATCATGTTGGCCACAAGGATGAACGGACATGGTCCTTGACCCCCAGGGAATTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR CCA 90 bp CAAATTCCCTGGGGGTCAAGGACCATGTCCGTTCATCCTTGTGGCCAACATGATATGCCATCGGGAGCCTaGCAGGACTTGCAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: QIPWGSRTMSVHPCGQHDMPSGA*QDLQGQ
Trigger: CTGCCCCTGCAAGTCCTGCCAGGCTCCCGATGGCAT...ATCATGTTGGCCACAAGGATGAACGGACATGGTCCTTGACCCCCAGGGAATTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR CCA 90 bp CACCCCCTAGTGGGAAGCTGCCTTCTTTGTAGGGATGAAGTGTGGGGCCAGCAGAGAAGGCATTGGCAGTaGGATAGCTGGCTCATCCTG +
Preference number: 4 (lower is better)
Translates to: HPLVGSCLLCRDEVWGQQRRHWQ*DSWLIL
Trigger: CAGGATGAGCCAGCTATCCCACTGCCAATGCCTTCT...CTGCTGGCCCCACACTTCATCCCTACAAAGAAGGCAGCTTCCCACTAGGGGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR CCA 90 bp CACCCCCTAGTGGGAAGCTGCCTTCTTTGTAGGGATGAAGTGTGGGGCCAGCAGGATTCCAGAAGGCATTaGCAGTGGGATAGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: HPLVGSCLLCRDEVWGQQDSRRH*QWDSWL
Trigger: GAGCCAGCTATCCCACTGCCAATGCCTTCTGGAATC...CTGCTGGCCCCACACTTCATCCCTACAAAGAAGGCAGCTTCCCACTAGGGGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR CCA 90 bp GGCTCTTGCTTTTCTGTAGTTTGCAGAAGTTCCTGTCCAGATCAGAGGAGGAGGGTGGGGCCAGCAGGGTaGTGGGAGACTGGAGGTCTC +
Preference number: 4 (lower is better)
Translates to: GSCFSVVCRSSCPDQRRRVGPAG*WETGGL
Trigger: GAGACCTCCAGTCTCCCACCACCCTGCTGGCCCCAC...CCTCCTCCTCTGATCTGGACAGGAACTTCTGCAAACTACAGAAAAGCAAGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR TCA 90 bp TCTGGTCAGCAGTCCTCTTACATTCAACAGGCGCAGCCCCGGCTCCCCAGCCCCAGTCATCCACTAAAATaGTCTCCTGGATCAAGTTGG +
Preference number: 4 (lower is better)
Translates to: SGQQSSYIQQAQPRLPSPSHPLK*SPGSSW
Trigger: CCAACTTGATCCAGGAGATCATTTTAGTGGATGACT...GGGGCTGGGGAGCCGGGGCTGCGCCTGTTGAATGTAAGAGGACTGCTGACCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR TCA 90 bp GCTCAAGGATTTGCCCTCAGAGAGGTGGGTGCTCTAGGTGCAGGAGACACTGCAGCTGTGTTCTGGCCCTaGGATTCTAAGCAGTTCACC +
Preference number: 4 (lower is better)
Translates to: AQGFALREVGALGAGDTAAVFWP*DSKQFT
Trigger: GGTGAACTGCTTAGAATCTCAGGGCCAGAACACAGC...TGCAGTGTCTCCTGCACCTAGAGCACCCACCTCTCTGAGGGCAAATCCTTGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR TCA 90 bp AGGCTGAGAGATGAAATAACTTATTCAAGAGCTCAGTCAGGCGCAGTGGCTCACGCCTGGGCGTCAGCCTaGCACTTGCTGGTCACCAGC +
Preference number: 4 (lower is better)
Translates to: RLRDEITYSRAQSGAVAHAWASA*HLLVTS
Trigger: GCTGGTGACCAGCAAGTGTCAGGCTGACGCCCAGGC...GTGAGCCACTGCGCCTGACTGAGCTCTTGAATAAGTTATTTCATCTCTCAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR GCA 90 bp GCTCAAGGATTTGCCCTCAGAGAGGTGGGTGCTCTAGGTGCAGGAGACACTGCAAAGCAGTTCACCCCCTaGTTAATGATGCCGGGGAGT +
Preference number: 4 (lower is better)
Translates to: AQGFALREVGALGAGDTAKQFTP*LMMPGS
Trigger: ACTCCCCGGCATCATTAAGCAGGGGGTGAACTGCTT...TGCAGTGTCTCCTGCACCTAGAGCACCCACCTCTCTGAGGGCAAATCCTTGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR GCA 90 bp GAGTGCTGCCGAGAGGACGCTGGTGAGAGTCAGGAGGCGAAACTGCTGGAGAGCTTTCTCCTCCATTTCTaGTTGCCTTCTCTAGGGTTG +
Preference number: 4 (lower is better)
Translates to: ECCREDAGESQEAKLLESFLLHF*LPSLGL
Trigger: CAACCCTAGAGAAGGCAAGCAGAAATGGAGGAGAAA...GCTCTCCAGCAGTTTCGCCTCCTGACTCTCACCAGCGTCCTCTCGGCAGCACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR GCA 90 bp CCTCTTGAAGGCCCTCTGGTCAGCAGTCCTCTTACATTCAACAGGCGCAGCCCCTGTGGTAGGTATATCTaGCCCAGGCTGGTCTGCTTT +
Preference number: 4 (lower is better)
Translates to: PLEGPLVSSPLTFNRRSPCGRYI*PRLVCF
Trigger: AAAGCAGACCAGCCTGGGGCAGATATACCTACCACA...GGGGCTGCGCCTGTTGAATGTAAGAGGACTGCTGACCAGAGGGCCTTCAAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR GCA 90 bp GAGTGCTGCCGAGAGGACGCTGGTGAGAGTCAGGAGGCGAAACTGCTGGAGAGCTACAGACGTTATAAATaGCAGCCTTTCCCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: ECCREDAGESQEAKLLESYRRYK*QPFPSR
Trigger: CCTGGAAGGGAAAGGCTGGCATTTATAACGTCTGTA...GCTCTCCAGCAGTTTCGCCTCCTGACTCTCACCAGCGTCCTCTCGGCAGCACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR GCA 90 bp AATTGTCCTCAGATGGCTCTGGAGCCTCAGTCCAGGTCGGCTACTCAGACAGCCCCAGGAGGCAGAGCTTaGAGTAAGTGGAGATCATGC +
Preference number: 4 (lower is better)
Translates to: NCPQMALEPQSRSATQTAPGGRA*SKWRSC
Trigger: GCATGATCTCCACTTACTGCAAGCTCTGCCTCCTGG...GGCTGTCTGAGTAGCCGACCTGGACTGAGGCTCCAGAGCCATCTGAGGACAATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR GCA 90 bp CCTGGCTGCGGAAGAAACATCACGACAGAGGACAGGCAAAGCATGGCCCTGGGATTGGAAAGGGCCAGATaGTTTGCGATCAGGCTTCAC +
Preference number: 4 (lower is better)
Translates to: PGCGRNITTEDRQSMALGLERAR*FAIRLH
Trigger: GTGAAGCCTGATCGCAAAGCATCTGGCCCTTTCCAA...TCCCAGGGCCATGCTTTGCCTGTCCTCTGTCGTGATGTTTCTTCCGCAGCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR GCA 90 bp GCCCTCTGCCTTAGATGGGGCTCTTGTTCTGCAGGTCACCATAGTTCCTGCCTGGCAAGGAGACTCACCTaGTTGCCTTCTCTAGGGTTG +
Preference number: 4 (lower is better)
Translates to: ALCLRWGSCSAGHHSSCLARRLT*LPSLGL
Trigger: CAACCCTAGAGAAGGCAAGCAGGTGAGTCTCCTTGC...CAGGCAGGAACTATGGTGACCTGCAGAACAAGAGCCCCATCTAAGGCAGAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR GCA 90 bp CAATCTCAGGGCTTCTTGACTCTCCAGGCCACTCAATTCTGGGCTTGTCTGAGAAGGCACCCTCCTCACTaGTTGCACCGACTGAGGCAG +
Preference number: 4 (lower is better)
Translates to: QSQGFLTLQATQFWACLRRHPPH*LHRLRQ
Trigger: CTGCCTCAGTCGGTGCAAGCAGTGAGGAGGGTGCCT...TCTCAGACAAGCCCAGAATTGAGTGGCCTGGAGAGTCAAGAAGCCCTGAGATTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR GCA 90 bp CAGTCATGCCCCTCATTTAAATCAGGCTGTGTGTTCCTATGTAAGAGGCTGCCCGGGGCTCCTGGTCAGTaGCTTCACCTCCTGGTGCCT +
Preference number: 4 (lower is better)
Translates to: QSCPSFKSGCVFLCKRLPGAPGQ*LHLLVP
Trigger: AGGCACCAGGAGGTGAAGGCACTGACCAGGAGCCCC...GGGCAGCCTCTTACATAGGAACACACAGCCTGATTTAAATGAGGGGCATGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR CCA 90 bp CAAATTCCCTGGGGGTCAAGGACCATGTCCGTTCATCCTTGTGGCCAACATGATGATGACGCTGGTGGCTaGCAGGTCCGAGGAGTAGGA +
Preference number: 4 (lower is better)
Translates to: QIPWGSRTMSVHPCGQHDDDAGG*QVRGVG
Trigger: TCCTACTCCTCGGACCTGCCAGCCACCAGCGTCATC...ATCATGTTGGCCACAAGGATGAACGGACATGGTCCTTGACCCCCAGGGAATTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR CCA 90 bp CTGCAGGTCACCATAGTTCCTGCCTGGTCCCGACTTTTCTCCTATTGGGGTTTTCTGTGCGCAGCAGGGTaGAACGGGCCTCATTGTGGA +
Preference number: 4 (lower is better)
Translates to: LQVTIVPAWSRLFSYWGFLCAAG*NGPHCG
Trigger: TCCACAATGAGGCCCGTTCCACCCTGCTGCGCACAG...AAAACCCCAATAGGAGAAAAGTCGGGACCAGGCAGGAACTATGGTGACCTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR CCA 90 bp CCTGGCTGCGGAAGAAACATCACGACAGAGGACAGGCAAAGCATGGCCCTGGGATCTCCTGGATCAAGTTaGCAGGAGTTCGGTTCAGGA +
Preference number: 4 (lower is better)
Translates to: PGCGRNITTEDRQSMALGSPGSS*QEFGSG
Trigger: TCCTGAACCGAACTCCTGCCAACTTGATCCAGGAGA...TCCCAGGGCCATGCTTTGCCTGTCCTCTGTCGTGATGTTTCTTCCGCAGCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR CCA 90 bp CTTGGACATCACTGTGTCTGGAGCTCAGTTTCCCTAGTCTGCCAACAGTCAAGAGCGTCCTTATGGGCCTaGTGGGGTCTGTCCGGGTCA +
Preference number: 4 (lower is better)
Translates to: LGHHCVWSSVSLVCQQSRASLWA*WGLSGS
Trigger: TGACCCGGACAGACCCCACCAGGCCCATAAGGACGC...TCTTGACTGTTGGCAGACTAGGGAAACTGAGCTCCAGACACAGTGATGTCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR CCA 90 bp TCTGGTCAGCAGTCCTCTTACATTCAACAGGCGCAGCCCCGGCTCCCCAGCCCCTCATACTTTCCCAAGTaGTTAAACCAGGACTTGTCG +
Preference number: 4 (lower is better)
Translates to: SGQQSSYIQQAQPRLPSPSYFPK*LNQDLS
Trigger: CGACAAGTCCTGGTTTAACCACTTGGGAAAGTATGA...GGGGCTGGGGAGCCGGGGCTGCGCCTGTTGAATGTAAGAGGACTGCTGACCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR CCA 90 bp TACGGAAGTGCCTGGGTGGAGGATGGAGTGTTGCTTGGAACATTTATGAGAAGGCTGAACAGCCATGCCTaGGCGGGCTGCGGGTTCTTG +
Preference number: 4 (lower is better)
Translates to: YGSAWVEDGVLLGTFMRRLNSHA*AGCGFL
Trigger: CAAGAACCCGCAGCCCGCCCAGGCATGGCTGTTCAG...CCTTCTCATAAATGTTCCAAGCAACACTCCATCCTCCACCCAGGCACTTCCGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR CCA 90 bp GTCCGCACCCCTAGTACACTCTTCTCCACGCTTCACAGGGCTGAATTAAGCAGGACATTAAGGTGGAGGTaGCAGCCAGGCACTTCCCCT +
Preference number: 4 (lower is better)
Translates to: VRTPSTLFSTLHRAELSRTLRWR*QPGTSP
Trigger: AGGGGAAGTGCCTGGCTGCCACCTCCACCTTAATGT...CCTGCTTAATTCAGCCCTGTGAAGCGTGGAGAAGAGTGTACTAGGGGTGCGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR CCA 90 bp CAGACAGTGGCTTCAATCCAGAGCAGAGGTTCAGGCCCTTTGGGGATCAGGGACCATCTGCAGTATGACTaGGGATCCAGGGGAGGACAT +
Preference number: 4 (lower is better)
Translates to: QTVASIQSRGSGPLGIRDHLQYD*GSRGGH
Trigger: ATGTCCTCCCCTGGATCCCCAGTCATACTGCAGATG...GTCCCTGATCCCCAAAGGGCCTGAACCTCTGCTCTGGATTGAAGCCACTGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR CCA 90 bp GCCCTCTGCCTTAGATGGGGCTCTTGTTCTGCAGGTCACCATAGTTCCTGCCTGCATCTGCAGTATGACTaGGGATCCAGGGGAGGACAT +
Preference number: 4 (lower is better)
Translates to: ALCLRWGSCSAGHHSSCLHLQYD*GSRGGH
Trigger: ATGTCCTCCCCTGGATCCCCAGTCATACTGCAGATG...CAGGCAGGAACTATGGTGACCTGCAGAACAAGAGCCCCATCTAAGGCAGAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR CCA 90 bp GTGGCTTCAATCCAGAGCAGAGGTTCAGGCCCTTTGGGGATCAGGGACCTCTTTCGTGGGGTAGATGTGTaGATGTGTTCTCAGCGGCTG +
Preference number: 4 (lower is better)
Translates to: VASIQSRGSGPLGIRDLFRGVDV*MCSQRL
Trigger: CAGCCGCTGAGAACACATCCACACATCTACCCCACG...AAAGAGGTCCCTGATCCCCAAAGGGCCTGAACCTCTGCTCTGGATTGAAGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR CCA 90 bp CAGACAGTGGCTTCAATCCAGAGCAGAGGTTCAGGCCCTTTGGGGATCAGGGACAGCTTGGGCAGACAGTaGCTTCAATCCAGAGCAGAG +
Preference number: 4 (lower is better)
Translates to: QTVASIQSRGSGPLGIRDSLGRQ*LQSRAE
Trigger: CTCTGCTCTGGATTGAAGCCACTGTCTGCCCAAGCT...GTCCCTGATCCCCAAAGGGCCTGAACCTCTGCTCTGGATTGAAGCCACTGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR CCA 90 bp AATGCCCGAGAGAGAGGTCTCAGCCTGACACATGGCCAAATAGAAGTGGAGTCTGTCCATGCCCGAGTGTaGCCCAGGCCTTCTAGTCCA +
Preference number: 4 (lower is better)
Translates to: NARERGLSLTHGQIEVESVHARV*PRPSSP
Trigger: TGGACTAGAAGGCCTGGGCCACACTCGGGCATGGAC...AGACTCCACTTCTATTTGGCCATGTGTCAGGCTGAGACCTCTCTCTCGGGCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448469.8
CDS-3UTR CCA 90 bp CTGGGAGACATCCCCCGCAGGCCTTGGGGTGCTGGAACCCTGGGACGACAGTCAGCGTTTATTTTTACCTaGGTAGGTTCAGCTTCTGAT +
Preference number: 4 (lower is better)
Translates to: LGDIPRRPWGAGTLGRQSAFIFT*VGSASD
Trigger: ATCAGAAGCTGAACCTACCCAGGTAAAAATAAACGC...TGACTGTCGTCCCAGGGTTCCAGCACCCCAAGGCCTGCGGGGGATGTCTCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR CCA 90 bp GAGAAGCTGGCTGGGTTGCCCCCTCCTTCTGGAGGAGCACTGACTCAGACCATCAGAGCTTGCAGTAAGTaGAGATCATGCCACTGCTCT +
Preference number: 4 (lower is better)
Translates to: EKLAGLPPPSGGALTQTIRACSK*RSCHCS
Trigger: AGAGCAGTGGCATGATCTCCACTTACTGCAAGCTCT...GATGGTCTGAGTCAGTGCTCCTCCAGAAGGAGGGGGCAACCCAGCCAGCTTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR CCA 90 bp TTGGCCTATGAAAGACAGGGGGCTCCTGTGGTAGGTATATCTGCCCCAGGCTGGCTCTTGCTAAGAATGTaGGCACCCACAGGCACAGGA +
Preference number: 4 (lower is better)
Translates to: LAYERQGAPVVGISAPGWLLLRM*APTGTG
Trigger: TCCTGTGCCTGTGGGTGCCCACATTCTTAGCAAGAG...CCAGCCTGGGGCAGATATACCTACCACAGGAGCCCCCTGTCTTTCATAGGCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448469.8
CDS-3UTR CCA 90 bp GCCCTCTGCCTTAGATGGGGCTCTTGTTCTGCAGGTCACCATAGTTCCTGCCTGCTGGTCATGCCAGCTTaGACATCACTGTGTCTGGAG +
Preference number: 4 (lower is better)
Translates to: ALCLRWGSCSAGHHSSCLLVMPA*TSLCLE
Trigger: CTCCAGACACAGTGATGTCCAAGCTGGCATGACCAG...CAGGCAGGAACTATGGTGACCTGCAGAACAAGAGCCCCATCTAAGGCAGAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR CCA 90 bp CCTCCAGCAATGCCCAGCTGGAGAGAGTATGGCCATCCTCACCCCAGGGAGTCGCAGGCCACTCAATTCTaGGCTTGTCTGAGAAACAAT +
Preference number: 4 (lower is better)
Translates to: PPAMPSWREYGHPHPRESQATQF*ACLRNN
Trigger: ATTGTTTCTCAGACAAGCCCAGAATTGAGTGGCCTG...CGACTCCCTGGGGTGAGGATGGCCATACTCTCTCCAGCTGGGCATTGCTGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR CAA 72 bp CACATCACCCACTGTCCCATCTCCACATCTTGGTTCTaGCGGATTCCTTGTGAGGTAAGCAGGGGAGGGAGC +
Preference number: 4 (lower is better)
Translates to: HITHCPISTSWF*RIPCEVSRGGS
Trigger: GCTCCCTCCCCTGCTTACCTCACAAGGAATCCGCAAGAACCAAGATGTGGAGATGGGACAGTGGGTGATGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR TCA 90 bp GGGAGACTGGAGGTCTCGCATCACAGAGTCATGCAGGGGCTCCTGGTCAGTGCCAGTCATCCACTAAAATaGTCTCCTGGATCAAGTTGG +
Preference number: 4 (lower is better)
Translates to: GRLEVSHHRVMQGLLVSASHPLK*SPGSSW
Trigger: CCAACTTGATCCAGGAGATCATTTTAGTGGATGACT...GGCACTGACCAGGAGCCCCTGCATGACTCTGTGATGCGAGACCTCCAGTCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR TCA 90 bp AATGCCCGAGAGAGAGGTCTCAGCCTGACACATGGCCAAATAGAAGTGGAGTCTACAGAGAGACCCTCTTaGAGGCCCTCTGGTCAGCAG +
Preference number: 4 (lower is better)
Translates to: NARERGLSLTHGQIEVESTERPS*RPSGQQ
Trigger: CTGCTGACCAGAGGGCCTTCAAGAGGGTCTCTCTGT...AGACTCCACTTCTATTTGGCCATGTGTCAGGCTGAGACCTCTCTCTCGGGCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448469.8
CDS-3UTR TCA 90 bp TTGGCCTATGAAAGACAGGGGGCTCCTGTGGTAGGTATATCTGCCCCAGGCTGGGATAAGTGCAGAGCCTaGTCTGACCACAGCAAAGGA +
Preference number: 4 (lower is better)
Translates to: LAYERQGAPVVGISAPGWDKCRA*SDHSKG
Trigger: TCCTTTGCTGTGGTCAGATCAGGCTCTGCACTTATC...CCAGCCTGGGGCAGATATACCTACCACAGGAGCCCCCTGTCTTTCATAGGCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR TCA 90 bp GTGCCTGGCAGTGAAGACCTCTTCCCATTAGAGAAGCTGGCTGGGTTGCCCCCTGAAGTATGTCCTGCCTaGATTTGTACCACTGCCTTC +
Preference number: 4 (lower is better)
Translates to: VPGSEDLFPLEKLAGLPPEVCPA*ICTTAF
Trigger: GAAGGCAGTGGTACAAATTCAGGCAGGACATACTTC...AGGGGGCAACCCAGCCAGCTTCTCTAATGGGAAGAGGTCTTCACTGCCAGGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR TCA 90 bp GGTCTGCTTTGTAGGGGAGACCCCCAGGGTCCTGGTACCAACAGTCATTTGCCCCACGCTTCACAGGGCTaGATTAAGCAGGAGAAATTG +
Preference number: 4 (lower is better)
Translates to: GLLCRGDPQGPGTNSHLPHASQG*IKQEKL
Trigger: CAATTTCTCCTGCTTAATTCAGCCCTGTGAAGCGTG...GGGCAAATGACTGTTGGTACCAGGACCCTGGGGGTCTCCCCTACAAAGCAGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR TCA 90 bp GCAGGGTGTGGGGATAGCAGGAGCAGTTCCAAGACAAGGCCGTGGGGTAGATGTATGGTGGGTATTTGCTaGTGGTCCTGGCAGAAATGT +
Preference number: 4 (lower is better)
Translates to: AGCGDSRSSSKTRPWGRCMVGIC*WSWQKC
Trigger: ACATTTCTGCCAGGACCATCAGCAAATACCCACCAT...ACATCTACCCCACGGCCTTGTCTTGGAACTGCTCCTGCTATCCCCACACCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448469.8
CDS-3UTR TCA 90 bp CACCCCCTAGTGGGAAGCTGCCTTCTTTGTAGGGATGAAGTGTGGGGCCAGCAGCACAGATCCTCGCTCTaGAGGGCTTATTTGAGTCAA +
Preference number: 4 (lower is better)
Translates to: HPLVGSCLLCRDEVWGQQHRSSL*RAYLSQ
Trigger: TTGACTCAAATAAGCCCTTCAGAGCGAGGATCTGTG...CTGCTGGCCCCACACTTCATCCCTACAAAGAAGGCAGCTTCCCACTAGGGGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR TCA 90 bp CAAATTCCCTGGGGGTCAAGGACCATGTCCGTTCATCCTTGTGGCCAACATGATCTTGCGGATTCCTTGTaGGGTAAGCAGGGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: QIPWGSRTMSVHPCGQHDLADSL*GKQGRE
Trigger: CTCCCTCCCCTGCTTACCTCACAAGGAATCCGCAAG...ATCATGTTGGCCACAAGGATGAACGGACATGGTCCTTGACCCCCAGGGAATTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR TCA 90 bp CAATCTCAGGGCTTCTTGACTCTCCAGGCCACTCAATTCTGGGCTTGTCTGAGAAGGCAGGAGTGCTTGTaGCCATGTGGAGGAAGCCCA +
Preference number: 4 (lower is better)
Translates to: QSQGFLTLQATQFWACLRRQECL*PCGGSP
Trigger: TGGGCTTCCTCCACATGGTCACAAGCACTCCTGCCT...TCTCAGACAAGCCCAGAATTGAGTGGCCTGGAGAGTCAAGAAGCCCTGAGATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR TCA 90 bp GCCGGAGGGAGAGGCTGTGGCTGCTTTCCAGAATGGCACAGCAAACTGCTGTTCATTTATGAGAAGGGATaGGAGGCAGAGACCCAGGTT +
Preference number: 4 (lower is better)
Translates to: AGGRGCGCFPEWHSKLLFIYEKG*EAETQV
Trigger: AACCTGGGTCTCTGCCTCTCATCCCTTCTCATAAAT...GAACAGCAGTTTGCTGTGCCATTCTGGAAAGCAGCCACAGCCTCTCCCTCCGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR GCA 90 bp CAGTCATGCCCCTCATTTAAATCAGGCTGTGTGTTCCTATGTAAGAGGCTGCCCGCCAGGCACTTCCCCTaGTGCTGGATGAGGTGGTCA +
Preference number: 4 (lower is better)
Translates to: QSCPSFKSGCVFLCKRLPARHFP*CWMRWS
Trigger: TGACCACCTCATCCAGCAGCAGGGGAAGTGCCTGGC...GGGCAGCCTCTTACATAGGAACACACAGCCTGATTTAAATGAGGGGCATGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR GCA 90 bp AGGCTGAGAGATGAAATAACTTATTCAAGAGCTCAGTCAGGCGCAGTGGCTCACCTGGGGAGAGGCCTTTaGCCTGGGCCCAGTTCTGTC +
Preference number: 4 (lower is better)
Translates to: RLRDEITYSRAQSGAVAHLGRGL*PGPSSV
Trigger: GACAGAACTGGGCCCAGGGCAAAGGCCTCTCCCCAG...GTGAGCCACTGCGCCTGACTGAGCTCTTGAATAAGTTATTTCATCTCTCAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR GCA 90 bp GAACAGCTCCCTGCTGTACAAATGGGAGTCTGGCCCTGGTGCAGAAGTCCCTTCTCAGGAACAGCTCCCTaGTGTACAAATGGGAGTCTG +
Preference number: 4 (lower is better)
Translates to: EQLPAVQMGVWPWCRSPFSGTAP*CTNGSL
Trigger: CAGACTCCCATTTGTACAGCAGGGAGCTGTTCCTGA...GAAGGGACTTCTGCACCAGGGCCAGACTCCCATTTGTACAGCAGGGAGCTGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR GCA 90 bp AATGCCCGAGAGAGAGGTCTCAGCCTGACACATGGCCAAATAGAAGTGGAGTCTCCTCTCCATCCATGCTaGCCAATTTCCCCTGGCCCT +
Preference number: 4 (lower is better)
Translates to: NARERGLSLTHGQIEVESPLHPC*PISPGP
Trigger: AGGGCCAGGGGAAATTGGGCAGCATGGATGGAGAGG...AGACTCCACTTCTATTTGGCCATGTGTCAGGCTGAGACCTCTCTCTCGGGCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448469.8
CDS-3UTR GCA 90 bp CACCCCCTAGTGGGAAGCTGCCTTCTTTGTAGGGATGAAGTGTGGGGCCAGCAGGACTCCACCTCTCTGTaGATCACTTTCTTCCTTGAC +
Preference number: 4 (lower is better)
Translates to: HPLVGSCLLCRDEVWGQQDSTSL*ITFFLD
Trigger: GTCAAGGAAGAAAGTGATGCACAGAGAGGTGGAGTC...CTGCTGGCCCCACACTTCATCCCTACAAAGAAGGCAGCTTCCCACTAGGGGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR GCA 90 bp CTGCAGGTCACCATAGTTCCTGCCTGGTCCCGACTTTTCTCCTATTGGGGTTTTACCAGCTTTAAGCCCTaGCCTTCCCAGCAGGGCTCT +
Preference number: 4 (lower is better)
Translates to: LQVTIVPAWSRLFSYWGFTSFKP*PSQQGS
Trigger: AGAGCCCTGCTGGGAAGGGCAGGGCTTAAAGCTGGT...AAAACCCCAATAGGAGAAAAGTCGGGACCAGGCAGGAACTATGGTGACCTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR CCA 90 bp CAAATTCCCTGGGGGTCAAGGACCATGTCCGTTCATCCTTGTGGCCAACATGATCAGCCTTCAGCTGCTTaGCCGACAGGTAGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: QIPWGSRTMSVHPCGQHDQPSAA*PTGRPS
Trigger: AGAAGGCCTACCTGTCGGCCAAGCAGCTGAAGGCTG...ATCATGTTGGCCACAAGGATGAACGGACATGGTCCTTGACCCCCAGGGAATTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR CCA 90 bp GCCCTCTGCCTTAGATGGGGCTCTTGTTCTGCAGGTCACCATAGTTCCTGCCTGTCTCCTGGATCAAGTTaGCAGGAGTTCGGTTCAGGA +
Preference number: 4 (lower is better)
Translates to: ALCLRWGSCSAGHHSSCLSPGSS*QEFGSG
Trigger: TCCTGAACCGAACTCCTGCCAACTTGATCCAGGAGA...CAGGCAGGAACTATGGTGACCTGCAGAACAAGAGCCCCATCTAAGGCAGAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR CCA 90 bp TCTGGCCCTGGTGCAGAAGTCCCTTCTGCTGCCCTGCCCATAGGCTTTCGGGGGACTAAAATGATCTCCTaGATCAAGTTGGCAGGAGTT +
Preference number: 4 (lower is better)
Translates to: SGPGAEVPSAALPIGFRGTKMIS*IKLAGV
Trigger: AACTCCTGCCAACTTGATCCAGGAGATCATTTTAGT...CCCCCGAAAGCCTATGGGCAGGGCAGCAGAAGGGACTTCTGCACCAGGGCCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR CCA 90 bp TGGAGTCTGTTTAATAAACTACGCCCGAATCTTCCCCTAAAGATCCCTCTGCAGCTCACCACGCGGGTGTaGTCCTCCTTCACCCGCTGC +
Preference number: 4 (lower is better)
Translates to: WSLFNKLRPNLPLKIPLQLTTRV*SSFTRC
Trigger: GCAGCGGGTGAAGGAGGACCACACCCGCGTGGTGAG...CTGCAGAGGGATCTTTAGGGGAAGATTCGGGCGTAGTTTATTAAACAGACTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448469.8
CDS-3UTR CCA 90 bp GAGAGGACGCTGGTGAGAGTCAGGAGGCGAAACTGCTGGAGAGCCCTCCAGAGCGCTGTGAAAAGGAACTaGGAGTTCTCTTCACAAACA +
Preference number: 4 (lower is better)
Translates to: ERTLVRVRRRNCWRALQSAVKRN*EFSSQT
Trigger: TGTTTGTGAAGAGAACTCCCAGTTCCTTTTCACAGC...GCTCTGGAGGGCTCTCCAGCAGTTTCGCCTCCTGACTCTCACCAGCGTCCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR CCA 90 bp AGGCTGAGAGATGAAATAACTTATTCAAGAGCTCAGTCAGGCGCAGTGGCTCACGGGCACCACAGGGCATaGAGGCCGACGAGCAAGCTA +
Preference number: 4 (lower is better)
Translates to: RLRDEITYSRAQSGAVAHGHHRA*RPTSKL
Trigger: TAGCTTGCTCGTCGGCCTCCATGCCCTGTGGTGCCC...GTGAGCCACTGCGCCTGACTGAGCTCTTGAATAAGTTATTTCATCTCTCAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR CCA 90 bp GACTTGCTCCTAAGCCCAGACCAAGCTGGACATTGTAGCCAAGGTGTATTCTCTAGTAGGGCCACCTGTTaGCCCCCACCAGAGCAGTCA +
Preference number: 4 (lower is better)
Translates to: DLLLSPDQAGHCSQGVFSSRATC*PPPEQS
Trigger: TGACTGCTCTGGTGGGGGCCAACAGGTGGCCCTACT...AGAGAATACACCTTGGCTACAATGTCCAGCTTGGTCTGGGCTTAGGAGCAAGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR CCA 90 bp GTGGCTTCAATCCAGAGCAGAGGTTCAGGCCCTTTGGGGATCAGGGACCTCTTTACTCAGGGATGTGTGTaGCTACCCGTCCTTTCAGTG +
Preference number: 4 (lower is better)
Translates to: VASIQSRGSGPLGIRDLFTQGCV*LPVLSV
Trigger: CACTGAAAGGACGGGTAGCCACACACATCCCTGAGT...AAAGAGGTCCCTGATCCCCAAAGGGCCTGAACCTCTGCTCTGGATTGAAGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448469.8
CDS-3UTR CCA 90 bp GGCCCGGATTCCAGAAGGCATTGGCAGTGGGATAGCTGGCTCATCCTGTCCTCCAGAGTGTCGGATCAATaGAAAAAGCAGTGCTCACGT +
Preference number: 4 (lower is better)
Translates to: GPDSRRHWQWDSWLILSSRVSDQ*KKQCSR
Trigger: ACGTGAGCACTGCTTTTTCCATTGATCCGACACTCT...GGAGGACAGGATGAGCCAGCTATCCCACTGCCAATGCCTTCTGGAATCCGGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR CCA 90 bp CACCCCCTAGTGGGAAGCTGCCTTCTTTGTAGGGATGAAGTGTGGGGCCAGCAGAGCACAGAAGAGAGCTaGCTGGATTCTGGAAATCCA +
Preference number: 4 (lower is better)
Translates to: HPLVGSCLLCRDEVWGQQSTEES*LDSGNP
Trigger: TGGATTTCCAGAATCCAGCCAGCTCTCTTCTGTGCT...CTGCTGGCCCCACACTTCATCCCTACAAAGAAGGCAGCTTCCCACTAGGGGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR CCA 90 bp TACGGAAGTGCCTGGGTGGAGGATGGAGTGTTGCTTGGAACATTTATGAGAAGGCTCAGTGGGAGGGGGTaGGCGTGGGCTCAAGGATTT +
Preference number: 4 (lower is better)
Translates to: YGSAWVEDGVLLGTFMRRLSGRG*AWAQGF
Trigger: AAATCCTTGAGCCCACGCCCACCCCCTCCCACTGAG...CCTTCTCATAAATGTTCCAAGCAACACTCCATCCTCCACCCAGGCACTTCCGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR CCA 90 bp TACGGAAGTGCCTGGGTGGAGGATGGAGTGTTGCTTGGAACATTTATGAGAAGGGAGATAATTCCTCAGTaGGAGGGGGTGGGCGTGGGC +
Preference number: 4 (lower is better)
Translates to: YGSAWVEDGVLLGTFMRREIIPQ*EGVGVG
Trigger: GCCCACGCCCACCCCCTCCCACTGAGGAATTATCTC...CCTTCTCATAAATGTTCCAAGCAACACTCCATCCTCCACCCAGGCACTTCCGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR CCA 90 bp GCTCAAGGATTTGCCCTCAGAGAGGTGGGTGCTCTAGGTGCAGGAGACACTGCAGATCTGTACATTCTCTaGCACAAGGTAGGCACCCAG +
Preference number: 4 (lower is better)
Translates to: AQGFALREVGALGAGDTADLYIL*HKVGTQ
Trigger: CTGGGTGCCTACCTTGTGCCAGAGAATGTACAGATC...TGCAGTGTCTCCTGCACCTAGAGCACCCACCTCTCTGAGGGCAAATCCTTGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR CCA 90 bp GGGAGACTGGAGGTCTCGCATCACAGAGTCATGCAGGGGCTCCTGGTCAGTGCCGGATGGAGTGTTGCTTaGAACATTTATGAGAAGGGA +
Preference number: 4 (lower is better)
Translates to: GRLEVSHHRVMQGLLVSAGWSVA*NIYEKG
Trigger: TCCCTTCTCATAAATGTTCCAAGCAACACTCCATCC...GGCACTGACCAGGAGCCCCTGCATGACTCTGTGATGCGAGACCTCCAGTCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR CAA 72 bp GCCTTGGGGTGCTGGAACCCTGGGACGACAGTCATATaGTCCAGGTTATTTCTCCCAACTGCAGATGGAGAC +
Preference number: 4 (lower is better)
Translates to: ALGCWNPGTTVI*SRLFLPTADGD
Trigger: GTCTCCATCTGCAGTTGGGAGAAATAACCTGGACAATATGACTGTCGTCCCAGGGTTCCAGCACCCCAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR TCA 90 bp CAATCTCAGGGCTTCTTGACTCTCCAGGCCACTCAATTCTGGGCTTGTCTGAGAGGGCCTAGAAGTCACTaGCCTGGGTTTGAATCCCAG +
Preference number: 4 (lower is better)
Translates to: QSQGFLTLQATQFWACLRGPRSH*PGFESQ
Trigger: CTGGGATTCAAACCCAGGTCAGTGACTTCTAGGCCC...TCTCAGACAAGCCCAGAATTGAGTGGCCTGGAGAGTCAAGAAGCCCTGAGATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR GCA 90 bp GAACAGCTCCCTGCTGTACAAATGGGAGTCTGGCCCTGGTGCAGAAGTCCCTTCATAAGTAGTAGAAAGTaGCCAGGATCCAGGCTACGG +
Preference number: 4 (lower is better)
Translates to: EQLPAVQMGVWPWCRSPFISSRK*PGSRLR
Trigger: CCGTAGCCTGGATCCTGGGCACTTTCTACTACTTAT...GAAGGGACTTCTGCACCAGGGCCAGACTCCCATTTGTACAGCAGGGAGCTGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR GCA 90 bp AATGCCCGAGAGAGAGGTCTCAGCCTGACACATGGCCAAATAGAAGTGGAGTCTGTCCGGGTCATCTTCTaGTCAAGAGGGATCTGCTCC +
Preference number: 4 (lower is better)
Translates to: NARERGLSLTHGQIEVESVRVIF*SRGICS
Trigger: GGAGCAGATCCCTCTTGAGCAGAAGATGACCCGGAC...AGACTCCACTTCTATTTGGCCATGTGTCAGGCTGAGACCTCTCTCTCGGGCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448469.8
CDS-3UTR GCA 90 bp CCTGGCTGCGGAAGAAACATCACGACAGAGGACAGGCAAAGCATGGCCCTGGGAATCCATCCACACTTCTaGAGTGCGCTTAGTATTCCT +
Preference number: 4 (lower is better)
Translates to: PGCGRNITTEDRQSMALGIHPHF*SALSIP
Trigger: AGGAATACTAAGCGCACTGCAGAAGTGTGGATGGAT...TCCCAGGGCCATGCTTTGCCTGTCCTCTGTCGTGATGTTTCTTCCGCAGCCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR GCA 90 bp GAGAGGTCTCAGCCTGACACATGGCCAAATAGAAGTGGAGTCTGTTTAATAAACCATGCCTGGGCGGGCTaGGGGTTCTTGGCAGACCCT +
Preference number: 4 (lower is better)
Translates to: ERSQPDTWPNRSGVCLINHAWAG*GFLADP
Trigger: AGGGTCTGCCAAGAACCCGCAGCCCGCCCAGGCATG...GTTTATTAAACAGACTCCACTTCTATTTGGCCATGTGTCAGGCTGAGACCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448469.8
CDS-3UTR GCA 90 bp AGGCTGAGAGATGAAATAACTTATTCAAGAGCTCAGTCAGGCGCAGTGGCTCACGCCAGGCACTTCCCCTaGTGCTGGATGAGGTGGTCA +
Preference number: 4 (lower is better)
Translates to: RLRDEITYSRAQSGAVAHARHFP*CWMRWS
Trigger: TGACCACCTCATCCAGCAGCAGGGGAAGTGCCTGGC...GTGAGCCACTGCGCCTGACTGAGCTCTTGAATAAGTTATTTCATCTCTCAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR GCA 90 bp AGGACAGGGCTAGACTTGAGCATGTTCAGTTTCACTTTTACAGAAAGGAGGCCCTCCAAGGCCTGCCCTTaGAGTAGGGCCACCTGTTGG +
Preference number: 4 (lower is better)
Translates to: RTGLDLSMFSFTFTERRPSKACP*SRATCW
Trigger: CCAACAGGTGGCCCTACTGCAAGGGCAGGCCTTGGA...GGGCCTCCTTTCTGTAAAAGTGAAACTGAACATGCTCAAGTCTAGCCCTGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR GCA 90 bp CTGTTTAATAAACTACGCCCGAATCTTCCCCTAAAGATCCCTCTGCAGCCTCTTAATTTCCCCTGGCCCTaGCTGCCTGCACAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: LFNKLRPNLPLKIPLQPLNFPWP*LPAQLG
Trigger: GCCCAGCTGTGCAGGCAGGCAGGGCCAGGGGAAATT...AAGAGGCTGCAGAGGGATCTTTAGGGGAAGATTCGGGCGTAGTTTATTAAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448469.8
CDS-3UTR GCA 90 bp GTTCATCCTTGTGGCCAACATGATCTGTACATTCTCTGGCACAAGGTAGGCACCGTGGGCTCAAGGATTTaGCCTCAGAGAGGTGGGTGC +
Preference number: 4 (lower is better)
Translates to: VHPCGQHDLYILWHKVGTVGSRI*PQRGGC
Trigger: GCACCCACCTCTCTGAGGGCAAATCCTTGAGCCCAC...GGTGCCTACCTTGTGCCAGAGAATGTACAGATCATGTTGGCCACAAGGATGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR GCA 90 bp GCCGGAGGGAGAGGCTGTGGCTGCTTTCCAGAATGGCACAGCAAACTGCTGTTCTCTCTTCCACTAAAGTaGAAATTCCCTGGGGGTCAA +
Preference number: 4 (lower is better)
Translates to: AGGRGCGCFPEWHSKLLFSLPLK*KFPGGQ
Trigger: TTGACCCCCAGGGAATTTGCACTTTAGTGGAAGAGA...GAACAGCAGTTTGCTGTGCCATTCTGGAAAGCAGCCACAGCCTCTCCCTCCGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR GCA 90 bp CTTGGACATCACTGTGTCTGGAGCTCAGTTTCCCTAGTCTGCCAACAGTCAAGAGGCTCCCAGTGGGAATaGAAGGACGTGATGGGTAGG +
Preference number: 4 (lower is better)
Translates to: LGHHCVWSSVSLVCQQSRGSQWE*KDVMGR
Trigger: CCTACCCATCACGTCCTTGCATTCCCACTGGGAGCC...TCTTGACTGTTGGCAGACTAGGGAAACTGAGCTCCAGACACAGTGATGTCCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR GCA 90 bp CAATCTCAGGGCTTCTTGACTCTCCAGGCCACTCAATTCTGGGCTTGTCTGAGAGGACCGGCTGATAAGTaGAGAGCCTGGGTCTTGCTA +
Preference number: 4 (lower is better)
Translates to: QSQGFLTLQATQFWACLRGPADK*RAWVLL
Trigger: TAGCAAGACCCAGGCTCTGCACTTATCAGCCGGTCC...TCTCAGACAAGCCCAGAATTGAGTGGCCTGGAGAGTCAAGAAGCCCTGAGATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR CCA 90 bp CTTGGACATCACTGTGTCTGGAGCTCAGTTTCCCTAGTCTGCCAACAGTCAAGATCCTTATGGGCCTGGTaGGGTCTGTCCGGGTCATCT +
Preference number: 4 (lower is better)
Translates to: LGHHCVWSSVSLVCQQSRSLWAW*GLSGSS
Trigger: AGATGACCCGGACAGACCCCACCAGGCCCATAAGGA...TCTTGACTGTTGGCAGACTAGGGAAACTGAGCTCCAGACACAGTGATGTCCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR CCA 90 bp GACTTGCTCCTAAGCCCAGACCAAGCTGGACATTGTAGCCAAGGTGTATTCTCTGGGGACCGTGAGCTCTaGGTAGACGTTCTCCAGGTA +
Preference number: 4 (lower is better)
Translates to: DLLLSPDQAGHCSQGVFSGDREL*VDVLQV
Trigger: TACCTGGAGAACGTCTACCCAGAGCTCACGGTCCCC...AGAGAATACACCTTGGCTACAATGTCCAGCTTGGTCTGGGCTTAGGAGCAAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR CCA 90 bp GTTCATCCTTGTGGCCAACATGATCTGTACATTCTCTGGCACAAGGTAGGCACCGGGGACCGTGAGCTCTaGGTAGACGTTCTCCAGGTA +
Preference number: 4 (lower is better)
Translates to: VHPCGQHDLYILWHKVGTGDREL*VDVLQV
Trigger: TACCTGGAGAACGTCTACCCAGAGCTCACGGTCCCC...GGTGCCTACCTTGTGCCAGAGAATGTACAGATCATGTTGGCCACAAGGATGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR CCA 90 bp TTGGCCTATGAAAGACAGGGGGCTCCTGTGGTAGGTATATCTGCCCCAGGCTGGAGGCGCTGGTGCATGTaGACATGTAAGAAGTGGTTT +
Preference number: 4 (lower is better)
Translates to: LAYERQGAPVVGISAPGWRRWCM*TCKKWF
Trigger: AAACCACTTCTTACATGTCCACATGCACCAGCGCCT...CCAGCCTGGGGCAGATATACCTACCACAGGAGCCCCCTGTCTTTCATAGGCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR CCA 90 bp GTGGCTTCAATCCAGAGCAGAGGTTCAGGCCCTTTGGGGATCAGGGACCTCTTTCAAAAGACCCCTGTGTaGGCTTCTGTCCTTGCTTTC +
Preference number: 4 (lower is better)
Translates to: VASIQSRGSGPLGIRDLFQKTPV*ASVLAF
Trigger: GAAAGCAAGGACAGAAGCCCACACAGGGGTCTTTTG...AAAGAGGTCCCTGATCCCCAAAGGGCCTGAACCTCTGCTCTGGATTGAAGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000448469.8
CDS-3UTR CCA 90 bp CACCCCCTAGTGGGAAGCTGCCTTCTTTGTAGGGATGAAGTGTGGGGCCAGCAGACATCTACTATGTGCTaGGTTAAGACTGTGGGCCTA +
Preference number: 4 (lower is better)
Translates to: HPLVGSCLLCRDEVWGQQTSTMC*VKTVGL
Trigger: TAGGCCCACAGTCTTAACCCAGCACATAGTAGATGT...CTGCTGGCCCCACACTTCATCCCTACAAAGAAGGCAGCTTCCCACTAGGGGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR CCA 90 bp CTGCAGGTCACCATAGTTCCTGCCTGGTCCCGACTTTTCTCCTATTGGGGTTTTGCCCTCTGCCTTAGATaGGGCTCTTGTTCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: LQVTIVPAWSRLFSYWGFALCLR*GSCSAG
Trigger: ACCTGCAGAACAAGAGCCCCATCTAAGGCAGAGGGC...AAAACCCCAATAGGAGAAAAGTCGGGACCAGGCAGGAACTATGGTGACCTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR CAA 72 bp GGAATGGAGGCTGCAGCCAAGGTCTTTTACAGTGACTaGCTCCTAAGCCCAGACCAAGCTGGACATTGTAGC +
Preference number: 4 (lower is better)
Translates to: GMEAAAKVFYSD*LLSPDQAGHCS
Trigger: GCTACAATGTCCAGCTTGGTCTGGGCTTAGGAGCAAGTCACTGTAAAAGACCTTGGCTGCAGCCTCCATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337827.8
3UTR CAA 72 bp GGGCTTCTTGACTCTCCAGGCCACTCAATTCTGGGCTaGTCTGAGAAACAATGTCACATCACCCACTGTCCC +
Preference number: 4 (lower is better)
Translates to: GLLDSPGHSILG*SEKQCHITHCP
Trigger: GGGACAGTGGGTGATGTGACATTGTTTCTCAGACAAGCCCAGAATTGAGTGGCCTGGAGAGTCAAGAAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR CAA 72 bp GAGTATGGCCATCCTCACCCCAGGGAGTCGTGGTGCTaGGAGCTACCTCAGCATCTAGCCTTCTGTAATATA +
Preference number: 4 (lower is better)
Translates to: EYGHPHPRESWC*ELPQHLAFCNI
Trigger: TATATTACAGAAGGCTAGATGCTGAGGTAGCTCCAAGCACCACGACTCCCTGGGGTGAGGATGGCCATACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR TCA 90 bp TACGGAAGTGCCTGGGTGGAGGATGGAGTGTTGCTTGGAACATTTATGAGAAGGGGATCTGCTCCCACTTaGAATGCAGGCTCCAGTCGA +
Preference number: 4 (lower is better)
Translates to: YGSAWVEDGVLLGTFMRRGSAPT*NAGSSR
Trigger: TCGACTGGAGCCTGCATTTCAAGTGGGAGCAGATCC...CCTTCTCATAAATGTTCCAAGCAACACTCCATCCTCCACCCAGGCACTTCCGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR TCA 90 bp GTTCATCCTTGTGGCCAACATGATCTGTACATTCTCTGGCACAAGGTAGGCACCAGATTCCTCCAGCTATaGCAGGCGTCCTTATGGGCC +
Preference number: 4 (lower is better)
Translates to: VHPCGQHDLYILWHKVGTRFLQL*QASLWA
Trigger: GGCCCATAAGGACGCCTGTCATAGCTGGAGGAATCT...GGTGCCTACCTTGTGCCAGAGAATGTACAGATCATGTTGGCCACAAGGATGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR TCA 90 bp CTTGGACATCACTGTGTCTGGAGCTCAGTTTCCCTAGTCTGCCAACAGTCAAGAAAAGCAGTGCTCACGTaGGGCTGGTCATGCCAGCTT +
Preference number: 4 (lower is better)
Translates to: LGHHCVWSSVSLVCQQSRKAVLT*GWSCQL
Trigger: AAGCTGGCATGACCAGCCTCACGTGAGCACTGCTTT...TCTTGACTGTTGGCAGACTAGGGAAACTGAGCTCCAGACACAGTGATGTCCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR TCA 90 bp CACCCCCTAGTGGGAAGCTGCCTTCTTTGTAGGGATGAAGTGTGGGGCCAGCAGAAGGTAGGCACCCAGTaGCATTTTGTTTGTTTGAGA +
Preference number: 4 (lower is better)
Translates to: HPLVGSCLLCRDEVWGQQKVGTQ*HFVCLR
Trigger: TCTCAAACAAACAAAATGTCACTGGGTGCCTACCTT...CTGCTGGCCCCACACTTCATCCCTACAAAGAAGGCAGCTTCCCACTAGGGGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR GCA 90 bp GCAGGGTGTGGGGATAGCAGGAGCAGTTCCAAGACAAGGCCGTGGGGTAGATGTAAGGTCAGCAGATGCTaGAAGGTAGGCAAAATTATC +
Preference number: 4 (lower is better)
Translates to: AGCGDSRSSSKTRPWGRCKVSRC*KVGKII
Trigger: GATAATTTTGCCTACCTTGCAGCATCTGCTGACCTT...ACATCTACCCCACGGCCTTGTCTTGGAACTGCTCCTGCTATCCCCACACCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR GCA 90 bp CAATCTCAGGGCTTCTTGACTCTCCAGGCCACTCAATTCTGGGCTTGTCTGAGATCTTGGCAGACCCTCTaGAGATCCCCATTCCAAGCA +
Preference number: 4 (lower is better)
Translates to: QSQGFLTLQATQFWACLRSWQTL*RSPFQA
Trigger: TGCTTGGAATGGGGATCTGCAGAGGGTCTGCCAAGA...TCTCAGACAAGCCCAGAATTGAGTGGCCTGGAGAGTCAAGAAGCCCTGAGATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR GCA 90 bp ACATGTAAGAAGTGGTTTTATTCCAGGTGTGTGTTTCATAAAGACGAGGTCCTCGGCAACAGCTGCCACTaGTGGGCCTGGGCGTCAGCC +
Preference number: 4 (lower is better)
Translates to: TCKKWFYSRCVFHKDEVLGNSCH*WAWASA
Trigger: GGCTGACGCCCAGGCCCAGCAGTGGCAGCTGTTGCC...GAGGACCTCGTCTTTATGAAACACACACCTGGAATAAAACCACTTCTTACATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR GCA 90 bp CAATCTCAGGGCTTCTTGACTCTCCAGGCCACTCAATTCTGGGCTTGTCTGAGACTATTTGCCTCCCATTaGAACCACCTCCCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: QSQGFLTLQATQFWACLRLFASH*NHLPSS
Trigger: GGAAGAGGGGAGGTGGTTGCAATGGGAGGCAAATAG...TCTCAGACAAGCCCAGAATTGAGTGGCCTGGAGAGTCAAGAAGCCCTGAGATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR CCA 90 bp ACATGTAAGAAGTGGTTTTATTCCAGGTGTGTGTTTCATAAAGACGAGGTCCTCCGAAGGCCTTCCCGATaGCCGAGGGCCGGGCCTCAT +
Preference number: 4 (lower is better)
Translates to: TCKKWFYSRCVFHKDEVLRRPSR*PRAGPH
Trigger: ATGAGGCCCGGCCCTCGGCCATCGGGAAGGCCTTCG...GAGGACCTCGTCTTTATGAAACACACACCTGGAATAAAACCACTTCTTACATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337827.8
ENST00000448469.8
ENST00000553471.6
CDS-3UTR CCA 90 bp GACTTGCTCCTAAGCCCAGACCAAGCTGGACATTGTAGCCAAGGTGTATTCTCTCGTGGGGTAGATGTGTaGATGTGTTCTCAGCGGCTG +
Preference number: 4 (lower is better)
Translates to: DLLLSPDQAGHCSQGVFSRGVDV*MCSQRL
Trigger: CAGCCGCTGAGAACACATCCACACATCTACCCCACG...AGAGAATACACCTTGGCTACAATGTCCAGCTTGGTCTGGGCTTAGGAGCAAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR CCA 90 bp TTGCTGTTTTTACCCAGGAAGTATGTCCTGCCTGAATTTGTACCACTGCCTTCTCGGACCACAGACACTTaGCTGCTGACCCCAAGGGCC +
Preference number: 4 (lower is better)
Translates to: LLFLPRKYVLPEFVPLPSRTTDT*LLTPRA
Trigger: GGCCCTTGGGGTCAGCAGCCAAGTGTCTGTGGTCCG...AGAAGGCAGTGGTACAAATTCAGGCAGGACATACTTCCTGGGTAAAAACAGCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR CCA 90 bp TTGCTGTTTTTACCCAGGAAGTATGTCCTGCCTGAATTTGTACCACTGCCTTCTCAGGCCTTGGGGTGCTaGAACCCTGGGACGACAGTC +
Preference number: 4 (lower is better)
Translates to: LLFLPRKYVLPEFVPLPSQALGC*NPGTTV
Trigger: GACTGTCGTCCCAGGGTTCCAGCACCCCAAGGCCTG...AGAAGGCAGTGGTACAAATTCAGGCAGGACATACTTCCTGGGTAAAAACAGCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR CCA 90 bp GTTCATCCTTGTGGCCAACATGATCTGTACATTCTCTGGCACAAGGTAGGCACCACCCACGTCACTGGGTaGCTGGGAGGATTAGATGAG +
Preference number: 4 (lower is better)
Translates to: VHPCGQHDLYILWHKVGTTHVTG*LGGLDE
Trigger: CTCATCTAATCCTCCCAGCCACCCAGTGACGTGGGT...GGTGCCTACCTTGTGCCAGAGAATGTACAGATCATGTTGGCCACAAGGATGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR TCA 90 bp AATTGTCCTCAGATGGCTCTGGAGCCTCAGTCCAGGTCGGCTACTCAGACAGCCAGTCATCCACTAAAATaGTCTCCTGGATCAAGTTGG +
Preference number: 4 (lower is better)
Translates to: NCPQMALEPQSRSATQTASHPLK*SPGSSW
Trigger: CCAACTTGATCCAGGAGATCATTTTAGTGGATGACT...GGCTGTCTGAGTAGCCGACCTGGACTGAGGCTCCAGAGCCATCTGAGGACAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR TCA 90 bp TGGAGTCTGTTTAATAAACTACGCCCGAATCTTCCCCTAAAGATCCCTCTGCAGCATTGCGCAGGCACTTaGCCTTGGGGATCCTGGTCA +
Preference number: 4 (lower is better)
Translates to: WSLFNKLRPNLPLKIPLQHCAGT*PWGSWS
Trigger: TGACCAGGATCCCCAAGGTCAAGTGCCTGCGCAATG...CTGCAGAGGGATCTTTAGGGGAAGATTCGGGCGTAGTTTATTAAACAGACTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448469.8
CDS-3UTR TCA 90 bp ACATGTAAGAAGTGGTTTTATTCCAGGTGTGTGTTTCATAAAGACGAGGTCCTCGTGGGCTGTGCTCCCTaGGAGGACGGAGGGGTGGAT +
Preference number: 4 (lower is better)
Translates to: TCKKWFYSRCVFHKDEVLVGCAP*EDGGVD
Trigger: ATCCACCCCTCCGTCCTCTCAGGGAGCACAGCCCAC...GAGGACCTCGTCTTTATGAAACACACACCTGGAATAAAACCACTTCTTACATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR TCA 90 bp GTGGCTTCAATCCAGAGCAGAGGTTCAGGCCCTTTGGGGATCAGGGACCTCTTTAGCAGGAGTCAAAAATaGCAAATGAGGCTGGGACTA +
Preference number: 4 (lower is better)
Translates to: VASIQSRGSGPLGIRDLFSRSQK*QMRLGL
Trigger: TAGTCCCAGCCTCATTTGTCATTTTTGACTCCTGCT...AAAGAGGTCCCTGATCCCCAAAGGGCCTGAACCTCTGCTCTGGATTGAAGCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448469.8
CDS-3UTR TCA 90 bp CTGCAGGTCACCATAGTTCCTGCCTGGTCCCGACTTTTCTCCTATTGGGGTTTTTCTGAAGGGCTTATTTaGGTCAATCAGGGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: LQVTIVPAWSRLFSYWGFSEGLI*VNQGLS
Trigger: GGAGAGCCCCTGATTGACTCAAATAAGCCCTTCAGA...AAAACCCCAATAGGAGAAAAGTCGGGACCAGGCAGGAACTATGGTGACCTGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR GCA 90 bp TCCATCACACCAGGTCTGAGGCACAGGAGCCTCTCGGATACAGGAAACCCAGCTAAGGTCAGCAGATGCTaGAAGGTAGGCAAAATTATC +
Preference number: 4 (lower is better)
Translates to: SITPGLRHRSLSDTGNPAKVSRC*KVGKII
Trigger: GATAATTTTGCCTACCTTGCAGCATCTGCTGACCTT...AGCTGGGTTTCCTGTATCCGAGAGGCTCCTGTGCCTCAGACCTGGTGTGATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR GCA 90 bp GTGGCTTCAATCCAGAGCAGAGGTTCAGGCCCTTTGGGGATCAGGGACCTCTTTACGAAGGTCAGCAGATaGTGCAAGGTAGGCAAAATT +
Preference number: 4 (lower is better)
Translates to: VASIQSRGSGPLGIRDLFTKVSR*CKVGKI
Trigger: AATTTTGCCTACCTTGCAGCATCTGCTGACCTTCGT...AAAGAGGTCCCTGATCCCCAAAGGGCCTGAACCTCTGCTCTGGATTGAAGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR GCA 90 bp GTGGCTTCAATCCAGAGCAGAGGTTCAGGCCCTTTGGGGATCAGGGACCTCTTTATCCATCCACACTTCTaGAGTGCGCTTAGTATTCCT +
Preference number: 4 (lower is better)
Translates to: VASIQSRGSGPLGIRDLFIHPHF*SALSIP
Trigger: AGGAATACTAAGCGCACTGCAGAAGTGTGGATGGAT...AAAGAGGTCCCTGATCCCCAAAGGGCCTGAACCTCTGCTCTGGATTGAAGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR GCA 90 bp AGGACAGGGCTAGACTTGAGCATGTTCAGTTTCACTTTTACAGAAAGGAGGCCCGAGGCTGCACCTGGCTaGGGAAGAAACATCACGACA +
Preference number: 4 (lower is better)
Translates to: RTGLDLSMFSFTFTERRPEAAPG*GRNITT
Trigger: TGTCGTGATGTTTCTTCCGCAGCCAGGTGCAGCCTC...GGGCCTCCTTTCTGTAAAAGTGAAACTGAACATGCTCAAGTCTAGCCCTGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR GCA 90 bp AGGCTGAGAGATGAAATAACTTATTCAAGAGCTCAGTCAGGCGCAGTGGCTCACAGAACAGGGCTGCGTTaGCACAAAGGACCGGCTGAT +
Preference number: 4 (lower is better)
Translates to: RLRDEITYSRAQSGAVAHRTGLR*HKGPAD
Trigger: ATCAGCCGGTCCTTTGTGGCAACGCAGCCCTGTTCT...GTGAGCCACTGCGCCTGACTGAGCTCTTGAATAAGTTATTTCATCTCTCAGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR GCA 90 bp GCAGGGTGTGGGGATAGCAGGAGCAGTTCCAAGACAAGGCCGTGGGGTAGATGTTTTGGAGAAGCAATTTaGTTTCCATTTCTAAGCCCC +
Preference number: 4 (lower is better)
Translates to: AGCGDSRSSSKTRPWGRCFGEAI*FPFLSP
Trigger: GGGGCTTAGAAATGGAAAGCAAATTGCTTCTCCAAA...ACATCTACCCCACGGCCTTGTCTTGGAACTGCTCCTGCTATCCCCACACCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR GCA 90 bp TACGGAAGTGCCTGGGTGGAGGATGGAGTGTTGCTTGGAACATTTATGAGAAGGTCCTATGTAAGAGGCTaGCCCCATCCTGCCTCTAAC +
Preference number: 4 (lower is better)
Translates to: YGSAWVEDGVLLGTFMRRSYVRG*PHPASN
Trigger: GTTAGAGGCAGGATGGGGGCAGCCTCTTACATAGGA...CCTTCTCATAAATGTTCCAAGCAACACTCCATCCTCCACCCAGGCACTTCCGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR CCA 90 bp TTTTTACCCAGGAAGTATGTCCTGCCTGAATTTGTACCACTGCCTTCTTGTGTGCTGTGCGCAGCAGGGTaGAACGGGCCTCATTGTGGA +
Preference number: 4 (lower is better)
Translates to: FLPRKYVLPEFVPLPSCVLCAAG*NGPHCG
Trigger: TCCACAATGAGGCCCGTTCCACCCTGCTGCGCACAG...CACACAAGAAGGCAGTGGTACAAATTCAGGCAGGACATACTTCCTGGGTAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR CCA 90 bp CCTGGCTGCGGAAGAAACATCACGACAGAGGACAGGCAAAGCATGGCCCTGGGAAGGGCAATACCTATTTaGAGAAGCAATTTGCTTTCC +
Preference number: 4 (lower is better)
Translates to: PGCGRNITTEDRQSMALGRAIPI*RSNLLS
Trigger: GGAAAGCAAATTGCTTCTCCAAATAGGTATTGCCCT...TCCCAGGGCCATGCTTTGCCTGTCCTCTGTCGTGATGTTTCTTCCGCAGCCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR CCA 90 bp AGGACAGGGCTAGACTTGAGCATGTTCAGTTTCACTTTTACAGAAAGGAGGCCCTCCCTGCTGTACAAATaGGAGTCTGGCCCTGGTGCA +
Preference number: 4 (lower is better)
Translates to: RTGLDLSMFSFTFTERRPSLLYK*ESGPGA
Trigger: TGCACCAGGGCCAGACTCCCATTTGTACAGCAGGGA...GGGCCTCCTTTCTGTAAAAGTGAAACTGAACATGCTCAAGTCTAGCCCTGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR CCA 90 bp ACATGTAAGAAGTGGTTTTATTCCAGGTGTGTGTTTCATAAAGACGAGGTCCTCATCCCCCGCAGGCCTTaGGGTGCTGGAACCCTGGGA +
Preference number: 4 (lower is better)
Translates to: TCKKWFYSRCVFHKDEVLIPRRP*GAGTLG
Trigger: TCCCAGGGTTCCAGCACCCCAAGGCCTGCGGGGGAT...GAGGACCTCGTCTTTATGAAACACACACCTGGAATAAAACCACTTCTTACATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR CCA 90 bp GAGAGGTCTCAGCCTGACACATGGCCAAATAGAAGTGGAGTCTGTTTAATAAACTACCCGTCCTTTCAGTaGGTCCTGGCGGCAGGGACA +
Preference number: 4 (lower is better)
Translates to: ERSQPDTWPNRSGVCLINYPSFQ*VLAAGT
Trigger: TGTCCCTGCCGCCAGGACCCACTGAAAGGACGGGTA...GTTTATTAAACAGACTCCACTTCTATTTGGCCATGTGTCAGGCTGAGACCTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448469.8
CDS-3UTR CCA 90 bp CTGCAGGTCACCATAGTTCCTGCCTGGTCCCGACTTTTCTCCTATTGGGGTTTTAGAGGGGCAATTGAGTaGAGGCTTTGCTCGGAGATA +
Preference number: 4 (lower is better)
Translates to: LQVTIVPAWSRLFSYWGFRGAIE*RLCSEI
Trigger: TATCTCCGAGCAAAGCCTCCACTCAATTGCCCCTCT...AAAACCCCAATAGGAGAAAAGTCGGGACCAGGCAGGAACTATGGTGACCTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR CCA 90 bp GGCCCGGATTCCAGAAGGCATTGGCAGTGGGATAGCTGGCTCATCCTGTCCTCCATTTACAATTTAGCTTaGTTGCCACGTGCAAATCTG +
Preference number: 4 (lower is better)
Translates to: GPDSRRHWQWDSWLILSSIYNLA*LPRANL
Trigger: CAGATTTGCACGTGGCAACCAAGCTAAATTGTAAAT...GGAGGACAGGATGAGCCAGCTATCCCACTGCCAATGCCTTCTGGAATCCGGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR CCA 90 bp CAAATTCCCTGGGGGTCAAGGACCATGTCCGTTCATCCTTGTGGCCAACATGATGATAAGTGCAGAGCCTaGGTCTTGCTATGTTGCCCA +
Preference number: 4 (lower is better)
Translates to: QIPWGSRTMSVHPCGQHDDKCRA*VLLCCP
Trigger: TGGGCAACATAGCAAGACCCAGGCTCTGCACTTATC...ATCATGTTGGCCACAAGGATGAACGGACATGGTCCTTGACCCCCAGGGAATTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR TCA 90 bp CTGTTTAATAAACTACGCCCGAATCTTCCCCTAAAGATCCCTCTGCAGCCTCTTGGATCTGCTCCCACTTaGAATGCAGGCTCCAGTCGA +
Preference number: 4 (lower is better)
Translates to: LFNKLRPNLPLKIPLQPLGSAPT*NAGSSR
Trigger: TCGACTGGAGCCTGCATTTCAAGTGGGAGCAGATCC...AAGAGGCTGCAGAGGGATCTTTAGGGGAAGATTCGGGCGTAGTTTATTAAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448469.8
CDS-3UTR TCA 90 bp ACATGTAAGAAGTGGTTTTATTCCAGGTGTGTGTTTCATAAAGACGAGGTCCTCCAAGAGCCAGTGGGGTaGGGAAGCAGGGTGTGGGGA +
Preference number: 4 (lower is better)
Translates to: TCKKWFYSRCVFHKDEVLQEPVG*GSRVWG
Trigger: TCCCCACACCCTGCTTCCTCACCCCACTGGCTCTTG...GAGGACCTCGTCTTTATGAAACACACACCTGGAATAAAACCACTTCTTACATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR TCA 90 bp CAGGGCTGCGTTGCCACAAAGGACCGGCTGATAAGTGCAGAGCCTGATCTGACCATCAAGGCTGAGAGATaGAATAACTTATTCAAGAGC +
Preference number: 4 (lower is better)
Translates to: QGCVATKDRLISAEPDLTIKAER*NNLFKS
Trigger: GCTCTTGAATAAGTTATTTCATCTCTCAGCCTTGAT...GGTCAGATCAGGCTCTGCACTTATCAGCCGGTCCTTTGTGGCAACGCAGCCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR TCA 90 bp ACATGTAAGAAGTGGTTTTATTCCAGGTGTGTGTTTCATAAAGACGAGGTCCTCACTGCTTGCACCGACTaGGGCAGGCTAGCCAGTGGC +
Preference number: 4 (lower is better)
Translates to: TCKKWFYSRCVFHKDEVLTACTD*GRLASG
Trigger: GCCACTGGCTAGCCTGCCTCAGTCGGTGCAAGCAGT...GAGGACCTCGTCTTTATGAAACACACACCTGGAATAAAACCACTTCTTACATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR GCA 90 bp TTCTTTTGGTGCTTTGCTGCTCTTCTATCCATGTTCATTTGCAAATTACCCATCGGTGAGAACGGTAGCTaGAGCCACGTCCGCCCCACG +
Preference number: 4 (lower is better)
Translates to: FFWCFAALLSMFICKLPIGENGS*SHVRPT
Trigger: CGTGGGGCGGACGTGGCTGCAGCTACCGTTCTCACC...GATGGGTAATTTGCAAATGAACATGGATAGAAGAGCAGCAAAGCACCAAAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448469.8
CDS-3UTR GCA 90 bp GACTTGCTCCTAAGCCCAGACCAAGCTGGACATTGTAGCCAAGGTGTATTCTCTTGTGGTAGGTATATCTaGCCCAGGCTGGTCTGCTTT +
Preference number: 4 (lower is better)
Translates to: DLLLSPDQAGHCSQGVFSCGRYI*PRLVCF
Trigger: AAAGCAGACCAGCCTGGGGCAGATATACCTACCACA...AGAGAATACACCTTGGCTACAATGTCCAGCTTGGTCTGGGCTTAGGAGCAAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR GCA 90 bp TTGCTGTTTTTACCCAGGAAGTATGTCCTGCCTGAATTTGTACCACTGCCTTCTTTTTGGTCCAAGGCCTaGCCTTGCAGTAGGGCCACC +
Preference number: 4 (lower is better)
Translates to: LLFLPRKYVLPEFVPLPSFWSKA*PCSRAT
Trigger: GGTGGCCCTACTGCAAGGGCAGGCCTTGGACCAAAA...AGAAGGCAGTGGTACAAATTCAGGCAGGACATACTTCCTGGGTAAAAACAGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR GCA 90 bp CAAATTCCCTGGGGGTCAAGGACCATGTCCGTTCATCCTTGTGGCCAACATGATCAATGGAAAAAGCAGTaGTCACGTGAGGCTGGTCAT +
Preference number: 4 (lower is better)
Translates to: QIPWGSRTMSVHPCGQHDQWKKQ*SREAGH
Trigger: ATGACCAGCCTCACGTGAGCACTGCTTTTTCCATTG...ATCATGTTGGCCACAAGGATGAACGGACATGGTCCTTGACCCCCAGGGAATTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR CCA 90 bp CTGCAGGTCACCATAGTTCCTGCCTGGTCCCGACTTTTCTCCTATTGGGGTTTTGTGTTCACTTCGCAGTaGCTATCCAGAAAGGTGAGA +
Preference number: 4 (lower is better)
Translates to: LQVTIVPAWSRLFSYWGFVFTSQ*LSRKVR
Trigger: TCTCACCTTTCTGGATAGCCACTGCGAAGTGAACAC...AAAACCCCAATAGGAGAAAAGTCGGGACCAGGCAGGAACTATGGTGACCTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR CCA 90 bp GGCTCTTGCTTTTCTGTAGTTTGCAGAAGTTCCTGTCCAGATCAGAGGAGGAGGCCCCAGATGTCCATCTaGGCATCATACTTTCCCAAG +
Preference number: 4 (lower is better)
Translates to: GSCFSVVCRSSCPDQRRRPQMSI*ASYFPK
Trigger: CTTGGGAAAGTATGATGCCCAGATGGACATCTGGGG...CCTCCTCCTCTGATCTGGACAGGAACTTCTGCAAACTACAGAAAAGCAAGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR CCA 90 bp AGGACAGGGCTAGACTTGAGCATGTTCAGTTTCACTTTTACAGAAAGGAGGCCCTCCAAGACAAGGCCGTaGGGTAGATGTGTGGATGTG +
Preference number: 4 (lower is better)
Translates to: RTGLDLSMFSFTFTERRPSKTRP*GRCVDV
Trigger: CACATCCACACATCTACCCCACGGCCTTGTCTTGGA...GGGCCTCCTTTCTGTAAAAGTGAAACTGAACATGCTCAAGTCTAGCCCTGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR CCA 90 bp TTGCTGTTTTTACCCAGGAAGTATGTCCTGCCTGAATTTGTACCACTGCCTTCTGAGAGGCCTTTGCCCTaGGCCCAGTTCTGTCCTAAG +
Preference number: 4 (lower is better)
Translates to: LLFLPRKYVLPEFVPLPSERPLP*AQFCPK
Trigger: CTTAGGACAGAACTGGGCCCAGGGCAAAGGCCTCTC...AGAAGGCAGTGGTACAAATTCAGGCAGGACATACTTCCTGGGTAAAAACAGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR CCA 90 bp GAGAGGTCTCAGCCTGACACATGGCCAAATAGAAGTGGAGTCTGTTTAATAAACGAGAGGCCTTTGCCCTaGGCCCAGTTCTGTCCTAAG +
Preference number: 4 (lower is better)
Translates to: ERSQPDTWPNRSGVCLINERPLP*AQFCPK
Trigger: CTTAGGACAGAACTGGGCCCAGGGCAAAGGCCTCTC...GTTTATTAAACAGACTCCACTTCTATTTGGCCATGTGTCAGGCTGAGACCTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448469.8
CDS-3UTR CCA 90 bp CAAATTCCCTGGGGGTCAAGGACCATGTCCGTTCATCCTTGTGGCCAACATGATTTAGTGGTGACAGTGTaGGTGAGAGTGTCGGATCAA +
Preference number: 4 (lower is better)
Translates to: QIPWGSRTMSVHPCGQHDLVVTV*VRVSDQ
Trigger: TTGATCCGACACTCTCACCCACACTGTCACCACTAA...ATCATGTTGGCCACAAGGATGAACGGACATGGTCCTTGACCCCCAGGGAATTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR CCA 90 bp GTTCATCCTTGTGGCCAACATGATCTGTACATTCTCTGGCACAAGGTAGGCACCTGCCTGGGTGGAGGATaGAGTGTTGCTTGGAACATT +
Preference number: 4 (lower is better)
Translates to: VHPCGQHDLYILWHKVGTCLGGG*SVAWNI
Trigger: AATGTTCCAAGCAACACTCCATCCTCCACCCAGGCA...GGTGCCTACCTTGTGCCAGAGAATGTACAGATCATGTTGGCCACAAGGATGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR CCA 90 bp GTTCATCCTTGTGGCCAACATGATCTGTACATTCTCTGGCACAAGGTAGGCACCACCCAGTTTCTTACATaGCATCAGTTGCTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: VHPCGQHDLYILWHKVGTTQFLT*HQLLGL
Trigger: CAGCCCCAGCAACTGATGCCATGTAAGAAACTGGGT...GGTGCCTACCTTGTGCCAGAGAATGTACAGATCATGTTGGCCACAAGGATGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR CAA 72 bp GACGAGCAAGCTACCAGGTGCAGGACAGGGCTAGACTaGAGCATGTTCAGTTTCACTTTTACAGAAAGGAGG +
Preference number: 4 (lower is better)
Translates to: DEQATRCRTGLD*SMFSFTFTERR
Trigger: CCTCCTTTCTGTAAAAGTGAAACTGAACATGCTCAAGTCTAGCCCTGTCCTGCACCTGGTAGCTTGCTCGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR TCA 90 bp ACATGTAAGAAGTGGTTTTATTCCAGGTGTGTGTTTCATAAAGACGAGGTCCTCCAGGCGATGGCAGTTTaGGCACGCCAGGGAGGAAGA +
Preference number: 4 (lower is better)
Translates to: TCKKWFYSRCVFHKDEVLQAMAV*ARQGGR
Trigger: TCTTCCTCCCTGGCGTGCTCAAACTGCCATCGCCTG...GAGGACCTCGTCTTTATGAAACACACACCTGGAATAAAACCACTTCTTACATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR TCA 90 bp TTGCTGTTTTTACCCAGGAAGTATGTCCTGCCTGAATTTGTACCACTGCCTTCTGTGCAGAGCCTGATCTaGCCACAGCAAAGGACAGAG +
Preference number: 4 (lower is better)
Translates to: LLFLPRKYVLPEFVPLPSVQSLI*PQQRTE
Trigger: CTCTGTCCTTTGCTGTGGTCAGATCAGGCTCTGCAC...AGAAGGCAGTGGTACAAATTCAGGCAGGACATACTTCCTGGGTAAAAACAGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR TCA 90 bp TTGCTGTTTTTACCCAGGAAGTATGTCCTGCCTGAATTTGTACCACTGCCTTCTCTTCTGGAGGAGCACTaGCTCAGACCATCACAGGGA +
Preference number: 4 (lower is better)
Translates to: LLFLPRKYVLPEFVPLPSLLEEH*LRPSQG
Trigger: TCCCTGTGATGGTCTGAGTCAGTGCTCCTCCAGAAG...AGAAGGCAGTGGTACAAATTCAGGCAGGACATACTTCCTGGGTAAAAACAGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR TCA 90 bp GCCCTCTGCCTTAGATGGGGCTCTTGTTCTGCAGGTCACCATAGTTCCTGCCTGCTCAGCTGTGTGATCTaGCATATATTCTTTAGATTC +
Preference number: 4 (lower is better)
Translates to: ALCLRWGSCSAGHHSSCLLSCVI*HIFFRF
Trigger: GAATCTAAAGAATATATGTCAGATCACACAGCTGAG...CAGGCAGGAACTATGGTGACCTGCAGAACAAGAGCCCCATCTAAGGCAGAGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR TCA 90 bp ACATGTAAGAAGTGGTTTTATTCCAGGTGTGTGTTTCATAAAGACGAGGTCCTCGGGAATGCAAGGACGTaGTGGGTAGGGCTGAGACCC +
Preference number: 4 (lower is better)
Translates to: TCKKWFYSRCVFHKDEVLGNART*WVGLRP
Trigger: GGGTCTCAGCCCTACCCATCACGTCCTTGCATTCCC...GAGGACCTCGTCTTTATGAAACACACACCTGGAATAAAACCACTTCTTACATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR TCA 90 bp GTTCATCCTTGTGGCCAACATGATCTGTACATTCTCTGGCACAAGGTAGGCACCTTCTTCCTAAGCTTCTaGCCTGTGAGGCCAGTAATC +
Preference number: 4 (lower is better)
Translates to: VHPCGQHDLYILWHKVGTFFLSF*PVRPVI
Trigger: GATTACTGGCCTCACAGGTCAGAAGCTTAGGAAGAA...GGTGCCTACCTTGTGCCAGAGAATGTACAGATCATGTTGGCCACAAGGATGAAC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR GCA 90 bp AGGCTGAGAGATGAAATAACTTATTCAAGAGCTCAGTCAGGCGCAGTGGCTCACCTAGCTGCTCAGTCCTaGAGAGCAGAAAAAGGAGAG +
Preference number: 4 (lower is better)
Translates to: RLRDEITYSRAQSGAVAHLAAQS*RAEKGE
Trigger: CTCTCCTTTTTCTGCTCTGCAGGACTGAGCAGCTAG...GTGAGCCACTGCGCCTGACTGAGCTCTTGAATAAGTTATTTCATCTCTCAGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR GCA 90 bp CTGCAGGTCACCATAGTTCCTGCCTGGTCCCGACTTTTCTCCTATTGGGGTTTTACGAAGGTCAGCAGATaGTGCAAGGTAGGCAAAATT +
Preference number: 4 (lower is better)
Translates to: LQVTIVPAWSRLFSYWGFTKVSR*CKVGKI
Trigger: AATTTTGCCTACCTTGCAGCATCTGCTGACCTTCGT...AAAACCCCAATAGGAGAAAAGTCGGGACCAGGCAGGAACTATGGTGACCTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR GCA 90 bp TCTGCTACCCAATCAAGCAAAGCTGGTCTGGTAAGACTCTTTTCAGAATTATTTGTCACTGAACAGCCATaGCTGGGCGGGCTGCGGGTT +
Preference number: 4 (lower is better)
Translates to: SATQSSKAGLVRLFSELFVTEQP*LGGLRV
Trigger: AACCCGCAGCCCGCCCAGGCATGGCTGTTCAGTGAC...AAATAATTCTGAAAAGAGTCTTACCAGACCAGCTTTGCTTGATTGGGTAGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR GCA 90 bp ACATGTAAGAAGTGGTTTTATTCCAGGTGTGTGTTTCATAAAGACGAGGTCCTCGCCCTCCAGAGCAGGTaGTGCGGACCACAGACACTT +
Preference number: 4 (lower is better)
Translates to: TCKKWFYSRCVFHKDEVLALQSR*CGPQTL
Trigger: AAGTGTCTGTGGTCCGCAGCACCTGCTCTGGAGGGC...GAGGACCTCGTCTTTATGAAACACACACCTGGAATAAAACCACTTCTTACATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR GCA 90 bp ACATGTAAGAAGTGGTTTTATTCCAGGTGTGTGTTTCATAAAGACGAGGTCCTCGGTGGGTGCTCTAGGTaGAGGAGACACTGCACCAGC +
Preference number: 4 (lower is better)
Translates to: TCKKWFYSRCVFHKDEVLGGCSR*RRHCTS
Trigger: GCTGGTGCAGTGTCTCCTGCACCTAGAGCACCCACC...GAGGACCTCGTCTTTATGAAACACACACCTGGAATAAAACCACTTCTTACATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR GCA 90 bp CTGCAGGTCACCATAGTTCCTGCCTGGTCCCGACTTTTCTCCTATTGGGGTTTTATTGAGTGGAGGCTTTaGTCGGAGATAATTCCTCAG +
Preference number: 4 (lower is better)
Translates to: LQVTIVPAWSRLFSYWGFIEWRL*SEIIPQ
Trigger: CTGAGGAATTATCTCCGAGCAAAGCCTCCACTCAAT...AAAACCCCAATAGGAGAAAAGTCGGGACCAGGCAGGAACTATGGTGACCTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR GCA 90 bp CTTGGACATCACTGTGTCTGGAGCTCAGTTTCCCTAGTCTGCCAACAGTCAAGACCAATCATTAGGAAGTaGTCCCCAAACAGCGGGATT +
Preference number: 4 (lower is better)
Translates to: LGHHCVWSSVSLVCQQSRPIIRK*SPNSGI
Trigger: AATCCCGCTGTTTGGGGAGCACTTCCTAATGATTGG...TCTTGACTGTTGGCAGACTAGGGAAACTGAGCTCCAGACACAGTGATGTCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR GCA 90 bp CTTGGACATCACTGTGTCTGGAGCTCAGTTTCCCTAGTCTGCCAACAGTCAAGAGGTTTCTCTCCTATTTaGCTCCCATTGCAACCACCT +
Preference number: 4 (lower is better)
Translates to: LGHHCVWSSVSLVCQQSRGFSPI*LPLQPP
Trigger: AGGTGGTTGCAATGGGAGGCAAATAGGAGAGAAACC...TCTTGACTGTTGGCAGACTAGGGAAACTGAGCTCCAGACACAGTGATGTCCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR GCA 90 bp TACGGAAGTGCCTGGGTGGAGGATGGAGTGTTGCTTGGAACATTTATGAGAAGGAAGGGGGAGAAGAGTTaGTCCTGTAGAACATTACGG +
Preference number: 4 (lower is better)
Translates to: YGSAWVEDGVLLGTFMRRKGEKS*SCRTLR
Trigger: CCGTAATGTTCTACAGGAGCAACTCTTCTCCCCCTT...CCTTCTCATAAATGTTCCAAGCAACACTCCATCCTCCACCCAGGCACTTCCGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR GCA 90 bp CTTGGACATCACTGTGTCTGGAGCTCAGTTTCCCTAGTCTGCCAACAGTCAAGAAGCTTGGTTGCCACGTaGAAATCTGCATTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: LGHHCVWSSVSLVCQQSRSLVAT*KSAFPA
Trigger: AGCTGGAAATGCAGATTTGCACGTGGCAACCAAGCT...TCTTGACTGTTGGCAGACTAGGGAAACTGAGCTCCAGACACAGTGATGTCCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR CCA 90 bp CTGTTTAATAAACTACGCCCGAATCTTCCCCTAAAGATCCCTCTGCAGCCTCTTTTGTCACTCTCCAGCTaGTTGAAGGCGTGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: LFNKLRPNLPLKIPLQPLLSLSS*LKACCL
Trigger: CAGACAGCACGCCTTCAACCAGCTGGAGAGTGACAA...AAGAGGCTGCAGAGGGATCTTTAGGGGAAGATTCGGGCGTAGTTTATTAAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448469.8
CDS-3UTR CCA 90 bp GTGGCTTCAATCCAGAGCAGAGGTTCAGGCCCTTTGGGGATCAGGGACCTCTTTACTAAAATGATCTCCTaGATCAAGTTGGCAGGAGTT +
Preference number: 4 (lower is better)
Translates to: VASIQSRGSGPLGIRDLFTKMIS*IKLAGV
Trigger: AACTCCTGCCAACTTGATCCAGGAGATCATTTTAGT...AAAGAGGTCCCTGATCCCCAAAGGGCCTGAACCTCTGCTCTGGATTGAAGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR CCA 90 bp CTGCAGGTCACCATAGTTCCTGCCTGGTCCCGACTTTTCTCCTATTGGGGTTTTCACTTATTTGAACTGTaGTGGTTGTCAGGAGCTAGG +
Preference number: 4 (lower is better)
Translates to: LQVTIVPAWSRLFSYWGFHLFEL*WLSGAR
Trigger: CCTAGCTCCTGACAACCACCACAGTTCAAATAAGTG...AAAACCCCAATAGGAGAAAAGTCGGGACCAGGCAGGAACTATGGTGACCTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR CCA 90 bp GTTCATCCTTGTGGCCAACATGATCTGTACATTCTCTGGCACAAGGTAGGCACCCAGAAGAGAGCTGGCTaGATTCTGGAAATCCACTGT +
Preference number: 4 (lower is better)
Translates to: VHPCGQHDLYILWHKVGTQKRAG*ILEIHC
Trigger: ACAGTGGATTTCCAGAATCCAGCCAGCTCTCTTCTG...GGTGCCTACCTTGTGCCAGAGAATGTACAGATCATGTTGGCCACAAGGATGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR CCA 90 bp GTTCATCCTTGTGGCCAACATGATCTGTACATTCTCTGGCACAAGGTAGGCACCCCCATCTCCACATCTTaGTTCTTGCGGATTCCTTGT +
Preference number: 4 (lower is better)
Translates to: VHPCGQHDLYILWHKVGTPISTS*FLRIPC
Trigger: ACAAGGAATCCGCAAGAACCAAGATGTGGAGATGGG...GGTGCCTACCTTGTGCCAGAGAATGTACAGATCATGTTGGCCACAAGGATGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR CCA 90 bp ACATGTAAGAAGTGGTTTTATTCCAGGTGTGTGTTTCATAAAGACGAGGTCCTCTGTAGGGATGAAGTGTaGGGCCAGCAGGGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: TCKKWFYSRCVFHKDEVLCRDEV*GQQGGG
Trigger: CCCACCACCCTGCTGGCCCCACACTTCATCCCTACA...GAGGACCTCGTCTTTATGAAACACACACCTGGAATAAAACCACTTCTTACATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR TCA 90 bp ACATGTAAGAAGTGGTTTTATTCCAGGTGTGTGTTTCATAAAGACGAGGTCCTCCACTCTCCAGCTGGTTaGAGGCGTGCTGTCTGTAGG +
Preference number: 4 (lower is better)
Translates to: TCKKWFYSRCVFHKDEVLHSPAG*RRAVCR
Trigger: CCTACAGACAGCACGCCTTCAACCAGCTGGAGAGTG...GAGGACCTCGTCTTTATGAAACACACACCTGGAATAAAACCACTTCTTACATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337827.8
ENST00000448469.8
ENST00000553471.6
CDS-3UTR TCA 90 bp TTGCTGTTTTTACCCAGGAAGTATGTCCTGCCTGAATTTGTACCACTGCCTTCTCCACCTGACCTGTGCTaGTTCCTGGTTTTGGTCCAA +
Preference number: 4 (lower is better)
Translates to: LLFLPRKYVLPEFVPLPSPPDLC*FLVLVQ
Trigger: TTGGACCAAAACCAGGAATCAGCACAGGTCAGGTGG...AGAAGGCAGTGGTACAAATTCAGGCAGGACATACTTCCTGGGTAAAAACAGCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR TCA 90 bp TTCTTTTGGTGCTTTGCTGCTCTTCTATCCATGTTCATTTGCAAATTACCCATCTGGGCTTGGCATCTCTaGCAGGTCACCGGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: FFWCFAALLSMFICKLPIWAWHL*QVTGLL
Trigger: GAGAAGCCCGGTGACCTGTCAGAGATGCCAAGCCCA...GATGGGTAATTTGCAAATGAACATGGATAGAAGAGCAGCAAAGCACCAAAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448469.8
CDS-3UTR GCA 90 bp CAGTCATGCCCCTCATTTAAATCAGGCTGTGTGTTCCTATGTAAGAGGCTGCCCATCCATCCACACTTCTaGAGTGCGCTTAGTATTCCT +
Preference number: 4 (lower is better)
Translates to: QSCPSFKSGCVFLCKRLPIHPHF*SALSIP
Trigger: AGGAATACTAAGCGCACTGCAGAAGTGTGGATGGAT...GGGCAGCCTCTTACATAGGAACACACAGCCTGATTTAAATGAGGGGCATGACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR GCA 90 bp ACATGTAAGAAGTGGTTTTATTCCAGGTGTGTGTTTCATAAAGACGAGGTCCTCAATGATGCCGGGGAGTaGTTCCTTCACGGGGACCGT +
Preference number: 4 (lower is better)
Translates to: TCKKWFYSRCVFHKDEVLNDAGE*FLHGDR
Trigger: ACGGTCCCCGTGAAGGAAGCACTCCCCGGCATCATT...GAGGACCTCGTCTTTATGAAACACACACCTGGAATAAAACCACTTCTTACATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000337827.8
ENST00000448469.8
ENST00000553471.6
CDS-3UTR GCA 90 bp GAGAGGTCTCAGCCTGACACATGGCCAAATAGAAGTGGAGTCTGTTTAATAAACAAGCAGTTCACCCCCTaGTTAATGATGCCGGGGAGT +
Preference number: 4 (lower is better)
Translates to: ERSQPDTWPNRSGVCLINKQFTP*LMMPGS
Trigger: ACTCCCCGGCATCATTAAGCAGGGGGTGAACTGCTT...GTTTATTAAACAGACTCCACTTCTATTTGGCCATGTGTCAGGCTGAGACCTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448469.8
CDS-3UTR GCA 90 bp TCTGCTACCCAATCAAGCAAAGCTGGTCTGGTAAGACTCTTTTCAGAATTATTTCTCCAGAGCAGGTGCTaGGGACCACAGACACTTGGC +
Preference number: 4 (lower is better)
Translates to: SATQSSKAGLVRLFSELFLQSRC*GPQTLG
Trigger: GCCAAGTGTCTGTGGTCCGCAGCACCTGCTCTGGAG...AAATAATTCTGAAAAGAGTCTTACCAGACCAGCTTTGCTTGATTGGGTAGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR GCA 90 bp TTTTTACCCAGGAAGTATGTCCTGCCTGAATTTGTACCACTGCCTTCTTGTGTGCCAAGGTGTATTCTCTaGAGCCAGCTAGGGCTTTGC +
Preference number: 4 (lower is better)
Translates to: FLPRKYVLPEFVPLPSCVPRCIL*SQLGLC
Trigger: GCAAAGCCCTAGCTGGCTGCAGAGAATACACCTTGG...CACACAAGAAGGCAGTGGTACAAATTCAGGCAGGACATACTTCCTGGGTAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR GCA 90 bp TTGCTGTTTTTACCCAGGAAGTATGTCCTGCCTGAATTTGTACCACTGCCTTCTTGGGGGAATGGAGGCTaGAGCCAAGGTCTTTTACAG +
Preference number: 4 (lower is better)
Translates to: LLFLPRKYVLPEFVPLPSWGNGG*SQGLLQ
Trigger: CTGTAAAAGACCTTGGCTGCAGCCTCCATTCCCCCA...AGAAGGCAGTGGTACAAATTCAGGCAGGACATACTTCCTGGGTAAAAACAGCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR GCA 90 bp TCTGCTACCCAATCAAGCAAAGCTGGTCTGGTAAGACTCTTTTCAGAATTATTTAGAAGCTGGCTGGGTTaGCCCCTCCTTCTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: SATQSSKAGLVRLFSELFRSWLG*PLLLEE
Trigger: CTCCTCCAGAAGGAGGGGGCAACCCAGCCAGCTTCT...AAATAATTCTGAAAAGAGTCTTACCAGACCAGCTTTGCTTGATTGGGTAGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR CCA 90 bp ACATGTAAGAAGTGGTTTTATTCCAGGTGTGTGTTTCATAAAGACGAGGTCCTCGGATGGCGATGGCATTaGCGCGGATCTTCCTCATGG +
Preference number: 4 (lower is better)
Translates to: TCKKWFYSRCVFHKDEVLGWRWH*RGSSSW
Trigger: CCATGAGGAAGATCCGCGCCAATGCCATCGCCATCC...GAGGACCTCGTCTTTATGAAACACACACCTGGAATAAAACCACTTCTTACATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337827.8
ENST00000448469.8
ENST00000553471.6
CDS-3UTR CCA 90 bp TTCTTTTGGTGCTTTGCTGCTCTTCTATCCATGTTCATTTGCAAATTACCCATCCTGTGCGCAGCAGGGTaGAACGGGCCTCATTGTGGA +
Preference number: 4 (lower is better)
Translates to: FFWCFAALLSMFICKLPILCAAG*NGPHCG
Trigger: TCCACAATGAGGCCCGTTCCACCCTGCTGCGCACAG...GATGGGTAATTTGCAAATGAACATGGATAGAAGAGCAGCAAAGCACCAAAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448469.8
CDS-3UTR CCA 90 bp AGGACAGGGCTAGACTTGAGCATGTTCAGTTTCACTTTTACAGAAAGGAGGCCCGTGTTCACTTCGCAGTaGCTATCCAGAAAGGTGAGA +
Preference number: 4 (lower is better)
Translates to: RTGLDLSMFSFTFTERRPVFTSQ*LSRKVR
Trigger: TCTCACCTTTCTGGATAGCCACTGCGAAGTGAACAC...GGGCCTCCTTTCTGTAAAAGTGAAACTGAACATGCTCAAGTCTAGCCCTGTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR CCA 90 bp GAGAGGTCTCAGCCTGACACATGGCCAAATAGAAGTGGAGTCTGTTTAATAAACCTTAGGGGCTGTTCTTaGTCCAGAAGGGAAGTTCCC +
Preference number: 4 (lower is better)
Translates to: ERSQPDTWPNRSGVCLINLRGCS*SRREVP
Trigger: GGGAACTTCCCTTCTGGACCAAGAACAGCCCCTAAG...GTTTATTAAACAGACTCCACTTCTATTTGGCCATGTGTCAGGCTGAGACCTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448469.8
CDS-3UTR TCA 90 bp ACATGTAAGAAGTGGTTTTATTCCAGGTGTGTGTTTCATAAAGACGAGGTCCTCTGGATCCTTGGCCTATaGAAGACAGGGGGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: TCKKWFYSRCVFHKDEVLWILGL*KTGGSC
Trigger: ACAGGAGCCCCCTGTCTTTCATAGGCCAAGGATCCA...GAGGACCTCGTCTTTATGAAACACACACCTGGAATAAAACCACTTCTTACATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR GCA 90 bp AGGACAGGGCTAGACTTGAGCATGTTCAGTTTCACTTTTACAGAAAGGAGGCCCACGAAGGTCAGCAGATaGTGCAAGGTAGGCAAAATT +
Preference number: 4 (lower is better)
Translates to: RTGLDLSMFSFTFTERRPTKVSR*CKVGKI
Trigger: AATTTTGCCTACCTTGCAGCATCTGCTGACCTTCGT...GGGCCTCCTTTCTGTAAAAGTGAAACTGAACATGCTCAAGTCTAGCCCTGTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR GCA 90 bp ACATGTAAGAAGTGGTTTTATTCCAGGTGTGTGTTTCATAAAGACGAGGTCCTCAGAACAGGGCTGCGTTaGCACAAAGGACCGGCTGAT +
Preference number: 4 (lower is better)
Translates to: TCKKWFYSRCVFHKDEVLRTGLR*HKGPAD
Trigger: ATCAGCCGGTCCTTTGTGGCAACGCAGCCCTGTTCT...GAGGACCTCGTCTTTATGAAACACACACCTGGAATAAAACCACTTCTTACATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337827.8
ENST00000448469.8
ENST00000553471.6
CDS-3UTR GCA 90 bp TTTTTACCCAGGAAGTATGTCCTGCCTGAATTTGTACCACTGCCTTCTTGTGTGCAGGTCTTTCCTAAGTaGCTGGCAGTGAAGACCTCT +
Preference number: 4 (lower is better)
Translates to: FLPRKYVLPEFVPLPSCVQVFPK*LAVKTS
Trigger: AGAGGTCTTCACTGCCAGGCACTTAGGAAAGACCTG...CACACAAGAAGGCAGTGGTACAAATTCAGGCAGGACATACTTCCTGGGTAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR GCA 90 bp CAGTCATGCCCCTCATTTAAATCAGGCTGTGTGTTCCTATGTAAGAGGCTGCCCTGCCACGTGCAAATCTaGATTTCCAGCTTCTATGTA +
Preference number: 4 (lower is better)
Translates to: QSCPSFKSGCVFLCKRLPCHVQI*ISSFYV
Trigger: TACATAGAAGCTGGAAATGCAGATTTGCACGTGGCA...GGGCAGCCTCTTACATAGGAACACACAGCCTGATTTAAATGAGGGGCATGACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR CCA 90 bp GGCTCTTGCTTTTCTGTAGTTTGCAGAAGTTCCTGTCCAGATCAGAGGAGGAGGTCATACTTTCCCAAGTaGTTAAACCAGGACTTGTCG +
Preference number: 4 (lower is better)
Translates to: GSCFSVVCRSSCPDQRRRSYFPK*LNQDLS
Trigger: CGACAAGTCCTGGTTTAACCACTTGGGAAAGTATGA...CCTCCTCCTCTGATCTGGACAGGAACTTCTGCAAACTACAGAAAAGCAAGAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR CCA 90 bp TTTTTACCCAGGAAGTATGTCCTGCCTGAATTTGTACCACTGCCTTCTTGTGTGCCCCAGATGTCCATCTaGGCATCATACTTTCCCAAG +
Preference number: 4 (lower is better)
Translates to: FLPRKYVLPEFVPLPSCVPQMSI*ASYFPK
Trigger: CTTGGGAAAGTATGATGCCCAGATGGACATCTGGGG...CACACAAGAAGGCAGTGGTACAAATTCAGGCAGGACATACTTCCTGGGTAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR CCA 90 bp TTTTTACCCAGGAAGTATGTCCTGCCTGAATTTGTACCACTGCCTTCTTGTGTGCAGAAAGGAAGGCGCTaGTGCATGTGGACATGTAAG +
Preference number: 4 (lower is better)
Translates to: FLPRKYVLPEFVPLPSCVQKGRR*CMWTCK
Trigger: CTTACATGTCCACATGCACCAGCGCCTTCCTTTCTG...CACACAAGAAGGCAGTGGTACAAATTCAGGCAGGACATACTTCCTGGGTAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR CCA 90 bp CTTGGACATCACTGTGTCTGGAGCTCAGTTTCCCTAGTCTGCCAACAGTCAAGACATGGGCAGAATAATTaGCTTGACCTAGATGTAGAC +
Preference number: 4 (lower is better)
Translates to: LGHHCVWSSVSLVCQQSRHGQNN*LDLDVD
Trigger: GTCTACATCTAGGTCAAGCCAATTATTCTGCCCATG...TCTTGACTGTTGGCAGACTAGGGAAACTGAGCTCCAGACACAGTGATGTCCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR TCA 90 bp TTCTTTTGGTGCTTTGCTGCTCTTCTATCCATGTTCATTTGCAAATTACCCATCGTGCAGAGCCTGATCTaGCCACAGCAAAGGACAGAG +
Preference number: 4 (lower is better)
Translates to: FFWCFAALLSMFICKLPIVQSLI*PQQRTE
Trigger: CTCTGTCCTTTGCTGTGGTCAGATCAGGCTCTGCAC...GATGGGTAATTTGCAAATGAACATGGATAGAAGAGCAGCAAAGCACCAAAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448469.8
CDS-3UTR TCA 90 bp GAGAGGTCTCAGCCTGACACATGGCCAAATAGAAGTGGAGTCTGTTTAATAAACGTCAAAAATGACAAATaGGGCTGGGACTACTCAGGG +
Preference number: 4 (lower is better)
Translates to: ERSQPDTWPNRSGVCLINVKNDK*GWDYSG
Trigger: CCCTGAGTAGTCCCAGCCTCATTTGTCATTTTTGAC...GTTTATTAAACAGACTCCACTTCTATTTGGCCATGTGTCAGGCTGAGACCTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448469.8
CDS-3UTR TCA 90 bp CAGTCATGCCCCTCATTTAAATCAGGCTGTGTGTTCCTATGTAAGAGGCTGCCCCCCTTCTCAGCTGTGTaGTCTGACATATATTCTTTA +
Preference number: 4 (lower is better)
Translates to: QSCPSFKSGCVFLCKRLPPFSAV*SDIYSL
Trigger: TAAAGAATATATGTCAGATCACACAGCTGAGAAGGG...GGGCAGCCTCTTACATAGGAACACACAGCCTGATTTAAATGAGGGGCATGACTG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR TCA 90 bp ACATGTAAGAAGTGGTTTTATTCCAGGTGTGTGTTTCATAAAGACGAGGTCCTCTGTACCCTGAGCAAGTaGCTCCACCTCTCTGTGCAT +
Preference number: 4 (lower is better)
Translates to: TCKKWFYSRCVFHKDEVLCTLSK*LHLSVH
Trigger: ATGCACAGAGAGGTGGAGTCACTTGCTCAGGGTACA...GAGGACCTCGTCTTTATGAAACACACACCTGGAATAAAACCACTTCTTACATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR CCA 90 bp TTCTTTTGGTGCTTTGCTGCTCTTCTATCCATGTTCATTTGCAAATTACCCATCGGAGTAGGACACAGATaGGCAGCTGTAATGGCGGGT +
Preference number: 4 (lower is better)
Translates to: FFWCFAALLSMFICKLPIGVGHR*AAVMAG
Trigger: ACCCGCCATTACAGCTGCCCATCTGTGTCCTACTCC...GATGGGTAATTTGCAAATGAACATGGATAGAAGAGCAGCAAAGCACCAAAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448469.8
CDS-3UTR CCA 90 bp TTCTTTTGGTGCTTTGCTGCTCTTCTATCCATGTTCATTTGCAAATTACCCATCAGACCCCCAGGGTCCTaGTACCAACAGTCATTTGCC +
Preference number: 4 (lower is better)
Translates to: FFWCFAALLSMFICKLPIRPPGS*YQQSFA
Trigger: GGCAAATGACTGTTGGTACCAGGACCCTGGGGGTCT...GATGGGTAATTTGCAAATGAACATGGATAGAAGAGCAGCAAAGCACCAAAAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448469.8
CDS-3UTR GCA 90 bp ACATGTAAGAAGTGGTTTTATTCCAGGTGTGTGTTTCATAAAGACGAGGTCCTCCCCCTAGTGGGAAGCTaGCTTCTTTGTAGGGATGAA +
Preference number: 4 (lower is better)
Translates to: TCKKWFYSRCVFHKDEVLPLVGS*LLCRDE
Trigger: TTCATCCCTACAAAGAAGGCAGCTTCCCACTAGGGG...GAGGACCTCGTCTTTATGAAACACACACCTGGAATAAAACCACTTCTTACATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR CCA 90 bp ACATGTAAGAAGTGGTTTTATTCCAGGTGTGTGTTTCATAAAGACGAGGTCCTCAAAATAGATGGAGAGTaGAAATGGGGCTCAGCGCGC +
Preference number: 4 (lower is better)
Translates to: TCKKWFYSRCVFHKDEVLKIDGE*KWGSAR
Trigger: GCGCGCTGAGCCCCATTTCCACTCTCCATCTATTTT...GAGGACCTCGTCTTTATGAAACACACACCTGGAATAAAACCACTTCTTACATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR TCA 90 bp TCTGCTACCCAATCAAGCAAAGCTGGTCTGGTAAGACTCTTTTCAGAATTATTTTGTTCTCAGCGGCTGTaGAAAGGAACTGGGAGTTCT +
Preference number: 4 (lower is better)
Translates to: SATQSSKAGLVRLFSELFCSQRL*KGTGSS
Trigger: AGAACTCCCAGTTCCTTTTCACAGCCGCTGAGAACA...AAATAATTCTGAAAAGAGTCTTACCAGACCAGCTTTGCTTGATTGGGTAGCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR CCA 90 bp ACATGTAAGAAGTGGTTTTATTCCAGGTGTGTGTTTCATAAAGACGAGGTCCTCGAACGTGTGTCATGGTaGGTATTTGCTGATGGTCCT +
Preference number: 4 (lower is better)
Translates to: TCKKWFYSRCVFHKDEVLERVSW*VFADGP
Trigger: AGGACCATCAGCAAATACCCACCATGACACACGTTC...GAGGACCTCGTCTTTATGAAACACACACCTGGAATAAAACCACTTCTTACATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448469.8
3UTR CAA 72 bp CTTTTGGTGCTTTGCTGCTCTTCTATCCATGTTCATTaGCAAATTACCCATCCTTTGCTGCCAAGACACCAT +
Preference number: 4 (lower is better)
Translates to: LLVLCCSSIHVH*QITHPLLPRHH
Trigger: ATGGTGTCTTGGCAGCAAAGGATGGGTAATTTGCAAATGAACATGGATAGAAGAGCAGCAAAGCACCAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448469.8
CDS-3UTR GCA 90 bp ACATGTAAGAAGTGGTTTTATTCCAGGTGTGTGTTTCATAAAGACGAGGTCCTCTTTCTCCTCCATTTCTaGTTGCCTTCTCTAGGGTTG +
Preference number: 4 (lower is better)
Translates to: TCKKWFYSRCVFHKDEVLFLLHF*LPSLGL
Trigger: CAACCCTAGAGAAGGCAAGCAGAAATGGAGGAGAAA...GAGGACCTCGTCTTTATGAAACACACACCTGGAATAAAACCACTTCTTACATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR CCA 90 bp TTCTTTTGGTGCTTTGCTGCTCTTCTATCCATGTTCATTTGCAAATTACCCATCGAAGGGACTGTGTCCTaGGTAAGAGACCTTGTTCTT +
Preference number: 4 (lower is better)
Translates to: FFWCFAALLSMFICKLPIEGTVS*VRDLVL
Trigger: AAGAACAAGGTCTCTTACCCAGGACACAGTCCCTTC...GATGGGTAATTTGCAAATGAACATGGATAGAAGAGCAGCAAAGCACCAAAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448469.8
3UTR CAA 72 bp CAGAAGTCCCCTGTGTTTATTTACAATTTAGCTTGGTaGCCACGTGCAAATCTGCATTTCCAGCTTCTATGT +
Preference number: 4 (lower is better)
Translates to: QKSPVFIYNLAW*PRANLHFQLLC
Trigger: ACATAGAAGCTGGAAATGCAGATTTGCACGTGGCAACCAAGCTAAATTGTAAATAAACACAGGGGACTTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
3UTR CAA 72 bp AAAGCAGAAGTCCCCTGTGTTTATTTACAATTTAGCTaGGTTGCCACGTGCAAATCTGCATTTCCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: KAEVPCVYLQFS*VATCKSAFPAS
Trigger: AGAAGCTGGAAATGCAGATTTGCACGTGGCAACCAAGCTAAATTGTAAATAAACACAGGGGACTTCTGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR TCA 90 bp ACATGTAAGAAGTGGTTTTATTCCAGGTGTGTGTTTCATAAAGACGAGGTCCTCAAGCTAACACTTATTTaGACTGTGGTGGTTGTCAGG +
Preference number: 4 (lower is better)
Translates to: TCKKWFYSRCVFHKDEVLKLTLI*TVVVVR
Trigger: CCTGACAACCACCACAGTTCAAATAAGTGTTAGCTT...GAGGACCTCGTCTTTATGAAACACACACCTGGAATAAAACCACTTCTTACATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR GCA 90 bp ACATGTAAGAAGTGGTTTTATTCCAGGTGTGTGTTTCATAAAGACGAGGTCCTCAAGGTCAGCAGATGCTaGAAGGTAGGCAAAATTATC +
Preference number: 4 (lower is better)
Translates to: TCKKWFYSRCVFHKDEVLKVSRC*KVGKII
Trigger: GATAATTTTGCCTACCTTGCAGCATCTGCTGACCTT...GAGGACCTCGTCTTTATGAAACACACACCTGGAATAAAACCACTTCTTACATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337827.8
ENST00000448469.8
ENST00000553471.6
CDS-3UTR CCA 90 bp ACATGTAAGAAGTGGTTTTATTCCAGGTGTGTGTTTCATAAAGACGAGGTCCTCTTATTTGAACTGTGGTaGTTGTCAGGAGCTAGGGAT +
Preference number: 4 (lower is better)
Translates to: TCKKWFYSRCVFHKDEVLLFELW*LSGARD
Trigger: ATCCCTAGCTCCTGACAACCACCACAGTTCAAATAA...GAGGACCTCGTCTTTATGAAACACACACCTGGAATAAAACCACTTCTTACATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR GCA 90 bp TTCTTTTGGTGCTTTGCTGCTCTTCTATCCATGTTCATTTGCAAATTACCCATCACCTTGTTCTTTTGGTaGTTTGCTGCTCTTCTATCC +
Preference number: 4 (lower is better)
Translates to: FFWCFAALLSMFICKLPITLFFW*FAALLS
Trigger: GGATAGAAGAGCAGCAAAGCACCAAAAGAACAAGGT...GATGGGTAATTTGCAAATGAACATGGATAGAAGAGCAGCAAAGCACCAAAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448469.8
CDS-3UTR CCA 90 bp ACATGTAAGAAGTGGTTTTATTCCAGGTGTGTGTTTCATAAAGACGAGGTCCTCACTAAAATGATCTCCTaGATCAAGTTGGCAGGAGTT +
Preference number: 4 (lower is better)
Translates to: TCKKWFYSRCVFHKDEVLTKMIS*IKLAGV
Trigger: AACTCCTGCCAACTTGATCCAGGAGATCATTTTAGT...GAGGACCTCGTCTTTATGAAACACACACCTGGAATAAAACCACTTCTTACATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337827.8
ENST00000448469.8
ENST00000553471.6
CDS-3UTR GCA 90 bp TTCTTTTGGTGCTTTGCTGCTCTTCTATCCATGTTCATTTGCAAATTACCCATCGTTCTTTTGGTGCTTTaGTGCTCTTCTATCCATGTT +
Preference number: 4 (lower is better)
Translates to: FFWCFAALLSMFICKLPIVLLVL*CSSIHV
Trigger: AACATGGATAGAAGAGCAGCAAAGCACCAAAAGAAC...GATGGGTAATTTGCAAATGAACATGGATAGAAGAGCAGCAAAGCACCAAAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448469.8
CDS-3UTR GCA 90 bp TTCTTTTGGTGCTTTGCTGCTCTTCTATCCATGTTCATTTGCAAATTACCCATCCTATCCATGTTCATTTaGAAATTACCCATCCTTTGC +
Preference number: 4 (lower is better)
Translates to: FFWCFAALLSMFICKLPILSMFI*KLPILC
Trigger: GCAAAGGATGGGTAATTTGCAAATGAACATGGATAG...GATGGGTAATTTGCAAATGAACATGGATAGAAGAGCAGCAAAGCACCAAAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448469.8
CDS GCA 90 bp GAGCGGGATGGTGCGGTCCTCGCGGAGCTGCTCCGACCTCCTGCCTaGCCTCTGCGCGCCCCGGCCGCCGGAGGATGCTGCGTGGGCTCG +
Preference number: 5 (lower is better)
Translates to: ERDGAVLAELLRPPA*PLRAPAAGGCCVGS
Trigger: CGAGCCCACGCAGCATCCTCCGGCGGCCGGGGCGCGCAGAGGGCAGGCAGGAGGTCGGAGCAGCTCCGCGAGGACCGCACCATCCCGCTC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337827.8
ENST00000448469.8
ENST00000553471.6
ENST00000553669.1
ENST00000554317.5
ENST00000555920.5
CDS GCA 90 bp CCGACTGGAGACGCGCGACCCCCGACCTGGGCCCGCGCCGCGAGCTaGAGTTCCGGGCTGCGCTCTGGCGCGGGATTCAAGGTGTGTTCG +
Preference number: 5 (lower is better)
Translates to: PTGDARPPTWARAAS*SSGLRSGAGFKVCS
Trigger: CGAACACACCTTGAATCCCGCGCCAGAGCGCAGCCCGGAACTGCAGCTCGCGGCGCGGGCCCAGGTCGGGGGTCGCGCGTCTCCAGTCGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554317.5
CDS GCA 90 bp CGCGACCCCCGACCTGGGCCCGCGCCGCGAGCTGCAGTTCCGGGCTaGGCTCTGGCGCGGGATTCAAGGTGTGTTCGGCGAGTCCTTGTG +
Preference number: 5 (lower is better)
Translates to: RDPRPGPAPRAAVPG*ALARDSRCVRRVLV
Trigger: CACAAGGACTCGCCGAACACACCTTGAATCCCGCGCCAGAGCGCAGCCCGGAACTGCAGCTCGCGGCGCGGGCCCAGGTCGGGGGTCGCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554317.5
CDS CCA 90 bp CCCGACCTGGGCCCGCGCCGCGAGCTGCAGTTCCGGGCTGCGCTCTaGCGCGGGATTCAAGGTGTGTTCGGCGAGTCCTTGTGTAGGGGC +
Preference number: 5 (lower is better)
Translates to: PDLGPRRELQFRAAL*RGIQGVFGESLCRG
Trigger: GCCCCTACACAAGGACTCGCCGAACACACCTTGAATCCCGCGCCAGAGCGCAGCCCGGAACTGCAGCTCGCGGCGCGGGCCCAGGTCGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554317.5
CDS CCA 90 bp TCAGTCCTGGGCCCGCGCCGCGAGCTGCAGTTCCGGGCTGCGCTCTaGCGCGGGATTCAAGGTGTGTTCGGCGAGTCCTTGTGTAGGGGC +
Preference number: 5 (lower is better)
Translates to: SVLGPRRELQFRAAL*RGIQGVFGESLCRG
Trigger: GCCCCTACACAAGGACTCGCCGAACACACCTTGAATCCCGCGCCAGAGCGCAGCCCGGAACTGCAGCTCGCGGCGCGGGCCCAGGACTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554858.1
ENST00000555920.5
CDS-3UTR CAA 90 bp CAGGTGCTGCGGACCACAGACACTTGGCTGCTGACCCCAAGGGCCGTGTGGAGGCATCCCCCGCAGGCCTaGGGGTGCTGGAACCCTGGG +
Preference number: 5 (lower is better)
Translates to: QVLRTTDTWLLTPRAVWRHPPQA*GCWNPG
Trigger: CCCAGGGTTCCAGCACCCCAAGGCCTGCGGGGGATG...CCTCCACACGGCCCTTGGGGTCAGCAGCCAAGTGTCTGTGGTCCGCAGCACCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR CAA 90 bp GTCCAGCACCCTGACCATCTCCTCTCCCGGGGCAAGGCCAGGACAGCACTGAGGTCCAGAGGGGTGCACTaGGGCACGGGAGTGCTGCCG +
Preference number: 5 (lower is better)
Translates to: VQHPDHLLSRGKARTALRSRGVH*GTGVLP
Trigger: CGGCAGCACTCCCGTGCCCAAGTGCACCCCTCTGGA...CCTCAGTGCTGTCCTGGCCTTGCCCCGGGAGAGGAGATGGTCAGGGTGCTGGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448469.8
CDS-3UTR CAA 90 bp AAGGGGCCTGCGCTGGCAAGTCCAGAGGGGTGCACTTGGGCACGGGAGTGCTGCCGCAGCCCCAGCTGTTaGTTTTCGCTCGCGCCTAGC +
Preference number: 5 (lower is better)
Translates to: KGPALASPEGCTWARECCRSPSC*FSLAPS
Trigger: GCTAGGCGCGAGCGAAAACAAACAGCTGGGGCTGCG...GCAGCACTCCCGTGCCCAAGTGCACCCCTCTGGACTTGCCAGCGCAGGCCCCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR CAA 90 bp GTCCAGCACCCTGACCATCTCCTCTCCCGGGGCAAGGCCAGGACAGCACTGAGGGCGGGCTGCGGGTTCTaGGCAGACCCTCTGCAGATC +
Preference number: 5 (lower is better)
Translates to: VQHPDHLLSRGKARTALRAGCGF*ADPLQI
Trigger: GATCTGCAGAGGGTCTGCCAAGAACCCGCAGCCCGC...CCTCAGTGCTGTCCTGGCCTTGCCCCGGGAGAGGAGATGGTCAGGGTGCTGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448469.8
CDS-3UTR CAA 90 bp CGCTGGCAAGTCCAGAGGGGTGCACTTGGGCACGGGAGTGCTGCCGAGAGGACGGCAGGCGATGGCAGTTaGAGCACGCCAGGGAGGAAG +
Preference number: 5 (lower is better)
Translates to: RWQVQRGALGHGSAAERTAGDGS*STPGRK
Trigger: CTTCCTCCCTGGCGTGCTCAAACTGCCATCGCCTGC...CGTCCTCTCGGCAGCACTCCCGTGCCCAAGTGCACCCCTCTGGACTTGCCAGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS GCA 90 bp GTGGCAACAGCTGCCACTGCTGGGCCTGGGCGTCAGCCTGACACTTaGTGGTCACCAGCTGGGCAGGCTTTGTCTCCAGGCAGAGGCCAC +
Preference number: 5 (lower is better)
Translates to: VATAATAGPGRQPDT*WSPAGQALSPGRGH
Trigger: GTGGCCTCTGCCTGGAGACAAAGCCTGCCCAGCTGGTGACCAGCAAGTGTCAGGCTGACGCCCAGGCCCAGCAGTGGCAGCTGTTGCCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337827.8
ENST00000448469.8
ENST00000556829.1
CDS-3UTR CAA 90 bp GAAGGGGCCTGCGCTGGCAAGTCCAGAGGGGTGCACTTGGGCACGGGAGTGCTGCGGTCTGGGCTCAGCTaGTCACTCTCCAGCTGGTTG +
Preference number: 5 (lower is better)
Translates to: EGACAGKSRGVHLGTGVLRSGLS*SLSSWL
Trigger: CAACCAGCTGGAGAGTGACAAGCTGAGCCCAGACCG...CAGCACTCCCGTGCCCAAGTGCACCCCTCTGGACTTGCCAGCGCAGGCCCCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS TCA 90 bp GCCAGACCGGGCCCGCCCAGAGGAGGGATTGGAAGCTGGTGCACTTaGCATTCGAAGAGCGCGAAGGGGAAACGACGCTGCCTCACACCC +
Preference number: 5 (lower is better)
Translates to: ARPGPPRGGIGSWCT*HSKSAKGKRRCLTP
Trigger: GGGTGTGAGGCAGCGTCGTTTCCCCTTCGCGCTCTTCGAATGTCAAGTGCACCAGCTTCCAATCCCTCCTCTGGGCGGGCCCGGTCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554858.1
CDS CCA 90 bp AGAAAGTGCCCAGGATCCAGGCTACGGTCAGGATGGCGATGGCATTaGCGCGGATCTTCCTCATGGTGGGCAGACGGGCGCCCCAGGTGG +
Preference number: 5 (lower is better)
Translates to: RKCPGSRLRSGWRWH*RGSSSWWADGRPRW
Trigger: CCACCTGGGGCGCCCGTCTGCCCACCATGAGGAAGATCCGCGCCAATGCCATCGCCATCCTGACCGTAGCCTGGATCCTGGGCACTTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337827.8
ENST00000448469.8
ENST00000553471.6
ENST00000554317.5
ENST00000555920.5
CDS-3UTR CAA 90 bp GAAGGGGCCTGCGCTGGCAAGTCCAGAGGGGTGCACTTGGGCACGGGAGTGCTGAGGATGGCGATGGCATaGGCGCGGATCTTCCTCATG +
Preference number: 5 (lower is better)
Translates to: EGACAGKSRGVHLGTGVLRMAMA*ARIFLM
Trigger: CATGAGGAAGATCCGCGCCAATGCCATCGCCATCCT...CAGCACTCCCGTGCCCAAGTGCACCCCTCTGGACTTGCCAGCGCAGGCCCCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR CAA 90 bp CGCTGGCAAGTCCAGAGGGGTGCACTTGGGCACGGGAGTGCTGCCGAGAGGACGAGGATGGCGATGGCATaGGCGCGGATCTTCCTCATG +
Preference number: 5 (lower is better)
Translates to: RWQVQRGALGHGSAAERTRMAMA*ARIFLM
Trigger: CATGAGGAAGATCCGCGCCAATGCCATCGCCATCCT...CGTCCTCTCGGCAGCACTCCCGTGCCCAAGTGCACCCCTCTGGACTTGCCAGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR CAA 90 bp GAAGGGGCCTGCGCTGGCAAGTCCAGAGGGGTGCACTTGGGCACGGGAGTGCTGTCATTGCGCAGGCACTaGACCTTGGGGATCCTGGTC +
Preference number: 5 (lower is better)
Translates to: EGACAGKSRGVHLGTGVLSLRRH*TLGILV
Trigger: GACCAGGATCCCCAAGGTCAAGTGCCTGCGCAATGA...CAGCACTCCCGTGCCCAAGTGCACCCCTCTGGACTTGCCAGCGCAGGCCCCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR CAA 90 bp CACCTGTTGGCCCCCACCAGAGCAGTCAGGAGTTCCTGGGGCACCACAGGGCATTCTGGGGAGAGGCCTTaGCCCTGGGCCCAGTTCTGT +
Preference number: 5 (lower is better)
Translates to: HLLAPTRAVRSSWGTTGHSGERP*PWAQFC
Trigger: ACAGAACTGGGCCCAGGGCAAAGGCCTCTCCCCAGA...ATGCCCTGTGGTGCCCCAGGAACTCCTGACTGCTCTGGTGGGGGCCAACAGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS TCA 90 bp CCCGGATGGGCCGGTCTGGGCTCAGCTTGTCACTCTCCAGCTGGTTaGAGGCGTGCTGTCTGTAGGGGTCCTCTCCAGCCTTCAGCTGCT +
Preference number: 5 (lower is better)
Translates to: PGWAGLGSACHSPAG*RRAVCRGPLQPSAA
Trigger: AGCAGCTGAAGGCTGGAGAGGACCCCTACAGACAGCACGCCTTCAACCAGCTGGAGAGTGACAAGCTGAGCCCAGACCGGCCCATCCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337827.8
ENST00000448469.8
ENST00000553471.6
ENST00000553669.1
ENST00000553740.1
ENST00000555920.5
CDS TCA 90 bp CATGTGTGTGGCAACAGCTGCCACTGCTGGGCCTGGGCGTCAGCCTaGCACTTGCTGGTCACCAGCTGGGCAGGCTTTGTCTCCAGGCAG +
Preference number: 5 (lower is better)
Translates to: HVCGNSCHCWAWASA*HLLVTSWAGFVSRQ
Trigger: CTGCCTGGAGACAAAGCCTGCCCAGCTGGTGACCAGCAAGTGTCAGGCTGACGCCCAGGCCCAGCAGTGGCAGCTGTTGCCACACACATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337827.8
ENST00000448469.8
ENST00000556829.1
CDS CCA 90 bp ACCCGCTGCAGCATGGGCGGCAGCCACTCGGTGTTCACTTCGCAGTaGCTATCCAGAAAGGTGAGAACGGTAGCTGCAGCCACGTCCGCC +
Preference number: 5 (lower is better)
Translates to: TRCSMGGSHSVFTSQ*LSRKVRTVAAATSA
Trigger: GGCGGACGTGGCTGCAGCTACCGTTCTCACCTTTCTGGATAGCCACTGCGAAGTGAACACCGAGTGGCTGCCGCCCATGCTGCAGCGGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337827.8
ENST00000448469.8
ENST00000553471.6
ENST00000553669.1
CDS CCA 90 bp CCTTGTGTAGGGGCGGCTGGGCGGGGGAGAGTCCTGAGTTTGTACTaGAATCTGCAGCTGAGATTAGCCAGACCGGGCCCGCCCAGAGGA +
Preference number: 5 (lower is better)
Translates to: PCVGAAGRGRVLSLY*NLQLRLARPGPPRG
Trigger: TCCTCTGGGCGGGCCCGGTCTGGCTAATCTCAGCTGCAGATTCCAGTACAAACTCAGGACTCTCCCCCGCCCAGCCGCCCCTACACAAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554858.1
CDS-3UTR CAA 90 bp GGGAGACATCCCCCGCAGGCCTTGGGGTGCTGGAACCCTGGGACGACAGTCATACGGTCTGGGCTCAGCTaGTCACTCTCCAGCTGGTTG +
Preference number: 5 (lower is better)
Translates to: GRHPPQALGCWNPGTTVIRSGLS*SLSSWL
Trigger: CAACCAGCTGGAGAGTGACAAGCTGAGCCCAGACCG...TATGACTGTCGTCCCAGGGTTCCAGCACCCCAAGGCCTGCGGGGGATGTCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR CAA 90 bp GTCCAGCACCCTGACCATCTCCTCTCCCGGGGCAAGGCCAGGACAGCACTGAGGTCATTGCGCAGGCACTaGACCTTGGGGATCCTGGTC +
Preference number: 5 (lower is better)
Translates to: VQHPDHLLSRGKARTALRSLRRH*TLGILV
Trigger: GACCAGGATCCCCAAGGTCAAGTGCCTGCGCAATGA...CCTCAGTGCTGTCCTGGCCTTGCCCCGGGAGAGGAGATGGTCAGGGTGCTGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448469.8
CDS-3UTR CAA 90 bp CTGTTGGCCCCCACCAGAGCAGTCAGGAGTTCCTGGGGCACCACAGGGCATGGACCTTCCCGCCGATCATaGCGCAGGCACTTGACCTTG +
Preference number: 5 (lower is better)
Translates to: LLAPTRAVRSSWGTTGHGPSRRS*RRHLTL
Trigger: CAAGGTCAAGTGCCTGCGCAATGATCGGCGGGAAGG...TCCATGCCCTGTGGTGCCCCAGGAACTCCTGACTGCTCTGGTGGGGGCCAACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR CAA 90 bp TCTGGTCAGCAGTCCTCTTACATTCAACAGGCGCAGCCCCGGCTCCCCAGCCCCCCTTCCCGCCGATCATaGCGCAGGCACTTGACCTTG +
Preference number: 5 (lower is better)
Translates to: SGQQSSYIQQAQPRLPSPPSRRS*RRHLTL
Trigger: CAAGGTCAAGTGCCTGCGCAATGATCGGCGGGAAGG...GGGGCTGGGGAGCCGGGGCTGCGCCTGTTGAATGTAAGAGGACTGCTGACCAGA
63% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR CAA 90 bp GAAACTGCTGGAGAGCCCTCCAGAGCAGGTGCTGCGGACCACAGACACTTGGCTCAGCCAGCTAGGGCTTaGCTCCAGGCTCCTCAGGCC +
Preference number: 5 (lower is better)
Translates to: ETAGEPSRAGAADHRHLAQPARA*LQAPQA
Trigger: GGCCTGAGGAGCCTGGAGCAAAGCCCTAGCTGGCTG...AGCCAAGTGTCTGTGGTCCGCAGCACCTGCTCTGGAGGGCTCTCCAGCAGTTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR CAA 90 bp GAGTGCTGCCGAGAGGACGCTGGTGAGAGTCAGGAGGCGAAACTGCTGGAGAGCGAGAAGCTGGCTGGGTaGCCCCCTCCTTCTGGAGGA +
Preference number: 5 (lower is better)
Translates to: ECCREDAGESQEAKLLESEKLAG*PPPSGG
Trigger: TCCTCCAGAAGGAGGGGGCAACCCAGCCAGCTTCTC...GCTCTCCAGCAGTTTCGCCTCCTGACTCTCACCAGCGTCCTCTCGGCAGCACTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS GCA 90 bp GGTGTTCACTTCGCAGTGGCTATCCAGAAAGGTGAGAACGGTAGCTaGAGCCACGTCCGCCCCACGCACTCGGGACCGGATCAGCCCTTC +
Preference number: 5 (lower is better)
Translates to: GVHFAVAIQKGENGS*SHVRPTHSGPDQPF
Trigger: GAAGGGCTGATCCGGTCCCGAGTGCGTGGGGCGGACGTGGCTGCAGCTACCGTTCTCACCTTTCTGGATAGCCACTGCGAAGTGAACACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337827.8
ENST00000448469.8
ENST00000553471.6
ENST00000553669.1
CDS CCA 90 bp AGTAGTAGAAAGTGCCCAGGATCCAGGCTACGGTCAGGATGGCGATaGCATTGGCGCGGATCTTCCTCATGGTGGGCAGACGGGCGCCCC +
Preference number: 5 (lower is better)
Translates to: SSRKCPGSRLRSGWR*HWRGSSSWWADGRP
Trigger: GGGGCGCCCGTCTGCCCACCATGAGGAAGATCCGCGCCAATGCCATCGCCATCCTGACCGTAGCCTGGATCCTGGGCACTTTCTACTACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337827.8
ENST00000448469.8
ENST00000553471.6
ENST00000554317.5
ENST00000555920.5
CDS CCA 90 bp CACAGATGGGCAGCTGTAATGGCGGGTGTCCCGGATGGGCCGGTCTaGGCTCAGCTTGTCACTCTCCAGCTGGTTGAAGGCGTGCTGTCT +
Preference number: 5 (lower is better)
Translates to: HRWAAVMAGVPDGPV*AQLVTLQLVEGVLS
Trigger: AGACAGCACGCCTTCAACCAGCTGGAGAGTGACAAGCTGAGCCCAGACCGGCCCATCCGGGACACCCGCCATTACAGCTGCCCATCTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337827.8
ENST00000448469.8
ENST00000553471.6
ENST00000553669.1
ENST00000553740.1
ENST00000555920.5
CDS-3UTR CAA 90 bp GGCCCGGATTCCAGAAGGCATTGGCAGTGGGATAGCTGGCTCATCCTGTCCTCCCGCAGCCCCAGCTGTTaGTTTTCGCTCGCGCCTAGC +
Preference number: 5 (lower is better)
Translates to: GPDSRRHWQWDSWLILSSRSPSC*FSLAPS
Trigger: GCTAGGCGCGAGCGAAAACAAACAGCTGGGGCTGCG...GGAGGACAGGATGAGCCAGCTATCCCACTGCCAATGCCTTCTGGAATCCGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR CAA 90 bp GAAGGGGCCTGCGCTGGCAAGTCCAGAGGGGTGCACTTGGGCACGGGAGTGCTGATCTCCTGGATCAAGTaGGCAGGAGTTCGGTTCAGG +
Preference number: 5 (lower is better)
Translates to: EGACAGKSRGVHLGTGVLISWIK*AGVRFR
Trigger: CCTGAACCGAACTCCTGCCAACTTGATCCAGGAGAT...CAGCACTCCCGTGCCCAAGTGCACCCCTCTGGACTTGCCAGCGCAGGCCCCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR CAA 90 bp GAAGGGGCCTGCGCTGGCAAGTCCAGAGGGGTGCACTTGGGCACGGGAGTGCTGCTCCTCCATTTCTGCTaGCCTTCTCTAGGGTTGCAC +
Preference number: 5 (lower is better)
Translates to: EGACAGKSRGVHLGTGVLLLHFC*PSLGLH
Trigger: GTGCAACCCTAGAGAAGGCAAGCAGAAATGGAGGAG...CAGCACTCCCGTGCCCAAGTGCACCCCTCTGGACTTGCCAGCGCAGGCCCCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR CAA 90 bp CAGGTGCTGCGGACCACAGACACTTGGCTGCTGACCCCAAGGGCCGTGTGGAGGGGTACCAACAGTCATTaGCCCAAGAGCCAGTGGGGT +
Preference number: 5 (lower is better)
Translates to: QVLRTTDTWLLTPRAVWRGTNSH*PKSQWG
Trigger: ACCCCACTGGCTCTTGGGCAAATGACTGTTGGTACC...CCTCCACACGGCCCTTGGGGTCAGCAGCCAAGTGTCTGTGGTCCGCAGCACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR CAA 90 bp CAGGGCTGCGTTGCCACAAAGGACCGGCTGATAAGTGCAGAGCCTGATCTGACCGCGGACCACAGACACTaGGCTGCTGACCCCAAGGGC +
Preference number: 5 (lower is better)
Translates to: QGCVATKDRLISAEPDLTADHRH*AADPKG
Trigger: GCCCTTGGGGTCAGCAGCCAAGTGTCTGTGGTCCGC...GGTCAGATCAGGCTCTGCACTTATCAGCCGGTCCTTTGTGGCAACGCAGCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR CAA 90 bp GCAGGGTGTGGGGATAGCAGGAGCAGTTCCAAGACAAGGCCGTGGGGTAGATGTGCGGACCACAGACACTaGGCTGCTGACCCCAAGGGC +
Preference number: 5 (lower is better)
Translates to: AGCGDSRSSSKTRPWGRCADHRH*AADPKG
Trigger: GCCCTTGGGGTCAGCAGCCAAGTGTCTGTGGTCCGC...ACATCTACCCCACGGCCTTGTCTTGGAACTGCTCCTGCTATCCCCACACCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR CAA 90 bp GTCCAGCACCCTGACCATCTCCTCTCCCGGGGCAAGGCCAGGACAGCACTGAGGTGTGGGCTTCTGTCCTaGCTTTCTCCGGGCAACAAG +
Preference number: 5 (lower is better)
Translates to: VQHPDHLLSRGKARTALRCGLLS*LSPGNK
Trigger: CTTGTTGCCCGGAGAAAGCAAGGACAGAAGCCCACA...CCTCAGTGCTGTCCTGGCCTTGCCCCGGGAGAGGAGATGGTCAGGGTGCTGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448469.8
CDS-3UTR CAA 90 bp CCTCCAGCAATGCCCAGCTGGAGAGAGTATGGCCATCCTCACCCCAGGGAGTCGCGTGGGCTCAAGGATTaGCCCTCAGAGAGGTGGGTG +
Preference number: 5 (lower is better)
Translates to: PPAMPSWREYGHPHPRESRGLKD*PSERWV
Trigger: CACCCACCTCTCTGAGGGCAAATCCTTGAGCCCACG...CGACTCCCTGGGGTGAGGATGGCCATACTCTCTCCAGCTGGGCATTGCTGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS TCA 90 bp CTCGGGACCGGATCAGCCCTTCCCGCCGATCATTGCGCAGGCACTTaGCCTTGGGGATCCTGGTCAGGAGTAGACAGTCTTCCGGATCTG +
Preference number: 5 (lower is better)
Translates to: LGTGSALPADHCAGT*PWGSWSGVDSLPDL
Trigger: CAGATCCGGAAGACTGTCTACTCCTGACCAGGATCCCCAAGGTCAAGTGCCTGCGCAATGATCGGCGGGAAGGGCTGATCCGGTCCCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337827.8
ENST00000448469.8
ENST00000553471.6
ENST00000553669.1
CDS GCA 90 bp CCCTCGGGCTGCTGGGCCTCTGGGCCAGAGGCAAGGAGACTCACCTaGTTGCCTTCTCTAGGGTTGCACATCTGCAGTATGACTGGGGAT +
Preference number: 5 (lower is better)
Translates to: PSGCWASGPEARRLT*LPSLGLHICSMTGD
Trigger: ATCCCCAGTCATACTGCAGATGTGCAACCCTAGAGAAGGCAAGCAGGTGAGTCTCCTTGCCTCTGGCCCAGAGGCCCAGCAGCCCGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553471.6
ENST00000553669.1
CDS CCA 90 bp CCCAGTGCTAGGAGAGTGCGGGTACGGCCCTTCCACATTTTTCGCTaGCCTGGGGCTCCCAGATTTCACGATGCTTCCCTCTATCCCGCC +
Preference number: 5 (lower is better)
Translates to: PSARRVRVRPFHIFR*PGAPRFHDASLYPA
Trigger: GGCGGGATAGAGGGAAGCATCGTGAAATCTGGGAGCCCCAGGCCAGCGAAAAATGTGGAAGGGCCGTACCCGCACTCTCCTAGCACTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554858.1
CDS CCA 90 bp GCACGCCAGGGAGGAAGATTAGGGGGTGGCAGCTTGGGCAGACAGTaGCTTCAATCCAGAGCAGAGGTTCAGGCCCGTCATGTGTGTGGC +
Preference number: 5 (lower is better)
Translates to: ARQGGRLGGGSLGRQ*LQSRAEVQARHVCG
Trigger: GCCACACACATGACGGGCCTGAACCTCTGCTCTGGATTGAAGCCACTGTCTGCCCAAGCTGCCACCCCCTAATCTTCCTCCCTGGCGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556829.1
CDS-3UTR CAA 90 bp GTGCCTGGCAGTGAAGACCTCTTCCCATTAGAGAAGCTGGCTGGGTTGCCCCCTCGCAGCCCCAGCTGTTaGTTTTCGCTCGCGCCTAGC +
Preference number: 5 (lower is better)
Translates to: VPGSEDLFPLEKLAGLPPRSPSC*FSLAPS
Trigger: GCTAGGCGCGAGCGAAAACAAACAGCTGGGGCTGCG...AGGGGGCAACCCAGCCAGCTTCTCTAATGGGAAGAGGTCTTCACTGCCAGGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR CAA 90 bp CCTCTTGAAGGCCCTCTGGTCAGCAGTCCTCTTACATTCAACAGGCGCAGCCCCGCAGGCGATGGCAGTTaGAGCACGCCAGGGAGGAAG +
Preference number: 5 (lower is better)
Translates to: PLEGPLVSSPLTFNRRSPAGDGS*STPGRK
Trigger: CTTCCTCCCTGGCGTGCTCAAACTGCCATCGCCTGC...GGGGCTGCGCCTGTTGAATGTAAGAGGACTGCTGACCAGAGGGCCTTCAAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR CAA 90 bp GTGGCTTCAATCCAGAGCAGAGGTTCAGGCCCTTTGGGGATCAGGGACCTCTTTTCCAGAGGGGTGCACTaGGGCACGGGAGTGCTGCCG +
Preference number: 5 (lower is better)
Translates to: VASIQSRGSGPLGIRDLFSRGVH*GTGVLP
Trigger: CGGCAGCACTCCCGTGCCCAAGTGCACCCCTCTGGA...AAAGAGGTCCCTGATCCCCAAAGGGCCTGAACCTCTGCTCTGGATTGAAGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS CCA 90 bp TCTGCAGCTGAGATTAGCCAGACCGGGCCCGCCCAGAGGAGGGATTaGAAGCTGGTGCACTTGACATTCGAAGAGCGCGAAGGGGAAACG +
Preference number: 5 (lower is better)
Translates to: SAAEISQTGPAQRRD*KLVHLTFEEREGET
Trigger: CGTTTCCCCTTCGCGCTCTTCGAATGTCAAGTGCACCAGCTTCCAATCCCTCCTCTGGGCGGGCCCGGTCTGGCTAATCTCAGCTGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554858.1
CDS-3UTR CAA 90 bp GTGCCTGGCAGTGAAGACCTCTTCCCATTAGAGAAGCTGGCTGGGTTGCCCCCTCGCAGGCACTTGACCTaGGGGATCCTGGTCAGGAGT +
Preference number: 5 (lower is better)
Translates to: VPGSEDLFPLEKLAGLPPRRHLT*GILVRS
Trigger: ACTCCTGACCAGGATCCCCAAGGTCAAGTGCCTGCG...AGGGGGCAACCCAGCCAGCTTCTCTAATGGGAAGAGGTCTTCACTGCCAGGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR CAA 90 bp CCTGGCTGCGGAAGAAACATCACGACAGAGGACAGGCAAAGCATGGCCCTGGGACGCAGGCACTTGACCTaGGGGATCCTGGTCAGGAGT +
Preference number: 5 (lower is better)
Translates to: PGCGRNITTEDRQSMALGRRHLT*GILVRS
Trigger: ACTCCTGACCAGGATCCCCAAGGTCAAGTGCCTGCG...TCCCAGGGCCATGCTTTGCCTGTCCTCTGTCGTGATGTTTCTTCCGCAGCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR CAA 90 bp GTCCAGCACCCTGACCATCTCCTCTCCCGGGGCAAGGCCAGGACAGCACTGAGGTACCAGCGGAAGGACTaGCAGTTCATCTTCTTCCTC +
Preference number: 5 (lower is better)
Translates to: VQHPDHLLSRGKARTALRYQRKD*QFIFFL
Trigger: GAGGAAGAAGATGAACTGCAAGTCCTTCCGCTGGTA...CCTCAGTGCTGTCCTGGCCTTGCCCCGGGAGAGGAGATGGTCAGGGTGCTGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448469.8
CDS-3UTR CAA 90 bp CGCTGGCAAGTCCAGAGGGGTGCACTTGGGCACGGGAGTGCTGCCGAGAGGACGTTGCCTTCTCTAGGGTaGCACATCTGCAGTATGACT +
Preference number: 5 (lower is better)
Translates to: RWQVQRGALGHGSAAERTLPSLG*HICSMT
Trigger: AGTCATACTGCAGATGTGCAACCCTAGAGAAGGCAA...CGTCCTCTCGGCAGCACTCCCGTGCCCAAGTGCACCCCTCTGGACTTGCCAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR CAA 90 bp GAAACTGCTGGAGAGCCCTCCAGAGCAGGTGCTGCGGACCACAGACACTTGGCTTTAGGGGGTGGCAGCTaGGGCAGACAGTGGCTTCAA +
Preference number: 5 (lower is better)
Translates to: ETAGEPSRAGAADHRHLALGGGS*GRQWLQ
Trigger: TTGAAGCCACTGTCTGCCCAAGCTGCCACCCCCTAA...AGCCAAGTGTCTGTGGTCCGCAGCACCTGCTCTGGAGGGCTCTCCAGCAGTTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR CAA 90 bp AAGGGGCCTGCGCTGGCAAGTCCAGAGGGGTGCACTTGGGCACGGGAGTGCTGCAAAGGGCCAGATGCTTaGCGATCAGGCTTCACAAAA +
Preference number: 5 (lower is better)
Translates to: KGPALASPEGCTWARECCKGPDA*RSGFTK
Trigger: TTTTGTGAAGCCTGATCGCAAAGCATCTGGCCCTTT...GCAGCACTCCCGTGCCCAAGTGCACCCCTCTGGACTTGCCAGCGCAGGCCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR CAA 90 bp TCCATCACACCAGGTCTGAGGCACAGGAGCCTCTCGGATACAGGAAACCCAGCTGCCCCAGAGGGGCAATaGAGTGGAGGCTTTGCTCGG +
Preference number: 5 (lower is better)
Translates to: SITPGLRHRSLSDTGNPAAPEGQ*SGGFAR
Trigger: CCGAGCAAAGCCTCCACTCAATTGCCCCTCTGGGGC...AGCTGGGTTTCCTGTATCCGAGAGGCTCCTGTGCCTCAGACCTGGTGTGATGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR CAA 90 bp CACCCCCTAGTGGGAAGCTGCCTTCTTTGTAGGGATGAAGTGTGGGGCCAGCAGGGAGCCTGGCAGGACTaGCAGGGGCAGAATGAATGG +
Preference number: 5 (lower is better)
Translates to: HPLVGSCLLCRDEVWGQQGAWQD*QGQNEW
Trigger: CCATTCATTCTGCCCCTGCAAGTCCTGCCAGGCTCC...CTGCTGGCCCCACACTTCATCCCTACAAAGAAGGCAGCTTCCCACTAGGGGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR CAA 90 bp CACCCCCTAGTGGGAAGCTGCCTTCTTTGTAGGGATGAAGTGTGGGGCCAGCAGGCTGGGGCTGAGGATTaGCCCTCTGCCTTAGATGGG +
Preference number: 5 (lower is better)
Translates to: HPLVGSCLLCRDEVWGQQAGAED*PSALDG
Trigger: CCCATCTAAGGCAGAGGGCAAATCCTCAGCCCCAGC...CTGCTGGCCCCACACTTCATCCCTACAAAGAAGGCAGCTTCCCACTAGGGGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS GCA 90 bp AGGATGCTGCGTGGGCTCGGTTGTCCTGCCATAAGTAGTAGAAAGTaGCCAGGATCCAGGCTACGGTCAGGATGGCGATGGCATTGGCGC +
Preference number: 5 (lower is better)
Translates to: RMLRGLGCPAISSRK*PGSRLRSGWRWHWR
Trigger: GCGCCAATGCCATCGCCATCCTGACCGTAGCCTGGATCCTGGGCACTTTCTACTACTTATGGCAGGACAACCGAGCCCACGCAGCATCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337827.8
ENST00000448469.8
ENST00000553471.6
ENST00000553669.1
ENST00000554317.5
ENST00000555920.5
CDS CCA 90 bp GCCATAAGTAGTAGAAAGTGCCCAGGATCCAGGCTACGGTCAGGATaGCGATGGCATTGGCGCGGATCTTCCTCATGGTGGGCAGACGGG +
Preference number: 5 (lower is better)
Translates to: AISSRKCPGSRLRSG*RWHWRGSSSWWADG
Trigger: CCCGTCTGCCCACCATGAGGAAGATCCGCGCCAATGCCATCGCCATCCTGACCGTAGCCTGGATCCTGGGCACTTTCTACTACTTATGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337827.8
ENST00000448469.8
ENST00000553471.6
ENST00000554317.5
ENST00000555920.5
CDS-3UTR CAA 90 bp TCCATCACACCAGGTCTGAGGCACAGGAGCCTCTCGGATACAGGAAACCCAGCTCGGTCTGGGCTCAGCTaGTCACTCTCCAGCTGGTTG +
Preference number: 5 (lower is better)
Translates to: SITPGLRHRSLSDTGNPARSGLS*SLSSWL
Trigger: CAACCAGCTGGAGAGTGACAAGCTGAGCCCAGACCG...AGCTGGGTTTCCTGTATCCGAGAGGCTCCTGTGCCTCAGACCTGGTGTGATGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR CAA 90 bp TCCATCACACCAGGTCTGAGGCACAGGAGCCTCTCGGATACAGGAAACCCAGCTCGCAGGCACTTGACCTaGGGGATCCTGGTCAGGAGT +
Preference number: 5 (lower is better)
Translates to: SITPGLRHRSLSDTGNPARRHLT*GILVRS
Trigger: ACTCCTGACCAGGATCCCCAAGGTCAAGTGCCTGCG...AGCTGGGTTTCCTGTATCCGAGAGGCTCCTGTGCCTCAGACCTGGTGTGATGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR CAA 90 bp CACCCCCTAGTGGGAAGCTGCCTTCTTTGTAGGGATGAAGTGTGGGGCCAGCAGTCATTGCGCAGGCACTaGACCTTGGGGATCCTGGTC +
Preference number: 5 (lower is better)
Translates to: HPLVGSCLLCRDEVWGQQSLRRH*TLGILV
Trigger: GACCAGGATCCCCAAGGTCAAGTGCCTGCGCAATGA...CTGCTGGCCCCACACTTCATCCCTACAAAGAAGGCAGCTTCCCACTAGGGGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR CAA 90 bp AAGGGGCCTGCGCTGGCAAGTCCAGAGGGGTGCACTTGGGCACGGGAGTGCTGCTGGTTAAACCAGGACTaGTCGATCACGAAGATTCCT +
Preference number: 5 (lower is better)
Translates to: KGPALASPEGCTWARECCWLNQD*SITKIP
Trigger: AGGAATCTTCGTGATCGACAAGTCCTGGTTTAACCA...GCAGCACTCCCGTGCCCAAGTGCACCCCTCTGGACTTGCCAGCGCAGGCCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR CAA 90 bp CAATCTCAGGGCTTCTTGACTCTCCAGGCCACTCAATTCTGGGCTTGTCTGAGAGCGGGCTGCGGGTTCTaGGCAGACCCTCTGCAGATC +
Preference number: 5 (lower is better)
Translates to: QSQGFLTLQATQFWACLRAGCGF*ADPLQI
Trigger: GATCTGCAGAGGGTCTGCCAAGAACCCGCAGCCCGC...TCTCAGACAAGCCCAGAATTGAGTGGCCTGGAGAGTCAAGAAGCCCTGAGATTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR CAA 90 bp GAAGGGGCCTGCGCTGGCAAGTCCAGAGGGGTGCACTTGGGCACGGGAGTGCTGCAGGGCAATACCTATTaGGAGAAGCAATTTGCTTTC +
Preference number: 5 (lower is better)
Translates to: EGACAGKSRGVHLGTGVLQGNTY*EKQFAF
Trigger: GAAAGCAAATTGCTTCTCCAAATAGGTATTGCCCTG...CAGCACTCCCGTGCCCAAGTGCACCCCTCTGGACTTGCCAGCGCAGGCCCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR CAA 90 bp GGTCTGCTTTGTAGGGGAGACCCCCAGGGTCCTGGTACCAACAGTCATTTGCCCTGTACCACTGCCTTCTaGTGTGGTAGAGCAGGGGAG +
Preference number: 5 (lower is better)
Translates to: GLLCRGDPQGPGTNSHLPCTTAF*CGRAGE
Trigger: CTCCCCTGCTCTACCACACAAGAAGGCAGTGGTACA...GGGCAAATGACTGTTGGTACCAGGACCCTGGGGGTCTCCCCTACAAAGCAGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR CAA 90 bp GTAGGCGGTGGGTGGTGGGCTGTGCTCCCTGAGAGGACGGAGGGGTGGATGGGGACACTGAGAACATTGTaGGCAATGAAATTACAGACG +
Preference number: 5 (lower is better)
Translates to: VGGGWWAVLPERTEGWMGTLRTL*AMKLQT
Trigger: CGTCTGTAATTTCATTGCCAACAATGTTCTCAGTGT...CCCCATCCACCCCTCCGTCCTCTCAGGGAGCACAGCCCACCACCCACCGCCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR CAA 90 bp CACCCCCTAGTGGGAAGCTGCCTTCTTTGTAGGGATGAAGTGTGGGGCCAGCAGAGGAGACTCACCTGCTaGCCTTCTCTAGGGTTGCAC +
Preference number: 5 (lower is better)
Translates to: HPLVGSCLLCRDEVWGQQRRLTC*PSLGLH
Trigger: GTGCAACCCTAGAGAAGGCAAGCAGGTGAGTCTCCT...CTGCTGGCCCCACACTTCATCCCTACAAAGAAGGCAGCTTCCCACTAGGGGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR CAA 90 bp GAAACTGCTGGAGAGCCCTCCAGAGCAGGTGCTGCGGACCACAGACACTTGGCTTGTCATGGTGGGTATTaGCTGATGGTCCTGGCAGAA +
Preference number: 5 (lower is better)
Translates to: ETAGEPSRAGAADHRHLACHGGY*LMVLAE
Trigger: TTCTGCCAGGACCATCAGCAAATACCCACCATGACA...AGCCAAGTGTCTGTGGTCCGCAGCACCTGCTCTGGAGGGCTCTCCAGCAGTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448469.8
CDS-3UTR CAA 90 bp GTGGCTTCAATCCAGAGCAGAGGTTCAGGCCCTTTGGGGATCAGGGACCTCTTTTCCCTCTGCAGCCTCTaGCTAAGAATGTGGGCACCC +
Preference number: 5 (lower is better)
Translates to: VASIQSRGSGPLGIRDLFSLCSL*LRMWAP
Trigger: GGGTGCCCACATTCTTAGCAAGAGGCTGCAGAGGGA...AAAGAGGTCCCTGATCCCCAAAGGGCCTGAACCTCTGCTCTGGATTGAAGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448469.8
CDS-3UTR CAA 90 bp CTTGGACATCACTGTGTCTGGAGCTCAGTTTCCCTAGTCTGCCAACAGTCAAGAAGCAGCCTCTGGGCCTaGGGTCCCATTCCCTGGGTG +
Preference number: 5 (lower is better)
Translates to: LGHHCVWSSVSLVCQQSRSSLWA*GPIPWV
Trigger: CACCCAGGGAATGGGACCCAAGGCCCAGAGGCTGCT...TCTTGACTGTTGGCAGACTAGGGAAACTGAGCTCCAGACACAGTGATGTCCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR CAA 90 bp GCTCAAGGATTTGCCCTCAGAGAGGTGGGTGCTCTAGGTGCAGGAGACACTGCAGAAACCCAGCTAGCCTaGGAAATAGGACCAGCAGGG +
Preference number: 5 (lower is better)
Translates to: AQGFALREVGALGAGDTAETQLA*EIGPAG
Trigger: CCCTGCTGGTCCTATTTCCAAGGCTAGCTGGGTTTC...TGCAGTGTCTCCTGCACCTAGAGCACCCACCTCTCTGAGGGCAAATCCTTGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS GCA 90 bp GAGGCAAGGAGACTCACCTGCTTGCCTTCTCTAGGGTTGCACATCTaGAGTATGACTGGGGATCCAGGGGAGGACATTAAGGTGGAGGTG +
Preference number: 5 (lower is better)
Translates to: EARRLTCLPSLGLHI*SMTGDPGEDIKVEV
Trigger: CACCTCCACCTTAATGTCCTCCCCTGGATCCCCAGTCATACTGCAGATGTGCAACCCTAGAGAAGGCAAGCAGGTGAGTCTCCTTGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553471.6
ENST00000553669.1
CDS-3UTR CAA 90 bp GCTCAAGGATTTGCCCTCAGAGAGGTGGGTGCTCTAGGTGCAGGAGACACTGCAATCTCCTGGATCAAGTaGGCAGGAGTTCGGTTCAGG +
Preference number: 5 (lower is better)
Translates to: AQGFALREVGALGAGDTAISWIK*AGVRFR
Trigger: CCTGAACCGAACTCCTGCCAACTTGATCCAGGAGAT...TGCAGTGTCTCCTGCACCTAGAGCACCCACCTCTCTGAGGGCAAATCCTTGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR CAA 90 bp GCCGGAGGGAGAGGCTGTGGCTGCTTTCCAGAATGGCACAGCAAACTGCTGTTCTACCAGCGGAAGGACTaGCAGTTCATCTTCTTCCTC +
Preference number: 5 (lower is better)
Translates to: AGGRGCGCFPEWHSKLLFYQRKD*QFIFFL
Trigger: GAGGAAGAAGATGAACTGCAAGTCCTTCCGCTGGTA...GAACAGCAGTTTGCTGTGCCATTCTGGAAAGCAGCCACAGCCTCTCCCTCCGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR CAA 90 bp TTGGCCTATGAAAGACAGGGGGCTCCTGTGGTAGGTATATCTGCCCCAGGCTGGCTCCTCCATTTCTGCTaGCCTTCTCTAGGGTTGCAC +
Preference number: 5 (lower is better)
Translates to: LAYERQGAPVVGISAPGWLLHFC*PSLGLH
Trigger: GTGCAACCCTAGAGAAGGCAAGCAGAAATGGAGGAG...CCAGCCTGGGGCAGATATACCTACCACAGGAGCCCCCTGTCTTTCATAGGCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR CAA 90 bp CAGGGCTGCGTTGCCACAAAGGACCGGCTGATAAGTGCAGAGCCTGATCTGACCCACAGAAAATGGGCTTaGGGAGAGGTAGGTTTGGAG +
Preference number: 5 (lower is better)
Translates to: QGCVATKDRLISAEPDLTHRKWA*GEVGLE
Trigger: CTCCAAACCTACCTCTCCCAAAGCCCATTTTCTGTG...GGTCAGATCAGGCTCTGCACTTATCAGCCGGTCCTTTGTGGCAACGCAGCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR CAA 90 bp GAGAAGCTGGCTGGGTTGCCCCCTCCTTCTGGAGGAGCACTGACTCAGACCATCGGGACGACAGTCATATaGTCCAGGTTATTTCTCCCA +
Preference number: 5 (lower is better)
Translates to: EKLAGLPPPSGGALTQTIGTTVI*SRLFLP
Trigger: TGGGAGAAATAACCTGGACAATATGACTGTCGTCCC...GATGGTCTGAGTCAGTGCTCCTCCAGAAGGAGGGGGCAACCCAGCCAGCTTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR CAA 90 bp GTGGCTTCAATCCAGAGCAGAGGTTCAGGCCCTTTGGGGATCAGGGACCTCTTTAGAGACCACACACTATaGTCCCAGCCCCAAGAAGCG +
Preference number: 5 (lower is better)
Translates to: VASIQSRGSGPLGIRDLFRDHTL*SQPQEA
Trigger: CGCTTCTTGGGGCTGGGACAATAGTGTGTGGTCTCT...AAAGAGGTCCCTGATCCCCAAAGGGCCTGAACCTCTGCTCTGGATTGAAGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448469.8
CDS-3UTR CAA 90 bp TACGGAAGTGCCTGGGTGGAGGATGGAGTGTTGCTTGGAACATTTATGAGAAGGCACCCTCCTCACTGCTaGCACCGACTGAGGCAGGCT +
Preference number: 5 (lower is better)
Translates to: YGSAWVEDGVLLGTFMRRHPPHC*HRLRQA
Trigger: AGCCTGCCTCAGTCGGTGCAAGCAGTGAGGAGGGTG...CCTTCTCATAAATGTTCCAAGCAACACTCCATCCTCCACCCAGGCACTTCCGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS TCA 90 bp TCACAAACAGGAGCCACAGCCAGCCTCCCAGCACAGTGCAATAGCTaGCCCTTCAAGAAAATCCCTCCGTCATGTGTGTGGCAACAGCTG +
Preference number: 5 (lower is better)
Translates to: SQTGATASLPAQCNS*PFKKIPPSCVWQQL
Trigger: CAGCTGTTGCCACACACATGACGGAGGGATTTTCTTGAAGGGTCAGCTATTGCACTGTGCTGGGAGGCTGGCTGTGGCTCCTGTTTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR CAA 90 bp GTTCATCCTTGTGGCCAACATGATCTGTACATTCTCTGGCACAAGGTAGGCACCCCTTCCCGCCGATCATaGCGCAGGCACTTGACCTTG +
Preference number: 5 (lower is better)
Translates to: VHPCGQHDLYILWHKVGTPSRRS*RRHLTL
Trigger: CAAGGTCAAGTGCCTGCGCAATGATCGGCGGGAAGG...GGTGCCTACCTTGTGCCAGAGAATGTACAGATCATGTTGGCCACAAGGATGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR CAA 90 bp GTGGCTTCAATCCAGAGCAGAGGTTCAGGCCCTTTGGGGATCAGGGACCTCTTTTGGGTATGTGGATCCTaGGCCTATGAAAGACAGGGG +
Preference number: 5 (lower is better)
Translates to: VASIQSRGSGPLGIRDLFWVCGS*AYERQG
Trigger: CCCCTGTCTTTCATAGGCCAAGGATCCACATACCCA...AAAGAGGTCCCTGATCCCCAAAGGGCCTGAACCTCTGCTCTGGATTGAAGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR CAA 90 bp GTGCCTGGCAGTGAAGACCTCTTCCCATTAGAGAAGCTGGCTGGGTTGCCCCCTTGGTTAAACCAGGACTaGTCGATCACGAAGATTCCT +
Preference number: 5 (lower is better)
Translates to: VPGSEDLFPLEKLAGLPPWLNQD*SITKIP
Trigger: AGGAATCTTCGTGATCGACAAGTCCTGGTTTAACCA...AGGGGGCAACCCAGCCAGCTTCTCTAATGGGAAGAGGTCTTCACTGCCAGGCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR CAA 90 bp GGTCTGCTTTGTAGGGGAGACCCCCAGGGTCCTGGTACCAACAGTCATTTGCCCAGAGACCTTGTTCTTTaGGTGCTTTGCTGCTCTTCT +
Preference number: 5 (lower is better)
Translates to: GLLCRGDPQGPGTNSHLPRDLVL*VLCCSS
Trigger: AGAAGAGCAGCAAAGCACCAAAAGAACAAGGTCTCT...GGGCAAATGACTGTTGGTACCAGGACCCTGGGGGTCTCCCCTACAAAGCAGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448469.8
CDS-3UTR CAA 90 bp GAGAGGTCTCAGCCTGACACATGGCCAAATAGAAGTGGAGTCTGTTTAATAAACTCTGGGGAGAGGCCTTaGCCCTGGGCCCAGTTCTGT +
Preference number: 5 (lower is better)
Translates to: ERSQPDTWPNRSGVCLINSGERP*PWAQFC
Trigger: ACAGAACTGGGCCCAGGGCAAAGGCCTCTCCCCAGA...GTTTATTAAACAGACTCCACTTCTATTTGGCCATGTGTCAGGCTGAGACCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448469.8
CDS-3UTR CAA 90 bp GTCCGCACCCCTAGTACACTCTTCTCCACGCTTCACAGGGCTGAATTAAGCAGGATGTCCTGCCTGAATTaGTACCACTGCCTTCTTGTG +
Preference number: 5 (lower is better)
Translates to: VRTPSTLFSTLHRAELSRMSCLN*YHCLLV
Trigger: CACAAGAAGGCAGTGGTACAAATTCAGGCAGGACAT...CCTGCTTAATTCAGCCCTGTGAAGCGTGGAGAAGAGTGTACTAGGGGTGCGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR CAA 90 bp GTGGCTTCAATCCAGAGCAGAGGTTCAGGCCCTTTGGGGATCAGGGACCTCTTTGGTGGGGGTTTTCCATaGGTTTCCATGGGAACATTA +
Preference number: 5 (lower is better)
Translates to: VASIQSRGSGPLGIRDLFGGGFP*VSMGTL
Trigger: TAATGTTCCCATGGAAACCAATGGAAAACCCCCACC...AAAGAGGTCCCTGATCCCCAAAGGGCCTGAACCTCTGCTCTGGATTGAAGCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR CAA 90 bp TTGGCCTATGAAAGACAGGGGGCTCCTGTGGTAGGTATATCTGCCCCAGGCTGGATTAAGCAGGAGAAATaGTCCTCAGATGGCTCTGGA +
Preference number: 5 (lower is better)
Translates to: LAYERQGAPVVGISAPGWIKQEK*SSDGSG
Trigger: TCCAGAGCCATCTGAGGACAATTTCTCCTGCTTAAT...CCAGCCTGGGGCAGATATACCTACCACAGGAGCCCCCTGTCTTTCATAGGCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR CAA 90 bp GGTCTGCTTTGTAGGGGAGACCCCCAGGGTCCTGGTACCAACAGTCATTTGCCCTGTTCTTTTGGTGCTTaGCTGCTCTTCTATCCATGT +
Preference number: 5 (lower is better)
Translates to: GLLCRGDPQGPGTNSHLPCSFGA*LLFYPC
Trigger: ACATGGATAGAAGAGCAGCAAAGCACCAAAAGAACA...GGGCAAATGACTGTTGGTACCAGGACCCTGGGGGTCTCCCCTACAAAGCAGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000448469.8
CDS-3UTR CAA 90 bp TACGGAAGTGCCTGGGTGGAGGATGGAGTGTTGCTTGGAACATTTATGAGAAGGGCTGGTCATGCCAGCTaGGACATCACTGTGTCTGGA +
Preference number: 5 (lower is better)
Translates to: YGSAWVEDGVLLGTFMRRAGHAS*DITVSG
Trigger: TCCAGACACAGTGATGTCCAAGCTGGCATGACCAGC...CCTTCTCATAAATGTTCCAAGCAACACTCCATCCTCCACCCAGGCACTTCCGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR CAA 90 bp CAATCTCAGGGCTTCTTGACTCTCCAGGCCACTCAATTCTGGGCTTGTCTGAGAGCATCACTTTCTTCCTaGACCCTGACCTGTCTCCCA +
Preference number: 5 (lower is better)
Translates to: QSQGFLTLQATQFWACLRASLSS*TLTCLP
Trigger: TGGGAGACAGGTCAGGGTCAAGGAAGAAAGTGATGC...TCTCAGACAAGCCCAGAATTGAGTGGCCTGGAGAGTCAAGAAGCCCTGAGATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR CAA 90 bp CAATCTCAGGGCTTCTTGACTCTCCAGGCCACTCAATTCTGGGCTTGTCTGAGACAATCTCAGGGCTTCTaGACTCTCCAGGCCACTCAA +
Preference number: 5 (lower is better)
Translates to: QSQGFLTLQATQFWACLRQSQGF*TLQATQ
Trigger: TTGAGTGGCCTGGAGAGTCAAGAAGCCCTGAGATTG...TCTCAGACAAGCCCAGAATTGAGTGGCCTGGAGAGTCAAGAAGCCCTGAGATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR CAA 90 bp GGCTCTTGCTTTTCTGTAGTTTGCAGAAGTTCCTGTCCAGATCAGAGGAGGAGGCCTATTTGCCTCCCATaGCAACCACCTCCCCTCTTC +
Preference number: 5 (lower is better)
Translates to: GSCFSVVCRSSCPDQRRRPICLP*QPPPLF
Trigger: GAAGAGGGGAGGTGGTTGCAATGGGAGGCAAATAGG...CCTCCTCCTCTGATCTGGACAGGAACTTCTGCAAACTACAGAAAAGCAAGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR CAA 90 bp CAATCTCAGGGCTTCTTGACTCTCCAGGCCACTCAATTCTGGGCTTGTCTGAGAGGGTTTCTCTCCTATTaGCCTCCCATTGCAACCACC +
Preference number: 5 (lower is better)
Translates to: QSQGFLTLQATQFWACLRGFLSY*PPIATT
Trigger: GGTGGTTGCAATGGGAGGCAAATAGGAGAGAAACCC...TCTCAGACAAGCCCAGAATTGAGTGGCCTGGAGAGTCAAGAAGCCCTGAGATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR CAA 90 bp CAAATTCCCTGGGGGTCAAGGACCATGTCCGTTCATCCTTGTGGCCAACATGATCTTACATGGCATCAGTaGCTGGGGCTGAGGATTTGC +
Preference number: 5 (lower is better)
Translates to: QIPWGSRTMSVHPCGQHDLTWHQ*LGLRIC
Trigger: GCAAATCCTCAGCCCCAGCAACTGATGCCATGTAAG...ATCATGTTGGCCACAAGGATGAACGGACATGGTCCTTGACCCCCAGGGAATTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR CAA 90 bp AATGCCCGAGAGAGAGGTCTCAGCCTGACACATGGCCAAATAGAAGTGGAGTCTCAAATTACCCATCCTTaGCTGCCAAGACACCATCCG +
Preference number: 5 (lower is better)
Translates to: NARERGLSLTHGQIEVESQITHP*LPRHHP
Trigger: CGGATGGTGTCTTGGCAGCAAAGGATGGGTAATTTG...AGACTCCACTTCTATTTGGCCATGTGTCAGGCTGAGACCTCTCTCTCGGGCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448469.8
CDS TCA 90 bp CACGATGCTTCCCTCTATCCCGCCTCATTGACCCCTGGACAACCCTaGAATATCATCGTCAGCATTATTTCATCGGAAAGAAGGGCAGCA +
Preference number: 5 (lower is better)
Translates to: HDASLYPASLTPGQP*NIIVSIISSERRAA
Trigger: TGCTGCCCTTCTTTCCGATGAAATAATGCTGACGATGATATTTCAGGGTTGTCCAGGGGTCAATGAGGCGGGATAGAGGGAAGCATCGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554858.1
CDS TCA 90 bp CTGGGGCTCCCAGATTTCACGATGCTTCCCTCTATCCCGCCTCATTaGCCCCTGGACAACCCTGAAATATCATCGTCAGCATTATTTCAT +
Preference number: 5 (lower is better)
Translates to: LGLPDFTMLPSIPPH*PLDNPEISSSALFH
Trigger: ATGAAATAATGCTGACGATGATATTTCAGGGTTGTCCAGGGGTCAATGAGGCGGGATAGAGGGAAGCATCGTGAAATCTGGGAGCCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554858.1
CDS-3UTR CAA 90 bp TCTGCTACCCAATCAAGCAAAGCTGGTCTGGTAAGACTCTTTTCAGAATTATTTGCGGGCTGCGGGTTCTaGGCAGACCCTCTGCAGATC +
Preference number: 5 (lower is better)
Translates to: SATQSSKAGLVRLFSELFAGCGF*ADPLQI
Trigger: GATCTGCAGAGGGTCTGCCAAGAACCCGCAGCCCGC...AAATAATTCTGAAAAGAGTCTTACCAGACCAGCTTTGCTTGATTGGGTAGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR CAA 90 bp CAAATTCCCTGGGGGTCAAGGACCATGTCCGTTCATCCTTGTGGCCAACATGATTTTGAACTGTGGTGGTaGTCAGGAGCTAGGGATACA +
Preference number: 5 (lower is better)
Translates to: QIPWGSRTMSVHPCGQHDFELWW*SGARDT
Trigger: TGTATCCCTAGCTCCTGACAACCACCACAGTTCAAA...ATCATGTTGGCCACAAGGATGAACGGACATGGTCCTTGACCCCCAGGGAATTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR CAA 90 bp CAAATTCCCTGGGGGTCAAGGACCATGTCCGTTCATCCTTGTGGCCAACATGATTGGTTAAACCAGGACTaGTCGATCACGAAGATTCCT +
Preference number: 5 (lower is better)
Translates to: QIPWGSRTMSVHPCGQHDWLNQD*SITKIP
Trigger: AGGAATCTTCGTGATCGACAAGTCCTGGTTTAACCA...ATCATGTTGGCCACAAGGATGAACGGACATGGTCCTTGACCCCCAGGGAATTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR CAA 90 bp AGGCTGAGAGATGAAATAACTTATTCAAGAGCTCAGTCAGGCGCAGTGGCTCACTACCAGCGGAAGGACTaGCAGTTCATCTTCTTCCTC +
Preference number: 5 (lower is better)
Translates to: RLRDEITYSRAQSGAVAHYQRKD*QFIFFL
Trigger: GAGGAAGAAGATGAACTGCAAGTCCTTCCGCTGGTA...GTGAGCCACTGCGCCTGACTGAGCTCTTGAATAAGTTATTTCATCTCTCAGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR CAA 90 bp CAGTCATGCCCCTCATTTAAATCAGGCTGTGTGTTCCTATGTAAGAGGCTGCCCTTGCCTTCTCTAGGGTaGCACATCTGCAGTATGACT +
Preference number: 5 (lower is better)
Translates to: QSCPSFKSGCVFLCKRLPLPSLG*HICSMT
Trigger: AGTCATACTGCAGATGTGCAACCCTAGAGAAGGCAA...GGGCAGCCTCTTACATAGGAACACACAGCCTGATTTAAATGAGGGGCATGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR CAA 90 bp GCTCAAGGATTTGCCCTCAGAGAGGTGGGTGCTCTAGGTGCAGGAGACACTGCATATTTACAATTTAGCTaGGTTGCCACGTGCAAATCT +
Preference number: 5 (lower is better)
Translates to: AQGFALREVGALGAGDTAYLQFS*VATCKS
Trigger: AGATTTGCACGTGGCAACCAAGCTAAATTGTAAATA...TGCAGTGTCTCCTGCACCTAGAGCACCCACCTCTCTGAGGGCAAATCCTTGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR CAA 90 bp AGGACAGGGCTAGACTTGAGCATGTTCAGTTTCACTTTTACAGAAAGGAGGCCCGTCTTTTACAGTGACTaGCTCCTAAGCCCAGACCAA +
Preference number: 5 (lower is better)
Translates to: RTGLDLSMFSFTFTERRPVFYSD*LLSPDQ
Trigger: TTGGTCTGGGCTTAGGAGCAAGTCACTGTAAAAGAC...GGGCCTCCTTTCTGTAAAAGTGAAACTGAACATGCTCAAGTCTAGCCCTGTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR CAA 90 bp GTCCGCACCCCTAGTACACTCTTCTCCACGCTTCACAGGGCTGAATTAAGCAGGAACACACTGAGAACATaGTTGGCAATGAAATTACAG +
Preference number: 5 (lower is better)
Translates to: VRTPSTLFSTLHRAELSRNTLRT*LAMKLQ
Trigger: CTGTAATTTCATTGCCAACAATGTTCTCAGTGTGTT...CCTGCTTAATTCAGCCCTGTGAAGCGTGGAGAAGAGTGTACTAGGGGTGCGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR CAA 90 bp CTTGGACATCACTGTGTCTGGAGCTCAGTTTCCCTAGTCTGCCAACAGTCAAGACCAGTGACATTTTGTTaGTTTGAGACTGAGTCTCGC +
Preference number: 5 (lower is better)
Translates to: LGHHCVWSSVSLVCQQSRPVTFC*FETESR
Trigger: GCGAGACTCAGTCTCAAACAAACAAAATGTCACTGG...TCTTGACTGTTGGCAGACTAGGGAAACTGAGCTCCAGACACAGTGATGTCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR CAA 90 bp ACATGTAAGAAGTGGTTTTATTCCAGGTGTGTGTTTCATAAAGACGAGGTCCTCGGTACCAACAGTCATTaGCCCAAGAGCCAGTGGGGT +
Preference number: 5 (lower is better)
Translates to: TCKKWFYSRCVFHKDEVLGTNSH*PKSQWG
Trigger: ACCCCACTGGCTCTTGGGCAAATGACTGTTGGTACC...GAGGACCTCGTCTTTATGAAACACACACCTGGAATAAAACCACTTCTTACATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS-3UTR CAA 90 bp TTCTTTTGGTGCTTTGCTGCTCTTCTATCCATGTTCATTTGCAAATTACCCATCTTAGGGGGTGGCAGCTaGGGCAGACAGTGGCTTCAA +
Preference number: 5 (lower is better)
Translates to: FFWCFAALLSMFICKLPILGGGS*GRQWLQ
Trigger: TTGAAGCCACTGTCTGCCCAAGCTGCCACCCCCTAA...GATGGGTAATTTGCAAATGAACATGGATAGAAGAGCAGCAAAGCACCAAAAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448469.8
CDS-3UTR CAA 90 bp TTGCTGTTTTTACCCAGGAAGTATGTCCTGCCTGAATTTGTACCACTGCCTTCTAGGACAGGGCTAGACTaGAGCATGTTCAGTTTCACT +
Preference number: 5 (lower is better)
Translates to: LLFLPRKYVLPEFVPLPSRTGLD*SMFSFT
Trigger: AGTGAAACTGAACATGCTCAAGTCTAGCCCTGTCCT...AGAAGGCAGTGGTACAAATTCAGGCAGGACATACTTCCTGGGTAAAAACAGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR CAA 90 bp GTTCATCCTTGTGGCCAACATGATCTGTACATTCTCTGGCACAAGGTAGGCACCAAAGCTAACACTTATTaGAACTGTGGTGGTTGTCAG +
Preference number: 5 (lower is better)
Translates to: VHPCGQHDLYILWHKVGTKANTY*NCGGCQ
Trigger: CTGACAACCACCACAGTTCAAATAAGTGTTAGCTTT...GGTGCCTACCTTGTGCCAGAGAATGTACAGATCATGTTGGCCACAAGGATGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR CAA 90 bp TCTGCTACCCAATCAAGCAAAGCTGGTCTGGTAAGACTCTTTTCAGAATTATTTATCTCCTGGATCAAGTaGGCAGGAGTTCGGTTCAGG +
Preference number: 5 (lower is better)
Translates to: SATQSSKAGLVRLFSELFISWIK*AGVRFR
Trigger: CCTGAACCGAACTCCTGCCAACTTGATCCAGGAGAT...AAATAATTCTGAAAAGAGTCTTACCAGACCAGCTTTGCTTGATTGGGTAGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR CAA 90 bp TCTGCTACCCAATCAAGCAAAGCTGGTCTGGTAAGACTCTTTTCAGAATTATTTTGGGTATGTGGATCCTaGGCCTATGAAAGACAGGGG +
Preference number: 5 (lower is better)
Translates to: SATQSSKAGLVRLFSELFWVCGS*AYERQG
Trigger: CCCCTGTCTTTCATAGGCCAAGGATCCACATACCCA...AAATAATTCTGAAAAGAGTCTTACCAGACCAGCTTTGCTTGATTGGGTAGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS-3UTR CAA 90 bp ACATGTAAGAAGTGGTTTTATTCCAGGTGTGTGTTTCATAAAGACGAGGTCCTCTTCCCAGCAGGGCTCTaGCTTTTCTGTAGTTTGCAG +
Preference number: 5 (lower is better)
Translates to: TCKKWFYSRCVFHKDEVLFPAGL*LFCSLQ
Trigger: CTGCAAACTACAGAAAAGCAAGAGCCCTGCTGGGAA...GAGGACCTCGTCTTTATGAAACACACACCTGGAATAAAACCACTTCTTACATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR CAA 90 bp ACATGTAAGAAGTGGTTTTATTCCAGGTGTGTGTTTCATAAAGACGAGGTCCTCTTGCCTTCTCTAGGGTaGCACATCTGCAGTATGACT +
Preference number: 5 (lower is better)
Translates to: TCKKWFYSRCVFHKDEVLLPSLG*HICSMT
Trigger: AGTCATACTGCAGATGTGCAACCCTAGAGAAGGCAA...GAGGACCTCGTCTTTATGAAACACACACCTGGAATAAAACCACTTCTTACATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337827.8
ENST00000448469.8
ENST00000553471.6
CDS-3UTR CAA 90 bp ACATGTAAGAAGTGGTTTTATTCCAGGTGTGTGTTTCATAAAGACGAGGTCCTCTCCACATCTTGGTTCTaGCGGATTCCTTGTGAGGTA +
Preference number: 5 (lower is better)
Translates to: TCKKWFYSRCVFHKDEVLSTSWF*RIPCEV
Trigger: TACCTCACAAGGAATCCGCAAGAACCAAGATGTGGA...GAGGACCTCGTCTTTATGAAACACACACCTGGAATAAAACCACTTCTTACATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS-3UTR CAA 90 bp ACATGTAAGAAGTGGTTTTATTCCAGGTGTGTGTTTCATAAAGACGAGGTCCTCCACTCAATTCTGGGCTaGTCTGAGAAACAATGTCAC +
Preference number: 5 (lower is better)
Translates to: TCKKWFYSRCVFHKDEVLHSILG*SEKQCH
Trigger: GTGACATTGTTTCTCAGACAAGCCCAGAATTGAGTG...GAGGACCTCGTCTTTATGAAACACACACCTGGAATAAAACCACTTCTTACATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS GCA 72 bp GGTGCGGTCCTCGCGGAGCTGCTCCGACCTCCTGCCTaGCCTCTGCGCGCCCCGGCCGCCGGAGGATGCTGC +
Preference number: 6 (lower is better)
Translates to: GAVLAELLRPPA*PLRAPAAGGCC
Trigger: GCAGCATCCTCCGGCGGCCGGGGCGCGCAGAGGGCAGGCAGGAGGTCGGAGCAGCTCCGCGAGGACCGCACC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337827.8
ENST00000448469.8
ENST00000553471.6
ENST00000553669.1
ENST00000554317.5
ENST00000555920.5
CDS GCA 72 bp GGATGGTGCGGTCCTCGCGGAGCTGCTCCGACCTCCTaGCTGCCCTCTGCGCGCCCCGGCCGCCGGAGGATG +
Preference number: 6 (lower is better)
Translates to: GWCGPRGAAPTS*LPSARPGRRRM
Trigger: CATCCTCCGGCGGCCGGGGCGCGCAGAGGGCAGGCAGGAGGTCGGAGCAGCTCCGCGAGGACCGCACCATCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337827.8
ENST00000448469.8
ENST00000553471.6
ENST00000553669.1
ENST00000554317.5
ENST00000555920.5
CDS CCA 72 bp CTTGAGTCACCGACTGGAGACGCGCGACCCCCGACCTaGGCCCGCGCCGCGAGCTGCAGTTCCGGGCTGCGC +
Preference number: 6 (lower is better)
Translates to: LESPTGDARPPT*ARAASCSSGLR
Trigger: GCGCAGCCCGGAACTGCAGCTCGCGGCGCGGGCCCAGGTCGGGGGTCGCGCGTCTCCAGTCGGTGACTCAAG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554317.5
CDS TCA 72 bp GCGCCTAGCTGCTCAGTCCCCCGGACCGAGCGGCCTTaGGTCACCGACTGGAGACGCGCGACCCCCGACCTG +
Preference number: 6 (lower is better)
Translates to: APSCSVPRTERP*VTDWRRATPDL
Trigger: CAGGTCGGGGGTCGCGCGTCTCCAGTCGGTGACTCAAGGCCGCTCGGTCCGGGGGACTGAGCAGCTAGGCGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000554317.5
CDS GCA 72 bp GTCACAATGAGCGGGATGGTGCGGTCCTCGCGGAGCTaGTCCGACCTCCTGCCTGCCCTCTGCGCGCCCCGG +
Preference number: 6 (lower is better)
Translates to: VTMSGMVRSSRS*SDLLPALCAPR
Trigger: CCGGGGCGCGCAGAGGGCAGGCAGGAGGTCGGAGCAGCTCCGCGAGGACCGCACCATCCCGCTCATTGTGAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337827.8
ENST00000448469.8
ENST00000553471.6
ENST00000553669.1
ENST00000554317.5
ENST00000555920.5
CDS GCA 72 bp CGACCTGGGCCCGCGCCGCGAGCTGCAGTTCCGGGCTaGGCTCTGGCGCGGGATTCAAGGTGTGTTCGGCGA +
Preference number: 6 (lower is better)
Translates to: RPGPAPRAAVPG*ALARDSRCVRR
Trigger: TCGCCGAACACACCTTGAATCCCGCGCCAGAGCGCAGCCCGGAACTGCAGCTCGCGGCGCGGGCCCAGGTCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554317.5
CDS GCA 72 bp AGTCCTGGGCCCGCGCCGCGAGCTGCAGTTCCGGGCTaGGCTCTGGCGCGGGATTCAAGGTGTGTTCGGCGA +
Preference number: 6 (lower is better)
Translates to: SPGPAPRAAVPG*ALARDSRCVRR
Trigger: TCGCCGAACACACCTTGAATCCCGCGCCAGAGCGCAGCCCGGAACTGCAGCTCGCGGCGCGGGCCCAGGACT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554858.1
ENST00000555920.5
CDS CCA 72 bp GGCCCGCGCCGCGAGCTGCAGTTCCGGGCTGCGCTCTaGCGCGGGATTCAAGGTGTGTTCGGCGAGTCCTTG +
Preference number: 6 (lower is better)
Translates to: GPRRELQFRAAL*RGIQGVFGESL
Trigger: CAAGGACTCGCCGAACACACCTTGAATCCCGCGCCAGAGCGCAGCCCGGAACTGCAGCTCGCGGCGCGGGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554317.5
ENST00000554858.1
ENST00000555920.5
CDS CCA 72 bp CCACGCGGGTGTGGTCCTCCTTCACCCGCTGCAGCATaGGCGGCAGCCACTCGGTGTTCACTTCGCAGTGGC +
Preference number: 6 (lower is better)
Translates to: PRGCGPPSPAAA*AAATRCSLRSG
Trigger: GCCACTGCGAAGTGAACACCGAGTGGCTGCCGCCCATGCTGCAGCGGGTGAAGGAGGACCACACCCGCGTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337827.8
ENST00000448469.8
ENST00000553471.6
ENST00000553669.1
CDS GCA 72 bp GCTGCCACTGCTGGGCCTGGGCGTCAGCCTGACACTTaGTGGTCACCAGCTGGGCAGGCTTTGTCTCCAGGC +
Preference number: 6 (lower is better)
Translates to: AATAGPGRQPDT*WSPAGQALSPG
Trigger: GCCTGGAGACAAAGCCTGCCCAGCTGGTGACCAGCAAGTGTCAGGCTGACGCCCAGGCCCAGCAGTGGCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337827.8
ENST00000448469.8
ENST00000556829.1
CDS CCA 72 bp CCAGGATCCAGGCTACGGTCAGGATGGCGATGGCATTaGCGCGGATCTTCCTCATGGTGGGCAGACGGGCGC +
Preference number: 6 (lower is better)
Translates to: PGSRLRSGWRWH*RGSSSWWADGR
Trigger: GCGCCCGTCTGCCCACCATGAGGAAGATCCGCGCCAATGCCATCGCCATCCTGACCGTAGCCTGGATCCTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337827.8
ENST00000448469.8
ENST00000553471.6
ENST00000554317.5
ENST00000555920.5
CDS CAA 72 bp CCCAGGATCCAGGCTACGGTCAGGATGGCGATGGCATaGGCGCGGATCTTCCTCATGGTGGGCAGACGGGCG +
Preference number: 6 (lower is better)
Translates to: PRIQATVRMAMA*ARIFLMVGRRA
Trigger: CGCCCGTCTGCCCACCATGAGGAAGATCCGCGCCAATGCCATCGCCATCCTGACCGTAGCCTGGATCCTGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337827.8
ENST00000448469.8
ENST00000553471.6
ENST00000554317.5
ENST00000555920.5
CDS CAA 72 bp TGGCGGGTGTCCCGGATGGGCCGGTCTGGGCTCAGCTaGTCACTCTCCAGCTGGTTGAAGGCGTGCTGTCTG +
Preference number: 6 (lower is better)
Translates to: WRVSRMGRSGLS*SLSSWLKACCL
Trigger: CAGACAGCACGCCTTCAACCAGCTGGAGAGTGACAAGCTGAGCCCAGACCGGCCCATCCGGGACACCCGCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337827.8
ENST00000448469.8
ENST00000553471.6
ENST00000553669.1
ENST00000553740.1
ENST00000555920.5
CDS CAA 72 bp CGCACTCGGGACCGGATCAGCCCTTCCCGCCGATCATaGCGCAGGCACTTGACCTTGGGGATCCTGGTCAGG +
Preference number: 6 (lower is better)
Translates to: RTRDRISPSRRS*RRHLTLGILVR
Trigger: CCTGACCAGGATCCCCAAGGTCAAGTGCCTGCGCAATGATCGGCGGGAAGGGCTGATCCGGTCCCGAGTGCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337827.8
ENST00000448469.8
ENST00000553471.6
ENST00000553669.1
CDS CCA 72 bp GCAGCTGTAATGGCGGGTGTCCCGGATGGGCCGGTCTaGGCTCAGCTTGTCACTCTCCAGCTGGTTGAAGGC +
Preference number: 6 (lower is better)
Translates to: AAVMAGVPDGPV*AQLVTLQLVEG
Trigger: GCCTTCAACCAGCTGGAGAGTGACAAGCTGAGCCCAGACCGGCCCATCCGGGACACCCGCCATTACAGCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337827.8
ENST00000448469.8
ENST00000553471.6
ENST00000553669.1
ENST00000553740.1
ENST00000555920.5
CDS CCA 72 bp AAGGTGGAGGTGGCAGCCAGGCACTTCCCCTGCTGCTaGATGAGGTGGTCACTGAACAGCCATGCCTGGGCG +
Preference number: 6 (lower is better)
Translates to: KVEVAARHFPCC*MRWSLNSHAWA
Trigger: CGCCCAGGCATGGCTGTTCAGTGACCACCTCATCCAGCAGCAGGGGAAGTGCCTGGCTGCCACCTCCACCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337827.8
ENST00000448469.8
ENST00000553471.6
ENST00000553669.1
CDS CAA 90 bp AGCCAGACCGGGCCCGCCCAGAGGAGGGATTGGAAGCTGGTGCACTaGACATTCGAAGAGCGCGAAGGGGAAACGACGCTGCCTCACACC +
Preference number: 6 (lower is better)
Translates to: SQTGPAQRRDWKLVH*TFEEREGETTLPHT
Trigger: GGTGTGAGGCAGCGTCGTTTCCCCTTCGCGCTCTTCGAATGTCAAGTGCACCAGCTTCCAATCCCTCCTCTGGGCGGGCCCGGTCTGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554858.1
CDS TCA 72 bp GCCGGTCTGGGCTCAGCTTGTCACTCTCCAGCTGGTTaGAGGCGTGCTGTCTGTAGGGGTCCTCTCCAGCCT +
Preference number: 6 (lower is better)
Translates to: AGLGSACHSPAG*RRAVCRGPLQP
Trigger: AGGCTGGAGAGGACCCCTACAGACAGCACGCCTTCAACCAGCTGGAGAGTGACAAGCTGAGCCCAGACCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000337827.8
ENST00000448469.8
ENST00000553471.6
ENST00000553669.1
ENST00000553740.1
ENST00000554317.5
ENST00000555920.5
CDS TCA 72 bp GGCCCGCCCAGAGGAGGGATTGGAAGCTGGTGCACTTaGCATTCGAAGAGCGCGAAGGGGAAACGACGCTGC +
Preference number: 6 (lower is better)
Translates to: GPPRGGIGSWCT*HSKSAKGKRRC
Trigger: GCAGCGTCGTTTCCCCTTCGCGCTCTTCGAATGTCAAGTGCACCAGCTTCCAATCCCTCCTCTGGGCGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554858.1
CDS GCA 72 bp TTCGCAGTGGCTATCCAGAAAGGTGAGAACGGTAGCTaGAGCCACGTCCGCCCCACGCACTCGGGACCGGAT +
Preference number: 6 (lower is better)
Translates to: FAVAIQKGENGS*SHVRPTHSGPD
Trigger: ATCCGGTCCCGAGTGCGTGGGGCGGACGTGGCTGCAGCTACCGTTCTCACCTTTCTGGATAGCCACTGCGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337827.8
ENST00000448469.8
ENST00000553471.6
ENST00000553669.1
CDS GCA 72 bp ATGCCTGGGCGGGCTGCGGGTTCTTGGCAGACCCTCTaGAGATCCCCATTCCAAGCAGGAAGTCACCAGCTG +
Preference number: 6 (lower is better)
Translates to: MPGRAAGSWQTL*RSPFQAGSHQL
Trigger: CAGCTGGTGACTTCCTGCTTGGAATGGGGATCTGCAGAGGGTCTGCCAAGAACCCGCAGCCCGCCCAGGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337827.8
ENST00000448469.8
ENST00000553471.6
ENST00000553669.1
CDS GCA 72 bp TTATTTGAGTCAATCAGGGGCTCTCCTGCCAAGGTCTaGCACCCTGAGGCATGGCCCCTCGGGCTGCTGGGC +
Preference number: 6 (lower is better)
Translates to: LFESIRGSPAKV*HPEAWPLGLLG
Trigger: GCCCAGCAGCCCGAGGGGCCATGCCTCAGGGTGGCAGACCTTGGCAGGAGAGCCCCTGATTGACTCAAATAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553471.6
CDS CCA 72 bp ACACAGATGGGCAGCTGTAATGGCGGGTGTCCCGGATaGGCCGGTCTGGGCTCAGCTTGTCACTCTCCAGCT +
Preference number: 6 (lower is better)
Translates to: TQMGSCNGGCPG*AGLGSACHSPA
Trigger: AGCTGGAGAGTGACAAGCTGAGCCCAGACCGGCCCATCCGGGACACCCGCCATTACAGCTGCCCATCTGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337827.8
ENST00000448469.8
ENST00000553471.6
ENST00000553669.1
ENST00000553740.1
ENST00000555920.5
CDS CAA 72 bp GGGCCCGCCCAGAGGAGGGATTGGAAGCTGGTGCACTaGACATTCGAAGAGCGCGAAGGGGAAACGACGCTG +
Preference number: 6 (lower is better)
Translates to: GPAQRRDWKLVH*TFEEREGETTL
Trigger: CAGCGTCGTTTCCCCTTCGCGCTCTTCGAATGTCAAGTGCACCAGCTTCCAATCCCTCCTCTGGGCGGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554858.1
CDS GCA 72 bp GGAAACGACGCTGCCTCACACCCAGTGCTAGGAGAGTaGGGGTACGGCCCTTCCACATTTTTCGCTGGCCTG +
Preference number: 6 (lower is better)
Translates to: GNDAASHPVLGE*GYGPSTFFAGL
Trigger: CAGGCCAGCGAAAAATGTGGAAGGGCCGTACCCGCACTCTCCTAGCACTGGGTGTGAGGCAGCGTCGTTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554858.1
CDS CAA 90 bp ACTCGGGACCGGATCAGCCCTTCCCGCCGATCATTGCGCAGGCACTaGACCTTGGGGATCCTGGTCAGGAGTAGACAGTCTTCCGGATCT +
Preference number: 6 (lower is better)
Translates to: TRDRISPSRRSLRRH*TLGILVRSRQSSGS
Trigger: AGATCCGGAAGACTGTCTACTCCTGACCAGGATCCCCAAGGTCAAGTGCCTGCGCAATGATCGGCGGGAAGGGCTGATCCGGTCCCGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337827.8
ENST00000448469.8
ENST00000553471.6
ENST00000553669.1
CDS CAA 90 bp TCGGGCTGCTGGGCCTCTGGGCCAGAGGCAAGGAGACTCACCTGCTaGCCTTCTCTAGGGTTGCACATCTGCAGTATGACTGGGGATCCA +
Preference number: 6 (lower is better)
Translates to: SGCWASGPEARRLTC*PSLGLHICSMTGDP
Trigger: TGGATCCCCAGTCATACTGCAGATGTGCAACCCTAGAGAAGGCAAGCAGGTGAGTCTCCTTGCCTCTGGCCCAGAGGCCCAGCAGCCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553471.6
ENST00000553669.1
CDS GCA 72 bp ATTAAGGTGGAGGTGGCAGCCAGGCACTTCCCCTGCTaGTGGATGAGGTGGTCACTGAACAGCCATGCCTGG +
Preference number: 6 (lower is better)
Translates to: IKVEVAARHFPC*WMRWSLNSHAW
Trigger: CCAGGCATGGCTGTTCAGTGACCACCTCATCCAGCAGCAGGGGAAGTGCCTGGCTGCCACCTCCACCTTAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337827.8
ENST00000448469.8
ENST00000553471.6
ENST00000553669.1
CDS CCA 72 bp AGCATGGGCGGCAGCCACTCGGTGTTCACTTCGCAGTaGCTATCCAGAAAGGTGAGAACGGTAGCTGCAGCC +
Preference number: 6 (lower is better)
Translates to: SMGGSHSVFTSQ*LSRKVRTVAAA
Trigger: GGCTGCAGCTACCGTTCTCACCTTTCTGGATAGCCACTGCGAAGTGAACACCGAGTGGCTGCCGCCCATGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337827.8
ENST00000448469.8
ENST00000553471.6
ENST00000553669.1
CDS CCA 72 bp AGGAGAGTGCGGGTACGGCCCTTCCACATTTTTCGCTaGCCTGGGGCTCCCAGATTTCACGATGCTTCCCTC +
Preference number: 6 (lower is better)
Translates to: RRVRVRPFHIFR*PGAPRFHDASL
Trigger: GAGGGAAGCATCGTGAAATCTGGGAGCCCCAGGCCAGCGAAAAATGTGGAAGGGCCGTACCCGCACTCTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554858.1
CDS CCA 72 bp GAGATTAGCCAGACCGGGCCCGCCCAGAGGAGGGATTaGAAGCTGGTGCACTTGACATTCGAAGAGCGCGAA +
Preference number: 6 (lower is better)
Translates to: EISQTGPAQRRD*KLVHLTFEERE
Trigger: TTCGCGCTCTTCGAATGTCAAGTGCACCAGCTTCCAATCCCTCCTCTGGGCGGGCCCGGTCTGGCTAATCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554858.1
CDS CAA 72 bp AGCCCTTCCCGCCGATCATTGCGCAGGCACTTGACCTaGGGGATCCTGGTCAGGAGTAGACAGTCTTCCGGA +
Preference number: 6 (lower is better)
Translates to: SPSRRSLRRHLT*GILVRSRQSSG
Trigger: TCCGGAAGACTGTCTACTCCTGACCAGGATCCCCAAGGTCAAGTGCCTGCGCAATGATCGGCGGGAAGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337827.8
ENST00000448469.8
ENST00000553471.6
ENST00000553669.1
CDS CAA 72 bp CGGATCAGCCCTTCCCGCCGATCATTGCGCAGGCACTaGACCTTGGGGATCCTGGTCAGGAGTAGACAGTCT +
Preference number: 6 (lower is better)
Translates to: RISPSRRSLRRH*TLGILVRSRQS
Trigger: AGACTGTCTACTCCTGACCAGGATCCCCAAGGTCAAGTGCCTGCGCAATGATCGGCGGGAAGGGCTGATCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337827.8
ENST00000448469.8
ENST00000553471.6
ENST00000553669.1
CDS CAA 90 bp CAGCCTTCCGCTCCAGCTAACAGCCATGAAGCTCCTGCTGACTACTaGGCTTGGGCAACTGCAGGGGAAGTTGCCCCCAAAGTGTCTGTG +
Preference number: 6 (lower is better)
Translates to: QPSAPANSHEAPADY*AWATAGEVAPKVSV
Trigger: CACAGACACTTTGGGGGCAACTTCCCCTGCAGTTGCCCAAGCCAAGTAGTCAGCAGGAGCTTCATGGCTGTTAGCTGGAGCGGAAGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553740.1
CDS TCA 72 bp GGATCAGCCCTTCCCGCCGATCATTGCGCAGGCACTTaGCCTTGGGGATCCTGGTCAGGAGTAGACAGTCTT +
Preference number: 6 (lower is better)
Translates to: GSALPADHCAGT*PWGSWSGVDSL
Trigger: AAGACTGTCTACTCCTGACCAGGATCCCCAAGGTCAAGTGCCTGCGCAATGATCGGCGGGAAGGGCTGATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337827.8
ENST00000448469.8
ENST00000553471.6
ENST00000553669.1
CDS GCA 72 bp CGTGGGCTCGGTTGTCCTGCCATAAGTAGTAGAAAGTaGCCAGGATCCAGGCTACGGTCAGGATGGCGATGG +
Preference number: 6 (lower is better)
Translates to: RGLGCPAISSRK*PGSRLRSGWRW
Trigger: CCATCGCCATCCTGACCGTAGCCTGGATCCTGGGCACTTTCTACTACTTATGGCAGGACAACCGAGCCCACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337827.8
ENST00000448469.8
ENST00000553471.6
ENST00000553669.1
ENST00000554317.5
ENST00000555920.5
CDS CCA 72 bp AGTAGAAAGTGCCCAGGATCCAGGCTACGGTCAGGATaGCGATGGCATTGGCGCGGATCTTCCTCATGGTGG +
Preference number: 6 (lower is better)
Translates to: SRKCPGSRLRSG*RWHWRGSSSWW
Trigger: CCACCATGAGGAAGATCCGCGCCAATGCCATCGCCATCCTGACCGTAGCCTGGATCCTGGGCACTTTCTACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337827.8
ENST00000448469.8
ENST00000553471.6
ENST00000554317.5
ENST00000555920.5
CDS CCA 72 bp AGTGCGGGTACGGCCCTTCCACATTTTTCGCTGGCCTaGGGCTCCCAGATTTCACGATGCTTCCCTCTATCC +
Preference number: 6 (lower is better)
Translates to: SAGTALPHFSLA*GSQISRCFPLS
Trigger: GGATAGAGGGAAGCATCGTGAAATCTGGGAGCCCCAGGCCAGCGAAAAATGTGGAAGGGCCGTACCCGCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554858.1
CDS CCA 72 bp GGAGGAAGATTAGGGGGTGGCAGCTTGGGCAGACAGTaGCTTCAATCCAGAGCAGAGGTTCAGGCCCGTCAT +
Preference number: 6 (lower is better)
Translates to: GGRLGGGSLGRQ*LQSRAEVQARH
Trigger: ATGACGGGCCTGAACCTCTGCTCTGGATTGAAGCCACTGTCTGCCCAAGCTGCCACCCCCTAATCTTCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556829.1
CDS TCA 72 bp GGAGCCACAGCCAGCCTCCCAGCACAGTGCAATAGCTaGCCCTTCAAGAAAATCCCTCCGTCATGTGTGTGG +
Preference number: 6 (lower is better)
Translates to: GATASLPAQCNS*PFKKIPPSCVW
Trigger: CCACACACATGACGGAGGGATTTTCTTGAAGGGTCAGCTATTGCACTGTGCTGGGAGGCTGGCTGTGGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337827.8
CDS GCA 72 bp CTTATGGGCCTGGTGGGGTCTGTCCGGGTCATCTTCTaGTCAAGAGGGATCTGCTCCCACTTGAAATGCAGG +
Preference number: 6 (lower is better)
Translates to: LMGLVGSVRVIF*SRGICSHLKCR
Trigger: CCTGCATTTCAAGTGGGAGCAGATCCCTCTTGAGCAGAAGATGACCCGGACAGACCCCACCAGGCCCATAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337827.8
ENST00000448469.8
ENST00000553471.6
ENST00000553669.1
ENST00000556677.1
CDS CCA 72 bp CTCCAGCTAACAGCCATGAAGCTCCTGCTGACTACTTaGCTTGGGCAACTGCAGGGGAAGTTGCCCCCAAAG +
Preference number: 6 (lower is better)
Translates to: LQLTAMKLLLTT*LGQLQGKLPPK
Trigger: CTTTGGGGGCAACTTCCCCTGCAGTTGCCCAAGCCAAGTAGTCAGCAGGAGCTTCATGGCTGTTAGCTGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553740.1
CDS CAA 72 bp GAGGCAAGGAGACTCACCTGCTTGCCTTCTCTAGGGTaGCACATCTGCAGTATGACTGGGGATCCAGGGGAG +
Preference number: 6 (lower is better)
Translates to: EARRLTCLPSLG*HICSMTGDPGE
Trigger: CTCCCCTGGATCCCCAGTCATACTGCAGATGTGCAACCCTAGAGAAGGCAAGCAGGTGAGTCTCCTTGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553471.6
ENST00000553669.1
CDS CAA 90 bp TCTGGGCCAGAGGCAAGGAGACTCACCTGCTTGCCTTCTCTAGGGTaGCACATCTGCAGTATGACTGGGGATCCAGGGGAGGACATTAAG +
Preference number: 6 (lower is better)
Translates to: SGPEARRLTCLPSLG*HICSMTGDPGEDIK
Trigger: CTTAATGTCCTCCCCTGGATCCCCAGTCATACTGCAGATGTGCAACCCTAGAGAAGGCAAGCAGGTGAGTCTCCTTGCCTCTGGCCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553471.6
ENST00000553669.1
CDS GCA 72 bp CAGGCTCCAGTCGAACCCTCCACGAAGGTCAGCAGATaGTGCAAGGTAGGCAAAATTATCCAGACTGATGAC +
Preference number: 6 (lower is better)
Translates to: QAPVEPSTKVSR*CKVGKIIQTDD
Trigger: GTCATCAGTCTGGATAATTTTGCCTACCTTGCAGCATCTGCTGACCTTCGTGGAGGGTTCGACTGGAGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337827.8
ENST00000448469.8
ENST00000553471.6
ENST00000553669.1
CDS GCA 72 bp AGACTCACCTGCTTGCCTTCTCTAGGGTTGCACATCTaGAGTATGACTGGGGATCCAGGGGAGGACATTAAG +
Preference number: 6 (lower is better)
Translates to: RLTCLPSLGLHI*SMTGDPGEDIK
Trigger: CTTAATGTCCTCCCCTGGATCCCCAGTCATACTGCAGATGTGCAACCCTAGAGAAGGCAAGCAGGTGAGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553471.6
ENST00000553669.1
CDS GCA 72 bp CTCCATTTCTGCTTGCCTTCTCTAGGGTTGCACATCTaGAGTATGACTGGGGATCCAGGGGAGGACATTAAG +
Preference number: 6 (lower is better)
Translates to: LHFCLPSLGLHI*SMTGDPGEDIK
Trigger: CTTAATGTCCTCCCCTGGATCCCCAGTCATACTGCAGATGTGCAACCCTAGAGAAGGCAAGCAGAAATGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337827.8
ENST00000448469.8
CDS CCA 72 bp AATGCAGGCTCCAGTCGAACCAATCTAACTAATGGCTaGGTCCATATACTGGGAGTCCAGATCCCAAACAGG +
Preference number: 6 (lower is better)
Translates to: NAGSSRTNLTNG*VHILGVQIPNR
Trigger: CCTGTTTGGGATCTGGACTCCCAGTATATGGACCCAGCCATTAGTTAGATTGGTTCGACTGGAGCCTGCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556677.1
CDS CCA 72 bp TCACGATGCTTCCCTCTATCCCGCCTCATTGACCCCTaGACAACCCTGAAATATCATCGTCAGCATTATTTC +
Preference number: 6 (lower is better)
Translates to: SRCFPLSRLIDP*TTLKYHRQHYF
Trigger: GAAATAATGCTGACGATGATATTTCAGGGTTGTCCAGGGGTCAATGAGGCGGGATAGAGGGAAGCATCGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554858.1
CDS TCA 72 bp TCCCTCTATCCCGCCTCATTGACCCCTGGACAACCCTaGAATATCATCGTCAGCATTATTTCATCGGAAAGA +
Preference number: 6 (lower is better)
Translates to: SLYPASLTPGQP*NIIVSIISSER
Trigger: TCTTTCCGATGAAATAATGCTGACGATGATATTTCAGGGTTGTCCAGGGGTCAATGAGGCGGGATAGAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554858.1