Pregenerated sensors for GAGE1 (Homo sapiens)
Ensembl gene IDs: ENSG00000205777Ensembl transcript IDs: ENST00000381700.10, ENST00000381709.6
Found 55 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCTTCAGAGAACGCGACCCTCACAAAGTTTGAGGGGATAGGTACCTaGAGCTGCCCGTTTGGTCACTGCTGTTTAAGTAGGGTCCAAATC | + |
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Preference number: 1 (lower is better) Translates to: SSENATLTKFEGIGT*SCPFGHCCLSRVQI Trigger: GATTTGGACCCTACTTAAACAGCAGTGACCAAACGGGCAGCTCCAGGTACCTATCCCCTCAAACTTTGTGAGGGTCGCGTTCTCTGAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381709.6 |
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| 3UTR CCA 90 bp | GGCTCCAGCTTGGGTTCAAGCATGCTGGGTAAACATGCAGCTGGCTaGGTCACAGCACAGTCAAAGCACTTTGTTTTTCAGTCAGAACAA | + |
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Preference number: 1 (lower is better) Translates to: GSSLGSSMLGKHAAG*VTAQSKHFVFQSEQ Trigger: TTGTTCTGACTGAAAAACAAAGTGCTTTGACTGTGCTGTGACCCAGCCAGCTGCATGTTTACCCAGCATGCTTGAACCCAAGCTGGAGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000381709.6 |
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| 3UTR CCA 90 bp | ATTTTGAGCAACAACTTAAACACCTTTATGTTCAAGGCTCCAGCTTaGGTTCAAGCATGCTGGGTAAACATGCAGCTGGCTGGGTCACAG | + |
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Preference number: 1 (lower is better) Translates to: ILSNNLNTFMFKAPA*VQACWVNMQLAGSQ Trigger: CTGTGACCCAGCCAGCTGCATGTTTACCCAGCATGCTTGAACCCAAGCTGGAGCCTTGAACATAAAGGTGTTTAAGTTGTTGCTCAAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381709.6 |
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| 3UTR TCA 90 bp | CCGTTTTATGAAGCTAGAGGAACCTTGATAACAACGTCCAACAAATaGGCATATGAAATAAAAGTACAGGTAATGTCACTCATGAGGATA | + |
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Preference number: 1 (lower is better) Translates to: PFYEARGTLITTSNK*AYEIKVQVMSLMRI Trigger: TATCCTCATGAGTGACATTACCTGTACTTTTATTTCATATGCTCATTTGTTGGACGTTGTTATCAAGGTTCCTCTAGCTTCATAAAACGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381709.6 |
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| 3UTR CAA 90 bp | TATTTTGAGCAACAACTTAAACACCTTTATGTTCAAGGCTCCAGCTaGGGTTCAAGCATGCTGGGTAAACATGCAGCTGGCTGGGTCACA | + |
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Preference number: 2 (lower is better) Translates to: YFEQQLKHLYVQGSS*GSSMLGKHAAGWVT Trigger: TGTGACCCAGCCAGCTGCATGTTTACCCAGCATGCTTGAACCCAAGCTGGAGCCTTGAACATAAAGGTGTTTAAGTTGTTGCTCAAAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381709.6 |
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| 3UTR-3UTR TCA 90 bp | TGGCTGGGTCACAGCACAGTCAAAGCACTTTGTTTTTCAGTCAGAACAAGAGAATCACATGTTTTAAGATaGCTCAGGTCAGTGTTTGAT | + |
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Preference number: 2 (lower is better) Translates to: WLGHSTVKALCFSVRTRESHVLR*LRSVFD Trigger: ATCAAACACTGACCTGAGTCATCTTAAAACATGTGA...TTCTCTTGTTCTGACTGAAAAACAAAGTGCTTTGACTGTGCTGTGACCCAGCCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000381709.6 |
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| 3UTR-3UTR TCA 90 bp | CTGGATAGAAAATCAATACATGAGAATTATGCCTCTACACACAGCTCAAGGAGATTGGGAGAACTTCAATaGAGAATTTTCCAACATAGG | + |
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Preference number: 2 (lower is better) Translates to: LDRKSIHENYASTHSSRRLGELQ*RIFQHR Trigger: CCTATGTTGGAAAATTCTTCATTGAAGTTCTCCCAA...TCTCCTTGAGCTGTGTGTAGAGGCATAATTCTCATGTATTGATTTTCTATCCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000381700.10 ENST00000381709.6 |
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| 3UTR-3UTR CCA 90 bp | CTGGATAGAAAATCAATACATGAGAATTATGCCTCTACACACAGCTCAAGGAGAGCTGTAAAGCTTTATTaGGAGAACTTCAATGAAGAA | + |
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Preference number: 2 (lower is better) Translates to: LDRKSIHENYASTHSSRRAVKLY*ENFNEE Trigger: TTCTTCATTGAAGTTCTCCCAATAAAGCTTTACAGC...TCTCCTTGAGCTGTGTGTAGAGGCATAATTCTCATGTATTGATTTTCTATCCAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000381700.10 ENST00000381709.6 |
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| 3UTR GCA 72 bp | ACCTTTATGTTCAAGGCTCCAGCTTGGGTTCAAGCATaGTGGGTAAACATGCAGCTGGCTGGGTCACAGCAC | + |
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Preference number: 3 (lower is better) Translates to: TFMFKAPAWVQA*WVNMQLAGSQH Trigger: GTGCTGTGACCCAGCCAGCTGCATGTTTACCCAGCATGCTTGAACCCAAGCTGGAGCCTTGAACATAAAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381709.6 |
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| 3UTR CCA 72 bp | AACGCGACCCTCACAAAGTTTGAGGGGATAGGTACCTaGAGCTGCCCGTTTGGTCACTGCTGTTTAAGTAGG | + |
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Preference number: 3 (lower is better) Translates to: NATLTKFEGIGT*SCPFGHCCLSR Trigger: CCTACTTAAACAGCAGTGACCAAACGGGCAGCTCCAGGTACCTATCCCCTCAAACTTTGTGAGGGTCGCGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381709.6 |
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| 3UTR GCA 72 bp | ACCCTCACAAAGTTTGAGGGGATAGGTACCTGGAGCTaGCCGTTTGGTCACTGCTGTTTAAGTAGGGTCCAA | + |
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Preference number: 3 (lower is better) Translates to: TLTKFEGIGTWS*PFGHCCLSRVQ Trigger: TTGGACCCTACTTAAACAGCAGTGACCAAACGGGCAGCTCCAGGTACCTATCCCCTCAAACTTTGTGAGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381709.6 |
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| 3UTR CCA 72 bp | TTTATGTTCAAGGCTCCAGCTTGGGTTCAAGCATGCTaGGTAAACATGCAGCTGGCTGGGTCACAGCACAGT | + |
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Preference number: 3 (lower is better) Translates to: FMFKAPAWVQAC*VNMQLAGSQHS Trigger: ACTGTGCTGTGACCCAGCCAGCTGCATGTTTACCCAGCATGCTTGAACCCAAGCTGGAGCCTTGAACATAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381709.6 |
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| 3UTR GCA 72 bp | GCTAAAGCATCCTCGCAACAGGCAACAAGAATGTCATaGCTAGGTATATCCGCACTGAGGGGGTCAGGTTAT | + |
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Preference number: 3 (lower is better) Translates to: AKASSQQATRMS*LGISALRGSGY Trigger: ATAACCTGACCCCCTCAGTGCGGATATACCTAGGCATGACATTCTTGTTGCCTGTTGCGAGGATGCTTTAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000381709.6 |
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| 3UTR CCA 72 bp | AACAACTTAAACACCTTTATGTTCAAGGCTCCAGCTTaGGTTCAAGCATGCTGGGTAAACATGCAGCTGGCT | + |
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Preference number: 3 (lower is better) Translates to: NNLNTFMFKAPA*VQACWVNMQLA Trigger: AGCCAGCTGCATGTTTACCCAGCATGCTTGAACCCAAGCTGGAGCCTTGAACATAAAGGTGTTTAAGTTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381709.6 |
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| 3UTR TCA 72 bp | GCATTACTCACAGCCTTGAGGAGACTTGAGTTCCAGTaGATGGAAAAAGAGGTTTTACATACCAACCCGTTT | + |
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Preference number: 3 (lower is better) Translates to: ALLTALRRLEFQ*MEKEVLHTNPF Trigger: AAACGGGTTGGTATGTAAAACCTCTTTTTCCATTCACTGGAACTCAAGTCTCCTCAAGGCTGTGAGTAATGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000381709.6 |
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| 3UTR-3UTR CAA 90 bp | TGGCTGGGTCACAGCACAGTCAAAGCACTTTGTTTTTCAGTCAGAACAAGAGAACAGATAGCTTTCAAATaGAAGAGGCATCTTCAGAGA | + |
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Preference number: 3 (lower is better) Translates to: WLGHSTVKALCFSVRTREQIAFK*KRHLQR Trigger: TCTCTGAAGATGCCTCTTCAATTTGAAAGCTATCTG...TTCTCTTGTTCTGACTGAAAAACAAAGTGCTTTGACTGTGCTGTGACCCAGCCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000381709.6 |
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| 3UTR TCA 72 bp | CCGTTTGGTCACTGCTGTTTAAGTAGGGTCCAAATCTaGGAGAAGCATTCTAGAAAAGCTCATTATGGGAAA | + |
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Preference number: 3 (lower is better) Translates to: PFGHCCLSRVQI*EKHSRKAHYGK Trigger: TTTCCCATAATGAGCTTTTCTAGAATGCTTCTCTCAGATTTGGACCCTACTTAAACAGCAGTGACCAAACGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381709.6 |
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| 3UTR TCA 72 bp | GAAGCTAGAGGAACCTTGATAACAACGTCCAACAAATaGGCATATGAAATAAAAGTACAGGTAATGTCACTC | + |
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Preference number: 3 (lower is better) Translates to: EARGTLITTSNK*AYEIKVQVMSL Trigger: GAGTGACATTACCTGTACTTTTATTTCATATGCTCATTTGTTGGACGTTGTTATCAAGGTTCCTCTAGCTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381709.6 |
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| 3UTR CCA 72 bp | CACAAGACTTCTTTGCAGAAGGCTGTAAAGCTTTATTaGGAGAACTTCAATGAAGAATTTTCCAACATAGGA | + |
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Preference number: 3 (lower is better) Translates to: HKTSLQKAVKLY*ENFNEEFSNIG Trigger: TCCTATGTTGGAAAATTCTTCATTGAAGTTCTCCCAATAAAGCTTTACAGCCTTCTGCAAAGAAGTCTTGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000381700.10 ENST00000381709.6 |
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| 3UTR TCA 72 bp | AGGAACCTTGATAACAACGTCCAACAAATGAGCATATaGAATAAAAGTACAGGTAATGTCACTCATGAGGAT | + |
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Preference number: 3 (lower is better) Translates to: RNLDNNVQQMSI*NKSTGNVTHED Trigger: ATCCTCATGAGTGACATTACCTGTACTTTTATTTCATATGCTCATTTGTTGGACGTTGTTATCAAGGTTCCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381709.6 |
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| CDS-3UTR CCA 90 bp | TGGCTGGGTCACAGCACAGTCAAAGCACTTTGTTTTTCAGTCAGAACAAGAGAAGAGGGGATAGGTACCTaGAGCTGCCCGTTTGGTCAC | + |
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Preference number: 4 (lower is better) Translates to: WLGHSTVKALCFSVRTREEGIGT*SCPFGH Trigger: GTGACCAAACGGGCAGCTCCAGGTACCTATCCCCTC...TTCTCTTGTTCTGACTGAAAAACAAAGTGCTTTGACTGTGCTGTGACCCAGCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000381709.6 |
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| CDS-3UTR GCA 90 bp | TGGCTGGGTCACAGCACAGTCAAAGCACTTTGTTTTTCAGTCAGAACAAGAGAAGCCCTAGAGACACCATaGAAGGTTTGTGTGCCACAT | + |
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Preference number: 4 (lower is better) Translates to: WLGHSTVKALCFSVRTREALETP*KVCVPH Trigger: ATGTGGCACACAAACCTTGCATGGTGTCTCTAGGGC...TTCTCTTGTTCTGACTGAAAAACAAAGTGCTTTGACTGTGCTGTGACCCAGCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000381709.6 |
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| CDS-3UTR CCA 90 bp | TGGCTGGGTCACAGCACAGTCAAAGCACTTTGTTTTTCAGTCAGAACAAGAGAAAAACATGCAGCTGGCTaGGTCACAGCACAGTCAAAG | + |
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Preference number: 4 (lower is better) Translates to: WLGHSTVKALCFSVRTREKHAAG*VTAQSK Trigger: CTTTGACTGTGCTGTGACCCAGCCAGCTGCATGTTT...TTCTCTTGTTCTGACTGAAAAACAAAGTGCTTTGACTGTGCTGTGACCCAGCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000381709.6 |
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| 3UTR CAA 72 bp | CAACAACTTAAACACCTTTATGTTCAAGGCTCCAGCTaGGGTTCAAGCATGCTGGGTAAACATGCAGCTGGC | + |
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Preference number: 4 (lower is better) Translates to: QQLKHLYVQGSS*GSSMLGKHAAG Trigger: GCCAGCTGCATGTTTACCCAGCATGCTTGAACCCAAGCTGGAGCCTTGAACATAAAGGTGTTTAAGTTGTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381709.6 |
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| CDS-3UTR TCA 90 bp | GCTGTAAAGCTTTATTGGGAGAACTTCAATGAAGAATTTTCCAACATAGGAGCATGCAGTCAGCATGGGTaGCAGAGTGAGACCTGTCTC | + |
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Preference number: 4 (lower is better) Translates to: AVKLYWENFNEEFSNIGACSQHG*QSETCL Trigger: GAGACAGGTCTCACTCTGTCACCCATGCTGACTGCA...TGCTCCTATGTTGGAAAATTCTTCATTGAAGTTCTCCCAATAAAGCTTTACAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381709.6 |
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| CDS-3UTR TCA 90 bp | CACAAGACTTCTTTGCAGAAGGCTGTAAAGCTTTATTGGGAGAACTTCAATGAAGACCCTCACAAAGTTTaGGGGGATAGGTACCTGGAG | + |
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Preference number: 4 (lower is better) Translates to: HKTSLQKAVKLYWENFNEDPHKV*GDRYLE Trigger: CTCCAGGTACCTATCCCCTCAAACTTTGTGAGGGTC...TTCATTGAAGTTCTCCCAATAAAGCTTTACAGCCTTCTGCAAAGAAGTCTTGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000381709.6 |
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| CDS-3UTR GCA 90 bp | GATTCACAAGACTTCTTTGCAGAAGGCTGTAAAGCTTTATTGGGAGAACTTCAAATAGGTACCTGGAGCTaGCCGTTTGGTCACTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: DSQDFFAEGCKALLGELQIGTWS*PFGHCC Trigger: ACAGCAGTGACCAAACGGGCAGCTCCAGGTACCTAT...TTGAAGTTCTCCCAATAAAGCTTTACAGCCTTCTGCAAAGAAGTCTTGTGAATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381709.6 |
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| CDS-3UTR CCA 90 bp | CACAAGACTTCTTTGCAGAAGGCTGTAAAGCTTTATTGGGAGAACTTCAATGAATGGGTTCAAGCATGCTaGGTAAACATGCAGCTGGCT | + |
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Preference number: 4 (lower is better) Translates to: HKTSLQKAVKLYWENFNEWVQAC*VNMQLA Trigger: AGCCAGCTGCATGTTTACCCAGCATGCTTGAACCCA...TTCATTGAAGTTCTCCCAATAAAGCTTTACAGCCTTCTGCAAAGAAGTCTTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381709.6 |
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| CDS-3UTR CCA 90 bp | GATTCACAAGACTTCTTTGCAGAAGGCTGTAAAGCTTTATTGGGAGAACTTCAATTCAAGGCTCCAGCTTaGGTTCAAGCATGCTGGGTA | + |
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Preference number: 4 (lower is better) Translates to: DSQDFFAEGCKALLGELQFKAPA*VQACWV Trigger: TACCCAGCATGCTTGAACCCAAGCTGGAGCCTTGAA...TTGAAGTTCTCCCAATAAAGCTTTACAGCCTTCTGCAAAGAAGTCTTGTGAATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381709.6 |
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| CDS-3UTR TCA 90 bp | CTGGATAGAAAATCAATACATGAGAATTATGCCTCTACACACAGCTCAAGGAGACATTACTCACAGCCTTaGGGAGACTTGAGTTCCAGT | + |
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Preference number: 4 (lower is better) Translates to: LDRKSIHENYASTHSSRRHYSQP*GDLSSS Trigger: ACTGGAACTCAAGTCTCCTCAAGGCTGTGAGTAATG...TCTCCTTGAGCTGTGTGTAGAGGCATAATTCTCATGTATTGATTTTCTATCCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381709.6 |
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| CDS-3UTR TCA 90 bp | TGGCTGGGTCACAGCACAGTCAAAGCACTTTGTTTTTCAGTCAGAACAAGAGAAAGTAGGGTCCAAATCTaGGAGAAGCATTCTAGAAAA | + |
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Preference number: 4 (lower is better) Translates to: WLGHSTVKALCFSVRTRESRVQI*EKHSRK Trigger: TTTTCTAGAATGCTTCTCTCAGATTTGGACCCTACT...TTCTCTTGTTCTGACTGAAAAACAAAGTGCTTTGACTGTGCTGTGACCCAGCCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000381709.6 |
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| CDS-3UTR GCA 90 bp | CTGGATAGAAAATCAATACATGAGAATTATGCCTCTACACACAGCTCAAGGAGATGCCCGTTTGGTCACTaGTGTTTAAGTAGGGTCCAA | + |
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Preference number: 4 (lower is better) Translates to: LDRKSIHENYASTHSSRRCPFGH*CLSRVQ Trigger: TTGGACCCTACTTAAACAGCAGTGACCAAACGGGCA...TCTCCTTGAGCTGTGTGTAGAGGCATAATTCTCATGTATTGATTTTCTATCCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381709.6 |
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| CDS-3UTR CCA 90 bp | GCTGTAAAGCTTTATTGGGAGAACTTCAATGAAGAATTTTCCAACATAGGAGCAAAAGGCCAAGGAGAGTaGATTACTTGCGCTCAGGAG | + |
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Preference number: 4 (lower is better) Translates to: AVKLYWENFNEEFSNIGAKGQGE*ITCAQE Trigger: CTCCTGAGCGCAAGTAATCCACTCTCCTTGGCCTTT...TGCTCCTATGTTGGAAAATTCTTCATTGAAGTTCTCCCAATAAAGCTTTACAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381709.6 |
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| CDS-3UTR CCA 90 bp | GATTCACAAGACTTCTTTGCAGAAGGCTGTAAAGCTTTATTGGGAGAACTTCAAGCTGAGGCTAGTGGATaGCTTGAGATTAGGAGTATA | + |
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Preference number: 4 (lower is better) Translates to: DSQDFFAEGCKALLGELQAEASG*LEIRSI Trigger: TATACTCCTAATCTCAAGCCATCCACTAGCCTCAGC...TTGAAGTTCTCCCAATAAAGCTTTACAGCCTTCTGCAAAGAAGTCTTGTGAATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381709.6 |
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| CDS-3UTR GCA 90 bp | CACAAGACTTCTTTGCAGAAGGCTGTAAAGCTTTATTGGGAGAACTTCAATGAACATGCAAGGTTTGTGTaGCACATTTTGGTAGATGCT | + |
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Preference number: 4 (lower is better) Translates to: HKTSLQKAVKLYWENFNEHARFV*HILVDA Trigger: AGCATCTACCAAAATGTGGCACACAAACCTTGCATG...TTCATTGAAGTTCTCCCAATAAAGCTTTACAGCCTTCTGCAAAGAAGTCTTGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381709.6 |
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| CDS-3UTR CCA 90 bp | TGGCTGGGTCACAGCACAGTCAAAGCACTTTGTTTTTCAGTCAGAACAAGAGAAGCTGTAAAGCTTTATTaGGAGAACTTCAATGAAGAA | + |
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Preference number: 4 (lower is better) Translates to: WLGHSTVKALCFSVRTREAVKLY*ENFNEE Trigger: TTCTTCATTGAAGTTCTCCCAATAAAGCTTTACAGC...TTCTCTTGTTCTGACTGAAAAACAAAGTGCTTTGACTGTGCTGTGACCCAGCCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000381709.6 |
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| CDS-3UTR CCA 90 bp | CACAAGACTTCTTTGCAGAAGGCTGTAAAGCTTTATTGGGAGAACTTCAATGAAGAGGGGGTCAGGTTATaGAGTTTTATAGGAGAGTTT | + |
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Preference number: 4 (lower is better) Translates to: HKTSLQKAVKLYWENFNEEGVRL*SFIGEF Trigger: AAACTCTCCTATAAAACTCCATAACCTGACCCCCTC...TTCATTGAAGTTCTCCCAATAAAGCTTTACAGCCTTCTGCAAAGAAGTCTTGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000381709.6 |
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| CDS-3UTR TCA 90 bp | GATTCACAAGACTTCTTTGCAGAAGGCTGTAAAGCTTTATTGGGAGAACTTCAATTCTGCCTTATCTTGTaGGGATCTAAAGAGGTCATA | + |
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Preference number: 4 (lower is better) Translates to: DSQDFFAEGCKALLGELQFCLIL*GSKEVI Trigger: TATGACCTCTTTAGATCCTCACAAGATAAGGCAGAA...TTGAAGTTCTCCCAATAAAGCTTTACAGCCTTCTGCAAAGAAGTCTTGTGAATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381709.6 |
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| CDS-3UTR TCA 90 bp | GATTCACAAGACTTCTTTGCAGAAGGCTGTAAAGCTTTATTGGGAGAACTTCAATTGGGAGAACTTCAATaGAGAATTTTCCAACATAGG | + |
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Preference number: 4 (lower is better) Translates to: DSQDFFAEGCKALLGELQLGELQ*RIFQHR Trigger: CCTATGTTGGAAAATTCTTCATTGAAGTTCTCCCAA...TTGAAGTTCTCCCAATAAAGCTTTACAGCCTTCTGCAAAGAAGTCTTGTGAATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000381700.10 ENST00000381709.6 |
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| CDS-3UTR TCA 90 bp | GATTCACAAGACTTCTTTGCAGAAGGCTGTAAAGCTTTATTGGGAGAACTTCAATGGCTTGACTTACTCTaGAAAAGTCCATCTACAAAA | + |
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Preference number: 4 (lower is better) Translates to: DSQDFFAEGCKALLGELQWLDLL*KSPSTK Trigger: TTTTGTAGATGGACTTTTTCAGAGTAAGTCAAGCCA...TTGAAGTTCTCCCAATAAAGCTTTACAGCCTTCTGCAAAGAAGTCTTGTGAATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381709.6 |
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| CDS-3UTR TCA 90 bp | CTGGATAGAAAATCAATACATGAGAATTATGCCTCTACACACAGCTCAAGGAGATCACATGTTTTAAGATaGCTCAGGTCAGTGTTTGAT | + |
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Preference number: 4 (lower is better) Translates to: LDRKSIHENYASTHSSRRSHVLR*LRSVFD Trigger: ATCAAACACTGACCTGAGTCATCTTAAAACATGTGA...TCTCCTTGAGCTGTGTGTAGAGGCATAATTCTCATGTATTGATTTTCTATCCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381709.6 |
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| CDS-3UTR TCA 90 bp | GATTCACAAGACTTCTTTGCAGAAGGCTGTAAAGCTTTATTGGGAGAACTTCAAAGACTTGAGTTCCAGTaGATGGAAAAAGAGGTTTTA | + |
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Preference number: 4 (lower is better) Translates to: DSQDFFAEGCKALLGELQRLEFQ*MEKEVL Trigger: TAAAACCTCTTTTTCCATTCACTGGAACTCAAGTCT...TTGAAGTTCTCCCAATAAAGCTTTACAGCCTTCTGCAAAGAAGTCTTGTGAATC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000381709.6 |
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| CDS-3UTR GCA 90 bp | GATTCACAAGACTTCTTTGCAGAAGGCTGTAAAGCTTTATTGGGAGAACTTCAAGGTAGATCTGCTCAATaGCATAAAATCAGAAAAGGA | + |
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Preference number: 4 (lower is better) Translates to: DSQDFFAEGCKALLGELQGRSAQ*HKIRKG Trigger: TCCTTTTCTGATTTTATGGCATTGAGCAGATCTACC...TTGAAGTTCTCCCAATAAAGCTTTACAGCCTTCTGCAAAGAAGTCTTGTGAATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381709.6 |
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| CDS-3UTR CCA 90 bp | GATTCACAAGACTTCTTTGCAGAAGGCTGTAAAGCTTTATTGGGAGAACTTCAAGCTGTAAAGCTTTATTaGGAGAACTTCAATGAAGAA | + |
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Preference number: 4 (lower is better) Translates to: DSQDFFAEGCKALLGELQAVKLY*ENFNEE Trigger: TTCTTCATTGAAGTTCTCCCAATAAAGCTTTACAGC...TTGAAGTTCTCCCAATAAAGCTTTACAGCCTTCTGCAAAGAAGTCTTGTGAATC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000381700.10 ENST00000381709.6 |
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| CDS-3UTR CAA 90 bp | GATTCACAAGACTTCTTTGCAGAAGGCTGTAAAGCTTTATTGGGAGAACTTCAAGTTCAAGGCTCCAGCTaGGGTTCAAGCATGCTGGGT | + |
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Preference number: 5 (lower is better) Translates to: DSQDFFAEGCKALLGELQVQGSS*GSSMLG Trigger: ACCCAGCATGCTTGAACCCAAGCTGGAGCCTTGAAC...TTGAAGTTCTCCCAATAAAGCTTTACAGCCTTCTGCAAAGAAGTCTTGTGAATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381709.6 |
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| CDS-3UTR CAA 90 bp | TGGCTGGGTCACAGCACAGTCAAAGCACTTTGTTTTTCAGTCAGAACAAGAGAAAGTCCAAAGCATTTATaGGGAGAACTTAGAGTAGGC | + |
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Preference number: 5 (lower is better) Translates to: WLGHSTVKALCFSVRTRESPKHL*GELRVG Trigger: GCCTACTCTAAGTTCTCCCAATAAATGCTTTGGACT...TTCTCTTGTTCTGACTGAAAAACAAAGTGCTTTGACTGTGCTGTGACCCAGCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000381709.6 |
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| CDS-3UTR CAA 90 bp | CACAAGACTTCTTTGCAGAAGGCTGTAAAGCTTTATTGGGAGAACTTCAATGAATGTAATCCCAACACTTaGAAAGGCCAAGGAGAGTGG | + |
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Preference number: 5 (lower is better) Translates to: HKTSLQKAVKLYWENFNECNPNT*KGQGEW Trigger: CCACTCTCCTTGGCCTTTCAAAGTGTTGGGATTACA...TTCATTGAAGTTCTCCCAATAAAGCTTTACAGCCTTCTGCAAAGAAGTCTTGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381709.6 |
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| CDS-3UTR CAA 90 bp | GCTGTAAAGCTTTATTGGGAGAACTTCAATGAAGAATTTTCCAACATAGGAGCAGCATTACTCACAGCCTaGAGGAGACTTGAGTTCCAG | + |
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Preference number: 5 (lower is better) Translates to: AVKLYWENFNEEFSNIGAALLTA*RRLEFQ Trigger: CTGGAACTCAAGTCTCCTCAAGGCTGTGAGTAATGC...TGCTCCTATGTTGGAAAATTCTTCATTGAAGTTCTCCCAATAAAGCTTTACAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381709.6 |
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| CDS-3UTR CAA 90 bp | CTGGATAGAAAATCAATACATGAGAATTATGCCTCTACACACAGCTCAAGGAGATTTCCACTATCACAATaGTATCCGGTAGATCTGCTC | + |
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Preference number: 5 (lower is better) Translates to: LDRKSIHENYASTHSSRRFPLSQ*YPVDLL Trigger: GAGCAGATCTACCGGATACAATTGTGATAGTGGAAA...TCTCCTTGAGCTGTGTGTAGAGGCATAATTCTCATGTATTGATTTTCTATCCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381709.6 |
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| CDS-3UTR CAA 90 bp | CTGGATAGAAAATCAATACATGAGAATTATGCCTCTACACACAGCTCAAGGAGAATTCACAAGACTTCTTaGCAGAAGGCTGTAAAGCTT | + |
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Preference number: 5 (lower is better) Translates to: LDRKSIHENYASTHSSRRIHKTS*QKAVKL Trigger: AAGCTTTACAGCCTTCTGCAAAGAAGTCTTGTGAAT...TCTCCTTGAGCTGTGTGTAGAGGCATAATTCTCATGTATTGATTTTCTATCCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000381700.10 ENST00000381709.6 |
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| CDS-3UTR CAA 90 bp | CACAAGACTTCTTTGCAGAAGGCTGTAAAGCTTTATTGGGAGAACTTCAATGAAATTCACAAGACTTCTTaGCAGAAGGCTGTAAAGCTT | + |
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Preference number: 5 (lower is better) Translates to: HKTSLQKAVKLYWENFNEIHKTS*QKAVKL Trigger: AAGCTTTACAGCCTTCTGCAAAGAAGTCTTGTGAAT...TTCATTGAAGTTCTCCCAATAAAGCTTTACAGCCTTCTGCAAAGAAGTCTTGTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000381700.10 ENST00000381709.6 |
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| CDS-3UTR CAA 90 bp | CACAAGACTTCTTTGCAGAAGGCTGTAAAGCTTTATTGGGAGAACTTCAATGAACACAGTCAAAGCACTTaGTTTTTCAGTCAGAACAAG | + |
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Preference number: 5 (lower is better) Translates to: HKTSLQKAVKLYWENFNEHSQST*FFSQNK Trigger: CTTGTTCTGACTGAAAAACAAAGTGCTTTGACTGTG...TTCATTGAAGTTCTCCCAATAAAGCTTTACAGCCTTCTGCAAAGAAGTCTTGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000381709.6 |
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| CDS-3UTR CAA 90 bp | CTGGATAGAAAATCAATACATGAGAATTATGCCTCTACACACAGCTCAAGGAGACTAAAACAGAATGGCTaGACTTACTCTGAAAAAGTC | + |
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Preference number: 5 (lower is better) Translates to: LDRKSIHENYASTHSSRRLKQNG*TYSEKV Trigger: GACTTTTTCAGAGTAAGTCAAGCCATTCTGTTTTAG...TCTCCTTGAGCTGTGTGTAGAGGCATAATTCTCATGTATTGATTTTCTATCCAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000381709.6 |
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| CDS-3UTR CAA 90 bp | GCTGTAAAGCTTTATTGGGAGAACTTCAATGAAGAATTTTCCAACATAGGAGCACAGATAGCTTTCAAATaGAAGAGGCATCTTCAGAGA | + |
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Preference number: 5 (lower is better) Translates to: AVKLYWENFNEEFSNIGAQIAFK*KRHLQR Trigger: TCTCTGAAGATGCCTCTTCAATTTGAAAGCTATCTG...TGCTCCTATGTTGGAAAATTCTTCATTGAAGTTCTCCCAATAAAGCTTTACAGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381709.6 |
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| CDS-3UTR CAA 90 bp | CACAAGACTTCTTTGCAGAAGGCTGTAAAGCTTTATTGGGAGAACTTCAATGAAAAAAGTGCAAGGGCTTaGAGCTTAGAAATTGAAATC | + |
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Preference number: 5 (lower is better) Translates to: HKTSLQKAVKLYWENFNEKSARA*SLEIEI Trigger: GATTTCAATTTCTAAGCTCAAAGCCCTTGCACTTTT...TTCATTGAAGTTCTCCCAATAAAGCTTTACAGCCTTCTGCAAAGAAGTCTTGTG 38% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENST00000381709.6 |
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