RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GALNT14 (Homo sapiens)

Ensembl gene IDs: ENSG00000158089

Ensembl transcript IDs: ENST00000324589.9, ENST00000349752.10, ENST00000406653.5, ENST00000424136.5, ENST00000430167.1, ENST00000455477.5, ENST00000461193.5, ENST00000464038.5, ENST00000475320.5, ENST00000481023.5, ENST00000485468.1, ENST00000486564.5, ENST00000490212.5, ENST00000496397.5, ENST00000498206.5

Found 505 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCTCCACCTCCCAGTCCAGGATGTCTGAGGTGGTTGCAGGCTGCTTaGTGCCCAGTTTCCAGTCTGTTCTGGTCCAGGGAAGCACCACCC +
Preference number: 1 (lower is better)
Translates to: PPPPSPGCLRWLQAA*CPVSSLFWSREAPP
Trigger: GGGTGGTGCTTCCCTGGACCAGAACAGACTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGACATCCTGGACTGGGAGGTGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
3UTR TCA 90 bp CCGGGATGGCCCGATTGCTGGAGATCCGCTCACTCTCCCGCTGGTTaGAAGCATACAGCTTATAGGGGTCGTCACCAACGCGCCACTTTT +
Preference number: 1 (lower is better)
Translates to: PGWPDCWRSAHSPAG*KHTAYRGRHQRATF
Trigger: AAAAGTGGCGCGTTGGTGACGACCCCTATAAGCTGTATGCTTTCAACCAGCGGGAGAGTGAGCGGATCTCCAGCAATCGGGCCATCCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424136.5
ENST00000455477.5
3UTR-3UTR CCA 90 bp GCCCTGGGCGATGTCAGCGCCCCGAATCCGGGACCGGACCAGACCTTGCCGTTCGGATGGCCCGATTGCTaGAGATCCGCTCACTCTCCC +
Preference number: 2 (lower is better)
Translates to: ALGDVSAPNPGPDQTLPFGWPDC*RSAHSP
Trigger: GGGAGAGTGAGCGGATCTCCAGCAATCGGGCCATCC...GAACGGCAAGGTCTGGTCCGGTCCCGGATTCGGGGCGCTGACATCGCCCAGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424136.5
ENST00000455477.5
3UTR-3UTR CCA 90 bp CCTCACAGTGGCTGTCGAGGAAAGTCAGAGTGGTGCCCTGGGCGATGTCAGCGCGGCGAGTGTCCGGGATaGCCCGATTGCTGGAGATCC +
Preference number: 2 (lower is better)
Translates to: PHSGCRGKSEWCPGRCQRGECPG*PDCWRS
Trigger: GGATCTCCAGCAATCGGGCCATCCCGGACACTCGCC...GCGCTGACATCGCCCAGGGCACCACTCTGACTTTCCTCGACAGCCACTGTGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424136.5
ENST00000455477.5
3UTR CAA 90 bp GCCTCCACCTCCCAGTCCAGGATGTCTGAGGTGGTTGCAGGCTGCTaGCTGCCCAGTTTCCAGTCTGTTCTGGTCCAGGGAAGCACCACC +
Preference number: 2 (lower is better)
Translates to: ASTSQSRMSEVVAGC*LPSFQSVLVQGSTT
Trigger: GGTGGTGCTTCCCTGGACCAGAACAGACTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGACATCCTGGACTGGGAGGTGGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
3UTR-3UTR CCA 90 bp GCGATGTCAGCGCCCCGAATCCGGGACCGGACCAGACCTTGCCGTTCATTATTGCGCCGCTCATCAAACTaGTCCCACAGGTCGTCCCAG +
Preference number: 2 (lower is better)
Translates to: AMSAPRIRDRTRPCRSLLRRSSN*SHRSSQ
Trigger: CTGGGACGACCTGTGGGACCAGTTTGATGAGCGGCG...CAATAATGAACGGCAAGGTCTGGTCCGGTCCCGGATTCGGGGCGCTGACATCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424136.5
ENST00000455477.5
3UTR-3UTR CCA 90 bp GTGCGGTTTAATACACTGCGGATGGTCCTGAGCAGCGTGGAGCGGGCCTCGTTGAGTGTGCATCTCAGATaGCGAGTGTCCGGGATGGCC +
Preference number: 2 (lower is better)
Translates to: VRFNTLRMVLSSVERASLSVHLR*RVSGMA
Trigger: GGCCATCCCGGACACTCGCCATCTGAGATGCACACT...CAACGAGGCCCGCTCCACGCTGCTCAGGACCATCCGCAGTGTATTAAACCGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424136.5
ENST00000455477.5
3UTR CAA 90 bp ACCAGCAGTGTGCATCTCAGATGGCGAGTGTCCGGGATGGCCCGATaGCTGGAGATCCGCTCACTCTCCCGCTGGTTGAAAGCATACAGC +
Preference number: 2 (lower is better)
Translates to: TSSVHLRWRVSGMAR*LEIRSLSRWLKAYS
Trigger: GCTGTATGCTTTCAACCAGCGGGAGAGTGAGCGGATCTCCAGCAATCGGGCCATCCCGGACACTCGCCATCTGAGATGCACACTGCTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424136.5
ENST00000455477.5
3UTR-3UTR CCA 90 bp CTCACAGTGGCTGTCGAGGAAAGTCAGAGTGGTGCCCTGGGCGATGTCAGCGCCCGCTCACTCTCCCGCTaGTTGAAAGCATACAGCTTA +
Preference number: 2 (lower is better)
Translates to: LTVAVEESQSGALGDVSARSLSR*LKAYSL
Trigger: TAAGCTGTATGCTTTCAACCAGCGGGAGAGTGAGCG...GGCGCTGACATCGCCCAGGGCACCACTCTGACTTTCCTCGACAGCCACTGTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424136.5
ENST00000455477.5
3UTR-3UTR TCA 90 bp CTGGGCGATGTCAGCGCCCCGAATCCGGGACCGGACCAGACCTTGCCGTTCATTAGTCATCCACTAATATaGTTTCCCGGATCAGATGCG +
Preference number: 2 (lower is better)
Translates to: LGDVSAPNPGPDQTLPFISHPLI*FPGSDA
Trigger: CGCATCTGATCCGGGAAATCATATTAGTGGATGACT...AATGAACGGCAAGGTCTGGTCCGGTCCCGGATTCGGGGCGCTGACATCGCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424136.5
ENST00000455477.5
3UTR-3UTR TCA 90 bp CATTTCACCTTGGGCAACTTGATGAGCTGTTTACAGTCATCAGGGTCATTGCTGCACTGCGGATGGTCCTaGGCAGCGTGGAGCGGGCCT +
Preference number: 2 (lower is better)
Translates to: HFTLGNLMSCLQSSGSLLHCGWS*AAWSGP
Trigger: AGGCCCGCTCCACGCTGCTCAGGACCATCCGCAGTG...CAGCAATGACCCTGATGACTGTAAACAGCTCATCAAGTTGCCCAAGGTGAAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424136.5
ENST00000455477.5
3UTR-3UTR GCA 90 bp CAATCAGGGAATGACTGGCCAGGACTGGAACTTAACGGCCTTGAGAACATGTGGGAGGTGGTTGCAGGCTaGTTGCTGCCCAGTTTCCAG +
Preference number: 2 (lower is better)
Translates to: QSGNDWPGLELNGLENMWEVVAG*LLPSFQ
Trigger: CTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTC...CCACATGTTCTCAAGGCCGTTAAGTTCCAGTCCTGGCCAGTCATTCCCTGATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
3UTR-3UTR CCA 90 bp CCTGGCCTAGTGAAAAAGAAGGCTTTTCTTTCTGGCCTCCAGAGACTGCTTCCTGGAAGCACCACCCCATaGCCCTTGCTGCTTCTGGCA +
Preference number: 2 (lower is better)
Translates to: PGLVKKKAFLSGLQRLLPGSTTP*PLLLLA
Trigger: TGCCAGAAGCAGCAAGGGCCATGGGGTGGTGCTTCC...AGGAAGCAGTCTCTGGAGGCCAGAAAGAAAAGCCTTCTTTTTCACTAGGCCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
3UTR-3UTR CCA 90 bp GACTGGCCAGGACTGGAACTTAACGGCCTTGAGAACATGTGGGATTTGTCTTTGGGAAGCACCACCCCATaGCCCTTGCTGCTTCTGGCA +
Preference number: 2 (lower is better)
Translates to: DWPGLELNGLENMWDLSLGSTTP*PLLLLA
Trigger: TGCCAGAAGCAGCAAGGGCCATGGGGTGGTGCTTCC...CAAAGACAAATCCCACATGTTCTCAAGGCCGTTAAGTTCCAGTCCTGGCCAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
3UTR-3UTR TCA 90 bp CAATCAGGGAATGACTGGCCAGGACTGGAACTTAACGGCCTTGAGAACATGTGGTTCCTCTGTCCTCCCTaGGACAGTTGCTCCTGTCCT +
Preference number: 2 (lower is better)
Translates to: QSGNDWPGLELNGLENMWFLCPP*DSCSCP
Trigger: AGGACAGGAGCAACTGTCTCAGGGAGGACAGAGGAA...CCACATGTTCTCAAGGCCGTTAAGTTCCAGTCCTGGCCAGTCATTCCCTGATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
3UTR-3UTR TCA 90 bp TCTCCAGATACCAATCAGGGAATGACTGGCCAGGACTGGAACTTAACGGCCTTGTTCCTCTGTCCTCCCTaGGACAGTTGCTCCTGTCCT +
Preference number: 2 (lower is better)
Translates to: SPDTNQGMTGQDWNLTALFLCPP*DSCSCP
Trigger: AGGACAGGAGCAACTGTCTCAGGGAGGACAGAGGAA...CAAGGCCGTTAAGTTCCAGTCCTGGCCAGTCATTCCCTGATTGGTATCTGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
3UTR-3UTR GCA 90 bp CCTGGCCTAGTGAAAAAGAAGGCTTTTCTTTCTGGCCTCCAGAGACTGCTTCCTGAGGTGGTTGCAGGCTaGTTGCTGCCCAGTTTCCAG +
Preference number: 2 (lower is better)
Translates to: PGLVKKKAFLSGLQRLLPEVVAG*LLPSFQ
Trigger: CTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTC...AGGAAGCAGTCTCTGGAGGCCAGAAAGAAAAGCCTTCTTTTTCACTAGGCCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
3UTR-3UTR GCA 90 bp AGACCTTGCCGTTCATTATTGCGCAAGCATTTCACCTTGGGCAACTTGATGAGCCCGGGATGGCCCGATTaGTGGAGATCCGCTCACTCT +
Preference number: 2 (lower is better)
Translates to: RPCRSLLRKHFTLGNLMSPGWPD*WRSAHS
Trigger: AGAGTGAGCGGATCTCCAGCAATCGGGCCATCCCGG...GCTCATCAAGTTGCCCAAGGTGAAATGCTTGCGCAATAATGAACGGCAAGGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424136.5
ENST00000455477.5
3UTR-3UTR CCA 90 bp GACTGGCCAGGACTGGAACTTAACGGCCTTGAGAACATGTGGGATTTGTCTTTGCCAGGATGTCTGAGGTaGTTGCAGGCTGCTTGCTGC +
Preference number: 2 (lower is better)
Translates to: DWPGLELNGLENMWDLSLPGCLR*LQAACC
Trigger: GCAGCAAGCAGCCTGCAACCACCTCAGACATCCTGG...CAAAGACAAATCCCACATGTTCTCAAGGCCGTTAAGTTCCAGTCCTGGCCAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
3UTR-3UTR CCA 90 bp AGATACCAATCAGGGAATGACTGGCCAGGACTGGAACTTAACGGCCTTGAGAACCCAGGATGTCTGAGGTaGTTGCAGGCTGCTTGCTGC +
Preference number: 2 (lower is better)
Translates to: RYQSGNDWPGLELNGLENPGCLR*LQAACC
Trigger: GCAGCAAGCAGCCTGCAACCACCTCAGACATCCTGG...GTTCTCAAGGCCGTTAAGTTCCAGTCCTGGCCAGTCATTCCCTGATTGGTATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
3UTR-3UTR CCA 90 bp TCCTGGCCTAGTGAAAAAGAAGGCTTTTCTTTCTGGCCTCCAGAGACTGCTTCCCCAGGATGTCTGAGGTaGTTGCAGGCTGCTTGCTGC +
Preference number: 2 (lower is better)
Translates to: SWPSEKEGFSFWPPETASPGCLR*LQAACC
Trigger: GCAGCAAGCAGCCTGCAACCACCTCAGACATCCTGG...GGAAGCAGTCTCTGGAGGCCAGAAAGAAAAGCCTTCTTTTTCACTAGGCCAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
3UTR CAA 90 bp CCACAGGTCGTCCCAGTCAGCGTCCGAAGGCTAACAGACTCCATCTaGCTTCTAACTTCCAAGCTGTCTTTGTTCAATCCTGGGTGTAGG +
Preference number: 2 (lower is better)
Translates to: PQVVPVSVRRLTDSI*LLTSKLSLFNPGCR
Trigger: CCTACACCCAGGATTGAACAAAGACAGCTTGGAAGTTAGAAGCAAGATGGAGTCTGTTAGCCTTCGGACGCTGACTGGGACGACCTGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424136.5
3UTR-3UTR TCA 90 bp GACTGGCCAGGACTGGAACTTAACGGCCTTGAGAACATGTGGGATTTGTCTTTGTTCCTCTGTCCTCCCTaGGACAGTTGCTCCTGTCCT +
Preference number: 2 (lower is better)
Translates to: DWPGLELNGLENMWDLSLFLCPP*DSCSCP
Trigger: AGGACAGGAGCAACTGTCTCAGGGAGGACAGAGGAA...CAAAGACAAATCCCACATGTTCTCAAGGCCGTTAAGTTCCAGTCCTGGCCAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
3UTR-3UTR GCA 90 bp CCTGGCCTAGTGAAAAAGAAGGCTTTTCTTTCTGGCCTCCAGAGACTGCTTCCTTGGTTGCAGGCTGCTTaGTGCCCAGTTTCCAGTCTG +
Preference number: 2 (lower is better)
Translates to: PGLVKKKAFLSGLQRLLPWLQAA*CPVSSL
Trigger: CAGACTGGAAACTGGGCAGCAAGCAGCCTGCAACCA...AGGAAGCAGTCTCTGGAGGCCAGAAAGAAAAGCCTTCTTTTTCACTAGGCCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
3UTR-3UTR CCA 90 bp CGTTCATTATTGCGCAAGCATTTCACCTTGGGCAACTTGATGAGCTGTTTACAGCGCCGCTCATCAAACTaGTCCCACAGGTCGTCCCAG +
Preference number: 2 (lower is better)
Translates to: RSLLRKHFTLGNLMSCLQRRSSN*SHRSSQ
Trigger: CTGGGACGACCTGTGGGACCAGTTTGATGAGCGGCG...CTGTAAACAGCTCATCAAGTTGCCCAAGGTGAAATGCTTGCGCAATAATGAACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424136.5
ENST00000455477.5
3UTR CAA 90 bp GACCGGACCAGACCTTGCCGTTCATTATTGCGCAAGCATTTCACCTaGGGCAACTTGATGAGCTGTTTACAGTCATCAGGGTCATTGCTG +
Preference number: 2 (lower is better)
Translates to: DRTRPCRSLLRKHFT*GNLMSCLQSSGSLL
Trigger: CAGCAATGACCCTGATGACTGTAAACAGCTCATCAAGTTGCCCAAGGTGAAATGCTTGCGCAATAATGAACGGCAAGGTCTGGTCCGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424136.5
ENST00000455477.5
3UTR-3UTR TCA 90 bp CCTGGCCTAGTGAAAAAGAAGGCTTTTCTTTCTGGCCTCCAGAGACTGCTTCCTTGTGGGATTTGTCTTTaGGCCCCATTGGCTTGTGAT +
Preference number: 2 (lower is better)
Translates to: PGLVKKKAFLSGLQRLLPCGICL*APLACD
Trigger: ATCACAAGCCAATGGGGCTCAAAGACAAATCCCACA...AGGAAGCAGTCTCTGGAGGCCAGAAAGAAAAGCCTTCTTTTTCACTAGGCCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
3UTR-3UTR TCA 90 bp TCCTGGCCTAGTGAAAAAGAAGGCTTTTCTTTCTGGCCTCCAGAGACTGCTTCCTGTGGGATTTGTCTTTaGGCCCCATTGGCTTGTGAT +
Preference number: 2 (lower is better)
Translates to: SWPSEKEGFSFWPPETASCGICL*APLACD
Trigger: ATCACAAGCCAATGGGGCTCAAAGACAAATCCCACA...GGAAGCAGTCTCTGGAGGCCAGAAAGAAAAGCCTTCTTTTTCACTAGGCCAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
3UTR-3UTR CCA 90 bp TCCTGGCCTAGTGAAAAAGAAGGCTTTTCTTTCTGGCCTCCAGAGACTGCTTCCGTCTTTGAGCCCCATTaGCTTGTGATGTTTTCCTCT +
Preference number: 2 (lower is better)
Translates to: SWPSEKEGFSFWPPETASVFEPH*LVMFSS
Trigger: AGAGGAAAACATCACAAGCCAATGGGGCTCAAAGAC...GGAAGCAGTCTCTGGAGGCCAGAAAGAAAAGCCTTCTTTTTCACTAGGCCAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
3UTR-3UTR CCA 90 bp CGTTCATTATTGCGCAAGCATTTCACCTTGGGCAACTTGATGAGCTGTTTACAGCAACGCGCCACTTTTTaGCATTCAGATACCGCCGCT +
Preference number: 2 (lower is better)
Translates to: RSLLRKHFTLGNLMSCLQQRATF*HSDTAA
Trigger: AGCGGCGGTATCTGAATGCCAAAAAGTGGCGCGTTG...CTGTAAACAGCTCATCAAGTTGCCCAAGGTGAAATGCTTGCGCAATAATGAACG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424136.5
ENST00000455477.5
3UTR-3UTR CAA 90 bp AGAGTGGTGCCCTGGGCGATGTCAGCGCCCCGAATCCGGGACCGGACCAGACCTTCCGGGATGGCCCGATaGCTGGAGATCCGCTCACTC +
Preference number: 3 (lower is better)
Translates to: RVVPWAMSAPRIRDRTRPSGMAR*LEIRSL
Trigger: GAGTGAGCGGATCTCCAGCAATCGGGCCATCCCGGA...AGGTCTGGTCCGGTCCCGGATTCGGGGCGCTGACATCGCCCAGGGCACCACTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424136.5
ENST00000455477.5
3UTR CCA 72 bp TCACAGTGGCTGTCGAGGAAAGTCAGAGTGGTGCCCTaGGCGATGTCAGCGCCCCGAATCCGGGACCGGACC +
Preference number: 3 (lower is better)
Translates to: SQWLSRKVRVVP*AMSAPRIRDRT
Trigger: GGTCCGGTCCCGGATTCGGGGCGCTGACATCGCCCAGGGCACCACTCTGACTTTCCTCGACAGCCACTGTGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424136.5
ENST00000455477.5
3UTR GCA 72 bp TCACCTCACAGTGGCTGTCGAGGAAAGTCAGAGTGGTaGCCTGGGCGATGTCAGCGCCCCGAATCCGGGACC +
Preference number: 3 (lower is better)
Translates to: SPHSGCRGKSEW*PGRCQRPESGT
Trigger: GGTCCCGGATTCGGGGCGCTGACATCGCCCAGGGCACCACTCTGACTTTCCTCGACAGCCACTGTGAGGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424136.5
ENST00000455477.5
3UTR-3UTR CAA 90 bp GGAAAGTCAGAGTGGTGCCCTGGGCGATGTCAGCGCCCCGAATCCGGGACCGGACCAACGCGCCACTTTTaGGCATTCAGATACCGCCGC +
Preference number: 3 (lower is better)
Translates to: GKSEWCPGRCQRPESGTGPTRHF*AFRYRR
Trigger: GCGGCGGTATCTGAATGCCAAAAAGTGGCGCGTTGG...TCCGGTCCCGGATTCGGGGCGCTGACATCGCCCAGGGCACCACTCTGACTTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424136.5
ENST00000455477.5
3UTR CCA 72 bp CCAGCAGTGTGCATCTCAGATGGCGAGTGTCCGGGATaGCCCGATTGCTGGAGATCCGCTCACTCTCCCGCT +
Preference number: 3 (lower is better)
Translates to: PAVCISDGECPG*PDCWRSAHSPA
Trigger: AGCGGGAGAGTGAGCGGATCTCCAGCAATCGGGCCATCCCGGACACTCGCCATCTGAGATGCACACTGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424136.5
ENST00000455477.5
3UTR-3UTR CAA 90 bp AGTCCAGGATGTCTGAGGTGGTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGACCACCCCATGGCCCTaGCTGCTTCTGGCAGGGGTC +
Preference number: 3 (lower is better)
Translates to: SPGCLRWLQAACCPVSSLTTPWP*LLLAGV
Trigger: GACCCCTGCCAGAAGCAGCAAGGGCCATGGGGTGGT...CAGACTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGACATCCTGGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
3UTR-3UTR CAA 90 bp GGAAAGTCAGAGTGGTGCCCTGGGCGATGTCAGCGCCCCGAATCCGGGACCGGACCTTGCCGTTCATTATaGCGCAAGCATTTCACCTTG +
Preference number: 3 (lower is better)
Translates to: GKSEWCPGRCQRPESGTGPCRSL*RKHFTL
Trigger: CAAGGTGAAATGCTTGCGCAATAATGAACGGCAAGG...TCCGGTCCCGGATTCGGGGCGCTGACATCGCCCAGGGCACCACTCTGACTTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424136.5
ENST00000455477.5
3UTR-3UTR CAA 90 bp CTCACAGTGGCTGTCGAGGAAAGTCAGAGTGGTGCCCTGGGCGATGTCAGCGCCCGCAAGCATTTCACCTaGGGCAACTTGATGAGCTGT +
Preference number: 3 (lower is better)
Translates to: LTVAVEESQSGALGDVSARKHFT*GNLMSC
Trigger: ACAGCTCATCAAGTTGCCCAAGGTGAAATGCTTGCG...GGCGCTGACATCGCCCAGGGCACCACTCTGACTTTCCTCGACAGCCACTGTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424136.5
ENST00000455477.5
3UTR GCA 72 bp CCCAGTCCAGGATGTCTGAGGTGGTTGCAGGCTGCTTaGTGCCCAGTTTCCAGTCTGTTCTGGTCCAGGGAA +
Preference number: 3 (lower is better)
Translates to: PSPGCLRWLQAA*CPVSSLFWSRE
Trigger: TTCCCTGGACCAGAACAGACTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGACATCCTGGACTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
3UTR GCA 72 bp ACCTCCCAGTCCAGGATGTCTGAGGTGGTTGCAGGCTaGTTGCTGCCCAGTTTCCAGTCTGTTCTGGTCCAG +
Preference number: 3 (lower is better)
Translates to: TSQSRMSEVVAG*LLPSFQSVLVQ
Trigger: CTGGACCAGAACAGACTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGACATCCTGGACTGGGAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
3UTR-3UTR CAA 90 bp CCTGGCCTAGTGAAAAAGAAGGCTTTTCTTTCTGGCCTCCAGAGACTGCTTCCTACCACCCCATGGCCCTaGCTGCTTCTGGCAGGGGTC +
Preference number: 3 (lower is better)
Translates to: PGLVKKKAFLSGLQRLLPTTPWP*LLLAGV
Trigger: GACCCCTGCCAGAAGCAGCAAGGGCCATGGGGTGGT...AGGAAGCAGTCTCTGGAGGCCAGAAAGAAAAGCCTTCTTTTTCACTAGGCCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
3UTR TCA 72 bp CCCGATTGCTGGAGATCCGCTCACTCTCCCGCTGGTTaGAAGCATACAGCTTATAGGGGTCGTCACCAACGC +
Preference number: 3 (lower is better)
Translates to: PDCWRSAHSPAG*KHTAYRGRHQR
Trigger: GCGTTGGTGACGACCCCTATAAGCTGTATGCTTTCAACCAGCGGGAGAGTGAGCGGATCTCCAGCAATCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424136.5
ENST00000455477.5
3UTR CCA 72 bp CACTTTTTGGCATTCAGATACCGCCGCTCATCAAACTaGTCCCACAGGTCGTCCCAGTCAGCGTCCGAAGGC +
Preference number: 3 (lower is better)
Translates to: HFLAFRYRRSSN*SHRSSQSASEG
Trigger: GCCTTCGGACGCTGACTGGGACGACCTGTGGGACCAGTTTGATGAGCGGCGGTATCTGAATGCCAAAAAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424136.5
3UTR CCA 72 bp ACAGCTTATAGGGGTCGTCACCAACGCGCCACTTTTTaGCATTCAGATACCGCCGCTCATCAAACTGGTCCC +
Preference number: 3 (lower is better)
Translates to: TAYRGRHQRATF*HSDTAAHQTGP
Trigger: GGGACCAGTTTGATGAGCGGCGGTATCTGAATGCCAAAAAGTGGCGCGTTGGTGACGACCCCTATAAGCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424136.5
ENST00000455477.5
3UTR-3UTR CAA 90 bp GACTGGCCAGGACTGGAACTTAACGGCCTTGAGAACATGTGGGATTTGTCTTTGGTGGTTGCAGGCTGCTaGCTGCCCAGTTTCCAGTCT +
Preference number: 3 (lower is better)
Translates to: DWPGLELNGLENMWDLSLVVAGC*LPSFQS
Trigger: AGACTGGAAACTGGGCAGCAAGCAGCCTGCAACCAC...CAAAGACAAATCCCACATGTTCTCAAGGCCGTTAAGTTCCAGTCCTGGCCAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
3UTR-3UTR CAA 90 bp ATGACTGGCCAGGACTGGAACTTAACGGCCTTGAGAACATGTGGGATTTGTCTTGGATGTCTGAGGTGGTaGCAGGCTGCTTGCTGCCCA +
Preference number: 3 (lower is better)
Translates to: MTGQDWNLTALRTCGICLGCLRW*QAACCP
Trigger: TGGGCAGCAAGCAGCCTGCAACCACCTCAGACATCC...AAGACAAATCCCACATGTTCTCAAGGCCGTTAAGTTCCAGTCCTGGCCAGTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
3UTR-3UTR CAA 90 bp ATACACCAGCAGTGTGCATCTCAGATGGCGAGTGTCCGGGATGGCCCGATTGCTACTTCCAAGCTGTCTTaGTTCAATCCTGGGTGTAGG +
Preference number: 3 (lower is better)
Translates to: IHQQCASQMASVRDGPIATSKLS*FNPGCR
Trigger: CCTACACCCAGGATTGAACAAAGACAGCTTGGAAGT...AGCAATCGGGCCATCCCGGACACTCGCCATCTGAGATGCACACTGCTGGTGTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424136.5
3UTR-3UTR CAA 90 bp ATTGCGCAAGCATTTCACCTTGGGCAACTTGATGAGCTGTTTACAGTCATCAGGTCCGGGATGGCCCGATaGCTGGAGATCCGCTCACTC +
Preference number: 3 (lower is better)
Translates to: IAQAFHLGQLDELFTVIRSGMAR*LEIRSL
Trigger: GAGTGAGCGGATCTCCAGCAATCGGGCCATCCCGGA...CCTGATGACTGTAAACAGCTCATCAAGTTGCCCAAGGTGAAATGCTTGCGCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424136.5
ENST00000455477.5
3UTR-3UTR CAA 90 bp AATACACCAGCAGTGTGCATCTCAGATGGCGAGTGTCCGGGATGGCCCGATTGCCTAACAGACTCCATCTaGCTTCTAACTTCCAAGCTG +
Preference number: 3 (lower is better)
Translates to: NTPAVCISDGECPGWPDCLTDSI*LLTSKL
Trigger: CAGCTTGGAAGTTAGAAGCAAGATGGAGTCTGTTAG...GCAATCGGGCCATCCCGGACACTCGCCATCTGAGATGCACACTGCTGGTGTATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424136.5
3UTR-3UTR CAA 90 bp TCCTGGCCTAGTGAAAAAGAAGGCTTTTCTTTCTGGCCTCCAGAGACTGCTTCCGAGAACATGTGGGATTaGTCTTTGAGCCCCATTGGC +
Preference number: 3 (lower is better)
Translates to: SWPSEKEGFSFWPPETASENMWD*SLSPIG
Trigger: GCCAATGGGGCTCAAAGACAAATCCCACATGTTCTC...GGAAGCAGTCTCTGGAGGCCAGAAAGAAAAGCCTTCTTTTTCACTAGGCCAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
3UTR CCA 72 bp TCTCCAGATACCAATCAGGGAATGACTGGCCAGGACTaGAACTTAACGGCCTTGAGAACATGTGGGATTTGT +
Preference number: 3 (lower is better)
Translates to: SPDTNQGMTGQD*NLTALRTCGIC
Trigger: ACAAATCCCACATGTTCTCAAGGCCGTTAAGTTCCAGTCCTGGCCAGTCATTCCCTGATTGGTATCTGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
3UTR CCA 72 bp CTTCAGCTGTCCGCTTGGTGTTCTTTATATACGTGTTaGCATTTCCATCAGGGAAAACGTAGGGGTGCTTCT +
Preference number: 3 (lower is better)
Translates to: LQLSAWCSLYTC*HFHQGKRRGAS
Trigger: AGAAGCACCCCTACGTTTTCCCTGATGGAAATGCCAACACGTATATAAAGAACACCAAGCGGACAGCTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455477.5
3UTR TCA 72 bp AACTTAACGGCCTTGAGAACATGTGGGATTTGTCTTTaGGCCCCATTGGCTTGTGATGTTTTCCTCTGTCCT +
Preference number: 3 (lower is better)
Translates to: NLTALRTCGICL*APLACDVFLCP
Trigger: AGGACAGAGGAAAACATCACAAGCCAATGGGGCTCAAAGACAAATCCCACATGTTCTCAAGGCCGTTAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CCA 90 bp TGCTGCCCAGTTTCCAGTCTGTTCTGGTCCAGGGAAGCACCACCCCATGGCCCTCCCGGCGGTCAGGGTTaGCGGGGCAGGAGTCCTGGC +
Preference number: 4 (lower is better)
Translates to: CCPVSSLFWSREAPPHGPPGGQG*RGRSPG
Trigger: GCCAGGACTCCTGCCCCGCCAACCCTGACCGCCGGG...AGGGCCATGGGGTGGTGCTTCCCTGGACCAGAACAGACTGGAAACTGGGCAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349752.10
CDS-3UTR TCA 90 bp GCTGCCCAGTTTCCAGTCTGTTCTGGTCCAGGGAAGCACCACCCCATGGCCCTTCACTGCGGATGGTCCTaGGCAGCGTGGAGCGGGCCT +
Preference number: 4 (lower is better)
Translates to: AAQFPVCSGPGKHHPMALHCGWS*AAWSGP
Trigger: AGGCCCGCTCCACGCTGCTCAGGACCATCCGCAGTG...AAGGGCCATGGGGTGGTGCTTCCCTGGACCAGAACAGACTGGAAACTGGGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR TCA 90 bp AGTGTCCGGGATGGCCCGATTGCTGGAGATCCGCTCACTCTCCCGCTGGTTGAACACTGCGGATGGTCCTaGGCAGCGTGGAGCGGGCCT +
Preference number: 4 (lower is better)
Translates to: SVRDGPIAGDPLTLPLVEHCGWS*AAWSGP
Trigger: AGGCCCGCTCCACGCTGCTCAGGACCATCCGCAGTG...TTCAACCAGCGGGAGAGTGAGCGGATCTCCAGCAATCGGGCCATCCCGGACACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424136.5
ENST00000455477.5
CDS-3UTR TCA 90 bp GCGATGTCAGCGCCCCGAATCCGGGACCGGACCAGACCTTGCCGTTCATTATTGCACTGCGGATGGTCCTaGGCAGCGTGGAGCGGGCCT +
Preference number: 4 (lower is better)
Translates to: AMSAPRIRDRTRPCRSLLHCGWS*AAWSGP
Trigger: AGGCCCGCTCCACGCTGCTCAGGACCATCCGCAGTG...CAATAATGAACGGCAAGGTCTGGTCCGGTCCCGGATTCGGGGCGCTGACATCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424136.5
ENST00000455477.5
CDS-3UTR GCA 90 bp TGCTGCCCAGTTTCCAGTCTGTTCTGGTCCAGGGAAGCACCACCCCATGGCCCTCCGCATGGTCCCCTTTaGCGCTTCCTCTCCGCGGCG +
Preference number: 4 (lower is better)
Translates to: CCPVSSLFWSREAPPHGPPHGPL*RFLSAA
Trigger: CGCCGCGGAGAGGAAGCGGCAAAGGGGACCATGCGG...AGGGCCATGGGGTGGTGCTTCCCTGGACCAGAACAGACTGGAAACTGGGCAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324589.9
ENST00000349752.10
CDS-3UTR GCA 90 bp AAGTCAGAGTGGTGCCCTGGGCGATGTCAGCGCCCCGAATCCGGGACCGGACCACCGGGATGGCCCGATTaGTGGAGATCCGCTCACTCT +
Preference number: 4 (lower is better)
Translates to: KSEWCPGRCQRPESGTGPPGWPD*WRSAHS
Trigger: AGAGTGAGCGGATCTCCAGCAATCGGGCCATCCCGG...TGGTCCGGTCCCGGATTCGGGGCGCTGACATCGCCCAGGGCACCACTCTGACTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424136.5
ENST00000455477.5
CDS-3UTR CCA 90 bp TACCGCCGCTCATCAAACTGGTCCCACAGGTCGTCCCAGTCAGCGTCCGAAGGCGTCAGAGTGGTGCCCTaGGCGATGTCAGCGCCCCGA +
Preference number: 4 (lower is better)
Translates to: YRRSSNWSHRSSQSASEGVRVVP*AMSAPR
Trigger: TCGGGGCGCTGACATCGCCCAGGGCACCACTCTGAC...GCCTTCGGACGCTGACTGGGACGACCTGTGGGACCAGTTTGATGAGCGGCGGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424136.5
CDS-3UTR CCA 90 bp GGAAAGTCAGAGTGGTGCCCTGGGCGATGTCAGCGCCCCGAATCCGGGACCGGACGCCGCTCATCAAACTaGTCCCACAGGTCGTCCCAG +
Preference number: 4 (lower is better)
Translates to: GKSEWCPGRCQRPESGTGRRSSN*SHRSSQ
Trigger: CTGGGACGACCTGTGGGACCAGTTTGATGAGCGGCG...TCCGGTCCCGGATTCGGGGCGCTGACATCGCCCAGGGCACCACTCTGACTTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424136.5
ENST00000455477.5
CDS-3UTR GCA 90 bp TGCTGCCCAGTTTCCAGTCTGTTCTGGTCCAGGGAAGCACCACCCCATGGCCCTAGGCGCCGAGCCTTCTaGTCTGGGGAGAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: CCPVSSLFWSREAPPHGPRRRAF*SGESCS
Trigger: GGAGCAGCTCTCCCCAGAGCAGAAGGCTCGGCGCCT...AGGGCCATGGGGTGGTGCTTCCCTGGACCAGAACAGACTGGAAACTGGGCAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CCA 90 bp TGCTGCCCAGTTTCCAGTCTGTTCTGGTCCAGGGAAGCACCACCCCATGGCCCTGCGAGCGCCTCGCTCTaGGGAGCTCTAGACCCAGGA +
Preference number: 4 (lower is better)
Translates to: CCPVSSLFWSREAPPHGPASASL*GALDPG
Trigger: TCCTGGGTCTAGAGCTCCCCAGAGCGAGGCGCTCGC...AGGGCCATGGGGTGGTGCTTCCCTGGACCAGAACAGACTGGAAACTGGGCAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349752.10
CDS-3UTR CCA 90 bp TGGCTGTCGAGGAAAGTCAGAGTGGTGCCCTGGGCGATGTCAGCGCCCCGAATCGGCGAGTGTCCGGGATaGCCCGATTGCTGGAGATCC +
Preference number: 4 (lower is better)
Translates to: WLSRKVRVVPWAMSAPRIGECPG*PDCWRS
Trigger: GGATCTCCAGCAATCGGGCCATCCCGGACACTCGCC...GATTCGGGGCGCTGACATCGCCCAGGGCACCACTCTGACTTTCCTCGACAGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424136.5
ENST00000455477.5
CDS-3UTR TCA 90 bp AGTCCAGGATGTCTGAGGTGGTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGCACTGCGGATGGTCCTaGGCAGCGTGGAGCGGGCCT +
Preference number: 4 (lower is better)
Translates to: SPGCLRWLQAACCPVSSLHCGWS*AAWSGP
Trigger: AGGCCCGCTCCACGCTGCTCAGGACCATCCGCAGTG...CAGACTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGACATCCTGGACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR GCA 90 bp TGGGCGATGTCAGCGCCCCGAATCCGGGACCGGACCAGACCTTGCCGTTCATTAGGAAAGTCAGAGTGGTaGCCTGGGCGATGTCAGCGC +
Preference number: 4 (lower is better)
Translates to: WAMSAPRIRDRTRPCRSLGKSEW*PGRCQR
Trigger: GCGCTGACATCGCCCAGGGCACCACTCTGACTTTCC...TAATGAACGGCAAGGTCTGGTCCGGTCCCGGATTCGGGGCGCTGACATCGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424136.5
ENST00000455477.5
CDS-3UTR CCA 90 bp TGCTGCCCAGTTTCCAGTCTGTTCTGGTCCAGGGAAGCACCACCCCATGGCCCTGAGTCAGGCGCCGCATaGTCCCCTTTGCCGCTTCCT +
Preference number: 4 (lower is better)
Translates to: CCPVSSLFWSREAPPHGPESGAA*SPLPLP
Trigger: AGGAAGCGGCAAAGGGGACCATGCGGCGCCTGACTC...AGGGCCATGGGGTGGTGCTTCCCTGGACCAGAACAGACTGGAAACTGGGCAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324589.9
ENST00000349752.10
CDS-3UTR TCA 90 bp GTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGTTCTGGTCCAGGGAAGCACCGTAGGGAGGAGTGGGTaGTACAGGCACCTGAGGCGC +
Preference number: 4 (lower is better)
Translates to: VAGCLLPSFQSVLVQGSTVGRSG*YRHLRR
Trigger: GCGCCTCAGGTGCCTGTATCACCCACTCCTCCCTAC...GGTGCTTCCCTGGACCAGAACAGACTGGAAACTGGGCAGCAAGCAGCCTGCAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324589.9
ENST00000406653.5
CDS-3UTR TCA 90 bp TCCAGGATGTCTGAGGTGGTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGTTCACTGCGGATGGTCCTaGGCAGCGTGGAGCGGGCCT +
Preference number: 4 (lower is better)
Translates to: SRMSEVVAGCLLPSFQSVHCGWS*AAWSGP
Trigger: AGGCCCGCTCCACGCTGCTCAGGACCATCCGCAGTG...AACAGACTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGACATCCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CCA 90 bp AGTCCAGGATGTCTGAGGTGGTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGGTCAGAGTGGTGCCCTaGGCGATGTCAGCGCCCCGA +
Preference number: 4 (lower is better)
Translates to: SPGCLRWLQAACCPVSSLVRVVP*AMSAPR
Trigger: TCGGGGCGCTGACATCGCCCAGGGCACCACTCTGAC...CAGACTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGACATCCTGGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CCA 90 bp CTCACAGTGGCTGTCGAGGAAAGTCAGAGTGGTGCCCTGGGCGATGTCAGCGCCCCTCTCCAGGGCGAATaGCCGGGCAGCGTAATAGTA +
Preference number: 4 (lower is better)
Translates to: LTVAVEESQSGALGDVSAPLQGE*PGSVIV
Trigger: TACTATTACGCTGCCCGGCCATTCGCCCTGGAGAGG...GGCGCTGACATCGCCCAGGGCACCACTCTGACTTTCCTCGACAGCCACTGTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455477.5
CDS-3UTR CCA 90 bp GCTGCCCAGTTTCCAGTCTGTTCTGGTCCAGGGAAGCACCACCCCATGGCCCTTGGAAGCACCACCCCATaGCCCTTGCTGCTTCTGGCA +
Preference number: 4 (lower is better)
Translates to: AAQFPVCSGPGKHHPMALGSTTP*PLLLLA
Trigger: TGCCAGAAGCAGCAAGGGCCATGGGGTGGTGCTTCC...AAGGGCCATGGGGTGGTGCTTCCCTGGACCAGAACAGACTGGAAACTGGGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR TCA 90 bp GCGATGTCAGCGCCCCGAATCCGGGACCGGACCAGACCTTGCCGTTCATTATTGAGAACAGCAGCACCGTaGTCCAGAGCACCCCGAAGA +
Preference number: 4 (lower is better)
Translates to: AMSAPRIRDRTRPCRSLLRTAAP*SRAPRR
Trigger: TCTTCGGGGTGCTCTGGATCACGGTGCTGCTGTTCT...CAATAATGAACGGCAAGGTCTGGTCCGGTCCCGGATTCGGGGCGCTGACATCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424136.5
ENST00000455477.5
CDS-3UTR TCA 90 bp AACATTCCCGAAGGGCCTCTCCAGGGCGAATGGCCGGGCAGCGTAATAGTATTGGTAGGGAGGAGTGGGTaGTACAGGCACCTGAGGCGC +
Preference number: 4 (lower is better)
Translates to: NIPEGPLQGEWPGSVIVLVGRSG*YRHLRR
Trigger: GCGCCTCAGGTGCCTGTATCACCCACTCCTCCCTAC...CAATACTATTACGCTGCCCGGCCATTCGCCCTGGAGAGGCCCTTCGGGAATGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455477.5
CDS-3UTR TCA 90 bp GCTGCCCAGTTTCCAGTCTGTTCTGGTCCAGGGAAGCACCACCCCATGGCCCTTCCAGTCCAGGATGTCTaGGGTGGTTGCAGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: AAQFPVCSGPGKHHPMALPVQDV*GGCRLL
Trigger: AAGCAGCCTGCAACCACCTCAGACATCCTGGACTGG...AAGGGCCATGGGGTGGTGCTTCCCTGGACCAGAACAGACTGGAAACTGGGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR GCA 90 bp CTGGGCGATGTCAGCGCCCCGAATCCGGGACCGGACCAGACCTTGCCGTTCATTGACCGGACCAGACCTTaGCGTTCATTATTGCGCAAG +
Preference number: 4 (lower is better)
Translates to: LGDVSAPNPGPDQTLPFIDRTRP*RSLLRK
Trigger: CTTGCGCAATAATGAACGGCAAGGTCTGGTCCGGTC...AATGAACGGCAAGGTCTGGTCCGGTCCCGGATTCGGGGCGCTGACATCGCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424136.5
ENST00000455477.5
CDS-3UTR GCA 90 bp GCTGCCCAGTTTCCAGTCTGTTCTGGTCCAGGGAAGCACCACCCCATGGCCCTTGAGGTGGTTGCAGGCTaGTTGCTGCCCAGTTTCCAG +
Preference number: 4 (lower is better)
Translates to: AAQFPVCSGPGKHHPMALEVVAG*LLPSFQ
Trigger: CTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTC...AAGGGCCATGGGGTGGTGCTTCCCTGGACCAGAACAGACTGGAAACTGGGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR GCA 90 bp GTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGTTCTGGTCCAGGGAAGCACCCCGGGATGGCCCGATTaGTGGAGATCCGCTCACTCT +
Preference number: 4 (lower is better)
Translates to: VAGCLLPSFQSVLVQGSTPGWPD*WRSAHS
Trigger: AGAGTGAGCGGATCTCCAGCAATCGGGCCATCCCGG...GGTGCTTCCCTGGACCAGAACAGACTGGAAACTGGGCAGCAAGCAGCCTGCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CCA 90 bp TCCAGGATGTCTGAGGTGGTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGTTGTCAGAGTGGTGCCCTaGGCGATGTCAGCGCCCCGA +
Preference number: 4 (lower is better)
Translates to: SRMSEVVAGCLLPSFQSVVRVVP*AMSAPR
Trigger: TCGGGGCGCTGACATCGCCCAGGGCACCACTCTGAC...AACAGACTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGACATCCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CCA 90 bp AGTGTCCGGGATGGCCCGATTGCTGGAGATCCGCTCACTCTCCCGCTGGTTGAACGAGGAAAGTCAGAGTaGTGCCCTGGGCGATGTCAG +
Preference number: 4 (lower is better)
Translates to: SVRDGPIAGDPLTLPLVERGKSE*CPGRCQ
Trigger: CTGACATCGCCCAGGGCACCACTCTGACTTTCCTCG...TTCAACCAGCGGGAGAGTGAGCGGATCTCCAGCAATCGGGCCATCCCGGACACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424136.5
ENST00000455477.5
CDS-3UTR CCA 90 bp TGCTGCCCAGTTTCCAGTCTGTTCTGGTCCAGGGAAGCACCACCCCATGGCCCTCTGTGCAACAGAGGCTaGAGCCAGTCCCTGTTCACC +
Preference number: 4 (lower is better)
Translates to: CCPVSSLFWSREAPPHGPLCNRG*SQSLFT
Trigger: GGTGAACAGGGACTGGCTCCAGCCTCTGTTGCACAG...AGGGCCATGGGGTGGTGCTTCCCTGGACCAGAACAGACTGGAAACTGGGCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CCA 90 bp GTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGTTCTGGTCCAGGGAAGCACCGGAAGCACCACCCCATaGCCCTTGCTGCTTCTGGCA +
Preference number: 4 (lower is better)
Translates to: VAGCLLPSFQSVLVQGSTGSTTP*PLLLLA
Trigger: TGCCAGAAGCAGCAAGGGCCATGGGGTGGTGCTTCC...GGTGCTTCCCTGGACCAGAACAGACTGGAAACTGGGCAGCAAGCAGCCTGCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CCA 90 bp GCTGCCCAGTTTCCAGTCTGTTCTGGTCCAGGGAAGCACCACCCCATGGCCCTTCCAGGATGTCTGAGGTaGTTGCAGGCTGCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: AAQFPVCSGPGKHHPMALPGCLR*LQAACC
Trigger: GCAGCAAGCAGCCTGCAACCACCTCAGACATCCTGG...AAGGGCCATGGGGTGGTGCTTCCCTGGACCAGAACAGACTGGAAACTGGGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CCA 90 bp TCCAGGATGTCTGAGGTGGTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGTTGACCCAGGATCCGGTTaGAGGGGCGGCAGGATCCTG +
Preference number: 4 (lower is better)
Translates to: SRMSEVVAGCLLPSFQSVDPGSG*RGGRIL
Trigger: CAGGATCCTGCCGCCCCTCCAACCGGATCCTGGGTC...AACAGACTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGACATCCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349752.10
CDS-3UTR CCA 90 bp AGATACCAATCAGGGAATGACTGGCCAGGACTGGAACTTAACGGCCTTGAGAACGCGGGGCAGGAGTCCTaGCGAGCGCCTCGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: RYQSGNDWPGLELNGLENAGQES*RAPRSG
Trigger: CCCAGAGCGAGGCGCTCGCCAGGACTCCTGCCCCGC...GTTCTCAAGGCCGTTAAGTTCCAGTCCTGGCCAGTCATTCCCTGATTGGTATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349752.10
CDS-3UTR CCA 90 bp GTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGTTCTGGTCCAGGGAAGCACCCGCCGCTCATCAAACTaGTCCCACAGGTCGTCCCAG +
Preference number: 4 (lower is better)
Translates to: VAGCLLPSFQSVLVQGSTRRSSN*SHRSSQ
Trigger: CTGGGACGACCTGTGGGACCAGTTTGATGAGCGGCG...GGTGCTTCCCTGGACCAGAACAGACTGGAAACTGGGCAGCAAGCAGCCTGCAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CCA 90 bp GTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGTTCTGGTCCAGGGAAGCACCGGATGGCCCGATTGCTaGAGATCCGCTCACTCTCCC +
Preference number: 4 (lower is better)
Translates to: VAGCLLPSFQSVLVQGSTGWPDC*RSAHSP
Trigger: GGGAGAGTGAGCGGATCTCCAGCAATCGGGCCATCC...GGTGCTTCCCTGGACCAGAACAGACTGGAAACTGGGCAGCAAGCAGCCTGCAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349752.10
ENST00000406653.5
3UTR CAA 72 bp GTGCATCTCAGATGGCGAGTGTCCGGGATGGCCCGATaGCTGGAGATCCGCTCACTCTCCCGCTGGTTGAAA +
Preference number: 4 (lower is better)
Translates to: VHLRWRVSGMAR*LEIRSLSRWLK
Trigger: TTTCAACCAGCGGGAGAGTGAGCGGATCTCCAGCAATCGGGCCATCCCGGACACTCGCCATCTGAGATGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424136.5
ENST00000455477.5
CDS-3UTR TCA 90 bp TGCTGCCCAGTTTCCAGTCTGTTCTGGTCCAGGGAAGCACCACCCCATGGCCCTTCTGCTGGGTGTATGTaGAGGCCCATACCTGGGACT +
Preference number: 4 (lower is better)
Translates to: CCPVSSLFWSREAPPHGPSAGCM*RPIPGT
Trigger: AGTCCCAGGTATGGGCCTTCACATACACCCAGCAGA...AGGGCCATGGGGTGGTGCTTCCCTGGACCAGAACAGACTGGAAACTGGGCAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR TCA 90 bp GCTGCCCAGTTTCCAGTCTGTTCTGGTCCAGGGAAGCACCACCCCATGGCCCTTGTGCTGGCTCATGAGTaGGGACTCACATGGGTTGAC +
Preference number: 4 (lower is better)
Translates to: AAQFPVCSGPGKHHPMALVLAHE*GLTWVD
Trigger: GTCAACCCATGTGAGTCCTCACTCATGAGCCAGCAC...AAGGGCCATGGGGTGGTGCTTCCCTGGACCAGAACAGACTGGAAACTGGGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR GCA 90 bp GGATGTCTGAGGTGGTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGTTCTGGGGAAAGTCAGAGTGGTaGCCTGGGCGATGTCAGCGC +
Preference number: 4 (lower is better)
Translates to: GCLRWLQAACCPVSSLFWGKSEW*PGRCQR
Trigger: GCGCTGACATCGCCCAGGGCACCACTCTGACTTTCC...CCAGAACAGACTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGACATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR GCA 90 bp AGTCCAGGATGTCTGAGGTGGTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGGGAAAGTCAGAGTGGTaGCCTGGGCGATGTCAGCGC +
Preference number: 4 (lower is better)
Translates to: SPGCLRWLQAACCPVSSLGKSEW*PGRCQR
Trigger: GCGCTGACATCGCCCAGGGCACCACTCTGACTTTCC...CAGACTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGACATCCTGGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR GCA 90 bp TCTGAGGTGGTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGTTCTGGTCCAGGGAAAGTCAGAGTGGTaGCCTGGGCGATGTCAGCGC +
Preference number: 4 (lower is better)
Translates to: SEVVAGCLLPSFQSVLVQGKSEW*PGRCQR
Trigger: GCGCTGACATCGCCCAGGGCACCACTCTGACTTTCC...CTGGACCAGAACAGACTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR GCA 90 bp GATGGCCCGATTGCTGGAGATCCGCTCACTCTCCCGCTGGTTGAAAGCATACAGGGAAAGTCAGAGTGGTaGCCTGGGCGATGTCAGCGC +
Preference number: 4 (lower is better)
Translates to: DGPIAGDPLTLPLVESIQGKSEW*PGRCQR
Trigger: GCGCTGACATCGCCCAGGGCACCACTCTGACTTTCC...CTGTATGCTTTCAACCAGCGGGAGAGTGAGCGGATCTCCAGCAATCGGGCCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424136.5
ENST00000455477.5
CDS-3UTR GCA 90 bp GCTGCCCAGTTTCCAGTCTGTTCTGGTCCAGGGAAGCACCACCCCATGGCCCTTTCCTCTTTGACCCTGTaGAACAGAGGCTGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: AAQFPVCSGPGKHHPMALSSLTL*NRGWSQ
Trigger: CTGGCTCCAGCCTCTGTTGCACAGGGTCAAAGAGGA...AAGGGCCATGGGGTGGTGCTTCCCTGGACCAGAACAGACTGGAAACTGGGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR GCA 90 bp CAGTGTGCATCTCAGATGGCGAGTGTCCGGGATGGCCCGATTGCTGGAGATCCGTCCTCTTTGACCCTGTaGAACAGAGGCTGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: QCASQMASVRDGPIAGDPSSLTL*NRGWSQ
Trigger: CTGGCTCCAGCCTCTGTTGCACAGGGTCAAAGAGGA...CGGATCTCCAGCAATCGGGCCATCCCGGACACTCGCCATCTGAGATGCACACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424136.5
CDS-3UTR GCA 90 bp GCTGCCCAGTTTCCAGTCTGTTCTGGTCCAGGGAAGCACCACCCCATGGCCCTTTCCTCCTGGAGGATCTaGTGGGTGTATGTGAAGGCC +
Preference number: 4 (lower is better)
Translates to: AAQFPVCSGPGKHHPMALSSWRI*WVYVKA
Trigger: GGCCTTCACATACACCCAGCAGATCCTCCAGGAGGA...AAGGGCCATGGGGTGGTGCTTCCCTGGACCAGAACAGACTGGAAACTGGGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR GCA 90 bp TCTGAGGTGGTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGTTCTGGTCCAGCCGGGATGGCCCGATTaGTGGAGATCCGCTCACTCT +
Preference number: 4 (lower is better)
Translates to: SEVVAGCLLPSFQSVLVQPGWPD*WRSAHS
Trigger: AGAGTGAGCGGATCTCCAGCAATCGGGCCATCCCGG...CTGGACCAGAACAGACTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CCA 90 bp AGTCCAGGATGTCTGAGGTGGTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGGAGCACCCCGAAGACTaGCAGAACCAGCCGACGAGT +
Preference number: 4 (lower is better)
Translates to: SPGCLRWLQAACCPVSSLEHPED*QNQPTS
Trigger: ACTCGTCGGCTGGTTCTGCCAGTCTTCGGGGTGCTC...CAGACTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGACATCCTGGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324589.9
ENST00000349752.10
CDS-3UTR CCA 90 bp TATAGGGGTCGTCACCAACGCGCCACTTTTTGGCATTCAGATACCGCCGCTCATGTCAGAGTGGTGCCCTaGGCGATGTCAGCGCCCCGA +
Preference number: 4 (lower is better)
Translates to: YRGRHQRATFWHSDTAAHVRVVP*AMSAPR
Trigger: TCGGGGCGCTGACATCGCCCAGGGCACCACTCTGAC...ATGAGCGGCGGTATCTGAATGCCAAAAAGTGGCGCGTTGGTGACGACCCCTATA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000424136.5
ENST00000455477.5
CDS-3UTR CCA 90 bp GGATGTCTGAGGTGGTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGTTCTGGGGCCCTTGCTGCTTCTaGCAGGGGTCCTCAAGAGCT +
Preference number: 4 (lower is better)
Translates to: GCLRWLQAACCPVSSLFWGPCCF*QGSSRA
Trigger: AGCTCTTGAGGACCCCTGCCAGAAGCAGCAAGGGCC...CCAGAACAGACTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGACATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CCA 90 bp TCCTGGCCTAGTGAAAAAGAAGGCTTTTCTTTCTGGCCTCCAGAGACTGCTTCCCGAGGGCAGCCAAGCTaGACGCCCGCTCCAGCGGGA +
Preference number: 4 (lower is better)
Translates to: SWPSEKEGFSFWPPETASRGQPS*TPAPAG
Trigger: TCCCGCTGGAGCGGGCGTCCAGCTTGGCTGCCCTCG...GGAAGCAGTCTCTGGAGGCCAGAAAGAAAAGCCTTCTTTTTCACTAGGCCAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000349752.10
CDS-3UTR CCA 90 bp GGATGTCTGAGGTGGTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGTTCTGGCGCCGCTCATCAAACTaGTCCCACAGGTCGTCCCAG +
Preference number: 4 (lower is better)
Translates to: GCLRWLQAACCPVSSLFWRRSSN*SHRSSQ
Trigger: CTGGGACGACCTGTGGGACCAGTTTGATGAGCGGCG...CCAGAACAGACTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGACATCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CCA 90 bp TCTGAGGTGGTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGTTCTGGTCCAGGGATGGCCCGATTGCTaGAGATCCGCTCACTCTCCC +
Preference number: 4 (lower is better)
Translates to: SEVVAGCLLPSFQSVLVQGWPDC*RSAHSP
Trigger: GGGAGAGTGAGCGGATCTCCAGCAATCGGGCCATCC...CTGGACCAGAACAGACTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CCA 90 bp GTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGTTCTGGTCCAGGGAAGCACCAGTGTGCATCTCAGATaGCGAGTGTCCGGGATGGCC +
Preference number: 4 (lower is better)
Translates to: VAGCLLPSFQSVLVQGSTSVHLR*RVSGMA
Trigger: GGCCATCCCGGACACTCGCCATCTGAGATGCACACT...GGTGCTTCCCTGGACCAGAACAGACTGGAAACTGGGCAGCAAGCAGCCTGCAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349752.10
ENST00000406653.5
CDS-3UTR TCA 90 bp GGATGTCTGAGGTGGTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGTTCTGGAGAACAGCAGCACCGTaGTCCAGAGCACCCCGAAGA +
Preference number: 4 (lower is better)
Translates to: GCLRWLQAACCPVSSLFWRTAAP*SRAPRR
Trigger: TCTTCGGGGTGCTCTGGATCACGGTGCTGCTGTTCT...CCAGAACAGACTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGACATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324589.9
ENST00000349752.10
CDS-3UTR TCA 90 bp CGGATCAGATGCGTAGGGGTGCGGTTTAATACACTGCGGATGGTCCTGAGCAGCAGAACAGCAGCACCGTaGTCCAGAGCACCCCGAAGA +
Preference number: 4 (lower is better)
Translates to: RIRCVGVRFNTLRMVLSSRTAAP*SRAPRR
Trigger: TCTTCGGGGTGCTCTGGATCACGGTGCTGCTGTTCT...GCTGCTCAGGACCATCCGCAGTGTATTAAACCGCACCCCTACGCATCTGATCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424136.5
ENST00000455477.5
CDS-3UTR TCA 90 bp GTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGTTCTGGTCCAGGGAAGCACCGCGTGTAGTCCTCTTTaGCCCTGTGCAACAGAGGCT +
Preference number: 4 (lower is better)
Translates to: VAGCLLPSFQSVLVQGSTACSPL*PCATEA
Trigger: AGCCTCTGTTGCACAGGGTCAAAGAGGACTACACGC...GGTGCTTCCCTGGACCAGAACAGACTGGAAACTGGGCAGCAAGCAGCCTGCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR TCA 90 bp GTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGTTCTGGTCCAGGGAAGCACCTCTCCAGGTACCACTTaGAGCTCTGGCAGCGCAGAT +
Preference number: 4 (lower is better)
Translates to: VAGCLLPSFQSVLVQGSTSPGTT*SSGSAD
Trigger: ATCTGCGCTGCCAGAGCTTCAAGTGGTACCTGGAGA...GGTGCTTCCCTGGACCAGAACAGACTGGAAACTGGGCAGCAAGCAGCCTGCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR TCA 90 bp TCCCAGTCCAGGATGTCTGAGGTGGTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGCTGGGTGTATGTaGAGGCCCATACCTGGGACT +
Preference number: 4 (lower is better)
Translates to: SQSRMSEVVAGCLLPSFQSAGCM*RPIPGT
Trigger: AGTCCCAGGTATGGGCCTTCACATACACCCAGCAGA...CTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGACATCCTGGACTGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR TCA 90 bp GGATGTCTGAGGTGGTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGTTCTGGCCAGTCCAGGATGTCTaGGGTGGTTGCAGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: GCLRWLQAACCPVSSLFWPVQDV*GGCRLL
Trigger: AAGCAGCCTGCAACCACCTCAGACATCCTGGACTGG...CCAGAACAGACTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGACATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR GCA 90 bp GACTGGCCAGGACTGGAACTTAACGGCCTTGAGAACATGTGGGATTTGTCTTTGCCGCATGGTCCCCTTTaGCGCTTCCTCTCCGCGGCG +
Preference number: 4 (lower is better)
Translates to: DWPGLELNGLENMWDLSLPHGPL*RFLSAA
Trigger: CGCCGCGGAGAGGAAGCGGCAAAGGGGACCATGCGG...CAAAGACAAATCCCACATGTTCTCAAGGCCGTTAAGTTCCAGTCCTGGCCAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324589.9
ENST00000349752.10
CDS-3UTR GCA 90 bp AGGATGTCTGAGGTGGTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGTTCTGTGCTCTGGGGAGAGCTaGTCCCACTGGAAGTGGAGG +
Preference number: 4 (lower is better)
Translates to: RMSEVVAGCLLPSFQSVLCSGES*SHWKWR
Trigger: CCTCCACTTCCAGTGGGAGCAGCTCTCCCCAGAGCA...CAGAACAGACTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGACATCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR GCA 90 bp TCTCCAGATACCAATCAGGGAATGACTGGCCAGGACTGGAACTTAACGGCCTTGAGGCGCCGAGCCTTCTaGTCTGGGGAGAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: SPDTNQGMTGQDWNLTALRRRAF*SGESCS
Trigger: GGAGCAGCTCTCCCCAGAGCAGAAGGCTCGGCGCCT...CAAGGCCGTTAAGTTCCAGTCCTGGCCAGTCATTCCCTGATTGGTATCTGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR GCA 90 bp AGGATGTCTGAGGTGGTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGTTCTGGAAGGCTTAGGGGTCTaGACTTCAGGTCCCGTCGGC +
Preference number: 4 (lower is better)
Translates to: RMSEVVAGCLLPSFQSVLEGLGV*TSGPVG
Trigger: GCCGACGGGACCTGAAGTGCAGACCCCTAAGCCTTC...CAGAACAGACTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGACATCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349752.10
CDS-3UTR GCA 90 bp CTCCCGCTGGTTGAAAGCATACAGCTTATAGGGGTCGTCACCAACGCGCCACTTCCGGGATGGCCCGATTaGTGGAGATCCGCTCACTCT +
Preference number: 4 (lower is better)
Translates to: LPLVESIQLIGVVTNAPLPGWPD*WRSAHS
Trigger: AGAGTGAGCGGATCTCCAGCAATCGGGCCATCCCGG...AAGTGGCGCGTTGGTGACGACCCCTATAAGCTGTATGCTTTCAACCAGCGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424136.5
ENST00000455477.5
CDS-3UTR GCA 90 bp GCGATGTCAGCGCCCCGAATCCGGGACCGGACCAGACCTTGCCGTTCATTATTGTTCTCTTTGACCCTGTaGAACAGAGGCTGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: AMSAPRIRDRTRPCRSLLFSLTL*NRGWSQ
Trigger: CTGGCTCCAGCCTCTGTTGCACAGGGTCAAAGAGAA...CAATAATGAACGGCAAGGTCTGGTCCGGTCCCGGATTCGGGGCGCTGACATCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455477.5
CDS-3UTR CCA 90 bp AGTGGTGCCCTGGGCGATGTCAGCGCCCCGAATCCGGGACCGGACCAGACCTTGCTTCAGCTGTCCGCTTaGTGTTCTTTATATACGTGT +
Preference number: 4 (lower is better)
Translates to: SGALGDVSAPNPGPDQTLLQLSA*CSLYTC
Trigger: ACACGTATATAAAGAACACCAAGCGGACAGCTGAAG...CAAGGTCTGGTCCGGTCCCGGATTCGGGGCGCTGACATCGCCCAGGGCACCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455477.5
CDS-3UTR CCA 90 bp GCTGCCCAGTTTCCAGTCTGTTCTGGTCCAGGGAAGCACCACCCCATGGCCCTTTATTGCCCTTCTGGATaGAGGACTCCTTGGGGATGC +
Preference number: 4 (lower is better)
Translates to: AAQFPVCSGPGKHHPMALYCPSG*RTPWGC
Trigger: GCATCCCCAAGGAGTCCTCCATCCAGAAGGGCAATA...AAGGGCCATGGGGTGGTGCTTCCCTGGACCAGAACAGACTGGAAACTGGGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CCA 90 bp TCCCAGTCCAGGATGTCTGAGGTGGTTGCAGGCTGCTTGCTGCCCAGTTTCCAGCGGATATTGCCCTTCTaGATGGAGGACTCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: SQSRMSEVVAGCLLPSFQRILPF*MEDSLG
Trigger: CCCCAAGGAGTCCTCCATCCAGAAGGGCAATATCCG...CTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGACATCCTGGACTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CCA 90 bp GTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGTTCTGGTCCAGGGAAGCACCGTTTCCAGTCTGTTCTaGTCCAGGGAAGCACCACCC +
Preference number: 4 (lower is better)
Translates to: VAGCLLPSFQSVLVQGSTVSSLF*SREAPP
Trigger: GGGTGGTGCTTCCCTGGACCAGAACAGACTGGAAAC...GGTGCTTCCCTGGACCAGAACAGACTGGAAACTGGGCAGCAAGCAGCCTGCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CCA 90 bp TCTCCAGATACCAATCAGGGAATGACTGGCCAGGACTGGAACTTAACGGCCTTGGCGGGAGAAGCGCGGTaGCTGCCGAGATGTTCCCCA +
Preference number: 4 (lower is better)
Translates to: SPDTNQGMTGQDWNLTALAGEAR*LPRCSP
Trigger: TGGGGAACATCTCGGCAGCCACCGCGCTTCTCCCGC...CAAGGCCGTTAAGTTCCAGTCCTGGCCAGTCATTCCCTGATTGGTATCTGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349752.10
CDS-3UTR CCA 90 bp AGATACCAATCAGGGAATGACTGGCCAGGACTGGAACTTAACGGCCTTGAGAACGGGCGACCCGAAACGTaGCAGGGAAGGACCGAGGGC +
Preference number: 4 (lower is better)
Translates to: RYQSGNDWPGLELNGLENGRPET*QGRTEG
Trigger: GCCCTCGGTCCTTCCCTGCCACGTTTCGGGTCGCCC...GTTCTCAAGGCCGTTAAGTTCCAGTCCTGGCCAGTCATTCCCTGATTGGTATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349752.10
CDS-3UTR CCA 90 bp GCTGCCCAGTTTCCAGTCTGTTCTGGTCCAGGGAAGCACCACCCCATGGCCCTTCAACGCGCCACTTTTTaGCATTCAGATACCGCCGCT +
Preference number: 4 (lower is better)
Translates to: AAQFPVCSGPGKHHPMALQRATF*HSDTAA
Trigger: AGCGGCGGTATCTGAATGCCAAAAAGTGGCGCGTTG...AAGGGCCATGGGGTGGTGCTTCCCTGGACCAGAACAGACTGGAAACTGGGCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CCA 90 bp CCTCACAGTGGCTGTCGAGGAAAGTCAGAGTGGTGCCCTGGGCGATGTCAGCGCCGCTCACTCTCCCGCTaGTTGAAAGCATACAGCTTA +
Preference number: 4 (lower is better)
Translates to: PHSGCRGKSEWCPGRCQRRSLSR*LKAYSL
Trigger: TAAGCTGTATGCTTTCAACCAGCGGGAGAGTGAGCG...GCGCTGACATCGCCCAGGGCACCACTCTGACTTTCCTCGACAGCCACTGTGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424136.5
ENST00000455477.5
CDS-3UTR CCA 90 bp CCAACGCGCCACTTTTTGGCATTCAGATACCGCCGCTCATCAAACTGGTCCCACGGATGGCCCGATTGCTaGAGATCCGCTCACTCTCCC +
Preference number: 4 (lower is better)
Translates to: PTRHFLAFRYRRSSNWSHGWPDC*RSAHSP
Trigger: GGGAGAGTGAGCGGATCTCCAGCAATCGGGCCATCC...GTGGGACCAGTTTGATGAGCGGCGGTATCTGAATGCCAAAAAGTGGCGCGTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424136.5
ENST00000455477.5
CDS-3UTR CCA 90 bp ATGGCCCGATTGCTGGAGATCCGCTCACTCTCCCGCTGGTTGAAAGCATACAGCAGTGTGCATCTCAGATaGCGAGTGTCCGGGATGGCC +
Preference number: 4 (lower is better)
Translates to: MARLLEIRSLSRWLKAYSSVHLR*RVSGMA
Trigger: GGCCATCCCGGACACTCGCCATCTGAGATGCACACT...GCTGTATGCTTTCAACCAGCGGGAGAGTGAGCGGATCTCCAGCAATCGGGCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424136.5
ENST00000455477.5
3UTR CAA 72 bp TCCCAGTCCAGGATGTCTGAGGTGGTTGCAGGCTGCTaGCTGCCCAGTTTCCAGTCTGTTCTGGTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: SQSRMSEVVAGC*LPSFQSVLVQG
Trigger: TCCCTGGACCAGAACAGACTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGACATCCTGGACTGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR TCA 90 bp CGGATCAGATGCGTAGGGGTGCGGTTTAATACACTGCGGATGGTCCTGAGCAGCGCGTGTAGTCCTCTTTaGCCCTGTGCAACAGAGGCT +
Preference number: 4 (lower is better)
Translates to: RIRCVGVRFNTLRMVLSSACSPL*PCATEA
Trigger: AGCCTCTGTTGCACAGGGTCAAAGAGGACTACACGC...GCTGCTCAGGACCATCCGCAGTGTATTAAACCGCACCCCTACGCATCTGATCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424136.5
CDS-3UTR TCA 90 bp TCTGAGGTGGTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGTTCTGGTCCAGTCTCCAGGTACCACTTaGAGCTCTGGCAGCGCAGAT +
Preference number: 4 (lower is better)
Translates to: SEVVAGCLLPSFQSVLVQSPGTT*SSGSAD
Trigger: ATCTGCGCTGCCAGAGCTTCAAGTGGTACCTGGAGA...CTGGACCAGAACAGACTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR TCA 90 bp GGATGTCTGAGGTGGTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGTTCTGGTCTGCTGGGTGTATGTaGAGGCCCATACCTGGGACT +
Preference number: 4 (lower is better)
Translates to: GCLRWLQAACCPVSSLFWSAGCM*RPIPGT
Trigger: AGTCCCAGGTATGGGCCTTCACATACACCCAGCAGA...CCAGAACAGACTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGACATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR TCA 90 bp GGATGTCTGAGGTGGTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGTTCTGGGAACAAGGTGATGACTaGCAGGCACAGCTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: GCLRWLQAACCPVSSLFWEQGDD*QAQLLL
Trigger: CAGGAGGAGCTGTGCCTGTCAGTCATCACCTTGTTC...CCAGAACAGACTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGACATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR TCA 90 bp TCTGAGGTGGTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGTTCTGGTCCAGGTGCTGGCTCATGAGTaGGGACTCACATGGGTTGAC +
Preference number: 4 (lower is better)
Translates to: SEVVAGCLLPSFQSVLVQVLAHE*GLTWVD
Trigger: GTCAACCCATGTGAGTCCTCACTCATGAGCCAGCAC...CTGGACCAGAACAGACTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR TCA 90 bp GGATGTCTGAGGTGGTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGTTCTGGGTGCTGGCTCATGAGTaGGGACTCACATGGGTTGAC +
Preference number: 4 (lower is better)
Translates to: GCLRWLQAACCPVSSLFWVLAHE*GLTWVD
Trigger: GTCAACCCATGTGAGTCCTCACTCATGAGCCAGCAC...CCAGAACAGACTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGACATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR TCA 90 bp TCTGAGGTGGTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGTTCTGGTCCAGTTCCTCTGTCCTCCCTaGGACAGTTGCTCCTGTCCT +
Preference number: 4 (lower is better)
Translates to: SEVVAGCLLPSFQSVLVQFLCPP*DSCSCP
Trigger: AGGACAGGAGCAACTGTCTCAGGGAGGACAGAGGAA...CTGGACCAGAACAGACTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR GCA 90 bp AGTCCAGGATGTCTGAGGTGGTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGTCCTCTTTGACCCTGTaGAACAGAGGCTGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: SPGCLRWLQAACCPVSSLSSLTL*NRGWSQ
Trigger: CTGGCTCCAGCCTCTGTTGCACAGGGTCAAAGAGGA...CAGACTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGACATCCTGGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR GCA 90 bp TGCTGCCCAGTTTCCAGTCTGTTCTGGTCCAGGGAAGCACCACCCCATGGCCCTAGGTGGGATGCTATGTaGTCGATGTGGGAACCAGTT +
Preference number: 4 (lower is better)
Translates to: CCPVSSLFWSREAPPHGPRWDAM*SMWEPV
Trigger: AACTGGTTCCCACATCGAGCACATAGCATCCCACCT...AGGGCCATGGGGTGGTGCTTCCCTGGACCAGAACAGACTGGAAACTGGGCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR GCA 90 bp GGATGTCTGAGGTGGTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGTTCTGGGAGGCAGAGGTGGGATaGTATGTGCTCGATGTGGGA +
Preference number: 4 (lower is better)
Translates to: GCLRWLQAACCPVSSLFWEAEVG*YVLDVG
Trigger: TCCCACATCGAGCACATAGCATCCCACCTCTGCCTC...CCAGAACAGACTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGACATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR GCA 90 bp TCCCAGTCCAGGATGTCTGAGGTGGTTGCAGGCTGCTTGCTGCCCAGTTTCCAGCCTTGCCGTTCTCGGTaGCATCACCGAACATATCTG +
Preference number: 4 (lower is better)
Translates to: SQSRMSEVVAGCLLPSFQPCRSR*HHRTYL
Trigger: CAGATATGTTCGGTGATGGCACCGAGAACGGCAAGG...CTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGACATCCTGGACTGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR GCA 90 bp AGTCCAGGATGTCTGAGGTGGTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGTGGTTGCAGGCTGCTTaGTGCCCAGTTTCCAGTCTG +
Preference number: 4 (lower is better)
Translates to: SPGCLRWLQAACCPVSSLWLQAA*CPVSSL
Trigger: CAGACTGGAAACTGGGCAGCAAGCAGCCTGCAACCA...CAGACTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGACATCCTGGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR GCA 90 bp GACTGGCCAGGACTGGAACTTAACGGCCTTGAGAACATGTGGGATTTGTCTTTGGAGAAGCGCGGTGGCTaGCGAGATGTTCCCCACGCC +
Preference number: 4 (lower is better)
Translates to: DWPGLELNGLENMWDLSLEKRGG*RDVPHA
Trigger: GGCGTGGGGAACATCTCGGCAGCCACCGCGCTTCTC...CAAAGACAAATCCCACATGTTCTCAAGGCCGTTAAGTTCCAGTCCTGGCCAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349752.10
CDS-3UTR CCA 90 bp TCTCCAGATACCAATCAGGGAATGACTGGCCAGGACTGGAACTTAACGGCCTTGGAGTCAGGCGCCGCATaGTCCCCTTTGCCGCTTCCT +
Preference number: 4 (lower is better)
Translates to: SPDTNQGMTGQDWNLTALESGAA*SPLPLP
Trigger: AGGAAGCGGCAAAGGGGACCATGCGGCGCCTGACTC...CAAGGCCGTTAAGTTCCAGTCCTGGCCAGTCATTCCCTGATTGGTATCTGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324589.9
ENST00000349752.10
CDS-3UTR CCA 90 bp GCTGCCCAGTTTCCAGTCTGTTCTGGTCCAGGGAAGCACCACCCCATGGCCCTTGATGATGCTAGTGGGTaGAAGGTCCGTGCAATACAC +
Preference number: 4 (lower is better)
Translates to: AAQFPVCSGPGKHHPMALDDASG*KVRAIH
Trigger: GTGTATTGCACGGACCTTCCACCCACTAGCATCATC...AAGGGCCATGGGGTGGTGCTTCCCTGGACCAGAACAGACTGGAAACTGGGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CCA 90 bp TCCTGGCCTAGTGAAAAAGAAGGCTTTTCTTTCTGGCCTCCAGAGACTGCTTCCGTCAGAGTGGTGCCCTaGGCGATGTCAGCGCCCCGA +
Preference number: 4 (lower is better)
Translates to: SWPSEKEGFSFWPPETASVRVVP*AMSAPR
Trigger: TCGGGGCGCTGACATCGCCCAGGGCACCACTCTGAC...GGAAGCAGTCTCTGGAGGCCAGAAAGAAAAGCCTTCTTTTTCACTAGGCCAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CCA 90 bp TCCAGGATGTCTGAGGTGGTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGTTCGAGGAAAGTCAGAGTaGTGCCCTGGGCGATGTCAG +
Preference number: 4 (lower is better)
Translates to: SRMSEVVAGCLLPSFQSVRGKSE*CPGRCQ
Trigger: CTGACATCGCCCAGGGCACCACTCTGACTTTCCTCG...AACAGACTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGACATCCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CCA 90 bp CGCGCCACTTTTTGGCATTCAGATACCGCCGCTCATCAAACTGGTCCCACAGGTCGAGGAAAGTCAGAGTaGTGCCCTGGGCGATGTCAG +
Preference number: 4 (lower is better)
Translates to: RATFWHSDTAAHQTGPTGRGKSE*CPGRCQ
Trigger: CTGACATCGCCCAGGGCACCACTCTGACTTTCCTCG...ACCTGTGGGACCAGTTTGATGAGCGGCGGTATCTGAATGCCAAAAAGTGGCGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424136.5
ENST00000455477.5
CDS-3UTR CCA 90 bp AGGGGTCGTCACCAACGCGCCACTTTTTGGCATTCAGATACCGCCGCTCATCAACTGTGCAACAGAGGCTaGAGCCAGTCCCTGTTCACC +
Preference number: 4 (lower is better)
Translates to: RGRHQRATFWHSDTAAHQLCNRG*SQSLFT
Trigger: GGTGAACAGGGACTGGCTCCAGCCTCTGTTGCACAG...TTGATGAGCGGCGGTATCTGAATGCCAAAAAGTGGCGCGTTGGTGACGACCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424136.5
ENST00000455477.5
CDS-3UTR CCA 90 bp TCCAGGATGTCTGAGGTGGTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGTTCCTCTCCAGGGCGAATaGCCGGGCAGCGTAATAGTA +
Preference number: 4 (lower is better)
Translates to: SRMSEVVAGCLLPSFQSVPLQGE*PGSVIV
Trigger: TACTATTACGCTGCCCGGCCATTCGCCCTGGAGAGG...AACAGACTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGACATCCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CCA 90 bp GGATGTCTGAGGTGGTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGTTCTGGAGGCACAGCTCCTCCTaGAGGATCTGCTGGGTGTAT +
Preference number: 4 (lower is better)
Translates to: GCLRWLQAACCPVSSLFWRHSSS*RICWVY
Trigger: ATACACCCAGCAGATCCTCCAGGAGGAGCTGTGCCT...CCAGAACAGACTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGACATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CCA 90 bp GTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGTTCTGGTCCAGGGAAGCACCACCATGTCCCAGTGCTaGCTCATGAGTGAGGACTCA +
Preference number: 4 (lower is better)
Translates to: VAGCLLPSFQSVLVQGSTTMSQC*LMSEDS
Trigger: TGAGTCCTCACTCATGAGCCAGCACTGGGACATGGT...GGTGCTTCCCTGGACCAGAACAGACTGGAAACTGGGCAGCAAGCAGCCTGCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CCA 90 bp TCTGAGGTGGTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGTTCTGGTCCAGGTTTCCAGTCTGTTCTaGTCCAGGGAAGCACCACCC +
Preference number: 4 (lower is better)
Translates to: SEVVAGCLLPSFQSVLVQVSSLF*SREAPP
Trigger: GGGTGGTGCTTCCCTGGACCAGAACAGACTGGAAAC...CTGGACCAGAACAGACTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CCA 90 bp GGTCGTCACCAACGCGCCACTTTTTGGCATTCAGATACCGCCGCTCATCAAACTCGCCGCTCATCAAACTaGTCCCACAGGTCGTCCCAG +
Preference number: 4 (lower is better)
Translates to: GRHQRATFWHSDTAAHQTRRSSN*SHRSSQ
Trigger: CTGGGACGACCTGTGGGACCAGTTTGATGAGCGGCG...AGTTTGATGAGCGGCGGTATCTGAATGCCAAAAAGTGGCGCGTTGGTGACGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424136.5
ENST00000455477.5
CDS-3UTR CCA 90 bp TCCGGGATGGCCCGATTGCTGGAGATCCGCTCACTCTCCCGCTGGTTGAAAGCACGCTCACTCTCCCGCTaGTTGAAAGCATACAGCTTA +
Preference number: 4 (lower is better)
Translates to: SGMARLLEIRSLSRWLKARSLSR*LKAYSL
Trigger: TAAGCTGTATGCTTTCAACCAGCGGGAGAGTGAGCG...TGCTTTCAACCAGCGGGAGAGTGAGCGGATCTCCAGCAATCGGGCCATCCCGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424136.5
ENST00000455477.5
CDS-3UTR CCA 90 bp CTTTTTGGCATTCAGATACCGCCGCTCATCAAACTGGTCCCACAGGTCGTCCCAGGATGGCCCGATTGCTaGAGATCCGCTCACTCTCCC +
Preference number: 4 (lower is better)
Translates to: LFGIQIPPLIKLVPQVVPGWPDC*RSAHSP
Trigger: GGGAGAGTGAGCGGATCTCCAGCAATCGGGCCATCC...TGGGACGACCTGTGGGACCAGTTTGATGAGCGGCGGTATCTGAATGCCAAAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424136.5
ENST00000455477.5
CDS-3UTR TCA 90 bp CCTGGCCTAGTGAAAAAGAAGGCTTTTCTTTCTGGCCTCCAGAGACTGCTTCCTGGTGATACAGGCACCTaGGGCGCCCAAGGGCTCATC +
Preference number: 4 (lower is better)
Translates to: PGLVKKKAFLSGLQRLLPGDTGT*GAQGLI
Trigger: GATGAGCCCTTGGGCGCCTCAGGTGCCTGTATCACC...AGGAAGCAGTCTCTGGAGGCCAGAAAGAAAAGCCTTCTTTTTCACTAGGCCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324589.9
ENST00000406653.5
CDS-3UTR TCA 90 bp CTCAGATGGCGAGTGTCCGGGATGGCCCGATTGCTGGAGATCCGCTCACTCTCCAGTCATCCACTAATATaGTTTCCCGGATCAGATGCG +
Preference number: 4 (lower is better)
Translates to: LRWRVSGMARLLEIRSLSSHPLI*FPGSDA
Trigger: CGCATCTGATCCGGGAAATCATATTAGTGGATGACT...GGAGAGTGAGCGGATCTCCAGCAATCGGGCCATCCCGGACACTCGCCATCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424136.5
ENST00000455477.5
CDS-3UTR TCA 90 bp AGGATGTCTGAGGTGGTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGTTCTGGCGTGTAGTCCTCTTTaGCCCTGTGCAACAGAGGCT +
Preference number: 4 (lower is better)
Translates to: RMSEVVAGCLLPSFQSVLACSPL*PCATEA
Trigger: AGCCTCTGTTGCACAGGGTCAAAGAGGACTACACGC...CAGAACAGACTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGACATCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR TCA 90 bp AGGATGTCTGAGGTGGTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGTTCTGTCTCCAGGTACCACTTaGAGCTCTGGCAGCGCAGAT +
Preference number: 4 (lower is better)
Translates to: RMSEVVAGCLLPSFQSVLSPGTT*SSGSAD
Trigger: ATCTGCGCTGCCAGAGCTTCAAGTGGTACCTGGAGA...CAGAACAGACTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGACATCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR TCA 90 bp TCCAGGATGTCTGAGGTGGTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGTTTTGCATCTTCGCCTTTaGCCTTGGCACAGGGGCTCA +
Preference number: 4 (lower is better)
Translates to: SRMSEVVAGCLLPSFQSVLHLRL*PWHRGS
Trigger: TGAGCCCCTGTGCCAAGGTCAAAGGCGAAGATGCAA...AACAGACTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGACATCCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR TCA 90 bp TCCAGGATGTCTGAGGTGGTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGTTGAACAAGGTGATGACTaGCAGGCACAGCTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: SRMSEVVAGCLLPSFQSVEQGDD*QAQLLL
Trigger: CAGGAGGAGCTGTGCCTGTCAGTCATCACCTTGTTC...AACAGACTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGACATCCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR TCA 90 bp TCCAGGATGTCTGAGGTGGTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGTTTTCCTCTGTCCTCCCTaGGACAGTTGCTCCTGTCCT +
Preference number: 4 (lower is better)
Translates to: SRMSEVVAGCLLPSFQSVFLCPP*DSCSCP
Trigger: AGGACAGGAGCAACTGTCTCAGGGAGGACAGAGGAA...AACAGACTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGACATCCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR TCA 90 bp GTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGTTCTGGTCCAGGGAAGCACCATACCAATCAGGGAATaGCTGGCCAGGACTGGAACT +
Preference number: 4 (lower is better)
Translates to: VAGCLLPSFQSVLVQGSTIPIRE*LARTGT
Trigger: AGTTCCAGTCCTGGCCAGTCATTCCCTGATTGGTAT...GGTGCTTCCCTGGACCAGAACAGACTGGAAACTGGGCAGCAAGCAGCCTGCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR TCA 90 bp TCCCAGTCCAGGATGTCTGAGGTGGTTGCAGGCTGCTTGCTGCCCAGTTTCCAGATACCAATCAGGGAATaGCTGGCCAGGACTGGAACT +
Preference number: 4 (lower is better)
Translates to: SQSRMSEVVAGCLLPSFQIPIRE*LARTGT
Trigger: AGTTCCAGTCCTGGCCAGTCATTCCCTGATTGGTAT...CTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGACATCCTGGACTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR TCA 90 bp GGAAGGTCCGTGCAATACACCAGCAGTGTGCATCTCAGATGGCGAGTGTCCGGGCACTCTCCCGCTGGTTaGAAGCATACAGCTTATAGG +
Preference number: 4 (lower is better)
Translates to: GRSVQYTSSVHLRWRVSGHSPAG*KHTAYR
Trigger: CCTATAAGCTGTATGCTTTCAACCAGCGGGAGAGTG...CCCGGACACTCGCCATCTGAGATGCACACTGCTGGTGTATTGCACGGACCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424136.5
ENST00000455477.5
CDS-3UTR GCA 90 bp TACCGCCGCTCATCAAACTGGTCCCACAGGTCGTCCCAGTCAGCGTCCGAAGGCCTTGCCGTTCATTATTaGGCAAGCATTTCACCTTGG +
Preference number: 4 (lower is better)
Translates to: YRRSSNWSHRSSQSASEGLAVHY*ASISPW
Trigger: CCAAGGTGAAATGCTTGCGCAATAATGAACGGCAAG...GCCTTCGGACGCTGACTGGGACGACCTGTGGGACCAGTTTGATGAGCGGCGGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424136.5
CDS-3UTR GCA 90 bp ATGACTGGCCAGGACTGGAACTTAACGGCCTTGAGAACATGTGGGATTTGTCTTAGGCGCCGAGCCTTCTaGTCTGGGGAGAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: MTGQDWNLTALRTCGICLRRRAF*SGESCS
Trigger: GGAGCAGCTCTCCCCAGAGCAGAAGGCTCGGCGCCT...AAGACAAATCCCACATGTTCTCAAGGCCGTTAAGTTCCAGTCCTGGCCAGTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR GCA 90 bp GTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGTTCTGGTCCAGGGAAGCACCAGGTGGGATGCTATGTaGTCGATGTGGGAACCAGTT +
Preference number: 4 (lower is better)
Translates to: VAGCLLPSFQSVLVQGSTRWDAM*SMWEPV
Trigger: AACTGGTTCCCACATCGAGCACATAGCATCCCACCT...GGTGCTTCCCTGGACCAGAACAGACTGGAAACTGGGCAGCAAGCAGCCTGCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR GCA 90 bp TCTGAGGTGGTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGTTCTGGTCCAGCCTTGCCGTTCTCGGTaGCATCACCGAACATATCTG +
Preference number: 4 (lower is better)
Translates to: SEVVAGCLLPSFQSVLVQPCRSR*HHRTYL
Trigger: CAGATATGTTCGGTGATGGCACCGAGAACGGCAAGG...CTGGACCAGAACAGACTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CCA 90 bp TCTGAGGTGGTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGTTCTGGTCCAGGTGAAGGCCCATACCTaGGACTTTGCATCTTCGCCT +
Preference number: 4 (lower is better)
Translates to: SEVVAGCLLPSFQSVLVQVKAHT*DFASSP
Trigger: AGGCGAAGATGCAAAGTCCCAGGTATGGGCCTTCAC...CTGGACCAGAACAGACTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CCA 90 bp AGTCCAGGATGTCTGAGGTGGTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGGTGAAGGCCCATACCTaGGACTTTGCATCTTCGCCT +
Preference number: 4 (lower is better)
Translates to: SPGCLRWLQAACCPVSSLVKAHT*DFASSP
Trigger: AGGCGAAGATGCAAAGTCCCAGGTATGGGCCTTCAC...CAGACTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGACATCCTGGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CCA 90 bp TGCTGCCCAGTTTCCAGTCTGTTCTGGTCCAGGGAAGCACCACCCCATGGCCCTGCTATGTGCTCGATGTaGGAACCAGTTTTGGTCCAT +
Preference number: 4 (lower is better)
Translates to: CCPVSSLFWSREAPPHGPAMCSM*EPVLVH
Trigger: ATGGACCAAAACTGGTTCCCACATCGAGCACATAGC...AGGGCCATGGGGTGGTGCTTCCCTGGACCAGAACAGACTGGAAACTGGGCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CCA 90 bp AGTCCAGGATGTCTGAGGTGGTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGGTATCGAGGCAGAGGTaGGATGCTATGTGCTCGATG +
Preference number: 4 (lower is better)
Translates to: SPGCLRWLQAACCPVSSLVSRQR*DAMCSM
Trigger: CATCGAGCACATAGCATCCCACCTCTGCCTCGATAC...CAGACTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGACATCCTGGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CCA 90 bp CAATCAGGGAATGACTGGCCAGGACTGGAACTTAACGGCCTTGAGAACATGTGGGGCCCTTGCTGCTTCTaGCAGGGGTCCTCAAGAGCT +
Preference number: 4 (lower is better)
Translates to: QSGNDWPGLELNGLENMWGPCCF*QGSSRA
Trigger: AGCTCTTGAGGACCCCTGCCAGAAGCAGCAAGGGCC...CCACATGTTCTCAAGGCCGTTAAGTTCCAGTCCTGGCCAGTCATTCCCTGATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CCA 90 bp GTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGTTCTGGTCCAGGGAAGCACCATGACTGGCCAGGACTaGAACTTAACGGCCTTGAGA +
Preference number: 4 (lower is better)
Translates to: VAGCLLPSFQSVLVQGSTMTGQD*NLTALR
Trigger: TCTCAAGGCCGTTAAGTTCCAGTCCTGGCCAGTCAT...GGTGCTTCCCTGGACCAGAACAGACTGGAAACTGGGCAGCAAGCAGCCTGCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CCA 90 bp TCCCAGTCCAGGATGTCTGAGGTGGTTGCAGGCTGCTTGCTGCCCAGTTTCCAGGAAGGCTTTTCTTTCTaGCCTCCAGAGACTGCTTCC +
Preference number: 4 (lower is better)
Translates to: SQSRMSEVVAGCLLPSFQEGFSF*PPETAS
Trigger: GGAAGCAGTCTCTGGAGGCCAGAAAGAAAAGCCTTC...CTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGACATCCTGGACTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CCA 90 bp TCCCAGTCCAGGATGTCTGAGGTGGTTGCAGGCTGCTTGCTGCCCAGTTTCCAGCGCTCACTCTCCCGCTaGTTGAAAGCATACAGCTTA +
Preference number: 4 (lower is better)
Translates to: SQSRMSEVVAGCLLPSFQRSLSR*LKAYSL
Trigger: TAAGCTGTATGCTTTCAACCAGCGGGAGAGTGAGCG...CTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGACATCCTGGACTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CCA 90 bp GACTGGCCAGGACTGGAACTTAACGGCCTTGAGAACATGTGGGATTTGTCTTTGGGCGAGTGTCCGGGATaGCCCGATTGCTGGAGATCC +
Preference number: 4 (lower is better)
Translates to: DWPGLELNGLENMWDLSLGECPG*PDCWRS
Trigger: GGATCTCCAGCAATCGGGCCATCCCGGACACTCGCC...CAAAGACAAATCCCACATGTTCTCAAGGCCGTTAAGTTCCAGTCCTGGCCAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CCA 90 bp AGATACCAATCAGGGAATGACTGGCCAGGACTGGAACTTAACGGCCTTGAGAACGGCGAGTGTCCGGGATaGCCCGATTGCTGGAGATCC +
Preference number: 4 (lower is better)
Translates to: RYQSGNDWPGLELNGLENGECPG*PDCWRS
Trigger: GGATCTCCAGCAATCGGGCCATCCCGGACACTCGCC...GTTCTCAAGGCCGTTAAGTTCCAGTCCTGGCCAGTCATTCCCTGATTGGTATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CCA 90 bp TATAGGGGTCGTCACCAACGCGCCACTTTTTGGCATTCAGATACCGCCGCTCATAGTGTGCATCTCAGATaGCGAGTGTCCGGGATGGCC +
Preference number: 4 (lower is better)
Translates to: YRGRHQRATFWHSDTAAHSVHLR*RVSGMA
Trigger: GGCCATCCCGGACACTCGCCATCTGAGATGCACACT...ATGAGCGGCGGTATCTGAATGCCAAAAAGTGGCGCGTTGGTGACGACCCCTATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424136.5
ENST00000455477.5
CDS-3UTR TCA 90 bp ATGACTGGCCAGGACTGGAACTTAACGGCCTTGAGAACATGTGGGATTTGTCTTGTAGGGAGGAGTGGGTaGTACAGGCACCTGAGGCGC +
Preference number: 4 (lower is better)
Translates to: MTGQDWNLTALRTCGICLVGRSG*YRHLRR
Trigger: GCGCCTCAGGTGCCTGTATCACCCACTCCTCCCTAC...AAGACAAATCCCACATGTTCTCAAGGCCGTTAAGTTCCAGTCCTGGCCAGTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324589.9
ENST00000406653.5
CDS-3UTR TCA 90 bp AGTCCAGGATGTCTGAGGTGGTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGCCAGCAGTGTGCATCTaGCTTGAAGAAAGACCTGAG +
Preference number: 4 (lower is better)
Translates to: SPGCLRWLQAACCPVSSLPAVCI*LEERPE
Trigger: CTCAGGTCTTTCTTCAAGTCAGATGCACACTGCTGG...CAGACTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGACATCCTGGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324589.9
CDS-3UTR TCA 90 bp GGATGTCTGAGGTGGTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGTTCTGGCACTCTCCCGCTGGTTaGAAGCATACAGCTTATAGG +
Preference number: 4 (lower is better)
Translates to: GCLRWLQAACCPVSSLFWHSPAG*KHTAYR
Trigger: CCTATAAGCTGTATGCTTTCAACCAGCGGGAGAGTG...CCAGAACAGACTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGACATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349752.10
ENST00000406653.5
CDS-3UTR GCA 90 bp ATGATTTCCCGGATCAGATGCGTAGGGGTGCGGTTTAATACACTGCGGATGGTCCAAACCTTAGGGGTCTaGACTTCAGGTCCCGTCGGC +
Preference number: 4 (lower is better)
Translates to: MISRIRCVGVRFNTLRMVQTLGV*TSGPVG
Trigger: GCCGACGGGACCTGAAGTGCAGACCCCTAAGGTTTG...GACCATCCGCAGTGTATTAAACCGCACCCCTACGCATCTGATCCGGGAAATCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455477.5
CDS-3UTR GCA 90 bp TGCTGCCCAGTTTCCAGTCTGTTCTGGTCCAGGGAAGCACCACCCCATGGCCCTCTTGCCGTTCATTATTaGGCAAGCATTTCACCTTGG +
Preference number: 4 (lower is better)
Translates to: CCPVSSLFWSREAPPHGPLAVHY*ASISPW
Trigger: CCAAGGTGAAATGCTTGCGCAATAATGAACGGCAAG...AGGGCCATGGGGTGGTGCTTCCCTGGACCAGAACAGACTGGAAACTGGGCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR GCA 90 bp TCCAGGATGTCTGAGGTGGTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGTTGACCGGACCAGACCTTaGCGTTCATTATTGCGCAAG +
Preference number: 4 (lower is better)
Translates to: SRMSEVVAGCLLPSFQSVDRTRP*RSLLRK
Trigger: CTTGCGCAATAATGAACGGCAAGGTCTGGTCCGGTC...AACAGACTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGACATCCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR GCA 90 bp CGCGCCACTTTTTGGCATTCAGATACCGCCGCTCATCAAACTGGTCCCACAGGTGACCGGACCAGACCTTaGCGTTCATTATTGCGCAAG +
Preference number: 4 (lower is better)
Translates to: RATFWHSDTAAHQTGPTGDRTRP*RSLLRK
Trigger: CTTGCGCAATAATGAACGGCAAGGTCTGGTCCGGTC...ACCTGTGGGACCAGTTTGATGAGCGGCGGTATCTGAATGCCAAAAAGTGGCGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424136.5
ENST00000455477.5
CDS-3UTR GCA 90 bp TCCTGGCCTAGTGAAAAAGAAGGCTTTTCTTTCTGGCCTCCAGAGACTGCTTCCTGCTCTGGGGAGAGCTaGTCCCACTGGAAGTGGAGG +
Preference number: 4 (lower is better)
Translates to: SWPSEKEGFSFWPPETASCSGES*SHWKWR
Trigger: CCTCCACTTCCAGTGGGAGCAGCTCTCCCCAGAGCA...GGAAGCAGTCTCTGGAGGCCAGAAAGAAAAGCCTTCTTTTTCACTAGGCCAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR GCA 90 bp AGTCCAGGATGTCTGAGGTGGTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGTCCTCAGGTCCAATCTaGTCTCAACATTCCCGAAGG +
Preference number: 4 (lower is better)
Translates to: SPGCLRWLQAACCPVSSLSSGPI*SQHSRR
Trigger: CCTTCGGGAATGTTGAGAGCAGATTGGACCTGAGGA...CAGACTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGACATCCTGGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR GCA 90 bp TCTGAGGTGGTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGTTCTGGTCCAGTCCTCAGGTCCAATCTaGTCTCAACATTCCCGAAGG +
Preference number: 4 (lower is better)
Translates to: SEVVAGCLLPSFQSVLVQSSGPI*SQHSRR
Trigger: CCTTCGGGAATGTTGAGAGCAGATTGGACCTGAGGA...CTGGACCAGAACAGACTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR GCA 90 bp GTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGTTCTGGTCCAGGGAAGCACCCCATACCTGGGACTTTaGATCTTCGCCTTTGACCTT +
Preference number: 4 (lower is better)
Translates to: VAGCLLPSFQSVLVQGSTPYLGL*IFAFDL
Trigger: AAGGTCAAAGGCGAAGATGCAAAGTCCCAGGTATGG...GGTGCTTCCCTGGACCAGAACAGACTGGAAACTGGGCAGCAAGCAGCCTGCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR GCA 90 bp TCTCCAGATACCAATCAGGGAATGACTGGCCAGGACTGGAACTTAACGGCCTTGGAGGTGGTTGCAGGCTaGTTGCTGCCCAGTTTCCAG +
Preference number: 4 (lower is better)
Translates to: SPDTNQGMTGQDWNLTALEVVAG*LLPSFQ
Trigger: CTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTC...CAAGGCCGTTAAGTTCCAGTCCTGGCCAGTCATTCCCTGATTGGTATCTGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CCA 90 bp CCTGGCCTAGTGAAAAAGAAGGCTTTTCTTTCTGGCCTCCAGAGACTGCTTCCTGAGCACCCCGAAGACTaGCAGAACCAGCCGACGAGT +
Preference number: 4 (lower is better)
Translates to: PGLVKKKAFLSGLQRLLPEHPED*QNQPTS
Trigger: ACTCGTCGGCTGGTTCTGCCAGTCTTCGGGGTGCTC...AGGAAGCAGTCTCTGGAGGCCAGAAAGAAAAGCCTTCTTTTTCACTAGGCCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000324589.9
ENST00000349752.10
CDS-3UTR CCA 90 bp CAATCAGGGAATGACTGGCCAGGACTGGAACTTAACGGCCTTGAGAACATGTGGCGAGGAAAGTCAGAGTaGTGCCCTGGGCGATGTCAG +
Preference number: 4 (lower is better)
Translates to: QSGNDWPGLELNGLENMWRGKSE*CPGRCQ
Trigger: CTGACATCGCCCAGGGCACCACTCTGACTTTCCTCG...CCACATGTTCTCAAGGCCGTTAAGTTCCAGTCCTGGCCAGTCATTCCCTGATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CCA 90 bp TCAGAGTGGTGCCCTGGGCGATGTCAGCGCCCCGAATCCGGGACCGGACCAGACTCTTTATATACGTGTTaGCATTTCCATCAGGGAAAA +
Preference number: 4 (lower is better)
Translates to: SEWCPGRCQRPESGTGPDSLYTC*HFHQGK
Trigger: TTTTCCCTGATGGAAATGCCAACACGTATATAAAGA...GTCTGGTCCGGTCCCGGATTCGGGGCGCTGACATCGCCCAGGGCACCACTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455477.5
CDS-3UTR CCA 90 bp TCTCCAGATACCAATCAGGGAATGACTGGCCAGGACTGGAACTTAACGGCCTTGCCTCTCCAGGGCGAATaGCCGGGCAGCGTAATAGTA +
Preference number: 4 (lower is better)
Translates to: SPDTNQGMTGQDWNLTALPLQGE*PGSVIV
Trigger: TACTATTACGCTGCCCGGCCATTCGCCCTGGAGAGG...CAAGGCCGTTAAGTTCCAGTCCTGGCCAGTCATTCCCTGATTGGTATCTGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CCA 90 bp AGTCCAGGATGTCTGAGGTGGTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGTACCACTTGAAGCTCTaGCAGCGCAGATTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: SPGCLRWLQAACCPVSSLYHLKL*QRRFFL
Trigger: GAGGAAGAATCTGCGCTGCCAGAGCTTCAAGTGGTA...CAGACTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGACATCCTGGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CCA 90 bp GGATGTCTGAGGTGGTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGTTCTGGTACCACTTGAAGCTCTaGCAGCGCAGATTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: GCLRWLQAACCPVSSLFWYHLKL*QRRFFL
Trigger: GAGGAAGAATCTGCGCTGCCAGAGCTTCAAGTGGTA...CCAGAACAGACTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGACATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CCA 90 bp AGGATGTCTGAGGTGGTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGTTCTGTATTGCCCTTCTGGATaGAGGACTCCTTGGGGATGC +
Preference number: 4 (lower is better)
Translates to: RMSEVVAGCLLPSFQSVLYCPSG*RTPWGC
Trigger: GCATCCCCAAGGAGTCCTCCATCCAGAAGGGCAATA...CAGAACAGACTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGACATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CCA 90 bp TCCCAGTCCAGGATGTCTGAGGTGGTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTGTGGGAACCAGTTTTaGTCCATTGCTGTCGGTCAT +
Preference number: 4 (lower is better)
Translates to: SQSRMSEVVAGCLLPSFQCGNQF*SIAVGH
Trigger: ATGACCGACAGCAATGGACCAAAACTGGTTCCCACA...CTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGACATCCTGGACTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CCA 90 bp TCCTGGCCTAGTGAAAAAGAAGGCTTTTCTTTCTGGCCTCCAGAGACTGCTTCCGGCCCTTGCTGCTTCTaGCAGGGGTCCTCAAGAGCT +
Preference number: 4 (lower is better)
Translates to: SWPSEKEGFSFWPPETASGPCCF*QGSSRA
Trigger: AGCTCTTGAGGACCCCTGCCAGAAGCAGCAAGGGCC...GGAAGCAGTCTCTGGAGGCCAGAAAGAAAAGCCTTCTTTTTCACTAGGCCAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CCA 90 bp TCCTGGCCTAGTGAAAAAGAAGGCTTTTCTTTCTGGCCTCCAGAGACTGCTTCCGGAAGCACCACCCCATaGCCCTTGCTGCTTCTGGCA +
Preference number: 4 (lower is better)
Translates to: SWPSEKEGFSFWPPETASGSTTP*PLLLLA
Trigger: TGCCAGAAGCAGCAAGGGCCATGGGGTGGTGCTTCC...GGAAGCAGTCTCTGGAGGCCAGAAAGAAAAGCCTTCTTTTTCACTAGGCCAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CCA 90 bp GCTGCCCAGTTTCCAGTCTGTTCTGGTCCAGGGAAGCACCACCCCATGGCCCTTGTCTTTGAGCCCCATTaGCTTGTGATGTTTTCCTCT +
Preference number: 4 (lower is better)
Translates to: AAQFPVCSGPGKHHPMALVFEPH*LVMFSS
Trigger: AGAGGAAAACATCACAAGCCAATGGGGCTCAAAGAC...AAGGGCCATGGGGTGGTGCTTCCCTGGACCAGAACAGACTGGAAACTGGGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CCA 90 bp AGTCCAGGATGTCTGAGGTGGTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGGGCCTTGAGAACATGTaGGATTTGTCTTTGAGCCCC +
Preference number: 4 (lower is better)
Translates to: SPGCLRWLQAACCPVSSLGLENM*DLSLSP
Trigger: GGGGCTCAAAGACAAATCCCACATGTTCTCAAGGCC...CAGACTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGACATCCTGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CCA 90 bp TCTGAGGTGGTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGTTCTGGTCCAGATGACTGGCCAGGACTaGAACTTAACGGCCTTGAGA +
Preference number: 4 (lower is better)
Translates to: SEVVAGCLLPSFQSVLVQMTGQD*NLTALR
Trigger: TCTCAAGGCCGTTAAGTTCCAGTCCTGGCCAGTCAT...CTGGACCAGAACAGACTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CCA 90 bp GTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGTTCTGGTCCAGGGAAGCACCCAATCAGGGAATGACTaGCCAGGACTGGAACTTAAC +
Preference number: 4 (lower is better)
Translates to: VAGCLLPSFQSVLVQGSTQSGND*PGLELN
Trigger: GTTAAGTTCCAGTCCTGGCCAGTCATTCCCTGATTG...GGTGCTTCCCTGGACCAGAACAGACTGGAAACTGGGCAGCAAGCAGCCTGCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CCA 90 bp CCAACGCGCCACTTTTTGGCATTCAGATACCGCCGCTCATCAAACTGGTCCCACCAACGCGCCACTTTTTaGCATTCAGATACCGCCGCT +
Preference number: 4 (lower is better)
Translates to: PTRHFLAFRYRRSSNWSHQRATF*HSDTAA
Trigger: AGCGGCGGTATCTGAATGCCAAAAAGTGGCGCGTTG...GTGGGACCAGTTTGATGAGCGGCGGTATCTGAATGCCAAAAAGTGGCGCGTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000424136.5
ENST00000455477.5
CDS-3UTR CCA 90 bp AGTCCAGGATGTCTGAGGTGGTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGCGCTCACTCTCCCGCTaGTTGAAAGCATACAGCTTA +
Preference number: 4 (lower is better)
Translates to: SPGCLRWLQAACCPVSSLRSLSR*LKAYSL
Trigger: TAAGCTGTATGCTTTCAACCAGCGGGAGAGTGAGCG...CAGACTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGACATCCTGGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CCA 90 bp TCTCCAGATACCAATCAGGGAATGACTGGCCAGGACTGGAACTTAACGGCCTTGAGTGTGCATCTCAGATaGCGAGTGTCCGGGATGGCC +
Preference number: 4 (lower is better)
Translates to: SPDTNQGMTGQDWNLTALSVHLR*RVSGMA
Trigger: GGCCATCCCGGACACTCGCCATCTGAGATGCACACT...CAAGGCCGTTAAGTTCCAGTCCTGGCCAGTCATTCCCTGATTGGTATCTGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CCA 90 bp GGATGTCTGAGGTGGTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGTTCTGGAATTCAGCACCCAGCTaGCAGCCATCAATTGGCCAT +
Preference number: 4 (lower is better)
Translates to: GCLRWLQAACCPVSSLFWNSAPS*QPSIGH
Trigger: ATGGCCAATTGATGGCTGCCAGCTGGGTGCTGAATT...CCAGAACAGACTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGACATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406653.5
3UTR CAA 72 bp CGAATCCGGGACCGGACCAGACCTTGCCGTTCATTATaGCGCAAGCATTTCACCTTGGGCAACTTGATGAGC +
Preference number: 4 (lower is better)
Translates to: RIRDRTRPCRSL*RKHFTLGNLMS
Trigger: GCTCATCAAGTTGCCCAAGGTGAAATGCTTGCGCAATAATGAACGGCAAGGTCTGGTCCGGTCCCGGATTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424136.5
ENST00000455477.5
CDS-3UTR TCA 90 bp AGATACCAATCAGGGAATGACTGGCCAGGACTGGAACTTAACGGCCTTGAGAACAGAACAGCAGCACCGTaGTCCAGAGCACCCCGAAGA +
Preference number: 4 (lower is better)
Translates to: RYQSGNDWPGLELNGLENRTAAP*SRAPRR
Trigger: TCTTCGGGGTGCTCTGGATCACGGTGCTGCTGTTCT...GTTCTCAAGGCCGTTAAGTTCCAGTCCTGGCCAGTCATTCCCTGATTGGTATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324589.9
ENST00000349752.10
CDS-3UTR TCA 90 bp GACTGGCCAGGACTGGAACTTAACGGCCTTGAGAACATGTGGGATTTGTCTTTGCCAGTCCAGGATGTCTaGGGTGGTTGCAGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: DWPGLELNGLENMWDLSLPVQDV*GGCRLL
Trigger: AAGCAGCCTGCAACCACCTCAGACATCCTGGACTGG...CAAAGACAAATCCCACATGTTCTCAAGGCCGTTAAGTTCCAGTCCTGGCCAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR TCA 90 bp GGATGTCTGAGGTGGTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGTTCTGGTGTGGGATTTGTCTTTaGGCCCCATTGGCTTGTGAT +
Preference number: 4 (lower is better)
Translates to: GCLRWLQAACCPVSSLFWCGICL*APLACD
Trigger: ATCACAAGCCAATGGGGCTCAAAGACAAATCCCACA...CCAGAACAGACTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGACATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR GCA 90 bp AGATACCAATCAGGGAATGACTGGCCAGGACTGGAACTTAACGGCCTTGAGAACCAAACCTTAGGGGTCTaGACTTCAGGTCCCGTCGGC +
Preference number: 4 (lower is better)
Translates to: RYQSGNDWPGLELNGLENQTLGV*TSGPVG
Trigger: GCCGACGGGACCTGAAGTGCAGACCCCTAAGGTTTG...GTTCTCAAGGCCGTTAAGTTCCAGTCCTGGCCAGTCATTCCCTGATTGGTATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324589.9
CDS-3UTR GCA 90 bp GGATGTCTGAGGTGGTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGTTCTGGATTTCCCGGATCAGATaGGTAGGGGTGCGGTTTAAT +
Preference number: 4 (lower is better)
Translates to: GCLRWLQAACCPVSSLFWISRIR*VGVRFN
Trigger: ATTAAACCGCACCCCTACGCATCTGATCCGGGAAAT...CCAGAACAGACTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGACATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR GCA 90 bp TCTCCAGATACCAATCAGGGAATGACTGGCCAGGACTGGAACTTAACGGCCTTGTCCTCTTTGACCCTGTaGAACAGAGGCTGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: SPDTNQGMTGQDWNLTALSSLTL*NRGWSQ
Trigger: CTGGCTCCAGCCTCTGTTGCACAGGGTCAAAGAGGA...CAAGGCCGTTAAGTTCCAGTCCTGGCCAGTCATTCCCTGATTGGTATCTGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR GCA 90 bp AGGATGTCTGAGGTGGTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGTTCTGGTCTCTGTCGGATATTaGCCTTCTGGATGGAGGACT +
Preference number: 4 (lower is better)
Translates to: RMSEVVAGCLLPSFQSVLVSVGY*PSGWRT
Trigger: AGTCCTCCATCCAGAAGGGCAATATCCGACAGAGAC...CAGAACAGACTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGACATCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR GCA 90 bp AGTCCAGGATGTCTGAGGTGGTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGCCATACCTGGGACTTTaGATCTTCGCCTTTGACCTT +
Preference number: 4 (lower is better)
Translates to: SPGCLRWLQAACCPVSSLPYLGL*IFAFDL
Trigger: AAGGTCAAAGGCGAAGATGCAAAGTCCCAGGTATGG...CAGACTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGACATCCTGGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR GCA 90 bp CAATCAGGGAATGACTGGCCAGGACTGGAACTTAACGGCCTTGAGAACATGTGGTCCTCCTGGAGGATCTaGTGGGTGTATGTGAAGGCC +
Preference number: 4 (lower is better)
Translates to: QSGNDWPGLELNGLENMWSSWRI*WVYVKA
Trigger: GGCCTTCACATACACCCAGCAGATCCTCCAGGAGGA...CCACATGTTCTCAAGGCCGTTAAGTTCCAGTCCTGGCCAGTCATTCCCTGATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR GCA 90 bp TCTGAGGTGGTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGTTCTGGTCCAGCCAGTTTTGGTCCATTaGTGTCGGTCATCTCCATTC +
Preference number: 4 (lower is better)
Translates to: SEVVAGCLLPSFQSVLVQPVLVH*CRSSPF
Trigger: GAATGGAGATGACCGACAGCAATGGACCAAAACTGG...CTGGACCAGAACAGACTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR GCA 90 bp CAATCAGGGAATGACTGGCCAGGACTGGAACTTAACGGCCTTGAGAACATGTGGGAGGCAGAGGTGGGATaGTATGTGCTCGATGTGGGA +
Preference number: 4 (lower is better)
Translates to: QSGNDWPGLELNGLENMWEAEVG*YVLDVG
Trigger: TCCCACATCGAGCACATAGCATCCCACCTCTGCCTC...CCACATGTTCTCAAGGCCGTTAAGTTCCAGTCCTGGCCAGTCATTCCCTGATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR GCA 90 bp AGATACCAATCAGGGAATGACTGGCCAGGACTGGAACTTAACGGCCTTGAGAACGAGGTGGTTGCAGGCTaGTTGCTGCCCAGTTTCCAG +
Preference number: 4 (lower is better)
Translates to: RYQSGNDWPGLELNGLENEVVAG*LLPSFQ
Trigger: CTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTC...GTTCTCAAGGCCGTTAAGTTCCAGTCCTGGCCAGTCATTCCCTGATTGGTATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR GCA 90 bp AGTCCAGGATGTCTGAGGTGGTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGAATACACCAGCAGTGTaGATCTCAGATGGCGAGTGT +
Preference number: 4 (lower is better)
Translates to: SPGCLRWLQAACCPVSSLNTPAV*ISDGEC
Trigger: ACACTCGCCATCTGAGATGCACACTGCTGGTGTATT...CAGACTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGACATCCTGGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CCA 90 bp GACTGGCCAGGACTGGAACTTAACGGCCTTGAGAACATGTGGGATTTGTCTTTGCTGTGCAACAGAGGCTaGAGCCAGTCCCTGTTCACC +
Preference number: 4 (lower is better)
Translates to: DWPGLELNGLENMWDLSLLCNRG*SQSLFT
Trigger: GGTGAACAGGGACTGGCTCCAGCCTCTGTTGCACAG...CAAAGACAAATCCCACATGTTCTCAAGGCCGTTAAGTTCCAGTCCTGGCCAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CCA 90 bp CCTGGCCTAGTGAAAAAGAAGGCTTTTCTTTCTGGCCTCCAGAGACTGCTTCCTCTGTGCAACAGAGGCTaGAGCCAGTCCCTGTTCACC +
Preference number: 4 (lower is better)
Translates to: PGLVKKKAFLSGLQRLLPLCNRG*SQSLFT
Trigger: GGTGAACAGGGACTGGCTCCAGCCTCTGTTGCACAG...AGGAAGCAGTCTCTGGAGGCCAGAAAGAAAAGCCTTCTTTTTCACTAGGCCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CCA 90 bp GACTGGCCAGGACTGGAACTTAACGGCCTTGAGAACATGTGGGATTTGTCTTTGCCTCTCCAGGGCGAATaGCCGGGCAGCGTAATAGTA +
Preference number: 4 (lower is better)
Translates to: DWPGLELNGLENMWDLSLPLQGE*PGSVIV
Trigger: TACTATTACGCTGCCCGGCCATTCGCCCTGGAGAGG...CAAAGACAAATCCCACATGTTCTCAAGGCCGTTAAGTTCCAGTCCTGGCCAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CCA 90 bp TCTCCAGATACCAATCAGGGAATGACTGGCCAGGACTGGAACTTAACGGCCTTGCGGATATTGCCCTTCTaGATGGAGGACTCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: SPDTNQGMTGQDWNLTALRILPF*MEDSLG
Trigger: CCCCAAGGAGTCCTCCATCCAGAAGGGCAATATCCG...CAAGGCCGTTAAGTTCCAGTCCTGGCCAGTCATTCCCTGATTGGTATCTGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CCA 90 bp GGATGTCTGAGGTGGTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGTTCTGGCAATCAGGGAATGACTaGCCAGGACTGGAACTTAAC +
Preference number: 4 (lower is better)
Translates to: GCLRWLQAACCPVSSLFWQSGND*PGLELN
Trigger: GTTAAGTTCCAGTCCTGGCCAGTCATTCCCTGATTG...CCAGAACAGACTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGACATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CCA 90 bp CGTCCGAAGGCTAACAGACTCCATCTTGCTTCTAACTTCCAAGCTGTCTTTGTTGGCGAGTGTCCGGGATaGCCCGATTGCTGGAGATCC +
Preference number: 4 (lower is better)
Translates to: RPKANRLHLASNFQAVFVGECPG*PDCWRS
Trigger: GGATCTCCAGCAATCGGGCCATCCCGGACACTCGCC...AACAAAGACAGCTTGGAAGTTAGAAGCAAGATGGAGTCTGTTAGCCTTCGGACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424136.5
CDS-3UTR TCA 90 bp TCCTGGCCTAGTGAAAAAGAAGGCTTTTCTTTCTGGCCTCCAGAGACTGCTTCCTTGCATCTTCGCCTTTaGCCTTGGCACAGGGGCTCA +
Preference number: 4 (lower is better)
Translates to: SWPSEKEGFSFWPPETASLHLRL*PWHRGS
Trigger: TGAGCCCCTGTGCCAAGGTCAAAGGCGAAGATGCAA...GGAAGCAGTCTCTGGAGGCCAGAAAGAAAAGCCTTCTTTTTCACTAGGCCAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR TCA 90 bp AGATACCAATCAGGGAATGACTGGCCAGGACTGGAACTTAACGGCCTTGAGAACTTCCTCTGTCCTCCCTaGGACAGTTGCTCCTGTCCT +
Preference number: 4 (lower is better)
Translates to: RYQSGNDWPGLELNGLENFLCPP*DSCSCP
Trigger: AGGACAGGAGCAACTGTCTCAGGGAGGACAGAGGAA...GTTCTCAAGGCCGTTAAGTTCCAGTCCTGGCCAGTCATTCCCTGATTGGTATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR TCA 90 bp TCCAGGATGTCTGAGGTGGTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGTTTGTGGGATTTGTCTTTaGGCCCCATTGGCTTGTGAT +
Preference number: 4 (lower is better)
Translates to: SRMSEVVAGCLLPSFQSVCGICL*APLACD
Trigger: ATCACAAGCCAATGGGGCTCAAAGACAAATCCCACA...AACAGACTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGACATCCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR TCA 90 bp GACCGGACCAGACCTTGCCGTTCATTATTGCGCAAGCATTTCACCTTGGGCAACCACTCTCCCGCTGGTTaGAAGCATACAGCTTATAGG +
Preference number: 4 (lower is better)
Translates to: DRTRPCRSLLRKHFTLGNHSPAG*KHTAYR
Trigger: CCTATAAGCTGTATGCTTTCAACCAGCGGGAGAGTG...GTTGCCCAAGGTGAAATGCTTGCGCAATAATGAACGGCAAGGTCTGGTCCGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424136.5
ENST00000455477.5
CDS-3UTR GCA 90 bp TCTCCAGATACCAATCAGGGAATGACTGGCCAGGACTGGAACTTAACGGCCTTGGACCGGACCAGACCTTaGCGTTCATTATTGCGCAAG +
Preference number: 4 (lower is better)
Translates to: SPDTNQGMTGQDWNLTALDRTRP*RSLLRK
Trigger: CTTGCGCAATAATGAACGGCAAGGTCTGGTCCGGTC...CAAGGCCGTTAAGTTCCAGTCCTGGCCAGTCATTCCCTGATTGGTATCTGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR GCA 90 bp CTTTTTGGCATTCAGATACCGCCGCTCATCAAACTGGTCCCACAGGTCGTCCCATCCTCAGGTCCAATCTaGTCTCAACATTCCCGAAGG +
Preference number: 4 (lower is better)
Translates to: LFGIQIPPLIKLVPQVVPSSGPI*SQHSRR
Trigger: CCTTCGGGAATGTTGAGAGCAGATTGGACCTGAGGA...TGGGACGACCTGTGGGACCAGTTTGATGAGCGGCGGTATCTGAATGCCAAAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455477.5
CDS-3UTR GCA 90 bp CCTGGCCTAGTGAAAAAGAAGGCTTTTCTTTCTGGCCTCCAGAGACTGCTTCCTGAGGCAGAGGTGGGATaGTATGTGCTCGATGTGGGA +
Preference number: 4 (lower is better)
Translates to: PGLVKKKAFLSGLQRLLPEAEVG*YVLDVG
Trigger: TCCCACATCGAGCACATAGCATCCCACCTCTGCCTC...AGGAAGCAGTCTCTGGAGGCCAGAAAGAAAAGCCTTCTTTTTCACTAGGCCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR GCA 90 bp TCTCCAGATACCAATCAGGGAATGACTGGCCAGGACTGGAACTTAACGGCCTTGCCTTGCCGTTCTCGGTaGCATCACCGAACATATCTG +
Preference number: 4 (lower is better)
Translates to: SPDTNQGMTGQDWNLTALPCRSR*HHRTYL
Trigger: CAGATATGTTCGGTGATGGCACCGAGAACGGCAAGG...CAAGGCCGTTAAGTTCCAGTCCTGGCCAGTCATTCCCTGATTGGTATCTGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR GCA 90 bp TCCTGGCCTAGTGAAAAAGAAGGCTTTTCTTTCTGGCCTCCAGAGACTGCTTCCTGGTTGCAGGCTGCTTaGTGCCCAGTTTCCAGTCTG +
Preference number: 4 (lower is better)
Translates to: SWPSEKEGFSFWPPETASWLQAA*CPVSSL
Trigger: CAGACTGGAAACTGGGCAGCAAGCAGCCTGCAACCA...GGAAGCAGTCTCTGGAGGCCAGAAAGAAAAGCCTTCTTTTTCACTAGGCCAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CCA 90 bp TCCAGGATGTCTGAGGTGGTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGTTCCTCCAACTTCCTCTTaGTTACCCAGAAGAACAGCA +
Preference number: 4 (lower is better)
Translates to: SRMSEVVAGCLLPSFQSVPPTSS*LPRRTA
Trigger: TGCTGTTCTTCTGGGTAACCAAGAGGAAGTTGGAGG...AACAGACTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGACATCCTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324589.9
ENST00000349752.10
CDS-3UTR CCA 90 bp TCCTGGCCTAGTGAAAAAGAAGGCTTTTCTTTCTGGCCTCCAGAGACTGCTTCCCGGATATTGCCCTTCTaGATGGAGGACTCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: SWPSEKEGFSFWPPETASRILPF*MEDSLG
Trigger: CCCCAAGGAGTCCTCCATCCAGAAGGGCAATATCCG...GGAAGCAGTCTCTGGAGGCCAGAAAGAAAAGCCTTCTTTTTCACTAGGCCAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CCA 90 bp AGATACCAATCAGGGAATGACTGGCCAGGACTGGAACTTAACGGCCTTGAGAACAGGCACAGCTCCTCCTaGAGGATCTGCTGGGTGTAT +
Preference number: 4 (lower is better)
Translates to: RYQSGNDWPGLELNGLENRHSSS*RICWVY
Trigger: ATACACCCAGCAGATCCTCCAGGAGGAGCTGTGCCT...GTTCTCAAGGCCGTTAAGTTCCAGTCCTGGCCAGTCATTCCCTGATTGGTATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CCA 90 bp GACTGGCCAGGACTGGAACTTAACGGCCTTGAGAACATGTGGGATTTGTCTTTGAGGCACAGCTCCTCCTaGAGGATCTGCTGGGTGTAT +
Preference number: 4 (lower is better)
Translates to: DWPGLELNGLENMWDLSLRHSSS*RICWVY
Trigger: ATACACCCAGCAGATCCTCCAGGAGGAGCTGTGCCT...CAAAGACAAATCCCACATGTTCTCAAGGCCGTTAAGTTCCAGTCCTGGCCAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CCA 90 bp AGATACCAATCAGGGAATGACTGGCCAGGACTGGAACTTAACGGCCTTGAGAACAAGGACAAGAACCACTaGGGCGCCAGGGAACAAGGT +
Preference number: 4 (lower is better)
Translates to: RYQSGNDWPGLELNGLENKDKNH*GAREQG
Trigger: ACCTTGTTCCCTGGCGCCCCAGTGGTTCTTGTCCTT...GTTCTCAAGGCCGTTAAGTTCCAGTCCTGGCCAGTCATTCCCTGATTGGTATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CCA 90 bp TCCTGGCCTAGTGAAAAAGAAGGCTTTTCTTTCTGGCCTCCAGAGACTGCTTCCAAGGACAAGAACCACTaGGGCGCCAGGGAACAAGGT +
Preference number: 4 (lower is better)
Translates to: SWPSEKEGFSFWPPETASKDKNH*GAREQG
Trigger: ACCTTGTTCCCTGGCGCCCCAGTGGTTCTTGTCCTT...GGAAGCAGTCTCTGGAGGCCAGAAAGAAAAGCCTTCTTTTTCACTAGGCCAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CCA 90 bp CCTGGCCTAGTGAAAAAGAAGGCTTTTCTTTCTGGCCTCCAGAGACTGCTTCCTAAGGACAAGAACCACTaGGGCGCCAGGGAACAAGGT +
Preference number: 4 (lower is better)
Translates to: PGLVKKKAFLSGLQRLLPKDKNH*GAREQG
Trigger: ACCTTGTTCCCTGGCGCCCCAGTGGTTCTTGTCCTT...AGGAAGCAGTCTCTGGAGGCCAGAAAGAAAAGCCTTCTTTTTCACTAGGCCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CCA 90 bp TCTCCAGATACCAATCAGGGAATGACTGGCCAGGACTGGAACTTAACGGCCTTGGTATCGAGGCAGAGGTaGGATGCTATGTGCTCGATG +
Preference number: 4 (lower is better)
Translates to: SPDTNQGMTGQDWNLTALVSRQR*DAMCSM
Trigger: CATCGAGCACATAGCATCCCACCTCTGCCTCGATAC...CAAGGCCGTTAAGTTCCAGTCCTGGCCAGTCATTCCCTGATTGGTATCTGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CCA 90 bp CCTGGCCTAGTGAAAAAGAAGGCTTTTCTTTCTGGCCTCCAGAGACTGCTTCCTGTTTCCAGTCTGTTCTaGTCCAGGGAAGCACCACCC +
Preference number: 4 (lower is better)
Translates to: PGLVKKKAFLSGLQRLLPVSSLF*SREAPP
Trigger: GGGTGGTGCTTCCCTGGACCAGAACAGACTGGAAAC...AGGAAGCAGTCTCTGGAGGCCAGAAAGAAAAGCCTTCTTTTTCACTAGGCCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CCA 90 bp TCTGAGGTGGTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGTTCTGGTCCAGGTCTTTGAGCCCCATTaGCTTGTGATGTTTTCCTCT +
Preference number: 4 (lower is better)
Translates to: SEVVAGCLLPSFQSVLVQVFEPH*LVMFSS
Trigger: AGAGGAAAACATCACAAGCCAATGGGGCTCAAAGAC...CTGGACCAGAACAGACTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR TCA 90 bp ATGACTGGCCAGGACTGGAACTTAACGGCCTTGAGAACATGTGGGATTTGTCTTGCGTGTAGTCCTCTTTaGCCCTGTGCAACAGAGGCT +
Preference number: 4 (lower is better)
Translates to: MTGQDWNLTALRTCGICLACSPL*PCATEA
Trigger: AGCCTCTGTTGCACAGGGTCAAAGAGGACTACACGC...AAGACAAATCCCACATGTTCTCAAGGCCGTTAAGTTCCAGTCCTGGCCAGTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR TCA 90 bp ATGACTGGCCAGGACTGGAACTTAACGGCCTTGAGAACATGTGGGATTTGTCTTGAACAAGGTGATGACTaGCAGGCACAGCTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: MTGQDWNLTALRTCGICLEQGDD*QAQLLL
Trigger: CAGGAGGAGCTGTGCCTGTCAGTCATCACCTTGTTC...AAGACAAATCCCACATGTTCTCAAGGCCGTTAAGTTCCAGTCCTGGCCAGTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR TCA 90 bp AGATACCAATCAGGGAATGACTGGCCAGGACTGGAACTTAACGGCCTTGAGAACAGGACTCACATGGGTTaGCGACGATTTCCTTGCCGT +
Preference number: 4 (lower is better)
Translates to: RYQSGNDWPGLELNGLENRTHMG*RRFPCR
Trigger: ACGGCAAGGAAATCGTCGTCAACCCATGTGAGTCCT...GTTCTCAAGGCCGTTAAGTTCCAGTCCTGGCCAGTCATTCCCTGATTGGTATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR TCA 90 bp TCCTGGCCTAGTGAAAAAGAAGGCTTTTCTTTCTGGCCTCCAGAGACTGCTTCCAGGACTCACATGGGTTaGCGACGATTTCCTTGCCGT +
Preference number: 4 (lower is better)
Translates to: SWPSEKEGFSFWPPETASRTHMG*RRFPCR
Trigger: ACGGCAAGGAAATCGTCGTCAACCCATGTGAGTCCT...GGAAGCAGTCTCTGGAGGCCAGAAAGAAAAGCCTTCTTTTTCACTAGGCCAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR GCA 90 bp TCCAGGATGTCTGAGGTGGTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGTTCTTGCCGTTCATTATTaGGCAAGCATTTCACCTTGG +
Preference number: 4 (lower is better)
Translates to: SRMSEVVAGCLLPSFQSVLAVHY*ASISPW
Trigger: CCAAGGTGAAATGCTTGCGCAATAATGAACGGCAAG...AACAGACTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGACATCCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR GCA 90 bp AGATACCAATCAGGGAATGACTGGCCAGGACTGGAACTTAACGGCCTTGAGAACGACCGGACCAGACCTTaGCGTTCATTATTGCGCAAG +
Preference number: 4 (lower is better)
Translates to: RYQSGNDWPGLELNGLENDRTRP*RSLLRK
Trigger: CTTGCGCAATAATGAACGGCAAGGTCTGGTCCGGTC...GTTCTCAAGGCCGTTAAGTTCCAGTCCTGGCCAGTCATTCCCTGATTGGTATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR GCA 90 bp CAATCAGGGAATGACTGGCCAGGACTGGAACTTAACGGCCTTGAGAACATGTGGAGGTGGGATGCTATGTaGTCGATGTGGGAACCAGTT +
Preference number: 4 (lower is better)
Translates to: QSGNDWPGLELNGLENMWRWDAM*SMWEPV
Trigger: AACTGGTTCCCACATCGAGCACATAGCATCCCACCT...CCACATGTTCTCAAGGCCGTTAAGTTCCAGTCCTGGCCAGTCATTCCCTGATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR GCA 90 bp ATGACTGGCCAGGACTGGAACTTAACGGCCTTGAGAACATGTGGGATTTGTCTTTGGTTGCAGGCTGCTTaGTGCCCAGTTTCCAGTCTG +
Preference number: 4 (lower is better)
Translates to: MTGQDWNLTALRTCGICLWLQAA*CPVSSL
Trigger: CAGACTGGAAACTGGGCAGCAAGCAGCCTGCAACCA...AAGACAAATCCCACATGTTCTCAAGGCCGTTAAGTTCCAGTCCTGGCCAGTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR GCA 90 bp TCTCCAGATACCAATCAGGGAATGACTGGCCAGGACTGGAACTTAACGGCCTTGCTGGCCTCCAGAGACTaGTTCCTTTGTAGGAAAAGG +
Preference number: 4 (lower is better)
Translates to: SPDTNQGMTGQDWNLTALLASRD*FLCRKR
Trigger: CCTTTTCCTACAAAGGAAGCAGTCTCTGGAGGCCAG...CAAGGCCGTTAAGTTCCAGTCCTGGCCAGTCATTCCCTGATTGGTATCTGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR GCA 90 bp CAATCAGGGAATGACTGGCCAGGACTGGAACTTAACGGCCTTGAGAACATGTGGCTGGCCTCCAGAGACTaGTTCCTTTGTAGGAAAAGG +
Preference number: 4 (lower is better)
Translates to: QSGNDWPGLELNGLENMWLASRD*FLCRKR
Trigger: CCTTTTCCTACAAAGGAAGCAGTCTCTGGAGGCCAG...CCACATGTTCTCAAGGCCGTTAAGTTCCAGTCCTGGCCAGTCATTCCCTGATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR GCA 90 bp GATGATGCTAGTGGGTGGAAGGTCCGTGCAATACACCAGCAGTGTGCATCTCAGAATACACCAGCAGTGTaGATCTCAGATGGCGAGTGT +
Preference number: 4 (lower is better)
Translates to: DDASGWKVRAIHQQCASQNTPAV*ISDGEC
Trigger: ACACTCGCCATCTGAGATGCACACTGCTGGTGTATT...CTGAGATGCACACTGCTGGTGTATTGCACGGACCTTCCACCCACTAGCATCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424136.5
ENST00000455477.5
CDS-3UTR CCA 90 bp CAATCAGGGAATGACTGGCCAGGACTGGAACTTAACGGCCTTGAGAACATGTGGGATGATGCTAGTGGGTaGAAGGTCCGTGCAATACAC +
Preference number: 4 (lower is better)
Translates to: QSGNDWPGLELNGLENMWDDASG*KVRAIH
Trigger: GTGTATTGCACGGACCTTCCACCCACTAGCATCATC...CCACATGTTCTCAAGGCCGTTAAGTTCCAGTCCTGGCCAGTCATTCCCTGATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CCA 90 bp GTCCGAAGGCTAACAGACTCCATCTTGCTTCTAACTTCCAAGCTGTCTTTGTTCCTGTGCAACAGAGGCTaGAGCCAGTCCCTGTTCACC +
Preference number: 4 (lower is better)
Translates to: VRRLTDSILLLTSKLSLFLCNRG*SQSLFT
Trigger: GGTGAACAGGGACTGGCTCCAGCCTCTGTTGCACAG...GAACAAAGACAGCTTGGAAGTTAGAAGCAAGATGGAGTCTGTTAGCCTTCGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424136.5
CDS-3UTR CCA 90 bp TCCTGGCCTAGTGAAAAAGAAGGCTTTTCTTTCTGGCCTCCAGAGACTGCTTCCTATTGCCCTTCTGGATaGAGGACTCCTTGGGGATGC +
Preference number: 4 (lower is better)
Translates to: SWPSEKEGFSFWPPETASYCPSG*RTPWGC
Trigger: GCATCCCCAAGGAGTCCTCCATCCAGAAGGGCAATA...GGAAGCAGTCTCTGGAGGCCAGAAAGAAAAGCCTTCTTTTTCACTAGGCCAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CCA 90 bp GACTGGCCAGGACTGGAACTTAACGGCCTTGAGAACATGTGGGATTTGTCTTTGGTGAAGGCCCATACCTaGGACTTTGCATCTTCGCCT +
Preference number: 4 (lower is better)
Translates to: DWPGLELNGLENMWDLSLVKAHT*DFASSP
Trigger: AGGCGAAGATGCAAAGTCCCAGGTATGGGCCTTCAC...CAAAGACAAATCCCACATGTTCTCAAGGCCGTTAAGTTCCAGTCCTGGCCAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CCA 90 bp TCCTGGCCTAGTGAAAAAGAAGGCTTTTCTTTCTGGCCTCCAGAGACTGCTTCCTCCTGGAGGATCTGCTaGGTGTATGTGAAGGCCCAT +
Preference number: 4 (lower is better)
Translates to: SWPSEKEGFSFWPPETASSWRIC*VYVKAH
Trigger: ATGGGCCTTCACATACACCCAGCAGATCCTCCAGGA...GGAAGCAGTCTCTGGAGGCCAGAAAGAAAAGCCTTCTTTTTCACTAGGCCAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CCA 90 bp CCTGGCCTAGTGAAAAAGAAGGCTTTTCTTTCTGGCCTCCAGAGACTGCTTCCTTCCTGGAGGATCTGCTaGGTGTATGTGAAGGCCCAT +
Preference number: 4 (lower is better)
Translates to: PGLVKKKAFLSGLQRLLPSWRIC*VYVKAH
Trigger: ATGGGCCTTCACATACACCCAGCAGATCCTCCAGGA...AGGAAGCAGTCTCTGGAGGCCAGAAAGAAAAGCCTTCTTTTTCACTAGGCCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CCA 90 bp AGATACCAATCAGGGAATGACTGGCCAGGACTGGAACTTAACGGCCTTGAGAACGTATCGAGGCAGAGGTaGGATGCTATGTGCTCGATG +
Preference number: 4 (lower is better)
Translates to: RYQSGNDWPGLELNGLENVSRQR*DAMCSM
Trigger: CATCGAGCACATAGCATCCCACCTCTGCCTCGATAC...GTTCTCAAGGCCGTTAAGTTCCAGTCCTGGCCAGTCATTCCCTGATTGGTATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CCA 90 bp TCCTGGCCTAGTGAAAAAGAAGGCTTTTCTTTCTGGCCTCCAGAGACTGCTTCCACCATGTCCCAGTGCTaGCTCATGAGTGAGGACTCA +
Preference number: 4 (lower is better)
Translates to: SWPSEKEGFSFWPPETASTMSQC*LMSEDS
Trigger: TGAGTCCTCACTCATGAGCCAGCACTGGGACATGGT...GGAAGCAGTCTCTGGAGGCCAGAAAGAAAAGCCTTCTTTTTCACTAGGCCAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CCA 90 bp GACTGGCCAGGACTGGAACTTAACGGCCTTGAGAACATGTGGGATTTGTCTTTGACCATGTCCCAGTGCTaGCTCATGAGTGAGGACTCA +
Preference number: 4 (lower is better)
Translates to: DWPGLELNGLENMWDLSLTMSQC*LMSEDS
Trigger: TGAGTCCTCACTCATGAGCCAGCACTGGGACATGGT...CAAAGACAAATCCCACATGTTCTCAAGGCCGTTAAGTTCCAGTCCTGGCCAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CCA 90 bp TCTCCAGATACCAATCAGGGAATGACTGGCCAGGACTGGAACTTAACGGCCTTGGAAGGCTTTTCTTTCTaGCCTCCAGAGACTGCTTCC +
Preference number: 4 (lower is better)
Translates to: SPDTNQGMTGQDWNLTALEGFSF*PPETAS
Trigger: GGAAGCAGTCTCTGGAGGCCAGAAAGAAAAGCCTTC...CAAGGCCGTTAAGTTCCAGTCCTGGCCAGTCATTCCCTGATTGGTATCTGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CCA 90 bp TCCTGGCCTAGTGAAAAAGAAGGCTTTTCTTTCTGGCCTCCAGAGACTGCTTCCCAACGCGCCACTTTTTaGCATTCAGATACCGCCGCT +
Preference number: 4 (lower is better)
Translates to: SWPSEKEGFSFWPPETASQRATF*HSDTAA
Trigger: AGCGGCGGTATCTGAATGCCAAAAAGTGGCGCGTTG...GGAAGCAGTCTCTGGAGGCCAGAAAGAAAAGCCTTCTTTTTCACTAGGCCAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000349752.10
ENST00000406653.5
CDS-3UTR TCA 90 bp ATGACTGGCCAGGACTGGAACTTAACGGCCTTGAGAACATGTGGGATTTGTCTTAGGACTCACATGGGTTaGCGACGATTTCCTTGCCGT +
Preference number: 4 (lower is better)
Translates to: MTGQDWNLTALRTCGICLRTHMG*RRFPCR
Trigger: ACGGCAAGGAAATCGTCGTCAACCCATGTGAGTCCT...AAGACAAATCCCACATGTTCTCAAGGCCGTTAAGTTCCAGTCCTGGCCAGTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR TCA 90 bp TCCTGGCCTAGTGAAAAAGAAGGCTTTTCTTTCTGGCCTCCAGAGACTGCTTCCCACTCTCCCGCTGGTTaGAAGCATACAGCTTATAGG +
Preference number: 4 (lower is better)
Translates to: SWPSEKEGFSFWPPETASHSPAG*KHTAYR
Trigger: CCTATAAGCTGTATGCTTTCAACCAGCGGGAGAGTG...GGAAGCAGTCTCTGGAGGCCAGAAAGAAAAGCCTTCTTTTTCACTAGGCCAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349752.10
ENST00000406653.5
CDS-3UTR GCA 90 bp AGATACCAATCAGGGAATGACTGGCCAGGACTGGAACTTAACGGCCTTGAGAACGTCTCTGTCGGATATTaGCCTTCTGGATGGAGGACT +
Preference number: 4 (lower is better)
Translates to: RYQSGNDWPGLELNGLENVSVGY*PSGWRT
Trigger: AGTCCTCCATCCAGAAGGGCAATATCCGACAGAGAC...GTTCTCAAGGCCGTTAAGTTCCAGTCCTGGCCAGTCATTCCCTGATTGGTATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR GCA 90 bp AGGCTAACAGACTCCATCTTGCTTCTAACTTCCAAGCTGTCTTTGTTCAATCCTGAACCCTTAGGGGTCTaGACTTCAGGTCCCGTCGGC +
Preference number: 4 (lower is better)
Translates to: RLTDSILLLTSKLSLFNPEPLGV*TSGPVG
Trigger: GCCGACGGGACCTGAAGTGCAGACCCCTAAGGGTTC...AGGATTGAACAAAGACAGCTTGGAAGTTAGAAGCAAGATGGAGTCTGTTAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424136.5
CDS-3UTR CCA 90 bp TCTGAGGTGGTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGTTCTGGTCCAGTTCTTGCAAGAGACATaGGAAATGACATACAGCAAG +
Preference number: 4 (lower is better)
Translates to: SEVVAGCLLPSFQSVLVQFLQET*EMTYSK
Trigger: CTTGCTGTATGTCATTTCCCATGTCTCTTGCAAGAA...CTGGACCAGAACAGACTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324589.9
ENST00000406653.5
CDS-3UTR CCA 90 bp AGGATGTCTGAGGTGGTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGTTCTGCTTCAGCTGTCCGCTTaGTGTTCTTTATATACGTGT +
Preference number: 4 (lower is better)
Translates to: RMSEVVAGCLLPSFQSVLLQLSA*CSLYTC
Trigger: ACACGTATATAAAGAACACCAAGCGGACAGCTGAAG...CAGAACAGACTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGACATCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CCA 90 bp TCCAGGATGTCTGAGGTGGTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGTTCTTCAGCTGTCCGCTTaGTGTTCTTTATATACGTGT +
Preference number: 4 (lower is better)
Translates to: SRMSEVVAGCLLPSFQSVLQLSA*CSLYTC
Trigger: ACACGTATATAAAGAACACCAAGCGGACAGCTGAAG...AACAGACTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGACATCCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CCA 90 bp CCTGGCCTAGTGAAAAAGAAGGCTTTTCTTTCTGGCCTCCAGAGACTGCTTCCTTACCACTTGAAGCTCTaGCAGCGCAGATTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: PGLVKKKAFLSGLQRLLPYHLKL*QRRFFL
Trigger: GAGGAAGAATCTGCGCTGCCAGAGCTTCAAGTGGTA...AGGAAGCAGTCTCTGGAGGCCAGAAAGAAAAGCCTTCTTTTTCACTAGGCCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CCA 90 bp TCTCCAGATACCAATCAGGGAATGACTGGCCAGGACTGGAACTTAACGGCCTTGGCTATGTGCTCGATGTaGGAACCAGTTTTGGTCCAT +
Preference number: 4 (lower is better)
Translates to: SPDTNQGMTGQDWNLTALAMCSM*EPVLVH
Trigger: ATGGACCAAAACTGGTTCCCACATCGAGCACATAGC...CAAGGCCGTTAAGTTCCAGTCCTGGCCAGTCATTCCCTGATTGGTATCTGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CCA 90 bp CCTGGCCTAGTGAAAAAGAAGGCTTTTCTTTCTGGCCTCCAGAGACTGCTTCCTATGACTGGCCAGGACTaGAACTTAACGGCCTTGAGA +
Preference number: 4 (lower is better)
Translates to: PGLVKKKAFLSGLQRLLPMTGQD*NLTALR
Trigger: TCTCAAGGCCGTTAAGTTCCAGTCCTGGCCAGTCAT...AGGAAGCAGTCTCTGGAGGCCAGAAAGAAAAGCCTTCTTTTTCACTAGGCCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CCA 90 bp CCTGGCCTAGTGAAAAAGAAGGCTTTTCTTTCTGGCCTCCAGAGACTGCTTCCTGAAGGCTTTTCTTTCTaGCCTCCAGAGACTGCTTCC +
Preference number: 4 (lower is better)
Translates to: PGLVKKKAFLSGLQRLLPEGFSF*PPETAS
Trigger: GGAAGCAGTCTCTGGAGGCCAGAAAGAAAAGCCTTC...AGGAAGCAGTCTCTGGAGGCCAGAAAGAAAAGCCTTCTTTTTCACTAGGCCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR TCA 90 bp CAATCAGGGAATGACTGGCCAGGACTGGAACTTAACGGCCTTGAGAACATGTGGAGTCATCCACTAATATaGTTTCCCGGATCAGATGCG +
Preference number: 4 (lower is better)
Translates to: QSGNDWPGLELNGLENMWSHPLI*FPGSDA
Trigger: CGCATCTGATCCGGGAAATCATATTAGTGGATGACT...CCACATGTTCTCAAGGCCGTTAAGTTCCAGTCCTGGCCAGTCATTCCCTGATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR TCA 90 bp GACTGGCCAGGACTGGAACTTAACGGCCTTGAGAACATGTGGGATTTGTCTTTGTGTGGGATTTGTCTTTaGGCCCCATTGGCTTGTGAT +
Preference number: 4 (lower is better)
Translates to: DWPGLELNGLENMWDLSLCGICL*APLACD
Trigger: ATCACAAGCCAATGGGGCTCAAAGACAAATCCCACA...CAAAGACAAATCCCACATGTTCTCAAGGCCGTTAAGTTCCAGTCCTGGCCAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR TCA 90 bp AGGATGTCTGAGGTGGTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGTTCTGGCAGTAAGGATCAAATaGGGCAACTGTGGATATAAA +
Preference number: 4 (lower is better)
Translates to: RMSEVVAGCLLPSFQSVLAVRIK*GNCGYK
Trigger: TTTATATCCACAGTTGCCTCATTTGATCCTTACTGC...CAGAACAGACTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGACATCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406653.5
CDS-3UTR GCA 90 bp ATGACTGGCCAGGACTGGAACTTAACGGCCTTGAGAACATGTGGGATTTGTCTTTCCTCAGGTCCAATCTaGTCTCAACATTCCCGAAGG +
Preference number: 4 (lower is better)
Translates to: MTGQDWNLTALRTCGICLSSGPI*SQHSRR
Trigger: CCTTCGGGAATGTTGAGAGCAGATTGGACCTGAGGA...AAGACAAATCCCACATGTTCTCAAGGCCGTTAAGTTCCAGTCCTGGCCAGTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR GCA 90 bp ATGACTGGCCAGGACTGGAACTTAACGGCCTTGAGAACATGTGGGATTTGTCTTGTCTCTGTCGGATATTaGCCTTCTGGATGGAGGACT +
Preference number: 4 (lower is better)
Translates to: MTGQDWNLTALRTCGICLVSVGY*PSGWRT
Trigger: AGTCCTCCATCCAGAAGGGCAATATCCGACAGAGAC...AAGACAAATCCCACATGTTCTCAAGGCCGTTAAGTTCCAGTCCTGGCCAGTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR GCA 90 bp AGATACCAATCAGGGAATGACTGGCCAGGACTGGAACTTAACGGCCTTGAGAACCCATACCTGGGACTTTaGATCTTCGCCTTTGACCTT +
Preference number: 4 (lower is better)
Translates to: RYQSGNDWPGLELNGLENPYLGL*IFAFDL
Trigger: AAGGTCAAAGGCGAAGATGCAAAGTCCCAGGTATGG...GTTCTCAAGGCCGTTAAGTTCCAGTCCTGGCCAGTCATTCCCTGATTGGTATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR GCA 90 bp TCCTGGCCTAGTGAAAAAGAAGGCTTTTCTTTCTGGCCTCCAGAGACTGCTTCCCCAGTTTTGGTCCATTaGTGTCGGTCATCTCCATTC +
Preference number: 4 (lower is better)
Translates to: SWPSEKEGFSFWPPETASPVLVH*CRSSPF
Trigger: GAATGGAGATGACCGACAGCAATGGACCAAAACTGG...GGAAGCAGTCTCTGGAGGCCAGAAAGAAAAGCCTTCTTTTTCACTAGGCCAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR GCA 90 bp CCTGGCCTAGTGAAAAAGAAGGCTTTTCTTTCTGGCCTCCAGAGACTGCTTCCTAATACACCAGCAGTGTaGATCTCAGATGGCGAGTGT +
Preference number: 4 (lower is better)
Translates to: PGLVKKKAFLSGLQRLLPNTPAV*ISDGEC
Trigger: ACACTCGCCATCTGAGATGCACACTGCTGGTGTATT...AGGAAGCAGTCTCTGGAGGCCAGAAAGAAAAGCCTTCTTTTTCACTAGGCCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CCA 90 bp ATGACTGGCCAGGACTGGAACTTAACGGCCTTGAGAACATGTGGGATTTGTCTTGATGATGCTAGTGGGTaGAAGGTCCGTGCAATACAC +
Preference number: 4 (lower is better)
Translates to: MTGQDWNLTALRTCGICLDDASG*KVRAIH
Trigger: GTGTATTGCACGGACCTTCCACCCACTAGCATCATC...AAGACAAATCCCACATGTTCTCAAGGCCGTTAAGTTCCAGTCCTGGCCAGTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CCA 90 bp ACCTTGCCGTTCATTATTGCGCAAGCATTTCACCTTGGGCAACTTGATGAGCTGGATGATGCTAGTGGGTaGAAGGTCCGTGCAATACAC +
Preference number: 4 (lower is better)
Translates to: TLPFIIAQAFHLGQLDELDDASG*KVRAIH
Trigger: GTGTATTGCACGGACCTTCCACCCACTAGCATCATC...CAGCTCATCAAGTTGCCCAAGGTGAAATGCTTGCGCAATAATGAACGGCAAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424136.5
ENST00000455477.5
CDS-3UTR CCA 90 bp GTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGTTCTGGTCCAGGGAAGCACCTCTTTATATACGTGTTaGCATTTCCATCAGGGAAAA +
Preference number: 4 (lower is better)
Translates to: VAGCLLPSFQSVLVQGSTSLYTC*HFHQGK
Trigger: TTTTCCCTGATGGAAATGCCAACACGTATATAAAGA...GGTGCTTCCCTGGACCAGAACAGACTGGAAACTGGGCAGCAAGCAGCCTGCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CCA 90 bp TCCTGGCCTAGTGAAAAAGAAGGCTTTTCTTTCTGGCCTCCAGAGACTGCTTCCTGTGGGAACCAGTTTTaGTCCATTGCTGTCGGTCAT +
Preference number: 4 (lower is better)
Translates to: SWPSEKEGFSFWPPETASCGNQF*SIAVGH
Trigger: ATGACCGACAGCAATGGACCAAAACTGGTTCCCACA...GGAAGCAGTCTCTGGAGGCCAGAAAGAAAAGCCTTCTTTTTCACTAGGCCAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CCA 90 bp CCTGGCCTAGTGAAAAAGAAGGCTTTTCTTTCTGGCCTCCAGAGACTGCTTCCTGCTATGTGCTCGATGTaGGAACCAGTTTTGGTCCAT +
Preference number: 4 (lower is better)
Translates to: PGLVKKKAFLSGLQRLLPAMCSM*EPVLVH
Trigger: ATGGACCAAAACTGGTTCCCACATCGAGCACATAGC...AGGAAGCAGTCTCTGGAGGCCAGAAAGAAAAGCCTTCTTTTTCACTAGGCCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CCA 90 bp ATGACTGGCCAGGACTGGAACTTAACGGCCTTGAGAACATGTGGGATTTGTCTTGGCCTTGAGAACATGTaGGATTTGTCTTTGAGCCCC +
Preference number: 4 (lower is better)
Translates to: MTGQDWNLTALRTCGICLGLENM*DLSLSP
Trigger: GGGGCTCAAAGACAAATCCCACATGTTCTCAAGGCC...AAGACAAATCCCACATGTTCTCAAGGCCGTTAAGTTCCAGTCCTGGCCAGTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CCA 90 bp AGATACCAATCAGGGAATGACTGGCCAGGACTGGAACTTAACGGCCTTGAGAACCAATCAGGGAATGACTaGCCAGGACTGGAACTTAAC +
Preference number: 4 (lower is better)
Translates to: RYQSGNDWPGLELNGLENQSGND*PGLELN
Trigger: GTTAAGTTCCAGTCCTGGCCAGTCATTCCCTGATTG...GTTCTCAAGGCCGTTAAGTTCCAGTCCTGGCCAGTCATTCCCTGATTGGTATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
3UTR CAA 72 bp GTCCCAGTCAGCGTCCGAAGGCTAACAGACTCCATCTaGCTTCTAACTTCCAAGCTGTCTTTGTTCAATCCT +
Preference number: 4 (lower is better)
Translates to: VPVSVRRLTDSI*LLTSKLSLFNP
Trigger: AGGATTGAACAAAGACAGCTTGGAAGTTAGAAGCAAGATGGAGTCTGTTAGCCTTCGGACGCTGACTGGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424136.5
CDS-3UTR TCA 90 bp TCCTGGCCTAGTGAAAAAGAAGGCTTTTCTTTCTGGCCTCCAGAGACTGCTTCCAGTCATCCACTAATATaGTTTCCCGGATCAGATGCG +
Preference number: 4 (lower is better)
Translates to: SWPSEKEGFSFWPPETASSHPLI*FPGSDA
Trigger: CGCATCTGATCCGGGAAATCATATTAGTGGATGACT...GGAAGCAGTCTCTGGAGGCCAGAAAGAAAAGCCTTCTTTTTCACTAGGCCAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR TCA 90 bp GACTGGCCAGGACTGGAACTTAACGGCCTTGAGAACATGTGGGATTTGTCTTTGAGTCATCCACTAATATaGTTTCCCGGATCAGATGCG +
Preference number: 4 (lower is better)
Translates to: DWPGLELNGLENMWDLSLSHPLI*FPGSDA
Trigger: CGCATCTGATCCGGGAAATCATATTAGTGGATGACT...CAAAGACAAATCCCACATGTTCTCAAGGCCGTTAAGTTCCAGTCCTGGCCAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR TCA 90 bp ATACAGCTTATAGGGGTCGTCACCAACGCGCCACTTTTTGGCATTCAGATACCGAGTCATCCACTAATATaGTTTCCCGGATCAGATGCG +
Preference number: 4 (lower is better)
Translates to: IQLIGVVTNAPLFGIQIPSHPLI*FPGSDA
Trigger: CGCATCTGATCCGGGAAATCATATTAGTGGATGACT...CGGTATCTGAATGCCAAAAAGTGGCGCGTTGGTGACGACCCCTATAAGCTGTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424136.5
ENST00000455477.5
CDS-3UTR GCA 90 bp ATGACTGGCCAGGACTGGAACTTAACGGCCTTGAGAACATGTGGGATTTGTCTTCCAGTTTTGGTCCATTaGTGTCGGTCATCTCCATTC +
Preference number: 4 (lower is better)
Translates to: MTGQDWNLTALRTCGICLPVLVH*CRSSPF
Trigger: GAATGGAGATGACCGACAGCAATGGACCAAAACTGG...AAGACAAATCCCACATGTTCTCAAGGCCGTTAAGTTCCAGTCCTGGCCAGTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CCA 90 bp TCCACTAATATGATTTCCCGGATCAGATGCGTAGGGGTGCGGTTTAATACACTGGATGATGCTAGTGGGTaGAAGGTCCGTGCAATACAC +
Preference number: 4 (lower is better)
Translates to: STNMISRIRCVGVRFNTLDDASG*KVRAIH
Trigger: GTGTATTGCACGGACCTTCCACCCACTAGCATCATC...CAGTGTATTAAACCGCACCCCTACGCATCTGATCCGGGAAATCATATTAGTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424136.5
ENST00000455477.5
CDS-3UTR CCA 90 bp TCTCCAGATACCAATCAGGGAATGACTGGCCAGGACTGGAACTTAACGGCCTTGCTTCAGCTGTCCGCTTaGTGTTCTTTATATACGTGT +
Preference number: 4 (lower is better)
Translates to: SPDTNQGMTGQDWNLTALLQLSA*CSLYTC
Trigger: ACACGTATATAAAGAACACCAAGCGGACAGCTGAAG...CAAGGCCGTTAAGTTCCAGTCCTGGCCAGTCATTCCCTGATTGGTATCTGGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CCA 90 bp GACTGGCCAGGACTGGAACTTAACGGCCTTGAGAACATGTGGGATTTGTCTTTGGTCTTTGAGCCCCATTaGCTTGTGATGTTTTCCTCT +
Preference number: 4 (lower is better)
Translates to: DWPGLELNGLENMWDLSLVFEPH*LVMFSS
Trigger: AGAGGAAAACATCACAAGCCAATGGGGCTCAAAGAC...CAAAGACAAATCCCACATGTTCTCAAGGCCGTTAAGTTCCAGTCCTGGCCAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR TCA 90 bp GCATTTCACCTTGGGCAACTTGATGAGCTGTTTACAGTCATCAGGGTCATTGCTAAGGAGATTTCTCTTTaGCCCTGTGCAACAGAGGCT +
Preference number: 4 (lower is better)
Translates to: AFHLGQLDELFTVIRVIAKEISL*PCATEA
Trigger: AGCCTCTGTTGCACAGGGTCAAAGAGAAATCTCCTT...AGCAATGACCCTGATGACTGTAAACAGCTCATCAAGTTGCCCAAGGTGAAATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455477.5
CDS-3UTR CCA 90 bp AGGCTAACAGACTCCATCTTGCTTCTAACTTCCAAGCTGTCTTTGTTCAATCCTCAACGCGCCACTTTTTaGCATTCAGATACCGCCGCT +
Preference number: 4 (lower is better)
Translates to: RLTDSILLLTSKLSLFNPQRATF*HSDTAA
Trigger: AGCGGCGGTATCTGAATGCCAAAAAGTGGCGCGTTG...AGGATTGAACAAAGACAGCTTGGAAGTTAGAAGCAAGATGGAGTCTGTTAGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424136.5
CDS-3UTR CCA 90 bp TCCTGGCCTAGTGAAAAAGAAGGCTTTTCTTTCTGGCCTCCAGAGACTGCTTCCCTGGCAGCCATCAATTaGCCATCTATTAATAGCCAA +
Preference number: 4 (lower is better)
Translates to: SWPSEKEGFSFWPPETASLAAIN*PSINSQ
Trigger: TTGGCTATTAATAGATGGCCAATTGATGGCTGCCAG...GGAAGCAGTCTCTGGAGGCCAGAAAGAAAAGCCTTCTTTTTCACTAGGCCAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406653.5
3UTR CAA 72 bp AGACCTTGCCGTTCATTATTGCGCAAGCATTTCACCTaGGGCAACTTGATGAGCTGTTTACAGTCATCAGGG +
Preference number: 4 (lower is better)
Translates to: RPCRSLLRKHFT*GNLMSCLQSSG
Trigger: CCCTGATGACTGTAAACAGCTCATCAAGTTGCCCAAGGTGAAATGCTTGCGCAATAATGAACGGCAAGGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424136.5
ENST00000455477.5
CDS-3UTR GCA 90 bp ATTGCGCAAGCATTTCACCTTGGGCAACTTGATGAGCTGTTTACAGTCATCAGGCTTGCCGTTCATTATTaGGCAAGCATTTCACCTTGG +
Preference number: 4 (lower is better)
Translates to: IAQAFHLGQLDELFTVIRLAVHY*ASISPW
Trigger: CCAAGGTGAAATGCTTGCGCAATAATGAACGGCAAG...CCTGATGACTGTAAACAGCTCATCAAGTTGCCCAAGGTGAAATGCTTGCGCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424136.5
ENST00000455477.5
CDS-3UTR GCA 90 bp TTGCCGTTCATTATTGCGCAAGCATTTCACCTTGGGCAACTTGATGAGCTGTTTAATACACCAGCAGTGTaGATCTCAGATGGCGAGTGT +
Preference number: 4 (lower is better)
Translates to: LPFIIAQAFHLGQLDELFNTPAV*ISDGEC
Trigger: ACACTCGCCATCTGAGATGCACACTGCTGGTGTATT...AAACAGCTCATCAAGTTGCCCAAGGTGAAATGCTTGCGCAATAATGAACGGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424136.5
ENST00000455477.5
CDS-3UTR CCA 90 bp AGATACCAATCAGGGAATGACTGGCCAGGACTGGAACTTAACGGCCTTGAGAACTTCTTGCAAGAGACATaGGAAATGACATACAGCAAG +
Preference number: 4 (lower is better)
Translates to: RYQSGNDWPGLELNGLENFLQET*EMTYSK
Trigger: CTTGCTGTATGTCATTTCCCATGTCTCTTGCAAGAA...GTTCTCAAGGCCGTTAAGTTCCAGTCCTGGCCAGTCATTCCCTGATTGGTATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324589.9
ENST00000406653.5
CDS-3UTR CCA 90 bp TCTCCAGATACCAATCAGGGAATGACTGGCCAGGACTGGAACTTAACGGCCTTGTCTTTATATACGTGTTaGCATTTCCATCAGGGAAAA +
Preference number: 4 (lower is better)
Translates to: SPDTNQGMTGQDWNLTALSLYTC*HFHQGK
Trigger: TTTTCCCTGATGGAAATGCCAACACGTATATAAAGA...CAAGGCCGTTAAGTTCCAGTCCTGGCCAGTCATTCCCTGATTGGTATCTGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CCA 90 bp ATGACTGGCCAGGACTGGAACTTAACGGCCTTGAGAACATGTGGGATTTGTCTTTCTTTATATACGTGTTaGCATTTCCATCAGGGAAAA +
Preference number: 4 (lower is better)
Translates to: MTGQDWNLTALRTCGICLSLYTC*HFHQGK
Trigger: TTTTCCCTGATGGAAATGCCAACACGTATATAAAGA...AAGACAAATCCCACATGTTCTCAAGGCCGTTAAGTTCCAGTCCTGGCCAGTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS GCA 90 bp TTCCCCACGCCGCCACCGCGGCTGCCGCCGCCGCCGCCGCCGCCTTaGCCGCTGCCGCCGATAGGGAAACTGACTCGAGCAGCGAGAGGG +
Preference number: 5 (lower is better)
Translates to: FPTPPPRLPPPPPPP*PLPPIGKLTRAARG
Trigger: CCCTCTCGCTGCTCGAGTCAGTTTCCCTATCGGCGGCAGCGGGCAAGGCGGCGGCGGCGGCGGCGGCAGCCGCGGTGGCGGCGTGGGGAA
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430167.1
CDS CCA 90 bp GCACCCCGAAGACTGGCAGAACCAGCCGACGAGTCAGGCGCCGCATaGTCCCCTTTGCCGCTTCCTCTCCGCGGCGCTACGTCCCGGGGG +
Preference number: 5 (lower is better)
Translates to: APRRLAEPADESGAA*SPLPLPLRGATSRG
Trigger: CCCCCGGGACGTAGCGCCGCGGAGAGGAAGCGGCAAAGGGGACCATGCGGCGCCTGACTCGTCGGCTGGTTCTGCCAGTCTTCGGGGTGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000430167.1
CDS CCA 90 bp GCGGTCAGGGTTGGCGGGGCAGGAGTCCTGGCGAGCGCCTCGCTCTaGGGAGCTCTAGACCCAGGATCCGGTTGGAGGGGCGGCAGGATC +
Preference number: 5 (lower is better)
Translates to: AVRVGGAGVLASASL*GALDPGSGWRGGRI
Trigger: GATCCTGCCGCCCCTCCAACCGGATCCTGGGTCTAGAGCTCCCCAGAGCGAGGCGCTCGCCAGGACTCCTGCCCCGCCAACCCTGACCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349752.10
ENST00000430167.1
CDS CCA 90 bp ATCCTGCAAGGCGCCCTTCCCGCTTCGAAGAGAAGCGAGCCTGGGTaGGGGGTGCAGGGCGACCCGAAACGTGGCAGGGAAGGACCGAGG +
Preference number: 5 (lower is better)
Translates to: ILQGALPASKRSEPG*GVQGDPKRGREGPR
Trigger: CCTCGGTCCTTCCCTGCCACGTTTCGGGTCGCCCTGCACCCCCCACCCAGGCTCGCTTCTCTTCGAAGCGGGAAGGGCGCCTTGCAGGAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349752.10
ENST00000430167.1
CDS-3UTR CAA 90 bp AGGATGTCTGAGGTGGTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGTTCTGCCCCGGCGGTCAGGGTaGGCGGGGCAGGAGTCCTGG +
Preference number: 5 (lower is better)
Translates to: RMSEVVAGCLLPSFQSVLPRRSG*AGQESW
Trigger: CCAGGACTCCTGCCCCGCCAACCCTGACCGCCGGGG...CAGAACAGACTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGACATCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349752.10
CDS-3UTR CAA 90 bp AGTGGTGCCCTGGGCGATGTCAGCGCCCCGAATCCGGGACCGGACCAGACCTTGGGACCGGACCAGACCTaGCCGTTCATTATTGCGCAA +
Preference number: 5 (lower is better)
Translates to: SGALGDVSAPNPGPDQTLGPDQT*PFIIAQ
Trigger: TTGCGCAATAATGAACGGCAAGGTCTGGTCCGGTCC...CAAGGTCTGGTCCGGTCCCGGATTCGGGGCGCTGACATCGCCCAGGGCACCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424136.5
ENST00000455477.5
CDS CCA 90 bp TACCCAGAAGAACAGCAGCACCGTGATCCAGAGCACCCCGAAGACTaGCAGAACCAGCCGACGAGTCAGGCGCCGCATGGTCCCCTTTGC +
Preference number: 5 (lower is better)
Translates to: YPEEQQHRDPEHPED*QNQPTSQAPHGPLC
Trigger: GCAAAGGGGACCATGCGGCGCCTGACTCGTCGGCTGGTTCTGCCAGTCTTCGGGGTGCTCTGGATCACGGTGCTGCTGTTCTTCTGGGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000430167.1
CDS-3UTR CAA 90 bp TCCAGGATGTCTGAGGTGGTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGTTGCCGCATGGTCCCCTTaGCCGCTTCCTCTCCGCGGC +
Preference number: 5 (lower is better)
Translates to: SRMSEVVAGCLLPSFQSVAAWSP*PLPLRG
Trigger: GCCGCGGAGAGGAAGCGGCAAAGGGGACCATGCGGC...AACAGACTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGACATCCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324589.9
ENST00000349752.10
CDS-3UTR CAA 90 bp AGTGTCCGGGATGGCCCGATTGCTGGAGATCCGCTCACTCTCCCGCTGGTTGAATCCGGGATGGCCCGATaGCTGGAGATCCGCTCACTC +
Preference number: 5 (lower is better)
Translates to: SVRDGPIAGDPLTLPLVESGMAR*LEIRSL
Trigger: GAGTGAGCGGATCTCCAGCAATCGGGCCATCCCGGA...TTCAACCAGCGGGAGAGTGAGCGGATCTCCAGCAATCGGGCCATCCCGGACACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424136.5
ENST00000455477.5
CDS GCA 90 bp TCCAGTCTGTTCTGGTCCAGGGAAGCACCACCCCATGGCCCTTGCTaGTTCTGGCAGGGGTCCTCAAGAGCTCACCATGTCCCAGTGCTG +
Preference number: 5 (lower is better)
Translates to: SSLFWSREAPPHGPC*FWQGSSRAHHVPVL
Trigger: CAGCACTGGGACATGGTGAGCTCTTGAGGACCCCTGCCAGAAGCAGCAAGGGCCATGGGGTGGTGCTTCCCTGGACCAGAACAGACTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
ENST00000475320.5
ENST00000486564.5
CDS-3UTR CAA 90 bp GTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGTTCTGGTCCAGGGAAGCACCTCCGGGATGGCCCGATaGCTGGAGATCCGCTCACTC +
Preference number: 5 (lower is better)
Translates to: VAGCLLPSFQSVLVQGSTSGMAR*LEIRSL
Trigger: GAGTGAGCGGATCTCCAGCAATCGGGCCATCCCGGA...GGTGCTTCCCTGGACCAGAACAGACTGGAAACTGGGCAGCAAGCAGCCTGCAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349752.10
ENST00000406653.5
CDS GCA 90 bp GTTTCCAGTCTGTTCTGGTCCAGGGAAGCACCACCCCATGGCCCTTaGTGCTTCTGGCAGGGGTCCTCAAGAGCTCACCATGTCCCAGTG +
Preference number: 5 (lower is better)
Translates to: VSSLFWSREAPPHGP*CFWQGSSRAHHVPV
Trigger: CACTGGGACATGGTGAGCTCTTGAGGACCCCTGCCAGAAGCAGCAAGGGCCATGGGGTGGTGCTTCCCTGGACCAGAACAGACTGGAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
ENST00000475320.5
ENST00000486564.5
CDS CCA 90 bp CTGCCCAGTTTCCAGTCTGTTCTGGTCCAGGGAAGCACCACCCCATaGCCCTTGCTGCTTCTGGCAGGGGTCCTCAAGAGCTCACCATGT +
Preference number: 5 (lower is better)
Translates to: LPSFQSVLVQGSTTP*PLLLLAGVLKSSPC
Trigger: ACATGGTGAGCTCTTGAGGACCCCTGCCAGAAGCAGCAAGGGCCATGGGGTGGTGCTTCCCTGGACCAGAACAGACTGGAAACTGGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
ENST00000475320.5
ENST00000486564.5
CDS CCA 90 bp GGGGCGCCAGGGAACAAGGTGATGACTGACAGGCACAGCTCCTCCTaGAGGATCTGCTGGGTGTATGTGAAGGCCCATACTTCCCGAAGG +
Preference number: 5 (lower is better)
Translates to: GAPGNKVMTDRHSSS*RICWVYVKAHTSRR
Trigger: CCTTCGGGAAGTATGGGCCTTCACATACACCCAGCAGATCCTCCAGGAGGAGCTGTGCCTGTCAGTCATCACCTTGTTCCCTGGCGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486564.5
CDS-3UTR CAA 90 bp CAATCAGGGAATGACTGGCCAGGACTGGAACTTAACGGCCTTGAGAACATGTGGGCCGCATGGTCCCCTTaGCCGCTTCCTCTCCGCGGC +
Preference number: 5 (lower is better)
Translates to: QSGNDWPGLELNGLENMWAAWSP*PLPLRG
Trigger: GCCGCGGAGAGGAAGCGGCAAAGGGGACCATGCGGC...CCACATGTTCTCAAGGCCGTTAAGTTCCAGTCCTGGCCAGTCATTCCCTGATTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324589.9
ENST00000349752.10
CDS-3UTR CAA 90 bp GCCCTGGGCGATGTCAGCGCCCCGAATCCGGGACCGGACCAGACCTTGCCGTTCTTCACCTTGGGCAACTaGATGAGCTGTTTACAGTCA +
Preference number: 5 (lower is better)
Translates to: ALGDVSAPNPGPDQTLPFFTLGN*MSCLQS
Trigger: TGACTGTAAACAGCTCATCAAGTTGCCCAAGGTGAA...GAACGGCAAGGTCTGGTCCGGTCCCGGATTCGGGGCGCTGACATCGCCCAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424136.5
ENST00000455477.5
CDS-3UTR CAA 90 bp TGCTGCCCAGTTTCCAGTCTGTTCTGGTCCAGGGAAGCACCACCCCATGGCCCTTGGATGGAGGACTCCTaGGGGATGCTGAGTTCAGGG +
Preference number: 5 (lower is better)
Translates to: CCPVSSLFWSREAPPHGPWMEDS*GMLSSG
Trigger: CCCTGAACTCAGCATCCCCAAGGAGTCCTCCATCCA...AGGGCCATGGGGTGGTGCTTCCCTGGACCAGAACAGACTGGAAACTGGGCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CAA 90 bp GCTGCCCAGTTTCCAGTCTGTTCTGGTCCAGGGAAGCACCACCCCATGGCCCTTGTGGTTGCAGGCTGCTaGCTGCCCAGTTTCCAGTCT +
Preference number: 5 (lower is better)
Translates to: AAQFPVCSGPGKHHPMALVVAGC*LPSFQS
Trigger: AGACTGGAAACTGGGCAGCAAGCAGCCTGCAACCAC...AAGGGCCATGGGGTGGTGCTTCCCTGGACCAGAACAGACTGGAAACTGGGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CAA 90 bp TCCCAGTCCAGGATGTCTGAGGTGGTTGCAGGCTGCTTGCTGCCCAGTTTCCAGGGATGTCTGAGGTGGTaGCAGGCTGCTTGCTGCCCA +
Preference number: 5 (lower is better)
Translates to: SQSRMSEVVAGCLLPSFQGCLRW*QAACCP
Trigger: TGGGCAGCAAGCAGCCTGCAACCACCTCAGACATCC...CTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGACATCCTGGACTGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CAA 90 bp GCTGCCCAGTTTCCAGTCTGTTCTGGTCCAGGGAAGCACCACCCCATGGCCCTTCCAACGCGCCACTTTTaGGCATTCAGATACCGCCGC +
Preference number: 5 (lower is better)
Translates to: AAQFPVCSGPGKHHPMALPTRHF*AFRYRR
Trigger: GCGGCGGTATCTGAATGCCAAAAAGTGGCGCGTTGG...AAGGGCCATGGGGTGGTGCTTCCCTGGACCAGAACAGACTGGAAACTGGGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349752.10
ENST00000406653.5
CDS CCA 90 bp GGGGCGCCAGGGAACAAGGTGATGACTGACAGGCACAGCTCCTCCTaGAGGATCTGCTGGGTGTATGTGAAGGCCCATACCTGGGACTTT +
Preference number: 5 (lower is better)
Translates to: GAPGNKVMTDRHSSS*RICWVYVKAHTWDF
Trigger: AAAGTCCCAGGTATGGGCCTTCACATACACCCAGCAGATCCTCCAGGAGGAGCTGTGCCTGTCAGTCATCACCTTGTTCCCTGGCGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
ENST00000475320.5
CDS CCA 90 bp CCAACGCGCCACTTTTTGGCATTCAGATACCGCCGCTCATCAAACTaGTCCCACAGGTCGTCCCAGTCAGCGTCCGAAGGCTTAGGGGTC +
Preference number: 5 (lower is better)
Translates to: PTRHFLAFRYRRSSN*SHRSSQSASEGLGV
Trigger: GACCCCTAAGCCTTCGGACGCTGACTGGGACGACCTGTGGGACCAGTTTGATGAGCGGCGGTATCTGAATGCCAAAAAGTGGCGCGTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349752.10
ENST00000430167.1
CDS-3UTR CAA 90 bp TGCTGCCCAGTTTCCAGTCTGTTCTGGTCCAGGGAAGCACCACCCCATGGCCCTGAGGACTCACATGGGTaGACGACGATTTCCTTGCCG +
Preference number: 5 (lower is better)
Translates to: CCPVSSLFWSREAPPHGPEDSHG*TTISLP
Trigger: CGGCAAGGAAATCGTCGTCAACCCATGTGAGTCCTC...AGGGCCATGGGGTGGTGCTTCCCTGGACCAGAACAGACTGGAAACTGGGCAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CAA 90 bp CTCCCGCTGGTTGAAAGCATACAGCTTATAGGGGTCGTCACCAACGCGCCACTTTCCGGGATGGCCCGATaGCTGGAGATCCGCTCACTC +
Preference number: 5 (lower is better)
Translates to: LPLVESIQLIGVVTNAPLSGMAR*LEIRSL
Trigger: GAGTGAGCGGATCTCCAGCAATCGGGCCATCCCGGA...AAGTGGCGCGTTGGTGACGACCCCTATAAGCTGTATGCTTTCAACCAGCGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424136.5
ENST00000455477.5
CDS CCA 90 bp CCAACGCGCCACTTTTTGGCATTCAGATACCGCCGCTCATCAAACTaGTCCCACAGGTCGTCCCAGTCAGCGTCCGAAGGCTGTAGGAAG +
Preference number: 5 (lower is better)
Translates to: PTRHFLAFRYRRSSN*SHRSSQSASEGCRK
Trigger: CTTCCTACAGCCTTCGGACGCTGACTGGGACGACCTGTGGGACCAGTTTGATGAGCGGCGGTATCTGAATGCCAAAAAGTGGCGCGTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000455477.5
ENST00000461193.5
CDS CCA 90 bp CCAACGCGCCACTTTTTGGCATTCAGATACCGCCGCTCATCAAACTaGTCCCACAGGTCGTCCCAGTCAGCGTCCGAAGGCTGGGATAGT +
Preference number: 5 (lower is better)
Translates to: PTRHFLAFRYRRSSN*SHRSSQSASEGWDS
Trigger: ACTATCCCAGCCTTCGGACGCTGACTGGGACGACCTGTGGGACCAGTTTGATGAGCGGCGGTATCTGAATGCCAAAAAGTGGCGCGTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496397.5
CDS-3UTR CAA 90 bp CCGCCGCTCATCAAACTGGTCCCACAGGTCGTCCCAGTCAGCGTCCGAAGGCTAACCTCCAACTTCCTCTaGGTTACCCAGAAGAACAGC +
Preference number: 5 (lower is better)
Translates to: PPLIKLVPQVVPVSVRRLTSNFL*VTQKNS
Trigger: GCTGTTCTTCTGGGTAACCAAGAGGAAGTTGGAGGT...TAGCCTTCGGACGCTGACTGGGACGACCTGTGGGACCAGTTTGATGAGCGGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424136.5
CDS-3UTR CAA 90 bp CTCAGATGGCGAGTGTCCGGGATGGCCCGATTGCTGGAGATCCGCTCACTCTCCCGCAAGCATTTCACCTaGGGCAACTTGATGAGCTGT +
Preference number: 5 (lower is better)
Translates to: LRWRVSGMARLLEIRSLSRKHFT*GNLMSC
Trigger: ACAGCTCATCAAGTTGCCCAAGGTGAAATGCTTGCG...GGAGAGTGAGCGGATCTCCAGCAATCGGGCCATCCCGGACACTCGCCATCTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424136.5
ENST00000455477.5
CDS-3UTR CAA 90 bp GGATGTCTGAGGTGGTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGTTCTGGTGGATGGAGGACTCCTaGGGGATGCTGAGTTCAGGG +
Preference number: 5 (lower is better)
Translates to: GCLRWLQAACCPVSSLFWWMEDS*GMLSSG
Trigger: CCCTGAACTCAGCATCCCCAAGGAGTCCTCCATCCA...CCAGAACAGACTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGACATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CAA 90 bp TGCTGCCCAGTTTCCAGTCTGTTCTGGTCCAGGGAAGCACCACCCCATGGCCCTTGTCTCTGTCGGATATaGCCCTTCTGGATGGAGGAC +
Preference number: 5 (lower is better)
Translates to: CCPVSSLFWSREAPPHGPCLCRI*PFWMED
Trigger: GTCCTCCATCCAGAAGGGCAATATCCGACAGAGACA...AGGGCCATGGGGTGGTGCTTCCCTGGACCAGAACAGACTGGAAACTGGGCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CAA 90 bp TGCTGCCCAGTTTCCAGTCTGTTCTGGTCCAGGGAAGCACCACCCCATGGCCCTTTGACGACGATTTCCTaGCCGTTCTCGGTGCCATCA +
Preference number: 5 (lower is better)
Translates to: CCPVSSLFWSREAPPHGPLTTIS*PFSVPS
Trigger: TGATGGCACCGAGAACGGCAAGGAAATCGTCGTCAA...AGGGCCATGGGGTGGTGCTTCCCTGGACCAGAACAGACTGGAAACTGGGCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CAA 90 bp TCTCCAGATACCAATCAGGGAATGACTGGCCAGGACTGGAACTTAACGGCCTTGACCACCCCATGGCCCTaGCTGCTTCTGGCAGGGGTC +
Preference number: 5 (lower is better)
Translates to: SPDTNQGMTGQDWNLTALTTPWP*LLLAGV
Trigger: GACCCCTGCCAGAAGCAGCAAGGGCCATGGGGTGGT...CAAGGCCGTTAAGTTCCAGTCCTGGCCAGTCATTCCCTGATTGGTATCTGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS TCA 90 bp GCAAAGGACAAGAACCACTGGGGCGCCAGGGAACAAGGTGATGACTaGCAGGCACAGCTCCTCCTGGAGGATCTGCTGGGTGTATGTGAA +
Preference number: 5 (lower is better)
Translates to: AKDKNHWGAREQGDD*QAQLLLEDLLGVCE
Trigger: TTCACATACACCCAGCAGATCCTCCAGGAGGAGCTGTGCCTGTCAGTCATCACCTTGTTCCCTGGCGCCCCAGTGGTTCTTGTCCTTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
ENST00000475320.5
ENST00000486564.5
CDS TCA 90 bp CAGGGGTCCTCAAGAGCTCACCATGTCCCAGTGCTGGCTCATGAGTaGGGACTCACATGGGTTGACGACGATTTCCTTGCCGTTCTCGGT +
Preference number: 5 (lower is better)
Translates to: QGSSRAHHVPVLAHE*GLTWVDDDFLAVLG
Trigger: ACCGAGAACGGCAAGGAAATCGTCGTCAACCCATGTGAGTCCTCACTCATGAGCCAGCACTGGGACATGGTGAGCTCTTGAGGACCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
ENST00000475320.5
ENST00000486564.5
CDS CCA 90 bp GCTGCTTCTGGCAGGGGTCCTCAAGAGCTCACCATGTCCCAGTGCTaGCTCATGAGTGAGGACTCACATGGGTTGACGACGATTTCCTTG +
Preference number: 5 (lower is better)
Translates to: AASGRGPQELTMSQC*LMSEDSHGLTTISL
Trigger: CAAGGAAATCGTCGTCAACCCATGTGAGTCCTCACTCATGAGCCAGCACTGGGACATGGTGAGCTCTTGAGGACCCCTGCCAGAAGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
ENST00000475320.5
ENST00000486564.5
CDS CCA 90 bp CCAACGCGCCACTTTTTGGCATTCAGATACCGCCGCTCATCAAACTaGTCCCACAGGTCGTCCCAGTCAGCGTCCGAAGGCAGTATTGCA +
Preference number: 5 (lower is better)
Translates to: PTRHFLAFRYRRSSN*SHRSSQSASEGSIA
Trigger: TGCAATACTGCCTTCGGACGCTGACTGGGACGACCTGTGGGACCAGTTTGATGAGCGGCGGTATCTGAATGCCAAAAAGTGGCGCGTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464038.5
CDS CCA 90 bp TCTGTCGGATATTGCCCTTCTGGATGGAGGACTCCTTGGGGATGCTaGAGGAGAGTCACAGGGAGAGAGGAGAGTCCACTGAGTTCAGGG +
Preference number: 5 (lower is better)
Translates to: SVGYCPSGWRTPWGC*RRVTGREESPLSSG
Trigger: CCCTGAACTCAGTGGACTCTCCTCTCTCCCTGTGACTCTCCTCCAGCATCCCCAAGGAGTCCTCCATCCAGAAGGGCAATATCCGACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475320.5
CDS CCA 90 bp CCAACGCGCCACTTTTTGGCATTCAGATACCGCCGCTCATCAAACTaGTCCCACAGGTCGTCCCAGTCAGCGTCCGAAGGCTCACAAAGT +
Preference number: 5 (lower is better)
Translates to: PTRHFLAFRYRRSSN*SHRSSQSASEGSQS
Trigger: ACTTTGTGAGCCTTCGGACGCTGACTGGGACGACCTGTGGGACCAGTTTGATGAGCGGCGGTATCTGAATGCCAAAAAGTGGCGCGTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000490212.5
CDS-3UTR CAA 90 bp GGATGTCTGAGGTGGTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGTTCTGGGGACCGGACCAGACCTaGCCGTTCATTATTGCGCAA +
Preference number: 5 (lower is better)
Translates to: GCLRWLQAACCPVSSLFWGPDQT*PFIIAQ
Trigger: TTGCGCAATAATGAACGGCAAGGTCTGGTCCGGTCC...CCAGAACAGACTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGACATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CAA 90 bp AACATTCCCGAAGGGCCTCTCCAGGGCGAATGGCCGGGCAGCGTAATAGTATTGGGACCGGACCAGACCTaGCCGTTCATTATTGCGCAA +
Preference number: 5 (lower is better)
Translates to: NIPEGPLQGEWPGSVIVLGPDQT*PFIIAQ
Trigger: TTGCGCAATAATGAACGGCAAGGTCTGGTCCGGTCC...CAATACTATTACGCTGCCCGGCCATTCGCCCTGGAGAGGCCCTTCGGGAATGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455477.5
CDS-3UTR CAA 90 bp TCTGAGGTGGTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGTTCTGGTCCAGTTCTCCAGGTACCACTaGAAGCTCTGGCAGCGCAGA +
Preference number: 5 (lower is better)
Translates to: SEVVAGCLLPSFQSVLVQFSRYH*KLWQRR
Trigger: TCTGCGCTGCCAGAGCTTCAAGTGGTACCTGGAGAA...CTGGACCAGAACAGACTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CAA 90 bp AGTCCAGGATGTCTGAGGTGGTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGTTTGCATCTTCGCCTTaGACCTTGGCACAGGGGCTC +
Preference number: 5 (lower is better)
Translates to: SPGCLRWLQAACCPVSSLFASSP*TLAQGL
Trigger: GAGCCCCTGTGCCAAGGTCAAAGGCGAAGATGCAAA...CAGACTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGACATCCTGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CAA 90 bp AGATACCAATCAGGGAATGACTGGCCAGGACTGGAACTTAACGGCCTTGAGAACACCACCCCATGGCCCTaGCTGCTTCTGGCAGGGGTC +
Preference number: 5 (lower is better)
Translates to: RYQSGNDWPGLELNGLENTTPWP*LLLAGV
Trigger: GACCCCTGCCAGAAGCAGCAAGGGCCATGGGGTGGT...GTTCTCAAGGCCGTTAAGTTCCAGTCCTGGCCAGTCATTCCCTGATTGGTATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CAA 90 bp AGATACCAATCAGGGAATGACTGGCCAGGACTGGAACTTAACGGCCTTGAGAACAGACCCAGGATCCGGTaGGAGGGGCGGCAGGATCCT +
Preference number: 5 (lower is better)
Translates to: RYQSGNDWPGLELNGLENRPRIR*EGRQDP
Trigger: AGGATCCTGCCGCCCCTCCAACCGGATCCTGGGTCT...GTTCTCAAGGCCGTTAAGTTCCAGTCCTGGCCAGTCATTCCCTGATTGGTATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349752.10
CDS-3UTR CAA 90 bp CTCACAGTGGCTGTCGAGGAAAGTCAGAGTGGTGCCCTGGGCGATGTCAGCGCCACTTCCAAGCTGTCTTaGTTCAATCCTGGGTGTAGG +
Preference number: 5 (lower is better)
Translates to: LTVAVEESQSGALGDVSATSKLS*FNPGCR
Trigger: CCTACACCCAGGATTGAACAAAGACAGCTTGGAAGT...GGCGCTGACATCGCCCAGGGCACCACTCTGACTTTCCTCGACAGCCACTGTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424136.5
CDS-3UTR CAA 90 bp GCGATGTCAGCGCCCCGAATCCGGGACCGGACCAGACCTTGCCGTTCATTATTGGAAGGAGATTTCTCTTaGACCCTGTGCAACAGAGGC +
Preference number: 5 (lower is better)
Translates to: AMSAPRIRDRTRPCRSLLEGDFS*TLCNRG
Trigger: GCCTCTGTTGCACAGGGTCAAAGAGAAATCTCCTTC...CAATAATGAACGGCAAGGTCTGGTCCGGTCCCGGATTCGGGGCGCTGACATCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455477.5
CDS GCA 90 bp GTCTCTGTCGGATATTGCCCTTCTGGATGGAGGACTCCTTGGGGATaGTGGAGGAGAGTCACAGGGAGAGAGGAGAGTCCACTGAGTTCA +
Preference number: 5 (lower is better)
Translates to: VSVGYCPSGWRTPWG*WRRVTGREESPLSS
Trigger: TGAACTCAGTGGACTCTCCTCTCTCCCTGTGACTCTCCTCCAGCATCCCCAAGGAGTCCTCCATCCAGAAGGGCAATATCCGACAGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475320.5
CDS CCA 90 bp ACTTCTGTCTCTGTCGGATATTGCCCTTCTGGATGGAGGACTCCTTaGGGATGCTGGAGGAGAGTCACAGGGAGAGAGGAGAGTCCACTG +
Preference number: 5 (lower is better)
Translates to: TSVSVGYCPSGWRTP*GCWRRVTGREESPL
Trigger: CAGTGGACTCTCCTCTCTCCCTGTGACTCTCCTCCAGCATCCCCAAGGAGTCCTCCATCCAGAAGGGCAATATCCGACAGAGACAGAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475320.5
CDS CCA 90 bp GAGATTCCAGGCACTTCTGTCTCTGTCGGATATTGCCCTTCTGGATaGAGGACTCCTTGGGGATGCTGGAGGAGAGTCACAGGGAGAGAG +
Preference number: 5 (lower is better)
Translates to: EIPGTSVSVGYCPSG*RTPWGCWRRVTGRE
Trigger: CTCTCTCCCTGTGACTCTCCTCCAGCATCCCCAAGGAGTCCTCCATCCAGAAGGGCAATATCCGACAGAGACAGAAGTGCCTGGAATCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475320.5
CDS CCA 90 bp CCATTTTTGGACACGACTCATCTTGGGCCATGGCTGTTCCATGCCTaGGAGGGAGAGCAGGGGAGCTACAGTGGGCTGCTGAAATTGCAT +
Preference number: 5 (lower is better)
Translates to: PFLDTTHLGPWLFHA*EGEQGSYSGLLKLH
Trigger: ATGCAATTTCAGCAGCCCACTGTAGCTCCCCTGCTCTCCCTCCCAGGCATGGAACAGCCATGGCCCAAGATGAGTCGTGTCCAAAAATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485468.1
CDS-3UTR CAA 90 bp GTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGTTCTGGTCCAGGGAAGCACCACCTCCAACTTCCTCTaGGTTACCCAGAAGAACAGC +
Preference number: 5 (lower is better)
Translates to: VAGCLLPSFQSVLVQGSTTSNFL*VTQKNS
Trigger: GCTGTTCTTCTGGGTAACCAAGAGGAAGTTGGAGGT...GGTGCTTCCCTGGACCAGAACAGACTGGAAACTGGGCAGCAAGCAGCCTGCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324589.9
ENST00000349752.10
CDS-3UTR CAA 90 bp TCCCAGTCCAGGATGTCTGAGGTGGTTGCAGGCTGCTTGCTGCCCAGTTTCCAGCGCAAGCATTTCACCTaGGGCAACTTGATGAGCTGT +
Preference number: 5 (lower is better)
Translates to: SQSRMSEVVAGCLLPSFQRKHFT*GNLMSC
Trigger: ACAGCTCATCAAGTTGCCCAAGGTGAAATGCTTGCG...CTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGACATCCTGGACTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CAA 90 bp TGCTGCCCAGTTTCCAGTCTGTTCTGGTCCAGGGAAGCACCACCCCATGGCCCTCCTTGCCGTTCATTATaGCGCAAGCATTTCACCTTG +
Preference number: 5 (lower is better)
Translates to: CCPVSSLFWSREAPPHGPPCRSL*RKHFTL
Trigger: CAAGGTGAAATGCTTGCGCAATAATGAACGGCAAGG...AGGGCCATGGGGTGGTGCTTCCCTGGACCAGAACAGACTGGAAACTGGGCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CAA 90 bp GCTGCCCAGTTTCCAGTCTGTTCTGGTCCAGGGAAGCACCACCCCATGGCCCTTTTGGTTGTTCTGCCTTaGAGATTCCAGGCACTTCTG +
Preference number: 5 (lower is better)
Translates to: AAQFPVCSGPGKHHPMALLVVLP*RFQALL
Trigger: CAGAAGTGCCTGGAATCTCAAAGGCAGAACAACCAA...AAGGGCCATGGGGTGGTGCTTCCCTGGACCAGAACAGACTGGAAACTGGGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CAA 90 bp TGCTGCCCAGTTTCCAGTCTGTTCTGGTCCAGGGAAGCACCACCCCATGGCCCTACCAGTTTTGGTCCATaGCTGTCGGTCATCTCCATT +
Preference number: 5 (lower is better)
Translates to: CCPVSSLFWSREAPPHGPTSFGP*LSVISI
Trigger: AATGGAGATGACCGACAGCAATGGACCAAAACTGGT...AGGGCCATGGGGTGGTGCTTCCCTGGACCAGAACAGACTGGAAACTGGGCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CAA 90 bp AGGATGTCTGAGGTGGTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGTTCTGGAGGACTCACATGGGTaGACGACGATTTCCTTGCCG +
Preference number: 5 (lower is better)
Translates to: RMSEVVAGCLLPSFQSVLEDSHG*TTISLP
Trigger: CGGCAAGGAAATCGTCGTCAACCCATGTGAGTCCTC...CAGAACAGACTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGACATCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CAA 90 bp CAATCAGGGAATGACTGGCCAGGACTGGAACTTAACGGCCTTGAGAACATGTGGGGATGTCTGAGGTGGTaGCAGGCTGCTTGCTGCCCA +
Preference number: 5 (lower is better)
Translates to: QSGNDWPGLELNGLENMWGCLRW*QAACCP
Trigger: TGGGCAGCAAGCAGCCTGCAACCACCTCAGACATCC...CCACATGTTCTCAAGGCCGTTAAGTTCCAGTCCTGGCCAGTCATTCCCTGATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CAA 90 bp TCCCAGTCCAGGATGTCTGAGGTGGTTGCAGGCTGCTTGCTGCCCAGTTTCCAGGAGAACATGTGGGATTaGTCTTTGAGCCCCATTGGC +
Preference number: 5 (lower is better)
Translates to: SQSRMSEVVAGCLLPSFQENMWD*SLSPIG
Trigger: GCCAATGGGGCTCAAAGACAAATCCCACATGTTCTC...CTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGACATCCTGGACTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CAA 90 bp GGATGTCTGAGGTGGTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGTTCTGGACCTCCAACTTCCTCTaGGTTACCCAGAAGAACAGC +
Preference number: 5 (lower is better)
Translates to: GCLRWLQAACCPVSSLFWTSNFL*VTQKNS
Trigger: GCTGTTCTTCTGGGTAACCAAGAGGAAGTTGGAGGT...CCAGAACAGACTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGACATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324589.9
ENST00000349752.10
CDS-3UTR CAA 90 bp GCTGCCCAGTTTCCAGTCTGTTCTGGTCCAGGGAAGCACCACCCCATGGCCCTTCAGTCATCAGGGTCATaGCTGAAGTCATCCACTAAT +
Preference number: 5 (lower is better)
Translates to: AAQFPVCSGPGKHHPMALQSSGS*LKSSTN
Trigger: ATTAGTGGATGACTTCAGCAATGACCCTGATGACTG...AAGGGCCATGGGGTGGTGCTTCCCTGGACCAGAACAGACTGGAAACTGGGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CAA 90 bp TGCTGCCCAGTTTCCAGTCTGTTCTGGTCCAGGGAAGCACCACCCCATGGCCCTTTCACCTTGGGCAACTaGATGAGCTGTTTACAGTCA +
Preference number: 5 (lower is better)
Translates to: CCPVSSLFWSREAPPHGPFTLGN*MSCLQS
Trigger: TGACTGTAAACAGCTCATCAAGTTGCCCAAGGTGAA...AGGGCCATGGGGTGGTGCTTCCCTGGACCAGAACAGACTGGAAACTGGGCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CAA 90 bp CAGTGTGCATCTCAGATGGCGAGTGTCCGGGATGGCCCGATTGCTGGAGATCCGTTCACCTTGGGCAACTaGATGAGCTGTTTACAGTCA +
Preference number: 5 (lower is better)
Translates to: QCASQMASVRDGPIAGDPFTLGN*MSCLQS
Trigger: TGACTGTAAACAGCTCATCAAGTTGCCCAAGGTGAA...CGGATCTCCAGCAATCGGGCCATCCCGGACACTCGCCATCTGAGATGCACACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424136.5
ENST00000455477.5
CDS-3UTR CAA 90 bp AGTCCAGGATGTCTGAGGTGGTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGCGCAAGCATTTCACCTaGGGCAACTTGATGAGCTGT +
Preference number: 5 (lower is better)
Translates to: SPGCLRWLQAACCPVSSLRKHFT*GNLMSC
Trigger: ACAGCTCATCAAGTTGCCCAAGGTGAAATGCTTGCG...CAGACTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGACATCCTGGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CAA 90 bp TCCAGGATGTCTGAGGTGGTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGTTTGTCTCTGTCGGATATaGCCCTTCTGGATGGAGGAC +
Preference number: 5 (lower is better)
Translates to: SRMSEVVAGCLLPSFQSVCLCRI*PFWMED
Trigger: GTCCTCCATCCAGAAGGGCAATATCCGACAGAGACA...AACAGACTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGACATCCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CAA 90 bp GTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGTTCTGGTCCAGGGAAGCACCCGGTCATCTCCATTCTaGCAAAGGACAAGAACCACT +
Preference number: 5 (lower is better)
Translates to: VAGCLLPSFQSVLVQGSTRSSPF*QRTRTT
Trigger: AGTGGTTCTTGTCCTTTGCAAGAATGGAGATGACCG...GGTGCTTCCCTGGACCAGAACAGACTGGAAACTGGGCAGCAAGCAGCCTGCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CAA 90 bp GTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGTTCTGGTCCAGGGAAGCACCACCAGTTTTGGTCCATaGCTGTCGGTCATCTCCATT +
Preference number: 5 (lower is better)
Translates to: VAGCLLPSFQSVLVQGSTTSFGP*LSVISI
Trigger: AATGGAGATGACCGACAGCAATGGACCAAAACTGGT...GGTGCTTCCCTGGACCAGAACAGACTGGAAACTGGGCAGCAAGCAGCCTGCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CAA 90 bp TCCCAGTCCAGGATGTCTGAGGTGGTTGCAGGCTGCTTGCTGCCCAGTTTCCAGACCAGTTTTGGTCCATaGCTGTCGGTCATCTCCATT +
Preference number: 5 (lower is better)
Translates to: SQSRMSEVVAGCLLPSFQTSFGP*LSVISI
Trigger: AATGGAGATGACCGACAGCAATGGACCAAAACTGGT...CTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGACATCCTGGACTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CAA 90 bp CAATCAGGGAATGACTGGCCAGGACTGGAACTTAACGGCCTTGAGAACATGTGGGTGGTTGCAGGCTGCTaGCTGCCCAGTTTCCAGTCT +
Preference number: 5 (lower is better)
Translates to: QSGNDWPGLELNGLENMWVVAGC*LPSFQS
Trigger: AGACTGGAAACTGGGCAGCAAGCAGCCTGCAACCAC...CCACATGTTCTCAAGGCCGTTAAGTTCCAGTCCTGGCCAGTCATTCCCTGATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS GCA 90 bp CTCGGTGCCATCACCGAACATATCTGTATCGAGGCAGAGGTGGGATaGTATGTGCTCGATGTGGGAACCAGTTTTGGTCCATTGCTGTCG +
Preference number: 5 (lower is better)
Translates to: LGAITEHICIEAEVG*YVLDVGTSFGPLLS
Trigger: CGACAGCAATGGACCAAAACTGGTTCCCACATCGAGCACATAGCATCCCACCTCTGCCTCGATACAGATATGTTCGGTGATGGCACCGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
ENST00000475320.5
ENST00000486564.5
CDS GCA 90 bp TGTTCTGCCTTTGAGATTCCAGGCACTTCTGTCTCTGTCGGATATTaGCCTTCTGGATGGAGGACTCCTTGGGGATGCTGGAGGAGAGTC +
Preference number: 5 (lower is better)
Translates to: CSAFEIPGTSVSVGY*PSGWRTPWGCWRRV
Trigger: GACTCTCCTCCAGCATCCCCAAGGAGTCCTCCATCCAGAAGGGCAATATCCGACAGAGACAGAAGTGCCTGGAATCTCAAAGGCAGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475320.5
CDS GCA 90 bp GGGCTACTATACCAGCCAAAGTCCTACTCGCAGTTCCCATTGTCCTaGATGCCCCTCCACTCTACGACCCATCATCTTCCTATGATCCAG +
Preference number: 5 (lower is better)
Translates to: GLLYQPKSYSQFPLS*MPLHSTTHHLPMIQ
Trigger: CTGGATCATAGGAAGATGATGGGTCGTAGAGTGGAGGGGCATGCAGGACAATGGGAACTGCGAGTAGGACTTTGGCTGGTATAGTAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498206.5
CDS CCA 90 bp CCGTTCTCGGTGCCATCACCGAACATATCTGTATCGAGGCAGAGGTaGGATGCTATGTGCTCGATGTGGGAACCAGTTTTGGTCCATTGC +
Preference number: 5 (lower is better)
Translates to: PFSVPSPNISVSRQR*DAMCSMWEPVLVHC
Trigger: GCAATGGACCAAAACTGGTTCCCACATCGAGCACATAGCATCCCACCTCTGCCTCGATACAGATATGTTCGGTGATGGCACCGAGAACGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
ENST00000475320.5
ENST00000486564.5
CDS-3UTR CAA 90 bp GGATGTCTGAGGTGGTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGTTCTGGCCTTGCCGTTCATTATaGCGCAAGCATTTCACCTTG +
Preference number: 5 (lower is better)
Translates to: GCLRWLQAACCPVSSLFWPCRSL*RKHFTL
Trigger: CAAGGTGAAATGCTTGCGCAATAATGAACGGCAAGG...CCAGAACAGACTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGACATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CAA 90 bp AGATGGCGAGTGTCCGGGATGGCCCGATTGCTGGAGATCCGCTCACTCTCCCGCTTCTTTATATACGTGTaGGCATTTCCATCAGGGAAA +
Preference number: 5 (lower is better)
Translates to: RWRVSGMARLLEIRSLSRFFIYV*AFPSGK
Trigger: TTTCCCTGATGGAAATGCCAACACGTATATAAAGAA...GCGGGAGAGTGAGCGGATCTCCAGCAATCGGGCCATCCCGGACACTCGCCATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455477.5
CDS-3UTR CAA 90 bp GTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGTTCTGGTCCAGGGAAGCACCGGCTCAACTTTAGGTTaGGGGTTTCTTGGTTGTTCT +
Preference number: 5 (lower is better)
Translates to: VAGCLLPSFQSVLVQGSTGSTLG*GFLGCS
Trigger: AGAACAACCAAGAAACCCCAAACCTAAAGTTGAGCC...GGTGCTTCCCTGGACCAGAACAGACTGGAAACTGGGCAGCAAGCAGCCTGCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CAA 90 bp TCCAGGATGTCTGAGGTGGTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGTTGAGAACATGTGGGATTaGTCTTTGAGCCCCATTGGC +
Preference number: 5 (lower is better)
Translates to: SRMSEVVAGCLLPSFQSVENMWD*SLSPIG
Trigger: GCCAATGGGGCTCAAAGACAAATCCCACATGTTCTC...AACAGACTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGACATCCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CAA 90 bp GTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGTTCTGGTCCAGGGAAGCACCTGGAACTTAACGGCCTaGAGAACATGTGGGATTTGT +
Preference number: 5 (lower is better)
Translates to: VAGCLLPSFQSVLVQGSTWNLTA*RTCGIC
Trigger: ACAAATCCCACATGTTCTCAAGGCCGTTAAGTTCCA...GGTGCTTCCCTGGACCAGAACAGACTGGAAACTGGGCAGCAAGCAGCCTGCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CAA 90 bp GACTGGCCAGGACTGGAACTTAACGGCCTTGAGAACATGTGGGATTTGTCTTTGCCAACGCGCCACTTTTaGGCATTCAGATACCGCCGC +
Preference number: 5 (lower is better)
Translates to: DWPGLELNGLENMWDLSLPTRHF*AFRYRR
Trigger: GCGGCGGTATCTGAATGCCAAAAAGTGGCGCGTTGG...CAAAGACAAATCCCACATGTTCTCAAGGCCGTTAAGTTCCAGTCCTGGCCAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349752.10
ENST00000406653.5
CDS TCA 90 bp GATGGTGGAAAAAGCACTCCTGTGGGTCTGTCCCAGTCCCTCCACTaGTGGAACAGTGATGTGAACTTGGACAAGTCAGTAGCGCTCTCA +
Preference number: 5 (lower is better)
Translates to: DGGKSTPVGLSQSLH*WNSDVNLDKSVALS
Trigger: TGAGAGCGCTACTGACTTGTCCAAGTTCACATCACTGTTCCATCAGTGGAGGGACTGGGACAGACCCACAGGAGTGCTTTTTCCACCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485468.1
CDS CCA 90 bp GATGTGAACTTGGACAAGTCAGTAGCGCTCTCAGAGATCCATTTTTaGACACGACTCATCTTGGGCCATGGCTGTTCCATGCCTGGGAGG +
Preference number: 5 (lower is better)
Translates to: DVNLDKSVALSEIHF*TRLILGHGCSMPGR
Trigger: CCTCCCAGGCATGGAACAGCCATGGCCCAAGATGAGTCGTGTCCAAAAATGGATCTCTGAGAGCGCTACTGACTTGTCCAAGTTCACATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485468.1
CDS-3UTR CAA 90 bp AGTCCAGGATGTCTGAGGTGGTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGTTCACCTTGGGCAACTaGATGAGCTGTTTACAGTCA +
Preference number: 5 (lower is better)
Translates to: SPGCLRWLQAACCPVSSLFTLGN*MSCLQS
Trigger: TGACTGTAAACAGCTCATCAAGTTGCCCAAGGTGAA...CAGACTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGACATCCTGGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CAA 90 bp AGGGGTCGTCACCAACGCGCCACTTTTTGGCATTCAGATACCGCCGCTCATCAACCTTGCCGTTCATTATaGCGCAAGCATTTCACCTTG +
Preference number: 5 (lower is better)
Translates to: RGRHQRATFWHSDTAAHQPCRSL*RKHFTL
Trigger: CAAGGTGAAATGCTTGCGCAATAATGAACGGCAAGG...TTGATGAGCGGCGGTATCTGAATGCCAAAAAGTGGCGCGTTGGTGACGACCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424136.5
ENST00000455477.5
CDS-3UTR CAA 90 bp GACTGGCCAGGACTGGAACTTAACGGCCTTGAGAACATGTGGGATTTGTCTTTGGGACCGGACCAGACCTaGCCGTTCATTATTGCGCAA +
Preference number: 5 (lower is better)
Translates to: DWPGLELNGLENMWDLSLGPDQT*PFIIAQ
Trigger: TTGCGCAATAATGAACGGCAAGGTCTGGTCCGGTCC...CAAAGACAAATCCCACATGTTCTCAAGGCCGTTAAGTTCCAGTCCTGGCCAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CAA 90 bp AGATACCAATCAGGGAATGACTGGCCAGGACTGGAACTTAACGGCCTTGAGAACGGACCGGACCAGACCTaGCCGTTCATTATTGCGCAA +
Preference number: 5 (lower is better)
Translates to: RYQSGNDWPGLELNGLENGPDQT*PFIIAQ
Trigger: TTGCGCAATAATGAACGGCAAGGTCTGGTCCGGTCC...GTTCTCAAGGCCGTTAAGTTCCAGTCCTGGCCAGTCATTCCCTGATTGGTATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CAA 90 bp TCTGAGGTGGTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGTTCTGGTCCAGACTTCAGCTGTCCGCTaGGTGTTCTTTATATACGTG +
Preference number: 5 (lower is better)
Translates to: SEVVAGCLLPSFQSVLVQTSAVR*VFFIYV
Trigger: CACGTATATAAAGAACACCAAGCGGACAGCTGAAGT...CTGGACCAGAACAGACTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CAA 90 bp AGATACCAATCAGGGAATGACTGGCCAGGACTGGAACTTAACGGCCTTGAGAACTTCTCCAGGTACCACTaGAAGCTCTGGCAGCGCAGA +
Preference number: 5 (lower is better)
Translates to: RYQSGNDWPGLELNGLENFSRYH*KLWQRR
Trigger: TCTGCGCTGCCAGAGCTTCAAGTGGTACCTGGAGAA...GTTCTCAAGGCCGTTAAGTTCCAGTCCTGGCCAGTCATTCCCTGATTGGTATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CAA 90 bp CAATCAGGGAATGACTGGCCAGGACTGGAACTTAACGGCCTTGAGAACATGTGGTGTCTCTGTCGGATATaGCCCTTCTGGATGGAGGAC +
Preference number: 5 (lower is better)
Translates to: QSGNDWPGLELNGLENMWCLCRI*PFWMED
Trigger: GTCCTCCATCCAGAAGGGCAATATCCGACAGAGACA...CCACATGTTCTCAAGGCCGTTAAGTTCCAGTCCTGGCCAGTCATTCCCTGATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CAA 90 bp TCCAGGATGTCTGAGGTGGTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGTTTTGGTTGTTCTGCCTTaGAGATTCCAGGCACTTCTG +
Preference number: 5 (lower is better)
Translates to: SRMSEVVAGCLLPSFQSVLVVLP*RFQALL
Trigger: CAGAAGTGCCTGGAATCTCAAAGGCAGAACAACCAA...AACAGACTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGACATCCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CAA 90 bp AGGATGTCTGAGGTGGTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGTTCTGTTGGTTGTTCTGCCTTaGAGATTCCAGGCACTTCTG +
Preference number: 5 (lower is better)
Translates to: RMSEVVAGCLLPSFQSVLLVVLP*RFQALL
Trigger: CAGAAGTGCCTGGAATCTCAAAGGCAGAACAACCAA...CAGAACAGACTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGACATCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CAA 90 bp TCCTGGCCTAGTGAAAAAGAAGGCTTTTCTTTCTGGCCTCCAGAGACTGCTTCCTTTGCATCTTCGCCTTaGACCTTGGCACAGGGGCTC +
Preference number: 5 (lower is better)
Translates to: SWPSEKEGFSFWPPETASFASSP*TLAQGL
Trigger: GAGCCCCTGTGCCAAGGTCAAAGGCGAAGATGCAAA...GGAAGCAGTCTCTGGAGGCCAGAAAGAAAAGCCTTCTTTTTCACTAGGCCAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CAA 90 bp TCTCCAGATACCAATCAGGGAATGACTGGCCAGGACTGGAACTTAACGGCCTTGTTGACGACGATTTCCTaGCCGTTCTCGGTGCCATCA +
Preference number: 5 (lower is better)
Translates to: SPDTNQGMTGQDWNLTALLTTIS*PFSVPS
Trigger: TGATGGCACCGAGAACGGCAAGGAAATCGTCGTCAA...CAAGGCCGTTAAGTTCCAGTCCTGGCCAGTCATTCCCTGATTGGTATCTGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CAA 90 bp TCCTGGCCTAGTGAAAAAGAAGGCTTTTCTTTCTGGCCTCCAGAGACTGCTTCCGAGGACTCACATGGGTaGACGACGATTTCCTTGCCG +
Preference number: 5 (lower is better)
Translates to: SWPSEKEGFSFWPPETASEDSHG*TTISLP
Trigger: CGGCAAGGAAATCGTCGTCAACCCATGTGAGTCCTC...GGAAGCAGTCTCTGGAGGCCAGAAAGAAAAGCCTTCTTTTTCACTAGGCCAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CAA 90 bp ATGACTGGCCAGGACTGGAACTTAACGGCCTTGAGAACATGTGGGATTTGTCTTGTGGTTGCAGGCTGCTaGCTGCCCAGTTTCCAGTCT +
Preference number: 5 (lower is better)
Translates to: MTGQDWNLTALRTCGICLVVAGC*LPSFQS
Trigger: AGACTGGAAACTGGGCAGCAAGCAGCCTGCAACCAC...AAGACAAATCCCACATGTTCTCAAGGCCGTTAAGTTCCAGTCCTGGCCAGTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CAA 90 bp AGTCCAGGATGTCTGAGGTGGTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGTGGAACTTAACGGCCTaGAGAACATGTGGGATTTGT +
Preference number: 5 (lower is better)
Translates to: SPGCLRWLQAACCPVSSLWNLTA*RTCGIC
Trigger: ACAAATCCCACATGTTCTCAAGGCCGTTAAGTTCCA...CAGACTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGACATCCTGGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CAA 90 bp ACCTTGCCGTTCATTATTGCGCAAGCATTTCACCTTGGGCAACTTGATGAGCTGCCAACGCGCCACTTTTaGGCATTCAGATACCGCCGC +
Preference number: 5 (lower is better)
Translates to: TLPFIIAQAFHLGQLDELPTRHF*AFRYRR
Trigger: GCGGCGGTATCTGAATGCCAAAAAGTGGCGCGTTGG...CAGCTCATCAAGTTGCCCAAGGTGAAATGCTTGCGCAATAATGAACGGCAAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424136.5
ENST00000455477.5
CDS TCA 90 bp TCATCAAACTGGTCCCACAGGTCGTCCCAGTCAGCGTCCGAAGGCTaGCTTGAAGAAAGACCTGAGTCTGCAAATGGAACTGAGCTTCTT +
Preference number: 5 (lower is better)
Translates to: SSNWSHRSSQSASEG*LEERPESANGTELL
Trigger: AAGAAGCTCAGTTCCATTTGCAGACTCAGGTCTTTCTTCAAGTCAGCCTTCGGACGCTGACTGGGACGACCTGTGGGACCAGTTTGATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406653.5
ENST00000498206.5
CDS TCA 90 bp AAGCACTCCTGTGGGTCTGTCCCAGTCCCTCCACTGATGGAACAGTaGTGTGAACTTGGACAAGTCAGTAGCGCTCTCAGAGATCCATTT +
Preference number: 5 (lower is better)
Translates to: KHSCGSVPVPPLMEQ*CELGQVSSALRDPF
Trigger: AAATGGATCTCTGAGAGCGCTACTGACTTGTCCAAGTTCACATCACTGTTCCATCAGTGGAGGGACTGGGACAGACCCACAGGAGTGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485468.1
CDS GCA 90 bp CCATCACCGAACATATCTGTATCGAGGCAGAGGTGGGATGCTATGTaGTCGATGTGGGAACCAGTTTTGGTCCATTGCTGTCGGTCATCT +
Preference number: 5 (lower is better)
Translates to: PSPNISVSRQRWDAM*SMWEPVLVHCCRSS
Trigger: AGATGACCGACAGCAATGGACCAAAACTGGTTCCCACATCGAGCACATAGCATCCCACCTCTGCCTCGATACAGATATGTTCGGTGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
ENST00000475320.5
ENST00000486564.5
CDS-3UTR CAA 90 bp AGGATGTCTGAGGTGGTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGTTCTGATGGAACTGAGCTTCTaGCAAGAGACATGGGAAATG +
Preference number: 5 (lower is better)
Translates to: RMSEVVAGCLLPSFQSVLMELSF*QETWEM
Trigger: CATTTCCCATGTCTCTTGCAAGAAGCTCAGTTCCAT...CAGAACAGACTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGACATCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324589.9
ENST00000406653.5
CDS-3UTR CAA 90 bp TCCAGGATGTCTGAGGTGGTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGTTTTCACCTTGGGCAACTaGATGAGCTGTTTACAGTCA +
Preference number: 5 (lower is better)
Translates to: SRMSEVVAGCLLPSFQSVFTLGN*MSCLQS
Trigger: TGACTGTAAACAGCTCATCAAGTTGCCCAAGGTGAA...AACAGACTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGACATCCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CAA 90 bp GATGATGCTAGTGGGTGGAAGGTCCGTGCAATACACCAGCAGTGTGCATCTCAGCCTTGCCGTTCATTATaGCGCAAGCATTTCACCTTG +
Preference number: 5 (lower is better)
Translates to: DDASGWKVRAIHQQCASQPCRSL*RKHFTL
Trigger: CAAGGTGAAATGCTTGCGCAATAATGAACGGCAAGG...CTGAGATGCACACTGCTGGTGTATTGCACGGACCTTCCACCCACTAGCATCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424136.5
ENST00000455477.5
CDS-3UTR CAA 90 bp CTCACTCTCCCGCTGGTTGAAAGCATACAGCTTATAGGGGTCGTCACCAACGCGACTTCAGCTGTCCGCTaGGTGTTCTTTATATACGTG +
Preference number: 5 (lower is better)
Translates to: LTLPLVESIQLIGVVTNATSAVR*VFFIYV
Trigger: CACGTATATAAAGAACACCAAGCGGACAGCTGAAGT...CGCGTTGGTGACGACCCCTATAAGCTGTATGCTTTCAACCAGCGGGAGAGTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455477.5
CDS-3UTR CAA 90 bp ATGACTGGCCAGGACTGGAACTTAACGGCCTTGAGAACATGTGGGATTTGTCTTTTCTCCAGGTACCACTaGAAGCTCTGGCAGCGCAGA +
Preference number: 5 (lower is better)
Translates to: MTGQDWNLTALRTCGICLFSRYH*KLWQRR
Trigger: TCTGCGCTGCCAGAGCTTCAAGTGGTACCTGGAGAA...AAGACAAATCCCACATGTTCTCAAGGCCGTTAAGTTCCAGTCCTGGCCAGTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CAA 90 bp TCCTGGCCTAGTGAAAAAGAAGGCTTTTCTTTCTGGCCTCCAGAGACTGCTTCCTCTTCGCCTTTGACCTaGGCACAGGGGCTCAACTTT +
Preference number: 5 (lower is better)
Translates to: SWPSEKEGFSFWPPETASSSPLT*AQGLNF
Trigger: AAAGTTGAGCCCCTGTGCCAAGGTCAAAGGCGAAGA...GGAAGCAGTCTCTGGAGGCCAGAAAGAAAAGCCTTCTTTTTCACTAGGCCAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CAA 90 bp AGATACCAATCAGGGAATGACTGGCCAGGACTGGAACTTAACGGCCTTGAGAACTCTTCGCCTTTGACCTaGGCACAGGGGCTCAACTTT +
Preference number: 5 (lower is better)
Translates to: RYQSGNDWPGLELNGLENSSPLT*AQGLNF
Trigger: AAAGTTGAGCCCCTGTGCCAAGGTCAAAGGCGAAGA...GTTCTCAAGGCCGTTAAGTTCCAGTCCTGGCCAGTCATTCCCTGATTGGTATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CAA 90 bp ATGACTGGCCAGGACTGGAACTTAACGGCCTTGAGAACATGTGGGATTTGTCTTTTTGCATCTTCGCCTTaGACCTTGGCACAGGGGCTC +
Preference number: 5 (lower is better)
Translates to: MTGQDWNLTALRTCGICLFASSP*TLAQGL
Trigger: GAGCCCCTGTGCCAAGGTCAAAGGCGAAGATGCAAA...AAGACAAATCCCACATGTTCTCAAGGCCGTTAAGTTCCAGTCCTGGCCAGTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CAA 90 bp CAATCAGGGAATGACTGGCCAGGACTGGAACTTAACGGCCTTGAGAACATGTGGATGTGGGAACCAGTTTaGGTCCATTGCTGTCGGTCA +
Preference number: 5 (lower is better)
Translates to: QSGNDWPGLELNGLENMWMWEPV*VHCCRS
Trigger: TGACCGACAGCAATGGACCAAAACTGGTTCCCACAT...CCACATGTTCTCAAGGCCGTTAAGTTCCAGTCCTGGCCAGTCATTCCCTGATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CAA 90 bp GACTGGCCAGGACTGGAACTTAACGGCCTTGAGAACATGTGGGATTTGTCTTTGTTGACGACGATTTCCTaGCCGTTCTCGGTGCCATCA +
Preference number: 5 (lower is better)
Translates to: DWPGLELNGLENMWDLSLLTTIS*PFSVPS
Trigger: TGATGGCACCGAGAACGGCAAGGAAATCGTCGTCAA...CAAAGACAAATCCCACATGTTCTCAAGGCCGTTAAGTTCCAGTCCTGGCCAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CAA 90 bp GCATTTCACCTTGGGCAACTTGATGAGCTGTTTACAGTCATCAGGGTCATTGCTCCAACGCGCCACTTTTaGGCATTCAGATACCGCCGC +
Preference number: 5 (lower is better)
Translates to: AFHLGQLDELFTVIRVIAPTRHF*AFRYRR
Trigger: GCGGCGGTATCTGAATGCCAAAAAGTGGCGCGTTGG...AGCAATGACCCTGATGACTGTAAACAGCTCATCAAGTTGCCCAAGGTGAAATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424136.5
ENST00000455477.5
CDS-3UTR CAA 90 bp TATAGGGGTCGTCACCAACGCGCCACTTTTTGGCATTCAGATACCGCCGCTCATCAGTCATCAGGGTCATaGCTGAAGTCATCCACTAAT +
Preference number: 5 (lower is better)
Translates to: YRGRHQRATFWHSDTAAHQSSGS*LKSSTN
Trigger: ATTAGTGGATGACTTCAGCAATGACCCTGATGACTG...ATGAGCGGCGGTATCTGAATGCCAAAAAGTGGCGCGTTGGTGACGACCCCTATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424136.5
ENST00000455477.5
CDS-3UTR CAA 90 bp CCTGGCCTAGTGAAAAAGAAGGCTTTTCTTTCTGGCCTCCAGAGACTGCTTCCTCGCAAGCATTTCACCTaGGGCAACTTGATGAGCTGT +
Preference number: 5 (lower is better)
Translates to: PGLVKKKAFLSGLQRLLPRKHFT*GNLMSC
Trigger: ACAGCTCATCAAGTTGCCCAAGGTGAAATGCTTGCG...AGGAAGCAGTCTCTGGAGGCCAGAAAGAAAAGCCTTCTTTTTCACTAGGCCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CAA 90 bp CAATCAGGGAATGACTGGCCAGGACTGGAACTTAACGGCCTTGAGAACATGTGGCCTTGCCGTTCATTATaGCGCAAGCATTTCACCTTG +
Preference number: 5 (lower is better)
Translates to: QSGNDWPGLELNGLENMWPCRSL*RKHFTL
Trigger: CAAGGTGAAATGCTTGCGCAATAATGAACGGCAAGG...CCACATGTTCTCAAGGCCGTTAAGTTCCAGTCCTGGCCAGTCATTCCCTGATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CAA 90 bp CCTGGCCTAGTGAAAAAGAAGGCTTTTCTTTCTGGCCTCCAGAGACTGCTTCCTATGTGGGAACCAGTTTaGGTCCATTGCTGTCGGTCA +
Preference number: 5 (lower is better)
Translates to: PGLVKKKAFLSGLQRLLPMWEPV*VHCCRS
Trigger: TGACCGACAGCAATGGACCAAAACTGGTTCCCACAT...AGGAAGCAGTCTCTGGAGGCCAGAAAGAAAAGCCTTCTTTTTCACTAGGCCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS CCA 90 bp AACATATCTGTATCGAGGCAGAGGTGGGATGCTATGTGCTCGATGTaGGAACCAGTTTTGGTCCATTGCTGTCGGTCATCTCCATTCTTG +
Preference number: 5 (lower is better)
Translates to: NISVSRQRWDAMCSM*EPVLVHCCRSSPFL
Trigger: CAAGAATGGAGATGACCGACAGCAATGGACCAAAACTGGTTCCCACATCGAGCACATAGCATCCCACCTCTGCCTCGATACAGATATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
ENST00000475320.5
ENST00000486564.5
CDS-3UTR CAA 90 bp TCTGAGGTGGTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGTTCTGGTCCAGTTCTTTATATACGTGTaGGCATTTCCATCAGGGAAA +
Preference number: 5 (lower is better)
Translates to: SEVVAGCLLPSFQSVLVQFFIYV*AFPSGK
Trigger: TTTCCCTGATGGAAATGCCAACACGTATATAAAGAA...CTGGACCAGAACAGACTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CAA 90 bp GGATGTCTGAGGTGGTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGTTCTGGTTCTTTATATACGTGTaGGCATTTCCATCAGGGAAA +
Preference number: 5 (lower is better)
Translates to: GCLRWLQAACCPVSSLFWFFIYV*AFPSGK
Trigger: TTTCCCTGATGGAAATGCCAACACGTATATAAAGAA...CCAGAACAGACTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGACATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CAA 90 bp AGATACCAATCAGGGAATGACTGGCCAGGACTGGAACTTAACGGCCTTGAGAACCGGTCATCTCCATTCTaGCAAAGGACAAGAACCACT +
Preference number: 5 (lower is better)
Translates to: RYQSGNDWPGLELNGLENRSSPF*QRTRTT
Trigger: AGTGGTTCTTGTCCTTTGCAAGAATGGAGATGACCG...GTTCTCAAGGCCGTTAAGTTCCAGTCCTGGCCAGTCATTCCCTGATTGGTATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CAA 90 bp TCCTGGCCTAGTGAAAAAGAAGGCTTTTCTTTCTGGCCTCCAGAGACTGCTTCCCGGTCATCTCCATTCTaGCAAAGGACAAGAACCACT +
Preference number: 5 (lower is better)
Translates to: SWPSEKEGFSFWPPETASRSSPF*QRTRTT
Trigger: AGTGGTTCTTGTCCTTTGCAAGAATGGAGATGACCG...GGAAGCAGTCTCTGGAGGCCAGAAAGAAAAGCCTTCTTTTTCACTAGGCCAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CAA 90 bp ATGACTGGCCAGGACTGGAACTTAACGGCCTTGAGAACATGTGGGATTTGTCTTATGTGGGAACCAGTTTaGGTCCATTGCTGTCGGTCA +
Preference number: 5 (lower is better)
Translates to: MTGQDWNLTALRTCGICLMWEPV*VHCCRS
Trigger: TGACCGACAGCAATGGACCAAAACTGGTTCCCACAT...AAGACAAATCCCACATGTTCTCAAGGCCGTTAAGTTCCAGTCCTGGCCAGTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CAA 90 bp CAATCAGGGAATGACTGGCCAGGACTGGAACTTAACGGCCTTGAGAACATGTGGTGGAACTTAACGGCCTaGAGAACATGTGGGATTTGT +
Preference number: 5 (lower is better)
Translates to: QSGNDWPGLELNGLENMWWNLTA*RTCGIC
Trigger: ACAAATCCCACATGTTCTCAAGGCCGTTAAGTTCCA...CCACATGTTCTCAAGGCCGTTAAGTTCCAGTCCTGGCCAGTCATTCCCTGATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CAA 90 bp CGGACCAGACCTTGCCGTTCATTATTGCGCAAGCATTTCACCTTGGGCAACTTGCTAACAGACTCCATCTaGCTTCTAACTTCCAAGCTG +
Preference number: 5 (lower is better)
Translates to: RTRPCRSLLRKHFTLGNLLTDSI*LLTSKL
Trigger: CAGCTTGGAAGTTAGAAGCAAGATGGAGTCTGTTAG...CAAGTTGCCCAAGGTGAAATGCTTGCGCAATAATGAACGGCAAGGTCTGGTCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424136.5
CDS CCA 90 bp GACCACCTGCCCACCATAAGGACATTAGTCAATTCAGCACCCAGCTaGCAGCCATCAATTGGCCATCTATTAATAGCCAATTATCTGGGT +
Preference number: 5 (lower is better)
Translates to: DHLPTIRTLVNSAPS*QPSIGHLLIANYLG
Trigger: ACCCAGATAATTGGCTATTAATAGATGGCCAATTGATGGCTGCCAGCTGGGTGCTGAATTGACTAATGTCCTTATGGTGGGCAGGTGGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406653.5
ENST00000490212.5
CDS CCA 90 bp GATGAGCGCGATATTTCCAGCTCATTTCTTCCAAGGCTGTGTTCTTaGTTCCTTTGGGAAAGTTGGGTCTTCTCAGGCACATCCCCAATT +
Preference number: 5 (lower is better)
Translates to: DERDISSSFLPRLCS*FLWESWVFSGTSPI
Trigger: AATTGGGGATGTGCCTGAGAAGACCCAACTTTCCCAAAGGAACCAAGAACACAGCCTTGGAAGAAATGAGCTGGAAATATCGCGCTCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464038.5
CDS-3UTR CAA 90 bp CCTGGCCTAGTGAAAAAGAAGGCTTTTCTTTCTGGCCTCCAGAGACTGCTTCCTATGGAACTGAGCTTCTaGCAAGAGACATGGGAAATG +
Preference number: 5 (lower is better)
Translates to: PGLVKKKAFLSGLQRLLPMELSF*QETWEM
Trigger: CATTTCCCATGTCTCTTGCAAGAAGCTCAGTTCCAT...AGGAAGCAGTCTCTGGAGGCCAGAAAGAAAAGCCTTCTTTTTCACTAGGCCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324589.9
ENST00000406653.5
CDS-3UTR CAA 90 bp CCTGGCCTAGTGAAAAAGAAGGCTTTTCTTTCTGGCCTCCAGAGACTGCTTCCTCAGTCATCAGGGTCATaGCTGAAGTCATCCACTAAT +
Preference number: 5 (lower is better)
Translates to: PGLVKKKAFLSGLQRLLPQSSGS*LKSSTN
Trigger: ATTAGTGGATGACTTCAGCAATGACCCTGATGACTG...AGGAAGCAGTCTCTGGAGGCCAGAAAGAAAAGCCTTCTTTTTCACTAGGCCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CAA 90 bp TCCTGGCCTAGTGAAAAAGAAGGCTTTTCTTTCTGGCCTCCAGAGACTGCTTCCCAGTCATCAGGGTCATaGCTGAAGTCATCCACTAAT +
Preference number: 5 (lower is better)
Translates to: SWPSEKEGFSFWPPETASQSSGS*LKSSTN
Trigger: ATTAGTGGATGACTTCAGCAATGACCCTGATGACTG...GGAAGCAGTCTCTGGAGGCCAGAAAGAAAAGCCTTCTTTTTCACTAGGCCAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CAA 90 bp AGGATGTCTGAGGTGGTTGCAGGCTGCTTGCTGCCCAGTTTCCAGTCTGTTCTGTTCTTTATATACGTGTaGGCATTTCCATCAGGGAAA +
Preference number: 5 (lower is better)
Translates to: RMSEVVAGCLLPSFQSVLFFIYV*AFPSGK
Trigger: TTTCCCTGATGGAAATGCCAACACGTATATAAAGAA...CAGAACAGACTGGAAACTGGGCAGCAAGCAGCCTGCAACCACCTCAGACATCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CAA 90 bp CCTGGCCTAGTGAAAAAGAAGGCTTTTCTTTCTGGCCTCCAGAGACTGCTTCCTACTTCAGCTGTCCGCTaGGTGTTCTTTATATACGTG +
Preference number: 5 (lower is better)
Translates to: PGLVKKKAFLSGLQRLLPTSAVR*VFFIYV
Trigger: CACGTATATAAAGAACACCAAGCGGACAGCTGAAGT...AGGAAGCAGTCTCTGGAGGCCAGAAAGAAAAGCCTTCTTTTTCACTAGGCCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CAA 90 bp GACTGGCCAGGACTGGAACTTAACGGCCTTGAGAACATGTGGGATTTGTCTTTGGGCTCAACTTTAGGTTaGGGGTTTCTTGGTTGTTCT +
Preference number: 5 (lower is better)
Translates to: DWPGLELNGLENMWDLSLGSTLG*GFLGCS
Trigger: AGAACAACCAAGAAACCCCAAACCTAAAGTTGAGCC...CAAAGACAAATCCCACATGTTCTCAAGGCCGTTAAGTTCCAGTCCTGGCCAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CAA 90 bp AGATACCAATCAGGGAATGACTGGCCAGGACTGGAACTTAACGGCCTTGAGAACGGCTCAACTTTAGGTTaGGGGTTTCTTGGTTGTTCT +
Preference number: 5 (lower is better)
Translates to: RYQSGNDWPGLELNGLENGSTLG*GFLGCS
Trigger: AGAACAACCAAGAAACCCCAAACCTAAAGTTGAGCC...GTTCTCAAGGCCGTTAAGTTCCAGTCCTGGCCAGTCATTCCCTGATTGGTATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
CDS-3UTR CAA 90 bp TTTCACCTTGGGCAACTTGATGAGCTGTTTACAGTCATCAGGGTCATTGCTGAACGCAAGCATTTCACCTaGGGCAACTTGATGAGCTGT +
Preference number: 5 (lower is better)
Translates to: FHLGQLDELFTVIRVIAERKHFT*GNLMSC
Trigger: ACAGCTCATCAAGTTGCCCAAGGTGAAATGCTTGCG...TTCAGCAATGACCCTGATGACTGTAAACAGCTCATCAAGTTGCCCAAGGTGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424136.5
ENST00000455477.5
CDS CCA 90 bp AGCTCATTTCTTCCAAGGCTGTGTTCTTGGTTCCTTTGGGAAAGTTaGGTCTTCTCAGGCACATCCCCAATTCATGTTAAAATGGTTTGC +
Preference number: 5 (lower is better)
Translates to: SSFLPRLCSWFLWES*VFSGTSPIHVKMVC
Trigger: GCAAACCATTTTAACATGAATTGGGGATGTGCCTGAGAAGACCCAACTTTCCCAAAGGAACCAAGAACACAGCCTTGGAAGAAATGAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464038.5
CDS-3UTR CAA 90 bp TTGCCGTTCATTATTGCGCAAGCATTTCACCTTGGGCAACTTGATGAGCTGTTTCAGTCATCAGGGTCATaGCTGAAGTCATCCACTAAT +
Preference number: 5 (lower is better)
Translates to: LPFIIAQAFHLGQLDELFQSSGS*LKSSTN
Trigger: ATTAGTGGATGACTTCAGCAATGACCCTGATGACTG...AAACAGCTCATCAAGTTGCCCAAGGTGAAATGCTTGCGCAATAATGAACGGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424136.5
ENST00000455477.5
CDS TCA 90 bp CCCAGTCAGCGTCCGAAGGCTCACAAAGTCGCAGTAAGGATCAAATaGGGCAACTGTGGATATAAATGCTTTGTAAACTGTAAAACATCA +
Preference number: 5 (lower is better)
Translates to: PSQRPKAHKVAVRIK*GNCGYKCFVNCKTS
Trigger: TGATGTTTTACAGTTTACAAAGCATTTATATCCACAGTTGCCTCATTTGATCCTTACTGCGACTTTGTGAGCCTTCGGACGCTGACTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490212.5
CDS CAA 72 bp GCCGCCACCGCGGCTGCCGCCGCCGCCGCCGCCGCCTaGCCCGCTGCCGCCGATAGGGAAACTGACTCGAGC +
Preference number: 6 (lower is better)
Translates to: AATAAAAAAAAA*PAAADRETDSS
Trigger: GCTCGAGTCAGTTTCCCTATCGGCGGCAGCGGGCAAGGCGGCGGCGGCGGCGGCGGCAGCCGCGGTGGCGGC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430167.1
CDS GCA 72 bp CCGCCACCGCGGCTGCCGCCGCCGCCGCCGCCGCCTTaGCCGCTGCCGCCGATAGGGAAACTGACTCGAGCA +
Preference number: 6 (lower is better)
Translates to: PPPRLPPPPPPP*PLPPIGKLTRA
Trigger: TGCTCGAGTCAGTTTCCCTATCGGCGGCAGCGGGCAAGGCGGCGGCGGCGGCGGCGGCAGCCGCGGTGGCGG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430167.1
CDS CAA 90 bp GTTCCCCACGCCGCCACCGCGGCTGCCGCCGCCGCCGCCGCCGCCTaGCCCGCTGCCGCCGATAGGGAAACTGACTCGAGCAGCGAGAGG +
Preference number: 6 (lower is better)
Translates to: VPHAATAAAAAAAAA*PAAADRETDSSSER
Trigger: CCTCTCGCTGCTCGAGTCAGTTTCCCTATCGGCGGCAGCGGGCAAGGCGGCGGCGGCGGCGGCGGCAGCCGCGGTGGCGGCGTGGGGAAC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430167.1
CDS GCA 72 bp GCTGGACGCCCGCTCCAGCGGGAGAAGCGCGGTGGCTaGCGAGATGTTCCCCACGCCGCCACCGCGGCTGCC +
Preference number: 6 (lower is better)
Translates to: AGRPLQREKRGG*RDVPHAATAAA
Trigger: GGCAGCCGCGGTGGCGGCGTGGGGAACATCTCGGCAGCCACCGCGCTTCTCCCGCTGGAGCGGGCGTCCAGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349752.10
ENST00000430167.1
CDS GCA 72 bp AACCAGCCGACGAGTCAGGCGCCGCATGGTCCCCTTTaGCGCTTCCTCTCCGCGGCGCTACGTCCCGGGGGC +
Preference number: 6 (lower is better)
Translates to: NQPTSQAPHGPL*RFLSAALRPGG
Trigger: GCCCCCGGGACGTAGCGCCGCGGAGAGGAAGCGGCAAAGGGGACCATGCGGCGCCTGACTCGTCGGCTGGTT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000430167.1
CDS CAA 72 bp GAACCAGCCGACGAGTCAGGCGCCGCATGGTCCCCTTaGCCGCTTCCTCTCCGCGGCGCTACGTCCCGGGGG +
Preference number: 6 (lower is better)
Translates to: EPADESGAAWSP*PLPLRGATSRG
Trigger: CCCCCGGGACGTAGCGCCGCGGAGAGGAAGCGGCAAAGGGGACCATGCGGCGCCTGACTCGTCGGCTGGTTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000430167.1
CDS CCA 72 bp GTTGGCGGGGCAGGAGTCCTGGCGAGCGCCTCGCTCTaGGGAGCTCTAGACCCAGGATCCGGTTGGAGGGGC +
Preference number: 6 (lower is better)
Translates to: VGGAGVLASASL*GALDPGSGWRG
Trigger: GCCCCTCCAACCGGATCCTGGGTCTAGAGCTCCCCAGAGCGAGGCGCTCGCCAGGACTCCTGCCCCGCCAAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349752.10
ENST00000430167.1
CDS GCA 72 bp CTGATGGGCTCCGTGGGGTCCAGGCGCCGAGCCTTCTaGTCTGGGGAGAGCTGCTCCCACTGGAAGTGGAGG +
Preference number: 6 (lower is better)
Translates to: LMGSVGSRRRAF*SGESCSHWKWR
Trigger: CCTCCACTTCCAGTGGGAGCAGCTCTCCCCAGAGCAGAAGGCTCGGCGCCTGGACCCCACGGAGCCCATCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
ENST00000430167.1
ENST00000481023.5
ENST00000486564.5
CDS CCA 72 bp AGACTGGCAGAACCAGCCGACGAGTCAGGCGCCGCATaGTCCCCTTTGCCGCTTCCTCTCCGCGGCGCTACG +
Preference number: 6 (lower is better)
Translates to: RLAEPADESGAA*SPLPLPLRGAT
Trigger: CGTAGCGCCGCGGAGAGGAAGCGGCAAAGGGGACCATGCGGCGCCTGACTCGTCGGCTGGTTCTGCCAGTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000430167.1
CDS CCA 72 bp GAACAGCAGCACCGTGATCCAGAGCACCCCGAAGACTaGCAGAACCAGCCGACGAGTCAGGCGCCGCATGGT +
Preference number: 6 (lower is better)
Translates to: EQQHRDPEHPED*QNQPTSQAPHG
Trigger: ACCATGCGGCGCCTGACTCGTCGGCTGGTTCTGCCAGTCTTCGGGGTGCTCTGGATCACGGTGCTGCTGTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000430167.1
CDS GCA 72 bp CTGTTCTGGTCCAGGGAAGCACCACCCCATGGCCCTTaGTGCTTCTGGCAGGGGTCCTCAAGAGCTCACCAT +
Preference number: 6 (lower is better)
Translates to: LFWSREAPPHGP*CFWQGSSRAHH
Trigger: ATGGTGAGCTCTTGAGGACCCCTGCCAGAAGCAGCAAGGGCCATGGGGTGGTGCTTCCCTGGACCAGAACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
ENST00000475320.5
ENST00000486564.5
CDS CAA 72 bp TCTGTTCTGGTCCAGGGAAGCACCACCCCATGGCCCTaGCTGCTTCTGGCAGGGGTCCTCAAGAGCTCACCA +
Preference number: 6 (lower is better)
Translates to: SVLVQGSTTPWP*LLLAGVLKSSP
Trigger: TGGTGAGCTCTTGAGGACCCCTGCCAGAAGCAGCAAGGGCCATGGGGTGGTGCTTCCCTGGACCAGAACAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
ENST00000475320.5
ENST00000486564.5
CDS CCA 72 bp GGCAGGGGTCCTCAAGAGCTCACCATGTCCCAGTGCTaGCTCATGAGTGAGGACTCACATGGGTTGACGACG +
Preference number: 6 (lower is better)
Translates to: GRGPQELTMSQC*LMSEDSHGLTT
Trigger: CGTCGTCAACCCATGTGAGTCCTCACTCATGAGCCAGCACTGGGACATGGTGAGCTCTTGAGGACCCCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
ENST00000475320.5
ENST00000486564.5
CDS CAA 90 bp TTAGGGGTCTGCACTTCAGGTCCCGTCGGCACCTCCAACTTCCTCTaGGTTACCCAGAAGAACAGCAGCACCGTGATCCAGAGCACCCCG +
Preference number: 6 (lower is better)
Translates to: LGVCTSGPVGTSNFL*VTQKNSSTVIQSTP
Trigger: CGGGGTGCTCTGGATCACGGTGCTGCTGTTCTTCTGGGTAACCAAGAGGAAGTTGGAGGTGCCGACGGGACCTGAAGTGCAGACCCCTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000424136.5
ENST00000430167.1
ENST00000455477.5
CDS CAA 90 bp AGTTTCCAGTCTGTTCTGGTCCAGGGAAGCACCACCCCATGGCCCTaGCTGCTTCTGGCAGGGGTCCTCAAGAGCTCACCATGTCCCAGT +
Preference number: 6 (lower is better)
Translates to: SFQSVLVQGSTTPWP*LLLAGVLKSSPCPS
Trigger: ACTGGGACATGGTGAGCTCTTGAGGACCCCTGCCAGAAGCAGCAAGGGCCATGGGGTGGTGCTTCCCTGGACCAGAACAGACTGGAAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
ENST00000475320.5
ENST00000486564.5
CDS CCA 72 bp TGCGGTTTAATACACTCAGATGGCGAGTGTCCGGGATaGCCCGATTGCTGGAGATCCGCTCACTCTCCCGCT +
Preference number: 6 (lower is better)
Translates to: CGLIHSDGECPG*PDCWRSAHSPA
Trigger: AGCGGGAGAGTGAGCGGATCTCCAGCAATCGGGCCATCCCGGACACTCGCCATCTGAGTGTATTAAACCGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430167.1
CDS CCA 72 bp ATGACTGACAGGCACAGCTCCTCCTGGAGGATCTGCTaGGTGTATGTGAAGGCCCATACTTCCCGAAGGGCC +
Preference number: 6 (lower is better)
Translates to: MTDRHSSSWRIC*VYVKAHTSRRA
Trigger: GGCCCTTCGGGAAGTATGGGCCTTCACATACACCCAGCAGATCCTCCAGGAGGAGCTGTGCCTGTCAGTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486564.5
CDS CAA 90 bp GTGCGGTTTAATACACTCAGATGGCGAGTGTCCGGGATGGCCCGATaGCTGGAGATCCGCTCACTCTCCCGCTGGTTGAAAGCATACAGC +
Preference number: 6 (lower is better)
Translates to: VRFNTLRWRVSGMAR*LEIRSLSRWLKAYS
Trigger: GCTGTATGCTTTCAACCAGCGGGAGAGTGAGCGGATCTCCAGCAATCGGGCCATCCCGGACACTCGCCATCTGAGTGTATTAAACCGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430167.1
CDS TCA 72 bp ACTTCCTCTTGGTTACCCAGAAGAACAGCAGCACCGTaGTCCAGAGCACCCCGAAGACTGGCAGAACCAGCC +
Preference number: 6 (lower is better)
Translates to: TSSWLPRRTAAP*SRAPRRLAEPA
Trigger: GGCTGGTTCTGCCAGTCTTCGGGGTGCTCTGGATCACGGTGCTGCTGTTCTTCTGGGTAACCAAGAGGAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000430167.1
CDS CCA 72 bp GGGAACAAGGTGATGACTGACAGGCACAGCTCCTCCTaGAGGATCTGCTGGGTGTATGTGAAGGCCCATACC +
Preference number: 6 (lower is better)
Translates to: GNKVMTDRHSSS*RICWVYVKAHT
Trigger: GGTATGGGCCTTCACATACACCCAGCAGATCCTCCAGGAGGAGCTGTGCCTGTCAGTCATCACCTTGTTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
ENST00000475320.5
CDS CCA 72 bp TCTGTCGGATATTGCCCTTCTGGATGGAGGACTCCTTaGGGATGCTGGAGGAGAGTCACAGGGAGAGAGGAG +
Preference number: 6 (lower is better)
Translates to: SVGYCPSGWRTP*GCWRRVTGREE
Trigger: CTCCTCTCTCCCTGTGACTCTCCTCCAGCATCCCCAAGGAGTCCTCCATCCAGAAGGGCAATATCCGACAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475320.5
CDS CAA 72 bp TGCACTTCAGGTCCCGTCGGCACCTCCAACTTCCTCTaGGTTACCCAGAAGAACAGCAGCACCGTGATCCAG +
Preference number: 6 (lower is better)
Translates to: CTSGPVGTSNFL*VTQKNSSTVIQ
Trigger: CTGGATCACGGTGCTGCTGTTCTTCTGGGTAACCAAGAGGAAGTTGGAGGTGCCGACGGGACCTGAAGTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000424136.5
ENST00000430167.1
ENST00000455477.5
CDS CAA 72 bp AATACACTCAGATGGCGAGTGTCCGGGATGGCCCGATaGCTGGAGATCCGCTCACTCTCCCGCTGGTTGAAA +
Preference number: 6 (lower is better)
Translates to: NTLRWRVSGMAR*LEIRSLSRWLK
Trigger: TTTCAACCAGCGGGAGAGTGAGCGGATCTCCAGCAATCGGGCCATCCCGGACACTCGCCATCTGAGTGTATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430167.1
CDS CAA 72 bp CTCTGTCGGATATTGCCCTTCTGGATGGAGGACTCCTaGGGGATGCTGGAGGAGAGTCACAGGGAGAGAGGA +
Preference number: 6 (lower is better)
Translates to: LCRILPFWMEDS*GMLEESHRERG
Trigger: TCCTCTCTCCCTGTGACTCTCCTCCAGCATCCCCAAGGAGTCCTCCATCCAGAAGGGCAATATCCGACAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475320.5
CDS CAA 90 bp CACTTCTGTCTCTGTCGGATATTGCCCTTCTGGATGGAGGACTCCTaGGGGATGCTGGAGGAGAGTCACAGGGAGAGAGGAGAGTCCACT +
Preference number: 6 (lower is better)
Translates to: HFCLCRILPFWMEDS*GMLEESHRERGEST
Trigger: AGTGGACTCTCCTCTCTCCCTGTGACTCTCCTCCAGCATCCCCAAGGAGTCCTCCATCCAGAAGGGCAATATCCGACAGAGACAGAAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475320.5
CDS CCA 72 bp TCCAGGCACTTCTGTCTCTGTCGGATATTGCCCTTCTaGATGGAGGACTCCTTGGGGATGCTGAGTTCAGGG +
Preference number: 6 (lower is better)
Translates to: SRHFCLCRILPF*MEDSLGMLSSG
Trigger: CCCTGAACTCAGCATCCCCAAGGAGTCCTCCATCCAGAAGGGCAATATCCGACAGAGACAGAAGTGCCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
ENST00000430167.1
CDS CCA 72 bp GGCACTTCTGTCTCTGTCGGATATTGCCCTTCTGGATaGAGGACTCCTTGGGGATGCTGGAGGAGAGTCACA +
Preference number: 6 (lower is better)
Translates to: GTSVSVGYCPSG*RTPWGCWRRVT
Trigger: TGTGACTCTCCTCCAGCATCCCCAAGGAGTCCTCCATCCAGAAGGGCAATATCCGACAGAGACAGAAGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475320.5
CDS CCA 72 bp CGCTCTCAGAGATCCATTTTTGGACACGACTCATCTTaGGCCATGGCTGTTCCATGCCTGGGAGGGAGAGCA +
Preference number: 6 (lower is better)
Translates to: RSQRSIFGHDSS*AMAVPCLGGRA
Trigger: TGCTCTCCCTCCCAGGCATGGAACAGCCATGGCCCAAGATGAGTCGTGTCCAAAAATGGATCTCTGAGAGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485468.1
CDS CCA 72 bp GGGAACAAGGTGATGACTGACAGGCACAGCTCCTCCTaGAGGATCTGCTGGGTGTATGTGAAGGCCCATACT +
Preference number: 6 (lower is better)
Translates to: GNKVMTDRHSSS*RICWVYVKAHT
Trigger: AGTATGGGCCTTCACATACACCCAGCAGATCCTCCAGGAGGAGCTGTGCCTGTCAGTCATCACCTTGTTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486564.5
CDS CAA 72 bp CCCACAGGTCGTCCCAGTCAGCGTCCGAAGGCTGACTaGAAGAAAGACCTGAGTCTGCAAATGGAACTGAGC +
Preference number: 6 (lower is better)
Translates to: PTGRPSQRPKAD*KKDLSLQMELS
Trigger: GCTCAGTTCCATTTGCAGACTCAGGTCTTTCTTCAAGTCAGCCTTCGGACGCTGACTGGGACGACCTGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406653.5
ENST00000498206.5
CDS CAA 90 bp CTCACCATGTCCCAGTGCTGGCTCATGAGTGAGGACTCACATGGGTaGACGACGATTTCCTTGCCGTTCTCGGTGCCATCACCGAACATA +
Preference number: 6 (lower is better)
Translates to: LTMSQCWLMSEDSHG*TTISLPFSVPSPNI
Trigger: TATGTTCGGTGATGGCACCGAGAACGGCAAGGAAATCGTCGTCAACCCATGTGAGTCCTCACTCATGAGCCAGCACTGGGACATGGTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
ENST00000475320.5
ENST00000486564.5
CDS GCA 72 bp TACCAGCCAAAGTCCTACTCGCAGTTCCCATTGTCCTaGATGCCCCTCCACTCTACGACCCATCATCTTCCT +
Preference number: 6 (lower is better)
Translates to: YQPKSYSQFPLS*MPLHSTTHHLP
Trigger: AGGAAGATGATGGGTCGTAGAGTGGAGGGGCATGCAGGACAATGGGAACTGCGAGTAGGACTTTGGCTGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498206.5
CDS CAA 72 bp CCAGTTTTGGTCCATTGCTGTCGGTCATCTCCATTCTaGCAAAGGACAAGAACCACTGGGGCGCCAGGGAAC +
Preference number: 6 (lower is better)
Translates to: PVLVHCCRSSPF*QRTRTTGAPGN
Trigger: GTTCCCTGGCGCCCCAGTGGTTCTTGTCCTTTGCAAGAATGGAGATGACCGACAGCAATGGACCAAAACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
ENST00000475320.5
ENST00000486564.5
CDS CAA 90 bp TGCTGGCTCATGAGTGAGGACTCACATGGGTTGACGACGATTTCCTaGCCGTTCTCGGTGCCATCACCGAACATATCTGTATCGAGGCAG +
Preference number: 6 (lower is better)
Translates to: CWLMSEDSHGLTTIS*PFSVPSPNISVSRQ
Trigger: CTGCCTCGATACAGATATGTTCGGTGATGGCACCGAGAACGGCAAGGAAATCGTCGTCAACCCATGTGAGTCCTCACTCATGAGCCAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
ENST00000475320.5
ENST00000486564.5
CDS CAA 90 bp ACCATGGGGCTACTATACCAGCCAAAGTCCTACTCGCAGTTCCCATaGTCCTGCATGCCCCTCCACTCTACGACCCATCATCTTCCTATG +
Preference number: 6 (lower is better)
Translates to: TMGLLYQPKSYSQFP*SCMPLHSTTHHLPM
Trigger: CATAGGAAGATGATGGGTCGTAGAGTGGAGGGGCATGCAGGACAATGGGAACTGCGAGTAGGACTTTGGCTGGTATAGTAGCCCCATGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498206.5
CDS TCA 72 bp TGTGGGTCTGTCCCAGTCCCTCCACTGATGGAACAGTaGTGTGAACTTGGACAAGTCAGTAGCGCTCTCAGA +
Preference number: 6 (lower is better)
Translates to: CGSVPVPPLMEQ*CELGQVSSALR
Trigger: TCTGAGAGCGCTACTGACTTGTCCAAGTTCACATCACTGTTCCATCAGTGGAGGGACTGGGACAGACCCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485468.1
CDS GCA 72 bp TGGACTCAAACACCCCCAGCTCCAACGCTAACCAGCTaGGTGATCTTGAGCGAGATATGTAGGATCAGTGCT +
Preference number: 6 (lower is better)
Translates to: WTQTPPAPTLTS*VILSEICRISA
Trigger: AGCACTGATCCTACATATCTCGCTCAAGATCACGCAGCTGGTTAGCGTTGGAGCTGGGGGTGTTTGAGTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496397.5
CDS CCA 72 bp GTATCGAGGCAGAGGTGGGATGCTATGTGCTCGATGTaGGAACCAGTTTTGGTCCATTGCTGTCGGTCATCT +
Preference number: 6 (lower is better)
Translates to: VSRQRWDAMCSM*EPVLVHCCRSS
Trigger: AGATGACCGACAGCAATGGACCAAAACTGGTTCCCACATCGAGCACATAGCATCCCACCTCTGCCTCGATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
ENST00000475320.5
ENST00000486564.5
CDS CAA 90 bp CAAACTGGTCCCACAGGTCGTCCCAGTCAGCGTCCGAAGGCTGACTaGAAGAAAGACCTGAGTCTGCAAATGGAACTGAGCTTCTTGCAA +
Preference number: 6 (lower is better)
Translates to: QTGPTGRPSQRPKAD*KKDLSLQMELSFLQ
Trigger: TTGCAAGAAGCTCAGTTCCATTTGCAGACTCAGGTCTTTCTTCAAGTCAGCCTTCGGACGCTGACTGGGACGACCTGTGGGACCAGTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406653.5
ENST00000498206.5
CDS CCA 72 bp GTGCCATCACCGAACATATCTGTATCGAGGCAGAGGTaGGATGCTATGTGCTCGATGTGGGAACCAGTTTTG +
Preference number: 6 (lower is better)
Translates to: VPSPNISVSRQR*DAMCSMWEPVL
Trigger: CAAAACTGGTTCCCACATCGAGCACATAGCATCCCACCTCTGCCTCGATACAGATATGTTCGGTGATGGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
ENST00000475320.5
ENST00000486564.5
CDS GCA 72 bp ATCACCGAACATATCTGTATCGAGGCAGAGGTGGGATaGTATGTGCTCGATGTGGGAACCAGTTTTGGTCCA +
Preference number: 6 (lower is better)
Translates to: ITEHICIEAEVG*YVLDVGTSFGP
Trigger: TGGACCAAAACTGGTTCCCACATCGAGCACATAGCATCCCACCTCTGCCTCGATACAGATATGTTCGGTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
ENST00000475320.5
ENST00000486564.5
CDS CCA 72 bp TTGGACAAGTCAGTAGCGCTCTCAGAGATCCATTTTTaGACACGACTCATCTTGGGCCATGGCTGTTCCATG +
Preference number: 6 (lower is better)
Translates to: LDKSVALSEIHF*TRLILGHGCSM
Trigger: CATGGAACAGCCATGGCCCAAGATGAGTCGTGTCCAAAAATGGATCTCTGAGAGCGCTACTGACTTGTCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485468.1
CDS CAA 72 bp ATGAGTGAGGACTCACATGGGTTGACGACGATTTCCTaGCCGTTCTCGGTGCCATCACCGAACATATCTGTA +
Preference number: 6 (lower is better)
Translates to: MSEDSHGLTTIS*PFSVPSPNISV
Trigger: TACAGATATGTTCGGTGATGGCACCGAGAACGGCAAGGAAATCGTCGTCAACCCATGTGAGTCCTCACTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
ENST00000475320.5
ENST00000486564.5
CDS CAA 72 bp CTTGGACAAGTCAGTAGCGCTCTCAGAGATCCATTTTaGGACACGACTCATCTTGGGCCATGGCTGTTCCAT +
Preference number: 6 (lower is better)
Translates to: LGQVSSALRDPF*DTTHLGPWLFH
Trigger: ATGGAACAGCCATGGCCCAAGATGAGTCGTGTCCAAAAATGGATCTCTGAGAGCGCTACTGACTTGTCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485468.1
CDS CAA 90 bp AGTGGGTGGAAGGTCCGTGCAATACACCAGCAGTGTGCATCTGACTaGAAGAAAGACCTGAGTCTGCAAATGGAACTGAGCTTCTTGCAA +
Preference number: 6 (lower is better)
Translates to: SGWKVRAIHQQCASD*KKDLSLQMELSFLQ
Trigger: TTGCAAGAAGCTCAGTTCCATTTGCAGACTCAGGTCTTTCTTCAAGTCAGATGCACACTGCTGGTGTATTGCACGGACCTTCCACCCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324589.9
CDS TCA 72 bp GTGGAAGGTCCGTGCAATACACCAGCAGTGTGCATCTaGCTTGAAGAAAGACCTGAGTCTGCAAATGGAACT +
Preference number: 6 (lower is better)
Translates to: VEGPCNTPAVCI*LEERPESANGT
Trigger: AGTTCCATTTGCAGACTCAGGTCTTTCTTCAAGTCAGATGCACACTGCTGGTGTATTGCACGGACCTTCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324589.9
CDS GCA 72 bp AACATATCTGTATCGAGGCAGAGGTGGGATGCTATGTaGTCGATGTGGGAACCAGTTTTGGTCCATTGCTGT +
Preference number: 6 (lower is better)
Translates to: NISVSRQRWDAM*SMWEPVLVHCC
Trigger: ACAGCAATGGACCAAAACTGGTTCCCACATCGAGCACATAGCATCCCACCTCTGCCTCGATACAGATATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324589.9
ENST00000349752.10
ENST00000406653.5
ENST00000475320.5
ENST00000486564.5
CDS CAA 72 bp AAGGTCCGTGCAATACACCAGCAGTGTGCATCTGACTaGAAGAAAGACCTGAGTCTGCAAATGGAACTGAGC +
Preference number: 6 (lower is better)
Translates to: KVRAIHQQCASD*KKDLSLQMELS
Trigger: GCTCAGTTCCATTTGCAGACTCAGGTCTTTCTTCAAGTCAGATGCACACTGCTGGTGTATTGCACGGACCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324589.9
CDS CAA 72 bp CAGCTCATTTCTTCCAAGGCTGTGTTCTTGGTTCCTTaGGGAAAGTTGGGTCTTCTCAGGCACATCCCCAAT +
Preference number: 6 (lower is better)
Translates to: QLISSKAVFLVP*GKLGLLRHIPN
Trigger: ATTGGGGATGTGCCTGAGAAGACCCAACTTTCCCAAAGGAACCAAGAACACAGCCTTGGAAGAAATGAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464038.5
CDS CAA 90 bp GCTGACTTGAAGAAAGACCTGAGTCTGCAAATGGAACTGAGCTTCTaGCAAGAGACATGGGAAATGACATACAGCAAGGTGTCCTCCTGT +
Preference number: 6 (lower is better)
Translates to: ADLKKDLSLQMELSF*QETWEMTYSKVSSC
Trigger: ACAGGAGGACACCTTGCTGTATGTCATTTCCCATGTCTCTTGCAAGAAGCTCAGTTCCATTTGCAGACTCAGGTCTTTCTTCAAGTCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406653.5
ENST00000498206.5
CDS CCA 72 bp CTACAGTGGGCTGCTGAAATTGCATTCAGAACGAAATaGGTAGGCTCAGGTGTCAGCTGCAAACTGTTTTCA +
Preference number: 6 (lower is better)
Translates to: LQWAAEIAFRTK*VGSGVSCKLFS
Trigger: TGAAAACAGTTTGCAGCTGACACCTGAGCCTACCCATTTCGTTCTGAATGCAATTTCAGCAGCCCACTGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485468.1
CDS CAA 90 bp TCTGACTTGAAGAAAGACCTGAGTCTGCAAATGGAACTGAGCTTCTaGCAAGAGACATGGGAAATGACATACAGCAAGGTGTCCTCCTGT +
Preference number: 6 (lower is better)
Translates to: SDLKKDLSLQMELSF*QETWEMTYSKVSSC
Trigger: ACAGGAGGACACCTTGCTGTATGTCATTTCCCATGTCTCTTGCAAGAAGCTCAGTTCCATTTGCAGACTCAGGTCTTTCTTCAAGTCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324589.9
CDS CCA 72 bp CCCACCATAAGGACATTAGTCAATTCAGCACCCAGCTaGCAGCCATCAATTGGCCATCTATTAATAGCCAAT +
Preference number: 6 (lower is better)
Translates to: PTIRTLVNSAPS*QPSIGHLLIAN
Trigger: ATTGGCTATTAATAGATGGCCAATTGATGGCTGCCAGCTGGGTGCTGAATTGACTAATGTCCTTATGGTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406653.5
ENST00000490212.5
CDS CCA 72 bp GATATTTCCAGCTCATTTCTTCCAAGGCTGTGTTCTTaGTTCCTTTGGGAAAGTTGGGTCTTCTCAGGCACA +
Preference number: 6 (lower is better)
Translates to: DISSSFLPRLCS*FLWESWVFSGT
Trigger: TGTGCCTGAGAAGACCCAACTTTCCCAAAGGAACCAAGAACACAGCCTTGGAAGAAATGAGCTGGAAATATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464038.5
CDS CCA 72 bp ACGACCCATCATCTTCCTATGATCCAGCACATACTTTaGTTAGCTGGTGCTTGTGCCATAGCAGTTGCTAAA +
Preference number: 6 (lower is better)
Translates to: TTHHLPMIQHIL*LAGACAIAVAK
Trigger: TTTAGCAACTGCTATGGCACAAGCACCAGCTAACCAAAGTATGTGCTGGATCATAGGAAGATGATGGGTCGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498206.5
CDS CAA 72 bp AAGAAAGACCTGAGTCTGCAAATGGAACTGAGCTTCTaGCAAGAGACATGGGAAATGACATACAGCAAGGTG +
Preference number: 6 (lower is better)
Translates to: KKDLSLQMELSF*QETWEMTYSKV
Trigger: CACCTTGCTGTATGTCATTTCCCATGTCTCTTGCAAGAAGCTCAGTTCCATTTGCAGACTCAGGTCTTTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324589.9
ENST00000406653.5
ENST00000498206.5
CDS TCA 72 bp CGTCCGAAGGCTCACAAAGTCGCAGTAAGGATCAAATaGGGCAACTGTGGATATAAATGCTTTGTAAACTGT +
Preference number: 6 (lower is better)
Translates to: RPKAHKVAVRIK*GNCGYKCFVNC
Trigger: ACAGTTTACAAAGCATTTATATCCACAGTTGCCTCATTTGATCCTTACTGCGACTTTGTGAGCCTTCGGACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490212.5
CDS TCA 72 bp AGGACCAAACCTCACAAAGTCGCAGTAAGGATCAAATaGGGCAACTGTGGATATAAATGCTTTGTAAACTGT +
Preference number: 6 (lower is better)
Translates to: RTKPHKVAVRIK*GNCGYKCFVNC
Trigger: ACAGTTTACAAAGCATTTATATCCACAGTTGCCTCATTTGATCCTTACTGCGACTTTGTGAGGTTTGGTCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406653.5
ENST00000496397.5