RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GALNS (Homo sapiens)

Ensembl gene IDs: ENSG00000141012

Ensembl transcript IDs: ENST00000268695.10, ENST00000561812.1, ENST00000562593.5, ENST00000562831.1, ENST00000564263.1, ENST00000565364.1, ENST00000567525.5, ENST00000567779.1, ENST00000568311.1, ENST00000568613.5, ENST00000569433.1

Found 581 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACGTTGAGCTGGGGCTGCGCGGGGACCAAGGCCTCCTGGTGCTGCTaGACGACCGAGGTGATCCTGCTGAGGGCCTCCTGGTACTCGGCG +
Preference number: 1 (lower is better)
Translates to: TLSWGCAGTKASWCC*TTEVILLRASWYSA
Trigger: CGCCGAGTACCAGGAGGCCCTCAGCAGGATCACCTCGGTCGTCCAGCAGCACCAGGAGGCCTTGGTCCCCGCGCAGCCCCAGCTCAACGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
3UTR CCA 90 bp CCCGGAGGTGCCCAGTTCATGACCGCCCAGTTGCACACGTTGAGCTaGGGCTGCGCGGGGACCAAGGCCTCCTGGTGCTGCTGGACGACC +
Preference number: 1 (lower is better)
Translates to: PGGAQFMTAQLHTLS*GCAGTKASWCCWTT
Trigger: GGTCGTCCAGCAGCACCAGGAGGCCTTGGTCCCCGCGCAGCCCCAGCTCAACGTGTGCAACTGGGCGGTCATGAACTGGGCACCTCCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
3UTR GCA 90 bp CACACGTTGAGCTGGGGCTGCGCGGGGACCAAGGCCTCCTGGTGCTaGTGGACGACCGAGGTGATCCTGCTGAGGGCCTCCTGGTACTCG +
Preference number: 1 (lower is better)
Translates to: HTLSWGCAGTKASWC*WTTEVILLRASWYS
Trigger: CGAGTACCAGGAGGCCCTCAGCAGGATCACCTCGGTCGTCCAGCAGCACCAGGAGGCCTTGGTCCCCGCGCAGCCCCAGCTCAACGTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
3UTR CCA 90 bp GCCGTGGGCGAGGAGGAGGGCCAAGCACACGCCAGGGTCAGGTCCTaGGCAGGTGGAATTGTGCAGTCCCCCTGCGTCTGCAGGTGCTGT +
Preference number: 1 (lower is better)
Translates to: AVGEEEGQAHARVRS*AGGIVQSPCVCRCC
Trigger: ACAGCACCTGCAGACGCAGGGGGACTGCACAATTCCACCTGCCCAGGACCTGACCCTGGCGTGTGCTTGGCCCTCCTCCTCGCCCACGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
3UTR CCA 90 bp CAGTTGCACACGTTGAGCTGGGGCTGCGCGGGGACCAAGGCCTCCTaGTGCTGCTGGACGACCGAGGTGATCCTGCTGAGGGCCTCCTGG +
Preference number: 1 (lower is better)
Translates to: QLHTLSWGCAGTKAS*CCWTTEVILLRASW
Trigger: CCAGGAGGCCCTCAGCAGGATCACCTCGGTCGTCCAGCAGCACCAGGAGGCCTTGGTCCCCGCGCAGCCCCAGCTCAACGTGTGCAACTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
3UTR TCA 90 bp CCTTGGGTGTGGCCCGTGGCCCCCACTGGTCAGCACAGGTGGGTCTaGAGGCACCTGTCAGGGTCTCTGCTGGTCGGAGCCAGCACACAG +
Preference number: 1 (lower is better)
Translates to: PWVWPVAPTGQHRWV*RHLSGSLLVGASTQ
Trigger: CTGTGTGCTGGCTCCGACCAGCAGAGACCCTGACAGGTGCCTTCAGACCCACCTGTGCTGACCAGTGGGGGCCACGGGCCACACCCAAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569433.1
3UTR CCA 90 bp GTCCCCCTGCGTCTGCAGGTGCTGTCTGTCTGGCTTGGGCAGGGTTaGGGGAGGACCGAGGCCAGAGCCATCCTTCCTCCAGGCACTTGC +
Preference number: 1 (lower is better)
Translates to: VPLRLQVLSVWLGQG*GRTEARAILPPGTC
Trigger: GCAAGTGCCTGGAGGAAGGATGGCTCTGGCCTCGGTCCTCCCCCAACCCTGCCCAAGCCAGACAGACAGCACCTGCAGACGCAGGGGGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
3UTR CCA 90 bp TCCTGGTGCTGCTGGACGACCGAGGTGATCCTGCTGAGGGCCTCCTaGTACTCGGCGCTGGCAAAGCTGAGGGGGAACCTCTCCCCTGGG +
Preference number: 1 (lower is better)
Translates to: SWCCWTTEVILLRAS*YSALAKLRGNLSPG
Trigger: CCCAGGGGAGAGGTTCCCCCTCAGCTTTGCCAGCGCCGAGTACCAGGAGGCCCTCAGCAGGATCACCTCGGTCGTCCAGCAGCACCAGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
3UTR GCA 90 bp AGGGTCAGGTCCTGGGCAGGTGGAATTGTGCAGTCCCCCTGCGTCTaGAGGTGCTGTCTGTCTGGCTTGGGCAGGGTTGGGGGAGGACCG +
Preference number: 1 (lower is better)
Translates to: RVRSWAGGIVQSPCV*RCCLSGLGRVGGGP
Trigger: CGGTCCTCCCCCAACCCTGCCCAAGCCAGACAGACAGCACCTGCAGACGCAGGGGGACTGCACAATTCCACCTGCCCAGGACCTGACCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
3UTR GCA 90 bp CACGCCAGGGTCAGGTCCTGGGCAGGTGGAATTGTGCAGTCCCCCTaGGTCTGCAGGTGCTGTCTGTCTGGCTTGGGCAGGGTTGGGGGA +
Preference number: 1 (lower is better)
Translates to: HARVRSWAGGIVQSP*VCRCCLSGLGRVGG
Trigger: TCCCCCAACCCTGCCCAAGCCAGACAGACAGCACCTGCAGACGCAGGGGGACTGCACAATTCCACCTGCCCAGGACCTGACCCTGGCGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
3UTR TCA 90 bp GGCACCTGTCAGGGTCTCTGCTGGTCGGAGCCAGCACACAGGGGCTaGGCGACACCGACGGCCCAAAACTGTCTGGTACTCGGTGTCGTC +
Preference number: 1 (lower is better)
Translates to: GTCQGLCWSEPAHRG*ATPTAQNCLVLGVV
Trigger: GACGACACCGAGTACCAGACAGTTTTGGGCCGTCGGTGTCGCTCAGCCCCTGTGTGCTGGCTCCGACCAGCAGAGACCCTGACAGGTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569433.1
3UTR GCA 90 bp CAGCTGGTGGCTCACCTGGCCTGCAGTGACGTGCCCTGGCCACCATaGGAGGGCAGGCTCCCTCATCCCTCCTTCAAACGTGGTCTGCTT +
Preference number: 1 (lower is better)
Translates to: QLVAHLACSDVPWPP*EGRLPHPSFKRGLL
Trigger: AAGCAGACCACGTTTGAAGGAGGGATGAGGGAGCCTGCCCTCGCATGGTGGCCAGGGCACGTCACTGCAGGCCAGGTGAGCCACCAGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
3UTR CCA 90 bp CGGCGTCTCCATACCGCCCTCGCTGACTGGTGCCCAAGAAGGGTTTaGAGGCATAGACGGGTGCGTGCGTGGCGTCGACAGCCCAGTAGA +
Preference number: 1 (lower is better)
Translates to: RRLHTALADWCPRRV*RHRRVRAWRRQPSR
Trigger: TCTACTGGGCTGTCGACGCCACGCACGCACCCGTCTATGCCTCCAAACCCTTCTTGGGCACCAGTCAGCGAGGGCGGTATGGAGACGCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
3UTR TCA 90 bp TCTGGGGTCCTGCACGGTGACCCATGCCCCAGGCAGGCTCATTCCTaGGTCTCCAGGTGGCTCCCACAAGGAGTTAGGGAAGGAGGCCTC +
Preference number: 1 (lower is better)
Translates to: SGVLHGDPCPRQAHS*VSRWLPQGVREGGL
Trigger: GAGGCCTCCTTCCCTAACTCCTTGTGGGAGCCACCTGGAGACTCAGGAATGAGCCTGCCTGGGGCATGGGTCACCGTGCAGGACCCCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569433.1
3UTR GCA 90 bp CGGCCTTCTTCAGAAGCTCCGGCAGGAGCTGCTCCGAGTCTGGGATaGCGCCCACAATCTCCTGCGGTGTGTAGGCGTTTCTGGCATGGG +
Preference number: 1 (lower is better)
Translates to: RPSSEAPAGAAPSLG*RPQSPAVCRRFWHG
Trigger: CCCATGCCAGAAACGCCTACACACCGCAGGAGATTGTGGGCGGCATCCCAGACTCGGAGCAGCTCCTGCCGGAGCTTCTGAAGAAGGCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568613.5
3UTR CCA 90 bp GTAGCCGGCCTTCTTCAGAAGCTCCGGCAGGAGCTGCTCCGAGTCTaGGATGCCGCCCACAATCTCCTGCGGTGTGTAGGCGTTTCTGGC +
Preference number: 1 (lower is better)
Translates to: VAGLLQKLRQELLRV*DAAHNLLRCVGVSG
Trigger: GCCAGAAACGCCTACACACCGCAGGAGATTGTGGGCGGCATCCCAGACTCGGAGCAGCTCCTGCCGGAGCTTCTGAAGAAGGCCGGCTAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568613.5
3UTR TCA 90 bp ATGCCCTGTCTGAAGTTCTCCCAGGAGTTGGTCCAGGTCCAGAAGTaGGCCTTGTGCTGCCCGAGGGTGGCCGCCATCAGCGTGTCGCCA +
Preference number: 1 (lower is better)
Translates to: MPCLKFSQELVQVQK*ALCCPRVAAISVSP
Trigger: TGGCGACACGCTGATGGCGGCCACCCTCGGGCAGCACAAGGCTCACTTCTGGACCTGGACCAACTCCTGGGAGAACTTCAGACAGGGCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
3UTR GCA 90 bp CCCTCGCTGACTGGTGCCCAAGAAGGGTTTGGAGGCATAGACGGGTaGGTGCGTGGCGTCGACAGCCCAGTAGAGGAAAAAGGGGTGGTG +
Preference number: 1 (lower is better)
Translates to: PSLTGAQEGFGGIDG*VRGVDSPVEEKGVV
Trigger: CACCACCCCTTTTTCCTCTACTGGGCTGTCGACGCCACGCACGCACCCGTCTATGCCTCCAAACCCTTCTTGGGCACCAGTCAGCGAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
3UTR CCA 90 bp GACTGGTGCCCAAGAAGGGTTTGGAGGCATAGACGGGTGCGTGCGTaGCGTCGACAGCCCAGTAGAGGAAAAAGGGGTGGTGCCGTGCCT +
Preference number: 1 (lower is better)
Translates to: DWCPRRVWRHRRVRA*RRQPSRGKRGGAVP
Trigger: AGGCACGGCACCACCCCTTTTTCCTCTACTGGGCTGTCGACGCCACGCACGCACCCGTCTATGCCTCCAAACCCTTCTTGGGCACCAGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
3UTR TCA 90 bp GAGACAGTAGGGTTTCAACCCAGGTGTGTCTGGGGTCCTGCACGGTaGCCCATGCCCCAGGCAGGCTCATTCCTGAGTCTCCAGGTGGCT +
Preference number: 1 (lower is better)
Translates to: ETVGFQPRCVWGPAR*PMPQAGSFLSLQVA
Trigger: AGCCACCTGGAGACTCAGGAATGAGCCTGCCTGGGGCATGGGTCACCGTGCAGGACCCCAGACACACCTGGGTTGAAACCCTACTGTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569433.1
3UTR TCA 90 bp TCCTCCAGGCACTTGCAGGGCCAACCGGAGATTCTAGGCCTGGCCTaGGTCTGCGCAGGTGCTAGTGGGACCAGAGGCACTTCTTGGGAA +
Preference number: 1 (lower is better)
Translates to: SSRHLQGQPEILGLA*VCAGASGTRGTSWE
Trigger: TTCCCAAGAAGTGCCTCTGGTCCCACTAGCACCTGCGCAGACTCAGGCCAGGCCTAGAATCTCCGGTTGGCCCTGCAAGTGCCTGGAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
3UTR GCA 90 bp TGTCCGCGACGTGCAGGTCTTGGAGGAGCTCCAGTATCTTCCCAATaGTGTCATCAATCTCCCGGACGGCGTCTCCATACCGCCCTCGCT +
Preference number: 1 (lower is better)
Translates to: CPRRAGLGGAPVSSQ*CHQSPGRRLHTALA
Trigger: AGCGAGGGCGGTATGGAGACGCCGTCCGGGAGATTGATGACAGCATTGGGAAGATACTGGAGCTCCTCCAAGACCTGCACGTCGCGGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
3UTR GCA 90 bp AAGCTTGGAGACAGTAGGGTTTCAACCCAGGTGTGTCTGGGGTCCTaGACGGTGACCCATGCCCCAGGCAGGCTCATTCCTGAGTCTCCA +
Preference number: 1 (lower is better)
Translates to: KLGDSRVSTQVCLGS*TVTHAPGRLIPESP
Trigger: TGGAGACTCAGGAATGAGCCTGCCTGGGGCATGGGTCACCGTGCAGGACCCCAGACACACCTGGGTTGAAACCCTACTGTCTCCAAGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569433.1
3UTR GCA 90 bp GTGCGTGGCGTCGACAGCCCAGTAGAGGAAAAAGGGGTGGTGCCGTaGCTGTCTCTTAATGAAGTCCAGGGCTTCCTGCAGGTAGATCTG +
Preference number: 1 (lower is better)
Translates to: VRGVDSPVEEKGVVP*LSLNEVQGFLQVDL
Trigger: CAGATCTACCTGCAGGAAGCCCTGGACTTCATTAAGAGACAGGCACGGCACCACCCCTTTTTCCTCTACTGGGCTGTCGACGCCACGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
3UTR CCA 90 bp TGCCGCCCTCGATGGCGAGCACAGAGGGTTGGCAGAATAGAAGTTTaGGAAAAGCAGCCCTTCTGCAGCCATCCGGTCCAAATTCGGGGT +
Preference number: 1 (lower is better)
Translates to: CRPRWRAQRVGRIEV*EKQPFCSHPVQIRG
Trigger: ACCCCGAATTTGGACCGGATGGCTGCAGAAGGGCTGCTTTTCCCAAACTTCTATTCTGCCAACCCTCTGTGCTCGCCATCGAGGGCGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568613.5
3UTR GCA 90 bp GCGCCGTTGTCCGACGTGAAGAAGACGAAGGTGTTGTCCGCGACGTaGAGGTCTTGGAGGAGCTCCAGTATCTTCCCAATGCTGTCATCA +
Preference number: 1 (lower is better)
Translates to: APLSDVKKTKVLSAT*RSWRSSSIFPMLSS
Trigger: TGATGACAGCATTGGGAAGATACTGGAGCTCCTCCAAGACCTGCACGTCGCGGACAACACCTTCGTCTTCTTCACGTCGGACAACGGCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
3UTR CCA 90 bp TCCGACGTGAAGAAGACGAAGGTGTTGTCCGCGACGTGCAGGTCTTaGAGGAGCTCCAGTATCTTCCCAATGCTGTCATCAATCTCCCGG +
Preference number: 1 (lower is better)
Translates to: SDVKKTKVLSATCRS*RSSSIFPMLSSISR
Trigger: CCGGGAGATTGATGACAGCATTGGGAAGATACTGGAGCTCCTCCAAGACCTGCACGTCGCGGACAACACCTTCGTCTTCTTCACGTCGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
3UTR TCA 90 bp GGAAGATCAGGGGCAGCTTCGTGTGGTCTTCCAGATTGTGAGTTGTaGCCCCTGAAACGTTCTGCCCAGGGCAGAAATCAATGCCCTGTC +
Preference number: 1 (lower is better)
Translates to: GRSGAASCGLPDCEL*PLKRSAQGRNQCPV
Trigger: GACAGGGCATTGATTTCTGCCCTGGGCAGAACGTTTCAGGGGTCACAACTCACAATCTGGAAGACCACACGAAGCTGCCCCTGATCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
3UTR TCA 90 bp CCCAGGTGGAAGATCAGGGGCAGCTTCGTGTGGTCTTCCAGATTGTaGGTTGTGACCCCTGAAACGTTCTGCCCAGGGCAGAAATCAATG +
Preference number: 1 (lower is better)
Translates to: PRWKIRGSFVWSSRL*VVTPETFCPGQKSM
Trigger: CATTGATTTCTGCCCTGGGCAGAACGTTTCAGGGGTCACAACTCACAATCTGGAAGACCACACGAAGCTGCCCCTGATCTTCCACCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
3UTR CCA 90 bp GGATGTTGGGCCTGGCCTTGTTGTCATAAGGTCCAAAGTGGCAGTTaGGGGATCCAAACCACTCATCAAATCCGTGCTTCAGGGGGTGGA +
Preference number: 1 (lower is better)
Translates to: GCWAWPCCHKVQSGS*GIQTTHQIRASGGG
Trigger: TCCACCCCCTGAAGCACGGATTTGATGAGTGGTTTGGATCCCCCAACTGCCACTTTGGACCTTATGACAACAAGGCCAGGCCCAACATCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568613.5
3UTR CCA 90 bp ATCTGCCAACCATCTCCCAGTCCCTGTACACAGGGATGTTGGGCCTaGCCTTGTTGTCATAAGGTCCAAAGTGGCAGTTGGGGGATCCAA +
Preference number: 1 (lower is better)
Translates to: ICQPSPSPCTQGCWA*PCCHKVQSGSWGIQ
Trigger: TTGGATCCCCCAACTGCCACTTTGGACCTTATGACAACAAGGCCAGGCCCAACATCCCTGTGTACAGGGACTGGGAGATGGTTGGCAGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568613.5
3UTR TCA 90 bp CAGGGGCAGCTTCGTGTGGTCTTCCAGATTGTGAGTTGTGACCCCTaGAACGTTCTGCCCAGGGCAGAAATCAATGCCCTGTCTGAAGTT +
Preference number: 1 (lower is better)
Translates to: QGQLRVVFQIVSCDP*NVLPRAEINALSEV
Trigger: AACTTCAGACAGGGCATTGATTTCTGCCCTGGGCAGAACGTTTCAGGGGTCACAACTCACAATCTGGAAGACCACACGAAGCTGCCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
3UTR CCA 90 bp CATAATATCTGCCAACCATCTCCCAGTCCCTGTACACAGGGATGTTaGGCCTGGCCTTGTTGTCATAAGGTCCAAAGTGGCAGTTGGGGG +
Preference number: 1 (lower is better)
Translates to: HNICQPSPSPCTQGC*AWPCCHKVQSGSWG
Trigger: CCCCCAACTGCCACTTTGGACCTTATGACAACAAGGCCAGGCCCAACATCCCTGTGTACAGGGACTGGGAGATGGTTGGCAGATATTATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568613.5
3UTR CCA 90 bp ATTAGCGTCCAGGGAAATTCCTTGTGGACAAAGGACAGACGGAACTaGAAGTCATCCCTCTGGGGCTCCCCTGAGACAAACGCTTATATG +
Preference number: 1 (lower is better)
Translates to: ISVQGNSLWTKDRRN*KSSLWGSPETNAYM
Trigger: CATATAAGCGTTTGTCTCAGGGGAGCCCCAGAGGGATGACTTCCAGTTCCGTCTGTCCTTTGTCCACAAGGAATTTCCCTGGACGCTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
3UTR-3UTR TCA 90 bp CCGTGGCCCCCACTGGTCAGCACAGGTGGGTCTGAAGGCACCTGTCAGGGTCTCTGGGGTCCTGCACGGTaGCCCATGCCCCAGGCAGGC +
Preference number: 2 (lower is better)
Translates to: PWPPLVSTGGSEGTCQGLWGPAR*PMPQAG
Trigger: GCCTGCCTGGGGCATGGGTCACCGTGCAGGACCCCA...GAGACCCTGACAGGTGCCTTCAGACCCACCTGTGCTGACCAGTGGGGGCCACGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000569433.1
3UTR-3UTR GCA 90 bp TGGGGCTGCGCGGGGACCAAGGCCTCCTGGTGCTGCTGGACGACCGAGGTGATCGTGGCTCACCTGGCCTaGAGTGACGTGCCCTGGCCA +
Preference number: 2 (lower is better)
Translates to: WGCAGTKASWCCWTTEVIVAHLA*SDVPWP
Trigger: TGGCCAGGGCACGTCACTGCAGGCCAGGTGAGCCAC...GATCACCTCGGTCGTCCAGCAGCACCAGGAGGCCTTGGTCCCCGCGCAGCCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
3UTR CAA 90 bp TCACAGCCCGGAGGTGCCCAGTTCATGACCGCCCAGTTGCACACGTaGAGCTGGGGCTGCGCGGGGACCAAGGCCTCCTGGTGCTGCTGG +
Preference number: 2 (lower is better)
Translates to: SQPGGAQFMTAQLHT*SWGCAGTKASWCCW
Trigger: CCAGCAGCACCAGGAGGCCTTGGTCCCCGCGCAGCCCCAGCTCAACGTGTGCAACTGGGCGGTCATGAACTGGGCACCTCCGGGCTGTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
3UTR-3UTR TCA 90 bp GTTGGTCCAGGTCCAGAAGTGAGCCTTGTGCTGCCCGAGGGTGGCCGCCATCAGGAGACGGCAGGGTCCTaGGGTCTGAGGCGCCGTGGG +
Preference number: 2 (lower is better)
Translates to: VGPGPEVSLVLPEGGRHQETAGS*GLRRRG
Trigger: CCCACGGCGCCTCAGACCTCAGGACCCTGCCGTCTC...CTGATGGCGGCCACCCTCGGGCAGCACAAGGCTCACTTCTGGACCTGGACCAAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567525.5
3UTR-3UTR GCA 90 bp ATGACCGCCCAGTTGCACACGTTGAGCTGGGGCTGCGCGGGGACCAAGGCCTCCGGAGGCATAGACGGGTaGGTGCGTGGCGTCGACAGC +
Preference number: 2 (lower is better)
Translates to: MTAQLHTLSWGCAGTKASGGIDG*VRGVDS
Trigger: GCTGTCGACGCCACGCACGCACCCGTCTATGCCTCC...GGAGGCCTTGGTCCCCGCGCAGCCCCAGCTCAACGTGTGCAACTGGGCGGTCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
3UTR-3UTR TCA 90 bp GTGCAGTCCCCCTGCGTCTGCAGGTGCTGTCTGTCTGGCTTGGGCAGGGTTGGGCGAGGAGGAGGGTCCTaGAATCTGAGGCGCCGTGGG +
Preference number: 2 (lower is better)
Translates to: VQSPCVCRCCLSGLGRVGRGGGS*NLRRRG
Trigger: CCCACGGCGCCTCAGATTTCAGGACCCTCCTCCTCG...CCCAACCCTGCCCAAGCCAGACAGACAGCACCTGCAGACGCAGGGGGACTGCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
3UTR-3UTR CCA 90 bp GTTGGTCCAGGTCCAGAAGTGAGCCTTGTGCTGCCCGAGGGTGGCCGCCATCAGCAATGGCCCTGTCGCTaGGCGGCGTCAGGCCCGCAA +
Preference number: 2 (lower is better)
Translates to: VGPGPEVSLVLPEGGRHQQWPCR*AASGPQ
Trigger: TTGCGGGCCTGACGCCGCCCAGCGACAGGGCCATTG...CTGATGGCGGCCACCCTCGGGCAGCACAAGGCTCACTTCTGGACCTGGACCAAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
3UTR-3UTR TCA 90 bp GTATCCCCAGCCACCTCAGGCACCTGTTGTCAGGACCTCCTGAGGCTGTCACAGGAGACGGCAGGGTCCTaGGGTCTGAGGCGCCGTGGG +
Preference number: 2 (lower is better)
Translates to: VSPATSGTCCQDLLRLSQETAGS*GLRRRG
Trigger: CCCACGGCGCCTCAGACCTCAGGACCCTGCCGTCTC...CTGTGACAGCCTCAGGAGGTCCTGACAACAGGTGCCTGAGGTGGCTGGGGATAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
3UTR-3UTR TCA 90 bp GCTGAGCGACACCGACGGCCCAAAACTGTCTGGTACTCGGTGTCGTCCCAGTCCCCTCCAGGCTGGCTGTaGCCCCTGACCCCGCACTTG +
Preference number: 2 (lower is better)
Translates to: AERHRRPKTVWYSVSSQSPPGWL*PLTPHL
Trigger: CAAGTGCGGGGTCAGGGGTCACAGCCAGCCTGGAGG...GGACTGGGACGACACCGAGTACCAGACAGTTTTGGGCCGTCGGTGTCGCTCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000569433.1
3UTR-3UTR GCA 90 bp CCGTGGCCCCCACTGGTCAGCACAGGTGGGTCTGAAGGCACCTGTCAGGGTCTCGTGTGTCTGGGGTCCTaGACGGTGACCCATGCCCCA +
Preference number: 2 (lower is better)
Translates to: PWPPLVSTGGSEGTCQGLVCLGS*TVTHAP
Trigger: TGGGGCATGGGTCACCGTGCAGGACCCCAGACACAC...GAGACCCTGACAGGTGCCTTCAGACCCACCTGTGCTGACCAGTGGGGGCCACGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000569433.1
3UTR-3UTR CCA 90 bp CAGCCCGGAGGTGCCCAGTTCATGACCGCCCAGTTGCACACGTTGAGCTGGGGCGCTGTCTGTCTGGCTTaGGCAGGGTTGGGGGAGGAC +
Preference number: 2 (lower is better)
Translates to: QPGGAQFMTAQLHTLSWGAVCLA*AGLGED
Trigger: GTCCTCCCCCAACCCTGCCCAAGCCAGACAGACAGC...GCCCCAGCTCAACGTGTGCAACTGGGCGGTCATGAACTGGGCACCTCCGGGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
3UTR-3UTR CCA 90 bp GAGGAGGTTGAGGCCATCAATGGCCCTGTCGCTGGGCGGCGTCAGGCCCGCAAGGCCAGGGTCAGGTCCTaGGCAGGTGGAATTGTGCAG +
Preference number: 2 (lower is better)
Translates to: EEVEAINGPVAGRRQARKARVRS*AGGIVQ
Trigger: CTGCACAATTCCACCTGCCCAGGACCTGACCCTGGC...CTTGCGGGCCTGACGCCGCCCAGCGACAGGGCCATTGATGGCCTCAACCTCCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567525.5
3UTR-3UTR TCA 90 bp CCGTGGCCCCCACTGGTCAGCACAGGTGGGTCTGAAGGCACCTGTCAGGGTCTCAGGCAGGCTCATTCCTaGGTCTCCAGGTGGCTCCCA +
Preference number: 2 (lower is better)
Translates to: PWPPLVSTGGSEGTCQGLRQAHS*VSRWLP
Trigger: TGGGAGCCACCTGGAGACTCAGGAATGAGCCTGCCT...GAGACCCTGACAGGTGCCTTCAGACCCACCTGTGCTGACCAGTGGGGGCCACGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569433.1
3UTR-3UTR GCA 90 bp TGGCCCCCACTGGTCAGCACAGGTGGGTCTGAAGGCACCTGTCAGGGTCTCTGCCTGCACGGTGACCCATaGCCCAGGCAGGCTCATTCC +
Preference number: 2 (lower is better)
Translates to: WPPLVSTGGSEGTCQGLCLHGDP*PRQAHS
Trigger: GGAATGAGCCTGCCTGGGGCATGGGTCACCGTGCAG...GCAGAGACCCTGACAGGTGCCTTCAGACCCACCTGTGCTGACCAGTGGGGGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569433.1
3UTR-3UTR CCA 90 bp CTCTCCCCTGGGTCCCGTCCCAGGTGGAAGATCAGGGGCAGCTTCGTGTGGTCTGCTGTCTGTCTGGCTTaGGCAGGGTTGGGGGAGGAC +
Preference number: 2 (lower is better)
Translates to: LSPGSRPRWKIRGSFVWSAVCLA*AGLGED
Trigger: GTCCTCCCCCAACCCTGCCCAAGCCAGACAGACAGC...AGACCACACGAAGCTGCCCCTGATCTTCCACCTGGGACGGGACCCAGGGGAGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
3UTR-3UTR CCA 90 bp GCCCGTGGCCCCCACTGGTCAGCACAGGTGGGTCTGAAGGCACCTGTCAGGGTCCGGCCCAAAACTGTCTaGTACTCGGTGTCGTCCCAG +
Preference number: 2 (lower is better)
Translates to: ARGPHWSAQVGLKAPVRVRPKTV*YSVSSQ
Trigger: CTGGGACGACACCGAGTACCAGACAGTTTTGGGCCG...GACCCTGACAGGTGCCTTCAGACCCACCTGTGCTGACCAGTGGGGGCCACGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569433.1
3UTR CAA 90 bp CCGTTGCTGCCACCTTGTTCGGGGGCGGAAATGAGGGCAGCGCCGTaGTCCGACGTGAAGAAGACGAAGGTGTTGTCCGCGACGTGCAGG +
Preference number: 2 (lower is better)
Translates to: PLLPPCSGAEMRAAP*SDVKKTKVLSATCR
Trigger: CCTGCACGTCGCGGACAACACCTTCGTCTTCTTCACGTCGGACAACGGCGCTGCCCTCATTTCCGCCCCCGAACAAGGTGGCAGCAACGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
3UTR-3UTR TCA 90 bp GGGAACCTCTCCCCTGGGTCCCGTCCCAGGTGGAAGATCAGGGGCAGCTTCGTGGTTGTCAGGACCTCCTaGGGCTGTCACAGGTGCATC +
Preference number: 2 (lower is better)
Translates to: GNLSPGSRPRWKIRGSFVVVRTS*GCHRCI
Trigger: GATGCACCTGTGACAGCCTCAGGAGGTCCTGACAAC...CACGAAGCTGCCCCTGATCTTCCACCTGGGACGGGACCCAGGGGAGAGGTTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567525.5
3UTR-3UTR TCA 90 bp TGCTGTCATCAATCTCCCGGACGGCGTCTCCATACCGCCCTCGCTGACTGGTGCTGGAACTGGGGCCTGTaGCCCAGATGCCACTTGCCG +
Preference number: 2 (lower is better)
Translates to: CCHQSPGRRLHTALADWCWNWGL*PRCHLP
Trigger: CGGCAAGTGGCATCTGGGTCACAGGCCCCAGTTCCA...GCACCAGTCAGCGAGGGCGGTATGGAGACGCCGTCCGGGAGATTGATGACAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568613.5
3UTR-3UTR GCA 90 bp CGAGTCTGGGATGCCGCCCACAATCTCCTGCGGTGTGTAGGCGTTTCTGGCATGCCGTCCTGTGAGCAGTaGCGCCCTCGATGGCGAGCA +
Preference number: 2 (lower is better)
Translates to: RVWDAAHNLLRCVGVSGMPSCEQ*RPRWRA
Trigger: TGCTCGCCATCGAGGGCGGCACTGCTCACAGGACGG...CATGCCAGAAACGCCTACACACCGCAGGAGATTGTGGGCGGCATCCCAGACTCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568613.5
3UTR-3UTR GCA 90 bp AGGCTGGTGGTGAAGAGGTCCATGATGCTGCCCAGCTGGTGGCTCACCTGGCCTGCTCCGAGTCTGGGATaGCGCCCACAATCTCCTGCG +
Preference number: 2 (lower is better)
Translates to: RLVVKRSMMLPSWWLTWPAPSLG*RPQSPA
Trigger: CGCAGGAGATTGTGGGCGGCATCCCAGACTCGGAGC...AGGCCAGGTGAGCCACCAGCTGGGCAGCATCATGGACCTCTTCACCACCAGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568613.5
3UTR-3UTR CCA 90 bp TGCTGTCATCAATCTCCCGGACGGCGTCTCCATACCGCCCTCGCTGACTGGTGCCAGGTGCTGTCTGTCTaGCTTGGGCAGGGTTGGGGG +
Preference number: 2 (lower is better)
Translates to: CCHQSPGRRLHTALADWCQVLSV*LGQGWG
Trigger: CCCCCAACCCTGCCCAAGCCAGACAGACAGCACCTG...GCACCAGTCAGCGAGGGCGGTATGGAGACGCCGTCCGGGAGATTGATGACAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567525.5
3UTR-3UTR CCA 90 bp CAGTTCATGACCGCCCAGTTGCACACGTTGAGCTGGGGCTGCGCGGGGACCAAGCAGGTCCTGGGCAGGTaGAATTGTGCAGTCCCCCTG +
Preference number: 2 (lower is better)
Translates to: QFMTAQLHTLSWGCAGTKQVLGR*NCAVPL
Trigger: CAGGGGGACTGCACAATTCCACCTGCCCAGGACCTG...CTTGGTCCCCGCGCAGCCCCAGCTCAACGTGTGCAACTGGGCGGTCATGAACTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000567525.5
3UTR-3UTR CCA 90 bp GCTGCCACCTTGTTCGGGGGCGGAAATGAGGGCAGCGCCGTTGTCCGACGTGAAGAGCTGCTCCGAGTCTaGGATGCCGCCCACAATCTC +
Preference number: 2 (lower is better)
Translates to: AATLFGGGNEGSAVVRREELLRV*DAAHNL
Trigger: GAGATTGTGGGCGGCATCCCAGACTCGGAGCAGCTC...TTCACGTCGGACAACGGCGCTGCCCTCATTTCCGCCCCCGAACAAGGTGGCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568613.5
3UTR-3UTR TCA 90 bp ATTGTGCAGTCCCCCTGCGTCTGCAGGTGCTGTCTGTCTGGCTTGGGCAGGGTTGGGTTCACAAAGGCGTaGGACGGCAGGGTCCTGAGG +
Preference number: 2 (lower is better)
Translates to: IVQSPCVCRCCLSGLGRVGFTKA*DGRVLR
Trigger: CCTCAGGACCCTGCCGTCTCACGCCTTTGTGAACCC...AACCCTGCCCAAGCCAGACAGACAGCACCTGCAGACGCAGGGGGACTGCACAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
3UTR-3UTR TCA 90 bp GACGTGAAGAAGACGAAGGTGTTGTCCGCGACGTGCAGGTCTTGGAGGAGCTCCTGGGTAGCCGTCCTGTaGGCAGTGCCGCCCTCGATG +
Preference number: 2 (lower is better)
Translates to: DVKKTKVLSATCRSWRSSWVAVL*AVPPSM
Trigger: CATCGAGGGCGGCACTGCTCACAGGACGGCTACCCA...GGAGCTCCTCCAAGACCTGCACGTCGCGGACAACACCTTCGTCTTCTTCACGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568613.5
3UTR-3UTR TCA 90 bp GTGCAGTCCCCCTGCGTCTGCAGGTGCTGTCTGTCTGGCTTGGGCAGGGTTGGGCGCCGTTGTCCGACGTaGAGAAGACGAAGGTGTTGT +
Preference number: 2 (lower is better)
Translates to: VQSPCVCRCCLSGLGRVGRRCPT*RRRRCC
Trigger: ACAACACCTTCGTCTTCTTCACGTCGGACAACGGCG...CCCAACCCTGCCCAAGCCAGACAGACAGCACCTGCAGACGCAGGGGGACTGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567525.5
3UTR-3UTR GCA 90 bp CCCTGGCCACCATGCGAGGGCAGGCTCCCTCATCCCTCCTTCAAACGTGGTCTGCTTCCTCCAGGCACTTaGAGGGCCAACCGGAGATTC +
Preference number: 2 (lower is better)
Translates to: PWPPCEGRLPHPSFKRGLLPPGT*RANRRF
Trigger: GAATCTCCGGTTGGCCCTGCAAGTGCCTGGAGGAAG...CAGACCACGTTTGAAGGAGGGATGAGGGAGCCTGCCCTCGCATGGTGGCCAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
3UTR-3UTR CCA 90 bp GAGGAGGTTGAGGCCATCAATGGCCCTGTCGCTGGGCGGCGTCAGGCCCGCAAGTTCTGGCATGGGCGTTaGTGGTGTAGAAGCCATTGC +
Preference number: 2 (lower is better)
Translates to: EEVEAINGPVAGRRQARKFWHGR*WCRSHC
Trigger: GCAATGGCTTCTACACCACCAACGCCCATGCCAGAA...CTTGCGGGCCTGACGCCGCCCAGCGACAGGGCCATTGATGGCCTCAACCTCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568613.5
3UTR-3UTR CCA 90 bp ATGACCGCCCAGTTGCACACGTTGAGCTGGGGCTGCGCGGGGACCAAGGCCTCCCAGGGATGTTGGGCCTaGCCTTGTTGTCATAAGGTC +
Preference number: 2 (lower is better)
Translates to: MTAQLHTLSWGCAGTKASQGCWA*PCCHKV
Trigger: GACCTTATGACAACAAGGCCAGGCCCAACATCCCTG...GGAGGCCTTGGTCCCCGCGCAGCCCCAGCTCAACGTGTGCAACTGGGCGGTCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568613.5
3UTR-3UTR CCA 90 bp AATTGTGCAGTCCCCCTGCGTCTGCAGGTGCTGTCTGTCTGGCTTGGGCAGGGTAGCTGGTGGCTCACCTaGCCTGCAGTGACGTGCCCT +
Preference number: 2 (lower is better)
Translates to: NCAVPLRLQVLSVWLGQGSWWLT*PAVTCP
Trigger: AGGGCACGTCACTGCAGGCCAGGTGAGCCACCAGCT...ACCCTGCCCAAGCCAGACAGACAGCACCTGCAGACGCAGGGGGACTGCACAATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567525.5
3UTR-3UTR TCA 90 bp GACGTGAAGAAGACGAAGGTGTTGTCCGCGACGTGCAGGTCTTGGAGGAGCTCCCCATACCGCCCTCGCTaGCTGGTGCCCAAGAAGGGT +
Preference number: 2 (lower is better)
Translates to: DVKKTKVLSATCRSWRSSPYRPR*LVPKKG
Trigger: ACCCTTCTTGGGCACCAGTCAGCGAGGGCGGTATGG...GGAGCTCCTCCAAGACCTGCACGTCGCGGACAACACCTTCGTCTTCTTCACGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
3UTR-3UTR TCA 90 bp GCGCAGGTGCTAGTGGGACCAGAGGCACTTCTTGGGAATGGATTCTGGAGGTGTTCACCTGGCCTGCAGTaGCGTGCCCTGGCCACCATG +
Preference number: 2 (lower is better)
Translates to: AQVLVGPEALLGNGFWRCSPGLQ*RALATM
Trigger: CATGGTGGCCAGGGCACGTCACTGCAGGCCAGGTGA...ACACCTCCAGAATCCATTCCCAAGAAGTGCCTCTGGTCCCACTAGCACCTGCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
3UTR-3UTR CCA 90 bp GCAAACTGTATCCCCAGCCACCTCAGGCACCTGTTGTCAGGACCTCCTGAGGCTGCTGTCTGTCTGGCTTaGGCAGGGTTGGGGGAGGAC +
Preference number: 2 (lower is better)
Translates to: ANCIPSHLRHLLSGPPEAAVCLA*AGLGED
Trigger: GTCCTCCCCCAACCCTGCCCAAGCCAGACAGACAGC...AGCCTCAGGAGGTCCTGACAACAGGTGCCTGAGGTGGCTGGGGATACAGTTTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
3UTR-3UTR TCA 90 bp GCTGAGCGACACCGACGGCCCAAAACTGTCTGGTACTCGGTGTCGTCCCAGTCCCCCAGGTGTGGCAGCTaGGGTTCAAGAATGGAAGTG +
Preference number: 2 (lower is better)
Translates to: AERHRRPKTVWYSVSSQSPRCGS*GSRMEV
Trigger: CACTTCCATTCTTGAACCTCAGCTGCCACACCTGGG...GGACTGGGACGACACCGAGTACCAGACAGTTTTGGGCCGTCGGTGTCGCTCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569433.1
3UTR-3UTR GCA 90 bp ATTGTGCAGTCCCCCTGCGTCTGCAGGTGCTGTCTGTCTGGCTTGGGCAGGGTTCTTCCTCCAGGCACTTaGAGGGCCAACCGGAGATTC +
Preference number: 2 (lower is better)
Translates to: IVQSPCVCRCCLSGLGRVLPPGT*RANRRF
Trigger: GAATCTCCGGTTGGCCCTGCAAGTGCCTGGAGGAAG...AACCCTGCCCAAGCCAGACAGACAGCACCTGCAGACGCAGGGGGACTGCACAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
3UTR-3UTR GCA 90 bp GGGAACCTCTCCCCTGGGTCCCGTCCCAGGTGGAAGATCAGGGGCAGCTTCGTGAGGAAAAAGGGGTGGTaGCGTGCCTGTCTCTTAATG +
Preference number: 2 (lower is better)
Translates to: GNLSPGSRPRWKIRGSFVRKKGW*RACLLM
Trigger: CATTAAGAGACAGGCACGGCACCACCCCTTTTTCCT...CACGAAGCTGCCCCTGATCTTCCACCTGGGACGGGACCCAGGGGAGAGGTTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
3UTR-3UTR GCA 90 bp GGACAAAGGACAGACGGAACTGGAAGTCATCCCTCTGGGGCTCCCCTGAGACAAACCAAGGCCTCCTGGTaGTGCTGGACGACCGAGGTG +
Preference number: 2 (lower is better)
Translates to: GQRTDGTGSHPSGAPLRQTKASW*CWTTEV
Trigger: CACCTCGGTCGTCCAGCAGCACCAGGAGGCCTTGGT...TTGTCTCAGGGGAGCCCCAGAGGGATGACTTCCAGTTCCGTCTGTCCTTTGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567525.5
3UTR-3UTR CCA 90 bp AGGCAAACTGTATCCCCAGCCACCTCAGGCACCTGTTGTCAGGACCTCCTGAGGGCCAGGGTCAGGTCCTaGGCAGGTGGAATTGTGCAG +
Preference number: 2 (lower is better)
Translates to: RQTVSPATSGTCCQDLLRARVRS*AGGIVQ
Trigger: CTGCACAATTCCACCTGCCCAGGACCTGACCCTGGC...CCTCAGGAGGTCCTGACAACAGGTGCCTGAGGTGGCTGGGGATACAGTTTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
3UTR CAA 90 bp GTGCCGCCCTCGATGGCGAGCACAGAGGGTTGGCAGAATAGAAGTTaGGGAAAAGCAGCCCTTCTGCAGCCATCCGGTCCAAATTCGGGG +
Preference number: 2 (lower is better)
Translates to: VPPSMASTEGWQNRS*GKAALLQPSGPNSG
Trigger: CCCCGAATTTGGACCGGATGGCTGCAGAAGGGCTGCTTTTCCCAAACTTCTATTCTGCCAACCCTCTGTGCTCGCCATCGAGGGCGGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568613.5
3UTR-3UTR TCA 90 bp GCGTCCAGGGAAATTCCTTGTGGACAAAGGACAGACGGAACTGGAAGTCATCCCCGAGGAGGAGGGTCCTaGAATCTGAGGCGCCGTGGG +
Preference number: 2 (lower is better)
Translates to: ASREIPCGQRTDGTGSHPRGGGS*NLRRRG
Trigger: CCCACGGCGCCTCAGATTTCAGGACCCTCCTCCTCG...GGGATGACTTCCAGTTCCGTCTGTCCTTTGTCCACAAGGAATTTCCCTGGACGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
3UTR-3UTR TCA 90 bp GCGCAGGTGCTAGTGGGACCAGAGGCACTTCTTGGGAATGGATTCTGGAGGTGTGCAGGTAGATCTGGGTaGGGTTGGCTTCCCCCGTCT +
Preference number: 2 (lower is better)
Translates to: AQVLVGPEALLGNGFWRCAGRSG*GWLPPS
Trigger: AGACGGGGGAAGCCAACCTCACCCAGATCTACCTGC...ACACCTCCAGAATCCATTCCCAAGAAGTGCCTCTGGTCCCACTAGCACCTGCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
3UTR-3UTR TCA 90 bp CAGTTCATGACCGCCCAGTTGCACACGTTGAGCTGGGGCTGCGCGGGGACCAAGAATCAATGCCCTGTCTaGAGTTCTCCCAGGAGTTGG +
Preference number: 2 (lower is better)
Translates to: QFMTAQLHTLSWGCAGTKNQCPV*SSPRSW
Trigger: CCAACTCCTGGGAGAACTTCAGACAGGGCATTGATT...CTTGGTCCCCGCGCAGCCCCAGCTCAACGTGTGCAACTGGGCGGTCATGAACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
3UTR-3UTR TCA 90 bp TGGCCTGAGTCTGCGCAGGTGCTAGTGGGACCAGAGGCACTTCTTGGGAATGGAGTGAGTTGTGACCCCTaGAACGTTCTGCCCAGGGCA +
Preference number: 2 (lower is better)
Translates to: WPESAQVLVGPEALLGNGVSCDP*NVLPRA
Trigger: TGCCCTGGGCAGAACGTTTCAGGGGTCACAACTCAC...TCCATTCCCAAGAAGTGCCTCTGGTCCCACTAGCACCTGCGCAGACTCAGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
3UTR-3UTR GCA 90 bp GTGGAAGATCAGGGGCAGCTTCGTGTGGTCTTCCAGATTGTGAGTTGTGACCCCCAGTCCCCCTGCGTCTaGAGGTGCTGTCTGTCTGGC +
Preference number: 2 (lower is better)
Translates to: VEDQGQLRVVFQIVSCDPQSPCV*RCCLSG
Trigger: GCCAGACAGACAGCACCTGCAGACGCAGGGGGACTG...GGGGTCACAACTCACAATCTGGAAGACCACACGAAGCTGCCCCTGATCTTCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000567525.5
3UTR-3UTR GCA 90 bp TGTCATCAATCTCCCGGACGGCGTCTCCATACCGCCCTCGCTGACTGGTGCCCACACTCATCAAATCCGTaGTTCAGGGGGTGGAACTGG +
Preference number: 2 (lower is better)
Translates to: CHQSPGRRLHTALADWCPHSSNP*FRGWNW
Trigger: CCAGTTCCACCCCCTGAAGCACGGATTTGATGAGTG...TGGGCACCAGTCAGCGAGGGCGGTATGGAGACGCCGTCCGGGAGATTGATGACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568613.5
3UTR-3UTR CCA 90 bp GGACAAAGGACAGACGGAACTGGAAGTCATCCCTCTGGGGCTCCCCTGAGACAACAGGTCCTGGGCAGGTaGAATTGTGCAGTCCCCCTG +
Preference number: 2 (lower is better)
Translates to: GQRTDGTGSHPSGAPLRQQVLGR*NCAVPL
Trigger: CAGGGGGACTGCACAATTCCACCTGCCCAGGACCTG...TTGTCTCAGGGGAGCCCCAGAGGGATGACTTCCAGTTCCGTCTGTCCTTTGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
3UTR-3UTR CCA 90 bp CCGGACGGCGTCTCCATACCGCCCTCGCTGACTGGTGCCCAAGAAGGGTTTGGAGTCCAAAGTGGCAGTTaGGGGATCCAAACCACTCAT +
Preference number: 2 (lower is better)
Translates to: PDGVSIPPSLTGAQEGFGVQSGS*GIQTTH
Trigger: ATGAGTGGTTTGGATCCCCCAACTGCCACTTTGGAC...TCCAAACCCTTCTTGGGCACCAGTCAGCGAGGGCGGTATGGAGACGCCGTCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568613.5
3UTR-3UTR CCA 90 bp TGTTCGGGGGCGGAAATGAGGGCAGCGCCGTTGTCCGACGTGAAGAAGACGAAGTGCCCAAGAAGGGTTTaGAGGCATAGACGGGTGCGT +
Preference number: 2 (lower is better)
Translates to: CSGAEMRAAPLSDVKKTKCPRRV*RHRRVR
Trigger: ACGCACCCGTCTATGCCTCCAAACCCTTCTTGGGCA...CTTCGTCTTCTTCACGTCGGACAACGGCGCTGCCCTCATTTCCGCCCCCGAACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
3UTR-3UTR CCA 90 bp TTGTCCGACGTGAAGAAGACGAAGGTGTTGTCCGCGACGTGCAGGTCTTGGAGGACCGCCCTCGCTGACTaGTGCCCAAGAAGGGTTTGG +
Preference number: 2 (lower is better)
Translates to: LSDVKKTKVLSATCRSWRTALAD*CPRRVW
Trigger: CCAAACCCTTCTTGGGCACCAGTCAGCGAGGGCGGT...CCTCCAAGACCTGCACGTCGCGGACAACACCTTCGTCTTCTTCACGTCGGACAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
3UTR-3UTR CCA 90 bp GGTGCTAGTGGGACCAGAGGCACTTCTTGGGAATGGATTCTGGAGGTGTCAGACGGGTCCCGTCCCAGGTaGAAGATCAGGGGCAGCTTC +
Preference number: 2 (lower is better)
Translates to: GASGTRGTSWEWILEVSDGSRPR*KIRGSF
Trigger: GAAGCTGCCCCTGATCTTCCACCTGGGACGGGACCC...GTCTGACACCTCCAGAATCCATTCCCAAGAAGTGCCTCTGGTCCCACTAGCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
3UTR CAA 90 bp GAAATGAGGGCAGCGCCGTTGTCCGACGTGAAGAAGACGAAGGTGTaGTCCGCGACGTGCAGGTCTTGGAGGAGCTCCAGTATCTTCCCA +
Preference number: 2 (lower is better)
Translates to: EMRAAPLSDVKKTKV*SATCRSWRSSSIFP
Trigger: TGGGAAGATACTGGAGCTCCTCCAAGACCTGCACGTCGCGGACAACACCTTCGTCTTCTTCACGTCGGACAACGGCGCTGCCCTCATTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
3UTR-3UTR CCA 90 bp GCGTCCAGGGAAATTCCTTGTGGACAAAGGACAGACGGAACTGGAAGTCATCCCCAGGTGCTGTCTGTCTaGCTTGGGCAGGGTTGGGGG +
Preference number: 2 (lower is better)
Translates to: ASREIPCGQRTDGTGSHPQVLSV*LGQGWG
Trigger: CCCCCAACCCTGCCCAAGCCAGACAGACAGCACCTG...GGGATGACTTCCAGTTCCGTCTGTCCTTTGTCCACAAGGAATTTCCCTGGACGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
3UTR-3UTR CCA 90 bp TGTCATCAATCTCCCGGACGGCGTCTCCATACCGCCCTCGCTGACTGGTGCCCAGCGAGCACAGAGGGTTaGCAGAATAGAAGTTTGGGA +
Preference number: 2 (lower is better)
Translates to: CHQSPGRRLHTALADWCPASTEG*QNRSLG
Trigger: TCCCAAACTTCTATTCTGCCAACCCTCTGTGCTCGC...TGGGCACCAGTCAGCGAGGGCGGTATGGAGACGCCGTCCGGGAGATTGATGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568613.5
3UTR-3UTR CCA 90 bp GACGTGAAGAAGACGAAGGTGTTGTCCGCGACGTGCAGGTCTTGGAGGAGCTCCTGGCATGGGCGTTGGTaGTGTAGAAGCCATTGCGGA +
Preference number: 2 (lower is better)
Translates to: DVKKTKVLSATCRSWRSSWHGRW*CRSHCG
Trigger: TCCGCAATGGCTTCTACACCACCAACGCCCATGCCA...GGAGCTCCTCCAAGACCTGCACGTCGCGGACAACACCTTCGTCTTCTTCACGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568613.5
3UTR-3UTR CCA 90 bp GACGTGAAGAAGACGAAGGTGTTGTCCGCGACGTGCAGGTCTTGGAGGAGCTCCGTGTGTAGGCGTTTCTaGCATGGGCGTTGGTGGTGT +
Preference number: 2 (lower is better)
Translates to: DVKKTKVLSATCRSWRSSVCRRF*HGRWWC
Trigger: ACACCACCAACGCCCATGCCAGAAACGCCTACACAC...GGAGCTCCTCCAAGACCTGCACGTCGCGGACAACACCTTCGTCTTCTTCACGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568613.5
3UTR-3UTR CCA 90 bp GACGTGAAGAAGACGAAGGTGTTGTCCGCGACGTGCAGGTCTTGGAGGAGCTCCTGCCCAAGAAGGGTTTaGAGGCATAGACGGGTGCGT +
Preference number: 2 (lower is better)
Translates to: DVKKTKVLSATCRSWRSSCPRRV*RHRRVR
Trigger: ACGCACCCGTCTATGCCTCCAAACCCTTCTTGGGCA...GGAGCTCCTCCAAGACCTGCACGTCGCGGACAACACCTTCGTCTTCTTCACGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
3UTR-3UTR TCA 90 bp CTAGTGGGACCAGAGGCACTTCTTGGGAATGGATTCTGGAGGTGTCAGACACTTGGGTGGGGAGGAGGTTaGGGCCATCAATGGCCCTGT +
Preference number: 2 (lower is better)
Translates to: LVGPEALLGNGFWRCQTLGWGGG*GHQWPC
Trigger: ACAGGGCCATTGATGGCCTCAACCTCCTCCCCACCC...AAGTGTCTGACACCTCCAGAATCCATTCCCAAGAAGTGCCTCTGGTCCCACTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
3UTR-3UTR GCA 90 bp ATAAAGGCAAACTGTATCCCCAGCCACCTCAGGCACCTGTTGTCAGGACCTCCTGGGCAGGTGGAATTGTaGAGTCCCCCTGCGTCTGCA +
Preference number: 2 (lower is better)
Translates to: IKANCIPSHLRHLLSGPPGQVEL*SPPASA
Trigger: TGCAGACGCAGGGGGACTGCACAATTCCACCTGCCC...AGGAGGTCCTGACAACAGGTGCCTGAGGTGGCTGGGGATACAGTTTGCCTTTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
3UTR-3UTR GCA 90 bp TGTTCGGGGGCGGAAATGAGGGCAGCGCCGTTGTCCGACGTGAAGAAGACGAAGAAAGGGGTGGTGCCGTaGCTGTCTCTTAATGAAGTC +
Preference number: 2 (lower is better)
Translates to: CSGAEMRAAPLSDVKKTKKGVVP*LSLNEV
Trigger: GACTTCATTAAGAGACAGGCACGGCACCACCCCTTT...CTTCGTCTTCTTCACGTCGGACAACGGCGCTGCCCTCATTTCCGCCCCCGAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
3UTR-3UTR CCA 90 bp GCGCAGGTGCTAGTGGGACCAGAGGCACTTCTTGGGAATGGATTCTGGAGGTGTAATTCGGGGTCTCTCTaGAGGGCTCTCCATACACCC +
Preference number: 2 (lower is better)
Translates to: AQVLVGPEALLGNGFWRCNSGSL*RALHTP
Trigger: GGGTGTATGGAGAGCCCTCCAGAGAGACCCCGAATT...ACACCTCCAGAATCCATTCCCAAGAAGTGCCTCTGGTCCCACTAGCACCTGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568613.5
3UTR-3UTR CCA 90 bp TTCTTGGGAATGGATTCTGGAGGTGTCAGACACTTCCCTAACTTTTCACAGCCCCAATGGCCCTGTCGCTaGGCGGCGTCAGGCCCGCAA +
Preference number: 2 (lower is better)
Translates to: FLGMDSGGVRHFPNFSQPQWPCR*AASGPQ
Trigger: TTGCGGGCCTGACGCCGCCCAGCGACAGGGCCATTG...GGGCTGTGAAAAGTTAGGGAAGTGTCTGACACCTCCAGAATCCATTCCCAAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
3UTR CAA 90 bp GTCCGACGTGAAGAAGACGAAGGTGTTGTCCGCGACGTGCAGGTCTaGGAGGAGCTCCAGTATCTTCCCAATGCTGTCATCAATCTCCCG +
Preference number: 2 (lower is better)
Translates to: VRREEDEGVVRDVQV*EELQYLPNAVINLP
Trigger: CGGGAGATTGATGACAGCATTGGGAAGATACTGGAGCTCCTCCAAGACCTGCACGTCGCGGACAACACCTTCGTCTTCTTCACGTCGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
3UTR-3UTR GCA 90 bp CTAGTGGGACCAGAGGCACTTCTTGGGAATGGATTCTGGAGGTGTCAGACACTTACAGAAAGGGGCCGTTaGTGCCACCTTGTTCGGGGG +
Preference number: 2 (lower is better)
Translates to: LVGPEALLGNGFWRCQTLTERGR*CHLVRG
Trigger: CCCCCGAACAAGGTGGCAGCAACGGCCCCTTTCTGT...AAGTGTCTGACACCTCCAGAATCCATTCCCAAGAAGTGCCTCTGGTCCCACTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
3UTR-3UTR GCA 90 bp CTAGTGGGACCAGAGGCACTTCTTGGGAATGGATTCTGGAGGTGTCAGACACTTCTTCCTCCAGGCACTTaGAGGGCCAACCGGAGATTC +
Preference number: 2 (lower is better)
Translates to: LVGPEALLGNGFWRCQTLLPPGT*RANRRF
Trigger: GAATCTCCGGTTGGCCCTGCAAGTGCCTGGAGGAAG...AAGTGTCTGACACCTCCAGAATCCATTCCCAAGAAGTGCCTCTGGTCCCACTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
3UTR-3UTR GCA 90 bp GCCCCGTTCCCTTACTGTTTACATAAAAATGCGGATTCACTGGGCCAGACTCAACAGTCCCCCTGCGTCTaGAGGTGCTGTCTGTCTGGC +
Preference number: 2 (lower is better)
Translates to: APFPYCLHKNADSLGQTQQSPCV*RCCLSG
Trigger: GCCAGACAGACAGCACCTGCAGACGCAGGGGGACTG...TTGAGTCTGGCCCAGTGAATCCGCATTTTTATGTAAACAGTAAGGGAACGGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
3UTR-3UTR GCA 90 bp CAGGGTCAGGTCCTGGGCAGGTGGAATTGTGCAGTCCCCCTGCGTCTGCAGGTGAAACGCTTATATGATTaGCCCGTTCCCTTACTGTTT +
Preference number: 2 (lower is better)
Translates to: QGQVLGRWNCAVPLRLQVKRLYD*PVPLLF
Trigger: AAACAGTAAGGGAACGGGGCAATCATATAAGCGTTT...CACCTGCAGACGCAGGGGGACTGCACAATTCCACCTGCCCAGGACCTGACCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
3UTR-3UTR GCA 90 bp TTGTCCGACGTGAAGAAGACGAAGGTGTTGTCCGCGACGTGCAGGTCTTGGAGGAGGAAAAAGGGGTGGTaGCGTGCCTGTCTCTTAATG +
Preference number: 2 (lower is better)
Translates to: LSDVKKTKVLSATCRSWRRKKGW*RACLLM
Trigger: CATTAAGAGACAGGCACGGCACCACCCCTTTTTCCT...CCTCCAAGACCTGCACGTCGCGGACAACACCTTCGTCTTCTTCACGTCGGACAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
3UTR-3UTR GCA 90 bp AGAGGCACTTCTTGGGAATGGATTCTGGAGGTGTCAGACACTTCCCTAACTTTTTGGCCTGCAGTGACGTaGCCTGGCCACCATGCGAGG +
Preference number: 2 (lower is better)
Translates to: RGTSWEWILEVSDTSLTFWPAVT*PGHHAR
Trigger: CCTCGCATGGTGGCCAGGGCACGTCACTGCAGGCCA...AAAAGTTAGGGAAGTGTCTGACACCTCCAGAATCCATTCCCAAGAAGTGCCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
3UTR-3UTR GCA 90 bp TGGATTCTGGAGGTGTCAGACACTTCCCTAACTTTTCACAGCCCGGAGGTGCCCAAAGGGGTGGTGCCGTaGCTGTCTCTTAATGAAGTC +
Preference number: 2 (lower is better)
Translates to: WILEVSDTSLTFHSPEVPKGVVP*LSLNEV
Trigger: GACTTCATTAAGAGACAGGCACGGCACCACCCCTTT...GGGCACCTCCGGGCTGTGAAAAGTTAGGGAAGTGTCTGACACCTCCAGAATCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
3UTR CAA 90 bp AGATGTATAAAGGCAAACTGTATCCCCAGCCACCTCAGGCACCTGTaGTCAGGACCTCCTGAGGCTGTCACAGGTGCATCCTTAACCTTG +
Preference number: 2 (lower is better)
Translates to: RCIKANCIPSHLRHL*SGPPEAVTGASLTL
Trigger: CAAGGTTAAGGATGCACCTGTGACAGCCTCAGGAGGTCCTGACAACAGGTGCCTGAGGTGGCTGGGGATACAGTTTGCCTTTATACATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
3UTR CAA 90 bp AAGAAGCTACACGCCTCCCTCATAATTAGCGTCCAGGGAAATTCCTaGTGGACAAAGGACAGACGGAACTGGAAGTCATCCCTCTGGGGC +
Preference number: 2 (lower is better)
Translates to: KKLHASLIISVQGNS*WTKDRRNWKSSLWG
Trigger: GCCCCAGAGGGATGACTTCCAGTTCCGTCTGTCCTTTGTCCACAAGGAATTTCCCTGGACGCTAATTATGAGGGAGGCGTGTAGCTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
3UTR-3UTR TCA 90 bp TTCTTGGGAATGGATTCTGGAGGTGTCAGACACTTCCCTAACTTTTCACAGCCCGTGAGTTGTGACCCCTaGAACGTTCTGCCCAGGGCA +
Preference number: 2 (lower is better)
Translates to: FLGMDSGGVRHFPNFSQPVSCDP*NVLPRA
Trigger: TGCCCTGGGCAGAACGTTTCAGGGGTCACAACTCAC...GGGCTGTGAAAAGTTAGGGAAGTGTCTGACACCTCCAGAATCCATTCCCAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
3UTR-3UTR CCA 90 bp CTCCCTAAGATGTATAAAGGCAAACTGTATCCCCAGCCACCTCAGGCACCTGTTGCGACGTGCAGGTCTTaGAGGAGCTCCAGTATCTTC +
Preference number: 2 (lower is better)
Translates to: LPKMYKGKLYPQPPQAPVATCRS*RSSSIF
Trigger: GAAGATACTGGAGCTCCTCCAAGACCTGCACGTCGC...AACAGGTGCCTGAGGTGGCTGGGGATACAGTTTGCCTTTATACATCTTAGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567525.5
3UTR-3UTR GCA 90 bp TTGTCCGACGTGAAGAAGACGAAGGTGTTGTCCGCGACGTGCAGGTCTTGGAGGATTCTTCATAATATCTaGCAACCATCTCCCAGTCCC +
Preference number: 2 (lower is better)
Translates to: LSDVKKTKVLSATCRSWRILHNI*QPSPSP
Trigger: GGGACTGGGAGATGGTTGGCAGATATTATGAAGAAT...CCTCCAAGACCTGCACGTCGCGGACAACACCTTCGTCTTCTTCACGTCGGACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568613.5
3UTR-3UTR CCA 90 bp ATACTGATCTTGTGTCTCCCTAAGATGTATAAAGGCAAACTGTATCCCCAGCCAAGACGGGTGCGTGCGTaGCGTCGACAGCCCAGTAGA +
Preference number: 2 (lower is better)
Translates to: ILILCLPKMYKGKLYPQPRRVRA*RRQPSR
Trigger: TCTACTGGGCTGTCGACGCCACGCACGCACCCGTCT...TGGCTGGGGATACAGTTTGCCTTTATACATCTTAGGGAGACACAAGATCAGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567525.5
3UTR-3UTR CCA 90 bp AGCGTCCAGGGAAATTCCTTGTGGACAAAGGACAGACGGAACTGGAAGTCATCCCTGGTCTCAGATATTTaGGGTTCACAAAGGCGTGAG +
Preference number: 2 (lower is better)
Translates to: SVQGNSLWTKDRRNWKSSLVSDI*GSQRRE
Trigger: CTCACGCCTTTGTGAACCCCAAATATCTGAGACCAG...GGATGACTTCCAGTTCCGTCTGTCCTTTGTCCACAAGGAATTTCCCTGGACGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
3UTR-3UTR CCA 90 bp TTCTTGGGAATGGATTCTGGAGGTGTCAGACACTTCCCTAACTTTTCACAGCCCTCCCTCCTTCAAACGTaGTCTGCTTCCCACACAGAA +
Preference number: 2 (lower is better)
Translates to: FLGMDSGGVRHFPNFSQPSLLQT*SASHTE
Trigger: TTCTGTGTGGGAAGCAGACCACGTTTGAAGGAGGGA...GGGCTGTGAAAAGTTAGGGAAGTGTCTGACACCTCCAGAATCCATTCCCAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
3UTR-3UTR CCA 90 bp AGAGGCACTTCTTGGGAATGGATTCTGGAGGTGTCAGACACTTCCCTAACTTTTTGTACACAGGGATGTTaGGCCTGGCCTTGTTGTCAT +
Preference number: 2 (lower is better)
Translates to: RGTSWEWILEVSDTSLTFCTQGC*AWPCCH
Trigger: ATGACAACAAGGCCAGGCCCAACATCCCTGTGTACA...AAAAGTTAGGGAAGTGTCTGACACCTCCAGAATCCATTCCCAAGAAGTGCCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568613.5
3UTR-3UTR CCA 90 bp AGAGGCACTTCTTGGGAATGGATTCTGGAGGTGTCAGACACTTCCCTAACTTTTCTGGTCTCAGATATTTaGGGTTCACAAAGGCGTGAG +
Preference number: 2 (lower is better)
Translates to: RGTSWEWILEVSDTSLTFLVSDI*GSQRRE
Trigger: CTCACGCCTTTGTGAACCCCAAATATCTGAGACCAG...AAAAGTTAGGGAAGTGTCTGACACCTCCAGAATCCATTCCCAAGAAGTGCCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567525.5
3UTR CAA 90 bp AGTGGAAGGCTGACTGAACCAATGTACGCCATACACATACTGATCTaGTGTCTCCCTAAGATGTATAAAGGCAAACTGTATCCCCAGCCA +
Preference number: 2 (lower is better)
Translates to: SGRLTEPMYAIHILI*CLPKMYKGKLYPQP
Trigger: TGGCTGGGGATACAGTTTGCCTTTATACATCTTAGGGAGACACAAGATCAGTATGTGTATGGCGTACATTGGTTCAGTCAGCCTTCCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
3UTR-3UTR GCA 90 bp ATACTGATCTTGTGTCTCCCTAAGATGTATAAAGGCAAACTGTATCCCCAGCCAACCCCTGAAACGTTCTaGCCAGGGCAGAAATCAATG +
Preference number: 2 (lower is better)
Translates to: ILILCLPKMYKGKLYPQPTPETF*PGQKSM
Trigger: CATTGATTTCTGCCCTGGGCAGAACGTTTCAGGGGT...TGGCTGGGGATACAGTTTGCCTTTATACATCTTAGGGAGACACAAGATCAGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567525.5
3UTR CCA 72 bp TGGGGCTGCGCGGGGACCAAGGCCTCCTGGTGCTGCTaGACGACCGAGGTGATCCTGCTGAGGGCCTCCTGG +
Preference number: 3 (lower is better)
Translates to: WGCAGTKASWCC*TTEVILLRASW
Trigger: CCAGGAGGCCCTCAGCAGGATCACCTCGGTCGTCCAGCAGCACCAGGAGGCCTTGGTCCCCGCGCAGCCCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
3UTR TCA 72 bp TGGCCCGTGGCCCCCACTGGTCAGCACAGGTGGGTCTaGAGGCACCTGTCAGGGTCTCTGCTGGTCGGAGCC +
Preference number: 3 (lower is better)
Translates to: WPVAPTGQHRWV*RHLSGSLLVGA
Trigger: GGCTCCGACCAGCAGAGACCCTGACAGGTGCCTTCAGACCCACCTGTGCTGACCAGTGGGGGCCACGGGCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569433.1
3UTR CCA 72 bp ACTGCCCAGCCCTTGGGTGTGGCCCGTGGCCCCCACTaGTCAGCACAGGTGGGTCTGAAGGCACCTGTCAGG +
Preference number: 3 (lower is better)
Translates to: TAQPLGVARGPH*SAQVGLKAPVR
Trigger: CCTGACAGGTGCCTTCAGACCCACCTGTGCTGACCAGTGGGGGCCACGGGCCACACCCAAGGGCTGGGCAGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569433.1
3UTR CCA 72 bp GCCCAGTTCATGACCGCCCAGTTGCACACGTTGAGCTaGGGCTGCGCGGGGACCAAGGCCTCCTGGTGCTGC +
Preference number: 3 (lower is better)
Translates to: AQFMTAQLHTLS*GCAGTKASWCC
Trigger: GCAGCACCAGGAGGCCTTGGTCCCCGCGCAGCCCCAGCTCAACGTGTGCAACTGGGCGGTCATGAACTGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
3UTR-3UTR CAA 90 bp GTGGGGAGGAGGTTGAGGCCATCAATGGCCCTGTCGCTGGGCGGCGTCAGGCCCATGAGGGCAGCGCCGTaGTCCGACGTGAAGAAGACG +
Preference number: 3 (lower is better)
Translates to: VGRRLRPSMALSLGGVRPMRAAP*SDVKKT
Trigger: CGTCTTCTTCACGTCGGACAACGGCGCTGCCCTCAT...GGGCCTGACGCCGCCCAGCGACAGGGCCATTGATGGCCTCAACCTCCTCCCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
3UTR CCA 72 bp GAGGAGGAGGGCCAAGCACACGCCAGGGTCAGGTCCTaGGCAGGTGGAATTGTGCAGTCCCCCTGCGTCTGC +
Preference number: 3 (lower is better)
Translates to: EEEGQAHARVRS*AGGIVQSPCVC
Trigger: GCAGACGCAGGGGGACTGCACAATTCCACCTGCCCAGGACCTGACCCTGGCGTGTGCTTGGCCCTCCTCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
3UTR-3UTR CAA 90 bp GAGGGTGGGGAGGAGGTTGAGGCCATCAATGGCCCTGTCGCTGGGCGGCGTCAGCCTTCCTCCAGGCACTaGCAGGGCCAACCGGAGATT +
Preference number: 3 (lower is better)
Translates to: EGGEEVEAINGPVAGRRQPSSRH*QGQPEI
Trigger: AATCTCCGGTTGGCCCTGCAAGTGCCTGGAGGAAGG...CTGACGCCGCCCAGCGACAGGGCCATTGATGGCCTCAACCTCCTCCCCACCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
3UTR-3UTR CAA 90 bp GTGCAGTCCCCCTGCGTCTGCAGGTGCTGTCTGTCTGGCTTGGGCAGGGTTGGGCCTGGGCAGGTGGAATaGTGCAGTCCCCCTGCGTCT +
Preference number: 3 (lower is better)
Translates to: VQSPCVCRCCLSGLGRVGPGQVE*CSPPAS
Trigger: AGACGCAGGGGGACTGCACAATTCCACCTGCCCAGG...CCCAACCCTGCCCAAGCCAGACAGACAGCACCTGCAGACGCAGGGGGACTGCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
3UTR-3UTR CAA 90 bp GTGCAGTCCCCCTGCGTCTGCAGGTGCTGTCTGTCTGGCTTGGGCAGGGTTGGGCCTTCCTCCAGGCACTaGCAGGGCCAACCGGAGATT +
Preference number: 3 (lower is better)
Translates to: VQSPCVCRCCLSGLGRVGPSSRH*QGQPEI
Trigger: AATCTCCGGTTGGCCCTGCAAGTGCCTGGAGGAAGG...CCCAACCCTGCCCAAGCCAGACAGACAGCACCTGCAGACGCAGGGGGACTGCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
3UTR-3UTR CAA 90 bp CCCTGGCCACCATGCGAGGGCAGGCTCCCTCATCCCTCCTTCAAACGTGGTCTGCCTGGGCAGGTGGAATaGTGCAGTCCCCCTGCGTCT +
Preference number: 3 (lower is better)
Translates to: PWPPCEGRLPHPSFKRGLPGQVE*CSPPAS
Trigger: AGACGCAGGGGGACTGCACAATTCCACCTGCCCAGG...CAGACCACGTTTGAAGGAGGGATGAGGGAGCCTGCCCTCGCATGGTGGCCAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567525.5
3UTR-3UTR CAA 90 bp GCTGAGCGACACCGACGGCCCAAAACTGTCTGGTACTCGGTGTCGTCCCAGTCCCCCCTGACCCCGCACTaGCCCACCAGGAGACATTCC +
Preference number: 3 (lower is better)
Translates to: AERHRRPKTVWYSVSSQSPLTPH*PTRRHS
Trigger: GGAATGTCTCCTGGTGGGCAAGTGCGGGGTCAGGGG...GGACTGGGACGACACCGAGTACCAGACAGTTTTGGGCCGTCGGTGTCGCTCAGC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000569433.1
3UTR TCA 72 bp CAGGGTCTCTGCTGGTCGGAGCCAGCACACAGGGGCTaGGCGACACCGACGGCCCAAAACTGTCTGGTACTC +
Preference number: 3 (lower is better)
Translates to: QGLCWSEPAHRG*ATPTAQNCLVL
Trigger: GAGTACCAGACAGTTTTGGGCCGTCGGTGTCGCTCAGCCCCTGTGTGCTGGCTCCGACCAGCAGAGACCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569433.1
3UTR GCA 72 bp TCCTGGGCAGGTGGAATTGTGCAGTCCCCCTGCGTCTaGAGGTGCTGTCTGTCTGGCTTGGGCAGGGTTGGG +
Preference number: 3 (lower is better)
Translates to: SWAGGIVQSPCV*RCCLSGLGRVG
Trigger: CCCAACCCTGCCCAAGCCAGACAGACAGCACCTGCAGACGCAGGGGGACTGCACAATTCCACCTGCCCAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
3UTR GCA 72 bp GTCAGGTCCTGGGCAGGTGGAATTGTGCAGTCCCCCTaGGTCTGCAGGTGCTGTCTGTCTGGCTTGGGCAGG +
Preference number: 3 (lower is better)
Translates to: VRSWAGGIVQSP*VCRCCLSGLGR
Trigger: CCTGCCCAAGCCAGACAGACAGCACCTGCAGACGCAGGGGGACTGCACAATTCCACCTGCCCAGGACCTGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
3UTR CCA 72 bp CATACCGCCCTCGCTGACTGGTGCCCAAGAAGGGTTTaGAGGCATAGACGGGTGCGTGCGTGGCGTCGACAG +
Preference number: 3 (lower is better)
Translates to: HTALADWCPRRV*RHRRVRAWRRQ
Trigger: CTGTCGACGCCACGCACGCACCCGTCTATGCCTCCAAACCCTTCTTGGGCACCAGTCAGCGAGGGCGGTATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
3UTR CCA 72 bp TCTCCCGGACGGCGTCTCCATACCGCCCTCGCTGACTaGTGCCCAAGAAGGGTTTGGAGGCATAGACGGGTG +
Preference number: 3 (lower is better)
Translates to: SPGRRLHTALAD*CPRRVWRHRRV
Trigger: CACCCGTCTATGCCTCCAAACCCTTCTTGGGCACCAGTCAGCGAGGGCGGTATGGAGACGCCGTCCGGGAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
3UTR-3UTR CAA 90 bp CTGGGCAGGTGGAATTGTGCAGTCCCCCTGCGTCTGCAGGTGCTGTCTGTCTGGCCTTCCTCCAGGCACTaGCAGGGCCAACCGGAGATT +
Preference number: 3 (lower is better)
Translates to: LGRWNCAVPLRLQVLSVWPSSRH*QGQPEI
Trigger: AATCTCCGGTTGGCCCTGCAAGTGCCTGGAGGAAGG...CCAGACAGACAGCACCTGCAGACGCAGGGGGACTGCACAATTCCACCTGCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
3UTR TCA 72 bp TGGTGTAGAAGCCATTGCGGATGGGTAGCCGTCCTGTaGGCAGTGCCGCCCTCGATGGCGAGCACAGAGGGT +
Preference number: 3 (lower is better)
Translates to: WCRSHCGWVAVL*AVPPSMASTEG
Trigger: ACCCTCTGTGCTCGCCATCGAGGGCGGCACTGCTCACAGGACGGCTACCCATCCGCAATGGCTTCTACACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568613.5
3UTR GCA 72 bp TCAGAAGCTCCGGCAGGAGCTGCTCCGAGTCTGGGATaGCGCCCACAATCTCCTGCGGTGTGTAGGCGTTTC +
Preference number: 3 (lower is better)
Translates to: SEAPAGAAPSLG*RPQSPAVCRRF
Trigger: GAAACGCCTACACACCGCAGGAGATTGTGGGCGGCATCCCAGACTCGGAGCAGCTCCTGCCGGAGCTTCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568613.5
3UTR CCA 72 bp CTTCTTCAGAAGCTCCGGCAGGAGCTGCTCCGAGTCTaGGATGCCGCCCACAATCTCCTGCGGTGTGTAGGC +
Preference number: 3 (lower is better)
Translates to: LLQKLRQELLRV*DAAHNLLRCVG
Trigger: GCCTACACACCGCAGGAGATTGTGGGCGGCATCCCAGACTCGGAGCAGCTCCTGCCGGAGCTTCTGAAGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568613.5
3UTR TCA 72 bp CTGCACGGTGACCCATGCCCCAGGCAGGCTCATTCCTaGGTCTCCAGGTGGCTCCCACAAGGAGTTAGGGAA +
Preference number: 3 (lower is better)
Translates to: LHGDPCPRQAHS*VSRWLPQGVRE
Trigger: TTCCCTAACTCCTTGTGGGAGCCACCTGGAGACTCAGGAATGAGCCTGCCTGGGGCATGGGTCACCGTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569433.1
3UTR GCA 72 bp GACAGTAGGGTTTCAACCCAGGTGTGTCTGGGGTCCTaGACGGTGACCCATGCCCCAGGCAGGCTCATTCCT +
Preference number: 3 (lower is better)
Translates to: DSRVSTQVCLGS*TVTHAPGRLIP
Trigger: AGGAATGAGCCTGCCTGGGGCATGGGTCACCGTGCAGGACCCCAGACACACCTGGGTTGAAACCCTACTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569433.1
3UTR CCA 72 bp CCTGCGGTGTGTAGGCGTTTCTGGCATGGGCGTTGGTaGTGTAGAAGCCATTGCGGATGGGTAGCCGTCCTG +
Preference number: 3 (lower is better)
Translates to: PAVCRRFWHGRW*CRSHCGWVAVL
Trigger: CAGGACGGCTACCCATCCGCAATGGCTTCTACACCACCAACGCCCATGCCAGAAACGCCTACACACCGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568613.5
3UTR CCA 72 bp ATGCGAGGGCAGGCTCCCTCATCCCTCCTTCAAACGTaGTCTGCTTCCCACACAGAAAGGGGCCGTTGCTGC +
Preference number: 3 (lower is better)
Translates to: MRGQAPSSLLQT*SASHTERGRCC
Trigger: GCAGCAACGGCCCCTTTCTGTGTGGGAAGCAGACCACGTTTGAAGGAGGGATGAGGGAGCCTGCCCTCGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
3UTR CCA 72 bp TCCAGGTCCAGAAGTGAGCCTTGTGCTGCCCGAGGGTaGCCGCCATCAGCGTGTCGCCACGGTAATAGAAGA +
Preference number: 3 (lower is better)
Translates to: SRSRSEPCAARG*PPSACRHGNRR
Trigger: TCTTCTATTACCGTGGCGACACGCTGATGGCGGCCACCCTCGGGCAGCACAAGGCTCACTTCTGGACCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
3UTR TCA 72 bp GCCTGTGACCCAGATGCCACTTGCCGACAATCTTGCTaGCGTAGCCGGCCTTCTTCAGAAGCTCCGGCAGGA +
Preference number: 3 (lower is better)
Translates to: ACDPDATCRQSC*RSRPSSEAPAG
Trigger: TCCTGCCGGAGCTTCTGAAGAAGGCCGGCTACGTCAGCAAGATTGTCGGCAAGTGGCATCTGGGTCACAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568613.5
3UTR CCA 72 bp TCTCCTGCGGTGTGTAGGCGTTTCTGGCATGGGCGTTaGTGGTGTAGAAGCCATTGCGGATGGGTAGCCGTC +
Preference number: 3 (lower is better)
Translates to: SPAVCRRFWHGR*WCRSHCGWVAV
Trigger: GACGGCTACCCATCCGCAATGGCTTCTACACCACCAACGCCCATGCCAGAAACGCCTACACACCGCAGGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568613.5
3UTR CCA 72 bp CCAAGAAGGGTTTGGAGGCATAGACGGGTGCGTGCGTaGCGTCGACAGCCCAGTAGAGGAAAAAGGGGTGGT +
Preference number: 3 (lower is better)
Translates to: PRRVWRHRRVRA*RRQPSRGKRGG
Trigger: ACCACCCCTTTTTCCTCTACTGGGCTGTCGACGCCACGCACGCACCCGTCTATGCCTCCAAACCCTTCTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
3UTR-3UTR CAA 90 bp TGGCCTGAGTCTGCGCAGGTGCTAGTGGGACCAGAGGCACTTCTTGGGAATGGAAAGAAGACGAAGGTGTaGTCCGCGACGTGCAGGTCT +
Preference number: 3 (lower is better)
Translates to: WPESAQVLVGPEALLGNGKKTKV*SATCRS
Trigger: AGACCTGCACGTCGCGGACAACACCTTCGTCTTCTT...TCCATTCCCAAGAAGTGCCTCTGGTCCCACTAGCACCTGCGCAGACTCAGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
3UTR-3UTR CAA 90 bp TTCTTGGGAATGGATTCTGGAGGTGTCAGACACTTCCCTAACTTTTCACAGCCCGCCCAGTTGCACACGTaGAGCTGGGGCTGCGCGGGG +
Preference number: 3 (lower is better)
Translates to: FLGMDSGGVRHFPNFSQPAQLHT*SWGCAG
Trigger: CCCCGCGCAGCCCCAGCTCAACGTGTGCAACTGGGC...GGGCTGTGAAAAGTTAGGGAAGTGTCTGACACCTCCAGAATCCATTCCCAAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
3UTR GCA 72 bp ACTGGTGCCCAAGAAGGGTTTGGAGGCATAGACGGGTaGGTGCGTGGCGTCGACAGCCCAGTAGAGGAAAAA +
Preference number: 3 (lower is better)
Translates to: TGAQEGFGGIDG*VRGVDSPVEEK
Trigger: TTTTTCCTCTACTGGGCTGTCGACGCCACGCACGCACCCGTCTATGCCTCCAAACCCTTCTTGGGCACCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
3UTR TCA 72 bp CCCCCAGGTGTGGCAGCTGAGGTTCAAGAATGGAAGTaGCCCCCAAGCTTGGAGACAGTAGGGTTTCAACCC +
Preference number: 3 (lower is better)
Translates to: PPGVAAEVQEWK*PPSLETVGFQP
Trigger: GGGTTGAAACCCTACTGTCTCCAAGCTTGGGGGTCACTTCCATTCTTGAACCTCAGCTGCCACACCTGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000569433.1
3UTR GCA 72 bp GTCGACAGCCCAGTAGAGGAAAAAGGGGTGGTGCCGTaGCTGTCTCTTAATGAAGTCCAGGGCTTCCTGCAG +
Preference number: 3 (lower is better)
Translates to: VDSPVEEKGVVP*LSLNEVQGFLQ
Trigger: CTGCAGGAAGCCCTGGACTTCATTAAGAGACAGGCACGGCACCACCCCTTTTTCCTCTACTGGGCTGTCGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
3UTR-3UTR CAA 90 bp GGTGCTAGTGGGACCAGAGGCACTTCTTGGGAATGGATTCTGGAGGTGTCAGACAAGAAGACGAAGGTGTaGTCCGCGACGTGCAGGTCT +
Preference number: 3 (lower is better)
Translates to: GASGTRGTSWEWILEVSDKKTKV*SATCRS
Trigger: AGACCTGCACGTCGCGGACAACACCTTCGTCTTCTT...GTCTGACACCTCCAGAATCCATTCCCAAGAAGTGCCTCTGGTCCCACTAGCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
3UTR TCA 72 bp AAGATCAGGGGCAGCTTCGTGTGGTCTTCCAGATTGTaGGTTGTGACCCCTGAAACGTTCTGCCCAGGGCAG +
Preference number: 3 (lower is better)
Translates to: KIRGSFVWSSRL*VVTPETFCPGQ
Trigger: CTGCCCTGGGCAGAACGTTTCAGGGGTCACAACTCACAATCTGGAAGACCACACGAAGCTGCCCCTGATCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
3UTR GCA 72 bp TCCGACGTGAAGAAGACGAAGGTGTTGTCCGCGACGTaGAGGTCTTGGAGGAGCTCCAGTATCTTCCCAATG +
Preference number: 3 (lower is better)
Translates to: SDVKKTKVLSAT*RSWRSSSIFPM
Trigger: CATTGGGAAGATACTGGAGCTCCTCCAAGACCTGCACGTCGCGGACAACACCTTCGTCTTCTTCACGTCGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
3UTR CCA 72 bp CGATGGCGAGCACAGAGGGTTGGCAGAATAGAAGTTTaGGAAAAGCAGCCCTTCTGCAGCCATCCGGTCCAA +
Preference number: 3 (lower is better)
Translates to: RWRAQRVGRIEV*EKQPFCSHPVQ
Trigger: TTGGACCGGATGGCTGCAGAAGGGCTGCTTTTCCCAAACTTCTATTCTGCCAACCCTCTGTGCTCGCCATCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568613.5
3UTR CCA 72 bp CCATCTCCCAGTCCCTGTACACAGGGATGTTGGGCCTaGCCTTGTTGTCATAAGGTCCAAAGTGGCAGTTGG +
Preference number: 3 (lower is better)
Translates to: PSPSPCTQGCWA*PCCHKVQSGSW
Trigger: CCAACTGCCACTTTGGACCTTATGACAACAAGGCCAGGCCCAACATCCCTGTGTACAGGGACTGGGAGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568613.5
3UTR CCA 72 bp TGCCAACCATCTCCCAGTCCCTGTACACAGGGATGTTaGGCCTGGCCTTGTTGTCATAAGGTCCAAAGTGGC +
Preference number: 3 (lower is better)
Translates to: CQPSPSPCTQGC*AWPCCHKVQSG
Trigger: GCCACTTTGGACCTTATGACAACAAGGCCAGGCCCAACATCCCTGTGTACAGGGACTGGGAGATGGTTGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568613.5
3UTR TCA 72 bp GGGGCAGCTTCGTGTGGTCTTCCAGATTGTGAGTTGTaGCCCCTGAAACGTTCTGCCCAGGGCAGAAATCAA +
Preference number: 3 (lower is better)
Translates to: GAASCGLPDCEL*PLKRSAQGRNQ
Trigger: TTGATTTCTGCCCTGGGCAGAACGTTTCAGGGGTCACAACTCACAATCTGGAAGACCACACGAAGCTGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
3UTR CCA 72 bp CAGGGAAATTCCTTGTGGACAAAGGACAGACGGAACTaGAAGTCATCCCTCTGGGGCTCCCCTGAGACAAAC +
Preference number: 3 (lower is better)
Translates to: QGNSLWTKDRRN*KSSLWGSPETN
Trigger: GTTTGTCTCAGGGGAGCCCCAGAGGGATGACTTCCAGTTCCGTCTGTCCTTTGTCCACAAGGAATTTCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
3UTR TCA 72 bp CTTCGTGTGGTCTTCCAGATTGTGAGTTGTGACCCCTaGAACGTTCTGCCCAGGGCAGAAATCAATGCCCTG +
Preference number: 3 (lower is better)
Translates to: LRVVFQIVSCDP*NVLPRAEINAL
Trigger: CAGGGCATTGATTTCTGCCCTGGGCAGAACGTTTCAGGGGTCACAACTCACAATCTGGAAGACCACACGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
3UTR GCA 72 bp GTTGGCAGAATAGAAGTTTGGGAAAAGCAGCCCTTCTaGAGCCATCCGGTCCAAATTCGGGGTCTCTCTGGA +
Preference number: 3 (lower is better)
Translates to: VGRIEVWEKQPF*SHPVQIRGLSG
Trigger: TCCAGAGAGACCCCGAATTTGGACCGGATGGCTGCAGAAGGGCTGCTTTTCCCAAACTTCTATTCTGCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568613.5
3UTR CCA 72 bp GCCTCCCTCATAATTAGCGTCCAGGGAAATTCCTTGTaGACAAAGGACAGACGGAACTGGAAGTCATCCCTC +
Preference number: 3 (lower is better)
Translates to: ASLIISVQGNSL*TKDRRNWKSSL
Trigger: GAGGGATGACTTCCAGTTCCGTCTGTCCTTTGTCCACAAGGAATTTCCCTGGACGCTAATTATGAGGGAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
3UTR CCA 72 bp GCCTGGCCTTGTTGTCATAAGGTCCAAAGTGGCAGTTaGGGGATCCAAACCACTCATCAAATCCGTGCTTCA +
Preference number: 3 (lower is better)
Translates to: AWPCCHKVQSGS*GIQTTHQIRAS
Trigger: TGAAGCACGGATTTGATGAGTGGTTTGGATCCCCCAACTGCCACTTTGGACCTTATGACAACAAGGCCAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568613.5
3UTR CCA 72 bp GCAGGTGCTAGTGGGACCAGAGGCACTTCTTGGGAATaGATTCTGGAGGTGTCAGACACTTCCCTAACTTTT +
Preference number: 3 (lower is better)
Translates to: AGASGTRGTSWE*ILEVSDTSLTF
Trigger: AAAAGTTAGGGAAGTGTCTGACACCTCCAGAATCCATTCCCAAGAAGTGCCTCTGGTCCCACTAGCACCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
3UTR-3UTR CAA 90 bp CCGTTCCCTTACTGTTTACATAAAAATGCGGATTCACTGGGCCAGACTCAATCGGTCCAGGGAAATTCCTaGTGGACAAAGGACAGACGG +
Preference number: 3 (lower is better)
Translates to: PFPYCLHKNADSLGQTQSVQGNS*WTKDRR
Trigger: CCGTCTGTCCTTTGTCCACAAGGAATTTCCCTGGAC...CGATTGAGTCTGGCCCAGTGAATCCGCATTTTTATGTAAACAGTAAGGGAACGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
3UTR CCA 72 bp CGTTCCCTTACTGTTTACATAAAAATGCGGATTCACTaGGCCAGACTCAATCGTGTATTCAGTGGAAGGCTG +
Preference number: 3 (lower is better)
Translates to: RSLTVYIKMRIH*ARLNRVFSGRL
Trigger: CAGCCTTCCACTGAATACACGATTGAGTCTGGCCCAGTGAATCCGCATTTTTATGTAAACAGTAAGGGAACG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
3UTR TCA 72 bp TGTCACAGGTGCATCCTTAACCTTGGCAAAATAAACTaGGACTGGTCTCAGATATTTGGGGTTCACAAAGGC +
Preference number: 3 (lower is better)
Translates to: CHRCILNLGKIN*DWSQIFGVHKG
Trigger: GCCTTTGTGAACCCCAAATATCTGAGACCAGTCTCAGTTTATTTTGCCAAGGTTAAGGATGCACCTGTGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
CDS-3UTR TCA 90 bp GACTGCCCAGCCCTTGGGTGTGGCCCGTGGCCCCCACTGGTCAGCACAGGTGGGTGGGGTCCTGCACGGTaGCCCATGCCCCAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: DCPALGCGPWPPLVSTGGWGPAR*PMPQAG
Trigger: GCCTGCCTGGGGCATGGGTCACCGTGCAGGACCCCA...CCCACCTGTGCTGACCAGTGGGGGCCACGGGCCACACCCAAGGGCTGGGCAGTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000569433.1
CDS-3UTR TCA 90 bp GGGGAGGACCGAGGCCAGAGCCATCCTTCCTCCAGGCACTTGCAGGGCCAACCGGAGACGGCAGGGTCCTaGGGTCTGAGGCGCCGTGGG +
Preference number: 4 (lower is better)
Translates to: GEDRGQSHPSSRHLQGQPETAGS*GLRRRG
Trigger: CCCACGGCGCCTCAGACCTCAGGACCCTGCCGTCTC...CGGTTGGCCCTGCAAGTGCCTGGAGGAAGGATGGCTCTGGCCTCGGTCCTCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
CDS-3UTR GCA 90 bp GTGGGGAGGAGGTTGAGGCCATCAATGGCCCTGTCGCTGGGCGGCGTCAGGCCCGTGGCTCACCTGGCCTaGAGTGACGTGCCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: VGRRLRPSMALSLGGVRPVAHLA*SDVPWP
Trigger: TGGCCAGGGCACGTCACTGCAGGCCAGGTGAGCCAC...GGGCCTGACGCCGCCCAGCGACAGGGCCATTGATGGCCTCAACCTCCTCCCCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
CDS-3UTR CCA 90 bp GGGTTGGGGGAGGACCGAGGCCAGAGCCATCCTTCCTCCAGGCACTTGCAGGGCCAATGGCCCTGTCGCTaGGCGGCGTCAGGCCCGCAA +
Preference number: 4 (lower is better)
Translates to: GLGEDRGQSHPSSRHLQGQWPCR*AASGPQ
Trigger: TTGCGGGCCTGACGCCGCCCAGCGACAGGGCCATTG...GCCCTGCAAGTGCCTGGAGGAAGGATGGCTCTGGCCTCGGTCCTCCCCCAACCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268695.10
ENST00000567525.5
ENST00000568613.5
CDS-3UTR GCA 90 bp ATGACCGCCCAGTTGCACACGTTGAGCTGGGGCTGCGCGGGGACCAAGGCCTCCTGGCCTGCAGTGACGTaGCCTGGCCACCATGCGAGG +
Preference number: 4 (lower is better)
Translates to: MTAQLHTLSWGCAGTKASWPAVT*PGHHAR
Trigger: CCTCGCATGGTGGCCAGGGCACGTCACTGCAGGCCA...GGAGGCCTTGGTCCCCGCGCAGCCCCAGCTCAACGTGTGCAACTGGGCGGTCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
CDS-3UTR GCA 90 bp TGGGGCTGCGCGGGGACCAAGGCCTCCTGGTGCTGCTGGACGACCGAGGTGATCACCAAGGCCTCCTGGTaGTGCTGGACGACCGAGGTG +
Preference number: 4 (lower is better)
Translates to: WGCAGTKASWCCWTTEVITKASW*CWTTEV
Trigger: CACCTCGGTCGTCCAGCAGCACCAGGAGGCCTTGGT...GATCACCTCGGTCGTCCAGCAGCACCAGGAGGCCTTGGTCCCCGCGCAGCCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
CDS-3UTR CCA 90 bp TGCTGTCATCAATCTCCCGGACGGCGTCTCCATACCGCCCTCGCTGACTGGTGCGCAGGAGCAGGATGTTaGGGGGCTGCGGGGCGCCCG +
Preference number: 4 (lower is better)
Translates to: CCHQSPGRRLHTALADWCAGAGC*GAAGRP
Trigger: CGGGCGCCCCGCAGCCCCCCAACATCCTGCTCCTGC...GCACCAGTCAGCGAGGGCGGTATGGAGACGCCGTCCGGGAGATTGATGACAGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
CDS-3UTR CCA 90 bp TGGGGCTGCGCGGGGACCAAGGCCTCCTGGTGCTGCTGGACGACCGAGGTGATCGGGTCCCGTCCCAGGTaGAAGATCAGGGGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: WGCAGTKASWCCWTTEVIGSRPR*KIRGSF
Trigger: GAAGCTGCCCCTGATCTTCCACCTGGGACGGGACCC...GATCACCTCGGTCGTCCAGCAGCACCAGGAGGCCTTGGTCCCCGCGCAGCCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
CDS-3UTR CCA 90 bp TGGGGCTGCGCGGGGACCAAGGCCTCCTGGTGCTGCTGGACGACCGAGGTGATCGCCTCCTGGTGCTGCTaGACGACCGAGGTGATCCTG +
Preference number: 4 (lower is better)
Translates to: WGCAGTKASWCCWTTEVIASWCC*TTEVIL
Trigger: CAGGATCACCTCGGTCGTCCAGCAGCACCAGGAGGC...GATCACCTCGGTCGTCCAGCAGCACCAGGAGGCCTTGGTCCCCGCGCAGCCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
CDS-3UTR TCA 90 bp GAATTGTGCAGTCCCCCTGCGTCTGCAGGTGCTGTCTGTCTGGCTTGGGCAGGGCCATCCCCGCGGCGCTaGGCACCAGCAACAGCTGCC +
Preference number: 4 (lower is better)
Translates to: ELCSPPASAGAVCLAWAGPSPRR*APATAA
Trigger: GGCAGCTGTTGCTGGTGCTCAGCGCCGCGGGGATGG...CCCTGCCCAAGCCAGACAGACAGCACCTGCAGACGCAGGGGGACTGCACAATTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268695.10
CDS-3UTR TCA 90 bp GGGGAGGACCGAGGCCAGAGCCATCCTTCCTCCAGGCACTTGCAGGGCCAACCGTGGAACTGGGGCCTGTaGCCCAGATGCCACTTGCCG +
Preference number: 4 (lower is better)
Translates to: GEDRGQSHPSSRHLQGQPWNWGL*PRCHLP
Trigger: CGGCAAGTGGCATCTGGGTCACAGGCCCCAGTTCCA...CGGTTGGCCCTGCAAGTGCCTGGAGGAAGGATGGCTCTGGCCTCGGTCCTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000568613.5
CDS-3UTR TCA 90 bp GGTGCCCAAGAAGGGTTTGGAGGCATAGACGGGTGCGTGCGTGGCGTCGACAGCGTTCGGGGGCGGAAATaGGGGCAGCGCCGTTGTCCG +
Preference number: 4 (lower is better)
Translates to: GAQEGFGGIDGCVRGVDSVRGRK*GQRRCP
Trigger: CGGACAACGGCGCTGCCCTCATTTCCGCCCCCGAAC...GCTGTCGACGCCACGCACGCACCCGTCTATGCCTCCAAACCCTTCTTGGGCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
CDS-3UTR TCA 90 bp CCATCCTTCCTCCAGGCACTTGCAGGGCCAACCGGAGATTCTAGGCCTGGCCTGGAGACGGCAGGGTCCTaGGGTCTGAGGCGCCGTGGG +
Preference number: 4 (lower is better)
Translates to: PSFLQALAGPTGDSRPGLETAGS*GLRRRG
Trigger: CCCACGGCGCCTCAGACCTCAGGACCCTGCCGTCTC...CAGGCCAGGCCTAGAATCTCCGGTTGGCCCTGCAAGTGCCTGGAGGAAGGATGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
CDS-3UTR TCA 90 bp CAGGGTCAGGTCCTGGGCAGGTGGAATTGTGCAGTCCCCCTGCGTCTGCAGGTGTGGGTAGCCGTCCTGTaGGCAGTGCCGCCCTCGGTC +
Preference number: 4 (lower is better)
Translates to: QGQVLGRWNCAVPLRLQVWVAVL*AVPPSV
Trigger: GACCGAGGGCGGCACTGCTCACAGGACGGCTACCCA...CACCTGCAGACGCAGGGGGACTGCACAATTCCACCTGCCCAGGACCTGACCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567525.5
CDS-3UTR GCA 90 bp GGGAACCTCTCCCCTGGGTCCCGTCCCAGGTGGAAGATCAGGGGCAGCTTCGTGCCGTCCTGTGAGCAGTaGCGCCCTCGATGGCGAGCA +
Preference number: 4 (lower is better)
Translates to: GNLSPGSRPRWKIRGSFVPSCEQ*RPRWRA
Trigger: TGCTCGCCATCGAGGGCGGCACTGCTCACAGGACGG...CACGAAGCTGCCCCTGATCTTCCACCTGGGACGGGACCCAGGGGAGAGGTTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568613.5
CDS-3UTR GCA 90 bp ATGACCGCCCAGTTGCACACGTTGAGCTGGGGCTGCGCGGGGACCAAGGCCTCCGCTCCGAGTCTGGGATaGCGCCCACAATCTCCTGCG +
Preference number: 4 (lower is better)
Translates to: MTAQLHTLSWGCAGTKASAPSLG*RPQSPA
Trigger: CGCAGGAGATTGTGGGCGGCATCCCAGACTCGGAGC...GGAGGCCTTGGTCCCCGCGCAGCCCCAGCTCAACGTGTGCAACTGGGCGGTCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
CDS-3UTR GCA 90 bp CAGCCCGGAGGTGCCCAGTTCATGACCGCCCAGTTGCACACGTTGAGCTGGGGCAGCTCCGGCAGGAGCTaGTCCGAGTCTGGGATGCCG +
Preference number: 4 (lower is better)
Translates to: QPGGAQFMTAQLHTLSWGSSGRS*SESGMP
Trigger: CGGCATCCCAGACTCGGAGCAGCTCCTGCCGGAGCT...GCCCCAGCTCAACGTGTGCAACTGGGCGGTCATGAACTGGGCACCTCCGGGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
CDS-3UTR CCA 90 bp GCTGAGCGACACCGACGGCCCAAAACTGTCTGGTACTCGGTGTCGTCCCAGTCCCGACAACCGCCGCCATaGCAACCACGGGAGCCGCGG +
Preference number: 4 (lower is better)
Translates to: AERHRRPKTVWYSVSSQSRQPPP*QPREPR
Trigger: CCGCGGCTCCCGTGGTTGCCATGGCGGCGGTTGTCG...GGACTGGGACGACACCGAGTACCAGACAGTTTTGGGCCGTCGGTGTCGCTCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569433.1
CDS-3UTR CCA 90 bp TGGGGCTGCGCGGGGACCAAGGCCTCCTGGTGCTGCTGGACGACCGAGGTGATCATGATGCTGCCCAGCTaGTGGCTCACCTGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: WGCAGTKASWCCWTTEVIMMLPS*WLTWPA
Trigger: TGCAGGCCAGGTGAGCCACCAGCTGGGCAGCATCAT...GATCACCTCGGTCGTCCAGCAGCACCAGGAGGCCTTGGTCCCCGCGCAGCCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
CDS-3UTR CCA 90 bp GTGCAGTCCCCCTGCGTCTGCAGGTGCTGTCTGTCTGGCTTGGGCAGGGTTGGGGGGACCAAGGCCTCCTaGTGCTGCTGGACGACCGAG +
Preference number: 4 (lower is better)
Translates to: VQSPCVCRCCLSGLGRVGGTKAS*CCWTTE
Trigger: CTCGGTCGTCCAGCAGCACCAGGAGGCCTTGGTCCC...CCCAACCCTGCCCAAGCCAGACAGACAGCACCTGCAGACGCAGGGGGACTGCAC
67% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
CDS-3UTR CCA 90 bp GAGGAGGTTGAGGCCATCAATGGCCCTGTCGCTGGGCGGCGTCAGGCCCGCAAGGCTGTCTGTCTGGCTTaGGCAGGGTTGGGGGAGGAC +
Preference number: 4 (lower is better)
Translates to: EEVEAINGPVAGRRQARKAVCLA*AGLGED
Trigger: GTCCTCCCCCAACCCTGCCCAAGCCAGACAGACAGC...CTTGCGGGCCTGACGCCGCCCAGCGACAGGGCCATTGATGGCCTCAACCTCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
3UTR CAA 72 bp TCACAGCCCGGAGGTGCCCAGTTCATGACCGCCCAGTaGCACACGTTGAGCTGGGGCTGCGCGGGGACCAAG +
Preference number: 4 (lower is better)
Translates to: SQPGGAQFMTAQ*HTLSWGCAGTK
Trigger: CTTGGTCCCCGCGCAGCCCCAGCTCAACGTGTGCAACTGGGCGGTCATGAACTGGGCACCTCCGGGCTGTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
CDS-3UTR TCA 90 bp CTGGGCAGGTGGAATTGTGCAGTCCCCCTGCGTCTGCAGGTGCTGTCTGTCTGGCCCAGTTGCACACGTTaGGCTGGGGCTGCGCGGGGA +
Preference number: 4 (lower is better)
Translates to: LGRWNCAVPLRLQVLSVWPSCTR*AGAARG
Trigger: TCCCCGCGCAGCCCCAGCTCAACGTGTGCAACTGGG...CCAGACAGACAGCACCTGCAGACGCAGGGGGACTGCACAATTCCACCTGCCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
CDS-3UTR TCA 90 bp CCGGACGGCGTCTCCATACCGCCCTCGCTGACTGGTGCCCAAGAAGGGTTTGGACGAGGAGGAGGGTCCTaGAATCTGAGGCGCCGTGGG +
Preference number: 4 (lower is better)
Translates to: PDGVSIPPSLTGAQEGFGRGGGS*NLRRRG
Trigger: CCCACGGCGCCTCAGATTTCAGGACCCTCCTCCTCG...TCCAAACCCTTCTTGGGCACCAGTCAGCGAGGGCGGTATGGAGACGCCGTCCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567525.5
CDS-3UTR TCA 90 bp GTGGGGAGGAGGTTGAGGCCATCAATGGCCCTGTCGCTGGGCGGCGTCAGGCCCGTTGTCAGGACCTCCTaGGGCTGTCACAGGTGCATC +
Preference number: 4 (lower is better)
Translates to: VGRRLRPSMALSLGGVRPVVRTS*GCHRCI
Trigger: GATGCACCTGTGACAGCCTCAGGAGGTCCTGACAAC...GGGCCTGACGCCGCCCAGCGACAGGGCCATTGATGGCCTCAACCTCCTCCCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567525.5
CDS-3UTR TCA 90 bp TGTCTGGGGTCCTGCACGGTGACCCATGCCCCAGGCAGGCTCATTCCTGAGTCTCCAGCACACAGGGGCTaGGCGACACCGACGGCCCAA +
Preference number: 4 (lower is better)
Translates to: CLGSCTVTHAPGRLIPESPAHRG*ATPTAQ
Trigger: TTGGGCCGTCGGTGTCGCTCAGCCCCTGTGTGCTGG...AGACTCAGGAATGAGCCTGCCTGGGGCATGGGTCACCGTGCAGGACCCCAGACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000569433.1
CDS-3UTR GCA 90 bp GTGCAGTCCCCCTGCGTCTGCAGGTGCTGTCTGTCTGGCTTGGGCAGGGTTGGGGCTCCGAGTCTGGGATaGCGCCCACAATCTCCTGCG +
Preference number: 4 (lower is better)
Translates to: VQSPCVCRCCLSGLGRVGAPSLG*RPQSPA
Trigger: CGCAGGAGATTGTGGGCGGCATCCCAGACTCGGAGC...CCCAACCCTGCCCAAGCCAGACAGACAGCACCTGCAGACGCAGGGGGACTGCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
CDS-3UTR GCA 90 bp GTTGGTCCAGGTCCAGAAGTGAGCCTTGTGCTGCCCGAGGGTGGCCGCCATCAGGGAGGCATAGACGGGTaGGTGCGTGGCGTCGACAGC +
Preference number: 4 (lower is better)
Translates to: VGPGPEVSLVLPEGGRHQGGIDG*VRGVDS
Trigger: GCTGTCGACGCCACGCACGCACCCGTCTATGCCTCC...CTGATGGCGGCCACCCTCGGGCAGCACAAGGCTCACTTCTGGACCTGGACCAAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
CDS-3UTR GCA 90 bp GGTGCCCAAGAAGGGTTTGGAGGCATAGACGGGTGCGTGCGTGGCGTCGACAGCGGAGGCATAGACGGGTaGGTGCGTGGCGTCGACAGC +
Preference number: 4 (lower is better)
Translates to: GAQEGFGGIDGCVRGVDSGGIDG*VRGVDS
Trigger: GCTGTCGACGCCACGCACGCACCCGTCTATGCCTCC...GCTGTCGACGCCACGCACGCACCCGTCTATGCCTCCAAACCCTTCTTGGGCACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
CDS-3UTR GCA 90 bp TGTGCAGTCCCCCTGCGTCTGCAGGTGCTGTCTGTCTGGCTTGGGCAGGGTTGGTGGCCTGCAGTGACGTaGCCTGGCCACCATGCGAGG +
Preference number: 4 (lower is better)
Translates to: CAVPLRLQVLSVWLGQGWWPAVT*PGHHAR
Trigger: CCTCGCATGGTGGCCAGGGCACGTCACTGCAGGCCA...CCAACCCTGCCCAAGCCAGACAGACAGCACCTGCAGACGCAGGGGGACTGCACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
CDS-3UTR GCA 90 bp GCCCGTGGCCCCCACTGGTCAGCACAGGTGGGTCTGAAGGCACCTGTCAGGGTCACCTGTCAGGGTCTCTaGTGGTCGGAGCCAGCACAC +
Preference number: 4 (lower is better)
Translates to: ARGPHWSAQVGLKAPVRVTCQGL*WSEPAH
Trigger: GTGTGCTGGCTCCGACCAGCAGAGACCCTGACAGGT...GACCCTGACAGGTGCCTTCAGACCCACCTGTGCTGACCAGTGGGGGCCACGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569433.1
CDS-3UTR CCA 90 bp GCAAACTGTATCCCCAGCCACCTCAGGCACCTGTTGTCAGGACCTCCTGAGGCTGCAGGAGCAGGATGTTaGGGGGCTGCGGGGCGCCCG +
Preference number: 4 (lower is better)
Translates to: ANCIPSHLRHLLSGPPEAAGAGC*GAAGRP
Trigger: CGGGCGCCCCGCAGCCCCCCAACATCCTGCTCCTGC...AGCCTCAGGAGGTCCTGACAACAGGTGCCTGAGGTGGCTGGGGATACAGTTTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
CDS-3UTR CCA 90 bp CCCTGGCCACCATGCGAGGGCAGGCTCCCTCATCCCTCCTTCAAACGTGGTCTGCAGTGCCGCCCTCGATaGCGAGCACAGAGGGTTGGC +
Preference number: 4 (lower is better)
Translates to: PWPPCEGRLPHPSFKRGLQCRPR*RAQRVG
Trigger: GCCAACCCTCTGTGCTCGCCATCGAGGGCGGCACTG...CAGACCACGTTTGAAGGAGGGATGAGGGAGCCTGCCCTCGCATGGTGGCCAGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568613.5
CDS-3UTR CCA 90 bp GAGGGTGGGGAGGAGGTTGAGGCCATCAATGGCCCTGTCGCTGGGCGGCGTCAGGAGCTGCTCCGAGTCTaGGATGCCGCCCACAATCTC +
Preference number: 4 (lower is better)
Translates to: EGGEEVEAINGPVAGRRQELLRV*DAAHNL
Trigger: GAGATTGTGGGCGGCATCCCAGACTCGGAGCAGCTC...CTGACGCCGCCCAGCGACAGGGCCATTGATGGCCTCAACCTCCTCCCCACCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
CDS-3UTR CCA 90 bp CTGGGCAGGTGGAATTGTGCAGTCCCCCTGCGTCTGCAGGTGCTGTCTGTCTGGTGTGCTGCCCGAGGGTaGCCGCCATCAGCGTGTCGC +
Preference number: 4 (lower is better)
Translates to: LGRWNCAVPLRLQVLSVWCAARG*PPSACR
Trigger: GCGACACGCTGATGGCGGCCACCCTCGGGCAGCACA...CCAGACAGACAGCACCTGCAGACGCAGGGGGACTGCACAATTCCACCTGCCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
CDS-3UTR CCA 90 bp GTGCAGTCCCCCTGCGTCTGCAGGTGCTGTCTGTCTGGCTTGGGCAGGGTTGGGGCTGTCTGTCTGGCTTaGGCAGGGTTGGGGGAGGAC +
Preference number: 4 (lower is better)
Translates to: VQSPCVCRCCLSGLGRVGAVCLA*AGLGED
Trigger: GTCCTCCCCCAACCCTGCCCAAGCCAGACAGACAGC...CCCAACCCTGCCCAAGCCAGACAGACAGCACCTGCAGACGCAGGGGGACTGCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
CDS-3UTR TCA 90 bp TGTGCAGTCCCCCTGCGTCTGCAGGTGCTGTCTGTCTGGCTTGGGCAGGGTTGGCCATACCGCCCTCGCTaGCTGGTGCCCAAGAAGGGT +
Preference number: 4 (lower is better)
Translates to: CAVPLRLQVLSVWLGQGWPYRPR*LVPKKG
Trigger: ACCCTTCTTGGGCACCAGTCAGCGAGGGCGGTATGG...CCAACCCTGCCCAAGCCAGACAGACAGCACCTGCAGACGCAGGGGGACTGCACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
CDS-3UTR TCA 90 bp CAGTTCATGACCGCCCAGTTGCACACGTTGAGCTGGGGCTGCGCGGGGACCAAGGTCCAGGTCCAGAAGTaGGCCTTGTGCTGCCCGAGG +
Preference number: 4 (lower is better)
Translates to: QFMTAQLHTLSWGCAGTKVQVQK*ALCCPR
Trigger: CCTCGGGCAGCACAAGGCTCACTTCTGGACCTGGAC...CTTGGTCCCCGCGCAGCCCCAGCTCAACGTGTGCAACTGGGCGGTCATGAACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
CDS-3UTR GCA 90 bp GTCCTGGGCAGGTGGAATTGTGCAGTCCCCCTGCGTCTGCAGGTGCTGTCTGTCCCGTCCTGTGAGCAGTaGCGCCCTCGATGGCGAGCA +
Preference number: 4 (lower is better)
Translates to: VLGRWNCAVPLRLQVLSVPSCEQ*RPRWRA
Trigger: TGCTCGCCATCGAGGGCGGCACTGCTCACAGGACGG...GACAGACAGCACCTGCAGACGCAGGGGGACTGCACAATTCCACCTGCCCAGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000268695.10
CDS-3UTR GCA 90 bp GGTCCTGGGCAGGTGGAATTGTGCAGTCCCCCTGCGTCTGCAGGTGCTGTCTGTGGAGGCATAGACGGGTaGGTGCGTGGCGTCGACAGC +
Preference number: 4 (lower is better)
Translates to: GPGQVELCSPPASAGAVCGGIDG*VRGVDS
Trigger: GCTGTCGACGCCACGCACGCACCCGTCTATGCCTCC...ACAGACAGCACCTGCAGACGCAGGGGGACTGCACAATTCCACCTGCCCAGGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
CDS-3UTR GCA 90 bp CCATCCTTCCTCCAGGCACTTGCAGGGCCAACCGGAGATTCTAGGCCTGGCCTGGTGGCTCACCTGGCCTaGAGTGACGTGCCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: PSFLQALAGPTGDSRPGLVAHLA*SDVPWP
Trigger: TGGCCAGGGCACGTCACTGCAGGCCAGGTGAGCCAC...CAGGCCAGGCCTAGAATCTCCGGTTGGCCCTGCAAGTGCCTGGAGGAAGGATGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268695.10
ENST00000567525.5
ENST00000568613.5
CDS-3UTR GCA 90 bp CTGGGGTCCTGCACGGTGACCCATGCCCCAGGCAGGCTCATTCCTGAGTCTCCACTGCACGGTGACCCATaGCCCAGGCAGGCTCATTCC +
Preference number: 4 (lower is better)
Translates to: LGSCTVTHAPGRLIPESPLHGDP*PRQAHS
Trigger: GGAATGAGCCTGCCTGGGGCATGGGTCACCGTGCAG...TGGAGACTCAGGAATGAGCCTGCCTGGGGCATGGGTCACCGTGCAGGACCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569433.1
CDS-3UTR CCA 90 bp GTCCTGGGCAGGTGGAATTGTGCAGTCCCCCTGCGTCTGCAGGTGCTGTCTGTCCAGTGCCGCCCTCGATaGCGAGCACAGAGGGTTGGC +
Preference number: 4 (lower is better)
Translates to: VLGRWNCAVPLRLQVLSVQCRPR*RAQRVG
Trigger: GCCAACCCTCTGTGCTCGCCATCGAGGGCGGCACTG...GACAGACAGCACCTGCAGACGCAGGGGGACTGCACAATTCCACCTGCCCAGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000268695.10
CDS-3UTR CCA 90 bp TGGGGCTGCGCGGGGACCAAGGCCTCCTGGTGCTGCTGGACGACCGAGGTGATCTGGCATGGGCGTTGGTaGTGTAGAAGCCATTGCGGA +
Preference number: 4 (lower is better)
Translates to: WGCAGTKASWCCWTTEVIWHGRW*CRSHCG
Trigger: TCCGCAATGGCTTCTACACCACCAACGCCCATGCCA...GATCACCTCGGTCGTCCAGCAGCACCAGGAGGCCTTGGTCCCCGCGCAGCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
CDS-3UTR CCA 90 bp GTGGGGAGGAGGTTGAGGCCATCAATGGCCCTGTCGCTGGGCGGCGTCAGGCCCTGCCCAAGAAGGGTTTaGAGGCATAGACGGGTGCGT +
Preference number: 4 (lower is better)
Translates to: VGRRLRPSMALSLGGVRPCPRRV*RHRRVR
Trigger: ACGCACCCGTCTATGCCTCCAAACCCTTCTTGGGCA...GGGCCTGACGCCGCCCAGCGACAGGGCCATTGATGGCCTCAACCTCCTCCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
CDS-3UTR CCA 90 bp CCGGACGGCGTCTCCATACCGCCCTCGCTGACTGGTGCCCAAGAAGGGTTTGGAGGGTCCCGTCCCAGGTaGAAGATCAGGGGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: PDGVSIPPSLTGAQEGFGGSRPR*KIRGSF
Trigger: GAAGCTGCCCCTGATCTTCCACCTGGGACGGGACCC...TCCAAACCCTTCTTGGGCACCAGTCAGCGAGGGCGGTATGGAGACGCCGTCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
CDS-3UTR CCA 90 bp GCTGCCACCTTGTTCGGGGGCGGAAATGAGGGCAGCGCCGTTGTCCGACGTGAAGCCTCCTGGTGCTGCTaGACGACCGAGGTGATCCTG +
Preference number: 4 (lower is better)
Translates to: AATLFGGGNEGSAVVRREASWCC*TTEVIL
Trigger: CAGGATCACCTCGGTCGTCCAGCAGCACCAGGAGGC...TTCACGTCGGACAACGGCGCTGCCCTCATTTCCGCCCCCGAACAAGGTGGCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
CDS-3UTR TCA 90 bp ACCGACGGCCCAAAACTGTCTGGTACTCGGTGTCGTCCCAGTCCTCACACACAACCATCCCCGCGGCGCTaGGCACCAGCAACAGCTGCC +
Preference number: 4 (lower is better)
Translates to: TDGPKLSGTRCRPSPHTQPSPRR*APATAA
Trigger: GGCAGCTGTTGCTGGTGCTCAGCGCCGCGGGGATGG...TTGTGTGTGAGGACTGGGACGACACCGAGTACCAGACAGTTTTGGGCCGTCGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569433.1
CDS-3UTR TCA 90 bp CCATCCTTCCTCCAGGCACTTGCAGGGCCAACCGGAGATTCTAGGCCTGGCCTGTGGAACTGGGGCCTGTaGCCCAGATGCCACTTGCCG +
Preference number: 4 (lower is better)
Translates to: PSFLQALAGPTGDSRPGLWNWGL*PRCHLP
Trigger: CGGCAAGTGGCATCTGGGTCACAGGCCCCAGTTCCA...CAGGCCAGGCCTAGAATCTCCGGTTGGCCCTGCAAGTGCCTGGAGGAAGGATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000568613.5
CDS-3UTR TCA 90 bp CAGTTCATGACCGCCCAGTTGCACACGTTGAGCTGGGGCTGCGCGGGGACCAAGGCAGGTAGATCTGGGTaGGGTTGGCTTCCCCCGTCT +
Preference number: 4 (lower is better)
Translates to: QFMTAQLHTLSWGCAGTKAGRSG*GWLPPS
Trigger: AGACGGGGGAAGCCAACCTCACCCAGATCTACCTGC...CTTGGTCCCCGCGCAGCCCCAGCTCAACGTGTGCAACTGGGCGGTCATGAACTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
CDS-3UTR TCA 90 bp CGGCGTCTCCATACCGCCCTCGCTGACTGGTGCCCAAGAAGGGTTTGGAGGCATCCATACCGCCCTCGCTaGCTGGTGCCCAAGAAGGGT +
Preference number: 4 (lower is better)
Translates to: RRLHTALADWCPRRVWRHPYRPR*LVPKKG
Trigger: ACCCTTCTTGGGCACCAGTCAGCGAGGGCGGTATGG...ATGCCTCCAAACCCTTCTTGGGCACCAGTCAGCGAGGGCGGTATGGAGACGCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
CDS-3UTR TCA 90 bp TGTCATCAATCTCCCGGACGGCGTCTCCATACCGCCCTCGCTGACTGGTGCCCACCATACCGCCCTCGCTaGCTGGTGCCCAAGAAGGGT +
Preference number: 4 (lower is better)
Translates to: CHQSPGRRLHTALADWCPPYRPR*LVPKKG
Trigger: ACCCTTCTTGGGCACCAGTCAGCGAGGGCGGTATGG...TGGGCACCAGTCAGCGAGGGCGGTATGGAGACGCCGTCCGGGAGATTGATGACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
CDS-3UTR TCA 90 bp GAGGAGGTTGAGGCCATCAATGGCCCTGTCGCTGGGCGGCGTCAGGCCCGCAAGCGCCGTTGTCCGACGTaGAGAAGACGAAGGTGTTGT +
Preference number: 4 (lower is better)
Translates to: EEVEAINGPVAGRRQARKRRCPT*RRRRCC
Trigger: ACAACACCTTCGTCTTCTTCACGTCGGACAACGGCG...CTTGCGGGCCTGACGCCGCCCAGCGACAGGGCCATTGATGGCCTCAACCTCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
CDS-3UTR TCA 90 bp GTCCTGGGCAGGTGGAATTGTGCAGTCCCCCTGCGTCTGCAGGTGCTGTCTGTCGGGTGGGGAGGAGGTTaGGGCCATCAATGGCCCTGT +
Preference number: 4 (lower is better)
Translates to: VLGRWNCAVPLRLQVLSVGWGGG*GHQWPC
Trigger: ACAGGGCCATTGATGGCCTCAACCTCCTCCCCACCC...GACAGACAGCACCTGCAGACGCAGGGGGACTGCACAATTCCACCTGCCCAGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
CDS-3UTR TCA 90 bp TGGCCTGAGTCTGCGCAGGTGCTAGTGGGACCAGAGGCACTTCTTGGGAATGGACCCAGTTGCACACGTTaGGCTGGGGCTGCGCGGGGA +
Preference number: 4 (lower is better)
Translates to: WPESAQVLVGPEALLGNGPSCTR*AGAARG
Trigger: TCCCCGCGCAGCCCCAGCTCAACGTGTGCAACTGGG...TCCATTCCCAAGAAGTGCCTCTGGTCCCACTAGCACCTGCGCAGACTCAGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
CDS-3UTR TCA 90 bp ACGGTGACCCATGCCCCAGGCAGGCTCATTCCTGAGTCTCCAGGTGGCTCCCACCAGCACAGGTGGGTCTaGAGGCACCTGTCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: TVTHAPGRLIPESPGGSHQHRWV*RHLSGS
Trigger: AGACCCTGACAGGTGCCTTCAGACCCACCTGTGCTG...GTGGGAGCCACCTGGAGACTCAGGAATGAGCCTGCCTGGGGCATGGGTCACCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569433.1
CDS-3UTR GCA 90 bp GGAGGCTTCACCTGCAGAGCCCAGCTCATCCAGCGAAGCTATGCTGGCCCAGAAAGCACCAGCAACAGCTaGCACCACCTCGTCGCCGCG +
Preference number: 4 (lower is better)
Translates to: GGFTCRAQLIQRSYAGPESTSNS*HHLVAA
Trigger: CGCGGCGACGAGGTGGTGGCAGCTGTTGCTGGTGCT...TTCTGGGCCAGCATAGCTTCGCTGGATGAGCTGGGCTCTGCAGGTGAAGCCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568311.1
CDS-3UTR GCA 90 bp GCGACACCGACGGCCCAAAACTGTCTGGTACTCGGTGTCGTCCCAGTCCTCACAAGCACCAGCAACAGCTaGCACCACCTCGTCGCCGCG +
Preference number: 4 (lower is better)
Translates to: ATPTAQNCLVLGVVPVLTSTSNS*HHLVAA
Trigger: CGCGGCGACGAGGTGGTGGCAGCTGTTGCTGGTGCT...TGTGAGGACTGGGACGACACCGAGTACCAGACAGTTTTGGGCCGTCGGTGTCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569433.1
CDS-3UTR GCA 90 bp AATTGTGCAGTCCCCCTGCGTCTGCAGGTGCTGTCTGTCTGGCTTGGGCAGGGTAGCTCCGGCAGGAGCTaGTCCGAGTCTGGGATGCCG +
Preference number: 4 (lower is better)
Translates to: NCAVPLRLQVLSVWLGQGSSGRS*SESGMP
Trigger: CGGCATCCCAGACTCGGAGCAGCTCCTGCCGGAGCT...ACCCTGCCCAAGCCAGACAGACAGCACCTGCAGACGCAGGGGGACTGCACAATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
CDS-3UTR GCA 90 bp CCAGAGCCATCCTTCCTCCAGGCACTTGCAGGGCCAACCGGAGATTCTAGGCCTAGCTCCGGCAGGAGCTaGTCCGAGTCTGGGATGCCG +
Preference number: 4 (lower is better)
Translates to: PEPSFLQALAGPTGDSRPSSGRS*SESGMP
Trigger: CGGCATCCCAGACTCGGAGCAGCTCCTGCCGGAGCT...AGGCCTAGAATCTCCGGTTGGCCCTGCAAGTGCCTGGAGGAAGGATGGCTCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268695.10
ENST00000567525.5
ENST00000568613.5
CDS-3UTR GCA 90 bp CTCTCCCCTGGGTCCCGTCCCAGGTGGAAGATCAGGGGCAGCTTCGTGTGGTCTGTGTTGTCCGCGACGTaGAGGTCTTGGAGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: LSPGSRPRWKIRGSFVWSVLSAT*RSWRSS
Trigger: GGAGCTCCTCCAAGACCTGCACGTCGCGGACAACAC...AGACCACACGAAGCTGCCCCTGATCTTCCACCTGGGACGGGACCCAGGGGAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
CDS-3UTR GCA 90 bp TGTGCAGTCCCCCTGCGTCTGCAGGTGCTGTCTGTCTGGCTTGGGCAGGGTTGGACAGAAAGGGGCCGTTaGTGCCACCTTGTTCGGGGG +
Preference number: 4 (lower is better)
Translates to: CAVPLRLQVLSVWLGQGWTERGR*CHLVRG
Trigger: CCCCCGAACAAGGTGGCAGCAACGGCCCCTTTCTGT...CCAACCCTGCCCAAGCCAGACAGACAGCACCTGCAGACGCAGGGGGACTGCACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
CDS-3UTR GCA 90 bp GCTGCCACCTTGTTCGGGGGCGGAAATGAGGGCAGCGCCGTTGTCCGACGTGAAAAGGCCTCCTGGTGCTaGTGGACGACCGAGGTGATC +
Preference number: 4 (lower is better)
Translates to: AATLFGGGNEGSAVVRREKASWC*WTTEVI
Trigger: GATCACCTCGGTCGTCCAGCAGCACCAGGAGGCCTT...TTCACGTCGGACAACGGCGCTGCCCTCATTTCCGCCCCCGAACAAGGTGGCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
CDS-3UTR GCA 90 bp GTTGGTCCAGGTCCAGAAGTGAGCCTTGTGCTGCCCGAGGGTGGCCGCCATCAGTTCACAGCCCGGAGGTaGCCAGTTCATGACCGCCCA +
Preference number: 4 (lower is better)
Translates to: VGPGPEVSLVLPEGGRHQFTARR*PVHDRP
Trigger: TGGGCGGTCATGAACTGGGCACCTCCGGGCTGTGAA...CTGATGGCGGCCACCCTCGGGCAGCACAAGGCTCACTTCTGGACCTGGACCAAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
CDS-3UTR GCA 90 bp AGCACAGGTGGGTCTGAAGGCACCTGTCAGGGTCTCTGCTGGTCGGAGCCAGCAGTGTGTCTGGGGTCCTaGACGGTGACCCATGCCCCA +
Preference number: 4 (lower is better)
Translates to: STGGSEGTCQGLCWSEPAVCLGS*TVTHAP
Trigger: TGGGGCATGGGTCACCGTGCAGGACCCCAGACACAC...TGCTGGCTCCGACCAGCAGAGACCCTGACAGGTGCCTTCAGACCCACCTGTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569433.1
CDS-3UTR CCA 90 bp GGGTTGGGGGAGGACCGAGGCCAGAGCCATCCTTCCTCCAGGCACTTGCAGGGCTGGCATGGGCGTTGGTaGTGTAGAAGCCATTGCGGA +
Preference number: 4 (lower is better)
Translates to: GLGEDRGQSHPSSRHLQGWHGRW*CRSHCG
Trigger: TCCGCAATGGCTTCTACACCACCAACGCCCATGCCA...GCCCTGCAAGTGCCTGGAGGAAGGATGGCTCTGGCCTCGGTCCTCCCCCAACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268695.10
ENST00000567525.5
ENST00000568613.5
CDS-3UTR CCA 90 bp CATCAGCGTGTCGCCACGGTAATAGAAGATAGGCCTGTCCATCAGCCGGCCCTGCAATGGCCCTGTCGCTaGGCGGCGTCAGGCCCGCAA +
Preference number: 4 (lower is better)
Translates to: HQRVATVIEDRPVHQPALQWPCR*AASGPQ
Trigger: TTGCGGGCCTGACGCCGCCCAGCGACAGGGCCATTG...CAGGGCCGGCTGATGGACAGGCCTATCTTCTATTACCGTGGCGACACGCTGATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
CDS-3UTR CCA 90 bp AGGCAAACTGTATCCCCAGCCACCTCAGGCACCTGTTGTCAGGACCTCCTGAGGTGTGCTGCCCGAGGGTaGCCGCCATCAGCGTGTCGC +
Preference number: 4 (lower is better)
Translates to: RQTVSPATSGTCCQDLLRCAARG*PPSACR
Trigger: GCGACACGCTGATGGCGGCCACCCTCGGGCAGCACA...CCTCAGGAGGTCCTGACAACAGGTGCCTGAGGTGGCTGGGGATACAGTTTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
CDS-3UTR CCA 90 bp GACGTGAAGAAGACGAAGGTGTTGTCCGCGACGTGCAGGTCTTGGAGGAGCTCCTGTGCTGCCCGAGGGTaGCCGCCATCAGCGTGTCGC +
Preference number: 4 (lower is better)
Translates to: DVKKTKVLSATCRSWRSSCAARG*PPSACR
Trigger: GCGACACGCTGATGGCGGCCACCCTCGGGCAGCACA...GGAGCTCCTCCAAGACCTGCACGTCGCGGACAACACCTTCGTCTTCTTCACGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
CDS-3UTR CCA 90 bp CGGCGTCTCCATACCGCCCTCGCTGACTGGTGCCCAAGAAGGGTTTGGAGGCATCTGCTGAGGGCCTCCTaGTACTCGGCGCTGGCAAAG +
Preference number: 4 (lower is better)
Translates to: RRLHTALADWCPRRVWRHLLRAS*YSALAK
Trigger: CTTTGCCAGCGCCGAGTACCAGGAGGCCCTCAGCAG...ATGCCTCCAAACCCTTCTTGGGCACCAGTCAGCGAGGGCGGTATGGAGACGCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
CDS-3UTR CCA 90 bp CTGGGCAGGTGGAATTGTGCAGTCCCCCTGCGTCTGCAGGTGCTGTCTGTCTGGGCCTCCTGGTGCTGCTaGACGACCGAGGTGATCCTG +
Preference number: 4 (lower is better)
Translates to: LGRWNCAVPLRLQVLSVWASWCC*TTEVIL
Trigger: CAGGATCACCTCGGTCGTCCAGCAGCACCAGGAGGC...CCAGACAGACAGCACCTGCAGACGCAGGGGGACTGCACAATTCCACCTGCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
CDS-3UTR CCA 90 bp CTCTCCCCTGGGTCCCGTCCCAGGTGGAAGATCAGGGGCAGCTTCGTGTGGTCTGCCAGGGTCAGGTCCTaGGCAGGTGGAATTGTGCAG +
Preference number: 4 (lower is better)
Translates to: LSPGSRPRWKIRGSFVWSARVRS*AGGIVQ
Trigger: CTGCACAATTCCACCTGCCCAGGACCTGACCCTGGC...AGACCACACGAAGCTGCCCCTGATCTTCCACCTGGGACGGGACCCAGGGGAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567525.5
CDS-3UTR TCA 90 bp GGGAACCTCTCCCCTGGGTCCCGTCCCAGGTGGAAGATCAGGGGCAGCTTCGTGTGCCGACAATCTTGCTaGCGTAGCCGGCCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: GNLSPGSRPRWKIRGSFVCRQSC*RSRPSS
Trigger: TGAAGAAGGCCGGCTACGTCAGCAAGATTGTCGGCA...CACGAAGCTGCCCCTGATCTTCCACCTGGGACGGGACCCAGGGGAGAGGTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
CDS-3UTR TCA 90 bp GGACAAAGGACAGACGGAACTGGAAGTCATCCCTCTGGGGCTCCCCTGAGACAAGTTCGGGGGCGGAAATaGGGGCAGCGCCGTTGTCCG +
Preference number: 4 (lower is better)
Translates to: GQRTDGTGSHPSGAPLRQVRGRK*GQRRCP
Trigger: CGGACAACGGCGCTGCCCTCATTTCCGCCCCCGAAC...TTGTCTCAGGGGAGCCCCAGAGGGATGACTTCCAGTTCCGTCTGTCCTTTGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
CDS-3UTR TCA 90 bp GCGCAGGTGCTAGTGGGACCAGAGGCACTTCTTGGGAATGGATTCTGGAGGTGTGTTCGGGGGCGGAAATaGGGGCAGCGCCGTTGTCCG +
Preference number: 4 (lower is better)
Translates to: AQVLVGPEALLGNGFWRCVRGRK*GQRRCP
Trigger: CGGACAACGGCGCTGCCCTCATTTCCGCCCCCGAAC...ACACCTCCAGAATCCATTCCCAAGAAGTGCCTCTGGTCCCACTAGCACCTGCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
CDS-3UTR TCA 90 bp CCAGAGCCATCCTTCCTCCAGGCACTTGCAGGGCCAACCGGAGATTCTAGGCCTGTCCAGGTCCAGAAGTaGGCCTTGTGCTGCCCGAGG +
Preference number: 4 (lower is better)
Translates to: PEPSFLQALAGPTGDSRPVQVQK*ALCCPR
Trigger: CCTCGGGCAGCACAAGGCTCACTTCTGGACCTGGAC...AGGCCTAGAATCTCCGGTTGGCCCTGCAAGTGCCTGGAGGAAGGATGGCTCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268695.10
ENST00000567525.5
ENST00000568613.5
CDS-3UTR TCA 90 bp GCTGCCACCTTGTTCGGGGGCGGAAATGAGGGCAGCGCCGTTGTCCGACGTGAAGTGAGTTGTGACCCCTaGAACGTTCTGCCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: AATLFGGGNEGSAVVRREVSCDP*NVLPRA
Trigger: TGCCCTGGGCAGAACGTTTCAGGGGTCACAACTCAC...TTCACGTCGGACAACGGCGCTGCCCTCATTTCCGCCCCCGAACAAGGTGGCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
CDS-3UTR TCA 90 bp GGGTTGGGGGAGGACCGAGGCCAGAGCCATCCTTCCTCCAGGCACTTGCAGGGCCCAGATTGTGAGTTGTaGCCCCTGAAACGTTCTGCC +
Preference number: 4 (lower is better)
Translates to: GLGEDRGQSHPSSRHLQGPDCEL*PLKRSA
Trigger: GGCAGAACGTTTCAGGGGTCACAACTCACAATCTGG...GCCCTGCAAGTGCCTGGAGGAAGGATGGCTCTGGCCTCGGTCCTCCCCCAACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268695.10
ENST00000567525.5
ENST00000568613.5
CDS-3UTR TCA 90 bp ATGACCGCCCAGTTGCACACGTTGAGCTGGGGCTGCGCGGGGACCAAGGCCTCCCCAGATTGTGAGTTGTaGCCCCTGAAACGTTCTGCC +
Preference number: 4 (lower is better)
Translates to: MTAQLHTLSWGCAGTKASPDCEL*PLKRSA
Trigger: GGCAGAACGTTTCAGGGGTCACAACTCACAATCTGG...GGAGGCCTTGGTCCCCGCGCAGCCCCAGCTCAACGTGTGCAACTGGGCGGTCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
CDS-3UTR TCA 90 bp GTTGGGGGATCCAAACCACTCATCAAATCCGTGCTTCAGGGGGTGGAACTGGGGCCCAGTTGCACACGTTaGGCTGGGGCTGCGCGGGGA +
Preference number: 4 (lower is better)
Translates to: VGGSKPLIKSVLQGVELGPSCTR*AGAARG
Trigger: TCCCCGCGCAGCCCCAGCTCAACGTGTGCAACTGGG...CCCCAGTTCCACCCCCTGAAGCACGGATTTGATGAGTGGTTTGGATCCCCCAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENST00000568613.5
CDS-3UTR TCA 90 bp GTTGGTCCAGGTCCAGAAGTGAGCCTTGTGCTGCCCGAGGGTGGCCGCCATCAGATTCTAGGCCTGGCCTaGGTCTGCGCAGGTGCTAGT +
Preference number: 4 (lower is better)
Translates to: VGPGPEVSLVLPEGGRHQILGLA*VCAGAS
Trigger: ACTAGCACCTGCGCAGACTCAGGCCAGGCCTAGAAT...CTGATGGCGGCCACCCTCGGGCAGCACAAGGCTCACTTCTGGACCTGGACCAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
CDS-3UTR TCA 90 bp AGGCAAACTGTATCCCCAGCCACCTCAGGCACCTGTTGTCAGGACCTCCTGAGGCGAGGAGGAGGGTCCTaGAATCTGAGGCGCCGTGGG +
Preference number: 4 (lower is better)
Translates to: RQTVSPATSGTCCQDLLRRGGGS*NLRRRG
Trigger: CCCACGGCGCCTCAGATTTCAGGACCCTCCTCCTCG...CCTCAGGAGGTCCTGACAACAGGTGCCTGAGGTGGCTGGGGATACAGTTTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
CDS-3UTR TCA 90 bp GAGGGTGGGGAGGAGGTTGAGGCCATCAATGGCCCTGTCGCTGGGCGGCGTCAGCCTCTGGGGCTCCCCTaGGACAAACGCTTATATGAT +
Preference number: 4 (lower is better)
Translates to: EGGEEVEAINGPVAGRRQPLGLP*DKRLYD
Trigger: ATCATATAAGCGTTTGTCTCAGGGGAGCCCCAGAGG...CTGACGCCGCCCAGCGACAGGGCCATTGATGGCCTCAACCTCCTCCCCACCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000567525.5
CDS-3UTR TCA 90 bp ATTGTGCAGTCCCCCTGCGTCTGCAGGTGCTGTCTGTCTGGCTTGGGCAGGGTTGCCCTCGGTCGTCCATaGGCAGGAGCAGGATGTTGG +
Preference number: 4 (lower is better)
Translates to: IVQSPCVCRCCLSGLGRVALGRP*AGAGCW
Trigger: CCAACATCCTGCTCCTGCTCATGGACGACCGAGGGC...AACCCTGCCCAAGCCAGACAGACAGCACCTGCAGACGCAGGGGGACTGCACAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567525.5
CDS-3UTR GCA 90 bp GCAAACTGTATCCCCAGCCACCTCAGGCACCTGTTGTCAGGACCTCCTGAGGCTAGCACCAGCAACAGCTaGCACCACCTCGTCGCCGCG +
Preference number: 4 (lower is better)
Translates to: ANCIPSHLRHLLSGPPEASTSNS*HHLVAA
Trigger: CGCGGCGACGAGGTGGTGGCAGCTGTTGCTGGTGCT...AGCCTCAGGAGGTCCTGACAACAGGTGCCTGAGGTGGCTGGGGATACAGTTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268695.10
CDS-3UTR GCA 90 bp CCAGAGCCATCCTTCCTCCAGGCACTTGCAGGGCCAACCGGAGATTCTAGGCCTGCTCCGAGTCTGGGATaGCGCCCACAATCTCCTGCG +
Preference number: 4 (lower is better)
Translates to: PEPSFLQALAGPTGDSRPAPSLG*RPQSPA
Trigger: CGCAGGAGATTGTGGGCGGCATCCCAGACTCGGAGC...AGGCCTAGAATCTCCGGTTGGCCCTGCAAGTGCCTGGAGGAAGGATGGCTCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268695.10
ENST00000567525.5
ENST00000568613.5
CDS-3UTR GCA 90 bp CCAGAGCCATCCTTCCTCCAGGCACTTGCAGGGCCAACCGGAGATTCTAGGCCTACCAAGGCCTCCTGGTaGTGCTGGACGACCGAGGTG +
Preference number: 4 (lower is better)
Translates to: PEPSFLQALAGPTGDSRPTKASW*CWTTEV
Trigger: CACCTCGGTCGTCCAGCAGCACCAGGAGGCCTTGGT...AGGCCTAGAATCTCCGGTTGGCCCTGCAAGTGCCTGGAGGAAGGATGGCTCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268695.10
ENST00000567525.5
ENST00000568613.5
CDS-3UTR GCA 90 bp CAGGGTCAGGTCCTGGGCAGGTGGAATTGTGCAGTCCCCCTGCGTCTGCAGGTGCTTCCTCCAGGCACTTaGAGGGCCAACCGGAGATTC +
Preference number: 4 (lower is better)
Translates to: QGQVLGRWNCAVPLRLQVLPPGT*RANRRF
Trigger: GAATCTCCGGTTGGCCCTGCAAGTGCCTGGAGGAAG...CACCTGCAGACGCAGGGGGACTGCACAATTCCACCTGCCCAGGACCTGACCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
CDS-3UTR CCA 90 bp CAGAGCCCAGCTCATCCAGCGAAGCTATGCTGGCCCAGAAGGAGTTACACAATGCGACAACCGCCGCCATaGCAACCACGGGAGCCGCGG +
Preference number: 4 (lower is better)
Translates to: QSPAHPAKLCWPRRSYTMRQPPP*QPREPR
Trigger: CCGCGGCTCCCGTGGTTGCCATGGCGGCGGTTGTCG...CATTGTGTAACTCCTTCTGGGCCAGCATAGCTTCGCTGGATGAGCTGGGCTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568311.1
CDS-3UTR CCA 90 bp GGGTTGGGGGAGGACCGAGGCCAGAGCCATCCTTCCTCCAGGCACTTGCAGGGCCAGGGATGTTGGGCCTaGCCTTGTTGTCATAAGGTC +
Preference number: 4 (lower is better)
Translates to: GLGEDRGQSHPSSRHLQGQGCWA*PCCHKV
Trigger: GACCTTATGACAACAAGGCCAGGCCCAACATCCCTG...GCCCTGCAAGTGCCTGGAGGAAGGATGGCTCTGGCCTCGGTCCTCCCCCAACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000568613.5
CDS-3UTR CCA 90 bp TGCTGTCATCAATCTCCCGGACGGCGTCTCCATACCGCCCTCGCTGACTGGTGCACCGCCCTCGCTGACTaGTGCCCAAGAAGGGTTTGG +
Preference number: 4 (lower is better)
Translates to: CCHQSPGRRLHTALADWCTALAD*CPRRVW
Trigger: CCAAACCCTTCTTGGGCACCAGTCAGCGAGGGCGGT...GCACCAGTCAGCGAGGGCGGTATGGAGACGCCGTCCGGGAGATTGATGACAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
CDS-3UTR CCA 90 bp CCAGAGCCATCCTTCCTCCAGGCACTTGCAGGGCCAACCGGAGATTCTAGGCCTAGCTGGTGGCTCACCTaGCCTGCAGTGACGTGCCCT +
Preference number: 4 (lower is better)
Translates to: PEPSFLQALAGPTGDSRPSWWLT*PAVTCP
Trigger: AGGGCACGTCACTGCAGGCCAGGTGAGCCACCAGCT...AGGCCTAGAATCTCCGGTTGGCCCTGCAAGTGCCTGGAGGAAGGATGGCTCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268695.10
ENST00000567525.5
ENST00000568613.5
CDS-3UTR CCA 90 bp TGCTGTCATCAATCTCCCGGACGGCGTCTCCATACCGCCCTCGCTGACTGGTGCATGATGCTGCCCAGCTaGTGGCTCACCTGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: CCHQSPGRRLHTALADWCMMLPS*WLTWPA
Trigger: TGCAGGCCAGGTGAGCCACCAGCTGGGCAGCATCAT...GCACCAGTCAGCGAGGGCGGTATGGAGACGCCGTCCGGGAGATTGATGACAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
CDS-3UTR CCA 90 bp GGCAGGTGGAATTGTGCAGTCCCCCTGCGTCTGCAGGTGCTGTCTGTCTGGCTTCTGCTGAGGGCCTCCTaGTACTCGGCGCTGGCAAAG +
Preference number: 4 (lower is better)
Translates to: GRWNCAVPLRLQVLSVWLLLRAS*YSALAK
Trigger: CTTTGCCAGCGCCGAGTACCAGGAGGCCCTCAGCAG...AAGCCAGACAGACAGCACCTGCAGACGCAGGGGGACTGCACAATTCCACCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
CDS-3UTR CCA 90 bp GTATCCCCAGCCACCTCAGGCACCTGTTGTCAGGACCTCCTGAGGCTGTCACAGTTGCACACGTTGAGCTaGGGCTGCGCGGGGACCAAG +
Preference number: 4 (lower is better)
Translates to: VSPATSGTCCQDLLRLSQLHTLS*GCAGTK
Trigger: CTTGGTCCCCGCGCAGCCCCAGCTCAACGTGTGCAA...CTGTGACAGCCTCAGGAGGTCCTGACAACAGGTGCCTGAGGTGGCTGGGGATAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
CDS-3UTR CCA 90 bp CCAGAGCCATCCTTCCTCCAGGCACTTGCAGGGCCAACCGGAGATTCTAGGCCTTTGCACACGTTGAGCTaGGGCTGCGCGGGGACCAAG +
Preference number: 4 (lower is better)
Translates to: PEPSFLQALAGPTGDSRPLHTLS*GCAGTK
Trigger: CTTGGTCCCCGCGCAGCCCCAGCTCAACGTGTGCAA...AGGCCTAGAATCTCCGGTTGGCCCTGCAAGTGCCTGGAGGAAGGATGGCTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268695.10
ENST00000567525.5
ENST00000568613.5
CDS-3UTR CCA 90 bp GGCCCCCACTGGTCAGCACAGGTGGGTCTGAAGGCACCTGTCAGGGTCTCTGCTCGGCCCAAAACTGTCTaGTACTCGGTGTCGTCCCAG +
Preference number: 4 (lower is better)
Translates to: GPHWSAQVGLKAPVRVSARPKTV*YSVSSQ
Trigger: CTGGGACGACACCGAGTACCAGACAGTTTTGGGCCG...AGCAGAGACCCTGACAGGTGCCTTCAGACCCACCTGTGCTGACCAGTGGGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569433.1
3UTR CAA 72 bp CCACCTTGTTCGGGGGCGGAAATGAGGGCAGCGCCGTaGTCCGACGTGAAGAAGACGAAGGTGTTGTCCGCG +
Preference number: 4 (lower is better)
Translates to: PPCSGAEMRAAP*SDVKKTKVLSA
Trigger: CGCGGACAACACCTTCGTCTTCTTCACGTCGGACAACGGCGCTGCCCTCATTTCCGCCCCCGAACAAGGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
CDS-3UTR TCA 90 bp GGACAAAGGACAGACGGAACTGGAAGTCATCCCTCTGGGGCTCCCCTGAGACAATGGGTAGCCGTCCTGTaGGCAGTGCCGCCCTCGATG +
Preference number: 4 (lower is better)
Translates to: GQRTDGTGSHPSGAPLRQWVAVL*AVPPSM
Trigger: CATCGAGGGCGGCACTGCTCACAGGACGGCTACCCA...TTGTCTCAGGGGAGCCCCAGAGGGATGACTTCCAGTTCCGTCTGTCCTTTGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268695.10
CDS-3UTR TCA 90 bp GAGGAGGTTGAGGCCATCAATGGCCCTGTCGCTGGGCGGCGTCAGGCCCGCAAGAATCAATGCCCTGTCTaGAGTTCTCCCAGGAGTTGG +
Preference number: 4 (lower is better)
Translates to: EEVEAINGPVAGRRQARKNQCPV*SSPRSW
Trigger: CCAACTCCTGGGAGAACTTCAGACAGGGCATTGATT...CTTGCGGGCCTGACGCCGCCCAGCGACAGGGCCATTGATGGCCTCAACCTCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
CDS-3UTR TCA 90 bp TGTCATCAATCTCCCGGACGGCGTCTCCATACCGCCCTCGCTGACTGGTGCCCAGTGAGTTGTGACCCCTaGAACGTTCTGCCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: CHQSPGRRLHTALADWCPVSCDP*NVLPRA
Trigger: TGCCCTGGGCAGAACGTTTCAGGGGTCACAACTCAC...TGGGCACCAGTCAGCGAGGGCGGTATGGAGACGCCGTCCGGGAGATTGATGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
CDS-3UTR TCA 90 bp TGCTGTCATCAATCTCCCGGACGGCGTCTCCATACCGCCCTCGCTGACTGGTGCATTCTAGGCCTGGCCTaGGTCTGCGCAGGTGCTAGT +
Preference number: 4 (lower is better)
Translates to: CCHQSPGRRLHTALADWCILGLA*VCAGAS
Trigger: ACTAGCACCTGCGCAGACTCAGGCCAGGCCTAGAAT...GCACCAGTCAGCGAGGGCGGTATGGAGACGCCGTCCGGGAGATTGATGACAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
CDS-3UTR TCA 90 bp GGCCCCCACTGGTCAGCACAGGTGGGTCTGAAGGCACCTGTCAGGGTCTCTGCTGTGATTCGTCGTCCATaGGCAGGAGCAGGATGTTGG +
Preference number: 4 (lower is better)
Translates to: GPHWSAQVGLKAPVRVSAVIRRP*AGAGCW
Trigger: CCAACATCCTGCTCCTGCTCATGGACGACGAATCAC...AGCAGAGACCCTGACAGGTGCCTTCAGACCCACCTGTGCTGACCAGTGGGGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569433.1
CDS-3UTR TCA 90 bp TCTGGTACTCGGTGTCGTCCCAGTCCTCACACACAACGTGAGCACGGCGGGACAAGGCAGGCTCATTCCTaGGTCTCCAGGTGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: SGTRCRPSPHTQREHGGTRQAHS*VSRWLP
Trigger: TGGGAGCCACCTGGAGACTCAGGAATGAGCCTGCCT...TGTCCCGCCGTGCTCACGTTGTGTGTGAGGACTGGGACGACACCGAGTACCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569433.1
CDS-3UTR TCA 90 bp TGGCCCCCACTGGTCAGCACAGGTGGGTCTGAAGGCACCTGTCAGGGTCTCTGCCCCAGGTGTGGCAGCTaGGGTTCAAGAATGGAAGTG +
Preference number: 4 (lower is better)
Translates to: WPPLVSTGGSEGTCQGLCPRCGS*GSRMEV
Trigger: CACTTCCATTCTTGAACCTCAGCTGCCACACCTGGG...GCAGAGACCCTGACAGGTGCCTTCAGACCCACCTGTGCTGACCAGTGGGGGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569433.1
CDS-3UTR TCA 90 bp CGGCGTCTCCATACCGCCCTCGCTGACTGGTGCCCAAGAAGGGTTTGGAGGCATCGTGCATGTCGTCCATaGGCAGGAGCAGGATGTTGG +
Preference number: 4 (lower is better)
Translates to: RRLHTALADWCPRRVWRHRACRP*AGAGCW
Trigger: CCAACATCCTGCTCCTGCTCATGGACGACATGCACG...ATGCCTCCAAACCCTTCTTGGGCACCAGTCAGCGAGGGCGGTATGGAGACGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568613.5
CDS-3UTR GCA 90 bp CCAGAGCCATCCTTCCTCCAGGCACTTGCAGGGCCAACCGGAGATTCTAGGCCTACAGAAAGGGGCCGTTaGTGCCACCTTGTTCGGGGG +
Preference number: 4 (lower is better)
Translates to: PEPSFLQALAGPTGDSRPTERGR*CHLVRG
Trigger: CCCCCGAACAAGGTGGCAGCAACGGCCCCTTTCTGT...AGGCCTAGAATCTCCGGTTGGCCCTGCAAGTGCCTGGAGGAAGGATGGCTCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268695.10
ENST00000567525.5
ENST00000568613.5
CDS-3UTR GCA 90 bp GCTGCTCCGAGTCTGGGATGCCGCCCACAATCTCCTGCGGTGTGTAGGCGTTTCACACCAGCATCTGCATaGTCGCAGGAGCTGGCCTCT +
Preference number: 4 (lower is better)
Translates to: AAPSLGCRPQSPAVCRRFTPASA*SQELAS
Trigger: AGAGGCCAGCTCCTGCGAGCATGCAGATGCTGGTGT...GAAACGCCTACACACCGCAGGAGATTGTGGGCGGCATCCCAGACTCGGAGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568613.5
CDS-3UTR CCA 90 bp GCTGAGGGCCTCCTGGTACTCGGCGCTGGCAAAGCTGAGGGGGAACCTCTCCCCGCGAGCACAGAGGGTTaGCAGAATAGAAGTTTGGGA +
Preference number: 4 (lower is better)
Translates to: AEGLLVLGAGKAEGEPLPASTEG*QNRSLG
Trigger: TCCCAAACTTCTATTCTGCCAACCCTCTGTGCTCGC...GGGGAGAGGTTCCCCCTCAGCTTTGCCAGCGCCGAGTACCAGGAGGCCCTCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568613.5
CDS-3UTR CCA 90 bp GCAAACTGTATCCCCAGCCACCTCAGGCACCTGTTGTCAGGACCTCCTGAGGCTAGACGGGTGCGTGCGTaGCGTCGACAGCCCAGTAGA +
Preference number: 4 (lower is better)
Translates to: ANCIPSHLRHLLSGPPEARRVRA*RRQPSR
Trigger: TCTACTGGGCTGTCGACGCCACGCACGCACCCGTCT...AGCCTCAGGAGGTCCTGACAACAGGTGCCTGAGGTGGCTGGGGATACAGTTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
CDS-3UTR CCA 90 bp GACGTGAAGAAGACGAAGGTGTTGTCCGCGACGTGCAGGTCTTGGAGGAGCTCCAGACGGGTGCGTGCGTaGCGTCGACAGCCCAGTAGA +
Preference number: 4 (lower is better)
Translates to: DVKKTKVLSATCRSWRSSRRVRA*RRQPSR
Trigger: TCTACTGGGCTGTCGACGCCACGCACGCACCCGTCT...GGAGCTCCTCCAAGACCTGCACGTCGCGGACAACACCTTCGTCTTCTTCACGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
CDS-3UTR CCA 90 bp CAGTTCATGACCGCCCAGTTGCACACGTTGAGCTGGGGCTGCGCGGGGACCAAGTGCCCAAGAAGGGTTTaGAGGCATAGACGGGTGCGT +
Preference number: 4 (lower is better)
Translates to: QFMTAQLHTLSWGCAGTKCPRRV*RHRRVR
Trigger: ACGCACCCGTCTATGCCTCCAAACCCTTCTTGGGCA...CTTGGTCCCCGCGCAGCCCCAGCTCAACGTGTGCAACTGGGCGGTCATGAACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
CDS-3UTR CCA 90 bp CCGGACGGCGTCTCCATACCGCCCTCGCTGACTGGTGCCCAAGAAGGGTTTGGAGCGACGTGCAGGTCTTaGAGGAGCTCCAGTATCTTC +
Preference number: 4 (lower is better)
Translates to: PDGVSIPPSLTGAQEGFGATCRS*RSSSIF
Trigger: GAAGATACTGGAGCTCCTCCAAGACCTGCACGTCGC...TCCAAACCCTTCTTGGGCACCAGTCAGCGAGGGCGGTATGGAGACGCCGTCCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
CDS-3UTR CCA 90 bp GTTGTCCGACGTGAAGAAGACGAAGGTGTTGTCCGCGACGTGCAGGTCTTGGAGTGCAGTGACGTGCCCTaGCCACCATGCGAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: VVRREEDEGVVRDVQVLECSDVP*PPCEGR
Trigger: CCTGCCCTCGCATGGTGGCCAGGGCACGTCACTGCA...CTCCAAGACCTGCACGTCGCGGACAACACCTTCGTCTTCTTCACGTCGGACAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
CDS-3UTR CCA 90 bp ACCTGCAGAGCCCAGCTCATCCAGCGAAGCTATGCTGGCCCAGAAGGAGTTACACGGACCCCTGGGCGCTaGAGAGCGTGCTCTGGAAAG +
Preference number: 4 (lower is better)
Translates to: TCRAQLIQRSYAGPEGVTRTPGR*RACSGK
Trigger: CTTTCCAGAGCACGCTCTCCAGCGCCCAGGGGTCCG...TGTAACTCCTTCTGGGCCAGCATAGCTTCGCTGGATGAGCTGGGCTCTGCAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568311.1
3UTR CAA 72 bp GCAGCGCCGTTGTCCGACGTGAAGAAGACGAAGGTGTaGTCCGCGACGTGCAGGTCTTGGAGGAGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: AAPLSDVKKTKV*SATCRSWRSSS
Trigger: ACTGGAGCTCCTCCAAGACCTGCACGTCGCGGACAACACCTTCGTCTTCTTCACGTCGGACAACGGCGCTGC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
CDS-3UTR TCA 90 bp CCCAGCTCATCCAGCGAAGCTATGCTGGCCCAGAAGGAGTTACACAATGAAAAGCCATCCCCGCGGCGCTaGGCACCAGCAACAGCTGCC +
Preference number: 4 (lower is better)
Translates to: PSSSSEAMLAQKELHNEKPSPRR*APATAA
Trigger: GGCAGCTGTTGCTGGTGCTCAGCGCCGCGGGGATGG...CTTTTCATTGTGTAACTCCTTCTGGGCCAGCATAGCTTCGCTGGATGAGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568311.1
CDS-3UTR TCA 90 bp GCAGGTGCTAGTGGGACCAGAGGCACTTCTTGGGAATGGATTCTGGAGGTGTCATCACCTGGCCTGCAGTaGCGTGCCCTGGCCACCATG +
Preference number: 4 (lower is better)
Translates to: AGASGTRGTSWEWILEVSSPGLQ*RALATM
Trigger: CATGGTGGCCAGGGCACGTCACTGCAGGCCAGGTGA...TGACACCTCCAGAATCCATTCCCAAGAAGTGCCTCTGGTCCCACTAGCACCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
CDS-3UTR TCA 90 bp GTTGGTCCAGGTCCAGAAGTGAGCCTTGTGCTGCCCGAGGGTGGCCGCCATCAGCCAGATTGTGAGTTGTaGCCCCTGAAACGTTCTGCC +
Preference number: 4 (lower is better)
Translates to: VGPGPEVSLVLPEGGRHQPDCEL*PLKRSA
Trigger: GGCAGAACGTTTCAGGGGTCACAACTCACAATCTGG...CTGATGGCGGCCACCCTCGGGCAGCACAAGGCTCACTTCTGGACCTGGACCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
CDS-3UTR TCA 90 bp GGCAGGTGGAATTGTGCAGTCCCCCTGCGTCTGCAGGTGCTGTCTGTCTGGCTTGTTGTCAGGACCTCCTaGGGCTGTCACAGGTGCATC +
Preference number: 4 (lower is better)
Translates to: GRWNCAVPLRLQVLSVWLVVRTS*GCHRCI
Trigger: GATGCACCTGTGACAGCCTCAGGAGGTCCTGACAAC...AAGCCAGACAGACAGCACCTGCAGACGCAGGGGGACTGCACAATTCCACCTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
CDS-3UTR GCA 90 bp GAGGAGGTTGAGGCCATCAATGGCCCTGTCGCTGGGCGGCGTCAGGCCCGCAAGCCAGTATCTTCCCAATaGTGTCATCAATCTCCCGGA +
Preference number: 4 (lower is better)
Translates to: EEVEAINGPVAGRRQARKPVSSQ*CHQSPG
Trigger: TCCGGGAGATTGATGACAGCATTGGGAAGATACTGG...CTTGCGGGCCTGACGCCGCCCAGCGACAGGGCCATTGATGGCCTCAACCTCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
CDS-3UTR GCA 90 bp GGGTTGGGGGAGGACCGAGGCCAGAGCCATCCTTCCTCCAGGCACTTGCAGGGCCCAGTATCTTCCCAATaGTGTCATCAATCTCCCGGA +
Preference number: 4 (lower is better)
Translates to: GLGEDRGQSHPSSRHLQGPVSSQ*CHQSPG
Trigger: TCCGGGAGATTGATGACAGCATTGGGAAGATACTGG...GCCCTGCAAGTGCCTGGAGGAAGGATGGCTCTGGCCTCGGTCCTCCCCCAACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268695.10
ENST00000567525.5
ENST00000568613.5
CDS-3UTR GCA 90 bp GACGTGAAGAAGACGAAGGTGTTGTCCGCGACGTGCAGGTCTTGGAGGAGCTCCGTGTTGTCCGCGACGTaGAGGTCTTGGAGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: DVKKTKVLSATCRSWRSSVLSAT*RSWRSS
Trigger: GGAGCTCCTCCAAGACCTGCACGTCGCGGACAACAC...GGAGCTCCTCCAAGACCTGCACGTCGCGGACAACACCTTCGTCTTCTTCACGTC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
CDS-3UTR GCA 90 bp GCAAACTGTATCCCCAGCCACCTCAGGCACCTGTTGTCAGGACCTCCTGAGGCTTTCACAGCCCGGAGGTaGCCAGTTCATGACCGCCCA +
Preference number: 4 (lower is better)
Translates to: ANCIPSHLRHLLSGPPEAFTARR*PVHDRP
Trigger: TGGGCGGTCATGAACTGGGCACCTCCGGGCTGTGAA...AGCCTCAGGAGGTCCTGACAACAGGTGCCTGAGGTGGCTGGGGATACAGTTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
CDS-3UTR GCA 90 bp GGACAAAGGACAGACGGAACTGGAAGTCATCCCTCTGGGGCTCCCCTGAGACAACAGTCCCCCTGCGTCTaGAGGTGCTGTCTGTCTGGC +
Preference number: 4 (lower is better)
Translates to: GQRTDGTGSHPSGAPLRQQSPCV*RCCLSG
Trigger: GCCAGACAGACAGCACCTGCAGACGCAGGGGGACTG...TTGTCTCAGGGGAGCCCCAGAGGGATGACTTCCAGTTCCGTCTGTCCTTTGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
CDS-3UTR GCA 90 bp GCTTCACCTGCAGAGCCCAGCTCATCCAGCGAAGCTATGCTGGCCCAGAAGGAGGGGCGCTGGAGAGCGTaGTCTGGAAAGCAGTCACTT +
Preference number: 4 (lower is better)
Translates to: ASPAEPSSSSEAMLAQKEGRWRA*SGKQSL
Trigger: AAGTGACTGCTTTCCAGAGCACGCTCTCCAGCGCCC...CTCCTTCTGGGCCAGCATAGCTTCGCTGGATGAGCTGGGCTCTGCAGGTGAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568311.1
CDS-3UTR CCA 90 bp GCTGCTCCGAGTCTGGGATGCCGCCCACAATCTCCTGCGGTGTGTAGGCGTTTCGTGTGTAGGCGTTTCTaGCATGGGCGTTGGTGGTGT +
Preference number: 4 (lower is better)
Translates to: AAPSLGCRPQSPAVCRRFVCRRF*HGRWWC
Trigger: ACACCACCAACGCCCATGCCAGAAACGCCTACACAC...GAAACGCCTACACACCGCAGGAGATTGTGGGCGGCATCCCAGACTCGGAGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568613.5
CDS-3UTR CCA 90 bp TGGCCTGAGTCTGCGCAGGTGCTAGTGGGACCAGAGGCACTTCTTGGGAATGGAGAGCTGCTCCGAGTCTaGGATGCCGCCCACAATCTC +
Preference number: 4 (lower is better)
Translates to: WPESAQVLVGPEALLGNGELLRV*DAAHNL
Trigger: GAGATTGTGGGCGGCATCCCAGACTCGGAGCAGCTC...TCCATTCCCAAGAAGTGCCTCTGGTCCCACTAGCACCTGCGCAGACTCAGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
CDS-3UTR CCA 90 bp TTGTCCGACGTGAAGAAGACGAAGGTGTTGTCCGCGACGTGCAGGTCTTGGAGGAGACGGGTGCGTGCGTaGCGTCGACAGCCCAGTAGA +
Preference number: 4 (lower is better)
Translates to: LSDVKKTKVLSATCRSWRRRVRA*RRQPSR
Trigger: TCTACTGGGCTGTCGACGCCACGCACGCACCCGTCT...CCTCCAAGACCTGCACGTCGCGGACAACACCTTCGTCTTCTTCACGTCGGACAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
CDS-3UTR CCA 90 bp CTGGGCAGGTGGAATTGTGCAGTCCCCCTGCGTCTGCAGGTGCTGTCTGTCTGGGCGACGTGCAGGTCTTaGAGGAGCTCCAGTATCTTC +
Preference number: 4 (lower is better)
Translates to: LGRWNCAVPLRLQVLSVWATCRS*RSSSIF
Trigger: GAAGATACTGGAGCTCCTCCAAGACCTGCACGTCGC...CCAGACAGACAGCACCTGCAGACGCAGGGGGACTGCACAATTCCACCTGCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
CDS-3UTR CCA 90 bp TGCCAACCATCTCCCAGTCCCTGTACACAGGGATGTTGGGCCTGGCCTTGTTGTAGCTGGTGGCTCACCTaGCCTGCAGTGACGTGCCCT +
Preference number: 4 (lower is better)
Translates to: CQPSPSPCTQGCWAWPCCSWWLT*PAVTCP
Trigger: AGGGCACGTCACTGCAGGCCAGGTGAGCCACCAGCT...ACAACAAGGCCAGGCCCAACATCCCTGTGTACAGGGACTGGGAGATGGTTGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568613.5
CDS-3UTR CCA 90 bp AGGCAAACTGTATCCCCAGCCACCTCAGGCACCTGTTGTCAGGACCTCCTGAGGATGATGCTGCCCAGCTaGTGGCTCACCTGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: RQTVSPATSGTCCQDLLRMMLPS*WLTWPA
Trigger: TGCAGGCCAGGTGAGCCACCAGCTGGGCAGCATCAT...CCTCAGGAGGTCCTGACAACAGGTGCCTGAGGTGGCTGGGGATACAGTTTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
CDS-3UTR CCA 90 bp GGTGCTAGTGGGACCAGAGGCACTTCTTGGGAATGGATTCTGGAGGTGTCAGACGGGACCAAGGCCTCCTaGTGCTGCTGGACGACCGAG +
Preference number: 4 (lower is better)
Translates to: GASGTRGTSWEWILEVSDGTKAS*CCWTTE
Trigger: CTCGGTCGTCCAGCAGCACCAGGAGGCCTTGGTCCC...GTCTGACACCTCCAGAATCCATTCCCAAGAAGTGCCTCTGGTCCCACTAGCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
CDS-3UTR CCA 90 bp GGACAAAGGACAGACGGAACTGGAAGTCATCCCTCTGGGGCTCCCCTGAGACAACAGGTGCTGTCTGTCTaGCTTGGGCAGGGTTGGGGG +
Preference number: 4 (lower is better)
Translates to: GQRTDGTGSHPSGAPLRQQVLSV*LGQGWG
Trigger: CCCCCAACCCTGCCCAAGCCAGACAGACAGCACCTG...TTGTCTCAGGGGAGCCCCAGAGGGATGACTTCCAGTTCCGTCTGTCCTTTGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
CDS-3UTR CCA 90 bp CATCAGCGTGTCGCCACGGTAATAGAAGATAGGCCTGTCCATCAGCCGGCCCTGCAGGTCCTGGGCAGGTaGAATTGTGCAGTCCCCCTG +
Preference number: 4 (lower is better)
Translates to: HQRVATVIEDRPVHQPALQVLGR*NCAVPL
Trigger: CAGGGGGACTGCACAATTCCACCTGCCCAGGACCTG...CAGGGCCGGCTGATGGACAGGCCTATCTTCTATTACCGTGGCGACACGCTGATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567525.5
CDS-3UTR TCA 90 bp GTATCCCCAGCCACCTCAGGCACCTGTTGTCAGGACCTCCTGAGGCTGTCACAGTGCCGACAATCTTGCTaGCGTAGCCGGCCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: VSPATSGTCCQDLLRLSQCRQSC*RSRPSS
Trigger: TGAAGAAGGCCGGCTACGTCAGCAAGATTGTCGGCA...CTGTGACAGCCTCAGGAGGTCCTGACAACAGGTGCCTGAGGTGGCTGGGGATAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
CDS-3UTR TCA 90 bp CCAGAGCCATCCTTCCTCCAGGCACTTGCAGGGCCAACCGGAGATTCTAGGCCTCGCCGTTGTCCGACGTaGAGAAGACGAAGGTGTTGT +
Preference number: 4 (lower is better)
Translates to: PEPSFLQALAGPTGDSRPRRCPT*RRRRCC
Trigger: ACAACACCTTCGTCTTCTTCACGTCGGACAACGGCG...AGGCCTAGAATCTCCGGTTGGCCCTGCAAGTGCCTGGAGGAAGGATGGCTCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268695.10
ENST00000567525.5
ENST00000568613.5
CDS-3UTR TCA 90 bp GTGGAAGATCAGGGGCAGCTTCGTGTGGTCTTCCAGATTGTGAGTTGTGACCCCGGGTGGGGAGGAGGTTaGGGCCATCAATGGCCCTGT +
Preference number: 4 (lower is better)
Translates to: VEDQGQLRVVFQIVSCDPGWGGG*GHQWPC
Trigger: ACAGGGCCATTGATGGCCTCAACCTCCTCCCCACCC...GGGGTCACAACTCACAATCTGGAAGACCACACGAAGCTGCCCCTGATCTTCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
CDS-3UTR TCA 90 bp CCGGACGGCGTCTCCATACCGCCCTCGCTGACTGGTGCCCAAGAAGGGTTTGGATGGTCTTCCAGATTGTaGGTTGTGACCCCTGAAACG +
Preference number: 4 (lower is better)
Translates to: PDGVSIPPSLTGAQEGFGWSSRL*VVTPET
Trigger: CGTTTCAGGGGTCACAACTCACAATCTGGAAGACCA...TCCAAACCCTTCTTGGGCACCAGTCAGCGAGGGCGGTATGGAGACGCCGTCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
CDS-3UTR TCA 90 bp TGGATTCTGGAGGTGTCAGACACTTCCCTAACTTTTCACAGCCCGGAGGTGCCCGGGTTCACAAAGGCGTaGGACGGCAGGGTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: WILEVSDTSLTFHSPEVPGFTKA*DGRVLR
Trigger: CCTCAGGACCCTGCCGTCTCACGCCTTTGTGAACCC...GGGCACCTCCGGGCTGTGAAAAGTTAGGGAAGTGTCTGACACCTCCAGAATCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567525.5
CDS-3UTR TCA 90 bp CGACACCGACGGCCCAAAACTGTCTGGTACTCGGTGTCGTCCCAGTCCTCACACGACCTTAGGGACACCTaGCCTTCGCTCAGCATTCTC +
Preference number: 4 (lower is better)
Translates to: RHRRPKTVWYSVSSQSSHDLRDT*PSLSIL
Trigger: GAGAATGCTGAGCGAAGGTCAGGTGTCCCTAAGGTC...GTGTGAGGACTGGGACGACACCGAGTACCAGACAGTTTTGGGCCGTCGGTGTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569433.1
CDS-3UTR GCA 90 bp TTGTCCGACGTGAAGAAGACGAAGGTGTTGTCCGCGACGTGCAGGTCTTGGAGGAAGGCCTCCTGGTGCTaGTGGACGACCGAGGTGATC +
Preference number: 4 (lower is better)
Translates to: LSDVKKTKVLSATCRSWRKASWC*WTTEVI
Trigger: GATCACCTCGGTCGTCCAGCAGCACCAGGAGGCCTT...CCTCCAAGACCTGCACGTCGCGGACAACACCTTCGTCTTCTTCACGTCGGACAA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
CDS-3UTR GCA 90 bp GCGCAGGTGCTAGTGGGACCAGAGGCACTTCTTGGGAATGGATTCTGGAGGTGTGGGCAGGTGGAATTGTaGAGTCCCCCTGCGTCTGCA +
Preference number: 4 (lower is better)
Translates to: AQVLVGPEALLGNGFWRCGQVEL*SPPASA
Trigger: TGCAGACGCAGGGGGACTGCACAATTCCACCTGCCC...ACACCTCCAGAATCCATTCCCAAGAAGTGCCTCTGGTCCCACTAGCACCTGCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567525.5
CDS-3UTR GCA 90 bp GCAGAGCCCAGCTCATCCAGCGAAGCTATGCTGGCCCAGAAGGAGTTACACAATGAAAGGCCCGGCTACTaGTGTCAGGACACGGACCCC +
Preference number: 4 (lower is better)
Translates to: AEPSSSSEAMLAQKELHNERPGY*CQDTDP
Trigger: GGGGTCCGTGTCCTGACAGCAGTAGCCGGGCCTTTC...ATTGTGTAACTCCTTCTGGGCCAGCATAGCTTCGCTGGATGAGCTGGGCTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568311.1
CDS-3UTR GCA 90 bp CACCTGCAGAGCCCAGCTCATCCAGCGAAGCTATGCTGGCCCAGAAGGAGTTACGGAGATGCCACTCAGTaGAGAGAAAGGCCCGGCTAC +
Preference number: 4 (lower is better)
Translates to: HLQSPAHPAKLCWPRRSYGDATQ*RERPGY
Trigger: GTAGCCGGGCCTTTCTCTGCACTGAGTGGCATCTCC...GTAACTCCTTCTGGGCCAGCATAGCTTCGCTGGATGAGCTGGGCTCTGCAGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568311.1
CDS-3UTR CCA 90 bp CTCCCTAAGATGTATAAAGGCAAACTGTATCCCCAGCCACCTCAGGCACCTGTTCGACAACCGCCGCCATaGCAACCACGGGAGCCGCGG +
Preference number: 4 (lower is better)
Translates to: LPKMYKGKLYPQPPQAPVRQPPP*QPREPR
Trigger: CCGCGGCTCCCGTGGTTGCCATGGCGGCGGTTGTCG...AACAGGTGCCTGAGGTGGCTGGGGATACAGTTTGCCTTTATACATCTTAGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268695.10
CDS-3UTR CCA 90 bp CCAGAGCCATCCTTCCTCCAGGCACTTGCAGGGCCAACCGGAGATTCTAGGCCTAATTCGGGGTCTCTCTaGAGGGCTCTCCATACACCC +
Preference number: 4 (lower is better)
Translates to: PEPSFLQALAGPTGDSRPNSGSL*RALHTP
Trigger: GGGTGTATGGAGAGCCCTCCAGAGAGACCCCGAATT...AGGCCTAGAATCTCCGGTTGGCCCTGCAAGTGCCTGGAGGAAGGATGGCTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000568613.5
CDS-3UTR CCA 90 bp CCATCCTTCCTCCAGGCACTTGCAGGGCCAACCGGAGATTCTAGGCCTGGCCTGTTCTGGCATGGGCGTTaGTGGTGTAGAAGCCATTGC +
Preference number: 4 (lower is better)
Translates to: PSFLQALAGPTGDSRPGLFWHGR*WCRSHC
Trigger: GCAATGGCTTCTACACCACCAACGCCCATGCCAGAA...CAGGCCAGGCCTAGAATCTCCGGTTGGCCCTGCAAGTGCCTGGAGGAAGGATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268695.10
ENST00000567525.5
ENST00000568613.5
CDS-3UTR CCA 90 bp CAGGGTCAGGTCCTGGGCAGGTGGAATTGTGCAGTCCCCCTGCGTCTGCAGGTGGTCCAAAGTGGCAGTTaGGGGATCCAAACCACTCAT +
Preference number: 4 (lower is better)
Translates to: QGQVLGRWNCAVPLRLQVVQSGS*GIQTTH
Trigger: ATGAGTGGTTTGGATCCCCCAACTGCCACTTTGGAC...CACCTGCAGACGCAGGGGGACTGCACAATTCCACCTGCCCAGGACCTGACCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268695.10
CDS-3UTR CCA 90 bp AGCGTCCAGGGAAATTCCTTGTGGACAAAGGACAGACGGAACTGGAAGTCATCCCAATGGCCCTGTCGCTaGGCGGCGTCAGGCCCGCAA +
Preference number: 4 (lower is better)
Translates to: SVQGNSLWTKDRRNWKSSQWPCR*AASGPQ
Trigger: TTGCGGGCCTGACGCCGCCCAGCGACAGGGCCATTG...GGATGACTTCCAGTTCCGTCTGTCCTTTGTCCACAAGGAATTTCCCTGGACGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
CDS-3UTR CCA 90 bp CCGGACGGCGTCTCCATACCGCCCTCGCTGACTGGTGCCCAAGAAGGGTTTGGACTTGGGAATGGATTCTaGAGGTGTCAGACACTTCCC +
Preference number: 4 (lower is better)
Translates to: PDGVSIPPSLTGAQEGFGLGNGF*RCQTLP
Trigger: GGGAAGTGTCTGACACCTCCAGAATCCATTCCCAAG...TCCAAACCCTTCTTGGGCACCAGTCAGCGAGGGCGGTATGGAGACGCCGTCCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
CDS-3UTR CCA 90 bp GGTGCCCAAGAAGGGTTTGGAGGCATAGACGGGTGCGTGCGTGGCGTCGACAGCGGCACTTCTTGGGAATaGATTCTGGAGGTGTCAGAC +
Preference number: 4 (lower is better)
Translates to: GAQEGFGGIDGCVRGVDSGTSWE*ILEVSD
Trigger: GTCTGACACCTCCAGAATCCATTCCCAAGAAGTGCC...GCTGTCGACGCCACGCACGCACCCGTCTATGCCTCCAAACCCTTCTTGGGCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
CDS-3UTR CCA 90 bp GGTGCTAGTGGGACCAGAGGCACTTCTTGGGAATGGATTCTGGAGGTGTCAGACCAGGTGCTGTCTGTCTaGCTTGGGCAGGGTTGGGGG +
Preference number: 4 (lower is better)
Translates to: GASGTRGTSWEWILEVSDQVLSV*LGQGWG
Trigger: CCCCCAACCCTGCCCAAGCCAGACAGACAGCACCTG...GTCTGACACCTCCAGAATCCATTCCCAAGAAGTGCCTCTGGTCCCACTAGCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567525.5
CDS-3UTR CCA 90 bp GGACAAAGGACAGACGGAACTGGAAGTCATCCCTCTGGGGCTCCCCTGAGACAAGCCAGGGTCAGGTCCTaGGCAGGTGGAATTGTGCAG +
Preference number: 4 (lower is better)
Translates to: GQRTDGTGSHPSGAPLRQARVRS*AGGIVQ
Trigger: CTGCACAATTCCACCTGCCCAGGACCTGACCCTGGC...TTGTCTCAGGGGAGCCCCAGAGGGATGACTTCCAGTTCCGTCTGTCCTTTGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
CDS-3UTR TCA 90 bp GTCCTGGGCAGGTGGAATTGTGCAGTCCCCCTGCGTCTGCAGGTGCTGTCTGTCTGGTCTTCCAGATTGTaGGTTGTGACCCCTGAAACG +
Preference number: 4 (lower is better)
Translates to: VLGRWNCAVPLRLQVLSVWSSRL*VVTPET
Trigger: CGTTTCAGGGGTCACAACTCACAATCTGGAAGACCA...GACAGACAGCACCTGCAGACGCAGGGGGACTGCACAATTCCACCTGCCCAGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
CDS-3UTR GCA 90 bp CGGCGTCTCCATACCGCCCTCGCTGACTGGTGCCCAAGAAGGGTTTGGAGGCATGAAAAGCAGCCCTTCTaGAGCCATCCGGTCCAAATT +
Preference number: 4 (lower is better)
Translates to: RRLHTALADWCPRRVWRHEKQPF*SHPVQI
Trigger: AATTTGGACCGGATGGCTGCAGAAGGGCTGCTTTTC...ATGCCTCCAAACCCTTCTTGGGCACCAGTCAGCGAGGGCGGTATGGAGACGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568613.5
CDS-3UTR GCA 90 bp GTATCCCCAGCCACCTCAGGCACCTGTTGTCAGGACCTCCTGAGGCTGTCACAGCACTCATCAAATCCGTaGTTCAGGGGGTGGAACTGG +
Preference number: 4 (lower is better)
Translates to: VSPATSGTCCQDLLRLSQHSSNP*FRGWNW
Trigger: CCAGTTCCACCCCCTGAAGCACGGATTTGATGAGTG...CTGTGACAGCCTCAGGAGGTCCTGACAACAGGTGCCTGAGGTGGCTGGGGATAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268695.10
CDS-3UTR GCA 90 bp GGGGAGGACCGAGGCCAGAGCCATCCTTCCTCCAGGCACTTGCAGGGCCAACCGATTCTTCATAATATCTaGCAACCATCTCCCAGTCCC +
Preference number: 4 (lower is better)
Translates to: GEDRGQSHPSSRHLQGQPILHNI*QPSPSP
Trigger: GGGACTGGGAGATGGTTGGCAGATATTATGAAGAAT...CGGTTGGCCCTGCAAGTGCCTGGAGGAAGGATGGCTCTGGCCTCGGTCCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000568613.5
CDS-3UTR GCA 90 bp GAATTGTGCAGTCCCCCTGCGTCTGCAGGTGCTGTCTGTCTGGCTTGGGCAGGGAAAGGGGTGGTGCCGTaGCTGTCTCTTAATGAAGTC +
Preference number: 4 (lower is better)
Translates to: ELCSPPASAGAVCLAWAGKGVVP*LSLNEV
Trigger: GACTTCATTAAGAGACAGGCACGGCACCACCCCTTT...CCCTGCCCAAGCCAGACAGACAGCACCTGCAGACGCAGGGGGACTGCACAATTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
CDS-3UTR GCA 90 bp GTCCTGGGCAGGTGGAATTGTGCAGTCCCCCTGCGTCTGCAGGTGCTGTCTGTCAGGAAAAAGGGGTGGTaGCGTGCCTGTCTCTTAATG +
Preference number: 4 (lower is better)
Translates to: VLGRWNCAVPLRLQVLSVRKKGW*RACLLM
Trigger: CATTAAGAGACAGGCACGGCACCACCCCTTTTTCCT...GACAGACAGCACCTGCAGACGCAGGGGGACTGCACAATTCCACCTGCCCAGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
CDS-3UTR GCA 90 bp GAAGACGAAGGTGTTGTCCGCGACGTGCAGGTCTTGGAGGAGCTCCAGTATCTTACAGAAAGGGGCCGTTaGTGCCACCTTGTTCGGGGG +
Preference number: 4 (lower is better)
Translates to: EDEGVVRDVQVLEELQYLTERGR*CHLVRG
Trigger: CCCCCGAACAAGGTGGCAGCAACGGCCCCTTTCTGT...AAGATACTGGAGCTCCTCCAAGACCTGCACGTCGCGGACAACACCTTCGTCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
CDS-3UTR GCA 90 bp CAGGGAAATTCCTTGTGGACAAAGGACAGACGGAACTGGAAGTCATCCCTCTGGTGGCCTGCAGTGACGTaGCCTGGCCACCATGCGAGG +
Preference number: 4 (lower is better)
Translates to: QGNSLWTKDRRNWKSSLWWPAVT*PGHHAR
Trigger: CCTCGCATGGTGGCCAGGGCACGTCACTGCAGGCCA...CCAGAGGGATGACTTCCAGTTCCGTCTGTCCTTTGTCCACAAGGAATTTCCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
CDS-3UTR GCA 90 bp GTCCTGGGCAGGTGGAATTGTGCAGTCCCCCTGCGTCTGCAGGTGCTGTCTGTCACCCCTGAAACGTTCTaGCCAGGGCAGAAATCAATG +
Preference number: 4 (lower is better)
Translates to: VLGRWNCAVPLRLQVLSVTPETF*PGQKSM
Trigger: CATTGATTTCTGCCCTGGGCAGAACGTTTCAGGGGT...GACAGACAGCACCTGCAGACGCAGGGGGACTGCACAATTCCACCTGCCCAGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
CDS-3UTR GCA 90 bp GCAGGTGCTAGTGGGACCAGAGGCACTTCTTGGGAATGGATTCTGGAGGTGTCATTCACAGCCCGGAGGTaGCCAGTTCATGACCGCCCA +
Preference number: 4 (lower is better)
Translates to: AGASGTRGTSWEWILEVSFTARR*PVHDRP
Trigger: TGGGCGGTCATGAACTGGGCACCTCCGGGCTGTGAA...TGACACCTCCAGAATCCATTCCCAAGAAGTGCCTCTGGTCCCACTAGCACCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
CDS-3UTR GCA 90 bp TTGTCCGACGTGAAGAAGACGAAGGTGTTGTCCGCGACGTGCAGGTCTTGGAGGCTTCCTCCAGGCACTTaGAGGGCCAACCGGAGATTC +
Preference number: 4 (lower is better)
Translates to: LSDVKKTKVLSATCRSWRLPPGT*RANRRF
Trigger: GAATCTCCGGTTGGCCCTGCAAGTGCCTGGAGGAAG...CCTCCAAGACCTGCACGTCGCGGACAACACCTTCGTCTTCTTCACGTCGGACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
CDS-3UTR GCA 90 bp GTGGAAGATCAGGGGCAGCTTCGTGTGGTCTTCCAGATTGTGAGTTGTGACCCCCCTGACACCAGCATCTaGATGCTCGCAGGAGCTGGC +
Preference number: 4 (lower is better)
Translates to: VEDQGQLRVVFQIVSCDPPDTSI*MLAGAG
Trigger: GCCAGCTCCTGCGAGCATGCAGATGCTGGTGTCAGG...GGGGTCACAACTCACAATCTGGAAGACCACACGAAGCTGCCCCTGATCTTCCAC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000568613.5
CDS-3UTR CCA 90 bp CGGCGTCTCCATACCGCCCTCGCTGACTGGTGCCCAAGAAGGGTTTGGAGGCATGTCCAAAGTGGCAGTTaGGGGATCCAAACCACTCAT +
Preference number: 4 (lower is better)
Translates to: RRLHTALADWCPRRVWRHVQSGS*GIQTTH
Trigger: ATGAGTGGTTTGGATCCCCCAACTGCCACTTTGGAC...ATGCCTCCAAACCCTTCTTGGGCACCAGTCAGCGAGGGCGGTATGGAGACGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568613.5
CDS-3UTR CCA 90 bp CCATCCTTCCTCCAGGCACTTGCAGGGCCAACCGGAGATTCTAGGCCTGGCCTGTGTACACAGGGATGTTaGGCCTGGCCTTGTTGTCAT +
Preference number: 4 (lower is better)
Translates to: PSFLQALAGPTGDSRPGLCTQGC*AWPCCH
Trigger: ATGACAACAAGGCCAGGCCCAACATCCCTGTGTACA...CAGGCCAGGCCTAGAATCTCCGGTTGGCCCTGCAAGTGCCTGGAGGAAGGATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000568613.5
CDS-3UTR CCA 90 bp GTGGAAGATCAGGGGCAGCTTCGTGTGGTCTTCCAGATTGTGAGTTGTGACCCCACCGCCCTCGCTGACTaGTGCCCAAGAAGGGTTTGG +
Preference number: 4 (lower is better)
Translates to: VEDQGQLRVVFQIVSCDPTALAD*CPRRVW
Trigger: CCAAACCCTTCTTGGGCACCAGTCAGCGAGGGCGGT...GGGGTCACAACTCACAATCTGGAAGACCACACGAAGCTGCCCCTGATCTTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
CDS-3UTR CCA 90 bp AGCGTCCAGGGAAATTCCTTGTGGACAAAGGACAGACGGAACTGGAAGTCATCCTGCAGTGACGTGCCCTaGCCACCATGCGAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: SVQGNSLWTKDRRNWKSSCSDVP*PPCEGR
Trigger: CCTGCCCTCGCATGGTGGCCAGGGCACGTCACTGCA...GGATGACTTCCAGTTCCGTCTGTCCTTTGTCCACAAGGAATTTCCCTGGACGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
CDS-3UTR CCA 90 bp GCGTCCAGGGAAATTCCTTGTGGACAAAGGACAGACGGAACTGGAAGTCATCCCAGCTGGTGGCTCACCTaGCCTGCAGTGACGTGCCCT +
Preference number: 4 (lower is better)
Translates to: ASREIPCGQRTDGTGSHPSWWLT*PAVTCP
Trigger: AGGGCACGTCACTGCAGGCCAGGTGAGCCACCAGCT...GGGATGACTTCCAGTTCCGTCTGTCCTTTGTCCACAAGGAATTTCCCTGGACGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
CDS-3UTR CCA 90 bp GCTGCCACCTTGTTCGGGGGCGGAAATGAGGGCAGCGCCGTTGTCCGACGTGAACTGGTCTCAGATATTTaGGGTTCACAAAGGCGTGAG +
Preference number: 4 (lower is better)
Translates to: AATLFGGGNEGSAVVRRELVSDI*GSQRRE
Trigger: CTCACGCCTTTGTGAACCCCAAATATCTGAGACCAG...TTCACGTCGGACAACGGCGCTGCCCTCATTTCCGCCCCCGAACAAGGTGGCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567525.5
CDS-3UTR CCA 90 bp GTTGGTCCAGGTCCAGAAGTGAGCCTTGTGCTGCCCGAGGGTGGCCGCCATCAGCAGGGAAATTCCTTGTaGACAAAGGACAGACGGAAC +
Preference number: 4 (lower is better)
Translates to: VGPGPEVSLVLPEGGRHQQGNSL*TKDRRN
Trigger: GTTCCGTCTGTCCTTTGTCCACAAGGAATTTCCCTG...CTGATGGCGGCCACCCTCGGGCAGCACAAGGCTCACTTCTGGACCTGGACCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567525.5
CDS-3UTR CCA 90 bp CCTGCAGAGCCCAGCTCATCCAGCGAAGCTATGCTGGCCCAGAAGGAGTTACACCTGGAGAGCGTGCTCTaGAAAGCAGTCACTTCGCTC +
Preference number: 4 (lower is better)
Translates to: PAEPSSSSEAMLAQKELHLESVL*KAVTSL
Trigger: GAGCGAAGTGACTGCTTTCCAGAGCACGCTCTCCAG...GTGTAACTCCTTCTGGGCCAGCATAGCTTCGCTGGATGAGCTGGGCTCTGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568311.1
CDS-3UTR CCA 90 bp GGAGGCTTCACCTGCAGAGCCCAGCTCATCCAGCGAAGCTATGCTGGCCCAGAACCAGCGAAGCTATGCTaGCCCAGAAGGAGTTACACA +
Preference number: 4 (lower is better)
Translates to: GGFTCRAQLIQRSYAGPEPAKLC*PRRSYT
Trigger: TGTGTAACTCCTTCTGGGCCAGCATAGCTTCGCTGG...TTCTGGGCCAGCATAGCTTCGCTGGATGAGCTGGGCTCTGCAGGTGAAGCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568311.1
CDS-3UTR TCA 90 bp GGACAAAGGACAGACGGAACTGGAAGTCATCCCTCTGGGGCTCCCCTGAGACAAATCCCATGTCGTCCATaGGCAGGAGCAGGATGTTGG +
Preference number: 4 (lower is better)
Translates to: GQRTDGTGSHPSGAPLRQIPCRP*AGAGCW
Trigger: CCAACATCCTGCTCCTGCTCATGGACGACATGGGAT...TTGTCTCAGGGGAGCCCCAGAGGGATGACTTCCAGTTCCGTCTGTCCTTTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268695.10
CDS-3UTR TCA 90 bp ACCTGCAGAGCCCAGCTCATCCAGCGAAGCTATGCTGGCCCAGAAGGAGTTACAGTGATTCGTCGTCCATaGGCAGGAGCAGGATGTTGG +
Preference number: 4 (lower is better)
Translates to: TCRAQLIQRSYAGPEGVTVIRRP*AGAGCW
Trigger: CCAACATCCTGCTCCTGCTCATGGACGACGAATCAC...TGTAACTCCTTCTGGGCCAGCATAGCTTCGCTGGATGAGCTGGGCTCTGCAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568311.1
CDS-3UTR GCA 90 bp GCGTCCAGGGAAATTCCTTGTGGACAAAGGACAGACGGAACTGGAAGTCATCCCGTGTTGTCCGCGACGTaGAGGTCTTGGAGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: ASREIPCGQRTDGTGSHPVLSAT*RSWRSS
Trigger: GGAGCTCCTCCAAGACCTGCACGTCGCGGACAACAC...GGGATGACTTCCAGTTCCGTCTGTCCTTTGTCCACAAGGAATTTCCCTGGACGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
CDS-3UTR GCA 90 bp AAGATGTATAAAGGCAAACTGTATCCCCAGCCACCTCAGGCACCTGTTGTCAGGGTGGCTCACCTGGCCTaGAGTGACGTGCCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: KMYKGKLYPQPPQAPVVRVAHLA*SDVPWP
Trigger: TGGCCAGGGCACGTCACTGCAGGCCAGGTGAGCCAC...CCTGACAACAGGTGCCTGAGGTGGCTGGGGATACAGTTTGCCTTTATACATCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
CDS-3UTR GCA 90 bp CGAGTCTGGGATGCCGCCCACAATCTCCTGCGGTGTGTAGGCGTTTCTGGCATGACCCCTGAAACGTTCTaGCCAGGGCAGAAATCAATG +
Preference number: 4 (lower is better)
Translates to: RVWDAAHNLLRCVGVSGMTPETF*PGQKSM
Trigger: CATTGATTTCTGCCCTGGGCAGAACGTTTCAGGGGT...CATGCCAGAAACGCCTACACACCGCAGGAGATTGTGGGCGGCATCCCAGACTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568613.5
CDS-3UTR GCA 90 bp GCGTCCAGGGAAATTCCTTGTGGACAAAGGACAGACGGAACTGGAAGTCATCCCGGGCAGGTGGAATTGTaGAGTCCCCCTGCGTCTGCA +
Preference number: 4 (lower is better)
Translates to: ASREIPCGQRTDGTGSHPGQVEL*SPPASA
Trigger: TGCAGACGCAGGGGGACTGCACAATTCCACCTGCCC...GGGATGACTTCCAGTTCCGTCTGTCCTTTGTCCACAAGGAATTTCCCTGGACGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
CDS-3UTR CCA 90 bp ATTGTGCAGTCCCCCTGCGTCTGCAGGTGCTGTCTGTCTGGCTTGGGCAGGGTTGCGAGCACAGAGGGTTaGCAGAATAGAAGTTTGGGA +
Preference number: 4 (lower is better)
Translates to: IVQSPCVCRCCLSGLGRVASTEG*QNRSLG
Trigger: TCCCAAACTTCTATTCTGCCAACCCTCTGTGCTCGC...AACCCTGCCCAAGCCAGACAGACAGCACCTGCAGACGCAGGGGGACTGCACAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000268695.10
CDS-3UTR CCA 90 bp AGCGTCCAGGGAAATTCCTTGTGGACAAAGGACAGACGGAACTGGAAGTCATCCGGGTCCCGTCCCAGGTaGAAGATCAGGGGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: SVQGNSLWTKDRRNWKSSGSRPR*KIRGSF
Trigger: GAAGCTGCCCCTGATCTTCCACCTGGGACGGGACCC...GGATGACTTCCAGTTCCGTCTGTCCTTTGTCCACAAGGAATTTCCCTGGACGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
CDS-3UTR CCA 90 bp AGCGTCCAGGGAAATTCCTTGTGGACAAAGGACAGACGGAACTGGAAGTCATCCTTGCACACGTTGAGCTaGGGCTGCGCGGGGACCAAG +
Preference number: 4 (lower is better)
Translates to: SVQGNSLWTKDRRNWKSSLHTLS*GCAGTK
Trigger: CTTGGTCCCCGCGCAGCCCCAGCTCAACGTGTGCAA...GGATGACTTCCAGTTCCGTCTGTCCTTTGTCCACAAGGAATTTCCCTGGACGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
CDS-3UTR CCA 90 bp GGCAGGTGGAATTGTGCAGTCCCCCTGCGTCTGCAGGTGCTGTCTGTCTGGCTTCTTGGGAATGGATTCTaGAGGTGTCAGACACTTCCC +
Preference number: 4 (lower is better)
Translates to: GRWNCAVPLRLQVLSVWLLGNGF*RCQTLP
Trigger: GGGAAGTGTCTGACACCTCCAGAATCCATTCCCAAG...AAGCCAGACAGACAGCACCTGCAGACGCAGGGGGACTGCACAATTCCACCTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
CDS-3UTR TCA 90 bp GTGGAAGATCAGGGGCAGCTTCGTGTGGTCTTCCAGATTGTGAGTTGTGACCCCCGCCGTTGTCCGACGTaGAGAAGACGAAGGTGTTGT +
Preference number: 4 (lower is better)
Translates to: VEDQGQLRVVFQIVSCDPRRCPT*RRRRCC
Trigger: ACAACACCTTCGTCTTCTTCACGTCGGACAACGGCG...GGGGTCACAACTCACAATCTGGAAGACCACACGAAGCTGCCCCTGATCTTCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
CDS-3UTR TCA 90 bp CTCCCTAAGATGTATAAAGGCAAACTGTATCCCCAGCCACCTCAGGCACCTGTTGGGTGGGGAGGAGGTTaGGGCCATCAATGGCCCTGT +
Preference number: 4 (lower is better)
Translates to: LPKMYKGKLYPQPPQAPVGWGGG*GHQWPC
Trigger: ACAGGGCCATTGATGGCCTCAACCTCCTCCCCACCC...AACAGGTGCCTGAGGTGGCTGGGGATACAGTTTGCCTTTATACATCTTAGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
CDS-3UTR TCA 90 bp GCGTCCAGGGAAATTCCTTGTGGACAAAGGACAGACGGAACTGGAAGTCATCCCATTCTAGGCCTGGCCTaGGTCTGCGCAGGTGCTAGT +
Preference number: 4 (lower is better)
Translates to: ASREIPCGQRTDGTGSHPILGLA*VCAGAS
Trigger: ACTAGCACCTGCGCAGACTCAGGCCAGGCCTAGAAT...GGGATGACTTCCAGTTCCGTCTGTCCTTTGTCCACAAGGAATTTCCCTGGACGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
CDS-3UTR GCA 90 bp GCTGCCACCTTGTTCGGGGGCGGAAATGAGGGCAGCGCCGTTGTCCGACGTGAAATTCTTCATAATATCTaGCAACCATCTCCCAGTCCC +
Preference number: 4 (lower is better)
Translates to: AATLFGGGNEGSAVVRREILHNI*QPSPSP
Trigger: GGGACTGGGAGATGGTTGGCAGATATTATGAAGAAT...TTCACGTCGGACAACGGCGCTGCCCTCATTTCCGCCCCCGAACAAGGTGGCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568613.5
CDS-3UTR GCA 90 bp GCAAACTGTATCCCCAGCCACCTCAGGCACCTGTTGTCAGGACCTCCTGAGGCTAAAGGGGTGGTGCCGTaGCTGTCTCTTAATGAAGTC +
Preference number: 4 (lower is better)
Translates to: ANCIPSHLRHLLSGPPEAKGVVP*LSLNEV
Trigger: GACTTCATTAAGAGACAGGCACGGCACCACCCCTTT...AGCCTCAGGAGGTCCTGACAACAGGTGCCTGAGGTGGCTGGGGATACAGTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
CDS-3UTR GCA 90 bp GACGTGAAGAAGACGAAGGTGTTGTCCGCGACGTGCAGGTCTTGGAGGAGCTCCAGGAAAAAGGGGTGGTaGCGTGCCTGTCTCTTAATG +
Preference number: 4 (lower is better)
Translates to: DVKKTKVLSATCRSWRSSRKKGW*RACLLM
Trigger: CATTAAGAGACAGGCACGGCACCACCCCTTTTTCCT...GGAGCTCCTCCAAGACCTGCACGTCGCGGACAACACCTTCGTCTTCTTCACGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
CDS-3UTR CCA 90 bp GGTGCTAGTGGGACCAGAGGCACTTCTTGGGAATGGATTCTGGAGGTGTCAGACAATTCGGGGTCTCTCTaGAGGGCTCTCCATACACCC +
Preference number: 4 (lower is better)
Translates to: GASGTRGTSWEWILEVSDNSGSL*RALHTP
Trigger: GGGTGTATGGAGAGCCCTCCAGAGAGACCCCGAATT...GTCTGACACCTCCAGAATCCATTCCCAAGAAGTGCCTCTGGTCCCACTAGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568613.5
CDS-3UTR CCA 90 bp TTCTTGGGAATGGATTCTGGAGGTGTCAGACACTTCCCTAACTTTTCACAGCCCTGCAGTGACGTGCCCTaGCCACCATGCGAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: FLGMDSGGVRHFPNFSQPCSDVP*PPCEGR
Trigger: CCTGCCCTCGCATGGTGGCCAGGGCACGTCACTGCA...GGGCTGTGAAAAGTTAGGGAAGTGTCTGACACCTCCAGAATCCATTCCCAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
CDS-3UTR CCA 90 bp AAGATGTATAAAGGCAAACTGTATCCCCAGCCACCTCAGGCACCTGTTGTCAGGCTGCTGAGGGCCTCCTaGTACTCGGCGCTGGCAAAG +
Preference number: 4 (lower is better)
Translates to: KMYKGKLYPQPPQAPVVRLLRAS*YSALAK
Trigger: CTTTGCCAGCGCCGAGTACCAGGAGGCCCTCAGCAG...CCTGACAACAGGTGCCTGAGGTGGCTGGGGATACAGTTTGCCTTTATACATCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
CDS-3UTR CCA 90 bp CATCAGCGTGTCGCCACGGTAATAGAAGATAGGCCTGTCCATCAGCCGGCCCTGGGCACTTCTTGGGAATaGATTCTGGAGGTGTCAGAC +
Preference number: 4 (lower is better)
Translates to: HQRVATVIEDRPVHQPALGTSWE*ILEVSD
Trigger: GTCTGACACCTCCAGAATCCATTCCCAAGAAGTGCC...CAGGGCCGGCTGATGGACAGGCCTATCTTCTATTACCGTGGCGACACGCTGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
CDS-3UTR CCA 90 bp GTTGTCCGACGTGAAGAAGACGAAGGTGTTGTCCGCGACGTGCAGGTCTTGGAGGCCTCCACTTCTGCTTaGTCTTCAGGTGGGGAATGT +
Preference number: 4 (lower is better)
Translates to: VVRREEDEGVVRDVQVLEASTSA*SSGGEC
Trigger: ACATTCCCCACCTGAAGACCAAGCAGAAGTGGAGGC...CTCCAAGACCTGCACGTCGCGGACAACACCTTCGTCTTCTTCACGTCGGACAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568613.5
CDS-3UTR TCA 90 bp AAGATGTATAAAGGCAAACTGTATCCCCAGCCACCTCAGGCACCTGTTGTCAGGGCAGGTAGATCTGGGTaGGGTTGGCTTCCCCCGTCT +
Preference number: 4 (lower is better)
Translates to: KMYKGKLYPQPPQAPVVRAGRSG*GWLPPS
Trigger: AGACGGGGGAAGCCAACCTCACCCAGATCTACCTGC...CCTGACAACAGGTGCCTGAGGTGGCTGGGGATACAGTTTGCCTTTATACATCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
CDS-3UTR TCA 90 bp ATTGCCCCGTTCCCTTACTGTTTACATAAAAATGCGGATTCACTGGGCCAGACTTCACCTGGCCTGCAGTaGCGTGCCCTGGCCACCATG +
Preference number: 4 (lower is better)
Translates to: IAPFPYCLHKNADSLGQTSPGLQ*RALATM
Trigger: CATGGTGGCCAGGGCACGTCACTGCAGGCCAGGTGA...AGTCTGGCCCAGTGAATCCGCATTTTTATGTAAACAGTAAGGGAACGGGGCAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
CDS-3UTR TCA 90 bp GGACAAAGGACAGACGGAACTGGAAGTCATCCCTCTGGGGCTCCCCTGAGACAAAATCAATGCCCTGTCTaGAGTTCTCCCAGGAGTTGG +
Preference number: 4 (lower is better)
Translates to: GQRTDGTGSHPSGAPLRQNQCPV*SSPRSW
Trigger: CCAACTCCTGGGAGAACTTCAGACAGGGCATTGATT...TTGTCTCAGGGGAGCCCCAGAGGGATGACTTCCAGTTCCGTCTGTCCTTTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
CDS-3UTR TCA 90 bp TGCCAACCATCTCCCAGTCCCTGTACACAGGGATGTTGGGCCTGGCCTTGTTGTTGGTCTTCCAGATTGTaGGTTGTGACCCCTGAAACG +
Preference number: 4 (lower is better)
Translates to: CQPSPSPCTQGCWAWPCCWSSRL*VVTPET
Trigger: CGTTTCAGGGGTCACAACTCACAATCTGGAAGACCA...ACAACAAGGCCAGGCCCAACATCCCTGTGTACAGGGACTGGGAGATGGTTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568613.5
CDS-3UTR GCA 90 bp CGCCCTCGATGGCGAGCACAGAGGGTTGGCAGAATAGAAGTTTGGGAAAAGCAGCACTCATCAAATCCGTaGTTCAGGGGGTGGAACTGG +
Preference number: 4 (lower is better)
Translates to: RPRWRAQRVGRIEVWEKQHSSNP*FRGWNW
Trigger: CCAGTTCCACCCCCTGAAGCACGGATTTGATGAGTG...CTGCTTTTCCCAAACTTCTATTCTGCCAACCCTCTGTGCTCGCCATCGAGGGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568613.5
CDS-3UTR GCA 90 bp GTTGGGGGATCCAAACCACTCATCAAATCCGTGCTTCAGGGGGTGGAACTGGGGAAAGGGGTGGTGCCGTaGCTGTCTCTTAATGAAGTC +
Preference number: 4 (lower is better)
Translates to: VGGSKPLIKSVLQGVELGKGVVP*LSLNEV
Trigger: GACTTCATTAAGAGACAGGCACGGCACCACCCCTTT...CCCCAGTTCCACCCCCTGAAGCACGGATTTGATGAGTGGTTTGGATCCCCCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000568613.5
CDS-3UTR GCA 90 bp AAGATGTATAAAGGCAAACTGTATCCCCAGCCACCTCAGGCACCTGTTGTCAGGAAGGCCTCCTGGTGCTaGTGGACGACCGAGGTGATC +
Preference number: 4 (lower is better)
Translates to: KMYKGKLYPQPPQAPVVRKASWC*WTTEVI
Trigger: GATCACCTCGGTCGTCCAGCAGCACCAGGAGGCCTT...CCTGACAACAGGTGCCTGAGGTGGCTGGGGATACAGTTTGCCTTTATACATCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
CDS-3UTR GCA 90 bp TTTGGGAAAAGCAGCCCTTCTGCAGCCATCCGGTCCAAATTCGGGGTCTCTCTGTTTCGCCTCCACTTCTaGTTGGTCTTCAGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: FGKSSPSAAIRSKFGVSLFRLHF*LVFRWG
Trigger: TCCCCACCTGAAGACCAAGCAGAAGTGGAGGCGAAA...CAGAGAGACCCCGAATTTGGACCGGATGGCTGCAGAAGGGCTGCTTTTCCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000568613.5
CDS-3UTR CCA 90 bp ATAAAGGCAAACTGTATCCCCAGCCACCTCAGGCACCTGTTGTCAGGACCTCCTGTGTGTAGGCGTTTCTaGCATGGGCGTTGGTGGTGT +
Preference number: 4 (lower is better)
Translates to: IKANCIPSHLRHLLSGPPVCRRF*HGRWWC
Trigger: ACACCACCAACGCCCATGCCAGAAACGCCTACACAC...AGGAGGTCCTGACAACAGGTGCCTGAGGTGGCTGGGGATACAGTTTGCCTTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
CDS-3UTR CCA 90 bp AAGATGTATAAAGGCAAACTGTATCCCCAGCCACCTCAGGCACCTGTTGTCAGGGAGCTGCTCCGAGTCTaGGATGCCGCCCACAATCTC +
Preference number: 4 (lower is better)
Translates to: KMYKGKLYPQPPQAPVVRELLRV*DAAHNL
Trigger: GAGATTGTGGGCGGCATCCCAGACTCGGAGCAGCTC...CCTGACAACAGGTGCCTGAGGTGGCTGGGGATACAGTTTGCCTTTATACATCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
CDS-3UTR CCA 90 bp GAAGACGAAGGTGTTGTCCGCGACGTGCAGGTCTTGGAGGAGCTCCAGTATCTTCAGGGATGTTGGGCCTaGCCTTGTTGTCATAAGGTC +
Preference number: 4 (lower is better)
Translates to: EDEGVVRDVQVLEELQYLQGCWA*PCCHKV
Trigger: GACCTTATGACAACAAGGCCAGGCCCAACATCCCTG...AAGATACTGGAGCTCCTCCAAGACCTGCACGTCGCGGACAACACCTTCGTCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568613.5
CDS-3UTR CCA 90 bp GTTGGGGGATCCAAACCACTCATCAAATCCGTGCTTCAGGGGGTGGAACTGGGGTCCCTCCTTCAAACGTaGTCTGCTTCCCACACAGAA +
Preference number: 4 (lower is better)
Translates to: VGGSKPLIKSVLQGVELGSLLQT*SASHTE
Trigger: TTCTGTGTGGGAAGCAGACCACGTTTGAAGGAGGGA...CCCCAGTTCCACCCCCTGAAGCACGGATTTGATGAGTGGTTTGGATCCCCCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000568613.5
CDS-3UTR CCA 90 bp TTCTTGGGAATGGATTCTGGAGGTGTCAGACACTTCCCTAACTTTTCACAGCCCGCTGTCTGTCTGGCTTaGGCAGGGTTGGGGGAGGAC +
Preference number: 4 (lower is better)
Translates to: FLGMDSGGVRHFPNFSQPAVCLA*AGLGED
Trigger: GTCCTCCCCCAACCCTGCCCAAGCCAGACAGACAGC...GGGCTGTGAAAAGTTAGGGAAGTGTCTGACACCTCCAGAATCCATTCCCAAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
CDS-3UTR CCA 90 bp TCCAGCGAAGCTATGCTGGCCCAGAAGGAGTTACACAATGAAAAGAAGAAATTCCAGGACACGGACCCCTaGGCGCTGGAGAGCGTGCTC +
Preference number: 4 (lower is better)
Translates to: SSEAMLAQKELHNEKKKFQDTDP*ALESVL
Trigger: GAGCACGCTCTCCAGCGCCCAGGGGTCCGTGTCCTG...GAATTTCTTCTTTTCATTGTGTAACTCCTTCTGGGCCAGCATAGCTTCGCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568311.1
CDS-3UTR TCA 90 bp ATTAGCGTCCAGGGAAATTCCTTGTGGACAAAGGACAGACGGAACTGGAAGTCAGCAGGTAGATCTGGGTaGGGTTGGCTTCCCCCGTCT +
Preference number: 4 (lower is better)
Translates to: ISVQGNSLWTKDRRNWKSAGRSG*GWLPPS
Trigger: AGACGGGGGAAGCCAACCTCACCCAGATCTACCTGC...TGACTTCCAGTTCCGTCTGTCCTTTGTCCACAAGGAATTTCCCTGGACGCTAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
CDS-3UTR TCA 90 bp CCGTTCCCTTACTGTTTACATAAAAATGCGGATTCACTGGGCCAGACTCAATCGGTCCAGGTCCAGAAGTaGGCCTTGTGCTGCCCGAGG +
Preference number: 4 (lower is better)
Translates to: PFPYCLHKNADSLGQTQSVQVQK*ALCCPR
Trigger: CCTCGGGCAGCACAAGGCTCACTTCTGGACCTGGAC...CGATTGAGTCTGGCCCAGTGAATCCGCATTTTTATGTAAACAGTAAGGGAACGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
CDS-3UTR TCA 90 bp AAGATGTATAAAGGCAAACTGTATCCCCAGCCACCTCAGGCACCTGTTGTCAGGGTGAGTTGTGACCCCTaGAACGTTCTGCCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: KMYKGKLYPQPPQAPVVRVSCDP*NVLPRA
Trigger: TGCCCTGGGCAGAACGTTTCAGGGGTCACAACTCAC...CCTGACAACAGGTGCCTGAGGTGGCTGGGGATACAGTTTGCCTTTATACATCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
CDS-3UTR GCA 90 bp ATTGCCCCGTTCCCTTACTGTTTACATAAAAATGCGGATTCACTGGGCCAGACTCAGTCCCCCTGCGTCTaGAGGTGCTGTCTGTCTGGC +
Preference number: 4 (lower is better)
Translates to: IAPFPYCLHKNADSLGQTQSPCV*RCCLSG
Trigger: GCCAGACAGACAGCACCTGCAGACGCAGGGGGACTG...AGTCTGGCCCAGTGAATCCGCATTTTTATGTAAACAGTAAGGGAACGGGGCAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
CDS-3UTR GCA 90 bp GAATTGTGCAGTCCCCCTGCGTCTGCAGGTGCTGTCTGTCTGGCTTGGGCAGGGAAACGCTTATATGATTaGCCCGTTCCCTTACTGTTT +
Preference number: 4 (lower is better)
Translates to: ELCSPPASAGAVCLAWAGKRLYD*PVPLLF
Trigger: AAACAGTAAGGGAACGGGGCAATCATATAAGCGTTT...CCCTGCCCAAGCCAGACAGACAGCACCTGCAGACGCAGGGGGACTGCACAATTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
CDS-3UTR GCA 90 bp CTGCAGAGCCCAGCTCATCCAGCGAAGCTATGCTGGCCCAGAAGGAGTTACACATCTTTAGGAGGGAGATaGCACTCAGTGCAGAGAAAG +
Preference number: 4 (lower is better)
Translates to: LQSPAHPAKLCWPRRSYTSLGGR*HSVQRK
Trigger: CTTTCTCTGCACTGAGTGGCATCTCCCTCCTAAAGA...TGTGTAACTCCTTCTGGGCCAGCATAGCTTCGCTGGATGAGCTGGGCTCTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568311.1
CDS-3UTR CCA 90 bp CCTGTACACAGGGATGTTGGGCCTGGCCTTGTTGTCATAAGGTCCAAAGTGGCATTCTGGCATGGGCGTTaGTGGTGTAGAAGCCATTGC +
Preference number: 4 (lower is better)
Translates to: PVHRDVGPGLVVIRSKVAFWHGR*WCRSHC
Trigger: GCAATGGCTTCTACACCACCAACGCCCATGCCAGAA...TGCCACTTTGGACCTTATGACAACAAGGCCAGGCCCAACATCCCTGTGTACAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568613.5
CDS-3UTR CCA 90 bp CAGGGAAATTCCTTGTGGACAAAGGACAGACGGAACTGGAAGTCATCCCTCTGGTGCCCAAGAAGGGTTTaGAGGCATAGACGGGTGCGT +
Preference number: 4 (lower is better)
Translates to: QGNSLWTKDRRNWKSSLWCPRRV*RHRRVR
Trigger: ACGCACCCGTCTATGCCTCCAAACCCTTCTTGGGCA...CCAGAGGGATGACTTCCAGTTCCGTCTGTCCTTTGTCCACAAGGAATTTCCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
CDS-3UTR CCA 90 bp GCCCCGTTCCCTTACTGTTTACATAAAAATGCGGATTCACTGGGCCAGACTCAAACCGCCCTCGCTGACTaGTGCCCAAGAAGGGTTTGG +
Preference number: 4 (lower is better)
Translates to: APFPYCLHKNADSLGQTQTALAD*CPRRVW
Trigger: CCAAACCCTTCTTGGGCACCAGTCAGCGAGGGCGGT...TTGAGTCTGGCCCAGTGAATCCGCATTTTTATGTAAACAGTAAGGGAACGGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
CDS-3UTR CCA 90 bp CTAGTGGGACCAGAGGCACTTCTTGGGAATGGATTCTGGAGGTGTCAGACACTTGCGACGTGCAGGTCTTaGAGGAGCTCCAGTATCTTC +
Preference number: 4 (lower is better)
Translates to: LVGPEALLGNGFWRCQTLATCRS*RSSSIF
Trigger: GAAGATACTGGAGCTCCTCCAAGACCTGCACGTCGC...AAGTGTCTGACACCTCCAGAATCCATTCCCAAGAAGTGCCTCTGGTCCCACTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
CDS-3UTR CCA 90 bp CTAGTGGGACCAGAGGCACTTCTTGGGAATGGATTCTGGAGGTGTCAGACACTTCATGCTCGCAGGAGCTaGCCTCTAAACACGTGCATG +
Preference number: 4 (lower is better)
Translates to: LVGPEALLGNGFWRCQTLHARRS*PLNTCM
Trigger: CATGCACGTGTTTAGAGGCCAGCTCCTGCGAGCATG...AAGTGTCTGACACCTCCAGAATCCATTCCCAAGAAGTGCCTCTGGTCCCACTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568613.5
CDS-3UTR TCA 90 bp ATACTGATCTTGTGTCTCCCTAAGATGTATAAAGGCAAACTGTATCCCCAGCCATCACCTGGCCTGCAGTaGCGTGCCCTGGCCACCATG +
Preference number: 4 (lower is better)
Translates to: ILILCLPKMYKGKLYPQPSPGLQ*RALATM
Trigger: CATGGTGGCCAGGGCACGTCACTGCAGGCCAGGTGA...TGGCTGGGGATACAGTTTGCCTTTATACATCTTAGGGAGACACAAGATCAGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
CDS-3UTR TCA 90 bp CAGGGAAATTCCTTGTGGACAAAGGACAGACGGAACTGGAAGTCATCCCTCTGGCCTCTGGGGCTCCCCTaGGACAAACGCTTATATGAT +
Preference number: 4 (lower is better)
Translates to: QGNSLWTKDRRNWKSSLWPLGLP*DKRLYD
Trigger: ATCATATAAGCGTTTGTCTCAGGGGAGCCCCAGAGG...CCAGAGGGATGACTTCCAGTTCCGTCTGTCCTTTGTCCACAAGGAATTTCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
CDS-3UTR GCA 90 bp ATACTGATCTTGTGTCTCCCTAAGATGTATAAAGGCAAACTGTATCCCCAGCCACCGTCCTGTGAGCAGTaGCGCCCTCGGTCGTCCATG +
Preference number: 4 (lower is better)
Translates to: ILILCLPKMYKGKLYPQPPSCEQ*RPRSSM
Trigger: CATGGACGACCGAGGGCGGCACTGCTCACAGGACGG...TGGCTGGGGATACAGTTTGCCTTTATACATCTTAGGGAGACACAAGATCAGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567525.5
CDS-3UTR CCA 90 bp ATACTGATCTTGTGTCTCCCTAAGATGTATAAAGGCAAACTGTATCCCCAGCCAGGGACCAAGGCCTCCTaGTGCTGCTGGACGACCGAG +
Preference number: 4 (lower is better)
Translates to: ILILCLPKMYKGKLYPQPGTKAS*CCWTTE
Trigger: CTCGGTCGTCCAGCAGCACCAGGAGGCCTTGGTCCC...TGGCTGGGGATACAGTTTGCCTTTATACATCTTAGGGAGACACAAGATCAGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
CDS-3UTR TCA 90 bp TTCTTGGGAATGGATTCTGGAGGTGTCAGACACTTCCCTAACTTTTCACAGCCCTGCCGACAATCTTGCTaGCGTAGCCGGCCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: FLGMDSGGVRHFPNFSQPCRQSC*RSRPSS
Trigger: TGAAGAAGGCCGGCTACGTCAGCAAGATTGTCGGCA...GGGCTGTGAAAAGTTAGGGAAGTGTCTGACACCTCCAGAATCCATTCCCAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
CDS-3UTR TCA 90 bp AAATTCCTTGTGGACAAAGGACAGACGGAACTGGAAGTCATCCCTCTGGGGCTCAATCAATGCCCTGTCTaGAGTTCTCCCAGGAGTTGG +
Preference number: 4 (lower is better)
Translates to: KFLVDKGQTELEVIPLGLNQCPV*SSPRSW
Trigger: CCAACTCCTGGGAGAACTTCAGACAGGGCATTGATT...GAGCCCCAGAGGGATGACTTCCAGTTCCGTCTGTCCTTTGTCCACAAGGAATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
CDS-3UTR CCA 90 bp AAATTCCTTGTGGACAAAGGACAGACGGAACTGGAAGTCATCCCTCTGGGGCTCTGTACACAGGGATGTTaGGCCTGGCCTTGTTGTCAT +
Preference number: 4 (lower is better)
Translates to: KFLVDKGQTELEVIPLGLCTQGC*AWPCCH
Trigger: ATGACAACAAGGCCAGGCCCAACATCCCTGTGTACA...GAGCCCCAGAGGGATGACTTCCAGTTCCGTCTGTCCTTTGTCCACAAGGAATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268695.10
CDS-3UTR CCA 90 bp GCGTCCAGGGAAATTCCTTGTGGACAAAGGACAGACGGAACTGGAAGTCATCCCCAGGGAAATTCCTTGTaGACAAAGGACAGACGGAAC +
Preference number: 4 (lower is better)
Translates to: ASREIPCGQRTDGTGSHPQGNSL*TKDRRN
Trigger: GTTCCGTCTGTCCTTTGTCCACAAGGAATTTCCCTG...GGGATGACTTCCAGTTCCGTCTGTCCTTTGTCCACAAGGAATTTCCCTGGACGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
CDS-3UTR CCA 90 bp CACCTGCAGAGCCCAGCTCATCCAGCGAAGCTATGCTGGCCCAGAAGGAGTTACACAAAGTATCTACACTaGCCCAGAGGAACTTCAAAA +
Preference number: 4 (lower is better)
Translates to: HLQSPAHPAKLCWPRRSYTKYLH*PRGTSK
Trigger: TTTTGAAGTTCCTCTGGGCCAGTGTAGATACTTTGT...GTAACTCCTTCTGGGCCAGCATAGCTTCGCTGGATGAGCTGGGCTCTGCAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568311.1
3UTR CAA 72 bp CACGCCTCCCTCATAATTAGCGTCCAGGGAAATTCCTaGTGGACAAAGGACAGACGGAACTGGAAGTCATCC +
Preference number: 4 (lower is better)
Translates to: HASLIISVQGNS*WTKDRRNWKSS
Trigger: GGATGACTTCCAGTTCCGTCTGTCCTTTGTCCACAAGGAATTTCCCTGGACGCTAATTATGAGGGAGGCGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
CDS-3UTR TCA 90 bp GAGACAAACGCTTATATGATTGCCCCGTTCCCTTACTGTTTACATAAAAATGCGGGGTTCACAAAGGCGTaGGACGGCAGGGTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: ETNAYMIAPFPYCLHKNAGFTKA*DGRVLR
Trigger: CCTCAGGACCCTGCCGTCTCACGCCTTTGTGAACCC...CGCATTTTTATGTAAACAGTAAGGGAACGGGGCAATCATATAAGCGTTTGTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
CDS-3UTR GCA 90 bp AAATTCCTTGTGGACAAAGGACAGACGGAACTGGAAGTCATCCCTCTGGGGCTCCCAGTATCTTCCCAATaGTGTCATCAATCTCCCGGA +
Preference number: 4 (lower is better)
Translates to: KFLVDKGQTELEVIPLGLPVSSQ*CHQSPG
Trigger: TCCGGGAGATTGATGACAGCATTGGGAAGATACTGG...GAGCCCCAGAGGGATGACTTCCAGTTCCGTCTGTCCTTTGTCCACAAGGAATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
CDS-3UTR CCA 90 bp ATTGCCCCGTTCCCTTACTGTTTACATAAAAATGCGGATTCACTGGGCCAGACTTGGCATGGGCGTTGGTaGTGTAGAAGCCATTGCGGA +
Preference number: 4 (lower is better)
Translates to: IAPFPYCLHKNADSLGQTWHGRW*CRSHCG
Trigger: TCCGCAATGGCTTCTACACCACCAACGCCCATGCCA...AGTCTGGCCCAGTGAATCCGCATTTTTATGTAAACAGTAAGGGAACGGGGCAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
CDS-3UTR CCA 90 bp CCGTTCCCTTACTGTTTACATAAAAATGCGGATTCACTGGGCCAGACTCAATCGGTGTGTAGGCGTTTCTaGCATGGGCGTTGGTGGTGT +
Preference number: 4 (lower is better)
Translates to: PFPYCLHKNADSLGQTQSVCRRF*HGRWWC
Trigger: ACACCACCAACGCCCATGCCAGAAACGCCTACACAC...CGATTGAGTCTGGCCCAGTGAATCCGCATTTTTATGTAAACAGTAAGGGAACGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
CDS-3UTR CCA 90 bp CTCCCTAAGATGTATAAAGGCAAACTGTATCCCCAGCCACCTCAGGCACCTGTTTCCCTCCTTCAAACGTaGTCTGCTTCCCACACAGAA +
Preference number: 4 (lower is better)
Translates to: LPKMYKGKLYPQPPQAPVSLLQT*SASHTE
Trigger: TTCTGTGTGGGAAGCAGACCACGTTTGAAGGAGGGA...AACAGGTGCCTGAGGTGGCTGGGGATACAGTTTGCCTTTATACATCTTAGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
CDS-3UTR TCA 90 bp GCAGAGCCCAGCTCATCCAGCGAAGCTATGCTGGCCCAGAAGGAGTTACACAATGAGGAACTTCAAAAGTaGAAGGATGAAATTCTGAAG +
Preference number: 4 (lower is better)
Translates to: AEPSSSSEAMLAQKELHNEELQK*KDEILK
Trigger: CTTCAGAATTTCATCCTTTCACTTTTGAAGTTCCTC...ATTGTGTAACTCCTTCTGGGCCAGCATAGCTTCGCTGGATGAGCTGGGCTCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568311.1
CDS-3UTR CCA 90 bp ATTGCCCCGTTCCCTTACTGTTTACATAAAAATGCGGATTCACTGGGCCAGACTTCCCTCCTTCAAACGTaGTCTGCTTCCCACACAGAA +
Preference number: 4 (lower is better)
Translates to: IAPFPYCLHKNADSLGQTSLLQT*SASHTE
Trigger: TTCTGTGTGGGAAGCAGACCACGTTTGAAGGAGGGA...AGTCTGGCCCAGTGAATCCGCATTTTTATGTAAACAGTAAGGGAACGGGGCAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
CDS-3UTR CCA 90 bp GCCCCGTTCCCTTACTGTTTACATAAAAATGCGGATTCACTGGGCCAGACTCAACTGGTCTCAGATATTTaGGGTTCACAAAGGCGTGAG +
Preference number: 4 (lower is better)
Translates to: APFPYCLHKNADSLGQTQLVSDI*GSQRRE
Trigger: CTCACGCCTTTGTGAACCCCAAATATCTGAGACCAG...TTGAGTCTGGCCCAGTGAATCCGCATTTTTATGTAAACAGTAAGGGAACGGGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
CDS-3UTR GCA 90 bp CAGGGAAATTCCTTGTGGACAAAGGACAGACGGAACTGGAAGTCATCCCTCTGGAAACGCTTATATGATTaGCCCGTTCCCTTACTGTTT +
Preference number: 4 (lower is better)
Translates to: QGNSLWTKDRRNWKSSLWKRLYD*PVPLLF
Trigger: AAACAGTAAGGGAACGGGGCAATCATATAAGCGTTT...CCAGAGGGATGACTTCCAGTTCCGTCTGTCCTTTGTCCACAAGGAATTTCCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
CDS-3UTR GCA 90 bp ATACTGATCTTGTGTCTCCCTAAGATGTATAAAGGCAAACTGTATCCCCAGCCAAGGAAAAAGGGGTGGTaGCGTGCCTGTCTCTTAATG +
Preference number: 4 (lower is better)
Translates to: ILILCLPKMYKGKLYPQPRKKGW*RACLLM
Trigger: CATTAAGAGACAGGCACGGCACCACCCCTTTTTCCT...TGGCTGGGGATACAGTTTGCCTTTATACATCTTAGGGAGACACAAGATCAGTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
CDS-3UTR GCA 90 bp GAGACAAACGCTTATATGATTGCCCCGTTCCCTTACTGTTTACATAAAAATGCGGAAAAGCAGCCCTTCTaGAGCCATCCGGTCCAAATT +
Preference number: 4 (lower is better)
Translates to: ETNAYMIAPFPYCLHKNAEKQPF*SHPVQI
Trigger: AATTTGGACCGGATGGCTGCAGAAGGGCTGCTTTTC...CGCATTTTTATGTAAACAGTAAGGGAACGGGGCAATCATATAAGCGTTTGTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000268695.10
CDS-3UTR CCA 90 bp GAGACAAACGCTTATATGATTGCCCCGTTCCCTTACTGTTTACATAAAAATGCGGGCACTTCTTGGGAATaGATTCTGGAGGTGTCAGAC +
Preference number: 4 (lower is better)
Translates to: ETNAYMIAPFPYCLHKNAGTSWE*ILEVSD
Trigger: GTCTGACACCTCCAGAATCCATTCCCAAGAAGTGCC...CGCATTTTTATGTAAACAGTAAGGGAACGGGGCAATCATATAAGCGTTTGTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
CDS-3UTR CCA 90 bp CCCCGTCTTCAGATTAATAGGAAATTCTTCATAATATCACTTGCCGACAATCTTCTTGGGAATGGATTCTaGAGGTGTCAGACACTTCCC +
Preference number: 4 (lower is better)
Translates to: PRLQINRKFFIISLADNLLGNGF*RCQTLP
Trigger: GGGAAGTGTCTGACACCTCCAGAATCCATTCCCAAG...AAGATTGTCGGCAAGTGATATTATGAAGAATTTCCTATTAATCTGAAGACGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567525.5
CDS GCA 90 bp GCGCCCGAGGCCCCCATCCCCGCGGCGCTGAGCACCAGCAACAGCTaGCACCACCTCGTCGCCGCGACAACCGCCGCCATGGCAACCACG +
Preference number: 5 (lower is better)
Translates to: APEAPIPAALSTSNS*HHLVAATTAAMATT
Trigger: CGTGGTTGCCATGGCGGCGGTTGTCGCGGCGACGAGGTGGTGGCAGCTGTTGCTGGTGCTCAGCGCCGCGGGGATGGGGGCCTCGGGCGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268695.10
ENST00000568311.1
ENST00000569433.1
CDS CCA 90 bp CCAGCAACAGCTGCCACCACCTCGTCGCCGCGACAACCGCCGCCATaGCAACCACGGGAGCCGCGGAGCCCCGGCCAGCGAGCCGACCTA +
Preference number: 5 (lower is better)
Translates to: PATAATTSSPRQPPP*QPREPRSPGQRADL
Trigger: TAGGTCGGCTCGCTGGCCGGGGCTCCGCGGCTCCCGTGGTTGCCATGGCGGCGGTTGTCGCGGCGACGAGGTGGTGGCAGCTGTTGCTGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268695.10
ENST00000568311.1
ENST00000569433.1
CDS TCA 90 bp GGAGGACGCTGTCCCGGTCATGCAGCACAGTGGCAGCGCGTGTGGTaGTCGGTGACCGCCGAGACCCCACGCCTGGACCCCGCGGCCACT +
Preference number: 5 (lower is better)
Translates to: GGRCPGHAAQWQRVW*SVTAETPRLDPAAT
Trigger: AGTGGCCGCGGGGTCCAGGCGTGGGGTCTCGGCGGTCACCGATCACCACACGCGCTGCCACTGTGCTGCATGACCGGGACAGCGTCCTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562831.1
CDS-3UTR CAA 90 bp CCGTGGCCCCCACTGGTCAGCACAGGTGGGTCTGAAGGCACCTGTCAGGGTCTCACGACTGCCCAGCCCTaGGGTGTGGCCCGTGGCCCC +
Preference number: 5 (lower is better)
Translates to: PWPPLVSTGGSEGTCQGLTTAQP*GVARGP
Trigger: GGGGCCACGGGCCACACCCAAGGGCTGGGCAGTCGT...GAGACCCTGACAGGTGCCTTCAGACCCACCTGTGCTGACCAGTGGGGGCCACGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569433.1
CDS GCA 90 bp AATCTCATCCTCCGGCCCACAGCAGCCCTGCAGGCCACACCTCTGTaGCCACTCGCCCTGGCCCCCAGGCCAGCTGTCCGGGTTTCCTTG +
Preference number: 5 (lower is better)
Translates to: NLILRPTAALQATPL*PLALAPRPAVRVSL
Trigger: CAAGGAAACCCGGACAGCTGGCCTGGGGGCCAGGGCGAGTGGGCACAGAGGTGTGGCCTGCAGGGCTGCTGTGGGCCGGAGGATGAGATT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561812.1
CDS-3UTR CAA 90 bp CCCTGGCCACCATGCGAGGGCAGGCTCCCTCATCCCTCCTTCAAACGTGGTCTGGCCCAGTTGCACACGTaGAGCTGGGGCTGCGCGGGG +
Preference number: 5 (lower is better)
Translates to: PWPPCEGRLPHPSFKRGLAQLHT*SWGCAG
Trigger: CCCCGCGCAGCCCCAGCTCAACGTGTGCAACTGGGC...CAGACCACGTTTGAAGGAGGGATGAGGGAGCCTGCCCTCGCATGGTGGCCAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
CDS GCA 90 bp TGTGCCCACTCGCCCTGGCCCCCAGGCCAGCTGTCCGGGTTTCCTTaGGCAGCCTGTCCTGTCCTGGAACGAATCCAGCTTGCGGCTGCT +
Preference number: 5 (lower is better)
Translates to: CAHSPWPPGQLSGFP*AACPVLERIQLAAA
Trigger: AGCAGCCGCAAGCTGGATTCGTTCCAGGACAGGACAGGCTGCGCAAGGAAACCCGGACAGCTGGCCTGGGGGCCAGGGCGAGTGGGCACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561812.1
CDS GCA 90 bp GGGCACGGCACCCATTCCACTGAAAGACGCGTGGCCCTTGGGCCCTaGAGCTCAGCGTTGTCCCCAAGACCCCGCCTCCTTTCGCAGGCT +
Preference number: 5 (lower is better)
Translates to: GHGTHSTERRVALGP*SSALSPRPRLLSQA
Trigger: AGCCTGCGAAAGGAGGCGGGGTCTTGGGGACAACGCTGAGCTGCAGGGCCCAAGGGCCACGCGTCTTTCAGTGGAATGGGTGCCGTGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562593.5
CDS CCA 90 bp GGCTGCCACGCCTGTCAATCCCCGTTAGCGTCTCCACCACCTGGGTaGGGCACGGCACCCATTCCACTGAAAGACGCGTGGCCCTTGGGC +
Preference number: 5 (lower is better)
Translates to: GCHACQSPLASPPPG*GTAPIPLKDAWPLG
Trigger: GCCCAAGGGCCACGCGTCTTTCAGTGGAATGGGTGCCGTGCCCCACCCAGGTGGTGGAGACGCTAACGGGGATTGACAGGCGTGGCAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562593.5
CDS-3UTR CAA 90 bp GGGTTGGGGGAGGACCGAGGCCAGAGCCATCCTTCCTCCAGGCACTTGCAGGGCGCCGTTGCTGCCACCTaGTTCGGGGGCGGAAATGAG +
Preference number: 5 (lower is better)
Translates to: GLGEDRGQSHPSSRHLQGAVAAT*FGGGNE
Trigger: CTCATTTCCGCCCCCGAACAAGGTGGCAGCAACGGC...GCCCTGCAAGTGCCTGGAGGAAGGATGGCTCTGGCCTCGGTCCTCCCCCAACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268695.10
ENST00000567525.5
ENST00000568613.5
CDS TCA 90 bp GCGTCCAGGGCAGCACGACTCAGTGGCCAAAAGGCAGGAGCACCCTaGGCGCCCATCGGCAGACGACAAAGTGCGGCCGGCGTGTACTAC +
Preference number: 5 (lower is better)
Translates to: ASRAARLSGQKAGAP*APIGRRQSAAGVYY
Trigger: GTAGTACACGCCGGCCGCACTTTGTCGTCTGCCGATGGGCGCTCAGGGTGCTCCTGCCTTTTGGCCACTGAGTCGTGCTGCCCTGGACGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562593.5
CDS GCA 90 bp CTGCAGGGAAGAGCACGGGGAGGAGGAATGAGCGCCTTCTGCAGGTaGTTCTGGCCTGGGGAGCTGCCCATGGTGCCAAGAGCGTGTCGG +
Preference number: 5 (lower is better)
Translates to: LQGRARGGGMSAFCR*FWPGELPMVPRACR
Trigger: CCGACACGCTCTTGGCACCATGGGCAGCTCCCCAGGCCAGAAGCACCTGCAGAAGGCGCTCATTCCTCCTCCCCGTGCTCTTCCCTGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562593.5
CDS CCA 90 bp GGACTTTGCTCTAGAAGGAGAAGGGGAGGGCACCGCCTGGGGCTTTaGCTCTCCTCGGATCCTCCAGCCGTCTCCCTGAGCGCCCACCTC +
Preference number: 5 (lower is better)
Translates to: GLCSRRRRGGHRLGL*LSSDPPAVSLSAHL
Trigger: GAGGTGGGCGCTCAGGGAGACGGCTGGAGGATCCGAGGAGAGCCAAAGCCCCAGGCGGTGCCCTCCCCTTCTCCTTCTAGAGCAAAGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562593.5
CDS CCA 90 bp AGCACGGGGAGGAGGAATGAGCGCCTTCTGCAGGTGCTTCTGGCCTaGGGAGCTGCCCATGGTGCCAAGAGCGTGTCGGGGACCGTGGAA +
Preference number: 5 (lower is better)
Translates to: STGRRNERLLQVLLA*GAAHGAKSVSGTVE
Trigger: TTCCACGGTCCCCGACACGCTCTTGGCACCATGGGCAGCTCCCCAGGCCAGAAGCACCTGCAGAAGGCGCTCATTCCTCCTCCCCGTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562593.5
CDS CCA 90 bp GGATACTCGCGGCCGTGGGACCAGCCTGGTGACCTGAGATCCTGCTaGCAAGGTCACGCTGGCCTGCACAGGGACGCTGGAGACACCACT +
Preference number: 5 (lower is better)
Translates to: GYSRPWDQPGDLRSC*QGHAGLHRDAGDTT
Trigger: AGTGGTGTCTCCAGCGTCCCTGTGCAGGCCAGCGTGACCTTGCCAGCAGGATCTCAGGTCACCAGGCTGGTCCCACGGCCGCGAGTATCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565364.1
CDS CCA 90 bp GGTGACAGGCCTGCGGAGTCTGATGCCGCAGGATACTCGCGGCCGTaGGACCAGCCTGGTGACCTGAGATCCTGCTGGCAAGGTCACGCT +
Preference number: 5 (lower is better)
Translates to: GDRPAESDAAGYSRP*DQPGDLRSCWQGHA
Trigger: AGCGTGACCTTGCCAGCAGGATCTCAGGTCACCAGGCTGGTCCCACGGCCGCGAGTATCCTGCGGCATCAGACTCCGCAGGCCTGTCACC
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565364.1
ENST00000567779.1
CDS-3UTR CAA 90 bp TGGGGCTGCGCGGGGACCAAGGCCTCCTGGTGCTGCTGGACGACCGAGGTGATCCGCGACGTGCAGGTCTaGGAGGAGCTCCAGTATCTT +
Preference number: 5 (lower is better)
Translates to: WGCAGTKASWCCWTTEVIRDVQV*EELQYL
Trigger: AAGATACTGGAGCTCCTCCAAGACCTGCACGTCGCG...GATCACCTCGGTCGTCCAGCAGCACCAGGAGGCCTTGGTCCCCGCGCAGCCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
CDS-3UTR CAA 90 bp GGCAGGTGGAATTGTGCAGTCCCCCTGCGTCTGCAGGTGCTGTCTGTCTGGCTTGCCCAGTTGCACACGTaGAGCTGGGGCTGCGCGGGG +
Preference number: 5 (lower is better)
Translates to: GRWNCAVPLRLQVLSVWLAQLHT*SWGCAG
Trigger: CCCCGCGCAGCCCCAGCTCAACGTGTGCAACTGGGC...AAGCCAGACAGACAGCACCTGCAGACGCAGGGGGACTGCACAATTCCACCTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
CDS-3UTR CAA 90 bp ATGACCGCCCAGTTGCACACGTTGAGCTGGGGCTGCGCGGGGACCAAGGCCTCCTTCATGACCGCCCAGTaGCACACGTTGAGCTGGGGC +
Preference number: 5 (lower is better)
Translates to: MTAQLHTLSWGCAGTKASFMTAQ*HTLSWG
Trigger: GCCCCAGCTCAACGTGTGCAACTGGGCGGTCATGAA...GGAGGCCTTGGTCCCCGCGCAGCCCCAGCTCAACGTGTGCAACTGGGCGGTCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
CDS GCA 90 bp GGGGCCGCTCCACGGTCAGCCCACGCTGTCTTTCGCCTCCACTTCTaGTTGGTCTTCAGGTGGGGAATGTGTCCGTCTGCCTCCTCCCAG +
Preference number: 5 (lower is better)
Translates to: GAAPRSAHAVFRLHF*LVFRWGMCPSASSQ
Trigger: CTGGGAGGAGGCAGACGGACACATTCCCCACCTGAAGACCAAGCAGAAGTGGAGGCGAAAGACAGCGTGGGCTGACCGTGGAGCGGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000562593.5
ENST00000565364.1
ENST00000568613.5
CDS GCA 90 bp GGAGTGGGACTCCTGCTTCCCAGGTACCCTGAGACGGAGCCACACTaGAGCACCTCTCCCCAGGCGGCCACAGCACTCGACTCTGGGAAA +
Preference number: 5 (lower is better)
Translates to: GVGLLLPRYPETEPH*STSPQAATALDSGK
Trigger: TTTCCCAGAGTCGAGTGCTGTGGCCGCCTGGGGAGAGGTGCTGCAGTGTGGCTCCGTCTCAGGGTACCTGGGAAGCAGGAGTCCCACTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562593.5
CDS CCA 90 bp CCCCAGGCCAGCTGTCCGGGTTTCCTTGCGCAGCCTGTCCTGTCCTaGAACGAATCCAGCTTGCGGCTGCTCTTCAGAACGGGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: PQASCPGFLAQPVLS*NESSLRLLFRTGCR
Trigger: CCTGCAGCCCGTTCTGAAGAGCAGCCGCAAGCTGGATTCGTTCCAGGACAGGACAGGCTGCGCAAGGAAACCCGGACAGCTGGCCTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561812.1
CDS CCA 90 bp CGCAGACATGCAGTAGAGATGCCGGGTGAAGGCCGAGGCCGAGACTaGAGTGACGCAGCCACCAGCCAGGGGACAGCAAGGACCTTCCTG +
Preference number: 5 (lower is better)
Translates to: RRHAVEMPGEGRGRD*SDAATSQGTARTFL
Trigger: CAGGAAGGTCCTTGCTGTCCCCTGGCTGGTGGCTGCGTCACTCCAGTCTCGGCCTCGGCCTTCACCCGGCATCTCTACTGCATGTCTGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562593.5
CDS GCA 90 bp AGACAGACGCGTGACAGACGAGGCACGCGCAGGTTTACAAGGGGCTaGCACGCCTGTCAATCCCCGTTAGCGTCTCCACCACCTGGGTGG +
Preference number: 5 (lower is better)
Translates to: RQTRDRRGTRRFTRG*HACQSPLASPPPGW
Trigger: CCACCCAGGTGGTGGAGACGCTAACGGGGATTGACAGGCGTGGCAGCCCCTTGTAAACCTGCGCGTGCCTCGTCTGTCACGCGTCTGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562593.5
CDS CCA 90 bp GCTCCAAGCACCAACCAAGACACCAGTGAAGTGACTGTGCCTGCCTaGGCCCCTGCCCTCTACAGGCCGCCTTCAGCAGCTTCGGCAGCA +
Preference number: 5 (lower is better)
Translates to: APSTNQDTSEVTVPA*APALYRPPSAASAA
Trigger: TGCTGCCGAAGCTGCTGAAGGCGGCCTGTAGAGGGCAGGGGCCCAGGCAGGCACAGTCACTTCACTGGTGTCTTGGTTGGTGCTTGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562593.5
CDS CCA 90 bp CCGCTCCACGGTCAGCCCACGCTGTCTTTCGCCTCCACTTCTGCTTaGTCTTCAGGTGGGGAATGTGTCCGTCTGCCTCCTCCCAGCCTG +
Preference number: 5 (lower is better)
Translates to: PLHGQPTLSFASTSA*SSGGECVRLPPPSL
Trigger: CAGGCTGGGAGGAGGCAGACGGACACATTCCCCACCTGAAGACCAAGCAGAAGTGGAGGCGAAAGACAGCGTGGGCTGACCGTGGAGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562593.5
ENST00000565364.1
ENST00000568613.5
CDS CCA 90 bp CAGTGCAGAGAAAGGCCCGGCTACTGCTGTCAGGACACGGACCCCTaGGCGCTGGAGAGCGTGCTCTGGAAAGCAGTCACTTCGCTCAGC +
Preference number: 5 (lower is better)
Translates to: QCRERPGYCCQDTDP*ALESVLWKAVTSLS
Trigger: GCTGAGCGAAGTGACTGCTTTCCAGAGCACGCTCTCCAGCGCCCAGGGGTCCGTGTCCTGACAGCAGTAGCCGGGCCTTTCTCTGCACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568311.1
CDS-3UTR CAA 90 bp GGGGAGGACCGAGGCCAGAGCCATCCTTCCTCCAGGCACTTGCAGGGCCAACCGAAGAAGACGAAGGTGTaGTCCGCGACGTGCAGGTCT +
Preference number: 5 (lower is better)
Translates to: GEDRGQSHPSSRHLQGQPKKTKV*SATCRS
Trigger: AGACCTGCACGTCGCGGACAACACCTTCGTCTTCTT...CGGTTGGCCCTGCAAGTGCCTGGAGGAAGGATGGCTCTGGCCTCGGTCCTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268695.10
ENST00000567525.5
ENST00000568613.5
CDS-3UTR CAA 90 bp GAATTGTGCAGTCCCCCTGCGTCTGCAGGTGCTGTCTGTCTGGCTTGGGCAGGGAGGGTGGGGAGGAGGTaGAGGCCATCAATGGCCCTG +
Preference number: 5 (lower is better)
Translates to: ELCSPPASAGAVCLAWAGRVGRR*RPSMAL
Trigger: CAGGGCCATTGATGGCCTCAACCTCCTCCCCACCCT...CCCTGCCCAAGCCAGACAGACAGCACCTGCAGACGCAGGGGGACTGCACAATTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
CDS-3UTR CAA 90 bp GTCCTGGGCAGGTGGAATTGTGCAGTCCCCCTGCGTCTGCAGGTGCTGTCTGTCAGGGTGGGGAGGAGGTaGAGGCCATCAATGGCCCTG +
Preference number: 5 (lower is better)
Translates to: VLGRWNCAVPLRLQVLSVRVGRR*RPSMAL
Trigger: CAGGGCCATTGATGGCCTCAACCTCCTCCCCACCCT...GACAGACAGCACCTGCAGACGCAGGGGGACTGCACAATTCCACCTGCCCAGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
CDS-3UTR CAA 90 bp CGGCGTCTCCATACCGCCCTCGCTGACTGGTGCCCAAGAAGGGTTTGGAGGCATAGGGTGGGGAGGAGGTaGAGGCCATCAATGGCCCTG +
Preference number: 5 (lower is better)
Translates to: RRLHTALADWCPRRVWRHRVGRR*RPSMAL
Trigger: CAGGGCCATTGATGGCCTCAACCTCCTCCCCACCCT...ATGCCTCCAAACCCTTCTTGGGCACCAGTCAGCGAGGGCGGTATGGAGACGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
CDS-3UTR CAA 90 bp GGTCCTGGGCAGGTGGAATTGTGCAGTCCCCCTGCGTCTGCAGGTGCTGTCTGTCCTGGGCAGGTGGAATaGTGCAGTCCCCCTGCGTCT +
Preference number: 5 (lower is better)
Translates to: GPGQVELCSPPASAGAVCPGQVE*CSPPAS
Trigger: AGACGCAGGGGGACTGCACAATTCCACCTGCCCAGG...ACAGACAGCACCTGCAGACGCAGGGGGACTGCACAATTCCACCTGCCCAGGACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
CDS-3UTR CAA 90 bp TCTGGTACTCGGTGTCGTCCCAGTCCTCACACACAACGTGAGCACGGCGGGACACCCCTGACCCCGCACTaGCCCACCAGGAGACATTCC +
Preference number: 5 (lower is better)
Translates to: SGTRCRPSPHTQREHGGTPLTPH*PTRRHS
Trigger: GGAATGTCTCCTGGTGGGCAAGTGCGGGGTCAGGGG...TGTCCCGCCGTGCTCACGTTGTGTGTGAGGACTGGGACGACACCGAGTACCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569433.1
CDS TCA 90 bp TTCCCTCCTGAGGTGCTCCAAGCACCAACCAAGACACCAGTGAAGTaGCTGTGCCTGCCTGGGCCCCTGCCCTCTACAGGCCGCCTTCAG +
Preference number: 5 (lower is better)
Translates to: FPPEVLQAPTKTPVK*LCLPGPLPSTGRLQ
Trigger: CTGAAGGCGGCCTGTAGAGGGCAGGGGCCCAGGCAGGCACAGTCACTTCACTGGTGTCTTGGTTGGTGCTTGGAGCACCTCAGGAGGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562593.5
CDS TCA 90 bp TGGGCAGGCGTGGCCAGGAGACTTACCACTTGCCGACAATCTTGCTaGCGTAGCCGGCCTTCTTCAGAAGCTCCGGCAGGAGCTGCTCCG +
Preference number: 5 (lower is better)
Translates to: WAGVARRLTTCRQSC*RSRPSSEAPAGAAP
Trigger: CGGAGCAGCTCCTGCCGGAGCTTCTGAAGAAGGCCGGCTACGTCAGCAAGATTGTCGGCAAGTGGTAAGTCTCCTGGCCACGCCTGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567779.1
CDS GCA 90 bp TGGGCGTGCAGGTCCACACGCCCCCATCCTCGAGCACCAGCCCCGTaGCCTGCCTTCTCCTCTTCCTCACGATCAACACCACATGTTTCT +
Preference number: 5 (lower is better)
Translates to: WACRSTRPHPRAPAP*PAFSSSSRSTPHVS
Trigger: AGAAACATGTGGTGTTGATCGTGAGGAAGAGGAGAAGGCAGGGCACGGGGCTGGTGCTCGAGGATGGGGGCGTGTGGACCTGCACGCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562593.5
CDS CCA 90 bp TTGCGGCTGCTCTTCAGAACGGGCTGCAGGAGAGGTGGTATGAGATaGCTTCTAGGCACGGCCGTGGGCGGGTCTCACGTCAGTTGCGTG +
Preference number: 5 (lower is better)
Translates to: LRLLFRTGCRRGGMR*LLGTAVGGSHVSCV
Trigger: CACGCAACTGACGTGAGACCCGCCCACGGCCGTGCCTAGAAGCCATCTCATACCACCTCTCCTGCAGCCCGTTCTGAAGAGCAGCCGCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561812.1
CDS CCA 90 bp CGAATCCAGCTTGCGGCTGCTCTTCAGAACGGGCTGCAGGAGAGGTaGTATGAGATGGCTTCTAGGCACGGCCGTGGGCGGGTCTCACGT +
Preference number: 5 (lower is better)
Translates to: RIQLAAALQNGLQER*YEMASRHGRGRVSR
Trigger: ACGTGAGACCCGCCCACGGCCGTGCCTAGAAGCCATCTCATACCACCTCTCCTGCAGCCCGTTCTGAAGAGCAGCCGCAAGCTGGATTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561812.1
CDS CCA 90 bp CCTGAGATCCTGCTGGCAAGGTCACGCTGGCCTGCACAGGGACGCTaGAGACACCTGAACACACCCAGAATCAGCTGCCGTTTCCCACCC +
Preference number: 5 (lower is better)
Translates to: PEILLARSRWPAQGR*RHLNTPRISCRFPP
Trigger: GGGTGGGAAACGGCAGCTGATTCTGGGTGTGTTCAGGTGTCTCCAGCGTCCCTGTGCAGGCCAGCGTGACCTTGCCAGCAGGATCTCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567779.1
CDS CCA 90 bp GAGAAAGGCCCGGCTACTGCTGTCAGGACACGGACCCCTGGGCGCTaGAGAGCGTGCTCTGGAAAGCAGTCACTTCGCTCAGCATTCTCC +
Preference number: 5 (lower is better)
Translates to: EKGPATAVRTRTPGR*RACSGKQSLRSAFS
Trigger: GGAGAATGCTGAGCGAAGTGACTGCTTTCCAGAGCACGCTCTCCAGCGCCCAGGGGTCCGTGTCCTGACAGCAGTAGCCGGGCCTTTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568311.1
CDS-3UTR CAA 90 bp CCAGAGCCATCCTTCCTCCAGGCACTTGCAGGGCCAACCGGAGATTCTAGGCCTGCCGTTGCTGCCACCTaGTTCGGGGGCGGAAATGAG +
Preference number: 5 (lower is better)
Translates to: PEPSFLQALAGPTGDSRPAVAAT*FGGGNE
Trigger: CTCATTTCCGCCCCCGAACAAGGTGGCAGCAACGGC...AGGCCTAGAATCTCCGGTTGGCCCTGCAAGTGCCTGGAGGAAGGATGGCTCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268695.10
ENST00000567525.5
ENST00000568613.5
CDS-3UTR CAA 90 bp GAAGACGAAGGTGTTGTCCGCGACGTGCAGGTCTTGGAGGAGCTCCAGTATCTTGCCCAGTTGCACACGTaGAGCTGGGGCTGCGCGGGG +
Preference number: 5 (lower is better)
Translates to: EDEGVVRDVQVLEELQYLAQLHT*SWGCAG
Trigger: CCCCGCGCAGCCCCAGCTCAACGTGTGCAACTGGGC...AAGATACTGGAGCTCCTCCAAGACCTGCACGTCGCGGACAACACCTTCGTCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
CDS TCA 90 bp ACATATTCCCTCCTGAGGTGCTCCAAGCACCAACCAAGACACCAGTaGAGTGACTGTGCCTGCCTGGGCCCCTGCCCTCTACAGGCCGCC +
Preference number: 5 (lower is better)
Translates to: TYSLLRCSKHQPRHQ*SDCACLGPCPLQAA
Trigger: GGCGGCCTGTAGAGGGCAGGGGCCCAGGCAGGCACAGTCACTTCACTGGTGTCTTGGTTGGTGCTTGGAGCACCTCAGGAGGGAATATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562593.5
CDS TCA 90 bp TGGGAAACAGAACAGCAGCCACCAACAATACCGCAACTTCGACCCTaGAAACCCAGCAGGTGCCGCACCCCACATGGCACGGAGCCGGGC +
Preference number: 5 (lower is better)
Translates to: WETEQQPPTIPQLRP*KPSRCRTPHGTEPG
Trigger: GCCCGGCTCCGTGCCATGTGGGGTGCGGCACCTGCTGGGTTTTCAGGGTCGAAGTTGCGGTATTGTTGGTGGCTGCTGTTCTGTTTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562593.5
CDS TCA 90 bp CTGGTGGTGAAGAGGTCCATGATGCTGCCCAGCTGGTGGCTCACCTaGAACACATGGCAGCAACACGGTCAGGGCACTCTGCACCGACCC +
Preference number: 5 (lower is better)
Translates to: LVVKRSMMLPSWWLT*NTWQQHGQGTLHRP
Trigger: GGGTCGGTGCAGAGTGCCCTGACCGTGTTGCTGCCATGTGTTTCAGGTGAGCCACCAGCTGGGCAGCATCATGGACCTCTTCACCACCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564263.1
CDS TCA 90 bp TGCTGGCAAGGTCACGCTGGCCTGCACAGGGACGCTGGAGACACCTaGACACACCCAGAATCAGCTGCCGTTTCCCACCCAAGACACCCT +
Preference number: 5 (lower is better)
Translates to: CWQGHAGLHRDAGDT*THPESAAVSHPRHP
Trigger: AGGGTGTCTTGGGTGGGAAACGGCAGCTGATTCTGGGTGTGTTCAGGTGTCTCCAGCGTCCCTGTGCAGGCCAGCGTGACCTTGCCAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567779.1
CDS GCA 90 bp CTGTCCTGGAACGAATCCAGCTTGCGGCTGCTCTTCAGAACGGGCTaGAGGAGAGGTGGTATGAGATGGCTTCTAGGCACGGCCGTGGGC +
Preference number: 5 (lower is better)
Translates to: LSWNESSLRLLFRTG*RRGGMRWLLGTAVG
Trigger: GCCCACGGCCGTGCCTAGAAGCCATCTCATACCACCTCTCCTGCAGCCCGTTCTGAAGAGCAGCCGCAAGCTGGATTCGTTCCAGGACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561812.1
CDS GCA 90 bp GTGCAGGTCCACACGCCCCCATCCTCGAGCACCAGCCCCGTGCCCTaGCTTCTCCTCTTCCTCACGATCAACACCACATGTTTCTGTCTC +
Preference number: 5 (lower is better)
Translates to: VQVHTPPSSSTSPVP*LLLFLTINTTCFCL
Trigger: GAGACAGAAACATGTGGTGTTGATCGTGAGGAAGAGGAGAAGGCAGGGCACGGGGCTGGTGCTCGAGGATGGGGGCGTGTGGACCTGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562593.5
CDS CCA 90 bp GAACCAAGGCCAGGAAGTGGATGGAGCAGGACGCCTGGGCAGGCGTaGCCAGGAGACTTACCACTTGCCGACAATCTTGCTGACGTAGCC +
Preference number: 5 (lower is better)
Translates to: EPRPGSGWSRTPGQA*PGDLPLADNLADVA
Trigger: GGCTACGTCAGCAAGATTGTCGGCAAGTGGTAAGTCTCCTGGCCACGCCTGCCCAGGCGTCCTGCTCCATCCACTTCCTGGCCTTGGTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567779.1
CDS-3UTR CAA 90 bp GGCAGGTGGAATTGTGCAGTCCCCCTGCGTCTGCAGGTGCTGTCTGTCTGGCTTTTCATGACCGCCCAGTaGCACACGTTGAGCTGGGGC +
Preference number: 5 (lower is better)
Translates to: GRWNCAVPLRLQVLSVWLFMTAQ*HTLSWG
Trigger: GCCCCAGCTCAACGTGTGCAACTGGGCGGTCATGAA...AAGCCAGACAGACAGCACCTGCAGACGCAGGGGGACTGCACAATTCCACCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
CDS TCA 90 bp CTTGGTCTTCAGGTGGGGAATGTGTCCGTCTGCCTCCTCCCAGCCTaGCACCAGCATCTGCATGCTCGCAGGAGCTGGCCTCTAAACACG +
Preference number: 5 (lower is better)
Translates to: LGLQVGNVSVCLLPA*HQHLHARRSWPLNT
Trigger: CGTGTTTAGAGGCCAGCTCCTGCGAGCATGCAGATGCTGGTGTCAGGCTGGGAGGAGGCAGACGGACACATTCCCCACCTGAAGACCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562593.5
ENST00000565364.1
ENST00000568613.5
CDS TCA 90 bp ACAGGCGGGGAACGCTCCAACAAGTGGAGAGAAATTCGGGACAGGTaGCTCCTACCCAACCCTCTAGGCTCACTCAGGCGTCCCAGGGAG +
Preference number: 5 (lower is better)
Translates to: TGGERSNKWREIRDR*LLPNPLGSLRRPRE
Trigger: CTCCCTGGGACGCCTGAGTGAGCCTAGAGGGTTGGGTAGGAGTCACCTGTCCCGAATTTCTCTCCACTTGTTGGAGCGTTCCCCGCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565364.1
CDS CCA 90 bp TCAGCCCACGCTGTCTTTCGCCTCCACTTCTGCTTGGTCTTCAGGTaGGGAATGTGTCCGTCTGCCTCCTCCCAGCCTGACACCAGCATC +
Preference number: 5 (lower is better)
Translates to: SAHAVFRLHFCLVFR*GMCPSASSQPDTSI
Trigger: GATGCTGGTGTCAGGCTGGGAGGAGGCAGACGGACACATTCCCCACCTGAAGACCAAGCAGAAGTGGAGGCGAAAGACAGCGTGGGCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562593.5
ENST00000565364.1
ENST00000568613.5
CDS-3UTR CAA 90 bp GGTCCTGGGCAGGTGGAATTGTGCAGTCCCCCTGCGTCTGCAGGTGCTGTCTGTCTGTACACAGGGATGTaGGGCCTGGCCTTGTTGTCA +
Preference number: 5 (lower is better)
Translates to: GPGQVELCSPPASAGAVCLYTGM*GLALLS
Trigger: TGACAACAAGGCCAGGCCCAACATCCCTGTGTACAG...ACAGACAGCACCTGCAGACGCAGGGGGACTGCACAATTCCACCTGCCCAGGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000268695.10
CDS-3UTR CAA 90 bp GGCAGGTGGAATTGTGCAGTCCCCCTGCGTCTGCAGGTGCTGTCTGTCTGGCTTCGCGACGTGCAGGTCTaGGAGGAGCTCCAGTATCTT +
Preference number: 5 (lower is better)
Translates to: GRWNCAVPLRLQVLSVWLRDVQV*EELQYL
Trigger: AAGATACTGGAGCTCCTCCAAGACCTGCACGTCGCG...AAGCCAGACAGACAGCACCTGCAGACGCAGGGGGACTGCACAATTCCACCTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
CDS-3UTR CAA 90 bp CGGTCCAAATTCGGGGTCTCTCTGGAGGGCTCTCCATACACCCCGAGGTCACCCAAGAAGACGAAGGTGTaGTCCGCGACGTGCAGGTCT +
Preference number: 5 (lower is better)
Translates to: RSKFGVSLEGSPYTPRSPKKTKV*SATCRS
Trigger: AGACCTGCACGTCGCGGACAACACCTTCGTCTTCTT...GGGTGACCTCGGGGTGTATGGAGAGCCCTCCAGAGAGACCCCGAATTTGGACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568613.5
CDS-3UTR CAA 90 bp TTGTCCGACGTGAAGAAGACGAAGGTGTTGTCCGCGACGTGCAGGTCTTGGAGGGCCGTTGCTGCCACCTaGTTCGGGGGCGGAAATGAG +
Preference number: 5 (lower is better)
Translates to: LSDVKKTKVLSATCRSWRAVAAT*FGGGNE
Trigger: CTCATTTCCGCCCCCGAACAAGGTGGCAGCAACGGC...CCTCCAAGACCTGCACGTCGCGGACAACACCTTCGTCTTCTTCACGTCGGACAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
CDS-3UTR CAA 90 bp TGGCCTGAGTCTGCGCAGGTGCTAGTGGGACCAGAGGCACTTCTTGGGAATGGATTCATGACCGCCCAGTaGCACACGTTGAGCTGGGGC +
Preference number: 5 (lower is better)
Translates to: WPESAQVLVGPEALLGNGFMTAQ*HTLSWG
Trigger: GCCCCAGCTCAACGTGTGCAACTGGGCGGTCATGAA...TCCATTCCCAAGAAGTGCCTCTGGTCCCACTAGCACCTGCGCAGACTCAGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
CDS-3UTR CAA 90 bp GACGTGAAGAAGACGAAGGTGTTGTCCGCGACGTGCAGGTCTTGGAGGAGCTCCCCTTCCTCCAGGCACTaGCAGGGCCAACCGGAGATT +
Preference number: 5 (lower is better)
Translates to: DVKKTKVLSATCRSWRSSPSSRH*QGQPEI
Trigger: AATCTCCGGTTGGCCCTGCAAGTGCCTGGAGGAAGG...GGAGCTCCTCCAAGACCTGCACGTCGCGGACAACACCTTCGTCTTCTTCACGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
CDS-3UTR CAA 90 bp GGACAAAGGACAGACGGAACTGGAAGTCATCCCTCTGGGGCTCCCCTGAGACAACCTGGGCAGGTGGAATaGTGCAGTCCCCCTGCGTCT +
Preference number: 5 (lower is better)
Translates to: GQRTDGTGSHPSGAPLRQPGQVE*CSPPAS
Trigger: AGACGCAGGGGGACTGCACAATTCCACCTGCCCAGG...TTGTCTCAGGGGAGCCCCAGAGGGATGACTTCCAGTTCCGTCTGTCCTTTGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
CDS TCA 90 bp TCTAGGCACGGCCGTGGGCGGGTCTCACGTCAGTTGCGTGTCGTCTaGGGAAAGTTCTTCTGCAGCTACGGCTTTGAAAGCAGCATCCCC +
Preference number: 5 (lower is better)
Translates to: SRHGRGRVSRQLRVV*GKFFCSYGFESSIP
Trigger: GGGGATGCTGCTTTCAAAGCCGTAGCTGCAGAAGAACTTTCCTCAGACGACACGCAACTGACGTGAGACCCGCCCACGGCCGTGCCTAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561812.1
CDS TCA 90 bp GGGCGTTGGTGGTGTAGAAGCCATTGCGGATGGGTAGCCGTCCTGTaGGCAGTGCCGCCCTCGCTATGTGGAGGTGACAGAAACAGAAAC +
Preference number: 5 (lower is better)
Translates to: GRWWCRSHCGWVAVL*AVPPSLCGGDRNRN
Trigger: GTTTCTGTTTCTGTCACCTCCACATAGCGAGGGCGGCACTGCTCACAGGACGGCTACCCATCCGCAATGGCTTCTACACCACCAACGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562593.5
ENST00000567779.1
CDS GCA 90 bp TTTCAGCTTTGTGGGCCATATGGGGCTGTCACAGCCCCTCAGCCCTaGCACAAGCCAGCATGCGAGCAGATGTGCACGCTCTGTGCCAAT +
Preference number: 5 (lower is better)
Translates to: FQLCGPYGAVTAPQP*HKPACEQMCTLCAN
Trigger: ATTGGCACAGAGCGTGCACATCTGCTCGCATGCTGGCTTGTGGCAGGGCTGAGGGGCTGTGACAGCCCCATATGGCCCACAAAGCTGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562593.5
CDS CCA 90 bp ATTTGGAAACTTGTGGCCATGTCCCTTGGAACCAAGGCCAGGAAGTaGATGGAGCAGGACGCCTGGGCAGGCGTGGCCAGGAGACTTACC +
Preference number: 5 (lower is better)
Translates to: IWKLVAMSLGTKARK*MEQDAWAGVARRLT
Trigger: GGTAAGTCTCCTGGCCACGCCTGCCCAGGCGTCCTGCTCCATCCACTTCCTGGCCTTGGTTCCAAGGGACATGGCCACAAGTTTCCAAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567779.1
CDS-3UTR CAA 90 bp GTTGGGGGATCCAAACCACTCATCAAATCCGTGCTTCAGGGGGTGGAACTGGGGCCTTCCTCCAGGCACTaGCAGGGCCAACCGGAGATT +
Preference number: 5 (lower is better)
Translates to: VGGSKPLIKSVLQGVELGPSSRH*QGQPEI
Trigger: AATCTCCGGTTGGCCCTGCAAGTGCCTGGAGGAAGG...CCCCAGTTCCACCCCCTGAAGCACGGATTTGATGAGTGGTTTGGATCCCCCAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000568613.5
CDS TCA 90 bp ATGGGTAGCCGTCCTGTGAGCAGTGCCGCCCTCGCTATGTGGAGGTaGCAGAAACAGAAACTGGATAAGAAGGGTGTGGCTCAGACCCCG +
Preference number: 5 (lower is better)
Translates to: MGSRPVSSAALAMWR*QKQKLDKKGVAQTP
Trigger: CGGGGTCTGAGCCACACCCTTCTTATCCAGTTTCTGTTTCTGTCACCTCCACATAGCGAGGGCGGCACTGCTCACAGGACGGCTACCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562593.5
ENST00000567779.1
CDS-3UTR CAA 90 bp ACCACTCATCAAATCCGTGCTTCAGGGGGTGGAACTGGGGCCTGTGACCCAGATCGCGACGTGCAGGTCTaGGAGGAGCTCCAGTATCTT +
Preference number: 5 (lower is better)
Translates to: TTHQIRASGGGTGACDPDRDVQV*EELQYL
Trigger: AAGATACTGGAGCTCCTCCAAGACCTGCACGTCGCG...ATCTGGGTCACAGGCCCCAGTTCCACCCCCTGAAGCACGGATTTGATGAGTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568613.5
CDS-3UTR CAA 90 bp GTGGAAGATCAGGGGCAGCTTCGTGTGGTCTTCCAGATTGTGAGTTGTGACCCCATGAGGGCAGCGCCGTaGTCCGACGTGAAGAAGACG +
Preference number: 5 (lower is better)
Translates to: VEDQGQLRVVFQIVSCDPMRAAP*SDVKKT
Trigger: CGTCTTCTTCACGTCGGACAACGGCGCTGCCCTCAT...GGGGTCACAACTCACAATCTGGAAGACCACACGAAGCTGCCCCTGATCTTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
CDS GCA 90 bp CCTGCACAGGGACGCTGGAGACACCTGAACACACCCAGAATCAGCTaGCGTTTCCCACCCAAGACACCCTCCTCATTTGGAAACTTGTGG +
Preference number: 5 (lower is better)
Translates to: PAQGRWRHLNTPRIS*RFPPKTPSSFGNLW
Trigger: CCACAAGTTTCCAAATGAGGAGGGTGTCTTGGGTGGGAAACGGCAGCTGATTCTGGGTGTGTTCAGGTGTCTCCAGCGTCCCTGTGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567779.1
CDS CCA 90 bp TTGTGGTTTAGACCAGAGCTTTCACCATCCAACAGGCCCCTAGGGTaGACAGGCAGCTCCTCCGCCACAGCTCCTGTGTGTAATGACGTG +
Preference number: 5 (lower is better)
Translates to: LWFRPELSPSNRPLG*TGSSSATAPVCNDV
Trigger: CACGTCATTACACACAGGAGCTGTGGCGGAGGAGCTGCCTGTCCACCCTAGGGGCCTGTTGGATGGTGAAAGCTCTGGTCTAAACCACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565364.1
CDS CCA 90 bp AGCTGCCGTTTCCCACCCAAGACACCCTCCTCATTTGGAAACTTGTaGCCATGTCCCTTGGAACCAAGGCCAGGAAGTGGATGGAGCAGG +
Preference number: 5 (lower is better)
Translates to: SCRFPPKTPSSFGNL*PCPLEPRPGSGWSR
Trigger: CCTGCTCCATCCACTTCCTGGCCTTGGTTCCAAGGGACATGGCCACAAGTTTCCAAATGAGGAGGGTGTCTTGGGTGGGAAACGGCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567779.1
CDS-3UTR CAA 90 bp GTTGGGGGATCCAAACCACTCATCAAATCCGTGCTTCAGGGGGTGGAACTGGGGCTGTACACAGGGATGTaGGGCCTGGCCTTGTTGTCA +
Preference number: 5 (lower is better)
Translates to: VGGSKPLIKSVLQGVELGLYTGM*GLALLS
Trigger: TGACAACAAGGCCAGGCCCAACATCCCTGTGTACAG...CCCCAGTTCCACCCCCTGAAGCACGGATTTGATGAGTGGTTTGGATCCCCCAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000568613.5
CDS-3UTR CAA 90 bp CATCAGCGTGTCGCCACGGTAATAGAAGATAGGCCTGTCCATCAGCCGGCCCTGGACCAGAGGCACTTCTaGGGAATGGATTCTGGAGGT +
Preference number: 5 (lower is better)
Translates to: HQRVATVIEDRPVHQPALDQRHF*GMDSGG
Trigger: ACCTCCAGAATCCATTCCCAAGAAGTGCCTCTGGTC...CAGGGCCGGCTGATGGACAGGCCTATCTTCTATTACCGTGGCGACACGCTGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
CDS GCA 90 bp ATGAGATGGCTTCTAGGCACGGCCGTGGGCGGGTCTCACGTCAGTTaGGTGTCGTCTGAGGAAAGTTCTTCTGCAGCTACGGCTTTGAAA +
Preference number: 5 (lower is better)
Translates to: MRWLLGTAVGGSHVS*VSSEESSSAATALK
Trigger: TTTCAAAGCCGTAGCTGCAGAAGAACTTTCCTCAGACGACACGCAACTGACGTGAGACCCGCCCACGGCCGTGCCTAGAAGCCATCTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561812.1
CDS-3UTR CAA 90 bp GGACAAAGGACAGACGGAACTGGAAGTCATCCCTCTGGGGCTCCCCTGAGACAAGTCCAGGGAAATTCCTaGTGGACAAAGGACAGACGG +
Preference number: 5 (lower is better)
Translates to: GQRTDGTGSHPSGAPLRQVQGNS*WTKDRR
Trigger: CCGTCTGTCCTTTGTCCACAAGGAATTTCCCTGGAC...TTGTCTCAGGGGAGCCCCAGAGGGATGACTTCCAGTTCCGTCTGTCCTTTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
CDS GCA 90 bp TGTCCCCCAGAAGCCCAGTTATCGTGTGACCCTGCAGTTCCACGCTaGAACTCCACTCCTAGCTGTACACCCAAGAGACTGAAACTTACG +
Preference number: 5 (lower is better)
Translates to: CPPEAQLSCDPAVPR*NSTPSCTPKRLKLT
Trigger: CGTAAGTTTCAGTCTCTTGGGTGTACAGCTAGGAGTGGAGTTGCAGCGTGGAACTGCAGGGTCACACGATAACTGGGCTTCTGGGGGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562593.5
CDS CCA 90 bp GAGGGCCTGCTGATGAGTACCGGTTTCTTCTTGGGATGGACTGTTTaGAAGCAGGTAGAAGGGATGGAGGCACCACGCTGTGAATGGACT +
Preference number: 5 (lower is better)
Translates to: EGLLMSTGFFLGWTV*KQVEGMEAPRCEWT
Trigger: AGTCCATTCACAGCGTGGTGCCTCCATCCCTTCTACCTGCTTCCAAACAGTCCATCCCAAGAAGAAACCGGTACTCATCAGCAGGCCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562593.5
CDS-3UTR CAA 90 bp GGTGCTAGTGGGACCAGAGGCACTTCTTGGGAATGGATTCTGGAGGTGTCAGACGACCAGAGGCACTTCTaGGGAATGGATTCTGGAGGT +
Preference number: 5 (lower is better)
Translates to: GASGTRGTSWEWILEVSDDQRHF*GMDSGG
Trigger: ACCTCCAGAATCCATTCCCAAGAAGTGCCTCTGGTC...GTCTGACACCTCCAGAATCCATTCCCAAGAAGTGCCTCTGGTCCCACTAGCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
CDS-3UTR CAA 90 bp AGTCCCTGTACACAGGGATGTTGGGCCTGGCCTTGTTGTCATAAGGTCCAAAGTCGCCTCCACTTCTGCTaGGTCTTCAGGTGGGGAATG +
Preference number: 5 (lower is better)
Translates to: SPCTQGCWAWPCCHKVQSRLHFC*VFRWGM
Trigger: CATTCCCCACCTGAAGACCAAGCAGAAGTGGAGGCG...ACTTTGGACCTTATGACAACAAGGCCAGGCCCAACATCCCTGTGTACAGGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568613.5
CDS TCA 90 bp TCAGTTGCGTGTCGTCTGAGGAAAGTTCTTCTGCAGCTACGGCTTTaGAAGCAGCATCCCCGACGCAGATTTCCCCGAGGCAGATTTCAC +
Preference number: 5 (lower is better)
Translates to: SVACRLRKVLLQLRL*KQHPRRRFPRGRFH
Trigger: GTGAAATCTGCCTCGGGGAAATCTGCGTCGGGGATGCTGCTTTCAAAGCCGTAGCTGCAGAAGAACTTTCCTCAGACGACACGCAACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561812.1
CDS-3UTR CAA 90 bp GCGTCCAGGGAAATTCCTTGTGGACAAAGGACAGACGGAACTGGAAGTCATCCCGACCAGAGGCACTTCTaGGGAATGGATTCTGGAGGT +
Preference number: 5 (lower is better)
Translates to: ASREIPCGQRTDGTGSHPDQRHF*GMDSGG
Trigger: ACCTCCAGAATCCATTCCCAAGAAGTGCCTCTGGTC...GGGATGACTTCCAGTTCCGTCTGTCCTTTGTCCACAAGGAATTTCCCTGGACGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
CDS-3UTR CAA 90 bp ATTAGCGTCCAGGGAAATTCCTTGTGGACAAAGGACAGACGGAACTGGAAGTCACCTTCCTCCAGGCACTaGCAGGGCCAACCGGAGATT +
Preference number: 5 (lower is better)
Translates to: ISVQGNSLWTKDRRNWKSPSSRH*QGQPEI
Trigger: AATCTCCGGTTGGCCCTGCAAGTGCCTGGAGGAAGG...TGACTTCCAGTTCCGTCTGTCCTTTGTCCACAAGGAATTTCCCTGGACGCTAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
CDS TCA 90 bp TGTGATGGCACCAGCACAGCAAATGCCCACGGCAAACTCCGGAGGTaGGTGGCAGCGGCGGTGTTCACTGAAAACTTCTTCAAATTTTAC +
Preference number: 5 (lower is better)
Translates to: CDGTSTANAHGKLRR*VAAAVFTENFFKFY
Trigger: GTAAAATTTGAAGAAGTTTTCAGTGAACACCGCCGCTGCCACTCACCTCCGGAGTTTGCCGTGGGCATTTGCTGTGCTGGTGCCATCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562593.5
CDS-3UTR CAA 90 bp CCGTTCCCTTACTGTTTACATAAAAATGCGGATTCACTGGGCCAGACTCAATCGATGAGGGCAGCGCCGTaGTCCGACGTGAAGAAGACG +
Preference number: 5 (lower is better)
Translates to: PFPYCLHKNADSLGQTQSMRAAP*SDVKKT
Trigger: CGTCTTCTTCACGTCGGACAACGGCGCTGCCCTCAT...CGATTGAGTCTGGCCCAGTGAATCCGCATTTTTATGTAAACAGTAAGGGAACGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
CDS-3UTR CAA 90 bp AGAGGCACTTCTTGGGAATGGATTCTGGAGGTGTCAGACACTTCCCTAACTTTTATGAGGGCAGCGCCGTaGTCCGACGTGAAGAAGACG +
Preference number: 5 (lower is better)
Translates to: RGTSWEWILEVSDTSLTFMRAAP*SDVKKT
Trigger: CGTCTTCTTCACGTCGGACAACGGCGCTGCCCTCAT...AAAAGTTAGGGAAGTGTCTGACACCTCCAGAATCCATTCCCAAGAAGTGCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
CDS CCA 90 bp TACAGGCCGCCTTCAGCAGCTTCGGCAGCACAAACACACAACACCTaGGAAAGACAACACATTCTAAACACAACGACCAAGTTCACAGGC +
Preference number: 5 (lower is better)
Translates to: YRPPSAASAAQTHNT*ERQHILNTTTKFTG
Trigger: GCCTGTGAACTTGGTCGTTGTGTTTAGAATGTGTTGTCTTTCCCAGGTGTTGTGTGTTTGTGCTGCCGAAGCTGCTGAAGGCGGCCTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562593.5
CDS-3UTR CAA 90 bp AGAGGCACTTCTTGGGAATGGATTCTGGAGGTGTCAGACACTTCCCTAACTTTTAAGAAGACGAAGGTGTaGTCCGCGACGTGCAGGTCT +
Preference number: 5 (lower is better)
Translates to: RGTSWEWILEVSDTSLTFKKTKV*SATCRS
Trigger: AGACCTGCACGTCGCGGACAACACCTTCGTCTTCTT...AAAAGTTAGGGAAGTGTCTGACACCTCCAGAATCCATTCCCAAGAAGTGCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567525.5
ENST00000568613.5
CDS TCA 90 bp AAGACAACACATTCTAAACACAACGACCAAGTTCACAGGCCCAGCTaGATTCAACCACCACGTTCACAGGCCCAGCTGCATTCAACGCAT +
Preference number: 5 (lower is better)
Translates to: KTTHSKHNDQVHRPS*IQPPRSQAQLHSTH
Trigger: ATGCGTTGAATGCAGCTGGGCCTGTGAACGTGGTGGTTGAATTCAGCTGGGCCTGTGAACTTGGTCGTTGTGTTTAGAATGTGTTGTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562593.5
CDS CCA 90 bp ATCAGCTCAGGATTTCATCAACTGCTAGGCTGTTACTCTCCTTCCTaGTGGCTTCTTTGTGGTTTAGACCAGAGCTTTCACCATCCAACA +
Preference number: 5 (lower is better)
Translates to: ISSGFHQLLGCYSPS*WLLCGLDQSFHHPT
Trigger: TGTTGGATGGTGAAAGCTCTGGTCTAAACCACAAAGAAGCCACCAGGAAGGAGAGTAACAGCCTAGCAGTTGATGAAATCCTGAGCTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565364.1
CDS-3UTR CAA 90 bp ATACTGATCTTGTGTCTCCCTAAGATGTATAAAGGCAAACTGTATCCCCAGCCAGTCCAGGGAAATTCCTaGTGGACAAAGGACAGACGG +
Preference number: 5 (lower is better)
Translates to: ILILCLPKMYKGKLYPQPVQGNS*WTKDRR
Trigger: CCGTCTGTCCTTTGTCCACAAGGAATTTCCCTGGAC...TGGCTGGGGATACAGTTTGCCTTTATACATCTTAGGGAGACACAAGATCAGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268695.10
ENST00000567525.5
CDS CCA 72 bp GCTGCCACCACCTCGTCGCCGCGACAACCGCCGCCATaGCAACCACGGGAGCCGCGGAGCCCCGGCCAGCGA +
Preference number: 6 (lower is better)
Translates to: AATTSSPRQPPP*QPREPRSPGQR
Trigger: TCGCTGGCCGGGGCTCCGCGGCTCCCGTGGTTGCCATGGCGGCGGTTGTCGCGGCGACGAGGTGGTGGCAGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268695.10
ENST00000568311.1
ENST00000569433.1
CDS TCA 72 bp TGTCCCGGTCATGCAGCACAGTGGCAGCGCGTGTGGTaGTCGGTGACCGCCGAGACCCCACGCCTGGACCCC +
Preference number: 6 (lower is better)
Translates to: CPGHAAQWQRVW*SVTAETPRLDP
Trigger: GGGGTCCAGGCGTGGGGTCTCGGCGGTCACCGATCACCACACGCGCTGCCACTGTGCTGCATGACCGGGACA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562831.1
CDS GCA 72 bp CCGCCCTCGCTGCCAGGGAGGACGCTGTCCCGGTCATaGAGCACAGTGGCAGCGCGTGTGGTGATCGGTGAC +
Preference number: 6 (lower is better)
Translates to: PPSLPGRTLSRS*STVAARVVIGD
Trigger: GTCACCGATCACCACACGCGCTGCCACTGTGCTGCATGACCGGGACAGCGTCCTCCCTGGCAGCGAGGGCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562831.1
CDS CAA 90 bp CTGTGCCCACTCGCCCTGGCCCCCAGGCCAGCTGTCCGGGTTTCCTaGCGCAGCCTGTCCTGTCCTGGAACGAATCCAGCTTGCGGCTGC +
Preference number: 6 (lower is better)
Translates to: LCPLALAPRPAVRVS*RSLSCPGTNPACGC
Trigger: GCAGCCGCAAGCTGGATTCGTTCCAGGACAGGACAGGCTGCGCAAGGAAACCCGGACAGCTGGCCTGGGGGCCAGGGCGAGTGGGCACAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561812.1
CDS TCA 72 bp CTCCACCACCTGGGTGGGGCACGGCACCCATTCCACTaGAAGACGCGTGGCCCTTGGGCCCTGCAGCTCAGC +
Preference number: 6 (lower is better)
Translates to: LHHLGGARHPFH*KTRGPWALQLS
Trigger: GCTGAGCTGCAGGGCCCAAGGGCCACGCGTCTTTCAGTGGAATGGGTGCCGTGCCCCACCCAGGTGGTGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562593.5
CDS GCA 72 bp TGGCACCTAATCTCATCCTCCGGCCCACAGCAGCCCTaGAGGCCACACCTCTGTGCCCACTCGCCCTGGCCC +
Preference number: 6 (lower is better)
Translates to: WHLISSSGPQQP*RPHLCAHSPWP
Trigger: GGGCCAGGGCGAGTGGGCACAGAGGTGTGGCCTGCAGGGCTGCTGTGGGCCGGAGGATGAGATTAGGTGCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561812.1
CDS TCA 72 bp GAGGGAGGGAGTGGGACTCCTGCTTCCCAGGTACCCTaGGACGGAGCCACACTGCAGCACCTCTCCCCAGGC +
Preference number: 6 (lower is better)
Translates to: EGGSGTPASQVP*DGATLQHLSPG
Trigger: GCCTGGGGAGAGGTGCTGCAGTGTGGCTCCGTCTCAGGGTACCTGGGAAGCAGGAGTCCCACTCCCTCCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562593.5
CDS GCA 72 bp CTCCTGCTTCCCAGGTACCCTGAGACGGAGCCACACTaGAGCACCTCTCCCCAGGCGGCCACAGCACTCGAC +
Preference number: 6 (lower is better)
Translates to: LLLPRYPETEPH*STSPQAATALD
Trigger: GTCGAGTGCTGTGGCCGCCTGGGGAGAGGTGCTGCAGTGTGGCTCCGTCTCAGGGTACCTGGGAAGCAGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562593.5
CDS CCA 72 bp GCAGCTCCTCCGCCACAGCTCCTGTGTGTAATGACGTaGCCCCTCCAAGGACGACGTGGCAGGAGGCAGCCG +
Preference number: 6 (lower is better)
Translates to: AAPPPQLLCVMT*PLQGRRGRRQP
Trigger: CGGCTGCCTCCTGCCACGTCGTCCTTGGAGGGGCCACGTCATTACACACAGGAGCTGTGGCGGAGGAGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565364.1
CDS CAA 72 bp GAAAGACGCGTGGCCCTTGGGCCCTGCAGCTCAGCGTaGTCCCCAAGACCCCGCCTCCTTTCGCAGGCTCCT +
Preference number: 6 (lower is better)
Translates to: ERRVALGPCSSA*SPRPRLLSQAP
Trigger: AGGAGCCTGCGAAAGGAGGCGGGGTCTTGGGGACAACGCTGAGCTGCAGGGCCCAAGGGCCACGCGTCTTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562593.5
CDS CAA 72 bp GGCACGGCACCCATTCCACTGAAAGACGCGTGGCCCTaGGGCCCTGCAGCTCAGCGTTGTCCCCAAGACCCC +
Preference number: 6 (lower is better)
Translates to: GTAPIPLKDAWP*GPAAQRCPQDP
Trigger: GGGGTCTTGGGGACAACGCTGAGCTGCAGGGCCCAAGGGCCACGCGTCTTTCAGTGGAATGGGTGCCGTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562593.5
CDS TCA 72 bp TGGTGTAGAAGCCATTGCGGATGGGTAGCCGTCCTGTaGGCAGTGCCGCCCTCGCTGCCAGGGAGGACGCTG +
Preference number: 6 (lower is better)
Translates to: WCRSHCGWVAVL*AVPPSLPGRTL
Trigger: CAGCGTCCTCCCTGGCAGCGAGGGCGGCACTGCTCACAGGACGGCTACCCATCCGCAATGGCTTCTACACCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562831.1
CDS GCA 72 bp TCGCCCTGGCCCCCAGGCCAGCTGTCCGGGTTTCCTTaGGCAGCCTGTCCTGTCCTGGAACGAATCCAGCTT +
Preference number: 6 (lower is better)
Translates to: SPWPPGQLSGFP*AACPVLERIQL
Trigger: AAGCTGGATTCGTTCCAGGACAGGACAGGCTGCGCAAGGAAACCCGGACAGCTGGCCTGGGGGCCAGGGCGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561812.1
CDS GCA 72 bp CCTGAAACACATGGCAGCAACACGGTCAGGGCACTCTaGACCGACCCGATGGGGCTGGGGGCCAATCCCTGG +
Preference number: 6 (lower is better)
Translates to: PETHGSNTVRAL*TDPMGLGANPW
Trigger: CCAGGGATTGGCCCCCAGCCCCATCGGGTCGGTGCAGAGTGCCCTGACCGTGTTGCTGCCATGTGTTTCAGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564263.1
CDS CCA 72 bp TCTAGAAGGAGAAGGGGAGGGCACCGCCTGGGGCTTTaGCTCTCCTCGGATCCTCCAGCCGTCTCCCTGAGC +
Preference number: 6 (lower is better)
Translates to: SRRRRGGHRLGL*LSSDPPAVSLS
Trigger: GCTCAGGGAGACGGCTGGAGGATCCGAGGAGAGCCAAAGCCCCAGGCGGTGCCCTCCCCTTCTCCTTCTAGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562593.5
CDS CCA 72 bp AGGAGGAATGAGCGCCTTCTGCAGGTGCTTCTGGCCTaGGGAGCTGCCCATGGTGCCAAGAGCGTGTCGGGG +
Preference number: 6 (lower is better)
Translates to: RRNERLLQVLLA*GAAHGAKSVSG
Trigger: CCCCGACACGCTCTTGGCACCATGGGCAGCTCCCCAGGCCAGAAGCACCTGCAGAAGGCGCTCATTCCTCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562593.5
CDS CCA 72 bp CGGGGAGGAGGAATGAGCGCCTTCTGCAGGTGCTTCTaGCCTGGGGAGCTGCCCATGGTGCCAAGAGCGTGT +
Preference number: 6 (lower is better)
Translates to: RGGGMSAFCRCF*PGELPMVPRAC
Trigger: ACACGCTCTTGGCACCATGGGCAGCTCCCCAGGCCAGAAGCACCTGCAGAAGGCGCTCATTCCTCCTCCCCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562593.5
CDS GCA 72 bp AGGAGCACCCTGAGCGCCCATCGGCAGACGACAAAGTaGGGCCGGCGTGTACTACGTGGGTGTGGCCACATT +
Preference number: 6 (lower is better)
Translates to: RSTLSAHRQTTK*GRRVLRGCGHI
Trigger: AATGTGGCCACACCCACGTAGTACACGCCGGCCGCACTTTGTCGTCTGCCGATGGGCGCTCAGGGTGCTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562593.5
CDS GCA 72 bp AGAGCACGGGGAGGAGGAATGAGCGCCTTCTGCAGGTaGTTCTGGCCTGGGGAGCTGCCCATGGTGCCAAGA +
Preference number: 6 (lower is better)
Translates to: RARGGGMSAFCR*FWPGELPMVPR
Trigger: TCTTGGCACCATGGGCAGCTCCCCAGGCCAGAAGCACCTGCAGAAGGCGCTCATTCCTCCTCCCCGTGCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562593.5
CDS CCA 72 bp CTTGCGGCTGCTCTTCAGAACGGGCTGCAGGAGAGGTaGTATGAGATGGCTTCTAGGCACGGCCGTGGGCGG +
Preference number: 6 (lower is better)
Translates to: LAAALQNGLQER*YEMASRHGRGR
Trigger: CCGCCCACGGCCGTGCCTAGAAGCCATCTCATACCACCTCTCCTGCAGCCCGTTCTGAAGAGCAGCCGCAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561812.1
CDS CCA 72 bp GCCTGTCAATCCCCGTTAGCGTCTCCACCACCTGGGTaGGGCACGGCACCCATTCCACTGAAAGACGCGTGG +
Preference number: 6 (lower is better)
Translates to: ACQSPLASPPPG*GTAPIPLKDAW
Trigger: CCACGCGTCTTTCAGTGGAATGGGTGCCGTGCCCCACCCAGGTGGTGGAGACGCTAACGGGGATTGACAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562593.5
CDS CCA 72 bp CCGGCTACTGCTGTCAGGACACGGACCCCTGGGCGCTaGAGAGCGTGCTCTGGAAAGCAGTCACTTCGCTCA +
Preference number: 6 (lower is better)
Translates to: PATAVRTRTPGR*RACSGKQSLRS
Trigger: TGAGCGAAGTGACTGCTTTCCAGAGCACGCTCTCCAGCGCCCAGGGGTCCGTGTCCTGACAGCAGTAGCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568311.1
CDS CCA 72 bp GAAAGGCCCGGCTACTGCTGTCAGGACACGGACCCCTaGGCGCTGGAGAGCGTGCTCTGGAAAGCAGTCACT +
Preference number: 6 (lower is better)
Translates to: ERPGYCCQDTDP*ALESVLWKAVT
Trigger: AGTGACTGCTTTCCAGAGCACGCTCTCCAGCGCCCAGGGGTCCGTGTCCTGACAGCAGTAGCCGGGCCTTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568311.1
CDS CAA 90 bp GCCGCTCCACGGTCAGCCCACGCTGTCTTTCGCCTCCACTTCTGCTaGGTCTTCAGGTGGGGAATGTGTCCGTCTGCCTCCTCCCAGCCT +
Preference number: 6 (lower is better)
Translates to: AAPRSAHAVFRLHFC*VFRWGMCPSASSQP
Trigger: AGGCTGGGAGGAGGCAGACGGACACATTCCCCACCTGAAGACCAAGCAGAAGTGGAGGCGAAAGACAGCGTGGGCTGACCGTGGAGCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562593.5
ENST00000565364.1
ENST00000568613.5
CDS TCA 72 bp TGGTGTAGAAGCCATTGCGGATGGGTAGCCGTCCTGTaGGCAGTGCCGCCCTCGGTCGTCCATGAGCAGGAG +
Preference number: 6 (lower is better)
Translates to: WCRSHCGWVAVL*AVPPSVVHEQE
Trigger: CTCCTGCTCATGGACGACCGAGGGCGGCACTGCTCACAGGACGGCTACCCATCCGCAATGGCTTCTACACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567525.5
CDS GCA 72 bp CGTGACAGACGAGGCACGCGCAGGTTTACAAGGGGCTaGCACGCCTGTCAATCCCCGTTAGCGTCTCCACCA +
Preference number: 6 (lower is better)
Translates to: RDRRGTRRFTRG*HACQSPLASPP
Trigger: TGGTGGAGACGCTAACGGGGATTGACAGGCGTGGCAGCCCCTTGTAAACCTGCGCGTGCCTCGTCTGTCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562593.5
CDS GCA 72 bp GCTGTCAGGACACGGACCCCTGGGCGCTGGAGAGCGTaGTCTGGAAAGCAGTCACTTCGCTCAGCATTCTCC +
Preference number: 6 (lower is better)
Translates to: AVRTRTPGRWRA*SGKQSLRSAFS
Trigger: GGAGAATGCTGAGCGAAGTGACTGCTTTCCAGAGCACGCTCTCCAGCGCCCAGGGGTCCGTGTCCTGACAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568311.1
CDS CCA 72 bp CTCTTCAGAACGGGCTGCAGGAGAGGTGGTATGAGATaGCTTCTAGGCACGGCCGTGGGCGGGTCTCACGTC +
Preference number: 6 (lower is better)
Translates to: LFRTGCRRGGMR*LLGTAVGGSHV
Trigger: GACGTGAGACCCGCCCACGGCCGTGCCTAGAAGCCATCTCATACCACCTCTCCTGCAGCCCGTTCTGAAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561812.1
CDS CCA 72 bp GACTTTGCTCTAGAAGGAGAAGGGGAGGGCACCGCCTaGGGCTTTGGCTCTCCTCGGATCCTCCAGCCGTCT +
Preference number: 6 (lower is better)
Translates to: DFALEGEGEGTA*GFGSPRILQPS
Trigger: AGACGGCTGGAGGATCCGAGGAGAGCCAAAGCCCCAGGCGGTGCCCTCCCCTTCTCCTTCTAGAGCAAAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562593.5
CDS CCA 72 bp TCGACCCTGAAAACCCAGCAGGTGCCGCACCCCACATaGCACGGAGCCGGGCTGGGATTTGATGAGAAAGGC +
Preference number: 6 (lower is better)
Translates to: STLKTQQVPHPT*HGAGLGFDEKG
Trigger: GCCTTTCTCATCAAATCCCAGCCCGGCTCCGTGCCATGTGGGGTGCGGCACCTGCTGGGTTTTCAGGGTCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562593.5
CDS CCA 72 bp CTGCTGGCAAGGTCACGCTGGCCTGCACAGGGACGCTaGAGACACCTGAACACACCCAGAATCAGCTGCCGT +
Preference number: 6 (lower is better)
Translates to: LLARSRWPAQGR*RHLNTPRISCR
Trigger: ACGGCAGCTGATTCTGGGTGTGTTCAGGTGTCTCCAGCGTCCCTGTGCAGGCCAGCGTGACCTTGCCAGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567779.1
CDS CCA 72 bp CAGGACACGGACCCCTGGGCGCTGGAGAGCGTGCTCTaGAAAGCAGTCACTTCGCTCAGCATTCTCCAGAGG +
Preference number: 6 (lower is better)
Translates to: QDTDPWALESVL*KAVTSLSILQR
Trigger: CCTCTGGAGAATGCTGAGCGAAGTGACTGCTTTCCAGAGCACGCTCTCCAGCGCCCAGGGGTCCGTGTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568311.1
CDS TCA 72 bp CTCCTGAGGTGCTCCAAGCACCAACCAAGACACCAGTaGAGTGACTGTGCCTGCCTGGGCCCCTGCCCTCTA +
Preference number: 6 (lower is better)
Translates to: LLRCSKHQPRHQ*SDCACLGPCPL
Trigger: TAGAGGGCAGGGGCCCAGGCAGGCACAGTCACTTCACTGGTGTCTTGGTTGGTGCTTGGAGCACCTCAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562593.5
CDS GCA 72 bp TTGCGCAGCCTGTCCTGTCCTGGAACGAATCCAGCTTaGGGCTGCTCTTCAGAACGGGCTGCAGGAGAGGTG +
Preference number: 6 (lower is better)
Translates to: LRSLSCPGTNPA*GCSSERAAGEV
Trigger: CACCTCTCCTGCAGCCCGTTCTGAAGAGCAGCCGCAAGCTGGATTCGTTCCAGGACAGGACAGGCTGCGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561812.1
CDS GCA 72 bp CCACGGTCAGCCCACGCTGTCTTTCGCCTCCACTTCTaGTTGGTCTTCAGGTGGGGAATGTGTCCGTCTGCC +
Preference number: 6 (lower is better)
Translates to: PRSAHAVFRLHF*LVFRWGMCPSA
Trigger: GGCAGACGGACACATTCCCCACCTGAAGACCAAGCAGAAGTGGAGGCGAAAGACAGCGTGGGCTGACCGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562593.5
ENST00000565364.1
ENST00000568613.5
CDS CAA 72 bp CTTGCGCAGCCTGTCCTGTCCTGGAACGAATCCAGCTaGCGGCTGCTCTTCAGAACGGGCTGCAGGAGAGGT +
Preference number: 6 (lower is better)
Translates to: LAQPVLSWNESS*RLLFRTGCRRG
Trigger: ACCTCTCCTGCAGCCCGTTCTGAAGAGCAGCCGCAAGCTGGATTCGTTCCAGGACAGGACAGGCTGCGCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561812.1
CDS CAA 72 bp CGGTCAGCCCACGCTGTCTTTCGCCTCCACTTCTGCTaGGTCTTCAGGTGGGGAATGTGTCCGTCTGCCTCC +
Preference number: 6 (lower is better)
Translates to: RSAHAVFRLHFC*VFRWGMCPSAS
Trigger: GGAGGCAGACGGACACATTCCCCACCTGAAGACCAAGCAGAAGTGGAGGCGAAAGACAGCGTGGGCTGACCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562593.5
ENST00000565364.1
ENST00000568613.5
CDS CAA 90 bp CCGGGTTTCCTTGCGCAGCCTGTCCTGTCCTGGAACGAATCCAGCTaGCGGCTGCTCTTCAGAACGGGCTGCAGGAGAGGTGGTATGAGA +
Preference number: 6 (lower is better)
Translates to: PGFLAQPVLSWNESS*RLLFRTGCRRGGMR
Trigger: TCTCATACCACCTCTCCTGCAGCCCGTTCTGAAGAGCAGCCGCAAGCTGGATTCGTTCCAGGACAGGACAGGCTGCGCAAGGAAACCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561812.1
CDS TCA 72 bp GAACAGCAGCCACCAACAATACCGCAACTTCGACCCTaGAAACCCAGCAGGTGCCGCACCCCACATGGCACG +
Preference number: 6 (lower is better)
Translates to: EQQPPTIPQLRP*KPSRCRTPHGT
Trigger: CGTGCCATGTGGGGTGCGGCACCTGCTGGGTTTTCAGGGTCGAAGTTGCGGTATTGTTGGTGGCTGCTGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562593.5
CDS TCA 72 bp TGGTGTAGAAGCCATTGCGGATGGGTAGCCGTCCTGTaGGCAGTGCCGCCCTCGCTATGTGGAGGTGACAGA +
Preference number: 6 (lower is better)
Translates to: WCRSHCGWVAVL*AVPPSLCGGDR
Trigger: TCTGTCACCTCCACATAGCGAGGGCGGCACTGCTCACAGGACGGCTACCCATCCGCAATGGCTTCTACACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562593.5
ENST00000567779.1
CDS TCA 72 bp AGGGACGCTGGAGACACCACTTGCCGACAATCTTGCTaGCGTAGCCGGCCTTCTTCAGAAGCTCCGGCAGGA +
Preference number: 6 (lower is better)
Translates to: RDAGDTTCRQSC*RSRPSSEAPAG
Trigger: TCCTGCCGGAGCTTCTGAAGAAGGCCGGCTACGTCAGCAAGATTGTCGGCAAGTGGTGTCTCCAGCGTCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565364.1
CDS GCA 72 bp CTTCTAGGCACGGCCGTGGGCGGGTCTCACGTCAGTTaGGTGTCGTCTGAGGAAAGTTCTTCTGCAGCTACG +
Preference number: 6 (lower is better)
Translates to: LLGTAVGGSHVS*VSSEESSSAAT
Trigger: CGTAGCTGCAGAAGAACTTTCCTCAGACGACACGCAACTGACGTGAGACCCGCCCACGGCCGTGCCTAGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561812.1
CDS CCA 72 bp AGCTGTCCGGGTTTCCTTGCGCAGCCTGTCCTGTCCTaGAACGAATCCAGCTTGCGGCTGCTCTTCAGAACG +
Preference number: 6 (lower is better)
Translates to: SCPGFLAQPVLS*NESSLRLLFRT
Trigger: CGTTCTGAAGAGCAGCCGCAAGCTGGATTCGTTCCAGGACAGGACAGGCTGCGCAAGGAAACCCGGACAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561812.1
CDS CCA 72 bp TCGGCAGACGACAAAGTGCGGCCGGCGTGTACTACGTaGGTGTGGCCACATTTGGAAGTAGGGTCTCTGCAG +
Preference number: 6 (lower is better)
Translates to: SADDKVRPACTT*VWPHLEVGSLQ
Trigger: CTGCAGAGACCCTACTTCCAAATGTGGCCACACCCACGTAGTACACGCCGGCCGCACTTTGTCGTCTGCCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562593.5
CDS CCA 72 bp GGTCAGCCCACGCTGTCTTTCGCCTCCACTTCTGCTTaGTCTTCAGGTGGGGAATGTGTCCGTCTGCCTCCT +
Preference number: 6 (lower is better)
Translates to: GQPTLSFASTSA*SSGGECVRLPP
Trigger: AGGAGGCAGACGGACACATTCCCCACCTGAAGACCAAGCAGAAGTGGAGGCGAAAGACAGCGTGGGCTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562593.5
ENST00000565364.1
ENST00000568613.5
CDS CCA 72 bp CAGCACCTCTCCCCAGGCGGCCACAGCACTCGACTCTaGGAAACAGAACAGCAGCCACCAACAATACCGCAA +
Preference number: 6 (lower is better)
Translates to: QHLSPGGHSTRL*ETEQQPPTIPQ
Trigger: TTGCGGTATTGTTGGTGGCTGCTGTTCTGTTTCCCAGAGTCGAGTGCTGTGGCCGCCTGGGGAGAGGTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562593.5
CDS CAA 90 bp GGGGTGGGTGCTGGGGAGGGCCTGCTGATGAGTACCGGTTTCTTCTaGGGATGGACTGTTTGGAAGCAGGTAGAAGGGATGGAGGCACCA +
Preference number: 6 (lower is better)
Translates to: GVGAGEGLLMSTGFF*GWTVWKQVEGMEAP
Trigger: TGGTGCCTCCATCCCTTCTACCTGCTTCCAAACAGTCCATCCCAAGAAGAAACCGGTACTCATCAGCAGGCCCTCCCCAGCACCCACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562593.5
CDS CAA 90 bp TTCCTGGAGAGCCTGAGGGGGAGGGGCCCGGCTGACACCTTGATTTaGCACTTCTGGCCTCCAGAATCCGGCAAGAATCCATTTCCGCTA +
Preference number: 6 (lower is better)
Translates to: FLESLRGRGPADTLI*HFWPPESGKNPFPL
Trigger: TAGCGGAAATGGATTCTTGCCGGATTCTGGAGGCCAGAAGTGCAAAATCAAGGTGTCAGCCGGGCCCCTCCCCCTCAGGCTCTCCAGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562593.5
CDS TCA 72 bp GGCCGTGGGCGGGTCTCACGTCAGTTGCGTGTCGTCTaGGGAAAGTTCTTCTGCAGCTACGGCTTTGAAAGC +
Preference number: 6 (lower is better)
Translates to: GRGRVSRQLRVV*GKFFCSYGFES
Trigger: GCTTTCAAAGCCGTAGCTGCAGAAGAACTTTCCTCAGACGACACGCAACTGACGTGAGACCCGCCCACGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561812.1
CDS TCA 72 bp GTGGCCAGGAGACTTACCACTTGCCGACAATCTTGCTaGCGTAGCCGGCCTTCTTCAGAAGCTCCGGCAGGA +
Preference number: 6 (lower is better)
Translates to: VARRLTTCRQSC*RSRPSSEAPAG
Trigger: TCCTGCCGGAGCTTCTGAAGAAGGCCGGCTACGTCAGCAAGATTGTCGGCAAGTGGTAAGTCTCCTGGCCAC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567779.1
CDS GCA 72 bp TTCCCCGAGGCAGATTTCACCACAGCAGATTTCTGCTaGCTCCCTGGACATGGCCTCTGTACCCTGGACCTC +
Preference number: 6 (lower is better)
Translates to: FPEADFTTADFC*LPGHGLCTLDL
Trigger: GAGGTCCAGGGTACAGAGGCCATGTCCAGGGAGGCAGCAGAAATCTGCTGTGGTGAAATCTGCCTCGGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561812.1
CDS GCA 72 bp GCTGTCACAGCCCCTCAGCCCTGCCACAAGCCAGCATaGGAGCAGATGTGCACGCTCTGTGCCAATAAAACT +
Preference number: 6 (lower is better)
Translates to: AVTAPQPCHKPA*EQMCTLCANKT
Trigger: AGTTTTATTGGCACAGAGCGTGCACATCTGCTCGCATGCTGGCTTGTGGCAGGGCTGAGGGGCTGTGACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562593.5
CDS CAA 72 bp GAAGGAAGCAGACACAAGGGCCACACAGGCTGTGATTaGCTCATTAAGCCTCCGGAACAGGCCGGTCCGCAG +
Preference number: 6 (lower is better)
Translates to: EGSRHKGHTGCD*LIKPPEQAGPQ
Trigger: CTGCGGACCGGCCTGTTCCGGAGGCTTAATGAGCAAATCACAGCCTGTGTGGCCCTTGTGTCTGCTTCCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562593.5
CDS TCA 72 bp ACCAGCACAGCAAATGCCCACGGCAAACTCCGGAGGTaGGTGGCAGCGGCGGTGTTCACTGAAAACTTCTTC +
Preference number: 6 (lower is better)
Translates to: TSTANAHGKLRR*VAAAVFTENFF
Trigger: GAAGAAGTTTTCAGTGAACACCGCCGCTGCCACTCACCTCCGGAGTTTGCCGTGGGCATTTGCTGTGCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562593.5
CDS GCA 72 bp AAGGAAGCAGACACAAGGGCCACACAGGCTGTGATTTaGTCATTAAGCCTCCGGAACAGGCCGGTCCGCAGA +
Preference number: 6 (lower is better)
Translates to: KEADTRATQAVI*SLSLRNRPVRR
Trigger: TCTGCGGACCGGCCTGTTCCGGAGGCTTAATGAGCAAATCACAGCCTGTGTGGCCCTTGTGTCTGCTTCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562593.5
CDS GCA 72 bp GGACGCTGGAGACACCTGAACACACCCAGAATCAGCTaGCGTTTCCCACCCAAGACACCCTCCTCATTTGGA +
Preference number: 6 (lower is better)
Translates to: GRWRHLNTPRIS*RFPPKTPSSFG
Trigger: TCCAAATGAGGAGGGTGTCTTGGGTGGGAAACGGCAGCTGATTCTGGGTGTGTTCAGGTGTCTCCAGCGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567779.1
CDS CAA 90 bp CCGCTGACTTACATGGCGAGCACAGAGGGTTGGCAGAATAGAAGTTaGGGAAAAGCAGCCCTTCTGCAGCCATCCGGTCCAAATTCGGGG +
Preference number: 6 (lower is better)
Translates to: PLTYMASTEGWQNRS*GKAALLQPSGPNSG
Trigger: CCCCGAATTTGGACCGGATGGCTGCAGAAGGGCTGCTTTTCCCAAACTTCTATTCTGCCAACCCTCTGTGCTCGCCATGTAAGTCAGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562593.5
CDS CAA 90 bp ATCAGCTGCCGTTTCCCACCCAAGACACCCTCCTCATTTGGAAACTaGTGGCCATGTCCCTTGGAACCAAGGCCAGGAAGTGGATGGAGC +
Preference number: 6 (lower is better)
Translates to: ISCRFPPKTPSSFGN*WPCPLEPRPGSGWS
Trigger: GCTCCATCCACTTCCTGGCCTTGGTTCCAAGGGACATGGCCACAAGTTTCCAAATGAGGAGGGTGTCTTGGGTGGGAAACGGCAGCTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567779.1
CDS CAA 90 bp CACCCAGAATCAGCTGCCGTTTCCCACCCAAGACACCCTCCTCATTaGGAAACTTGTGGCCATGTCCCTTGGAACCAAGGCCAGGAAGTG +
Preference number: 6 (lower is better)
Translates to: HPESAAVSHPRHPPH*ETCGHVPWNQGQEV
Trigger: CACTTCCTGGCCTTGGTTCCAAGGGACATGGCCACAAGTTTCCAAATGAGGAGGGTGTCTTGGGTGGGAAACGGCAGCTGATTCTGGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567779.1
CDS TCA 72 bp TGTCGTCTGAGGAAAGTTCTTCTGCAGCTACGGCTTTaGAAGCAGCATCCCCGACGCAGATTTCCCCGAGGC +
Preference number: 6 (lower is better)
Translates to: CRLRKVLLQLRL*KQHPRRRFPRG
Trigger: GCCTCGGGGAAATCTGCGTCGGGGATGCTGCTTTCAAAGCCGTAGCTGCAGAAGAACTTTCCTCAGACGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561812.1
CDS TCA 72 bp GCTGCAACTCCACTCCTAGCTGTACACCCAAGAGACTaGAACTTACGTCCACACGCAGGCCTGCATACGAGC +
Preference number: 6 (lower is better)
Translates to: AATPLLAVHPRD*NLRPHAGLHTS
Trigger: GCTCGTATGCAGGCCTGCGTGTGGACGTAAGTTTCAGTCTCTTGGGTGTACAGCTAGGAGTGGAGTTGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562593.5
CDS TCA 72 bp GAACGCTCCAACAAGTGGAGAGAAATTCGGGACAGGTaGCTCCTACCCAACCCTCTAGGCTCACTCAGGCGT +
Preference number: 6 (lower is better)
Translates to: ERSNKWREIRDR*LLPNPLGSLRR
Trigger: ACGCCTGAGTGAGCCTAGAGGGTTGGGTAGGAGTCACCTGTCCCGAATTTCTCTCCACTTGTTGGAGCGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565364.1
CDS GCA 72 bp GAAGCCCAGTTATCGTGTGACCCTGCAGTTCCACGCTaGAACTCCACTCCTAGCTGTACACCCAAGAGACTG +
Preference number: 6 (lower is better)
Translates to: EAQLSCDPAVPR*NSTPSCTPKRL
Trigger: CAGTCTCTTGGGTGTACAGCTAGGAGTGGAGTTGCAGCGTGGAACTGCAGGGTCACACGATAACTGGGCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562593.5
CDS CCA 72 bp AGGGCCCCGCTGACTTACATGGCGAGCACAGAGGGTTaGCAGAATAGAAGTTTGGGAAAAGCAGCCCTTCTG +
Preference number: 6 (lower is better)
Translates to: RAPLTYMASTEG*QNRSLGKAALL
Trigger: CAGAAGGGCTGCTTTTCCCAAACTTCTATTCTGCCAACCCTCTGTGCTCGCCATGTAAGTCAGCGGGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562593.5
CDS CAA 72 bp GTGTCGTCTGAGGAAAGTTCTTCTGCAGCTACGGCTTaGAAAGCAGCATCCCCGACGCAGATTTCCCCGAGG +
Preference number: 6 (lower is better)
Translates to: VSSEESSSAATA*KAASPTQISPR
Trigger: CCTCGGGGAAATCTGCGTCGGGGATGCTGCTTTCAAAGCCGTAGCTGCAGAAGAACTTTCCTCAGACGACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561812.1
CDS CAA 72 bp GCTGGGGAGGGCCTGCTGATGAGTACCGGTTTCTTCTaGGGATGGACTGTTTGGAAGCAGGTAGAAGGGATG +
Preference number: 6 (lower is better)
Translates to: AGEGLLMSTGFF*GWTVWKQVEGM
Trigger: CATCCCTTCTACCTGCTTCCAAACAGTCCATCCCAAGAAGAAACCGGTACTCATCAGCAGGCCCTCCCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562593.5
CDS CAA 72 bp TCAGCTGCCGTTTCCCACCCAAGACACCCTCCTCATTaGGAAACTTGTGGCCATGTCCCTTGGAACCAAGGC +
Preference number: 6 (lower is better)
Translates to: SAAVSHPRHPPH*ETCGHVPWNQG
Trigger: GCCTTGGTTCCAAGGGACATGGCCACAAGTTTCCAAATGAGGAGGGTGTCTTGGGTGGGAAACGGCAGCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567779.1
CDS CCA 72 bp GCACAGCAAATGCCCACGGCAAACTCCGGAGGTGAGTaGCAGCGGCGGTGTTCACTGAAAACTTCTTCAAAT +
Preference number: 6 (lower is better)
Translates to: AQQMPTANSGGE*QRRCSLKTSSN
Trigger: ATTTGAAGAAGTTTTCAGTGAACACCGCCGCTGCCACTCACCTCCGGAGTTTGCCGTGGGCATTTGCTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562593.5
CDS CCA 72 bp ACATGGCGAGCACAGAGGGTTGGCAGAATAGAAGTTTaGGAAAAGCAGCCCTTCTGCAGCCATCCGGTCCAA +
Preference number: 6 (lower is better)
Translates to: TWRAQRVGRIEV*EKQPFCSHPVQ
Trigger: TTGGACCGGATGGCTGCAGAAGGGCTGCTTTTCCCAAACTTCTATTCTGCCAACCCTCTGTGCTCGCCATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562593.5
CDS CCA 72 bp AGAAATGAAACATCCTGTGCGCCTAAAACCGCAGCGTaGGGGCTGTGTAGCACCCAAGCTCTCATCAGCTCA +
Preference number: 6 (lower is better)
Translates to: RNETSCAPKTAA*GLCSTQALISS
Trigger: TGAGCTGATGAGAGCTTGGGTGCTACACAGCCCCCACGCTGCGGTTTTAGGCGCACAGGATGTTTCATTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565364.1
CDS CCA 72 bp TTCCCACCCAAGACACCCTCCTCATTTGGAAACTTGTaGCCATGTCCCTTGGAACCAAGGCCAGGAAGTGGA +
Preference number: 6 (lower is better)
Translates to: FPPKTPSSFGNL*PCPLEPRPGSG
Trigger: TCCACTTCCTGGCCTTGGTTCCAAGGGACATGGCCACAAGTTTCCAAATGAGGAGGGTGTCTTGGGTGGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567779.1
CDS CAA 72 bp CCAGCAGGTGGTTCACATTTGACCCATGGGCTGGAGTaGGCCAACCTCTGTCTTAGTGAAAGTGCAGCTACC +
Preference number: 6 (lower is better)
Translates to: PAGGSHLTHGLE*ANLCLSESAAT
Trigger: GGTAGCTGCACTTTCACTAAGACAGAGGTTGGCCAACTCCAGCCCATGGGTCAAATGTGAACCACCTGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562593.5
CDS CAA 72 bp CGTTTCCCACCCAAGACACCCTCCTCATTTGGAAACTaGTGGCCATGTCCCTTGGAACCAAGGCCAGGAAGT +
Preference number: 6 (lower is better)
Translates to: RFPPKTPSSFGN*WPCPLEPRPGS
Trigger: ACTTCCTGGCCTTGGTTCCAAGGGACATGGCCACAAGTTTCCAAATGAGGAGGGTGTCTTGGGTGGGAAACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567779.1
CDS CAA 90 bp GTCAGTTGCGTGTCGTCTGAGGAAAGTTCTTCTGCAGCTACGGCTTaGAAAGCAGCATCCCCGACGCAGATTTCCCCGAGGCAGATTTCA +
Preference number: 6 (lower is better)
Translates to: VSCVSSEESSSAATA*KAASPTQISPRQIS
Trigger: TGAAATCTGCCTCGGGGAAATCTGCGTCGGGGATGCTGCTTTCAAAGCCGTAGCTGCAGAAGAACTTTCCTCAGACGACACGCAACTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561812.1
CDS TCA 72 bp TTCCAGCCTTTCAGTTCTTCAGACCTTAGGGACACCTaGCCTTCGCTCAGCATTCTCCAGAGGACAGAGACA +
Preference number: 6 (lower is better)
Translates to: FQPFSSSDLRDT*PSLSILQRTET
Trigger: TGTCTCTGTCCTCTGGAGAATGCTGAGCGAAGGTCAGGTGTCCCTAAGGTCTGAAGAACTGAAAGGCTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569433.1
CDS GCA 72 bp CCTCAGCCCTGCCACAAGCCAGCATGCGAGCAGATGTaGACGCTCTGTGCCAATAAAACTTTATTCATCAAC +
Preference number: 6 (lower is better)
Translates to: PQPCHKPACEQM*TLCANKTLFIN
Trigger: GTTGATGAATAAAGTTTTATTGGCACAGAGCGTGCACATCTGCTCGCATGCTGGCTTGTGGCAGGGCTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562593.5
CDS CAA 90 bp ATTTCATCAACTGCTAGGCTGTTACTCTCCTTCCTGGTGGCTTCTTaGTGGTTTAGACCAGAGCTTTCACCATCCAACAGGCCCCTAGGG +
Preference number: 6 (lower is better)
Translates to: ISSTARLLLSFLVAS*WFRPELSPSNRPLG
Trigger: CCCTAGGGGCCTGTTGGATGGTGAAAGCTCTGGTCTAAACCACAAAGAAGCCACCAGGAAGGAGAGTAACAGCCTAGCAGTTGATGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565364.1
CDS TCA 72 bp CACAACAACAACAAAACCCAGCAGGTGGTTCACATTTaGCCCATGGGCTGGAGTTGGCCAACCTCTGTCTTA +
Preference number: 6 (lower is better)
Translates to: HNNNKTQQVVHI*PMGWSWPTSVL
Trigger: TAAGACAGAGGTTGGCCAACTCCAGCCCATGGGTCAAATGTGAACCACCTGCTGGGTTTTGTTGTTGTTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562593.5
CDS TCA 72 bp GAAATTCTTCATAATATCACTTGCCGACAATCTTGCTaGCGTAGCCGGCCTTCTTCAGAAGCTCCGGCAGGA +
Preference number: 6 (lower is better)
Translates to: EILHNITCRQSC*RSRPSSEAPAG
Trigger: TCCTGCCGGAGCTTCTGAAGAAGGCCGGCTACGTCAGCAAGATTGTCGGCAAGTGATATTATGAAGAATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567525.5
CDS GCA 72 bp CATCTGCATGCTCGCAGGAGCTGGCCTCTAAACACGTaGATCTATTTTCAACATAAATACACAGGCCCTCGT +
Preference number: 6 (lower is better)
Translates to: HLHARRSWPLNT*IYFQHKYTGPR
Trigger: ACGAGGGCCTGTGTATTTATGTTGAAAATAGATGCACGTGTTTAGAGGCCAGCTCCTGCGAGCATGCAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562593.5
CDS CCA 72 bp CCTTCAGCAGCTTCGGCAGCACAAACACACAACACCTaGGAAAGACAACACATTCTAAACACAACGACCAAG +
Preference number: 6 (lower is better)
Translates to: PSAASAAQTHNT*ERQHILNTTTK
Trigger: CTTGGTCGTTGTGTTTAGAATGTGTTGTCTTTCCCAGGTGTTGTGTGTTTGTGCTGCCGAAGCTGCTGAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562593.5
CDS CCA 72 bp GGATTTCATCAACTGCTAGGCTGTTACTCTCCTTCCTaGTGGCTTCTTTGTGGTTTAGACCAGAGCTTTCAC +
Preference number: 6 (lower is better)
Translates to: GFHQLLGCYSPS*WLLCGLDQSFH
Trigger: GTGAAAGCTCTGGTCTAAACCACAAAGAAGCCACCAGGAAGGAGAGTAACAGCCTAGCAGTTGATGAAATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565364.1