RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GALM (Homo sapiens)

Ensembl gene IDs: ENSG00000143891

Ensembl transcript IDs: ENST00000272252.10, ENST00000410063.5, ENST00000427858.4, ENST00000434934.1, ENST00000444351.5

Found 272 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGGCAAGGCTCTCTCCTCACCCTAATAGCTCCTGTTTCCAGTGCTTaGCTGTCTTTCTTCCCAAGCGTTGGCCGGGCTGTGCTTTCTCAG +
Preference number: 1 (lower is better)
Translates to: RQGSLLTLIAPVSSA*LSFFPSVGRAVLSQ
Trigger: CTGAGAAAGCACAGCCCGGCCAACGCTTGGGAAGAAAGACAGGCAAGCACTGGAAACAGGAGCTATTAGGGTGAGGAGAGAGCCTTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272252.10
3UTR CCA 90 bp AATAGCTCCTGTTTCCAGTGCTTGCCTGTCTTTCTTCCCAAGCGTTaGCCGGGCTGTGCTTTCTCAGTTAACCCAAAGGCTCTTGCAGGC +
Preference number: 1 (lower is better)
Translates to: NSSCFQCLPVFLPKR*PGCAFSVNPKALAG
Trigger: GCCTGCAAGAGCCTTTGGGTTAACTGAGAAAGCACAGCCCGGCCAACGCTTGGGAAGAAAGACAGGCAAGCACTGGAAACAGGAGCTATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272252.10
3UTR CCA 90 bp GTTGGTTGGGTTCACTTGCCCTCTGAACTGCACAGGGAATCGAGCTaGTCATTAGACATGGCCTGGAGCCAGTCACTGGAAAAGGAAATC +
Preference number: 1 (lower is better)
Translates to: VGWVHLPSELHRESS*SLDMAWSQSLEKEI
Trigger: GATTTCCTTTTCCAGTGACTGGCTCCAGGCCATGTCTAATGACCAGCTCGATTCCCTGTGCAGTTCAGAGGGCAAGTGAACCCAACCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272252.10
ENST00000410063.5
3UTR CCA 90 bp CCCTCTGAACTGCACAGGGAATCGAGCTGGTCATTAGACATGGCCTaGAGCCAGTCACTGGAAAAGGAAATCAATACCCAGACTGATTCT +
Preference number: 1 (lower is better)
Translates to: PSELHRESSWSLDMA*SQSLEKEINTQTDS
Trigger: AGAATCAGTCTGGGTATTGATTTCCTTTTCCAGTGACTGGCTCCAGGCCATGTCTAATGACCAGCTCGATTCCCTGTGCAGTTCAGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272252.10
ENST00000410063.5
3UTR GCA 90 bp TTGTCACATACAATCTCTGTCCCTGGTGCAATGTCATCCTCACTGTaGTGTGAAAGGCAAGGCTCTCTCCTCACCCTAATAGCTCCTGTT +
Preference number: 1 (lower is better)
Translates to: LSHTISVPGAMSSSL*CERQGSLLTLIAPV
Trigger: AACAGGAGCTATTAGGGTGAGGAGAGAGCCTTGCCTTTCACAGCACAGTGAGGATGACATTGCACCAGGGACAGAGATTGTATGTGACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272252.10
3UTR CCA 90 bp TCTTTAGATCCCTTCAGACAGAAATTGTGGTCAAAACCATTGAGATaGAAGTCCTGCAGGTGTTTTCCAAGCTCCACTGGCTTTCTCAGG +
Preference number: 1 (lower is better)
Translates to: SLDPFRQKLWSKPLR*KSCRCFPSSTGFLR
Trigger: CCTGAGAAAGCCAGTGGAGCTTGGAAAACACCTGCAGGACTTCCATCTCAATGGTTTTGACCACAATTTCTGTCTGAAGGGATCTAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444351.5
3UTR-3UTR CCA 90 bp GTGGAGAGATGGAGCCAACAGCAGCATGGGAGTCCCTGGCTAGGGTCAGGGCTTTGGACAGGAGACAGGTaGCTGAGCCTAGCCCTGGAC +
Preference number: 2 (lower is better)
Translates to: VERWSQQQHGSPWLGSGLWTGDR*LSLALD
Trigger: GTCCAGGGCTAGGCTCAGCCACCTGTCTCCTGTCCA...AAGCCCTGACCCTAGCCAGGGACTCCCATGCTGCTGTTGGCTCCATCTCTCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272252.10
ENST00000410063.5
3UTR-3UTR CCA 90 bp GTGGAGAGATGGAGCCAACAGCAGCATGGGAGTCCCTGGCTAGGGTCAGGGCTTCACAGGGAATCGAGCTaGTCATTAGACATGGCCTGG +
Preference number: 2 (lower is better)
Translates to: VERWSQQQHGSPWLGSGLHRESS*SLDMAW
Trigger: CCAGGCCATGTCTAATGACCAGCTCGATTCCCTGTG...AAGCCCTGACCCTAGCCAGGGACTCCCATGCTGCTGTTGGCTCCATCTCTCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272252.10
ENST00000410063.5
3UTR-3UTR CCA 90 bp GCCCCAGCCTTGTCACATACAATCTCTGTCCCTGGTGCAATGTCATCCTCACTGTGGACAGGAGACAGGTaGCTGAGCCTAGCCCTGGAC +
Preference number: 2 (lower is better)
Translates to: APALSHTISVPGAMSSSLWTGDR*LSLALD
Trigger: GTCCAGGGCTAGGCTCAGCCACCTGTCTCCTGTCCA...CAGTGAGGATGACATTGCACCAGGGACAGAGATTGTATGTGACAAGGCTGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272252.10
3UTR-3UTR CCA 90 bp AGGCAGTGTGGAGAGATGGAGCCAACAGCAGCATGGGAGTCCCTGGCTAGGGTCCCTGGAGCCAGTCACTaGAAAAGGAAATCAATACCC +
Preference number: 2 (lower is better)
Translates to: RQCGEMEPTAAWESLARVPGASH*KRKSIP
Trigger: GGGTATTGATTTCCTTTTCCAGTGACTGGCTCCAGG...GACCCTAGCCAGGGACTCCCATGCTGCTGTTGGCTCCATCTCTCCACACTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272252.10
ENST00000410063.5
3UTR CAA 90 bp AAGGCAAGGCTCTCTCCTCACCCTAATAGCTCCTGTTTCCAGTGCTaGCCTGTCTTTCTTCCCAAGCGTTGGCCGGGCTGTGCTTTCTCA +
Preference number: 2 (lower is better)
Translates to: KARLSPHPNSSCFQC*PVFLPKRWPGCAFS
Trigger: TGAGAAAGCACAGCCCGGCCAACGCTTGGGAAGAAAGACAGGCAAGCACTGGAAACAGGAGCTATTAGGGTGAGGAGAGAGCCTTGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272252.10
3UTR-3UTR CCA 90 bp AAAGAAGGAGCCCCAGCCTTGTCACATACAATCTCTGTCCCTGGTGCAATGTCAGAGCCAACAGCAGCATaGGAGTCCCTGGCTAGGGTC +
Preference number: 2 (lower is better)
Translates to: KEGAPALSHTISVPGAMSEPTAA*ESLARV
Trigger: GACCCTAGCCAGGGACTCCCATGCTGCTGTTGGCTC...TGACATTGCACCAGGGACAGAGATTGTATGTGACAAGGCTGGGGCTCCTTCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272252.10
3UTR-3UTR CCA 90 bp AAGGAGCCCCAGCCTTGTCACATACAATCTCTGTCCCTGGTGCAATGTCATCCTGGCAGTGTGGAGAGATaGAGCCAACAGCAGCATGGG +
Preference number: 2 (lower is better)
Translates to: KEPQPCHIQSLSLVQCHPGSVER*SQQQHG
Trigger: CCCATGCTGCTGTTGGCTCCATCTCTCCACACTGCC...AGGATGACATTGCACCAGGGACAGAGATTGTATGTGACAAGGCTGGGGCTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272252.10
3UTR-3UTR TCA 90 bp AGCCCCAGCCTTGTCACATACAATCTCTGTCCCTGGTGCAATGTCATCCTCACTGGTTCACTTGCCCTCTaGACTGCACAGGGAATCGAG +
Preference number: 2 (lower is better)
Translates to: SPSLVTYNLCPWCNVILTGSLAL*TAQGIE
Trigger: CTCGATTCCCTGTGCAGTTCAGAGGGCAAGTGAACC...AGTGAGGATGACATTGCACCAGGGACAGAGATTGTATGTGACAAGGCTGGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272252.10
3UTR-3UTR CCA 90 bp GAACTGCACAGGGAATCGAGCTGGTCATTAGACATGGCCTGGAGCCAGTCACTGAGCCTAGCCCTGGACTaGATCATATCTTCACACTTC +
Preference number: 2 (lower is better)
Translates to: ELHRESSWSLDMAWSQSLSLALD*IISSHF
Trigger: GAAGTGTGAAGATATGATCCAGTCCAGGGCTAGGCT...CAGTGACTGGCTCCAGGCCATGTCTAATGACCAGCTCGATTCCCTGTGCAGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272252.10
ENST00000410063.5
3UTR-3UTR CCA 90 bp AACTGGACCCCGGGCTGGGTGGTGTATACTTCTAGTACCCGCCCGCTTGCAGCATCAAAACCATTGAGATaGAAGTCCTGCAGGTGTTTT +
Preference number: 2 (lower is better)
Translates to: NWTPGWVVYTSSTRPLAASKPLR*KSCRCF
Trigger: AAAACACCTGCAGGACTTCCATCTCAATGGTTTTGA...TGCTGCAAGCGGGCGGGTACTAGAAGTATACACCACCCAGCCCGGGGTCCAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444351.5
3UTR-3UTR TCA 90 bp GAACTGCACAGGGAATCGAGCTGGTCATTAGACATGGCCTGGAGCCAGTCACTGAATCAATACCCAGACTaGTTCTCAGAACAGCCACCA +
Preference number: 2 (lower is better)
Translates to: ELHRESSWSLDMAWSQSLNQYPD*FSEQPP
Trigger: TGGTGGCTGTTCTGAGAATCAGTCTGGGTATTGATT...CAGTGACTGGCTCCAGGCCATGTCTAATGACCAGCTCGATTCCCTGTGCAGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272252.10
ENST00000410063.5
3UTR-3UTR GCA 90 bp AGCCCCAGCCTTGTCACATACAATCTCTGTCCCTGGTGCAATGTCATCCTCACTTTCAAGCGATTCTCCTaGTTCAGCCTCCCAAGTAGC +
Preference number: 2 (lower is better)
Translates to: SPSLVTYNLCPWCNVILTFKRFS*FSLPSS
Trigger: GCTACTTGGGAGGCTGAAGCAGGAGAATCGCTTGAA...AGTGAGGATGACATTGCACCAGGGACAGAGATTGTATGTGACAAGGCTGGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272252.10
3UTR-3UTR GCA 90 bp GTGGTCAAAACCATTGAGATGGAAGTCCTGCAGGTGTTTTCCAAGCTCCACTGGTGGGGCAACTTCTCCTaGAAACTTTGCTCCTGGTCC +
Preference number: 2 (lower is better)
Translates to: VVKTIEMEVLQVFSKLHWWGNFS*KLCSWS
Trigger: GGACCAGGAGCAAAGTTTGCAGGAGAAGTTGCCCCA...CCAGTGGAGCTTGGAAAACACCTGCAGGACTTCCATCTCAATGGTTTTGACCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000444351.5
3UTR-3UTR GCA 90 bp GTGGTCAAAACCATTGAGATGGAAGTCCTGCAGGTGTTTTCCAAGCTCCACTGGTCAGGTCGAATGCAGTaGCTTGCACTGGGGCAACTT +
Preference number: 2 (lower is better)
Translates to: VVKTIEMEVLQVFSKLHWSGRMQ*LALGQL
Trigger: AAGTTGCCCCAGTGCAAGGCACTGCATTCGACCTGA...CCAGTGGAGCTTGGAAAACACCTGCAGGACTTCCATCTCAATGGTTTTGACCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000444351.5
3UTR-3UTR TCA 90 bp GCCCCAGCCTTGTCACATACAATCTCTGTCCCTGGTGCAATGTCATCCTCACTGAATCAATACCCAGACTaGTTCTCAGAACAGCCACCA +
Preference number: 2 (lower is better)
Translates to: APALSHTISVPGAMSSSLNQYPD*FSEQPP
Trigger: TGGTGGCTGTTCTGAGAATCAGTCTGGGTATTGATT...CAGTGAGGATGACATTGCACCAGGGACAGAGATTGTATGTGACAAGGCTGGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272252.10
3UTR-3UTR CCA 90 bp AAGGAGCCCCAGCCTTGTCACATACAATCTCTGTCCCTGGTGCAATGTCATCCTAGCCTAGCCCTGGACTaGATCATATCTTCACACTTC +
Preference number: 2 (lower is better)
Translates to: KEPQPCHIQSLSLVQCHPSLALD*IISSHF
Trigger: GAAGTGTGAAGATATGATCCAGTCCAGGGCTAGGCT...AGGATGACATTGCACCAGGGACAGAGATTGTATGTGACAAGGCTGGGGCTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272252.10
3UTR-3UTR GCA 90 bp GAAATTGTGGTCAAAACCATTGAGATGGAAGTCCTGCAGGTGTTTTCCAAGCTCCTTTCTCAGGTCGAATaGAGTGCCTTGCACTGGGGC +
Preference number: 2 (lower is better)
Translates to: EIVVKTIEMEVLQVFSKLLSQVE*SALHWG
Trigger: GCCCCAGTGCAAGGCACTGCATTCGACCTGAGAAAG...GAGCTTGGAAAACACCTGCAGGACTTCCATCTCAATGGTTTTGACCACAATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000444351.5
3UTR-3UTR GCA 90 bp GAAATTGTGGTCAAAACCATTGAGATGGAAGTCCTGCAGGTGTTTTCCAAGCTCTCGAATGCAGTGCCTTaGACTGGGGCAACTTCTCCT +
Preference number: 2 (lower is better)
Translates to: EIVVKTIEMEVLQVFSKLSNAVP*TGATSP
Trigger: AGGAGAAGTTGCCCCAGTGCAAGGCACTGCATTCGA...GAGCTTGGAAAACACCTGCAGGACTTCCATCTCAATGGTTTTGACCACAATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000444351.5
3UTR-3UTR CCA 90 bp ACAGAAATTGTGGTCAAAACCATTGAGATGGAAGTCCTGCAGGTGTTTTCCAAGTGCAGTGCCTTGCACTaGGGCAACTTCTCCTGCAAA +
Preference number: 2 (lower is better)
Translates to: TEIVVKTIEMEVLQVFSKCSALH*GNFSCK
Trigger: TTTGCAGGAGAAGTTGCCCCAGTGCAAGGCACTGCA...CTTGGAAAACACCTGCAGGACTTCCATCTCAATGGTTTTGACCACAATTTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444351.5
3UTR-3UTR CCA 90 bp TGTAAGCCTCAGTTTCCTCACTTATCAATCATCTACTGCTGTATAGAGACAGGTTCATTAGACATGGCCTaGAGCCAGTCACTGGAAAAG +
Preference number: 2 (lower is better)
Translates to: CKPQFPHLSIIYCCIETGSLDMA*SQSLEK
Trigger: CTTTTCCAGTGACTGGCTCCAGGCCATGTCTAATGA...ACCTGTCTCTATACAGCAGTAGATGATTGATAAGTGAGGAAACTGAGGCTTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272252.10
3UTR GCA 72 bp AGGCTCTCTCCTCACCCTAATAGCTCCTGTTTCCAGTaGTTGCCTGTCTTTCTTCCCAAGCGTTGGCCGGGC +
Preference number: 3 (lower is better)
Translates to: RLSPHPNSSCFQ*LPVFLPKRWPG
Trigger: GCCCGGCCAACGCTTGGGAAGAAAGACAGGCAAGCACTGGAAACAGGAGCTATTAGGGTGAGGAGAGAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272252.10
3UTR CCA 72 bp GTTCACTTGCCCTCTGAACTGCACAGGGAATCGAGCTaGTCATTAGACATGGCCTGGAGCCAGTCACTGGAA +
Preference number: 3 (lower is better)
Translates to: VHLPSELHRESS*SLDMAWSQSLE
Trigger: TTCCAGTGACTGGCTCCAGGCCATGTCTAATGACCAGCTCGATTCCCTGTGCAGTTCAGAGGGCAAGTGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272252.10
ENST00000410063.5
3UTR CCA 72 bp CTGCACAGGGAATCGAGCTGGTCATTAGACATGGCCTaGAGCCAGTCACTGGAAAAGGAAATCAATACCCAG +
Preference number: 3 (lower is better)
Translates to: LHRESSWSLDMA*SQSLEKEINTQ
Trigger: CTGGGTATTGATTTCCTTTTCCAGTGACTGGCTCCAGGCCATGTCTAATGACCAGCTCGATTCCCTGTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272252.10
ENST00000410063.5
3UTR-3UTR CAA 90 bp ACAGAAATTGTGGTCAAAACCATTGAGATGGAAGTCCTGCAGGTGTTTTCCAAGGTCGAATGCAGTGCCTaGCACTGGGGCAACTTCTCC +
Preference number: 3 (lower is better)
Translates to: TEIVVKTIEMEVLQVFSKVECSA*HWGNFS
Trigger: GGAGAAGTTGCCCCAGTGCAAGGCACTGCATTCGAC...CTTGGAAAACACCTGCAGGACTTCCATCTCAATGGTTTTGACCACAATTTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000444351.5
3UTR GCA 72 bp TGTAAGCCTCAGTTTCCTCACTTATCAATCATCTACTaGTGTATAGAGACAGGTCCATCTCCTAGCATGCAG +
Preference number: 3 (lower is better)
Translates to: CKPQFPHLSIIY*CIETGPSPSMQ
Trigger: CTGCATGCTAGGAGATGGACCTGTCTCTATACAGCAGTAGATGATTGATAAGTGAGGAAACTGAGGCTTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272252.10
CDS-3UTR CCA 90 bp AGGCAGTGTGGAGAGATGGAGCCAACAGCAGCATGGGAGTCCCTGGCTAGGGTCTGGACAGGAGACAGGTaGCTGAGCCTAGCCCTGGAC +
Preference number: 4 (lower is better)
Translates to: RQCGEMEPTAAWESLARVWTGDR*LSLALD
Trigger: GTCCAGGGCTAGGCTCAGCCACCTGTCTCCTGTCCA...GACCCTAGCCAGGGACTCCCATGCTGCTGTTGGCTCCATCTCTCCACACTGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272252.10
ENST00000410063.5
CDS-3UTR TCA 90 bp AGGCAGTGTGGAGAGATGGAGCCAACAGCAGCATGGGAGTCCCTGGCTAGGGTCTGCAGCCCCAGGAGATaGTGTCCACTCTCAAGAGGT +
Preference number: 4 (lower is better)
Translates to: RQCGEMEPTAAWESLARVCSPRR*CPLSRG
Trigger: ACCTCTTGAGAGTGGACATCATCTCCTGGGGCTGCA...GACCCTAGCCAGGGACTCCCATGCTGCTGTTGGCTCCATCTCTCCACACTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272252.10
ENST00000410063.5
CDS-3UTR GCA 90 bp GTGGAGAGATGGAGCCAACAGCAGCATGGGAGTCCCTGGCTAGGGTCAGGGCTTCTTTCTCAGGTCGAATaGAGTGCCTTGCACTGGGGC +
Preference number: 4 (lower is better)
Translates to: VERWSQQQHGSPWLGSGLLSQVE*SALHWG
Trigger: GCCCCAGTGCAAGGCACTGCATTCGACCTGAGAAAG...AAGCCCTGACCCTAGCCAGGGACTCCCATGCTGCTGTTGGCTCCATCTCTCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272252.10
ENST00000410063.5
CDS-3UTR CCA 90 bp AGGCAGTGTGGAGAGATGGAGCCAACAGCAGCATGGGAGTCCCTGGCTAGGGTCCTGATGCGCGAGAACTaGACGCCATTTGACAGCACC +
Preference number: 4 (lower is better)
Translates to: RQCGEMEPTAAWESLARVLMREN*TPFDST
Trigger: GGTGCTGTCAAATGGCGTCCAGTTCTCGCGCATCAG...GACCCTAGCCAGGGACTCCCATGCTGCTGTTGGCTCCATCTCTCCACACTGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272252.10
CDS-3UTR TCA 90 bp AGGCAGTGTGGAGAGATGGAGCCAACAGCAGCATGGGAGTCCCTGGCTAGGGTCCCTTCCCATCCACCTTaGAGGTTCCTTTGGCGATTC +
Preference number: 4 (lower is better)
Translates to: RQCGEMEPTAAWESLARVPSHPP*RFLWRF
Trigger: GAATCGCCAAAGGAACCTTCAAGGTGGATGGGAAGG...GACCCTAGCCAGGGACTCCCATGCTGCTGTTGGCTCCATCTCTCCACACTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272252.10
CDS-3UTR TCA 90 bp AGGCAGTGTGGAGAGATGGAGCCAACAGCAGCATGGGAGTCCCTGGCTAGGGTCGGGTCAGGGCTTAGATaGCGACATTGTTGGTTGGGT +
Preference number: 4 (lower is better)
Translates to: RQCGEMEPTAAWESLARVGSGLR*RHCWLG
Trigger: ACCCAACCAACAATGTCGTCATCTAAGCCCTGACCC...GACCCTAGCCAGGGACTCCCATGCTGCTGTTGGCTCCATCTCTCCACACTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272252.10
ENST00000410063.5
CDS-3UTR GCA 90 bp GTGGAGAGATGGAGCCAACAGCAGCATGGGAGTCCCTGGCTAGGGTCAGGGCTTTCGAATGCAGTGCCTTaGACTGGGGCAACTTCTCCT +
Preference number: 4 (lower is better)
Translates to: VERWSQQQHGSPWLGSGLSNAVP*TGATSP
Trigger: AGGAGAAGTTGCCCCAGTGCAAGGCACTGCATTCGA...AAGCCCTGACCCTAGCCAGGGACTCCCATGCTGCTGTTGGCTCCATCTCTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272252.10
ENST00000410063.5
CDS-3UTR CCA 90 bp GTGGAGAGATGGAGCCAACAGCAGCATGGGAGTCCCTGGCTAGGGTCAGGGCTTAACTGGACCCCGGGCTaGGTGGTGTATACTTCTAGT +
Preference number: 4 (lower is better)
Translates to: VERWSQQQHGSPWLGSGLNWTPG*VVYTSS
Trigger: ACTAGAAGTATACACCACCCAGCCCGGGGTCCAGTT...AAGCCCTGACCCTAGCCAGGGACTCCCATGCTGCTGTTGGCTCCATCTCTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272252.10
ENST00000410063.5
CDS-3UTR TCA 90 bp AACTGGACCCCGGGCTGGGTGGTGTATACTTCTAGTACCCGCCCGCTTGCAGCATTGTTAATGGCCAGGTaGTACTCCTTCCCATCCACC +
Preference number: 4 (lower is better)
Translates to: NWTPGWVVYTSSTRPLAALLMAR*YSFPST
Trigger: GGTGGATGGGAAGGAGTATCACCTGGCCATTAACAA...TGCTGCAAGCGGGCGGGTACTAGAAGTATACACCACCCAGCCCGGGGTCCAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444351.5
CDS-3UTR TCA 90 bp GCCCCAGCCTTGTCACATACAATCTCTGTCCCTGGTGCAATGTCATCCTCACTGGAACTGGACGCCATTTaGCAGCACCCGAGGGGTCCA +
Preference number: 4 (lower is better)
Translates to: APALSHTISVPGAMSSSLELDAI*QHPRGP
Trigger: TGGACCCCTCGGGTGCTGTCAAATGGCGTCCAGTTC...CAGTGAGGATGACATTGCACCAGGGACAGAGATTGTATGTGACAAGGCTGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272252.10
CDS-3UTR GCA 90 bp GAACTGCACAGGGAATCGAGCTGGTCATTAGACATGGCCTGGAGCCAGTCACTGTCCGAGGCTCTCCCCTaGCTGTCTTTGACCTCTAGG +
Preference number: 4 (lower is better)
Translates to: ELHRESSWSLDMAWSQSLSEALP*LSLTSR
Trigger: CCTAGAGGTCAAAGACAGGCAGGGGAGAGCCTCGGA...CAGTGACTGGCTCCAGGCCATGTCTAATGACCAGCTCGATTCCCTGTGCAGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272252.10
ENST00000410063.5
CDS-3UTR TCA 90 bp ACTGGACCCCGGGCTGGGTGGTGTATACTTCTAGTACCCGCCCGCTTGCAGCATCTTTATCAAACCCTCTaGCTCCTCCATGCAGACTGT +
Preference number: 4 (lower is better)
Translates to: TGPRAGWCILLVPARLQHLYQTL*LLHADC
Trigger: ACAGTCTGCATGGAGGAGTCAGAGGGTTTGATAAAG...ATGCTGCAAGCGGGCGGGTACTAGAAGTATACACCACCCAGCCCGGGGTCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444351.5
CDS-3UTR TCA 90 bp GTGGAGAGATGGAGCCAACAGCAGCATGGGAGTCCCTGGCTAGGGTCAGGGCTTTGTGGTCAAAACCATTaGGATGGAAGTCCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: VERWSQQQHGSPWLGSGLCGQNH*DGSPAG
Trigger: ACCTGCAGGACTTCCATCTCAATGGTTTTGACCACA...AAGCCCTGACCCTAGCCAGGGACTCCCATGCTGCTGTTGGCTCCATCTCTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272252.10
ENST00000410063.5
CDS-3UTR TCA 90 bp ACTGGACCCCGGGCTGGGTGGTGTATACTTCTAGTACCCGCCCGCTTGCAGCATTGTGGTCAAAACCATTaGGATGGAAGTCCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: TGPRAGWCILLVPARLQHCGQNH*DGSPAG
Trigger: ACCTGCAGGACTTCCATCTCAATGGTTTTGACCACA...ATGCTGCAAGCGGGCGGGTACTAGAAGTATACACCACCCAGCCCGGGGTCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444351.5
CDS-3UTR TCA 90 bp GCCCCAGCCTTGTCACATACAATCTCTGTCCCTGGTGCAATGTCATCCTCACTGGCATCAGGCCAGTTCTaGGTCTCCAGGCAGAAACCG +
Preference number: 4 (lower is better)
Translates to: APALSHTISVPGAMSSSLASGQF*VSRQKP
Trigger: CGGTTTCTGCCTGGAGACTCAGAACTGGCCTGATGC...CAGTGAGGATGACATTGCACCAGGGACAGAGATTGTATGTGACAAGGCTGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272252.10
CDS-3UTR TCA 90 bp GAACTGCACAGGGAATCGAGCTGGTCATTAGACATGGCCTGGAGCCAGTCACTGGGTTCACTTGCCCTCTaGACTGCACAGGGAATCGAG +
Preference number: 4 (lower is better)
Translates to: ELHRESSWSLDMAWSQSLGSLAL*TAQGIE
Trigger: CTCGATTCCCTGTGCAGTTCAGAGGGCAAGTGAACC...CAGTGACTGGCTCCAGGCCATGTCTAATGACCAGCTCGATTCCCTGTGCAGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272252.10
ENST00000410063.5
CDS-3UTR GCA 90 bp GGGTGGTGTATACTTCTAGTACCCGCCCGCTTGCAGCATGATGCACCCTTGCACTCAGGTCGAATGCAGTaGCTTGCACTGGGGCAACTT +
Preference number: 4 (lower is better)
Translates to: GWCILLVPARLQHDAPLHSGRMQ*LALGQL
Trigger: AAGTTGCCCCAGTGCAAGGCACTGCATTCGACCTGA...GTGCAAGGGTGCATCATGCTGCAAGCGGGCGGGTACTAGAAGTATACACCACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444351.5
CDS-3UTR CCA 90 bp ACAGGAGACAGGTGGCTGAGCCTAGCCCTGGACTGGATCATATCTTCACACTTCGCCATAGGGAAAGTTTaGCGTGTGCAGCCACTGCCC +
Preference number: 4 (lower is better)
Translates to: TGDRWLSLALDWIISSHFAIGKV*RVQPLP
Trigger: GGGCAGTGGCTGCACACGCCAAACTTTCCCTATGGC...GAAGTGTGAAGATATGATCCAGTCCAGGGCTAGGCTCAGCCACCTGTCTCCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272252.10
ENST00000410063.5
CDS-3UTR CCA 90 bp TCCACTGGCTTTCTCAGGTCGAATGCAGTGCCTTGCACTGGGGCAACTTCTCCTCTGATGCGCGAGAACTaGACGCCATTTGACAGCACC +
Preference number: 4 (lower is better)
Translates to: STGFLRSNAVPCTGATSPLMREN*TPFDST
Trigger: GGTGCTGTCAAATGGCGTCCAGTTCTCGCGCATCAG...AGGAGAAGTTGCCCCAGTGCAAGGCACTGCATTCGACCTGAGAAAGCCAGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444351.5
CDS-3UTR CCA 90 bp ACTGGACCCCGGGCTGGGTGGTGTATACTTCTAGTACCCGCCCGCTTGCAGCATATGGTCATTTATATTTaGGGAAGCCTGGCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: TGPRAGWCILLVPARLQHMVIYI*GSLACQ
Trigger: CTGGCAGGCCAGGCTTCCCCAAATATAAATGACCAT...ATGCTGCAAGCGGGCGGGTACTAGAAGTATACACCACCCAGCCCGGGGTCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444351.5
CDS-3UTR CCA 90 bp GACATTGTTGGTTGGGTTCACTTGCCCTCTGAACTGCACAGGGAATCGAGCTGGGGACCCCGGGCTGGGTaGTGTATACTTCTAGTACCC +
Preference number: 4 (lower is better)
Translates to: DIVGWVHLPSELHRESSWGPRAG*CILLVP
Trigger: GGGTACTAGAAGTATACACCACCCAGCCCGGGGTCC...CCAGCTCGATTCCCTGTGCAGTTCAGAGGGCAAGTGAACCCAACCAACAATGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272252.10
ENST00000410063.5
CDS-3UTR CCA 90 bp AGCCCCAGCCTTGTCACATACAATCTCTGTCCCTGGTGCAATGTCATCCTCACTTGGACAGGAGACAGGTaGCTGAGCCTAGCCCTGGAC +
Preference number: 4 (lower is better)
Translates to: SPSLVTYNLCPWCNVILTWTGDR*LSLALD
Trigger: GTCCAGGGCTAGGCTCAGCCACCTGTCTCCTGTCCA...AGTGAGGATGACATTGCACCAGGGACAGAGATTGTATGTGACAAGGCTGGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272252.10
CDS-3UTR CCA 90 bp GTGGAGAGATGGAGCCAACAGCAGCATGGGAGTCCCTGGCTAGGGTCAGGGCTTTCATTAGACATGGCCTaGAGCCAGTCACTGGAAAAG +
Preference number: 4 (lower is better)
Translates to: VERWSQQQHGSPWLGSGLSLDMA*SQSLEK
Trigger: CTTTTCCAGTGACTGGCTCCAGGCCATGTCTAATGA...AAGCCCTGACCCTAGCCAGGGACTCCCATGCTGCTGTTGGCTCCATCTCTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272252.10
ENST00000410063.5
CDS-3UTR CCA 90 bp ATTGTTGGTTGGGTTCACTTGCCCTCTGAACTGCACAGGGAATCGAGCTGGTCAGAGCCAACAGCAGCATaGGAGTCCCTGGCTAGGGTC +
Preference number: 4 (lower is better)
Translates to: IVGWVHLPSELHRESSWSEPTAA*ESLARV
Trigger: GACCCTAGCCAGGGACTCCCATGCTGCTGTTGGCTC...TGACCAGCTCGATTCCCTGTGCAGTTCAGAGGGCAAGTGAACCCAACCAACAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272252.10
ENST00000410063.5
3UTR CAA 72 bp CTCTCTCCTCACCCTAATAGCTCCTGTTTCCAGTGCTaGCCTGTCTTTCTTCCCAAGCGTTGGCCGGGCTGT +
Preference number: 4 (lower is better)
Translates to: LSPHPNSSCFQC*PVFLPKRWPGC
Trigger: ACAGCCCGGCCAACGCTTGGGAAGAAAGACAGGCAAGCACTGGAAACAGGAGCTATTAGGGTGAGGAGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272252.10
CDS-3UTR TCA 90 bp GAACTGCACAGGGAATCGAGCTGGTCATTAGACATGGCCTGGAGCCAGTCACTGCACTCTCAAGAGGTCTaGCTGCAGCTGGAACTTCTC +
Preference number: 4 (lower is better)
Translates to: ELHRESSWSLDMAWSQSLHSQEV*LQLELL
Trigger: GAGAAGTTCCAGCTGCAGTCAGACCTCTTGAGAGTG...CAGTGACTGGCTCCAGGCCATGTCTAATGACCAGCTCGATTCCCTGTGCAGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272252.10
ENST00000410063.5
CDS-3UTR TCA 90 bp ACCATTGAGATGGAAGTCCTGCAGGTGTTTTCCAAGCTCCACTGGCTTTCTCAGGAACTGGACGCCATTTaGCAGCACCCGAGGGGTCCA +
Preference number: 4 (lower is better)
Translates to: TIEMEVLQVFSKLHWLSQELDAI*QHPRGP
Trigger: TGGACCCCTCGGGTGCTGTCAAATGGCGTCCAGTTC...CTGAGAAAGCCAGTGGAGCTTGGAAAACACCTGCAGGACTTCCATCTCAATGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444351.5
CDS-3UTR TCA 90 bp GCCCCAGCCTTGTCACATACAATCTCTGTCCCTGGTGCAATGTCATCCTCACTGAATGGTTGGTCAGGTTaGCTGGTGTGGCCTGACTGG +
Preference number: 4 (lower is better)
Translates to: APALSHTISVPGAMSSSLNGWSG*LVWPDW
Trigger: CCAGTCAGGCCACACCAGTCAACCTGACCAACCATT...CAGTGAGGATGACATTGCACCAGGGACAGAGATTGTATGTGACAAGGCTGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272252.10
CDS-3UTR TCA 90 bp TTGTTGGTTGGGTTCACTTGCCCTCTGAACTGCACAGGGAATCGAGCTGGTCATGCATCAGGCCAGTTCTaGGTCTCCAGGCAGAAACCG +
Preference number: 4 (lower is better)
Translates to: LLVGFTCPLNCTGNRAGHASGQF*VSRQKP
Trigger: CGGTTTCTGCCTGGAGACTCAGAACTGGCCTGATGC...ATGACCAGCTCGATTCCCTGTGCAGTTCAGAGGGCAAGTGAACCCAACCAACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272252.10
ENST00000410063.5
CDS-3UTR TCA 90 bp GACATTGTTGGTTGGGTTCACTTGCCCTCTGAACTGCACAGGGAATCGAGCTGGGGTTCACTTGCCCTCTaGACTGCACAGGGAATCGAG +
Preference number: 4 (lower is better)
Translates to: DIVGWVHLPSELHRESSWGSLAL*TAQGIE
Trigger: CTCGATTCCCTGTGCAGTTCAGAGGGCAAGTGAACC...CCAGCTCGATTCCCTGTGCAGTTCAGAGGGCAAGTGAACCCAACCAACAATGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272252.10
ENST00000410063.5
CDS-3UTR TCA 90 bp GAACTGCACAGGGAATCGAGCTGGTCATTAGACATGGCCTGGAGCCAGTCACTGGGGTCAGGGCTTAGATaGCGACATTGTTGGTTGGGT +
Preference number: 4 (lower is better)
Translates to: ELHRESSWSLDMAWSQSLGSGLR*RHCWLG
Trigger: ACCCAACCAACAATGTCGTCATCTAAGCCCTGACCC...CAGTGACTGGCTCCAGGCCATGTCTAATGACCAGCTCGATTCCCTGTGCAGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272252.10
ENST00000410063.5
CDS-3UTR GCA 90 bp GAATCGAGCTGGTCATTAGACATGGCCTGGAGCCAGTCACTGGAAAAGGAAATCGGCGTGTGCAGCCACTaGCCGCTCTTCAAACTCCAG +
Preference number: 4 (lower is better)
Translates to: ESSWSLDMAWSQSLEKEIGVCSH*PLFKLQ
Trigger: CTGGAGTTTGAAGAGCGGGCAGTGGCTGCACACGCC...GATTTCCTTTTCCAGTGACTGGCTCCAGGCCATGTCTAATGACCAGCTCGATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272252.10
CDS-3UTR GCA 90 bp ACATTGTTGGTTGGGTTCACTTGCCCTCTGAACTGCACAGGGAATCGAGCTGGTGGAAAGTTTGGCGTGTaGAGCCACTGCCCGCTCTTC +
Preference number: 4 (lower is better)
Translates to: TLLVGFTCPLNCTGNRAGGKFGV*SHCPLF
Trigger: GAAGAGCGGGCAGTGGCTGCACACGCCAAACTTTCC...ACCAGCTCGATTCCCTGTGCAGTTCAGAGGGCAAGTGAACCCAACCAACAATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272252.10
ENST00000410063.5
CDS-3UTR GCA 90 bp ACATTGTTGGTTGGGTTCACTTGCCCTCTGAACTGCACAGGGAATCGAGCTGGTTCCGAGGCTCTCCCCTaGCTGTCTTTGACCTCTAGG +
Preference number: 4 (lower is better)
Translates to: TLLVGFTCPLNCTGNRAGSEALP*LSLTSR
Trigger: CCTAGAGGTCAAAGACAGGCAGGGGAGAGCCTCGGA...ACCAGCTCGATTCCCTGTGCAGTTCAGAGGGCAAGTGAACCCAACCAACAATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272252.10
ENST00000410063.5
CDS-3UTR GCA 90 bp CTTCCCAAGCGTTGGCCGGGCTGTGCTTTCTCAGTTAACCCAAAGGCTCTTGCATCAGGTCGAATGCAGTaGCTTGCACTGGGGCAACTT +
Preference number: 4 (lower is better)
Translates to: LPKRWPGCAFSVNPKALASGRMQ*LALGQL
Trigger: AAGTTGCCCCAGTGCAAGGCACTGCATTCGACCTGA...TGCAAGAGCCTTTGGGTTAACTGAGAAAGCACAGCCCGGCCAACGCTTGGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272252.10
CDS-3UTR GCA 90 bp GAACTGCACAGGGAATCGAGCTGGTCATTAGACATGGCCTGGAGCCAGTCACTGTGCCATCCAGGAAGTTaGCCGTGTAAAACTGGACCC +
Preference number: 4 (lower is better)
Translates to: ELHRESSWSLDMAWSQSLCHPGS*PCKTGP
Trigger: GGGTCCAGTTTTACACGGGCAACTTCCTGGATGGCA...CAGTGACTGGCTCCAGGCCATGTCTAATGACCAGCTCGATTCCCTGTGCAGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272252.10
ENST00000410063.5
CDS-3UTR GCA 90 bp ACAGGAGACAGGTGGCTGAGCCTAGCCCTGGACTGGATCATATCTTCACACTTCGCGGGGCTGATTGACTaGATCAGGCCAGTTCTGAGT +
Preference number: 4 (lower is better)
Translates to: TGDRWLSLALDWIISSHFAGLID*IRPVLS
Trigger: ACTCAGAACTGGCCTGATGCAGTCAATCAGCCCCGC...GAAGTGTGAAGATATGATCCAGTCCAGGGCTAGGCTCAGCCACCTGTCTCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272252.10
ENST00000410063.5
CDS-3UTR CCA 90 bp GTGGAGAGATGGAGCCAACAGCAGCATGGGAGTCCCTGGCTAGGGTCAGGGCTTAACTGCTCCAAAGTATaGCTGCTTTTGGAGGTATCC +
Preference number: 4 (lower is better)
Translates to: VERWSQQQHGSPWLGSGLNCSKV*LLLEVS
Trigger: GGATACCTCCAAAAGCAGCCATACTTTGGAGCAGTT...AAGCCCTGACCCTAGCCAGGGACTCCCATGCTGCTGTTGGCTCCATCTCTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272252.10
CDS-3UTR CCA 90 bp ACATTGTTGGTTGGGTTCACTTGCCCTCTGAACTGCACAGGGAATCGAGCTGGTCAGCATGGGAGTCCCTaGCTAGGGTCAGGGCTTAGA +
Preference number: 4 (lower is better)
Translates to: TLLVGFTCPLNCTGNRAGQHGSP*LGSGLR
Trigger: TCTAAGCCCTGACCCTAGCCAGGGACTCCCATGCTG...ACCAGCTCGATTCCCTGTGCAGTTCAGAGGGCAAGTGAACCCAACCAACAATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272252.10
ENST00000410063.5
CDS-3UTR CCA 90 bp ATTGTTGGTTGGGTTCACTTGCCCTCTGAACTGCACAGGGAATCGAGCTGGTCACAGCATGGGAGTCCCTaGCTAGGGTCAGGGCTTAGA +
Preference number: 4 (lower is better)
Translates to: IVGWVHLPSELHRESSWSQHGSP*LGSGLR
Trigger: TCTAAGCCCTGACCCTAGCCAGGGACTCCCATGCTG...TGACCAGCTCGATTCCCTGTGCAGTTCAGAGGGCAAGTGAACCCAACCAACAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272252.10
ENST00000410063.5
CDS-3UTR TCA 90 bp GACATTGTTGGTTGGGTTCACTTGCCCTCTGAACTGCACAGGGAATCGAGCTGGCCTGGCCTGCCAGGTTaGAGTAAGAATGGTTGGTCA +
Preference number: 4 (lower is better)
Translates to: DIVGWVHLPSELHRESSWPGLPG*SKNGWS
Trigger: TGACCAACCATTCTTACTTCAACCTGGCAGGCCAGG...CCAGCTCGATTCCCTGTGCAGTTCAGAGGGCAAGTGAACCCAACCAACAATGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272252.10
CDS-3UTR TCA 90 bp GAATCGAGCTGGTCATTAGACATGGCCTGGAGCCAGTCACTGGAAAAGGAAATCGGAAGCGGGGCTGATTaGCTGCATCAGGCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: ESSWSLDMAWSQSLEKEIGSGAD*LHQASS
Trigger: AGAACTGGCCTGATGCAGTCAATCAGCCCCGCTTCC...GATTTCCTTTTCCAGTGACTGGCTCCAGGCCATGTCTAATGACCAGCTCGATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272252.10
ENST00000410063.5
CDS-3UTR TCA 90 bp AGCCCCAGCCTTGTCACATACAATCTCTGTCCCTGGTGCAATGTCATCCTCACTACTCCAGAGTGCTGCTaGCAGTGGTTGGAGGTGAAG +
Preference number: 4 (lower is better)
Translates to: SPSLVTYNLCPWCNVILTTPECC*QWLEVK
Trigger: CTTCACCTCCAACCACTGTCAGCAGCACTCTGGAGT...AGTGAGGATGACATTGCACCAGGGACAGAGATTGTATGTGACAAGGCTGGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272252.10
CDS-3UTR GCA 90 bp GAATCGAGCTGGTCATTAGACATGGCCTGGAGCCAGTCACTGGAAAAGGAAATCGGAAAGTTTGGCGTGTaGAGCCACTGCCCGCTCTTC +
Preference number: 4 (lower is better)
Translates to: ESSWSLDMAWSQSLEKEIGKFGV*SHCPLF
Trigger: GAAGAGCGGGCAGTGGCTGCACACGCCAAACTTTCC...GATTTCCTTTTCCAGTGACTGGCTCCAGGCCATGTCTAATGACCAGCTCGATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272252.10
ENST00000410063.5
CDS-3UTR GCA 90 bp ACAGGAGACAGGTGGCTGAGCCTAGCCCTGGACTGGATCATATCTTCACACTTCTCAGGTCGAATGCAGTaGCTTGCACTGGGGCAACTT +
Preference number: 4 (lower is better)
Translates to: TGDRWLSLALDWIISSHFSGRMQ*LALGQL
Trigger: AAGTTGCCCCAGTGCAAGGCACTGCATTCGACCTGA...GAAGTGTGAAGATATGATCCAGTCCAGGGCTAGGCTCAGCCACCTGTCTCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272252.10
ENST00000410063.5
CDS-3UTR CCA 90 bp ACATTGTTGGTTGGGTTCACTTGCCCTCTGAACTGCACAGGGAATCGAGCTGGTTGCAGTGCCTTGCACTaGGGCAACTTCTCCTGTAGG +
Preference number: 4 (lower is better)
Translates to: TLLVGFTCPLNCTGNRAGCSALH*GNFSCR
Trigger: CCTACAGGAGAAGTTGCCCCAGTGCAAGGCACTGCA...ACCAGCTCGATTCCCTGTGCAGTTCAGAGGGCAAGTGAACCCAACCAACAATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272252.10
CDS-3UTR CCA 90 bp ACCATTGAGATGGAAGTCCTGCAGGTGTTTTCCAAGCTCCACTGGCTTTCTCAGGGACCCCGGGCTGGGTaGTGTATACTTCTAGTACCC +
Preference number: 4 (lower is better)
Translates to: TIEMEVLQVFSKLHWLSQGPRAG*CILLVP
Trigger: GGGTACTAGAAGTATACACCACCCAGCCCGGGGTCC...CTGAGAAAGCCAGTGGAGCTTGGAAAACACCTGCAGGACTTCCATCTCAATGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444351.5
CDS-3UTR CCA 90 bp ACATGGCCTGGAGCCAGTCACTGGAAAAGGAAATCAATACCCAGACTGATTCTCGAGCCAACAGCAGCATaGGAGTCCCTGGCTAGGGTC +
Preference number: 4 (lower is better)
Translates to: TWPGASHWKRKSIPRLILEPTAA*ESLARV
Trigger: GACCCTAGCCAGGGACTCCCATGCTGCTGTTGGCTC...GAGAATCAGTCTGGGTATTGATTTCCTTTTCCAGTGACTGGCTCCAGGCCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272252.10
ENST00000410063.5
CDS-3UTR CCA 90 bp GAATCGAGCTGGTCATTAGACATGGCCTGGAGCCAGTCACTGGAAAAGGAAATCGGCAGTGTGGAGAGATaGAGCCAACAGCAGCATGGG +
Preference number: 4 (lower is better)
Translates to: ESSWSLDMAWSQSLEKEIGSVER*SQQQHG
Trigger: CCCATGCTGCTGTTGGCTCCATCTCTCCACACTGCC...GATTTCCTTTTCCAGTGACTGGCTCCAGGCCATGTCTAATGACCAGCTCGATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272252.10
ENST00000410063.5
3UTR CAA 72 bp CAGGGCTTAGATGACGACATTGTTGGTTGGGTTCACTaGCCCTCTGAACTGCACAGGGAATCGAGCTGGTCA +
Preference number: 4 (lower is better)
Translates to: QGLDDDIVGWVH*PSELHRESSWS
Trigger: TGACCAGCTCGATTCCCTGTGCAGTTCAGAGGGCAAGTGAACCCAACCAACAATGTCGTCATCTAAGCCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272252.10
ENST00000410063.5
CDS-3UTR TCA 90 bp ACATTGTTGGTTGGGTTCACTTGCCCTCTGAACTGCACAGGGAATCGAGCTGGTCACTCTCAAGAGGTCTaGCTGCAGCTGGAACTTCTC +
Preference number: 4 (lower is better)
Translates to: TLLVGFTCPLNCTGNRAGHSQEV*LQLELL
Trigger: GAGAAGTTCCAGCTGCAGTCAGACCTCTTGAGAGTG...ACCAGCTCGATTCCCTGTGCAGTTCAGAGGGCAAGTGAACCCAACCAACAATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272252.10
ENST00000410063.5
CDS-3UTR TCA 90 bp GGAGCCAGTCACTGGAAAAGGAAATCAATACCCAGACTGATTCTCAGAACAGCCCTTCACCATCTGGACTaGTGCGCGAGAACTGGACGC +
Preference number: 4 (lower is better)
Translates to: GASHWKRKSIPRLILRTALHHLD*CARTGR
Trigger: GCGTCCAGTTCTCGCGCATCAGTCCAGATGGTGAAG...GGCTGTTCTGAGAATCAGTCTGGGTATTGATTTCCTTTTCCAGTGACTGGCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272252.10
CDS-3UTR TCA 90 bp AAAGAAGGAGCCCCAGCCTTGTCACATACAATCTCTGTCCCTGGTGCAATGTCACGCCCGCTTGCAGCATaGTGCACCCTTGCACAAAAA +
Preference number: 4 (lower is better)
Translates to: KEGAPALSHTISVPGAMSRPLAA*CTLAQK
Trigger: TTTTTGTGCAAGGGTGCATCATGCTGCAAGCGGGCG...TGACATTGCACCAGGGACAGAGATTGTATGTGACAAGGCTGGGGCTCCTTCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272252.10
CDS-3UTR TCA 90 bp ACCATTGAGATGGAAGTCCTGCAGGTGTTTTCCAAGCTCCACTGGCTTTCTCAGCGCCCGCTTGCAGCATaGTGCACCCTTGCACAAAAA +
Preference number: 4 (lower is better)
Translates to: TIEMEVLQVFSKLHWLSQRPLAA*CTLAQK
Trigger: TTTTTGTGCAAGGGTGCATCATGCTGCAAGCGGGCG...CTGAGAAAGCCAGTGGAGCTTGGAAAACACCTGCAGGACTTCCATCTCAATGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444351.5
CDS-3UTR TCA 90 bp GGAGCCAGTCACTGGAAAAGGAAATCAATACCCAGACTGATTCTCAGAACAGCCGGAAGCGGGGCTGATTaGCTGCATCAGGCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: GASHWKRKSIPRLILRTAGSGAD*LHQASS
Trigger: AGAACTGGCCTGATGCAGTCAATCAGCCCCGCTTCC...GGCTGTTCTGAGAATCAGTCTGGGTATTGATTTCCTTTTCCAGTGACTGGCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272252.10
ENST00000410063.5
CDS-3UTR GCA 90 bp GACATTGTTGGTTGGGTTCACTTGCCCTCTGAACTGCACAGGGAATCGAGCTGGCTCAAGAGGTCTGACTaGAGCTGGAACTTCTCCACT +
Preference number: 4 (lower is better)
Translates to: DIVGWVHLPSELHRESSWLKRSD*SWNFST
Trigger: AGTGGAGAAGTTCCAGCTGCAGTCAGACCTCTTGAG...CCAGCTCGATTCCCTGTGCAGTTCAGAGGGCAAGTGAACCCAACCAACAATGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272252.10
ENST00000410063.5
CDS-3UTR GCA 90 bp ACATTGTTGGTTGGGTTCACTTGCCCTCTGAACTGCACAGGGAATCGAGCTGGTCCTCTGACTCCTCCATaGAGACTGTTGGGTTCCTTG +
Preference number: 4 (lower is better)
Translates to: TLLVGFTCPLNCTGNRAGPLTPP*RLLGSL
Trigger: CAAGGAACCCAACAGTCTGCATGGAGGAGTCAGAGG...ACCAGCTCGATTCCCTGTGCAGTTCAGAGGGCAAGTGAACCCAACCAACAATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272252.10
CDS-3UTR GCA 90 bp GACATTGTTGGTTGGGTTCACTTGCCCTCTGAACTGCACAGGGAATCGAGCTGGTCTTGCCCTTTAATGTaGCATCCAGGAAGTTGCCCG +
Preference number: 4 (lower is better)
Translates to: DIVGWVHLPSELHRESSWSCPLM*HPGSCP
Trigger: CGGGCAACTTCCTGGATGGCACATTAAAGGGCAAGA...CCAGCTCGATTCCCTGTGCAGTTCAGAGGGCAAGTGAACCCAACCAACAATGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272252.10
ENST00000410063.5
CDS-3UTR GCA 90 bp ACATTGTTGGTTGGGTTCACTTGCCCTCTGAACTGCACAGGGAATCGAGCTGGTACTTGCCCTCTGAACTaGACAGGGAATCGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: TLLVGFTCPLNCTGNRAGTCPLN*TGNRAG
Trigger: ACCAGCTCGATTCCCTGTGCAGTTCAGAGGGCAAGT...ACCAGCTCGATTCCCTGTGCAGTTCAGAGGGCAAGTGAACCCAACCAACAATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272252.10
ENST00000410063.5
CDS-3UTR GCA 90 bp TTGTTGGTTGGGTTCACTTGCCCTCTGAACTGCACAGGGAATCGAGCTGGTCATTTGGTTGGGTTCACTTaGCCTCTGAACTGCACAGGG +
Preference number: 4 (lower is better)
Translates to: LLVGFTCPLNCTGNRAGHLVGFT*PLNCTG
Trigger: CCCTGTGCAGTTCAGAGGGCAAGTGAACCCAACCAA...ATGACCAGCTCGATTCCCTGTGCAGTTCAGAGGGCAAGTGAACCCAACCAACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272252.10
ENST00000410063.5
CDS-3UTR GCA 90 bp ACAGGAGACAGGTGGCTGAGCCTAGCCCTGGACTGGATCATATCTTCACACTTCAGCTCCTGTTTCCAGTaGTTGCCTGTCTTTCTTCCC +
Preference number: 4 (lower is better)
Translates to: TGDRWLSLALDWIISSHFSSCFQ*LPVFLP
Trigger: GGGAAGAAAGACAGGCAAGCACTGGAAACAGGAGCT...GAAGTGTGAAGATATGATCCAGTCCAGGGCTAGGCTCAGCCACCTGTCTCCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272252.10
CDS-3UTR CCA 90 bp GGAGCCAGTCACTGGAAAAGGAAATCAATACCCAGACTGATTCTCAGAACAGCCGCCATAGGGAAAGTTTaGCGTGTGCAGCCACTGCCC +
Preference number: 4 (lower is better)
Translates to: GASHWKRKSIPRLILRTAAIGKV*RVQPLP
Trigger: GGGCAGTGGCTGCACACGCCAAACTTTCCCTATGGC...GGCTGTTCTGAGAATCAGTCTGGGTATTGATTTCCTTTTCCAGTGACTGGCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272252.10
ENST00000410063.5
CDS-3UTR CCA 90 bp TTAGATGACGACATTGTTGGTTGGGTTCACTTGCCCTCTGAACTGCACAGGGAAGGACCCCGGGCTGGGTaGTGTATACTTCTAGTACCC +
Preference number: 4 (lower is better)
Translates to: LDDDIVGWVHLPSELHREGPRAG*CILLVP
Trigger: GGGTACTAGAAGTATACACCACCCAGCCCGGGGTCC...TTCCCTGTGCAGTTCAGAGGGCAAGTGAACCCAACCAACAATGTCGTCATCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272252.10
ENST00000410063.5
CDS-3UTR CCA 90 bp ATTGTTGGTTGGGTTCACTTGCCCTCTGAACTGCACAGGGAATCGAGCTGGTCATTGAACCAGGTGGTGTaGTCATACTCCTCACCAGGC +
Preference number: 4 (lower is better)
Translates to: IVGWVHLPSELHRESSWSLNQVV*SYSSPG
Trigger: GCCTGGTGAGGAGTATGACCACACCACCTGGTTCAA...TGACCAGCTCGATTCCCTGTGCAGTTCAGAGGGCAAGTGAACCCAACCAACAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272252.10
ENST00000410063.5
CDS-3UTR TCA 90 bp ACATGGCCTGGAGCCAGTCACTGGAAAAGGAAATCAATACCCAGACTGATTCTCTGCAGCCCCAGGAGATaGTGTCCACTCTCAAGAGGT +
Preference number: 4 (lower is better)
Translates to: TWPGASHWKRKSIPRLILCSPRR*CPLSRG
Trigger: ACCTCTTGAGAGTGGACATCATCTCCTGGGGCTGCA...GAGAATCAGTCTGGGTATTGATTTCCTTTTCCAGTGACTGGCTCCAGGCCATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272252.10
ENST00000410063.5
CDS-3UTR TCA 90 bp GTCAAAACCATTGAGATGGAAGTCCTGCAGGTGTTTTCCAAGCTCCACTGGCTTAATGGTTGGTCAGGTTaGCTGGTGTGGCCTGACTGG +
Preference number: 4 (lower is better)
Translates to: VKTIEMEVLQVFSKLHWLNGWSG*LVWPDW
Trigger: CCAGTCAGGCCACACCAGTCAACCTGACCAACCATT...AAGCCAGTGGAGCTTGGAAAACACCTGCAGGACTTCCATCTCAATGGTTTTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444351.5
CDS-3UTR TCA 90 bp ACATGGCCTGGAGCCAGTCACTGGAAAAGGAAATCAATACCCAGACTGATTCTCCGCCCGCTTGCAGCATaGTGCACCCTTGCACAAAAA +
Preference number: 4 (lower is better)
Translates to: TWPGASHWKRKSIPRLILRPLAA*CTLAQK
Trigger: TTTTTGTGCAAGGGTGCATCATGCTGCAAGCGGGCG...GAGAATCAGTCTGGGTATTGATTTCCTTTTCCAGTGACTGGCTCCAGGCCATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272252.10
ENST00000410063.5
CDS-3UTR GCA 90 bp GTGGTCAAAACCATTGAGATGGAAGTCCTGCAGGTGTTTTCCAAGCTCCACTGGCCTCTGACTCCTCCATaGAGACTGTTGGGTTCCTTG +
Preference number: 4 (lower is better)
Translates to: VVKTIEMEVLQVFSKLHWPLTPP*RLLGSL
Trigger: CAAGGAACCCAACAGTCTGCATGGAGGAGTCAGAGG...CCAGTGGAGCTTGGAAAACACCTGCAGGACTTCCATCTCAATGGTTTTGACCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444351.5
CDS-3UTR GCA 90 bp GAATCGAGCTGGTCATTAGACATGGCCTGGAGCCAGTCACTGGAAAAGGAAATCTGGGGAAGCCTGGCCTaGCAGGTTGAAGTAAGAATG +
Preference number: 4 (lower is better)
Translates to: ESSWSLDMAWSQSLEKEIWGSLA*QVEVRM
Trigger: CATTCTTACTTCAACCTGGCAGGCCAGGCTTCCCCA...GATTTCCTTTTCCAGTGACTGGCTCCAGGCCATGTCTAATGACCAGCTCGATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272252.10
CDS-3UTR GCA 90 bp GTGGTCAAAACCATTGAGATGGAAGTCCTGCAGGTGTTTTCCAAGCTCCACTGGTCGAATGCAGTGCCTTaGACTGGGGCAACTTCTCCT +
Preference number: 4 (lower is better)
Translates to: VVKTIEMEVLQVFSKLHWSNAVP*TGATSP
Trigger: AGGAGAAGTTGCCCCAGTGCAAGGCACTGCATTCGA...CCAGTGGAGCTTGGAAAACACCTGCAGGACTTCCATCTCAATGGTTTTGACCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000444351.5
CDS-3UTR GCA 90 bp GGAGCCAGTCACTGGAAAAGGAAATCAATACCCAGACTGATTCTCAGAACAGCCCTTTCTCAGGTCGAATaGAGTGCCTTGCACTGGGGC +
Preference number: 4 (lower is better)
Translates to: GASHWKRKSIPRLILRTALSQVE*SALHWG
Trigger: GCCCCAGTGCAAGGCACTGCATTCGACCTGAGAAAG...GGCTGTTCTGAGAATCAGTCTGGGTATTGATTTCCTTTTCCAGTGACTGGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272252.10
ENST00000410063.5
CDS-3UTR GCA 90 bp GACATTGTTGGTTGGGTTCACTTGCCCTCTGAACTGCACAGGGAATCGAGCTGGTTGAGATGGAAGTCCTaGAGGTGTTTTCCAAGCTCC +
Preference number: 4 (lower is better)
Translates to: DIVGWVHLPSELHRESSWLRWKS*RCFPSS
Trigger: GGAGCTTGGAAAACACCTGCAGGACTTCCATCTCAA...CCAGCTCGATTCCCTGTGCAGTTCAGAGGGCAAGTGAACCCAACCAACAATGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272252.10
ENST00000410063.5
CDS-3UTR GCA 90 bp ACAGGAGACAGGTGGCTGAGCCTAGCCCTGGACTGGATCATATCTTCACACTTCTTGAGATGGAAGTCCTaGAGGTGTTTTCCAAGCTCC +
Preference number: 4 (lower is better)
Translates to: TGDRWLSLALDWIISSHFLRWKS*RCFPSS
Trigger: GGAGCTTGGAAAACACCTGCAGGACTTCCATCTCAA...GAAGTGTGAAGATATGATCCAGTCCAGGGCTAGGCTCAGCCACCTGTCTCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272252.10
ENST00000410063.5
CDS-3UTR GCA 90 bp GAACTGCACAGGGAATCGAGCTGGTCATTAGACATGGCCTGGAGCCAGTCACTGAGACAGCTCCATTCTTaGCCTTTAATGTGCCATCCA +
Preference number: 4 (lower is better)
Translates to: ELHRESSWSLDMAWSQSLRQLHS*PLMCHP
Trigger: TGGATGGCACATTAAAGGGCAAGAATGGAGCTGTCT...CAGTGACTGGCTCCAGGCCATGTCTAATGACCAGCTCGATTCCCTGTGCAGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272252.10
ENST00000410063.5
CDS-3UTR CCA 90 bp AAAGAAGGAGCCCCAGCCTTGTCACATACAATCTCTGTCCCTGGTGCAATGTCAGCCTTCTTCACCATCTaGACTGATGCGCGAGAACTG +
Preference number: 4 (lower is better)
Translates to: KEGAPALSHTISVPGAMSAFFTI*TDAREL
Trigger: CAGTTCTCGCGCATCAGTCCAGATGGTGAAGAAGGC...TGACATTGCACCAGGGACAGAGATTGTATGTGACAAGGCTGGGGCTCCTTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272252.10
CDS-3UTR CCA 90 bp GTGGAGAGATGGAGCCAACAGCAGCATGGGAGTCCCTGGCTAGGGTCAGGGCTTTTCAGACAGAAATTGTaGTCAAAACCATTGAGATGG +
Preference number: 4 (lower is better)
Translates to: VERWSQQQHGSPWLGSGLFRQKL*SKPLRW
Trigger: CCATCTCAATGGTTTTGACCACAATTTCTGTCTGAA...AAGCCCTGACCCTAGCCAGGGACTCCCATGCTGCTGTTGGCTCCATCTCTCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272252.10
ENST00000410063.5
CDS-3UTR CCA 90 bp ACCATTGAGATGGAAGTCCTGCAGGTGTTTTCCAAGCTCCACTGGCTTTCTCAGAACTGGACCCCGGGCTaGGTGGTGTATACTTCTAGT +
Preference number: 4 (lower is better)
Translates to: TIEMEVLQVFSKLHWLSQNWTPG*VVYTSS
Trigger: ACTAGAAGTATACACCACCCAGCCCGGGGTCCAGTT...CTGAGAAAGCCAGTGGAGCTTGGAAAACACCTGCAGGACTTCCATCTCAATGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444351.5
CDS-3UTR CCA 90 bp ACAGGAGACAGGTGGCTGAGCCTAGCCCTGGACTGGATCATATCTTCACACTTCTCATTAGACATGGCCTaGAGCCAGTCACTGGAAAAG +
Preference number: 4 (lower is better)
Translates to: TGDRWLSLALDWIISSHFSLDMA*SQSLEK
Trigger: CTTTTCCAGTGACTGGCTCCAGGCCATGTCTAATGA...GAAGTGTGAAGATATGATCCAGTCCAGGGCTAGGCTCAGCCACCTGTCTCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272252.10
ENST00000410063.5
CDS-3UTR CCA 90 bp GAATCGAGCTGGTCATTAGACATGGCCTGGAGCCAGTCACTGGAAAAGGAAATCCACAGGGAATCGAGCTaGTCATTAGACATGGCCTGG +
Preference number: 4 (lower is better)
Translates to: ESSWSLDMAWSQSLEKEIHRESS*SLDMAW
Trigger: CCAGGCCATGTCTAATGACCAGCTCGATTCCCTGTG...GATTTCCTTTTCCAGTGACTGGCTCCAGGCCATGTCTAATGACCAGCTCGATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272252.10
ENST00000410063.5
CDS-3UTR CCA 90 bp ACATTGTTGGTTGGGTTCACTTGCCCTCTGAACTGCACAGGGAATCGAGCTGGTAAGAAAGAGGCAGTGTaGAGAGATGGAGCCAACAGC +
Preference number: 4 (lower is better)
Translates to: TLLVGFTCPLNCTGNRAGKKEAV*RDGANS
Trigger: GCTGTTGGCTCCATCTCTCCACACTGCCTCTTTCTT...ACCAGCTCGATTCCCTGTGCAGTTCAGAGGGCAAGTGAACCCAACCAACAATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272252.10
ENST00000410063.5
CDS-3UTR CCA 90 bp ACATGGCCTGGAGCCAGTCACTGGAAAAGGAAATCAATACCCAGACTGATTCTCTGTTGCCCAGTGCAGTaGCATGATCTCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: TWPGASHWKRKSIPRLILCCPVQ*HDLGSL
Trigger: CAGTGAGCCGAGATCATGCCACTGCACTGGGCAACA...GAGAATCAGTCTGGGTATTGATTTCCTTTTCCAGTGACTGGCTCCAGGCCATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272252.10
CDS-3UTR CCA 90 bp ACCATTGAGATGGAAGTCCTGCAGGTGTTTTCCAAGCTCCACTGGCTTTCTCAGTGCAGTGCCTTGCACTaGGGCAACTTCTCCTGCAAA +
Preference number: 4 (lower is better)
Translates to: TIEMEVLQVFSKLHWLSQCSALH*GNFSCK
Trigger: TTTGCAGGAGAAGTTGCCCCAGTGCAAGGCACTGCA...CTGAGAAAGCCAGTGGAGCTTGGAAAACACCTGCAGGACTTCCATCTCAATGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444351.5
CDS-3UTR TCA 90 bp AAAGAAGGAGCCCCAGCCTTGTCACATACAATCTCTGTCCCTGGTGCAATGTCATTGTTAATGGCCAGGTaGTACTCCTTCCCATCCACC +
Preference number: 4 (lower is better)
Translates to: KEGAPALSHTISVPGAMSLLMAR*YSFPST
Trigger: GGTGGATGGGAAGGAGTATCACCTGGCCATTAACAA...TGACATTGCACCAGGGACAGAGATTGTATGTGACAAGGCTGGGGCTCCTTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272252.10
CDS-3UTR TCA 90 bp GTCAAAACCATTGAGATGGAAGTCCTGCAGGTGTTTTCCAAGCTCCACTGGCTTCCTGGCCTGCCAGGTTaGAGTAAGAATGGTTGGTCA +
Preference number: 4 (lower is better)
Translates to: VKTIEMEVLQVFSKLHWLPGLPG*SKNGWS
Trigger: TGACCAACCATTCTTACTTCAACCTGGCAGGCCAGG...AAGCCAGTGGAGCTTGGAAAACACCTGCAGGACTTCCATCTCAATGGTTTTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444351.5
CDS-3UTR TCA 90 bp ATTGTTGGTTGGGTTCACTTGCCCTCTGAACTGCACAGGGAATCGAGCTGGTCATGTGGTCAAAACCATTaGGATGGAAGTCCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: IVGWVHLPSELHRESSWSCGQNH*DGSPAG
Trigger: ACCTGCAGGACTTCCATCTCAATGGTTTTGACCACA...TGACCAGCTCGATTCCCTGTGCAGTTCAGAGGGCAAGTGAACCCAACCAACAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272252.10
ENST00000410063.5
CDS-3UTR TCA 90 bp TTGTTGGTTGGGTTCACTTGCCCTCTGAACTGCACAGGGAATCGAGCTGGTCATAAGCCACAGAAAACTTaGACCAGGTGGTGTGGTCAT +
Preference number: 4 (lower is better)
Translates to: LLVGFTCPLNCTGNRAGHKPQKT*TRWCGH
Trigger: ATGACCACACCACCTGGTTCAAGTTTTCTGTGGCTT...ATGACCAGCTCGATTCCCTGTGCAGTTCAGAGGGCAAGTGAACCCAACCAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272252.10
ENST00000410063.5
CDS-3UTR TCA 90 bp ATTGTTGGTTGGGTTCACTTGCCCTCTGAACTGCACAGGGAATCGAGCTGGTCAAAGCCACAGAAAACTTaGACCAGGTGGTGTGGTCAT +
Preference number: 4 (lower is better)
Translates to: IVGWVHLPSELHRESSWSKPQKT*TRWCGH
Trigger: ATGACCACACCACCTGGTTCAAGTTTTCTGTGGCTT...TGACCAGCTCGATTCCCTGTGCAGTTCAGAGGGCAAGTGAACCCAACCAACAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272252.10
ENST00000410063.5
CDS-3UTR TCA 90 bp GACATTGTTGGTTGGGTTCACTTGCCCTCTGAACTGCACAGGGAATCGAGCTGGAATCAATACCCAGACTaGTTCTCAGAACAGCCACCA +
Preference number: 4 (lower is better)
Translates to: DIVGWVHLPSELHRESSWNQYPD*FSEQPP
Trigger: TGGTGGCTGTTCTGAGAATCAGTCTGGGTATTGATT...CCAGCTCGATTCCCTGTGCAGTTCAGAGGGCAAGTGAACCCAACCAACAATGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272252.10
ENST00000410063.5
CDS-3UTR GCA 90 bp TGGTGTATACTTCTAGTACCCGCCCGCTTGCAGCATGATGCACCCTTGCACAAAGCTCCAAAGTATGGCTaGTTTTGGAGGTATCCTTCC +
Preference number: 4 (lower is better)
Translates to: WCILLVPARLQHDAPLHKAPKYG*FWRYPS
Trigger: GGAAGGATACCTCCAAAAGCAGCCATACTTTGGAGC...TTTGTGCAAGGGTGCATCATGCTGCAAGCGGGCGGGTACTAGAAGTATACACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444351.5
CDS-3UTR GCA 90 bp AAGGAGCCCCAGCCTTGTCACATACAATCTCTGTCCCTGGTGCAATGTCATCCTCACCCTCCCAATAACTaGTCCAAAGTATGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: KEPQPCHIQSLSLVQCHPHPPNN*SKVWLL
Trigger: AAGCAGCCATACTTTGGAGCAGTTATTGGGAGGGTG...AGGATGACATTGCACCAGGGACAGAGATTGTATGTGACAAGGCTGGGGCTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272252.10
CDS-3UTR GCA 90 bp GGAGCCAGTCACTGGAAAAGGAAATCAATACCCAGACTGATTCTCAGAACAGCCTCGAATGCAGTGCCTTaGACTGGGGCAACTTCTCCT +
Preference number: 4 (lower is better)
Translates to: GASHWKRKSIPRLILRTASNAVP*TGATSP
Trigger: AGGAGAAGTTGCCCCAGTGCAAGGCACTGCATTCGA...GGCTGTTCTGAGAATCAGTCTGGGTATTGATTTCCTTTTCCAGTGACTGGCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272252.10
ENST00000410063.5
CDS-3UTR GCA 90 bp TTAGATGACGACATTGTTGGTTGGGTTCACTTGCCCTCTGAACTGCACAGGGAATGCCATCCAGGAAGTTaGCCGTGTAAAACTGGACCC +
Preference number: 4 (lower is better)
Translates to: LDDDIVGWVHLPSELHRECHPGS*PCKTGP
Trigger: GGGTCCAGTTTTACACGGGCAACTTCCTGGATGGCA...TTCCCTGTGCAGTTCAGAGGGCAAGTGAACCCAACCAACAATGTCGTCATCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272252.10
ENST00000410063.5
CDS-3UTR GCA 90 bp GGAGCCAGTCACTGGAAAAGGAAATCAATACCCAGACTGATTCTCAGAACAGCCACTTGCCCTCTGAACTaGACAGGGAATCGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: GASHWKRKSIPRLILRTATCPLN*TGNRAG
Trigger: ACCAGCTCGATTCCCTGTGCAGTTCAGAGGGCAAGT...GGCTGTTCTGAGAATCAGTCTGGGTATTGATTTCCTTTTCCAGTGACTGGCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272252.10
ENST00000410063.5
CDS-3UTR GCA 90 bp ACATGGCCTGGAGCCAGTCACTGGAAAAGGAAATCAATACCCAGACTGATTCTCTTGGTTGGGTTCACTTaGCCTCTGAACTGCACAGGG +
Preference number: 4 (lower is better)
Translates to: TWPGASHWKRKSIPRLILLVGFT*PLNCTG
Trigger: CCCTGTGCAGTTCAGAGGGCAAGTGAACCCAACCAA...GAGAATCAGTCTGGGTATTGATTTCCTTTTCCAGTGACTGGCTCCAGGCCATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272252.10
ENST00000410063.5
CDS-3UTR CCA 90 bp GTCAAAACCATTGAGATGGAAGTCCTGCAGGTGTTTTCCAAGCTCCACTGGCTTGCCTTCTTCACCATCTaGACTGATGCGCGAGAACTG +
Preference number: 4 (lower is better)
Translates to: VKTIEMEVLQVFSKLHWLAFFTI*TDAREL
Trigger: CAGTTCTCGCGCATCAGTCCAGATGGTGAAGAAGGC...AAGCCAGTGGAGCTTGGAAAACACCTGCAGGACTTCCATCTCAATGGTTTTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444351.5
CDS-3UTR CCA 90 bp AAGGAGCCCCAGCCTTGTCACATACAATCTCTGTCCCTGGTGCAATGTCATCCTATGGTCATTTATATTTaGGGAAGCCTGGCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: KEPQPCHIQSLSLVQCHPMVIYI*GSLACQ
Trigger: CTGGCAGGCCAGGCTTCCCCAAATATAAATGACCAT...AGGATGACATTGCACCAGGGACAGAGATTGTATGTGACAAGGCTGGGGCTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272252.10
CDS-3UTR CCA 90 bp GGAGCCAGTCACTGGAAAAGGAAATCAATACCCAGACTGATTCTCAGAACAGCCAACTGGACCCCGGGCTaGGTGGTGTATACTTCTAGT +
Preference number: 4 (lower is better)
Translates to: GASHWKRKSIPRLILRTANWTPG*VVYTSS
Trigger: ACTAGAAGTATACACCACCCAGCCCGGGGTCCAGTT...GGCTGTTCTGAGAATCAGTCTGGGTATTGATTTCCTTTTCCAGTGACTGGCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272252.10
ENST00000410063.5
CDS-3UTR CCA 90 bp TTAGATGACGACATTGTTGGTTGGGTTCACTTGCCCTCTGAACTGCACAGGGAATTGAACCAGGTGGTGTaGTCATACTCCTCACCAGGC +
Preference number: 4 (lower is better)
Translates to: LDDDIVGWVHLPSELHRELNQVV*SYSSPG
Trigger: GCCTGGTGAGGAGTATGACCACACCACCTGGTTCAA...TTCCCTGTGCAGTTCAGAGGGCAAGTGAACCCAACCAACAATGTCGTCATCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272252.10
ENST00000410063.5
CDS-3UTR CCA 90 bp ACATTGTTGGTTGGGTTCACTTGCCCTCTGAACTGCACAGGGAATCGAGCTGGTAGCCTAGCCCTGGACTaGATCATATCTTCACACTTC +
Preference number: 4 (lower is better)
Translates to: TLLVGFTCPLNCTGNRAGSLALD*IISSHF
Trigger: GAAGTGTGAAGATATGATCCAGTCCAGGGCTAGGCT...ACCAGCTCGATTCCCTGTGCAGTTCAGAGGGCAAGTGAACCCAACCAACAATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272252.10
ENST00000410063.5
CDS-3UTR CCA 90 bp TTAGATGACGACATTGTTGGTTGGGTTCACTTGCCCTCTGAACTGCACAGGGAACACAGGGAATCGAGCTaGTCATTAGACATGGCCTGG +
Preference number: 4 (lower is better)
Translates to: LDDDIVGWVHLPSELHREHRESS*SLDMAW
Trigger: CCAGGCCATGTCTAATGACCAGCTCGATTCCCTGTG...TTCCCTGTGCAGTTCAGAGGGCAAGTGAACCCAACCAACAATGTCGTCATCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272252.10
ENST00000410063.5
CDS-3UTR CCA 90 bp AAGGAGCCCCAGCCTTGTCACATACAATCTCTGTCCCTGGTGCAATGTCATCCTGACGACATTGTTGGTTaGGTTCACTTGCCCTCTGAA +
Preference number: 4 (lower is better)
Translates to: KEPQPCHIQSLSLVQCHPDDIVG*VHLPSE
Trigger: TTCAGAGGGCAAGTGAACCCAACCAACAATGTCGTC...AGGATGACATTGCACCAGGGACAGAGATTGTATGTGACAAGGCTGGGGCTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272252.10
CDS-3UTR CCA 90 bp GGAGCCAGTCACTGGAAAAGGAAATCAATACCCAGACTGATTCTCAGAACAGCCTGCAGTGCCTTGCACTaGGGCAACTTCTCCTTCCAA +
Preference number: 4 (lower is better)
Translates to: GASHWKRKSIPRLILRTACSALH*GNFSFQ
Trigger: TTGGAAGGAGAAGTTGCCCCAGTGCAAGGCACTGCA...GGCTGTTCTGAGAATCAGTCTGGGTATTGATTTCCTTTTCCAGTGACTGGCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410063.5
CDS-3UTR TCA 90 bp ACAGAAATTGTGGTCAAAACCATTGAGATGGAAGTCCTGCAGGTGTTTTCCAAGCTTCACCATCTGGACTaGTGCGCGAGAACTGGACGC +
Preference number: 4 (lower is better)
Translates to: TEIVVKTIEMEVLQVFSKLHHLD*CARTGR
Trigger: GCGTCCAGTTCTCGCGCATCAGTCCAGATGGTGAAG...CTTGGAAAACACCTGCAGGACTTCCATCTCAATGGTTTTGACCACAATTTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444351.5
CDS-3UTR TCA 90 bp TTGTTGGTTGGGTTCACTTGCCCTCTGAACTGCACAGGGAATCGAGCTGGTCATAGGGTGAGGCTAATGTaGCATTTGAAAACTCCAGAG +
Preference number: 4 (lower is better)
Translates to: LLVGFTCPLNCTGNRAGHRVRLM*HLKTPE
Trigger: CTCTGGAGTTTTCAAATGTCACATTAGCCTCACCCT...ATGACCAGCTCGATTCCCTGTGCAGTTCAGAGGGCAAGTGAACCCAACCAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272252.10
CDS-3UTR GCA 90 bp ACAGAAATTGTGGTCAAAACCATTGAGATGGAAGTCCTGCAGGTGTTTTCCAAGTCCGAGGCTCTCCCCTaGCTGTCTTTGACCTCTAGG +
Preference number: 4 (lower is better)
Translates to: TEIVVKTIEMEVLQVFSKSEALP*LSLTSR
Trigger: CCTAGAGGTCAAAGACAGGCAGGGGAGAGCCTCGGA...CTTGGAAAACACCTGCAGGACTTCCATCTCAATGGTTTTGACCACAATTTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000444351.5
CDS-3UTR GCA 90 bp GTGGTCAAAACCATTGAGATGGAAGTCCTGCAGGTGTTTTCCAAGCTCCACTGGCACCCTCCCAATAACTaGTCCAAAGTATGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: VVKTIEMEVLQVFSKLHWHPPNN*SKVWLL
Trigger: AAGCAGCCATACTTTGGAGCAGTTATTGGGAGGGTG...CCAGTGGAGCTTGGAAAACACCTGCAGGACTTCCATCTCAATGGTTTTGACCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444351.5
CDS-3UTR GCA 90 bp GGAGCCAGTCACTGGAAAAGGAAATCAATACCCAGACTGATTCTCAGAACAGCCGGCCTGACTGGCTTGTaGTCTGTAGTTGACTATGAG +
Preference number: 4 (lower is better)
Translates to: GASHWKRKSIPRLILRTAGLTGL*SVVDYE
Trigger: CTCATAGTCAACTACAGAGCACAAGCCAGTCAGGCC...GGCTGTTCTGAGAATCAGTCTGGGTATTGATTTCCTTTTCCAGTGACTGGCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272252.10
CDS-3UTR GCA 90 bp GGAGCCAGTCACTGGAAAAGGAAATCAATACCCAGACTGATTCTCAGAACAGCCTCTTGCCCTTTAATGTaGCATCCAGGAAGTTGCCCG +
Preference number: 4 (lower is better)
Translates to: GASHWKRKSIPRLILRTASCPLM*HPGSCP
Trigger: CGGGCAACTTCCTGGATGGCACATTAAAGGGCAAGA...GGCTGTTCTGAGAATCAGTCTGGGTATTGATTTCCTTTTCCAGTGACTGGCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272252.10
ENST00000410063.5
CDS-3UTR GCA 90 bp TTGTTGGTTGGGTTCACTTGCCCTCTGAACTGCACAGGGAATCGAGCTGGTCATAGACAGCTCCATTCTTaGCCTTTAATGTGCCATCCA +
Preference number: 4 (lower is better)
Translates to: LLVGFTCPLNCTGNRAGHRQLHS*PLMCHP
Trigger: TGGATGGCACATTAAAGGGCAAGAATGGAGCTGTCT...ATGACCAGCTCGATTCCCTGTGCAGTTCAGAGGGCAAGTGAACCCAACCAACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272252.10
ENST00000410063.5
CDS-3UTR GCA 90 bp ACATGGCCTGGAGCCAGTCACTGGAAAAGGAAATCAATACCCAGACTGATTCTCCGAGTTTTGCTCTGTTaGCCAGTGCAGTGGCATGAT +
Preference number: 4 (lower is better)
Translates to: TWPGASHWKRKSIPRLILRVLLC*PVQWHD
Trigger: ATCATGCCACTGCACTGGGCAACAGAGCAAAACTCG...GAGAATCAGTCTGGGTATTGATTTCCTTTTCCAGTGACTGGCTCCAGGCCATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272252.10
CDS-3UTR CCA 90 bp GAACTGCACAGGGAATCGAGCTGGTCATTAGACATGGCCTGGAGCCAGTCACTGTCAAAACCATTGAGATaGAAGTCCTGCAGGTGTTTT +
Preference number: 4 (lower is better)
Translates to: ELHRESSWSLDMAWSQSLSKPLR*KSCRCF
Trigger: AAAACACCTGCAGGACTTCCATCTCAATGGTTTTGA...CAGTGACTGGCTCCAGGCCATGTCTAATGACCAGCTCGATTCCCTGTGCAGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272252.10
ENST00000410063.5
CDS-3UTR CCA 90 bp GAATCGAGCTGGTCATTAGACATGGCCTGGAGCCAGTCACTGGAAAAGGAAATCCCTGGAGCCAGTCACTaGAAAAGGAAATCAATACCC +
Preference number: 4 (lower is better)
Translates to: ESSWSLDMAWSQSLEKEIPGASH*KRKSIP
Trigger: GGGTATTGATTTCCTTTTCCAGTGACTGGCTCCAGG...GATTTCCTTTTCCAGTGACTGGCTCCAGGCCATGTCTAATGACCAGCTCGATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272252.10
ENST00000410063.5
CDS-3UTR CCA 90 bp TTAGATGACGACATTGTTGGTTGGGTTCACTTGCCCTCTGAACTGCACAGGGAAAAGAAAGAGGCAGTGTaGAGAGATGGAGCCAACAGC +
Preference number: 4 (lower is better)
Translates to: LDDDIVGWVHLPSELHREKKEAV*RDGANS
Trigger: GCTGTTGGCTCCATCTCTCCACACTGCCTCTTTCTT...TTCCCTGTGCAGTTCAGAGGGCAAGTGAACCCAACCAACAATGTCGTCATCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272252.10
ENST00000410063.5
CDS-3UTR TCA 90 bp TTAGATGACGACATTGTTGGTTGGGTTCACTTGCCCTCTGAACTGCACAGGGAACTTTATCAAACCCTCTaGCTCCTCCATGCAGACTGT +
Preference number: 4 (lower is better)
Translates to: LDDDIVGWVHLPSELHRELYQTL*LLHADC
Trigger: ACAGTCTGCATGGAGGAGTCAGAGGGTTTGATAAAG...TTCCCTGTGCAGTTCAGAGGGCAAGTGAACCCAACCAACAATGTCGTCATCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272252.10
CDS-3UTR GCA 90 bp TTAGACATGGCCTGGAGCCAGTCACTGGAAAAGGAAATCAATACCCAGACTGATCTCAAGAGGTCTGACTaGAGCTGGAACTTCTCCACT +
Preference number: 4 (lower is better)
Translates to: LDMAWSQSLEKEINTQTDLKRSD*SWNFST
Trigger: AGTGGAGAAGTTCCAGCTGCAGTCAGACCTCTTGAG...ATCAGTCTGGGTATTGATTTCCTTTTCCAGTGACTGGCTCCAGGCCATGTCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272252.10
ENST00000410063.5
CDS-3UTR GCA 90 bp ACATGGCCTGGAGCCAGTCACTGGAAAAGGAAATCAATACCCAGACTGATTCTCGCTCCAAAGTATGGCTaGTTTTGGAGGTATCCTTCC +
Preference number: 4 (lower is better)
Translates to: TWPGASHWKRKSIPRLILAPKYG*FWRYPS
Trigger: GGAAGGATACCTCCAAAAGCAGCCATACTTTGGAGC...GAGAATCAGTCTGGGTATTGATTTCCTTTTCCAGTGACTGGCTCCAGGCCATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272252.10
CDS-3UTR GCA 90 bp GGAGCCAGTCACTGGAAAAGGAAATCAATACCCAGACTGATTCTCAGAACAGCCATGTCATCCTCACTGTaGTGTGAAAGGCAAGGCTCT +
Preference number: 4 (lower is better)
Translates to: GASHWKRKSIPRLILRTAMSSSL*CERQGS
Trigger: AGAGCCTTGCCTTTCACAGCACAGTGAGGATGACAT...GGCTGTTCTGAGAATCAGTCTGGGTATTGATTTCCTTTTCCAGTGACTGGCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272252.10
CDS-3UTR CCA 90 bp AAAGAAGGAGCCCCAGCCTTGTCACATACAATCTCTGTCCCTGGTGCAATGTCAAAGTATGGCTGCTTTTaGAGGTATCCTTCCAACTCG +
Preference number: 4 (lower is better)
Translates to: KEGAPALSHTISVPGAMSKYGCF*RYPSNS
Trigger: CGAGTTGGAAGGATACCTCCAAAAGCAGCCATACTT...TGACATTGCACCAGGGACAGAGATTGTATGTGACAAGGCTGGGGCTCCTTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272252.10
CDS-3UTR CCA 90 bp ACTGGCTTTCTCAGGTCGAATGCAGTGCCTTGCACTGGGGCAACTTCTCCTGCATTCAGACAGAAATTGTaGTCAAAACCATTGAGATGG +
Preference number: 4 (lower is better)
Translates to: TGFLRSNAVPCTGATSPAFRQKL*SKPLRW
Trigger: CCATCTCAATGGTTTTGACCACAATTTCTGTCTGAA...TGCAGGAGAAGTTGCCCCAGTGCAAGGCACTGCATTCGACCTGAGAAAGCCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444351.5
CDS-3UTR CCA 90 bp GGAGCCAGTCACTGGAAAAGGAAATCAATACCCAGACTGATTCTCAGAACAGCCAGAAACCGGAGTGCTTaGGATAGACAGCTCCATTCT +
Preference number: 4 (lower is better)
Translates to: GASHWKRKSIPRLILRTARNRSA*DRQLHS
Trigger: AGAATGGAGCTGTCTATCCCAAGCACTCCGGTTTCT...GGCTGTTCTGAGAATCAGTCTGGGTATTGATTTCCTTTTCCAGTGACTGGCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272252.10
ENST00000410063.5
CDS-3UTR CCA 90 bp GGAGCCAGTCACTGGAAAAGGAAATCAATACCCAGACTGATTCTCAGAACAGCCCCTGGAGCCAGTCACTaGAAAAGGAAATCAATACCC +
Preference number: 4 (lower is better)
Translates to: GASHWKRKSIPRLILRTAPGASH*KRKSIP
Trigger: GGGTATTGATTTCCTTTTCCAGTGACTGGCTCCAGG...GGCTGTTCTGAGAATCAGTCTGGGTATTGATTTCCTTTTCCAGTGACTGGCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000272252.10
ENST00000410063.5
CDS-3UTR CCA 90 bp ACATGGCCTGGAGCCAGTCACTGGAAAAGGAAATCAATACCCAGACTGATTCTCGACGACATTGTTGGTTaGGTTCACTTGCCCTCTGAA +
Preference number: 4 (lower is better)
Translates to: TWPGASHWKRKSIPRLILDDIVG*VHLPSE
Trigger: TTCAGAGGGCAAGTGAACCCAACCAACAATGTCGTC...GAGAATCAGTCTGGGTATTGATTTCCTTTTCCAGTGACTGGCTCCAGGCCATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272252.10
ENST00000410063.5
CDS-3UTR TCA 90 bp GATTGGCCTGGTTTATTCTACTATAATAAGGAAGTAGCAGCACTCACATGTGAACTTCACCATCTGGACTaGTGCGCGAGAACTGGACGC +
Preference number: 4 (lower is better)
Translates to: DWPGLFYYNKEVAALTCELHHLD*CARTGR
Trigger: GCGTCCAGTTCTCGCGCATCAGTCCAGATGGTGAAG...TTCACATGTGAGTGCTGCTACTTCCTTATTATAGTAGAATAAACCAGGCCAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434934.1
CDS-3UTR TCA 90 bp TTGGAAGATTGGCCTGGTTTATTCTACTATAATAAGGAAGTAGCAGCACTCACAGCATCAGGCCAGTTCTaGGTCTCCAGGCAGAAACCG +
Preference number: 4 (lower is better)
Translates to: LEDWPGLFYYNKEVAALTASGQF*VSRQKP
Trigger: CGGTTTCTGCCTGGAGACTCAGAACTGGCCTGATGC...TGTGAGTGCTGCTACTTCCTTATTATAGTAGAATAAACCAGGCCAATCTTCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434934.1
CDS-3UTR TCA 90 bp AGCCCCAGCCTTGTCACATACAATCTCTGTCCCTGGTGCAATGTCATCCTCACTCCATCACTGATACTTTaGTTGTCTAGGAAAGAAGGA +
Preference number: 4 (lower is better)
Translates to: SPSLVTYNLCPWCNVILTPSLIL*LSRKEG
Trigger: TCCTTCTTTCCTAGACAATCAAAGTATCAGTGATGG...AGTGAGGATGACATTGCACCAGGGACAGAGATTGTATGTGACAAGGCTGGGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272252.10
CDS-3UTR TCA 90 bp AAGGAGCCCCAGCCTTGTCACATACAATCTCTGTCCCTGGTGCAATGTCATCCTACCAAAACCCATCACTaGTACTTTGATTGTCTAGGA +
Preference number: 4 (lower is better)
Translates to: KEPQPCHIQSLSLVQCHPTKTHH*YFDCLG
Trigger: TCCTAGACAATCAAAGTATCAGTGATGGGTTTTGGT...AGGATGACATTGCACCAGGGACAGAGATTGTATGTGACAAGGCTGGGGCTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272252.10
CDS-3UTR GCA 90 bp CAGAAATTGTGGTCAAAACCATTGAGATGGAAGTCCTGCAGGTGTTTTCCAAGCGGCCTGACTGGCTTGTaGTCTGTAGTTGACTATGAG +
Preference number: 4 (lower is better)
Translates to: QKLWSKPLRWKSCRCFPSGLTGL*SVVDYE
Trigger: CTCATAGTCAACTACAGAGCACAAGCCAGTCAGGCC...GCTTGGAAAACACCTGCAGGACTTCCATCTCAATGGTTTTGACCACAATTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444351.5
CDS-3UTR GCA 90 bp ACAGAAATTGTGGTCAAAACCATTGAGATGGAAGTCCTGCAGGTGTTTTCCAAGTGGGGAAGCCTGGCCTaGCAGGTTGAAGTAAGAATG +
Preference number: 4 (lower is better)
Translates to: TEIVVKTIEMEVLQVFSKWGSLA*QVEVRM
Trigger: CATTCTTACTTCAACCTGGCAGGCCAGGCTTCCCCA...CTTGGAAAACACCTGCAGGACTTCCATCTCAATGGTTTTGACCACAATTTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000444351.5
CDS-3UTR GCA 90 bp TGTAAGCCTCAGTTTCCTCACTTATCAATCATCTACTGCTGTATAGAGACAGGTGCGGGGCTGATTGACTaGATCAGGCCAGTTCTGAGT +
Preference number: 4 (lower is better)
Translates to: CKPQFPHLSIIYCCIETGAGLID*IRPVLS
Trigger: ACTCAGAACTGGCCTGATGCAGTCAATCAGCCCCGC...ACCTGTCTCTATACAGCAGTAGATGATTGATAAGTGAGGAAACTGAGGCTTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272252.10
CDS-3UTR CCA 90 bp GTCAAAACCATTGAGATGGAAGTCCTGCAGGTGTTTTCCAAGCTCCACTGGCTTAAGTATGGCTGCTTTTaGAGGTATCCTTCCAACTCG +
Preference number: 4 (lower is better)
Translates to: VKTIEMEVLQVFSKLHWLKYGCF*RYPSNS
Trigger: CGAGTTGGAAGGATACCTCCAAAAGCAGCCATACTT...AAGCCAGTGGAGCTTGGAAAACACCTGCAGGACTTCCATCTCAATGGTTTTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000444351.5
CDS-3UTR CCA 90 bp GAAGATTGGCCTGGTTTATTCTACTATAATAAGGAAGTAGCAGCACTCACATGTGGACCCCGGGCTGGGTaGTGTATACTTCTAGTACCC +
Preference number: 4 (lower is better)
Translates to: EDWPGLFYYNKEVAALTCGPRAG*CILLVP
Trigger: GGGTACTAGAAGTATACACCACCCAGCCCGGGGTCC...ACATGTGAGTGCTGCTACTTCCTTATTATAGTAGAATAAACCAGGCCAATCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434934.1
CDS-3UTR CCA 90 bp TTAGATGACGACATTGTTGGTTGGGTTCACTTGCCCTCTGAACTGCACAGGGAATACAATCTCTGTCCCTaGTGCAATGTCATCCTCACT +
Preference number: 4 (lower is better)
Translates to: LDDDIVGWVHLPSELHREYNLCP*CNVILT
Trigger: AGTGAGGATGACATTGCACCAGGGACAGAGATTGTA...TTCCCTGTGCAGTTCAGAGGGCAAGTGAACCCAACCAACAATGTCGTCATCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272252.10
CDS-3UTR GCA 90 bp GAAGATTGGCCTGGTTTATTCTACTATAATAAGGAAGTAGCAGCACTCACATGTCTTTCTCAGGTCGAATaGAGTGCCTTGCACTGGGGC +
Preference number: 4 (lower is better)
Translates to: EDWPGLFYYNKEVAALTCLSQVE*SALHWG
Trigger: GCCCCAGTGCAAGGCACTGCATTCGACCTGAGAAAG...ACATGTGAGTGCTGCTACTTCCTTATTATAGTAGAATAAACCAGGCCAATCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434934.1
CDS-3UTR GCA 90 bp TTGTTGGTTGGGTTCACTTGCCCTCTGAACTGCACAGGGAATCGAGCTGGTCATAGCATGATGCACCCTTaGACAAAAATGCTTTTCTTT +
Preference number: 4 (lower is better)
Translates to: LLVGFTCPLNCTGNRAGHSMMHP*TKMLFF
Trigger: AAAGAAAAGCATTTTTGTGCAAGGGTGCATCATGCT...ATGACCAGCTCGATTCCCTGTGCAGTTCAGAGGGCAAGTGAACCCAACCAACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272252.10
ENST00000410063.5
CDS-3UTR CCA 90 bp GAAGATTGGCCTGGTTTATTCTACTATAATAAGGAAGTAGCAGCACTCACATGTCTGATGCGCGAGAACTaGACGCCATTTGACAGCACC +
Preference number: 4 (lower is better)
Translates to: EDWPGLFYYNKEVAALTCLMREN*TPFDST
Trigger: GGTGCTGTCAAATGGCGTCCAGTTCTCGCGCATCAG...ACATGTGAGTGCTGCTACTTCCTTATTATAGTAGAATAAACCAGGCCAATCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434934.1
CDS-3UTR CCA 90 bp TTGGAAGATTGGCCTGGTTTATTCTACTATAATAAGGAAGTAGCAGCACTCACATGCAGTGCCTTGCACTaGGGCAACTTCTCCTGTAGG +
Preference number: 4 (lower is better)
Translates to: LEDWPGLFYYNKEVAALTCSALH*GNFSCR
Trigger: CCTACAGGAGAAGTTGCCCCAGTGCAAGGCACTGCA...TGTGAGTGCTGCTACTTCCTTATTATAGTAGAATAAACCAGGCCAATCTTCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434934.1
CDS-3UTR TCA 90 bp TTATTGGAAGATTGGCCTGGTTTATTCTACTATAATAAGGAAGTAGCAGCACTCAATGGTTGGTCAGGTTaGCTGGTGTGGCCTGACTGG +
Preference number: 4 (lower is better)
Translates to: LLEDWPGLFYYNKEVAALNGWSG*LVWPDW
Trigger: CCAGTCAGGCCACACCAGTCAACCTGACCAACCATT...GAGTGCTGCTACTTCCTTATTATAGTAGAATAAACCAGGCCAATCTTCCAATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434934.1
CDS-3UTR TCA 90 bp GATTGGCCTGGTTTATTCTACTATAATAAGGAAGTAGCAGCACTCACATGTGAACCTGGCCTGCCAGGTTaGAGTAAGAATGGTTGGTCA +
Preference number: 4 (lower is better)
Translates to: DWPGLFYYNKEVAALTCEPGLPG*SKNGWS
Trigger: TGACCAACCATTCTTACTTCAACCTGGCAGGCCAGG...TTCACATGTGAGTGCTGCTACTTCCTTATTATAGTAGAATAAACCAGGCCAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434934.1
CDS-3UTR TCA 90 bp AAAGAAGGAGCCCCAGCCTTGTCACATACAATCTCTGTCCCTGGTGCAATGTCATATCCGCTTCTATGGTaGCTTCATGGTCATTTATAT +
Preference number: 4 (lower is better)
Translates to: KEGAPALSHTISVPGAMSYPLLW*LHGHLY
Trigger: ATATAAATGACCATGAAGTCACCATAGAAGCGGATA...TGACATTGCACCAGGGACAGAGATTGTATGTGACAAGGCTGGGGCTCCTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272252.10
CDS-3UTR TCA 90 bp TTATTGGAAGATTGGCCTGGTTTATTCTACTATAATAAGGAAGTAGCAGCACTCCGCCCGCTTGCAGCATaGTGCACCCTTGCACAAAAA +
Preference number: 4 (lower is better)
Translates to: LLEDWPGLFYYNKEVAALRPLAA*CTLAQK
Trigger: TTTTTGTGCAAGGGTGCATCATGCTGCAAGCGGGCG...GAGTGCTGCTACTTCCTTATTATAGTAGAATAAACCAGGCCAATCTTCCAATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434934.1
CDS-3UTR GCA 90 bp TTGGAAGATTGGCCTGGTTTATTCTACTATAATAAGGAAGTAGCAGCACTCACATCGAATGCAGTGCCTTaGACTGGGGCAACTTCTCCT +
Preference number: 4 (lower is better)
Translates to: LEDWPGLFYYNKEVAALTSNAVP*TGATSP
Trigger: AGGAGAAGTTGCCCCAGTGCAAGGCACTGCATTCGA...TGTGAGTGCTGCTACTTCCTTATTATAGTAGAATAAACCAGGCCAATCTTCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434934.1
CDS-3UTR GCA 90 bp TTGGAAGATTGGCCTGGTTTATTCTACTATAATAAGGAAGTAGCAGCACTCACATCAGGTCGAATGCAGTaGCTTGCACTGGGGCAACTT +
Preference number: 4 (lower is better)
Translates to: LEDWPGLFYYNKEVAALTSGRMQ*LALGQL
Trigger: AAGTTGCCCCAGTGCAAGGCACTGCATTCGACCTGA...TGTGAGTGCTGCTACTTCCTTATTATAGTAGAATAAACCAGGCCAATCTTCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434934.1
CDS-3UTR GCA 90 bp ACAGAAATTGTGGTCAAAACCATTGAGATGGAAGTCCTGCAGGTGTTTTCCAAGTTGAGATGGAAGTCCTaGAGGTGTTTTCCAAGCTCC +
Preference number: 4 (lower is better)
Translates to: TEIVVKTIEMEVLQVFSKLRWKS*RCFPSS
Trigger: GGAGCTTGGAAAACACCTGCAGGACTTCCATCTCAA...CTTGGAAAACACCTGCAGGACTTCCATCTCAATGGTTTTGACCACAATTTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000444351.5
CDS-3UTR CCA 90 bp GATTGGCCTGGTTTATTCTACTATAATAAGGAAGTAGCAGCACTCACATGTGAAGCCTTCTTCACCATCTaGACTGATGCGCGAGAACTG +
Preference number: 4 (lower is better)
Translates to: DWPGLFYYNKEVAALTCEAFFTI*TDAREL
Trigger: CAGTTCTCGCGCATCAGTCCAGATGGTGAAGAAGGC...TTCACATGTGAGTGCTGCTACTTCCTTATTATAGTAGAATAAACCAGGCCAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434934.1
CDS-3UTR CCA 90 bp GAAGATTGGCCTGGTTTATTCTACTATAATAAGGAAGTAGCAGCACTCACATGTAACTGGACCCCGGGCTaGGTGGTGTATACTTCTAGT +
Preference number: 4 (lower is better)
Translates to: EDWPGLFYYNKEVAALTCNWTPG*VVYTSS
Trigger: ACTAGAAGTATACACCACCCAGCCCGGGGTCCAGTT...ACATGTGAGTGCTGCTACTTCCTTATTATAGTAGAATAAACCAGGCCAATCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434934.1
CDS-3UTR CCA 90 bp ACATTGTTGGTTGGGTTCACTTGCCCTCTGAACTGCACAGGGAATCGAGCTGGTTATTTATTAGCTTGTTaGTCTTCAACCTCTGTAAGC +
Preference number: 4 (lower is better)
Translates to: TLLVGFTCPLNCTGNRAGYLLAC*SSTSVS
Trigger: GCTTACAGAGGTTGAAGACCAACAAGCTAATAAATA...ACCAGCTCGATTCCCTGTGCAGTTCAGAGGGCAAGTGAACCCAACCAACAATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272252.10
CDS-3UTR GCA 90 bp TTGGAAGATTGGCCTGGTTTATTCTACTATAATAAGGAAGTAGCAGCACTCACAGGCCTGACTGGCTTGTaGTCTGTAGTTGACTATGAG +
Preference number: 4 (lower is better)
Translates to: LEDWPGLFYYNKEVAALTGLTGL*SVVDYE
Trigger: CTCATAGTCAACTACAGAGCACAAGCCAGTCAGGCC...TGTGAGTGCTGCTACTTCCTTATTATAGTAGAATAAACCAGGCCAATCTTCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434934.1
CDS-3UTR GCA 90 bp TTATTGGAAGATTGGCCTGGTTTATTCTACTATAATAAGGAAGTAGCAGCACTCTGGGGAAGCCTGGCCTaGCAGGTTGAAGTAAGAATG +
Preference number: 4 (lower is better)
Translates to: LLEDWPGLFYYNKEVAALWGSLA*QVEVRM
Trigger: CATTCTTACTTCAACCTGGCAGGCCAGGCTTCCCCA...GAGTGCTGCTACTTCCTTATTATAGTAGAATAAACCAGGCCAATCTTCCAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434934.1
CDS-3UTR GCA 90 bp TTATTGGAAGATTGGCCTGGTTTATTCTACTATAATAAGGAAGTAGCAGCACTCTGCCATCCAGGAAGTTaGCCGTGTAAAACTGGACCC +
Preference number: 4 (lower is better)
Translates to: LLEDWPGLFYYNKEVAALCHPGS*PCKTGP
Trigger: GGGTCCAGTTTTACACGGGCAACTTCCTGGATGGCA...GAGTGCTGCTACTTCCTTATTATAGTAGAATAAACCAGGCCAATCTTCCAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434934.1
CDS-3UTR GCA 90 bp ATGCTTTTCTTTAGATCCCTTCAGACAGAAATTGTGGTCAAAACCATTGAGATGTGGGGCAACTTCTCCTaGAAACTTTGCTCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: MLFFRSLQTEIVVKTIEMWGNFS*KLCSWS
Trigger: GGACCAGGAGCAAAGTTTGCAGGAGAAGTTGCCCCA...CATCTCAATGGTTTTGACCACAATTTCTGTCTGAAGGGATCTAAAGAAAAGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000444351.5
CDS-3UTR CCA 90 bp ACATGGCCTGGAGCCAGTCACTGGAAAAGGAAATCAATACCCAGACTGATTCTCTTCAGACAGAAATTGTaGTCAAAACCATTGAGATGG +
Preference number: 4 (lower is better)
Translates to: TWPGASHWKRKSIPRLILFRQKL*SKPLRW
Trigger: CCATCTCAATGGTTTTGACCACAATTTCTGTCTGAA...GAGAATCAGTCTGGGTATTGATTTCCTTTTCCAGTGACTGGCTCCAGGCCATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272252.10
ENST00000410063.5
CDS-3UTR TCA 90 bp GATTGGCCTGGTTTATTCTACTATAATAAGGAAGTAGCAGCACTCACATGTGAATGTGGTCAAAACCATTaGGATGGAAGTCCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: DWPGLFYYNKEVAALTCECGQNH*DGSPAG
Trigger: ACCTGCAGGACTTCCATCTCAATGGTTTTGACCACA...TTCACATGTGAGTGCTGCTACTTCCTTATTATAGTAGAATAAACCAGGCCAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434934.1
CDS-3UTR TCA 90 bp GATTGGCCTGGTTTATTCTACTATAATAAGGAAGTAGCAGCACTCACATGTGAAGGAAAGGAAACTGATTaGCTGCATCAGGCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: DWPGLFYYNKEVAALTCEGKETD*LHQASS
Trigger: AGAACTGGCCTGATGCAGTCAATCAGTTTCCTTTCC...TTCACATGTGAGTGCTGCTACTTCCTTATTATAGTAGAATAAACCAGGCCAATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434934.1
CDS-3UTR TCA 90 bp TTATTGGAAGATTGGCCTGGTTTATTCTACTATAATAAGGAAGTAGCAGCACTCTGCTGGAAAGGAAACTaGTTGACTGCATCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: LLEDWPGLFYYNKEVAALCWKGN*LTASGQ
Trigger: CTGGCCTGATGCAGTCAATCAGTTTCCTTTCCAGCA...GAGTGCTGCTACTTCCTTATTATAGTAGAATAAACCAGGCCAATCTTCCAATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434934.1
CDS-3UTR GCA 90 bp TTGGAAGATTGGCCTGGTTTATTCTACTATAATAAGGAAGTAGCAGCACTCACATTGAGATGGAAGTCCTaGAGGTGTTTTCCAAGCTCC +
Preference number: 4 (lower is better)
Translates to: LEDWPGLFYYNKEVAALTLRWKS*RCFPSS
Trigger: GGAGCTTGGAAAACACCTGCAGGACTTCCATCTCAA...TGTGAGTGCTGCTACTTCCTTATTATAGTAGAATAAACCAGGCCAATCTTCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434934.1
CDS-3UTR GCA 90 bp TTATTGGAAGATTGGCCTGGTTTATTCTACTATAATAAGGAAGTAGCAGCACTCTCTTGCCCTTTAATGTaGCATCCAGGAAGTTGCCCG +
Preference number: 4 (lower is better)
Translates to: LLEDWPGLFYYNKEVAALSCPLM*HPGSCP
Trigger: CGGGCAACTTCCTGGATGGCACATTAAAGGGCAAGA...GAGTGCTGCTACTTCCTTATTATAGTAGAATAAACCAGGCCAATCTTCCAATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434934.1
CDS-3UTR CCA 90 bp GATTGGCCTGGTTTATTCTACTATAATAAGGAAGTAGCAGCACTCACATGTGAAATGGTCATTTATATTTaGGGAAGCCTGGCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: DWPGLFYYNKEVAALTCEMVIYI*GSLACQ
Trigger: CTGGCAGGCCAGGCTTCCCCAAATATAAATGACCAT...TTCACATGTGAGTGCTGCTACTTCCTTATTATAGTAGAATAAACCAGGCCAATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434934.1
CDS-3UTR CCA 90 bp GAAGATTGGCCTGGTTTATTCTACTATAATAAGGAAGTAGCAGCACTCACATGTAGAAACCGGAGTGCTTaGGATAGACAGCTCCATTCT +
Preference number: 4 (lower is better)
Translates to: EDWPGLFYYNKEVAALTCRNRSA*DRQLHS
Trigger: AGAATGGAGCTGTCTATCCCAAGCACTCCGGTTTCT...ACATGTGAGTGCTGCTACTTCCTTATTATAGTAGAATAAACCAGGCCAATCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434934.1
CDS-3UTR TCA 90 bp GAAGATTGGCCTGGTTTATTCTACTATAATAAGGAAGTAGCAGCACTCACATGTTTCTCTGTCTCCAAATaGTCCCATGCTGGAAAGGAA +
Preference number: 4 (lower is better)
Translates to: EDWPGLFYYNKEVAALTCFSVSK*SHAGKE
Trigger: TTCCTTTCCAGCATGGGATCATTTGGAGACAGAGAA...ACATGTGAGTGCTGCTACTTCCTTATTATAGTAGAATAAACCAGGCCAATCTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434934.1
CDS-3UTR GCA 90 bp GAAGATTGGCCTGGTTTATTCTACTATAATAAGGAAGTAGCAGCACTCACATGTAGGAAACTGATTGACTaGATCAGGCCAGTTCTGAGT +
Preference number: 4 (lower is better)
Translates to: EDWPGLFYYNKEVAALTCRKLID*IRPVLS
Trigger: ACTCAGAACTGGCCTGATGCAGTCAATCAGTTTCCT...ACATGTGAGTGCTGCTACTTCCTTATTATAGTAGAATAAACCAGGCCAATCTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434934.1
CDS-3UTR TCA 90 bp ACAGAAATTGTGGTCAAAACCATTGAGATGGAAGTCCTGCAGGTGTTTTCCAAGTATCCGCTTCTATGGTaGCTTCATGGTCATTTATAT +
Preference number: 4 (lower is better)
Translates to: TEIVVKTIEMEVLQVFSKYPLLW*LHGHLY
Trigger: ATATAAATGACCATGAAGTCACCATAGAAGCGGATA...CTTGGAAAACACCTGCAGGACTTCCATCTCAATGGTTTTGACCACAATTTCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444351.5
CDS-3UTR TCA 90 bp GATTGGCCTGGTTTATTCTACTATAATAAGGAAGTAGCAGCACTCACATGTGAAAGCAGCACTCACATGTaGATCAAAGGATTCTGCTAT +
Preference number: 4 (lower is better)
Translates to: DWPGLFYYNKEVAALTCESSTHM*IKGFCY
Trigger: ATAGCAGAATCCTTTGATTCACATGTGAGTGCTGCT...TTCACATGTGAGTGCTGCTACTTCCTTATTATAGTAGAATAAACCAGGCCAATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434934.1
CDS-3UTR GCA 90 bp TTATTGGAAGATTGGCCTGGTTTATTCTACTATAATAAGGAAGTAGCAGCACTCAGACAGCTCCATTCTTaGCCTTTAATGTGCCATCCA +
Preference number: 4 (lower is better)
Translates to: LLEDWPGLFYYNKEVAALRQLHS*PLMCHP
Trigger: TGGATGGCACATTAAAGGGCAAGAATGGAGCTGTCT...GAGTGCTGCTACTTCCTTATTATAGTAGAATAAACCAGGCCAATCTTCCAATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434934.1
CDS-3UTR CCA 90 bp TGTAAGCCTCAGTTTCCTCACTTATCAATCATCTACTGCTGTATAGAGACAGGTTCAAAACCATTGAGATaGAAGTCCTGCAGGTGTTTT +
Preference number: 4 (lower is better)
Translates to: CKPQFPHLSIIYCCIETGSKPLR*KSCRCF
Trigger: AAAACACCTGCAGGACTTCCATCTCAATGGTTTTGA...ACCTGTCTCTATACAGCAGTAGATGATTGATAAGTGAGGAAACTGAGGCTTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272252.10
CDS-3UTR CCA 90 bp GATTGGCCTGGTTTATTCTACTATAATAAGGAAGTAGCAGCACTCACATGTGAATCAAAACCATTGAGATaGAAGTCCTGCAGGTGTTTT +
Preference number: 4 (lower is better)
Translates to: DWPGLFYYNKEVAALTCESKPLR*KSCRCF
Trigger: AAAACACCTGCAGGACTTCCATCTCAATGGTTTTGA...TTCACATGTGAGTGCTGCTACTTCCTTATTATAGTAGAATAAACCAGGCCAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434934.1
CDS-3UTR TCA 90 bp GAAGATTGGCCTGGTTTATTCTACTATAATAAGGAAGTAGCAGCACTCACATGTTATCCGCTTCTATGGTaGCTTCATGGTCATTTATAT +
Preference number: 4 (lower is better)
Translates to: EDWPGLFYYNKEVAALTCYPLLW*LHGHLY
Trigger: ATATAAATGACCATGAAGTCACCATAGAAGCGGATA...ACATGTGAGTGCTGCTACTTCCTTATTATAGTAGAATAAACCAGGCCAATCTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434934.1
CDS-3UTR GCA 90 bp GAAGATTGGCCTGGTTTATTCTACTATAATAAGGAAGTAGCAGCACTCACATGTAGCATGATGCACCCTTaGACAAAAATGCTTTTCTTT +
Preference number: 4 (lower is better)
Translates to: EDWPGLFYYNKEVAALTCSMMHP*TKMLFF
Trigger: AAAGAAAAGCATTTTTGTGCAAGGGTGCATCATGCT...ACATGTGAGTGCTGCTACTTCCTTATTATAGTAGAATAAACCAGGCCAATCTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434934.1
CDS-3UTR GCA 90 bp ATGCTTTTCTTTAGATCCCTTCAGACAGAAATTGTGGTCAAAACCATTGAGATGAGCATGATGCACCCTTaGACAAAAATGCTTTTCTTT +
Preference number: 4 (lower is better)
Translates to: MLFFRSLQTEIVVKTIEMSMMHP*TKMLFF
Trigger: AAAGAAAAGCATTTTTGTGCAAGGGTGCATCATGCT...CATCTCAATGGTTTTGACCACAATTTCTGTCTGAAGGGATCTAAAGAAAAGCAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000444351.5
CDS-3UTR CCA 90 bp TTATTGGAAGATTGGCCTGGTTTATTCTACTATAATAAGGAAGTAGCAGCACTCTTCAGACAGAAATTGTaGTCAAAACCATTGAGATGG +
Preference number: 4 (lower is better)
Translates to: LLEDWPGLFYYNKEVAALFRQKL*SKPLRW
Trigger: CCATCTCAATGGTTTTGACCACAATTTCTGTCTGAA...GAGTGCTGCTACTTCCTTATTATAGTAGAATAAACCAGGCCAATCTTCCAATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434934.1
CDS GCA 90 bp CCTTCCAACTCGGCGAAGCCAAGCACCACGTCCGAGGCTCTCCCCTaGCTGTCTTTGACCTCTAGGGCTGTGATCGTGCAGCCCCAGGAG +
Preference number: 5 (lower is better)
Translates to: PSNSAKPSTTSEALP*LSLTSRAVIVQPQE
Trigger: CTCCTGGGGCTGCACGATCACAGCCCTAGAGGTCAAAGACAGGCAGGGGAGAGCCTCGGACGTGGTGCTTGGCTTCGCCGAGTTGGAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272252.10
ENST00000410063.5
ENST00000427858.4
ENST00000444351.5
CDS CCA 90 bp AGCTCTCCAAACACGGCCCTGGTCACCGAAGCCATAGGGAAAGTTTaGCGTGTGCAGCCACTGCCCGCTCTTCAAACTCCAGCGCTCGCT +
Preference number: 5 (lower is better)
Translates to: SSPNTALVTEAIGKV*RVQPLPALQTPALA
Trigger: AGCGAGCGCTGGAGTTTGAAGAGCGGGCAGTGGCTGCACACGCCAAACTTTCCCTATGGCTTCGGTGACCAGGGCCGTGTTTGGAGAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427858.4
CDS-3UTR CAA 90 bp AGGCAGTGTGGAGAGATGGAGCCAACAGCAGCATGGGAGTCCCTGGCTAGGGTCGTCGAATGCAGTGCCTaGCACTGGGGCAACTTCTCC +
Preference number: 5 (lower is better)
Translates to: RQCGEMEPTAAWESLARVVECSA*HWGNFS
Trigger: GGAGAAGTTGCCCCAGTGCAAGGCACTGCATTCGAC...GACCCTAGCCAGGGACTCCCATGCTGCTGTTGGCTCCATCTCTCCACACTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272252.10
ENST00000410063.5
CDS TCA 90 bp TGTGATCGTGCAGCCCCAGGAGATGATGTCCACTCTCAAGAGGTCTaGCTGCAGCTGGAACTTCTCCACTGTCCCTCCTCCCGAGGGCAG +
Preference number: 5 (lower is better)
Translates to: CDRAAPGDDVHSQEV*LQLELLHCPSSRGQ
Trigger: CTGCCCTCGGGAGGAGGGACAGTGGAGAAGTTCCAGCTGCAGTCAGACCTCTTGAGAGTGGACATCATCTCCTGGGGCTGCACGATCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272252.10
ENST00000410063.5
ENST00000427858.4
CDS CCA 90 bp TGCCATCCAGGAAGTTGCCCGTGTAAAACTGGACCCCGGGCTGGGTaGTGTATACTTCTAGTACCCGCCCGCTTGCAGCATGATGCACCC +
Preference number: 5 (lower is better)
Translates to: CHPGSCPCKTGPRAG*CILLVPARLQHDAP
Trigger: GGGTGCATCATGCTGCAAGCGGGCGGGTACTAGAAGTATACACCACCCAGCCCGGGGTCCAGTTTTACACGGGCAACTTCCTGGATGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272252.10
ENST00000410063.5
ENST00000434934.1
CDS-3UTR CAA 90 bp GAACTGCACAGGGAATCGAGCTGGTCATTAGACATGGCCTGGAGCCAGTCACTGAGAACTGGACGCCATTaGACAGCACCCGAGGGGTCC +
Preference number: 5 (lower is better)
Translates to: ELHRESSWSLDMAWSQSLRTGRH*TAPEGS
Trigger: GGACCCCTCGGGTGCTGTCAAATGGCGTCCAGTTCT...CAGTGACTGGCTCCAGGCCATGTCTAATGACCAGCTCGATTCCCTGTGCAGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272252.10
CDS-3UTR CAA 90 bp TCCACTGGCTTTCTCAGGTCGAATGCAGTGCCTTGCACTGGGGCAACTTCTCCTAGAACTGGACGCCATTaGACAGCACCCGAGGGGTCC +
Preference number: 5 (lower is better)
Translates to: STGFLRSNAVPCTGATSPRTGRH*TAPEGS
Trigger: GGACCCCTCGGGTGCTGTCAAATGGCGTCCAGTTCT...AGGAGAAGTTGCCCCAGTGCAAGGCACTGCATTCGACCTGAGAAAGCCAGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444351.5
CDS-3UTR CAA 90 bp GGGTGGTGTATACTTCTAGTACCCGCCCGCTTGCAGCATGATGCACCCTTGCACGTCGAATGCAGTGCCTaGCACTGGGGCAACTTCTCC +
Preference number: 5 (lower is better)
Translates to: GWCILLVPARLQHDAPLHVECSA*HWGNFS
Trigger: GGAGAAGTTGCCCCAGTGCAAGGCACTGCATTCGAC...GTGCAAGGGTGCATCATGCTGCAAGCGGGCGGGTACTAGAAGTATACACCACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444351.5
CDS TCA 90 bp GCCTTCTTCACCATCTGGACTGATGCGCGAGAACTGGACGCCATTTaGCAGCACCCGAGGGGTCCAGAGCACTTTATCAAACCCTCTGAC +
Preference number: 5 (lower is better)
Translates to: AFFTIWTDARELDAI*QHPRGPEHFIKPSD
Trigger: GTCAGAGGGTTTGATAAAGTGCTCTGGACCCCTCGGGTGCTGTCAAATGGCGTCCAGTTCTCGCGCATCAGTCCAGATGGTGAAGAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272252.10
ENST00000444351.5
CDS GCA 90 bp AACCGGAGTGCTTGGGATAGACAGCTCCATTCTTGCCCTTTAATGTaGCATCCAGGAAGTTGCCCGTGTAAAACTGGACCCCGGGCTGGG +
Preference number: 5 (lower is better)
Translates to: NRSAWDRQLHSCPLM*HPGSCPCKTGPRAG
Trigger: CCCAGCCCGGGGTCCAGTTTTACACGGGCAACTTCCTGGATGGCACATTAAAGGGCAAGAATGGAGCTGTCTATCCCAAGCACTCCGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272252.10
ENST00000410063.5
ENST00000434934.1
CDS-3UTR CAA 90 bp GCCCCAGCCTTGTCACATACAATCTCTGTCCCTGGTGCAATGTCATCCTCACTGAGCCATAGGGAAAGTTaGGCGTGTGCAGCCACTGCC +
Preference number: 5 (lower is better)
Translates to: APALSHTISVPGAMSSSLSHRES*ACAATA
Trigger: GGCAGTGGCTGCACACGCCAAACTTTCCCTATGGCT...CAGTGAGGATGACATTGCACCAGGGACAGAGATTGTATGTGACAAGGCTGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272252.10
CDS-3UTR CAA 90 bp ACAGGAGACAGGTGGCTGAGCCTAGCCCTGGACTGGATCATATCTTCACACTTCCTCCCCTGCCTGTCTTaGACCTCTAGGGCTGTGATC +
Preference number: 5 (lower is better)
Translates to: TGDRWLSLALDWIISSHFLPCLS*TSRAVI
Trigger: GATCACAGCCCTAGAGGTCAAAGACAGGCAGGGGAG...GAAGTGTGAAGATATGATCCAGTCCAGGGCTAGGCTCAGCCACCTGTCTCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272252.10
ENST00000410063.5
CDS-3UTR CAA 90 bp GACATTGTTGGTTGGGTTCACTTGCCCTCTGAACTGCACAGGGAATCGAGCTGGCCTTTGGCGATTCGGTaGGCCACCCTCCCAATAACT +
Preference number: 5 (lower is better)
Translates to: DIVGWVHLPSELHRESSWPLAIR*ATLPIT
Trigger: AGTTATTGGGAGGGTGGCCAACCGAATCGCCAAAGG...CCAGCTCGATTCCCTGTGCAGTTCAGAGGGCAAGTGAACCCAACCAACAATGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272252.10
CDS-3UTR CAA 90 bp ACATTGTTGGTTGGGTTCACTTGCCCTCTGAACTGCACAGGGAATCGAGCTGGTGTCGAATGCAGTGCCTaGCACTGGGGCAACTTCTCC +
Preference number: 5 (lower is better)
Translates to: TLLVGFTCPLNCTGNRAGVECSA*HWGNFS
Trigger: GGAGAAGTTGCCCCAGTGCAAGGCACTGCATTCGAC...ACCAGCTCGATTCCCTGTGCAGTTCAGAGGGCAAGTGAACCCAACCAACAATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272252.10
ENST00000410063.5
CDS-3UTR CAA 90 bp ACAGGAGACAGGTGGCTGAGCCTAGCCCTGGACTGGATCATATCTTCACACTTCGTTGGTTGGGTTCACTaGCCCTCTGAACTGCACAGG +
Preference number: 5 (lower is better)
Translates to: TGDRWLSLALDWIISSHFVGWVH*PSELHR
Trigger: CCTGTGCAGTTCAGAGGGCAAGTGAACCCAACCAAC...GAAGTGTGAAGATATGATCCAGTCCAGGGCTAGGCTCAGCCACCTGTCTCCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272252.10
ENST00000410063.5
CDS CCA 90 bp AGCCTGGCCTGCCAGGTTGAAGTAAGAATGGTTGGTCAGGTTGACTaGTGTGGCCTGACTGGCTTGTGCTCTGTAGTTGACTATGAGCTC +
Preference number: 5 (lower is better)
Translates to: SLACQVEVRMVGQVD*CGLTGLCSVVDYEL
Trigger: GAGCTCATAGTCAACTACAGAGCACAAGCCAGTCAGGCCACACCAGTCAACCTGACCAACCATTCTTACTTCAACCTGGCAGGCCAGGCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272252.10
ENST00000434934.1
ENST00000444351.5
CDS CCA 90 bp CTGCATCAGGCCAGTTCTGAGTCTCCAGGCAGAAACCGGAGTGCTTaGGATAGACAGCTCCATTCTTGCCCTTTAATGTGCCATCCAGGA +
Preference number: 5 (lower is better)
Translates to: LHQASSESPGRNRSA*DRQLHSCPLMCHPG
Trigger: TCCTGGATGGCACATTAAAGGGCAAGAATGGAGCTGTCTATCCCAAGCACTCCGGTTTCTGCCTGGAGACTCAGAACTGGCCTGATGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272252.10
ENST00000410063.5
ENST00000434934.1
CDS-3UTR CAA 90 bp GTGGAGAGATGGAGCCAACAGCAGCATGGGAGTCCCTGGCTAGGGTCAGGGCTTCAGCATGATGCACCCTaGCACAAAAATGCTTTTCTT +
Preference number: 5 (lower is better)
Translates to: VERWSQQQHGSPWLGSGLQHDAP*HKNAFL
Trigger: AAGAAAAGCATTTTTGTGCAAGGGTGCATCATGCTG...AAGCCCTGACCCTAGCCAGGGACTCCCATGCTGCTGTTGGCTCCATCTCTCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272252.10
ENST00000410063.5
CDS-3UTR CAA 90 bp AAGGAGCCCCAGCCTTGTCACATACAATCTCTGTCCCTGGTGCAATGTCATCCTGTTGGTTGGGTTCACTaGCCCTCTGAACTGCACAGG +
Preference number: 5 (lower is better)
Translates to: KEPQPCHIQSLSLVQCHPVGWVH*PSELHR
Trigger: CCTGTGCAGTTCAGAGGGCAAGTGAACCCAACCAAC...AGGATGACATTGCACCAGGGACAGAGATTGTATGTGACAAGGCTGGGGCTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272252.10
CDS-3UTR CAA 90 bp AAAGAAGGAGCCCCAGCCTTGTCACATACAATCTCTGTCCCTGGTGCAATGTCACTTTCTTCCCAAGCGTaGGCCGGGCTGTGCTTTCTC +
Preference number: 5 (lower is better)
Translates to: KEGAPALSHTISVPGAMSLSSQA*AGLCFL
Trigger: GAGAAAGCACAGCCCGGCCAACGCTTGGGAAGAAAG...TGACATTGCACCAGGGACAGAGATTGTATGTGACAAGGCTGGGGCTCCTTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272252.10
CDS TCA 90 bp CTGACTCCTCCATGCAGACTGTTGGGTTCCTTGTTAATGGCCAGGTaGTACTCCTTCCCATCCACCTTGAAGGTTCCTTTGGCGATTCGG +
Preference number: 5 (lower is better)
Translates to: LTPPCRLLGSLLMAR*YSFPSTLKVPLAIR
Trigger: CCGAATCGCCAAAGGAACCTTCAAGGTGGATGGGAAGGAGTATCACCTGGCCATTAACAAGGAACCCAACAGTCTGCATGGAGGAGTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272252.10
ENST00000427858.4
ENST00000444351.5
CDS GCA 90 bp CTTGAAGGTTCCTTTGGCGATTCGGTTGGCCACCCTCCCAATAACTaGTCCAAAGTATGGCTGCTTTTGGAGGTATCCTTCCAACTCGGC +
Preference number: 5 (lower is better)
Translates to: LEGSFGDSVGHPPNN*SKVWLLLEVSFQLG
Trigger: GCCGAGTTGGAAGGATACCTCCAAAAGCAGCCATACTTTGGAGCAGTTATTGGGAGGGTGGCCAACCGAATCGCCAAAGGAACCTTCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272252.10
ENST00000427858.4
ENST00000444351.5
CDS GCA 90 bp GTAAGAATGGTTGGTCAGGTTGACTGGTGTGGCCTGACTGGCTTGTaGTCTGTAGTTGACTATGAGCTCTCCGCCATCCAGGGTGTATGT +
Preference number: 5 (lower is better)
Translates to: VRMVGQVDWCGLTGL*SVVDYELSAIQGVC
Trigger: ACATACACCCTGGATGGCGGAGAGCTCATAGTCAACTACAGAGCACAAGCCAGTCAGGCCACACCAGTCAACCTGACCAACCATTCTTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272252.10
ENST00000434934.1
ENST00000444351.5
CDS-3UTR CAA 90 bp ACATGGCCTGGAGCCAGTCACTGGAAAAGGAAATCAATACCCAGACTGATTCTCAGCCATAGGGAAAGTTaGGCGTGTGCAGCCACTGCC +
Preference number: 5 (lower is better)
Translates to: TWPGASHWKRKSIPRLILSHRES*ACAATA
Trigger: GGCAGTGGCTGCACACGCCAAACTTTCCCTATGGCT...GAGAATCAGTCTGGGTATTGATTTCCTTTTCCAGTGACTGGCTCCAGGCCATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272252.10
ENST00000410063.5
CDS-3UTR CAA 90 bp TTAGATGACGACATTGTTGGTTGGGTTCACTTGCCCTCTGAACTGCACAGGGAACTCCCCTGCCTGTCTTaGACCTCTAGGGCTGTGATC +
Preference number: 5 (lower is better)
Translates to: LDDDIVGWVHLPSELHRELPCLS*TSRAVI
Trigger: GATCACAGCCCTAGAGGTCAAAGACAGGCAGGGGAG...TTCCCTGTGCAGTTCAGAGGGCAAGTGAACCCAACCAACAATGTCGTCATCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272252.10
ENST00000410063.5
CDS-3UTR CAA 90 bp GTGGTCAAAACCATTGAGATGGAAGTCCTGCAGGTGTTTTCCAAGCTCCACTGGCCTTTGGCGATTCGGTaGGCCACCCTCCCAATAACT +
Preference number: 5 (lower is better)
Translates to: VVKTIEMEVLQVFSKLHWPLAIR*ATLPIT
Trigger: AGTTATTGGGAGGGTGGCCAACCGAATCGCCAAAGG...CCAGTGGAGCTTGGAAAACACCTGCAGGACTTCCATCTCAATGGTTTTGACCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444351.5
CDS-3UTR CAA 90 bp GTGGTCAAAACCATTGAGATGGAAGTCCTGCAGGTGTTTTCCAAGCTCCACTGGACCTTGAAGGTTCCTTaGGCGATTCGGTTGGCCACC +
Preference number: 5 (lower is better)
Translates to: VVKTIEMEVLQVFSKLHWTLKVP*AIRLAT
Trigger: GGTGGCCAACCGAATCGCCAAAGGAACCTTCAAGGT...CCAGTGGAGCTTGGAAAACACCTGCAGGACTTCCATCTCAATGGTTTTGACCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444351.5
CDS-3UTR CAA 90 bp TGGTGTATACTTCTAGTACCCGCCCGCTTGCAGCATGATGCACCCTTGCACAAACCTCCATGCAGACTGTaGGGTTCCTTGTTAATGGCC +
Preference number: 5 (lower is better)
Translates to: WCILLVPARLQHDAPLHKPPCRL*GSLLMA
Trigger: GGCCATTAACAAGGAACCCAACAGTCTGCATGGAGG...TTTGTGCAAGGGTGCATCATGCTGCAAGCGGGCGGGTACTAGAAGTATACACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444351.5
CDS-3UTR CAA 90 bp CTTCCCAAGCGTTGGCCGGGCTGTGCTTTCTCAGTTAACCCAAAGGCTCTTGCATTGTGGTCAAAACCATaGAGATGGAAGTCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: LPKRWPGCAFSVNPKALALWSKP*RWKSCR
Trigger: CCTGCAGGACTTCCATCTCAATGGTTTTGACCACAA...TGCAAGAGCCTTTGGGTTAACTGAGAAAGCACAGCCCGGCCAACGCTTGGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272252.10
CDS GCA 90 bp GATAGACAGCTCCATTCTTGCCCTTTAATGTGCCATCCAGGAAGTTaGCCGTGTAAAACTGGACCCCGGGCTGGGTGGTGTATACTTCTA +
Preference number: 5 (lower is better)
Translates to: DRQLHSCPLMCHPGS*PCKTGPRAGWCILL
Trigger: TAGAAGTATACACCACCCAGCCCGGGGTCCAGTTTTACACGGGCAACTTCCTGGATGGCACATTAAAGGGCAAGAATGGAGCTGTCTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272252.10
ENST00000410063.5
ENST00000434934.1
CDS-3UTR CAA 90 bp TCCACTGGCTTTCTCAGGTCGAATGCAGTGCCTTGCACTGGGGCAACTTCTCCTAAAGTATGGCTGCTTTaGGAGGTATCCTTCCAACTC +
Preference number: 5 (lower is better)
Translates to: STGFLRSNAVPCTGATSPKVWLL*EVSFQL
Trigger: GAGTTGGAAGGATACCTCCAAAAGCAGCCATACTTT...AGGAGAAGTTGCCCCAGTGCAAGGCACTGCATTCGACCTGAGAAAGCCAGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444351.5
CDS-3UTR CAA 90 bp GACATTGTTGGTTGGGTTCACTTGCCCTCTGAACTGCACAGGGAATCGAGCTGGTTGTGGTCAAAACCATaGAGATGGAAGTCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: DIVGWVHLPSELHRESSWLWSKP*RWKSCR
Trigger: CCTGCAGGACTTCCATCTCAATGGTTTTGACCACAA...CCAGCTCGATTCCCTGTGCAGTTCAGAGGGCAAGTGAACCCAACCAACAATGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272252.10
ENST00000410063.5
CDS-3UTR CAA 90 bp GACATTGTTGGTTGGGTTCACTTGCCCTCTGAACTGCACAGGGAATCGAGCTGGAAAGTATGGCTGCTTTaGGAGGTATCCTTCCAACTC +
Preference number: 5 (lower is better)
Translates to: DIVGWVHLPSELHRESSWKVWLL*EVSFQL
Trigger: GAGTTGGAAGGATACCTCCAAAAGCAGCCATACTTT...CCAGCTCGATTCCCTGTGCAGTTCAGAGGGCAAGTGAACCCAACCAACAATGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272252.10
CDS-3UTR CAA 90 bp TTAGACATGGCCTGGAGCCAGTCACTGGAAAAGGAAATCAATACCCAGACTGATACCTTGAAGGTTCCTTaGGCGATTCGGTTGGCCACC +
Preference number: 5 (lower is better)
Translates to: LDMAWSQSLEKEINTQTDTLKVP*AIRLAT
Trigger: GGTGGCCAACCGAATCGCCAAAGGAACCTTCAAGGT...ATCAGTCTGGGTATTGATTTCCTTTTCCAGTGACTGGCTCCAGGCCATGTCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272252.10
CDS-3UTR CAA 90 bp TTAGACATGGCCTGGAGCCAGTCACTGGAAAAGGAAATCAATACCCAGACTGATCCTCCATGCAGACTGTaGGGTTCCTTGTTAATGGCC +
Preference number: 5 (lower is better)
Translates to: LDMAWSQSLEKEINTQTDPPCRL*GSLLMA
Trigger: GGCCATTAACAAGGAACCCAACAGTCTGCATGGAGG...ATCAGTCTGGGTATTGATTTCCTTTTCCAGTGACTGGCTCCAGGCCATGTCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272252.10
CDS-3UTR CAA 90 bp GGAGCCAGTCACTGGAAAAGGAAATCAATACCCAGACTGATTCTCAGAACAGCCTGTGGCCTGACTGGCTaGTGCTCTGTAGTTGACTAT +
Preference number: 5 (lower is better)
Translates to: GASHWKRKSIPRLILRTACGLTG*CSVVDY
Trigger: ATAGTCAACTACAGAGCACAAGCCAGTCAGGCCACA...GGCTGTTCTGAGAATCAGTCTGGGTATTGATTTCCTTTTCCAGTGACTGGCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272252.10
CDS-3UTR CAA 90 bp GTCAAAACCATTGAGATGGAAGTCCTGCAGGTGTTTTCCAAGCTCCACTGGCTTCATGGTCATTTATATTaGGGGAAGCCTGGCCTGCCA +
Preference number: 5 (lower is better)
Translates to: VKTIEMEVLQVFSKLHWLHGHLY*GKPGLP
Trigger: TGGCAGGCCAGGCTTCCCCAAATATAAATGACCATG...AAGCCAGTGGAGCTTGGAAAACACCTGCAGGACTTCCATCTCAATGGTTTTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000444351.5
CDS-3UTR CAA 90 bp GAAATTGTGGTCAAAACCATTGAGATGGAAGTCCTGCAGGTGTTTTCCAAGCTCTGTGGCCTGACTGGCTaGTGCTCTGTAGTTGACTAT +
Preference number: 5 (lower is better)
Translates to: EIVVKTIEMEVLQVFSKLCGLTG*CSVVDY
Trigger: ATAGTCAACTACAGAGCACAAGCCAGTCAGGCCACA...GAGCTTGGAAAACACCTGCAGGACTTCCATCTCAATGGTTTTGACCACAATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444351.5
CDS-3UTR CAA 90 bp GAAGATTGGCCTGGTTTATTCTACTATAATAAGGAAGTAGCAGCACTCACATGTGTCGAATGCAGTGCCTaGCACTGGGGCAACTTCTCC +
Preference number: 5 (lower is better)
Translates to: EDWPGLFYYNKEVAALTCVECSA*HWGNFS
Trigger: GGAGAAGTTGCCCCAGTGCAAGGCACTGCATTCGAC...ACATGTGAGTGCTGCTACTTCCTTATTATAGTAGAATAAACCAGGCCAATCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434934.1
CDS-3UTR CAA 90 bp ACCATTGAGATGGAAGTCCTGCAGGTGTTTTCCAAGCTCCACTGGCTTTCTCAGCAGCATGATGCACCCTaGCACAAAAATGCTTTTCTT +
Preference number: 5 (lower is better)
Translates to: TIEMEVLQVFSKLHWLSQQHDAP*HKNAFL
Trigger: AAGAAAAGCATTTTTGTGCAAGGGTGCATCATGCTG...CTGAGAAAGCCAGTGGAGCTTGGAAAACACCTGCAGGACTTCCATCTCAATGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000444351.5
CDS-3UTR CAA 90 bp ATGCTTTTCTTTAGATCCCTTCAGACAGAAATTGTGGTCAAAACCATTGAGATGCTCCCCTGCCTGTCTTaGACCTCTAGGGCTGTGATC +
Preference number: 5 (lower is better)
Translates to: MLFFRSLQTEIVVKTIEMLPCLS*TSRAVI
Trigger: GATCACAGCCCTAGAGGTCAAAGACAGGCAGGGGAG...CATCTCAATGGTTTTGACCACAATTTCTGTCTGAAGGGATCTAAAGAAAAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000444351.5
CDS-3UTR CAA 90 bp AAATTGTGGTCAAAACCATTGAGATGGAAGTCCTGCAGGTGTTTTCCAAGCTCCTTGTGGTCAAAACCATaGAGATGGAAGTCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: KLWSKPLRWKSCRCFPSSLWSKP*RWKSCR
Trigger: CCTGCAGGACTTCCATCTCAATGGTTTTGACCACAA...GGAGCTTGGAAAACACCTGCAGGACTTCCATCTCAATGGTTTTGACCACAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000444351.5
CDS-3UTR CAA 90 bp GGAGCCAGTCACTGGAAAAGGAAATCAATACCCAGACTGATTCTCAGAACAGCCCAGCATGATGCACCCTaGCACAAAAATGCTTTTCTT +
Preference number: 5 (lower is better)
Translates to: GASHWKRKSIPRLILRTAQHDAP*HKNAFL
Trigger: AAGAAAAGCATTTTTGTGCAAGGGTGCATCATGCTG...GGCTGTTCTGAGAATCAGTCTGGGTATTGATTTCCTTTTCCAGTGACTGGCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000272252.10
ENST00000410063.5
CDS-3UTR CAA 90 bp TGTAAGCCTCAGTTTCCTCACTTATCAATCATCTACTGCTGTATAGAGACAGGTCATGGTCATTTATATTaGGGGAAGCCTGGCCTGCCA +
Preference number: 5 (lower is better)
Translates to: CKPQFPHLSIIYCCIETGHGHLY*GKPGLP
Trigger: TGGCAGGCCAGGCTTCCCCAAATATAAATGACCATG...ACCTGTCTCTATACAGCAGTAGATGATTGATAAGTGAGGAAACTGAGGCTTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272252.10
CDS-3UTR CAA 90 bp TTGGAAGATTGGCCTGGTTTATTCTACTATAATAAGGAAGTAGCAGCACTCACATGTGGCCTGACTGGCTaGTGCTCTGTAGTTGACTAT +
Preference number: 5 (lower is better)
Translates to: LEDWPGLFYYNKEVAALTCGLTG*CSVVDY
Trigger: ATAGTCAACTACAGAGCACAAGCCAGTCAGGCCACA...TGTGAGTGCTGCTACTTCCTTATTATAGTAGAATAAACCAGGCCAATCTTCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434934.1
CDS-3UTR CAA 90 bp TTATTGGAAGATTGGCCTGGTTTATTCTACTATAATAAGGAAGTAGCAGCACTCCATGGTCATTTATATTaGGGGAAGCCTGGCCTGCCA +
Preference number: 5 (lower is better)
Translates to: LLEDWPGLFYYNKEVAALHGHLY*GKPGLP
Trigger: TGGCAGGCCAGGCTTCCCCAAATATAAATGACCATG...GAGTGCTGCTACTTCCTTATTATAGTAGAATAAACCAGGCCAATCTTCCAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434934.1
CDS-3UTR CAA 90 bp TTGGAAGATTGGCCTGGTTTATTCTACTATAATAAGGAAGTAGCAGCACTCACATTGTGGTCAAAACCATaGAGATGGAAGTCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: LEDWPGLFYYNKEVAALTLWSKP*RWKSCR
Trigger: CCTGCAGGACTTCCATCTCAATGGTTTTGACCACAA...TGTGAGTGCTGCTACTTCCTTATTATAGTAGAATAAACCAGGCCAATCTTCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434934.1
CDS-3UTR CAA 90 bp GAAGATTGGCCTGGTTTATTCTACTATAATAAGGAAGTAGCAGCACTCACATGTCAAAGGATTCTGCTATaGTCCTCTAGGTTTCTCTGT +
Preference number: 5 (lower is better)
Translates to: EDWPGLFYYNKEVAALTCQRILL*SSRFLC
Trigger: ACAGAGAAACCTAGAGGACAATAGCAGAATCCTTTG...ACATGTGAGTGCTGCTACTTCCTTATTATAGTAGAATAAACCAGGCCAATCTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434934.1
CDS-3UTR CAA 90 bp TTATTGGAAGATTGGCCTGGTTTATTCTACTATAATAAGGAAGTAGCAGCACTCCAGCATGATGCACCCTaGCACAAAAATGCTTTTCTT +
Preference number: 5 (lower is better)
Translates to: LLEDWPGLFYYNKEVAALQHDAP*HKNAFL
Trigger: AAGAAAAGCATTTTTGTGCAAGGGTGCATCATGCTG...GAGTGCTGCTACTTCCTTATTATAGTAGAATAAACCAGGCCAATCTTCCAATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434934.1
CDS CAA 72 bp CCAAGCACCACGTCCGAGGCTCTCCCCTGCCTGTCTTaGACCTCTAGGGCTGTGATCGTGCAGCCCCAGGAG +
Preference number: 6 (lower is better)
Translates to: PSTTSEALPCLS*TSRAVIVQPQE
Trigger: CTCCTGGGGCTGCACGATCACAGCCCTAGAGGTCAAAGACAGGCAGGGGAGAGCCTCGGACGTGGTGCTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272252.10
ENST00000410063.5
ENST00000427858.4
ENST00000444351.5
CDS CAA 90 bp TCGGCGAAGCCAAGCACCACGTCCGAGGCTCTCCCCTGCCTGTCTTaGACCTCTAGGGCTGTGATCGTGCAGCCCCAGGAGATGATGTCC +
Preference number: 6 (lower is better)
Translates to: SAKPSTTSEALPCLS*TSRAVIVQPQEMMS
Trigger: GGACATCATCTCCTGGGGCTGCACGATCACAGCCCTAGAGGTCAAAGACAGGCAGGGGAGAGCCTCGGACGTGGTGCTTGGCTTCGCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272252.10
ENST00000410063.5
ENST00000427858.4
ENST00000444351.5
CDS GCA 72 bp TCGGCGAAGCCAAGCACCACGTCCGAGGCTCTCCCCTaGCTGTCTTTGACCTCTAGGGCTGTGATCGTGCAG +
Preference number: 6 (lower is better)
Translates to: SAKPSTTSEALP*LSLTSRAVIVQ
Trigger: CTGCACGATCACAGCCCTAGAGGTCAAAGACAGGCAGGGGAGAGCCTCGGACGTGGTGCTTGGCTTCGCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272252.10
ENST00000410063.5
ENST00000427858.4
ENST00000444351.5
CDS CAA 90 bp CAGCTCTCCAAACACGGCCCTGGTCACCGAAGCCATAGGGAAAGTTaGGCGTGTGCAGCCACTGCCCGCTCTTCAAACTCCAGCGCTCGC +
Preference number: 6 (lower is better)
Translates to: QLSKHGPGHRSHRES*ACAATARSSNSSAR
Trigger: GCGAGCGCTGGAGTTTGAAGAGCGGGCAGTGGCTGCACACGCCAAACTTTCCCTATGGCTTCGGTGACCAGGGCCGTGTTTGGAGAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427858.4
CDS TCA 72 bp GCAGCCCCAGGAGATGATGTCCACTCTCAAGAGGTCTaGCTGCAGCTGGAACTTCTCCACTGTCCCTCCTCC +
Preference number: 6 (lower is better)
Translates to: AAPGDDVHSQEV*LQLELLHCPSS
Trigger: GGAGGAGGGACAGTGGAGAAGTTCCAGCTGCAGTCAGACCTCTTGAGAGTGGACATCATCTCCTGGGGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272252.10
ENST00000410063.5
ENST00000427858.4
CDS CCA 72 bp AACACGGCCCTGGTCACCGAAGCCATAGGGAAAGTTTaGCGTGTGCAGCCACTGCCCGCTCTTCAAACTCCA +
Preference number: 6 (lower is better)
Translates to: NTALVTEAIGKV*RVQPLPALQTP
Trigger: TGGAGTTTGAAGAGCGGGCAGTGGCTGCACACGCCAAACTTTCCCTATGGCTTCGGTGACCAGGGCCGTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272252.10
ENST00000427858.4
CDS CCA 72 bp GGAAGTTGCCCGTGTAAAACTGGACCCCGGGCTGGGTaGTGTATACTTCTAGTACCCGCCCGCTTGCAGCAT +
Preference number: 6 (lower is better)
Translates to: GSCPCKTGPRAG*CILLVPARLQH
Trigger: ATGCTGCAAGCGGGCGGGTACTAGAAGTATACACCACCCAGCCCGGGGTCCAGTTTTACACGGGCAACTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272252.10
ENST00000410063.5
ENST00000434934.1
CDS CAA 72 bp AAACACGGCCCTGGTCACCGAAGCCATAGGGAAAGTTaGGCGTGTGCAGCCACTGCCCGCTCTTCAAACTCC +
Preference number: 6 (lower is better)
Translates to: KHGPGHRSHRES*ACAATARSSNS
Trigger: GGAGTTTGAAGAGCGGGCAGTGGCTGCACACGCCAAACTTTCCCTATGGCTTCGGTGACCAGGGCCGTGTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272252.10
ENST00000410063.5
ENST00000427858.4
CDS CCA 72 bp CACTGGCTTTCTCAGGTCGAATGCAGTGCCTTGCACTaGGGCAACTTCTCCTTCCAACTCGGCGAAGCCAAG +
Preference number: 6 (lower is better)
Translates to: HWLSQVECSALH*GNFSFQLGEAK
Trigger: CTTGGCTTCGCCGAGTTGGAAGGAGAAGTTGCCCCAGTGCAAGGCACTGCATTCGACCTGAGAAAGCCAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410063.5
CDS TCA 72 bp TTAACTCTCCGGGGTAGCCTTCTTCACCATCTGGACTaGTGCGCGAGAACTGGACGCCATTTGACAGCACCC +
Preference number: 6 (lower is better)
Translates to: LTLRGSLLHHLD*CARTGRHLTAP
Trigger: GGGTGCTGTCAAATGGCGTCCAGTTCTCGCGCATCAGTCCAGATGGTGAAGAAGGCTACCCCGGAGAGTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272252.10
ENST00000434934.1
ENST00000444351.5
CDS GCA 72 bp GTTGGTCAGGTTGACTGGTGTGGCCTGACTGGCTTGTaGTCTGTAGTTGACTATGAGCTCTCCGCCATCCAG +
Preference number: 6 (lower is better)
Translates to: VGQVDWCGLTGL*SVVDYELSAIQ
Trigger: CTGGATGGCGGAGAGCTCATAGTCAACTACAGAGCACAAGCCAGTCAGGCCACACCAGTCAACCTGACCAAC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272252.10
ENST00000434934.1
ENST00000444351.5
CDS GCA 72 bp CTCCATTCTTGCCCTTTAATGTGCCATCCAGGAAGTTaGCCGTGTAAAACTGGACCCCGGGCTGGGTGGTGT +
Preference number: 6 (lower is better)
Translates to: LHSCPLMCHPGS*PCKTGPRAGWC
Trigger: ACACCACCCAGCCCGGGGTCCAGTTTTACACGGGCAACTTCCTGGATGGCACATTAAAGGGCAAGAATGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272252.10
ENST00000410063.5
ENST00000434934.1
CDS TCA 72 bp ACCATCTGGACTGATGCGCGAGAACTGGACGCCATTTaGCAGCACCCGAGGGGTCCAGAGCACTTTATCAAA +
Preference number: 6 (lower is better)
Translates to: TIWTDARELDAI*QHPRGPEHFIK
Trigger: TTTGATAAAGTGCTCTGGACCCCTCGGGTGCTGTCAAATGGCGTCCAGTTCTCGCGCATCAGTCCAGATGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272252.10
ENST00000444351.5
CDS CAA 72 bp ATGGTTGGTCAGGTTGACTGGTGTGGCCTGACTGGCTaGTGCTCTGTAGTTGACTATGAGCTCTCCGCCATC +
Preference number: 6 (lower is better)
Translates to: MVGQVDWCGLTG*CSVVDYELSAI
Trigger: GATGGCGGAGAGCTCATAGTCAACTACAGAGCACAAGCCAGTCAGGCCACACCAGTCAACCTGACCAACCAT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272252.10
ENST00000434934.1
ENST00000444351.5
CDS GCA 72 bp TTGGCCACCCTCCCAATAACTGCTCCAAAGTATGGCTaGTTTTGGAGGTATCCTTCCAACTCGGCGAAGCCA +
Preference number: 6 (lower is better)
Translates to: LATLPITAPKYG*FWRYPSNSAKP
Trigger: TGGCTTCGCCGAGTTGGAAGGATACCTCCAAAAGCAGCCATACTTTGGAGCAGTTATTGGGAGGGTGGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272252.10
ENST00000427858.4
ENST00000444351.5
CDS CCA 72 bp CACTGGCTTTCTCAGGTCGAATGCAGTGCCTTGCACTaGGGCAACTTCTCCTGTAGGAATCAGGGTTTCATC +
Preference number: 6 (lower is better)
Translates to: HWLSQVECSALH*GNFSCRNQGFI
Trigger: GATGAAACCCTGATTCCTACAGGAGAAGTTGCCCCAGTGCAAGGCACTGCATTCGACCTGAGAAAGCCAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272252.10
ENST00000434934.1
CDS CCA 72 bp GCCAGTTCTGAGTCTCCAGGCAGAAACCGGAGTGCTTaGGATAGACAGCTCCATTCTTGCCCTTTAATGTGC +
Preference number: 6 (lower is better)
Translates to: ASSESPGRNRSA*DRQLHSCPLMC
Trigger: GCACATTAAAGGGCAAGAATGGAGCTGTCTATCCCAAGCACTCCGGTTTCTGCCTGGAGACTCAGAACTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272252.10
ENST00000410063.5
ENST00000434934.1
CDS CAA 72 bp TTCCCATCCACCTTGAAGGTTCCTTTGGCGATTCGGTaGGCCACCCTCCCAATAACTGCTCCAAAGTATGGC +
Preference number: 6 (lower is better)
Translates to: FPSTLKVPLAIR*ATLPITAPKYG
Trigger: GCCATACTTTGGAGCAGTTATTGGGAGGGTGGCCAACCGAATCGCCAAAGGAACCTTCAAGGTGGATGGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272252.10
ENST00000427858.4
ENST00000444351.5
CDS CAA 90 bp GAAGTAAGAATGGTTGGTCAGGTTGACTGGTGTGGCCTGACTGGCTaGTGCTCTGTAGTTGACTATGAGCTCTCCGCCATCCAGGGTGTA +
Preference number: 6 (lower is better)
Translates to: EVRMVGQVDWCGLTG*CSVVDYELSAIQGV
Trigger: TACACCCTGGATGGCGGAGAGCTCATAGTCAACTACAGAGCACAAGCCAGTCAGGCCACACCAGTCAACCTGACCAACCATTCTTACTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272252.10
ENST00000434934.1
ENST00000444351.5
CDS GCA 72 bp TCCTTTGGCGATTCGGTTGGCCACCCTCCCAATAACTaGTCCAAAGTATGGCTGCTTTTGGAGGTATCCTTC +
Preference number: 6 (lower is better)
Translates to: SFGDSVGHPPNN*SKVWLLLEVSF
Trigger: GAAGGATACCTCCAAAAGCAGCCATACTTTGGAGCAGTTATTGGGAGGGTGGCCAACCGAATCGCCAAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272252.10
ENST00000427858.4
ENST00000444351.5
CDS GCA 72 bp GTTGAGGCTGCAGTGAGCCGAGATCGCACACACCATTaGACTCCAATTTTATCAAACCCTCTGACTCCTCCA +
Preference number: 6 (lower is better)
Translates to: VEAAVSRDRTHH*TPILSNPLTPP
Trigger: TGGAGGAGTCAGAGGGTTTGATAAAATTGGAGTGCAATGGTGTGTGCGATCTCGGCTCACTGCAGCCTCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427858.4
CDS CCA 72 bp TGCCAGGTTGAAGTAAGAATGGTTGGTCAGGTTGACTaGTGTGGCCTGACTGGCTTGTGCTCTGTAGTTGAC +
Preference number: 6 (lower is better)
Translates to: CQVEVRMVGQVD*CGLTGLCSVVD
Trigger: GTCAACTACAGAGCACAAGCCAGTCAGGCCACACCAGTCAACCTGACCAACCATTCTTACTTCAACCTGGCA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272252.10
ENST00000434934.1
ENST00000444351.5
CDS TCA 72 bp CCATGCAGACTGTTGGGTTCCTTGTTAATGGCCAGGTaGTACTCCTTCCCATCCACCTTGAAGGTTCCTTTG +
Preference number: 6 (lower is better)
Translates to: PCRLLGSLLMAR*YSFPSTLKVPL
Trigger: CAAAGGAACCTTCAAGGTGGATGGGAAGGAGTATCACCTGGCCATTAACAAGGAACCCAACAGTCTGCATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272252.10
ENST00000427858.4
ENST00000444351.5