RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GALK2 (Homo sapiens)

Ensembl gene IDs: ENSG00000156958

Ensembl transcript IDs: ENST00000327171.7, ENST00000396509.6, ENST00000544523.5, ENST00000558145.5, ENST00000558399.5, ENST00000558775.5, ENST00000558956.5, ENST00000559040.1, ENST00000559095.1, ENST00000559208.5, ENST00000559423.5, ENST00000559454.5, ENST00000559580.5, ENST00000559883.5, ENST00000559963.5, ENST00000560031.6, ENST00000560119.5, ENST00000560138.5, ENST00000560528.1, ENST00000560654.5, ENST00000561014.1, ENST00000561074.5

Found 806 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCGGGGCAGCTGCACTCATACATGTCCCGGCAGCTCATGTGGCTCTaGTTCATCAACTCTCCCAGCAGCTGGACCATGTTTTCAGGTGCT +
Preference number: 1 (lower is better)
Translates to: SGQLHSYMSRQLMWL*FINSPSSWTMFSGA
Trigger: AGCACCTGAAAACATGGTCCAGCTGCTGGGAGAGTTGATGAACCAGAGCCACATGAGCTGCCGGGACATGTATGAGTGCAGCTGCCCCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560119.5
3UTR CCA 90 bp TCCAGCTCGGGGCAGCTGCACTCATACATGTCCCGGCAGCTCATGTaGCTCTGGTTCATCAACTCTCCCAGCAGCTGGACCATGTTTTCA +
Preference number: 1 (lower is better)
Translates to: SSSGQLHSYMSRQLM*LWFINSPSSWTMFS
Trigger: TGAAAACATGGTCCAGCTGCTGGGAGAGTTGATGAACCAGAGCCACATGAGCTGCCGGGACATGTATGAGTGCAGCTGCCCCGAGCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560119.5
3UTR GCA 90 bp CCTAGTTTAGCCTGCACCTCCTCCAGCCTCAGTACTTTGTCCCATTaGAAGCTTTTGTATTTAGCCAGGAGCTTCGCAGCCAGCCGACAC +
Preference number: 1 (lower is better)
Translates to: PSLACTSSSLSTLSH*KLLYLARSFAASRH
Trigger: GTGTCGGCTGGCTGCGAAGCTCCTGGCTAAATACAAAAGCTTGCAATGGGACAAAGTACTGAGGCTGGAGGAGGTGCAGGCTAAACTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560119.5
3UTR TCA 90 bp AGATTTCTGCAAGTTCCACCTTGGATAGATTCCTTCCCAGCACTGTaGGCGTCACCAAGCCAGCACAACAGACCAAAGCACTGGAGCTGG +
Preference number: 1 (lower is better)
Translates to: RFLQVPPWIDSFPAL*ASPSQHNRPKHWSW
Trigger: CCAGCTCCAGTGCTTTGGTCTGTTGTGCTGGCTTGGTGACGCTCACAGTGCTGGGAAGGAATCTATCCAAGGTGGAACTTGCAGAAATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000559208.5
ENST00000559423.5
ENST00000559883.5
ENST00000560119.5
3UTR CCA 90 bp GCCAGCACAACAGACCAAAGCACTGGAGCTGGAGAGGCCAGAACTTaGTGGGATATTTCCATCTACCAGGCAGTTCATTCCAGTCAGGTT +
Preference number: 1 (lower is better)
Translates to: ASTTDQSTGAGEART*WDISIYQAVHSSQV
Trigger: AACCTGACTGGAATGAACTGCCTGGTAGATGGAAATATCCCACCAAGTTCTGGCCTCTCCAGCTCCAGTGCTTTGGTCTGTTGTGCTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558775.5
ENST00000559208.5
ENST00000559423.5
ENST00000559883.5
ENST00000559963.5
ENST00000560119.5
3UTR TCA 90 bp ATCTGCAGACCAGATGTGGCCCATGGGCTGCTGGGCTATAACCCCTaGTCTAAATGCTGCCTGGATTTGACTCTTCAAAAGCTAGCTCCA +
Preference number: 1 (lower is better)
Translates to: ICRPDVAHGLLGYNP*SKCCLDLTLQKLAP
Trigger: TGGAGCTAGCTTTTGAAGAGTCAAATCCAGGCAGCATTTAGATCAGGGGTTATAGCCCAGCAGCCCATGGGCCACATCTGGTCTGCAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
3UTR CCA 90 bp CATCACTCCTCTGGTAATAAGCTTTGTGCACATTTGCTAGAAAGCTaGGCAGCTTGTCCGCAGGTACCATTGATACTGTGCAGCCTCCCC +
Preference number: 1 (lower is better)
Translates to: HHSSGNKLCAHLLES*AACPQVPLILCSLP
Trigger: GGGGAGGCTGCACAGTATCAATGGTACCTGCGGACAAGCTGCCCAGCTTTCTAGCAAATGTGCACAAAGCTTATTACCAGAGGAGTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560119.5
3UTR CCA 90 bp TTAGTCATTCTGTGGGCCAAACTATATACATCTGCAGACCAGATGTaGCCCATGGGCTGCTGGGCTATAACCCCTGATCTAAATGCTGCC +
Preference number: 1 (lower is better)
Translates to: LVILWAKLYTSADQM*PMGCWAITPDLNAA
Trigger: GGCAGCATTTAGATCAGGGGTTATAGCCCAGCAGCCCATGGGCCACATCTGGTCTGCAGATGTATATAGTTTGGCCCACAGAATGACTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
3UTR CCA 90 bp ACTGGTCCATGCCTCCTCCTTCAGTGCCAATGTAACGCTCACTCTTaGCACAGATTTCTGCAAGTTCCACCTTGGATAGATTCCTTCCCA +
Preference number: 1 (lower is better)
Translates to: TGPCLLLQCQCNAHS*HRFLQVPPWIDSFP
Trigger: TGGGAAGGAATCTATCCAAGGTGGAACTTGCAGAAATCTGTGCCAAGAGTGAGCGTTACATTGGCACTGAAGGAGGAGGCATGGACCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000559208.5
ENST00000559423.5
ENST00000559883.5
ENST00000560119.5
3UTR CCA 90 bp AGGAGCTTCGCAGCCAGCCGACACTCCATCACCCTGATATTGAAATaGGAAGTTGCTGCCTTATTCATCTCCACACAACTGTTGGCAATC +
Preference number: 1 (lower is better)
Translates to: RSFAASRHSITLILK*EVAALFISTQLLAI
Trigger: GATTGCCAACAGTTGTGTGGAGATGAATAAGGCAGCAACTTCCCATTTCAATATCAGGGTGATGGAGTGTCGGCTGGCTGCGAAGCTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560119.5
3UTR CCA 90 bp TCCCGGCAGCTCATGTGGCTCTGGTTCATCAACTCTCCCAGCAGCTaGACCATGTTTTCAGGTGCTTCTTCACATATCTTCTTAAACTGG +
Preference number: 1 (lower is better)
Translates to: SRQLMWLWFINSPSS*TMFSGASSHIFLNW
Trigger: CCAGTTTAAGAAGATATGTGAAGAAGCACCTGAAAACATGGTCCAGCTGCTGGGAGAGTTGATGAACCAGAGCCACATGAGCTGCCGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560119.5
3UTR GCA 90 bp CGCAGCCAGCCGACACTCCATCACCCTGATATTGAAATGGGAAGTTaGTGCCTTATTCATCTCCACACAACTGTTGGCAATCACAAACAC +
Preference number: 1 (lower is better)
Translates to: RSQPTLHHPDIEMGS*CLIHLHTTVGNHKH
Trigger: GTGTTTGTGATTGCCAACAGTTGTGTGGAGATGAATAAGGCAGCAACTTCCCATTTCAATATCAGGGTGATGGAGTGTCGGCTGGCTGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559423.5
ENST00000560119.5
3UTR GCA 90 bp AGCCAGCCGACACTCCATCACCCTGATATTGAAATGGGAAGTTGCTaGCTTATTCATCTCCACACAACTGTTGGCAATCACAAACACTGC +
Preference number: 1 (lower is better)
Translates to: SQPTLHHPDIEMGSC*LIHLHTTVGNHKHC
Trigger: GCAGTGTTTGTGATTGCCAACAGTTGTGTGGAGATGAATAAGGCAGCAACTTCCCATTTCAATATCAGGGTGATGGAGTGTCGGCTGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559423.5
ENST00000560119.5
3UTR GCA 90 bp CACACCATGTTTGCCTATACCCATAGGCTTTGCTCATCTGCAGTGTaGACTCCACAGCTTTTAAACTCTACTCATCTTTTAGGGCCATGC +
Preference number: 1 (lower is better)
Translates to: HTMFAYTHRLCSSAV*TPQLLNSTHLLGPC
Trigger: GCATGGCCCTAAAAGATGAGTAGAGTTTAAAAGCTGTGGAGTGCACACTGCAGATGAGCAAAGCCTATGGGTATAGGCAAACATGGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
3UTR GCA 90 bp TGCTGCCTTATTCATCTCCACACAACTGTTGGCAATCACAAACACTaGTCCACTTGGGAGTTTTACATCGGTTGCCCTCAGAGGACTAAA +
Preference number: 1 (lower is better)
Translates to: CCLIHLHTTVGNHKH*STWEFYIGCPQRTK
Trigger: TTTAGTCCTCTGAGGGCAACCGATGTAAAACTCCCAAGTGGAGCAGTGTTTGTGATTGCCAACAGTTGTGTGGAGATGAATAAGGCAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559423.5
ENST00000560119.5
3UTR GCA 90 bp TCTGTGACCAACAGCATTTCTTCTAGACTAATCCCTAGTTTAGCCTaGACCTCCTCCAGCCTCAGTACTTTGTCCCATTGCAAGCTTTTG +
Preference number: 1 (lower is better)
Translates to: SVTNSISSRLIPSLA*TSSSLSTLSHCKLL
Trigger: CAAAAGCTTGCAATGGGACAAAGTACTGAGGCTGGAGGAGGTGCAGGCTAAACTAGGGATTAGTCTAGAAGAAATGCTGTTGGTCACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560119.5
3UTR CCA 90 bp CTTGTACAATCTCCTGATTTGGAGCCCAAGTTTTTAGTCATTCTGTaGGCCAAACTATATACATCTGCAGACCAGATGTGGCCCATGGGC +
Preference number: 1 (lower is better)
Translates to: LVQSPDLEPKFLVIL*AKLYTSADQMWPMG
Trigger: GCCCATGGGCCACATCTGGTCTGCAGATGTATATAGTTTGGCCCACAGAATGACTAAAAACTTGGGCTCCAAATCAGGAGATTGTACAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
3UTR GCA 90 bp GTTGGCAATCACAAACACTGCTCCACTTGGGAGTTTTACATCGGTTaGCCTCAGAGGACTAAATTCTATCAACTTGGCAGTTCCTTCTTC +
Preference number: 1 (lower is better)
Translates to: VGNHKHCSTWEFYIG*PQRTKFYQLGSSFF
Trigger: GAAGAAGGAACTGCCAAGTTGATAGAATTTAGTCCTCTGAGGGCAACCGATGTAAAACTCCCAAGTGGAGCAGTGTTTGTGATTGCCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559423.5
ENST00000560119.5
3UTR CCA 90 bp GCACTAGTACTGAAGTCCGGATACAAGGGATTTGTATTGGCCAGTTaGAGAGCGTACGTTTTCACAGGTTCTACAGCTATTAGCACATCT +
Preference number: 1 (lower is better)
Translates to: ALVLKSGYKGFVLAS*RAYVFTGSTAISTS
Trigger: AGATGTGCTAATAGCTGTAGAACCTGTGAAAACGTACGCTCTCCAACTGGCCAATACAAATCCCTTGTATCCGGACTTCAGTACTAGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558775.5
ENST00000559883.5
ENST00000559963.5
3UTR TCA 90 bp TCTCCCAACAGACAAGAACATGTAGAGACTAGTGTACAATATGTCTaGATGCTGGACAATTGGAGGTCAGGGATAGAGGAGAGCCTTTTA +
Preference number: 1 (lower is better)
Translates to: SPNRQEHVETSVQYV*MLDNWRSGIEESLL
Trigger: TAAAAGGCTCTCCTCTATCCCTGACCTCCAATTGTCCAGCATTCAGACATATTGTACACTAGTCTCTACATGTTCTTGTCTGTTGGGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
3UTR TCA 90 bp AGGACTAAATTCTATCAACTTGGCAGTTCCTTCTTCTGCAAGAAATaGTATAGACTGGTCCATGCCTCCTCCTTCAGTGCCAATGTAACG +
Preference number: 1 (lower is better)
Translates to: RTKFYQLGSSFFCKK*YRLVHASSFSANVT
Trigger: CGTTACATTGGCACTGAAGGAGGAGGCATGGACCAGTCTATATCATTTCTTGCAGAAGAAGGAACTGCCAAGTTGATAGAATTTAGTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559423.5
ENST00000560119.5
3UTR CCA 90 bp ATTCATCTCCACACAACTGTTGGCAATCACAAACACTGCTCCACTTaGGAGTTTTACATCGGTTGCCCTCAGAGGACTAAATTCTATCAA +
Preference number: 1 (lower is better)
Translates to: IHLHTTVGNHKHCST*EFYIGCPQRTKFYQ
Trigger: TTGATAGAATTTAGTCCTCTGAGGGCAACCGATGTAAAACTCCCAAGTGGAGCAGTGTTTGTGATTGCCAACAGTTGTGTGGAGATGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559423.5
ENST00000560119.5
3UTR TCA 90 bp AAGCCAGTCATTTGCCATCACCAGCCAAACATTTCTGCCCACTCTTaGTATACATACAGAGATACCCATCAATACCATTACAAATCCCAG +
Preference number: 1 (lower is better)
Translates to: KPVICHHQPNISAHS*YTYRDTHQYHYKSQ
Trigger: CTGGGATTTGTAATGGTATTGATGGGTATCTCTGTATGTATATCAAGAGTGGGCAGAAATGTTTGGCTGGTGATGGCAAATGACTGGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
3UTR CCA 90 bp TATTATTTTCATAGCGTTCCGAAGCTGAAATTGAGAGAGAATGTGTaGCATCACTATCGTCATCATCATCATCATCACCATCATCAACAG +
Preference number: 1 (lower is better)
Translates to: YYFHSVPKLKLRENV*HHYRHHHHHHHHQQ
Trigger: CTGTTGATGATGGTGATGATGATGATGATGACGATAGTGATGCCACACATTCTCTCTCAATTTCAGCTTCGGAACGCTATGAAAATAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
3UTR CCA 90 bp AATTCAACAAAATCATATTGGGTACCAACAGCTGTGTTAGATGAATaGTCCCTGCCCTCAATTATCAAGGCAGAATATGATAAGGTTCTA +
Preference number: 1 (lower is better)
Translates to: NSTKSYWVPTAVLDE*SLPSIIKAEYDKVL
Trigger: TAGAACCTTATCATATTCTGCCTTGATAATTGAGGGCAGGGACCATTCATCTAACACAGCTGTTGGTACCCAATATGATTTTGTTGAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
3UTR-3UTR CCA 90 bp CTGGTCCATGCCTCCTCCTTCAGTGCCAATGTAACGCTCACTCTTGGCACAGATGTCCCTCCTGCTGTGTaGCCCACTTCTGAACAGGCC +
Preference number: 2 (lower is better)
Translates to: LVHASSFSANVTLTLGTDVPPAV*PTSEQA
Trigger: GGCCTGTTCAGAAGTGGGCCACACAGCAGGAGGGAC...ATCTGTGCCAAGAGTGAGCGTTACATTGGCACTGAAGGAGGAGGCATGGACCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559208.5
ENST00000559423.5
3UTR-3UTR CCA 90 bp GGCCAGAACTTGGTGGGATATTTCCATCTACCAGGCAGTTCATTCCAGTCAGGTGTCCCTCCTGCTGTGTaGCCCACTTCTGAACAGGCC +
Preference number: 2 (lower is better)
Translates to: GQNLVGYFHLPGSSFQSGVPPAV*PTSEQA
Trigger: GGCCTGTTCAGAAGTGGGCCACACAGCAGGAGGGAC...ACCTGACTGGAATGAACTGCCTGGTAGATGGAAATATCCCACCAAGTTCTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559208.5
ENST00000559423.5
3UTR-3UTR TCA 90 bp CTCCTTCAGTGCCAATGTAACGCTCACTCTTGGCACAGATTTCTGCAAGTTCCATCCTTCCCAGCACTGTaGGCGTCACCAAGCCAGCAC +
Preference number: 2 (lower is better)
Translates to: LLQCQCNAHSWHRFLQVPSFPAL*ASPSQH
Trigger: GTGCTGGCTTGGTGACGCTCACAGTGCTGGGAAGGA...TGGAACTTGCAGAAATCTGTGCCAAGAGTGAGCGTTACATTGGCACTGAAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000559208.5
ENST00000559423.5
ENST00000559883.5
ENST00000560119.5
3UTR CAA 90 bp GCGATAGAGCACGACTCCGTCATCTTGAGTGTTTGGACTCAGGATTaGGGTTCGGAGTTCCTCCAGGCTAATTCCCAGACACCTGCAGAT +
Preference number: 2 (lower is better)
Translates to: AIEHDSVILSVWTQD*GSEFLQANSQTPAD
Trigger: ATCTGCAGGTGTCTGGGAATTAGCCTGGAGGAACTCCGAACCCAAATCCTGAGTCCAAACACTCAAGATGACGGAGTCGTGCTCTATCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560119.5
3UTR-3UTR GCA 90 bp TGTGGGCCAAACTATATACATCTGCAGACCAGATGTGGCCCATGGGCTGCTGGGTGCTCATCTGCAGTGTaGACTCCACAGCTTTTAAAC +
Preference number: 2 (lower is better)
Translates to: CGPNYIHLQTRCGPWAAGCSSAV*TPQLLN
Trigger: GTTTAAAAGCTGTGGAGTGCACACTGCAGATGAGCA...CCCAGCAGCCCATGGGCCACATCTGGTCTGCAGATGTATATAGTTTGGCCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
3UTR-3UTR CCA 90 bp CTGGAGAGGCCAGAACTTGGTGGGATATTTCCATCTACCAGGCAGTTCATTCCAAACAGACCAAAGCACTaGAGCTGGAGAGGCCAGAAC +
Preference number: 2 (lower is better)
Translates to: LERPELGGIFPSTRQFIPNRPKH*SWRGQN
Trigger: GTTCTGGCCTCTCCAGCTCCAGTGCTTTGGTCTGTT...TGGAATGAACTGCCTGGTAGATGGAAATATCCCACCAAGTTCTGGCCTCTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558775.5
ENST00000559208.5
ENST00000559423.5
ENST00000559883.5
ENST00000559963.5
ENST00000560119.5
3UTR CAA 90 bp TTAGCCAGGAGCTTCGCAGCCAGCCGACACTCCATCACCCTGATATaGAAATGGGAAGTTGCTGCCTTATTCATCTCCACACAACTGTTG +
Preference number: 2 (lower is better)
Translates to: LARSFAASRHSITLI*KWEVAALFISTQLL
Trigger: CAACAGTTGTGTGGAGATGAATAAGGCAGCAACTTCCCATTTCAATATCAGGGTGATGGAGTGTCGGCTGGCTGCGAAGCTCCTGGCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560119.5
3UTR CAA 90 bp AGACTAATCCCTAGTTTAGCCTGCACCTCCTCCAGCCTCAGTACTTaGTCCCATTGCAAGCTTTTGTATTTAGCCAGGAGCTTCGCAGCC +
Preference number: 2 (lower is better)
Translates to: RLIPSLACTSSSLST*SHCKLLYLARSFAA
Trigger: GGCTGCGAAGCTCCTGGCTAAATACAAAAGCTTGCAATGGGACAAAGTACTGAGGCTGGAGGAGGTGCAGGCTAAACTAGGGATTAGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560119.5
3UTR-3UTR TCA 90 bp GAGAGGCCAGAACTTGGTGGGATATTTCCATCTACCAGGCAGTTCATTCCAGTCCTTCTGAACAGGCCATaGAGCAGTAACAGGGATTGG +
Preference number: 2 (lower is better)
Translates to: ERPELGGIFPSTRQFIPVLLNRP*SSNRDW
Trigger: CCAATCCCTGTTACTGCTTCATGGCCTGTTCAGAAG...GACTGGAATGAACTGCCTGGTAGATGGAAATATCCCACCAAGTTCTGGCCTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559208.5
ENST00000559423.5
3UTR-3UTR GCA 90 bp TGTGGGCCAAACTATATACATCTGCAGACCAGATGTGGCCCATGGGCTGCTGGGAGAAAGCCAGTCATTTaGCATCACCAGCCAAACATT +
Preference number: 2 (lower is better)
Translates to: CGPNYIHLQTRCGPWAAGRKPVI*HHQPNI
Trigger: AATGTTTGGCTGGTGATGGCAAATGACTGGCTTTCT...CCCAGCAGCCCATGGGCCACATCTGGTCTGCAGATGTATATAGTTTGGCCCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
3UTR-3UTR GCA 90 bp CAAGCAAAGGCTACCAAGAAACCTCATGAAGTGAAACAGGACTTTGAGAAGTTCGGGACAGCAGGCACATaGCACCACTCCCAGCTAAGG +
Preference number: 2 (lower is better)
Translates to: QAKATKKPHEVKQDFEKFGTAGT*HHSQLR
Trigger: CCTTAGCTGGGAGTGGTGGCATGTGCCTGCTGTCCC...GAACTTCTCAAAGTCCTGTTTCACTTCATGAGGTTTCTTGGTAGCCTTTGCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
3UTR-3UTR CCA 90 bp TGTGGGCCAAACTATATACATCTGCAGACCAGATGTGGCCCATGGGCTGCTGGGCTTGGAAGTGCCTCTTaGATTAGAGAGGTATTTGAG +
Preference number: 2 (lower is better)
Translates to: CGPNYIHLQTRCGPWAAGLGSAS*IREVFE
Trigger: CTCAAATACCTCTCTAATCCAAGAGGCACTTCCAAG...CCCAGCAGCCCATGGGCCACATCTGGTCTGCAGATGTATATAGTTTGGCCCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
3UTR-3UTR CCA 90 bp GCCAGAACTTGGTGGGATATTTCCATCTACCAGGCAGTTCATTCCAGTCAGGTTAGCAGTAACAGGGATTaGGGAACCCTGCTCTACAGG +
Preference number: 2 (lower is better)
Translates to: ARTWWDISIYQAVHSSQVSSNRD*GTLLYR
Trigger: CCTGTAGAGCAGGGTTCCCCAATCCCTGTTACTGCT...AACCTGACTGGAATGAACTGCCTGGTAGATGGAAATATCCCACCAAGTTCTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559208.5
ENST00000559423.5
3UTR-3UTR CCA 90 bp GTCCATGCCTCCTCCTTCAGTGCCAATGTAACGCTCACTCTTGGCACAGATTTCCTGCAAGTTCCACCTTaGATAGATTCCTTCCCAGCA +
Preference number: 2 (lower is better)
Translates to: VHASSFSANVTLTLGTDFLQVPP*IDSFPA
Trigger: TGCTGGGAAGGAATCTATCCAAGGTGGAACTTGCAG...GAAATCTGTGCCAAGAGTGAGCGTTACATTGGCACTGAAGGAGGAGGCATGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000559208.5
ENST00000559423.5
ENST00000559883.5
ENST00000560119.5
3UTR-3UTR CCA 90 bp GCGATAGAGCACGACTCCGTCATCTTGAGTGTTTGGACTCAGGATTTGGGTTCGCTGCAAGTTCCACCTTaGATAGATTCCTTCCCAGCA +
Preference number: 2 (lower is better)
Translates to: AIEHDSVILSVWTQDLGSLQVPP*IDSFPA
Trigger: TGCTGGGAAGGAATCTATCCAAGGTGGAACTTGCAG...CGAACCCAAATCCTGAGTCCAAACACTCAAGATGACGGAGTCGTGCTCTATCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560119.5
3UTR-3UTR TCA 90 bp TGTGGGCCAAACTATATACATCTGCAGACCAGATGTGGCCCATGGGCTGCTGGGAGATCTGTCCAAGCATaGTCTTGGCTCTTAATAGTA +
Preference number: 2 (lower is better)
Translates to: CGPNYIHLQTRCGPWAAGRSVQA*SWLLIV
Trigger: TACTATTAAGAGCCAAGATCATGCTTGGACAGATCT...CCCAGCAGCCCATGGGCCACATCTGGTCTGCAGATGTATATAGTTTGGCCCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
3UTR-3UTR TCA 90 bp ATCAATCTGGATGTTATTAGCACTAGTACTGAAGTCCCTCCTGCTGTGTGGCCCCTTCTGAACAGGCCATaGAGCAGTAACAGGGATTGG +
Preference number: 2 (lower is better)
Translates to: INLDVISTSTEVPPAVWPLLNRP*SSNRDW
Trigger: CCAATCCCTGTTACTGCTTCATGGCCTGTTCAGAAG...GGGCCACACAGCAGGAGGGACTTCAGTACTAGTGCTAATAACATCCAGATTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558956.5
ENST00000559208.5
ENST00000559423.5
3UTR-3UTR GCA 90 bp CAAGCAAAGGCTACCAAGAAACCTCATGAAGTGAAACAGGACTTTGAGAAGTTCTCTCCCAGGCTGGAGTaGAGTGCTGCAGTCATGGCT +
Preference number: 2 (lower is better)
Translates to: QAKATKKPHEVKQDFEKFSPRLE*SAAVMA
Trigger: AGCCATGACTGCAGCACTGCACTCCAGCCTGGGAGA...GAACTTCTCAAAGTCCTGTTTCACTTCATGAGGTTTCTTGGTAGCCTTTGCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
3UTR-3UTR CCA 90 bp TGGTGGGATATTTCCATCTACCAGGCAGTTCATTCCAGTCAGGTTACTAAGACCAGCAGTAACAGGGATTaGGGAACCCTGCTCTACAGG +
Preference number: 2 (lower is better)
Translates to: WWDISIYQAVHSSQVTKTSSNRD*GTLLYR
Trigger: CCTGTAGAGCAGGGTTCCCCAATCCCTGTTACTGCT...GGTCTTAGTAACCTGACTGGAATGAACTGCCTGGTAGATGGAAATATCCCACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559208.5
ENST00000559423.5
3UTR-3UTR CCA 90 bp GGCCAGAACTTGGTGGGATATTTCCATCTACCAGGCAGTTCATTCCAGTCAGGTGAGGCCAGAACTTGGTaGGATATTTCCATCTACCAG +
Preference number: 2 (lower is better)
Translates to: GQNLVGYFHLPGSSFQSGEARTW*DISIYQ
Trigger: CTGGTAGATGGAAATATCCCACCAAGTTCTGGCCTC...ACCTGACTGGAATGAACTGCCTGGTAGATGGAAATATCCCACCAAGTTCTGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558775.5
ENST00000559208.5
ENST00000559423.5
ENST00000559883.5
ENST00000559963.5
ENST00000560119.5
3UTR-3UTR CCA 90 bp TGCCTCCTCCTTCAGTGCCAATGTAACGCTCACTCTTGGCACAGATTTCTGCAAGGAGAGGCCAGAACTTaGTGGGATATTTCCATCTAC +
Preference number: 2 (lower is better)
Translates to: CLLLQCQCNAHSWHRFLQGEART*WDISIY
Trigger: GTAGATGGAAATATCCCACCAAGTTCTGGCCTCTCC...TTGCAGAAATCTGTGCCAAGAGTGAGCGTTACATTGGCACTGAAGGAGGAGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000559208.5
ENST00000559423.5
ENST00000559883.5
ENST00000560119.5
3UTR-3UTR CCA 90 bp CTGGTCCATGCCTCCTCCTTCAGTGCCAATGTAACGCTCACTCTTGGCACAGATAGAAATGATATAGACTaGTCCATGCCTCCTCCTTCA +
Preference number: 2 (lower is better)
Translates to: LVHASSFSANVTLTLGTDRNDID*SMPPPS
Trigger: TGAAGGAGGAGGCATGGACCAGTCTATATCATTTCT...ATCTGTGCCAAGAGTGAGCGTTACATTGGCACTGAAGGAGGAGGCATGGACCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000559208.5
ENST00000559423.5
ENST00000560119.5
3UTR-3UTR CCA 90 bp GGCGATAGAGCACGACTCCGTCATCTTGAGTGTTTGGACTCAGGATTTGGGTTCTCTCCACACAACTGTTaGCAATCACAAACACTGCTC +
Preference number: 2 (lower is better)
Translates to: GDRARLRHLECLDSGFGFSPHNC*QSQTLL
Trigger: GAGCAGTGTTTGTGATTGCCAACAGTTGTGTGGAGA...GAACCCAAATCCTGAGTCCAAACACTCAAGATGACGGAGTCGTGCTCTATCGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560119.5
3UTR CAA 90 bp GTGCTAAGCTTCCATCACTCCTCTGGTAATAAGCTTTGTGCACATTaGCTAGAAAGCTGGGCAGCTTGTCCGCAGGTACCATTGATACTG +
Preference number: 2 (lower is better)
Translates to: VLSFHHSSGNKLCAH*LESWAACPQVPLIL
Trigger: CAGTATCAATGGTACCTGCGGACAAGCTGCCCAGCTTTCTAGCAAATGTGCACAAAGCTTATTACCAGAGGAGTGATGGAAGCTTAGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560119.5
3UTR-3UTR TCA 90 bp TGCCAATGTAACGCTCACTCTTGGCACAGATTTCTGCAAGTTCCACCTTGGATACTTCTGAACAGGCCATaGAGCAGTAACAGGGATTGG +
Preference number: 2 (lower is better)
Translates to: CQCNAHSWHRFLQVPPWILLNRP*SSNRDW
Trigger: CCAATCCCTGTTACTGCTTCATGGCCTGTTCAGAAG...TATCCAAGGTGGAACTTGCAGAAATCTGTGCCAAGAGTGAGCGTTACATTGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559208.5
ENST00000559423.5
3UTR-3UTR GCA 90 bp TGCCAATGTAACGCTCACTCTTGGCACAGATTTCTGCAAGTTCCACCTTGGATATGCCTCCTCCTTCAGTaGCAATGTAACGCTCACTCT +
Preference number: 2 (lower is better)
Translates to: CQCNAHSWHRFLQVPPWICLLLQ*QCNAHS
Trigger: AGAGTGAGCGTTACATTGGCACTGAAGGAGGAGGCA...TATCCAAGGTGGAACTTGCAGAAATCTGTGCCAAGAGTGAGCGTTACATTGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000559208.5
ENST00000559423.5
ENST00000559883.5
ENST00000560119.5
3UTR-3UTR CCA 90 bp ACTGGTCCATGCCTCCTCCTTCAGTGCCAATGTAACGCTCACTCTTGGCACAGATGTGCCACAAAGGCTTaGTTTTATCAATCTGGATGT +
Preference number: 2 (lower is better)
Translates to: TGPCLLLQCQCNAHSWHRCATKA*FYQSGC
Trigger: ACATCCAGATTGATAAAACCAAGCCTTTGTGGCACA...TCTGTGCCAAGAGTGAGCGTTACATTGGCACTGAAGGAGGAGGCATGGACCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000559208.5
ENST00000559423.5
ENST00000559883.5
ENST00000560119.5
3UTR-3UTR CCA 90 bp CTTTTGTATTTAGCCAGGAGCTTCGCAGCCAGCCGACACTCCATCACCCTGATATGTAACGCTCACTCTTaGCACAGATTTCTGCAAGTT +
Preference number: 2 (lower is better)
Translates to: LLYLARSFAASRHSITLICNAHS*HRFLQV
Trigger: AACTTGCAGAAATCTGTGCCAAGAGTGAGCGTTACA...TATCAGGGTGATGGAGTGTCGGCTGGCTGCGAAGCTCCTGGCTAAATACAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560119.5
3UTR-3UTR CCA 90 bp GCCAGAACTTGGTGGGATATTTCCATCTACCAGGCAGTTCATTCCAGTCAGGTTACAAGGGATTTGTATTaGCCAGTTGGAGAGCGTACG +
Preference number: 2 (lower is better)
Translates to: ARTWWDISIYQAVHSSQVTRDLY*PVGERT
Trigger: CGTACGCTCTCCAACTGGCCAATACAAATCCCTTGT...AACCTGACTGGAATGAACTGCCTGGTAGATGGAAATATCCCACCAAGTTCTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000558775.5
ENST00000559883.5
ENST00000559963.5
3UTR-3UTR TCA 90 bp TGCCAATGTAACGCTCACTCTTGGCACAGATTTCTGCAAGTTCCACCTTGGATAGCTCTCCTATTATGTTaGCTCTTCCTGGTGCTCGAA +
Preference number: 2 (lower is better)
Translates to: CQCNAHSWHRFLQVPPWIALLLC*LFLVLE
Trigger: TTCGAGCACCAGGAAGAGTCAACATAATAGGAGAGC...TATCCAAGGTGGAACTTGCAGAAATCTGTGCCAAGAGTGAGCGTTACATTGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559883.5
3UTR-3UTR TCA 90 bp AAGTCCGGATACAAGGGATTTGTATTGGCCAGTTGGAGAGCGTACGTTTTCACAGCTCTCCTATTATGTTaGCTCTTCCTGGTGCTCGAA +
Preference number: 2 (lower is better)
Translates to: KSGYKGFVLASWRAYVFTALLLC*LFLVLE
Trigger: TTCGAGCACCAGGAAGAGTCAACATAATAGGAGAGC...TGTGAAAACGTACGCTCTCCAACTGGCCAATACAAATCCCTTGTATCCGGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559883.5
ENST00000559963.5
3UTR-3UTR GCA 90 bp CGGATACAAGGGATTTGTATTGGCCAGTTGGAGAGCGTACGTTTTCACAGGTTCGTTGACTCTTCCTGGTaGTCGAACATAAAACTTGGG +
Preference number: 2 (lower is better)
Translates to: RIQGICIGQLESVRFHRFVDSSW*SNIKLG
Trigger: CCCAAGTTTTATGTTCGAGCACCAGGAAGAGTCAAC...GAACCTGTGAAAACGTACGCTCTCCAACTGGCCAATACAAATCCCTTGTATCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000558775.5
ENST00000559883.5
ENST00000559963.5
3UTR-3UTR CCA 90 bp TTTCATAAGCAATGTATGGTGGCACACCCAAATTACAGTGGCAGGAGAGGATACGCAGTGCTGCAGTCATaGCTCACTGTAGCTTTGAAG +
Preference number: 2 (lower is better)
Translates to: FHKQCMVAHPNYSGRRGYAVLQS*LTVALK
Trigger: CTTCAAAGCTACAGTGAGCCATGACTGCAGCACTGC...GTATCCTCTCCTGCCACTGTAATTTGGGTGTGCCACCATACATTGCTTATGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
3UTR-3UTR CCA 90 bp TCCATCTACCAGGCAGTTCATTCCAGTCAGGTTACTAAGACCAAAGTGTTCCTGGAGGCCAGAACTTGGTaGGATATTTCCATCTACCAG +
Preference number: 2 (lower is better)
Translates to: SIYQAVHSSQVTKTKVFLEARTW*DISIYQ
Trigger: CTGGTAGATGGAAATATCCCACCAAGTTCTGGCCTC...CAGGAACACTTTGGTCTTAGTAACCTGACTGGAATGAACTGCCTGGTAGATGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558775.5
ENST00000559208.5
ENST00000559423.5
ENST00000559883.5
ENST00000559963.5
ENST00000560119.5
3UTR-3UTR CCA 90 bp TGCCAATGTAACGCTCACTCTTGGCACAGATTTCTGCAAGTTCCACCTTGGATAGGAGAGGCCAGAACTTaGTGGGATATTTCCATCTAC +
Preference number: 2 (lower is better)
Translates to: CQCNAHSWHRFLQVPPWIGEART*WDISIY
Trigger: GTAGATGGAAATATCCCACCAAGTTCTGGCCTCTCC...TATCCAAGGTGGAACTTGCAGAAATCTGTGCCAAGAGTGAGCGTTACATTGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000559208.5
ENST00000559423.5
ENST00000559883.5
ENST00000560119.5
3UTR-3UTR CCA 90 bp AGTTTTACATCGGTTGCCCTCAGAGGACTAAATTCTATCAACTTGGCAGTTCCTAACAGACCAAAGCACTaGAGCTGGAGAGGCCAGAAC +
Preference number: 2 (lower is better)
Translates to: SFTSVALRGLNSINLAVPNRPKH*SWRGQN
Trigger: GTTCTGGCCTCTCCAGCTCCAGTGCTTTGGTCTGTT...AGGAACTGCCAAGTTGATAGAATTTAGTCCTCTGAGGGCAACCGATGTAAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559423.5
ENST00000560119.5
3UTR-3UTR CCA 90 bp ATTTCCATCTACCAGGCAGTTCATTCCAGTCAGGTTACTAAGACCAAAGTGTTCAACAGACCAAAGCACTaGAGCTGGAGAGGCCAGAAC +
Preference number: 2 (lower is better)
Translates to: ISIYQAVHSSQVTKTKVFNRPKH*SWRGQN
Trigger: GTTCTGGCCTCTCCAGCTCCAGTGCTTTGGTCTGTT...GAACACTTTGGTCTTAGTAACCTGACTGGAATGAACTGCCTGGTAGATGGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558775.5
ENST00000559208.5
ENST00000559423.5
ENST00000559883.5
ENST00000559963.5
ENST00000560119.5
3UTR-3UTR CCA 90 bp AGGCCAGAACTTGGTGGGATATTTCCATCTACCAGGCAGTTCATTCCAGTCAGGTTTGTATTGGCCAGTTaGAGAGCGTACGTTTTCACA +
Preference number: 2 (lower is better)
Translates to: RPELGGIFPSTRQFIPVRFVLAS*RAYVFT
Trigger: TGTGAAAACGTACGCTCTCCAACTGGCCAATACAAA...CCTGACTGGAATGAACTGCCTGGTAGATGGAAATATCCCACCAAGTTCTGGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558775.5
ENST00000559883.5
ENST00000559963.5
3UTR-3UTR TCA 90 bp ATCTTATTCTTCACTACATACCAAAGCAAAGCCTTCACTCTCACTGAGCCTCCTATCCCTCGCTTAGAATaGCCATGTGTGTCCCCCAAA +
Preference number: 2 (lower is better)
Translates to: ILFFTTYQSKAFTLTEPPIPRLE*PCVSPK
Trigger: TTTGGGGGACACACATGGTCATTCTAAGCGAGGGAT...AGGAGGCTCAGTGAGAGTGAAGGCTTTGCTTTGGTATGTAGTGAAGAATAAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
3UTR-3UTR TCA 90 bp CAAGCAAAGGCTACCAAGAAACCTCATGAAGTGAAACAGGACTTTGAGAAGTTCCTGATAAAGGGCAAGTaGCCTCAGCTGGTAAGTGGT +
Preference number: 2 (lower is better)
Translates to: QAKATKKPHEVKQDFEKFLIKGK*PQLVSG
Trigger: ACCACTTACCAGCTGAGGTCACTTGCCCTTTATCAG...GAACTTCTCAAAGTCCTGTTTCACTTCATGAGGTTTCTTGGTAGCCTTTGCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
3UTR-3UTR TCA 90 bp AGAGCGTACGTTTTCACAGGTTCTACAGCTATTAGCACATCTTGTTCTACAGCCGCTCTCCTATTATGTTaGCTCTTCCTGGTGCTCGAA +
Preference number: 2 (lower is better)
Translates to: RAYVFTGSTAISTSCSTAALLLC*LFLVLE
Trigger: TTCGAGCACCAGGAAGAGTCAACATAATAGGAGAGC...GGCTGTAGAACAAGATGTGCTAATAGCTGTAGAACCTGTGAAAACGTACGCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000559883.5
ENST00000559963.5
ENST00000561074.5
3UTR-3UTR GCA 90 bp GCAGGAGAGGATACATTCTTGTTACTTAATCATCTACATGCACATGTAAGAAAAGGGACAGCAGGCACATaGCACCACTCCCAGCTAAGG +
Preference number: 2 (lower is better)
Translates to: AGEDTFLLLNHLHAHVRKGTAGT*HHSQLR
Trigger: CCTTAGCTGGGAGTGGTGGCATGTGCCTGCTGTCCC...TTTTCTTACATGTGCATGTAGATGATTAAGTAACAAGAATGTATCCTCTCCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
3UTR-3UTR GCA 90 bp GGATACAAGGGATTTGTATTGGCCAGTTGGAGAGCGTACGTTTTCACAGGTTCTGTTGACTCTTCCTGGTaGTCGAACATAAAACTTGGG +
Preference number: 2 (lower is better)
Translates to: GYKGFVLASWRAYVFTGSVDSSW*SNIKLG
Trigger: CCCAAGTTTTATGTTCGAGCACCAGGAAGAGTCAAC...AGAACCTGTGAAAACGTACGCTCTCCAACTGGCCAATACAAATCCCTTGTATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000558775.5
ENST00000559883.5
ENST00000559963.5
3UTR-3UTR GCA 90 bp GCCAGTTGGAGAGCGTACGTTTTCACAGGTTCTACAGCTATTAGCACATCTTGTGTTGACTCTTCCTGGTaGTCGAACATAAAACTTGGG +
Preference number: 2 (lower is better)
Translates to: ASWRAYVFTGSTAISTSCVDSSW*SNIKLG
Trigger: CCCAAGTTTTATGTTCGAGCACCAGGAAGAGTCAAC...ACAAGATGTGCTAATAGCTGTAGAACCTGTGAAAACGTACGCTCTCCAACTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000558775.5
ENST00000559883.5
ENST00000559963.5
ENST00000561074.5
3UTR-3UTR CCA 90 bp GAGGCCAGAACTTGGTGGGATATTTCCATCTACCAGGCAGTTCATTCCAGTCAGTGTGCCACAAAGGCTTaGTTTTATCAATCTGGATGT +
Preference number: 2 (lower is better)
Translates to: EARTWWDISIYQAVHSSQCATKA*FYQSGC
Trigger: ACATCCAGATTGATAAAACCAAGCCTTTGTGGCACA...CTGACTGGAATGAACTGCCTGGTAGATGGAAATATCCCACCAAGTTCTGGCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558775.5
ENST00000559208.5
ENST00000559423.5
ENST00000559883.5
ENST00000559963.5
ENST00000560119.5
3UTR-3UTR CCA 90 bp TGCCTCCTCCTTCAGTGCCAATGTAACGCTCACTCTTGGCACAGATTTCTGCAATGTGCCACAAAGGCTTaGTTTTATCAATCTGGATGT +
Preference number: 2 (lower is better)
Translates to: CLLLQCQCNAHSWHRFLQCATKA*FYQSGC
Trigger: ACATCCAGATTGATAAAACCAAGCCTTTGTGGCACA...TTGCAGAAATCTGTGCCAAGAGTGAGCGTTACATTGGCACTGAAGGAGGAGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000559208.5
ENST00000559423.5
ENST00000559883.5
ENST00000560119.5
3UTR-3UTR TCA 90 bp CACACAACTGTTGGCAATCACAAACACTGCTCCACTTGGGAGTTTTACATCGGTTTCTTCTGCAAGAAATaGTATAGACTGGTCCATGCC +
Preference number: 2 (lower is better)
Translates to: HTTVGNHKHCSTWEFYIGFFCKK*YRLVHA
Trigger: GGCATGGACCAGTCTATATCATTTCTTGCAGAAGAA...ACCGATGTAAAACTCCCAAGTGGAGCAGTGTTTGTGATTGCCAACAGTTGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559423.5
ENST00000560119.5
3UTR-3UTR TCA 90 bp GGATACAAGGGATTTGTATTGGCCAGTTGGAGAGCGTACGTTTTCACAGGTTCTAGAAAGCTATTATGTTaGCTCTTCCTGGTGCTCGAA +
Preference number: 2 (lower is better)
Translates to: GYKGFVLASWRAYVFTGSRKLLC*LFLVLE
Trigger: TTCGAGCACCAGGAAGAGTCAACATAATAGCTTTCT...AGAACCTGTGAAAACGTACGCTCTCCAACTGGCCAATACAAATCCCTTGTATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558775.5
3UTR-3UTR GCA 90 bp TTTCAGCATGTCAAGGCTTCCATTCAAAAATCTAGAGCAATCCCATTGGCTGCTTGGCACAGAAAGTCCTaGCAATTCCTAAGTGCCCTA +
Preference number: 2 (lower is better)
Translates to: FQHVKASIQKSRAIPLAAWHRKS*QFLSAL
Trigger: TAGGGCACTTAGGAATTGGCAGGACTTTCTGTGCCA...AGCAGCCAATGGGATTGCTCTAGATTTTTGAATGGAAGCCTTGACATGCTGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
3UTR-3UTR GCA 90 bp GGACAATATTTCATAAGCAATGTATGGTGGCACACCCAAATTACAGTGGCAGGATGGCACAGAAAGTCCTaGCAATTCCTAAGTGCCCTA +
Preference number: 2 (lower is better)
Translates to: GQYFISNVWWHTQITVAGWHRKS*QFLSAL
Trigger: TAGGGCACTTAGGAATTGGCAGGACTTTCTGTGCCA...TCCTGCCACTGTAATTTGGGTGTGCCACCATACATTGCTTATGAAATATTGTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
3UTR-3UTR CCA 90 bp AAAGGCTTGGTTTTATCAATCTGGATGTTATTAGCACTAGTACTGAAGTCCCTCAGCAGTAACAGGGATTaGGGAACCCTGCTCTACAGG +
Preference number: 2 (lower is better)
Translates to: KGLVLSIWMLLALVLKSLSSNRD*GTLLYR
Trigger: CCTGTAGAGCAGGGTTCCCCAATCCCTGTTACTGCT...GAGGGACTTCAGTACTAGTGCTAATAACATCCAGATTGATAAAACCAAGCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558956.5
ENST00000559208.5
ENST00000559423.5
3UTR-3UTR CCA 90 bp AGCACTAGTACTGAAGTCCGGATACAAGGGATTTGTATTGGCCAGTTGGAGAGCTGTGCCACAAAGGCTTaGTTTTATCAATCTGGATGT +
Preference number: 2 (lower is better)
Translates to: STSTEVRIQGICIGQLESCATKA*FYQSGC
Trigger: ACATCCAGATTGATAAAACCAAGCCTTTGTGGCACA...GCTCTCCAACTGGCCAATACAAATCCCTTGTATCCGGACTTCAGTACTAGTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558775.5
ENST00000559883.5
ENST00000559963.5
3UTR-3UTR CCA 90 bp TTGAAATGGGAAGTTGCTGCCTTATTCATCTCCACACAACTGTTGGCAATCACAGGAGAGGCCAGAACTTaGTGGGATATTTCCATCTAC +
Preference number: 2 (lower is better)
Translates to: LKWEVAALFISTQLLAITGEART*WDISIY
Trigger: GTAGATGGAAATATCCCACCAAGTTCTGGCCTCTCC...TGTGATTGCCAACAGTTGTGTGGAGATGAATAAGGCAGCAACTTCCCATTTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559423.5
ENST00000560119.5
3UTR-3UTR CCA 90 bp TGGGATATTTCCATCTACCAGGCAGTTCATTCCAGTCAGGTTACTAAGACCAAAACAAGGGATTTGTATTaGCCAGTTGGAGAGCGTACG +
Preference number: 2 (lower is better)
Translates to: WDISIYQAVHSSQVTKTKTRDLY*PVGERT
Trigger: CGTACGCTCTCCAACTGGCCAATACAAATCCCTTGT...TTTGGTCTTAGTAACCTGACTGGAATGAACTGCCTGGTAGATGGAAATATCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558775.5
ENST00000559883.5
ENST00000559963.5
3UTR CAA 90 bp CAGAAAGTGCTTCCTATAGTCCATCCACAAGAGAAAGCCAGTCATTaGCCATCACCAGCCAAACATTTCTGCCCACTCTTGATATACATA +
Preference number: 2 (lower is better)
Translates to: QKVLPIVHPQEKASH*PSPAKHFCPLLIYI
Trigger: TATGTATATCAAGAGTGGGCAGAAATGTTTGGCTGGTGATGGCAAATGACTGGCTTTCTCTTGTGGATGGACTATAGGAAGCACTTTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
3UTR-3UTR TCA 90 bp AAACACTGCTCCACTTGGGAGTTTTACATCGGTTGCCCTCAGAGGACTAAATTCAGATCTGTCCAAGCATaGTCTTGGCTCTTAATAGTA +
Preference number: 2 (lower is better)
Translates to: KHCSTWEFYIGCPQRTKFRSVQA*SWLLIV
Trigger: TACTATTAAGAGCCAAGATCATGCTTGGACAGATCT...GAATTTAGTCCTCTGAGGGCAACCGATGTAAAACTCCCAAGTGGAGCAGTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560119.5
3UTR-3UTR TCA 90 bp TATGGTGGCACACCCAAATTACAGTGGCAGGAGAGGATACATTCTTGTTACTTACCCATTTCCAGCTTCTaGCCAGGAACAGTTTATGTA +
Preference number: 2 (lower is better)
Translates to: YGGTPKLQWQERIHSCYLPISSF*PGTVYV
Trigger: TACATAAACTGTTCCTGGTCAGAAGCTGGAAATGGG...TAAGTAACAAGAATGTATCCTCTCCTGCCACTGTAATTTGGGTGTGCCACCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
3UTR-3UTR GCA 90 bp AGACTCCAAGCAAAGGCTACCAAGAAACCTCATGAAGTGAAACAGGACTTTGAGACATACCTGCATACCTaGTTTACAATGGGGTGCATA +
Preference number: 2 (lower is better)
Translates to: RLQAKATKKPHEVKQDFETYLHT*FTMGCI
Trigger: TATGCACCCCATTGTAAAGCAGGTATGCAGGTATGT...CTCAAAGTCCTGTTTCACTTCATGAGGTTTCTTGGTAGCCTTTGCTTGGAGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
3UTR-3UTR GCA 90 bp TTTCATAAGCAATGTATGGTGGCACACCCAAATTACAGTGGCAGGAGAGGATACAGAAAGCCAGTCATTTaGCATCACCAGCCAAACATT +
Preference number: 2 (lower is better)
Translates to: FHKQCMVAHPNYSGRRGYRKPVI*HHQPNI
Trigger: AATGTTTGGCTGGTGATGGCAAATGACTGGCTTTCT...GTATCCTCTCCTGCCACTGTAATTTGGGTGTGCCACCATACATTGCTTATGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
3UTR-3UTR GCA 90 bp GGACAATATTTCATAAGCAATGTATGGTGGCACACCCAAATTACAGTGGCAGGATATACCCATAGGCTTTaGTCATCTGCAGTGTGCACT +
Preference number: 2 (lower is better)
Translates to: GQYFISNVWWHTQITVAGYTHRL*SSAVCT
Trigger: AGTGCACACTGCAGATGAGCAAAGCCTATGGGTATA...TCCTGCCACTGTAATTTGGGTGTGCCACCATACATTGCTTATGAAATATTGTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
3UTR-3UTR CCA 90 bp AGACTCCAAGCAAAGGCTACCAAGAAACCTCATGAAGTGAAACAGGACTTTGAGAATATGTCTGAATGCTaGACAATTGGAGGTCAGGGA +
Preference number: 2 (lower is better)
Translates to: RLQAKATKKPHEVKQDFENMSEC*TIGGQG
Trigger: TCCCTGACCTCCAATTGTCCAGCATTCAGACATATT...CTCAAAGTCCTGTTTCACTTCATGAGGTTTCTTGGTAGCCTTTGCTTGGAGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
3UTR-3UTR CCA 90 bp CTGAAGTCCGGATACAAGGGATTTGTATTGGCCAGTTGGAGAGCGTACGTTTTCTATGTTGACTCTTCCTaGTGCTCGAACATAAAACTT +
Preference number: 2 (lower is better)
Translates to: LKSGYKGFVLASWRAYVFYVDSS*CSNIKL
Trigger: AAGTTTTATGTTCGAGCACCAGGAAGAGTCAACATA...GAAAACGTACGCTCTCCAACTGGCCAATACAAATCCCTTGTATCCGGACTTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000558775.5
ENST00000559883.5
ENST00000559963.5
3UTR-3UTR CCA 90 bp TGCCAATGTAACGCTCACTCTTGGCACAGATTTCTGCAAGTTCCACCTTGGATATGTGCCACAAAGGCTTaGTTTTATCAATCTGGATGT +
Preference number: 2 (lower is better)
Translates to: CQCNAHSWHRFLQVPPWICATKA*FYQSGC
Trigger: ACATCCAGATTGATAAAACCAAGCCTTTGTGGCACA...TATCCAAGGTGGAACTTGCAGAAATCTGTGCCAAGAGTGAGCGTTACATTGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000559208.5
ENST00000559423.5
ENST00000559883.5
ENST00000560119.5
3UTR-3UTR CCA 90 bp TCCATCTACCAGGCAGTTCATTCCAGTCAGGTTACTAAGACCAAAGTGTTCCTGTGTGCCACAAAGGCTTaGTTTTATCAATCTGGATGT +
Preference number: 2 (lower is better)
Translates to: SIYQAVHSSQVTKTKVFLCATKA*FYQSGC
Trigger: ACATCCAGATTGATAAAACCAAGCCTTTGTGGCACA...CAGGAACACTTTGGTCTTAGTAACCTGACTGGAATGAACTGCCTGGTAGATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558775.5
ENST00000559208.5
ENST00000559423.5
ENST00000559883.5
ENST00000559963.5
ENST00000560119.5
3UTR CAA 90 bp ATATTGAAATGGGAAGTTGCTGCCTTATTCATCTCCACACAACTGTaGGCAATCACAAACACTGCTCCACTTGGGAGTTTTACATCGGTT +
Preference number: 2 (lower is better)
Translates to: ILKWEVAALFISTQL*AITNTAPLGSFTSV
Trigger: AACCGATGTAAAACTCCCAAGTGGAGCAGTGTTTGTGATTGCCAACAGTTGTGTGGAGATGAATAAGGCAGCAACTTCCCATTTCAATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559423.5
ENST00000560119.5
3UTR-3UTR TCA 90 bp GGACAATATTTCATAAGCAATGTATGGTGGCACACCCAAATTACAGTGGCAGGAAGTGTACAATATGTCTaGATGCTGGACAATTGGAGG +
Preference number: 2 (lower is better)
Translates to: GQYFISNVWWHTQITVAGSVQYV*MLDNWR
Trigger: CCTCCAATTGTCCAGCATTCAGACATATTGTACACT...TCCTGCCACTGTAATTTGGGTGTGCCACCATACATTGCTTATGAAATATTGTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
3UTR-3UTR GCA 90 bp CAAGCAAAGGCTACCAAGAAACCTCATGAAGTGAAACAGGACTTTGAGAAGTTCCATCTTTTAGGGCCATaGTCAAAGTCCATTTACTGC +
Preference number: 2 (lower is better)
Translates to: QAKATKKPHEVKQDFEKFHLLGP*SKSIYC
Trigger: GCAGTAAATGGACTTTGAGCATGGCCCTAAAAGATG...GAACTTCTCAAAGTCCTGTTTCACTTCATGAGGTTTCTTGGTAGCCTTTGCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
3UTR-3UTR GCA 90 bp TTTCAGCATGTCAAGGCTTCCATTCAAAAATCTAGAGCAATCCCATTGGCTGCTCATCTTTTAGGGCCATaGTCAAAGTCCATTTACTGC +
Preference number: 2 (lower is better)
Translates to: FQHVKASIQKSRAIPLAAHLLGP*SKSIYC
Trigger: GCAGTAAATGGACTTTGAGCATGGCCCTAAAAGATG...AGCAGCCAATGGGATTGCTCTAGATTTTTGAATGGAAGCCTTGACATGCTGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
3UTR-3UTR GCA 90 bp AGACTCCAAGCAAAGGCTACCAAGAAACCTCATGAAGTGAAACAGGACTTTGAGATAGGAAAACAACAGTaGAAGTGTCCTGATAAAGGG +
Preference number: 2 (lower is better)
Translates to: RLQAKATKKPHEVKQDFEIGKQQ*KCPDKG
Trigger: CCCTTTATCAGGACACTTGCACTGTTGTTTTCCTAT...CTCAAAGTCCTGTTTCACTTCATGAGGTTTCTTGGTAGCCTTTGCTTGGAGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
3UTR-3UTR GCA 90 bp TTTCATAAGCAATGTATGGTGGCACACCCAAATTACAGTGGCAGGAGAGGATACATAGGAAAACAACAGTaGAAGTGTCCTGATAAAGGG +
Preference number: 2 (lower is better)
Translates to: FHKQCMVAHPNYSGRRGYIGKQQ*KCPDKG
Trigger: CCCTTTATCAGGACACTTGCACTGTTGTTTTCCTAT...GTATCCTCTCCTGCCACTGTAATTTGGGTGTGCCACCATACATTGCTTATGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
3UTR-3UTR GCA 90 bp TTCACAGGTTCTACAGCTATTAGCACATCTTGTTCTACAGCCATAGGAAGAACAGTTGACTCTTCCTGGTaGTCGAACATAAAACTTGGG +
Preference number: 2 (lower is better)
Translates to: FTGSTAISTSCSTAIGRTVDSSW*SNIKLG
Trigger: CCCAAGTTTTATGTTCGAGCACCAGGAAGAGTCAAC...TGTTCTTCCTATGGCTGTAGAACAAGATGTGCTAATAGCTGTAGAACCTGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558775.5
ENST00000559883.5
ENST00000559963.5
ENST00000561074.5
3UTR-3UTR CCA 90 bp CAAGCAAAGGCTACCAAGAAACCTCATGAAGTGAAACAGGACTTTGAGAAGTTCCTTGGAAGTGCCTCTTaGATTAGAGAGGTATTTGAG +
Preference number: 2 (lower is better)
Translates to: QAKATKKPHEVKQDFEKFLGSAS*IREVFE
Trigger: CTCAAATACCTCTCTAATCCAAGAGGCACTTCCAAG...GAACTTCTCAAAGTCCTGTTTCACTTCATGAGGTTTCTTGGTAGCCTTTGCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
3UTR CAA 90 bp AAAGCCAGTCATTTGCCATCACCAGCCAAACATTTCTGCCCACTCTaGATATACATACAGAGATACCCATCAATACCATTACAAATCCCA +
Preference number: 2 (lower is better)
Translates to: KASHLPSPAKHFCPL*IYIQRYPSIPLQIP
Trigger: TGGGATTTGTAATGGTATTGATGGGTATCTCTGTATGTATATCAAGAGTGGGCAGAAATGTTTGGCTGGTGATGGCAAATGACTGGCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
3UTR-3UTR TCA 90 bp CAAGCAAAGGCTACCAAGAAACCTCATGAAGTGAAACAGGACTTTGAGAAGTTCTTTACTCACCTTTTGTaGAGAAGAAATCACCTGGTG +
Preference number: 2 (lower is better)
Translates to: QAKATKKPHEVKQDFEKFFTHLL*RRNHLV
Trigger: CACCAGGTGATTTCTTCTTCACAAAAGGTGAGTAAA...GAACTTCTCAAAGTCCTGTTTCACTTCATGAGGTTTCTTGGTAGCCTTTGCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
3UTR-3UTR GCA 90 bp GGACAATATTTCATAAGCAATGTATGGTGGCACACCCAAATTACAGTGGCAGGACCAGCCAAACATTTCTaGCCACTCTTGATATACATA +
Preference number: 2 (lower is better)
Translates to: GQYFISNVWWHTQITVAGPAKHF*PLLIYI
Trigger: TATGTATATCAAGAGTGGGCAGAAATGTTTGGCTGG...TCCTGCCACTGTAATTTGGGTGTGCCACCATACATTGCTTATGAAATATTGTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
3UTR-3UTR CCA 90 bp TTTCATAAGCAATGTATGGTGGCACACCCAAATTACAGTGGCAGGAGAGGATACGCTTCTCTTTACTTATaGGCATTCTTGTTAAGTCTG +
Preference number: 2 (lower is better)
Translates to: FHKQCMVAHPNYSGRRGYASLYL*AFLLSL
Trigger: CAGACTTAACAAGAATGCCCATAAGTAAAGAGAAGC...GTATCCTCTCCTGCCACTGTAATTTGGGTGTGCCACCATACATTGCTTATGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
3UTR-3UTR CCA 90 bp AGACTCCAAGCAAAGGCTACCAAGAAACCTCATGAAGTGAAACAGGACTTTGAGATACCTGCTTTACAATaGGGTGCATATATACAAACA +
Preference number: 2 (lower is better)
Translates to: RLQAKATKKPHEVKQDFEIPALQ*GAYIQT
Trigger: TGTTTGTATATATGCACCCCATTGTAAAGCAGGTAT...CTCAAAGTCCTGTTTCACTTCATGAGGTTTCTTGGTAGCCTTTGCTTGGAGTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
3UTR-3UTR CCA 90 bp TTTCATAAGCAATGTATGGTGGCACACCCAAATTACAGTGGCAGGAGAGGATACAATCAAATTCCTACATaGGGCAGAAAAGTGATAGAA +
Preference number: 2 (lower is better)
Translates to: FHKQCMVAHPNYSGRRGYNQIPT*GRKVIE
Trigger: TTCTATCACTTTTCTGCCCCATGTAGGAATTTGATT...GTATCCTCTCCTGCCACTGTAATTTGGGTGTGCCACCATACATTGCTTATGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
3UTR-3UTR CCA 90 bp TTTCATAAGCAATGTATGGTGGCACACCCAAATTACAGTGGCAGGAGAGGATACTCAACAAAATCATATTaGGTACCAACAGCTGTGTTA +
Preference number: 2 (lower is better)
Translates to: FHKQCMVAHPNYSGRRGYSTKSY*VPTAVL
Trigger: TAACACAGCTGTTGGTACCCAATATGATTTTGTTGA...GTATCCTCTCCTGCCACTGTAATTTGGGTGTGCCACCATACATTGCTTATGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
3UTR-3UTR CCA 90 bp TGGGATATTTCCATCTACCAGGCAGTTCATTCCAGTCAGGTTACTAAGACCAAATATGTTGACTCTTCCTaGTGCTCGAACATAAAACTT +
Preference number: 2 (lower is better)
Translates to: WDISIYQAVHSSQVTKTKYVDSS*CSNIKL
Trigger: AAGTTTTATGTTCGAGCACCAGGAAGAGTCAACATA...TTTGGTCTTAGTAACCTGACTGGAATGAACTGCCTGGTAGATGGAAATATCCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558775.5
ENST00000559883.5
ENST00000559963.5
3UTR-3UTR CCA 90 bp ATCTACCAGGCAGTTCATTCCAGTCAGGTTACTAAGACCAAAGTGTTCCTGAATTATGTTGACTCTTCCTaGTGCTCGAACATAAAACTT +
Preference number: 2 (lower is better)
Translates to: IYQAVHSSQVTKTKVFLNYVDSS*CSNIKL
Trigger: AAGTTTTATGTTCGAGCACCAGGAAGAGTCAACATA...ATTCAGGAACACTTTGGTCTTAGTAACCTGACTGGAATGAACTGCCTGGTAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558775.5
ENST00000559883.5
ENST00000559963.5
3UTR CAA 90 bp CTGAGTAATCCAGAATATCTGATACTGCTTGTACAATCTCCTGATTaGGAGCCCAAGTTTTTAGTCATTCTGTGGGCCAAACTATATACA +
Preference number: 2 (lower is better)
Translates to: LSNPEYLILLVQSPD*EPKFLVILWAKLYT
Trigger: TGTATATAGTTTGGCCCACAGAATGACTAAAAACTTGGGCTCCAAATCAGGAGATTGTACAAGCAGTATCAGATATTCTGGATTACTCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
3UTR-3UTR CCA 90 bp GGACAATATTTCATAAGCAATGTATGGTGGCACACCCAAATTACAGTGGCAGGAAATCAAATTCCTACATaGGGCAGAAAAGTGATAGAA +
Preference number: 2 (lower is better)
Translates to: GQYFISNVWWHTQITVAGNQIPT*GRKVIE
Trigger: TTCTATCACTTTTCTGCCCCATGTAGGAATTTGATT...TCCTGCCACTGTAATTTGGGTGTGCCACCATACATTGCTTATGAAATATTGTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
3UTR CAA 90 bp GTATGGTGGCACACCCAAATTACAGTGGCAGGAGAGGATACATTCTaGTTACTTAATCATCTACATGCACATGTAAGAAAATCTGTTTTA +
Preference number: 2 (lower is better)
Translates to: VWWHTQITVAGEDTF*LLNHLHAHVRKSVL
Trigger: TAAAACAGATTTTCTTACATGTGCATGTAGATGATTAAGTAACAAGAATGTATCCTCTCCTGCCACTGTAATTTGGGTGTGCCACCATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
3UTR-3UTR TCA 90 bp GCAGGAGAGGATACATTCTTGTTACTTAATCATCTACATGCACATGTAAGAAAACTGGTAAGTGGTAAATaGTTTGAGTGTCAGGGAAAC +
Preference number: 2 (lower is better)
Translates to: AGEDTFLLLNHLHAHVRKLVSGK*FECQGN
Trigger: GTTTCCCTGACACTCAAATCATTTACCACTTACCAG...TTTTCTTACATGTGCATGTAGATGATTAAGTAACAAGAATGTATCCTCTCCTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
3UTR-3UTR GCA 90 bp GCAGGAGAGGATACATTCTTGTTACTTAATCATCTACATGCACATGTAAGAAAAACATACCTGCATACCTaGTTTACAATGGGGTGCATA +
Preference number: 2 (lower is better)
Translates to: AGEDTFLLLNHLHAHVRKTYLHT*FTMGCI
Trigger: TATGCACCCCATTGTAAAGCAGGTATGCAGGTATGT...TTTTCTTACATGTGCATGTAGATGATTAAGTAACAAGAATGTATCCTCTCCTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
3UTR-3UTR TCA 90 bp GCAGGAGAGGATACATTCTTGTTACTTAATCATCTACATGCACATGTAAGAAAAAGATCTGTCCAAGCATaGTCTTGGCTCTTAATAGTA +
Preference number: 2 (lower is better)
Translates to: AGEDTFLLLNHLHAHVRKRSVQA*SWLLIV
Trigger: TACTATTAAGAGCCAAGATCATGCTTGGACAGATCT...TTTTCTTACATGTGCATGTAGATGATTAAGTAACAAGAATGTATCCTCTCCTGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
3UTR-3UTR TCA 90 bp GCAGGAGAGGATACATTCTTGTTACTTAATCATCTACATGCACATGTAAGAAAATTTACTCACCTTTTGTaGAGAAGAAATCACCTGGTG +
Preference number: 2 (lower is better)
Translates to: AGEDTFLLLNHLHAHVRKFTHLL*RRNHLV
Trigger: CACCAGGTGATTTCTTCTTCACAAAAGGTGAGTAAA...TTTTCTTACATGTGCATGTAGATGATTAAGTAACAAGAATGTATCCTCTCCTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
3UTR-3UTR CCA 90 bp ATGCCCTGTAGAAATGTTGGACAAGTAGTATCAGATATTCCACCACTCAGTAATATACCTGCTTTACAATaGGGTGCATATATACAAACA +
Preference number: 2 (lower is better)
Translates to: MPCRNVGQVVSDIPPLSNIPALQ*GAYIQT
Trigger: TGTTTGTATATATGCACCCCATTGTAAAGCAGGTAT...ATTACTGAGTGGTGGAATATCTGATACTACTTGTCCAACATTTCTACAGGGCAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
3UTR CAA 90 bp GAAACTTTAATCATGTATTATTTTCATAGCGTTCCGAAGCTGAAATaGAGAGAGAATGTGTGGCATCACTATCGTCATCATCATCATCAT +
Preference number: 2 (lower is better)
Translates to: ETLIMYYFHSVPKLK*RENVWHHYRHHHHH
Trigger: ATGATGATGATGATGACGATAGTGATGCCACACATTCTCTCTCAATTTCAGCTTCGGAACGCTATGAAAATAATACATGATTAAAGTTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
3UTR CCA 72 bp GGGCAGCTGCACTCATACATGTCCCGGCAGCTCATGTaGCTCTGGTTCATCAACTCTCCCAGCAGCTGGACC +
Preference number: 3 (lower is better)
Translates to: GQLHSYMSRQLM*LWFINSPSSWT
Trigger: GGTCCAGCTGCTGGGAGAGTTGATGAACCAGAGCCACATGAGCTGCCGGGACATGTATGAGTGCAGCTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560119.5
3UTR TCA 72 bp TCCCTCCTGCTGTGTGGCCCACTTCTGAACAGGCCATaGAGCAGTAACAGGGATTGGGGAACCCTGCTCTAC +
Preference number: 3 (lower is better)
Translates to: SLLLCGPLLNRP*SSNRDWGTLLY
Trigger: GTAGAGCAGGGTTCCCCAATCCCTGTTACTGCTTCATGGCCTGTTCAGAAGTGGGCCACACAGCAGGAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558956.5
ENST00000559208.5
ENST00000559423.5
3UTR TCA 72 bp TACTGTGCAGCCTCCCCATCCTGCTCCAGTAAGTCGTaGCCCTTGAGCCCCAAACTTCCGACAGATGTCCAC +
Preference number: 3 (lower is better)
Translates to: YCAASPSCSSKS*PLSPKLPTDVH
Trigger: GTGGACATCTGTCGGAAGTTTGGGGCTCAAGGGTCACGACTTACTGGAGCAGGATGGGGAGGCTGCACAGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560119.5
3UTR GCA 72 bp CTGGAGCACTCGCGCAGCCTCGCTGTACACATGCTTTaGCCGCTGATAGAGTTTGAAGATGAGCACTGGGCA +
Preference number: 3 (lower is better)
Translates to: LEHSRSLAVHML*PLIEFEDEHWA
Trigger: TGCCCAGTGCTCATCTTCAAACTCTATCAGCGGGCAAAGCATGTGTACAGCGAGGCTGCGCGAGTGCTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560119.5
3UTR GCA 72 bp ACAGGCCATGAAGCAGTAACAGGGATTGGGGAACCCTaGTCTACAGGACCAGTCCAAGAATGGTGTGGCCTA +
Preference number: 3 (lower is better)
Translates to: TGHEAVTGIGEP*STGPVQEWCGL
Trigger: TAGGCCACACCATTCTTGGACTGGTCCTGTAGAGCAGGGTTCCCCAATCCCTGTTACTGCTTCATGGCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558956.5
ENST00000559208.5
ENST00000559423.5
3UTR CCA 72 bp TGGGCGATAGAGCACGACTCCGTCATCTTGAGTGTTTaGACTCAGGATTTGGGTTCGGAGTTCCTCCAGGCT +
Preference number: 3 (lower is better)
Translates to: WAIEHDSVILSV*TQDLGSEFLQA
Trigger: AGCCTGGAGGAACTCCGAACCCAAATCCTGAGTCCAAACACTCAAGATGACGGAGTCGTGCTCTATCGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560119.5
3UTR-3UTR CAA 90 bp CTGGTCCATGCCTCCTCCTTCAGTGCCAATGTAACGCTCACTCTTGGCACAGATTGGAGAGGCCAGAACTaGGTGGGATATTTCCATCTA +
Preference number: 3 (lower is better)
Translates to: LVHASSFSANVTLTLGTDWRGQN*VGYFHL
Trigger: TAGATGGAAATATCCCACCAAGTTCTGGCCTCTCCA...ATCTGTGCCAAGAGTGAGCGTTACATTGGCACTGAAGGAGGAGGCATGGACCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000559208.5
ENST00000559423.5
ENST00000559883.5
ENST00000560119.5
3UTR TCA 72 bp CCAGATGTGGCCCATGGGCTGCTGGGCTATAACCCCTaGTCTAAATGCTGCCTGGATTTGACTCTTCAAAAG +
Preference number: 3 (lower is better)
Translates to: PDVAHGLLGYNP*SKCCLDLTLQK
Trigger: CTTTTGAAGAGTCAAATCCAGGCAGCATTTAGATCAGGGGTTATAGCCCAGCAGCCCATGGGCCACATCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
3UTR GCA 72 bp AAAGCCCCACCTCCAGGTTTGGTAGCAAACAAACTTTaGTTCTCCGGTGCTAAGCTTCCATCACTCCTCTGG +
Preference number: 3 (lower is better)
Translates to: KAPPPGLVANKL*FSGAKLPSLLW
Trigger: CCAGAGGAGTGATGGAAGCTTAGCACCGGAGAAGCAAAGTTTGTTTGCTACCAAACCTGGAGGTGGGGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560119.5
3UTR CCA 72 bp TATACATCTGCAGACCAGATGTGGCCCATGGGCTGCTaGGCTATAACCCCTGATCTAAATGCTGCCTGGATT +
Preference number: 3 (lower is better)
Translates to: YTSADQMWPMGC*AITPDLNAAWI
Trigger: AATCCAGGCAGCATTTAGATCAGGGGTTATAGCCCAGCAGCCCATGGGCCACATCTGGTCTGCAGATGTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
3UTR CCA 72 bp GCAGCCAGCCGACACTCCATCACCCTGATATTGAAATaGGAAGTTGCTGCCTTATTCATCTCCACACAACTG +
Preference number: 3 (lower is better)
Translates to: AASRHSITLILK*EVAALFISTQL
Trigger: CAGTTGTGTGGAGATGAATAAGGCAGCAACTTCCCATTTCAATATCAGGGTGATGGAGTGTCGGCTGGCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559423.5
ENST00000560119.5
3UTR CCA 72 bp TGCCTCCTCCTTCAGTGCCAATGTAACGCTCACTCTTaGCACAGATTTCTGCAAGTTCCACCTTGGATAGAT +
Preference number: 3 (lower is better)
Translates to: CLLLQCQCNAHS*HRFLQVPPWID
Trigger: ATCTATCCAAGGTGGAACTTGCAGAAATCTGTGCCAAGAGTGAGCGTTACATTGGCACTGAAGGAGGAGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000559208.5
ENST00000559423.5
ENST00000559883.5
ENST00000560119.5
3UTR CCA 72 bp CTCATGTGGCTCTGGTTCATCAACTCTCCCAGCAGCTaGACCATGTTTTCAGGTGCTTCTTCACATATCTTC +
Preference number: 3 (lower is better)
Translates to: LMWLWFINSPSS*TMFSGASSHIF
Trigger: GAAGATATGTGAAGAAGCACCTGAAAACATGGTCCAGCTGCTGGGAGAGTTGATGAACCAGAGCCACATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560119.5
3UTR-3UTR CAA 90 bp GCCTTATTCATCTCCACACAACTGTTGGCAATCACAAACACTGCTCCACTTGGGTGGAGAGGCCAGAACTaGGTGGGATATTTCCATCTA +
Preference number: 3 (lower is better)
Translates to: ALFISTQLLAITNTAPLGWRGQN*VGYFHL
Trigger: TAGATGGAAATATCCCACCAAGTTCTGGCCTCTCCA...CCCAAGTGGAGCAGTGTTTGTGATTGCCAACAGTTGTGTGGAGATGAATAAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559423.5
ENST00000560119.5
3UTR-3UTR CAA 90 bp AAACACTGCTCCACTTGGGAGTTTTACATCGGTTGCCCTCAGAGGACTAAATTCTCTGCAAGTTCCACCTaGGATAGATTCCTTCCCAGC +
Preference number: 3 (lower is better)
Translates to: KHCSTWEFYIGCPQRTKFSASST*DRFLPS
Trigger: GCTGGGAAGGAATCTATCCAAGGTGGAACTTGCAGA...GAATTTAGTCCTCTGAGGGCAACCGATGTAAAACTCCCAAGTGGAGCAGTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559423.5
ENST00000560119.5
3UTR-3UTR CAA 90 bp GGCCAGAACTTGGTGGGATATTTCCATCTACCAGGCAGTTCATTCCAGTCAGGTATTTGTATTGGCCAGTaGGAGAGCGTACGTTTTCAC +
Preference number: 3 (lower is better)
Translates to: GQNLVGYFHLPGSSFQSGICIGQ*ESVRFH
Trigger: GTGAAAACGTACGCTCTCCAACTGGCCAATACAAAT...ACCTGACTGGAATGAACTGCCTGGTAGATGGAAATATCCCACCAAGTTCTGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558775.5
ENST00000559883.5
ENST00000559963.5
3UTR-3UTR CAA 90 bp CCAGAACTTGGTGGGATATTTCCATCTACCAGGCAGTTCATTCCAGTCAGGTTATGGAGAGGCCAGAACTaGGTGGGATATTTCCATCTA +
Preference number: 3 (lower is better)
Translates to: PELGGIFPSTRQFIPVRLWRGQN*VGYFHL
Trigger: TAGATGGAAATATCCCACCAAGTTCTGGCCTCTCCA...TAACCTGACTGGAATGAACTGCCTGGTAGATGGAAATATCCCACCAAGTTCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558775.5
ENST00000559208.5
ENST00000559423.5
ENST00000559883.5
ENST00000559963.5
ENST00000560119.5
3UTR-3UTR CAA 90 bp TGCCAATGTAACGCTCACTCTTGGCACAGATTTCTGCAAGTTCCACCTTGGATATACAAGGGATTTGTATaGGCCAGTTGGAGAGCGTAC +
Preference number: 3 (lower is better)
Translates to: CQCNAHSWHRFLQVPPWIYKGFV*ASWRAY
Trigger: GTACGCTCTCCAACTGGCCAATACAAATCCCTTGTA...TATCCAAGGTGGAACTTGCAGAAATCTGTGCCAAGAGTGAGCGTTACATTGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559883.5
3UTR TCA 72 bp CTTCACTACATACCAAAGCAAAGCCTTCACTCTCACTaGGCCTCCTACACACACCATGTTTGCCTATACCCA +
Preference number: 3 (lower is better)
Translates to: LHYIPKQSLHSH*ASYTHHVCLYP
Trigger: TGGGTATAGGCAAACATGGTGTGTGTAGGAGGCTCAGTGAGAGTGAAGGCTTTGCTTTGGTATGTAGTGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
3UTR GCA 72 bp CCTACACACACCATGTTTGCCTATACCCATAGGCTTTaGTCATCTGCAGTGTGCACTCCACAGCTTTTAAAC +
Preference number: 3 (lower is better)
Translates to: PTHTMFAYTHRL*SSAVCTPQLLN
Trigger: GTTTAAAAGCTGTGGAGTGCACACTGCAGATGAGCAAAGCCTATGGGTATAGGCAAACATGGTGTGTGTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
3UTR GCA 72 bp ATTCATCTCCACACAACTGTTGGCAATCACAAACACTaGTCCACTTGGGAGTTTTACATCGGTTGCCCTCAG +
Preference number: 3 (lower is better)
Translates to: IHLHTTVGNHKH*STWEFYIGCPQ
Trigger: CTGAGGGCAACCGATGTAAAACTCCCAAGTGGAGCAGTGTTTGTGATTGCCAACAGTTGTGTGGAGATGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559423.5
ENST00000560119.5
3UTR GCA 72 bp AACAGCATTTCTTCTAGACTAATCCCTAGTTTAGCCTaGACCTCCTCCAGCCTCAGTACTTTGTCCCATTGC +
Preference number: 3 (lower is better)
Translates to: NSISSRLIPSLA*TSSSLSTLSHC
Trigger: GCAATGGGACAAAGTACTGAGGCTGGAGGAGGTGCAGGCTAAACTAGGGATTAGTCTAGAAGAAATGCTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560119.5
3UTR CCA 72 bp CACACAACTGTTGGCAATCACAAACACTGCTCCACTTaGGAGTTTTACATCGGTTGCCCTCAGAGGACTAAA +
Preference number: 3 (lower is better)
Translates to: HTTVGNHKHCST*EFYIGCPQRTK
Trigger: TTTAGTCCTCTGAGGGCAACCGATGTAAAACTCCCAAGTGGAGCAGTGTTTGTGATTGCCAACAGTTGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559423.5
ENST00000560119.5
3UTR CCA 72 bp TCTGGTAATAAGCTTTGTGCACATTTGCTAGAAAGCTaGGCAGCTTGTCCGCAGGTACCATTGATACTGTGC +
Preference number: 3 (lower is better)
Translates to: SGNKLCAHLLES*AACPQVPLILC
Trigger: GCACAGTATCAATGGTACCTGCGGACAAGCTGCCCAGCTTTCTAGCAAATGTGCACAAAGCTTATTACCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560119.5
3UTR-3UTR CAA 90 bp TTTCAGCATGTCAAGGCTTCCATTCAAAAATCTAGAGCAATCCCATTGGCTGCTTGGCTCACTGTAGCTTaGAAGTCCTCAGCTCAAGTG +
Preference number: 3 (lower is better)
Translates to: FQHVKASIQKSRAIPLAAWLTVA*KSSAQV
Trigger: CACTTGAGCTGAGGACTTCAAAGCTACAGTGAGCCA...AGCAGCCAATGGGATTGCTCTAGATTTTTGAATGGAAGCCTTGACATGCTGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
3UTR-3UTR CAA 90 bp CAAGCAAAGGCTACCAAGAAACCTCATGAAGTGAAACAGGACTTTGAGAAGTTCCTGAATGCTGGACAATaGGAGGTCAGGGATAGAGGA +
Preference number: 3 (lower is better)
Translates to: QAKATKKPHEVKQDFEKFLNAGQ*EVRDRG
Trigger: TCCTCTATCCCTGACCTCCAATTGTCCAGCATTCAG...GAACTTCTCAAAGTCCTGTTTCACTTCATGAGGTTTCTTGGTAGCCTTTGCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
3UTR-3UTR CAA 90 bp ATTAGCACTAGTACTGAAGTCCGGATACAAGGGATTTGTATTGGCCAGTTGGAGTGCTCTCCTATTATGTaGACTCTTCCTGGTGCTCGA +
Preference number: 3 (lower is better)
Translates to: ISTSTEVRIQGICIGQLECSPIM*TLPGAR
Trigger: TCGAGCACCAGGAAGAGTCAACATAATAGGAGAGCA...CTCCAACTGGCCAATACAAATCCCTTGTATCCGGACTTCAGTACTAGTGCTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559883.5
ENST00000559963.5
3UTR-3UTR CAA 90 bp CAACTGTTGGCAATCACAAACACTGCTCCACTTGGGAGTTTTACATCGGTTGCCTTGTGCCACAAAGGCTaGGTTTTATCAATCTGGATG +
Preference number: 3 (lower is better)
Translates to: QLLAITNTAPLGSFTSVALCHKG*VLSIWM
Trigger: CATCCAGATTGATAAAACCAAGCCTTTGTGGCACAA...GGCAACCGATGTAAAACTCCCAAGTGGAGCAGTGTTTGTGATTGCCAACAGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559423.5
ENST00000560119.5
3UTR-3UTR CAA 90 bp CGGATACAAGGGATTTGTATTGGCCAGTTGGAGAGCGTACGTTTTCACAGGTTCTTGTGCCACAAAGGCTaGGTTTTATCAATCTGGATG +
Preference number: 3 (lower is better)
Translates to: RIQGICIGQLESVRFHRFLCHKG*VLSIWM
Trigger: CATCCAGATTGATAAAACCAAGCCTTTGTGGCACAA...GAACCTGTGAAAACGTACGCTCTCCAACTGGCCAATACAAATCCCTTGTATCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000558775.5
ENST00000559883.5
ENST00000559963.5
3UTR-3UTR CAA 90 bp TTGAAATGGGAAGTTGCTGCCTTATTCATCTCCACACAACTGTTGGCAATCACATCTGCAAGTTCCACCTaGGATAGATTCCTTCCCAGC +
Preference number: 3 (lower is better)
Translates to: LKWEVAALFISTQLLAITSASST*DRFLPS
Trigger: GCTGGGAAGGAATCTATCCAAGGTGGAACTTGCAGA...TGTGATTGCCAACAGTTGTGTGGAGATGAATAAGGCAGCAACTTCCCATTTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559423.5
ENST00000560119.5
3UTR-3UTR CAA 90 bp TCCATCTACCAGGCAGTTCATTCCAGTCAGGTTACTAAGACCAAAGTGTTCCTGATTTGTATTGGCCAGTaGGAGAGCGTACGTTTTCAC +
Preference number: 3 (lower is better)
Translates to: SIYQAVHSSQVTKTKVFLICIGQ*ESVRFH
Trigger: GTGAAAACGTACGCTCTCCAACTGGCCAATACAAAT...CAGGAACACTTTGGTCTTAGTAACCTGACTGGAATGAACTGCCTGGTAGATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558775.5
ENST00000559883.5
ENST00000559963.5
3UTR-3UTR CAA 90 bp ACTTGGTGGGATATTTCCATCTACCAGGCAGTTCATTCCAGTCAGGTTACTAAGTACAAGGGATTTGTATaGGCCAGTTGGAGAGCGTAC +
Preference number: 3 (lower is better)
Translates to: TWWDISIYQAVHSSQVTKYKGFV*ASWRAY
Trigger: GTACGCTCTCCAACTGGCCAATACAAATCCCTTGTA...CTTAGTAACCTGACTGGAATGAACTGCCTGGTAGATGGAAATATCCCACCAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000558775.5
ENST00000559883.5
ENST00000559963.5
3UTR TCA 72 bp TTCTATCAACTTGGCAGTTCCTTCTTCTGCAAGAAATaGTATAGACTGGTCCATGCCTCCTCCTTCAGTGCC +
Preference number: 3 (lower is better)
Translates to: FYQLGSSFFCKK*YRLVHASSFSA
Trigger: GGCACTGAAGGAGGAGGCATGGACCAGTCTATATCATTTCTTGCAGAAGAAGGAACTGCCAAGTTGATAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559423.5
ENST00000560119.5
3UTR GCA 72 bp CACAAACACTGCTCCACTTGGGAGTTTTACATCGGTTaGCCTCAGAGGACTAAATTCTATCAACTTGGCAGT +
Preference number: 3 (lower is better)
Translates to: HKHCSTWEFYIG*PQRTKFYQLGS
Trigger: ACTGCCAAGTTGATAGAATTTAGTCCTCTGAGGGCAACCGATGTAAAACTCCCAAGTGGAGCAGTGTTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559423.5
ENST00000560119.5
3UTR GCA 72 bp CCGACACTCCATCACCCTGATATTGAAATGGGAAGTTaGTGCCTTATTCATCTCCACACAACTGTTGGCAAT +
Preference number: 3 (lower is better)
Translates to: PTLHHPDIEMGS*CLIHLHTTVGN
Trigger: ATTGCCAACAGTTGTGTGGAGATGAATAAGGCAGCAACTTCCCATTTCAATATCAGGGTGATGGAGTGTCGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559423.5
ENST00000560119.5
3UTR CCA 72 bp GGGAAGTTGCTGCCTTATTCATCTCCACACAACTGTTaGCAATCACAAACACTGCTCCACTTGGGAGTTTTA +
Preference number: 3 (lower is better)
Translates to: GKLLPYSSPHNC*QSQTLLHLGVL
Trigger: TAAAACTCCCAAGTGGAGCAGTGTTTGTGATTGCCAACAGTTGTGTGGAGATGAATAAGGCAGCAACTTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559423.5
ENST00000560119.5
3UTR CCA 72 bp CTGAAGTCCGGATACAAGGGATTTGTATTGGCCAGTTaGAGAGCGTACGTTTTCACAGGTTCTACAGCTATT +
Preference number: 3 (lower is better)
Translates to: LKSGYKGFVLAS*RAYVFTGSTAI
Trigger: AATAGCTGTAGAACCTGTGAAAACGTACGCTCTCCAACTGGCCAATACAAATCCCTTGTATCCGGACTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558775.5
ENST00000559883.5
ENST00000559963.5
3UTR CCA 72 bp ATGTTTTCAGGTGCTTCTTCACATATCTTCTTAAACTaGAGCACTCGCGCAGCCTCGCTGTACACATGCTTT +
Preference number: 3 (lower is better)
Translates to: MFSGASSHIFLN*STRAASLYTCF
Trigger: AAAGCATGTGTACAGCGAGGCTGCGCGAGTGCTCCAGTTTAAGAAGATATGTGAAGAAGCACCTGAAAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560119.5
3UTR-3UTR CAA 90 bp TGCCAATGTAACGCTCACTCTTGGCACAGATTTCTGCAAGTTCCACCTTGGATATTGTGCCACAAAGGCTaGGTTTTATCAATCTGGATG +
Preference number: 3 (lower is better)
Translates to: CQCNAHSWHRFLQVPPWILCHKG*VLSIWM
Trigger: CATCCAGATTGATAAAACCAAGCCTTTGTGGCACAA...TATCCAAGGTGGAACTTGCAGAAATCTGTGCCAAGAGTGAGCGTTACATTGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000559208.5
ENST00000559423.5
ENST00000559883.5
ENST00000560119.5
3UTR GCA 72 bp ACACTCCATCACCCTGATATTGAAATGGGAAGTTGCTaGCTTATTCATCTCCACACAACTGTTGGCAATCAC +
Preference number: 3 (lower is better)
Translates to: TLHHPDIEMGSC*LIHLHTTVGNH
Trigger: GTGATTGCCAACAGTTGTGTGGAGATGAATAAGGCAGCAACTTCCCATTTCAATATCAGGGTGATGGAGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559423.5
ENST00000560119.5
3UTR CCA 72 bp TCTCCTGATTTGGAGCCCAAGTTTTTAGTCATTCTGTaGGCCAAACTATATACATCTGCAGACCAGATGTGG +
Preference number: 3 (lower is better)
Translates to: SPDLEPKFLVIL*AKLYTSADQMW
Trigger: CCACATCTGGTCTGCAGATGTATATAGTTTGGCCCACAGAATGACTAAAAACTTGGGCTCCAAATCAGGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
3UTR-3UTR CAA 90 bp GGACAATATTTCATAAGCAATGTATGGTGGCACACCCAAATTACAGTGGCAGGAGAAATAAAACTAGCTTaGCGCAGGCCTCCCTTAAAC +
Preference number: 3 (lower is better)
Translates to: GQYFISNVWWHTQITVAGEIKLA*RRPPLN
Trigger: GTTTAAGGGAGGCCTGCGCAAAGCTAGTTTTATTTC...TCCTGCCACTGTAATTTGGGTGTGCCACCATACATTGCTTATGAAATATTGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
3UTR-3UTR CAA 90 bp TTTCAGCATGTCAAGGCTTCCATTCAAAAATCTAGAGCAATCCCATTGGCTGCTCTACACACACCATGTTaGCCTATACCCATAGGCTTT +
Preference number: 3 (lower is better)
Translates to: FQHVKASIQKSRAIPLAALHTPC*PIPIGF
Trigger: AAAGCCTATGGGTATAGGCAAACATGGTGTGTGTAG...AGCAGCCAATGGGATTGCTCTAGATTTTTGAATGGAAGCCTTGACATGCTGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
3UTR-3UTR CAA 90 bp TTTCATAAGCAATGTATGGTGGCACACCCAAATTACAGTGGCAGGAGAGGATACTCTAGAGCAATCCCATaGGCTGCTAGTATAATGTCA +
Preference number: 3 (lower is better)
Translates to: FHKQCMVAHPNYSGRRGYSRAIP*AASIMS
Trigger: TGACATTATACTAGCAGCCAATGGGATTGCTCTAGA...GTATCCTCTCCTGCCACTGTAATTTGGGTGTGCCACCATACATTGCTTATGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
3UTR-3UTR CAA 90 bp GCCAGAACTTGGTGGGATATTTCCATCTACCAGGCAGTTCATTCCAGTCAGGTTGGAATAGATCCAAACTaGGAGTTAAACATCTCCTTT +
Preference number: 3 (lower is better)
Translates to: ARTWWDISIYQAVHSSQVGIDPN*ELNISF
Trigger: AAAGGAGATGTTTAACTCCAAGTTTGGATCTATTCC...AACCTGACTGGAATGAACTGCCTGGTAGATGGAAATATCCCACCAAGTTCTGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000558775.5
ENST00000559883.5
ENST00000559963.5
3UTR-3UTR CAA 90 bp GGGATATTTCCATCTACCAGGCAGTTCATTCCAGTCAGGTTACTAAGACCAAAGTTGTGCCACAAAGGCTaGGTTTTATCAATCTGGATG +
Preference number: 3 (lower is better)
Translates to: GIFPSTRQFIPVRLLRPKLCHKG*VLSIWM
Trigger: CATCCAGATTGATAAAACCAAGCCTTTGTGGCACAA...CTTTGGTCTTAGTAACCTGACTGGAATGAACTGCCTGGTAGATGGAAATATCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558775.5
ENST00000559208.5
ENST00000559423.5
ENST00000559883.5
ENST00000559963.5
ENST00000560119.5
3UTR TCA 72 bp AGACAAGAACATGTAGAGACTAGTGTACAATATGTCTaGATGCTGGACAATTGGAGGTCAGGGATAGAGGAG +
Preference number: 3 (lower is better)
Translates to: RQEHVETSVQYV*MLDNWRSGIEE
Trigger: CTCCTCTATCCCTGACCTCCAATTGTCCAGCATTCAGACATATTGTACACTAGTCTCTACATGTTCTTGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
3UTR TCA 72 bp GACTCCAAGCAAAGGCTACCAAGAAACCTCATGAAGTaGAACAGGACTTTGAGAAGTTCCTACATAAACTGG +
Preference number: 3 (lower is better)
Translates to: DSKQRLPRNLMK*NRTLRSSYINW
Trigger: CCAGTTTATGTAGGAACTTCTCAAAGTCCTGTTTCACTTCATGAGGTTTCTTGGTAGCCTTTGCTTGGAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
3UTR-3UTR CAA 90 bp TATGGTGGCACACCCAAATTACAGTGGCAGGAGAGGATACATTCTTGTTACTTAAAATGCTGCCTGGATTaGACTCTTCAAAAGCTAGCT +
Preference number: 3 (lower is better)
Translates to: YGGTPKLQWQERIHSCYLKCCLD*TLQKLA
Trigger: AGCTAGCTTTTGAAGAGTCAAATCCAGGCAGCATTT...TAAGTAACAAGAATGTATCCTCTCCTGCCACTGTAATTTGGGTGTGCCACCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
3UTR-3UTR CAA 90 bp GGACAATATTTCATAAGCAATGTATGGTGGCACACCCAAATTACAGTGGCAGGATCTAGAGCAATCCCATaGGCTGCTAGTATAATGTCA +
Preference number: 3 (lower is better)
Translates to: GQYFISNVWWHTQITVAGSRAIP*AASIMS
Trigger: TGACATTATACTAGCAGCCAATGGGATTGCTCTAGA...TCCTGCCACTGTAATTTGGGTGTGCCACCATACATTGCTTATGAAATATTGTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
3UTR-3UTR CAA 90 bp GGACAATATTTCATAAGCAATGTATGGTGGCACACCCAAATTACAGTGGCAGGATACTTATGGGCATTCTaGTTAAGTCTGAAGGGCTTC +
Preference number: 3 (lower is better)
Translates to: GQYFISNVWWHTQITVAGYLWAF*LSLKGF
Trigger: GAAGCCCTTCAGACTTAACAAGAATGCCCATAAGTA...TCCTGCCACTGTAATTTGGGTGTGCCACCATACATTGCTTATGAAATATTGTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
3UTR-3UTR CAA 90 bp GCCAGTTGGAGAGCGTACGTTTTCACAGGTTCTACAGCTATTAGCACATCTTGTGGAATAGATCCAAACTaGGAGTTAAACATCTCCTTT +
Preference number: 3 (lower is better)
Translates to: ASWRAYVFTGSTAISTSCGIDPN*ELNISF
Trigger: AAAGGAGATGTTTAACTCCAAGTTTGGATCTATTCC...ACAAGATGTGCTAATAGCTGTAGAACCTGTGAAAACGTACGCTCTCCAACTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558775.5
ENST00000559883.5
ENST00000559963.5
ENST00000561074.5
3UTR-3UTR CAA 90 bp AGGCTTGGTTTTATCAATCTGGATGTTATTAGCACTAGTACTGAAGTCCGGATATGCTCTCCTATTATGTaGACTCTTCCTGGTGCTCGA +
Preference number: 3 (lower is better)
Translates to: RLGFINLDVISTSTEVRICSPIM*TLPGAR
Trigger: TCGAGCACCAGGAAGAGTCAACATAATAGGAGAGCA...TATCCGGACTTCAGTACTAGTGCTAATAACATCCAGATTGATAAAACCAAGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559883.5
ENST00000559963.5
3UTR-3UTR CAA 90 bp ATCTACCAGGCAGTTCATTCCAGTCAGGTTACTAAGACCAAAGTGTTCCTGAATTTGTGCCACAAAGGCTaGGTTTTATCAATCTGGATG +
Preference number: 3 (lower is better)
Translates to: IYQAVHSSQVTKTKVFLNLCHKG*VLSIWM
Trigger: CATCCAGATTGATAAAACCAAGCCTTTGTGGCACAA...ATTCAGGAACACTTTGGTCTTAGTAACCTGACTGGAATGAACTGCCTGGTAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000558775.5
ENST00000558956.5
ENST00000559208.5
ENST00000559423.5
ENST00000559883.5
ENST00000559963.5
ENST00000560119.5
3UTR-3UTR CAA 90 bp CTTGGTTTTATCAATCTGGATGTTATTAGCACTAGTACTGAAGTCCGGATACAACCGGATACAAGGGATTaGTATTGGCCAGTTGGAGAG +
Preference number: 3 (lower is better)
Translates to: LGFINLDVISTSTEVRIQPDTRD*YWPVGE
Trigger: CTCTCCAACTGGCCAATACAAATCCCTTGTATCCGG...TTGTATCCGGACTTCAGTACTAGTGCTAATAACATCCAGATTGATAAAACCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558775.5
ENST00000559883.5
ENST00000559963.5
3UTR GCA 72 bp AGAAGGAAGATTAATTTACTGTGGCACAGAAAGTCCTaGCAATTCCTAAGTGCCCTAAGTAGTTTCTCTCAG +
Preference number: 3 (lower is better)
Translates to: RRKINLLWHRKS*QFLSALSSFSQ
Trigger: CTGAGAGAAACTACTTAGGGCACTTAGGAATTGGCAGGACTTTCTGTGCCACAGTAAATTAATCTTCCTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327171.7
ENST00000396509.6
ENST00000544523.5
ENST00000559454.5
ENST00000560031.6
ENST00000560119.5
3UTR GCA 72 bp TTTGCCTATACCCATAGGCTTTGCTCATCTGCAGTGTaGACTCCACAGCTTTTAAACTCTACTCATCTTTTA +
Preference number: 3 (lower is better)
Translates to: FAYTHRLCSSAV*TPQLLNSTHLL
Trigger: TAAAAGATGAGTAGAGTTTAAAAGCTGTGGAGTGCACACTGCAGATGAGCAAAGCCTATGGGTATAGGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
3UTR-3UTR CAA 90 bp GGACAATATTTCATAAGCAATGTATGGTGGCACACCCAAATTACAGTGGCAGGAAATGTGTGGAATTTCTaGGAAGTGCCTCTTGGATTA +
Preference number: 3 (lower is better)
Translates to: GQYFISNVWWHTQITVAGNVWNF*EVPLGL
Trigger: TAATCCAAGAGGCACTTCCAAGAAATTCCACACATT...TCCTGCCACTGTAATTTGGGTGTGCCACCATACATTGCTTATGAAATATTGTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
3UTR-3UTR CAA 90 bp TATGGTGGCACACCCAAATTACAGTGGCAGGAGAGGATACATTCTTGTTACTTACATTTCTGCCCACTCTaGATATACATACAGAGATAC +
Preference number: 3 (lower is better)
Translates to: YGGTPKLQWQERIHSCYLHFCPL*IYIQRY
Trigger: GTATCTCTGTATGTATATCAAGAGTGGGCAGAAATG...TAAGTAACAAGAATGTATCCTCTCCTGCCACTGTAATTTGGGTGTGCCACCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
3UTR-3UTR CAA 90 bp TATGGTGGCACACCCAAATTACAGTGGCAGGAGAGGATACATTCTTGTTACTTACATGCCATAAAACCATaGCTATCTCAATTACCTGAG +
Preference number: 3 (lower is better)
Translates to: YGGTPKLQWQERIHSCYLHAIKP*LSQLPE
Trigger: CTCAGGTAATTGAGATAGCAATGGTTTTATGGCATG...TAAGTAACAAGAATGTATCCTCTCCTGCCACTGTAATTTGGGTGTGCCACCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
3UTR-3UTR CAA 90 bp GCAGGAGAGGATACATTCTTGTTACTTAATCATCTACATGCACATGTAAGAAAACTGAATGCTGGACAATaGGAGGTCAGGGATAGAGGA +
Preference number: 3 (lower is better)
Translates to: AGEDTFLLLNHLHAHVRKLNAGQ*EVRDRG
Trigger: TCCTCTATCCCTGACCTCCAATTGTCCAGCATTCAG...TTTTCTTACATGTGCATGTAGATGATTAAGTAACAAGAATGTATCCTCTCCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
3UTR-3UTR CAA 90 bp TTTCAGCATGTCAAGGCTTCCATTCAAAAATCTAGAGCAATCCCATTGGCTGCTCAGACAACTACAACTTaGAGGAAGAAGAATACTAAG +
Preference number: 3 (lower is better)
Translates to: FQHVKASIQKSRAIPLAAQTTTT*RKKNTK
Trigger: CTTAGTATTCTTCTTCCTCAAAGTTGTAGTTGTCTG...AGCAGCCAATGGGATTGCTCTAGATTTTTGAATGGAAGCCTTGACATGCTGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
3UTR-3UTR CAA 90 bp CACATACCTGCATACCTGCTTTACAATGGGGTGCATATATACAAACAAGCTTTGAATGTGTGGAATTTCTaGGAAGTGCCTCTTGGATTA +
Preference number: 3 (lower is better)
Translates to: HIPAYLLYNGVHIYKQALNVWNF*EVPLGL
Trigger: TAATCCAAGAGGCACTTCCAAGAAATTCCACACATT...CAAAGCTTGTTTGTATATATGCACCCCATTGTAAAGCAGGTATGCAGGTATGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
3UTR-3UTR CAA 90 bp ATTTCCATCTACCAGGCAGTTCATTCCAGTCAGGTTACTAAGACCAAAGTGTTCGGAATAGATCCAAACTaGGAGTTAAACATCTCCTTT +
Preference number: 3 (lower is better)
Translates to: ISIYQAVHSSQVTKTKVFGIDPN*ELNISF
Trigger: AAAGGAGATGTTTAACTCCAAGTTTGGATCTATTCC...GAACACTTTGGTCTTAGTAACCTGACTGGAATGAACTGCCTGGTAGATGGAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000558775.5
ENST00000559883.5
ENST00000559963.5
3UTR TCA 72 bp ATTTGCCATCACCAGCCAAACATTTCTGCCCACTCTTaGTATACATACAGAGATACCCATCAATACCATTAC +
Preference number: 3 (lower is better)
Translates to: ICHHQPNISAHS*YTYRDTHQYHY
Trigger: GTAATGGTATTGATGGGTATCTCTGTATGTATATCAAGAGTGGGCAGAAATGTTTGGCTGGTGATGGCAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
3UTR TCA 72 bp AACAAAATCATATTGGGTACCAACAGCTGTGTTAGATaGATGGTCCCTGCCCTCAATTATCAAGGCAGAATA +
Preference number: 3 (lower is better)
Translates to: NKIILGTNSCVR*MVPALNYQGRI
Trigger: TATTCTGCCTTGATAATTGAGGGCAGGGACCATTCATCTAACACAGCTGTTGGTACCCAATATGATTTTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
3UTR CCA 72 bp AAATCATATTGGGTACCAACAGCTGTGTTAGATGAATaGTCCCTGCCCTCAATTATCAAGGCAGAATATGAT +
Preference number: 3 (lower is better)
Translates to: KSYWVPTAVLDE*SLPSIIKAEYD
Trigger: ATCATATTCTGCCTTGATAATTGAGGGCAGGGACCATTCATCTAACACAGCTGTTGGTACCCAATATGATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
3UTR-3UTR CAA 90 bp GCAGGAGAGGATACATTCTTGTTACTTAATCATCTACATGCACATGTAAGAAAACCAACCACAAATCCTTaGTGGAAAATGGCACGGTAT +
Preference number: 3 (lower is better)
Translates to: AGEDTFLLLNHLHAHVRKPTTNP*WKMARY
Trigger: ATACCGTGCCATTTTCCACAAAGGATTTGTGGTTGG...TTTTCTTACATGTGCATGTAGATGATTAAGTAACAAGAATGTATCCTCTCCTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
3UTR-3UTR CAA 90 bp ATGCCCTGTAGAAATGTTGGACAAGTAGTATCAGATATTCCACCACTCAGTAATCAGACAACTACAACTTaGAGGAAGAAGAATACTAAG +
Preference number: 3 (lower is better)
Translates to: MPCRNVGQVVSDIPPLSNQTTTT*RKKNTK
Trigger: CTTAGTATTCTTCTTCCTCAAAGTTGTAGTTGTCTG...ATTACTGAGTGGTGGAATATCTGATACTACTTGTCCAACATTTCTACAGGGCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
3UTR-3UTR CAA 90 bp TCAATCTGGATGTTATTAGCACTAGTACTGAAGTCCGGATACAAGGGATTTGTAGGAATAGATCCAAACTaGGAGTTAAACATCTCCTTT +
Preference number: 3 (lower is better)
Translates to: SIWMLLALVLKSGYKGFVGIDPN*ELNISF
Trigger: AAAGGAGATGTTTAACTCCAAGTTTGGATCTATTCC...TACAAATCCCTTGTATCCGGACTTCAGTACTAGTGCTAATAACATCCAGATTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000558775.5
ENST00000559883.5
ENST00000559963.5
CDS-3UTR TCA 90 bp TGTGGGCCAAACTATATACATCTGCAGACCAGATGTGGCCCATGGGCTGCTGGGCCTGCCTCAGCCTCCTaGGTAGCTGGGACAGCAGGC +
Preference number: 4 (lower is better)
Translates to: CGPNYIHLQTRCGPWAAGPASAS*VAGTAG
Trigger: GCCTGCTGTCCCAGCTACTCAGGAGGCTGAGGCAGG...CCCAGCAGCCCATGGGCCACATCTGGTCTGCAGATGTATATAGTTTGGCCCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR TCA 90 bp GGCCAGAACTTGGTGGGATATTTCCATCTACCAGGCAGTTCATTCCAGTCAGGTCCGACGCCCTTCGGCTaGGACCTGCAGCACCGGACG +
Preference number: 4 (lower is better)
Translates to: GQNLVGYFHLPGSSFQSGPTPFG*DLQHRT
Trigger: CGTCCGGTGCTGCAGGTCTCAGCCGAAGGGCGTCGG...ACCTGACTGGAATGAACTGCCTGGTAGATGGAAATATCCCACCAAGTTCTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000558775.5
ENST00000559883.5
ENST00000559963.5
CDS-3UTR TCA 90 bp TGTGGGCCAAACTATATACATCTGCAGACCAGATGTGGCCCATGGGCTGCTGGGCAGATGTCCACCAGCTaGTCCAGCTCGGGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: CGPNYIHLQTRCGPWAAGQMSTS*SSSGQL
Trigger: CAGCTGCCCCGAGCTGGATCAGCTGGTGGACATCTG...CCCAGCAGCCCATGGGCCACATCTGGTCTGCAGATGTATATAGTTTGGCCCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR GCA 90 bp AGTACTGAAGTCCCTCCTGCTGTGTGGCCCACTTCTGAACAGGCCATGAAGCAGTGCCTGAGGGAGCCCTaGAGCCCGGAAGACGGATAC +
Preference number: 4 (lower is better)
Translates to: STEVPPAVWPTSEQAMKQCLREP*SPEDGY
Trigger: GTATCCGTCTTCCGGGCTGCAGGGCTCCCTCAGGCA...CTGCTTCATGGCCTGTTCAGAAGTGGGCCACACAGCAGGAGGGACTTCAGTACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000558956.5
ENST00000559208.5
ENST00000559423.5
CDS-3UTR TCA 90 bp GGCCAGAACTTGGTGGGATATTTCCATCTACCAGGCAGTTCATTCCAGTCAGGTGTCATAGCCTCTGCCTaGGGGAGCCCTGCAGCCCGG +
Preference number: 4 (lower is better)
Translates to: GQNLVGYFHLPGSSFQSGVIASA*GSPAAR
Trigger: CCGGGCTGCAGGGCTCCCTCAGGCAGAGGCTATGAC...ACCTGACTGGAATGAACTGCCTGGTAGATGGAAATATCCCACCAAGTTCTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559208.5
ENST00000559423.5
CDS-3UTR GCA 90 bp TGTGGGCCAAACTATATACATCTGCAGACCAGATGTGGCCCATGGGCTGCTGGGGGGACAGCAGGCACATaGCACCACTCCCAGCTAAGG +
Preference number: 4 (lower is better)
Translates to: CGPNYIHLQTRCGPWAAGGTAGT*HHSQLR
Trigger: CCTTAGCTGGGAGTGGTGGCATGTGCCTGCTGTCCC...CCCAGCAGCCCATGGGCCACATCTGGTCTGCAGATGTATATAGTTTGGCCCACA
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR TCA 90 bp TGGTGGGATATTTCCATCTACCAGGCAGTTCATTCCAGTCAGGTTACTAAGACCCCGACGCCCTTCGGCTaGGACCTGCAGCACCGGACG +
Preference number: 4 (lower is better)
Translates to: WWDISIYQAVHSSQVTKTPTPFG*DLQHRT
Trigger: CGTCCGGTGCTGCAGGTCTCAGCCGAAGGGCGTCGG...GGTCTTAGTAACCTGACTGGAATGAACTGCCTGGTAGATGGAAATATCCCACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558775.5
ENST00000559883.5
ENST00000559963.5
CDS-3UTR TCA 90 bp GGATACAAGGGATTTGTATTGGCCAGTTGGAGAGCGTACGTTTTCACAGGTTCTCCGACGCCCTTCGGCTaGGACCTGCAGCACCGGACG +
Preference number: 4 (lower is better)
Translates to: GYKGFVLASWRAYVFTGSPTPFG*DLQHRT
Trigger: CGTCCGGTGCTGCAGGTCTCAGCCGAAGGGCGTCGG...AGAACCTGTGAAAACGTACGCTCTCCAACTGGCCAATACAAATCCCTTGTATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558775.5
ENST00000559883.5
ENST00000559963.5
CDS-3UTR TCA 90 bp GGAGCTGGAGAGGCCAGAACTTGGTGGGATATTTCCATCTACCAGGCAGTTCATCAGATGTCCACCAGCTaGTCCAGCTCGGGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: GAGEARTWWDISIYQAVHQMSTS*SSSGQL
Trigger: CAGCTGCCCCGAGCTGGATCAGCTGGTGGACATCTG...ATGAACTGCCTGGTAGATGGAAATATCCCACCAAGTTCTGGCCTCTCCAGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560119.5
CDS-3UTR TCA 90 bp TCAATCTGGATGTTATTAGCACTAGTACTGAAGTCCCTCCTGCTGTGTGGCCCAGTCATAGCCTCTGCCTaGGGGAGCCCTGCAGCCCGG +
Preference number: 4 (lower is better)
Translates to: SIWMLLALVLKSLLLCGPVIASA*GSPAAR
Trigger: CCGGGCTGCAGGGCTCCCTCAGGCAGAGGCTATGAC...TGGGCCACACAGCAGGAGGGACTTCAGTACTAGTGCTAATAACATCCAGATTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558956.5
ENST00000559208.5
ENST00000559423.5
CDS-3UTR TCA 90 bp AGACTGGTCCATGCCTCCTCCTTCAGTGCCAATGTAACGCTCACTCTTGGCACAGAGGTTGCAGTGAGCTaGGATCACGCCGTTGCACTC +
Preference number: 4 (lower is better)
Translates to: RLVHASSFSANVTLTLGTEVAVS*DHAVAL
Trigger: GAGTGCAACGGCGTGATCTCAGCTCACTGCAACCTC...TGTGCCAAGAGTGAGCGTTACATTGGCACTGAAGGAGGAGGCATGGACCAGTCT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560119.5
CDS-3UTR TCA 90 bp TGGTGGGATATTTCCATCTACCAGGCAGTTCATTCCAGTCAGGTTACTAAGACCGTCATAGCCTCTGCCTaGGGGAGCCCTGCAGCCCGG +
Preference number: 4 (lower is better)
Translates to: WWDISIYQAVHSSQVTKTVIASA*GSPAAR
Trigger: CCGGGCTGCAGGGCTCCCTCAGGCAGAGGCTATGAC...GGTCTTAGTAACCTGACTGGAATGAACTGCCTGGTAGATGGAAATATCCCACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559208.5
ENST00000559423.5
CDS-3UTR CCA 90 bp CAGATTTCTGCAAGTTCCACCTTGGATAGATTCCTTCCCAGCACTGTGAGCGTCGGATGTTCTGCCACCTaGACCCGACGCGTAGCAGGG +
Preference number: 4 (lower is better)
Translates to: QISASSTLDRFLPSTVSVGCSAT*TRRVAG
Trigger: CCCTGCTACGCGTCGGGTCCAGGTGGCAGAACATCC...GACGCTCACAGTGCTGGGAAGGAATCTATCCAAGGTGGAACTTGCAGAAATCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559208.5
CDS-3UTR TCA 90 bp GGCCAGAACTTGGTGGGATATTTCCATCTACCAGGCAGTTCATTCCAGTCAGGTTCCTTCCCAGCACTGTaGGCGTCACCAAGCCAGCAC +
Preference number: 4 (lower is better)
Translates to: GQNLVGYFHLPGSSFQSGSFPAL*ASPSQH
Trigger: GTGCTGGCTTGGTGACGCTCACAGTGCTGGGAAGGA...ACCTGACTGGAATGAACTGCCTGGTAGATGGAAATATCCCACCAAGTTCTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000559208.5
ENST00000559423.5
ENST00000559883.5
ENST00000560119.5
CDS-3UTR TCA 90 bp TGTGGGCCAAACTATATACATCTGCAGACCAGATGTGGCCCATGGGCTGCTGGGTGCTCCAGTAAGTCGTaGCCCTTGAGCCCCAAACTT +
Preference number: 4 (lower is better)
Translates to: CGPNYIHLQTRCGPWAAGCSSKS*PLSPKL
Trigger: AAGTTTGGGGCTCAAGGGTCACGACTTACTGGAGCA...CCCAGCAGCCCATGGGCCACATCTGGTCTGCAGATGTATATAGTTTGGCCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR TCA 90 bp GTCCATGCCTCCTCCTTCAGTGCCAATGTAACGCTCACTCTTGGCACAGATTTCAGGCAGAGGTTGCAGTaGGCTGAGATCACGCCGTTG +
Preference number: 4 (lower is better)
Translates to: VHASSFSANVTLTLGTDFRQRLQ*AEITPL
Trigger: CAACGGCGTGATCTCAGCTCACTGCAACCTCTGCCT...GAAATCTGTGCCAAGAGTGAGCGTTACATTGGCACTGAAGGAGGAGGCATGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560119.5
CDS-3UTR GCA 90 bp TCCTTCAGTGCCAATGTAACGCTCACTCTTGGCACAGATTTCTGCAAGTTCCACCCTTCGGCTGAGACCTaGAGCACCGGACGATGTCCC +
Preference number: 4 (lower is better)
Translates to: SFSANVTLTLGTDFCKFHPSAET*STGRCP
Trigger: GGGACATCGTCCGGTGCTGCAGGTCTCAGCCGAAGG...GTGGAACTTGCAGAAATCTGTGCCAAGAGTGAGCGTTACATTGGCACTGAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559883.5
CDS-3UTR GCA 90 bp TCCTTCAGTGCCAATGTAACGCTCACTCTTGGCACAGATTTCTGCAAGTTCCACGCAGGTCATAGCCTCTaGCTGAGGGAGCCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: SFSANVTLTLGTDFCKFHAGHSL*LREPCS
Trigger: GCTGCAGGGCTCCCTCAGGCAGAGGCTATGACCTGC...GTGGAACTTGCAGAAATCTGTGCCAAGAGTGAGCGTTACATTGGCACTGAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559208.5
ENST00000559423.5
CDS-3UTR CCA 90 bp AGTACTGAAGTCCCTCCTGCTGTGTGGCCCACTTCTGAACAGGCCATGAAGCAGAACAGACCAAAGCACTaGAGCTGGAGAGGCCAGAAC +
Preference number: 4 (lower is better)
Translates to: STEVPPAVWPTSEQAMKQNRPKH*SWRGQN
Trigger: GTTCTGGCCTCTCCAGCTCCAGTGCTTTGGTCTGTT...CTGCTTCATGGCCTGTTCAGAAGTGGGCCACACAGCAGGAGGGACTTCAGTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559208.5
ENST00000559423.5
CDS-3UTR TCA 90 bp CACATACCTGCATACCTGCTTTACAATGGGGTGCATATATACAAACAAGCTTTGCCGACGCCCTTCGGCTaGGACCTGCAGCACCGGACG +
Preference number: 4 (lower is better)
Translates to: HIPAYLLYNGVHIYKQALPTPFG*DLQHRT
Trigger: CGTCCGGTGCTGCAGGTCTCAGCCGAAGGGCGTCGG...CAAAGCTTGTTTGTATATATGCACCCCATTGTAAAGCAGGTATGCAGGTATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327171.7
CDS-3UTR TCA 90 bp CGGATACAAGGGATTTGTATTGGCCAGTTGGAGAGCGTACGTTTTCACAGGTTCTCCTTCCCAGCACTGTaGGCGTCACCAAGCCAGCAC +
Preference number: 4 (lower is better)
Translates to: RIQGICIGQLESVRFHRFSFPAL*ASPSQH
Trigger: GTGCTGGCTTGGTGACGCTCACAGTGCTGGGAAGGA...GAACCTGTGAAAACGTACGCTCTCCAACTGGCCAATACAAATCCCTTGTATCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559883.5
CDS-3UTR GCA 90 bp AAGTCCGGATACAAGGGATTTGTATTGGCCAGTTGGAGAGCGTACGTTTTCACACCTTCGGCTGAGACCTaGAGCACCGGACGATGTCCC +
Preference number: 4 (lower is better)
Translates to: KSGYKGFVLASWRAYVFTPSAET*STGRCP
Trigger: GGGACATCGTCCGGTGCTGCAGGTCTCAGCCGAAGG...TGTGAAAACGTACGCTCTCCAACTGGCCAATACAAATCCCTTGTATCCGGACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558775.5
ENST00000559883.5
ENST00000559963.5
CDS-3UTR GCA 90 bp GAGGCCAGAACTTGGTGGGATATTTCCATCTACCAGGCAGTTCATTCCAGTCAGCTGGAAACTGCTCGATaGGAGCGCAGTTTCCGACGC +
Preference number: 4 (lower is better)
Translates to: EARTWWDISIYQAVHSSQLETAR*ERSFRR
Trigger: GCGTCGGAAACTGCGCTCGCATCGAGCAGTTTCCAG...CTGACTGGAATGAACTGCCTGGTAGATGGAAATATCCCACCAAGTTCTGGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000558775.5
ENST00000559883.5
ENST00000559963.5
CDS-3UTR CCA 90 bp GTCCATGCCTCCTCCTTCAGTGCCAATGTAACGCTCACTCTTGGCACAGATTTCCTTTACCCAGGAGGCTaGAAACTGCTCGATGCGAGC +
Preference number: 4 (lower is better)
Translates to: VHASSFSANVTLTLGTDFLYPGG*KLLDAS
Trigger: GCTCGCATCGAGCAGTTTCCAGCCTCCTGGGTAAAG...GAAATCTGTGCCAAGAGTGAGCGTTACATTGGCACTGAAGGAGGAGGCATGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559883.5
CDS-3UTR CCA 90 bp CTGGTCCATGCCTCCTCCTTCAGTGCCAATGTAACGCTCACTCTTGGCACAGATAACAGACCAAAGCACTaGAGCTGGAGAGGCCAGAAC +
Preference number: 4 (lower is better)
Translates to: LVHASSFSANVTLTLGTDNRPKH*SWRGQN
Trigger: GTTCTGGCCTCTCCAGCTCCAGTGCTTTGGTCTGTT...ATCTGTGCCAAGAGTGAGCGTTACATTGGCACTGAAGGAGGAGGCATGGACCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000559208.5
ENST00000559423.5
ENST00000559883.5
ENST00000560119.5
CDS-3UTR CCA 90 bp TGTGGGCCAAACTATATACATCTGCAGACCAGATGTGGCCCATGGGCTGCTGGGCATTTGCTAGAAAGCTaGGCAGCTTGTCCGCAGGTA +
Preference number: 4 (lower is better)
Translates to: CGPNYIHLQTRCGPWAAGHLLES*AACPQV
Trigger: TACCTGCGGACAAGCTGCCCAGCTTTCTAGCAAATG...CCCAGCAGCCCATGGGCCACATCTGGTCTGCAGATGTATATAGTTTGGCCCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CCA 90 bp TGTGGGCCAAACTATATACATCTGCAGACCAGATGTGGCCCATGGGCTGCTGGGGCAGTGCTGCAGTCATaGCTCACTGTAGCTTTGAAG +
Preference number: 4 (lower is better)
Translates to: CGPNYIHLQTRCGPWAAGAVLQS*LTVALK
Trigger: CTTCAAAGCTACAGTGAGCCATGACTGCAGCACTGC...CCCAGCAGCCCATGGGCCACATCTGGTCTGCAGATGTATATAGTTTGGCCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CCA 90 bp TTAGCACTAGTACTGAAGTCCCTCCTGCTGTGTGGCCCACTTCTGAACAGGCCAAGCAGTAACAGGGATTaGGGAACCCTGCTCTACAGG +
Preference number: 4 (lower is better)
Translates to: LALVLKSLLLCGPLLNRPSSNRD*GTLLYR
Trigger: CCTGTAGAGCAGGGTTCCCCAATCCCTGTTACTGCT...TGGCCTGTTCAGAAGTGGGCCACACAGCAGGAGGGACTTCAGTACTAGTGCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000558956.5
ENST00000559208.5
ENST00000559423.5
CDS-3UTR CCA 90 bp TCAATCTGGATGTTATTAGCACTAGTACTGAAGTCCCTCCTGCTGTGTGGCCCAGTCCCTCCTGCTGTGTaGCCCACTTCTGAACAGGCC +
Preference number: 4 (lower is better)
Translates to: SIWMLLALVLKSLLLCGPVPPAV*PTSEQA
Trigger: GGCCTGTTCAGAAGTGGGCCACACAGCAGGAGGGAC...TGGGCCACACAGCAGGAGGGACTTCAGTACTAGTGCTAATAACATCCAGATTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000558956.5
ENST00000559208.5
ENST00000559423.5
3UTR CAA 72 bp TCCTCCAGCCTCAGTACTTTGTCCCATTGCAAGCTTTaGTATTTAGCCAGGAGCTTCGCAGCCAGCCGACAC +
Preference number: 4 (lower is better)
Translates to: SSSLSTLSHCKL*YLARSFAASRH
Trigger: GTGTCGGCTGGCTGCGAAGCTCCTGGCTAAATACAAAAGCTTGCAATGGGACAAAGTACTGAGGCTGGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560119.5
CDS-3UTR TCA 90 bp AGTACTGAAGTCCCTCCTGCTGTGTGGCCCACTTCTGAACAGGCCATGAAGCAGGCTCTCCTATTATGTTaGCTCTTCCTGGTGCTCGAA +
Preference number: 4 (lower is better)
Translates to: STEVPPAVWPTSEQAMKQALLLC*LFLVLE
Trigger: TTCGAGCACCAGGAAGAGTCAACATAATAGGAGAGC...CTGCTTCATGGCCTGTTCAGAAGTGGGCCACACAGCAGGAGGGACTTCAGTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000558956.5
ENST00000559208.5
ENST00000559423.5
CDS-3UTR TCA 90 bp ATTTCTGCAAGTTCCACCTTGGATAGATTCCTTCCCAGCACTGTGAGCGTCACCGTAAGTCGTGACCCTTaGGCCCCAAACTTCCGACAG +
Preference number: 4 (lower is better)
Translates to: ISASSTLDRFLPSTVSVTVSRDP*APNFRQ
Trigger: CTGTCGGAAGTTTGGGGCTCAAGGGTCACGACTTAC...GGTGACGCTCACAGTGCTGGGAAGGAATCTATCCAAGGTGGAACTTGCAGAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560119.5
CDS-3UTR TCA 90 bp GGACAATATTTCATAAGCAATGTATGGTGGCACACCCAAATTACAGTGGCAGGACCTGCCTCAGCCTCCTaGGTAGCTGGGACAGCAGGC +
Preference number: 4 (lower is better)
Translates to: GQYFISNVWWHTQITVAGPASAS*VAGTAG
Trigger: GCCTGCTGTCCCAGCTACTCAGGAGGCTGAGGCAGG...TCCTGCCACTGTAATTTGGGTGTGCCACCATACATTGCTTATGAAATATTGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR GCA 90 bp CCAGTTGGAGAGCGTACGTTTTCACAGGTTCTACAGCTATTAGCACATCTTGTTCCTTCGGCTGAGACCTaGAGCACCGGACGATGTCCC +
Preference number: 4 (lower is better)
Translates to: PVGERTFSQVLQLLAHLVPSAET*STGRCP
Trigger: GGGACATCGTCCGGTGCTGCAGGTCTCAGCCGAAGG...AACAAGATGTGCTAATAGCTGTAGAACCTGTGAAAACGTACGCTCTCCAACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558775.5
ENST00000559883.5
ENST00000559963.5
ENST00000561074.5
CDS-3UTR GCA 90 bp TCTGCAAGTTCCACCTTGGATAGATTCCTTCCCAGCACTGTGAGCGTCACCAAGGTACCATTGATACTGTaGAGCCTCCCCATCCTGCTC +
Preference number: 4 (lower is better)
Translates to: SASSTLDRFLPSTVSVTKVPLIL*SLPILL
Trigger: GAGCAGGATGGGGAGGCTGCACAGTATCAATGGTAC...CTTGGTGACGCTCACAGTGCTGGGAAGGAATCTATCCAAGGTGGAACTTGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560119.5
CDS-3UTR GCA 90 bp ACTTGGTGGGATATTTCCATCTACCAGGCAGTTCATTCCAGTCAGGTTACTAAGTGCCTGAGGGAGCCCTaGAGCCCGGAAGACGGATAC +
Preference number: 4 (lower is better)
Translates to: TWWDISIYQAVHSSQVTKCLREP*SPEDGY
Trigger: GTATCCGTCTTCCGGGCTGCAGGGCTCCCTCAGGCA...CTTAGTAACCTGACTGGAATGAACTGCCTGGTAGATGGAAATATCCCACCAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559208.5
ENST00000559423.5
CDS-3UTR CCA 90 bp AGTACTGAAGTCCCTCCTGCTGTGTGGCCCACTTCTGAACAGGCCATGAAGCAGACAAGGGATTTGTATTaGCCAGTTGGAGAGCGTACG +
Preference number: 4 (lower is better)
Translates to: STEVPPAVWPTSEQAMKQTRDLY*PVGERT
Trigger: CGTACGCTCTCCAACTGGCCAATACAAATCCCTTGT...CTGCTTCATGGCCTGTTCAGAAGTGGGCCACACAGCAGGAGGGACTTCAGTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000558956.5
ENST00000559208.5
ENST00000559423.5
CDS-3UTR CCA 90 bp TTGGGGAACCCTGCTCTACAGGACCAGTCCAAGAATGGTGTGGCCTATCTGCAGCTGCAAGTTCCACCTTaGATAGATTCCTTCCCAGCA +
Preference number: 4 (lower is better)
Translates to: LGNPALQDQSKNGVAYLQLQVPP*IDSFPA
Trigger: TGCTGGGAAGGAATCTATCCAAGGTGGAACTTGCAG...CTGCAGATAGGCCACACCATTCTTGGACTGGTCCTGTAGAGCAGGGTTCCCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559208.5
ENST00000559423.5
CDS-3UTR CCA 90 bp GTTGGCAATCACAAACACTGCTCCACTTGGGAGTTTTACATCGGTTGCCCTCAGTTAGCTTCAGTAACCTaGACCCGACGCGTAGCAGGG +
Preference number: 4 (lower is better)
Translates to: VGNHKHCSTWEFYIGCPQLASVT*TRRVAG
Trigger: CCCTGCTACGCGTCGGGTCCAGGTTACTGAAGCTAA...CTGAGGGCAACCGATGTAAAACTCCCAAGTGGAGCAGTGTTTGTGATTGCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559423.5
ENST00000560119.5
CDS-3UTR CCA 90 bp TCCATCTACCAGGCAGTTCATTCCAGTCAGGTTACTAAGACCAAAGTGTTCCTGGTCCCTCCTGCTGTGTaGCCCACTTCTGAACAGGCC +
Preference number: 4 (lower is better)
Translates to: SIYQAVHSSQVTKTKVFLVPPAV*PTSEQA
Trigger: GGCCTGTTCAGAAGTGGGCCACACAGCAGGAGGGAC...CAGGAACACTTTGGTCTTAGTAACCTGACTGGAATGAACTGCCTGGTAGATGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559208.5
ENST00000559423.5
CDS-3UTR TCA 90 bp ACAATAATCTATATGCTCTCCTATTATGTTGACTCTTCCTGGTGCTCGAACATACCGACGCCCTTCGGCTaGGACCTGCAGCACCGGACG +
Preference number: 4 (lower is better)
Translates to: TIIYMLSYYVDSSWCSNIPTPFG*DLQHRT
Trigger: CGTCCGGTGCTGCAGGTCTCAGCCGAAGGGCGTCGG...TATGTTCGAGCACCAGGAAGAGTCAACATAATAGGAGAGCATATAGATTATTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000559883.5
ENST00000559963.5
ENST00000561074.5
CDS-3UTR TCA 90 bp AATTTACTGTGGCACAGAAAGTCCTGCCAATTCCTAAGTGCCCTAAGTAGTTTCCAGATGTCCACCAGCTaGTCCAGCTCGGGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: NLLWHRKSCQFLSALSSFQMSTS*SSSGQL
Trigger: CAGCTGCCCCGAGCTGGATCAGCTGGTGGACATCTG...GAAACTACTTAGGGCACTTAGGAATTGGCAGGACTTTCTGTGCCACAGTAAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327171.7
ENST00000396509.6
ENST00000544523.5
ENST00000559454.5
ENST00000560031.6
ENST00000560119.5
CDS-3UTR TCA 90 bp TTTGCCTATACCCATAGGCTTTGCTCATCTGCAGTGTGCACTCCACAGCTTTTAGTCCGCAGGTACCATTaGTACTGTGCAGCCTCCCCA +
Preference number: 4 (lower is better)
Translates to: FAYTHRLCSSAVCTPQLLVRRYH*YCAASP
Trigger: TGGGGAGGCTGCACAGTATCAATGGTACCTGCGGAC...TAAAAGCTGTGGAGTGCACACTGCAGATGAGCAAAGCCTATGGGTATAGGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR GCA 90 bp TTGGGGAACCCTGCTCTACAGGACCAGTCCAAGAATGGTGTGGCCTATCTGCAGGTTGACTCTTCCTGGTaGTCGAACATAAAACTTGGG +
Preference number: 4 (lower is better)
Translates to: LGNPALQDQSKNGVAYLQVDSSW*SNIKLG
Trigger: CCCAAGTTTTATGTTCGAGCACCAGGAAGAGTCAAC...CTGCAGATAGGCCACACCATTCTTGGACTGGTCCTGTAGAGCAGGGTTCCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000558956.5
ENST00000559208.5
ENST00000559423.5
CDS-3UTR GCA 90 bp GGCCAGAACTTGGTGGGATATTTCCATCTACCAGGCAGTTCATTCCAGTCAGGTATCCCTAGTTTAGCCTaGACCTCCTCCAGCCTCAGT +
Preference number: 4 (lower is better)
Translates to: GQNLVGYFHLPGSSFQSGIPSLA*TSSSLS
Trigger: ACTGAGGCTGGAGGAGGTGCAGGCTAAACTAGGGAT...ACCTGACTGGAATGAACTGCCTGGTAGATGGAAATATCCCACCAAGTTCTGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560119.5
CDS-3UTR GCA 90 bp GGACAATATTTCATAAGCAATGTATGGTGGCACACCCAAATTACAGTGGCAGGACCAGCTCGGGGCAGCTaGACTCATACATGTCCCGGC +
Preference number: 4 (lower is better)
Translates to: GQYFISNVWWHTQITVAGPARGS*THTCPG
Trigger: GCCGGGACATGTATGAGTGCAGCTGCCCCGAGCTGG...TCCTGCCACTGTAATTTGGGTGTGCCACCATACATTGCTTATGAAATATTGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR GCA 90 bp AATTTACTGTGGCACAGAAAGTCCTGCCAATTCCTAAGTGCCCTAAGTAGTTTCCCAGCTCGGGGCAGCTaGACTCATACATGTCCCGGC +
Preference number: 4 (lower is better)
Translates to: NLLWHRKSCQFLSALSSFPARGS*THTCPG
Trigger: GCCGGGACATGTATGAGTGCAGCTGCCCCGAGCTGG...GAAACTACTTAGGGCACTTAGGAATTGGCAGGACTTTCTGTGCCACAGTAAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327171.7
ENST00000396509.6
ENST00000544523.5
ENST00000559454.5
ENST00000560031.6
ENST00000560119.5
CDS-3UTR GCA 90 bp TCCTCTTACAGTCGCACTATAGTAGTACTGGTCCAGAGTTTAATCGTGTTCTCTCCAGCTCGGGGCAGCTaGACTCATACATGTCCCGGC +
Preference number: 4 (lower is better)
Translates to: SSYSRTIVVLVQSLIVFSPARGS*THTCPG
Trigger: GCCGGGACATGTATGAGTGCAGCTGCCCCGAGCTGG...AGAGAACACGATTAAACTCTGGACCAGTACTACTATAGTGCGACTGTAAGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558399.5
ENST00000559580.5
CDS-3UTR GCA 90 bp TCTTCCTCTTACAGTCGCACTATAGTAGTACTGGTCCAGAGTTTAATCGTGTTCCCAGCTCGGGGCAGCTaGACTCATACATGTCCCGGC +
Preference number: 4 (lower is better)
Translates to: SSSYSRTIVVLVQSLIVFPARGS*THTCPG
Trigger: GCCGGGACATGTATGAGTGCAGCTGCCCCGAGCTGG...GAACACGATTAAACTCTGGACCAGTACTACTATAGTGCGACTGTAAGAGGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558399.5
ENST00000559580.5
CDS-3UTR GCA 90 bp CTGGAGAGGCCAGAACTTGGTGGGATATTTCCATCTACCAGGCAGTTCATTCCAAGTGAGCCGAGATCATaGCACTGCACTCTAGACTGG +
Preference number: 4 (lower is better)
Translates to: LERPELGGIFPSTRQFIPSEPRS*HCTLDW
Trigger: CCAGTCTAGAGTGCAGTGGCATGATCTCGGCTCACT...TGGAATGAACTGCCTGGTAGATGGAAATATCCCACCAAGTTCTGGCCTCTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558775.5
ENST00000559963.5
CDS-3UTR GCA 90 bp ATCTACCAGGCAGTTCATTCCAGTCAGGTTACTAAGACCAAAGTGTTCCTGAATTGCCTGAGGGAGCCCTaGAGCCCGGAAGACGGATAC +
Preference number: 4 (lower is better)
Translates to: IYQAVHSSQVTKTKVFLNCLREP*SPEDGY
Trigger: GTATCCGTCTTCCGGGCTGCAGGGCTCCCTCAGGCA...ATTCAGGAACACTTTGGTCTTAGTAACCTGACTGGAATGAACTGCCTGGTAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000558956.5
ENST00000559208.5
ENST00000559423.5
CDS-3UTR GCA 90 bp GGCTTGGTTTTATCAATCTGGATGTTATTAGCACTAGTACTGAAGTCCCTCCTGGCAGGTCATAGCCTCTaGCTGAGGGAGCCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: GLVLSIWMLLALVLKSLLAGHSL*LREPCS
Trigger: GCTGCAGGGCTCCCTCAGGCAGAGGCTATGACCTGC...CAGGAGGGACTTCAGTACTAGTGCTAATAACATCCAGATTGATAAAACCAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558956.5
ENST00000559208.5
ENST00000559423.5
CDS-3UTR CCA 90 bp AGACTGGTCCATGCCTCCTCCTTCAGTGCCAATGTAACGCTCACTCTTGGCACAGAGGCCAGAACTTGGTaGGATATTTCCATCTACCAG +
Preference number: 4 (lower is better)
Translates to: RLVHASSFSANVTLTLGTEARTW*DISIYQ
Trigger: CTGGTAGATGGAAATATCCCACCAAGTTCTGGCCTC...TGTGCCAAGAGTGAGCGTTACATTGGCACTGAAGGAGGAGGCATGGACCAGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000559208.5
ENST00000559423.5
ENST00000559883.5
ENST00000560119.5
CDS-3UTR CCA 90 bp TGCCTCCTCCTTCAGTGCCAATGTAACGCTCACTCTTGGCACAGATTTCTGCAATCCCGGCAGCTCATGTaGCTCTGGTTCATCAACTCT +
Preference number: 4 (lower is better)
Translates to: CLLLQCQCNAHSWHRFLQSRQLM*LWFINS
Trigger: AGAGTTGATGAACCAGAGCCACATGAGCTGCCGGGA...TTGCAGAAATCTGTGCCAAGAGTGAGCGTTACATTGGCACTGAAGGAGGAGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560119.5
CDS-3UTR CCA 90 bp CTTTTGTATTTAGCCAGGAGCTTCGCAGCCAGCCGACACTCCATCACCCTGATACATTTGCTAGAAAGCTaGGCAGCTTGTCCGCAGGTA +
Preference number: 4 (lower is better)
Translates to: LLYLARSFAASRHSITLIHLLES*AACPQV
Trigger: TACCTGCGGACAAGCTGCCCAGCTTTCTAGCAAATG...TATCAGGGTGATGGAGTGTCGGCTGGCTGCGAAGCTCCTGGCTAAATACAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560119.5
CDS-3UTR CCA 90 bp AATTTACTGTGGCACAGAAAGTCCTGCCAATTCCTAAGTGCCCTAAGTAGTTTCGGATGTTCTGCCACCTaGACCCGACGCGTAGCAGGG +
Preference number: 4 (lower is better)
Translates to: NLLWHRKSCQFLSALSSFGCSAT*TRRVAG
Trigger: CCCTGCTACGCGTCGGGTCCAGGTGGCAGAACATCC...GAAACTACTTAGGGCACTTAGGAATTGGCAGGACTTTCTGTGCCACAGTAAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544523.5
ENST00000560031.6
CDS-3UTR CCA 90 bp CAAGCAAAGGCTACCAAGAAACCTCATGAAGTGAAACAGGACTTTGAGAAGTTCGGATGTTCTGCCACCTaGACCCGACGCGTAGCAGGG +
Preference number: 4 (lower is better)
Translates to: QAKATKKPHEVKQDFEKFGCSAT*TRRVAG
Trigger: CCCTGCTACGCGTCGGGTCCAGGTGGCAGAACATCC...GAACTTCTCAAAGTCCTGTTTCACTTCATGAGGTTTCTTGGTAGCCTTTGCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560031.6
CDS-3UTR CCA 90 bp TTTCCATCTACCAGGCAGTTCATTCCAGTCAGGTTACTAAGACCAAAGTGTTCCGTCCCTCCTGCTGTGTaGCCCACTTCTGAACAGGCC +
Preference number: 4 (lower is better)
Translates to: FPSTRQFIPVRLLRPKCSVPPAV*PTSEQA
Trigger: GGCCTGTTCAGAAGTGGGCCACACAGCAGGAGGGAC...GGAACACTTTGGTCTTAGTAACCTGACTGGAATGAACTGCCTGGTAGATGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559208.5
ENST00000559423.5
3UTR CAA 72 bp CACGACTCCGTCATCTTGAGTGTTTGGACTCAGGATTaGGGTTCGGAGTTCCTCCAGGCTAATTCCCAGACA +
Preference number: 4 (lower is better)
Translates to: HDSVILSVWTQD*GSEFLQANSQT
Trigger: TGTCTGGGAATTAGCCTGGAGGAACTCCGAACCCAAATCCTGAGTCCAAACACTCAAGATGACGGAGTCGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560119.5
3UTR CAA 72 bp CAGGCCTCAAGCAAAACCAAAGCCCCACCTCCAGGTTaGGTAGCAAACAAACTTTGCTTCTCCGGTGCTAAG +
Preference number: 4 (lower is better)
Translates to: QASSKTKAPPPG*VANKLCFSGAK
Trigger: CTTAGCACCGGAGAAGCAAAGTTTGTTTGCTACCAAACCTGGAGGTGGGGCTTTGGTTTTGCTTGAGGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560119.5
CDS-3UTR TCA 90 bp GAGGCCAGAACTTGGTGGGATATTTCCATCTACCAGGCAGTTCATTCCAGTCAGTTACTTTCACCGGAATaGGATGCGTCCAGAGTCCCA +
Preference number: 4 (lower is better)
Translates to: EARTWWDISIYQAVHSSQLLSPE*DASRVP
Trigger: TGGGACTCTGGACGCATCTCATTCCGGTGAAAGTAA...CTGACTGGAATGAACTGCCTGGTAGATGGAAATATCCCACCAAGTTCTGGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000558775.5
ENST00000559883.5
ENST00000559963.5
CDS-3UTR TCA 90 bp ATCTTATTCTTCACTACATACCAAAGCAAAGCCTTCACTCTCACTGAGCCTCCTTCCTTCCCAGCACTGTaGGCGTCACCAAGCCAGCAC +
Preference number: 4 (lower is better)
Translates to: ILFFTTYQSKAFTLTEPPSFPAL*ASPSQH
Trigger: GTGCTGGCTTGGTGACGCTCACAGTGCTGGGAAGGA...AGGAGGCTCAGTGAGAGTGAAGGCTTTGCTTTGGTATGTAGTGAAGAATAAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR TCA 90 bp AATTTACTGTGGCACAGAAAGTCCTGCCAATTCCTAAGTGCCCTAAGTAGTTTCTCCTTCCCAGCACTGTaGGCGTCACCAAGCCAGCAC +
Preference number: 4 (lower is better)
Translates to: NLLWHRKSCQFLSALSSFSFPAL*ASPSQH
Trigger: GTGCTGGCTTGGTGACGCTCACAGTGCTGGGAAGGA...GAAACTACTTAGGGCACTTAGGAATTGGCAGGACTTTCTGTGCCACAGTAAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327171.7
ENST00000396509.6
ENST00000544523.5
ENST00000559454.5
ENST00000560031.6
ENST00000560119.5
CDS-3UTR TCA 90 bp GGACAATATTTCATAAGCAATGTATGGTGGCACACCCAAATTACAGTGGCAGGATCCTTCCCAGCACTGTaGGCGTCACCAAGCCAGCAC +
Preference number: 4 (lower is better)
Translates to: GQYFISNVWWHTQITVAGSFPAL*ASPSQH
Trigger: GTGCTGGCTTGGTGACGCTCACAGTGCTGGGAAGGA...TCCTGCCACTGTAATTTGGGTGTGCCACCATACATTGCTTATGAAATATTGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR TCA 90 bp GAAATGGGAAGTTGCTGCCTTATTCATCTCCACACAACTGTTGGCAATCACAAATCCTTCCCAGCACTGTaGGCGTCACCAAGCCAGCAC +
Preference number: 4 (lower is better)
Translates to: EMGSCCLIHLHTTVGNHKSFPAL*ASPSQH
Trigger: GTGCTGGCTTGGTGACGCTCACAGTGCTGGGAAGGA...TTTGTGATTGCCAACAGTTGTGTGGAGATGAATAAGGCAGCAACTTCCCATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559423.5
ENST00000560119.5
CDS-3UTR TCA 90 bp TGTGGGCCAAACTATATACATCTGCAGACCAGATGTGGCCCATGGGCTGCTGGGTTCTTCTGCAAGAAATaGTATAGACTGGTCCATGCC +
Preference number: 4 (lower is better)
Translates to: CGPNYIHLQTRCGPWAAGFFCKK*YRLVHA
Trigger: GGCATGGACCAGTCTATATCATTTCTTGCAGAAGAA...CCCAGCAGCCCATGGGCCACATCTGGTCTGCAGATGTATATAGTTTGGCCCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR TCA 90 bp TTTCATAAGCAATGTATGGTGGCACACCCAAATTACAGTGGCAGGAGAGGATACGTCCGCAGGTACCATTaGTACTGTGCAGCCTCCCCA +
Preference number: 4 (lower is better)
Translates to: FHKQCMVAHPNYSGRRGYVRRYH*YCAASP
Trigger: TGGGGAGGCTGCACAGTATCAATGGTACCTGCGGAC...GTATCCTCTCCTGCCACTGTAATTTGGGTGTGCCACCATACATTGCTTATGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR TCA 90 bp ATTTCTGCAAGTTCCACCTTGGATAGATTCCTTCCCAGCACTGTGAGCGTCACCATCACGAGACTTCTGTaGCAGGAGCCGTTTTCTTCC +
Preference number: 4 (lower is better)
Translates to: ISASSTLDRFLPSTVSVTITRLL*QEPFSS
Trigger: GGAAGAAAACGGCTCCTGTCACAGAAGTCTCGTGAT...GGTGACGCTCACAGTGCTGGGAAGGAATCTATCCAAGGTGGAACTTGCAGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559208.5
CDS-3UTR TCA 90 bp GGCCAGAACTTGGTGGGATATTTCCATCTACCAGGCAGTTCATTCCAGTCAGGTCTTCTGAACAGGCCATaGAGCAGTAACAGGGATTGG +
Preference number: 4 (lower is better)
Translates to: GQNLVGYFHLPGSSFQSGLLNRP*SSNRDW
Trigger: CCAATCCCTGTTACTGCTTCATGGCCTGTTCAGAAG...ACCTGACTGGAATGAACTGCCTGGTAGATGGAAATATCCCACCAAGTTCTGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559208.5
ENST00000559423.5
CDS-3UTR TCA 90 bp CTGGAGAGGCCAGAACTTGGTGGGATATTTCCATCTACCAGGCAGTTCATTCCACTTCTGAACAGGCCATaGAGCAGTAACAGGGATTGG +
Preference number: 4 (lower is better)
Translates to: LERPELGGIFPSTRQFIPLLNRP*SSNRDW
Trigger: CCAATCCCTGTTACTGCTTCATGGCCTGTTCAGAAG...TGGAATGAACTGCCTGGTAGATGGAAATATCCCACCAAGTTCTGGCCTCTCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559208.5
ENST00000559423.5
CDS-3UTR GCA 90 bp CACATACCTGCATACCTGCTTTACAATGGGGTGCATATATACAAACAAGCTTTGCCTTCGGCTGAGACCTaGAGCACCGGACGATGTCCC +
Preference number: 4 (lower is better)
Translates to: HIPAYLLYNGVHIYKQALPSAET*STGRCP
Trigger: GGGACATCGTCCGGTGCTGCAGGTCTCAGCCGAAGG...CAAAGCTTGTTTGTATATATGCACCCCATTGTAAAGCAGGTATGCAGGTATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327171.7
CDS-3UTR GCA 90 bp GTTCATTCCAGTCAGGTTACTAAGACCAAAGTGTTCCTGAATTCCTTTAAGTCCCCTTCGGCTGAGACCTaGAGCACCGGACGATGTCCC +
Preference number: 4 (lower is better)
Translates to: VHSSQVTKTKVFLNSFKSPSAET*STGRCP
Trigger: GGGACATCGTCCGGTGCTGCAGGTCTCAGCCGAAGG...GGACTTAAAGGAATTCAGGAACACTTTGGTCTTAGTAACCTGACTGGAATGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558775.5
ENST00000559883.5
ENST00000559963.5
CDS-3UTR GCA 90 bp AGAGCGTACGTTTTCACAGGTTCTACAGCTATTAGCACATCTTGTTCTACAGCCCTGGAAACTGCTCGATaGGAGCGCAGTTTCCGACGC +
Preference number: 4 (lower is better)
Translates to: RAYVFTGSTAISTSCSTALETAR*ERSFRR
Trigger: GCGTCGGAAACTGCGCTCGCATCGAGCAGTTTCCAG...GGCTGTAGAACAAGATGTGCTAATAGCTGTAGAACCTGTGAAAACGTACGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558775.5
ENST00000559883.5
ENST00000559963.5
ENST00000561074.5
CDS-3UTR GCA 90 bp AAGTCCGGATACAAGGGATTTGTATTGGCCAGTTGGAGAGCGTACGTTTTCACACAGGAGGCTGGAAACTaGTCGATGCGAGCGCAGTTT +
Preference number: 4 (lower is better)
Translates to: KSGYKGFVLASWRAYVFTQEAGN*SMRAQF
Trigger: AAACTGCGCTCGCATCGAGCAGTTTCCAGCCTCCTG...TGTGAAAACGTACGCTCTCCAACTGGCCAATACAAATCCCTTGTATCCGGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558775.5
ENST00000559883.5
ENST00000559963.5
CDS-3UTR GCA 90 bp GAGGCCAGAACTTGGTGGGATATTTCCATCTACCAGGCAGTTCATTCCAGTCAGTTCACCGGAATGAGATaGGTCCAGAGTCCCAAGCAA +
Preference number: 4 (lower is better)
Translates to: EARTWWDISIYQAVHSSQFTGMR*VQSPKQ
Trigger: TTGCTTGGGACTCTGGACGCATCTCATTCCGGTGAA...CTGACTGGAATGAACTGCCTGGTAGATGGAAATATCCCACCAAGTTCTGGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000558775.5
ENST00000559883.5
ENST00000559963.5
CDS-3UTR GCA 90 bp CTGGTCCATGCCTCCTCCTTCAGTGCCAATGTAACGCTCACTCTTGGCACAGATGTTGACTCTTCCTGGTaGTCGAACATAAAACTTGGG +
Preference number: 4 (lower is better)
Translates to: LVHASSFSANVTLTLGTDVDSSW*SNIKLG
Trigger: CCCAAGTTTTATGTTCGAGCACCAGGAAGAGTCAAC...ATCTGTGCCAAGAGTGAGCGTTACATTGGCACTGAAGGAGGAGGCATGGACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000559208.5
ENST00000559423.5
ENST00000559883.5
ENST00000560119.5
CDS-3UTR GCA 90 bp CTTTTGTATTTAGCCAGGAGCTTCGCAGCCAGCCGACACTCCATCACCCTGATATGGCACAGAAAGTCCTaGCAATTCCTAAGTGCCCTA +
Preference number: 4 (lower is better)
Translates to: LLYLARSFAASRHSITLIWHRKS*QFLSAL
Trigger: TAGGGCACTTAGGAATTGGCAGGACTTTCTGTGCCA...TATCAGGGTGATGGAGTGTCGGCTGGCTGCGAAGCTCCTGGCTAAATACAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560119.5
CDS-3UTR GCA 90 bp GGACAATATTTCATAAGCAATGTATGGTGGCACACCCAAATTACAGTGGCAGGAGGGACAGCAGGCACATaGCACCACTCCCAGCTAAGG +
Preference number: 4 (lower is better)
Translates to: GQYFISNVWWHTQITVAGGTAGT*HHSQLR
Trigger: CCTTAGCTGGGAGTGGTGGCATGTGCCTGCTGTCCC...TCCTGCCACTGTAATTTGGGTGTGCCACCATACATTGCTTATGAAATATTGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR GCA 90 bp CAGATTTCTGCAAGTTCCACCTTGGATAGATTCCTTCCCAGCACTGTGAGCGTCAGTGAGCCGAGATCATaGCACTGCACTCTAGACTGT +
Preference number: 4 (lower is better)
Translates to: QISASSTLDRFLPSTVSVSEPRS*HCTLDC
Trigger: ACAGTCTAGAGTGCAGTGGCATGATCTCGGCTCACT...GACGCTCACAGTGCTGGGAAGGAATCTATCCAAGGTGGAACTTGCAGAAATCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559883.5
CDS-3UTR CCA 90 bp ACTGAAGTCCGGATACAAGGGATTTGTATTGGCCAGTTGGAGAGCGTACGTTTTCTTTACCCAGGAGGCTaGAAACTGCTCGATGCGAGC +
Preference number: 4 (lower is better)
Translates to: TEVRIQGICIGQLESVRFLYPGG*KLLDAS
Trigger: GCTCGCATCGAGCAGTTTCCAGCCTCCTGGGTAAAG...AAAACGTACGCTCTCCAACTGGCCAATACAAATCCCTTGTATCCGGACTTCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558775.5
ENST00000559883.5
ENST00000559963.5
CDS-3UTR CCA 90 bp TCTGCAAGTTCCACCTTGGATAGATTCCTTCCCAGCACTGTGAGCGTCACCAAGACAAGGGATTTGTATTaGCCAGTTGGAGAGCGTACG +
Preference number: 4 (lower is better)
Translates to: SASSTLDRFLPSTVSVTKTRDLY*PVGERT
Trigger: CGTACGCTCTCCAACTGGCCAATACAAATCCCTTGT...CTTGGTGACGCTCACAGTGCTGGGAAGGAATCTATCCAAGGTGGAACTTGCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000559208.5
ENST00000559423.5
ENST00000559883.5
ENST00000560119.5
CDS-3UTR CCA 90 bp GTCCATGCCTCCTCCTTCAGTGCCAATGTAACGCTCACTCTTGGCACAGATTTCACAAGGGATTTGTATTaGCCAGTTGGAGAGCGTACG +
Preference number: 4 (lower is better)
Translates to: VHASSFSANVTLTLGTDFTRDLY*PVGERT
Trigger: CGTACGCTCTCCAACTGGCCAATACAAATCCCTTGT...GAAATCTGTGCCAAGAGTGAGCGTTACATTGGCACTGAAGGAGGAGGCATGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000559208.5
ENST00000559423.5
ENST00000559883.5
ENST00000560119.5
CDS-3UTR CCA 90 bp AGCACTAGTACTGAAGTCCGGATACAAGGGATTTGTATTGGCCAGTTGGAGAGCAACAGACCAAAGCACTaGAGCTGGAGAGGCCAGAAC +
Preference number: 4 (lower is better)
Translates to: STSTEVRIQGICIGQLESNRPKH*SWRGQN
Trigger: GTTCTGGCCTCTCCAGCTCCAGTGCTTTGGTCTGTT...GCTCTCCAACTGGCCAATACAAATCCCTTGTATCCGGACTTCAGTACTAGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000558775.5
ENST00000559883.5
ENST00000559963.5
CDS-3UTR CCA 90 bp CCACACAACTGTTGGCAATCACAAACACTGCTCCACTTGGGAGTTTTACATCGGAACAGACCAAAGCACTaGAGCTGGAGAGGCCAGAAC +
Preference number: 4 (lower is better)
Translates to: PHNCWQSQTLLHLGVLHRNRPKH*SWRGQN
Trigger: GTTCTGGCCTCTCCAGCTCCAGTGCTTTGGTCTGTT...CCGATGTAAAACTCCCAAGTGGAGCAGTGTTTGTGATTGCCAACAGTTGTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559423.5
ENST00000560119.5
CDS-3UTR CCA 90 bp GGCCAGAACTTGGTGGGATATTTCCATCTACCAGGCAGTTCATTCCAGTCAGGTCATATCTTCTTAAACTaGAGCACTCGCGCAGCCTCG +
Preference number: 4 (lower is better)
Translates to: GQNLVGYFHLPGSSFQSGHIFLN*STRAAS
Trigger: CGAGGCTGCGCGAGTGCTCCAGTTTAAGAAGATATG...ACCTGACTGGAATGAACTGCCTGGTAGATGGAAATATCCCACCAAGTTCTGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560119.5
CDS-3UTR CCA 90 bp ACAAACACTGCTCCACTTGGGAGTTTTACATCGGTTGCCCTCAGAGGACTAAATTTAGCTTCAGTAACCTaGACCCGACGCGTAGCAGGG +
Preference number: 4 (lower is better)
Translates to: TNTAPLGSFTSVALRGLNLASVT*TRRVAG
Trigger: CCCTGCTACGCGTCGGGTCCAGGTTACTGAAGCTAA...ATTTAGTCCTCTGAGGGCAACCGATGTAAAACTCCCAAGTGGAGCAGTGTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559423.5
ENST00000560119.5
CDS-3UTR CCA 90 bp AGTGCCAATGTAACGCTCACTCTTGGCACAGATTTCTGCAAGTTCCACCTTGGAAGCAGTAACAGGGATTaGGGAACCCTGCTCTACAGG +
Preference number: 4 (lower is better)
Translates to: SANVTLTLGTDFCKFHLGSSNRD*GTLLYR
Trigger: CCTGTAGAGCAGGGTTCCCCAATCCCTGTTACTGCT...TCCAAGGTGGAACTTGCAGAAATCTGTGCCAAGAGTGAGCGTTACATTGGCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559208.5
ENST00000559423.5
3UTR CAA 72 bp AGCTTCGCAGCCAGCCGACACTCCATCACCCTGATATaGAAATGGGAAGTTGCTGCCTTATTCATCTCCACA +
Preference number: 4 (lower is better)
Translates to: SFAASRHSITLI*KWEVAALFIST
Trigger: TGTGGAGATGAATAAGGCAGCAACTTCCCATTTCAATATCAGGGTGATGGAGTGTCGGCTGGCTGCGAAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560119.5
CDS-3UTR TCA 90 bp TGCCTCCTCCTTCAGTGCCAATGTAACGCTCACTCTTGGCACAGATTTCTGCAAGCTCTCCTATTATGTTaGCTCTTCCTGGTGCTCGAA +
Preference number: 4 (lower is better)
Translates to: CLLLQCQCNAHSWHRFLQALLLC*LFLVLE
Trigger: TTCGAGCACCAGGAAGAGTCAACATAATAGGAGAGC...TTGCAGAAATCTGTGCCAAGAGTGAGCGTTACATTGGCACTGAAGGAGGAGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000559208.5
ENST00000559423.5
ENST00000559883.5
ENST00000560119.5
CDS-3UTR TCA 90 bp ATATTGAAATGGGAAGTTGCTGCCTTATTCATCTCCACACAACTGTTGGCAATCTCCTTCCCAGCACTGTaGGCGTCACCAAGCCAGCAC +
Preference number: 4 (lower is better)
Translates to: ILKWEVAALFISTQLLAISFPAL*ASPSQH
Trigger: GTGCTGGCTTGGTGACGCTCACAGTGCTGGGAAGGA...GATTGCCAACAGTTGTGTGGAGATGAATAAGGCAGCAACTTCCCATTTCAATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559423.5
ENST00000560119.5
CDS-3UTR TCA 90 bp AATTTACTGTGGCACAGAAAGTCCTGCCAATTCCTAAGTGCCCTAAGTAGTTTCGTCCGCAGGTACCATTaGTACTGTGCAGCCTCCCCA +
Preference number: 4 (lower is better)
Translates to: NLLWHRKSCQFLSALSSFVRRYH*YCAASP
Trigger: TGGGGAGGCTGCACAGTATCAATGGTACCTGCGGAC...GAAACTACTTAGGGCACTTAGGAATTGGCAGGACTTTCTGTGCCACAGTAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327171.7
ENST00000396509.6
ENST00000544523.5
ENST00000559454.5
ENST00000560031.6
ENST00000560119.5
CDS-3UTR GCA 90 bp GGACAATATTTCATAAGCAATGTATGGTGGCACACCCAAATTACAGTGGCAGGACTGGAAACTGCTCGATaGGAGCGCAGTTTCCGACGC +
Preference number: 4 (lower is better)
Translates to: GQYFISNVWWHTQITVAGLETAR*ERSFRR
Trigger: GCGTCGGAAACTGCGCTCGCATCGAGCAGTTTCCAG...TCCTGCCACTGTAATTTGGGTGTGCCACCATACATTGCTTATGAAATATTGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327171.7
CDS-3UTR GCA 90 bp ACTTGGTGGGATATTTCCATCTACCAGGCAGTTCATTCCAGTCAGGTTACTAAGCAGGAGGCTGGAAACTaGTCGATGCGAGCGCAGTTT +
Preference number: 4 (lower is better)
Translates to: TWWDISIYQAVHSSQVTKQEAGN*SMRAQF
Trigger: AAACTGCGCTCGCATCGAGCAGTTTCCAGCCTCCTG...CTTAGTAACCTGACTGGAATGAACTGCCTGGTAGATGGAAATATCCCACCAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000558775.5
ENST00000559883.5
ENST00000559963.5
CDS-3UTR GCA 90 bp CTAGTACTGAAGTCCGGATACAAGGGATTTGTATTGGCCAGTTGGAGAGCGTACTTCACCGGAATGAGATaGGTCCAGAGTCCCAAGCAA +
Preference number: 4 (lower is better)
Translates to: LVLKSGYKGFVLASWRAYFTGMR*VQSPKQ
Trigger: TTGCTTGGGACTCTGGACGCATCTCATTCCGGTGAA...GTACGCTCTCCAACTGGCCAATACAAATCCCTTGTATCCGGACTTCAGTACTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000558775.5
ENST00000559883.5
ENST00000559963.5
CDS-3UTR GCA 90 bp TTTGCCTATACCCATAGGCTTTGCTCATCTGCAGTGTGCACTCCACAGCTTTTAATCCCTAGTTTAGCCTaGACCTCCTCCAGCCTCAGT +
Preference number: 4 (lower is better)
Translates to: FAYTHRLCSSAVCTPQLLIPSLA*TSSSLS
Trigger: ACTGAGGCTGGAGGAGGTGCAGGCTAAACTAGGGAT...TAAAAGCTGTGGAGTGCACACTGCAGATGAGCAAAGCCTATGGGTATAGGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR GCA 90 bp TGTGGGCCAAACTATATACATCTGCAGACCAGATGTGGCCCATGGGCTGCTGGGCCAGCCAAACATTTCTaGCCACTCTTGATATACATA +
Preference number: 4 (lower is better)
Translates to: CGPNYIHLQTRCGPWAAGPAKHF*PLLIYI
Trigger: TATGTATATCAAGAGTGGGCAGAAATGTTTGGCTGG...CCCAGCAGCCCATGGGCCACATCTGGTCTGCAGATGTATATAGTTTGGCCCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR GCA 90 bp AATTTACTGTGGCACAGAAAGTCCTGCCAATTCCTAAGTGCCCTAAGTAGTTTCTCTCCCAGGCTGGAGTaGAGTGCTGCAGTCATGGCT +
Preference number: 4 (lower is better)
Translates to: NLLWHRKSCQFLSALSSFSPRLE*SAAVMA
Trigger: AGCCATGACTGCAGCACTGCACTCCAGCCTGGGAGA...GAAACTACTTAGGGCACTTAGGAATTGGCAGGACTTTCTGTGCCACAGTAAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR GCA 90 bp AATTTACTGTGGCACAGAAAGTCCTGCCAATTCCTAAGTGCCCTAAGTAGTTTCCCATCTAGGATGTTCTaGCACCTGGACCCGACGCGT +
Preference number: 4 (lower is better)
Translates to: NLLWHRKSCQFLSALSSFPSRMF*HLDPTR
Trigger: ACGCGTCGGGTCCAGGTGGCAGAACATCCTAGATGG...GAAACTACTTAGGGCACTTAGGAATTGGCAGGACTTTCTGTGCCACAGTAAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544523.5
CDS-3UTR GCA 90 bp GCCAGTTGGAGAGCGTACGTTTTCACAGGTTCTACAGCTATTAGCACATCTTGTAGTGAGCCAAGATCGTaGCACTTGCACTCTAGCCTC +
Preference number: 4 (lower is better)
Translates to: ASWRAYVFTGSTAISTSCSEPRS*HLHSSL
Trigger: GAGGCTAGAGTGCAAGTGGCACGATCTTGGCTCACT...ACAAGATGTGCTAATAGCTGTAGAACCTGTGAAAACGTACGCTCTCCAACTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561074.5
CDS-3UTR GCA 90 bp GTCCACATAAGAAATAGTTGTGCCACAAAGGCTTGGTTTTATCAATCTGGATGTGCAGGTCATAGCCTCTaGCTGAGGGAGCCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: VHIRNSCATKAWFYQSGCAGHSL*LREPCS
Trigger: GCTGCAGGGCTCCCTCAGGCAGAGGCTATGACCTGC...ACATCCAGATTGATAAAACCAAGCCTTTGTGGCACAACTATTTCTTATGTGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558956.5
ENST00000559208.5
ENST00000559423.5
CDS-3UTR CCA 90 bp TTAGCACTAGTACTGAAGTCCCTCCTGCTGTGTGGCCCACTTCTGAACAGGCCATTTGTATTGGCCAGTTaGAGAGCGTACGTTTTCACA +
Preference number: 4 (lower is better)
Translates to: LALVLKSLLLCGPLLNRPFVLAS*RAYVFT
Trigger: TGTGAAAACGTACGCTCTCCAACTGGCCAATACAAA...TGGCCTGTTCAGAAGTGGGCCACACAGCAGGAGGGACTTCAGTACTAGTGCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558956.5
ENST00000559208.5
ENST00000559423.5
CDS-3UTR CCA 90 bp CAATCACAAACACTGCTCCACTTGGGAGTTTTACATCGGTTGCCCTCAGAGGACGGAGAGGCCAGAACTTaGTGGGATATTTCCATCTAC +
Preference number: 4 (lower is better)
Translates to: QSQTLLHLGVLHRLPSEDGEART*WDISIY
Trigger: GTAGATGGAAATATCCCACCAAGTTCTGGCCTCTCC...GTCCTCTGAGGGCAACCGATGTAAAACTCCCAAGTGGAGCAGTGTTTGTGATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559423.5
ENST00000560119.5
CDS-3UTR CCA 90 bp GGCCAGAACTTGGTGGGATATTTCCATCTACCAGGCAGTTCATTCCAGTCAGGTGGAGAGGCCAGAACTTaGTGGGATATTTCCATCTAC +
Preference number: 4 (lower is better)
Translates to: GQNLVGYFHLPGSSFQSGGEART*WDISIY
Trigger: GTAGATGGAAATATCCCACCAAGTTCTGGCCTCTCC...ACCTGACTGGAATGAACTGCCTGGTAGATGGAAATATCCCACCAAGTTCTGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558775.5
ENST00000559208.5
ENST00000559423.5
ENST00000559883.5
ENST00000559963.5
ENST00000560119.5
CDS-3UTR CCA 90 bp CAACTGTTGGCAATCACAAACACTGCTCCACTTGGGAGTTTTACATCGGTTGCCTTTGGACTCAGGATTTaGGTTCGGAGTTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: QLLAITNTAPLGSFTSVAFGLRI*VRSSSR
Trigger: CCTGGAGGAACTCCGAACCCAAATCCTGAGTCCAAA...GGCAACCGATGTAAAACTCCCAAGTGGAGCAGTGTTTGTGATTGCCAACAGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560119.5
CDS-3UTR CCA 90 bp GCCAGAACTTGGTGGGATATTTCCATCTACCAGGCAGTTCATTCCAGTCAGGTTAACTCTCCCAGCAGCTaGACCATGTTTTCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: ARTWWDISIYQAVHSSQVNSPSS*TMFSGA
Trigger: AGCACCTGAAAACATGGTCCAGCTGCTGGGAGAGTT...AACCTGACTGGAATGAACTGCCTGGTAGATGGAAATATCCCACCAAGTTCTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560119.5
CDS-3UTR CCA 90 bp AAACACTGCTCCACTTGGGAGTTTTACATCGGTTGCCCTCAGAGGACTAAATTCCAGCTCATGTGGCTCTaGTTCATCAACTCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: KHCSTWEFYIGCPQRTKFQLMWL*FINSPS
Trigger: GCTGGGAGAGTTGATGAACCAGAGCCACATGAGCTG...GAATTTAGTCCTCTGAGGGCAACCGATGTAAAACTCCCAAGTGGAGCAGTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560119.5
CDS-3UTR CCA 90 bp TGTGGGCCAAACTATATACATCTGCAGACCAGATGTGGCCCATGGGCTGCTGGGATAAGCAATGTATGGTaGCACACCCAAATTACAGTG +
Preference number: 4 (lower is better)
Translates to: CGPNYIHLQTRCGPWAAGISNVW*HTQITV
Trigger: CACTGTAATTTGGGTGTGCCACCATACATTGCTTAT...CCCAGCAGCCCATGGGCCACATCTGGTCTGCAGATGTATATAGTTTGGCCCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CCA 90 bp CAGATTTCTGCAAGTTCCACCTTGGATAGATTCCTTCCCAGCACTGTGAGCGTCTGGTGCAGTCTCTTTTaGAGTCGTAGCGAATCAGCT +
Preference number: 4 (lower is better)
Translates to: QISASSTLDRFLPSTVSVWCSLF*SRSESA
Trigger: AGCTGATTCGCTACGACTCCAAAAGAGACTGCACCA...GACGCTCACAGTGCTGGGAAGGAATCTATCCAAGGTGGAACTTGCAGAAATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559883.5
3UTR CAA 72 bp TTCCATCACTCCTCTGGTAATAAGCTTTGTGCACATTaGCTAGAAAGCTGGGCAGCTTGTCCGCAGGTACCA +
Preference number: 4 (lower is better)
Translates to: FHHSSGNKLCAH*LESWAACPQVP
Trigger: TGGTACCTGCGGACAAGCTGCCCAGCTTTCTAGCAAATGTGCACAAAGCTTATTACCAGAGGAGTGATGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560119.5
CDS-3UTR TCA 90 bp TGGCCAGTTGGAGAGCGTACGTTTTCACAGGTTCTACAGCTATTAGCACATCTTTTACTTTCACCGGAATaGGATGCGTCCAGAGTCCCA +
Preference number: 4 (lower is better)
Translates to: WPVGERTFSQVLQLLAHLLLSPE*DASRVP
Trigger: TGGGACTCTGGACGCATCTCATTCCGGTGAAAGTAA...AAGATGTGCTAATAGCTGTAGAACCTGTGAAAACGTACGCTCTCCAACTGGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000558775.5
ENST00000559883.5
ENST00000559963.5
ENST00000561074.5
CDS-3UTR TCA 90 bp GCCAGAACTTGGTGGGATATTTCCATCTACCAGGCAGTTCATTCCAGTCAGGTTGCTCTCCTATTATGTTaGCTCTTCCTGGTGCTCGAA +
Preference number: 4 (lower is better)
Translates to: ARTWWDISIYQAVHSSQVALLLC*LFLVLE
Trigger: TTCGAGCACCAGGAAGAGTCAACATAATAGGAGAGC...AACCTGACTGGAATGAACTGCCTGGTAGATGGAAATATCCCACCAAGTTCTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000559208.5
ENST00000559423.5
ENST00000559883.5
ENST00000559963.5
ENST00000560119.5
CDS-3UTR TCA 90 bp AGTGCCAATGTAACGCTCACTCTTGGCACAGATTTCTGCAAGTTCCACCTTGGAGCTCTCCTATTATGTTaGCTCTTCCTGGTGCTCGAA +
Preference number: 4 (lower is better)
Translates to: SANVTLTLGTDFCKFHLGALLLC*LFLVLE
Trigger: TTCGAGCACCAGGAAGAGTCAACATAATAGGAGAGC...TCCAAGGTGGAACTTGCAGAAATCTGTGCCAAGAGTGAGCGTTACATTGGCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000559208.5
ENST00000559423.5
ENST00000559883.5
ENST00000560119.5
CDS-3UTR TCA 90 bp TTATTTTCTTCCTCTTACAGTCGCACTATAGTAGTACTGGTCCAGAGTTTAATCCAGATGTCCACCAGCTaGTCCAGCTCGGGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: LFSSSYSRTIVVLVQSLIQMSTS*SSSGQL
Trigger: CAGCTGCCCCGAGCTGGATCAGCTGGTGGACATCTG...GATTAAACTCTGGACCAGTACTACTATAGTGCGACTGTAAGAGGAAGAAAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558399.5
ENST00000559580.5
CDS-3UTR TCA 90 bp TCCGAAGCTGAAATTGAGAGAGAATGTGTGGCATCACTATCGTCATCATCATCAGTAAGTCGTGACCCTTaGGCCCCAAACTTCCGACAG +
Preference number: 4 (lower is better)
Translates to: SEAEIERECVASLSSSSSVSRDP*APNFRQ
Trigger: CTGTCGGAAGTTTGGGGCTCAAGGGTCACGACTTAC...TGATGATGATGACGATAGTGATGCCACACATTCTCTCTCAATTTCAGCTTCGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR TCA 90 bp AATTTACTGTGGCACAGAAAGTCCTGCCAATTCCTAAGTGCCCTAAGTAGTTTCGTAAGTCGTGACCCTTaGGCCCCAAACTTCCGACAG +
Preference number: 4 (lower is better)
Translates to: NLLWHRKSCQFLSALSSFVSRDP*APNFRQ
Trigger: CTGTCGGAAGTTTGGGGCTCAAGGGTCACGACTTAC...GAAACTACTTAGGGCACTTAGGAATTGGCAGGACTTTCTGTGCCACAGTAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327171.7
ENST00000396509.6
ENST00000544523.5
ENST00000559454.5
ENST00000560031.6
ENST00000560119.5
CDS-3UTR TCA 90 bp TCCTCTTACAGTCGCACTATAGTAGTACTGGTCCAGAGTTTAATCGTGTTCTCTGTAAGTCGTGACCCTTaGGCCCCAAACTTCCGACAG +
Preference number: 4 (lower is better)
Translates to: SSYSRTIVVLVQSLIVFSVSRDP*APNFRQ
Trigger: CTGTCGGAAGTTTGGGGCTCAAGGGTCACGACTTAC...AGAGAACACGATTAAACTCTGGACCAGTACTACTATAGTGCGACTGTAAGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559580.5
CDS-3UTR TCA 90 bp TTTCATAAGCAATGTATGGTGGCACACCCAAATTACAGTGGCAGGAGAGGATACTGCTCCAGTAAGTCGTaGCCCTTGAGCCCCAAACTT +
Preference number: 4 (lower is better)
Translates to: FHKQCMVAHPNYSGRRGYCSSKS*PLSPKL
Trigger: AAGTTTGGGGCTCAAGGGTCACGACTTACTGGAGCA...GTATCCTCTCCTGCCACTGTAATTTGGGTGTGCCACCATACATTGCTTATGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR TCA 90 bp AACTCTCCCAGCAGCTGGACCATGTTTTCAGGTGCTTCTTCACATATCTTCTTATGCTCCAGTAAGTCGTaGCCCTTGAGCCCCAAACTT +
Preference number: 4 (lower is better)
Translates to: NSPSSWTMFSGASSHIFLCSSKS*PLSPKL
Trigger: AAGTTTGGGGCTCAAGGGTCACGACTTACTGGAGCA...TAAGAAGATATGTGAAGAAGCACCTGAAAACATGGTCCAGCTGCTGGGAGAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560119.5
CDS-3UTR TCA 90 bp TTTGCCTATACCCATAGGCTTTGCTCATCTGCAGTGTGCACTCCACAGCTTTTAATCCCTCGCTTAGAATaGCCATGTGTGTCCCCCAAA +
Preference number: 4 (lower is better)
Translates to: FAYTHRLCSSAVCTPQLLIPRLE*PCVSPK
Trigger: TTTGGGGGACACACATGGTCATTCTAAGCGAGGGAT...TAAAAGCTGTGGAGTGCACACTGCAGATGAGCAAAGCCTATGGGTATAGGCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR TCA 90 bp TTTGCCTATACCCATAGGCTTTGCTCATCTGCAGTGTGCACTCCACAGCTTTTACTGATAAAGGGCAAGTaGCCTCAGCTGGTAAGTGGT +
Preference number: 4 (lower is better)
Translates to: FAYTHRLCSSAVCTPQLLLIKGK*PQLVSG
Trigger: ACCACTTACCAGCTGAGGTCACTTGCCCTTTATCAG...TAAAAGCTGTGGAGTGCACACTGCAGATGAGCAAAGCCTATGGGTATAGGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR TCA 90 bp GTTGGCAATCACAAACACTGCTCCACTTGGGAGTTTTACATCGGTTGCCCTCAGGTAATCCCAGCTATTTaGGAGACTGAAGTGGGAGAA +
Preference number: 4 (lower is better)
Translates to: VGNHKHCSTWEFYIGCPQVIPAI*ETEVGE
Trigger: TTCTCCCACTTCAGTCTCTCAAATAGCTGGGATTAC...CTGAGGGCAACCGATGTAAAACTCCCAAGTGGAGCAGTGTTTGTGATTGCCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560119.5
CDS-3UTR GCA 90 bp ACAGGTTCTACAGCTATTAGCACATCTTGTTCTACAGCCATAGGAAGAACAGAACTGGAAACTGCTCGATaGGAGCGCAGTTTCCGACGC +
Preference number: 4 (lower is better)
Translates to: TGSTAISTSCSTAIGRTELETAR*ERSFRR
Trigger: GCGTCGGAAACTGCGCTCGCATCGAGCAGTTTCCAG...TTCTGTTCTTCCTATGGCTGTAGAACAAGATGTGCTAATAGCTGTAGAACCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558775.5
ENST00000559883.5
ENST00000559963.5
ENST00000561074.5
CDS-3UTR GCA 90 bp TGCCTCCTCCTTCAGTGCCAATGTAACGCTCACTCTTGGCACAGATTTCTGCAAGTTGACTCTTCCTGGTaGTCGAACATAAAACTTGGG +
Preference number: 4 (lower is better)
Translates to: CLLLQCQCNAHSWHRFLQVDSSW*SNIKLG
Trigger: CCCAAGTTTTATGTTCGAGCACCAGGAAGAGTCAAC...TTGCAGAAATCTGTGCCAAGAGTGAGCGTTACATTGGCACTGAAGGAGGAGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000559208.5
ENST00000559423.5
ENST00000559883.5
ENST00000560119.5
CDS-3UTR GCA 90 bp ATCGGTTGCCCTCAGAGGACTAAATTCTATCAACTTGGCAGTTCCTTCTTCTGCTGCCTCCTCCTTCAGTaGCAATGTAACGCTCACTCT +
Preference number: 4 (lower is better)
Translates to: IGCPQRTKFYQLGSSFFCCLLLQ*QCNAHS
Trigger: AGAGTGAGCGTTACATTGGCACTGAAGGAGGAGGCA...GCAGAAGAAGGAACTGCCAAGTTGATAGAATTTAGTCCTCTGAGGGCAACCGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559423.5
ENST00000560119.5
CDS-3UTR GCA 90 bp GCCAGTTGGAGAGCGTACGTTTTCACAGGTTCTACAGCTATTAGCACATCTTGTTGCCTCCTCCTTCAGTaGCAATGTAACGCTCACTCT +
Preference number: 4 (lower is better)
Translates to: ASWRAYVFTGSTAISTSCCLLLQ*QCNAHS
Trigger: AGAGTGAGCGTTACATTGGCACTGAAGGAGGAGGCA...ACAAGATGTGCTAATAGCTGTAGAACCTGTGAAAACGTACGCTCTCCAACTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559883.5
CDS-3UTR GCA 90 bp TTTGCCTATACCCATAGGCTTTGCTCATCTGCAGTGTGCACTCCACAGCTTTTATGCCTCCTCCTTCAGTaGCAATGTAACGCTCACTCT +
Preference number: 4 (lower is better)
Translates to: FAYTHRLCSSAVCTPQLLCLLLQ*QCNAHS
Trigger: AGAGTGAGCGTTACATTGGCACTGAAGGAGGAGGCA...TAAAAGCTGTGGAGTGCACACTGCAGATGAGCAAAGCCTATGGGTATAGGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR GCA 90 bp GTGTTTGGACTCAGGATTTGGGTTCGGAGTTCCTCCAGGCTAATTCCCAGACACGAGTTTTACATCGGTTaGCCTCAGAGGACTAAATTC +
Preference number: 4 (lower is better)
Translates to: VFGLRIWVRSSSRLIPRHEFYIG*PQRTKF
Trigger: GAATTTAGTCCTCTGAGGGCAACCGATGTAAAACTC...GTGTCTGGGAATTAGCCTGGAGGAACTCCGAACCCAAATCCTGAGTCCAAACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560119.5
CDS-3UTR GCA 90 bp TGCCTCCTCCTTCAGTGCCAATGTAACGCTCACTCTTGGCACAGATTTCTGCAAGGCAATCACAAACACTaGTCCACTTGGGAGTTTTAC +
Preference number: 4 (lower is better)
Translates to: CLLLQCQCNAHSWHRFLQGNHKH*STWEFY
Trigger: GTAAAACTCCCAAGTGGAGCAGTGTTTGTGATTGCC...TTGCAGAAATCTGTGCCAAGAGTGAGCGTTACATTGGCACTGAAGGAGGAGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559423.5
ENST00000560119.5
CDS-3UTR GCA 90 bp GGCAATCACAAACACTGCTCCACTTGGGAGTTTTACATCGGTTGCCCTCAGAGGGAAATGGGAAGTTGCTaGCTTATTCATCTCCACACA +
Preference number: 4 (lower is better)
Translates to: GNHKHCSTWEFYIGCPQREMGSC*LIHLHT
Trigger: TGTGTGGAGATGAATAAGGCAGCAACTTCCCATTTC...CCTCTGAGGGCAACCGATGTAAAACTCCCAAGTGGAGCAGTGTTTGTGATTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559423.5
ENST00000560119.5
CDS-3UTR GCA 90 bp TGTGGGCCAAACTATATACATCTGCAGACCAGATGTGGCCCATGGGCTGCTGGGAGTACTTTGTCCCATTaGAAGCTTTTGTATTTAGCC +
Preference number: 4 (lower is better)
Translates to: CGPNYIHLQTRCGPWAAGSTLSH*KLLYLA
Trigger: GGCTAAATACAAAAGCTTGCAATGGGACAAAGTACT...CCCAGCAGCCCATGGGCCACATCTGGTCTGCAGATGTATATAGTTTGGCCCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR GCA 90 bp ATCTGGATGTTATTAGCACTAGTACTGAAGTCCCTTTTATGTTCAAACTGTGTGCCAGCTCGGGGCAGCTaGACTCATACATGTCCCGGC +
Preference number: 4 (lower is better)
Translates to: IWMLLALVLKSLLCSNCVPARGS*THTCPG
Trigger: GCCGGGACATGTATGAGTGCAGCTGCCCCGAGCTGG...CACACAGTTTGAACATAAAAGGGACTTCAGTACTAGTGCTAATAACATCCAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560119.5
CDS-3UTR CCA 90 bp ATCACAAACACTGCTCCACTTGGGAGTTTTACATCGGTTGCCCTCAGAGGACTAGAGGCCAGAACTTGGTaGGATATTTCCATCTACCAG +
Preference number: 4 (lower is better)
Translates to: ITNTAPLGSFTSVALRGLEARTW*DISIYQ
Trigger: CTGGTAGATGGAAATATCCCACCAAGTTCTGGCCTC...TAGTCCTCTGAGGGCAACCGATGTAAAACTCCCAAGTGGAGCAGTGTTTGTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559423.5
ENST00000560119.5
CDS-3UTR CCA 90 bp CTGAAGTCCGGATACAAGGGATTTGTATTGGCCAGTTGGAGAGCGTACGTTTTCGAGGCCAGAACTTGGTaGGATATTTCCATCTACCAG +
Preference number: 4 (lower is better)
Translates to: LKSGYKGFVLASWRAYVFEARTW*DISIYQ
Trigger: CTGGTAGATGGAAATATCCCACCAAGTTCTGGCCTC...GAAAACGTACGCTCTCCAACTGGCCAATACAAATCCCTTGTATCCGGACTTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558775.5
ENST00000559883.5
ENST00000559963.5
CDS-3UTR CCA 90 bp TCAATCTGGATGTTATTAGCACTAGTACTGAAGTCCCTCCTGCTGTGTGGCCCAGGAGAGGCCAGAACTTaGTGGGATATTTCCATCTAC +
Preference number: 4 (lower is better)
Translates to: SIWMLLALVLKSLLLCGPGEART*WDISIY
Trigger: GTAGATGGAAATATCCCACCAAGTTCTGGCCTCTCC...TGGGCCACACAGCAGGAGGGACTTCAGTACTAGTGCTAATAACATCCAGATTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559208.5
ENST00000559423.5
CDS-3UTR CCA 90 bp CGGATACAAGGGATTTGTATTGGCCAGTTGGAGAGCGTACGTTTTCACAGGTTCGGAGAGGCCAGAACTTaGTGGGATATTTCCATCTAC +
Preference number: 4 (lower is better)
Translates to: RIQGICIGQLESVRFHRFGEART*WDISIY
Trigger: GTAGATGGAAATATCCCACCAAGTTCTGGCCTCTCC...GAACCTGTGAAAACGTACGCTCTCCAACTGGCCAATACAAATCCCTTGTATCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558775.5
ENST00000559883.5
ENST00000559963.5
CDS-3UTR CCA 90 bp AGACTCCAAGCAAAGGCTACCAAGAAACCTCATGAAGTGAAACAGGACTTTGAGAACAGACCAAAGCACTaGAGCTGGAGAGGCCAGAAC +
Preference number: 4 (lower is better)
Translates to: RLQAKATKKPHEVKQDFENRPKH*SWRGQN
Trigger: GTTCTGGCCTCTCCAGCTCCAGTGCTTTGGTCTGTT...CTCAAAGTCCTGTTTCACTTCATGAGGTTTCTTGGTAGCCTTTGCTTGGAGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CCA 90 bp GAAGTTGCTGCCTTATTCATCTCCACACAACTGTTGGCAATCACAAACACTGCTAACAGACCAAAGCACTaGAGCTGGAGAGGCCAGAAC +
Preference number: 4 (lower is better)
Translates to: EVAALFISTQLLAITNTANRPKH*SWRGQN
Trigger: GTTCTGGCCTCTCCAGCTCCAGTGCTTTGGTCTGTT...AGCAGTGTTTGTGATTGCCAACAGTTGTGTGGAGATGAATAAGGCAGCAACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559423.5
ENST00000560119.5
CDS-3UTR CCA 90 bp AGTCCGGATACAAGGGATTTGTATTGGCCAGTTGGAGAGCGTACGTTTTCACAGCTGCAAGTTCCACCTTaGATAGATTCCTTCCCAGCA +
Preference number: 4 (lower is better)
Translates to: SPDTRDLYWPVGERTFSQLQVPP*IDSFPA
Trigger: TGCTGGGAAGGAATCTATCCAAGGTGGAACTTGCAG...CTGTGAAAACGTACGCTCTCCAACTGGCCAATACAAATCCCTTGTATCCGGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559883.5
CDS-3UTR CCA 90 bp GTCCATGCCTCCTCCTTCAGTGCCAATGTAACGCTCACTCTTGGCACAGATTTCTGTAACGCTCACTCTTaGCACAGATTTCTGCAAGTT +
Preference number: 4 (lower is better)
Translates to: VHASSFSANVTLTLGTDFCNAHS*HRFLQV
Trigger: AACTTGCAGAAATCTGTGCCAAGAGTGAGCGTTACA...GAAATCTGTGCCAAGAGTGAGCGTTACATTGGCACTGAAGGAGGAGGCATGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000559208.5
ENST00000559423.5
ENST00000559883.5
ENST00000560119.5
CDS-3UTR CCA 90 bp GTCCATGCCTCCTCCTTCAGTGCCAATGTAACGCTCACTCTTGGCACAGATTTCAGAAATGATATAGACTaGTCCATGCCTCCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: VHASSFSANVTLTLGTDFRNDID*SMPPPS
Trigger: TGAAGGAGGAGGCATGGACCAGTCTATATCATTTCT...GAAATCTGTGCCAAGAGTGAGCGTTACATTGGCACTGAAGGAGGAGGCATGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000559208.5
ENST00000559423.5
ENST00000560119.5
CDS-3UTR CCA 90 bp TTTGCCTATACCCATAGGCTTTGCTCATCTGCAGTGTGCACTCCACAGCTTTTAGCAGTGCTGCAGTCATaGCTCACTGTAGCTTTGAAG +
Preference number: 4 (lower is better)
Translates to: FAYTHRLCSSAVCTPQLLAVLQS*LTVALK
Trigger: CTTCAAAGCTACAGTGAGCCATGACTGCAGCACTGC...TAAAAGCTGTGGAGTGCACACTGCAGATGAGCAAAGCCTATGGGTATAGGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CCA 90 bp AATTTACTGTGGCACAGAAAGTCCTGCCAATTCCTAAGTGCCCTAAGTAGTTTCTTAGCTTCAGTAACCTaGACCCGACGCGTAGCAGGG +
Preference number: 4 (lower is better)
Translates to: NLLWHRKSCQFLSALSSFLASVT*TRRVAG
Trigger: CCCTGCTACGCGTCGGGTCCAGGTTACTGAAGCTAA...GAAACTACTTAGGGCACTTAGGAATTGGCAGGACTTTCTGTGCCACAGTAAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396509.6
ENST00000560119.5
CDS-3UTR CCA 90 bp GCCAGTTGGAGAGCGTACGTTTTCACAGGTTCTACAGCTATTAGCACATCTTGTCACTGCACTCTAGACTaGGCAACAAAGCAAGACTCC +
Preference number: 4 (lower is better)
Translates to: ASWRAYVFTGSTAISTSCHCTLD*ATKQDS
Trigger: GGAGTCTTGCTTTGTTGCCCAGTCTAGAGTGCAGTG...ACAAGATGTGCTAATAGCTGTAGAACCTGTGAAAACGTACGCTCTCCAACTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558775.5
ENST00000559963.5
CDS-3UTR TCA 90 bp TGGCCAGTTGGAGAGCGTACGTTTTCACAGGTTCTACAGCTATTAGCACATCTTGCTCTCCTATTATGTTaGCTCTTCCTGGTGCTCGAA +
Preference number: 4 (lower is better)
Translates to: WPVGERTFSQVLQLLAHLALLLC*LFLVLE
Trigger: TTCGAGCACCAGGAAGAGTCAACATAATAGGAGAGC...AAGATGTGCTAATAGCTGTAGAACCTGTGAAAACGTACGCTCTCCAACTGGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000559883.5
ENST00000559963.5
ENST00000561074.5
CDS-3UTR TCA 90 bp ATTATTTTCTTCCTCTTACAGTCGCACTATAGTAGTACTGGTCCAGAGTTTAATCAGATGTCCACCAGCTaGTCCAGCTCGGGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: IIFFLLQSHYSSTGPEFNQMSTS*SSSGQL
Trigger: CAGCTGCCCCGAGCTGGATCAGCTGGTGGACATCTG...ATTAAACTCTGGACCAGTACTACTATAGTGCGACTGTAAGAGGAAGAAAATAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558399.5
ENST00000559580.5
CDS-3UTR TCA 90 bp AATTTACTGTGGCACAGAAAGTCCTGCCAATTCCTAAGTGCCCTAAGTAGTTTCTGCTCCAGTAAGTCGTaGCCCTTGAGCCCCAAACTT +
Preference number: 4 (lower is better)
Translates to: NLLWHRKSCQFLSALSSFCSSKS*PLSPKL
Trigger: AAGTTTGGGGCTCAAGGGTCACGACTTACTGGAGCA...GAAACTACTTAGGGCACTTAGGAATTGGCAGGACTTTCTGTGCCACAGTAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327171.7
ENST00000396509.6
ENST00000544523.5
ENST00000559454.5
ENST00000560031.6
ENST00000560119.5
CDS-3UTR TCA 90 bp CTCTTACAGTCGCACTATAGTAGTACTGGTCCAGAGTTTAATCGTGTTCTCTTCTGCTCCAGTAAGTCGTaGCCCTTGAGCCCCAAACTT +
Preference number: 4 (lower is better)
Translates to: LLQSHYSSTGPEFNRVLFCSSKS*PLSPKL
Trigger: AAGTTTGGGGCTCAAGGGTCACGACTTACTGGAGCA...GAAGAGAACACGATTAAACTCTGGACCAGTACTACTATAGTGCGACTGTAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559580.5
CDS-3UTR TCA 90 bp TTTCATAAGCAATGTATGGTGGCACACCCAAATTACAGTGGCAGGAGAGGATACATCCCTCGCTTAGAATaGCCATGTGTGTCCCCCAAA +
Preference number: 4 (lower is better)
Translates to: FHKQCMVAHPNYSGRRGYIPRLE*PCVSPK
Trigger: TTTGGGGGACACACATGGTCATTCTAAGCGAGGGAT...GTATCCTCTCCTGCCACTGTAATTTGGGTGTGCCACCATACATTGCTTATGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR TCA 90 bp AGACTCCAAGCAAAGGCTACCAAGAAACCTCATGAAGTGAAACAGGACTTTGAGCTGATAAAGGGCAAGTaGCCTCAGCTGGTAAGTGGT +
Preference number: 4 (lower is better)
Translates to: RLQAKATKKPHEVKQDFELIKGK*PQLVSG
Trigger: ACCACTTACCAGCTGAGGTCACTTGCCCTTTATCAG...CTCAAAGTCCTGTTTCACTTCATGAGGTTTCTTGGTAGCCTTTGCTTGGAGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR TCA 90 bp TTTGCCTATACCCATAGGCTTTGCTCATCTGCAGTGTGCACTCCACAGCTTTTAAACAGCTGTGTTAGATaGATGGTCCCTGCCCTCAAT +
Preference number: 4 (lower is better)
Translates to: FAYTHRLCSSAVCTPQLLNSCVR*MVPALN
Trigger: ATTGAGGGCAGGGACCATTCATCTAACACAGCTGTT...TAAAAGCTGTGGAGTGCACACTGCAGATGAGCAAAGCCTATGGGTATAGGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR GCA 90 bp AGGCTTGGTTTTATCAATCTGGATGTTATTAGCACTAGTACTGAAGTCCGGATACTGGAAACTGCTCGATaGGAGCGCAGTTTCCGACGC +
Preference number: 4 (lower is better)
Translates to: RLGFINLDVISTSTEVRILETAR*ERSFRR
Trigger: GCGTCGGAAACTGCGCTCGCATCGAGCAGTTTCCAG...TATCCGGACTTCAGTACTAGTGCTAATAACATCCAGATTGATAAAACCAAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558775.5
ENST00000559883.5
ENST00000559963.5
CDS-3UTR GCA 90 bp CACATACCTGCATACCTGCTTTACAATGGGGTGCATATATACAAACAAGCTTTGCAGGAGGCTGGAAACTaGTCGATGCGAGCGCAGTTT +
Preference number: 4 (lower is better)
Translates to: HIPAYLLYNGVHIYKQALQEAGN*SMRAQF
Trigger: AAACTGCGCTCGCATCGAGCAGTTTCCAGCCTCCTG...CAAAGCTTGTTTGTATATATGCACCCCATTGTAAAGCAGGTATGCAGGTATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327171.7
CDS-3UTR GCA 90 bp TTGTATTGGCCAGTTGGAGAGCGTACGTTTTCACAGGTTCTACAGCTATTAGCATTCACCGGAATGAGATaGGTCCAGAGTCCCAAGCAA +
Preference number: 4 (lower is better)
Translates to: LYWPVGERTFSQVLQLLAFTGMR*VQSPKQ
Trigger: TTGCTTGGGACTCTGGACGCATCTCATTCCGGTGAA...TGCTAATAGCTGTAGAACCTGTGAAAACGTACGCTCTCCAACTGGCCAATACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558775.5
ENST00000559883.5
ENST00000559963.5
CDS-3UTR GCA 90 bp AGCACTAGTACTGAAGTCCGGATACAAGGGATTTGTATTGGCCAGTTGGAGAGCGTTGACTCTTCCTGGTaGTCGAACATAAAACTTGGG +
Preference number: 4 (lower is better)
Translates to: STSTEVRIQGICIGQLESVDSSW*SNIKLG
Trigger: CCCAAGTTTTATGTTCGAGCACCAGGAAGAGTCAAC...GCTCTCCAACTGGCCAATACAAATCCCTTGTATCCGGACTTCAGTACTAGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558775.5
ENST00000559883.5
ENST00000559963.5
CDS-3UTR GCA 90 bp TCCTTCAGTGCCAATGTAACGCTCACTCTTGGCACAGATTTCTGCAAGTTCCACGTTGACTCTTCCTGGTaGTCGAACATAAAACTTGGG +
Preference number: 4 (lower is better)
Translates to: SFSANVTLTLGTDFCKFHVDSSW*SNIKLG
Trigger: CCCAAGTTTTATGTTCGAGCACCAGGAAGAGTCAAC...GTGGAACTTGCAGAAATCTGTGCCAAGAGTGAGCGTTACATTGGCACTGAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000559208.5
ENST00000559423.5
ENST00000559883.5
ENST00000560119.5
CDS-3UTR GCA 90 bp AGAACTTGGTGGGATATTTCCATCTACCAGGCAGTTCATTCCAGTCAGGTTACTTGCCTCCTCCTTCAGTaGCAATGTAACGCTCACTCT +
Preference number: 4 (lower is better)
Translates to: RTWWDISIYQAVHSSQVTCLLLQ*QCNAHS
Trigger: AGAGTGAGCGTTACATTGGCACTGAAGGAGGAGGCA...AGTAACCTGACTGGAATGAACTGCCTGGTAGATGGAAATATCCCACCAAGTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000559208.5
ENST00000559423.5
ENST00000559883.5
ENST00000560119.5
CDS-3UTR GCA 90 bp AATTTACTGTGGCACAGAAAGTCCTGCCAATTCCTAAGTGCCCTAAGTAGTTTCATCCCTAGTTTAGCCTaGACCTCCTCCAGCCTCAGT +
Preference number: 4 (lower is better)
Translates to: NLLWHRKSCQFLSALSSFIPSLA*TSSSLS
Trigger: ACTGAGGCTGGAGGAGGTGCAGGCTAAACTAGGGAT...GAAACTACTTAGGGCACTTAGGAATTGGCAGGACTTTCTGTGCCACAGTAAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327171.7
ENST00000396509.6
ENST00000544523.5
ENST00000559454.5
ENST00000560031.6
ENST00000560119.5
CDS-3UTR GCA 90 bp GCAGGAGAGGATACATTCTTGTTACTTAATCATCTACATGCACATGTAAGAAAACCAGCTCGGGGCAGCTaGACTCATACATGTCCCGGC +
Preference number: 4 (lower is better)
Translates to: AGEDTFLLLNHLHAHVRKPARGS*THTCPG
Trigger: GCCGGGACATGTATGAGTGCAGCTGCCCCGAGCTGG...TTTTCTTACATGTGCATGTAGATGATTAAGTAACAAGAATGTATCCTCTCCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR GCA 90 bp AATTTACTGTGGCACAGAAAGTCCTGCCAATTCCTAAGTGCCCTAAGTAGTTTCGTACCATTGATACTGTaGAGCCTCCCCATCCTGCTC +
Preference number: 4 (lower is better)
Translates to: NLLWHRKSCQFLSALSSFVPLIL*SLPILL
Trigger: GAGCAGGATGGGGAGGCTGCACAGTATCAATGGTAC...GAAACTACTTAGGGCACTTAGGAATTGGCAGGACTTTCTGTGCCACAGTAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327171.7
ENST00000396509.6
ENST00000544523.5
ENST00000559454.5
ENST00000560031.6
ENST00000560119.5
CDS-3UTR GCA 90 bp TCCTCTTACAGTCGCACTATAGTAGTACTGGTCCAGAGTTTAATCGTGTTCTCTGTACCATTGATACTGTaGAGCCTCCCCATCCTGCTC +
Preference number: 4 (lower is better)
Translates to: SSYSRTIVVLVQSLIVFSVPLIL*SLPILL
Trigger: GAGCAGGATGGGGAGGCTGCACAGTATCAATGGTAC...AGAGAACACGATTAAACTCTGGACCAGTACTACTATAGTGCGACTGTAAGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559580.5
CDS-3UTR GCA 90 bp AATTTACTGTGGCACAGAAAGTCCTGCCAATTCCTAAGTGCCCTAAGTAGTTTCAGTGAGCCAAGATCGTaGCACTTGCACTCTAGCCTC +
Preference number: 4 (lower is better)
Translates to: NLLWHRKSCQFLSALSSFSEPRS*HLHSSL
Trigger: GAGGCTAGAGTGCAAGTGGCACGATCTTGGCTCACT...GAAACTACTTAGGGCACTTAGGAATTGGCAGGACTTTCTGTGCCACAGTAAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544523.5
CDS-3UTR CCA 90 bp CACATACCTGCATACCTGCTTTACAATGGGGTGCATATATACAAACAAGCTTTGCTTTACCCAGGAGGCTaGAAACTGCTCGATGCGAGC +
Preference number: 4 (lower is better)
Translates to: HIPAYLLYNGVHIYKQALLYPGG*KLLDAS
Trigger: GCTCGCATCGAGCAGTTTCCAGCCTCCTGGGTAAAG...CAAAGCTTGTTTGTATATATGCACCCCATTGTAAAGCAGGTATGCAGGTATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327171.7
CDS-3UTR CCA 90 bp TTCACAGGTTCTACAGCTATTAGCACATCTTGTTCTACAGCCATAGGAAGAACACTTTACCCAGGAGGCTaGAAACTGCTCGATGCGAGC +
Preference number: 4 (lower is better)
Translates to: FTGSTAISTSCSTAIGRTLYPGG*KLLDAS
Trigger: GCTCGCATCGAGCAGTTTCCAGCCTCCTGGGTAAAG...TGTTCTTCCTATGGCTGTAGAACAAGATGTGCTAATAGCTGTAGAACCTGTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558775.5
ENST00000559883.5
ENST00000559963.5
ENST00000561074.5
CDS-3UTR CCA 90 bp TGCCTCCTCCTTCAGTGCCAATGTAACGCTCACTCTTGGCACAGATTTCTGCAATTTGTATTGGCCAGTTaGAGAGCGTACGTTTTCACA +
Preference number: 4 (lower is better)
Translates to: CLLLQCQCNAHSWHRFLQFVLAS*RAYVFT
Trigger: TGTGAAAACGTACGCTCTCCAACTGGCCAATACAAA...TTGCAGAAATCTGTGCCAAGAGTGAGCGTTACATTGGCACTGAAGGAGGAGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000559208.5
ENST00000559423.5
ENST00000559883.5
ENST00000560119.5
CDS-3UTR CCA 90 bp GGGATTTGTATTGGCCAGTTGGAGAGCGTACGTTTTCACAGGTTCTACAGCTATACAAGGGATTTGTATTaGCCAGTTGGAGAGCGTACG +
Preference number: 4 (lower is better)
Translates to: GICIGQLESVRFHRFYSYTRDLY*PVGERT
Trigger: CGTACGCTCTCCAACTGGCCAATACAAATCCCTTGT...ATAGCTGTAGAACCTGTGAAAACGTACGCTCTCCAACTGGCCAATACAAATCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558775.5
ENST00000559883.5
ENST00000559963.5
CDS-3UTR CCA 90 bp TCCATCTACCAGGCAGTTCATTCCAGTCAGGTTACTAAGACCAAAGTGTTCCTGACAAGGGATTTGTATTaGCCAGTTGGAGAGCGTACG +
Preference number: 4 (lower is better)
Translates to: SIYQAVHSSQVTKTKVFLTRDLY*PVGERT
Trigger: CGTACGCTCTCCAACTGGCCAATACAAATCCCTTGT...CAGGAACACTTTGGTCTTAGTAACCTGACTGGAATGAACTGCCTGGTAGATGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558775.5
ENST00000559208.5
ENST00000559423.5
ENST00000559883.5
ENST00000559963.5
ENST00000560119.5
CDS-3UTR CCA 90 bp GTCCATGCCTCCTCCTTCAGTGCCAATGTAACGCTCACTCTTGGCACAGATTTCTGTGCCACAAAGGCTTaGTTTTATCAATCTGGATGT +
Preference number: 4 (lower is better)
Translates to: VHASSFSANVTLTLGTDFCATKA*FYQSGC
Trigger: ACATCCAGATTGATAAAACCAAGCCTTTGTGGCACA...GAAATCTGTGCCAAGAGTGAGCGTTACATTGGCACTGAAGGAGGAGGCATGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000559208.5
ENST00000559423.5
ENST00000559883.5
ENST00000560119.5
CDS-3UTR CCA 90 bp TTTGCCTATACCCATAGGCTTTGCTCATCTGCAGTGTGCACTCCACAGCTTTTAGAGGCCAGAACTTGGTaGGATATTTCCATCTACCAG +
Preference number: 4 (lower is better)
Translates to: FAYTHRLCSSAVCTPQLLEARTW*DISIYQ
Trigger: CTGGTAGATGGAAATATCCCACCAAGTTCTGGCCTC...TAAAAGCTGTGGAGTGCACACTGCAGATGAGCAAAGCCTATGGGTATAGGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CCA 90 bp ACTGAAGTCCGGATACAAGGGATTTGTATTGGCCAGTTGGAGAGCGTACGTTTTGAGGCCAGAACTTGGTaGGATATTTCCATCTACCAG +
Preference number: 4 (lower is better)
Translates to: TEVRIQGICIGQLESVRFEARTW*DISIYQ
Trigger: CTGGTAGATGGAAATATCCCACCAAGTTCTGGCCTC...AAAACGTACGCTCTCCAACTGGCCAATACAAATCCCTTGTATCCGGACTTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558775.5
ENST00000559883.5
ENST00000559963.5
CDS-3UTR CCA 90 bp TTCAGTGCCAATGTAACGCTCACTCTTGGCACAGATTTCTGCAAGTTCCACCTTGAGGCCAGAACTTGGTaGGATATTTCCATCTACCAG +
Preference number: 4 (lower is better)
Translates to: FSANVTLTLGTDFCKFHLEARTW*DISIYQ
Trigger: CTGGTAGATGGAAATATCCCACCAAGTTCTGGCCTC...AAGGTGGAACTTGCAGAAATCTGTGCCAAGAGTGAGCGTTACATTGGCACTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000559208.5
ENST00000559423.5
ENST00000559883.5
ENST00000560119.5
CDS-3UTR CCA 90 bp TCCGAAGCTGAAATTGAGAGAGAATGTGTGGCATCACTATCGTCATCATCATCAAACAGACCAAAGCACTaGAGCTGGAGAGGCCAGAAC +
Preference number: 4 (lower is better)
Translates to: SEAEIERECVASLSSSSSNRPKH*SWRGQN
Trigger: GTTCTGGCCTCTCCAGCTCCAGTGCTTTGGTCTGTT...TGATGATGATGACGATAGTGATGCCACACATTCTCTCTCAATTTCAGCTTCGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CCA 90 bp AATTTACTGTGGCACAGAAAGTCCTGCCAATTCCTAAGTGCCCTAAGTAGTTTCAACAGACCAAAGCACTaGAGCTGGAGAGGCCAGAAC +
Preference number: 4 (lower is better)
Translates to: NLLWHRKSCQFLSALSSFNRPKH*SWRGQN
Trigger: GTTCTGGCCTCTCCAGCTCCAGTGCTTTGGTCTGTT...GAAACTACTTAGGGCACTTAGGAATTGGCAGGACTTTCTGTGCCACAGTAAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327171.7
ENST00000396509.6
ENST00000544523.5
ENST00000559454.5
ENST00000560031.6
ENST00000560119.5
CDS-3UTR CCA 90 bp TTTGCCTATACCCATAGGCTTTGCTCATCTGCAGTGTGCACTCCACAGCTTTTACTGCAAGTTCCACCTTaGATAGATTCCTTCCCAGCA +
Preference number: 4 (lower is better)
Translates to: FAYTHRLCSSAVCTPQLLLQVPP*IDSFPA
Trigger: TGCTGGGAAGGAATCTATCCAAGGTGGAACTTGCAG...TAAAAGCTGTGGAGTGCACACTGCAGATGAGCAAAGCCTATGGGTATAGGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CCA 90 bp TTCAGTGCCAATGTAACGCTCACTCTTGGCACAGATTTCTGCAAGTTCCACCTTCTGCAAGTTCCACCTTaGATAGATTCCTTCCCAGCA +
Preference number: 4 (lower is better)
Translates to: FSANVTLTLGTDFCKFHLLQVPP*IDSFPA
Trigger: TGCTGGGAAGGAATCTATCCAAGGTGGAACTTGCAG...AAGGTGGAACTTGCAGAAATCTGTGCCAAGAGTGAGCGTTACATTGGCACTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000559208.5
ENST00000559423.5
ENST00000559883.5
ENST00000560119.5
CDS-3UTR CCA 90 bp GGCCAGAACTTGGTGGGATATTTCCATCTACCAGGCAGTTCATTCCAGTCAGGTTGTAACGCTCACTCTTaGCACAGATTTCTGCAAGTT +
Preference number: 4 (lower is better)
Translates to: GQNLVGYFHLPGSSFQSGCNAHS*HRFLQV
Trigger: AACTTGCAGAAATCTGTGCCAAGAGTGAGCGTTACA...ACCTGACTGGAATGAACTGCCTGGTAGATGGAAATATCCCACCAAGTTCTGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000559208.5
ENST00000559423.5
ENST00000559883.5
ENST00000560119.5
CDS-3UTR CCA 90 bp CAGATTTCTGCAAGTTCCACCTTGGATAGATTCCTTCCCAGCACTGTGAGCGTCAGAAATGATATAGACTaGTCCATGCCTCCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: QISASSTLDRFLPSTVSVRNDID*SMPPPS
Trigger: TGAAGGAGGAGGCATGGACCAGTCTATATCATTTCT...GACGCTCACAGTGCTGGGAAGGAATCTATCCAAGGTGGAACTTGCAGAAATCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000559208.5
ENST00000559423.5
ENST00000560119.5
CDS-3UTR CCA 90 bp AATTTACTGTGGCACAGAAAGTCCTGCCAATTCCTAAGTGCCCTAAGTAGTTTCCAGCTCATGTGGCTCTaGTTCATCAACTCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: NLLWHRKSCQFLSALSSFQLMWL*FINSPS
Trigger: GCTGGGAGAGTTGATGAACCAGAGCCACATGAGCTG...GAAACTACTTAGGGCACTTAGGAATTGGCAGGACTTTCTGTGCCACAGTAAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327171.7
ENST00000396509.6
ENST00000544523.5
ENST00000559454.5
ENST00000560031.6
ENST00000560119.5
CDS-3UTR CCA 90 bp GTAGTACTGGTCCAGAGTTTAATCGTGTTCTCTTCAATTTTGGAGGTCAGAGTCCAGCTCATGTGGCTCTaGTTCATCAACTCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: VVLVQSLIVFSSILEVRVQLMWL*FINSPS
Trigger: GCTGGGAGAGTTGATGAACCAGAGCCACATGAGCTG...GACTCTGACCTCCAAAATTGAAGAGAACACGATTAAACTCTGGACCAGTACTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558399.5
ENST00000559580.5
CDS-3UTR CCA 90 bp TCCTCTTACAGTCGCACTATAGTAGTACTGGTCCAGAGTTTAATCGTGTTCTCTCAGCTCATGTGGCTCTaGTTCATCAACTCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: SSYSRTIVVLVQSLIVFSQLMWL*FINSPS
Trigger: GCTGGGAGAGTTGATGAACCAGAGCCACATGAGCTG...AGAGAACACGATTAAACTCTGGACCAGTACTACTATAGTGCGACTGTAAGAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558399.5
ENST00000559580.5
CDS-3UTR CCA 90 bp TTTCAGCATGTCAAGGCTTCCATTCAAAAATCTAGAGCAATCCCATTGGCTGCTCAGCTCATGTGGCTCTaGTTCATCAACTCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: FQHVKASIQKSRAIPLAAQLMWL*FINSPS
Trigger: GCTGGGAGAGTTGATGAACCAGAGCCACATGAGCTG...AGCAGCCAATGGGATTGCTCTAGATTTTTGAATGGAAGCCTTGACATGCTGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CCA 90 bp TCCGAAGCTGAAATTGAGAGAGAATGTGTGGCATCACTATCGTCATCATCATCATCCCGGCAGCTCATGTaGCTCTGGTTCATCAACTCT +
Preference number: 4 (lower is better)
Translates to: SEAEIERECVASLSSSSSSRQLM*LWFINS
Trigger: AGAGTTGATGAACCAGAGCCACATGAGCTGCCGGGA...TGATGATGATGACGATAGTGATGCCACACATTCTCTCTCAATTTCAGCTTCGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CCA 90 bp AATTTACTGTGGCACAGAAAGTCCTGCCAATTCCTAAGTGCCCTAAGTAGTTTCTCCCGGCAGCTCATGTaGCTCTGGTTCATCAACTCT +
Preference number: 4 (lower is better)
Translates to: NLLWHRKSCQFLSALSSFSRQLM*LWFINS
Trigger: AGAGTTGATGAACCAGAGCCACATGAGCTGCCGGGA...GAAACTACTTAGGGCACTTAGGAATTGGCAGGACTTTCTGTGCCACAGTAAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327171.7
ENST00000396509.6
ENST00000544523.5
ENST00000559454.5
ENST00000560031.6
ENST00000560119.5
CDS-3UTR CCA 90 bp TGTGGGCCAAACTATATACATCTGCAGACCAGATGTGGCCCATGGGCTGCTGGGTCAACAAAATCATATTaGGTACCAACAGCTGTGTTA +
Preference number: 4 (lower is better)
Translates to: CGPNYIHLQTRCGPWAAGSTKSY*VPTAVL
Trigger: TAACACAGCTGTTGGTACCCAATATGATTTTGTTGA...CCCAGCAGCCCATGGGCCACATCTGGTCTGCAGATGTATATAGTTTGGCCCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CCA 90 bp TTCAGGTGCTTCTTCACATATCTTCTTAAACTGGAGCACTCGCGCAGCCTCGCTTTTGAGAGACTGAAGTaGGAGAATTGCTTGAACCTG +
Preference number: 4 (lower is better)
Translates to: FRCFFTYLLKLEHSRSLAFERLK*ENCLNL
Trigger: CAGGTTCAAGCAATTCTCCCACTTCAGTCTCTCAAA...AGCGAGGCTGCGCGAGTGCTCCAGTTTAAGAAGATATGTGAAGAAGCACCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560119.5
CDS-3UTR CCA 90 bp AGAGCGTACGTTTTCACAGGTTCTACAGCTATTAGCACATCTTGTTCTACAGCCCACTGCACTCTAGACTaGGCAACAAAGCAAGACTCC +
Preference number: 4 (lower is better)
Translates to: RAYVFTGSTAISTSCSTAHCTLD*ATKQDS
Trigger: GGAGTCTTGCTTTGTTGCCCAGTCTAGAGTGCAGTG...GGCTGTAGAACAAGATGTGCTAATAGCTGTAGAACCTGTGAAAACGTACGCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558775.5
ENST00000559963.5
3UTR CAA 72 bp GCACTAGTACTGAAGTCCGGATACAAGGGATTTGTATaGGCCAGTTGGAGAGCGTACGTTTTCACAGGTTCT +
Preference number: 4 (lower is better)
Translates to: ALVLKSGYKGFV*ASWRAYVFTGS
Trigger: AGAACCTGTGAAAACGTACGCTCTCCAACTGGCCAATACAAATCCCTTGTATCCGGACTTCAGTACTAGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558775.5
ENST00000559883.5
ENST00000559963.5
CDS-3UTR TCA 90 bp TTTCAGCATGTCAAGGCTTCCATTCAAAAATCTAGAGCAATCCCATTGGCTGCTTTACTTTCACCGGAATaGGATGCGTCCAGAGTCCCA +
Preference number: 4 (lower is better)
Translates to: FQHVKASIQKSRAIPLAALLSPE*DASRVP
Trigger: TGGGACTCTGGACGCATCTCATTCCGGTGAAAGTAA...AGCAGCCAATGGGATTGCTCTAGATTTTTGAATGGAAGCCTTGACATGCTGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327171.7
CDS-3UTR TCA 90 bp TTTCATAAGCAATGTATGGTGGCACACCCAAATTACAGTGGCAGGAGAGGATACGCTCTCCTATTATGTTaGCTCTTCCTGGTGCTCGAA +
Preference number: 4 (lower is better)
Translates to: FHKQCMVAHPNYSGRRGYALLLC*LFLVLE
Trigger: TTCGAGCACCAGGAAGAGTCAACATAATAGGAGAGC...GTATCCTCTCCTGCCACTGTAATTTGGGTGTGCCACCATACATTGCTTATGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR TCA 90 bp ATCTGGATGTTATTAGCACTAGTACTGAAGTCCCTTTTATGTTCAAACTGTGTGGTCCGCAGGTACCATTaGTACTGTGCAGCCTCCCCA +
Preference number: 4 (lower is better)
Translates to: IWMLLALVLKSLLCSNCVVRRYH*YCAASP
Trigger: TGGGGAGGCTGCACAGTATCAATGGTACCTGCGGAC...CACACAGTTTGAACATAAAAGGGACTTCAGTACTAGTGCTAATAACATCCAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560119.5
CDS-3UTR TCA 90 bp AATTTACTGTGGCACAGAAAGTCCTGCCAATTCCTAAGTGCCCTAAGTAGTTTCATCACGAGACTTCTGTaGCAGGAGCCGTTTTCTTCC +
Preference number: 4 (lower is better)
Translates to: NLLWHRKSCQFLSALSSFITRLL*QEPFSS
Trigger: GGAAGAAAACGGCTCCTGTCACAGAAGTCTCGTGAT...GAAACTACTTAGGGCACTTAGGAATTGGCAGGACTTTCTGTGCCACAGTAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396509.6
CDS-3UTR GCA 90 bp ATCTGGATGTTATTAGCACTAGTACTGAAGTCCGGATACAAGGGATTTGTATTGCAGGAGGCTGGAAACTaGTCGATGCGAGCGCAGTTT +
Preference number: 4 (lower is better)
Translates to: IWMLLALVLKSGYKGFVLQEAGN*SMRAQF
Trigger: AAACTGCGCTCGCATCGAGCAGTTTCCAGCCTCCTG...CAATACAAATCCCTTGTATCCGGACTTCAGTACTAGTGCTAATAACATCCAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000558775.5
ENST00000559883.5
ENST00000559963.5
CDS-3UTR GCA 90 bp ATCTTATTCTTCACTACATACCAAAGCAAAGCCTTCACTCTCACTGAGCCTCCTTTCACCGGAATGAGATaGGTCCAGAGTCCCAAGCAA +
Preference number: 4 (lower is better)
Translates to: ILFFTTYQSKAFTLTEPPFTGMR*VQSPKQ
Trigger: TTGCTTGGGACTCTGGACGCATCTCATTCCGGTGAA...AGGAGGCTCAGTGAGAGTGAAGGCTTTGCTTTGGTATGTAGTGAAGAATAAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327171.7
CDS-3UTR GCA 90 bp AGGGATTTGTATTGGCCAGTTGGAGAGCGTACGTTTTCACAGGTTCTACAGCTAGTTGACTCTTCCTGGTaGTCGAACATAAAACTTGGG +
Preference number: 4 (lower is better)
Translates to: RDLYWPVGERTFSQVLQLVDSSW*SNIKLG
Trigger: CCCAAGTTTTATGTTCGAGCACCAGGAAGAGTCAAC...TAGCTGTAGAACCTGTGAAAACGTACGCTCTCCAACTGGCCAATACAAATCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000558775.5
ENST00000559883.5
ENST00000559963.5
CDS-3UTR GCA 90 bp CCAGAACTTGGTGGGATATTTCCATCTACCAGGCAGTTCATTCCAGTCAGGTTAGTTGACTCTTCCTGGTaGTCGAACATAAAACTTGGG +
Preference number: 4 (lower is better)
Translates to: PELGGIFPSTRQFIPVRLVDSSW*SNIKLG
Trigger: CCCAAGTTTTATGTTCGAGCACCAGGAAGAGTCAAC...TAACCTGACTGGAATGAACTGCCTGGTAGATGGAAATATCCCACCAAGTTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558775.5
ENST00000559208.5
ENST00000559423.5
ENST00000559883.5
ENST00000559963.5
ENST00000560119.5
CDS-3UTR GCA 90 bp AATTTACTGTGGCACAGAAAGTCCTGCCAATTCCTAAGTGCCCTAAGTAGTTTCTGCCTCCTCCTTCAGTaGCAATGTAACGCTCACTCT +
Preference number: 4 (lower is better)
Translates to: NLLWHRKSCQFLSALSSFCLLLQ*QCNAHS
Trigger: AGAGTGAGCGTTACATTGGCACTGAAGGAGGAGGCA...GAAACTACTTAGGGCACTTAGGAATTGGCAGGACTTTCTGTGCCACAGTAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327171.7
ENST00000396509.6
ENST00000544523.5
ENST00000559454.5
ENST00000560031.6
ENST00000560119.5
CDS-3UTR GCA 90 bp CATCACCCTGATATTGAAATGGGAAGTTGCTGCCTTATTCATCTCCACACAACTTGCCTCCTCCTTCAGTaGCAATGTAACGCTCACTCT +
Preference number: 4 (lower is better)
Translates to: HHPDIEMGSCCLIHLHTTCLLLQ*QCNAHS
Trigger: AGAGTGAGCGTTACATTGGCACTGAAGGAGGAGGCA...AGTTGTGTGGAGATGAATAAGGCAGCAACTTCCCATTTCAATATCAGGGTGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559423.5
ENST00000560119.5
CDS-3UTR GCA 90 bp AGGCCAGAACTTGGTGGGATATTTCCATCTACCAGGCAGTTCATTCCAGTCAGGATTGAAATGGGAAGTTaGTGCCTTATTCATCTCCAC +
Preference number: 4 (lower is better)
Translates to: RPELGGIFPSTRQFIPVRIEMGS*CLIHLH
Trigger: GTGGAGATGAATAAGGCAGCAACTTCCCATTTCAAT...CCTGACTGGAATGAACTGCCTGGTAGATGGAAATATCCCACCAAGTTCTGGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559423.5
ENST00000560119.5
CDS-3UTR GCA 90 bp CACATACCTGCATACCTGCTTTACAATGGGGTGCATATATACAAACAAGCTTTGGTACCATTGATACTGTaGAGCCTCCCCATCCTGCTC +
Preference number: 4 (lower is better)
Translates to: HIPAYLLYNGVHIYKQALVPLIL*SLPILL
Trigger: GAGCAGGATGGGGAGGCTGCACAGTATCAATGGTAC...CAAAGCTTGTTTGTATATATGCACCCCATTGTAAAGCAGGTATGCAGGTATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR GCA 90 bp TTTGCCTATACCCATAGGCTTTGCTCATCTGCAGTGTGCACTCCACAGCTTTTATATACCCATAGGCTTTaGTCATCTGCAGTGTGCACT +
Preference number: 4 (lower is better)
Translates to: FAYTHRLCSSAVCTPQLLYTHRL*SSAVCT
Trigger: AGTGCACACTGCAGATGAGCAAAGCCTATGGGTATA...TAAAAGCTGTGGAGTGCACACTGCAGATGAGCAAAGCCTATGGGTATAGGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR GCA 90 bp ATCTACCAGGCAGTTCATTCCAGTCAGGTTACTAAGACCAAAGTGTTCCTGAATCTGAAGTGGGAGAATTaGTTGAACCTGGGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: IYQAVHSSQVTKTKVFLNLKWEN*LNLGGR
Trigger: TCTGCCTCCCAGGTTCAAGCAATTCTCCCACTTCAG...ATTCAGGAACACTTTGGTCTTAGTAACCTGACTGGAATGAACTGCCTGGTAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560119.5
CDS-3UTR CCA 90 bp AGGCTTGGTTTTATCAATCTGGATGTTATTAGCACTAGTACTGAAGTCCGGATACTTTACCCAGGAGGCTaGAAACTGCTCGATGCGAGC +
Preference number: 4 (lower is better)
Translates to: RLGFINLDVISTSTEVRILYPGG*KLLDAS
Trigger: GCTCGCATCGAGCAGTTTCCAGCCTCCTGGGTAAAG...TATCCGGACTTCAGTACTAGTGCTAATAACATCCAGATTGATAAAACCAAGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558775.5
ENST00000559883.5
ENST00000559963.5
CDS-3UTR CCA 90 bp TCTGCAAGTTCCACCTTGGATAGATTCCTTCCCAGCACTGTGAGCGTCACCAAGTATGTTGACTCTTCCTaGTGCTCGAACATAAAACTT +
Preference number: 4 (lower is better)
Translates to: SASSTLDRFLPSTVSVTKYVDSS*CSNIKL
Trigger: AAGTTTTATGTTCGAGCACCAGGAAGAGTCAACATA...CTTGGTGACGCTCACAGTGCTGGGAAGGAATCTATCCAAGGTGGAACTTGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000559208.5
ENST00000559423.5
ENST00000559883.5
ENST00000560119.5
CDS-3UTR CCA 90 bp AGTGCCAATGTAACGCTCACTCTTGGCACAGATTTCTGCAAGTTCCACCTTGGATTTGTATTGGCCAGTTaGAGAGCGTACGTTTTCACA +
Preference number: 4 (lower is better)
Translates to: SANVTLTLGTDFCKFHLGFVLAS*RAYVFT
Trigger: TGTGAAAACGTACGCTCTCCAACTGGCCAATACAAA...TCCAAGGTGGAACTTGCAGAAATCTGTGCCAAGAGTGAGCGTTACATTGGCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000559208.5
ENST00000559423.5
ENST00000559883.5
ENST00000560119.5
CDS-3UTR CCA 90 bp GCCAGAACTTGGTGGGATATTTCCATCTACCAGGCAGTTCATTCCAGTCAGGTTTTTGTATTGGCCAGTTaGAGAGCGTACGTTTTCACA +
Preference number: 4 (lower is better)
Translates to: ARTWWDISIYQAVHSSQVFVLAS*RAYVFT
Trigger: TGTGAAAACGTACGCTCTCCAACTGGCCAATACAAA...AACCTGACTGGAATGAACTGCCTGGTAGATGGAAATATCCCACCAAGTTCTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000558775.5
ENST00000559208.5
ENST00000559423.5
ENST00000559883.5
ENST00000559963.5
ENST00000560119.5
CDS-3UTR CCA 90 bp ACTTGGTGGGATATTTCCATCTACCAGGCAGTTCATTCCAGTCAGGTTACTAAGACAAGGGATTTGTATTaGCCAGTTGGAGAGCGTACG +
Preference number: 4 (lower is better)
Translates to: TWWDISIYQAVHSSQVTKTRDLY*PVGERT
Trigger: CGTACGCTCTCCAACTGGCCAATACAAATCCCTTGT...CTTAGTAACCTGACTGGAATGAACTGCCTGGTAGATGGAAATATCCCACCAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558775.5
ENST00000559208.5
ENST00000559423.5
ENST00000559883.5
ENST00000559963.5
ENST00000560119.5
CDS-3UTR CCA 90 bp AACTCTCCCAGCAGCTGGACCATGTTTTCAGGTGCTTCTTCACATATCTTCTTACTGCAAGTTCCACCTTaGATAGATTCCTTCCCAGCA +
Preference number: 4 (lower is better)
Translates to: NSPSSWTMFSGASSHIFLLQVPP*IDSFPA
Trigger: TGCTGGGAAGGAATCTATCCAAGGTGGAACTTGCAG...TAAGAAGATATGTGAAGAAGCACCTGAAAACATGGTCCAGCTGCTGGGAGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560119.5
CDS-3UTR CCA 90 bp ACCTCCTCCAGCCTCAGTACTTTGTCCCATTGCAAGCTTTTGTATTTAGCCAGGTGTAACGCTCACTCTTaGCACAGATTTCTGCAAGTT +
Preference number: 4 (lower is better)
Translates to: TSSSLSTLSHCKLLYLARCNAHS*HRFLQV
Trigger: AACTTGCAGAAATCTGTGCCAAGAGTGAGCGTTACA...CCTGGCTAAATACAAAAGCTTGCAATGGGACAAAGTACTGAGGCTGGAGGAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560119.5
CDS-3UTR CCA 90 bp GCTGCCTTATTCATCTCCACACAACTGTTGGCAATCACAAACACTGCTCCACTTAAACACTGCTCCACTTaGGAGTTTTACATCGGTTGC +
Preference number: 4 (lower is better)
Translates to: AALFISTQLLAITNTAPLKHCST*EFYIGC
Trigger: GCAACCGATGTAAAACTCCCAAGTGGAGCAGTGTTT...AAGTGGAGCAGTGTTTGTGATTGCCAACAGTTGTGTGGAGATGAATAAGGCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559423.5
ENST00000560119.5
CDS-3UTR CCA 90 bp TGGTGGGATATTTCCATCTACCAGGCAGTTCATTCCAGTCAGGTTACTAAGACCTCTCCACACAACTGTTaGCAATCACAAACACTGCTC +
Preference number: 4 (lower is better)
Translates to: WWDISIYQAVHSSQVTKTSPHNC*QSQTLL
Trigger: GAGCAGTGTTTGTGATTGCCAACAGTTGTGTGGAGA...GGTCTTAGTAACCTGACTGGAATGAACTGCCTGGTAGATGGAAATATCCCACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559423.5
ENST00000560119.5
CDS-3UTR CCA 90 bp ATCTTATTCTTCACTACATACCAAAGCAAAGCCTTCACTCTCACTGAGCCTCCTTTTGGACTCAGGATTTaGGTTCGGAGTTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: ILFFTTYQSKAFTLTEPPFGLRI*VRSSSR
Trigger: CCTGGAGGAACTCCGAACCCAAATCCTGAGTCCAAA...AGGAGGCTCAGTGAGAGTGAAGGCTTTGCTTTGGTATGTAGTGAAGAATAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CCA 90 bp AATTTACTGTGGCACAGAAAGTCCTGCCAATTCCTAAGTGCCCTAAGTAGTTTCTTTGGACTCAGGATTTaGGTTCGGAGTTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: NLLWHRKSCQFLSALSSFFGLRI*VRSSSR
Trigger: CCTGGAGGAACTCCGAACCCAAATCCTGAGTCCAAA...GAAACTACTTAGGGCACTTAGGAATTGGCAGGACTTTCTGTGCCACAGTAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327171.7
ENST00000396509.6
ENST00000544523.5
ENST00000559454.5
ENST00000560031.6
ENST00000560119.5
CDS-3UTR CCA 90 bp ACTGGTCCAGAGTTTAATCGTGTTCTCTTCAATTTTGGAGGTCAGAGTCCATTGTTTGGACTCAGGATTTaGGTTCGGAGTTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: TGPEFNRVLFNFGGQSPLFGLRI*VRSSSR
Trigger: CCTGGAGGAACTCCGAACCCAAATCCTGAGTCCAAA...CAATGGACTCTGACCTCCAAAATTGAAGAGAACACGATTAAACTCTGGACCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558399.5
ENST00000559580.5
CDS-3UTR CCA 90 bp TTTCAGCATGTCAAGGCTTCCATTCAAAAATCTAGAGCAATCCCATTGGCTGCTCATATCTTCTTAAACTaGAGCACTCGCGCAGCCTCG +
Preference number: 4 (lower is better)
Translates to: FQHVKASIQKSRAIPLAAHIFLN*STRAAS
Trigger: CGAGGCTGCGCGAGTGCTCCAGTTTAAGAAGATATG...AGCAGCCAATGGGATTGCTCTAGATTTTTGAATGGAAGCCTTGACATGCTGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CCA 90 bp AATTTACTGTGGCACAGAAAGTCCTGCCAATTCCTAAGTGCCCTAAGTAGTTTCCATATCTTCTTAAACTaGAGCACTCGCGCAGCCTCG +
Preference number: 4 (lower is better)
Translates to: NLLWHRKSCQFLSALSSFHIFLN*STRAAS
Trigger: CGAGGCTGCGCGAGTGCTCCAGTTTAAGAAGATATG...GAAACTACTTAGGGCACTTAGGAATTGGCAGGACTTTCTGTGCCACAGTAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327171.7
ENST00000396509.6
ENST00000544523.5
ENST00000559454.5
ENST00000560031.6
ENST00000560119.5
CDS-3UTR CCA 90 bp TCCGAAGCTGAAATTGAGAGAGAATGTGTGGCATCACTATCGTCATCATCATCAAACTCTCCCAGCAGCTaGACCATGTTTTCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: SEAEIERECVASLSSSSSNSPSS*TMFSGA
Trigger: AGCACCTGAAAACATGGTCCAGCTGCTGGGAGAGTT...TGATGATGATGACGATAGTGATGCCACACATTCTCTCTCAATTTCAGCTTCGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CCA 90 bp AATTTACTGTGGCACAGAAAGTCCTGCCAATTCCTAAGTGCCCTAAGTAGTTTCAACTCTCCCAGCAGCTaGACCATGTTTTCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: NLLWHRKSCQFLSALSSFNSPSS*TMFSGA
Trigger: AGCACCTGAAAACATGGTCCAGCTGCTGGGAGAGTT...GAAACTACTTAGGGCACTTAGGAATTGGCAGGACTTTCTGTGCCACAGTAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327171.7
ENST00000396509.6
ENST00000544523.5
ENST00000559454.5
ENST00000560031.6
ENST00000560119.5
CDS-3UTR CCA 90 bp TCCTCTTACAGTCGCACTATAGTAGTACTGGTCCAGAGTTTAATCGTGTTCTCTAACTCTCCCAGCAGCTaGACCATGTTTTCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: SSYSRTIVVLVQSLIVFSNSPSS*TMFSGA
Trigger: AGCACCTGAAAACATGGTCCAGCTGCTGGGAGAGTT...AGAGAACACGATTAAACTCTGGACCAGTACTACTATAGTGCGACTGTAAGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558399.5
ENST00000559580.5
CDS-3UTR CCA 90 bp GTAGTACTGGTCCAGAGTTTAATCGTGTTCTCTTCAATTTTGGAGGTCAGAGTCAACTCTCCCAGCAGCTaGACCATGTTTTCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: VVLVQSLIVFSSILEVRVNSPSS*TMFSGA
Trigger: AGCACCTGAAAACATGGTCCAGCTGCTGGGAGAGTT...GACTCTGACCTCCAAAATTGAAGAGAACACGATTAAACTCTGGACCAGTACTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558399.5
ENST00000559580.5
CDS-3UTR CCA 90 bp AATTTACTGTGGCACAGAAAGTCCTGCCAATTCCTAAGTGCCCTAAGTAGTTTCCATTTGCTAGAAAGCTaGGCAGCTTGTCCGCAGGTA +
Preference number: 4 (lower is better)
Translates to: NLLWHRKSCQFLSALSSFHLLES*AACPQV
Trigger: TACCTGCGGACAAGCTGCCCAGCTTTCTAGCAAATG...GAAACTACTTAGGGCACTTAGGAATTGGCAGGACTTTCTGTGCCACAGTAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327171.7
ENST00000396509.6
ENST00000544523.5
ENST00000559454.5
ENST00000560031.6
ENST00000560119.5
CDS-3UTR CCA 90 bp TTTCAGCATGTCAAGGCTTCCATTCAAAAATCTAGAGCAATCCCATTGGCTGCTCATTTGCTAGAAAGCTaGGCAGCTTGTCCGCAGGTA +
Preference number: 4 (lower is better)
Translates to: FQHVKASIQKSRAIPLAAHLLES*AACPQV
Trigger: TACCTGCGGACAAGCTGCCCAGCTTTCTAGCAAATG...AGCAGCCAATGGGATTGCTCTAGATTTTTGAATGGAAGCCTTGACATGCTGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CCA 90 bp AAAGGCTTGGTTTTATCAATCTGGATGTTATTAGCACTAGTACTGAAGTCCCTCTTAGCTTCAGTAACCTaGACCCGACGCGTAGCAGGG +
Preference number: 4 (lower is better)
Translates to: KGLVLSIWMLLALVLKSLLASVT*TRRVAG
Trigger: CCCTGCTACGCGTCGGGTCCAGGTTACTGAAGCTAA...GAGGGACTTCAGTACTAGTGCTAATAACATCCAGATTGATAAAACCAAGCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558956.5
ENST00000559423.5
CDS-3UTR CCA 90 bp TGGTGGGATATTTCCATCTACCAGGCAGTTCATTCCAGTCAGGTTACTAAGACCGTCATCTTGAGTGTTTaGACTCAGGATTTGGGTTCG +
Preference number: 4 (lower is better)
Translates to: WWDISIYQAVHSSQVTKTVILSV*TQDLGS
Trigger: CGAACCCAAATCCTGAGTCCAAACACTCAAGATGAC...GGTCTTAGTAACCTGACTGGAATGAACTGCCTGGTAGATGGAAATATCCCACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560119.5
3UTR CAA 72 bp TGGGAAGTTGCTGCCTTATTCATCTCCACACAACTGTaGGCAATCACAAACACTGCTCCACTTGGGAGTTTT +
Preference number: 4 (lower is better)
Translates to: WEVAALFISTQL*AITNTAPLGSF
Trigger: AAAACTCCCAAGTGGAGCAGTGTTTGTGATTGCCAACAGTTGTGTGGAGATGAATAAGGCAGCAACTTCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559423.5
ENST00000560119.5
3UTR CAA 72 bp ACTGAAGTCCGGATACAAGGGATTTGTATTGGCCAGTaGGAGAGCGTACGTTTTCACAGGTTCTACAGCTAT +
Preference number: 4 (lower is better)
Translates to: TEVRIQGICIGQ*ESVRFHRFYSY
Trigger: ATAGCTGTAGAACCTGTGAAAACGTACGCTCTCCAACTGGCCAATACAAATCCCTTGTATCCGGACTTCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558775.5
ENST00000559883.5
ENST00000559963.5
CDS-3UTR TCA 90 bp TTCACAGGTTCTACAGCTATTAGCACATCTTGTTCTACAGCCATAGGAAGAACATTACTTTCACCGGAATaGGATGCGTCCAGAGTCCCA +
Preference number: 4 (lower is better)
Translates to: FTGSTAISTSCSTAIGRTLLSPE*DASRVP
Trigger: TGGGACTCTGGACGCATCTCATTCCGGTGAAAGTAA...TGTTCTTCCTATGGCTGTAGAACAAGATGTGCTAATAGCTGTAGAACCTGTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558775.5
ENST00000559883.5
ENST00000559963.5
ENST00000561074.5
CDS-3UTR TCA 90 bp AATTTACTGTGGCACAGAAAGTCCTGCCAATTCCTAAGTGCCCTAAGTAGTTTCGCTCTCCTATTATGTTaGCTCTTCCTGGTGCTCGAA +
Preference number: 4 (lower is better)
Translates to: NLLWHRKSCQFLSALSSFALLLC*LFLVLE
Trigger: TTCGAGCACCAGGAAGAGTCAACATAATAGGAGAGC...GAAACTACTTAGGGCACTTAGGAATTGGCAGGACTTTCTGTGCCACAGTAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327171.7
ENST00000396509.6
ENST00000544523.5
ENST00000559454.5
ENST00000560031.6
ENST00000560119.5
CDS-3UTR TCA 90 bp ATTATTTTCTTCCTCTTACAGTCGCACTATAGTAGTACTGGTCCAGAGTTTAATGTCCGCAGGTACCATTaGTACTGTGCAGCCTCCCCA +
Preference number: 4 (lower is better)
Translates to: IIFFLLQSHYSSTGPEFNVRRYH*YCAASP
Trigger: TGGGGAGGCTGCACAGTATCAATGGTACCTGCGGAC...ATTAAACTCTGGACCAGTACTACTATAGTGCGACTGTAAGAGGAAGAAAATAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559580.5
CDS-3UTR TCA 90 bp GCCAGAACTTGGTGGGATATTTCCATCTACCAGGCAGTTCATTCCAGTCAGGTTAGATCTGTCCAAGCATaGTCTTGGCTCTTAATAGTA +
Preference number: 4 (lower is better)
Translates to: ARTWWDISIYQAVHSSQVRSVQA*SWLLIV
Trigger: TACTATTAAGAGCCAAGATCATGCTTGGACAGATCT...AACCTGACTGGAATGAACTGCCTGGTAGATGGAAATATCCCACCAAGTTCTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560119.5
CDS-3UTR TCA 90 bp TTTGCCTATACCCATAGGCTTTGCTCATCTGCAGTGTGCACTCCACAGCTTTTAAGTGTACAATATGTCTaGATGCTGGACAATTGGAGG +
Preference number: 4 (lower is better)
Translates to: FAYTHRLCSSAVCTPQLLSVQYV*MLDNWR
Trigger: CCTCCAATTGTCCAGCATTCAGACATATTGTACACT...TAAAAGCTGTGGAGTGCACACTGCAGATGAGCAAAGCCTATGGGTATAGGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR TCA 90 bp AGACTCCAAGCAAAGGCTACCAAGAAACCTCATGAAGTGAAACAGGACTTTGAGCCCATTTCCAGCTTCTaGCCAGGAACAGTTTATGTA +
Preference number: 4 (lower is better)
Translates to: RLQAKATKKPHEVKQDFEPISSF*PGTVYV
Trigger: TACATAAACTGTTCCTGGTCAGAAGCTGGAAATGGG...CTCAAAGTCCTGTTTCACTTCATGAGGTTTCTTGGTAGCCTTTGCTTGGAGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR TCA 90 bp AGTTTTACATCGGTTGCCCTCAGAGGACTAAATTCTATCAACTTGGCAGTTCCTACGACTCCGTCATCTTaGGTGTTTGGACTCAGGATT +
Preference number: 4 (lower is better)
Translates to: SFTSVALRGLNSINLAVPTTPSS*VFGLRI
Trigger: AATCCTGAGTCCAAACACTCAAGATGACGGAGTCGT...AGGAACTGCCAAGTTGATAGAATTTAGTCCTCTGAGGGCAACCGATGTAAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560119.5
CDS-3UTR GCA 90 bp ACAATAATCTATATGCTCTCCTATTATGTTGACTCTTCCTGGTGCTCGAACATACAGGAGGCTGGAAACTaGTCGATGCGAGCGCAGTTT +
Preference number: 4 (lower is better)
Translates to: TIIYMLSYYVDSSWCSNIQEAGN*SMRAQF
Trigger: AAACTGCGCTCGCATCGAGCAGTTTCCAGCCTCCTG...TATGTTCGAGCACCAGGAAGAGTCAACATAATAGGAGAGCATATAGATTATTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000559883.5
ENST00000559963.5
ENST00000561074.5
CDS-3UTR GCA 90 bp CTCTCCTATTATGTTGACTCTTCCTGGTGCTCGAACATAAAACTTGGGAATAGATTCACCGGAATGAGATaGGTCCAGAGTCCCAAGCAA +
Preference number: 4 (lower is better)
Translates to: LSYYVDSSWCSNIKLGNRFTGMR*VQSPKQ
Trigger: TTGCTTGGGACTCTGGACGCATCTCATTCCGGTGAA...TCTATTCCCAAGTTTTATGTTCGAGCACCAGGAAGAGTCAACATAATAGGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000559883.5
ENST00000559963.5
ENST00000561074.5
CDS-3UTR GCA 90 bp AGACTCCAAGCAAAGGCTACCAAGAAACCTCATGAAGTGAAACAGGACTTTGAGGTTGACTCTTCCTGGTaGTCGAACATAAAACTTGGG +
Preference number: 4 (lower is better)
Translates to: RLQAKATKKPHEVKQDFEVDSSW*SNIKLG
Trigger: CCCAAGTTTTATGTTCGAGCACCAGGAAGAGTCAAC...CTCAAAGTCCTGTTTCACTTCATGAGGTTTCTTGGTAGCCTTTGCTTGGAGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR GCA 90 bp AGAGCGTACGTTTTCACAGGTTCTACAGCTATTAGCACATCTTGTTCTACAGCCGTTGACTCTTCCTGGTaGTCGAACATAAAACTTGGG +
Preference number: 4 (lower is better)
Translates to: RAYVFTGSTAISTSCSTAVDSSW*SNIKLG
Trigger: CCCAAGTTTTATGTTCGAGCACCAGGAAGAGTCAAC...GGCTGTAGAACAAGATGTGCTAATAGCTGTAGAACCTGTGAAAACGTACGCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000558775.5
ENST00000559883.5
ENST00000559963.5
ENST00000561074.5
CDS-3UTR GCA 90 bp ATGCCCTGTAGAAATGTTGGACAAGTAGTATCAGATATTCCACCACTCAGTAATATCCCTAGTTTAGCCTaGACCTCCTCCAGCCTCAGT +
Preference number: 4 (lower is better)
Translates to: MPCRNVGQVVSDIPPLSNIPSLA*TSSSLS
Trigger: ACTGAGGCTGGAGGAGGTGCAGGCTAAACTAGGGAT...ATTACTGAGTGGTGGAATATCTGATACTACTTGTCCAACATTTCTACAGGGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR GCA 90 bp AGTCGCACTATAGTAGTACTGGTCCAGAGTTTAATCGTGTTCTCTTCAATTTTGATCCCTAGTTTAGCCTaGACCTCCTCCAGCCTCAGT +
Preference number: 4 (lower is better)
Translates to: SRTIVVLVQSLIVFSSILIPSLA*TSSSLS
Trigger: ACTGAGGCTGGAGGAGGTGCAGGCTAAACTAGGGAT...CAAAATTGAAGAGAACACGATTAAACTCTGGACCAGTACTACTATAGTGCGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558399.5
CDS-3UTR GCA 90 bp AGACTCCAAGCAAAGGCTACCAAGAAACCTCATGAAGTGAAACAGGACTTTGAGGCTGTACACATGCTTTaGCCGCTGATAGAGTTTGAA +
Preference number: 4 (lower is better)
Translates to: RLQAKATKKPHEVKQDFEAVHML*PLIEFE
Trigger: TTCAAACTCTATCAGCGGGCAAAGCATGTGTACAGC...CTCAAAGTCCTGTTTCACTTCATGAGGTTTCTTGGTAGCCTTTGCTTGGAGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR GCA 90 bp CCAGAACTTGGTGGGATATTTCCATCTACCAGGCAGTTCATTCCAGTCAGGTTAGTAGCAAACAAACTTTaGTTCTCCGGTGCTAAGCTT +
Preference number: 4 (lower is better)
Translates to: PELGGIFPSTRQFIPVRLVANKL*FSGAKL
Trigger: AAGCTTAGCACCGGAGAAGCAAAGTTTGTTTGCTAC...TAACCTGACTGGAATGAACTGCCTGGTAGATGGAAATATCCCACCAAGTTCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560119.5
CDS-3UTR GCA 90 bp CAAGCAAAGGCTACCAAGAAACCTCATGAAGTGAAACAGGACTTTGAGAAGTTCTGGCACAGAAAGTCCTaGCAATTCCTAAGTGCCCTA +
Preference number: 4 (lower is better)
Translates to: QAKATKKPHEVKQDFEKFWHRKS*QFLSAL
Trigger: TAGGGCACTTAGGAATTGGCAGGACTTTCTGTGCCA...GAACTTCTCAAAGTCCTGTTTCACTTCATGAGGTTTCTTGGTAGCCTTTGCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR GCA 90 bp AATTTACTGTGGCACAGAAAGTCCTGCCAATTCCTAAGTGCCCTAAGTAGTTTCTGGCACAGAAAGTCCTaGCAATTCCTAAGTGCCCTA +
Preference number: 4 (lower is better)
Translates to: NLLWHRKSCQFLSALSSFWHRKS*QFLSAL
Trigger: TAGGGCACTTAGGAATTGGCAGGACTTTCTGTGCCA...GAAACTACTTAGGGCACTTAGGAATTGGCAGGACTTTCTGTGCCACAGTAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327171.7
ENST00000396509.6
ENST00000544523.5
ENST00000559454.5
ENST00000560031.6
ENST00000560119.5
CDS-3UTR GCA 90 bp AGACTCCAAGCAAAGGCTACCAAGAAACCTCATGAAGTGAAACAGGACTTTGAGTATACCCATAGGCTTTaGTCATCTGCAGTGTGCACT +
Preference number: 4 (lower is better)
Translates to: RLQAKATKKPHEVKQDFEYTHRL*SSAVCT
Trigger: AGTGCACACTGCAGATGAGCAAAGCCTATGGGTATA...CTCAAAGTCCTGTTTCACTTCATGAGGTTTCTTGGTAGCCTTTGCTTGGAGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR GCA 90 bp GCAGGAGAGGATACATTCTTGTTACTTAATCATCTACATGCACATGTAAGAAAATCTCCCAGGCTGGAGTaGAGTGCTGCAGTCATGGCT +
Preference number: 4 (lower is better)
Translates to: AGEDTFLLLNHLHAHVRKSPRLE*SAAVMA
Trigger: AGCCATGACTGCAGCACTGCACTCCAGCCTGGGAGA...TTTTCTTACATGTGCATGTAGATGATTAAGTAACAAGAATGTATCCTCTCCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CCA 90 bp ACTGAAGTCCGGATACAAGGGATTTGTATTGGCCAGTTGGAGAGCGTACGTTTTTTTGTATTGGCCAGTTaGAGAGCGTACGTTTTCACA +
Preference number: 4 (lower is better)
Translates to: TEVRIQGICIGQLESVRFFVLAS*RAYVFT
Trigger: TGTGAAAACGTACGCTCTCCAACTGGCCAATACAAA...AAAACGTACGCTCTCCAACTGGCCAATACAAATCCCTTGTATCCGGACTTCAGT
44% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000558775.5
ENST00000559883.5
ENST00000559963.5
CDS-3UTR CCA 90 bp GGGATTTGTATTGGCCAGTTGGAGAGCGTACGTTTTCACAGGTTCTACAGCTATTTTGTATTGGCCAGTTaGAGAGCGTACGTTTTCACA +
Preference number: 4 (lower is better)
Translates to: GICIGQLESVRFHRFYSYFVLAS*RAYVFT
Trigger: TGTGAAAACGTACGCTCTCCAACTGGCCAATACAAA...ATAGCTGTAGAACCTGTGAAAACGTACGCTCTCCAACTGGCCAATACAAATCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000558775.5
ENST00000559883.5
ENST00000559963.5
CDS-3UTR CCA 90 bp CAAGCAAAGGCTACCAAGAAACCTCATGAAGTGAAACAGGACTTTGAGAAGTTCACAAGGGATTTGTATTaGCCAGTTGGAGAGCGTACG +
Preference number: 4 (lower is better)
Translates to: QAKATKKPHEVKQDFEKFTRDLY*PVGERT
Trigger: CGTACGCTCTCCAACTGGCCAATACAAATCCCTTGT...GAACTTCTCAAAGTCCTGTTTCACTTCATGAGGTTTCTTGGTAGCCTTTGCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CCA 90 bp AATTTACTGTGGCACAGAAAGTCCTGCCAATTCCTAAGTGCCCTAAGTAGTTTCACAAGGGATTTGTATTaGCCAGTTGGAGAGCGTACG +
Preference number: 4 (lower is better)
Translates to: NLLWHRKSCQFLSALSSFTRDLY*PVGERT
Trigger: CGTACGCTCTCCAACTGGCCAATACAAATCCCTTGT...GAAACTACTTAGGGCACTTAGGAATTGGCAGGACTTTCTGTGCCACAGTAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327171.7
ENST00000396509.6
ENST00000544523.5
ENST00000559454.5
ENST00000560031.6
ENST00000560119.5
CDS-3UTR CCA 90 bp TTTCAGCATGTCAAGGCTTCCATTCAAAAATCTAGAGCAATCCCATTGGCTGCTACAAGGGATTTGTATTaGCCAGTTGGAGAGCGTACG +
Preference number: 4 (lower is better)
Translates to: FQHVKASIQKSRAIPLAATRDLY*PVGERT
Trigger: CGTACGCTCTCCAACTGGCCAATACAAATCCCTTGT...AGCAGCCAATGGGATTGCTCTAGATTTTTGAATGGAAGCCTTGACATGCTGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CCA 90 bp AATTTACTGTGGCACAGAAAGTCCTGCCAATTCCTAAGTGCCCTAAGTAGTTTCGAGGCCAGAACTTGGTaGGATATTTCCATCTACCAG +
Preference number: 4 (lower is better)
Translates to: NLLWHRKSCQFLSALSSFEARTW*DISIYQ
Trigger: CTGGTAGATGGAAATATCCCACCAAGTTCTGGCCTC...GAAACTACTTAGGGCACTTAGGAATTGGCAGGACTTTCTGTGCCACAGTAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327171.7
ENST00000396509.6
ENST00000544523.5
ENST00000559454.5
ENST00000560031.6
ENST00000560119.5
CDS-3UTR CCA 90 bp TATGGTGGCACACCCAAATTACAGTGGCAGGAGAGGATACATTCTTGTTACTTAGAGGCCAGAACTTGGTaGGATATTTCCATCTACCAG +
Preference number: 4 (lower is better)
Translates to: YGGTPKLQWQERIHSCYLEARTW*DISIYQ
Trigger: CTGGTAGATGGAAATATCCCACCAAGTTCTGGCCTC...TAAGTAACAAGAATGTATCCTCTCCTGCCACTGTAATTTGGGTGTGCCACCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CCA 90 bp GGACAATATTTCATAAGCAATGTATGGTGGCACACCCAAATTACAGTGGCAGGAGGAGAGGCCAGAACTTaGTGGGATATTTCCATCTAC +
Preference number: 4 (lower is better)
Translates to: GQYFISNVWWHTQITVAGGEART*WDISIY
Trigger: GTAGATGGAAATATCCCACCAAGTTCTGGCCTCTCC...TCCTGCCACTGTAATTTGGGTGTGCCACCATACATTGCTTATGAAATATTGTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CCA 90 bp AATTTACTGTGGCACAGAAAGTCCTGCCAATTCCTAAGTGCCCTAAGTAGTTTCGGAGAGGCCAGAACTTaGTGGGATATTTCCATCTAC +
Preference number: 4 (lower is better)
Translates to: NLLWHRKSCQFLSALSSFGEART*WDISIY
Trigger: GTAGATGGAAATATCCCACCAAGTTCTGGCCTCTCC...GAAACTACTTAGGGCACTTAGGAATTGGCAGGACTTTCTGTGCCACAGTAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327171.7
ENST00000396509.6
ENST00000544523.5
ENST00000559454.5
ENST00000560031.6
ENST00000560119.5
CDS-3UTR CCA 90 bp ATTTCCATCTACCAGGCAGTTCATTCCAGTCAGGTTACTAAGACCAAAGTGTTCGGAGAGGCCAGAACTTaGTGGGATATTTCCATCTAC +
Preference number: 4 (lower is better)
Translates to: ISIYQAVHSSQVTKTKVFGEART*WDISIY
Trigger: GTAGATGGAAATATCCCACCAAGTTCTGGCCTCTCC...GAACACTTTGGTCTTAGTAACCTGACTGGAATGAACTGCCTGGTAGATGGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558775.5
ENST00000559208.5
ENST00000559423.5
ENST00000559883.5
ENST00000559963.5
ENST00000560119.5
CDS-3UTR CCA 90 bp AATTTACTGTGGCACAGAAAGTCCTGCCAATTCCTAAGTGCCCTAAGTAGTTTCCTGCAAGTTCCACCTTaGATAGATTCCTTCCCAGCA +
Preference number: 4 (lower is better)
Translates to: NLLWHRKSCQFLSALSSFLQVPP*IDSFPA
Trigger: TGCTGGGAAGGAATCTATCCAAGGTGGAACTTGCAG...GAAACTACTTAGGGCACTTAGGAATTGGCAGGACTTTCTGTGCCACAGTAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327171.7
ENST00000396509.6
ENST00000544523.5
ENST00000559454.5
ENST00000560031.6
ENST00000560119.5
CDS-3UTR CCA 90 bp TTTGCCTATACCCATAGGCTTTGCTCATCTGCAGTGTGCACTCCACAGCTTTTAAGAAATGATATAGACTaGTCCATGCCTCCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: FAYTHRLCSSAVCTPQLLRNDID*SMPPPS
Trigger: TGAAGGAGGAGGCATGGACCAGTCTATATCATTTCT...TAAAAGCTGTGGAGTGCACACTGCAGATGAGCAAAGCCTATGGGTATAGGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CCA 90 bp GAAGTTGCTGCCTTATTCATCTCCACACAACTGTTGGCAATCACAAACACTGCTTCTCCACACAACTGTTaGCAATCACAAACACTGCTC +
Preference number: 4 (lower is better)
Translates to: EVAALFISTQLLAITNTASPHNC*QSQTLL
Trigger: GAGCAGTGTTTGTGATTGCCAACAGTTGTGTGGAGA...AGCAGTGTTTGTGATTGCCAACAGTTGTGTGGAGATGAATAAGGCAGCAACTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559423.5
ENST00000560119.5
CDS-3UTR CCA 90 bp TCGCACTATAGTAGTACTGGTCCAGAGTTTAATCGTGTTCTCTTCAATTTTGGATCCCGGCAGCTCATGTaGCTCTGGTTCATCAACTCT +
Preference number: 4 (lower is better)
Translates to: SHYSSTGPEFNRVLFNFGSRQLM*LWFINS
Trigger: AGAGTTGATGAACCAGAGCCACATGAGCTGCCGGGA...TCCAAAATTGAAGAGAACACGATTAAACTCTGGACCAGTACTACTATAGTGCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558399.5
ENST00000559580.5
CDS-3UTR CCA 90 bp AGTCGCACTATAGTAGTACTGGTCCAGAGTTTAATCGTGTTCTCTTCAATTTTGTCCCGGCAGCTCATGTaGCTCTGGTTCATCAACTCT +
Preference number: 4 (lower is better)
Translates to: SRTIVVLVQSLIVFSSILSRQLM*LWFINS
Trigger: AGAGTTGATGAACCAGAGCCACATGAGCTGCCGGGA...CAAAATTGAAGAGAACACGATTAAACTCTGGACCAGTACTACTATAGTGCGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558399.5
ENST00000559580.5
CDS-3UTR CCA 90 bp TTTGCCTATACCCATAGGCTTTGCTCATCTGCAGTGTGCACTCCACAGCTTTTAAATATGTCTGAATGCTaGACAATTGGAGGTCAGGGA +
Preference number: 4 (lower is better)
Translates to: FAYTHRLCSSAVCTPQLLNMSEC*TIGGQG
Trigger: TCCCTGACCTCCAATTGTCCAGCATTCAGACATATT...TAAAAGCTGTGGAGTGCACACTGCAGATGAGCAAAGCCTATGGGTATAGGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR TCA 90 bp CACATACCTGCATACCTGCTTTACAATGGGGTGCATATATACAAACAAGCTTTGGCTCTCCTATTATGTTaGCTCTTCCTGGTGCTCGAA +
Preference number: 4 (lower is better)
Translates to: HIPAYLLYNGVHIYKQALALLLC*LFLVLE
Trigger: TTCGAGCACCAGGAAGAGTCAACATAATAGGAGAGC...CAAAGCTTGTTTGTATATATGCACCCCATTGTAAAGCAGGTATGCAGGTATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR TCA 90 bp GTTCATTCCAGTCAGGTTACTAAGACCAAAGTGTTCCTGAATTCCTTTAAGTCCGCTCTCCTATTATGTTaGCTCTTCCTGGTGCTCGAA +
Preference number: 4 (lower is better)
Translates to: VHSSQVTKTKVFLNSFKSALLLC*LFLVLE
Trigger: TTCGAGCACCAGGAAGAGTCAACATAATAGGAGAGC...GGACTTAAAGGAATTCAGGAACACTTTGGTCTTAGTAACCTGACTGGAATGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558956.5
ENST00000559208.5
ENST00000559423.5
ENST00000559883.5
ENST00000559963.5
ENST00000560119.5
CDS-3UTR TCA 90 bp GAAGTTGCTGCCTTATTCATCTCCACACAACTGTTGGCAATCACAAACACTGCTTTCTTCTGCAAGAAATaGTATAGACTGGTCCATGCC +
Preference number: 4 (lower is better)
Translates to: EVAALFISTQLLAITNTAFFCKK*YRLVHA
Trigger: GGCATGGACCAGTCTATATCATTTCTTGCAGAAGAA...AGCAGTGTTTGTGATTGCCAACAGTTGTGTGGAGATGAATAAGGCAGCAACTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559423.5
ENST00000560119.5
CDS-3UTR TCA 90 bp TTTGCCTATACCCATAGGCTTTGCTCATCTGCAGTGTGCACTCCACAGCTTTTATTTACTCACCTTTTGTaGAGAAGAAATCACCTGGTG +
Preference number: 4 (lower is better)
Translates to: FAYTHRLCSSAVCTPQLLFTHLL*RRNHLV
Trigger: CACCAGGTGATTTCTTCTTCACAAAAGGTGAGTAAA...TAAAAGCTGTGGAGTGCACACTGCAGATGAGCAAAGCCTATGGGTATAGGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR TCA 90 bp AGACTCCAAGCAAAGGCTACCAAGAAACCTCATGAAGTGAAACAGGACTTTGAGCTGGTAAGTGGTAAATaGTTTGAGTGTCAGGGAAAC +
Preference number: 4 (lower is better)
Translates to: RLQAKATKKPHEVKQDFELVSGK*FECQGN
Trigger: GTTTCCCTGACACTCAAATCATTTACCACTTACCAG...CTCAAAGTCCTGTTTCACTTCATGAGGTTTCTTGGTAGCCTTTGCTTGGAGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR TCA 90 bp CACATACCTGCATACCTGCTTTACAATGGGGTGCATATATACAAACAAGCTTTGAACAGCTGTGTTAGATaGATGGTCCCTGCCCTCAAT +
Preference number: 4 (lower is better)
Translates to: HIPAYLLYNGVHIYKQALNSCVR*MVPALN
Trigger: ATTGAGGGCAGGGACCATTCATCTAACACAGCTGTT...CAAAGCTTGTTTGTATATATGCACCCCATTGTAAAGCAGGTATGCAGGTATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR TCA 90 bp CAAGCAAAGGCTACCAAGAAACCTCATGAAGTGAAACAGGACTTTGAGAAGTTCCCCATTTCCAGCTTCTaGCCAGGAACAGTTTATGTA +
Preference number: 4 (lower is better)
Translates to: QAKATKKPHEVKQDFEKFPISSF*PGTVYV
Trigger: TACATAAACTGTTCCTGGTCAGAAGCTGGAAATGGG...GAACTTCTCAAAGTCCTGTTTCACTTCATGAGGTTTCTTGGTAGCCTTTGCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR TCA 90 bp GTCCACATAAGAAATAGTTGTGCCACAAAGGCTTGGTTTTATCAATCTGGATGTATCACGAGACTTCTGTaGCAGGAGCCGTTTTCTTCC +
Preference number: 4 (lower is better)
Translates to: VHIRNSCATKAWFYQSGCITRLL*QEPFSS
Trigger: GGAAGAAAACGGCTCCTGTCACAGAAGTCTCGTGAT...ACATCCAGATTGATAAAACCAAGCCTTTGTGGCACAACTATTTCTTATGTGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558956.5
ENST00000559208.5
CDS-3UTR TCA 90 bp ATACAAGGGATTTGTATTGGCCAGTTGGAGAGCGTACGTTTTCACAGGTTCTACAGAAAGCTATTATGTTaGCTCTTCCTGGTGCTCGAA +
Preference number: 4 (lower is better)
Translates to: IQGICIGQLESVRFHRFYRKLLC*LFLVLE
Trigger: TTCGAGCACCAGGAAGAGTCAACATAATAGCTTTCT...GTAGAACCTGTGAAAACGTACGCTCTCCAACTGGCCAATACAAATCCCTTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558775.5
CDS-3UTR GCA 90 bp GGACAATATTTCATAAGCAATGTATGGTGGCACACCCAAATTACAGTGGCAGGAGTTGACTCTTCCTGGTaGTCGAACATAAAACTTGGG +
Preference number: 4 (lower is better)
Translates to: GQYFISNVWWHTQITVAGVDSSW*SNIKLG
Trigger: CCCAAGTTTTATGTTCGAGCACCAGGAAGAGTCAAC...TCCTGCCACTGTAATTTGGGTGTGCCACCATACATTGCTTATGAAATATTGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR GCA 90 bp AATTTACTGTGGCACAGAAAGTCCTGCCAATTCCTAAGTGCCCTAAGTAGTTTCGTTGACTCTTCCTGGTaGTCGAACATAAAACTTGGG +
Preference number: 4 (lower is better)
Translates to: NLLWHRKSCQFLSALSSFVDSSW*SNIKLG
Trigger: CCCAAGTTTTATGTTCGAGCACCAGGAAGAGTCAAC...GAAACTACTTAGGGCACTTAGGAATTGGCAGGACTTTCTGTGCCACAGTAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327171.7
ENST00000396509.6
ENST00000544523.5
ENST00000559454.5
ENST00000560031.6
ENST00000560119.5
CDS-3UTR GCA 90 bp ATGCCCTGTAGAAATGTTGGACAAGTAGTATCAGATATTCCACCACTCAGTAATTGCCTCCTCCTTCAGTaGCAATGTAACGCTCACTCT +
Preference number: 4 (lower is better)
Translates to: MPCRNVGQVVSDIPPLSNCLLLQ*QCNAHS
Trigger: AGAGTGAGCGTTACATTGGCACTGAAGGAGGAGGCA...ATTACTGAGTGGTGGAATATCTGATACTACTTGTCCAACATTTCTACAGGGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR GCA 90 bp GGACAATATTTCATAAGCAATGTATGGTGGCACACCCAAATTACAGTGGCAGGAGGCAATCACAAACACTaGTCCACTTGGGAGTTTTAC +
Preference number: 4 (lower is better)
Translates to: GQYFISNVWWHTQITVAGGNHKH*STWEFY
Trigger: GTAAAACTCCCAAGTGGAGCAGTGTTTGTGATTGCC...TCCTGCCACTGTAATTTGGGTGTGCCACCATACATTGCTTATGAAATATTGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR GCA 90 bp AATTTACTGTGGCACAGAAAGTCCTGCCAATTCCTAAGTGCCCTAAGTAGTTTCGGCAATCACAAACACTaGTCCACTTGGGAGTTTTAC +
Preference number: 4 (lower is better)
Translates to: NLLWHRKSCQFLSALSSFGNHKH*STWEFY
Trigger: GTAAAACTCCCAAGTGGAGCAGTGTTTGTGATTGCC...GAAACTACTTAGGGCACTTAGGAATTGGCAGGACTTTCTGTGCCACAGTAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327171.7
ENST00000396509.6
ENST00000544523.5
ENST00000559454.5
ENST00000560031.6
ENST00000560119.5
CDS-3UTR GCA 90 bp TTTCATAAGCAATGTATGGTGGCACACCCAAATTACAGTGGCAGGAGAGGATACGAAATGGGAAGTTGCTaGCTTATTCATCTCCACACA +
Preference number: 4 (lower is better)
Translates to: FHKQCMVAHPNYSGRRGYEMGSC*LIHLHT
Trigger: TGTGTGGAGATGAATAAGGCAGCAACTTCCCATTTC...GTATCCTCTCCTGCCACTGTAATTTGGGTGTGCCACCATACATTGCTTATGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR GCA 90 bp AATTTACTGTGGCACAGAAAGTCCTGCCAATTCCTAAGTGCCCTAAGTAGTTTCGCTGTACACATGCTTTaGCCGCTGATAGAGTTTGAA +
Preference number: 4 (lower is better)
Translates to: NLLWHRKSCQFLSALSSFAVHML*PLIEFE
Trigger: TTCAAACTCTATCAGCGGGCAAAGCATGTGTACAGC...GAAACTACTTAGGGCACTTAGGAATTGGCAGGACTTTCTGTGCCACAGTAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327171.7
ENST00000396509.6
ENST00000544523.5
ENST00000559454.5
ENST00000560031.6
ENST00000560119.5
CDS-3UTR GCA 90 bp AAATGGGAAGTTGCTGCCTTATTCATCTCCACACAACTGTTGGCAATCACAAACGCTGTACACATGCTTTaGCCGCTGATAGAGTTTGAA +
Preference number: 4 (lower is better)
Translates to: KWEVAALFISTQLLAITNAVHML*PLIEFE
Trigger: TTCAAACTCTATCAGCGGGCAAAGCATGTGTACAGC...GTTTGTGATTGCCAACAGTTGTGTGGAGATGAATAAGGCAGCAACTTCCCATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560119.5
CDS-3UTR GCA 90 bp ATCTTATTCTTCACTACATACCAAAGCAAAGCCTTCACTCTCACTGAGCCTCCTTGCTCATCTGCAGTGTaGACTCCACAGCTTTTAAAC +
Preference number: 4 (lower is better)
Translates to: ILFFTTYQSKAFTLTEPPCSSAV*TPQLLN
Trigger: GTTTAAAAGCTGTGGAGTGCACACTGCAGATGAGCA...AGGAGGCTCAGTGAGAGTGAAGGCTTTGCTTTGGTATGTAGTGAAGAATAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR GCA 90 bp TTTCATAAGCAATGTATGGTGGCACACCCAAATTACAGTGGCAGGAGAGGATACCAAACTATATACATCTaGAGACCAGATGTGGCCCAT +
Preference number: 4 (lower is better)
Translates to: FHKQCMVAHPNYSGRRGYQTIYI*RPDVAH
Trigger: ATGGGCCACATCTGGTCTGCAGATGTATATAGTTTG...GTATCCTCTCCTGCCACTGTAATTTGGGTGTGCCACCATACATTGCTTATGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR GCA 90 bp CTTGGTTTTATCAATCTGGATGTTATTAGCACTAGTACTGAAGTCCGGATACAAAGTGAGCCGAGATCATaGCACTGCACTCTAGACTGG +
Preference number: 4 (lower is better)
Translates to: LGFINLDVISTSTEVRIQSEPRS*HCTLDW
Trigger: CCAGTCTAGAGTGCAGTGGCATGATCTCGGCTCACT...TTGTATCCGGACTTCAGTACTAGTGCTAATAACATCCAGATTGATAAAACCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558775.5
ENST00000559963.5
CDS-3UTR CCA 90 bp TCAATCTGGATGTTATTAGCACTAGTACTGAAGTCCCTCCTGCTGTGTGGCCCATATGTTGACTCTTCCTaGTGCTCGAACATAAAACTT +
Preference number: 4 (lower is better)
Translates to: SIWMLLALVLKSLLLCGPYVDSS*CSNIKL
Trigger: AAGTTTTATGTTCGAGCACCAGGAAGAGTCAACATA...TGGGCCACACAGCAGGAGGGACTTCAGTACTAGTGCTAATAACATCCAGATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558956.5
ENST00000559208.5
ENST00000559423.5
CDS-3UTR CCA 90 bp GCCTTATTCATCTCCACACAACTGTTGGCAATCACAAACACTGCTCCACTTGGGTATGTTGACTCTTCCTaGTGCTCGAACATAAAACTT +
Preference number: 4 (lower is better)
Translates to: ALFISTQLLAITNTAPLGYVDSS*CSNIKL
Trigger: AAGTTTTATGTTCGAGCACCAGGAAGAGTCAACATA...CCCAAGTGGAGCAGTGTTTGTGATTGCCAACAGTTGTGTGGAGATGAATAAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559423.5
ENST00000560119.5
CDS-3UTR CCA 90 bp TTCACAGGTTCTACAGCTATTAGCACATCTTGTTCTACAGCCATAGGAAGAACAGGAGAGGCCAGAACTTaGTGGGATATTTCCATCTAC +
Preference number: 4 (lower is better)
Translates to: FTGSTAISTSCSTAIGRTGEART*WDISIY
Trigger: GTAGATGGAAATATCCCACCAAGTTCTGGCCTCTCC...TGTTCTTCCTATGGCTGTAGAACAAGATGTGCTAATAGCTGTAGAACCTGTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000558775.5
ENST00000559883.5
ENST00000559963.5
CDS-3UTR CCA 90 bp CTTGGTTTTATCAATCTGGATGTTATTAGCACTAGTACTGAAGTCCGGATACAAAACAGACCAAAGCACTaGAGCTGGAGAGGCCAGAAC +
Preference number: 4 (lower is better)
Translates to: LGFINLDVISTSTEVRIQNRPKH*SWRGQN
Trigger: GTTCTGGCCTCTCCAGCTCCAGTGCTTTGGTCTGTT...TTGTATCCGGACTTCAGTACTAGTGCTAATAACATCCAGATTGATAAAACCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000558775.5
ENST00000559883.5
ENST00000559963.5
CDS-3UTR CCA 90 bp TTTCATAAGCAATGTATGGTGGCACACCCAAATTACAGTGGCAGGAGAGGATACTGTAACGCTCACTCTTaGCACAGATTTCTGCAAGTT +
Preference number: 4 (lower is better)
Translates to: FHKQCMVAHPNYSGRRGYCNAHS*HRFLQV
Trigger: AACTTGCAGAAATCTGTGCCAAGAGTGAGCGTTACA...GTATCCTCTCCTGCCACTGTAATTTGGGTGTGCCACCATACATTGCTTATGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CCA 90 bp AGAGCGTACGTTTTCACAGGTTCTACAGCTATTAGCACATCTTGTTCTACAGCCTGTAACGCTCACTCTTaGCACAGATTTCTGCAAGTT +
Preference number: 4 (lower is better)
Translates to: RAYVFTGSTAISTSCSTACNAHS*HRFLQV
Trigger: AACTTGCAGAAATCTGTGCCAAGAGTGAGCGTTACA...GGCTGTAGAACAAGATGTGCTAATAGCTGTAGAACCTGTGAAAACGTACGCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559883.5
CDS-3UTR CCA 90 bp GGGATATTTCCATCTACCAGGCAGTTCATTCCAGTCAGGTTACTAAGACCAAAGAGAAATGATATAGACTaGTCCATGCCTCCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: GIFPSTRQFIPVRLLRPKRNDID*SMPPPS
Trigger: TGAAGGAGGAGGCATGGACCAGTCTATATCATTTCT...CTTTGGTCTTAGTAACCTGACTGGAATGAACTGCCTGGTAGATGGAAATATCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000559208.5
ENST00000559423.5
ENST00000560119.5
CDS-3UTR CCA 90 bp AATTTACTGTGGCACAGAAAGTCCTGCCAATTCCTAAGTGCCCTAAGTAGTTTCAAACACTGCTCCACTTaGGAGTTTTACATCGGTTGC +
Preference number: 4 (lower is better)
Translates to: NLLWHRKSCQFLSALSSFKHCST*EFYIGC
Trigger: GCAACCGATGTAAAACTCCCAAGTGGAGCAGTGTTT...GAAACTACTTAGGGCACTTAGGAATTGGCAGGACTTTCTGTGCCACAGTAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327171.7
ENST00000396509.6
ENST00000544523.5
ENST00000559454.5
ENST00000560031.6
ENST00000560119.5
CDS-3UTR CCA 90 bp ATCTTATTCTTCACTACATACCAAAGCAAAGCCTTCACTCTCACTGAGCCTCCTAAACACTGCTCCACTTaGGAGTTTTACATCGGTTGC +
Preference number: 4 (lower is better)
Translates to: ILFFTTYQSKAFTLTEPPKHCST*EFYIGC
Trigger: GCAACCGATGTAAAACTCCCAAGTGGAGCAGTGTTT...AGGAGGCTCAGTGAGAGTGAAGGCTTTGCTTTGGTATGTAGTGAAGAATAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CCA 90 bp GAAATGGGAAGTTGCTGCCTTATTCATCTCCACACAACTGTTGGCAATCACAAAAAACACTGCTCCACTTaGGAGTTTTACATCGGTTGC +
Preference number: 4 (lower is better)
Translates to: EMGSCCLIHLHTTVGNHKKHCST*EFYIGC
Trigger: GCAACCGATGTAAAACTCCCAAGTGGAGCAGTGTTT...TTTGTGATTGCCAACAGTTGTGTGGAGATGAATAAGGCAGCAACTTCCCATTTC
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000559423.5
ENST00000560119.5
CDS-3UTR CCA 90 bp AATTTACTGTGGCACAGAAAGTCCTGCCAATTCCTAAGTGCCCTAAGTAGTTTCTCTCCACACAACTGTTaGCAATCACAAACACTGCTC +
Preference number: 4 (lower is better)
Translates to: NLLWHRKSCQFLSALSSFSPHNC*QSQTLL
Trigger: GAGCAGTGTTTGTGATTGCCAACAGTTGTGTGGAGA...GAAACTACTTAGGGCACTTAGGAATTGGCAGGACTTTCTGTGCCACAGTAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327171.7
ENST00000396509.6
ENST00000544523.5
ENST00000559454.5
ENST00000560031.6
ENST00000560119.5
CDS-3UTR CCA 90 bp ACAAACACTGCTCCACTTGGGAGTTTTACATCGGTTGCCCTCAGAGGACTAAATACCCTGATATTGAAATaGGAAGTTGCTGCCTTATTC +
Preference number: 4 (lower is better)
Translates to: TNTAPLGSFTSVALRGLNTLILK*EVAALF
Trigger: GAATAAGGCAGCAACTTCCCATTTCAATATCAGGGT...ATTTAGTCCTCTGAGGGCAACCGATGTAAAACTCCCAAGTGGAGCAGTGTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559423.5
ENST00000560119.5
CDS-3UTR CCA 90 bp TATGGTGGCACACCCAAATTACAGTGGCAGGAGAGGATACATTCTTGTTACTTACACATCTTGAGTGTTTaGACTCAGGATTTGGGTTCG +
Preference number: 4 (lower is better)
Translates to: YGGTPKLQWQERIHSCYLHILSV*TQDLGS
Trigger: CGAACCCAAATCCTGAGTCCAAACACTCAAGATGTG...TAAGTAACAAGAATGTATCCTCTCCTGCCACTGTAATTTGGGTGTGCCACCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CCA 90 bp AATTTACTGTGGCACAGAAAGTCCTGCCAATTCCTAAGTGCCCTAAGTAGTTTCCACATCTTGAGTGTTTaGACTCAGGATTTGGGTTCG +
Preference number: 4 (lower is better)
Translates to: NLLWHRKSCQFLSALSSFHILSV*TQDLGS
Trigger: CGAACCCAAATCCTGAGTCCAAACACTCAAGATGTG...GAAACTACTTAGGGCACTTAGGAATTGGCAGGACTTTCTGTGCCACAGTAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327171.7
ENST00000396509.6
ENST00000544523.5
ENST00000559454.5
ENST00000560031.6
CDS-3UTR CCA 90 bp TATAGTAGTACTGGTCCAGAGTTTAATCGTGTTCTCTTCAATTTTGGAGGTCAGCATATCTTCTTAAACTaGAGCACTCGCGCAGCCTCG +
Preference number: 4 (lower is better)
Translates to: YSSTGPEFNRVLFNFGGQHIFLN*STRAAS
Trigger: CGAGGCTGCGCGAGTGCTCCAGTTTAAGAAGATATG...CTGACCTCCAAAATTGAAGAGAACACGATTAAACTCTGGACCAGTACTACTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558399.5
ENST00000559580.5
CDS-3UTR CCA 90 bp ATGCCCTGTAGAAATGTTGGACAAGTAGTATCAGATATTCCACCACTCAGTAATAACTCTCCCAGCAGCTaGACCATGTTTTCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: MPCRNVGQVVSDIPPLSNNSPSS*TMFSGA
Trigger: AGCACCTGAAAACATGGTCCAGCTGCTGGGAGAGTT...ATTACTGAGTGGTGGAATATCTGATACTACTTGTCCAACATTTCTACAGGGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CCA 90 bp TCGCACTATAGTAGTACTGGTCCAGAGTTTAATCGTGTTCTCTTCAATTTTGGACATTTGCTAGAAAGCTaGGCAGCTTGTCCGCAGGTA +
Preference number: 4 (lower is better)
Translates to: SHYSSTGPEFNRVLFNFGHLLES*AACPQV
Trigger: TACCTGCGGACAAGCTGCCCAGCTTTCTAGCAAATG...TCCAAAATTGAAGAGAACACGATTAAACTCTGGACCAGTACTACTATAGTGCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559580.5
CDS-3UTR CCA 90 bp TTTCATAAGCAATGTATGGTGGCACACCCAAATTACAGTGGCAGGAGAGGATACCTTGGAAGTGCCTCTTaGATTAGAGAGGTATTTGAG +
Preference number: 4 (lower is better)
Translates to: FHKQCMVAHPNYSGRRGYLGSAS*IREVFE
Trigger: CTCAAATACCTCTCTAATCCAAGAGGCACTTCCAAG...GTATCCTCTCCTGCCACTGTAATTTGGGTGTGCCACCATACATTGCTTATGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CCA 90 bp TCCGAAGCTGAAATTGAGAGAGAATGTGTGGCATCACTATCGTCATCATCATCAGCTGTGTTAGATGAATaGTCCCTGCCCTCAATTATC +
Preference number: 4 (lower is better)
Translates to: SEAEIERECVASLSSSSSAVLDE*SLPSII
Trigger: GATAATTGAGGGCAGGGACCATTCATCTAACACAGC...TGATGATGATGACGATAGTGATGCCACACATTCTCTCTCAATTTCAGCTTCGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR TCA 90 bp TTATCAATCTGGATGTTATTAGCACTAGTACTGAAGTCCGGATACAAGGGATTTTTACTTTCACCGGAATaGGATGCGTCCAGAGTCCCA +
Preference number: 4 (lower is better)
Translates to: LSIWMLLALVLKSGYKGFLLSPE*DASRVP
Trigger: TGGGACTCTGGACGCATCTCATTCCGGTGAAAGTAA...AAATCCCTTGTATCCGGACTTCAGTACTAGTGCTAATAACATCCAGATTGATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000558775.5
ENST00000559883.5
ENST00000559963.5
CDS-3UTR TCA 90 bp AATTTACTGTGGCACAGAAAGTCCTGCCAATTCCTAAGTGCCCTAAGTAGTTTCTTCTTCTGCAAGAAATaGTATAGACTGGTCCATGCC +
Preference number: 4 (lower is better)
Translates to: NLLWHRKSCQFLSALSSFFFCKK*YRLVHA
Trigger: GGCATGGACCAGTCTATATCATTTCTTGCAGAAGAA...GAAACTACTTAGGGCACTTAGGAATTGGCAGGACTTTCTGTGCCACAGTAAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327171.7
ENST00000396509.6
ENST00000544523.5
ENST00000559454.5
ENST00000560031.6
ENST00000560119.5
CDS-3UTR TCA 90 bp ATCTACCAGGCAGTTCATTCCAGTCAGGTTACTAAGACCAAAGTGTTCCTGAATTTCTTCTGCAAGAAATaGTATAGACTGGTCCATGCC +
Preference number: 4 (lower is better)
Translates to: IYQAVHSSQVTKTKVFLNFFCKK*YRLVHA
Trigger: GGCATGGACCAGTCTATATCATTTCTTGCAGAAGAA...ATTCAGGAACACTTTGGTCTTAGTAACCTGACTGGAATGAACTGCCTGGTAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000559208.5
ENST00000559423.5
ENST00000560119.5
CDS-3UTR TCA 90 bp AAATGGGAAGTTGCTGCCTTATTCATCTCCACACAACTGTTGGCAATCACAAACTTCTTCTGCAAGAAATaGTATAGACTGGTCCATGCC +
Preference number: 4 (lower is better)
Translates to: KWEVAALFISTQLLAITNFFCKK*YRLVHA
Trigger: GGCATGGACCAGTCTATATCATTTCTTGCAGAAGAA...GTTTGTGATTGCCAACAGTTGTGTGGAGATGAATAAGGCAGCAACTTCCCATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559423.5
ENST00000560119.5
CDS-3UTR TCA 90 bp GGACAATATTTCATAAGCAATGTATGGTGGCACACCCAAATTACAGTGGCAGGATTCTTCTGCAAGAAATaGTATAGACTGGTCCATGCC +
Preference number: 4 (lower is better)
Translates to: GQYFISNVWWHTQITVAGFFCKK*YRLVHA
Trigger: GGCATGGACCAGTCTATATCATTTCTTGCAGAAGAA...TCCTGCCACTGTAATTTGGGTGTGCCACCATACATTGCTTATGAAATATTGTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR TCA 90 bp AATTTACTGTGGCACAGAAAGTCCTGCCAATTCCTAAGTGCCCTAAGTAGTTTCAAGATGAGCACATCTTaGGTGTTTGGACTCAGGATT +
Preference number: 4 (lower is better)
Translates to: NLLWHRKSCQFLSALSSFKMSTS*VFGLRI
Trigger: AATCCTGAGTCCAAACACTCAAGATGTGCTCATCTT...GAAACTACTTAGGGCACTTAGGAATTGGCAGGACTTTCTGTGCCACAGTAAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327171.7
ENST00000396509.6
ENST00000544523.5
ENST00000559454.5
ENST00000560031.6
CDS-3UTR TCA 90 bp ATCTTATTCTTCACTACATACCAAAGCAAAGCCTTCACTCTCACTGAGCCTCCTAAGATGAGCACATCTTaGGTGTTTGGACTCAGGATT +
Preference number: 4 (lower is better)
Translates to: ILFFTTYQSKAFTLTEPPKMSTS*VFGLRI
Trigger: AATCCTGAGTCCAAACACTCAAGATGTGCTCATCTT...AGGAGGCTCAGTGAGAGTGAAGGCTTTGCTTTGGTATGTAGTGAAGAATAAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR TCA 90 bp AGACTCCAAGCAAAGGCTACCAAGAAACCTCATGAAGTGAAACAGGACTTTGAGATTTCTGCCCACTCTTaGTATACATACAGAGATACC +
Preference number: 4 (lower is better)
Translates to: RLQAKATKKPHEVKQDFEISAHS*YTYRDT
Trigger: GGTATCTCTGTATGTATATCAAGAGTGGGCAGAAAT...CTCAAAGTCCTGTTTCACTTCATGAGGTTTCTTGGTAGCCTTTGCTTGGAGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR TCA 90 bp CAAGCAAAGGCTACCAAGAAACCTCATGAAGTGAAACAGGACTTTGAGAAGTTCCTGGTAAGTGGTAAATaGTTTGAGTGTCAGGGAAAC +
Preference number: 4 (lower is better)
Translates to: QAKATKKPHEVKQDFEKFLVSGK*FECQGN
Trigger: GTTTCCCTGACACTCAAATCATTTACCACTTACCAG...GAACTTCTCAAAGTCCTGTTTCACTTCATGAGGTTTCTTGGTAGCCTTTGCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR TCA 90 bp TCCGAAGCTGAAATTGAGAGAGAATGTGTGGCATCACTATCGTCATCATCATCAAGTGTACAATATGTCTaGATGCTGGACAATTGGAGG +
Preference number: 4 (lower is better)
Translates to: SEAEIERECVASLSSSSSSVQYV*MLDNWR
Trigger: CCTCCAATTGTCCAGCATTCAGACATATTGTACACT...TGATGATGATGACGATAGTGATGCCACACATTCTCTCTCAATTTCAGCTTCGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR GCA 90 bp CAAGCAAAGGCTACCAAGAAACCTCATGAAGTGAAACAGGACTTTGAGAAGTTCGAGTTTTACATCGGTTaGCCTCAGAGGACTAAATTC +
Preference number: 4 (lower is better)
Translates to: QAKATKKPHEVKQDFEKFEFYIG*PQRTKF
Trigger: GAATTTAGTCCTCTGAGGGCAACCGATGTAAAACTC...GAACTTCTCAAAGTCCTGTTTCACTTCATGAGGTTTCTTGGTAGCCTTTGCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR GCA 90 bp AATTTACTGTGGCACAGAAAGTCCTGCCAATTCCTAAGTGCCCTAAGTAGTTTCGAGTTTTACATCGGTTaGCCTCAGAGGACTAAATTC +
Preference number: 4 (lower is better)
Translates to: NLLWHRKSCQFLSALSSFEFYIG*PQRTKF
Trigger: GAATTTAGTCCTCTGAGGGCAACCGATGTAAAACTC...GAAACTACTTAGGGCACTTAGGAATTGGCAGGACTTTCTGTGCCACAGTAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327171.7
ENST00000396509.6
ENST00000544523.5
ENST00000559454.5
ENST00000560031.6
ENST00000560119.5
CDS-3UTR GCA 90 bp ATCTACCAGGCAGTTCATTCCAGTCAGGTTACTAAGACCAAAGTGTTCCTGAATGAGTTTTACATCGGTTaGCCTCAGAGGACTAAATTC +
Preference number: 4 (lower is better)
Translates to: IYQAVHSSQVTKTKVFLNEFYIG*PQRTKF
Trigger: GAATTTAGTCCTCTGAGGGCAACCGATGTAAAACTC...ATTCAGGAACACTTTGGTCTTAGTAACCTGACTGGAATGAACTGCCTGGTAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559423.5
ENST00000560119.5
CDS-3UTR GCA 90 bp CACATACCTGCATACCTGCTTTACAATGGGGTGCATATATACAAACAAGCTTTGGGCAATCACAAACACTaGTCCACTTGGGAGTTTTAC +
Preference number: 4 (lower is better)
Translates to: HIPAYLLYNGVHIYKQALGNHKH*STWEFY
Trigger: GTAAAACTCCCAAGTGGAGCAGTGTTTGTGATTGCC...CAAAGCTTGTTTGTATATATGCACCCCATTGTAAAGCAGGTATGCAGGTATGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR GCA 90 bp ATATTTCCATCTACCAGGCAGTTCATTCCAGTCAGGTTACTAAGACCAAAGTGTGGCAATCACAAACACTaGTCCACTTGGGAGTTTTAC +
Preference number: 4 (lower is better)
Translates to: IFPSTRQFIPVRLLRPKCGNHKH*STWEFY
Trigger: GTAAAACTCCCAAGTGGAGCAGTGTTTGTGATTGCC...ACACTTTGGTCTTAGTAACCTGACTGGAATGAACTGCCTGGTAGATGGAAATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559423.5
ENST00000560119.5
CDS-3UTR GCA 90 bp TATGGTGGCACACCCAAATTACAGTGGCAGGAGAGGATACATTCTTGTTACTTAGAAATGGGAAGTTGCTaGCTTATTCATCTCCACACA +
Preference number: 4 (lower is better)
Translates to: YGGTPKLQWQERIHSCYLEMGSC*LIHLHT
Trigger: TGTGTGGAGATGAATAAGGCAGCAACTTCCCATTTC...TAAGTAACAAGAATGTATCCTCTCCTGCCACTGTAATTTGGGTGTGCCACCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR GCA 90 bp AATTTACTGTGGCACAGAAAGTCCTGCCAATTCCTAAGTGCCCTAAGTAGTTTCGAAATGGGAAGTTGCTaGCTTATTCATCTCCACACA +
Preference number: 4 (lower is better)
Translates to: NLLWHRKSCQFLSALSSFEMGSC*LIHLHT
Trigger: TGTGTGGAGATGAATAAGGCAGCAACTTCCCATTTC...GAAACTACTTAGGGCACTTAGGAATTGGCAGGACTTTCTGTGCCACAGTAAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327171.7
ENST00000396509.6
ENST00000544523.5
ENST00000559454.5
ENST00000560031.6
ENST00000560119.5
CDS-3UTR GCA 90 bp ATTGAAATGGGAAGTTGCTGCCTTATTCATCTCCACACAACTGTTGGCAATCACGAAATGGGAAGTTGCTaGCTTATTCATCTCCACACA +
Preference number: 4 (lower is better)
Translates to: IEMGSCCLIHLHTTVGNHEMGSC*LIHLHT
Trigger: TGTGTGGAGATGAATAAGGCAGCAACTTCCCATTTC...GTGATTGCCAACAGTTGTGTGGAGATGAATAAGGCAGCAACTTCCCATTTCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559423.5
ENST00000560119.5
CDS-3UTR GCA 90 bp ACAAACACTGCTCCACTTGGGAGTTTTACATCGGTTGCCCTCAGAGGACTAAATAGTACTTTGTCCCATTaGAAGCTTTTGTATTTAGCC +
Preference number: 4 (lower is better)
Translates to: TNTAPLGSFTSVALRGLNSTLSH*KLLYLA
Trigger: GGCTAAATACAAAAGCTTGCAATGGGACAAAGTACT...ATTTAGTCCTCTGAGGGCAACCGATGTAAAACTCCCAAGTGGAGCAGTGTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560119.5
CDS-3UTR GCA 90 bp TTTCAGCATGTCAAGGCTTCCATTCAAAAATCTAGAGCAATCCCATTGGCTGCTGTAGCAAACAAACTTTaGTTCTCCGGTGCTAAGCTT +
Preference number: 4 (lower is better)
Translates to: FQHVKASIQKSRAIPLAAVANKL*FSGAKL
Trigger: AAGCTTAGCACCGGAGAAGCAAAGTTTGTTTGCTAC...AGCAGCCAATGGGATTGCTCTAGATTTTTGAATGGAAGCCTTGACATGCTGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR GCA 90 bp AATTTACTGTGGCACAGAAAGTCCTGCCAATTCCTAAGTGCCCTAAGTAGTTTCGTAGCAAACAAACTTTaGTTCTCCGGTGCTAAGCTT +
Preference number: 4 (lower is better)
Translates to: NLLWHRKSCQFLSALSSFVANKL*FSGAKL
Trigger: AAGCTTAGCACCGGAGAAGCAAAGTTTGTTTGCTAC...GAAACTACTTAGGGCACTTAGGAATTGGCAGGACTTTCTGTGCCACAGTAAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327171.7
ENST00000396509.6
ENST00000544523.5
ENST00000559454.5
ENST00000560031.6
ENST00000560119.5
CDS-3UTR GCA 90 bp GGACAATATTTCATAAGCAATGTATGGTGGCACACCCAAATTACAGTGGCAGGAGTAGCAAACAAACTTTaGTTCTCCGGTGCTAAGCTT +
Preference number: 4 (lower is better)
Translates to: GQYFISNVWWHTQITVAGVANKL*FSGAKL
Trigger: AAGCTTAGCACCGGAGAAGCAAAGTTTGTTTGCTAC...TCCTGCCACTGTAATTTGGGTGTGCCACCATACATTGCTTATGAAATATTGTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR GCA 90 bp TCCGAAGCTGAAATTGAGAGAGAATGTGTGGCATCACTATCGTCATCATCATCAACATACCTGCATACCTaGTTTACAATGGGGTGCATA +
Preference number: 4 (lower is better)
Translates to: SEAEIERECVASLSSSSSTYLHT*FTMGCI
Trigger: TATGCACCCCATTGTAAAGCAGGTATGCAGGTATGT...TGATGATGATGACGATAGTGATGCCACACATTCTCTCTCAATTTCAGCTTCGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR GCA 90 bp TTTCAGCATGTCAAGGCTTCCATTCAAAAATCTAGAGCAATCCCATTGGCTGCTAGAAAGCCAGTCATTTaGCATCACCAGCCAAACATT +
Preference number: 4 (lower is better)
Translates to: FQHVKASIQKSRAIPLAARKPVI*HHQPNI
Trigger: AATGTTTGGCTGGTGATGGCAAATGACTGGCTTTCT...AGCAGCCAATGGGATTGCTCTAGATTTTTGAATGGAAGCCTTGACATGCTGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR GCA 90 bp GGACAATATTTCATAAGCAATGTATGGTGGCACACCCAAATTACAGTGGCAGGACATCTTTTAGGGCCATaGTCAAAGTCCATTTACTGC +
Preference number: 4 (lower is better)
Translates to: GQYFISNVWWHTQITVAGHLLGP*SKSIYC
Trigger: GCAGTAAATGGACTTTGAGCATGGCCCTAAAAGATG...TCCTGCCACTGTAATTTGGGTGTGCCACCATACATTGCTTATGAAATATTGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR GCA 90 bp CACATACCTGCATACCTGCTTTACAATGGGGTGCATATATACAAACAAGCTTTGTGCTCATCTGCAGTGTaGACTCCACAGCTTTTAAAC +
Preference number: 4 (lower is better)
Translates to: HIPAYLLYNGVHIYKQALCSSAV*TPQLLN
Trigger: GTTTAAAAGCTGTGGAGTGCACACTGCAGATGAGCA...CAAAGCTTGTTTGTATATATGCACCCCATTGTAAAGCAGGTATGCAGGTATGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR GCA 90 bp AATTTACTGTGGCACAGAAAGTCCTGCCAATTCCTAAGTGCCCTAAGTAGTTTCCAAACTATATACATCTaGAGACCAGATGTGGCCCAT +
Preference number: 4 (lower is better)
Translates to: NLLWHRKSCQFLSALSSFQTIYI*RPDVAH
Trigger: ATGGGCCACATCTGGTCTGCAGATGTATATAGTTTG...GAAACTACTTAGGGCACTTAGGAATTGGCAGGACTTTCTGTGCCACAGTAAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CCA 90 bp TGCCAATGTAACGCTCACTCTTGGCACAGATTTCTGCAAGTTCCACCTTGGATATATGTTGACTCTTCCTaGTGCTCGAACATAAAACTT +
Preference number: 4 (lower is better)
Translates to: CQCNAHSWHRFLQVPPWIYVDSS*CSNIKL
Trigger: AAGTTTTATGTTCGAGCACCAGGAAGAGTCAACATA...TATCCAAGGTGGAACTTGCAGAAATCTGTGCCAAGAGTGAGCGTTACATTGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000559208.5
ENST00000559423.5
ENST00000559883.5
ENST00000560119.5
CDS-3UTR CCA 90 bp TGGCCAGTTGGAGAGCGTACGTTTTCACAGGTTCTACAGCTATTAGCACATCTTTATGTTGACTCTTCCTaGTGCTCGAACATAAAACTT +
Preference number: 4 (lower is better)
Translates to: WPVGERTFSQVLQLLAHLYVDSS*CSNIKL
Trigger: AAGTTTTATGTTCGAGCACCAGGAAGAGTCAACATA...AAGATGTGCTAATAGCTGTAGAACCTGTGAAAACGTACGCTCTCCAACTGGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000558775.5
ENST00000559883.5
ENST00000559963.5
ENST00000561074.5
CDS-3UTR CCA 90 bp AATTTACTGTGGCACAGAAAGTCCTGCCAATTCCTAAGTGCCCTAAGTAGTTTCTTTGTATTGGCCAGTTaGAGAGCGTACGTTTTCACA +
Preference number: 4 (lower is better)
Translates to: NLLWHRKSCQFLSALSSFFVLAS*RAYVFT
Trigger: TGTGAAAACGTACGCTCTCCAACTGGCCAATACAAA...GAAACTACTTAGGGCACTTAGGAATTGGCAGGACTTTCTGTGCCACAGTAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327171.7
ENST00000396509.6
ENST00000544523.5
ENST00000559454.5
ENST00000560031.6
ENST00000560119.5
CDS-3UTR CCA 90 bp ATACAAGGGATTTGTATTGGCCAGTTGGAGAGCGTACGTTTTCACAGGTTCTACTGTGCCACAAAGGCTTaGTTTTATCAATCTGGATGT +
Preference number: 4 (lower is better)
Translates to: IQGICIGQLESVRFHRFYCATKA*FYQSGC
Trigger: ACATCCAGATTGATAAAACCAAGCCTTTGTGGCACA...GTAGAACCTGTGAAAACGTACGCTCTCCAACTGGCCAATACAAATCCCTTGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000558775.5
ENST00000559883.5
ENST00000559963.5
CDS-3UTR CCA 90 bp TACCAGGCAGTTCATTCCAGTCAGGTTACTAAGACCAAAGTGTTCCTGAATTCCTGTGCCACAAAGGCTTaGTTTTATCAATCTGGATGT +
Preference number: 4 (lower is better)
Translates to: YQAVHSSQVTKTKVFLNSCATKA*FYQSGC
Trigger: ACATCCAGATTGATAAAACCAAGCCTTTGTGGCACA...GGAATTCAGGAACACTTTGGTCTTAGTAACCTGACTGGAATGAACTGCCTGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000558775.5
ENST00000558956.5
ENST00000559208.5
ENST00000559423.5
ENST00000559883.5
ENST00000559963.5
ENST00000560119.5
CDS-3UTR CCA 90 bp AATTTACTGTGGCACAGAAAGTCCTGCCAATTCCTAAGTGCCCTAAGTAGTTTCTGTAACGCTCACTCTTaGCACAGATTTCTGCAAGTT +
Preference number: 4 (lower is better)
Translates to: NLLWHRKSCQFLSALSSFCNAHS*HRFLQV
Trigger: AACTTGCAGAAATCTGTGCCAAGAGTGAGCGTTACA...GAAACTACTTAGGGCACTTAGGAATTGGCAGGACTTTCTGTGCCACAGTAAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327171.7
ENST00000396509.6
ENST00000544523.5
ENST00000559454.5
ENST00000560031.6
ENST00000560119.5
CDS-3UTR CCA 90 bp TCCGAAGCTGAAATTGAGAGAGAATGTGTGGCATCACTATCGTCATCATCATCATGTAACGCTCACTCTTaGCACAGATTTCTGCAAGTT +
Preference number: 4 (lower is better)
Translates to: SEAEIERECVASLSSSSSCNAHS*HRFLQV
Trigger: AACTTGCAGAAATCTGTGCCAAGAGTGAGCGTTACA...TGATGATGATGACGATAGTGATGCCACACATTCTCTCTCAATTTCAGCTTCGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CCA 90 bp AATTTACTGTGGCACAGAAAGTCCTGCCAATTCCTAAGTGCCCTAAGTAGTTTCAGAAATGATATAGACTaGTCCATGCCTCCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: NLLWHRKSCQFLSALSSFRNDID*SMPPPS
Trigger: TGAAGGAGGAGGCATGGACCAGTCTATATCATTTCT...GAAACTACTTAGGGCACTTAGGAATTGGCAGGACTTTCTGTGCCACAGTAAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327171.7
ENST00000396509.6
ENST00000544523.5
ENST00000559454.5
ENST00000560031.6
ENST00000560119.5
CDS-3UTR CCA 90 bp CACATACCTGCATACCTGCTTTACAATGGGGTGCATATATACAAACAAGCTTTGTCTCCACACAACTGTTaGCAATCACAAACACTGCTC +
Preference number: 4 (lower is better)
Translates to: HIPAYLLYNGVHIYKQALSPHNC*QSQTLL
Trigger: GAGCAGTGTTTGTGATTGCCAACAGTTGTGTGGAGA...CAAAGCTTGTTTGTATATATGCACCCCATTGTAAAGCAGGTATGCAGGTATGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CCA 90 bp ACACAACTGTTGGCAATCACAAACACTGCTCCACTTGGGAGTTTTACATCGGTTACCCTGATATTGAAATaGGAAGTTGCTGCCTTATTC +
Preference number: 4 (lower is better)
Translates to: TQLLAITNTAPLGSFTSVTLILK*EVAALF
Trigger: GAATAAGGCAGCAACTTCCCATTTCAATATCAGGGT...AACCGATGTAAAACTCCCAAGTGGAGCAGTGTTTGTGATTGCCAACAGTTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559423.5
ENST00000560119.5
CDS-3UTR CCA 90 bp TATGCAAGTCTGATGATAACTCAAAAGAGTAGAAGAGCCTTACTGCATGTACTTTTTGGACTCAGGATTTaGGTTCGGAGTTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: YASLMITQKSRRALLHVLFGLRI*VRSSSR
Trigger: CCTGGAGGAACTCCGAACCCAAATCCTGAGTCCAAA...AAGTACATGCAGTAAGGCTCTTCTACTCTTTTGAGTTATCATCAGACTTGCATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558399.5
CDS-3UTR CCA 90 bp TTATTTTCTTCCTCTTACAGTCGCACTATAGTAGTACTGGTCCAGAGTTTAATCCATATCTTCTTAAACTaGAGCACTCGCGCAGCCTCG +
Preference number: 4 (lower is better)
Translates to: LFSSSYSRTIVVLVQSLIHIFLN*STRAAS
Trigger: CGAGGCTGCGCGAGTGCTCCAGTTTAAGAAGATATG...GATTAAACTCTGGACCAGTACTACTATAGTGCGACTGTAAGAGGAAGAAAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558399.5
ENST00000559580.5
CDS-3UTR CCA 90 bp ATCTTATTCTTCACTACATACCAAAGCAAAGCCTTCACTCTCACTGAGCCTCCTCTTGGAAGTGCCTCTTaGATTAGAGAGGTATTTGAG +
Preference number: 4 (lower is better)
Translates to: ILFFTTYQSKAFTLTEPPLGSAS*IREVFE
Trigger: CTCAAATACCTCTCTAATCCAAGAGGCACTTCCAAG...AGGAGGCTCAGTGAGAGTGAAGGCTTTGCTTTGGTATGTAGTGAAGAATAAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CCA 90 bp AATTTACTGTGGCACAGAAAGTCCTGCCAATTCCTAAGTGCCCTAAGTAGTTTCAATATGTCTGAATGCTaGACAATTGGAGGTCAGGGA +
Preference number: 4 (lower is better)
Translates to: NLLWHRKSCQFLSALSSFNMSEC*TIGGQG
Trigger: TCCCTGACCTCCAATTGTCCAGCATTCAGACATATT...GAAACTACTTAGGGCACTTAGGAATTGGCAGGACTTTCTGTGCCACAGTAAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CCA 90 bp TTTGCCTATACCCATAGGCTTTGCTCATCTGCAGTGTGCACTCCACAGCTTTTAGCTTCTCTTTACTTATaGGCATTCTTGTTAAGTCTG +
Preference number: 4 (lower is better)
Translates to: FAYTHRLCSSAVCTPQLLASLYL*AFLLSL
Trigger: CAGACTTAACAAGAATGCCCATAAGTAAAGAGAAGC...TAAAAGCTGTGGAGTGCACACTGCAGATGAGCAAAGCCTATGGGTATAGGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CCA 90 bp CAAGCAAAGGCTACCAAGAAACCTCATGAAGTGAAACAGGACTTTGAGAAGTTCACACCCAAATTACAGTaGCAGGAGAGGATACATTCT +
Preference number: 4 (lower is better)
Translates to: QAKATKKPHEVKQDFEKFTPKLQ*QERIHS
Trigger: AGAATGTATCCTCTCCTGCCACTGTAATTTGGGTGT...GAACTTCTCAAAGTCCTGTTTCACTTCATGAGGTTTCTTGGTAGCCTTTGCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CCA 90 bp CTCTTACAGTCGCACTATAGTAGTACTGGTCCAGAGTTTAATCGTGTTCTCTTCTTAAGATGCATGAGCTaGCTGGTATTTCCAAAGCAC +
Preference number: 4 (lower is better)
Translates to: LLQSHYSSTGPEFNRVLFLRCMS*LVFPKH
Trigger: GTGCTTTGGAAATACCAGCCAGCTCATGCATCTTAA...GAAGAGAACACGATTAAACTCTGGACCAGTACTACTATAGTGCGACTGTAAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558399.5
ENST00000559580.5
3UTR CAA 72 bp CCAGAATATCTGATACTGCTTGTACAATCTCCTGATTaGGAGCCCAAGTTTTTAGTCATTCTGTGGGCCAAA +
Preference number: 4 (lower is better)
Translates to: PEYLILLVQSPD*EPKFLVILWAK
Trigger: TTTGGCCCACAGAATGACTAAAAACTTGGGCTCCAAATCAGGAGATTGTACAAGCAGTATCAGATATTCTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR TCA 90 bp TTTTCTTCCTCTTACAGTCGCACTATAGTAGTACTGGTCCAGAGTTTAATCGTGAAGATGAGCACATCTTaGGTGTTTGGACTCAGGATT +
Preference number: 4 (lower is better)
Translates to: FSSSYSRTIVVLVQSLIVKMSTS*VFGLRI
Trigger: AATCCTGAGTCCAAACACTCAAGATGTGCTCATCTT...CACGATTAAACTCTGGACCAGTACTACTATAGTGCGACTGTAAGAGGAAGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558399.5
ENST00000559580.5
CDS-3UTR TCA 90 bp AATTTACTGTGGCACAGAAAGTCCTGCCAATTCCTAAGTGCCCTAAGTAGTTTCAGATCTGTCCAAGCATaGTCTTGGCTCTTAATAGTA +
Preference number: 4 (lower is better)
Translates to: NLLWHRKSCQFLSALSSFRSVQA*SWLLIV
Trigger: TACTATTAAGAGCCAAGATCATGCTTGGACAGATCT...GAAACTACTTAGGGCACTTAGGAATTGGCAGGACTTTCTGTGCCACAGTAAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327171.7
ENST00000396509.6
ENST00000544523.5
ENST00000559454.5
ENST00000560031.6
ENST00000560119.5
CDS-3UTR TCA 90 bp TTTCAGCATGTCAAGGCTTCCATTCAAAAATCTAGAGCAATCCCATTGGCTGCTAGAAACCTCATGAAGTaGAACAGGACTTTGAGAAGT +
Preference number: 4 (lower is better)
Translates to: FQHVKASIQKSRAIPLAARNLMK*NRTLRS
Trigger: ACTTCTCAAAGTCCTGTTTCACTTCATGAGGTTTCT...AGCAGCCAATGGGATTGCTCTAGATTTTTGAATGGAAGCCTTGACATGCTGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR GCA 90 bp AATTTACTGTGGCACAGAAAGTCCTGCCAATTCCTAAGTGCCCTAAGTAGTTTCATTGAAATGGGAAGTTaGTGCCTTATTCATCTCCAC +
Preference number: 4 (lower is better)
Translates to: NLLWHRKSCQFLSALSSFIEMGS*CLIHLH
Trigger: GTGGAGATGAATAAGGCAGCAACTTCCCATTTCAAT...GAAACTACTTAGGGCACTTAGGAATTGGCAGGACTTTCTGTGCCACAGTAAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327171.7
ENST00000396509.6
ENST00000544523.5
ENST00000559454.5
ENST00000560031.6
ENST00000560119.5
CDS-3UTR GCA 90 bp ATGCCCTGTAGAAATGTTGGACAAGTAGTATCAGATATTCCACCACTCAGTAATGCTGTACACATGCTTTaGCCGCTGATAGAGTTTGAA +
Preference number: 4 (lower is better)
Translates to: MPCRNVGQVVSDIPPLSNAVHML*PLIEFE
Trigger: TTCAAACTCTATCAGCGGGCAAAGCATGTGTACAGC...ATTACTGAGTGGTGGAATATCTGATACTACTTGTCCAACATTTCTACAGGGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR GCA 90 bp AGTCGCACTATAGTAGTACTGGTCCAGAGTTTAATCGTGTTCTCTTCAATTTTGGCTGTACACATGCTTTaGCCGCTGATAGAGTTTGAA +
Preference number: 4 (lower is better)
Translates to: SRTIVVLVQSLIVFSSILAVHML*PLIEFE
Trigger: TTCAAACTCTATCAGCGGGCAAAGCATGTGTACAGC...CAAAATTGAAGAGAACACGATTAAACTCTGGACCAGTACTACTATAGTGCGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558399.5
ENST00000559580.5
CDS-3UTR GCA 90 bp CAGTCGCACTATAGTAGTACTGGTCCAGAGTTTAATCGTGTTCTCTTCAATTTTGCTGTACACATGCTTTaGCCGCTGATAGAGTTTGAA +
Preference number: 4 (lower is better)
Translates to: QSHYSSTGPEFNRVLFNFAVHML*PLIEFE
Trigger: TTCAAACTCTATCAGCGGGCAAAGCATGTGTACAGC...AAAATTGAAGAGAACACGATTAAACTCTGGACCAGTACTACTATAGTGCGACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558399.5
ENST00000559580.5
CDS-3UTR GCA 90 bp ATCTTATTCTTCACTACATACCAAAGCAAAGCCTTCACTCTCACTGAGCCTCCTCCAGCCAAACATTTCTaGCCACTCTTGATATACATA +
Preference number: 4 (lower is better)
Translates to: ILFFTTYQSKAFTLTEPPPAKHF*PLLIYI
Trigger: TATGTATATCAAGAGTGGGCAGAAATGTTTGGCTGG...AGGAGGCTCAGTGAGAGTGAAGGCTTTGCTTTGGTATGTAGTGAAGAATAAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR GCA 90 bp CACATACCTGCATACCTGCTTTACAATGGGGTGCATATATACAAACAAGCTTTGCATCTTTTAGGGCCATaGTCAAAGTCCATTTACTGC +
Preference number: 4 (lower is better)
Translates to: HIPAYLLYNGVHIYKQALHLLGP*SKSIYC
Trigger: GCAGTAAATGGACTTTGAGCATGGCCCTAAAAGATG...CAAAGCTTGTTTGTATATATGCACCCCATTGTAAAGCAGGTATGCAGGTATGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR GCA 90 bp ATCTTATTCTTCACTACATACCAAAGCAAAGCCTTCACTCTCACTGAGCCTCCTATAGGAAAACAACAGTaGAAGTGTCCTGATAAAGGG +
Preference number: 4 (lower is better)
Translates to: ILFFTTYQSKAFTLTEPPIGKQQ*KCPDKG
Trigger: CCCTTTATCAGGACACTTGCACTGTTGTTTTCCTAT...AGGAGGCTCAGTGAGAGTGAAGGCTTTGCTTTGGTATGTAGTGAAGAATAAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CCA 90 bp AGAACTTGGTGGGATATTTCCATCTACCAGGCAGTTCATTCCAGTCAGGTTACTTATGTTGACTCTTCCTaGTGCTCGAACATAAAACTT +
Preference number: 4 (lower is better)
Translates to: RTWWDISIYQAVHSSQVTYVDSS*CSNIKL
Trigger: AAGTTTTATGTTCGAGCACCAGGAAGAGTCAACATA...AGTAACCTGACTGGAATGAACTGCCTGGTAGATGGAAATATCCCACCAAGTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558775.5
ENST00000559208.5
ENST00000559423.5
ENST00000559883.5
ENST00000559963.5
ENST00000560119.5
CDS-3UTR CCA 90 bp CTTGGTTTTATCAATCTGGATGTTATTAGCACTAGTACTGAAGTCCGGATACAAACAAGGGATTTGTATTaGCCAGTTGGAGAGCGTACG +
Preference number: 4 (lower is better)
Translates to: LGFINLDVISTSTEVRIQTRDLY*PVGERT
Trigger: CGTACGCTCTCCAACTGGCCAATACAAATCCCTTGT...TTGTATCCGGACTTCAGTACTAGTGCTAATAACATCCAGATTGATAAAACCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558775.5
ENST00000559883.5
ENST00000559963.5
CDS-3UTR CCA 90 bp AATTTACTGTGGCACAGAAAGTCCTGCCAATTCCTAAGTGCCCTAAGTAGTTTCTGTGCCACAAAGGCTTaGTTTTATCAATCTGGATGT +
Preference number: 4 (lower is better)
Translates to: NLLWHRKSCQFLSALSSFCATKA*FYQSGC
Trigger: ACATCCAGATTGATAAAACCAAGCCTTTGTGGCACA...GAAACTACTTAGGGCACTTAGGAATTGGCAGGACTTTCTGTGCCACAGTAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327171.7
ENST00000396509.6
ENST00000544523.5
ENST00000559454.5
ENST00000560031.6
ENST00000560119.5
CDS-3UTR CCA 90 bp TTGAAATGGGAAGTTGCTGCCTTATTCATCTCCACACAACTGTTGGCAATCACATGTGCCACAAAGGCTTaGTTTTATCAATCTGGATGT +
Preference number: 4 (lower is better)
Translates to: LKWEVAALFISTQLLAITCATKA*FYQSGC
Trigger: ACATCCAGATTGATAAAACCAAGCCTTTGTGGCACA...TGTGATTGCCAACAGTTGTGTGGAGATGAATAAGGCAGCAACTTCCCATTTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559423.5
ENST00000560119.5
CDS-3UTR CCA 90 bp ATGCCCTGTAGAAATGTTGGACAAGTAGTATCAGATATTCCACCACTCAGTAATTCTCCACACAACTGTTaGCAATCACAAACACTGCTC +
Preference number: 4 (lower is better)
Translates to: MPCRNVGQVVSDIPPLSNSPHNC*QSQTLL
Trigger: GAGCAGTGTTTGTGATTGCCAACAGTTGTGTGGAGA...ATTACTGAGTGGTGGAATATCTGATACTACTTGTCCAACATTTCTACAGGGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CCA 90 bp GGACAATATTTCATAAGCAATGTATGGTGGCACACCCAAATTACAGTGGCAGGAACCCTGATATTGAAATaGGAAGTTGCTGCCTTATTC +
Preference number: 4 (lower is better)
Translates to: GQYFISNVWWHTQITVAGTLILK*EVAALF
Trigger: GAATAAGGCAGCAACTTCCCATTTCAATATCAGGGT...TCCTGCCACTGTAATTTGGGTGTGCCACCATACATTGCTTATGAAATATTGTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CCA 90 bp AATTTACTGTGGCACAGAAAGTCCTGCCAATTCCTAAGTGCCCTAAGTAGTTTCACCCTGATATTGAAATaGGAAGTTGCTGCCTTATTC +
Preference number: 4 (lower is better)
Translates to: NLLWHRKSCQFLSALSSFTLILK*EVAALF
Trigger: GAATAAGGCAGCAACTTCCCATTTCAATATCAGGGT...GAAACTACTTAGGGCACTTAGGAATTGGCAGGACTTTCTGTGCCACAGTAAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327171.7
ENST00000396509.6
ENST00000544523.5
ENST00000559454.5
ENST00000560031.6
ENST00000560119.5
CDS-3UTR CCA 90 bp TATGGTGGCACACCCAAATTACAGTGGCAGGAGAGGATACATTCTTGTTACTTAACCCTGATATTGAAATaGGAAGTTGCTGCCTTATTC +
Preference number: 4 (lower is better)
Translates to: YGGTPKLQWQERIHSCYLTLILK*EVAALF
Trigger: GAATAAGGCAGCAACTTCCCATTTCAATATCAGGGT...TAAGTAACAAGAATGTATCCTCTCCTGCCACTGTAATTTGGGTGTGCCACCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CCA 90 bp TCGCACTATAGTAGTACTGGTCCAGAGTTTAATCGTGTTCTCTTCAATTTTGGACACATCTTGAGTGTTTaGACTCAGGATTTGGGTTCG +
Preference number: 4 (lower is better)
Translates to: SHYSSTGPEFNRVLFNFGHILSV*TQDLGS
Trigger: CGAACCCAAATCCTGAGTCCAAACACTCAAGATGTG...TCCAAAATTGAAGAGAACACGATTAAACTCTGGACCAGTACTACTATAGTGCGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558399.5
ENST00000559580.5
CDS-3UTR CCA 90 bp TATAGTAGTACTGGTCCAGAGTTTAATCGTGTTCTCTTCAATTTTGGAGGTCAGCACATCTTGAGTGTTTaGACTCAGGATTTGGGTTCG +
Preference number: 4 (lower is better)
Translates to: YSSTGPEFNRVLFNFGGQHILSV*TQDLGS
Trigger: CGAACCCAAATCCTGAGTCCAAACACTCAAGATGTG...CTGACCTCCAAAATTGAAGAGAACACGATTAAACTCTGGACCAGTACTACTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558399.5
ENST00000559580.5
CDS-3UTR CCA 90 bp ATGCCCTGTAGAAATGTTGGACAAGTAGTATCAGATATTCCACCACTCAGTAATGCTGTGTTAGATGAATaGTCCCTGCCCTCAATTATC +
Preference number: 4 (lower is better)
Translates to: MPCRNVGQVVSDIPPLSNAVLDE*SLPSII
Trigger: GATAATTGAGGGCAGGGACCATTCATCTAACACAGC...ATTACTGAGTGGTGGAATATCTGATACTACTTGTCCAACATTTCTACAGGGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR TCA 90 bp TATAGTAGTACTGGTCCAGAGTTTAATCGTGTTCTCTTCAATTTTGGAGGTCAGAAGATGAGCACATCTTaGGTGTTTGGACTCAGGATT +
Preference number: 4 (lower is better)
Translates to: YSSTGPEFNRVLFNFGGQKMSTS*VFGLRI
Trigger: AATCCTGAGTCCAAACACTCAAGATGTGCTCATCTT...CTGACCTCCAAAATTGAAGAGAACACGATTAAACTCTGGACCAGTACTACTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558399.5
ENST00000559580.5
CDS-3UTR TCA 90 bp CACATACCTGCATACCTGCTTTACAATGGGGTGCATATATACAAACAAGCTTTGAGATCTGTCCAAGCATaGTCTTGGCTCTTAATAGTA +
Preference number: 4 (lower is better)
Translates to: HIPAYLLYNGVHIYKQALRSVQA*SWLLIV
Trigger: TACTATTAAGAGCCAAGATCATGCTTGGACAGATCT...CAAAGCTTGTTTGTATATATGCACCCCATTGTAAAGCAGGTATGCAGGTATGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR TCA 90 bp CACATACCTGCATACCTGCTTTACAATGGGGTGCATATATACAAACAAGCTTTGATTTCTGCCCACTCTTaGTATACATACAGAGATACC +
Preference number: 4 (lower is better)
Translates to: HIPAYLLYNGVHIYKQALISAHS*YTYRDT
Trigger: GGTATCTCTGTATGTATATCAAGAGTGGGCAGAAAT...CAAAGCTTGTTTGTATATATGCACCCCATTGTAAAGCAGGTATGCAGGTATGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR TCA 90 bp CACATACCTGCATACCTGCTTTACAATGGGGTGCATATATACAAACAAGCTTTGTTTACTCACCTTTTGTaGAGAAGAAATCACCTGGTG +
Preference number: 4 (lower is better)
Translates to: HIPAYLLYNGVHIYKQALFTHLL*RRNHLV
Trigger: CACCAGGTGATTTCTTCTTCACAAAAGGTGAGTAAA...CAAAGCTTGTTTGTATATATGCACCCCATTGTAAAGCAGGTATGCAGGTATGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR TCA 90 bp TCCGAAGCTGAAATTGAGAGAGAATGTGTGGCATCACTATCGTCATCATCATCAGTAATCCAGAATATCTaGTACTGCTTGTACAATCTC +
Preference number: 4 (lower is better)
Translates to: SEAEIERECVASLSSSSSVIQNI*YCLYNL
Trigger: GAGATTGTACAAGCAGTATCAGATATTCTGGATTAC...TGATGATGATGACGATAGTGATGCCACACATTCTCTCTCAATTTCAGCTTCGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR GCA 90 bp CACATACCTGCATACCTGCTTTACAATGGGGTGCATATATACAAACAAGCTTTGATTGAAATGGGAAGTTaGTGCCTTATTCATCTCCAC +
Preference number: 4 (lower is better)
Translates to: HIPAYLLYNGVHIYKQALIEMGS*CLIHLH
Trigger: GTGGAGATGAATAAGGCAGCAACTTCCCATTTCAAT...CAAAGCTTGTTTGTATATATGCACCCCATTGTAAAGCAGGTATGCAGGTATGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR GCA 90 bp GGACAATATTTCATAAGCAATGTATGGTGGCACACCCAAATTACAGTGGCAGGAAGTACTTTGTCCCATTaGAAGCTTTTGTATTTAGCC +
Preference number: 4 (lower is better)
Translates to: GQYFISNVWWHTQITVAGSTLSH*KLLYLA
Trigger: GGCTAAATACAAAAGCTTGCAATGGGACAAAGTACT...TCCTGCCACTGTAATTTGGGTGTGCCACCATACATTGCTTATGAAATATTGTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR GCA 90 bp AATTTACTGTGGCACAGAAAGTCCTGCCAATTCCTAAGTGCCCTAAGTAGTTTCAGTACTTTGTCCCATTaGAAGCTTTTGTATTTAGCC +
Preference number: 4 (lower is better)
Translates to: NLLWHRKSCQFLSALSSFSTLSH*KLLYLA
Trigger: GGCTAAATACAAAAGCTTGCAATGGGACAAAGTACT...GAAACTACTTAGGGCACTTAGGAATTGGCAGGACTTTCTGTGCCACAGTAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327171.7
ENST00000396509.6
ENST00000544523.5
ENST00000559454.5
ENST00000560031.6
ENST00000560119.5
CDS-3UTR GCA 90 bp TCTTCCTCTTACAGTCGCACTATAGTAGTACTGGTCCAGAGTTTAATCGTGTTCAGTACTTTGTCCCATTaGAAGCTTTTGTATTTAGCC +
Preference number: 4 (lower is better)
Translates to: SSSYSRTIVVLVQSLIVFSTLSH*KLLYLA
Trigger: GGCTAAATACAAAAGCTTGCAATGGGACAAAGTACT...GAACACGATTAAACTCTGGACCAGTACTACTATAGTGCGACTGTAAGAGGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558399.5
CDS-3UTR GCA 90 bp TATGGTGGCACACCCAAATTACAGTGGCAGGAGAGGATACATTCTTGTTACTTAGACCATGTTTTCAGGTaGTTCTTCACATATCTTCTT +
Preference number: 4 (lower is better)
Translates to: YGGTPKLQWQERIHSCYLDHVFR*FFTYLL
Trigger: AAGAAGATATGTGAAGAAGCACCTGAAAACATGGTC...TAAGTAACAAGAATGTATCCTCTCCTGCCACTGTAATTTGGGTGTGCCACCATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR GCA 90 bp AATTTACTGTGGCACAGAAAGTCCTGCCAATTCCTAAGTGCCCTAAGTAGTTTCGACCATGTTTTCAGGTaGTTCTTCACATATCTTCTT +
Preference number: 4 (lower is better)
Translates to: NLLWHRKSCQFLSALSSFDHVFR*FFTYLL
Trigger: AAGAAGATATGTGAAGAAGCACCTGAAAACATGGTC...GAAACTACTTAGGGCACTTAGGAATTGGCAGGACTTTCTGTGCCACAGTAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327171.7
ENST00000396509.6
ENST00000544523.5
ENST00000559454.5
ENST00000560031.6
ENST00000560119.5
CDS-3UTR GCA 90 bp TTTCAGCATGTCAAGGCTTCCATTCAAAAATCTAGAGCAATCCCATTGGCTGCTGACCATGTTTTCAGGTaGTTCTTCACATATCTTCTT +
Preference number: 4 (lower is better)
Translates to: FQHVKASIQKSRAIPLAADHVFR*FFTYLL
Trigger: AAGAAGATATGTGAAGAAGCACCTGAAAACATGGTC...AGCAGCCAATGGGATTGCTCTAGATTTTTGAATGGAAGCCTTGACATGCTGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR GCA 90 bp AAATGGGAAGTTGCTGCCTTATTCATCTCCACACAACTGTTGGCAATCACAAACGACCATGTTTTCAGGTaGTTCTTCACATATCTTCTT +
Preference number: 4 (lower is better)
Translates to: KWEVAALFISTQLLAITNDHVFR*FFTYLL
Trigger: AAGAAGATATGTGAAGAAGCACCTGAAAACATGGTC...GTTTGTGATTGCCAACAGTTGTGTGGAGATGAATAAGGCAGCAACTTCCCATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560119.5
CDS-3UTR GCA 90 bp AGTCGCACTATAGTAGTACTGGTCCAGAGTTTAATCGTGTTCTCTTCAATTTTGGTAGCAAACAAACTTTaGTTCTCCGGTGCTAAGCTT +
Preference number: 4 (lower is better)
Translates to: SRTIVVLVQSLIVFSSILVANKL*FSGAKL
Trigger: AAGCTTAGCACCGGAGAAGCAAAGTTTGTTTGCTAC...CAAAATTGAAGAGAACACGATTAAACTCTGGACCAGTACTACTATAGTGCGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559580.5
CDS-3UTR CCA 90 bp CAAGCAAAGGCTACCAAGAAACCTCATGAAGTGAAACAGGACTTTGAGAAGTTCTATGTTGACTCTTCCTaGTGCTCGAACATAAAACTT +
Preference number: 4 (lower is better)
Translates to: QAKATKKPHEVKQDFEKFYVDSS*CSNIKL
Trigger: AAGTTTTATGTTCGAGCACCAGGAAGAGTCAACATA...GAACTTCTCAAAGTCCTGTTTCACTTCATGAGGTTTCTTGGTAGCCTTTGCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CCA 90 bp AATTTACTGTGGCACAGAAAGTCCTGCCAATTCCTAAGTGCCCTAAGTAGTTTCTATGTTGACTCTTCCTaGTGCTCGAACATAAAACTT +
Preference number: 4 (lower is better)
Translates to: NLLWHRKSCQFLSALSSFYVDSS*CSNIKL
Trigger: AAGTTTTATGTTCGAGCACCAGGAAGAGTCAACATA...GAAACTACTTAGGGCACTTAGGAATTGGCAGGACTTTCTGTGCCACAGTAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327171.7
ENST00000396509.6
ENST00000544523.5
ENST00000559454.5
ENST00000560031.6
ENST00000560119.5
CDS-3UTR CCA 90 bp CTCTCCTATTATGTTGACTCTTCCTGGTGCTCGAACATAAAACTTGGGAATAGATGTGCCACAAAGGCTTaGTTTTATCAATCTGGATGT +
Preference number: 4 (lower is better)
Translates to: LSYYVDSSWCSNIKLGNRCATKA*FYQSGC
Trigger: ACATCCAGATTGATAAAACCAAGCCTTTGTGGCACA...TCTATTCCCAAGTTTTATGTTCGAGCACCAGGAAGAGTCAACATAATAGGAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559883.5
ENST00000559963.5
CDS-3UTR CCA 90 bp ATGCCCTGTAGAAATGTTGGACAAGTAGTATCAGATATTCCACCACTCAGTAATAGAAATGATATAGACTaGTCCATGCCTCCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: MPCRNVGQVVSDIPPLSNRNDID*SMPPPS
Trigger: TGAAGGAGGAGGCATGGACCAGTCTATATCATTTCT...ATTACTGAGTGGTGGAATATCTGATACTACTTGTCCAACATTTCTACAGGGCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CCA 90 bp TATGGTGGCACACCCAAATTACAGTGGCAGGAGAGGATACATTCTTGTTACTTAGCTTCTCTTTACTTATaGGCATTCTTGTTAAGTCTG +
Preference number: 4 (lower is better)
Translates to: YGGTPKLQWQERIHSCYLASLYL*AFLLSL
Trigger: CAGACTTAACAAGAATGCCCATAAGTAAAGAGAAGC...TAAGTAACAAGAATGTATCCTCTCCTGCCACTGTAATTTGGGTGTGCCACCATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CCA 90 bp ATGCCCTGTAGAAATGTTGGACAAGTAGTATCAGATATTCCACCACTCAGTAATACACCCAAATTACAGTaGCAGGAGAGGATACATTCT +
Preference number: 4 (lower is better)
Translates to: MPCRNVGQVVSDIPPLSNTPKLQ*QERIHS
Trigger: AGAATGTATCCTCTCCTGCCACTGTAATTTGGGTGT...ATTACTGAGTGGTGGAATATCTGATACTACTTGTCCAACATTTCTACAGGGCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CCA 90 bp TCCGAAGCTGAAATTGAGAGAGAATGTGTGGCATCACTATCGTCATCATCATCATTCATAAGCAATGTATaGTGGCACACCCAAATTACA +
Preference number: 4 (lower is better)
Translates to: SEAEIERECVASLSSSSSFISNV*WHTQIT
Trigger: TGTAATTTGGGTGTGCCACCATACATTGCTTATGAA...TGATGATGATGACGATAGTGATGCCACACATTCTCTCTCAATTTCAGCTTCGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CCA 90 bp AATTTACTGTGGCACAGAAAGTCCTGCCAATTCCTAAGTGCCCTAAGTAGTTTCTTCATAAGCAATGTATaGTGGCACACCCAAATTACA +
Preference number: 4 (lower is better)
Translates to: NLLWHRKSCQFLSALSSFFISNV*WHTQIT
Trigger: TGTAATTTGGGTGTGCCACCATACATTGCTTATGAA...GAAACTACTTAGGGCACTTAGGAATTGGCAGGACTTTCTGTGCCACAGTAAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CCA 90 bp ACTATAGTAGTACTGGTCCAGAGTTTAATCGTGTTCTCTTCAATTTTGGAGGTCTTAAGATGCATGAGCTaGCTGGTATTTCCAAAGCAC +
Preference number: 4 (lower is better)
Translates to: TIVVLVQSLIVFSSILEVLRCMS*LVFPKH
Trigger: GTGCTTTGGAAATACCAGCCAGCTCATGCATCTTAA...GACCTCCAAAATTGAAGAGAACACGATTAAACTCTGGACCAGTACTACTATAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558399.5
ENST00000559580.5
CDS-3UTR CCA 90 bp GTAGTACTGGTCCAGAGTTTAATCGTGTTCTCTTCAATTTTGGAGGTCAGAGTCTGTTCTCTTCAATTTTaGAGGTCAGAGTCCATTGAT +
Preference number: 4 (lower is better)
Translates to: VVLVQSLIVFSSILEVRVCSLQF*RSESID
Trigger: ATCAATGGACTCTGACCTCCAAAATTGAAGAGAACA...GACTCTGACCTCCAAAATTGAAGAGAACACGATTAAACTCTGGACCAGTACTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558399.5
ENST00000559580.5
3UTR CAA 72 bp CATTTGCCATCACCAGCCAAACATTTCTGCCCACTCTaGATATACATACAGAGATACCCATCAATACCATTA +
Preference number: 4 (lower is better)
Translates to: HLPSPAKHFCPL*IYIQRYPSIPL
Trigger: TAATGGTATTGATGGGTATCTCTGTATGTATATCAAGAGTGGGCAGAAATGTTTGGCTGGTGATGGCAAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
3UTR CAA 72 bp ATCTTCTCTTTTGCTTCTCTTTACTTATGGGCATTCTaGTTAAGTCTGAAGGGCTTCTTCTCTCCCAACAGA +
Preference number: 4 (lower is better)
Translates to: IFSFASLYLWAF*LSLKGFFSPNR
Trigger: TCTGTTGGGAGAGAAGAAGCCCTTCAGACTTAACAAGAATGCCCATAAGTAAAGAGAAGCAAAAGAGAAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR TCA 90 bp CACATACCTGCATACCTGCTTTACAATGGGGTGCATATATACAAACAAGCTTTGGTAATCCAGAATATCTaGTACTGCTTGTACAATCTC +
Preference number: 4 (lower is better)
Translates to: HIPAYLLYNGVHIYKQALVIQNI*YCLYNL
Trigger: GAGATTGTACAAGCAGTATCAGATATTCTGGATTAC...CAAAGCTTGTTTGTATATATGCACCCCATTGTAAAGCAGGTATGCAGGTATGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR GCA 90 bp ATGCCCTGTAGAAATGTTGGACAAGTAGTATCAGATATTCCACCACTCAGTAATATTGAAATGGGAAGTTaGTGCCTTATTCATCTCCAC +
Preference number: 4 (lower is better)
Translates to: MPCRNVGQVVSDIPPLSNIEMGS*CLIHLH
Trigger: GTGGAGATGAATAAGGCAGCAACTTCCCATTTCAAT...ATTACTGAGTGGTGGAATATCTGATACTACTTGTCCAACATTTCTACAGGGCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR GCA 90 bp GTCCACATAAGAAATAGTTGTGCCACAAAGGCTTGGTTTTATCAATCTGGATGTATTGAAATGGGAAGTTaGTGCCTTATTCATCTCCAC +
Preference number: 4 (lower is better)
Translates to: VHIRNSCATKAWFYQSGCIEMGS*CLIHLH
Trigger: GTGGAGATGAATAAGGCAGCAACTTCCCATTTCAAT...ACATCCAGATTGATAAAACCAAGCCTTTGTGGCACAACTATTTCTTATGTGGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559423.5
ENST00000560119.5
CDS-3UTR GCA 90 bp ACTGGTCCAGAGTTTAATCGTGTTCTCTTCAATTTTGGAGGTCAGAGTCCATTGTGTCTATTGCCTATATaGAAGTCTGATGATAACTCA +
Preference number: 4 (lower is better)
Translates to: TGPEFNRVLFNFGGQSPLCLLPI*KSDDNS
Trigger: TGAGTTATCATCAGACTTGCATATAGGCAATAGACA...CAATGGACTCTGACCTCCAAAATTGAAGAGAACACGATTAAACTCTGGACCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558399.5
CDS-3UTR GCA 90 bp TCTTCCTCTTACAGTCGCACTATAGTAGTACTGGTCCAGAGTTTAATCGTGTTCCTGAATAATGTCTATTaGCTATATGCAAGTCTGATG +
Preference number: 4 (lower is better)
Translates to: SSSYSRTIVVLVQSLIVFLNNVY*LYASLM
Trigger: CATCAGACTTGCATATAGGCAATAGACATTATTCAG...GAACACGATTAAACTCTGGACCAGTACTACTATAGTGCGACTGTAAGAGGAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558399.5
CDS-3UTR CCA 90 bp ATATTTCCATCTACCAGGCAGTTCATTCCAGTCAGGTTACTAAGACCAAAGTGTTATGTTGACTCTTCCTaGTGCTCGAACATAAAACTT +
Preference number: 4 (lower is better)
Translates to: IFPSTRQFIPVRLLRPKCYVDSS*CSNIKL
Trigger: AAGTTTTATGTTCGAGCACCAGGAAGAGTCAACATA...ACACTTTGGTCTTAGTAACCTGACTGGAATGAACTGCCTGGTAGATGGAAATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558775.5
ENST00000559208.5
ENST00000559423.5
ENST00000559883.5
ENST00000559963.5
ENST00000560119.5
CDS-3UTR CCA 90 bp CACATACCTGCATACCTGCTTTACAATGGGGTGCATATATACAAACAAGCTTTGTATGTTGACTCTTCCTaGTGCTCGAACATAAAACTT +
Preference number: 4 (lower is better)
Translates to: HIPAYLLYNGVHIYKQALYVDSS*CSNIKL
Trigger: AAGTTTTATGTTCGAGCACCAGGAAGAGTCAACATA...CAAAGCTTGTTTGTATATATGCACCCCATTGTAAAGCAGGTATGCAGGTATGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CCA 90 bp TTTATCAATCTGGATGTTATTAGCACTAGTACTGAAGTCCGGATACAAGGGATTTTTGTATTGGCCAGTTaGAGAGCGTACGTTTTCACA +
Preference number: 4 (lower is better)
Translates to: FINLDVISTSTEVRIQGIFVLAS*RAYVFT
Trigger: TGTGAAAACGTACGCTCTCCAACTGGCCAATACAAA...AATCCCTTGTATCCGGACTTCAGTACTAGTGCTAATAACATCCAGATTGATAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000558775.5
ENST00000559883.5
ENST00000559963.5
CDS-3UTR CCA 90 bp GTCCACATAAGAAATAGTTGTGCCACAAAGGCTTGGTTTTATCAATCTGGATGTTGTGCCACAAAGGCTTaGTTTTATCAATCTGGATGT +
Preference number: 4 (lower is better)
Translates to: VHIRNSCATKAWFYQSGCCATKA*FYQSGC
Trigger: ACATCCAGATTGATAAAACCAAGCCTTTGTGGCACA...ACATCCAGATTGATAAAACCAAGCCTTTGTGGCACAACTATTTCTTATGTGGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000558775.5
ENST00000558956.5
ENST00000559208.5
ENST00000559423.5
ENST00000559883.5
ENST00000559963.5
ENST00000560119.5
CDS-3UTR CCA 90 bp GCAGGAGAGGATACATTCTTGTTACTTAATCATCTACATGCACATGTAAGAAAAAAACACTGCTCCACTTaGGAGTTTTACATCGGTTGC +
Preference number: 4 (lower is better)
Translates to: AGEDTFLLLNHLHAHVRKKHCST*EFYIGC
Trigger: GCAACCGATGTAAAACTCCCAAGTGGAGCAGTGTTT...TTTTCTTACATGTGCATGTAGATGATTAAGTAACAAGAATGTATCCTCTCCTGC
39% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CCA 90 bp TCCGAAGCTGAAATTGAGAGAGAATGTGTGGCATCACTATCGTCATCATCATCAATACCTGCTTTACAATaGGGTGCATATATACAAACA +
Preference number: 4 (lower is better)
Translates to: SEAEIERECVASLSSSSSIPALQ*GAYIQT
Trigger: TGTTTGTATATATGCACCCCATTGTAAAGCAGGTAT...TGATGATGATGACGATAGTGATGCCACACATTCTCTCTCAATTTCAGCTTCGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CCA 90 bp ATGCCCTGTAGAAATGTTGGACAAGTAGTATCAGATATTCCACCACTCAGTAATATAAGCAATGTATGGTaGCACACCCAAATTACAGTG +
Preference number: 4 (lower is better)
Translates to: MPCRNVGQVVSDIPPLSNISNVW*HTQITV
Trigger: CACTGTAATTTGGGTGTGCCACCATACATTGCTTAT...ATTACTGAGTGGTGGAATATCTGATACTACTTGTCCAACATTTCTACAGGGCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR TCA 90 bp GCAGGAGAGGATACATTCTTGTTACTTAATCATCTACATGCACATGTAAGAAAAAAGATGAGCACATCTTaGGTGTTTGGACTCAGGATT +
Preference number: 4 (lower is better)
Translates to: AGEDTFLLLNHLHAHVRKKMSTS*VFGLRI
Trigger: AATCCTGAGTCCAAACACTCAAGATGTGCTCATCTT...TTTTCTTACATGTGCATGTAGATGATTAAGTAACAAGAATGTATCCTCTCCTGC
38% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR GCA 90 bp TATAGTAGTACTGGTCCAGAGTTTAATCGTGTTCTCTTCAATTTTGGAGGTCAGGACCATGTTTTCAGGTaGTTCTTCACATATCTTCTT +
Preference number: 4 (lower is better)
Translates to: YSSTGPEFNRVLFNFGGQDHVFR*FFTYLL
Trigger: AAGAAGATATGTGAAGAAGCACCTGAAAACATGGTC...CTGACCTCCAAAATTGAAGAGAACACGATTAAACTCTGGACCAGTACTACTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558399.5
ENST00000559580.5
CDS-3UTR GCA 90 bp GCAGGAGAGGATACATTCTTGTTACTTAATCATCTACATGCACATGTAAGAAAAAGAAAGCCAGTCATTTaGCATCACCAGCCAAACATT +
Preference number: 4 (lower is better)
Translates to: AGEDTFLLLNHLHAHVRKRKPVI*HHQPNI
Trigger: AATGTTTGGCTGGTGATGGCAAATGACTGGCTTTCT...TTTTCTTACATGTGCATGTAGATGATTAAGTAACAAGAATGTATCCTCTCCTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CCA 90 bp GTCCACATAAGAAATAGTTGTGCCACAAAGGCTTGGTTTTATCAATCTGGATGTTATGTTGACTCTTCCTaGTGCTCGAACATAAAACTT +
Preference number: 4 (lower is better)
Translates to: VHIRNSCATKAWFYQSGCYVDSS*CSNIKL
Trigger: AAGTTTTATGTTCGAGCACCAGGAAGAGTCAACATA...ACATCCAGATTGATAAAACCAAGCCTTTGTGGCACAACTATTTCTTATGTGGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000558775.5
ENST00000558956.5
ENST00000559208.5
ENST00000559423.5
ENST00000559883.5
ENST00000559963.5
ENST00000560119.5
CDS-3UTR CCA 90 bp AGTCGCACTATAGTAGTACTGGTCCAGAGTTTAATCGTGTTCTCTTCAATTTTGTGTTCTCTTCAATTTTaGAGGTCAGAGTCCATTGAT +
Preference number: 4 (lower is better)
Translates to: SRTIVVLVQSLIVFSSILCSLQF*RSESID
Trigger: ATCAATGGACTCTGACCTCCAAAATTGAAGAGAACA...CAAAATTGAAGAGAACACGATTAAACTCTGGACCAGTACTACTATAGTGCGACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558399.5
ENST00000559580.5
3UTR CAA 72 bp CACACCCAAATTACAGTGGCAGGAGAGGATACATTCTaGTTACTTAATCATCTACATGCACATGTAAGAAAA +
Preference number: 4 (lower is better)
Translates to: HTQITVAGEDTF*LLNHLHAHVRK
Trigger: TTTTCTTACATGTGCATGTAGATGATTAAGTAACAAGAATGTATCCTCTCCTGCCACTGTAATTTGGGTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CCA 90 bp GCAGGAGAGGATACATTCTTGTTACTTAATCATCTACATGCACATGTAAGAAAATGTGCCACAAAGGCTTaGTTTTATCAATCTGGATGT +
Preference number: 4 (lower is better)
Translates to: AGEDTFLLLNHLHAHVRKCATKA*FYQSGC
Trigger: ACATCCAGATTGATAAAACCAAGCCTTTGTGGCACA...TTTTCTTACATGTGCATGTAGATGATTAAGTAACAAGAATGTATCCTCTCCTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CCA 90 bp ATGCCCTGTAGAAATGTTGGACAAGTAGTATCAGATATTCCACCACTCAGTAATAATCAAATTCCTACATaGGGCAGAAAAGTGATAGAA +
Preference number: 4 (lower is better)
Translates to: MPCRNVGQVVSDIPPLSNNQIPT*GRKVIE
Trigger: TTCTATCACTTTTCTGCCCCATGTAGGAATTTGATT...ATTACTGAGTGGTGGAATATCTGATACTACTTGTCCAACATTTCTACAGGGCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR GCA 90 bp ATTATTTTCTTCCTCTTACAGTCGCACTATAGTAGTACTGGTCCAGAGTTTAATGACCATGTTTTCAGGTaGTTCTTCACATATCTTCTT +
Preference number: 4 (lower is better)
Translates to: IIFFLLQSHYSSTGPEFNDHVFR*FFTYLL
Trigger: AAGAAGATATGTGAAGAAGCACCTGAAAACATGGTC...ATTAAACTCTGGACCAGTACTACTATAGTGCGACTGTAAGAGGAAGAAAATAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558399.5
ENST00000559580.5
CDS-3UTR CCA 90 bp GCAGGAGAGGATACATTCTTGTTACTTAATCATCTACATGCACATGTAAGAAAAAATCAAATTCCTACATaGGGCAGAAAAGTGATAGAA +
Preference number: 4 (lower is better)
Translates to: AGEDTFLLLNHLHAHVRKNQIPT*GRKVIE
Trigger: TTCTATCACTTTTCTGCCCCATGTAGGAATTTGATT...TTTTCTTACATGTGCATGTAGATGATTAAGTAACAAGAATGTATCCTCTCCTGC
34% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CCA 90 bp GCAGGAGAGGATACATTCTTGTTACTTAATCATCTACATGCACATGTAAGAAAATCAACAAAATCATATTaGGTACCAACAGCTGTGTTA +
Preference number: 4 (lower is better)
Translates to: AGEDTFLLLNHLHAHVRKSTKSY*VPTAVL
Trigger: TAACACAGCTGTTGGTACCCAATATGATTTTGTTGA...TTTTCTTACATGTGCATGTAGATGATTAAGTAACAAGAATGTATCCTCTCCTGC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS GCA 90 bp AGGGAGGAGACTGCTCCTTTACCCAGGAGGCTGGAAACTGCTCGATaGGAGCGCAGTTTCCGACGCCCTTCGGCTGAGACCTGCAGCACC +
Preference number: 5 (lower is better)
Translates to: REETAPLPRRLETAR*ERSFRRPSAETCST
Trigger: GGTGCTGCAGGTCTCAGCCGAAGGGCGTCGGAAACTGCGCTCGCATCGAGCAGTTTCCAGCCTCCTGGGTAAAGGAGCAGTCTCCTCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327171.7
ENST00000558775.5
ENST00000559040.1
ENST00000559883.5
ENST00000559963.5
ENST00000560654.5
ENST00000561074.5
CDS CCA 90 bp CAGAGTCCCAAGCAAGGGAGGAGACTGCTCCTTTACCCAGGAGGCTaGAAACTGCTCGATGCGAGCGCAGTTTCCGACGCCCTTCGGCTG +
Preference number: 5 (lower is better)
Translates to: QSPKQGRRLLLYPGG*KLLDASAVSDALRL
Trigger: CAGCCGAAGGGCGTCGGAAACTGCGCTCGCATCGAGCAGTTTCCAGCCTCCTGGGTAAAGGAGCAGTCTCCTCCCTTGCTTGGGACTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327171.7
ENST00000558775.5
ENST00000559040.1
ENST00000559883.5
ENST00000559963.5
ENST00000560654.5
ENST00000561074.5
CDS TCA 90 bp GCTGGAAACTGCTCGATGCGAGCGCAGTTTCCGACGCCCTTCGGCTaGGACCTGCAGCACCGGACGATGTCCCAGTTGCCAGCTTTAGTT +
Preference number: 5 (lower is better)
Translates to: AGNCSMRAQFPTPFG*DLQHRTMSQLPALV
Trigger: AACTAAAGCTGGCAACTGGGACATCGTCCGGTGCTGCAGGTCTCAGCCGAAGGGCGTCGGAAACTGCGCTCGCATCGAGCAGTTTCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327171.7
ENST00000558775.5
ENST00000559883.5
ENST00000559963.5
ENST00000560654.5
ENST00000561074.5
CDS GCA 90 bp TGGTGTGGCCTATCTGCAGGTCATAGCCTCTGCCTGAGGGAGCCCTaGAGCCCGGAAGACGGATACAAGGGATTTGTATTGGCCAGTTGG +
Preference number: 5 (lower is better)
Translates to: WCGLSAGHSLCLREP*SPEDGYKGFVLASW
Trigger: CCAACTGGCCAATACAAATCCCTTGTATCCGTCTTCCGGGCTGCAGGGCTCCCTCAGGCAGAGGCTATGACCTGCAGATAGGCCACACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000558956.5
ENST00000559208.5
ENST00000559423.5
CDS-3UTR CAA 90 bp GCGATAGAGCACGACTCCGTCATCTTGAGTGTTTGGACTCAGGATTTGGGTTCGGCTGAGATCACGCCGTaGCACTCCAGCCTGGGCGAT +
Preference number: 5 (lower is better)
Translates to: AIEHDSVILSVWTQDLGSAEITP*HSSLGD
Trigger: ATCGCCCAGGCTGGAGTGCAACGGCGTGATCTCAGC...CGAACCCAAATCCTGAGTCCAAACACTCAAGATGACGGAGTCGTGCTCTATCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560119.5
CDS TCA 90 bp CAGTCCAAGAATGGTGTGGCCTATCTGCAGGTCATAGCCTCTGCCTaGGGGAGCCCTGCAGCCCGGAAGACGGATACAAGGGATTTGTAT +
Preference number: 5 (lower is better)
Translates to: QSKNGVAYLQVIASA*GSPAARKTDTRDLY
Trigger: ATACAAATCCCTTGTATCCGTCTTCCGGGCTGCAGGGCTCCCTCAGGCAGAGGCTATGACCTGCAGATAGGCCACACCATTCTTGGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558956.5
ENST00000559208.5
ENST00000559423.5
CDS TCA 90 bp CGCGAAAGGCTTCTGGTCCTAAGCTGTCCCTTACTTTCACCGGAATaGGATGCGTCCAGAGTCCCAAGCAAGGGAGGAGACTGCTCCTTT +
Preference number: 5 (lower is better)
Translates to: RERLLVLSCPLLSPE*DASRVPSKGGDCSF
Trigger: AAAGGAGCAGTCTCCTCCCTTGCTTGGGACTCTGGACGCATCTCATTCCGGTGAAAGTAAGGGACAGCTTAGGACCAGAAGCCTTTCGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327171.7
ENST00000558775.5
ENST00000559040.1
ENST00000559883.5
ENST00000559963.5
ENST00000560654.5
ENST00000561074.5
CDS GCA 90 bp AAGGCTTCTGGTCCTAAGCTGTCCCTTACTTTCACCGGAATGAGATaGGTCCAGAGTCCCAAGCAAGGGAGGAGACTGCTCCTTTACCCA +
Preference number: 5 (lower is better)
Translates to: KASGPKLSLTFTGMR*VQSPKQGRRLLLYP
Trigger: TGGGTAAAGGAGCAGTCTCCTCCCTTGCTTGGGACTCTGGACGCATCTCATTCCGGTGAAAGTAAGGGACAGCTTAGGACCAGAAGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327171.7
ENST00000558775.5
ENST00000559040.1
ENST00000559883.5
ENST00000559963.5
ENST00000560654.5
ENST00000561074.5
CDS-3UTR CAA 90 bp GGCCAGAACTTGGTGGGATATTTCCATCTACCAGGCAGTTCATTCCAGTCAGGTTGTCCGCAGGTACCATaGATACTGTGCAGCCTCCCC +
Preference number: 5 (lower is better)
Translates to: GQNLVGYFHLPGSSFQSGCPQVP*ILCSLP
Trigger: GGGGAGGCTGCACAGTATCAATGGTACCTGCGGACA...ACCTGACTGGAATGAACTGCCTGGTAGATGGAAATATCCCACCAAGTTCTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560119.5
CDS-3UTR CAA 90 bp CTGGTCCATGCCTCCTCCTTCAGTGCCAATGTAACGCTCACTCTTGGCACAGATTCTGCAAGTTCCACCTaGGATAGATTCCTTCCCAGC +
Preference number: 5 (lower is better)
Translates to: LVHASSFSANVTLTLGTDSASST*DRFLPS
Trigger: GCTGGGAAGGAATCTATCCAAGGTGGAACTTGCAGA...ATCTGTGCCAAGAGTGAGCGTTACATTGGCACTGAAGGAGGAGGCATGGACCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000559208.5
ENST00000559423.5
ENST00000559883.5
ENST00000560119.5
CDS-3UTR CAA 90 bp GTGTTTGGACTCAGGATTTGGGTTCGGAGTTCCTCCAGGCTAATTCCCAGACACGCCCCACCTCCAGGTTaGGTAGCAAACAAACTTTGC +
Preference number: 5 (lower is better)
Translates to: VFGLRIWVRSSSRLIPRHAPPPG*VANKLC
Trigger: GCAAAGTTTGTTTGCTACCAAACCTGGAGGTGGGGC...GTGTCTGGGAATTAGCCTGGAGGAACTCCGAACCCAAATCCTGAGTCCAAACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560119.5
CDS-3UTR CAA 90 bp CTGGAGAGGCCAGAACTTGGTGGGATATTTCCATCTACCAGGCAGTTCATTCCACGGACGATGTCCCAGTaGCCAGCTTTAGTTGCTAAG +
Preference number: 5 (lower is better)
Translates to: LERPELGGIFPSTRQFIPRTMSQ*PALVAK
Trigger: CTTAGCAACTAAAGCTGGCAACTGGGACATCGTCCG...TGGAATGAACTGCCTGGTAGATGGAAATATCCCACCAAGTTCTGGCCTCTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000558775.5
ENST00000559883.5
ENST00000559963.5
CDS-3UTR CAA 90 bp TGCCTCCTCCTTCAGTGCCAATGTAACGCTCACTCTTGGCACAGATTTCTGCAACGGACGATGTCCCAGTaGCCAGCTTTAGTTGCTAAG +
Preference number: 5 (lower is better)
Translates to: CLLLQCQCNAHSWHRFLQRTMSQ*PALVAK
Trigger: CTTAGCAACTAAAGCTGGCAACTGGGACATCGTCCG...TTGCAGAAATCTGTGCCAAGAGTGAGCGTTACATTGGCACTGAAGGAGGAGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559883.5
CDS-3UTR CAA 90 bp GGAGCTGGAGAGGCCAGAACTTGGTGGGATATTTCCATCTACCAGGCAGTTCATCCGGATACAAGGGATTaGTATTGGCCAGTTGGAGAG +
Preference number: 5 (lower is better)
Translates to: GAGEARTWWDISIYQAVHPDTRD*YWPVGE
Trigger: CTCTCCAACTGGCCAATACAAATCCCTTGTATCCGG...ATGAACTGCCTGGTAGATGGAAATATCCCACCAAGTTCTGGCCTCTCCAGCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000558775.5
ENST00000559883.5
ENST00000559963.5
CDS-3UTR CAA 90 bp TGCCTCCTCCTTCAGTGCCAATGTAACGCTCACTCTTGGCACAGATTTCTGCAAAGAAAGCTGGGCAGCTaGTCCGCAGGTACCATTGAT +
Preference number: 5 (lower is better)
Translates to: CLLLQCQCNAHSWHRFLQRKLGS*SAGTID
Trigger: ATCAATGGTACCTGCGGACAAGCTGCCCAGCTTTCT...TTGCAGAAATCTGTGCCAAGAGTGAGCGTTACATTGGCACTGAAGGAGGAGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560119.5
CDS-3UTR CAA 90 bp GCTTTTGTATTTAGCCAGGAGCTTCGCAGCCAGCCGACACTCCATCACCCTGATTCGGATACAAGGGATTaGTATTGGCCAGTTGGAGAG +
Preference number: 5 (lower is better)
Translates to: AFVFSQELRSQPTLHHPDSDTRD*YWPVGE
Trigger: CTCTCCAACTGGCCAATACAAATCCCTTGTATCCGA...ATCAGGGTGATGGAGTGTCGGCTGGCTGCGAAGCTCCTGGCTAAATACAAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560119.5
CDS-3UTR CAA 90 bp TTAGCACTAGTACTGAAGTCCCTCCTGCTGTGTGGCCCACTTCTGAACAGGCCAACGGATACAAGGGATTaGTATTGGCCAGTTGGAGAG +
Preference number: 5 (lower is better)
Translates to: LALVLKSLLLCGPLLNRPTDTRD*YWPVGE
Trigger: CTCTCCAACTGGCCAATACAAATCCCTTGTATCCGT...TGGCCTGTTCAGAAGTGGGCCACACAGCAGGAGGGACTTCAGTACTAGTGCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000558956.5
ENST00000559208.5
ENST00000559423.5
CDS GCA 90 bp CTTCTTAAACTGGAGCACTCGCGCAGCCTCGCTGTACACATGCTTTaGCCGCTGATAGAGTTTGAAGATGAGCACATCTTGAGTGTTTGG +
Preference number: 5 (lower is better)
Translates to: LLKLEHSRSLAVHML*PLIEFEDEHILSVW
Trigger: CCAAACACTCAAGATGTGCTCATCTTCAAACTCTATCAGCGGGCAAAGCATGTGTACAGCGAGGCTGCGCGAGTGCTCCAGTTTAAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327171.7
ENST00000396509.6
ENST00000544523.5
ENST00000558399.5
ENST00000559454.5
ENST00000559580.5
ENST00000560031.6
CDS GCA 90 bp CTTCTTAAACTGGAGCACTCGCGCAGCCTCGCTGTACACATGCTTTaGCCGCTGATAGAGTTTGAAGATGAGCACATTTTCACCCATGCT +
Preference number: 5 (lower is better)
Translates to: LLKLEHSRSLAVHML*PLIEFEDEHIFTHA
Trigger: AGCATGGGTGAAAATGTGCTCATCTTCAAACTCTATCAGCGGGCAAAGCATGTGTACAGCGAGGCTGCGCGAGTGCTCCAGTTTAAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561014.1
CDS CCA 90 bp CCCTGCAGCCCGGAAGACGGATACAAGGGATTTGTATTGGCCAGTTaGAGAGCGTACGTTTTCACAGGTTCTACAGCTATTAGCACATCT +
Preference number: 5 (lower is better)
Translates to: PCSPEDGYKGFVLAS*RAYVFTGSTAISTS
Trigger: AGATGTGCTAATAGCTGTAGAACCTGTGAAAACGTACGCTCTCCAACTGGCCAATACAAATCCCTTGTATCCGTCTTCCGGGCTGCAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558956.5
ENST00000559208.5
ENST00000559423.5
CDS CCA 90 bp TGCACCTTCGCAGCCAGCCGACACTCCATCACCCTGATATTGAAATaGGAAGTTGCTGCCTTATTCATCTCCACACAACTGTTGGCAATC +
Preference number: 5 (lower is better)
Translates to: CTFAASRHSITLILK*EVAALFISTQLLAI
Trigger: GATTGCCAACAGTTGTGTGGAGATGAATAAGGCAGCAACTTCCCATTTCAATATCAGGGTGATGGAGTGTCGGCTGGCTGCGAAGGTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560138.5
CDS-3UTR CAA 90 bp AGCTCATGTGGCTCTGGTTCATCAACTCTCCCAGCAGCTGGACCATGTTTTCAGTGCTCTCCTATTATGTaGACTCTTCCTGGTGCTCGA +
Preference number: 5 (lower is better)
Translates to: SSCGSGSSTLPAAGPCFQCSPIM*TLPGAR
Trigger: TCGAGCACCAGGAAGAGTCAACATAATAGGAGAGCA...CTGAAAACATGGTCCAGCTGCTGGGAGAGTTGATGAACCAGAGCCACATGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560119.5
CDS-3UTR CAA 90 bp GGCGATAGAGCACGACTCCGTCATCTTGAGTGTTTGGACTCAGGATTTGGGTTCTACAAGGGATTTGTATaGGCCAGTTGGAGAGCGTAC +
Preference number: 5 (lower is better)
Translates to: GDRARLRHLECLDSGFGFYKGFV*ASWRAY
Trigger: GTACGCTCTCCAACTGGCCAATACAAATCCCTTGTA...GAACCCAAATCCTGAGTCCAAACACTCAAGATGACGGAGTCGTGCTCTATCGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560119.5
CDS-3UTR CAA 90 bp GGCCAGAACTTGGTGGGATATTTCCATCTACCAGGCAGTTCATTCCAGTCAGGTTCTGCAAGTTCCACCTaGGATAGATTCCTTCCCAGC +
Preference number: 5 (lower is better)
Translates to: GQNLVGYFHLPGSSFQSGSASST*DRFLPS
Trigger: GCTGGGAAGGAATCTATCCAAGGTGGAACTTGCAGA...ACCTGACTGGAATGAACTGCCTGGTAGATGGAAATATCCCACCAAGTTCTGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000559208.5
ENST00000559423.5
ENST00000559883.5
ENST00000560119.5
CDS-3UTR CAA 90 bp TGTGGGCCAAACTATATACATCTGCAGACCAGATGTGGCCCATGGGCTGCTGGGTACTTATGGGCATTCTaGTTAAGTCTGAAGGGCTTC +
Preference number: 5 (lower is better)
Translates to: CGPNYIHLQTRCGPWAAGYLWAF*LSLKGF
Trigger: GAAGCCCTTCAGACTTAACAAGAATGCCCATAAGTA...CCCAGCAGCCCATGGGCCACATCTGGTCTGCAGATGTATATAGTTTGGCCCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CAA 90 bp CCACACAACTGTTGGCAATCACAAACACTGCTCCACTTGGGAGTTTTACATCGGACTGAAGTGGGAGAATaGCTTGAACCTGGGAGGCAG +
Preference number: 5 (lower is better)
Translates to: PHNCWQSQTLLHLGVLHRTEVGE*LEPGRQ
Trigger: CTGCCTCCCAGGTTCAAGCAATTCTCCCACTTCAGT...CCGATGTAAAACTCCCAAGTGGAGCAGTGTTTGTGATTGCCAACAGTTGTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560119.5
CDS GCA 90 bp AAAATGTGTCAAAAACTAACAGATGCTGATGAGGCTAGGATGTTCTaGCACCTGGACCCGACGCGTAGCAGGGCTCTCTGTAGCCATATT +
Preference number: 5 (lower is better)
Translates to: KMCQKLTDADEARMF*HLDPTRSRALCSHI
Trigger: AATATGGCTACAGAGAGCCCTGCTACGCGTCGGGTCCAGGTGGCAGAACATCCTAGCCTCATCAGCATCTGTTAGTTTTTGACACATTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558145.5
CDS-3UTR CAA 90 bp ATTTCTGCAAGTTCCACCTTGGATAGATTCCTTCCCAGCACTGTGAGCGTCACCTGCTCTCCTATTATGTaGACTCTTCCTGGTGCTCGA +
Preference number: 5 (lower is better)
Translates to: ISASSTLDRFLPSTVSVTCSPIM*TLPGAR
Trigger: TCGAGCACCAGGAAGAGTCAACATAATAGGAGAGCA...GGTGACGCTCACAGTGCTGGGAAGGAATCTATCCAAGGTGGAACTTGCAGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000559208.5
ENST00000559423.5
ENST00000559883.5
ENST00000560119.5
CDS-3UTR CAA 90 bp CGGATACAAGGGATTTGTATTGGCCAGTTGGAGAGCGTACGTTTTCACAGGTTCCCGGATACAAGGGATTaGTATTGGCCAGTTGGAGAG +
Preference number: 5 (lower is better)
Translates to: RIQGICIGQLESVRFHRFPDTRD*YWPVGE
Trigger: CTCTCCAACTGGCCAATACAAATCCCTTGTATCCGG...GAACCTGTGAAAACGTACGCTCTCCAACTGGCCAATACAAATCCCTTGTATCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558775.5
ENST00000559883.5
ENST00000559963.5
CDS-3UTR CAA 90 bp TGCCTCCTCCTTCAGTGCCAATGTAACGCTCACTCTTGGCACAGATTTCTGCAATGGAGAGGCCAGAACTaGGTGGGATATTTCCATCTA +
Preference number: 5 (lower is better)
Translates to: CLLLQCQCNAHSWHRFLQWRGQN*VGYFHL
Trigger: TAGATGGAAATATCCCACCAAGTTCTGGCCTCTCCA...TTGCAGAAATCTGTGCCAAGAGTGAGCGTTACATTGGCACTGAAGGAGGAGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000559208.5
ENST00000559423.5
ENST00000559883.5
ENST00000560119.5
CDS-3UTR CAA 90 bp GGCCAGAACTTGGTGGGATATTTCCATCTACCAGGCAGTTCATTCCAGTCAGGTCAAACACTGCTCCACTaGGGAGTTTTACATCGGTTG +
Preference number: 5 (lower is better)
Translates to: GQNLVGYFHLPGSSFQSGQTLLH*GVLHRL
Trigger: CAACCGATGTAAAACTCCCAAGTGGAGCAGTGTTTG...ACCTGACTGGAATGAACTGCCTGGTAGATGGAAATATCCCACCAAGTTCTGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559423.5
ENST00000560119.5
CDS-3UTR CAA 90 bp TTTGTATTTAGCCAGGAGCTTCGCAGCCAGCCGACACTCCATCACCCTGATATTTCCATCACCCTGATATaGAAATGGGAAGTTGCTGCC +
Preference number: 5 (lower is better)
Translates to: FVFSQELRSQPTLHHPDISITLI*KWEVAA
Trigger: GGCAGCAACTTCCCATTTCAATATCAGGGTGATGGA...AATATCAGGGTGATGGAGTGTCGGCTGGCTGCGAAGCTCCTGGCTAAATACAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560119.5
CDS-3UTR CAA 90 bp GGAGCTGGAGAGGCCAGAACTTGGTGGGATATTTCCATCTACCAGGCAGTTCATTCCCATTGCAAGCTTTaGTATTTAGCCAGGAGCTTC +
Preference number: 5 (lower is better)
Translates to: GAGEARTWWDISIYQAVHSHCKL*YLARSF
Trigger: GAAGCTCCTGGCTAAATACAAAAGCTTGCAATGGGA...ATGAACTGCCTGGTAGATGGAAATATCCCACCAAGTTCTGGCCTCTCCAGCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560119.5
CDS-3UTR CAA 90 bp ATCTTATTCTTCACTACATACCAAAGCAAAGCCTTCACTCTCACTGAGCCTCCTTGTCCGCAGGTACCATaGATACTGTGCAGCCTCCCC +
Preference number: 5 (lower is better)
Translates to: ILFFTTYQSKAFTLTEPPCPQVP*ILCSLP
Trigger: GGGGAGGCTGCACAGTATCAATGGTACCTGCGGACA...AGGAGGCTCAGTGAGAGTGAAGGCTTTGCTTTGGTATGTAGTGAAGAATAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CAA 90 bp AATTTACTGTGGCACAGAAAGTCCTGCCAATTCCTAAGTGCCCTAAGTAGTTTCTGTCCGCAGGTACCATaGATACTGTGCAGCCTCCCC +
Preference number: 5 (lower is better)
Translates to: NLLWHRKSCQFLSALSSFCPQVP*ILCSLP
Trigger: GGGGAGGCTGCACAGTATCAATGGTACCTGCGGACA...GAAACTACTTAGGGCACTTAGGAATTGGCAGGACTTTCTGTGCCACAGTAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327171.7
ENST00000396509.6
ENST00000544523.5
ENST00000559454.5
ENST00000560031.6
ENST00000560119.5
CDS-3UTR CAA 90 bp CTCTTACAGTCGCACTATAGTAGTACTGGTCCAGAGTTTAATCGTGTTCTCTTCTGTCCGCAGGTACCATaGATACTGTGCAGCCTCCCC +
Preference number: 5 (lower is better)
Translates to: LLQSHYSSTGPEFNRVLFCPQVP*ILCSLP
Trigger: GGGGAGGCTGCACAGTATCAATGGTACCTGCGGACA...GAAGAGAACACGATTAAACTCTGGACCAGTACTACTATAGTGCGACTGTAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559580.5
CDS-3UTR CAA 90 bp AATTTACTGTGGCACAGAAAGTCCTGCCAATTCCTAAGTGCCCTAAGTAGTTTCCCAAGATCGTGCCACTaGCACTCTAGCCTCCAGCAC +
Preference number: 5 (lower is better)
Translates to: NLLWHRKSCQFLSALSSFPRSCH*HSSLQH
Trigger: GTGCTGGAGGCTAGAGTGCAAGTGGCACGATCTTGG...GAAACTACTTAGGGCACTTAGGAATTGGCAGGACTTTCTGTGCCACAGTAAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544523.5
CDS-3UTR CAA 90 bp CATCAACTCTCCCAGCAGCTGGACCATGTTTTCAGGTGCTTCTTCACATATCTTAAGTGGGAGAATTGCTaGAACCTGGGAGGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: HQLSQQLDHVFRCFFTYLKWENC*NLGGRG
Trigger: ACCTCTGCCTCCCAGGTTCAAGCAATTCTCCCACTT...AAGATATGTGAAGAAGCACCTGAAAACATGGTCCAGCTGCTGGGAGAGTTGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560119.5
CDS-3UTR CAA 90 bp TTGTATTGGCCAGTTGGAGAGCGTACGTTTTCACAGGTTCTACAGCTATTAGCACGGACGATGTCCCAGTaGCCAGCTTTAGTTGCTAAG +
Preference number: 5 (lower is better)
Translates to: LYWPVGERTFSQVLQLLARTMSQ*PALVAK
Trigger: CTTAGCAACTAAAGCTGGCAACTGGGACATCGTCCG...TGCTAATAGCTGTAGAACCTGTGAAAACGTACGCTCTCCAACTGGCCAATACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558775.5
ENST00000559883.5
ENST00000559963.5
CDS-3UTR CAA 90 bp TCAATCTGGATGTTATTAGCACTAGTACTGAAGTCCCTCCTGCTGTGTGGCCCATGCTCTCCTATTATGTaGACTCTTCCTGGTGCTCGA +
Preference number: 5 (lower is better)
Translates to: SIWMLLALVLKSLLLCGPCSPIM*TLPGAR
Trigger: TCGAGCACCAGGAAGAGTCAACATAATAGGAGAGCA...TGGGCCACACAGCAGGAGGGACTTCAGTACTAGTGCTAATAACATCCAGATTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000558956.5
ENST00000559208.5
ENST00000559423.5
CDS-3UTR CAA 90 bp TCAATCTGGATGTTATTAGCACTAGTACTGAAGTCCCTCCTGCTGTGTGGCCCATACAAGGGATTTGTATaGGCCAGTTGGAGAGCGTAC +
Preference number: 5 (lower is better)
Translates to: SIWMLLALVLKSLLLCGPYKGFV*ASWRAY
Trigger: GTACGCTCTCCAACTGGCCAATACAAATCCCTTGTA...TGGGCCACACAGCAGGAGGGACTTCAGTACTAGTGCTAATAACATCCAGATTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000558956.5
ENST00000559208.5
ENST00000559423.5
CDS-3UTR CAA 90 bp CTCCTTCAGTGCCAATGTAACGCTCACTCTTGGCACAGATTTCTGCAAGTTCCATGGAGAGGCCAGAACTaGGTGGGATATTTCCATCTA +
Preference number: 5 (lower is better)
Translates to: LLQCQCNAHSWHRFLQVPWRGQN*VGYFHL
Trigger: TAGATGGAAATATCCCACCAAGTTCTGGCCTCTCCA...TGGAACTTGCAGAAATCTGTGCCAAGAGTGAGCGTTACATTGGCACTGAAGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000559208.5
ENST00000559423.5
ENST00000559883.5
ENST00000560119.5
CDS-3UTR CAA 90 bp GCCAGAACTTGGTGGGATATTTCCATCTACCAGGCAGTTCATTCCAGTCAGGTTTGGAGAGGCCAGAACTaGGTGGGATATTTCCATCTA +
Preference number: 5 (lower is better)
Translates to: ARTWWDISIYQAVHSSQVWRGQN*VGYFHL
Trigger: TAGATGGAAATATCCCACCAAGTTCTGGCCTCTCCA...AACCTGACTGGAATGAACTGCCTGGTAGATGGAAATATCCCACCAAGTTCTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558775.5
ENST00000559208.5
ENST00000559423.5
ENST00000559883.5
ENST00000559963.5
ENST00000560119.5
CDS-3UTR CAA 90 bp AGCACTAGTACTGAAGTCCGGATACAAGGGATTTGTATTGGCCAGTTGGAGAGCTGGAGAGGCCAGAACTaGGTGGGATATTTCCATCTA +
Preference number: 5 (lower is better)
Translates to: STSTEVRIQGICIGQLESWRGQN*VGYFHL
Trigger: TAGATGGAAATATCCCACCAAGTTCTGGCCTCTCCA...GCTCTCCAACTGGCCAATACAAATCCCTTGTATCCGGACTTCAGTACTAGTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000558775.5
ENST00000559883.5
ENST00000559963.5
CDS-3UTR CAA 90 bp TTTGCCTATACCCATAGGCTTTGCTCATCTGCAGTGTGCACTCCACAGCTTTTATCTGCAAGTTCCACCTaGGATAGATTCCTTCCCAGC +
Preference number: 5 (lower is better)
Translates to: FAYTHRLCSSAVCTPQLLSASST*DRFLPS
Trigger: GCTGGGAAGGAATCTATCCAAGGTGGAACTTGCAGA...TAAAAGCTGTGGAGTGCACACTGCAGATGAGCAAAGCCTATGGGTATAGGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CAA 90 bp GCTGCCTTATTCATCTCCACACAACTGTTGGCAATCACAAACACTGCTCCACTTTCTGCAAGTTCCACCTaGGATAGATTCCTTCCCAGC +
Preference number: 5 (lower is better)
Translates to: AALFISTQLLAITNTAPLSASST*DRFLPS
Trigger: GCTGGGAAGGAATCTATCCAAGGTGGAACTTGCAGA...AAGTGGAGCAGTGTTTGTGATTGCCAACAGTTGTGTGGAGATGAATAAGGCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559423.5
ENST00000560119.5
CDS-3UTR CAA 90 bp TTTCATAAGCAATGTATGGTGGCACACCCAAATTACAGTGGCAGGAGAGGATACGTTTGGACTCAGGATTaGGGTTCGGAGTTCCTCCAG +
Preference number: 5 (lower is better)
Translates to: FHKQCMVAHPNYSGRRGYVWTQD*GSEFLQ
Trigger: CTGGAGGAACTCCGAACCCAAATCCTGAGTCCAAAC...GTATCCTCTCCTGCCACTGTAATTTGGGTGTGCCACCATACATTGCTTATGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CAA 90 bp GAAGTTGCTGCCTTATTCATCTCCACACAACTGTTGGCAATCACAAACACTGCTGTTTGGACTCAGGATTaGGGTTCGGAGTTCCTCCAG +
Preference number: 5 (lower is better)
Translates to: EVAALFISTQLLAITNTAVWTQD*GSEFLQ
Trigger: CTGGAGGAACTCCGAACCCAAATCCTGAGTCCAAAC...AGCAGTGTTTGTGATTGCCAACAGTTGTGTGGAGATGAATAAGGCAGCAACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560119.5
CDS-3UTR CAA 90 bp CACATACCTGCATACCTGCTTTACAATGGGGTGCATATATACAAACAAGCTTTGTGTCCGCAGGTACCATaGATACTGTGCAGCCTCCCC +
Preference number: 5 (lower is better)
Translates to: HIPAYLLYNGVHIYKQALCPQVP*ILCSLP
Trigger: GGGGAGGCTGCACAGTATCAATGGTACCTGCGGACA...CAAAGCTTGTTTGTATATATGCACCCCATTGTAAAGCAGGTATGCAGGTATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CAA 90 bp AGACTCCAAGCAAAGGCTACCAAGAAACCTCATGAAGTGAAACAGGACTTTGAGAGAAAGCTGGGCAGCTaGTCCGCAGGTACCATTGAT +
Preference number: 5 (lower is better)
Translates to: RLQAKATKKPHEVKQDFERKLGS*SAGTID
Trigger: ATCAATGGTACCTGCGGACAAGCTGCCCAGCTTTCT...CTCAAAGTCCTGTTTCACTTCATGAGGTTTCTTGGTAGCCTTTGCTTGGAGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CAA 90 bp TTTCATAAGCAATGTATGGTGGCACACCCAAATTACAGTGGCAGGAGAGGATACAGAAAGCTGGGCAGCTaGTCCGCAGGTACCATTGAT +
Preference number: 5 (lower is better)
Translates to: FHKQCMVAHPNYSGRRGYRKLGS*SAGTID
Trigger: ATCAATGGTACCTGCGGACAAGCTGCCCAGCTTTCT...GTATCCTCTCCTGCCACTGTAATTTGGGTGTGCCACCATACATTGCTTATGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CAA 90 bp AGACTCCAAGCAAAGGCTACCAAGAAACCTCATGAAGTGAAACAGGACTTTGAGGCCCCACCTCCAGGTTaGGTAGCAAACAAACTTTGC +
Preference number: 5 (lower is better)
Translates to: RLQAKATKKPHEVKQDFEAPPPG*VANKLC
Trigger: GCAAAGTTTGTTTGCTACCAAACCTGGAGGTGGGGC...CTCAAAGTCCTGTTTCACTTCATGAGGTTTCTTGGTAGCCTTTGCTTGGAGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CAA 90 bp TTTGCCTATACCCATAGGCTTTGCTCATCTGCAGTGTGCACTCCACAGCTTTTATGGCTCACTGTAGCTTaGAAGTCCTCAGCTCAAGTG +
Preference number: 5 (lower is better)
Translates to: FAYTHRLCSSAVCTPQLLWLTVA*KSSAQV
Trigger: CACTTGAGCTGAGGACTTCAAAGCTACAGTGAGCCA...TAAAAGCTGTGGAGTGCACACTGCAGATGAGCAAAGCCTATGGGTATAGGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CAA 90 bp TTCACAGGTTCTACAGCTATTAGCACATCTTGTTCTACAGCCATAGGAAGAACACCAAGATCGTGCCACTaGCACTCTAGCCTCCAGCAC +
Preference number: 5 (lower is better)
Translates to: FTGSTAISTSCSTAIGRTPRSCH*HSSLQH
Trigger: GTGCTGGAGGCTAGAGTGCAAGTGGCACGATCTTGG...TGTTCTTCCTATGGCTGTAGAACAAGATGTGCTAATAGCTGTAGAACCTGTGAA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561074.5
CDS-3UTR CAA 90 bp TATGGTGGCACACCCAAATTACAGTGGCAGGAGAGGATACATTCTTGTTACTTACGGACGATGTCCCAGTaGCCAGCTTTAGTTGCTAAG +
Preference number: 5 (lower is better)
Translates to: YGGTPKLQWQERIHSCYLRTMSQ*PALVAK
Trigger: CTTAGCAACTAAAGCTGGCAACTGGGACATCGTCCG...TAAGTAACAAGAATGTATCCTCTCCTGCCACTGTAATTTGGGTGTGCCACCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327171.7
CDS-3UTR CAA 90 bp TGGTGGGATATTTCCATCTACCAGGCAGTTCATTCCAGTCAGGTTACTAAGACCTGCTCTCCTATTATGTaGACTCTTCCTGGTGCTCGA +
Preference number: 5 (lower is better)
Translates to: WWDISIYQAVHSSQVTKTCSPIM*TLPGAR
Trigger: TCGAGCACCAGGAAGAGTCAACATAATAGGAGAGCA...GGTCTTAGTAACCTGACTGGAATGAACTGCCTGGTAGATGGAAATATCCCACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000559208.5
ENST00000559423.5
ENST00000559883.5
ENST00000559963.5
ENST00000560119.5
CDS-3UTR CAA 90 bp TTTCCATCTACCAGGCAGTTCATTCCAGTCAGGTTACTAAGACCAAAGTGTTCCCCGGATACAAGGGATTaGTATTGGCCAGTTGGAGAG +
Preference number: 5 (lower is better)
Translates to: FPSTRQFIPVRLLRPKCSPDTRD*YWPVGE
Trigger: CTCTCCAACTGGCCAATACAAATCCCTTGTATCCGG...GGAACACTTTGGTCTTAGTAACCTGACTGGAATGAACTGCCTGGTAGATGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558775.5
ENST00000559883.5
ENST00000559963.5
CDS-3UTR CAA 90 bp CAGATTTCTGCAAGTTCCACCTTGGATAGATTCCTTCCCAGCACTGTGAGCGTCTTGTGCCACAAAGGCTaGGTTTTATCAATCTGGATG +
Preference number: 5 (lower is better)
Translates to: QISASSTLDRFLPSTVSVLCHKG*VLSIWM
Trigger: CATCCAGATTGATAAAACCAAGCCTTTGTGGCACAA...GACGCTCACAGTGCTGGGAAGGAATCTATCCAAGGTGGAACTTGCAGAAATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000559208.5
ENST00000559423.5
ENST00000559883.5
ENST00000560119.5
CDS-3UTR CAA 90 bp GGAGAGGCCAGAACTTGGTGGGATATTTCCATCTACCAGGCAGTTCATTCCAGTTTGTGCCACAAAGGCTaGGTTTTATCAATCTGGATG +
Preference number: 5 (lower is better)
Translates to: GEARTWWDISIYQAVHSSLCHKG*VLSIWM
Trigger: CATCCAGATTGATAAAACCAAGCCTTTGTGGCACAA...ACTGGAATGAACTGCCTGGTAGATGGAAATATCCCACCAAGTTCTGGCCTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558775.5
ENST00000559208.5
ENST00000559423.5
ENST00000559883.5
ENST00000559963.5
ENST00000560119.5
CDS-3UTR CAA 90 bp ATTTCTGCAAGTTCCACCTTGGATAGATTCCTTCCCAGCACTGTGAGCGTCACCTTGTGCCACAAAGGCTaGGTTTTATCAATCTGGATG +
Preference number: 5 (lower is better)
Translates to: ISASSTLDRFLPSTVSVTLCHKG*VLSIWM
Trigger: CATCCAGATTGATAAAACCAAGCCTTTGTGGCACAA...GGTGACGCTCACAGTGCTGGGAAGGAATCTATCCAAGGTGGAACTTGCAGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000559208.5
ENST00000559423.5
ENST00000559883.5
ENST00000560119.5
CDS-3UTR CAA 90 bp ACAAACACTGCTCCACTTGGGAGTTTTACATCGGTTGCCCTCAGAGGACTAAATTGGAGAGGCCAGAACTaGGTGGGATATTTCCATCTA +
Preference number: 5 (lower is better)
Translates to: TNTAPLGSFTSVALRGLNWRGQN*VGYFHL
Trigger: TAGATGGAAATATCCCACCAAGTTCTGGCCTCTCCA...ATTTAGTCCTCTGAGGGCAACCGATGTAAAACTCCCAAGTGGAGCAGTGTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559423.5
ENST00000560119.5
CDS-3UTR CAA 90 bp ATCGGTTGCCCTCAGAGGACTAAATTCTATCAACTTGGCAGTTCCTTCTTCTGCCAAACACTGCTCCACTaGGGAGTTTTACATCGGTTG +
Preference number: 5 (lower is better)
Translates to: IGCPQRTKFYQLGSSFFCQTLLH*GVLHRL
Trigger: CAACCGATGTAAAACTCCCAAGTGGAGCAGTGTTTG...GCAGAAGAAGGAACTGCCAAGTTGATAGAATTTAGTCCTCTGAGGGCAACCGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559423.5
ENST00000560119.5
CDS-3UTR CAA 90 bp CTCCTTCAGTGCCAATGTAACGCTCACTCTTGGCACAGATTTCTGCAAGTTCCAATCTCCACACAACTGTaGGCAATCACAAACACTGCT +
Preference number: 5 (lower is better)
Translates to: LLQCQCNAHSWHRFLQVPISTQL*AITNTA
Trigger: AGCAGTGTTTGTGATTGCCAACAGTTGTGTGGAGAT...TGGAACTTGCAGAAATCTGTGCCAAGAGTGAGCGTTACATTGGCACTGAAGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559423.5
ENST00000560119.5
CDS-3UTR CAA 90 bp TGCCAATGTAACGCTCACTCTTGGCACAGATTTCTGCAAGTTCCACCTTGGATATCCAGCCTCAGTACTTaGTCCCATTGCAAGCTTTTG +
Preference number: 5 (lower is better)
Translates to: CQCNAHSWHRFLQVPPWISSLST*SHCKLL
Trigger: CAAAAGCTTGCAATGGGACAAAGTACTGAGGCTGGA...TATCCAAGGTGGAACTTGCAGAAATCTGTGCCAAGAGTGAGCGTTACATTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560119.5
CDS-3UTR CAA 90 bp AATTTACTGTGGCACAGAAAGTCCTGCCAATTCCTAAGTGCCCTAAGTAGTTTCGTTTGGACTCAGGATTaGGGTTCGGAGTTCCTCCAG +
Preference number: 5 (lower is better)
Translates to: NLLWHRKSCQFLSALSSFVWTQD*GSEFLQ
Trigger: CTGGAGGAACTCCGAACCCAAATCCTGAGTCCAAAC...GAAACTACTTAGGGCACTTAGGAATTGGCAGGACTTTCTGTGCCACAGTAAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327171.7
ENST00000396509.6
ENST00000544523.5
ENST00000559454.5
ENST00000560031.6
ENST00000560119.5
CDS-3UTR CAA 90 bp TATGGTGGCACACCCAAATTACAGTGGCAGGAGAGGATACATTCTTGTTACTTAGTTTGGACTCAGGATTaGGGTTCGGAGTTCCTCCAG +
Preference number: 5 (lower is better)
Translates to: YGGTPKLQWQERIHSCYLVWTQD*GSEFLQ
Trigger: CTGGAGGAACTCCGAACCCAAATCCTGAGTCCAAAC...TAAGTAACAAGAATGTATCCTCTCCTGCCACTGTAATTTGGGTGTGCCACCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CAA 90 bp AATTTACTGTGGCACAGAAAGTCCTGCCAATTCCTAAGTGCCCTAAGTAGTTTCAGAAAGCTGGGCAGCTaGTCCGCAGGTACCATTGAT +
Preference number: 5 (lower is better)
Translates to: NLLWHRKSCQFLSALSSFRKLGS*SAGTID
Trigger: ATCAATGGTACCTGCGGACAAGCTGCCCAGCTTTCT...GAAACTACTTAGGGCACTTAGGAATTGGCAGGACTTTCTGTGCCACAGTAAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327171.7
ENST00000396509.6
ENST00000544523.5
ENST00000559454.5
ENST00000560031.6
ENST00000560119.5
CDS-3UTR CAA 90 bp AATTTACTGTGGCACAGAAAGTCCTGCCAATTCCTAAGTGCCCTAAGTAGTTTCGCCCCACCTCCAGGTTaGGTAGCAAACAAACTTTGC +
Preference number: 5 (lower is better)
Translates to: NLLWHRKSCQFLSALSSFAPPPG*VANKLC
Trigger: GCAAAGTTTGTTTGCTACCAAACCTGGAGGTGGGGC...GAAACTACTTAGGGCACTTAGGAATTGGCAGGACTTTCTGTGCCACAGTAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327171.7
ENST00000396509.6
ENST00000544523.5
ENST00000559454.5
ENST00000560031.6
ENST00000560119.5
CDS-3UTR CAA 90 bp AGACTCCAAGCAAAGGCTACCAAGAAACCTCATGAAGTGAAACAGGACTTTGAGTGGCTCACTGTAGCTTaGAAGTCCTCAGCTCAAGTG +
Preference number: 5 (lower is better)
Translates to: RLQAKATKKPHEVKQDFEWLTVA*KSSAQV
Trigger: CACTTGAGCTGAGGACTTCAAAGCTACAGTGAGCCA...CTCAAAGTCCTGTTTCACTTCATGAGGTTTCTTGGTAGCCTTTGCTTGGAGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CAA 90 bp TGGTGGGATATTTCCATCTACCAGGCAGTTCATTCCAGTCAGGTTACTAAGACCACGGATACAAGGGATTaGTATTGGCCAGTTGGAGAG +
Preference number: 5 (lower is better)
Translates to: WWDISIYQAVHSSQVTKTTDTRD*YWPVGE
Trigger: CTCTCCAACTGGCCAATACAAATCCCTTGTATCCGT...GGTCTTAGTAACCTGACTGGAATGAACTGCCTGGTAGATGGAAATATCCCACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559208.5
ENST00000559423.5
CDS-3UTR CAA 90 bp TACCAGGCAGTTCATTCCAGTCAGGTTACTAAGACCAAAGTGTTCCTGAATTCCTGCTCTCCTATTATGTaGACTCTTCCTGGTGCTCGA +
Preference number: 5 (lower is better)
Translates to: YQAVHSSQVTKTKVFLNSCSPIM*TLPGAR
Trigger: TCGAGCACCAGGAAGAGTCAACATAATAGGAGAGCA...GGAATTCAGGAACACTTTGGTCTTAGTAACCTGACTGGAATGAACTGCCTGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558956.5
ENST00000559208.5
ENST00000559423.5
ENST00000559883.5
ENST00000559963.5
ENST00000560119.5
CDS-3UTR CAA 90 bp CCAGTTGGAGAGCGTACGTTTTCACAGGTTCTACAGCTATTAGCACATCTTGTTTGCTCTCCTATTATGTaGACTCTTCCTGGTGCTCGA +
Preference number: 5 (lower is better)
Translates to: PVGERTFSQVLQLLAHLVCSPIM*TLPGAR
Trigger: TCGAGCACCAGGAAGAGTCAACATAATAGGAGAGCA...AACAAGATGTGCTAATAGCTGTAGAACCTGTGAAAACGTACGCTCTCCAACTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000559883.5
ENST00000559963.5
ENST00000561074.5
CDS-3UTR CAA 90 bp TGCCAATGTAACGCTCACTCTTGGCACAGATTTCTGCAAGTTCCACCTTGGATAATTTGTATTGGCCAGTaGGAGAGCGTACGTTTTCAC +
Preference number: 5 (lower is better)
Translates to: CQCNAHSWHRFLQVPPWIICIGQ*ESVRFH
Trigger: GTGAAAACGTACGCTCTCCAACTGGCCAATACAAAT...TATCCAAGGTGGAACTTGCAGAAATCTGTGCCAAGAGTGAGCGTTACATTGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000559208.5
ENST00000559423.5
ENST00000559883.5
ENST00000560119.5
CDS-3UTR CAA 90 bp AGACTCCAAGCAAAGGCTACCAAGAAACCTCATGAAGTGAAACAGGACTTTGAGTACAAGGGATTTGTATaGGCCAGTTGGAGAGCGTAC +
Preference number: 5 (lower is better)
Translates to: RLQAKATKKPHEVKQDFEYKGFV*ASWRAY
Trigger: GTACGCTCTCCAACTGGCCAATACAAATCCCTTGTA...CTCAAAGTCCTGTTTCACTTCATGAGGTTTCTTGGTAGCCTTTGCTTGGAGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CAA 90 bp AGAGCGTACGTTTTCACAGGTTCTACAGCTATTAGCACATCTTGTTCTACAGCCTACAAGGGATTTGTATaGGCCAGTTGGAGAGCGTAC +
Preference number: 5 (lower is better)
Translates to: RAYVFTGSTAISTSCSTAYKGFV*ASWRAY
Trigger: GTACGCTCTCCAACTGGCCAATACAAATCCCTTGTA...GGCTGTAGAACAAGATGTGCTAATAGCTGTAGAACCTGTGAAAACGTACGCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558775.5
ENST00000559883.5
ENST00000559963.5
CDS-3UTR CAA 90 bp GAAGTTGCTGCCTTATTCATCTCCACACAACTGTTGGCAATCACAAACACTGCTTACAAGGGATTTGTATaGGCCAGTTGGAGAGCGTAC +
Preference number: 5 (lower is better)
Translates to: EVAALFISTQLLAITNTAYKGFV*ASWRAY
Trigger: GTACGCTCTCCAACTGGCCAATACAAATCCCTTGTA...AGCAGTGTTTGTGATTGCCAACAGTTGTGTGGAGATGAATAAGGCAGCAACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559423.5
ENST00000560119.5
CDS-3UTR CAA 90 bp TTTCAGCATGTCAAGGCTTCCATTCAAAAATCTAGAGCAATCCCATTGGCTGCTCCGGATACAAGGGATTaGTATTGGCCAGTTGGAGAG +
Preference number: 5 (lower is better)
Translates to: FQHVKASIQKSRAIPLAAPDTRD*YWPVGE
Trigger: CTCTCCAACTGGCCAATACAAATCCCTTGTATCCGG...AGCAGCCAATGGGATTGCTCTAGATTTTTGAATGGAAGCCTTGACATGCTGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CAA 90 bp AATTTACTGTGGCACAGAAAGTCCTGCCAATTCCTAAGTGCCCTAAGTAGTTTCCCGGATACAAGGGATTaGTATTGGCCAGTTGGAGAG +
Preference number: 5 (lower is better)
Translates to: NLLWHRKSCQFLSALSSFPDTRD*YWPVGE
Trigger: CTCTCCAACTGGCCAATACAAATCCCTTGTATCCGG...GAAACTACTTAGGGCACTTAGGAATTGGCAGGACTTTCTGTGCCACAGTAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327171.7
ENST00000396509.6
ENST00000544523.5
ENST00000559454.5
ENST00000560031.6
CDS-3UTR CAA 90 bp CAAGCAAAGGCTACCAAGAAACCTCATGAAGTGAAACAGGACTTTGAGAAGTTCCCGGATACAAGGGATTaGTATTGGCCAGTTGGAGAG +
Preference number: 5 (lower is better)
Translates to: QAKATKKPHEVKQDFEKFPDTRD*YWPVGE
Trigger: CTCTCCAACTGGCCAATACAAATCCCTTGTATCCGG...GAACTTCTCAAAGTCCTGTTTCACTTCATGAGGTTTCTTGGTAGCCTTTGCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CAA 90 bp ATCAATCTGGATGTTATTAGCACTAGTACTGAAGTCCCTCCTGCTGTGTGGCCCTTGTGCCACAAAGGCTaGGTTTTATCAATCTGGATG +
Preference number: 5 (lower is better)
Translates to: INLDVISTSTEVPPAVWPLCHKG*VLSIWM
Trigger: CATCCAGATTGATAAAACCAAGCCTTTGTGGCACAA...GGGCCACACAGCAGGAGGGACTTCAGTACTAGTGCTAATAACATCCAGATTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558956.5
ENST00000559208.5
ENST00000559423.5
CDS-3UTR CAA 90 bp TTTCATAAGCAATGTATGGTGGCACACCCAAATTACAGTGGCAGGAGAGGATACTGGAGAGGCCAGAACTaGGTGGGATATTTCCATCTA +
Preference number: 5 (lower is better)
Translates to: FHKQCMVAHPNYSGRRGYWRGQN*VGYFHL
Trigger: TAGATGGAAATATCCCACCAAGTTCTGGCCTCTCCA...GTATCCTCTCCTGCCACTGTAATTTGGGTGTGCCACCATACATTGCTTATGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CAA 90 bp AATTTACTGTGGCACAGAAAGTCCTGCCAATTCCTAAGTGCCCTAAGTAGTTTCTCTGCAAGTTCCACCTaGGATAGATTCCTTCCCAGC +
Preference number: 5 (lower is better)
Translates to: NLLWHRKSCQFLSALSSFSASST*DRFLPS
Trigger: GCTGGGAAGGAATCTATCCAAGGTGGAACTTGCAGA...GAAACTACTTAGGGCACTTAGGAATTGGCAGGACTTTCTGTGCCACAGTAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327171.7
ENST00000396509.6
ENST00000544523.5
ENST00000559454.5
ENST00000560031.6
ENST00000560119.5
CDS-3UTR CAA 90 bp AGACTCCAAGCAAAGGCTACCAAGAAACCTCATGAAGTGAAACAGGACTTTGAGCAAACACTGCTCCACTaGGGAGTTTTACATCGGTTG +
Preference number: 5 (lower is better)
Translates to: RLQAKATKKPHEVKQDFEQTLLH*GVLHRL
Trigger: CAACCGATGTAAAACTCCCAAGTGGAGCAGTGTTTG...CTCAAAGTCCTGTTTCACTTCATGAGGTTTCTTGGTAGCCTTTGCTTGGAGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CAA 90 bp AGACTCCAAGCAAAGGCTACCAAGAAACCTCATGAAGTGAAACAGGACTTTGAGTCCATCACCCTGATATaGAAATGGGAAGTTGCTGCC +
Preference number: 5 (lower is better)
Translates to: RLQAKATKKPHEVKQDFESITLI*KWEVAA
Trigger: GGCAGCAACTTCCCATTTCAATATCAGGGTGATGGA...CTCAAAGTCCTGTTTCACTTCATGAGGTTTCTTGGTAGCCTTTGCTTGGAGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CAA 90 bp TTTCATAAGCAATGTATGGTGGCACACCCAAATTACAGTGGCAGGAGAGGATACTCCAGCCTCAGTACTTaGTCCCATTGCAAGCTTTTG +
Preference number: 5 (lower is better)
Translates to: FHKQCMVAHPNYSGRRGYSSLST*SHCKLL
Trigger: CAAAAGCTTGCAATGGGACAAAGTACTGAGGCTGGA...GTATCCTCTCCTGCCACTGTAATTTGGGTGTGCCACCATACATTGCTTATGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CAA 90 bp AAATGGGAAGTTGCTGCCTTATTCATCTCCACACAACTGTTGGCAATCACAAACCACGACTCCGTCATCTaGAGTGTTTGGACTCAGGAT +
Preference number: 5 (lower is better)
Translates to: KWEVAALFISTQLLAITNHDSVI*SVWTQD
Trigger: ATCCTGAGTCCAAACACTCAAGATGACGGAGTCGTG...GTTTGTGATTGCCAACAGTTGTGTGGAGATGAATAAGGCAGCAACTTCCCATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560119.5
CDS-3UTR CAA 90 bp TATGGTGGCACACCCAAATTACAGTGGCAGGAGAGGATACATTCTTGTTACTTATGCTCTCCTATTATGTaGACTCTTCCTGGTGCTCGA +
Preference number: 5 (lower is better)
Translates to: YGGTPKLQWQERIHSCYLCSPIM*TLPGAR
Trigger: TCGAGCACCAGGAAGAGTCAACATAATAGGAGAGCA...TAAGTAACAAGAATGTATCCTCTCCTGCCACTGTAATTTGGGTGTGCCACCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CAA 90 bp AATTTACTGTGGCACAGAAAGTCCTGCCAATTCCTAAGTGCCCTAAGTAGTTTCTGCTCTCCTATTATGTaGACTCTTCCTGGTGCTCGA +
Preference number: 5 (lower is better)
Translates to: NLLWHRKSCQFLSALSSFCSPIM*TLPGAR
Trigger: TCGAGCACCAGGAAGAGTCAACATAATAGGAGAGCA...GAAACTACTTAGGGCACTTAGGAATTGGCAGGACTTTCTGTGCCACAGTAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327171.7
ENST00000396509.6
ENST00000544523.5
ENST00000559454.5
ENST00000560031.6
ENST00000560119.5
CDS-3UTR CAA 90 bp ATCTACCAGGCAGTTCATTCCAGTCAGGTTACTAAGACCAAAGTGTTCCTGAATTGCTCTCCTATTATGTaGACTCTTCCTGGTGCTCGA +
Preference number: 5 (lower is better)
Translates to: IYQAVHSSQVTKTKVFLNCSPIM*TLPGAR
Trigger: TCGAGCACCAGGAAGAGTCAACATAATAGGAGAGCA...ATTCAGGAACACTTTGGTCTTAGTAACCTGACTGGAATGAACTGCCTGGTAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000558956.5
ENST00000559208.5
ENST00000559423.5
ENST00000559883.5
ENST00000559963.5
ENST00000560119.5
CDS-3UTR CAA 90 bp CAAGCAAAGGCTACCAAGAAACCTCATGAAGTGAAACAGGACTTTGAGAAGTTCTGCTCTCCTATTATGTaGACTCTTCCTGGTGCTCGA +
Preference number: 5 (lower is better)
Translates to: QAKATKKPHEVKQDFEKFCSPIM*TLPGAR
Trigger: TCGAGCACCAGGAAGAGTCAACATAATAGGAGAGCA...GAACTTCTCAAAGTCCTGTTTCACTTCATGAGGTTTCTTGGTAGCCTTTGCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CAA 90 bp TTGTATTGGCCAGTTGGAGAGCGTACGTTTTCACAGGTTCTACAGCTATTAGCAATTTGTATTGGCCAGTaGGAGAGCGTACGTTTTCAC +
Preference number: 5 (lower is better)
Translates to: LYWPVGERTFSQVLQLLAICIGQ*ESVRFH
Trigger: GTGAAAACGTACGCTCTCCAACTGGCCAATACAAAT...TGCTAATAGCTGTAGAACCTGTGAAAACGTACGCTCTCCAACTGGCCAATACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000558775.5
ENST00000559883.5
ENST00000559963.5
CDS-3UTR CAA 90 bp TACCAGGCAGTTCATTCCAGTCAGGTTACTAAGACCAAAGTGTTCCTGAATTCCATTTGTATTGGCCAGTaGGAGAGCGTACGTTTTCAC +
Preference number: 5 (lower is better)
Translates to: YQAVHSSQVTKTKVFLNSICIGQ*ESVRFH
Trigger: GTGAAAACGTACGCTCTCCAACTGGCCAATACAAAT...GGAATTCAGGAACACTTTGGTCTTAGTAACCTGACTGGAATGAACTGCCTGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000558775.5
ENST00000558956.5
ENST00000559208.5
ENST00000559423.5
ENST00000559883.5
ENST00000559963.5
ENST00000560119.5
CDS-3UTR CAA 90 bp GGGATATTTCCATCTACCAGGCAGTTCATTCCAGTCAGGTTACTAAGACCAAAGATTTGTATTGGCCAGTaGGAGAGCGTACGTTTTCAC +
Preference number: 5 (lower is better)
Translates to: GIFPSTRQFIPVRLLRPKICIGQ*ESVRFH
Trigger: GTGAAAACGTACGCTCTCCAACTGGCCAATACAAAT...CTTTGGTCTTAGTAACCTGACTGGAATGAACTGCCTGGTAGATGGAAATATCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000558775.5
ENST00000559208.5
ENST00000559423.5
ENST00000559883.5
ENST00000559963.5
ENST00000560119.5
CDS-3UTR CAA 90 bp AATTTACTGTGGCACAGAAAGTCCTGCCAATTCCTAAGTGCCCTAAGTAGTTTCTACAAGGGATTTGTATaGGCCAGTTGGAGAGCGTAC +
Preference number: 5 (lower is better)
Translates to: NLLWHRKSCQFLSALSSFYKGFV*ASWRAY
Trigger: GTACGCTCTCCAACTGGCCAATACAAATCCCTTGTA...GAAACTACTTAGGGCACTTAGGAATTGGCAGGACTTTCTGTGCCACAGTAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327171.7
ENST00000396509.6
ENST00000544523.5
ENST00000559454.5
ENST00000560031.6
ENST00000560119.5
CDS-3UTR CAA 90 bp ATCTTATTCTTCACTACATACCAAAGCAAAGCCTTCACTCTCACTGAGCCTCCTTACAAGGGATTTGTATaGGCCAGTTGGAGAGCGTAC +
Preference number: 5 (lower is better)
Translates to: ILFFTTYQSKAFTLTEPPYKGFV*ASWRAY
Trigger: GTACGCTCTCCAACTGGCCAATACAAATCCCTTGTA...AGGAGGCTCAGTGAGAGTGAAGGCTTTGCTTTGGTATGTAGTGAAGAATAAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CAA 90 bp AATTTACTGTGGCACAGAAAGTCCTGCCAATTCCTAAGTGCCCTAAGTAGTTTCTGGAGAGGCCAGAACTaGGTGGGATATTTCCATCTA +
Preference number: 5 (lower is better)
Translates to: NLLWHRKSCQFLSALSSFWRGQN*VGYFHL
Trigger: TAGATGGAAATATCCCACCAAGTTCTGGCCTCTCCA...GAAACTACTTAGGGCACTTAGGAATTGGCAGGACTTTCTGTGCCACAGTAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327171.7
ENST00000396509.6
ENST00000544523.5
ENST00000559454.5
ENST00000560031.6
ENST00000560119.5
CDS-3UTR CAA 90 bp ATATTTCCATCTACCAGGCAGTTCATTCCAGTCAGGTTACTAAGACCAAAGTGTTCTGCAAGTTCCACCTaGGATAGATTCCTTCCCAGC +
Preference number: 5 (lower is better)
Translates to: IFPSTRQFIPVRLLRPKCSASST*DRFLPS
Trigger: GCTGGGAAGGAATCTATCCAAGGTGGAACTTGCAGA...ACACTTTGGTCTTAGTAACCTGACTGGAATGAACTGCCTGGTAGATGGAAATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000559208.5
ENST00000559423.5
ENST00000559883.5
ENST00000560119.5
CDS-3UTR CAA 90 bp TCCGAAGCTGAAATTGAGAGAGAATGTGTGGCATCACTATCGTCATCATCATCACAAACACTGCTCCACTaGGGAGTTTTACATCGGTTG +
Preference number: 5 (lower is better)
Translates to: SEAEIERECVASLSSSSSQTLLH*GVLHRL
Trigger: CAACCGATGTAAAACTCCCAAGTGGAGCAGTGTTTG...TGATGATGATGACGATAGTGATGCCACACATTCTCTCTCAATTTCAGCTTCGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CAA 90 bp AATTTACTGTGGCACAGAAAGTCCTGCCAATTCCTAAGTGCCCTAAGTAGTTTCCAAACACTGCTCCACTaGGGAGTTTTACATCGGTTG +
Preference number: 5 (lower is better)
Translates to: NLLWHRKSCQFLSALSSFQTLLH*GVLHRL
Trigger: CAACCGATGTAAAACTCCCAAGTGGAGCAGTGTTTG...GAAACTACTTAGGGCACTTAGGAATTGGCAGGACTTTCTGTGCCACAGTAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327171.7
ENST00000396509.6
ENST00000544523.5
ENST00000559454.5
ENST00000560031.6
ENST00000560119.5
CDS-3UTR CAA 90 bp TTTCATAAGCAATGTATGGTGGCACACCCAAATTACAGTGGCAGGAGAGGATACATCTCCACACAACTGTaGGCAATCACAAACACTGCT +
Preference number: 5 (lower is better)
Translates to: FHKQCMVAHPNYSGRRGYISTQL*AITNTA
Trigger: AGCAGTGTTTGTGATTGCCAACAGTTGTGTGGAGAT...GTATCCTCTCCTGCCACTGTAATTTGGGTGTGCCACCATACATTGCTTATGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CAA 90 bp AATTTACTGTGGCACAGAAAGTCCTGCCAATTCCTAAGTGCCCTAAGTAGTTTCTCCATCACCCTGATATaGAAATGGGAAGTTGCTGCC +
Preference number: 5 (lower is better)
Translates to: NLLWHRKSCQFLSALSSFSITLI*KWEVAA
Trigger: GGCAGCAACTTCCCATTTCAATATCAGGGTGATGGA...GAAACTACTTAGGGCACTTAGGAATTGGCAGGACTTTCTGTGCCACAGTAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327171.7
ENST00000396509.6
ENST00000544523.5
ENST00000559454.5
ENST00000560031.6
ENST00000560119.5
CDS-3UTR CAA 90 bp TTGAAATGGGAAGTTGCTGCCTTATTCATCTCCACACAACTGTTGGCAATCACATCCATCACCCTGATATaGAAATGGGAAGTTGCTGCC +
Preference number: 5 (lower is better)
Translates to: LKWEVAALFISTQLLAITSITLI*KWEVAA
Trigger: GGCAGCAACTTCCCATTTCAATATCAGGGTGATGGA...TGTGATTGCCAACAGTTGTGTGGAGATGAATAAGGCAGCAACTTCCCATTTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559423.5
ENST00000560119.5
CDS-3UTR CAA 90 bp ATCTTATTCTTCACTACATACCAAAGCAAAGCCTTCACTCTCACTGAGCCTCCTTCCATCACCCTGATATaGAAATGGGAAGTTGCTGCC +
Preference number: 5 (lower is better)
Translates to: ILFFTTYQSKAFTLTEPPSITLI*KWEVAA
Trigger: GGCAGCAACTTCCCATTTCAATATCAGGGTGATGGA...AGGAGGCTCAGTGAGAGTGAAGGCTTTGCTTTGGTATGTAGTGAAGAATAAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CAA 90 bp TATGGTGGCACACCCAAATTACAGTGGCAGGAGAGGATACATTCTTGTTACTTATCCAGCCTCAGTACTTaGTCCCATTGCAAGCTTTTG +
Preference number: 5 (lower is better)
Translates to: YGGTPKLQWQERIHSCYLSSLST*SHCKLL
Trigger: CAAAAGCTTGCAATGGGACAAAGTACTGAGGCTGGA...TAAGTAACAAGAATGTATCCTCTCCTGCCACTGTAATTTGGGTGTGCCACCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CAA 90 bp AATTTACTGTGGCACAGAAAGTCCTGCCAATTCCTAAGTGCCCTAAGTAGTTTCTCCAGCCTCAGTACTTaGTCCCATTGCAAGCTTTTG +
Preference number: 5 (lower is better)
Translates to: NLLWHRKSCQFLSALSSFSSLST*SHCKLL
Trigger: CAAAAGCTTGCAATGGGACAAAGTACTGAGGCTGGA...GAAACTACTTAGGGCACTTAGGAATTGGCAGGACTTTCTGTGCCACAGTAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327171.7
ENST00000396509.6
ENST00000544523.5
ENST00000559454.5
ENST00000560031.6
ENST00000560119.5
CDS-3UTR CAA 90 bp ACTATAGTAGTACTGGTCCAGAGTTTAATCGTGTTCTCTTCAATTTTGGAGGTCGTTTGGACTCAGGATTaGGGTTCGGAGTTCCTCCAG +
Preference number: 5 (lower is better)
Translates to: TIVVLVQSLIVFSSILEVVWTQD*GSEFLQ
Trigger: CTGGAGGAACTCCGAACCCAAATCCTGAGTCCAAAC...GACCTCCAAAATTGAAGAGAACACGATTAAACTCTGGACCAGTACTACTATAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558399.5
ENST00000559580.5
CDS-3UTR CAA 90 bp TTTGCCTATACCCATAGGCTTTGCTCATCTGCAGTGTGCACTCCACAGCTTTTAAAATGCTGCCTGGATTaGACTCTTCAAAAGCTAGCT +
Preference number: 5 (lower is better)
Translates to: FAYTHRLCSSAVCTPQLLKCCLD*TLQKLA
Trigger: AGCTAGCTTTTGAAGAGTCAAATCCAGGCAGCATTT...TAAAAGCTGTGGAGTGCACACTGCAGATGAGCAAAGCCTATGGGTATAGGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CAA 90 bp CACATACCTGCATACCTGCTTTACAATGGGGTGCATATATACAAACAAGCTTTGCTGAATGCTGGACAATaGGAGGTCAGGGATAGAGGA +
Preference number: 5 (lower is better)
Translates to: HIPAYLLYNGVHIYKQALLNAGQ*EVRDRG
Trigger: TCCTCTATCCCTGACCTCCAATTGTCCAGCATTCAG...CAAAGCTTGTTTGTATATATGCACCCCATTGTAAAGCAGGTATGCAGGTATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CAA 90 bp TTTCAGCATGTCAAGGCTTCCATTCAAAAATCTAGAGCAATCCCATTGGCTGCTATTTGTATTGGCCAGTaGGAGAGCGTACGTTTTCAC +
Preference number: 5 (lower is better)
Translates to: FQHVKASIQKSRAIPLAAICIGQ*ESVRFH
Trigger: GTGAAAACGTACGCTCTCCAACTGGCCAATACAAAT...AGCAGCCAATGGGATTGCTCTAGATTTTTGAATGGAAGCCTTGACATGCTGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CAA 90 bp AATTTACTGTGGCACAGAAAGTCCTGCCAATTCCTAAGTGCCCTAAGTAGTTTCATTTGTATTGGCCAGTaGGAGAGCGTACGTTTTCAC +
Preference number: 5 (lower is better)
Translates to: NLLWHRKSCQFLSALSSFICIGQ*ESVRFH
Trigger: GTGAAAACGTACGCTCTCCAACTGGCCAATACAAAT...GAAACTACTTAGGGCACTTAGGAATTGGCAGGACTTTCTGTGCCACAGTAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327171.7
ENST00000396509.6
ENST00000544523.5
ENST00000559454.5
ENST00000560031.6
ENST00000560119.5
CDS-3UTR CAA 90 bp TATGGTGGCACACCCAAATTACAGTGGCAGGAGAGGATACATTCTTGTTACTTAATTTGTATTGGCCAGTaGGAGAGCGTACGTTTTCAC +
Preference number: 5 (lower is better)
Translates to: YGGTPKLQWQERIHSCYLICIGQ*ESVRFH
Trigger: GTGAAAACGTACGCTCTCCAACTGGCCAATACAAAT...TAAGTAACAAGAATGTATCCTCTCCTGCCACTGTAATTTGGGTGTGCCACCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CAA 90 bp ATTCATCTCCACACAACTGTTGGCAATCACAAACACTGCTCCACTTGGGAGTTTTTGTGCCACAAAGGCTaGGTTTTATCAATCTGGATG +
Preference number: 5 (lower is better)
Translates to: IHLHTTVGNHKHCSTWEFLCHKG*VLSIWM
Trigger: CATCCAGATTGATAAAACCAAGCCTTTGTGGCACAA...AAACTCCCAAGTGGAGCAGTGTTTGTGATTGCCAACAGTTGTGTGGAGATGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000559423.5
ENST00000560119.5
CDS-3UTR CAA 90 bp AGACTCCAAGCAAAGGCTACCAAGAAACCTCATGAAGTGAAACAGGACTTTGAGTTGTGCCACAAAGGCTaGGTTTTATCAATCTGGATG +
Preference number: 5 (lower is better)
Translates to: RLQAKATKKPHEVKQDFELCHKG*VLSIWM
Trigger: CATCCAGATTGATAAAACCAAGCCTTTGTGGCACAA...CTCAAAGTCCTGTTTCACTTCATGAGGTTTCTTGGTAGCCTTTGCTTGGAGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CAA 90 bp AATTTACTGTGGCACAGAAAGTCCTGCCAATTCCTAAGTGCCCTAAGTAGTTTCATCTCCACACAACTGTaGGCAATCACAAACACTGCT +
Preference number: 5 (lower is better)
Translates to: NLLWHRKSCQFLSALSSFISTQL*AITNTA
Trigger: AGCAGTGTTTGTGATTGCCAACAGTTGTGTGGAGAT...GAAACTACTTAGGGCACTTAGGAATTGGCAGGACTTTCTGTGCCACAGTAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327171.7
ENST00000396509.6
ENST00000544523.5
ENST00000559454.5
ENST00000560031.6
ENST00000560119.5
CDS-3UTR CAA 90 bp AAATGGGAAGTTGCTGCCTTATTCATCTCCACACAACTGTTGGCAATCACAAACATCTCCACACAACTGTaGGCAATCACAAACACTGCT +
Preference number: 5 (lower is better)
Translates to: KWEVAALFISTQLLAITNISTQL*AITNTA
Trigger: AGCAGTGTTTGTGATTGCCAACAGTTGTGTGGAGAT...GTTTGTGATTGCCAACAGTTGTGTGGAGATGAATAAGGCAGCAACTTCCCATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559423.5
ENST00000560119.5
CDS-3UTR CAA 90 bp AATTTACTGTGGCACAGAAAGTCCTGCCAATTCCTAAGTGCCCTAAGTAGTTTCTCCCATTGCAAGCTTTaGTATTTAGCCAGGAGCTTC +
Preference number: 5 (lower is better)
Translates to: NLLWHRKSCQFLSALSSFSHCKL*YLARSF
Trigger: GAAGCTCCTGGCTAAATACAAAAGCTTGCAATGGGA...GAAACTACTTAGGGCACTTAGGAATTGGCAGGACTTTCTGTGCCACAGTAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327171.7
ENST00000396509.6
ENST00000544523.5
ENST00000559454.5
ENST00000560031.6
ENST00000560119.5
CDS-3UTR CAA 90 bp TATGGTGGCACACCCAAATTACAGTGGCAGGAGAGGATACATTCTTGTTACTTATCCCATTGCAAGCTTTaGTATTTAGCCAGGAGCTTC +
Preference number: 5 (lower is better)
Translates to: YGGTPKLQWQERIHSCYLSHCKL*YLARSF
Trigger: GAAGCTCCTGGCTAAATACAAAAGCTTGCAATGGGA...TAAGTAACAAGAATGTATCCTCTCCTGCCACTGTAATTTGGGTGTGCCACCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CAA 90 bp TTCAGTGCCAATGTAACGCTCACTCTTGGCACAGATTTCTGCAAGTTCCACCTTCAGTACTTTGTCCCATaGCAAGCTTTTGTATTTAGC +
Preference number: 5 (lower is better)
Translates to: FSANVTLTLGTDFCKFHLQYFVP*QAFVFS
Trigger: GCTAAATACAAAAGCTTGCAATGGGACAAAGTACTG...AAGGTGGAACTTGCAGAAATCTGTGCCAAGAGTGAGCGTTACATTGGCACTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560119.5
CDS-3UTR CAA 90 bp CAAGCAAAGGCTACCAAGAAACCTCATGAAGTGAAACAGGACTTTGAGAAGTTCGAAGATGAGCACATCTaGAGTGTTTGGACTCAGGAT +
Preference number: 5 (lower is better)
Translates to: QAKATKKPHEVKQDFEKFEDEHI*SVWTQD
Trigger: ATCCTGAGTCCAAACACTCAAGATGTGCTCATCTTC...GAACTTCTCAAAGTCCTGTTTCACTTCATGAGGTTTCTTGGTAGCCTTTGCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CAA 90 bp AATTTACTGTGGCACAGAAAGTCCTGCCAATTCCTAAGTGCCCTAAGTAGTTTCGAAGATGAGCACATCTaGAGTGTTTGGACTCAGGAT +
Preference number: 5 (lower is better)
Translates to: NLLWHRKSCQFLSALSSFEDEHI*SVWTQD
Trigger: ATCCTGAGTCCAAACACTCAAGATGTGCTCATCTTC...GAAACTACTTAGGGCACTTAGGAATTGGCAGGACTTTCTGTGCCACAGTAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327171.7
ENST00000396509.6
ENST00000544523.5
ENST00000559454.5
ENST00000560031.6
CDS-3UTR CAA 90 bp TTATTTTCTTCCTCTTACAGTCGCACTATAGTAGTACTGGTCCAGAGTTTAATCAGAAAGCTGGGCAGCTaGTCCGCAGGTACCATTGAT +
Preference number: 5 (lower is better)
Translates to: LFSSSYSRTIVVLVQSLIRKLGS*SAGTID
Trigger: ATCAATGGTACCTGCGGACAAGCTGCCCAGCTTTCT...GATTAAACTCTGGACCAGTACTACTATAGTGCGACTGTAAGAGGAAGAAAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559580.5
CDS-3UTR CAA 90 bp TTTCAGCATGTCAAGGCTTCCATTCAAAAATCTAGAGCAATCCCATTGGCTGCTCCAACCACAAATCCTTaGTGGAAAATGGCACGGTAT +
Preference number: 5 (lower is better)
Translates to: FQHVKASIQKSRAIPLAAPTTNP*WKMARY
Trigger: ATACCGTGCCATTTTCCACAAAGGATTTGTGGTTGG...AGCAGCCAATGGGATTGCTCTAGATTTTTGAATGGAAGCCTTGACATGCTGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CAA 90 bp ATCTTATTCTTCACTACATACCAAAGCAAAGCCTTCACTCTCACTGAGCCTCCTCTACACACACCATGTTaGCCTATACCCATAGGCTTT +
Preference number: 5 (lower is better)
Translates to: ILFFTTYQSKAFTLTEPPLHTPC*PIPIGF
Trigger: AAAGCCTATGGGTATAGGCAAACATGGTGTGTGTAG...AGGAGGCTCAGTGAGAGTGAAGGCTTTGCTTTGGTATGTAGTGAAGAATAAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CAA 90 bp ATGCCCTGTAGAAATGTTGGACAAGTAGTATCAGATATTCCACCACTCAGTAATCTGAATGCTGGACAATaGGAGGTCAGGGATAGAGGA +
Preference number: 5 (lower is better)
Translates to: MPCRNVGQVVSDIPPLSNLNAGQ*EVRDRG
Trigger: TCCTCTATCCCTGACCTCCAATTGTCCAGCATTCAG...ATTACTGAGTGGTGGAATATCTGATACTACTTGTCCAACATTTCTACAGGGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CAA 90 bp ACTGGTCCAGAGTTTAATCGTGTTCTCTTCAATTTTGGAGGTCAGAGTCCATTGAAAGCACCTCCAGGTTaGGTAGCAAACAAACTTTGC +
Preference number: 5 (lower is better)
Translates to: TGPEFNRVLFNFGGQSPLKAPPG*VANKLC
Trigger: GCAAAGTTTGTTTGCTACCAAACCTGGAGGTGCTTT...CAATGGACTCTGACCTCCAAAATTGAAGAGAACACGATTAAACTCTGGACCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559580.5
CDS CCA 90 bp ACTGACCCTTTTTATTTCGGATACAAGGGATTTGTATTGGCCAGTTaGAGAGCGTACGTTTTCACAGGTTCTACAGCTATTAGCACATCT +
Preference number: 5 (lower is better)
Translates to: TDPFYFGYKGFVLAS*RAYVFTGSTAISTS
Trigger: AGATGTGCTAATAGCTGTAGAACCTGTGAAAACGTACGCTCTCCAACTGGCCAATACAAATCCCTTGTATCCGAAATAAAAAGGGTCAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560119.5
CDS-3UTR CAA 90 bp AAAGGCTTGGTTTTATCAATCTGGATGTTATTAGCACTAGTACTGAAGTCCCTCTACAAGGGATTTGTATaGGCCAGTTGGAGAGCGTAC +
Preference number: 5 (lower is better)
Translates to: KGLVLSIWMLLALVLKSLYKGFV*ASWRAY
Trigger: GTACGCTCTCCAACTGGCCAATACAAATCCCTTGTA...GAGGGACTTCAGTACTAGTGCTAATAACATCCAGATTGATAAAACCAAGCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558956.5
ENST00000559208.5
ENST00000559423.5
CDS-3UTR CAA 90 bp TCAATCTGGATGTTATTAGCACTAGTACTGAAGTCCGGATACAAGGGATTTGTATACAAGGGATTTGTATaGGCCAGTTGGAGAGCGTAC +
Preference number: 5 (lower is better)
Translates to: SIWMLLALVLKSGYKGFVYKGFV*ASWRAY
Trigger: GTACGCTCTCCAACTGGCCAATACAAATCCCTTGTA...TACAAATCCCTTGTATCCGGACTTCAGTACTAGTGCTAATAACATCCAGATTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000558775.5
ENST00000559883.5
ENST00000559963.5
CDS-3UTR CAA 90 bp TCCGAAGCTGAAATTGAGAGAGAATGTGTGGCATCACTATCGTCATCATCATCATTGTGCCACAAAGGCTaGGTTTTATCAATCTGGATG +
Preference number: 5 (lower is better)
Translates to: SEAEIERECVASLSSSSSLCHKG*VLSIWM
Trigger: CATCCAGATTGATAAAACCAAGCCTTTGTGGCACAA...TGATGATGATGACGATAGTGATGCCACACATTCTCTCTCAATTTCAGCTTCGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CAA 90 bp AATTTACTGTGGCACAGAAAGTCCTGCCAATTCCTAAGTGCCCTAAGTAGTTTCTTGTGCCACAAAGGCTaGGTTTTATCAATCTGGATG +
Preference number: 5 (lower is better)
Translates to: NLLWHRKSCQFLSALSSFLCHKG*VLSIWM
Trigger: CATCCAGATTGATAAAACCAAGCCTTTGTGGCACAA...GAAACTACTTAGGGCACTTAGGAATTGGCAGGACTTTCTGTGCCACAGTAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327171.7
ENST00000396509.6
ENST00000544523.5
ENST00000559454.5
ENST00000560031.6
ENST00000560119.5
CDS-3UTR CAA 90 bp CACATACCTGCATACCTGCTTTACAATGGGGTGCATATATACAAACAAGCTTTGTCCCATTGCAAGCTTTaGTATTTAGCCAGGAGCTTC +
Preference number: 5 (lower is better)
Translates to: HIPAYLLYNGVHIYKQALSHCKL*YLARSF
Trigger: GAAGCTCCTGGCTAAATACAAAAGCTTGCAATGGGA...CAAAGCTTGTTTGTATATATGCACCCCATTGTAAAGCAGGTATGCAGGTATGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CAA 90 bp AGTAGTACTGGTCCAGAGTTTAATCGTGTTCTCTTCAATTTTGGAGGTCAGAGTTCCCATTGCAAGCTTTaGTATTTAGCCAGGAGCTTC +
Preference number: 5 (lower is better)
Translates to: SSTGPEFNRVLFNFGGQSSHCKL*YLARSF
Trigger: GAAGCTCCTGGCTAAATACAAAAGCTTGCAATGGGA...ACTCTGACCTCCAAAATTGAAGAGAACACGATTAAACTCTGGACCAGTACTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558399.5
CDS-3UTR CAA 90 bp AGTCGCACTATAGTAGTACTGGTCCAGAGTTTAATCGTGTTCTCTTCAATTTTGTCCAGCCTCAGTACTTaGTCCCATTGCAAGCTTTTG +
Preference number: 5 (lower is better)
Translates to: SRTIVVLVQSLIVFSSILSSLST*SHCKLL
Trigger: CAAAAGCTTGCAATGGGACAAAGTACTGAGGCTGGA...CAAAATTGAAGAGAACACGATTAAACTCTGGACCAGTACTACTATAGTGCGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558399.5
CDS-3UTR CAA 90 bp GCAGGAGAGGATACATTCTTGTTACTTAATCATCTACATGCACATGTAAGAAAAGCCCCACCTCCAGGTTaGGTAGCAAACAAACTTTGC +
Preference number: 5 (lower is better)
Translates to: AGEDTFLLLNHLHAHVRKAPPPG*VANKLC
Trigger: GCAAAGTTTGTTTGCTACCAAACCTGGAGGTGGGGC...TTTTCTTACATGTGCATGTAGATGATTAAGTAACAAGAATGTATCCTCTCCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CAA 90 bp AGACTCCAAGCAAAGGCTACCAAGAAACCTCATGAAGTGAAACAGGACTTTGAGCATTTCTGCCCACTCTaGATATACATACAGAGATAC +
Preference number: 5 (lower is better)
Translates to: RLQAKATKKPHEVKQDFEHFCPL*IYIQRY
Trigger: GTATCTCTGTATGTATATCAAGAGTGGGCAGAAATG...CTCAAAGTCCTGTTTCACTTCATGAGGTTTCTTGGTAGCCTTTGCTTGGAGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CAA 90 bp AGACTCCAAGCAAAGGCTACCAAGAAACCTCATGAAGTGAAACAGGACTTTGAGCATGCCATAAAACCATaGCTATCTCAATTACCTGAG +
Preference number: 5 (lower is better)
Translates to: RLQAKATKKPHEVKQDFEHAIKP*LSQLPE
Trigger: CTCAGGTAATTGAGATAGCAATGGTTTTATGGCATG...CTCAAAGTCCTGTTTCACTTCATGAGGTTTCTTGGTAGCCTTTGCTTGGAGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CAA 90 bp CACATACCTGCATACCTGCTTTACAATGGGGTGCATATATACAAACAAGCTTTGCCAACCACAAATCCTTaGTGGAAAATGGCACGGTAT +
Preference number: 5 (lower is better)
Translates to: HIPAYLLYNGVHIYKQALPTTNP*WKMARY
Trigger: ATACCGTGCCATTTTCCACAAAGGATTTGTGGTTGG...CAAAGCTTGTTTGTATATATGCACCCCATTGTAAAGCAGGTATGCAGGTATGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CAA 90 bp CACATACCTGCATACCTGCTTTACAATGGGGTGCATATATACAAACAAGCTTTGCTACACACACCATGTTaGCCTATACCCATAGGCTTT +
Preference number: 5 (lower is better)
Translates to: HIPAYLLYNGVHIYKQALLHTPC*PIPIGF
Trigger: AAAGCCTATGGGTATAGGCAAACATGGTGTGTGTAG...CAAAGCTTGTTTGTATATATGCACCCCATTGTAAAGCAGGTATGCAGGTATGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CAA 90 bp GGACAATATTTCATAAGCAATGTATGGTGGCACACCCAAATTACAGTGGCAGGAAAATGCTGCCTGGATTaGACTCTTCAAAAGCTAGCT +
Preference number: 5 (lower is better)
Translates to: GQYFISNVWWHTQITVAGKCCLD*TLQKLA
Trigger: AGCTAGCTTTTGAAGAGTCAAATCCAGGCAGCATTT...TCCTGCCACTGTAATTTGGGTGTGCCACCATACATTGCTTATGAAATATTGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CAA 90 bp CAAGCAAAGGCTACCAAGAAACCTCATGAAGTGAAACAGGACTTTGAGAAGTTCTCTAGAGCAATCCCATaGGCTGCTAGTATAATGTCA +
Preference number: 5 (lower is better)
Translates to: QAKATKKPHEVKQDFEKFSRAIP*AASIMS
Trigger: TGACATTATACTAGCAGCCAATGGGATTGCTCTAGA...GAACTTCTCAAAGTCCTGTTTCACTTCATGAGGTTTCTTGGTAGCCTTTGCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CAA 90 bp TATGGTGGCACACCCAAATTACAGTGGCAGGAGAGGATACATTCTTGTTACTTATCTAGAGCAATCCCATaGGCTGCTAGTATAATGTCA +
Preference number: 5 (lower is better)
Translates to: YGGTPKLQWQERIHSCYLSRAIP*AASIMS
Trigger: TGACATTATACTAGCAGCCAATGGGATTGCTCTAGA...TAAGTAACAAGAATGTATCCTCTCCTGCCACTGTAATTTGGGTGTGCCACCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CAA 90 bp TTTGCCTATACCCATAGGCTTTGCTCATCTGCAGTGTGCACTCCACAGCTTTTATTCAACAAAATCATATaGGGTACCAACAGCTGTGTT +
Preference number: 5 (lower is better)
Translates to: FAYTHRLCSSAVCTPQLLFNKII*GTNSCV
Trigger: AACACAGCTGTTGGTACCCAATATGATTTTGTTGAA...TAAAAGCTGTGGAGTGCACACTGCAGATGAGCAAAGCCTATGGGTATAGGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CAA 90 bp AAAGGCTTGGTTTTATCAATCTGGATGTTATTAGCACTAGTACTGAAGTCCCTCACGGATACAAGGGATTaGTATTGGCCAGTTGGAGAG +
Preference number: 5 (lower is better)
Translates to: KGLVLSIWMLLALVLKSLTDTRD*YWPVGE
Trigger: CTCTCCAACTGGCCAATACAAATCCCTTGTATCCGT...GAGGGACTTCAGTACTAGTGCTAATAACATCCAGATTGATAAAACCAAGCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558956.5
ENST00000559208.5
ENST00000559423.5
CDS-3UTR CAA 90 bp ACAATAATCTATATGCTCTCCTATTATGTTGACTCTTCCTGGTGCTCGAACATATACAAGGGATTTGTATaGGCCAGTTGGAGAGCGTAC +
Preference number: 5 (lower is better)
Translates to: TIIYMLSYYVDSSWCSNIYKGFV*ASWRAY
Trigger: GTACGCTCTCCAACTGGCCAATACAAATCCCTTGTA...TATGTTCGAGCACCAGGAAGAGTCAACATAATAGGAGAGCATATAGATTATTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559883.5
ENST00000559963.5
CDS-3UTR CAA 90 bp TTTATCAATCTGGATGTTATTAGCACTAGTACTGAAGTCCGGATACAAGGGATTTGGAGAGGCCAGAACTaGGTGGGATATTTCCATCTA +
Preference number: 5 (lower is better)
Translates to: FINLDVISTSTEVRIQGIWRGQN*VGYFHL
Trigger: TAGATGGAAATATCCCACCAAGTTCTGGCCTCTCCA...AATCCCTTGTATCCGGACTTCAGTACTAGTGCTAATAACATCCAGATTGATAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000558775.5
ENST00000559883.5
ENST00000559963.5
CDS-3UTR CAA 90 bp GCAGGAGAGGATACATTCTTGTTACTTAATCATCTACATGCACATGTAAGAAAATCTGCAAGTTCCACCTaGGATAGATTCCTTCCCAGC +
Preference number: 5 (lower is better)
Translates to: AGEDTFLLLNHLHAHVRKSASST*DRFLPS
Trigger: GCTGGGAAGGAATCTATCCAAGGTGGAACTTGCAGA...TTTTCTTACATGTGCATGTAGATGATTAAGTAACAAGAATGTATCCTCTCCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CAA 90 bp ATGCCCTGTAGAAATGTTGGACAAGTAGTATCAGATATTCCACCACTCAGTAATATCTCCACACAACTGTaGGCAATCACAAACACTGCT +
Preference number: 5 (lower is better)
Translates to: MPCRNVGQVVSDIPPLSNISTQL*AITNTA
Trigger: AGCAGTGTTTGTGATTGCCAACAGTTGTGTGGAGAT...ATTACTGAGTGGTGGAATATCTGATACTACTTGTCCAACATTTCTACAGGGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CAA 90 bp AATTTACTGTGGCACAGAAAGTCCTGCCAATTCCTAAGTGCCCTAAGTAGTTTCCAGTACTTTGTCCCATaGCAAGCTTTTGTATTTAGC +
Preference number: 5 (lower is better)
Translates to: NLLWHRKSCQFLSALSSFQYFVP*QAFVFS
Trigger: GCTAAATACAAAAGCTTGCAATGGGACAAAGTACTG...GAAACTACTTAGGGCACTTAGGAATTGGCAGGACTTTCTGTGCCACAGTAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327171.7
ENST00000396509.6
ENST00000544523.5
ENST00000559454.5
ENST00000560031.6
ENST00000560119.5
CDS-3UTR CAA 90 bp TCCTCTTACAGTCGCACTATAGTAGTACTGGTCCAGAGTTTAATCGTGTTCTCTCAGTACTTTGTCCCATaGCAAGCTTTTGTATTTAGC +
Preference number: 5 (lower is better)
Translates to: SSYSRTIVVLVQSLIVFSQYFVP*QAFVFS
Trigger: GCTAAATACAAAAGCTTGCAATGGGACAAAGTACTG...AGAGAACACGATTAAACTCTGGACCAGTACTACTATAGTGCGACTGTAAGAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558399.5
CDS-3UTR CAA 90 bp CAAGCAAAGGCTACCAAGAAACCTCATGAAGTGAAACAGGACTTTGAGAAGTTCCAGTACTTTGTCCCATaGCAAGCTTTTGTATTTAGC +
Preference number: 5 (lower is better)
Translates to: QAKATKKPHEVKQDFEKFQYFVP*QAFVFS
Trigger: GCTAAATACAAAAGCTTGCAATGGGACAAAGTACTG...GAACTTCTCAAAGTCCTGTTTCACTTCATGAGGTTTCTTGGTAGCCTTTGCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CAA 90 bp CACTATAGTAGTACTGGTCCAGAGTTTAATCGTGTTCTCTTCAATTTTGGAGGTGAAGATGAGCACATCTaGAGTGTTTGGACTCAGGAT +
Preference number: 5 (lower is better)
Translates to: HYSSTGPEFNRVLFNFGGEDEHI*SVWTQD
Trigger: ATCCTGAGTCCAAACACTCAAGATGTGCTCATCTTC...ACCTCCAAAATTGAAGAGAACACGATTAAACTCTGGACCAGTACTACTATAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558399.5
ENST00000559580.5
CDS-3UTR CAA 90 bp ATGCCCTGTAGAAATGTTGGACAAGTAGTATCAGATATTCCACCACTCAGTAATGAAGATGAGCACATCTaGAGTGTTTGGACTCAGGAT +
Preference number: 5 (lower is better)
Translates to: MPCRNVGQVVSDIPPLSNEDEHI*SVWTQD
Trigger: ATCCTGAGTCCAAACACTCAAGATGTGCTCATCTTC...ATTACTGAGTGGTGGAATATCTGATACTACTTGTCCAACATTTCTACAGGGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CAA 90 bp TTTCAGCATGTCAAGGCTTCCATTCAAAAATCTAGAGCAATCCCATTGGCTGCTAATGTGTGGAATTTCTaGGAAGTGCCTCTTGGATTA +
Preference number: 5 (lower is better)
Translates to: FQHVKASIQKSRAIPLAANVWNF*EVPLGL
Trigger: TAATCCAAGAGGCACTTCCAAGAAATTCCACACATT...AGCAGCCAATGGGATTGCTCTAGATTTTTGAATGGAAGCCTTGACATGCTGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CAA 90 bp CAAGCAAAGGCTACCAAGAAACCTCATGAAGTGAAACAGGACTTTGAGAAGTTCAATGTGTGGAATTTCTaGGAAGTGCCTCTTGGATTA +
Preference number: 5 (lower is better)
Translates to: QAKATKKPHEVKQDFEKFNVWNF*EVPLGL
Trigger: TAATCCAAGAGGCACTTCCAAGAAATTCCACACATT...GAACTTCTCAAAGTCCTGTTTCACTTCATGAGGTTTCTTGGTAGCCTTTGCTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CAA 90 bp TCCGAAGCTGAAATTGAGAGAGAATGTGTGGCATCACTATCGTCATCATCATCACATTTCTGCCCACTCTaGATATACATACAGAGATAC +
Preference number: 5 (lower is better)
Translates to: SEAEIERECVASLSSSSSHFCPL*IYIQRY
Trigger: GTATCTCTGTATGTATATCAAGAGTGGGCAGAAATG...TGATGATGATGACGATAGTGATGCCACACATTCTCTCTCAATTTCAGCTTCGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CAA 90 bp ATGCCCTGTAGAAATGTTGGACAAGTAGTATCAGATATTCCACCACTCAGTAATGAAATAAAACTAGCTTaGCGCAGGCCTCCCTTAAAC +
Preference number: 5 (lower is better)
Translates to: MPCRNVGQVVSDIPPLSNEIKLA*RRPPLN
Trigger: GTTTAAGGGAGGCCTGCGCAAAGCTAGTTTTATTTC...ATTACTGAGTGGTGGAATATCTGATACTACTTGTCCAACATTTCTACAGGGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS CCA 90 bp AAGGAAATTGATAAATTCGGATACAAGGGATTTGTATTGGCCAGTTaGAGAGCGTACGTTTTCACAGGTTCTACAGCTATTAGCACATCT +
Preference number: 5 (lower is better)
Translates to: KEIDKFGYKGFVLAS*RAYVFTGSTAISTS
Trigger: AGATGTGCTAATAGCTGTAGAACCTGTGAAAACGTACGCTCTCCAACTGGCCAATACAAATCCCTTGTATCCGAATTTATCAATTTCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559040.1
CDS-3UTR CAA 90 bp TCCGAAGCTGAAATTGAGAGAGAATGTGTGGCATCACTATCGTCATCATCATCAGGAATAGATCCAAACTaGGAGTTAAACATCTCCTTT +
Preference number: 5 (lower is better)
Translates to: SEAEIERECVASLSSSSSGIDPN*ELNISF
Trigger: AAAGGAGATGTTTAACTCCAAGTTTGGATCTATTCC...TGATGATGATGACGATAGTGATGCCACACATTCTCTCTCAATTTCAGCTTCGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CAA 90 bp TTATCAATCTGGATGTTATTAGCACTAGTACTGAAGTCCGGATACAAGGGATTTATTTGTATTGGCCAGTaGGAGAGCGTACGTTTTCAC +
Preference number: 5 (lower is better)
Translates to: LSIWMLLALVLKSGYKGFICIGQ*ESVRFH
Trigger: GTGAAAACGTACGCTCTCCAACTGGCCAATACAAAT...AAATCCCTTGTATCCGGACTTCAGTACTAGTGCTAATAACATCCAGATTGATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558775.5
ENST00000559883.5
ENST00000559963.5
CDS-3UTR CAA 90 bp AGGCTTGGTTTTATCAATCTGGATGTTATTAGCACTAGTACTGAAGTCCGGATATTGTGCCACAAAGGCTaGGTTTTATCAATCTGGATG +
Preference number: 5 (lower is better)
Translates to: RLGFINLDVISTSTEVRILCHKG*VLSIWM
Trigger: CATCCAGATTGATAAAACCAAGCCTTTGTGGCACAA...TATCCGGACTTCAGTACTAGTGCTAATAACATCCAGATTGATAAAACCAAGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000558775.5
ENST00000559883.5
ENST00000559963.5
CDS-3UTR CAA 90 bp GTCCACATAAGAAATAGTTGTGCCACAAAGGCTTGGTTTTATCAATCTGGATGTTTGTGCCACAAAGGCTaGGTTTTATCAATCTGGATG +
Preference number: 5 (lower is better)
Translates to: VHIRNSCATKAWFYQSGCLCHKG*VLSIWM
Trigger: CATCCAGATTGATAAAACCAAGCCTTTGTGGCACAA...ACATCCAGATTGATAAAACCAAGCCTTTGTGGCACAACTATTTCTTATGTGGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000558775.5
ENST00000558956.5
ENST00000559208.5
ENST00000559423.5
ENST00000559883.5
ENST00000559963.5
ENST00000560119.5
CDS-3UTR CAA 90 bp ATCTTATTCTTCACTACATACCAAAGCAAAGCCTTCACTCTCACTGAGCCTCCTCAGACAACTACAACTTaGAGGAAGAAGAATACTAAG +
Preference number: 5 (lower is better)
Translates to: ILFFTTYQSKAFTLTEPPQTTTT*RKKNTK
Trigger: CTTAGTATTCTTCTTCCTCAAAGTTGTAGTTGTCTG...AGGAGGCTCAGTGAGAGTGAAGGCTTTGCTTTGGTATGTAGTGAAGAATAAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CAA 90 bp GGACAATATTTCATAAGCAATGTATGGTGGCACACCCAAATTACAGTGGCAGGATTCAACAAAATCATATaGGGTACCAACAGCTGTGTT +
Preference number: 5 (lower is better)
Translates to: GQYFISNVWWHTQITVAGFNKII*GTNSCV
Trigger: AACACAGCTGTTGGTACCCAATATGATTTTGTTGAA...TCCTGCCACTGTAATTTGGGTGTGCCACCATACATTGCTTATGAAATATTGTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CAA 90 bp ATCAATCTGGATGTTATTAGCACTAGTACTGAAGTCCCTTTTATGTTCAAACTGATTTGTATTGGCCAGTaGGAGAGCGTACGTTTTCAC +
Preference number: 5 (lower is better)
Translates to: INLDVISTSTEVPFMFKLICIGQ*ESVRFH
Trigger: GTGAAAACGTACGCTCTCCAACTGGCCAATACAAAT...CAGTTTGAACATAAAAGGGACTTCAGTACTAGTGCTAATAACATCCAGATTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560119.5
CDS-3UTR CAA 90 bp ATGCCCTGTAGAAATGTTGGACAAGTAGTATCAGATATTCCACCACTCAGTAATCAGTACTTTGTCCCATaGCAAGCTTTTGTATTTAGC +
Preference number: 5 (lower is better)
Translates to: MPCRNVGQVVSDIPPLSNQYFVP*QAFVFS
Trigger: GCTAAATACAAAAGCTTGCAATGGGACAAAGTACTG...ATTACTGAGTGGTGGAATATCTGATACTACTTGTCCAACATTTCTACAGGGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CAA 90 bp ATTATTTTCTTCCTCTTACAGTCGCACTATAGTAGTACTGGTCCAGAGTTTAATGAAGATGAGCACATCTaGAGTGTTTGGACTCAGGAT +
Preference number: 5 (lower is better)
Translates to: IIFFLLQSHYSSTGPEFNEDEHI*SVWTQD
Trigger: ATCCTGAGTCCAAACACTCAAGATGTGCTCATCTTC...ATTAAACTCTGGACCAGTACTACTATAGTGCGACTGTAAGAGGAAGAAAATAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558399.5
ENST00000559580.5
CDS-3UTR CAA 90 bp GCAGGAGAGGATACATTCTTGTTACTTAATCATCTACATGCACATGTAAGAAAAGAAATAAAACTAGCTTaGCGCAGGCCTCCCTTAAAC +
Preference number: 5 (lower is better)
Translates to: AGEDTFLLLNHLHAHVRKEIKLA*RRPPLN
Trigger: GTTTAAGGGAGGCCTGCGCAAAGCTAGTTTTATTTC...TTTTCTTACATGTGCATGTAGATGATTAAGTAACAAGAATGTATCCTCTCCTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CAA 90 bp GCAGGAGAGGATACATTCTTGTTACTTAATCATCTACATGCACATGTAAGAAAATACTTATGGGCATTCTaGTTAAGTCTGAAGGGCTTC +
Preference number: 5 (lower is better)
Translates to: AGEDTFLLLNHLHAHVRKYLWAF*LSLKGF
Trigger: GAAGCCCTTCAGACTTAACAAGAATGCCCATAAGTA...TTTTCTTACATGTGCATGTAGATGATTAAGTAACAAGAATGTATCCTCTCCTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS-3UTR CAA 90 bp GCAGGAGAGGATACATTCTTGTTACTTAATCATCTACATGCACATGTAAGAAAACATGCCATAAAACCATaGCTATCTCAATTACCTGAG +
Preference number: 5 (lower is better)
Translates to: AGEDTFLLLNHLHAHVRKHAIKP*LSQLPE
Trigger: CTCAGGTAATTGAGATAGCAATGGTTTTATGGCATG...TTTTCTTACATGTGCATGTAGATGATTAAGTAACAAGAATGTATCCTCTCCTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327171.7
ENST00000560031.6
CDS TCA 72 bp TGCTCGATGCGAGCGCAGTTTCCGACGCCCTTCGGCTaGGACCTGCAGCACCGGACGATGTCCCAGTTGCCA +
Preference number: 6 (lower is better)
Translates to: CSMRAQFPTPFG*DLQHRTMSQLP
Trigger: TGGCAACTGGGACATCGTCCGGTGCTGCAGGTCTCAGCCGAAGGGCGTCGGAAACTGCGCTCGCATCGAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327171.7
ENST00000558775.5
ENST00000559040.1
ENST00000559883.5
ENST00000559963.5
ENST00000560654.5
ENST00000561074.5
CDS GCA 72 bp GGAGGAGACTGCTCCTTTACCCAGGAGGCTGGAAACTaGTCGATGCGAGCGCAGTTTCCGACGCCCTTCGGC +
Preference number: 6 (lower is better)
Translates to: GGDCSFTQEAGN*SMRAQFPTPFG
Trigger: GCCGAAGGGCGTCGGAAACTGCGCTCGCATCGAGCAGTTTCCAGCCTCCTGGGTAAAGGAGCAGTCTCCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327171.7
ENST00000558775.5
ENST00000559040.1
ENST00000559883.5
ENST00000559963.5
ENST00000560654.5
ENST00000561074.5
CDS GCA 72 bp ACTGCTCCTTTACCCAGGAGGCTGGAAACTGCTCGATaGGAGCGCAGTTTCCGACGCCCTTCGGCTGAGACC +
Preference number: 6 (lower is better)
Translates to: TAPLPRRLETAR*ERSFRRPSAET
Trigger: GGTCTCAGCCGAAGGGCGTCGGAAACTGCGCTCGCATCGAGCAGTTTCCAGCCTCCTGGGTAAAGGAGCAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327171.7
ENST00000558775.5
ENST00000559040.1
ENST00000559883.5
ENST00000559963.5
ENST00000560654.5
ENST00000561074.5
CDS TCA 72 bp AATGGTGTGGCCTATCTGCAGGTCATAGCCTCTGCCTaGGGGAGCCCTGCAGCCCGGAAGACGGATACAAGG +
Preference number: 6 (lower is better)
Translates to: NGVAYLQVIASA*GSPAARKTDTR
Trigger: CCTTGTATCCGTCTTCCGGGCTGCAGGGCTCCCTCAGGCAGAGGCTATGACCTGCAGATAGGCCACACCATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558956.5
ENST00000559208.5
ENST00000559423.5
CDS CCA 72 bp AAGCAAGGGAGGAGACTGCTCCTTTACCCAGGAGGCTaGAAACTGCTCGATGCGAGCGCAGTTTCCGACGCC +
Preference number: 6 (lower is better)
Translates to: KQGRRLLLYPGG*KLLDASAVSDA
Trigger: GGCGTCGGAAACTGCGCTCGCATCGAGCAGTTTCCAGCCTCCTGGGTAAAGGAGCAGTCTCCTCCCTTGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327171.7
ENST00000558775.5
ENST00000559040.1
ENST00000559883.5
ENST00000559963.5
ENST00000560654.5
ENST00000561074.5
CDS CCA 72 bp GACAGAGCGAGACTCCATCTAGGATGTTCTGCCACCTaGACCCGACGCGTAGCAGGGCTCTCTGTAGCCATA +
Preference number: 6 (lower is better)
Translates to: DRARLHLGCSAT*TRRVAGLSVAI
Trigger: TATGGCTACAGAGAGCCCTGCTACGCGTCGGGTCCAGGTGGCAGAACATCCTAGATGGAGTCTCGCTCTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544523.5
CDS CCA 72 bp AGTGAAACCCCGTCTCTACTAGGATGTTCTGCCACCTaGACCCGACGCGTAGCAGGGCTCTCTGTAGCCATA +
Preference number: 6 (lower is better)
Translates to: SETPSLLGCSAT*TRRVAGLSVAI
Trigger: TATGGCTACAGAGAGCCCTGCTACGCGTCGGGTCCAGGTGGCAGAACATCCTAGTAGAGACGGGGTTTCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559095.1
CDS TCA 72 bp CTGGTATTTCCAAAGCACCGACAGATGTCCACCAGCTaGTCCAGCTCGGGGCAGCTGCACTCATACATGTCC +
Preference number: 6 (lower is better)
Translates to: LVFPKHRQMSTS*SSSGQLHSYMS
Trigger: GGACATGTATGAGTGCAGCTGCCCCGAGCTGGATCAGCTGGTGGACATCTGTCGGTGCTTTGGAAATACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558399.5
CDS GCA 72 bp CTATCTGCAGGTCATAGCCTCTGCCTGAGGGAGCCCTaGAGCCCGGAAGACGGATACAAGGGATTTGTATTG +
Preference number: 6 (lower is better)
Translates to: LSAGHSLCLREP*SPEDGYKGFVL
Trigger: CAATACAAATCCCTTGTATCCGTCTTCCGGGCTGCAGGGCTCCCTCAGGCAGAGGCTATGACCTGCAGATAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000558956.5
ENST00000559208.5
ENST00000559423.5
CDS CCA 72 bp ATTGGGGAACCCTGCTCTACAGGACCAGTCCAAGAATaGTGTGGCCTATCTGCAGGTCATAGCCTCTGCCTG +
Preference number: 6 (lower is better)
Translates to: IGEPCSTGPVQE*CGLSAGHSLCL
Trigger: CAGGCAGAGGCTATGACCTGCAGATAGGCCACACCATTCTTGGACTGGTCCTGTAGAGCAGGGTTCCCCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558956.5
ENST00000559208.5
ENST00000559423.5
CDS CAA 72 bp GGGAGCCCTGCAGCCCGGAAGACGGATACAAGGGATTaGTATTGGCCAGTTGGAGAGCGTACGTTTTCACAG +
Preference number: 6 (lower is better)
Translates to: GSPAARKTDTRD*YWPVGERTFSQ
Trigger: CTGTGAAAACGTACGCTCTCCAACTGGCCAATACAAATCCCTTGTATCCGTCTTCCGGGCTGCAGGGCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558956.5
ENST00000559208.5
ENST00000559423.5
CDS GCA 72 bp CTGGAGCACTCGCGCAGCCTCGCTGTACACATGCTTTaGCCGCTGATAGAGTTTGAAGATGAGCACATCTTG +
Preference number: 6 (lower is better)
Translates to: LEHSRSLAVHML*PLIEFEDEHIL
Trigger: CAAGATGTGCTCATCTTCAAACTCTATCAGCGGGCAAAGCATGTGTACAGCGAGGCTGCGCGAGTGCTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327171.7
ENST00000396509.6
ENST00000544523.5
ENST00000558399.5
ENST00000559454.5
ENST00000559580.5
ENST00000560031.6
CDS GCA 72 bp CAAAAACTAACAGATGCTGATGAGGCTAGGATGTTCTaGCACCTGGACCCGACGCGTAGCAGGGCTCTCTGT +
Preference number: 6 (lower is better)
Translates to: QKLTDADEARMF*HLDPTRSRALC
Trigger: ACAGAGAGCCCTGCTACGCGTCGGGTCCAGGTGGCAGAACATCCTAGCCTCATCAGCATCTGTTAGTTTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558145.5
CDS CCA 72 bp TCCTTTAGCTTCAGTAACCTAGGATGTTCTGCCACCTaGACCCGACGCGTAGCAGGGCTCTCTGTAGCCATA +
Preference number: 6 (lower is better)
Translates to: SFSFSNLGCSAT*TRRVAGLSVAI
Trigger: TATGGCTACAGAGAGCCCTGCTACGCGTCGGGTCCAGGTGGCAGAACATCCTAGGTTACTGAAGCTAAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559208.5
ENST00000560031.6
CDS TCA 72 bp CGAGGTCAAGAGATCGAGACCATCTGGCTAACACAGTaGAACCCCGTCTCTACTAGGATGTTCTGCCACCTG +
Preference number: 6 (lower is better)
Translates to: RGQEIETIWLTQ*NPVSTRMFCHL
Trigger: CAGGTGGCAGAACATCCTAGTAGAGACGGGGTTTCACTGTGTTAGCCAGATGGTCTCGATCTCTTGACCTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559095.1
CDS GCA 72 bp CTGGAGCACTCGCGCAGCCTCGCTGTACACATGCTTTaGCCGCTGATAGAGTTTGAAGATGAGCACATTTTC +
Preference number: 6 (lower is better)
Translates to: LEHSRSLAVHML*PLIEFEDEHIF
Trigger: GAAAATGTGCTCATCTTCAAACTCTATCAGCGGGCAAAGCATGTGTACAGCGAGGCTGCGCGAGTGCTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561014.1
CDS CAA 72 bp CCCTGCAGCCCGGAAGACGGATACAAGGGATTTGTATaGGCCAGTTGGAGAGCGTACGTTTTCACAGGTTCT +
Preference number: 6 (lower is better)
Translates to: PCSPEDGYKGFV*ASWRAYVFTGS
Trigger: AGAACCTGTGAAAACGTACGCTCTCCAACTGGCCAATACAAATCCCTTGTATCCGTCTTCCGGGCTGCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558956.5
ENST00000559208.5
ENST00000559423.5
CDS CAA 90 bp CTGAGGGAGCCCTGCAGCCCGGAAGACGGATACAAGGGATTTGTATaGGCCAGTTGGAGAGCGTACGTTTTCACAGGTTCTACAGCTATT +
Preference number: 6 (lower is better)
Translates to: LREPCSPEDGYKGFV*ASWRAYVFTGSTAI
Trigger: AATAGCTGTAGAACCTGTGAAAACGTACGCTCTCCAACTGGCCAATACAAATCCCTTGTATCCGTCTTCCGGGCTGCAGGGCTCCCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558956.5
ENST00000559208.5
ENST00000559423.5
CDS GCA 72 bp CGTTCCGAAGCTCCAGGTTTGGTAGCAAACAAACTTTaGTTCTCCGGTGCTAAGCTTCCATCACTCCTCTGG +
Preference number: 6 (lower is better)
Translates to: RSEAPGLVANKL*FSGAKLPSLLW
Trigger: CCAGAGGAGTGATGGAAGCTTAGCACCGGAGAAGCAAAGTTTGTTTGCTACCAAACCTGGAGCTTCGGAACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560528.1
CDS CCA 72 bp CCTGCAGCCCGGAAGACGGATACAAGGGATTTGTATTaGCCAGTTGGAGAGCGTACGTTTTCACAGGTTCTA +
Preference number: 6 (lower is better)
Translates to: PAARKTDTRDLY*PVGERTFSQVL
Trigger: TAGAACCTGTGAAAACGTACGCTCTCCAACTGGCCAATACAAATCCCTTGTATCCGTCTTCCGGGCTGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558956.5
ENST00000559208.5
ENST00000559423.5
CDS CAA 90 bp TTAGCCTGCACCTTCGCAGCCAGCCGACACTCCATCACCCTGATATaGAAATGGGAAGTTGCTGCCTTATTCATCTCCACACAACTGTTG +
Preference number: 6 (lower is better)
Translates to: LACTFAASRHSITLI*KWEVAALFISTQLL
Trigger: CAACAGTTGTGTGGAGATGAATAAGGCAGCAACTTCCCATTTCAATATCAGGGTGATGGAGTGTCGGCTGGCTGCGAAGGTGCAGGCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560138.5
CDS GCA 72 bp TCCAAAGCACCTCCAGGTTTGGTAGCAAACAAACTTTaGTTCTCCGGTGCTAAGCTTCCATCACTCCTCTGG +
Preference number: 6 (lower is better)
Translates to: SKAPPGLVANKL*FSGAKLPSLLW
Trigger: CCAGAGGAGTGATGGAAGCTTAGCACCGGAGAAGCAAAGTTTGTTTGCTACCAAACCTGGAGGTGCTTTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559580.5
CDS CAA 72 bp ACCTTCGCAGCCAGCCGACACTCCATCACCCTGATATaGAAATGGGAAGTTGCTGCCTTATTCATCTCCACA +
Preference number: 6 (lower is better)
Translates to: TFAASRHSITLI*KWEVAALFIST
Trigger: TGTGGAGATGAATAAGGCAGCAACTTCCCATTTCAATATCAGGGTGATGGAGTGTCGGCTGGCTGCGAAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560138.5
CDS CAA 72 bp GAAGATGAGCACATCTTGAGTGTTTGGACTCAGGATTaGGGTTCGGAGTTCCTCCAGGCTAATTCCCAGACA +
Preference number: 6 (lower is better)
Translates to: EDEHILSVWTQD*GSEFLQANSQT
Trigger: TGTCTGGGAATTAGCCTGGAGGAACTCCGAACCCAAATCCTGAGTCCAAACACTCAAGATGTGCTCATCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327171.7
ENST00000396509.6
ENST00000544523.5
ENST00000558399.5
ENST00000559454.5
ENST00000559580.5
ENST00000560031.6
CDS CAA 72 bp CCCGGAAGACGGATACAAGGGATTTGTATTGGCCAGTaGGAGAGCGTACGTTTTCACAGGTTCTACAGCTAT +
Preference number: 6 (lower is better)
Translates to: PGRRIQGICIGQ*ESVRFHRFYSY
Trigger: ATAGCTGTAGAACCTGTGAAAACGTACGCTCTCCAACTGGCCAATACAAATCCCTTGTATCCGTCTTCCGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558956.5
ENST00000559208.5
ENST00000559423.5
CDS CAA 90 bp ATAGAGTTTGAAGATGAGCACATCTTGAGTGTTTGGACTCAGGATTaGGGTTCGGAGTTCCTCCAGGCTAATTCCCAGACACCTGCAGAT +
Preference number: 6 (lower is better)
Translates to: IEFEDEHILSVWTQD*GSEFLQANSQTPAD
Trigger: ATCTGCAGGTGTCTGGGAATTAGCCTGGAGGAACTCCGAACCCAAATCCTGAGTCCAAACACTCAAGATGTGCTCATCTTCAAACTCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327171.7
ENST00000396509.6
ENST00000544523.5
ENST00000558399.5
ENST00000559454.5
ENST00000560031.6
CDS CAA 90 bp ATTTATGAAAATTCCCAGGCCATCTTGAGTGTTTGGACTCAGGATTaGGGTTCGGAGTTCCTCCAGGCTAATTCCCAGACACCTGCAGAT +
Preference number: 6 (lower is better)
Translates to: IYENSQAILSVWTQD*GSEFLQANSQTPAD
Trigger: ATCTGCAGGTGTCTGGGAATTAGCCTGGAGGAACTCCGAACCCAAATCCTGAGTCCAAACACTCAAGATGGCCTGGGAATTTTCATAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561014.1
CDS CCA 72 bp CCGGAAGACGGATACAAGGGATTTGTATTGGCCAGTTaGAGAGCGTACGTTTTCACAGGTTCTACAGCTATT +
Preference number: 6 (lower is better)
Translates to: PEDGYKGFVLAS*RAYVFTGSTAI
Trigger: AATAGCTGTAGAACCTGTGAAAACGTACGCTCTCCAACTGGCCAATACAAATCCCTTGTATCCGTCTTCCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558956.5
ENST00000559208.5
ENST00000559423.5
CDS GCA 72 bp CACAAACACTGCTCCACTTGGGAGTTTTACATCGGTTaGCCTCAGAGGACTAAATTCTATCAACTTGGCCTT +
Preference number: 6 (lower is better)
Translates to: HKHCSTWEFYIG*PQRTKFYQLGL
Trigger: AAGGCCAAGTTGATAGAATTTAGTCCTCTGAGGGCAACCGATGTAAAACTCCCAAGTGGAGCAGTGTTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560138.5
CDS CCA 72 bp AAAATTTATGAAAATTCCCAGGCCATCTTGAGTGTTTaGACTCAGGATTTGGGTTCGGAGTTCCTCCAGGCT +
Preference number: 6 (lower is better)
Translates to: KIYENSQAILSV*TQDLGSEFLQA
Trigger: AGCCTGGAGGAACTCCGAACCCAAATCCTGAGTCCAAACACTCAAGATGGCCTGGGAATTTTCATAAATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561014.1
CDS CAA 72 bp CTCCAACTGACCCTTTTTATTTCGGATACAAGGGATTaGTATTGGCCAGTTGGAGAGCGTACGTTTTCACAG +
Preference number: 6 (lower is better)
Translates to: LQLTLFISDTRD*YWPVGERTFSQ
Trigger: CTGTGAAAACGTACGCTCTCCAACTGGCCAATACAAATCCCTTGTATCCGAAATAAAAAGGGTCAGTTGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560119.5
CDS CCA 72 bp CTGACCCTTTTTATTTCGGATACAAGGGATTTGTATTaGCCAGTTGGAGAGCGTACGTTTTCACAGGTTCTA +
Preference number: 6 (lower is better)
Translates to: LTLFISDTRDLY*PVGERTFSQVL
Trigger: TAGAACCTGTGAAAACGTACGCTCTCCAACTGGCCAATACAAATCCCTTGTATCCGAAATAAAAAGGGTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560119.5
CDS CAA 72 bp ACTGACCCTTTTTATTTCGGATACAAGGGATTTGTATaGGCCAGTTGGAGAGCGTACGTTTTCACAGGTTCT +
Preference number: 6 (lower is better)
Translates to: TDPFYFGYKGFV*ASWRAYVFTGS
Trigger: AGAACCTGTGAAAACGTACGCTCTCCAACTGGCCAATACAAATCCCTTGTATCCGAAATAAAAAGGGTCAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560119.5
CDS CCA 72 bp GATAAATTCGGATACAAGGGATTTGTATTGGCCAGTTaGAGAGCGTACGTTTTCACAGGTTCTACAGCTATT +
Preference number: 6 (lower is better)
Translates to: DKFGYKGFVLAS*RAYVFTGSTAI
Trigger: AATAGCTGTAGAACCTGTGAAAACGTACGCTCTCCAACTGGCCAATACAAATCCCTTGTATCCGAATTTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559040.1
CDS CAA 90 bp AGCAACCTAAAGGAAATTGATAAATTCGGATACAAGGGATTTGTATaGGCCAGTTGGAGAGCGTACGTTTTCACAGGTTCTACAGCTATT +
Preference number: 6 (lower is better)
Translates to: SNLKEIDKFGYKGFV*ASWRAYVFTGSTAI
Trigger: AATAGCTGTAGAACCTGTGAAAACGTACGCTCTCCAACTGGCCAATACAAATCCCTTGTATCCGAATTTATCAATTTCCTTTAGGTTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559040.1
CDS CCA 72 bp TTTTATTTCGGATACAAGGGATTTGTATTGGCCAGTTaGAGAGCGTACGTTTTCACAGGTTCTACAGCTATT +
Preference number: 6 (lower is better)
Translates to: FYFGYKGFVLAS*RAYVFTGSTAI
Trigger: AATAGCTGTAGAACCTGTGAAAACGTACGCTCTCCAACTGGCCAATACAAATCCCTTGTATCCGAAATAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560119.5
CDS CCA 72 bp AGGAAATTGATAAATTCGGATACAAGGGATTTGTATTaGCCAGTTGGAGAGCGTACGTTTTCACAGGTTCTA +
Preference number: 6 (lower is better)
Translates to: RKLINSDTRDLY*PVGERTFSQVL
Trigger: TAGAACCTGTGAAAACGTACGCTCTCCAACTGGCCAATACAAATCCCTTGTATCCGAATTTATCAATTTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559040.1
CDS CAA 72 bp TTTTTATTTCGGATACAAGGGATTTGTATTGGCCAGTaGGAGAGCGTACGTTTTCACAGGTTCTACAGCTAT +
Preference number: 6 (lower is better)
Translates to: FLFRIQGICIGQ*ESVRFHRFYSY
Trigger: ATAGCTGTAGAACCTGTGAAAACGTACGCTCTCCAACTGGCCAATACAAATCCCTTGTATCCGAAATAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560119.5
CDS CAA 72 bp AAGGAAATTGATAAATTCGGATACAAGGGATTTGTATaGGCCAGTTGGAGAGCGTACGTTTTCACAGGTTCT +
Preference number: 6 (lower is better)
Translates to: KEIDKFGYKGFV*ASWRAYVFTGS
Trigger: AGAACCTGTGAAAACGTACGCTCTCCAACTGGCCAATACAAATCCCTTGTATCCGAATTTATCAATTTCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559040.1