RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GAL3ST4 (Homo sapiens)

Ensembl gene IDs: ENSG00000197093

Ensembl transcript IDs: ENST00000360039.9, ENST00000411994.1, ENST00000413800.5, ENST00000423751.2, ENST00000460995.2, ENST00000482469.5, ENST00000495882.1, ENST00000498000.5

Found 343 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCTCGGCGAGCCCGGAGCTCGGCCACAGCTGTCTGCAGCCGGCCCTaGCCGTATTTCTCTATCCGTGCCCAGAGACTGCGGTTGAAGTGG +
Preference number: 1 (lower is better)
Translates to: SRRARSSATAVCSRP*PYFSIRAQRLRLKW
Trigger: CCACTTCAACCGCAGTCTCTGGGCACGGATAGAGAAATACGGCCAGGGCCGGCTGCAGACAGCTGTGGCCGAGCTCCGGGCTCGCCGAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
3UTR GCA 90 bp AGAGCCCAGTCCAGGTTGTTCCAGGCTCGGGCCCGTGCAGTCAGCTaGCGGTCCTCCGCAGTCAGTCCACTGTTGCTGACAGTGCTGAGG +
Preference number: 1 (lower is better)
Translates to: RAQSRLFQARARAVS*RSSAVSPLLLTVLR
Trigger: CCTCAGCACTGTCAGCAACAGTGGACTGACTGCGGAGGACCGGCAGCTGACTGCACGGGCCCGAGCCTGGAACAACCTGGACTGGGCTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
3UTR GCA 90 bp GTGGACATAGAGAGCCCAGTCCAGGTTGTTCCAGGCTCGGGCCCGTaGAGTCAGCTGCCGGTCCTCCGCAGTCAGTCCACTGTTGCTGAC +
Preference number: 1 (lower is better)
Translates to: VDIESPVQVVPGSGP*SQLPVLRSQSTVAD
Trigger: GTCAGCAACAGTGGACTGACTGCGGAGGACCGGCAGCTGACTGCACGGGCCCGAGCCTGGAACAACCTGGACTGGGCTCTCTATGTCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
3UTR TCA 90 bp GCCGGCCCTGGCCGTATTTCTCTATCCGTGCCCAGAGACTGCGGTTaGAGTGGACATAGAGAGCCCAGTCCAGGTTGTTCCAGGCTCGGG +
Preference number: 1 (lower is better)
Translates to: AGPGRISLSVPRDCG*SGHREPSPGCSRLG
Trigger: CCCGAGCCTGGAACAACCTGGACTGGGCTCTCTATGTCCACTTCAACCGCAGTCTCTGGGCACGGATAGAGAAATACGGCCAGGGCCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
3UTR GCA 90 bp GGCCACAGCTGTCTGCAGCCGGCCCTGGCCGTATTTCTCTATCCGTaGCCAGAGACTGCGGTTGAAGTGGACATAGAGAGCCCAGTCCAG +
Preference number: 1 (lower is better)
Translates to: GHSCLQPALAVFLYP*PETAVEVDIESPVQ
Trigger: CTGGACTGGGCTCTCTATGTCCACTTCAACCGCAGTCTCTGGGCACGGATAGAGAAATACGGCCAGGGCCGGCTGCAGACAGCTGTGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
3UTR GCA 90 bp CGGTCCTCCGCAGTCAGTCCACTGTTGCTGACAGTGCTGAGGCCCTaGTTATGTCCAGCCTGGGCATTGTGCATGAAGCCCACCACGTCA +
Preference number: 1 (lower is better)
Translates to: RSSAVSPLLLTVLRP*LCPAWALCMKPTTS
Trigger: TGACGTGGTGGGCTTCATGCACAATGCCCAGGCTGGACATAAGCAGGGCCTCAGCACTGTCAGCAACAGTGGACTGACTGCGGAGGACCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
3UTR CAA 90 bp CGGGCCCGTGCAGTCAGCTGCCGGTCCTCCGCAGTCAGTCCACTGTaGCTGACAGTGCTGAGGCCCTGCTTATGTCCAGCCTGGGCATTG +
Preference number: 2 (lower is better)
Translates to: RARAVSCRSSAVSPL*LTVLRPCLCPAWAL
Trigger: CAATGCCCAGGCTGGACATAAGCAGGGCCTCAGCACTGTCAGCAACAGTGGACTGACTGCGGAGGACCGGCAGCTGACTGCACGGGCCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
3UTR-3UTR GCA 90 bp GCCACAGCTGTCTGCAGCCGGCCCTGGCCGTATTTCTCTATCCGTGCCCAGAGAGCCCGTGCAGTCAGCTaGCGGTCCTCCGCAGTCAGT +
Preference number: 2 (lower is better)
Translates to: ATAVCSRPWPYFSIRAQRARAVS*RSSAVS
Trigger: ACTGACTGCGGAGGACCGGCAGCTGACTGCACGGGC...TCTCTGGGCACGGATAGAGAAATACGGCCAGGGCCGGCTGCAGACAGCTGTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
3UTR-3UTR TCA 90 bp CCTCACCCCCTACCAGACAATGTTTCGCTAGGGCCTCTCGGCGAGCCCGGAGCTCCCAGAGACTGCGGTTaGAGTGGACATAGAGAGCCC +
Preference number: 2 (lower is better)
Translates to: PHPLPDNVSLGPLGEPGAPRDCG*SGHREP
Trigger: GGGCTCTCTATGTCCACTTCAACCGCAGTCTCTGGG...AGCTCCGGGCTCGCCGAGAGGCCCTAGCGAAACATTGTCTGGTAGGGGGTGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
3UTR-3UTR TCA 90 bp ACCAGACAATGTTTCGCTAGGGCCTCTCGGCGAGCCCGGAGCTCGGCCACAGCTCCCAGAGACTGCGGTTaGAGTGGACATAGAGAGCCC +
Preference number: 2 (lower is better)
Translates to: TRQCFARASRRARSSATAPRDCG*SGHREP
Trigger: GGGCTCTCTATGTCCACTTCAACCGCAGTCTCTGGG...AGCTGTGGCCGAGCTCCGGGCTCGCCGAGAGGCCCTAGCGAAACATTGTCTGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
3UTR-3UTR GCA 90 bp GCCACAGCTGTCTGCAGCCGGCCCTGGCCGTATTTCTCTATCCGTGCCCAGAGAACAGTGCTGAGGCCCTaGTTATGTCCAGCCTGGGCA +
Preference number: 2 (lower is better)
Translates to: ATAVCSRPWPYFSIRAQRTVLRP*LCPAWA
Trigger: TGCCCAGGCTGGACATAAGCAGGGCCTCAGCACTGT...TCTCTGGGCACGGATAGAGAAATACGGCCAGGGCCGGCTGCAGACAGCTGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
3UTR-3UTR GCA 90 bp AGAGAGCCCAGTCCAGGTTGTTCCAGGCTCGGGCCCGTGCAGTCAGCTGCCGGTGAAATGGCATCTTGCTaGCCCCCACTCATCACATGT +
Preference number: 2 (lower is better)
Translates to: REPSPGCSRLGPVQSAAGEMASC*PPLITC
Trigger: ACATGTGATGAGTGGGGGGCAGCAAGATGCCATTTC...ACCGGCAGCTGACTGCACGGGCCCGAGCCTGGAACAACCTGGACTGGGCTCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
3UTR-3UTR GCA 90 bp TGCCGGTCCTCCGCAGTCAGTCCACTGTTGCTGACAGTGCTGAGGCCCTGCTTACCAGCCTGGGCATTGTaGATGAAGCCCACCACGTCA +
Preference number: 2 (lower is better)
Translates to: CRSSAVSPLLLTVLRPCLPAWAL*MKPTTS
Trigger: TGACGTGGTGGGCTTCATGCACAATGCCCAGGCTGG...TAAGCAGGGCCTCAGCACTGTCAGCAACAGTGGACTGACTGCGGAGGACCGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
3UTR-3UTR CCA 90 bp GGCCACAGCTGTCTGCAGCCGGCCCTGGCCGTATTTCTCTATCCGTGCCCAGAGTGCTTATGTCCAGCCTaGGCATTGTGCATGAAGCCC +
Preference number: 2 (lower is better)
Translates to: GHSCLQPALAVFLYPCPECLCPA*ALCMKP
Trigger: GGGCTTCATGCACAATGCCCAGGCTGGACATAAGCA...CTCTGGGCACGGATAGAGAAATACGGCCAGGGCCGGCTGCAGACAGCTGTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
3UTR-3UTR CCA 90 bp GTTGTTCCAGGCTCGGGCCCGTGCAGTCAGCTGCCGGTCCTCCGCAGTCAGTCCTGTGCCCTTCAAACATaGCTGCTCTTCCACCTAAAT +
Preference number: 2 (lower is better)
Translates to: VVPGSGPCSQLPVLRSQSCALQT*LLFHLN
Trigger: ATTTAGGTGGAAGAGCAGCCATGTTTGAAGGGCACA...GGACTGACTGCGGAGGACCGGCAGCTGACTGCACGGGCCCGAGCCTGGAACAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
3UTR-3UTR GCA 90 bp GGGCTTGCATCGGGACAAAGACTCATCCCTTCTGGGAGATGCAGAAATGGCATCGGAGGAGGGAAGCACTaGTGGGAGCCCAGCGAAGAG +
Preference number: 2 (lower is better)
Translates to: GLASGQRLIPSGRCRNGIGGGKH*WEPSEE
Trigger: CTCTTCGCTGGGCTCCCAGCAGTGCTTCCCTCCTCC...GATGCCATTTCTGCATCTCCCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000423751.2
3UTR-3UTR CCA 90 bp GACAATGTTTCGCTAGGGCCTCTCGGCGAGCCCGGAGCTCGGCCACAGCTGTCTAAGACTCATCCCTTCTaGGAGATGCAGAAATGGCAT +
Preference number: 2 (lower is better)
Translates to: DNVSLGPLGEPGARPQLSKTHPF*EMQKWH
Trigger: ATGCCATTTCTGCATCTCCCAGAAGGGATGAGTCTT...AGACAGCTGTGGCCGAGCTCCGGGCTCGCCGAGAGGCCCTAGCGAAACATTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
3UTR-3UTR GCA 90 bp CCCAAACTGGAAGGGGCGGAACCGGCGATCAGTGATGTATTTGGGGTCAGAAGCAGCGAAGAGGGGGCTTaGATCGGGACAAAGACTCAT +
Preference number: 2 (lower is better)
Translates to: PKLEGAEPAISDVFGVRSSEEGA*IGTKTH
Trigger: ATGAGTCTTTGTCCCGATGCAAGCCCCCTCTTCGCT...GCTTCTGACCCCAAATACATCACTGATCGCCGGTTCCGCCCCTTCCAGTTTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000423751.2
3UTR-3UTR CCA 90 bp GGCGCTCACATTCCTCTTGGTCTTGGGGGCTCAATCCACTCCGAAGTATATAGCGTCTGCAGCCGGCCCTaGCCGTATTTCTCTATCCGT +
Preference number: 2 (lower is better)
Translates to: GAHIPLGLGGSIHSEVYSVCSRP*PYFSIR
Trigger: ACGGATAGAGAAATACGGCCAGGGCCGGCTGCAGAC...GCTATATACTTCGGAGTGGATTGAGCCCCCAAGACCAAGAGGAATGTGAGCGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
3UTR-3UTR GCA 90 bp TGGCTCACTCCATCTTTTGCCCCTCTAGGGAGCTTCGGTGATGTGGATCTGCCTCCCACTCATCACATGTaGCCTTCAAACATGGCTGCT +
Preference number: 2 (lower is better)
Translates to: WLTPSFAPLGSFGDVDLPPTHHM*PSNMAA
Trigger: AGCAGCCATGTTTGAAGGGCACATGTGATGAGTGGG...AGGCAGATCCACATCACCGAAGCTCCCTAGAGGGGCAAAAGATGGAGTGAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360039.9
ENST00000413800.5
3UTR-3UTR GCA 90 bp AGAAATGGACGTATCATTCCAACTCACCACGCCCCAAACTTCCTGTGGCTCACTTCGGTGATGTGGATCTaGCTTGGGGCAGGAAAGGGG +
Preference number: 2 (lower is better)
Translates to: RNGRIIPTHHAPNFLWLTSVMWI*LGAGKG
Trigger: CCCCTTTCCTGCCCCAAGGCAGATCCACATCACCGA...AGTGAGCCACAGGAAGTTTGGGGCGTGGTGAGTTGGAATGATACGTCCATTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360039.9
ENST00000413800.5
3UTR-3UTR CCA 90 bp AGAAATGGACGTATCATTCCAACTCACCACGCCCCAAACTTCCTGTGGCTCACTGGAGCTTCGGTGATGTaGATCTGCCTTGGGGCAGGA +
Preference number: 2 (lower is better)
Translates to: RNGRIIPTHHAPNFLWLTGASVM*ICLGAG
Trigger: TCCTGCCCCAAGGCAGATCCACATCACCGAAGCTCC...AGTGAGCCACAGGAAGTTTGGGGCGTGGTGAGTTGGAATGATACGTCCATTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360039.9
ENST00000413800.5
3UTR-3UTR TCA 90 bp AGAAATGGACGTATCATTCCAACTCACCACGCCCCAAACTTCCTGTGGCTCACTGTGGATCACCTGAGGTaGGGAGTTCAAGACCAGCCT +
Preference number: 2 (lower is better)
Translates to: RNGRIIPTHHAPNFLWLTVDHLR*GVQDQP
Trigger: AGGCTGGTCTTGAACTCCTCACCTCAGGTGATCCAC...AGTGAGCCACAGGAAGTTTGGGGCGTGGTGAGTTGGAATGATACGTCCATTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360039.9
ENST00000413800.5
3UTR-3UTR CCA 90 bp ATTCCTCTTGGTCTTGGGGGCTCAATCCACTCCGAAGTATATAGCCCAAAACCTGTCTGCAGCCGGCCCTaGCCGTATTTCTCTATCCGT +
Preference number: 2 (lower is better)
Translates to: IPLGLGGSIHSEVYSPKPVCSRP*PYFSIR
Trigger: ACGGATAGAGAAATACGGCCAGGGCCGGCTGCAGAC...AGGTTTTGGGCTATATACTTCGGAGTGGATTGAGCCCCCAAGACCAAGAGGAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
3UTR-3UTR GCA 90 bp GGGCTTGCATCGGGACAAAGACTCATCCCTTCTGGGAGATGCAGAAATGGCATCATCCCTTCTGGGAGATaGAGAAATGGCATCTTGCTG +
Preference number: 2 (lower is better)
Translates to: GLASGQRLIPSGRCRNGIIPSGR*RNGILL
Trigger: CAGCAAGATGCCATTTCTGCATCTCCCAGAAGGGAT...GATGCCATTTCTGCATCTCCCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000423751.2
3UTR-3UTR CCA 90 bp CGAAGAGGGGGCTTGCATCGGGACAAAGACTCATCCCTTCTGGGAGATGCAGAATGTGCCCTTCAAACATaGCTGCTCTTCCACCTAAAT +
Preference number: 2 (lower is better)
Translates to: RRGGLHRDKDSSLLGDAECALQT*LLFHLN
Trigger: ATTTAGGTGGAAGAGCAGCCATGTTTGAAGGGCACA...TTCTGCATCTCCCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCCCCCTCTTCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000423751.2
3UTR-3UTR GCA 90 bp AGAAATGGACGTATCATTCCAACTCACCACGCCCCAAACTTCCTGTGGCTCACTCCCACTCATCACATGTaGCCTTCAAACATGGCTGCT +
Preference number: 2 (lower is better)
Translates to: RNGRIIPTHHAPNFLWLTPTHHM*PSNMAA
Trigger: AGCAGCCATGTTTGAAGGGCACATGTGATGAGTGGG...AGTGAGCCACAGGAAGTTTGGGGCGTGGTGAGTTGGAATGATACGTCCATTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360039.9
ENST00000413800.5
3UTR-3UTR GCA 90 bp AGAAATGGACGTATCATTCCAACTCACCACGCCCCAAACTTCCTGTGGCTCACTGAAATGGCATCTTGCTaGCCCCCACTCATCACATGT +
Preference number: 2 (lower is better)
Translates to: RNGRIIPTHHAPNFLWLTEMASC*PPLITC
Trigger: ACATGTGATGAGTGGGGGGCAGCAAGATGCCATTTC...AGTGAGCCACAGGAAGTTTGGGGCGTGGTGAGTTGGAATGATACGTCCATTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360039.9
ENST00000413800.5
3UTR-3UTR CCA 90 bp GCTAGGCGCTCACATTCCTCTTGGTCTTGGGGGCTCAATCCACTCCGAAGTATATGTGCCCTTCAAACATaGCTGCTCTTCCACCTAAAT +
Preference number: 2 (lower is better)
Translates to: ARRSHSSWSWGLNPLRSICALQT*LLFHLN
Trigger: ATTTAGGTGGAAGAGCAGCCATGTTTGAAGGGCACA...TATACTTCGGAGTGGATTGAGCCCCCAAGACCAAGAGGAATGTGAGCGCCTAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
3UTR-3UTR CCA 90 bp GGCTTGCATCGGGACAAAGACTCATCCCTTCTGGGAGATGCAGAAATGGCATCTTGTGCCCTTCAAACATaGCTGCTCTTCCACCTAAAT +
Preference number: 2 (lower is better)
Translates to: GLHRDKDSSLLGDAEMASCALQT*LLFHLN
Trigger: ATTTAGGTGGAAGAGCAGCCATGTTTGAAGGGCACA...AGATGCCATTTCTGCATCTCCCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000423751.2
3UTR GCA 72 bp GAGAGCCCAGTCCAGGTTGTTCCAGGCTCGGGCCCGTaGAGTCAGCTGCCGGTCCTCCGCAGTCAGTCCACT +
Preference number: 3 (lower is better)
Translates to: ESPVQVVPGSGP*SQLPVLRSQST
Trigger: AGTGGACTGACTGCGGAGGACCGGCAGCTGACTGCACGGGCCCGAGCCTGGAACAACCTGGACTGGGCTCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
3UTR GCA 72 bp TCCAGGTTGTTCCAGGCTCGGGCCCGTGCAGTCAGCTaGCGGTCCTCCGCAGTCAGTCCACTGTTGCTGACA +
Preference number: 3 (lower is better)
Translates to: SRLFQARARAVS*RSSAVSPLLLT
Trigger: TGTCAGCAACAGTGGACTGACTGCGGAGGACCGGCAGCTGACTGCACGGGCCCGAGCCTGGAACAACCTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
3UTR-3UTR CAA 90 bp GGCCACAGCTGTCTGCAGCCGGCCCTGGCCGTATTTCTCTATCCGTGCCCAGAGGCAGTCAGTCCACTGTaGCTGACAGTGCTGAGGCCC +
Preference number: 3 (lower is better)
Translates to: GHSCLQPALAVFLYPCPEAVSPL*LTVLRP
Trigger: GGGCCTCAGCACTGTCAGCAACAGTGGACTGACTGC...CTCTGGGCACGGATAGAGAAATACGGCCAGGGCCGGCTGCAGACAGCTGTGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
3UTR-3UTR CAA 90 bp CCCAAACTGGAAGGGGCGGAACCGGCGATCAGTGATGTATTTGGGGTCAGAAGCAGAGCCCAGTCCAGGTaGTTCCAGGCTCGGGCCCGT +
Preference number: 3 (lower is better)
Translates to: PKLEGAEPAISDVFGVRSRAQSR*FQARAR
Trigger: ACGGGCCCGAGCCTGGAACAACCTGGACTGGGCTCT...GCTTCTGACCCCAAATACATCACTGATCGCCGGTTCCGCCCCTTCCAGTTTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
3UTR GCA 72 bp TGTCTGCAGCCGGCCCTGGCCGTATTTCTCTATCCGTaGCCAGAGACTGCGGTTGAAGTGGACATAGAGAGC +
Preference number: 3 (lower is better)
Translates to: CLQPALAVFLYP*PETAVEVDIES
Trigger: GCTCTCTATGTCCACTTCAACCGCAGTCTCTGGGCACGGATAGAGAAATACGGCCAGGGCCGGCTGCAGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
3UTR-3UTR CAA 90 bp TGGCTCACTCCATCTTTTGCCCCTCTAGGGAGCTTCGGTGATGTGGATCTGCCTCAGCGAAGAGGGGGCTaGCATCGGGACAAAGACTCA +
Preference number: 3 (lower is better)
Translates to: WLTPSFAPLGSFGDVDLPQRRGG*HRDKDS
Trigger: TGAGTCTTTGTCCCGATGCAAGCCCCCTCTTCGCTG...AGGCAGATCCACATCACCGAAGCTCCCTAGAGGGGCAAAAGATGGAGTGAGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360039.9
ENST00000413800.5
3UTR-3UTR CAA 90 bp TTTCTCTATCCGTGCCCAGAGACTGCGGTTGAAGTGGACATAGAGAGCCCAGTCGCAGTCAGTCCACTGTaGCTGACAGTGCTGAGGCCC +
Preference number: 3 (lower is better)
Translates to: FLYPCPETAVEVDIESPVAVSPL*LTVLRP
Trigger: GGGCCTCAGCACTGTCAGCAACAGTGGACTGACTGC...GACTGGGCTCTCTATGTCCACTTCAACCGCAGTCTCTGGGCACGGATAGAGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
3UTR TCA 72 bp GGCCGTATTTCTCTATCCGTGCCCAGAGACTGCGGTTaGAGTGGACATAGAGAGCCCAGTCCAGGTTGTTCC +
Preference number: 3 (lower is better)
Translates to: GRISLSVPRDCG*SGHREPSPGCS
Trigger: GGAACAACCTGGACTGGGCTCTCTATGTCCACTTCAACCGCAGTCTCTGGGCACGGATAGAGAAATACGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
3UTR TCA 72 bp CAATCCACTCCGAAGTATATAGCCCAAAACCTTAGCTaGCCCAAACTGGAAGGGGCGGAACCGGCGATCAGT +
Preference number: 3 (lower is better)
Translates to: QSTPKYIAQNLS*PKLEGAEPAIS
Trigger: ACTGATCGCCGGTTCCGCCCCTTCCAGTTTGGGTCAGCTAAGGTTTTGGGCTATATACTTCGGAGTGGATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
3UTR-3UTR CAA 90 bp AGAAATGGACGTATCATTCCAACTCACCACGCCCCAAACTTCCTGTGGCTCACTTGTAATGGCAGCACTTaGGGAGGCAGAGTCATGTGG +
Preference number: 3 (lower is better)
Translates to: RNGRIIPTHHAPNFLWLTCNGST*GGRVMW
Trigger: CCACATGACTCTGCCTCCCAAAGTGCTGCCATTACA...AGTGAGCCACAGGAAGTTTGGGGCGTGGTGAGTTGGAATGATACGTCCATTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360039.9
ENST00000413800.5
3UTR CCA 72 bp AATGAACAGTCTAGTAGCAAATATTTCATAGAGAAATaGACGTATCATTCCAACTCACCACGCCCCAAACTT +
Preference number: 3 (lower is better)
Translates to: NEQSSSKYFIEK*TYHSNSPRPKL
Trigger: AAGTTTGGGGCGTGGTGAGTTGGAATGATACGTCCATTTCTCTATGAAATATTTGCTACTAGACTGTTCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360039.9
ENST00000413800.5
CDS-3UTR GCA 90 bp CGGGCCCGTGCAGTCAGCTGCCGGTCCTCCGCAGTCAGTCCACTGTTGCTGACACCAGGCTCGGGCCCGTaGAGTCAGCTGCCGGTCCTC +
Preference number: 4 (lower is better)
Translates to: RARAVSCRSSAVSPLLLTPGSGP*SQLPVL
Trigger: GAGGACCGGCAGCTGACTGCACGGGCCCGAGCCTGG...TGTCAGCAACAGTGGACTGACTGCGGAGGACCGGCAGCTGACTGCACGGGCCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
CDS-3UTR GCA 90 bp CGTGCAGTCAGCTGCCGGTCCTCCGCAGTCAGTCCACTGTTGCTGACAGTGCTGCCAGGCTCGGGCCCGTaGAGTCAGCTGCCGGTCCTC +
Preference number: 4 (lower is better)
Translates to: RAVSCRSSAVSPLLLTVLPGSGP*SQLPVL
Trigger: GAGGACCGGCAGCTGACTGCACGGGCCCGAGCCTGG...CAGCACTGTCAGCAACAGTGGACTGACTGCGGAGGACCGGCAGCTGACTGCACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
CDS-3UTR CCA 90 bp AGAGAGCCCAGTCCAGGTTGTTCCAGGCTCGGGCCCGTGCAGTCAGCTGCCGGTAGAGCCGCAGCGTCCTaGCAGGAGAGAGAGGGCCCA +
Preference number: 4 (lower is better)
Translates to: REPSPGCSRLGPVQSAAGRAAAS*QEREGP
Trigger: TGGGCCCTCTCTCTCCTGCCAGGACGCTGCGGCTCT...ACCGGCAGCTGACTGCACGGGCCCGAGCCTGGAACAACCTGGACTGGGCTCTCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
CDS-3UTR TCA 90 bp CCAGTCCAGGTTGTTCCAGGCTCGGGCCCGTGCAGTCAGCTGCCGGTCCTCCGCCCCAGAGACTGCGGTTaGAGTGGACATAGAGAGCCC +
Preference number: 4 (lower is better)
Translates to: PVQVVPGSGPCSQLPVLRPRDCG*SGHREP
Trigger: GGGCTCTCTATGTCCACTTCAACCGCAGTCTCTGGG...GCGGAGGACCGGCAGCTGACTGCACGGGCCCGAGCCTGGAACAACCTGGACTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
CDS-3UTR CCA 90 bp AGCACTGCTGGGAGCCCAGCGAAGAGGGGGCTTGCATCGGGACAAAGACTCATCCAGTCGCTGCCGGGGTaGGCAGGACGGAAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: STAGSPAKRGLASGQRLIQSLPG*AGRKGW
Trigger: CCAGCCCTTCCGTCCTGCCCACCCCGGCAGCGACTG...GATGAGTCTTTGTCCCGATGCAAGCCCCCTCTTCGCTGGGCTCCCAGCAGTGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360039.9
ENST00000413800.5
CDS-3UTR CCA 90 bp CCAGTCCAGGTTGTTCCAGGCTCGGGCCCGTGCAGTCAGCTGCCGGTCCTCCGCTTAGCTGACCCAAACTaGAAGGGGCGGAACCGGCGA +
Preference number: 4 (lower is better)
Translates to: PVQVVPGSGPCSQLPVLRLADPN*KGRNRR
Trigger: TCGCCGGTTCCGCCCCTTCCAGTTTGGGTCAGCTAA...GCGGAGGACCGGCAGCTGACTGCACGGGCCCGAGCCTGGAACAACCTGGACTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
CDS-3UTR GCA 90 bp AGCCCAGCGAAGAGGGGGCTTGCATCGGGACAAAGACTCATCCCTTCTGGGAGACCAGGCTCGGGCCCGTaGAGTCAGCTGCCGGTCCTC +
Preference number: 4 (lower is better)
Translates to: SPAKRGLASGQRLIPSGRPGSGP*SQLPVL
Trigger: GAGGACCGGCAGCTGACTGCACGGGCCCGAGCCTGG...TCTCCCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCCCCCTCTTCGCTGGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000423751.2
CDS-3UTR CCA 90 bp GGCTCGGGCCCGTGCAGTCAGCTGCCGGTCCTCCGCAGTCAGTCCACTGTTGCTGCCTGCTCACAGTCTTaGTTGAGTCTGCCCCCTGAG +
Preference number: 4 (lower is better)
Translates to: GSGPCSQLPVLRSQSTVAACSQS*LSLPPE
Trigger: CTCAGGGGGCAGACTCAACCAAGACTGTGAGCAGGC...AGCAACAGTGGACTGACTGCGGAGGACCGGCAGCTGACTGCACGGGCCCGAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423751.2
CDS-3UTR CCA 90 bp CAGGCTCGGGCCCGTGCAGTCAGCTGCCGGTCCTCCGCAGTCAGTCCACTGTTGTTGGGATTGAGGGTTTaGGCTCGAGGGCCAGCACCA +
Preference number: 4 (lower is better)
Translates to: QARARAVSCRSSAVSPLLLGLRV*ARGPAP
Trigger: TGGTGCTGGCCCTCGAGCCCAAACCCTCAATCCCAA...CAACAGTGGACTGACTGCGGAGGACCGGCAGCTGACTGCACGGGCCCGAGCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
CDS-3UTR GCA 90 bp GACAATGTTTCGCTAGGGCCTCTCGGCGAGCCCGGAGCTCGGCCACAGCTGTCTAGACAGCCGTGCAGCTaGGGAAGGCACTGGTTGGAG +
Preference number: 4 (lower is better)
Translates to: DNVSLGPLGEPGARPQLSRQPCS*GRHWLE
Trigger: CTCCAACCAGTGCCTTCCGCAGCTGCACGGCTGTCT...AGACAGCTGTGGCCGAGCTCCGGGCTCGCCGAGAGGCCCTAGCGAAACATTGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
CDS-3UTR GCA 90 bp CCTCACCCCCTACCAGACAATGTTTCGCTAGGGCCTCTCGGCGAGCCCGGAGCTAGACAGCCGTGCAGCTaGGGAAGGCACTGGTTGGAG +
Preference number: 4 (lower is better)
Translates to: PHPLPDNVSLGPLGEPGARQPCS*GRHWLE
Trigger: CTCCAACCAGTGCCTTCCGCAGCTGCACGGCTGTCT...AGCTCCGGGCTCGCCGAGAGGCCCTAGCGAAACATTGTCTGGTAGGGGGTGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
CDS-3UTR GCA 90 bp CGGGCCCGTGCAGTCAGCTGCCGGTCCTCCGCAGTCAGTCCACTGTTGCTGACAACAGTGCTGAGGCCCTaGTTATGTCCAGCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: RARAVSCRSSAVSPLLLTTVLRP*LCPAWA
Trigger: TGCCCAGGCTGGACATAAGCAGGGCCTCAGCACTGT...TGTCAGCAACAGTGGACTGACTGCGGAGGACCGGCAGCTGACTGCACGGGCCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
CDS-3UTR GCA 90 bp AGCACTGCTGGGAGCCCAGCGAAGAGGGGGCTTGCATCGGGACAAAGACTCATCTCGGCCACAGCTGTCTaGAGCCGGCCCTGGCCGTAT +
Preference number: 4 (lower is better)
Translates to: STAGSPAKRGLASGQRLISATAV*SRPWPY
Trigger: ATACGGCCAGGGCCGGCTGCAGACAGCTGTGGCCGA...GATGAGTCTTTGTCCCGATGCAAGCCCCCTCTTCGCTGGGCTCCCAGCAGTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000423751.2
CDS-3UTR CCA 90 bp CAGGCTCGGGCCCGTGCAGTCAGCTGCCGGTCCTCCGCAGTCAGTCCACTGTTGAGAAGCCTCGAGGATTaGCCAGGAAGGCAGCCAAAG +
Preference number: 4 (lower is better)
Translates to: QARARAVSCRSSAVSPLLRSLED*PGRQPK
Trigger: CTTTGGCTGCCTTCCTGGCCAATCCTCGAGGCTTCT...CAACAGTGGACTGACTGCGGAGGACCGGCAGCTGACTGCACGGGCCCGAGCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
CDS-3UTR CCA 90 bp AGAGAGCCCAGTCCAGGTTGTTCCAGGCTCGGGCCCGTGCAGTCAGCTGCCGGTGTCTGCAGCCGGCCCTaGCCGTATTTCTCTATCCGT +
Preference number: 4 (lower is better)
Translates to: REPSPGCSRLGPVQSAAGVCSRP*PYFSIR
Trigger: ACGGATAGAGAAATACGGCCAGGGCCGGCTGCAGAC...ACCGGCAGCTGACTGCACGGGCCCGAGCCTGGAACAACCTGGACTGGGCTCTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
CDS-3UTR TCA 90 bp GCCACAGCTGTCTGCAGCCGGCCCTGGCCGTATTTCTCTATCCGTGCCCAGAGACAGGGAAGGGTGAGGTaGCAGAGAGATGGAGCCAGG +
Preference number: 4 (lower is better)
Translates to: ATAVCSRPWPYFSIRAQRQGRVR*QRDGAR
Trigger: CCTGGCTCCATCTCTCTGTCACCTCACCCTTCCCTG...TCTCTGGGCACGGATAGAGAAATACGGCCAGGGCCGGCTGCAGACAGCTGTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
CDS-3UTR TCA 90 bp CCAGTCCAGGTTGTTCCAGGCTCGGGCCCGTGCAGTCAGCTGCCGGTCCTCCGCTGCCAGCAGAACCAATaGCTCATCGAAGTACTCAGC +
Preference number: 4 (lower is better)
Translates to: PVQVVPGSGPCSQLPVLRCQQNQ*LIEVLS
Trigger: GCTGAGTACTTCGATGAGTCATTGGTTCTGCTGGCA...GCGGAGGACCGGCAGCTGACTGCACGGGCCCGAGCCTGGAACAACCTGGACTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
CDS-3UTR TCA 90 bp AGAGAGCCCAGTCCAGGTTGTTCCAGGCTCGGGCCCGTGCAGTCAGCTGCCGGTCCTGGGCATTGTGCATaGAGCCCACCACGTCATCTA +
Preference number: 4 (lower is better)
Translates to: REPSPGCSRLGPVQSAAGPGHCA*SPPRHL
Trigger: TAGATGACGTGGTGGGCTTCATGCACAATGCCCAGG...ACCGGCAGCTGACTGCACGGGCCCGAGCCTGGAACAACCTGGACTGGGCTCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
CDS-3UTR TCA 90 bp ACCAGACAATGTTTCGCTAGGGCCTCTCGGCGAGCCCGGAGCTCGGCCACAGCTGCCCAAAACCTTAGCTaGCCCAAACTGGAAGGGGCG +
Preference number: 4 (lower is better)
Translates to: TRQCFARASRRARSSATAAQNLS*PKLEGA
Trigger: CGCCCCTTCCAGTTTGGGTCAGCTAAGGTTTTGGGC...AGCTGTGGCCGAGCTCCGGGCTCGCCGAGAGGCCCTAGCGAAACATTGTCTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
CDS-3UTR GCA 90 bp GGCTCGGGCCCGTGCAGTCAGCTGCCGGTCCTCCGCAGTCAGTCCACTGTTGCTAGCGAAGAGGGGGCTTaGATCGGGACAAAGACTCAT +
Preference number: 4 (lower is better)
Translates to: GSGPCSQLPVLRSQSTVASEEGA*IGTKTH
Trigger: ATGAGTCTTTGTCCCGATGCAAGCCCCCTCTTCGCT...AGCAACAGTGGACTGACTGCGGAGGACCGGCAGCTGACTGCACGGGCCCGAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423751.2
CDS-3UTR GCA 90 bp AGCACTGCTGGGAGCCCAGCGAAGAGGGGGCTTGCATCGGGACAAAGACTCATCGGAGGAGGGAAGCACTaGTGGGAGCCCAGCGAAGAG +
Preference number: 4 (lower is better)
Translates to: STAGSPAKRGLASGQRLIGGGKH*WEPSEE
Trigger: CTCTTCGCTGGGCTCCCAGCAGTGCTTCCCTCCTCC...GATGAGTCTTTGTCCCGATGCAAGCCCCCTCTTCGCTGGGCTCCCAGCAGTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000423751.2
CDS-3UTR CCA 90 bp CTGAGGCCCTGCTTATGTCCAGCCTGGGCATTGTGCATGAAGCCCACCACGTCAAGAGCCGCAGCGTCCTaGCAGGAGAGAGAGGGCCCA +
Preference number: 4 (lower is better)
Translates to: LRPCLCPAWALCMKPTTSRAAAS*QEREGP
Trigger: TGGGCCCTCTCTCTCCTGCCAGGACGCTGCGGCTCT...TGACGTGGTGGGCTTCATGCACAATGCCCAGGCTGGACATAAGCAGGGCCTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
CDS-3UTR CCA 90 bp GGCCACAGCTGTCTGCAGCCGGCCCTGGCCGTATTTCTCTATCCGTGCCCAGAGCTTGGCCCTCTTCTCTaGGGGAAAGGGCAGGCCAAA +
Preference number: 4 (lower is better)
Translates to: GHSCLQPALAVFLYPCPELGPLL*GKGQAK
Trigger: TTTGGCCTGCCCTTTCCCCCAGAGAAGAGGGCCAAG...CTCTGGGCACGGATAGAGAAATACGGCCAGGGCCGGCTGCAGACAGCTGTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
3UTR CAA 72 bp GCAGTCAGCTGCCGGTCCTCCGCAGTCAGTCCACTGTaGCTGACAGTGCTGAGGCCCTGCTTATGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: AVSCRSSAVSPL*LTVLRPCLCPA
Trigger: GGCTGGACATAAGCAGGGCCTCAGCACTGTCAGCAACAGTGGACTGACTGCGGAGGACCGGCAGCTGACTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
CDS-3UTR TCA 90 bp GGCCACAGCTGTCTGCAGCCGGCCCTGGCCGTATTTCTCTATCCGTGCCCAGAGCCTGGGCATTGTGCATaGAGCCCACCACGTCATCTA +
Preference number: 4 (lower is better)
Translates to: GHSCLQPALAVFLYPCPEPGHCA*SPPRHL
Trigger: TAGATGACGTGGTGGGCTTCATGCACAATGCCCAGG...CTCTGGGCACGGATAGAGAAATACGGCCAGGGCCGGCTGCAGACAGCTGTGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
CDS-3UTR TCA 90 bp CGGGCCCGTGCAGTCAGCTGCCGGTCCTCCGCAGTCAGTCCACTGTTGCTGACATCAGAAGGCATGACCTaGAGTACCTCCTCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: RARAVSCRSSAVSPLLLTSEGMT*STSSGR
Trigger: CCTTCCAGAGGAGGTACTTCAGGTCATGCCTTCTGA...TGTCAGCAACAGTGGACTGACTGCGGAGGACCGGCAGCTGACTGCACGGGCCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
CDS-3UTR GCA 90 bp CGAAGAGGGGGCTTGCATCGGGACAAAGACTCATCCCTTCTGGGAGATGCAGAAGGAAGGGGAGCTGGGTaGCTCCACCCTGTGGGCGGT +
Preference number: 4 (lower is better)
Translates to: RRGGLHRDKDSSLLGDAEGRGAG*LHPVGG
Trigger: ACCGCCCACAGGGTGGAGGCACCCAGCTCCCCTTCC...TTCTGCATCTCCCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCCCCCTCTTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360039.9
ENST00000413800.5
CDS-3UTR GCA 90 bp CAGGCTCGGGCCCGTGCAGTCAGCTGCCGGTCCTCCGCAGTCAGTCCACTGTTGCAAACCATAGTAAGTTaGGAGCGTAGTGGTCCCCAC +
Preference number: 4 (lower is better)
Translates to: QARARAVSCRSSAVSPLLQTIVS*ERSGPH
Trigger: GTGGGGACCACTACGCTCGCAACTTACTATGGTTTG...CAACAGTGGACTGACTGCGGAGGACCGGCAGCTGACTGCACGGGCCCGAGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
CDS-3UTR GCA 90 bp GCCACAGCTGTCTGCAGCCGGCCCTGGCCGTATTTCTCTATCCGTGCCCAGAGACCAGCCTGGGCATTGTaGATGAAGCCCACCACGTCA +
Preference number: 4 (lower is better)
Translates to: ATAVCSRPWPYFSIRAQRPAWAL*MKPTTS
Trigger: TGACGTGGTGGGCTTCATGCACAATGCCCAGGCTGG...TCTCTGGGCACGGATAGAGAAATACGGCCAGGGCCGGCTGCAGACAGCTGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
CDS-3UTR GCA 90 bp CCAGTCCAGGTTGTTCCAGGCTCGGGCCCGTGCAGTCAGCTGCCGGTCCTCCGCGTATTTCTCTATCCGTaGCCAGAGACTGCGGTTGAA +
Preference number: 4 (lower is better)
Translates to: PVQVVPGSGPCSQLPVLRVFLYP*PETAVE
Trigger: TTCAACCGCAGTCTCTGGGCACGGATAGAGAAATAC...GCGGAGGACCGGCAGCTGACTGCACGGGCCCGAGCCTGGAACAACCTGGACTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
CDS-3UTR GCA 90 bp CAGGCTCGGGCCCGTGCAGTCAGCTGCCGGTCCTCCGCAGTCAGTCCACTGTTGGAAATGGCATCTTGCTaGCCCCCACTCATCACATGT +
Preference number: 4 (lower is better)
Translates to: QARARAVSCRSSAVSPLLEMASC*PPLITC
Trigger: ACATGTGATGAGTGGGGGGCAGCAAGATGCCATTTC...CAACAGTGGACTGACTGCGGAGGACCGGCAGCTGACTGCACGGGCCCGAGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
CDS-3UTR CCA 90 bp GCCACAGCTGTCTGCAGCCGGCCCTGGCCGTATTTCTCTATCCGTGCCCAGAGAGGCCCTCCCAAGAGCTaGAGTGCAAAGCCAATGGTC +
Preference number: 4 (lower is better)
Translates to: ATAVCSRPWPYFSIRAQRGPPKS*SAKPMV
Trigger: GACCATTGGCTTTGCACTCCAGCTCTTGGGAGGGCC...TCTCTGGGCACGGATAGAGAAATACGGCCAGGGCCGGCTGCAGACAGCTGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
CDS-3UTR CCA 90 bp AGCCCAGCGAAGAGGGGGCTTGCATCGGGACAAAGACTCATCCCTTCTGGGAGAATGTGGAAGGGGAGCTaGGTGCCTCCACCCTGTGGG +
Preference number: 4 (lower is better)
Translates to: SPAKRGLASGQRLIPSGRMWKGS*VPPPCG
Trigger: CCCACAGGGTGGAGGCACCCAGCTCCCCTTCCACAT...TCTCCCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCCCCCTCTTCGCTGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360039.9
ENST00000413800.5
CDS-3UTR CCA 90 bp GTTGTTCCAGGCTCGGGCCCGTGCAGTCAGCTGCCGGTCCTCCGCAGTCAGTCCGAATATTCCCTCTCTTaGCCCTCTTCTCTGGGGGAA +
Preference number: 4 (lower is better)
Translates to: VVPGSGPCSQLPVLRSQSEYSLS*PSSLGE
Trigger: TTCCCCCAGAGAAGAGGGCCAAGAGAGGGAATATTC...GGACTGACTGCGGAGGACCGGCAGCTGACTGCACGGGCCCGAGCCTGGAACAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
CDS-3UTR CCA 90 bp AGCCCAGCGAAGAGGGGGCTTGCATCGGGACAAAGACTCATCCCTTCTGGGAGACAAGACCTGCAGCTGTaGGGGGTTGGGGTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: SPAKRGLASGQRLIPSGRQDLQL*GVGVSG
Trigger: CCCAGAGACCCCAACCCCCCACAGCTGCAGGTCTTG...TCTCCCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCCCCCTCTTCGCTGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000423751.2
CDS-3UTR CCA 90 bp GCCACAGCTGTCTGCAGCCGGCCCTGGCCGTATTTCTCTATCCGTGCCCAGAGAGTCTGCAGCCGGCCCTaGCCGTATTTCTCTATCCGT +
Preference number: 4 (lower is better)
Translates to: ATAVCSRPWPYFSIRAQRVCSRP*PYFSIR
Trigger: ACGGATAGAGAAATACGGCCAGGGCCGGCTGCAGAC...TCTCTGGGCACGGATAGAGAAATACGGCCAGGGCCGGCTGCAGACAGCTGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
CDS-3UTR CCA 90 bp GCCACAGCTGTCTGCAGCCGGCCCTGGCCGTATTTCTCTATCCGTGCCCAGAGACTGAAGTACCTCCTCTaGAAGGGCCCTCCCAAGAGC +
Preference number: 4 (lower is better)
Translates to: ATAVCSRPWPYFSIRAQRLKYLL*KGPPKS
Trigger: GCTCTTGGGAGGGCCCTTCCAGAGGAGGTACTTCAG...TCTCTGGGCACGGATAGAGAAATACGGCCAGGGCCGGCTGCAGACAGCTGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
CDS-3UTR TCA 90 bp AGCACTGCTGGGAGCCCAGCGAAGAGGGGGCTTGCATCGGGACAAAGACTCATCGCCCAAAACCTTAGCTaGCCCAAACTGGAAGGGGCG +
Preference number: 4 (lower is better)
Translates to: STAGSPAKRGLASGQRLIAQNLS*PKLEGA
Trigger: CGCCCCTTCCAGTTTGGGTCAGCTAAGGTTTTGGGC...GATGAGTCTTTGTCCCGATGCAAGCCCCCTCTTCGCTGGGCTCCCAGCAGTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000423751.2
CDS-3UTR TCA 90 bp GACAATGTTTCGCTAGGGCCTCTCGGCGAGCCCGGAGCTCGGCCACAGCTGTCTTCAGAAGGCATGACCTaGAGTACCTCCTCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: DNVSLGPLGEPGARPQLSSEGMT*STSSGR
Trigger: CCTTCCAGAGGAGGTACTTCAGGTCATGCCTTCTGA...AGACAGCTGTGGCCGAGCTCCGGGCTCGCCGAGAGGCCCTAGCGAAACATTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
CDS-3UTR GCA 90 bp CGAAGAGGGGGCTTGCATCGGGACAAAGACTCATCCCTTCTGGGAGATGCAGAAAGGAACACCAGTCGCTaGCGGGGTGGGCAGGACGGA +
Preference number: 4 (lower is better)
Translates to: RRGGLHRDKDSSLLGDAERNTSR*RGGQDG
Trigger: TCCGTCCTGCCCACCCCGGCAGCGACTGGTGTTCCT...TTCTGCATCTCCCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCCCCCTCTTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360039.9
ENST00000413800.5
CDS-3UTR GCA 90 bp TGGCTCACTCCATCTTTTGCCCCTCTAGGGAGCTTCGGTGATGTGGATCTGCCTAGGAACACCAGTCGCTaGCGGGGTGGGCAGGACGGA +
Preference number: 4 (lower is better)
Translates to: WLTPSFAPLGSFGDVDLPRNTSR*RGGQDG
Trigger: TCCGTCCTGCCCACCCCGGCAGCGACTGGTGTTCCT...AGGCAGATCCACATCACCGAAGCTCCCTAGAGGGGCAAAAGATGGAGTGAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360039.9
ENST00000413800.5
CDS-3UTR GCA 90 bp CCTCACCCCCTACCAGACAATGTTTCGCTAGGGCCTCTCGGCGAGCCCGGAGCTCCAAAGATGGTGACTTaGGGAAGGCTGATGAGGTGG +
Preference number: 4 (lower is better)
Translates to: PHPLPDNVSLGPLGEPGAPKMVT*GRLMRW
Trigger: CCACCTCATCAGCCTTCCGCAAGTCACCATCTTTGG...AGCTCCGGGCTCGCCGAGAGGCCCTAGCGAAACATTGTCTGGTAGGGGGTGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
CDS-3UTR GCA 90 bp TGGGAGCCCAGCGAAGAGGGGGCTTGCATCGGGACAAAGACTCATCCCTTCTGGCCAGCCTGGGCATTGTaGATGAAGCCCACCACGTCA +
Preference number: 4 (lower is better)
Translates to: WEPSEEGACIGTKTHPFWPAWAL*MKPTTS
Trigger: TGACGTGGTGGGCTTCATGCACAATGCCCAGGCTGG...CCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCCCCCTCTTCGCTGGGCTCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000423751.2
CDS-3UTR GCA 90 bp TTGCTGACAGTGCTGAGGCCCTGCTTATGTCCAGCCTGGGCATTGTGCATGAAGGCCCGTGCAGTCAGCTaGCGGTCCTCCGCAGTCAGT +
Preference number: 4 (lower is better)
Translates to: LLTVLRPCLCPAWALCMKARAVS*RSSAVS
Trigger: ACTGACTGCGGAGGACCGGCAGCTGACTGCACGGGC...CTTCATGCACAATGCCCAGGCTGGACATAAGCAGGGCCTCAGCACTGTCAGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
CDS-3UTR GCA 90 bp TGGCTCACTCCATCTTTTGCCCCTCTAGGGAGCTTCGGTGATGTGGATCTGCCTGCCCGTGCAGTCAGCTaGCGGTCCTCCGCAGTCAGT +
Preference number: 4 (lower is better)
Translates to: WLTPSFAPLGSFGDVDLPARAVS*RSSAVS
Trigger: ACTGACTGCGGAGGACCGGCAGCTGACTGCACGGGC...AGGCAGATCCACATCACCGAAGCTCCCTAGAGGGGCAAAAGATGGAGTGAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360039.9
ENST00000413800.5
CDS-3UTR GCA 90 bp CGAAGAGGGGGCTTGCATCGGGACAAAGACTCATCCCTTCTGGGAGATGCAGAAGCCCGTGCAGTCAGCTaGCGGTCCTCCGCAGTCAGT +
Preference number: 4 (lower is better)
Translates to: RRGGLHRDKDSSLLGDAEARAVS*RSSAVS
Trigger: ACTGACTGCGGAGGACCGGCAGCTGACTGCACGGGC...TTCTGCATCTCCCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCCCCCTCTTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000423751.2
CDS-3UTR GCA 90 bp GTTGCTGACAGTGCTGAGGCCCTGCTTATGTCCAGCCTGGGCATTGTGCATGAATCGGCCACAGCTGTCTaGAGCCGGCCCTGGCCGTAT +
Preference number: 4 (lower is better)
Translates to: VADSAEALLMSSLGIVHESATAV*SRPWPY
Trigger: ATACGGCCAGGGCCGGCTGCAGACAGCTGTGGCCGA...TTCATGCACAATGCCCAGGCTGGACATAAGCAGGGCCTCAGCACTGTCAGCAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
CDS-3UTR GCA 90 bp CGAAGAGGGGGCTTGCATCGGGACAAAGACTCATCCCTTCTGGGAGATGCAGAATCGGCCACAGCTGTCTaGAGCCGGCCCTGGCCGTAT +
Preference number: 4 (lower is better)
Translates to: RRGGLHRDKDSSLLGDAESATAV*SRPWPY
Trigger: ATACGGCCAGGGCCGGCTGCAGACAGCTGTGGCCGA...TTCTGCATCTCCCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCCCCCTCTTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000423751.2
CDS-3UTR GCA 90 bp AGCACTGCTGGGAGCCCAGCGAAGAGGGGGCTTGCATCGGGACAAAGACTCATCTCGGTGATGTGGATCTaGCTTGGGGCAGGAAAGGGG +
Preference number: 4 (lower is better)
Translates to: STAGSPAKRGLASGQRLISVMWI*LGAGKG
Trigger: CCCCTTTCCTGCCCCAAGGCAGATCCACATCACCGA...GATGAGTCTTTGTCCCGATGCAAGCCCCCTCTTCGCTGGGCTCCCAGCAGTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360039.9
ENST00000413800.5
CDS-3UTR CCA 90 bp TGGGAGCCCAGCGAAGAGGGGGCTTGCATCGGGACAAAGACTCATCCCTTCTGGGGCCCTCCCAAGAGCTaGAGTGCAAAGCCAATGGTC +
Preference number: 4 (lower is better)
Translates to: WEPSEEGACIGTKTHPFWGPPKS*SAKPMV
Trigger: GACCATTGGCTTTGCACTCCAGCTCTTGGGAGGGCC...CCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCCCCCTCTTCGCTGGGCTCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000423751.2
CDS-3UTR CCA 90 bp TGGGAGCCCAGCGAAGAGGGGGCTTGCATCGGGACAAAGACTCATCCCTTCTGGCTTGGCCCTCTTCTCTaGGGGAAAGGGCAGGCCAAA +
Preference number: 4 (lower is better)
Translates to: WEPSEEGACIGTKTHPFWLGPLL*GKGQAK
Trigger: TTTGGCCTGCCCTTTCCCCCAGAGAAGAGGGCCAAG...CCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCCCCCTCTTCGCTGGGCTCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000423751.2
CDS-3UTR CCA 90 bp AGCACTGCTGGGAGCCCAGCGAAGAGGGGGCTTGCATCGGGACAAAGACTCATCTTGGGATTGAGGGTTTaGGCTCGAGGGCCAGCACCA +
Preference number: 4 (lower is better)
Translates to: STAGSPAKRGLASGQRLILGLRV*ARGPAP
Trigger: TGGTGCTGGCCCTCGAGCCCAAACCCTCAATCCCAA...GATGAGTCTTTGTCCCGATGCAAGCCCCCTCTTCGCTGGGCTCCCAGCAGTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000423751.2
CDS-3UTR CCA 90 bp TGGGAGCCCAGCGAAGAGGGGGCTTGCATCGGGACAAAGACTCATCCCTTCTGGTTAGCTGACCCAAACTaGAAGGGGCGGAACCGGCGA +
Preference number: 4 (lower is better)
Translates to: WEPSEEGACIGTKTHPFWLADPN*KGRNRR
Trigger: TCGCCGGTTCCGCCCCTTCCAGTTTGGGTCAGCTAA...CCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCCCCCTCTTCGCTGGGCTCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000423751.2
CDS-3UTR CCA 90 bp TCACCCCCTACCAGACAATGTTTCGCTAGGGCCTCTCGGCGAGCCCGGAGCTCGCGCTCACATTCCTCTTaGTCTTGGGGGCTCAATCCA +
Preference number: 4 (lower is better)
Translates to: SPPTRQCFARASRRARSSRSHSS*SWGLNP
Trigger: TGGATTGAGCCCCCAAGACCAAGAGGAATGTGAGCG...CGAGCTCCGGGCTCGCCGAGAGGCCCTAGCGAAACATTGTCTGGTAGGGGGTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
CDS-3UTR TCA 90 bp CGTGCAGTCAGCTGCCGGTCCTCCGCAGTCAGTCCACTGTTGCTGACAGTGCTGGAAAGAGGCAGGGCTTaGTATCTGGCTGCGATGATC +
Preference number: 4 (lower is better)
Translates to: RAVSCRSSAVSPLLLTVLERGRA*YLAAMI
Trigger: GATCATCGCAGCCAGATATCAAGCCCTGCCTCTTTC...CAGCACTGTCAGCAACAGTGGACTGACTGCGGAGGACCGGCAGCTGACTGCACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
CDS-3UTR TCA 90 bp TGGGAGCCCAGCGAAGAGGGGGCTTGCATCGGGACAAAGACTCATCCCTTCTGGCCTGGGCATTGTGCATaGAGCCCACCACGTCATCTA +
Preference number: 4 (lower is better)
Translates to: WEPSEEGACIGTKTHPFWPGHCA*SPPRHL
Trigger: TAGATGACGTGGTGGGCTTCATGCACAATGCCCAGG...CCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCCCCCTCTTCGCTGGGCTCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000423751.2
CDS-3UTR TCA 90 bp GCCACAGCTGTCTGCAGCCGGCCCTGGCCGTATTTCTCTATCCGTGCCCAGAGAGGAACCGGCGATCAGTaGTGTATTTGGGGTCAGAAG +
Preference number: 4 (lower is better)
Translates to: ATAVCSRPWPYFSIRAQRGTGDQ*CIWGQK
Trigger: CTTCTGACCCCAAATACATCACTGATCGCCGGTTCC...TCTCTGGGCACGGATAGAGAAATACGGCCAGGGCCGGCTGCAGACAGCTGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
CDS-3UTR TCA 90 bp GTTGTTCCAGGCTCGGGCCCGTGCAGTCAGCTGCCGGTCCTCCGCAGTCAGTCCCCTAAATCTGTAGTCTaGTGTTTATGGGGAGAGTGG +
Preference number: 4 (lower is better)
Translates to: VVPGSGPCSQLPVLRSQSPKSVV*CLWGEW
Trigger: CCACTCTCCCCATAAACATCAGACTACAGATTTAGG...GGACTGACTGCGGAGGACCGGCAGCTGACTGCACGGGCCCGAGCCTGGAACAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
CDS-3UTR TCA 90 bp GGCTCGGGCCCGTGCAGTCAGCTGCCGGTCCTCCGCAGTCAGTCCACTGTTGCTCCTAAATCTGTAGTCTaGTGTTTATGGGGAGAGTGG +
Preference number: 4 (lower is better)
Translates to: GSGPCSQLPVLRSQSTVAPKSVV*CLWGEW
Trigger: CCACTCTCCCCATAAACATCAGACTACAGATTTAGG...AGCAACAGTGGACTGACTGCGGAGGACCGGCAGCTGACTGCACGGGCCCGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
CDS-3UTR TCA 90 bp TGGGAGCCCAGCGAAGAGGGGGCTTGCATCGGGACAAAGACTCATCCCTTCTGGGTGGATCACCTGAGGTaGGGAGTTCAAGACCAGCCT +
Preference number: 4 (lower is better)
Translates to: WEPSEEGACIGTKTHPFWVDHLR*GVQDQP
Trigger: AGGCTGGTCTTGAACTCCTCACCTCAGGTGATCCAC...CCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCCCCCTCTTCGCTGGGCTCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360039.9
ENST00000413800.5
CDS-3UTR TCA 90 bp CAGCTGTCTGCAGCCGGCCCTGGCCGTATTTCTCTATCCGTGCCCAGAGACTGCAGCTGTCAGAAGGCATaGCCTGAAGTACCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: QLSAAGPGRISLSVPRDCSCQKA*PEVPPL
Trigger: CAGAGGAGGTACTTCAGGTCATGCCTTCTGACAGCT...GCAGTCTCTGGGCACGGATAGAGAAATACGGCCAGGGCCGGCTGCAGACAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
CDS-3UTR GCA 90 bp TGGCTCACTCCATCTTTTGCCCCTCTAGGGAGCTTCGGTGATGTGGATCTGCCTAGCTGGAGACAGCCGTaGAGCTGCGGAAGGCACTGG +
Preference number: 4 (lower is better)
Translates to: WLTPSFAPLGSFGDVDLPSWRQP*SCGRHW
Trigger: CCAGTGCCTTCCGCAGCTGCACGGCTGTCTCCAGCT...AGGCAGATCCACATCACCGAAGCTCCCTAGAGGGGCAAAAGATGGAGTGAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360039.9
ENST00000413800.5
CDS-3UTR GCA 90 bp GAACCGGCGATCAGTGATGTATTTGGGGTCAGAAGCCTCACCCCCTACCAGACAAGCTGGAGACAGCCGTaGAGCTGCGGAAGGCACTGG +
Preference number: 4 (lower is better)
Translates to: EPAISDVFGVRSLTPYQTSWRQP*SCGRHW
Trigger: CCAGTGCCTTCCGCAGCTGCACGGCTGTCTCCAGCT...TGTCTGGTAGGGGGTGAGGCTTCTGACCCCAAATACATCACTGATCGCCGGTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
CDS-3UTR GCA 90 bp GACAATGTTTCGCTAGGGCCTCTCGGCGAGCCCGGAGCTCGGCCACAGCTGTCTCAAACCATAGTAAGTTaGGAGCGTAGTGGTCCCCAC +
Preference number: 4 (lower is better)
Translates to: DNVSLGPLGEPGARPQLSQTIVS*ERSGPH
Trigger: GTGGGGACCACTACGCTCGCAACTTACTATGGTTTG...AGACAGCTGTGGCCGAGCTCCGGGCTCGCCGAGAGGCCCTAGCGAAACATTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
CDS-3UTR GCA 90 bp TGCCGGTCCTCCGCAGTCAGTCCACTGTTGCTGACAGTGCTGAGGCCCTGCTTAGACAGAGTCCAGCCATaGCAGACCCCACTGGATGAA +
Preference number: 4 (lower is better)
Translates to: CRSSAVSPLLLTVLRPCLDRVQP*QTPLDE
Trigger: TTCATCCAGTGGGGTCTGGCATGGCTGGACTCTGTC...TAAGCAGGGCCTCAGCACTGTCAGCAACAGTGGACTGACTGCGGAGGACCGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
CDS-3UTR GCA 90 bp GGGCTTGCATCGGGACAAAGACTCATCCCTTCTGGGAGATGCAGAAATGGCATCGCCCGTGCAGTCAGCTaGCGGTCCTCCGCAGTCAGT +
Preference number: 4 (lower is better)
Translates to: GLASGQRLIPSGRCRNGIARAVS*RSSAVS
Trigger: ACTGACTGCGGAGGACCGGCAGCTGACTGCACGGGC...GATGCCATTTCTGCATCTCCCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000423751.2
CDS-3UTR GCA 90 bp AGAAATGGACGTATCATTCCAACTCACCACGCCCCAAACTTCCTGTGGCTCACTCCAGGCTCGGGCCCGTaGAGTCAGCTGCCGGTCCTC +
Preference number: 4 (lower is better)
Translates to: RNGRIIPTHHAPNFLWLTPGSGP*SQLPVL
Trigger: GAGGACCGGCAGCTGACTGCACGGGCCCGAGCCTGG...AGTGAGCCACAGGAAGTTTGGGGCGTGGTGAGTTGGAATGATACGTCCATTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360039.9
ENST00000413800.5
CDS-3UTR GCA 90 bp CGGGCCCGTGCAGTCAGCTGCCGGTCCTCCGCAGTCAGTCCACTGTTGCTGACAGTATTTCTCTATCCGTaGCCAGAGACTGCGGTTGAA +
Preference number: 4 (lower is better)
Translates to: RARAVSCRSSAVSPLLLTVFLYP*PETAVE
Trigger: TTCAACCGCAGTCTCTGGGCACGGATAGAGAAATAC...TGTCAGCAACAGTGGACTGACTGCGGAGGACCGGCAGCTGACTGCACGGGCCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
CDS-3UTR CCA 90 bp GGGCTTGCATCGGGACAAAGACTCATCCCTTCTGGGAGATGCAGAAATGGCATCAGAGCCGCAGCGTCCTaGCAGGAGAGAGAGGGCCCA +
Preference number: 4 (lower is better)
Translates to: GLASGQRLIPSGRCRNGIRAAAS*QEREGP
Trigger: TGGGCCCTCTCTCTCCTGCCAGGACGCTGCGGCTCT...GATGCCATTTCTGCATCTCCCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000423751.2
CDS-3UTR CCA 90 bp AGCCCAGCGAAGAGGGGGCTTGCATCGGGACAAAGACTCATCCCTTCTGGGAGAGGCCCTCCCAAGAGCTaGAGTGCAAAGCCAATGGTC +
Preference number: 4 (lower is better)
Translates to: SPAKRGLASGQRLIPSGRGPPKS*SAKPMV
Trigger: GACCATTGGCTTTGCACTCCAGCTCTTGGGAGGGCC...TCTCCCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCCCCCTCTTCGCTGGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000423751.2
CDS-3UTR CCA 90 bp CTGAGGCCCTGCTTATGTCCAGCCTGGGCATTGTGCATGAAGCCCACCACGTCACTTGGCCCTCTTCTCTaGGGGAAAGGGCAGGCCAAA +
Preference number: 4 (lower is better)
Translates to: LRPCLCPAWALCMKPTTSLGPLL*GKGQAK
Trigger: TTTGGCCTGCCCTTTCCCCCAGAGAAGAGGGCCAAG...TGACGTGGTGGGCTTCATGCACAATGCCCAGGCTGGACATAAGCAGGGCCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
CDS-3UTR CCA 90 bp TTGCTGACAGTGCTGAGGCCCTGCTTATGTCCAGCCTGGGCATTGTGCATGAAGCAAGACCTGCAGCTGTaGGGGGTTGGGGTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: LLTVLRPCLCPAWALCMKQDLQL*GVGVSG
Trigger: CCCAGAGACCCCAACCCCCCACAGCTGCAGGTCTTG...CTTCATGCACAATGCCCAGGCTGGACATAAGCAGGGCCTCAGCACTGTCAGCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
CDS-3UTR CCA 90 bp TGGCTCACTCCATCTTTTGCCCCTCTAGGGAGCTTCGGTGATGTGGATCTGCCTCAAGACCTGCAGCTGTaGGGGGTTGGGGTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: WLTPSFAPLGSFGDVDLPQDLQL*GVGVSG
Trigger: CCCAGAGACCCCAACCCCCCACAGCTGCAGGTCTTG...AGGCAGATCCACATCACCGAAGCTCCCTAGAGGGGCAAAAGATGGAGTGAGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000360039.9
ENST00000413800.5
CDS-3UTR CCA 90 bp GCCACAGCTGTCTGCAGCCGGCCCTGGCCGTATTTCTCTATCCGTGCCCAGAGAAGCTTGTCCTTGTACTaGAGCTCAGGGGTAGCTAGG +
Preference number: 4 (lower is better)
Translates to: ATAVCSRPWPYFSIRAQRSLSLY*SSGVAR
Trigger: CCTAGCTACCCCTGAGCTCCAGTACAAGGACAAGCT...TCTCTGGGCACGGATAGAGAAATACGGCCAGGGCCGGCTGCAGACAGCTGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
CDS-3UTR CCA 90 bp CAGCTGTCTGCAGCCGGCCCTGGCCGTATTTCTCTATCCGTGCCCAGAGACTGCAGCTTGTCCTTGTACTaGAGCTCAGGGGTAGCTAGG +
Preference number: 4 (lower is better)
Translates to: QLSAAGPGRISLSVPRDCSLSLY*SSGVAR
Trigger: CCTAGCTACCCCTGAGCTCCAGTACAAGGACAAGCT...GCAGTCTCTGGGCACGGATAGAGAAATACGGCCAGGGCCGGCTGCAGACAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
CDS-3UTR TCA 90 bp CGAAGAGGGGGCTTGCATCGGGACAAAGACTCATCCCTTCTGGGAGATGCAGAACAGGGAAGGGTGAGGTaGCAGAGAGATGGAGCCAGG +
Preference number: 4 (lower is better)
Translates to: RRGGLHRDKDSSLLGDAEQGRVR*QRDGAR
Trigger: CCTGGCTCCATCTCTCTGTCACCTCACCCTTCCCTG...TTCTGCATCTCCCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCCCCCTCTTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000423751.2
CDS-3UTR TCA 90 bp TGGGAGCCCAGCGAAGAGGGGGCTTGCATCGGGACAAAGACTCATCCCTTCTGGGAAAGAGGCAGGGCTTaGTATCTGGCTGCGATGATC +
Preference number: 4 (lower is better)
Translates to: WEPSEEGACIGTKTHPFWERGRA*YLAAMI
Trigger: GATCATCGCAGCCAGATATCAAGCCCTGCCTCTTTC...CCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCCCCCTCTTCGCTGGGCTCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000423751.2
CDS-3UTR TCA 90 bp TGGGAGCCCAGCGAAGAGGGGGCTTGCATCGGGACAAAGACTCATCCCTTCTGGGGAACCGGCGATCAGTaGTGTATTTGGGGTCAGAAG +
Preference number: 4 (lower is better)
Translates to: WEPSEEGACIGTKTHPFWGTGDQ*CIWGQK
Trigger: CTTCTGACCCCAAATACATCACTGATCGCCGGTTCC...CCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCCCCCTCTTCGCTGGGCTCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000423751.2
CDS-3UTR TCA 90 bp AGCACTGCTGGGAGCCCAGCGAAGAGGGGGCTTGCATCGGGACAAAGACTCATCGGAACCGGCGATCAGTaGTGTATTTGGGGTCAGAAG +
Preference number: 4 (lower is better)
Translates to: STAGSPAKRGLASGQRLIGTGDQ*CIWGQK
Trigger: CTTCTGACCCCAAATACATCACTGATCGCCGGTTCC...GATGAGTCTTTGTCCCGATGCAAGCCCCCTCTTCGCTGGGCTCCCAGCAGTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000423751.2
CDS-3UTR TCA 90 bp TGGGAGCCCAGCGAAGAGGGGGCTTGCATCGGGACAAAGACTCATCCCTTCTGGGTCATGTGGATCACCTaGGGTGAGGAGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: WEPSEEGACIGTKTHPFWVMWIT*GEEFKT
Trigger: GGTCTTGAACTCCTCACCTCAGGTGATCCACATGAC...CCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCCCCCTCTTCGCTGGGCTCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360039.9
ENST00000413800.5
CDS-3UTR GCA 90 bp GCTAGGCGCTCACATTCCTCTTGGTCTTGGGGGCTCAATCCACTCCGAAGTATAAGCTGGAGACAGCCGTaGAGCTGCGGAAGGCACTGG +
Preference number: 4 (lower is better)
Translates to: ARRSHSSWSWGLNPLRSISWRQP*SCGRHW
Trigger: CCAGTGCCTTCCGCAGCTGCACGGCTGTCTCCAGCT...TATACTTCGGAGTGGATTGAGCCCCCAAGACCAAGAGGAATGTGAGCGCCTAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
CDS-3UTR GCA 90 bp ACCAGACAATGTTTCGCTAGGGCCTCTCGGCGAGCCCGGAGCTCGGCCACAGCTTCCCAAGAGCTGGAGTaGAAAGCCAATGGTCATGAA +
Preference number: 4 (lower is better)
Translates to: TRQCFARASRRARSSATASQELE*KANGHE
Trigger: TTCATGACCATTGGCTTTGCACTCCAGCTCTTGGGA...AGCTGTGGCCGAGCTCCGGGCTCGCCGAGAGGCCCTAGCGAAACATTGTCTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
CDS-3UTR GCA 90 bp AGCACTGCTGGGAGCCCAGCGAAGAGGGGGCTTGCATCGGGACAAAGACTCATCCCAAAGATGGTGACTTaGGGAAGGCTGATGAGGTGG +
Preference number: 4 (lower is better)
Translates to: STAGSPAKRGLASGQRLIPKMVT*GRLMRW
Trigger: CCACCTCATCAGCCTTCCGCAAGTCACCATCTTTGG...GATGAGTCTTTGTCCCGATGCAAGCCCCCTCTTCGCTGGGCTCCCAGCAGTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000423751.2
CDS-3UTR GCA 90 bp AGCCCAGCGAAGAGGGGGCTTGCATCGGGACAAAGACTCATCCCTTCTGGGAGAGACAGAGTCCAGCCATaGCAGACCCCACTGGATGAA +
Preference number: 4 (lower is better)
Translates to: SPAKRGLASGQRLIPSGRDRVQP*QTPLDE
Trigger: TTCATCCAGTGGGGTCTGGCATGGCTGGACTCTGTC...TCTCCCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCCCCCTCTTCGCTGGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000423751.2
CDS-3UTR GCA 90 bp TCCACTGTTGCTGACAGTGCTGAGGCCCTGCTTATGTCCAGCCTGGGCATTGTGCCAGCCTGGGCATTGTaGATGAAGCCCACCACGTCA +
Preference number: 4 (lower is better)
Translates to: STVADSAEALLMSSLGIVPAWAL*MKPTTS
Trigger: TGACGTGGTGGGCTTCATGCACAATGCCCAGGCTGG...CACAATGCCCAGGCTGGACATAAGCAGGGCCTCAGCACTGTCAGCAACAGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
CDS-3UTR GCA 90 bp GGCTTGCATCGGGACAAAGACTCATCCCTTCTGGGAGATGCAGAAATGGCATCTTCGGCCACAGCTGTCTaGAGCCGGCCCTGGCCGTAT +
Preference number: 4 (lower is better)
Translates to: GLHRDKDSSLLGDAEMASSATAV*SRPWPY
Trigger: ATACGGCCAGGGCCGGCTGCAGACAGCTGTGGCCGA...AGATGCCATTTCTGCATCTCCCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000423751.2
CDS-3UTR GCA 90 bp CAGCTGTCTGCAGCCGGCCCTGGCCGTATTTCTCTATCCGTGCCCAGAGACTGCGAAATGGCATCTTGCTaGCCCCCACTCATCACATGT +
Preference number: 4 (lower is better)
Translates to: QLSAAGPGRISLSVPRDCEMASC*PPLITC
Trigger: ACATGTGATGAGTGGGGGGCAGCAAGATGCCATTTC...GCAGTCTCTGGGCACGGATAGAGAAATACGGCCAGGGCCGGCTGCAGACAGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
CDS-3UTR GCA 90 bp GCTAGGCGCTCACATTCCTCTTGGTCTTGGGGGCTCAATCCACTCCGAAGTATAGGAGGAGGGAAGCACTaGTGGGAGCCCAGCGAAGAG +
Preference number: 4 (lower is better)
Translates to: ARRSHSSWSWGLNPLRSIGGGKH*WEPSEE
Trigger: CTCTTCGCTGGGCTCCCAGCAGTGCTTCCCTCCTCC...TATACTTCGGAGTGGATTGAGCCCCCAAGACCAAGAGGAATGTGAGCGCCTAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423751.2
CDS-3UTR GCA 90 bp AGCCCAGCGAAGAGGGGGCTTGCATCGGGACAAAGACTCATCCCTTCTGGGAGAGCTCACTCCATCTTTTaGCCCTCTAGGGAGCTTCGG +
Preference number: 4 (lower is better)
Translates to: SPAKRGLASGQRLIPSGRAHSIF*PSRELR
Trigger: CCGAAGCTCCCTAGAGGGGCAAAAGATGGAGTGAGC...TCTCCCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCCCCCTCTTCGCTGGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360039.9
ENST00000413800.5
CDS-3UTR CCA 90 bp TCCTCCGCAGTCAGTCCACTGTTGCTGACAGTGCTGAGGCCCTGCTTATGTCCAGGCCCTCCCAAGAGCTaGAGTGCAAAGCCAATGGTC +
Preference number: 4 (lower is better)
Translates to: SSAVSPLLLTVLRPCLCPGPPKS*SAKPMV
Trigger: GACCATTGGCTTTGCACTCCAGCTCTTGGGAGGGCC...TGGACATAAGCAGGGCCTCAGCACTGTCAGCAACAGTGGACTGACTGCGGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
CDS-3UTR CCA 90 bp CAGCTGTCTGCAGCCGGCCCTGGCCGTATTTCTCTATCCGTGCCCAGAGACTGCGAATATTCCCTCTCTTaGCCCTCTTCTCTGGGGGAA +
Preference number: 4 (lower is better)
Translates to: QLSAAGPGRISLSVPRDCEYSLS*PSSLGE
Trigger: TTCCCCCAGAGAAGAGGGCCAAGAGAGGGAATATTC...GCAGTCTCTGGGCACGGATAGAGAAATACGGCCAGGGCCGGCTGCAGACAGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
CDS-3UTR CCA 90 bp CTGAGGCCCTGCTTATGTCCAGCCTGGGCATTGTGCATGAAGCCCACCACGTCACATGCCAGACCCCACTaGATGAAGGATGAAGACCCC +
Preference number: 4 (lower is better)
Translates to: LRPCLCPAWALCMKPTTSHARPH*MKDEDP
Trigger: GGGGTCTTCATCCTTCATCCAGTGGGGTCTGGCATG...TGACGTGGTGGGCTTCATGCACAATGCCCAGGCTGGACATAAGCAGGGCCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
CDS-3UTR CCA 90 bp TGCCGGTCCTCCGCAGTCAGTCCACTGTTGCTGACAGTGCTGAGGCCCTGCTTATGCTTATGTCCAGCCTaGGCATTGTGCATGAAGCCC +
Preference number: 4 (lower is better)
Translates to: CRSSAVSPLLLTVLRPCLCLCPA*ALCMKP
Trigger: GGGCTTCATGCACAATGCCCAGGCTGGACATAAGCA...TAAGCAGGGCCTCAGCACTGTCAGCAACAGTGGACTGACTGCGGAGGACCGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
CDS-3UTR CCA 90 bp AGCACTGCTGGGAGCCCAGCGAAGAGGGGGCTTGCATCGGGACAAAGACTCATCCGCTCACATTCCTCTTaGTCTTGGGGGCTCAATCCA +
Preference number: 4 (lower is better)
Translates to: STAGSPAKRGLASGQRLIRSHSS*SWGLNP
Trigger: TGGATTGAGCCCCCAAGACCAAGAGGAATGTGAGCG...GATGAGTCTTTGTCCCGATGCAAGCCCCCTCTTCGCTGGGCTCCCAGCAGTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000423751.2
CDS-3UTR TCA 90 bp TCCTCCGCAGTCAGTCCACTGTTGCTGACAGTGCTGAGGCCCTGCTTATGTCCACAAAGCCAATGGTCATaGAGACTCCCAGAGCCACCC +
Preference number: 4 (lower is better)
Translates to: SSAVSPLLLTVLRPCLCPQSQWS*RLPEPP
Trigger: GGGTGGCTCTGGGAGTCTTCATGACCATTGGCTTTG...TGGACATAAGCAGGGCCTCAGCACTGTCAGCAACAGTGGACTGACTGCGGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
CDS-3UTR TCA 90 bp GAACCGGCGATCAGTGATGTATTTGGGGTCAGAAGCCTCACCCCCTACCAGACAGCCCAAAACCTTAGCTaGCCCAAACTGGAAGGGGCG +
Preference number: 4 (lower is better)
Translates to: EPAISDVFGVRSLTPYQTAQNLS*PKLEGA
Trigger: CGCCCCTTCCAGTTTGGGTCAGCTAAGGTTTTGGGC...TGTCTGGTAGGGGGTGAGGCTTCTGACCCCAAATACATCACTGATCGCCGGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
CDS-3UTR TCA 90 bp AGCCCAGCGAAGAGGGGGCTTGCATCGGGACAAAGACTCATCCCTTCTGGGAGAGTCATGTGGATCACCTaGGGTGAGGAGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: SPAKRGLASGQRLIPSGRVMWIT*GEEFKT
Trigger: GGTCTTGAACTCCTCACCTCAGGTGATCCACATGAC...TCTCCCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCCCCCTCTTCGCTGGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360039.9
ENST00000413800.5
CDS-3UTR TCA 90 bp CGAAGAGGGGGCTTGCATCGGGACAAAGACTCATCCCTTCTGGGAGATGCAGAATCTAGGGAGCTTCGGTaGTGTGGATCTGCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: RRGGLHRDKDSSLLGDAESRELR*CGSALG
Trigger: CCCCAAGGCAGATCCACATCACCGAAGCTCCCTAGA...TTCTGCATCTCCCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCCCCCTCTTCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360039.9
ENST00000413800.5
CDS-3UTR TCA 90 bp CTGAGGCCCTGCTTATGTCCAGCCTGGGCATTGTGCATGAAGCCCACCACGTCAAGCTGTCAGAAGGCATaGCCTGAAGTACCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: LRPCLCPAWALCMKPTTSSCQKA*PEVPPL
Trigger: CAGAGGAGGTACTTCAGGTCATGCCTTCTGACAGCT...TGACGTGGTGGGCTTCATGCACAATGCCCAGGCTGGACATAAGCAGGGCCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
CDS-3UTR GCA 90 bp AGCCCAGCGAAGAGGGGGCTTGCATCGGGACAAAGACTCATCCCTTCTGGGAGAGGCTCAGCACAGAGCTaGTCCCGGATTTATGTGTCT +
Preference number: 4 (lower is better)
Translates to: SPAKRGLASGQRLIPSGRGSAQS*SRIYVS
Trigger: AGACACATAAATCCGGGAGCAGCTCTGTGCTGAGCC...TCTCCCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCCCCCTCTTCGCTGGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360039.9
ENST00000413800.5
CDS-3UTR GCA 90 bp AGCACTGCTGGGAGCCCAGCGAAGAGGGGGCTTGCATCGGGACAAAGACTCATCCCCACTCATCACATGTaGCCTTCAAACATGGCTGCT +
Preference number: 4 (lower is better)
Translates to: STAGSPAKRGLASGQRLIPTHHM*PSNMAA
Trigger: AGCAGCCATGTTTGAAGGGCACATGTGATGAGTGGG...GATGAGTCTTTGTCCCGATGCAAGCCCCCTCTTCGCTGGGCTCCCAGCAGTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000423751.2
CDS-3UTR GCA 90 bp TGCCGGTCCTCCGCAGTCAGTCCACTGTTGCTGACAGTGCTGAGGCCCTGCTTACCCACTCATCACATGTaGCCTTCAAACATGGCTGCT +
Preference number: 4 (lower is better)
Translates to: CRSSAVSPLLLTVLRPCLPTHHM*PSNMAA
Trigger: AGCAGCCATGTTTGAAGGGCACATGTGATGAGTGGG...TAAGCAGGGCCTCAGCACTGTCAGCAACAGTGGACTGACTGCGGAGGACCGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
CDS-3UTR GCA 90 bp TGGGAGCCCAGCGAAGAGGGGGCTTGCATCGGGACAAAGACTCATCCCTTCTGGGAAATGGCATCTTGCTaGCCCCCACTCATCACATGT +
Preference number: 4 (lower is better)
Translates to: WEPSEEGACIGTKTHPFWEMASC*PPLITC
Trigger: ACATGTGATGAGTGGGGGGCAGCAAGATGCCATTTC...CCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCCCCCTCTTCGCTGGGCTCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000423751.2
CDS-3UTR CCA 90 bp CGAAGAGGGGGCTTGCATCGGGACAAAGACTCATCCCTTCTGGGAGATGCAGAAGCCTGCTCACAGTCTTaGTTGAGTCTGCCCCCTGAG +
Preference number: 4 (lower is better)
Translates to: RRGGLHRDKDSSLLGDAEACSQS*LSLPPE
Trigger: CTCAGGGGGCAGACTCAACCAAGACTGTGAGCAGGC...TTCTGCATCTCCCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCCCCCTCTTCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000423751.2
CDS-3UTR CCA 90 bp GGCTTGCATCGGGACAAAGACTCATCCCTTCTGGGAGATGCAGAAATGGCATCTAGGGGCAGAGACAGCTaGAGACAGCCGTGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: GLHRDKDSSLLGDAEMASRGRDS*RQPCSC
Trigger: GCAGCTGCACGGCTGTCTCCAGCTGTCTCTGCCCCT...AGATGCCATTTCTGCATCTCCCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000423751.2
CDS-3UTR CCA 90 bp AGAAATGGACGTATCATTCCAACTCACCACGCCCCAAACTTCCTGTGGCTCACTAGAGCCGCAGCGTCCTaGCAGGAGAGAGAGGGCCCA +
Preference number: 4 (lower is better)
Translates to: RNGRIIPTHHAPNFLWLTRAAAS*QEREGP
Trigger: TGGGCCCTCTCTCTCCTGCCAGGACGCTGCGGCTCT...AGTGAGCCACAGGAAGTTTGGGGCGTGGTGAGTTGGAATGATACGTCCATTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360039.9
ENST00000413800.5
CDS-3UTR CCA 90 bp GGGCTTGCATCGGGACAAAGACTCATCCCTTCTGGGAGATGCAGAAATGGCATCGGTGCCTCCACCCTGTaGGCGGTAGCCTTTTACCCT +
Preference number: 4 (lower is better)
Translates to: GLASGQRLIPSGRCRNGIGASTL*AVAFYP
Trigger: AGGGTAAAAGGCTACCGCCCACAGGGTGGAGGCACC...GATGCCATTTCTGCATCTCCCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360039.9
ENST00000413800.5
CDS-3UTR CCA 90 bp GACAATGTTTCGCTAGGGCCTCTCGGCGAGCCCGGAGCTCGGCCACAGCTGTCTGGAAGGCTGATGAGGTaGATTTATAGTAGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: DNVSLGPLGEPGARPQLSGRLMR*IYSRRR
Trigger: CCTTCTCCTACTATAAATCCACCTCATCAGCCTTCC...AGACAGCTGTGGCCGAGCTCCGGGCTCGCCGAGAGGCCCTAGCGAAACATTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
CDS-3UTR CCA 90 bp CGAAGAGGGGGCTTGCATCGGGACAAAGACTCATCCCTTCTGGGAGATGCAGAATTGGGATTGAGGGTTTaGGCTCGAGGGCCAGCACCA +
Preference number: 4 (lower is better)
Translates to: RRGGLHRDKDSSLLGDAELGLRV*ARGPAP
Trigger: TGGTGCTGGCCCTCGAGCCCAAACCCTCAATCCCAA...TTCTGCATCTCCCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCCCCCTCTTCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000423751.2
CDS-3UTR CCA 90 bp TGGCTCACTCCATCTTTTGCCCCTCTAGGGAGCTTCGGTGATGTGGATCTGCCTTTAGCTGACCCAAACTaGAAGGGGCGGAACCGGCGA +
Preference number: 4 (lower is better)
Translates to: WLTPSFAPLGSFGDVDLPLADPN*KGRNRR
Trigger: TCGCCGGTTCCGCCCCTTCCAGTTTGGGTCAGCTAA...AGGCAGATCCACATCACCGAAGCTCCCTAGAGGGGCAAAAGATGGAGTGAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360039.9
ENST00000413800.5
CDS-3UTR CCA 90 bp GAACCGGCGATCAGTGATGTATTTGGGGTCAGAAGCCTCACCCCCTACCAGACATTAGCTGACCCAAACTaGAAGGGGCGGAACCGGCGA +
Preference number: 4 (lower is better)
Translates to: EPAISDVFGVRSLTPYQTLADPN*KGRNRR
Trigger: TCGCCGGTTCCGCCCCTTCCAGTTTGGGTCAGCTAA...TGTCTGGTAGGGGGTGAGGCTTCTGACCCCAAATACATCACTGATCGCCGGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
CDS-3UTR CCA 90 bp CTGAGGCCCTGCTTATGTCCAGCCTGGGCATTGTGCATGAAGCCCACCACGTCACATTCCTCTTGGTCTTaGGGGCTCAATCCACTCCGA +
Preference number: 4 (lower is better)
Translates to: LRPCLCPAWALCMKPTTSHSSWS*GLNPLR
Trigger: TCGGAGTGGATTGAGCCCCCAAGACCAAGAGGAATG...TGACGTGGTGGGCTTCATGCACAATGCCCAGGCTGGACATAAGCAGGGCCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
CDS-3UTR CCA 90 bp AGCCCAGCGAAGAGGGGGCTTGCATCGGGACAAAGACTCATCCCTTCTGGGAGACGCTCACATTCCTCTTaGTCTTGGGGGCTCAATCCA +
Preference number: 4 (lower is better)
Translates to: SPAKRGLASGQRLIPSGRRSHSS*SWGLNP
Trigger: TGGATTGAGCCCCCAAGACCAAGAGGAATGTGAGCG...TCTCCCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCCCCCTCTTCGCTGGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000423751.2
CDS-3UTR CCA 90 bp TCACCCCCTACCAGACAATGTTTCGCTAGGGCCTCTCGGCGAGCCCGGAGCTCGAAGACTCATCCCTTCTaGGAGATGCAGAAATGGCAT +
Preference number: 4 (lower is better)
Translates to: SPPTRQCFARASRRARSSKTHPF*EMQKWH
Trigger: ATGCCATTTCTGCATCTCCCAGAAGGGATGAGTCTT...CGAGCTCCGGGCTCGCCGAGAGGCCCTAGCGAAACATTGTCTGGTAGGGGGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
CDS-3UTR CCA 90 bp TGGCTCACTCCATCTTTTGCCCCTCTAGGGAGCTTCGGTGATGTGGATCTGCCTGGAGCTTCGGTGATGTaGATCTGCCTTGGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: WLTPSFAPLGSFGDVDLPGASVM*ICLGAG
Trigger: TCCTGCCCCAAGGCAGATCCACATCACCGAAGCTCC...AGGCAGATCCACATCACCGAAGCTCCCTAGAGGGGCAAAAGATGGAGTGAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360039.9
ENST00000413800.5
CDS-3UTR TCA 90 bp GGCTTGCATCGGGACAAAGACTCATCCCTTCTGGGAGATGCAGAAATGGCATCTCAGGGAAGGGTGAGGTaGCAGAGAGATGGAGCCAGG +
Preference number: 4 (lower is better)
Translates to: GLHRDKDSSLLGDAEMASQGRVR*QRDGAR
Trigger: CCTGGCTCCATCTCTCTGTCACCTCACCCTTCCCTG...AGATGCCATTTCTGCATCTCCCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000423751.2
CDS-3UTR TCA 90 bp TGGCTCACTCCATCTTTTGCCCCTCTAGGGAGCTTCGGTGATGTGGATCTGCCTCAAAGCCAATGGTCATaGAGACTCCCAGAGCCACCC +
Preference number: 4 (lower is better)
Translates to: WLTPSFAPLGSFGDVDLPQSQWS*RLPEPP
Trigger: GGGTGGCTCTGGGAGTCTTCATGACCATTGGCTTTG...AGGCAGATCCACATCACCGAAGCTCCCTAGAGGGGCAAAAGATGGAGTGAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360039.9
ENST00000413800.5
CDS-3UTR TCA 90 bp CGAAGAGGGGGCTTGCATCGGGACAAAGACTCATCCCTTCTGGGAGATGCAGAACAAAGCCAATGGTCATaGAGACTCCCAGAGCCACCC +
Preference number: 4 (lower is better)
Translates to: RRGGLHRDKDSSLLGDAEQSQWS*RLPEPP
Trigger: GGGTGGCTCTGGGAGTCTTCATGACCATTGGCTTTG...TTCTGCATCTCCCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCCCCCTCTTCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000423751.2
CDS-3UTR TCA 90 bp CCCAAACTGGAAGGGGCGGAACCGGCGATCAGTGATGTATTTGGGGTCAGAAGCGAAAGAGGCAGGGCTTaGTATCTGGCTGCGATGATC +
Preference number: 4 (lower is better)
Translates to: PKLEGAEPAISDVFGVRSERGRA*YLAAMI
Trigger: GATCATCGCAGCCAGATATCAAGCCCTGCCTCTTTC...GCTTCTGACCCCAAATACATCACTGATCGCCGGTTCCGCCCCTTCCAGTTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
CDS-3UTR TCA 90 bp AGCCCAGCGAAGAGGGGGCTTGCATCGGGACAAAGACTCATCCCTTCTGGGAGAAGTACTCAGCCACCATaGCCAGGTCAAAGACAGAGT +
Preference number: 4 (lower is better)
Translates to: SPAKRGLASGQRLIPSGRSTQPP*PGQRQS
Trigger: ACTCTGTCTTTGACCTGGTCATGGTGGCTGAGTACT...TCTCCCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCCCCCTCTTCGCTGGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000423751.2
CDS-3UTR TCA 90 bp CGAAGAGGGGGCTTGCATCGGGACAAAGACTCATCCCTTCTGGGAGATGCAGAACCTGGGCATTGTGCATaGAGCCCACCACGTCATCTA +
Preference number: 4 (lower is better)
Translates to: RRGGLHRDKDSSLLGDAEPGHCA*SPPRHL
Trigger: TAGATGACGTGGTGGGCTTCATGCACAATGCCCAGG...TTCTGCATCTCCCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCCCCCTCTTCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000423751.2
CDS-3UTR GCA 90 bp GGCTTGCATCGGGACAAAGACTCATCCCTTCTGGGAGATGCAGAAATGGCATCTAGACAGCCGTGCAGCTaGGGAAGGCACTGGTTGGAG +
Preference number: 4 (lower is better)
Translates to: GLHRDKDSSLLGDAEMASRQPCS*GRHWLE
Trigger: CTCCAACCAGTGCCTTCCGCAGCTGCACGGCTGTCT...AGATGCCATTTCTGCATCTCCCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000423751.2
CDS-3UTR GCA 90 bp TGGGAGCCCAGCGAAGAGGGGGCTTGCATCGGGACAAAGACTCATCCCTTCTGGTCCCAAGAGCTGGAGTaGAAAGCCAATGGTCATGAA +
Preference number: 4 (lower is better)
Translates to: WEPSEEGACIGTKTHPFWSQELE*KANGHE
Trigger: TTCATGACCATTGGCTTTGCACTCCAGCTCTTGGGA...CCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCCCCCTCTTCGCTGGGCTCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000423751.2
CDS-3UTR GCA 90 bp GGGCTTGCATCGGGACAAAGACTCATCCCTTCTGGGAGATGCAGAAATGGCATCCCAGCCTGGGCATTGTaGATGAAGCCCACCACGTCA +
Preference number: 4 (lower is better)
Translates to: GLASGQRLIPSGRCRNGIPAWAL*MKPTTS
Trigger: TGACGTGGTGGGCTTCATGCACAATGCCCAGGCTGG...GATGCCATTTCTGCATCTCCCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000423751.2
CDS-3UTR GCA 90 bp GGGCTTGCATCGGGACAAAGACTCATCCCTTCTGGGAGATGCAGAAATGGCATCACAGTGCTGAGGCCCTaGTTATGTCCAGCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: GLASGQRLIPSGRCRNGITVLRP*LCPAWA
Trigger: TGCCCAGGCTGGACATAAGCAGGGCCTCAGCACTGT...GATGCCATTTCTGCATCTCCCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000423751.2
CDS-3UTR GCA 90 bp AGCACTGCTGGGAGCCCAGCGAAGAGGGGGCTTGCATCGGGACAAAGACTCATCGTATTTCTCTATCCGTaGCCAGAGACTGCGGTTGAA +
Preference number: 4 (lower is better)
Translates to: STAGSPAKRGLASGQRLIVFLYP*PETAVE
Trigger: TTCAACCGCAGTCTCTGGGCACGGATAGAGAAATAC...GATGAGTCTTTGTCCCGATGCAAGCCCCCTCTTCGCTGGGCTCCCAGCAGTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000423751.2
CDS-3UTR GCA 90 bp TGGGAGCCCAGCGAAGAGGGGGCTTGCATCGGGACAAAGACTCATCCCTTCTGGATCCCTTCTGGGAGATaGAGAAATGGCATCTTGCTG +
Preference number: 4 (lower is better)
Translates to: WEPSEEGACIGTKTHPFWIPSGR*RNGILL
Trigger: CAGCAAGATGCCATTTCTGCATCTCCCAGAAGGGAT...CCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCCCCCTCTTCGCTGGGCTCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000423751.2
CDS-3UTR GCA 90 bp GGGCTTGCATCGGGACAAAGACTCATCCCTTCTGGGAGATGCAGAAATGGCATCTCGGTGATGTGGATCTaGCTTGGGGCAGGAAAGGGG +
Preference number: 4 (lower is better)
Translates to: GLASGQRLIPSGRCRNGISVMWI*LGAGKG
Trigger: CCCCTTTCCTGCCCCAAGGCAGATCCACATCACCGA...GATGCCATTTCTGCATCTCCCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360039.9
ENST00000413800.5
CDS-3UTR CCA 90 bp CGAAGAGGGGGCTTGCATCGGGACAAAGACTCATCCCTTCTGGGAGATGCAGAAGGCCTGGAAGAGCTTTaGGTAGCCAAACTGGTAGCG +
Preference number: 4 (lower is better)
Translates to: RRGGLHRDKDSSLLGDAEGLEEL*VAKLVA
Trigger: CGCTACCAGTTTGGCTACCCAAAGCTCTTCCAGGCC...TTCTGCATCTCCCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCCCCCTCTTCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360039.9
ENST00000413800.5
CDS-3UTR CCA 90 bp AGAAATGGACGTATCATTCCAACTCACCACGCCCCAAACTTCCTGTGGCTCACTATGTGGAAGGGGAGCTaGGTGCCTCCACCCTGTGGG +
Preference number: 4 (lower is better)
Translates to: RNGRIIPTHHAPNFLWLTMWKGS*VPPPCG
Trigger: CCCACAGGGTGGAGGCACCCAGCTCCCCTTCCACAT...AGTGAGCCACAGGAAGTTTGGGGCGTGGTGAGTTGGAATGATACGTCCATTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360039.9
ENST00000413800.5
CDS-3UTR CCA 90 bp TTTCTCTATCCGTGCCCAGAGACTGCGGTTGAAGTGGACATAGAGAGCCCAGTCGCGAGCCAGAGCCGCTaGGTCTCGGACAATGGAAAA +
Preference number: 4 (lower is better)
Translates to: FLYPCPETAVEVDIESPVASQSR*VSDNGK
Trigger: TTTTCCATTGTCCGAGACCCAGCGGCTCTGGCTCGC...GACTGGGCTCTCTATGTCCACTTCAACCGCAGTCTCTGGGCACGGATAGAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
CDS-3UTR CCA 90 bp GCTAGGCGCTCACATTCCTCTTGGTCTTGGGGGCTCAATCCACTCCGAAGTATAGCGAGCCAGAGCCGCTaGGTCTCGGACAATGGAAAA +
Preference number: 4 (lower is better)
Translates to: ARRSHSSWSWGLNPLRSIASQSR*VSDNGK
Trigger: TTTTCCATTGTCCGAGACCCAGCGGCTCTGGCTCGC...TATACTTCGGAGTGGATTGAGCCCCCAAGACCAAGAGGAATGTGAGCGCCTAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
CDS-3UTR CCA 90 bp GGGCTTGCATCGGGACAAAGACTCATCCCTTCTGGGAGATGCAGAAATGGCATCCTTGGCCCTCTTCTCTaGGGGAAAGGGCAGGCCAAA +
Preference number: 4 (lower is better)
Translates to: GLASGQRLIPSGRCRNGILGPLL*GKGQAK
Trigger: TTTGGCCTGCCCTTTCCCCCAGAGAAGAGGGCCAAG...GATGCCATTTCTGCATCTCCCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000423751.2
CDS-3UTR CCA 90 bp AGAAATGGACGTATCATTCCAACTCACCACGCCCCAAACTTCCTGTGGCTCACTCAAGACCTGCAGCTGTaGGGGGTTGGGGTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: RNGRIIPTHHAPNFLWLTQDLQL*GVGVSG
Trigger: CCCAGAGACCCCAACCCCCCACAGCTGCAGGTCTTG...AGTGAGCCACAGGAAGTTTGGGGCGTGGTGAGTTGGAATGATACGTCCATTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360039.9
ENST00000413800.5
CDS-3UTR CCA 90 bp TGGCTCACTCCATCTTTTGCCCCTCTAGGGAGCTTCGGTGATGTGGATCTGCCTCATGCCAGACCCCACTaGATGAAGGATGAAGACCCC +
Preference number: 4 (lower is better)
Translates to: WLTPSFAPLGSFGDVDLPHARPH*MKDEDP
Trigger: GGGGTCTTCATCCTTCATCCAGTGGGGTCTGGCATG...AGGCAGATCCACATCACCGAAGCTCCCTAGAGGGGCAAAAGATGGAGTGAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360039.9
ENST00000413800.5
CDS-3UTR CCA 90 bp GGGCTTGCATCGGGACAAAGACTCATCCCTTCTGGGAGATGCAGAAATGGCATCGTCTGCAGCCGGCCCTaGCCGTATTTCTCTATCCGT +
Preference number: 4 (lower is better)
Translates to: GLASGQRLIPSGRCRNGIVCSRP*PYFSIR
Trigger: ACGGATAGAGAAATACGGCCAGGGCCGGCTGCAGAC...GATGCCATTTCTGCATCTCCCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000423751.2
CDS-3UTR CCA 90 bp GGGCTTGCATCGGGACAAAGACTCATCCCTTCTGGGAGATGCAGAAATGGCATCGGAGCTTCGGTGATGTaGATCTGCCTTGGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: GLASGQRLIPSGRCRNGIGASVM*ICLGAG
Trigger: TCCTGCCCCAAGGCAGATCCACATCACCGAAGCTCC...GATGCCATTTCTGCATCTCCCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360039.9
ENST00000413800.5
CDS-3UTR CCA 90 bp GGGCTTGCATCGGGACAAAGACTCATCCCTTCTGGGAGATGCAGAAATGGCATCCTGAAGTACCTCCTCTaGAAGGGCCCTCCCAAGAGC +
Preference number: 4 (lower is better)
Translates to: GLASGQRLIPSGRCRNGILKYLL*KGPPKS
Trigger: GCTCTTGGGAGGGCCCTTCCAGAGGAGGTACTTCAG...GATGCCATTTCTGCATCTCCCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423751.2
CDS-3UTR TCA 90 bp AGCCCAGCGAAGAGGGGGCTTGCATCGGGACAAAGACTCATCCCTTCTGGGAGATCAGAAGGCATGACCTaGAGTACCTCTTTCAGGTTG +
Preference number: 4 (lower is better)
Translates to: SPAKRGLASGQRLIPSGRSEGMT*STSFRL
Trigger: CAACCTGAAAGAGGTACTTCAGGTCATGCCTTCTGA...TCTCCCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCCCCCTCTTCGCTGGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360039.9
ENST00000413800.5
CDS-3UTR TCA 90 bp AGCACTGCTGGGAGCCCAGCGAAGAGGGGGCTTGCATCGGGACAAAGACTCATCGATATCTGGCTGCGATaGTCAGTAACAGTGGAAACA +
Preference number: 4 (lower is better)
Translates to: STAGSPAKRGLASGQRLIDIWLR*SVTVET
Trigger: TGTTTCCACTGTTACTGATCATCGCAGCCAGATATC...GATGAGTCTTTGTCCCGATGCAAGCCCCCTCTTCGCTGGGCTCCCAGCAGTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000423751.2
CDS-3UTR TCA 90 bp CCCAAACTGGAAGGGGCGGAACCGGCGATCAGTGATGTATTTGGGGTCAGAAGCAGTACTCAGCCACCATaGCCAGGTCAAAGACAGAGT +
Preference number: 4 (lower is better)
Translates to: PKLEGAEPAISDVFGVRSSTQPP*PGQRQS
Trigger: ACTCTGTCTTTGACCTGGTCATGGTGGCTGAGTACT...GCTTCTGACCCCAAATACATCACTGATCGCCGGTTCCGCCCCTTCCAGTTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
CDS-3UTR TCA 90 bp GGCTTGCATCGGGACAAAGACTCATCCCTTCTGGGAGATGCAGAAATGGCATCTCCCAGAGACTGCGGTTaGAGTGGACATAGAGAGCCC +
Preference number: 4 (lower is better)
Translates to: GLHRDKDSSLLGDAEMASPRDCG*SGHREP
Trigger: GGGCTCTCTATGTCCACTTCAACCGCAGTCTCTGGG...AGATGCCATTTCTGCATCTCCCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000423751.2
CDS-3UTR GCA 90 bp AGAAATGGACGTATCATTCCAACTCACCACGCCCCAAACTTCCTGTGGCTCACTAGACAGCCGTGCAGCTaGGGAAGGCACTGGTTGGAG +
Preference number: 4 (lower is better)
Translates to: RNGRIIPTHHAPNFLWLTRQPCS*GRHWLE
Trigger: CTCCAACCAGTGCCTTCCGCAGCTGCACGGCTGTCT...AGTGAGCCACAGGAAGTTTGGGGCGTGGTGAGTTGGAATGATACGTCCATTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360039.9
ENST00000413800.5
CDS-3UTR GCA 90 bp CGAAGAGGGGGCTTGCATCGGGACAAAGACTCATCCCTTCTGGGAGATGCAGAACCAAAGATGGTGACTTaGGGAAGGCTGATGAGGTGG +
Preference number: 4 (lower is better)
Translates to: RRGGLHRDKDSSLLGDAEPKMVT*GRLMRW
Trigger: CCACCTCATCAGCCTTCCGCAAGTCACCATCTTTGG...TTCTGCATCTCCCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCCCCCTCTTCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000423751.2
CDS-3UTR GCA 90 bp GGGCTTGCATCGGGACAAAGACTCATCCCTTCTGGGAGATGCAGAAATGGCATCGACAGAGTCCAGCCATaGCAGACCCCACTGGATGAA +
Preference number: 4 (lower is better)
Translates to: GLASGQRLIPSGRCRNGIDRVQP*QTPLDE
Trigger: TTCATCCAGTGGGGTCTGGCATGGCTGGACTCTGTC...GATGCCATTTCTGCATCTCCCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000423751.2
CDS-3UTR GCA 90 bp AGCCCAGCGAAGAGGGGGCTTGCATCGGGACAAAGACTCATCCCTTCTGGGAGAGTATTTCTCTATCCGTaGCCAGAGACTGCGGTTGAA +
Preference number: 4 (lower is better)
Translates to: SPAKRGLASGQRLIPSGRVFLYP*PETAVE
Trigger: TTCAACCGCAGTCTCTGGGCACGGATAGAGAAATAC...TCTCCCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCCCCCTCTTCGCTGGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000423751.2
CDS-3UTR CCA 90 bp GGCTTGCATCGGGACAAAGACTCATCCCTTCTGGGAGATGCAGAAATGGCATCTGCCTGCTCACAGTCTTaGTTGAGTCTGCCCCCTGAG +
Preference number: 4 (lower is better)
Translates to: GLHRDKDSSLLGDAEMASACSQS*LSLPPE
Trigger: CTCAGGGGGCAGACTCAACCAAGACTGTGAGCAGGC...AGATGCCATTTCTGCATCTCCCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000423751.2
CDS-3UTR CCA 90 bp ATTCCTCTTGGTCTTGGGGGCTCAATCCACTCCGAAGTATATAGCCCAAAACCTAGGGGCAGAGACAGCTaGAGACAGCCGTGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: IPLGLGGSIHSEVYSPKPRGRDS*RQPCSC
Trigger: GCAGCTGCACGGCTGTCTCCAGCTGTCTCTGCCCCT...AGGTTTTGGGCTATATACTTCGGAGTGGATTGAGCCCCCAAGACCAAGAGGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
CDS-3UTR CCA 90 bp AGAAATGGACGTATCATTCCAACTCACCACGCCCCAAACTTCCTGTGGCTCACTGGTGCCTCCACCCTGTaGGCGGTAGCCTTTTACCCT +
Preference number: 4 (lower is better)
Translates to: RNGRIIPTHHAPNFLWLTGASTL*AVAFYP
Trigger: AGGGTAAAAGGCTACCGCCCACAGGGTGGAGGCACC...AGTGAGCCACAGGAAGTTTGGGGCGTGGTGAGTTGGAATGATACGTCCATTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360039.9
ENST00000413800.5
CDS-3UTR CCA 90 bp GGCTTGCATCGGGACAAAGACTCATCCCTTCTGGGAGATGCAGAAATGGCATCTGCGAGCCAGAGCCGCTaGGTCTCGGACAATGGAAAA +
Preference number: 4 (lower is better)
Translates to: GLHRDKDSSLLGDAEMASASQSR*VSDNGK
Trigger: TTTTCCATTGTCCGAGACCCAGCGGCTCTGGCTCGC...AGATGCCATTTCTGCATCTCCCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000423751.2
CDS-3UTR CCA 90 bp GGGCTTGCATCGGGACAAAGACTCATCCCTTCTGGGAGATGCAGAAATGGCATCAGAAGCCTCGAGGATTaGCCAGGAAGGCAGCCAAAG +
Preference number: 4 (lower is better)
Translates to: GLASGQRLIPSGRCRNGIRSLED*PGRQPK
Trigger: CTTTGGCTGCCTTCCTGGCCAATCCTCGAGGCTTCT...GATGCCATTTCTGCATCTCCCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000423751.2
CDS-3UTR CCA 90 bp TTTCTCTATCCGTGCCCAGAGACTGCGGTTGAAGTGGACATAGAGAGCCCAGTCAGAAGCCTCGAGGATTaGCCAGGAAGGCAGCCAAAG +
Preference number: 4 (lower is better)
Translates to: FLYPCPETAVEVDIESPVRSLED*PGRQPK
Trigger: CTTTGGCTGCCTTCCTGGCCAATCCTCGAGGCTTCT...GACTGGGCTCTCTATGTCCACTTCAACCGCAGTCTCTGGGCACGGATAGAGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
CDS-3UTR CCA 90 bp CGAAGAGGGGGCTTGCATCGGGACAAAGACTCATCCCTTCTGGGAGATGCAGAATGCTTATGTCCAGCCTaGGCATTGTGCATGAAGCCC +
Preference number: 4 (lower is better)
Translates to: RRGGLHRDKDSSLLGDAECLCPA*ALCMKP
Trigger: GGGCTTCATGCACAATGCCCAGGCTGGACATAAGCA...TTCTGCATCTCCCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCCCCCTCTTCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000423751.2
CDS-3UTR CCA 90 bp GGCTTGCATCGGGACAAAGACTCATCCCTTCTGGGAGATGCAGAAATGGCATCTGTCTGCAGCCGGCCCTaGCCGTATTTCTCTATCCGT +
Preference number: 4 (lower is better)
Translates to: GLHRDKDSSLLGDAEMASVCSRP*PYFSIR
Trigger: ACGGATAGAGAAATACGGCCAGGGCCGGCTGCAGAC...AGATGCCATTTCTGCATCTCCCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000423751.2
CDS-3UTR CCA 90 bp TGGCTCACTCCATCTTTTGCCCCTCTAGGGAGCTTCGGTGATGTGGATCTGCCTCGCTCACATTCCTCTTaGTCTTGGGGGCTCAATCCA +
Preference number: 4 (lower is better)
Translates to: WLTPSFAPLGSFGDVDLPRSHSS*SWGLNP
Trigger: TGGATTGAGCCCCCAAGACCAAGAGGAATGTGAGCG...AGGCAGATCCACATCACCGAAGCTCCCTAGAGGGGCAAAAGATGGAGTGAGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360039.9
ENST00000413800.5
CDS-3UTR CCA 90 bp TGCCGGTCCTCCGCAGTCAGTCCACTGTTGCTGACAGTGCTGAGGCCCTGCTTATGTGCCCTTCAAACATaGCTGCTCTTCCACCTAAAT +
Preference number: 4 (lower is better)
Translates to: CRSSAVSPLLLTVLRPCLCALQT*LLFHLN
Trigger: ATTTAGGTGGAAGAGCAGCCATGTTTGAAGGGCACA...TAAGCAGGGCCTCAGCACTGTCAGCAACAGTGGACTGACTGCGGAGGACCGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
CDS-3UTR TCA 90 bp TTGCTGACAGTGCTGAGGCCCTGCTTATGTCCAGCCTGGGCATTGTGCATGAAGTGCCAGCAGAACCAATaGCTCATCGAAGTACTCAGC +
Preference number: 4 (lower is better)
Translates to: LLTVLRPCLCPAWALCMKCQQNQ*LIEVLS
Trigger: GCTGAGTACTTCGATGAGTCATTGGTTCTGCTGGCA...CTTCATGCACAATGCCCAGGCTGGACATAAGCAGGGCCTCAGCACTGTCAGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
CDS-3UTR TCA 90 bp TGGCTCACTCCATCTTTTGCCCCTCTAGGGAGCTTCGGTGATGTGGATCTGCCTTGCCAGCAGAACCAATaGCTCATCGAAGTACTCAGC +
Preference number: 4 (lower is better)
Translates to: WLTPSFAPLGSFGDVDLPCQQNQ*LIEVLS
Trigger: GCTGAGTACTTCGATGAGTCATTGGTTCTGCTGGCA...AGGCAGATCCACATCACCGAAGCTCCCTAGAGGGGCAAAAGATGGAGTGAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360039.9
ENST00000413800.5
CDS-3UTR TCA 90 bp AGAAATGGACGTATCATTCCAACTCACCACGCCCCAAACTTCCTGTGGCTCACTCCCAGAGACTGCGGTTaGAGTGGACATAGAGAGCCC +
Preference number: 4 (lower is better)
Translates to: RNGRIIPTHHAPNFLWLTPRDCG*SGHREP
Trigger: GGGCTCTCTATGTCCACTTCAACCGCAGTCTCTGGG...AGTGAGCCACAGGAAGTTTGGGGCGTGGTGAGTTGGAATGATACGTCCATTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360039.9
ENST00000413800.5
CDS-3UTR TCA 90 bp GGCGCTCACATTCCTCTTGGTCTTGGGGGCTCAATCCACTCCGAAGTATATAGCGGAACCGGCGATCAGTaGTGTATTTGGGGTCAGAAG +
Preference number: 4 (lower is better)
Translates to: GAHIPLGLGGSIHSEVYSGTGDQ*CIWGQK
Trigger: CTTCTGACCCCAAATACATCACTGATCGCCGGTTCC...GCTATATACTTCGGAGTGGATTGAGCCCCCAAGACCAAGAGGAATGTGAGCGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
CDS-3UTR TCA 90 bp AGAAATGGACGTATCATTCCAACTCACCACGCCCCAAACTTCCTGTGGCTCACTGCCCAAAACCTTAGCTaGCCCAAACTGGAAGGGGCG +
Preference number: 4 (lower is better)
Translates to: RNGRIIPTHHAPNFLWLTAQNLS*PKLEGA
Trigger: CGCCCCTTCCAGTTTGGGTCAGCTAAGGTTTTGGGC...AGTGAGCCACAGGAAGTTTGGGGCGTGGTGAGTTGGAATGATACGTCCATTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360039.9
ENST00000413800.5
CDS-3UTR TCA 90 bp AGCCCAGCGAAGAGGGGGCTTGCATCGGGACAAAGACTCATCCCTTCTGGGAGACCTAAATCTGTAGTCTaGTGTTTATGGGGAGAGTGG +
Preference number: 4 (lower is better)
Translates to: SPAKRGLASGQRLIPSGRPKSVV*CLWGEW
Trigger: CCACTCTCCCCATAAACATCAGACTACAGATTTAGG...TCTCCCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCCCCCTCTTCGCTGGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000423751.2
CDS-3UTR TCA 90 bp AGAAATGGACGTATCATTCCAACTCACCACGCCCCAAACTTCCTGTGGCTCACTTCTAGGGAGCTTCGGTaGTGTGGATCTGCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: RNGRIIPTHHAPNFLWLTSRELR*CGSALG
Trigger: CCCCAAGGCAGATCCACATCACCGAAGCTCCCTAGA...AGTGAGCCACAGGAAGTTTGGGGCGTGGTGAGTTGGAATGATACGTCCATTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360039.9
ENST00000413800.5
CDS-3UTR GCA 90 bp CGAAGAGGGGGCTTGCATCGGGACAAAGACTCATCCCTTCTGGGAGATGCAGAAGAGTTAGCAGATTTTTaGCTCTGTCAGCGTCAGGCC +
Preference number: 4 (lower is better)
Translates to: RRGGLHRDKDSSLLGDAEELADF*LCQRQA
Trigger: GGCCTGACGCTGACAGAGGCAAAAATCTGCTAACTC...TTCTGCATCTCCCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCCCCCTCTTCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000360039.9
ENST00000423751.2
CDS-3UTR GCA 90 bp GGGCTTGCATCGGGACAAAGACTCATCCCTTCTGGGAGATGCAGAAATGGCATCGGCTCAGCACAGAGCTaGTCCCGGATTTATGTGTCT +
Preference number: 4 (lower is better)
Translates to: GLASGQRLIPSGRCRNGIGSAQS*SRIYVS
Trigger: AGACACATAAATCCGGGAGCAGCTCTGTGCTGAGCC...GATGCCATTTCTGCATCTCCCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360039.9
ENST00000413800.5
CDS-3UTR GCA 90 bp AGAAATGGACGTATCATTCCAACTCACCACGCCCCAAACTTCCTGTGGCTCACTACAGTGCTGAGGCCCTaGTTATGTCCAGCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: RNGRIIPTHHAPNFLWLTTVLRP*LCPAWA
Trigger: TGCCCAGGCTGGACATAAGCAGGGCCTCAGCACTGT...AGTGAGCCACAGGAAGTTTGGGGCGTGGTGAGTTGGAATGATACGTCCATTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360039.9
ENST00000413800.5
CDS-3UTR GCA 90 bp GGGCTTGCATCGGGACAAAGACTCATCCCTTCTGGGAGATGCAGAAATGGCATCAGCGAAGAGGGGGCTTaGATCGGGACAAAGACTCAT +
Preference number: 4 (lower is better)
Translates to: GLASGQRLIPSGRCRNGISEEGA*IGTKTH
Trigger: ATGAGTCTTTGTCCCGATGCAAGCCCCCTCTTCGCT...GATGCCATTTCTGCATCTCCCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000423751.2
CDS-3UTR GCA 90 bp GGCTTGCATCGGGACAAAGACTCATCCCTTCTGGGAGATGCAGAAATGGCATCTGCTCACTCCATCTTTTaGCCCTCTAGGGAGCTTCGG +
Preference number: 4 (lower is better)
Translates to: GLHRDKDSSLLGDAEMASAHSIF*PSRELR
Trigger: CCGAAGCTCCCTAGAGGGGCAAAAGATGGAGTGAGC...AGATGCCATTTCTGCATCTCCCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360039.9
ENST00000413800.5
CDS-3UTR CCA 90 bp GGCTTGCATCGGGACAAAGACTCATCCCTTCTGGGAGATGCAGAAATGGCATCTGGCCTGGAAGAGCTTTaGGTAGCCAAACTGGTAGCG +
Preference number: 4 (lower is better)
Translates to: GLHRDKDSSLLGDAEMASGLEEL*VAKLVA
Trigger: CGCTACCAGTTTGGCTACCCAAAGCTCTTCCAGGCC...AGATGCCATTTCTGCATCTCCCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360039.9
ENST00000413800.5
CDS-3UTR CCA 90 bp AGAAATGGACGTATCATTCCAACTCACCACGCCCCAAACTTCCTGTGGCTCACTGCGAGCCAGAGCCGCTaGGTCTCGGACAATGGAAAA +
Preference number: 4 (lower is better)
Translates to: RNGRIIPTHHAPNFLWLTASQSR*VSDNGK
Trigger: TTTTCCATTGTCCGAGACCCAGCGGCTCTGGCTCGC...AGTGAGCCACAGGAAGTTTGGGGCGTGGTGAGTTGGAATGATACGTCCATTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360039.9
ENST00000413800.5
CDS-3UTR CCA 90 bp TGGCTCACTCCATCTTTTGCCCCTCTAGGGAGCTTCGGTGATGTGGATCTGCCTGAATATTCCCTCTCTTaGCCCTCTTCTCTGGGGGAA +
Preference number: 4 (lower is better)
Translates to: WLTPSFAPLGSFGDVDLPEYSLS*PSSLGE
Trigger: TTCCCCCAGAGAAGAGGGCCAAGAGAGGGAATATTC...AGGCAGATCCACATCACCGAAGCTCCCTAGAGGGGCAAAAGATGGAGTGAGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360039.9
ENST00000413800.5
CDS-3UTR CCA 90 bp CGAAGAGGGGGCTTGCATCGGGACAAAGACTCATCCCTTCTGGGAGATGCAGAAGAATATTCCCTCTCTTaGCCCTCTTCTCTGGGGGAA +
Preference number: 4 (lower is better)
Translates to: RRGGLHRDKDSSLLGDAEEYSLS*PSSLGE
Trigger: TTCCCCCAGAGAAGAGGGCCAAGAGAGGGAATATTC...TTCTGCATCTCCCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCCCCCTCTTCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000423751.2
CDS-3UTR CCA 90 bp GGCTTGCATCGGGACAAAGACTCATCCCTTCTGGGAGATGCAGAAATGGCATCTCATGCCAGACCCCACTaGATGAAGGATGAAGACCCC +
Preference number: 4 (lower is better)
Translates to: GLHRDKDSSLLGDAEMASHARPH*MKDEDP
Trigger: GGGGTCTTCATCCTTCATCCAGTGGGGTCTGGCATG...AGATGCCATTTCTGCATCTCCCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000423751.2
CDS-3UTR CCA 90 bp GGGCTTGCATCGGGACAAAGACTCATCCCTTCTGGGAGATGCAGAAATGGCATCTGCTTATGTCCAGCCTaGGCATTGTGCATGAAGCCC +
Preference number: 4 (lower is better)
Translates to: GLASGQRLIPSGRCRNGICLCPA*ALCMKP
Trigger: GGGCTTCATGCACAATGCCCAGGCTGGACATAAGCA...GATGCCATTTCTGCATCTCCCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000423751.2
CDS-3UTR CCA 90 bp GGCGCTCACATTCCTCTTGGTCTTGGGGGCTCAATCCACTCCGAAGTATATAGCTGCTTATGTCCAGCCTaGGCATTGTGCATGAAGCCC +
Preference number: 4 (lower is better)
Translates to: GAHIPLGLGGSIHSEVYSCLCPA*ALCMKP
Trigger: GGGCTTCATGCACAATGCCCAGGCTGGACATAAGCA...GCTATATACTTCGGAGTGGATTGAGCCCCCAAGACCAAGAGGAATGTGAGCGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
CDS-3UTR CCA 90 bp GGGCTTGCATCGGGACAAAGACTCATCCCTTCTGGGAGATGCAGAAATGGCATCCATTCCTCTTGGTCTTaGGGGCTCAATCCACTCCGA +
Preference number: 4 (lower is better)
Translates to: GLASGQRLIPSGRCRNGIHSSWS*GLNPLR
Trigger: TCGGAGTGGATTGAGCCCCCAAGACCAAGAGGAATG...GATGCCATTTCTGCATCTCCCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000423751.2
CDS-3UTR CCA 90 bp AGCCCAGCGAAGAGGGGGCTTGCATCGGGACAAAGACTCATCCCTTCTGGGAGAAAGACTCATCCCTTCTaGGAGATGCAGAAATGGCAT +
Preference number: 4 (lower is better)
Translates to: SPAKRGLASGQRLIPSGRKTHPF*EMQKWH
Trigger: ATGCCATTTCTGCATCTCCCAGAAGGGATGAGTCTT...TCTCCCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCCCCCTCTTCGCTGGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000423751.2
CDS-3UTR TCA 90 bp GGGCTTGCATCGGGACAAAGACTCATCCCTTCTGGGAGATGCAGAAATGGCATCGTTGAGTCTGCCCCCTaGGTTAGCAGATTTTTGCCT +
Preference number: 4 (lower is better)
Translates to: GLASGQRLIPSGRCRNGIVESAP*VSRFLP
Trigger: AGGCAAAAATCTGCTAACTCAGGGGGCAGACTCAAC...GATGCCATTTCTGCATCTCCCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000423751.2
CDS-3UTR TCA 90 bp TGGCTCACTCCATCTTTTGCCCCTCTAGGGAGCTTCGGTGATGTGGATCTGCCTGTACCTCTTTCAGGTTaGACCTCATGTGGTGACAGA +
Preference number: 4 (lower is better)
Translates to: WLTPSFAPLGSFGDVDLPVPLSG*TSCGDR
Trigger: TCTGTCACCACATGAGGTTCAACCTGAAAGAGGTAC...AGGCAGATCCACATCACCGAAGCTCCCTAGAGGGGCAAAAGATGGAGTGAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360039.9
ENST00000413800.5
CDS-3UTR TCA 90 bp CGAAGAGGGGGCTTGCATCGGGACAAAGACTCATCCCTTCTGGGAGATGCAGAAAGCTGTCAGAAGGCATaGCCTGAAGTACCTCTTTCA +
Preference number: 4 (lower is better)
Translates to: RRGGLHRDKDSSLLGDAESCQKA*PEVPLS
Trigger: TGAAAGAGGTACTTCAGGTCATGCCTTCTGACAGCT...TTCTGCATCTCCCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCCCCCTCTTCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360039.9
ENST00000413800.5
CDS-3UTR GCA 90 bp TGGCTCACTCCATCTTTTGCCCCTCTAGGGAGCTTCGGTGATGTGGATCTGCCTTCCCAAGAGCTGGAGTaGAAAGCCAATGGTCATGAA +
Preference number: 4 (lower is better)
Translates to: WLTPSFAPLGSFGDVDLPSQELE*KANGHE
Trigger: TTCATGACCATTGGCTTTGCACTCCAGCTCTTGGGA...AGGCAGATCCACATCACCGAAGCTCCCTAGAGGGGCAAAAGATGGAGTGAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360039.9
ENST00000413800.5
CDS-3UTR GCA 90 bp GGCTTGCATCGGGACAAAGACTCATCCCTTCTGGGAGATGCAGAAATGGCATCTCCAAAGATGGTGACTTaGGGAAGGCTGATGAGGTGG +
Preference number: 4 (lower is better)
Translates to: GLHRDKDSSLLGDAEMASPKMVT*GRLMRW
Trigger: CCACCTCATCAGCCTTCCGCAAGTCACCATCTTTGG...AGATGCCATTTCTGCATCTCCCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000423751.2
CDS-3UTR GCA 90 bp GTTGCTGACAGTGCTGAGGCCCTGCTTATGTCCAGCCTGGGCATTGTGCATGAAATCCCTTCTGGGAGATaGAGAAATGGCATCTTGCTG +
Preference number: 4 (lower is better)
Translates to: VADSAEALLMSSLGIVHEIPSGR*RNGILL
Trigger: CAGCAAGATGCCATTTCTGCATCTCCCAGAAGGGAT...TTCATGCACAATGCCCAGGCTGGACATAAGCAGGGCCTCAGCACTGTCAGCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
CDS-3UTR GCA 90 bp GGCTTGCATCGGGACAAAGACTCATCCCTTCTGGGAGATGCAGAAATGGCATCTAGCGAAGAGGGGGCTTaGATCGGGACAAAGACTCAT +
Preference number: 4 (lower is better)
Translates to: GLHRDKDSSLLGDAEMASSEEGA*IGTKTH
Trigger: ATGAGTCTTTGTCCCGATGCAAGCCCCCTCTTCGCT...AGATGCCATTTCTGCATCTCCCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000423751.2
CDS-3UTR CCA 90 bp AGAAATGGACGTATCATTCCAACTCACCACGCCCCAAACTTCCTGTGGCTCACTAGAAGCCTCGAGGATTaGCCAGGAAGGCAGCCAAAG +
Preference number: 4 (lower is better)
Translates to: RNGRIIPTHHAPNFLWLTRSLED*PGRQPK
Trigger: CTTTGGCTGCCTTCCTGGCCAATCCTCGAGGCTTCT...AGTGAGCCACAGGAAGTTTGGGGCGTGGTGAGTTGGAATGATACGTCCATTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360039.9
ENST00000413800.5
CDS-3UTR CCA 90 bp TCAGTGATGTATTTGGGGTCAGAAGCCTCACCCCCTACCAGACAATGTTTCGCTCATGCCAGACCCCACTaGATGAAGGATGAAGACCCC +
Preference number: 4 (lower is better)
Translates to: SVMYLGSEASPPTRQCFAHARPH*MKDEDP
Trigger: GGGGTCTTCATCCTTCATCCAGTGGGGTCTGGCATG...AGCGAAACATTGTCTGGTAGGGGGTGAGGCTTCTGACCCCAAATACATCACTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
CDS-3UTR CCA 90 bp GGCTTGCATCGGGACAAAGACTCATCCCTTCTGGGAGATGCAGAAATGGCATCTCATTCCTCTTGGTCTTaGGGGCTCAATCCACTCCGA +
Preference number: 4 (lower is better)
Translates to: GLHRDKDSSLLGDAEMASHSSWS*GLNPLR
Trigger: TCGGAGTGGATTGAGCCCCCAAGACCAAGAGGAATG...AGATGCCATTTCTGCATCTCCCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000423751.2
CDS-3UTR CCA 90 bp TCCTCCGCAGTCAGTCCACTGTTGCTGACAGTGCTGAGGCCCTGCTTATGTCCATGTGCCCTTCAAACATaGCTGCTCTTCCACCTAAAT +
Preference number: 4 (lower is better)
Translates to: SSAVSPLLLTVLRPCLCPCALQT*LLFHLN
Trigger: ATTTAGGTGGAAGAGCAGCCATGTTTGAAGGGCACA...TGGACATAAGCAGGGCCTCAGCACTGTCAGCAACAGTGGACTGACTGCGGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
CDS-3UTR CCA 90 bp TCCACTGTTGCTGACAGTGCTGAGGCCCTGCTTATGTCCAGCCTGGGCATTGTGAAGACTCATCCCTTCTaGGAGATGCAGAAATGGCAT +
Preference number: 4 (lower is better)
Translates to: STVADSAEALLMSSLGIVKTHPF*EMQKWH
Trigger: ATGCCATTTCTGCATCTCCCAGAAGGGATGAGTCTT...CACAATGCCCAGGCTGGACATAAGCAGGGCCTCAGCACTGTCAGCAACAGTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
CDS-3UTR TCA 90 bp GGCTTGCATCGGGACAAAGACTCATCCCTTCTGGGAGATGCAGAAATGGCATCTGTTGAGTCTGCCCCCTaGGTTAGCAGATTTTTGCCT +
Preference number: 4 (lower is better)
Translates to: GLHRDKDSSLLGDAEMASVESAP*VSRFLP
Trigger: AGGCAAAAATCTGCTAACTCAGGGGGCAGACTCAAC...AGATGCCATTTCTGCATCTCCCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000423751.2
CDS-3UTR TCA 90 bp GGGCTTGCATCGGGACAAAGACTCATCCCTTCTGGGAGATGCAGAAATGGCATCGTACCTCTTTCAGGTTaGACCTCATGTGGTGACAGA +
Preference number: 4 (lower is better)
Translates to: GLASGQRLIPSGRCRNGIVPLSG*TSCGDR
Trigger: TCTGTCACCACATGAGGTTCAACCTGAAAGAGGTAC...GATGCCATTTCTGCATCTCCCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360039.9
ENST00000413800.5
CDS-3UTR TCA 90 bp GGGCTTGCATCGGGACAAAGACTCATCCCTTCTGGGAGATGCAGAAATGGCATCTCAGAAGGCATGACCTaGAGTACCTCTTTCAGGTTG +
Preference number: 4 (lower is better)
Translates to: GLASGQRLIPSGRCRNGISEGMT*STSFRL
Trigger: CAACCTGAAAGAGGTACTTCAGGTCATGCCTTCTGA...GATGCCATTTCTGCATCTCCCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360039.9
ENST00000413800.5
CDS-3UTR TCA 90 bp TGGCTCACTCCATCTTTTGCCCCTCTAGGGAGCTTCGGTGATGTGGATCTGCCTGATATCTGGCTGCGATaGTCAGTAACAGTGGAAACA +
Preference number: 4 (lower is better)
Translates to: WLTPSFAPLGSFGDVDLPDIWLR*SVTVET
Trigger: TGTTTCCACTGTTACTGATCATCGCAGCCAGATATC...AGGCAGATCCACATCACCGAAGCTCCCTAGAGGGGCAAAAGATGGAGTGAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360039.9
ENST00000413800.5
CDS-3UTR TCA 90 bp CGAAGAGGGGGCTTGCATCGGGACAAAGACTCATCCCTTCTGGGAGATGCAGAAGATATCTGGCTGCGATaGTCAGTAACAGTGGAAACA +
Preference number: 4 (lower is better)
Translates to: RRGGLHRDKDSSLLGDAEDIWLR*SVTVET
Trigger: TGTTTCCACTGTTACTGATCATCGCAGCCAGATATC...TTCTGCATCTCCCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCCCCCTCTTCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000423751.2
CDS-3UTR TCA 90 bp AGAAATGGACGTATCATTCCAACTCACCACGCCCCAAACTTCCTGTGGCTCACTGAAAGAGGCAGGGCTTaGTATCTGGCTGCGATGATC +
Preference number: 4 (lower is better)
Translates to: RNGRIIPTHHAPNFLWLTERGRA*YLAAMI
Trigger: GATCATCGCAGCCAGATATCAAGCCCTGCCTCTTTC...AGTGAGCCACAGGAAGTTTGGGGCGTGGTGAGTTGGAATGATACGTCCATTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360039.9
ENST00000413800.5
CDS-3UTR TCA 90 bp GGCTTGCATCGGGACAAAGACTCATCCCTTCTGGGAGATGCAGAAATGGCATCTTGCCAGCAGAACCAATaGCTCATCGAAGTACTCAGC +
Preference number: 4 (lower is better)
Translates to: GLHRDKDSSLLGDAEMASCQQNQ*LIEVLS
Trigger: GCTGAGTACTTCGATGAGTCATTGGTTCTGCTGGCA...AGATGCCATTTCTGCATCTCCCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000423751.2
CDS-3UTR GCA 90 bp GGCTTGCATCGGGACAAAGACTCATCCCTTCTGGGAGATGCAGAAATGGCATCTCAAACCATAGTAAGTTaGGAGCGTAGTGGTCCCCAC +
Preference number: 4 (lower is better)
Translates to: GLHRDKDSSLLGDAEMASQTIVS*ERSGPH
Trigger: GTGGGGACCACTACGCTCGCAACTTACTATGGTTTG...AGATGCCATTTCTGCATCTCCCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000423751.2
CDS-3UTR GCA 90 bp ATTCCTCTTGGTCTTGGGGGCTCAATCCACTCCGAAGTATATAGCCCAAAACCTGACAGAGTCCAGCCATaGCAGACCCCACTGGATGAA +
Preference number: 4 (lower is better)
Translates to: IPLGLGGSIHSEVYSPKPDRVQP*QTPLDE
Trigger: TTCATCCAGTGGGGTCTGGCATGGCTGGACTCTGTC...AGGTTTTGGGCTATATACTTCGGAGTGGATTGAGCCCCCAAGACCAAGAGGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
CDS-3UTR GCA 90 bp GGCTTGCATCGGGACAAAGACTCATCCCTTCTGGGAGATGCAGAAATGGCATCTCCCACTCATCACATGTaGCCTTCAAACATGGCTGCT +
Preference number: 4 (lower is better)
Translates to: GLHRDKDSSLLGDAEMASPTHHM*PSNMAA
Trigger: AGCAGCCATGTTTGAAGGGCACATGTGATGAGTGGG...AGATGCCATTTCTGCATCTCCCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000423751.2
CDS-3UTR GCA 90 bp GGCTTGCATCGGGACAAAGACTCATCCCTTCTGGGAGATGCAGAAATGGCATCTGAAATGGCATCTTGCTaGCCCCCACTCATCACATGT +
Preference number: 4 (lower is better)
Translates to: GLHRDKDSSLLGDAEMASEMASC*PPLITC
Trigger: ACATGTGATGAGTGGGGGGCAGCAAGATGCCATTTC...AGATGCCATTTCTGCATCTCCCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000423751.2
CDS-3UTR CCA 90 bp GAACCGGCGATCAGTGATGTATTTGGGGTCAGAAGCCTCACCCCCTACCAGACAGGAAGGCTGATGAGGTaGATTTATAGTAGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: EPAISDVFGVRSLTPYQTGRLMR*IYSRRR
Trigger: CCTTCTCCTACTATAAATCCACCTCATCAGCCTTCC...TGTCTGGTAGGGGGTGAGGCTTCTGACCCCAAATACATCACTGATCGCCGGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
CDS-3UTR CCA 90 bp TGGCTCACTCCATCTTTTGCCCCTCTAGGGAGCTTCGGTGATGTGGATCTGCCTGGAAGGCTGATGAGGTaGATTTATAGTAGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: WLTPSFAPLGSFGDVDLPGRLMR*IYSRRR
Trigger: CCTTCTCCTACTATAAATCCACCTCATCAGCCTTCC...AGGCAGATCCACATCACCGAAGCTCCCTAGAGGGGCAAAAGATGGAGTGAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360039.9
ENST00000413800.5
CDS-3UTR CCA 90 bp AGAAATGGACGTATCATTCCAACTCACCACGCCCCAAACTTCCTGTGGCTCACTAGCTTGTCCTTGTACTaGAGCTCAGGGGTAGCTAGG +
Preference number: 4 (lower is better)
Translates to: RNGRIIPTHHAPNFLWLTSLSLY*SSGVAR
Trigger: CCTAGCTACCCCTGAGCTCCAGTACAAGGACAAGCT...AGTGAGCCACAGGAAGTTTGGGGCGTGGTGAGTTGGAATGATACGTCCATTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360039.9
ENST00000413800.5
CDS-3UTR CCA 90 bp TGGCTCACTCCATCTTTTGCCCCTCTAGGGAGCTTCGGTGATGTGGATCTGCCTAAGACTCATCCCTTCTaGGAGATGCAGAAATGGCAT +
Preference number: 4 (lower is better)
Translates to: WLTPSFAPLGSFGDVDLPKTHPF*EMQKWH
Trigger: ATGCCATTTCTGCATCTCCCAGAAGGGATGAGTCTT...AGGCAGATCCACATCACCGAAGCTCCCTAGAGGGGCAAAAGATGGAGTGAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360039.9
ENST00000413800.5
CDS-3UTR TCA 90 bp GGCGCTCACATTCCTCTTGGTCTTGGGGGCTCAATCCACTCCGAAGTATATAGCGATATCTGGCTGCGATaGTCAGTAACAGTGGAAACA +
Preference number: 4 (lower is better)
Translates to: GAHIPLGLGGSIHSEVYSDIWLR*SVTVET
Trigger: TGTTTCCACTGTTACTGATCATCGCAGCCAGATATC...GCTATATACTTCGGAGTGGATTGAGCCCCCAAGACCAAGAGGAATGTGAGCGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
CDS-3UTR TCA 90 bp AGAAATGGACGTATCATTCCAACTCACCACGCCCCAAACTTCCTGTGGCTCACTAGTACTCAGCCACCATaGCCAGGTCAAAGACAGAGT +
Preference number: 4 (lower is better)
Translates to: RNGRIIPTHHAPNFLWLTSTQPP*PGQRQS
Trigger: ACTCTGTCTTTGACCTGGTCATGGTGGCTGAGTACT...AGTGAGCCACAGGAAGTTTGGGGCGTGGTGAGTTGGAATGATACGTCCATTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360039.9
ENST00000413800.5
CDS-3UTR GCA 90 bp GGCTTGCATCGGGACAAAGACTCATCCCTTCTGGGAGATGCAGAAATGGCATCTTCCCAAGAGCTGGAGTaGAAAGCCAATGGTCATGAA +
Preference number: 4 (lower is better)
Translates to: GLHRDKDSSLLGDAEMASSQELE*KANGHE
Trigger: TTCATGACCATTGGCTTTGCACTCCAGCTCTTGGGA...AGATGCCATTTCTGCATCTCCCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000423751.2
CDS-3UTR GCA 90 bp AGAAATGGACGTATCATTCCAACTCACCACGCCCCAAACTTCCTGTGGCTCACTCAAACCATAGTAAGTTaGGAGCGTAGTGGTCCCCAC +
Preference number: 4 (lower is better)
Translates to: RNGRIIPTHHAPNFLWLTQTIVS*ERSGPH
Trigger: GTGGGGACCACTACGCTCGCAACTTACTATGGTTTG...AGTGAGCCACAGGAAGTTTGGGGCGTGGTGAGTTGGAATGATACGTCCATTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360039.9
ENST00000413800.5
CDS-3UTR CCA 90 bp GGGCTTGCATCGGGACAAAGACTCATCCCTTCTGGGAGATGCAGAAATGGCATCGGAAGGCTGATGAGGTaGATTTATAGTAGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: GLASGQRLIPSGRCRNGIGRLMR*IYSRRR
Trigger: CCTTCTCCTACTATAAATCCACCTCATCAGCCTTCC...GATGCCATTTCTGCATCTCCCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000423751.2
CDS-3UTR CCA 90 bp ATTCCTCTTGGTCTTGGGGGCTCAATCCACTCCGAAGTATATAGCCCAAAACCTCATTCCTCTTGGTCTTaGGGGCTCAATCCACTCCGA +
Preference number: 4 (lower is better)
Translates to: IPLGLGGSIHSEVYSPKPHSSWS*GLNPLR
Trigger: TCGGAGTGGATTGAGCCCCCAAGACCAAGAGGAATG...AGGTTTTGGGCTATATACTTCGGAGTGGATTGAGCCCCCAAGACCAAGAGGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
CDS-3UTR CCA 90 bp GGGCTTGCATCGGGACAAAGACTCATCCCTTCTGGGAGATGCAGAAATGGCATCTGTGCCCTTCAAACATaGCTGCTCTTCCACCTAAAT +
Preference number: 4 (lower is better)
Translates to: GLASGQRLIPSGRCRNGICALQT*LLFHLN
Trigger: ATTTAGGTGGAAGAGCAGCCATGTTTGAAGGGCACA...GATGCCATTTCTGCATCTCCCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000423751.2
CDS-3UTR TCA 90 bp AGAAATGGACGTATCATTCCAACTCACCACGCCCCAAACTTCCTGTGGCTCACTAGCTGTCAGAAGGCATaGCCTGAAGTACCTCTTTCA +
Preference number: 4 (lower is better)
Translates to: RNGRIIPTHHAPNFLWLTSCQKA*PEVPLS
Trigger: TGAAAGAGGTACTTCAGGTCATGCCTTCTGACAGCT...AGTGAGCCACAGGAAGTTTGGGGCGTGGTGAGTTGGAATGATACGTCCATTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360039.9
ENST00000413800.5
CDS-3UTR TCA 90 bp AGAAATGGACGTATCATTCCAACTCACCACGCCCCAAACTTCCTGTGGCTCACTCCTAAATCTGTAGTCTaGTGTTTATGGGGAGAGTGG +
Preference number: 4 (lower is better)
Translates to: RNGRIIPTHHAPNFLWLTPKSVV*CLWGEW
Trigger: CCACTCTCCCCATAAACATCAGACTACAGATTTAGG...AGTGAGCCACAGGAAGTTTGGGGCGTGGTGAGTTGGAATGATACGTCCATTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360039.9
ENST00000413800.5
CDS-3UTR CCA 90 bp AGAAATGGACGTATCATTCCAACTCACCACGCCCCAAACTTCCTGTGGCTCACTTGTGCCCTTCAAACATaGCTGCTCTTCCACCTAAAT +
Preference number: 4 (lower is better)
Translates to: RNGRIIPTHHAPNFLWLTCALQT*LLFHLN
Trigger: ATTTAGGTGGAAGAGCAGCCATGTTTGAAGGGCACA...AGTGAGCCACAGGAAGTTTGGGGCGTGGTGAGTTGGAATGATACGTCCATTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360039.9
ENST00000413800.5
CDS-3UTR CAA 90 bp GGCTCGGGCCCGTGCAGTCAGCTGCCGGTCCTCCGCAGTCAGTCCACTGTTGCTATTGGGATTGAGGGTTaGGGCTCGAGGGCCAGCACC +
Preference number: 5 (lower is better)
Translates to: GSGPCSQLPVLRSQSTVAIGIEG*GSRAST
Trigger: GGTGCTGGCCCTCGAGCCCAAACCCTCAATCCCAAT...AGCAACAGTGGACTGACTGCGGAGGACCGGCAGCTGACTGCACGGGCCCGAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
CDS GCA 90 bp ACAGAGCTGCTCCCGGATTTATGTGTCTTCAGGAACACCAGTCGCTaGCGGGGTGGGCAGGACGGAAGGGCTGGTCGTAGGGATGGGGCC +
Preference number: 5 (lower is better)
Translates to: TELLPDLCVFRNTSR*RGGQDGRAGRRDGA
Trigger: GGCCCCATCCCTACGACCAGCCCTTCCGTCCTGCCCACCCCGGCAGCGACTGGTGTTCCTGAAGACACATAAATCCGGGAGCAGCTCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000460995.2
ENST00000482469.5
ENST00000495882.1
CDS CCA 90 bp ACCCTGTGGGCGGTAGCCTTTTACCCTAGAGGCCTGGAAGAGCTTTaGGTAGCCAAACTGGTAGCGGGCAGGGAGGGCGAAGCGCAGCCC +
Preference number: 5 (lower is better)
Translates to: TLWAVAFYPRGLEEL*VAKLVAGREGEAQP
Trigger: GGGCTGCGCTTCGCCCTCCCTGCCCGCTACCAGTTTGGCTACCCAAAGCTCTTCCAGGCCTCTAGGGTAAAAGGCTACCGCCCACAGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000482469.5
ENST00000495882.1
CDS-3UTR CAA 90 bp GACAATGTTTCGCTAGGGCCTCTCGGCGAGCCCGGAGCTCGGCCACAGCTGTCTATTGGGATTGAGGGTTaGGGCTCGAGGGCCAGCACC +
Preference number: 5 (lower is better)
Translates to: DNVSLGPLGEPGARPQLSIGIEG*GSRAST
Trigger: GGTGCTGGCCCTCGAGCCCAAACCCTCAATCCCAAT...AGACAGCTGTGGCCGAGCTCCGGGCTCGCCGAGAGGCCCTAGCGAAACATTGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
CDS-3UTR CAA 90 bp TGGGAGCCCAGCGAAGAGGGGGCTTGCATCGGGACAAAGACTCATCCCTTCTGGAGAGCCCAGTCCAGGTaGTTCCAGGCTCGGGCCCGT +
Preference number: 5 (lower is better)
Translates to: WEPSEEGACIGTKTHPFWRAQSR*FQARAR
Trigger: ACGGGCCCGAGCCTGGAACAACCTGGACTGGGCTCT...CCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCCCCCTCTTCGCTGGGCTCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000423751.2
CDS-3UTR CAA 90 bp AGAGAGCCCAGTCCAGGTTGTTCCAGGCTCGGGCCCGTGCAGTCAGCTGCCGGTCAGCGAAGAGGGGGCTaGCATCGGGACAAAGACTCA +
Preference number: 5 (lower is better)
Translates to: REPSPGCSRLGPVQSAAGQRRGG*HRDKDS
Trigger: TGAGTCTTTGTCCCGATGCAAGCCCCCTCTTCGCTG...ACCGGCAGCTGACTGCACGGGCCCGAGCCTGGAACAACCTGGACTGGGCTCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423751.2
CDS GCA 90 bp GCCCGTGCTGGTCCCCATAGCGGTGAAGCAGGCTCAGCACAGAGCTaGTCCCGGATTTATGTGTCTTCAGGAACACCAGTCGCTGCCGGG +
Preference number: 5 (lower is better)
Translates to: ARAGPHSGEAGSAQS*SRIYVSSGTPVAAG
Trigger: CCCGGCAGCGACTGGTGTTCCTGAAGACACATAAATCCGGGAGCAGCTCTGTGCTGAGCCTGCTTCACCGCTATGGGGACCAGCACGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000460995.2
ENST00000482469.5
ENST00000495882.1
CDS CCA 90 bp CGTAGTGGTCCCCACGGGCCCCAGGCCTGTAGAAGCCTCGAGGATTaGCCAGGAAGGCAGCCAAAGATGGTGACTTGCGGAAGGCTGATG +
Preference number: 5 (lower is better)
Translates to: RSGPHGPQACRSLED*PGRQPKMVTCGRLM
Trigger: CATCAGCCTTCCGCAAGTCACCATCTTTGGCTGCCTTCCTGGCCAATCCTCGAGGCTTCTACAGGCCTGGGGCCCGTGGGGACCACTACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360039.9
ENST00000411994.1
ENST00000413800.5
ENST00000423751.2
ENST00000495882.1
ENST00000498000.5
CDS-3UTR CAA 90 bp TCACCCCCTACCAGACAATGTTTCGCTAGGGCCTCTCGGCGAGCCCGGAGCTCGATGAGGGCATTGGGATaGAGGGTTTGGGCTCGAGGG +
Preference number: 5 (lower is better)
Translates to: SPPTRQCFARASRRARSSMRALG*RVWARG
Trigger: CCCTCGAGCCCAAACCCTCAATCCCAATGCCCTCAT...CGAGCTCCGGGCTCGCCGAGAGGCCCTAGCGAAACATTGTCTGGTAGGGGGTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
CDS-3UTR CAA 90 bp CAGGCTCGGGCCCGTGCAGTCAGCTGCCGGTCCTCCGCAGTCAGTCCACTGTTGCGAAAGAGGCAGGGCTaGATATCTGGCTGCGATGAT +
Preference number: 5 (lower is better)
Translates to: QARARAVSCRSSAVSPLLRKRQG*ISGCDD
Trigger: ATCATCGCAGCCAGATATCAAGCCCTGCCTCTTTCG...CAACAGTGGACTGACTGCGGAGGACCGGCAGCTGACTGCACGGGCCCGAGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
CDS-3UTR CAA 90 bp AGCACTGCTGGGAGCCCAGCGAAGAGGGGGCTTGCATCGGGACAAAGACTCATCATTGGGATTGAGGGTTaGGGCTCGAGGGCCAGCACC +
Preference number: 5 (lower is better)
Translates to: STAGSPAKRGLASGQRLIIGIEG*GSRAST
Trigger: GGTGCTGGCCCTCGAGCCCAAACCCTCAATCCCAAT...GATGAGTCTTTGTCCCGATGCAAGCCCCCTCTTCGCTGGGCTCCCAGCAGTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000423751.2
CDS-3UTR CAA 90 bp AGCACTGCTGGGAGCCCAGCGAAGAGGGGGCTTGCATCGGGACAAAGACTCATCGCAGTCAGTCCACTGTaGCTGACAGTGCTGAGGCCC +
Preference number: 5 (lower is better)
Translates to: STAGSPAKRGLASGQRLIAVSPL*LTVLRP
Trigger: GGGCCTCAGCACTGTCAGCAACAGTGGACTGACTGC...GATGAGTCTTTGTCCCGATGCAAGCCCCCTCTTCGCTGGGCTCCCAGCAGTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000423751.2
CDS-3UTR CAA 90 bp TCCACTGTTGCTGACAGTGCTGAGGCCCTGCTTATGTCCAGCCTGGGCATTGTGAGAGCCCAGTCCAGGTaGTTCCAGGCTCGGGCCCGT +
Preference number: 5 (lower is better)
Translates to: STVADSAEALLMSSLGIVRAQSR*FQARAR
Trigger: ACGGGCCCGAGCCTGGAACAACCTGGACTGGGCTCT...CACAATGCCCAGGCTGGACATAAGCAGGGCCTCAGCACTGTCAGCAACAGTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
CDS-3UTR CAA 90 bp CGGGCCCGTGCAGTCAGCTGCCGGTCCTCCGCAGTCAGTCCACTGTTGCTGACACGATCAGTGATGTATTaGGGGTCAGAAGCCTCACCC +
Preference number: 5 (lower is better)
Translates to: RARAVSCRSSAVSPLLLTRSVMY*GSEASP
Trigger: GGGTGAGGCTTCTGACCCCAAATACATCACTGATCG...TGTCAGCAACAGTGGACTGACTGCGGAGGACCGGCAGCTGACTGCACGGGCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
CDS CCA 90 bp GTGGTGACAGAGGATGTGGAAGGGGAGCTGGGTGCCTCCACCCTGTaGGCGGTAGCCTTTTACCCTAGAGGCCTGGAAGAGCTTTGGGTA +
Preference number: 5 (lower is better)
Translates to: VVTEDVEGELGASTL*AVAFYPRGLEELWV
Trigger: TACCCAAAGCTCTTCCAGGCCTCTAGGGTAAAAGGCTACCGCCCACAGGGTGGAGGCACCCAGCTCCCCTTCCACATCCTCTGTCACCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000495882.1
CDS-3UTR CAA 90 bp CTGAGGCCCTGCTTATGTCCAGCCTGGGCATTGTGCATGAAGCCCACCACGTCAGCAGTCAGTCCACTGTaGCTGACAGTGCTGAGGCCC +
Preference number: 5 (lower is better)
Translates to: LRPCLCPAWALCMKPTTSAVSPL*LTVLRP
Trigger: GGGCCTCAGCACTGTCAGCAACAGTGGACTGACTGC...TGACGTGGTGGGCTTCATGCACAATGCCCAGGCTGGACATAAGCAGGGCCTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
CDS-3UTR CAA 90 bp TTGCTGACAGTGCTGAGGCCCTGCTTATGTCCAGCCTGGGCATTGTGCATGAAGAGAGCCCAGTCCAGGTaGTTCCAGGCTCGGGCCCGT +
Preference number: 5 (lower is better)
Translates to: LLTVLRPCLCPAWALCMKRAQSR*FQARAR
Trigger: ACGGGCCCGAGCCTGGAACAACCTGGACTGGGCTCT...CTTCATGCACAATGCCCAGGCTGGACATAAGCAGGGCCTCAGCACTGTCAGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
CDS-3UTR CAA 90 bp TGGGAGCCCAGCGAAGAGGGGGCTTGCATCGGGACAAAGACTCATCCCTTCTGGGCGCTCACATTCCTCTaGGTCTTGGGGGCTCAATCC +
Preference number: 5 (lower is better)
Translates to: WEPSEEGACIGTKTHPFWALTFL*VLGAQS
Trigger: GGATTGAGCCCCCAAGACCAAGAGGAATGTGAGCGC...CCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCCCCCTCTTCGCTGGGCTCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000423751.2
CDS-3UTR CAA 90 bp CGTGCAGTCAGCTGCCGGTCCTCCGCAGTCAGTCCACTGTTGCTGACAGTGCTGAGTGGCCTTGAAGTCTaGAGGGGCAGTGAGACGGTA +
Preference number: 5 (lower is better)
Translates to: RAVSCRSSAVSPLLLTVLSGLEV*RGSETV
Trigger: TACCGTCTCACTGCCCCTCAAGACTTCAAGGCCACT...CAGCACTGTCAGCAACAGTGGACTGACTGCGGAGGACCGGCAGCTGACTGCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
CDS CCA 90 bp CAGGTCAGACCATGGTCGGGAACCTGGTTTCCTCCAGAGCCCCTCTaGCTGTCACAGATGGGGATAAAGAGCCCTATCCCAGGACCAGGA +
Preference number: 5 (lower is better)
Translates to: QVRPWSGTWFPPEPL*LSQMGIKSPIPGPG
Trigger: TCCTGGTCCTGGGATAGGGCTCTTTATCCCCATCTGTGACAGCCAGAGGGGCTCTGGAGGAAACCAGGTTCCCGACCATGGTCTGACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495882.1
CDS CCA 90 bp TCTCTCCTGCTGCAGCTGAGACCTCCTTCAGGGAAGGGGAGTGGCTaGGGATGTTGTCTATACCCAGACTCTCCTAGGTGGCCCCACAAC +
Preference number: 5 (lower is better)
Translates to: SLLLQLRPPSGKGSG*GCCLYPDSPRWPHN
Trigger: GTTGTGGGGCCACCTAGGAGAGTCTGGGTATAGACAACATCCCCAGCCACTCCCCTTCCCTGAAGGAGGTCTCAGCTGCAGCAGGAGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495882.1
CDS-3UTR CAA 90 bp TGCCGGTCCTCCGCAGTCAGTCCACTGTTGCTGACAGTGCTGAGGCCCTGCTTAGCCAAAGATGGTGACTaGCGGAAGGCTGATGAGGTG +
Preference number: 5 (lower is better)
Translates to: CRSSAVSPLLLTVLRPCLAKDGD*RKADEV
Trigger: CACCTCATCAGCCTTCCGCAAGTCACCATCTTTGGC...TAAGCAGGGCCTCAGCACTGTCAGCAACAGTGGACTGACTGCGGAGGACCGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
CDS-3UTR CAA 90 bp CCCAAACTGGAAGGGGCGGAACCGGCGATCAGTGATGTATTTGGGGTCAGAAGCGCAGTCAGTCCACTGTaGCTGACAGTGCTGAGGCCC +
Preference number: 5 (lower is better)
Translates to: PKLEGAEPAISDVFGVRSAVSPL*LTVLRP
Trigger: GGGCCTCAGCACTGTCAGCAACAGTGGACTGACTGC...GCTTCTGACCCCAAATACATCACTGATCGCCGGTTCCGCCCCTTCCAGTTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
CDS CCA 90 bp AGTCCACTGTTGCTGACAGTGCTGAGGCCCTGCTTATGTCCAGCCTaGGCATTGTGCATGAAGCCCACCACGTCATCTAGACCCCAGCAC +
Preference number: 5 (lower is better)
Translates to: SPLLLTVLRPCLCPA*ALCMKPTTSSRPQH
Trigger: GTGCTGGGGTCTAGATGACGTGGTGGGCTTCATGCACAATGCCCAGGCTGGACATAAGCAGGGCCTCAGCACTGTCAGCAACAGTGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360039.9
ENST00000411994.1
ENST00000413800.5
ENST00000423751.2
ENST00000495882.1
CDS-3UTR CAA 90 bp AGCCCAGCGAAGAGGGGGCTTGCATCGGGACAAAGACTCATCCCTTCTGGGAGAAGGCCTGGAAGAGCTTaGGGTAGCCAAACTGGTAGC +
Preference number: 5 (lower is better)
Translates to: SPAKRGLASGQRLIPSGRRPGRA*GSQTGS
Trigger: GCTACCAGTTTGGCTACCCAAAGCTCTTCCAGGCCT...TCTCCCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCCCCCTCTTCGCTGGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360039.9
ENST00000413800.5
CDS-3UTR CAA 90 bp TGGCTCACTCCATCTTTTGCCCCTCTAGGGAGCTTCGGTGATGTGGATCTGCCTATTGGGATTGAGGGTTaGGGCTCGAGGGCCAGCACC +
Preference number: 5 (lower is better)
Translates to: WLTPSFAPLGSFGDVDLPIGIEG*GSRAST
Trigger: GGTGCTGGCCCTCGAGCCCAAACCCTCAATCCCAAT...AGGCAGATCCACATCACCGAAGCTCCCTAGAGGGGCAAAAGATGGAGTGAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360039.9
ENST00000413800.5
CDS-3UTR CAA 90 bp TGGGAGCCCAGCGAAGAGGGGGCTTGCATCGGGACAAAGACTCATCCCTTCTGGCGAAAGAGGCAGGGCTaGATATCTGGCTGCGATGAT +
Preference number: 5 (lower is better)
Translates to: WEPSEEGACIGTKTHPFWRKRQG*ISGCDD
Trigger: ATCATCGCAGCCAGATATCAAGCCCTGCCTCTTTCG...CCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCCCCCTCTTCGCTGGGCTCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000423751.2
CDS-3UTR CAA 90 bp AGCCCAGCGAAGAGGGGGCTTGCATCGGGACAAAGACTCATCCCTTCTGGGAGAAGTGGCCTTGAAGTCTaGAGGGGCAGTGAGACGGTA +
Preference number: 5 (lower is better)
Translates to: SPAKRGLASGQRLIPSGRSGLEV*RGSETV
Trigger: TACCGTCTCACTGCCCCTCAAGACTTCAAGGCCACT...TCTCCCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCCCCCTCTTCGCTGGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000423751.2
CDS CCA 90 bp CCAGGAAGGCAGCCAAAGATGGTGACTTGCGGAAGGCTGATGAGGTaGATTTATAGTAGGAGAAGGCAGAGCGAGCCAGAGCCGCTGGGT +
Preference number: 5 (lower is better)
Translates to: PGRQPKMVTCGRLMR*IYSRRRQSEPEPLG
Trigger: ACCCAGCGGCTCTGGCTCGCTCTGCCTTCTCCTACTATAAATCCACCTCATCAGCCTTCCGCAAGTCACCATCTTTGGCTGCCTTCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360039.9
ENST00000411994.1
ENST00000413800.5
ENST00000423751.2
ENST00000495882.1
ENST00000498000.5
CDS-3UTR CAA 90 bp CGAAGAGGGGGCTTGCATCGGGACAAAGACTCATCCCTTCTGGGAGATGCAGAAATGAGGGCATTGGGATaGAGGGTTTGGGCTCGAGGG +
Preference number: 5 (lower is better)
Translates to: RRGGLHRDKDSSLLGDAEMRALG*RVWARG
Trigger: CCCTCGAGCCCAAACCCTCAATCCCAATGCCCTCAT...TTCTGCATCTCCCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCCCCCTCTTCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000423751.2
CDS-3UTR CAA 90 bp AGAAATGGACGTATCATTCCAACTCACCACGCCCCAAACTTCCTGTGGCTCACTAGAGCCCAGTCCAGGTaGTTCCAGGCTCGGGCCCGT +
Preference number: 5 (lower is better)
Translates to: RNGRIIPTHHAPNFLWLTRAQSR*FQARAR
Trigger: ACGGGCCCGAGCCTGGAACAACCTGGACTGGGCTCT...AGTGAGCCACAGGAAGTTTGGGGCGTGGTGAGTTGGAATGATACGTCCATTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360039.9
ENST00000413800.5
CDS-3UTR CAA 90 bp TCCACTGTTGCTGACAGTGCTGAGGCCCTGCTTATGTCCAGCCTGGGCATTGTGACATTCCTCTTGGTCTaGGGGGCTCAATCCACTCCG +
Preference number: 5 (lower is better)
Translates to: STVADSAEALLMSSLGIVTFLLV*GAQSTP
Trigger: CGGAGTGGATTGAGCCCCCAAGACCAAGAGGAATGT...CACAATGCCCAGGCTGGACATAAGCAGGGCCTCAGCACTGTCAGCAACAGTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
CDS-3UTR CAA 90 bp CTGAGGCCCTGCTTATGTCCAGCCTGGGCATTGTGCATGAAGCCCACCACGTCATGCTTGGCATCCAGCTaGTCCTTGTACTGGAGCTCA +
Preference number: 5 (lower is better)
Translates to: LRPCLCPAWALCMKPTTSCLASS*SLYWSS
Trigger: TGAGCTCCAGTACAAGGACAAGCTGGATGCCAAGCA...TGACGTGGTGGGCTTCATGCACAATGCCCAGGCTGGACATAAGCAGGGCCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
CDS-3UTR CAA 90 bp CGAAGAGGGGGCTTGCATCGGGACAAAGACTCATCCCTTCTGGGAGATGCAGAAGCCAAAGATGGTGACTaGCGGAAGGCTGATGAGGTG +
Preference number: 5 (lower is better)
Translates to: RRGGLHRDKDSSLLGDAEAKDGD*RKADEV
Trigger: CACCTCATCAGCCTTCCGCAAGTCACCATCTTTGGC...TTCTGCATCTCCCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCCCCCTCTTCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000423751.2
CDS-3UTR CAA 90 bp GTTGCTGACAGTGCTGAGGCCCTGCTTATGTCCAGCCTGGGCATTGTGCATGAAGCCAAAGATGGTGACTaGCGGAAGGCTGATGAGGTG +
Preference number: 5 (lower is better)
Translates to: VADSAEALLMSSLGIVHEAKDGD*RKADEV
Trigger: CACCTCATCAGCCTTCCGCAAGTCACCATCTTTGGC...TTCATGCACAATGCCCAGGCTGGACATAAGCAGGGCCTCAGCACTGTCAGCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
CDS-3UTR CAA 90 bp GGGCTTGCATCGGGACAAAGACTCATCCCTTCTGGGAGATGCAGAAATGGCATCATGAGGGCATTGGGATaGAGGGTTTGGGCTCGAGGG +
Preference number: 5 (lower is better)
Translates to: GLASGQRLIPSGRCRNGIMRALG*RVWARG
Trigger: CCCTCGAGCCCAAACCCTCAATCCCAATGCCCTCAT...GATGCCATTTCTGCATCTCCCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000423751.2
CDS-3UTR CAA 90 bp GGCTTGCATCGGGACAAAGACTCATCCCTTCTGGGAGATGCAGAAATGGCATCTGCAGTCAGTCCACTGTaGCTGACAGTGCTGAGGCCC +
Preference number: 5 (lower is better)
Translates to: GLHRDKDSSLLGDAEMASAVSPL*LTVLRP
Trigger: GGGCCTCAGCACTGTCAGCAACAGTGGACTGACTGC...AGATGCCATTTCTGCATCTCCCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000423751.2
CDS-3UTR CAA 90 bp GGGCTTGCATCGGGACAAAGACTCATCCCTTCTGGGAGATGCAGAAATGGCATCGCGCTCACATTCCTCTaGGTCTTGGGGGCTCAATCC +
Preference number: 5 (lower is better)
Translates to: GLASGQRLIPSGRCRNGIALTFL*VLGAQS
Trigger: GGATTGAGCCCCCAAGACCAAGAGGAATGTGAGCGC...GATGCCATTTCTGCATCTCCCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000423751.2
CDS TCA 90 bp CATCTGCCAGCAGAACCAATGACTCATCGAAGTACTCAGCCACCATaGCCAGGTCAAAGACAGAGTCCAGCCATGCCAGACCCCACTGGA +
Preference number: 5 (lower is better)
Translates to: HLPAEPMTHRSTQPP*PGQRQSPAMPDPTG
Trigger: TCCAGTGGGGTCTGGCATGGCTGGACTCTGTCTTTGACCTGGTCATGGTGGCTGAGTACTTCGATGAGTCATTGGTTCTGCTGGCAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360039.9
ENST00000411994.1
ENST00000413800.5
ENST00000423751.2
ENST00000495882.1
CDS CCA 90 bp TTCCAACCTTATCAGTGCACCCGGAGGAGACTGAAAGGGTGGGGCTaGAGAGGGAGACAGAAAGAGAGAGAGACACACACACACACACAC +
Preference number: 5 (lower is better)
Translates to: FQPYQCTRRRLKGWG*RGRQKERETHTHTH
Trigger: GTGTGTGTGTGTGTGTGTCTCTCTCTCTTTCTGTCTCCCTCTCCAGCCCCACCCTTTCAGTCTCCTCCGGGTGCACTGATAAGGTTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482469.5
ENST00000495882.1
CDS CCA 90 bp TCCACTTTCCAACCTTATCAGTGCACCCGGAGGAGACTGAAAGGGTaGGGCTGGAGAGGGAGACAGAAAGAGAGAGAGACACACACACAC +
Preference number: 5 (lower is better)
Translates to: STFQPYQCTRRRLKG*GWRGRQKERETHTH
Trigger: GTGTGTGTGTGTCTCTCTCTCTTTCTGTCTCCCTCTCCAGCCCCACCCTTTCAGTCTCCTCCGGGTGCACTGATAAGGTTGGAAAGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482469.5
ENST00000495882.1
CDS-3UTR CAA 90 bp CGAAGAGGGGGCTTGCATCGGGACAAAGACTCATCCCTTCTGGGAGATGCAGAATGCTCACAGTCTTGGTaGAGTCTGCCCCCTGAGTTA +
Preference number: 5 (lower is better)
Translates to: RRGGLHRDKDSSLLGDAECSQSW*SLPPEL
Trigger: TAACTCAGGGGGCAGACTCAACCAAGACTGTGAGCA...TTCTGCATCTCCCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCCCCCTCTTCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000423751.2
CDS-3UTR CAA 90 bp GAACCGGCGATCAGTGATGTATTTGGGGTCAGAAGCCTCACCCCCTACCAGACATGCTCACAGTCTTGGTaGAGTCTGCCCCCTGAGTTA +
Preference number: 5 (lower is better)
Translates to: EPAISDVFGVRSLTPYQTCSQSW*SLPPEL
Trigger: TAACTCAGGGGGCAGACTCAACCAAGACTGTGAGCA...TGTCTGGTAGGGGGTGAGGCTTCTGACCCCAAATACATCACTGATCGCCGGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000423751.2
CDS-3UTR CAA 90 bp GGGCTTGCATCGGGACAAAGACTCATCCCTTCTGGGAGATGCAGAAATGGCATCGCCAAAGATGGTGACTaGCGGAAGGCTGATGAGGTG +
Preference number: 5 (lower is better)
Translates to: GLASGQRLIPSGRCRNGIAKDGD*RKADEV
Trigger: CACCTCATCAGCCTTCCGCAAGTCACCATCTTTGGC...GATGCCATTTCTGCATCTCCCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000423751.2
CDS-3UTR CAA 90 bp TTGCTGACAGTGCTGAGGCCCTGCTTATGTCCAGCCTGGGCATTGTGCATGAAGCGAAAGAGGCAGGGCTaGATATCTGGCTGCGATGAT +
Preference number: 5 (lower is better)
Translates to: LLTVLRPCLCPAWALCMKRKRQG*ISGCDD
Trigger: ATCATCGCAGCCAGATATCAAGCCCTGCCTCTTTCG...CTTCATGCACAATGCCCAGGCTGGACATAAGCAGGGCCTCAGCACTGTCAGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
CDS-3UTR CAA 90 bp CGAAGAGGGGGCTTGCATCGGGACAAAGACTCATCCCTTCTGGGAGATGCAGAACGATCAGTGATGTATTaGGGGTCAGAAGCCTCACCC +
Preference number: 5 (lower is better)
Translates to: RRGGLHRDKDSSLLGDAERSVMY*GSEASP
Trigger: GGGTGAGGCTTCTGACCCCAAATACATCACTGATCG...TTCTGCATCTCCCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCCCCCTCTTCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000423751.2
CDS-3UTR CAA 90 bp GGGCTTGCATCGGGACAAAGACTCATCCCTTCTGGGAGATGCAGAAATGGCATCACATTCCTCTTGGTCTaGGGGGCTCAATCCACTCCG +
Preference number: 5 (lower is better)
Translates to: GLASGQRLIPSGRCRNGITFLLV*GAQSTP
Trigger: CGGAGTGGATTGAGCCCCCAAGACCAAGAGGAATGT...GATGCCATTTCTGCATCTCCCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000423751.2
CDS-3UTR CAA 90 bp GGCTTGCATCGGGACAAAGACTCATCCCTTCTGGGAGATGCAGAAATGGCATCTGCGCTCACATTCCTCTaGGTCTTGGGGGCTCAATCC +
Preference number: 5 (lower is better)
Translates to: GLHRDKDSSLLGDAEMASALTFL*VLGAQS
Trigger: GGATTGAGCCCCCAAGACCAAGAGGAATGTGAGCGC...AGATGCCATTTCTGCATCTCCCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000423751.2
CDS-3UTR CAA 90 bp GTTGCTGACAGTGCTGAGGCCCTGCTTATGTCCAGCCTGGGCATTGTGCATGAATGCTTGGCATCCAGCTaGTCCTTGTACTGGAGCTCA +
Preference number: 5 (lower is better)
Translates to: VADSAEALLMSSLGIVHECLASS*SLYWSS
Trigger: TGAGCTCCAGTACAAGGACAAGCTGGATGCCAAGCA...TTCATGCACAATGCCCAGGCTGGACATAAGCAGGGCCTCAGCACTGTCAGCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
CDS-3UTR CAA 90 bp GCTAGGCGCTCACATTCCTCTTGGTCTTGGGGGCTCAATCCACTCCGAAGTATAAGTGGCCTTGAAGTCTaGAGGGGCAGTGAGACGGTA +
Preference number: 5 (lower is better)
Translates to: ARRSHSSWSWGLNPLRSISGLEV*RGSETV
Trigger: TACCGTCTCACTGCCCCTCAAGACTTCAAGGCCACT...TATACTTCGGAGTGGATTGAGCCCCCAAGACCAAGAGGAATGTGAGCGCCTAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
CDS-3UTR CAA 90 bp GGCTTGCATCGGGACAAAGACTCATCCCTTCTGGGAGATGCAGAAATGGCATCTCAGCGAAGAGGGGGCTaGCATCGGGACAAAGACTCA +
Preference number: 5 (lower is better)
Translates to: GLHRDKDSSLLGDAEMASQRRGG*HRDKDS
Trigger: TGAGTCTTTGTCCCGATGCAAGCCCCCTCTTCGCTG...AGATGCCATTTCTGCATCTCCCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000423751.2
CDS GCA 90 bp AGAAGCCTCGAGGATTGGCCAGGAAGGCAGCCAAAGATGGTGACTTaGGGAAGGCTGATGAGGTGGATTTATAGTAGGAGAAGGCAGAGC +
Preference number: 5 (lower is better)
Translates to: RSLEDWPGRQPKMVT*GRLMRWIYSRRRQS
Trigger: GCTCTGCCTTCTCCTACTATAAATCCACCTCATCAGCCTTCCGCAAGTCACCATCTTTGGCTGCCTTCCTGGCCAATCCTCGAGGCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360039.9
ENST00000411994.1
ENST00000413800.5
ENST00000423751.2
ENST00000495882.1
ENST00000498000.5
CDS CCA 90 bp ACCATGACCAGGTCAAAGACAGAGTCCAGCCATGCCAGACCCCACTaGATGAAGGATGAAGACCCCAAATCGAAAGAGGCAGGGCTTGAT +
Preference number: 5 (lower is better)
Translates to: TMTRSKTESSHARPH*MKDEDPKSKEAGLD
Trigger: ATCAAGCCCTGCCTCTTTCGATTTGGGGTCTTCATCCTTCATCCAGTGGGGTCTGGCATGGCTGGACTCTGTCTTTGACCTGGTCATGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360039.9
ENST00000411994.1
ENST00000413800.5
ENST00000423751.2
ENST00000495882.1
CDS-3UTR CAA 90 bp GGGCTTGCATCGGGACAAAGACTCATCCCTTCTGGGAGATGCAGAAATGGCATCCGAAAGAGGCAGGGCTaGATATCTGGCTGCGATGAT +
Preference number: 5 (lower is better)
Translates to: GLASGQRLIPSGRCRNGIRKRQG*ISGCDD
Trigger: ATCATCGCAGCCAGATATCAAGCCCTGCCTCTTTCG...GATGCCATTTCTGCATCTCCCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000423751.2
CDS-3UTR CAA 90 bp GGGCTTGCATCGGGACAAAGACTCATCCCTTCTGGGAGATGCAGAAATGGCATCCGATCAGTGATGTATTaGGGGTCAGAAGCCTCACCC +
Preference number: 5 (lower is better)
Translates to: GLASGQRLIPSGRCRNGIRSVMY*GSEASP
Trigger: GGGTGAGGCTTCTGACCCCAAATACATCACTGATCG...GATGCCATTTCTGCATCTCCCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000423751.2
CDS-3UTR CAA 90 bp TCAGTGATGTATTTGGGGTCAGAAGCCTCACCCCCTACCAGACAATGTTTCGCTGCGCTCACATTCCTCTaGGTCTTGGGGGCTCAATCC +
Preference number: 5 (lower is better)
Translates to: SVMYLGSEASPPTRQCFAALTFL*VLGAQS
Trigger: GGATTGAGCCCCCAAGACCAAGAGGAATGTGAGCGC...AGCGAAACATTGTCTGGTAGGGGGTGAGGCTTCTGACCCCAAATACATCACTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
CDS-3UTR CAA 90 bp GGGCTTGCATCGGGACAAAGACTCATCCCTTCTGGGAGATGCAGAAATGGCATCTGCTTGGCATCCAGCTaGTCCTTGTACTGGAGCTCA +
Preference number: 5 (lower is better)
Translates to: GLASGQRLIPSGRCRNGICLASS*SLYWSS
Trigger: TGAGCTCCAGTACAAGGACAAGCTGGATGCCAAGCA...GATGCCATTTCTGCATCTCCCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000423751.2
CDS-3UTR CAA 90 bp GGCTTGCATCGGGACAAAGACTCATCCCTTCTGGGAGATGCAGAAATGGCATCTAGTGGCCTTGAAGTCTaGAGGGGCAGTGAGACGGTA +
Preference number: 5 (lower is better)
Translates to: GLHRDKDSSLLGDAEMASSGLEV*RGSETV
Trigger: TACCGTCTCACTGCCCCTCAAGACTTCAAGGCCACT...AGATGCCATTTCTGCATCTCCCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000423751.2
CDS-3UTR CAA 90 bp AGAAATGGACGTATCATTCCAACTCACCACGCCCCAAACTTCCTGTGGCTCACTCAGCGAAGAGGGGGCTaGCATCGGGACAAAGACTCA +
Preference number: 5 (lower is better)
Translates to: RNGRIIPTHHAPNFLWLTQRRGG*HRDKDS
Trigger: TGAGTCTTTGTCCCGATGCAAGCCCCCTCTTCGCTG...AGTGAGCCACAGGAAGTTTGGGGCGTGGTGAGTTGGAATGATACGTCCATTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360039.9
ENST00000413800.5
CDS-3UTR CAA 90 bp GGGCTTGCATCGGGACAAAGACTCATCCCTTCTGGGAGATGCAGAAATGGCATCTGTAATGGCAGCACTTaGGGAGGCAGAGTCATGTGG +
Preference number: 5 (lower is better)
Translates to: GLASGQRLIPSGRCRNGICNGST*GGRVMW
Trigger: CCACATGACTCTGCCTCCCAAAGTGCTGCCATTACA...GATGCCATTTCTGCATCTCCCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360039.9
ENST00000413800.5
CDS GCA 90 bp TGTCTATACCCAGACTCTCCTAGGTGGCCCCACAACTACTGTCTCTaGTCTATCACTTTCTTATCTCCAGTTCCTCCCGCTCCCCACCTA +
Preference number: 5 (lower is better)
Translates to: CLYPDSPRWPHNYCL*SITFLSPVPPAPHL
Trigger: TAGGTGGGGAGCGGGAGGAACTGGAGATAAGAAAGTGATAGAGCAGAGACAGTAGTTGTGGGGCCACCTAGGAGAGTCTGGGTATAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495882.1
CDS-3UTR CAA 90 bp AGAAATGGACGTATCATTCCAACTCACCACGCCCCAAACTTCCTGTGGCTCACTAGGCCTGGAAGAGCTTaGGGTAGCCAAACTGGTAGC +
Preference number: 5 (lower is better)
Translates to: RNGRIIPTHHAPNFLWLTRPGRA*GSQTGS
Trigger: GCTACCAGTTTGGCTACCCAAAGCTCTTCCAGGCCT...AGTGAGCCACAGGAAGTTTGGGGCGTGGTGAGTTGGAATGATACGTCCATTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360039.9
ENST00000413800.5
CDS-3UTR CAA 90 bp ATTCCTCTTGGTCTTGGGGGCTCAATCCACTCCGAAGTATATAGCCCAAAACCTATGAGGGCATTGGGATaGAGGGTTTGGGCTCGAGGG +
Preference number: 5 (lower is better)
Translates to: IPLGLGGSIHSEVYSPKPMRALG*RVWARG
Trigger: CCCTCGAGCCCAAACCCTCAATCCCAATGCCCTCAT...AGGTTTTGGGCTATATACTTCGGAGTGGATTGAGCCCCCAAGACCAAGAGGAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
CDS-3UTR CAA 90 bp AGAAATGGACGTATCATTCCAACTCACCACGCCCCAAACTTCCTGTGGCTCACTACATTCCTCTTGGTCTaGGGGGCTCAATCCACTCCG +
Preference number: 5 (lower is better)
Translates to: RNGRIIPTHHAPNFLWLTTFLLV*GAQSTP
Trigger: CGGAGTGGATTGAGCCCCCAAGACCAAGAGGAATGT...AGTGAGCCACAGGAAGTTTGGGGCGTGGTGAGTTGGAATGATACGTCCATTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360039.9
ENST00000413800.5
CDS-3UTR CAA 90 bp GGCTTGCATCGGGACAAAGACTCATCCCTTCTGGGAGATGCAGAAATGGCATCTTGTAATGGCAGCACTTaGGGAGGCAGAGTCATGTGG +
Preference number: 5 (lower is better)
Translates to: GLHRDKDSSLLGDAEMASCNGST*GGRVMW
Trigger: CCACATGACTCTGCCTCCCAAAGTGCTGCCATTACA...AGATGCCATTTCTGCATCTCCCAGAAGGGATGAGTCTTTGTCCCGATGCAAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360039.9
ENST00000413800.5
CDS-3UTR CAA 90 bp AGAAATGGACGTATCATTCCAACTCACCACGCCCCAAACTTCCTGTGGCTCACTTGCTCACAGTCTTGGTaGAGTCTGCCCCCTGAGTTA +
Preference number: 5 (lower is better)
Translates to: RNGRIIPTHHAPNFLWLTCSQSW*SLPPEL
Trigger: TAACTCAGGGGGCAGACTCAACCAAGACTGTGAGCA...AGTGAGCCACAGGAAGTTTGGGGCGTGGTGAGTTGGAATGATACGTCCATTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360039.9
ENST00000413800.5
CDS-3UTR CAA 90 bp TCAGTGATGTATTTGGGGTCAGAAGCCTCACCCCCTACCAGACAATGTTTCGCTCGATCAGTGATGTATTaGGGGTCAGAAGCCTCACCC +
Preference number: 5 (lower is better)
Translates to: SVMYLGSEASPPTRQCFARSVMY*GSEASP
Trigger: GGGTGAGGCTTCTGACCCCAAATACATCACTGATCG...AGCGAAACATTGTCTGGTAGGGGGTGAGGCTTCTGACCCCAAATACATCACTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000411994.1
ENST00000423751.2
CDS-3UTR CAA 90 bp AGAAATGGACGTATCATTCCAACTCACCACGCCCCAAACTTCCTGTGGCTCACTTGCTTGGCATCCAGCTaGTCCTTGTACTGGAGCTCA +
Preference number: 5 (lower is better)
Translates to: RNGRIIPTHHAPNFLWLTCLASS*SLYWSS
Trigger: TGAGCTCCAGTACAAGGACAAGCTGGATGCCAAGCA...AGTGAGCCACAGGAAGTTTGGGGCGTGGTGAGTTGGAATGATACGTCCATTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360039.9
ENST00000413800.5
CDS TCA 90 bp GAAGACCCCAAATCGAAAGAGGCAGGGCTTGATATCTGGCTGCGATaGTCAGTAACAGTGGAAACAGGATGGATGAGGGCATTGGGATTG +
Preference number: 5 (lower is better)
Translates to: EDPKSKEAGLDIWLR*SVTVETGWMRALGL
Trigger: CAATCCCAATGCCCTCATCCATCCTGTTTCCACTGTTACTGATCATCGCAGCCAGATATCAAGCCCTGCCTCTTTCGATTTGGGGTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360039.9
ENST00000411994.1
ENST00000413800.5
ENST00000423751.2
ENST00000495882.1
CDS CCA 72 bp CCCCCAGGCTCCGAGGTCCCCAGAGCCGCAGCGTCCTaGCAGGAGAGAGAGGGCCCATGTGGCACAGGGAAG +
Preference number: 6 (lower is better)
Translates to: PPGSEVPRAAAS*QEREGPCGTGK
Trigger: CTTCCCTGTGCCACATGGGCCCTCTCTCTCCTGCCAGGACGCTGCGGCTCTGGGGACCTCGGAGCCTGGGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000360039.9
ENST00000411994.1
ENST00000413800.5
ENST00000423751.2
ENST00000460995.2
ENST00000482469.5
ENST00000495882.1
ENST00000498000.5
CDS CCA 72 bp CCCCACGGGCCCCAGGCCTGTAGAAGCCTCGAGGATTaGCCAGGAAGGCAGCCAAAGATGGTGACTTGCGGA +
Preference number: 6 (lower is better)
Translates to: PHGPQACRSLED*PGRQPKMVTCG
Trigger: TCCGCAAGTCACCATCTTTGGCTGCCTTCCTGGCCAATCCTCGAGGCTTCTACAGGCCTGGGGCCCGTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360039.9
ENST00000411994.1
ENST00000413800.5
ENST00000423751.2
ENST00000495882.1
ENST00000498000.5
CDS GCA 72 bp CTCCCGGATTTATGTGTCTTCAGGAACACCAGTCGCTaGCGGGGTGGGCAGGACGGAAGGGCTGGTCGTAGG +
Preference number: 6 (lower is better)
Translates to: LPDLCVFRNTSR*RGGQDGRAGRR
Trigger: CCTACGACCAGCCCTTCCGTCCTGCCCACCCCGGCAGCGACTGGTGTTCCTGAAGACACATAAATCCGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000460995.2
ENST00000482469.5
ENST00000495882.1
CDS CCA 72 bp GAGGATGTGGAAGGGGAGCTGGGTGCCTCCACCCTGTaGGCGGTAGCCTTTTACCCTAGAGGCCTGGAAGAG +
Preference number: 6 (lower is better)
Translates to: EDVEGELGASTL*AVAFYPRGLEE
Trigger: CTCTTCCAGGCCTCTAGGGTAAAAGGCTACCGCCCACAGGGTGGAGGCACCCAGCTCCCCTTCCACATCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000495882.1
CDS GCA 72 bp GTGCTGAGGCCCTGCTTATGTCCAGCCTGGGCATTGTaGATGAAGCCCACCACGTCATCTAGACCCCAGCAC +
Preference number: 6 (lower is better)
Translates to: VLRPCLCPAWAL*MKPTTSSRPQH
Trigger: GTGCTGGGGTCTAGATGACGTGGTGGGCTTCATGCACAATGCCCAGGCTGGACATAAGCAGGGCCTCAGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360039.9
ENST00000411994.1
ENST00000413800.5
ENST00000423751.2
ENST00000495882.1
CDS CCA 72 bp GCGGTAGCCTTTTACCCTAGAGGCCTGGAAGAGCTTTaGGTAGCCAAACTGGTAGCGGGCAGGGAGGGCGAA +
Preference number: 6 (lower is better)
Translates to: AVAFYPRGLEEL*VAKLVAGREGE
Trigger: TTCGCCCTCCCTGCCCGCTACCAGTTTGGCTACCCAAAGCTCTTCCAGGCCTCTAGGGTAAAAGGCTACCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000482469.5
ENST00000495882.1
CDS CAA 90 bp AGTAACAGTGGAAACAGGATGGATGAGGGCATTGGGATTGAGGGTTaGGGCTCGAGGGCCAGCACCAGAAGGCAAGACCTGCAGCTGTGG +
Preference number: 6 (lower is better)
Translates to: SNSGNRMDEGIGIEG*GSRASTRRQDLQLW
Trigger: CCACAGCTGCAGGTCTTGCCTTCTGGTGCTGGCCCTCGAGCCCAAACCCTCAATCCCAATGCCCTCATCCATCCTGTTTCCACTGTTACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360039.9
ENST00000411994.1
ENST00000413800.5
ENST00000423751.2
ENST00000495882.1
CDS TCA 72 bp CCAGGCCTGCTCACAGTCTTGGTTGAGTCTGCCCCCTaGGTTAGCAGATTTTTGCCTCTGTCAGCGTCAGGC +
Preference number: 6 (lower is better)
Translates to: PGLLTVLVESAP*VSRFLPLSASG
Trigger: GCCTGACGCTGACAGAGGCAAAAATCTGCTAACTCAGGGGGCAGACTCAACCAAGACTGTGAGCAGGCCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000360039.9
ENST00000423751.2
CDS TCA 72 bp CCAGGCCTGCTCACAGTCTTGGTTGAGTCTGCCCCCTaGGTTAGCAGATTTTTGCCTCTGTCAGCGTCCACC +
Preference number: 6 (lower is better)
Translates to: PGLLTVLVESAP*VSRFLPLSAST
Trigger: GGTGGACGCTGACAGAGGCAAAAATCTGCTAACTCAGGGGGCAGACTCAACCAAGACTGTGAGCAGGCCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000482469.5
CDS GCA 72 bp GGTCCCCATAGCGGTGAAGCAGGCTCAGCACAGAGCTaGTCCCGGATTTATGTGTCTTCAGGAACACCAGTC +
Preference number: 6 (lower is better)
Translates to: GPHSGEAGSAQS*SRIYVSSGTPV
Trigger: GACTGGTGTTCCTGAAGACACATAAATCCGGGAGCAGCTCTGTGCTGAGCCTGCTTCACCGCTATGGGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360039.9
ENST00000413800.5
ENST00000460995.2
ENST00000482469.5
ENST00000495882.1
CDS TCA 72 bp CCAGGCCTGCTCACAGTCTTGGTTGAGTCTGCCCCCTaGGTTAGCAGATTTTTGCCTCTGTCAGCGTTGCAG +
Preference number: 6 (lower is better)
Translates to: PGLLTVLVESAP*VSRFLPLSALQ
Trigger: CTGCAACGCTGACAGAGGCAAAAATCTGCTAACTCAGGGGGCAGACTCAACCAAGACTGTGAGCAGGCCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000460995.2
ENST00000498000.5
CDS CCA 72 bp TTGCTGACAGTGCTGAGGCCCTGCTTATGTCCAGCCTaGGCATTGTGCATGAAGCCCACCACGTCATCTAGA +
Preference number: 6 (lower is better)
Translates to: LLTVLRPCLCPA*ALCMKPTTSSR
Trigger: TCTAGATGACGTGGTGGGCTTCATGCACAATGCCCAGGCTGGACATAAGCAGGGCCTCAGCACTGTCAGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360039.9
ENST00000411994.1
ENST00000413800.5
ENST00000423751.2
ENST00000495882.1
CDS TCA 72 bp CCAGGCCTGCTCACAGTCTTGGTTGAGTCTGCCCCCTaGGTTAGCAGATTTTTGCCTCTGTCAGCGTCTAGA +
Preference number: 6 (lower is better)
Translates to: PGLLTVLVESAP*VSRFLPLSASR
Trigger: TCTAGACGCTGACAGAGGCAAAAATCTGCTAACTCAGGGGGCAGACTCAACCAAGACTGTGAGCAGGCCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000495882.1
CDS TCA 72 bp GCAGAACCAATGACTCATCGAAGTACTCAGCCACCATaGCCAGGTCAAAGACAGAGTCCAGCCATGCCAGAC +
Preference number: 6 (lower is better)
Translates to: AEPMTHRSTQPP*PGQRQSPAMPD
Trigger: GTCTGGCATGGCTGGACTCTGTCTTTGACCTGGTCATGGTGGCTGAGTACTTCGATGAGTCATTGGTTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360039.9
ENST00000411994.1
ENST00000413800.5
ENST00000423751.2
ENST00000495882.1
CDS GCA 72 bp CCAGACTCTCCTAGGTGGCCCCACAACTACTGTCTCTaGTCTATCACTTTCTTATCTCCAGTTCCTCCCGCT +
Preference number: 6 (lower is better)
Translates to: PDSPRWPHNYCL*SITFLSPVPPA
Trigger: AGCGGGAGGAACTGGAGATAAGAAAGTGATAGAGCAGAGACAGTAGTTGTGGGGCCACCTAGGAGAGTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495882.1
CDS CCA 72 bp CAGCCAAAGATGGTGACTTGCGGAAGGCTGATGAGGTaGATTTATAGTAGGAGAAGGCAGAGCGAGCCAGAG +
Preference number: 6 (lower is better)
Translates to: QPKMVTCGRLMR*IYSRRRQSEPE
Trigger: CTCTGGCTCGCTCTGCCTTCTCCTACTATAAATCCACCTCATCAGCCTTCCGCAAGTCACCATCTTTGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360039.9
ENST00000411994.1
ENST00000413800.5
ENST00000423751.2
ENST00000495882.1
ENST00000498000.5
CDS CCA 72 bp AGGTCAAAGACAGAGTCCAGCCATGCCAGACCCCACTaGATGAAGGATGAAGACCCCAAATCGAAAGAGGCA +
Preference number: 6 (lower is better)
Translates to: RSKTESSHARPH*MKDEDPKSKEA
Trigger: TGCCTCTTTCGATTTGGGGTCTTCATCCTTCATCCAGTGGGGTCTGGCATGGCTGGACTCTGTCTTTGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360039.9
ENST00000411994.1
ENST00000413800.5
ENST00000423751.2
ENST00000495882.1
CDS TCA 72 bp AAATCGAAAGAGGCAGGGCTTGATATCTGGCTGCGATaGTCAGTAACAGTGGAAACAGGATGGATGAGGGCA +
Preference number: 6 (lower is better)
Translates to: KSKEAGLDIWLR*SVTVETGWMRA
Trigger: TGCCCTCATCCATCCTGTTTCCACTGTTACTGATCATCGCAGCCAGATATCAAGCCCTGCCTCTTTCGATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360039.9
ENST00000411994.1
ENST00000413800.5
ENST00000423751.2
ENST00000495882.1
CDS TCA 72 bp TATAAGGGAAGGAGAGAAAAAGCCCCAGCTCGTGAATaGAACAGCCAGCAAGAGAGAGAGAGATCAGATCAA +
Preference number: 6 (lower is better)
Translates to: YKGRREKAPARE*NSQQERERSDQ
Trigger: TTGATCTGATCTCTCTCTCTCTTGCTGGCTGTTTCATTCACGAGCTGGGGCTTTTTCTCTCCTTCCCTTATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495882.1