RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GADL1 (Homo sapiens)

Ensembl gene IDs: ENSG00000144644

Ensembl transcript IDs: ENST00000282538.10, ENST00000282538.9, ENST00000454381.3, ENST00000498387.1

Found 229 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CATATCTGGGTCACGCTGATGCAAGAGGTGGGTTCCCATAGCCTTTaGCAGCTCCACCCCTGTGGCTTTGCAGGGTATAGCCCCCATCAT +
Preference number: 1 (lower is better)
Translates to: HIWVTLMQEVGSHSL*QLHPCGFAGYSPHH
Trigger: ATGATGGGGGCTATACCCTGCAAAGCCACAGGGGTGGAGCTGCCAAAGGCTATGGGAACCCACCTCTTGCATCAGCGTGACCCAGATATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454381.3
3UTR TCA 90 bp GACTTATGCACTACCATGACAGCAGTATGGGGGAAACCACCCCCATaGTTCATATTATCTCCCACTGCGTCCCGCCCACAACATCTGGGA +
Preference number: 1 (lower is better)
Translates to: DLCTTMTAVWGKPPP*FILSPTASRPQHLG
Trigger: TCCCAGATGTTGTGGGCGGGACGCAGTGGGAGATAATATGAATCATGGGGGTGGTTTCCCCCATACTGCTGTCATGGTAGTGCATAAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000454381.3
3UTR CCA 90 bp CATCATGGCTGCTTTCACATGCTGGCACACAGTGTAAGCTGTCAGTaGACCTACCATTCTGGGGTCTGGAAGATGGTGGCCTTTGTCTCA +
Preference number: 1 (lower is better)
Translates to: HHGCFHMLAHSVSCQ*TYHSGVWKMVAFVS
Trigger: TGAGACAAAGGCCACCATCTTCCAGACCCCAGAATGGTAGGTCCACTGACAGCTTACACTGTGTGCCAGCATGTGAAAGCAGCCATGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454381.3
3UTR CCA 90 bp TTAATTGGACTTACAGTTCCACATGGCTGGGGAGGCCTCAATTCATaGCGGAAGCCGAAAGGCACTTCTTGCATGGCAGCAGCAAGAGAA +
Preference number: 1 (lower is better)
Translates to: LIGLTVPHGWGGLNS*RKPKGTSCMAAARE
Trigger: TTCTCTTGCTGCTGCCATGCAAGAAGTGCCTTTCGGCTTCCGCCATGAATTGAGGCCTCCCCAGCCATGTGGAACTGTAAGTCCAATTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454381.3
3UTR CCA 90 bp CCAAGACTGGGAAGAAAAAGGTTTAATTGGACTTACAGTTCCACATaGCTGGGGAGGCCTCAATTCATGGCGGAAGCCGAAAGGCACTTC +
Preference number: 1 (lower is better)
Translates to: PRLGRKRFNWTYSST*LGRPQFMAEAERHF
Trigger: GAAGTGCCTTTCGGCTTCCGCCATGAATTGAGGCCTCCCCAGCCATGTGGAACTGTAAGTCCAATTAAACCTTTTTCTTCCCAGTCTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454381.3
3UTR TCA 90 bp GCCCTCCTGATTGATCTTGGACTCTATACCTCACCTTGCCAAAAATaGGGGTCATTTGTGCATCTCAGTAGGCTAGGATCTTGGAGGGAG +
Preference number: 1 (lower is better)
Translates to: ALLIDLGLYTSPCQK*GSFVHLSRLGSWRE
Trigger: CTCCCTCCAAGATCCTAGCCTACTGAGATGCACAAATGACCCTCATTTTTGGCAAGGTGAGGTATAGAGTCCAAGATCAATCAGGAGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454381.3
3UTR GCA 90 bp AGCAGTATGGGGGAAACCACCCCCATGATTCATATTATCTCCCACTaGGTCCCGCCCACAACATCTGGGAATTATGGGAGTAGAATTCAA +
Preference number: 1 (lower is better)
Translates to: SSMGETTPMIHIISH*VPPTTSGNYGSRIQ
Trigger: TTGAATTCTACTCCCATAATTCCCAGATGTTGTGGGCGGGACGCAGTGGGAGATAATATGAATCATGGGGGTGGTTTCCCCCATACTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000454381.3
3UTR CCA 90 bp CTGGGTCTGATGGGAGGGACTGCCATGAAGACCTATGACATGCCCTaGAGACATTTTCCCTATTGTCTTGAGGATTATCATTCAGCTCCT +
Preference number: 1 (lower is better)
Translates to: LGLMGGTAMKTYDMP*RHFPYCLEDYHSAP
Trigger: AGGAGCTGAATGATAATCCTCAAGACAATAGGGAAAATGTCTCCAGGGCATGTCATAGGTCTTCATGGCAGTCCCTCCCATCAGACCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454381.3
3UTR TCA 90 bp GACACAGAGTCAAACAATACCACCTTCTCTTCATTAGATCTCAGTTaGAAGTCACTTCCTCCAAGGAGCCTCTGCCAGTGTGCCTCAAGA +
Preference number: 1 (lower is better)
Translates to: DTESNNTTFSSLDLS*KSLPPRSLCQCASR
Trigger: TCTTGAGGCACACTGGCAGAGGCTCCTTGGAGGAAGTGACTTTCAACTGAGATCTAATGAAGAGAAGGTGGTATTGTTTGACTCTGTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454381.3
3UTR TCA 90 bp TTCCAGCAGGGCAGTCAAATTCTAAAGTTCCAAAATGATCTCCTTTaGCTCCATGTCTCATATCTGGGTCACGCTGATGCAAGAGGTGGG +
Preference number: 1 (lower is better)
Translates to: FQQGSQILKFQNDLL*LHVSYLGHADARGG
Trigger: CCCACCTCTTGCATCAGCGTGACCCAGATATGAGACATGGAGTCAAAGGAGATCATTTTGGAACTTTAGAATTTGACTGCCCTGCTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454381.3
3UTR TCA 90 bp ATACCTCTTCTGAAATTTAGGTGGAGGTTCCCAAACCTCAATTCTTaGCTTGTGTGCCCACATGCTCAACACCACATGGAAGCTGCTAAG +
Preference number: 1 (lower is better)
Translates to: IPLLKFRWRFPNLNS*LVCPHAQHHMEAAK
Trigger: CTTAGCAGCTTCCATGTGGTGTTGAGCATGTGGGCACACAAGTCAAGAATTGAGGTTTGGGAACCTCCACCTAAATTTCAGAAGAGGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454381.3
3UTR GCA 90 bp TTTCTAATGTTTACTACAAGGCAAGTAAACATGGTGCTTCCACACTaGCTTTCCCTTCGAGACTTAAGCTGCCGCCACAACTCACAGATC +
Preference number: 1 (lower is better)
Translates to: FLMFTTRQVNMVLPH*LSLRDLSCRHNSQI
Trigger: GATCTGTGAGTTGTGGCGGCAGCTTAAGTCTCGAAGGGAAAGGCAGTGTGGAAGCACCATGTTTACTTGCCTTGTAGTAAACATTAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454381.3
3UTR CCA 90 bp CTGCTGATAAATACATACCCAAGACTGGGAAGAAAAAGGTTTAATTaGACTTACAGTTCCACATGGCTGGGGAGGCCTCAATTCATGGCG +
Preference number: 1 (lower is better)
Translates to: LLINTYPRLGRKRFN*TYSSTWLGRPQFMA
Trigger: CGCCATGAATTGAGGCCTCCCCAGCCATGTGGAACTGTAAGTCCAATTAAACCTTTTTCTTCCCAGTCTTGGGTATGTATTTATCAGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454381.3
3UTR TCA 90 bp GCAGCAAACTTTTATCTGGGCATCCAGGGGTTTCCATACCTCTTCTaGAATTTAGGTGGAGGTTCCCAAACCTCAATTCTTGACTTGTGT +
Preference number: 1 (lower is better)
Translates to: AANFYLGIQGFPYLF*NLGGGSQTSILDLC
Trigger: ACACAAGTCAAGAATTGAGGTTTGGGAACCTCCACCTAAATTTCAGAAGAGGTATGGAAACCCCTGGATGCCCAGATAAAAGTTTGCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454381.3
3UTR CCA 90 bp CAGTTCCCAACAAGTTCCTCATCTCCATCTGAGACTACCTCAGCCTaGACCTTATTGTTCGTATCACTATCAGCATTTTTGTCAAAGCCA +
Preference number: 1 (lower is better)
Translates to: QFPTSSSSPSETTSA*TLLFVSLSAFLSKP
Trigger: TGGCTTTGACAAAAATGCTGATAGTGATACGAACAATAAGGTCCAGGCTGAGGTAGTCTCAGATGGAGATGAGGAACTTGTTGGGAACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454381.3
3UTR GCA 90 bp GAATTTTCCTGTCTTCTTCTGAGCCCTTCAAACTATTTCAACCTCTaGCTGTTACCCAGTTCCAAAGTCGCTTCCACATTTTTGGGTATC +
Preference number: 1 (lower is better)
Translates to: EFSCLLLSPSNYFNL*LLPSSKVASTFLGI
Trigger: GATACCCAAAAATGTGGAAGCGACTTTGGAACTGGGTAACAGGCAGAGGTTGAAATAGTTTGAAGGGCTCAGAAGAAGACAGGAAAATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454381.3
3UTR-3UTR CCA 90 bp GTTTGGGGCTTGCACCCTCTGAAACCATGGGCTGAGCTGCACCTTGGCCCCTTTAATGGCTGGAGCAGCTaGGATGCAGGGCACCAAGTC +
Preference number: 2 (lower is better)
Translates to: VWGLHPLKPWAELHLGPFNGWSS*DAGHQV
Trigger: GACTTGGTGCCCTGCATCCCAGCTGCTCCAGCCATT...AAAGGGGCCAAGGTGCAGCTCAGCCCATGGTTTCAGAGGGTGCAAGCCCCAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454381.3
3UTR CAA 90 bp AAGAGGTGGGTTCCCATAGCCTTTGGCAGCTCCACCCCTGTGGCTTaGCAGGGTATAGCCCCCATCATGGCTGCTTTCACATGCTGGCAC +
Preference number: 2 (lower is better)
Translates to: KRWVPIAFGSSTPVA*QGIAPIMAAFTCWH
Trigger: GTGCCAGCATGTGAAAGCAGCCATGATGGGGGCTATACCCTGCAAAGCCACAGGGGTGGAGCTGCCAAAGGCTATGGGAACCCACCTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454381.3
3UTR-3UTR GCA 90 bp GGGACTCTGTGTGGGGGCTCTGACCCCACATTTCCCTTCCACACTGCCCTAGCAGAGCCTCTGCCAGTGTaGCTCAAGAACACACTAGAG +
Preference number: 2 (lower is better)
Translates to: GTLCGGSDPTFPFHTALAEPLPV*LKNTLE
Trigger: CTCTAGTGTGTTCTTGAGGCACACTGGCAGAGGCTC...TGCTAGGGCAGTGTGGAAGGGAAATGTGGGGTCAGAGCCCCCACACAGAGTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454381.3
3UTR-3UTR CCA 90 bp GTTTGGGGCTTGCACCCTCTGAAACCATGGGCTGAGCTGCACCTTGGCCCCTTTAGTAGGCTAGGATCTTaGAGGGAGGTGATAGGACTG +
Preference number: 2 (lower is better)
Translates to: VWGLHPLKPWAELHLGPFSRLGS*REVIGL
Trigger: CAGTCCTATCACCTCCCTCCAAGATCCTAGCCTACT...AAAGGGGCCAAGGTGCAGCTCAGCCCATGGTTTCAGAGGGTGCAAGCCCCAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454381.3
3UTR-3UTR CCA 90 bp GGGACTCTGTGTGGGGGCTCTGACCCCACATTTCCCTTCCACACTGCCCTAGCAAAGATGAGATCTGGGTaGGGACACAGAGTCAAACAA +
Preference number: 2 (lower is better)
Translates to: GTLCGGSDPTFPFHTALAKMRSG*GHRVKQ
Trigger: TTGTTTGACTCTGTGTCCCCACCCAGATCTCATCTT...TGCTAGGGCAGTGTGGAAGGGAAATGTGGGGTCAGAGCCCCCACACAGAGTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454381.3
3UTR-3UTR TCA 90 bp GTTTGGGGCTTGCACCCTCTGAAACCATGGGCTGAGCTGCACCTTGGCCCCTTTGAATACAATTCAAGATaGGATCTGGGTGGGGACACA +
Preference number: 2 (lower is better)
Translates to: VWGLHPLKPWAELHLGPFEYNSR*DLGGDT
Trigger: TGTGTCCCCACCCAGATCTCATCTTGAATTGTATTC...AAAGGGGCCAAGGTGCAGCTCAGCCCATGGTTTCAGAGGGTGCAAGCCCCAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000454381.3
3UTR-3UTR GCA 90 bp ATCTCCCACTGCGTCCCGCCCACAACATCTGGGAATTATGGGAGTAGAATTCAAACCAAGTCTGTAGGCTaGACACAGCTTGGGGACCCT +
Preference number: 2 (lower is better)
Translates to: ISHCVPPTTSGNYGSRIQTKSVG*TQLGDP
Trigger: AGGGTCCCCAAGCTGTGTGCAGCCTACAGACTTGGT...TTGAATTCTACTCCCATAATTCCCAGATGTTGTGGGCGGGACGCAGTGGGAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454381.3
3UTR-3UTR GCA 90 bp ATCTCCCACTGCGTCCCGCCCACAACATCTGGGAATTATGGGAGTAGAATTCAAAGCCCCCATCATGGCTaGTTTCACATGCTGGCACAC +
Preference number: 2 (lower is better)
Translates to: ISHCVPPTTSGNYGSRIQSPHHG*FHMLAH
Trigger: GTGTGCCAGCATGTGAAAGCAGCCATGATGGGGGCT...TTGAATTCTACTCCCATAATTCCCAGATGTTGTGGGCGGGACGCAGTGGGAGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454381.3
3UTR-3UTR GCA 90 bp GTTTGGGGCTTGCACCCTCTGAAACCATGGGCTGAGCTGCACCTTGGCCCCTTTAACAAGAGTCAACTTTaGTCCAGTTCCCAACAAGTT +
Preference number: 2 (lower is better)
Translates to: VWGLHPLKPWAELHLGPFNKSQL*SSSQQV
Trigger: AACTTGTTGGGAACTGGAGCAAAGTTGACTCTTGTT...AAAGGGGCCAAGGTGCAGCTCAGCCCATGGTTTCAGAGGGTGCAAGCCCCAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454381.3
3UTR-3UTR CCA 90 bp ATCTCCCACTGCGTCCCGCCCACAACATCTGGGAATTATGGGAGTAGAATTCAAACAGTTCCACATGGCTaGGGAGGCCTCAATTCATGG +
Preference number: 2 (lower is better)
Translates to: ISHCVPPTTSGNYGSRIQTVPHG*GGLNSW
Trigger: CCATGAATTGAGGCCTCCCCAGCCATGTGGAACTGT...TTGAATTCTACTCCCATAATTCCCAGATGTTGTGGGCGGGACGCAGTGGGAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454381.3
3UTR-3UTR CCA 90 bp AAGGCAAGTAAACATGGTGCTTCCACACTGCCTTTCCCTTCGAGACTTAAGCTGCCTTTTAGCAATGGCTaGAGCAGCTGGGATGCAGGG +
Preference number: 2 (lower is better)
Translates to: KASKHGASTLPFPSRLKLPFSNG*SSWDAG
Trigger: CCCTGCATCCCAGCTGCTCCAGCCATTGCTAAAAGG...CAGCTTAAGTCTCGAAGGGAAAGGCAGTGTGGAAGCACCATGTTTACTTGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454381.3
3UTR CAA 90 bp CTTAATGTCACATCCAGACTTTTGTGTCACCTCACATCCAGAGACTaGGGCCTGCTGCTCCTTCCACTTGGGTCATTCTTCTCCCCTTCT +
Preference number: 2 (lower is better)
Translates to: LNVTSRLLCHLTSRD*GLLLLPLGSFFSPS
Trigger: AGAAGGGGAGAAGAATGACCCAAGTGGAAGGAGCAGCAGGCCCAAGTCTCTGGATGTGAGGTGACACAAAAGTCTGGATGTGACATTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454381.3
3UTR-3UTR TCA 90 bp ACATCTGGGAATTATGGGAGTAGAATTCAAGATGAGATTTGGGTGAGGACACAGTCTGAAACCATGGGCTaGGCTGCACCTTGGCCCCTT +
Preference number: 2 (lower is better)
Translates to: TSGNYGSRIQDEIWVRTQSETMG*AAPWPL
Trigger: AAGGGGCCAAGGTGCAGCTCAGCCCATGGTTTCAGA...CTGTGTCCTCACCCAAATCTCATCTTGAATTCTACTCCCATAATTCCCAGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454381.3
3UTR-3UTR GCA 90 bp CCAAATCTCACGTGCTCACATTTCAAAACCAATCACACCTTCCCAACAGTCCCCCCGAAAGGCACTTCTTaGATGGCAGCAGCAAGAGAA +
Preference number: 2 (lower is better)
Translates to: PNLTCSHFKTNHTFPTVPPKGTS*MAAARE
Trigger: TTCTCTTGCTGCTGCCATGCAAGAAGTGCCTTTCGG...GGGGACTGTTGGGAAGGTGTGATTGGTTTTGAAATGTGAGCACGTGAGATTTGG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000454381.3
3UTR-3UTR GCA 90 bp AAGGCAAGTAAACATGGTGCTTCCACACTGCCTTTCCCTTCGAGACTTAAGCTGGGGTTACAGGACCCATaGAAGTCTGAATTCCAGCAG +
Preference number: 2 (lower is better)
Translates to: KASKHGASTLPFPSRLKLGLQDP*KSEFQQ
Trigger: CTGCTGGAATTCAGACTTGCATGGGTCCTGTAACCC...CAGCTTAAGTCTCGAAGGGAAAGGCAGTGTGGAAGCACCATGTTTACTTGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454381.3
3UTR-3UTR GCA 90 bp AAGGCAAGTAAACATGGTGCTTCCACACTGCCTTTCCCTTCGAGACTTAAGCTGCATATTATCTCCCACTaGGTCCCGCCCACAACATCT +
Preference number: 2 (lower is better)
Translates to: KASKHGASTLPFPSRLKLHIISH*VPPTTS
Trigger: AGATGTTGTGGGCGGGACGCAGTGGGAGATAATATG...CAGCTTAAGTCTCGAAGGGAAAGGCAGTGTGGAAGCACCATGTTTACTTGCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454381.3
3UTR-3UTR CCA 90 bp AAGGCAAGTAAACATGGTGCTTCCACACTGCCTTTCCCTTCGAGACTTAAGCTGACTTACAGTTCCACATaGCTGGGGAGGCCTCAATTC +
Preference number: 2 (lower is better)
Translates to: KASKHGASTLPFPSRLKLTYSST*LGRPQF
Trigger: GAATTGAGGCCTCCCCAGCCATGTGGAACTGTAAGT...CAGCTTAAGTCTCGAAGGGAAAGGCAGTGTGGAAGCACCATGTTTACTTGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454381.3
3UTR-3UTR CCA 90 bp ACATCTGGGAATTATGGGAGTAGAATTCAAGATGAGATTTGGGTGAGGACACAGCACCCTCTGAAACCATaGGCTGAGCTGCACCTTGGC +
Preference number: 2 (lower is better)
Translates to: TSGNYGSRIQDEIWVRTQHPLKP*AELHLG
Trigger: GCCAAGGTGCAGCTCAGCCCATGGTTTCAGAGGGTG...CTGTGTCCTCACCCAAATCTCATCTTGAATTCTACTCCCATAATTCCCAGATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454381.3
3UTR CAA 90 bp GGACACAGAGTCAAACAATACCACCTTCTCTTCATTAGATCTCAGTaGAAAGTCACTTCCTCCAAGGAGCCTCTGCCAGTGTGCCTCAAG +
Preference number: 2 (lower is better)
Translates to: GHRVKQYHLLFIRSQ*KVTSSKEPLPVCLK
Trigger: CTTGAGGCACACTGGCAGAGGCTCCTTGGAGGAAGTGACTTTCAACTGAGATCTAATGAAGAGAAGGTGGTATTGTTTGACTCTGTGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454381.3
3UTR CAA 90 bp CACAGATCATTTGCTTTTCAGGTCCTTAATGTCACATCCAGACTTTaGTGTCACCTCACATCCAGAGACTTGGGCCTGCTGCTCCTTCCA +
Preference number: 2 (lower is better)
Translates to: HRSFAFQVLNVTSRL*CHLTSRDLGLLLLP
Trigger: TGGAAGGAGCAGCAGGCCCAAGTCTCTGGATGTGAGGTGACACAAAAGTCTGGATGTGACATTAAGGACCTGAAAAGCAAATGATCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454381.3
3UTR-3UTR GCA 90 bp AAGGCAAGTAAACATGGTGCTTCCACACTGCCTTTCCCTTCGAGACTTAAGCTGCAAACTATGTCATTCTaGCCCTTGCCCCTCCAAATC +
Preference number: 2 (lower is better)
Translates to: KASKHGASTLPFPSRLKLQTMSF*PLPLQI
Trigger: GATTTGGAGGGGCAAGGGGCAGAATGACATAGTTTG...CAGCTTAAGTCTCGAAGGGAAAGGCAGTGTGGAAGCACCATGTTTACTTGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454381.3
3UTR-3UTR TCA 90 bp AAGGCAAGTAAACATGGTGCTTCCACACTGCCTTTCCCTTCGAGACTTAAGCTGTCACCTTGCCAAAAATaGGGGTCATTTGTGCATCTC +
Preference number: 2 (lower is better)
Translates to: KASKHGASTLPFPSRLKLSPCQK*GSFVHL
Trigger: GAGATGCACAAATGACCCTCATTTTTGGCAAGGTGA...CAGCTTAAGTCTCGAAGGGAAAGGCAGTGTGGAAGCACCATGTTTACTTGCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454381.3
3UTR-3UTR TCA 90 bp ATCTCCCACTGCGTCCCGCCCACAACATCTGGGAATTATGGGAGTAGAATTCAAGTCTCTAGGAAGTTCTaGATTTTCCTGTCTTCTTCT +
Preference number: 2 (lower is better)
Translates to: ISHCVPPTTSGNYGSRIQVSRKF*IFLSSS
Trigger: AGAAGAAGACAGGAAAATTCAGAACTTCCTAGAGAC...TTGAATTCTACTCCCATAATTCCCAGATGTTGTGGGCGGGACGCAGTGGGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454381.3
3UTR-3UTR TCA 90 bp AAGGCAAGTAAACATGGTGCTTCCACACTGCCTTTCCCTTCGAGACTTAAGCTGTTTCCATACCTCTTCTaGAATTTAGGTGGAGGTTCC +
Preference number: 2 (lower is better)
Translates to: KASKHGASTLPFPSRLKLFPYLF*NLGGGS
Trigger: GGAACCTCCACCTAAATTTCAGAAGAGGTATGGAAA...CAGCTTAAGTCTCGAAGGGAAAGGCAGTGTGGAAGCACCATGTTTACTTGCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454381.3
3UTR-3UTR CCA 90 bp AAACCTAGGACCAGGGTCAGAGATAGAATTAAAATCACCCACTCTCAGGAGAAATTGCTGGGCCTGGACTaGGAGTATTCCCTATTTCTC +
Preference number: 2 (lower is better)
Translates to: KPRTRVRDRIKITHSQEKLLGLD*EYSLFL
Trigger: GAGAAATAGGGAATACTCCCAGTCCAGGCCCAGCAA...TTTCTCCTGAGAGTGGGTGATTTTAATTCTATCTCTGACCCTGGTCCTAGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282538.9
3UTR-3UTR TCA 90 bp CCAAATCTCACGTGCTCACATTTCAAAACCAATCACACCTTCCCAACAGTCCCCCAAAATGATCTCCTTTaGCTCCATGTCTCATATCTG +
Preference number: 2 (lower is better)
Translates to: PNLTCSHFKTNHTFPTVPQNDLL*LHVSYL
Trigger: CAGATATGAGACATGGAGTCAAAGGAGATCATTTTG...GGGGACTGTTGGGAAGGTGTGATTGGTTTTGAAATGTGAGCACGTGAGATTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000454381.3
3UTR-3UTR CCA 90 bp AAGGCAAGTAAACATGGTGCTTCCACACTGCCTTTCCCTTCGAGACTTAAGCTGCTTCTGAAATTTAGGTaGAGGTTCCCAAACCTCAAT +
Preference number: 2 (lower is better)
Translates to: KASKHGASTLPFPSRLKLLLKFR*RFPNLN
Trigger: ATTGAGGTTTGGGAACCTCCACCTAAATTTCAGAAG...CAGCTTAAGTCTCGAAGGGAAAGGCAGTGTGGAAGCACCATGTTTACTTGCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454381.3
3UTR-3UTR TCA 90 bp AAGGCAAGTAAACATGGTGCTTCCACACTGCCTTTCCCTTCGAGACTTAAGCTGTCTAAAGTTCCAAAATaGTCTCCTTTGACTCCATGT +
Preference number: 2 (lower is better)
Translates to: KASKHGASTLPFPSRLKLSKVPK*SPLTPC
Trigger: ACATGGAGTCAAAGGAGATCATTTTGGAACTTTAGA...CAGCTTAAGTCTCGAAGGGAAAGGCAGTGTGGAAGCACCATGTTTACTTGCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454381.3
3UTR-3UTR GCA 90 bp AAACCTAGGACCAGGGTCAGAGATAGAATTAAAATCACCCACTCTCAGGAGAAATCTCATCAGAAGGGCTaGAATCTACTGTGTATCTCC +
Preference number: 2 (lower is better)
Translates to: KPRTRVRDRIKITHSQEKSHQKG*NLLCIS
Trigger: GGAGATACACAGTAGATTGCAGCCCTTCTGATGAGA...TTTCTCCTGAGAGTGGGTGATTTTAATTCTATCTCTGACCCTGGTCCTAGGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282538.9
3UTR-3UTR GCA 90 bp CTGACATTTCAAAGCTTAGGAAAGGGAATGTTGTACAACCCTGGACTTCATTGTTTAGCATTTTGGTTTTaGTGGGCCTGGACTGGGAGT +
Preference number: 2 (lower is better)
Translates to: LTFQSLGKGMLYNPGLHCLAFWF*WAWTGS
Trigger: ACTCCCAGTCCAGGCCCAGCAAAACCAAAATGCTAA...ACAATGAAGTCCAGGGTTGTACAACATTCCCTTTCCTAAGCTTTGAAATGTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282538.9
3UTR CAA 90 bp ACAAGTTCCTCATCTCCATCTGAGACTACCTCAGCCTGGACCTTATaGTTCGTATCACTATCAGCATTTTTGTCAAAGCCATTCAACAAG +
Preference number: 2 (lower is better)
Translates to: TSSSSPSETTSAWTL*FVSLSAFLSKPFNK
Trigger: CTTGTTGAATGGCTTTGACAAAAATGCTGATAGTGATACGAACAATAAGGTCCAGGCTGAGGTAGTCTCAGATGGAGATGAGGAACTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454381.3
3UTR-3UTR TCA 90 bp CTGCCTGTTACCCAGTTCCAAAGTCGCTTCCACATTTTTGGGTATCTTTTCAGCACACTTAGTAGGTACTaGGAAAATGTGTATTGGATG +
Preference number: 2 (lower is better)
Translates to: LPVTQFQSRFHIFGYLFSTLSRY*ENVYWM
Trigger: CATCCAATACACATTTTCTCAGTACCTACTAAGTGT...GCTGAAAAGATACCCAAAAATGTGGAAGCGACTTTGGAACTGGGTAACAGGCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000454381.3
3UTR CAA 90 bp ACTACCTCAGCCTGGACCTTATTGTTCGTATCACTATCAGCATTTTaGTCAAAGCCATTCAACAAGTCTCTAGGAAGTTCTGAATTTTCC +
Preference number: 2 (lower is better)
Translates to: TTSAWTLLFVSLSAF*SKPFNKSLGSSEFS
Trigger: GGAAAATTCAGAACTTCCTAGAGACTTGTTGAATGGCTTTGACAAAAATGCTGATAGTGATACGAACAATAAGGTCCAGGCTGAGGTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454381.3
3UTR-3UTR CCA 90 bp CCCACACCTATGAATTCTGTCAATTTCTTAGTTAAACAAAACTCTCCTAGAAACGCATTTTGGTTTTGCTaGGCCTGGACTGGGAGTATT +
Preference number: 2 (lower is better)
Translates to: PTPMNSVNFLVKQNSPRNAFWFC*AWTGSI
Trigger: AATACTCCCAGTCCAGGCCCAGCAAAACCAAAATGC...GTTTCTAGGAGAGTTTTGTTTAACTAAGAAATTGACAGAATTCATAGGTGTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000282538.9
3UTR-3UTR CCA 90 bp GGGAATGTTGTACAACCCTGGACTTCATTGTGTTTATTCCCTATGAGGCACAGAAATCCAGAACCTACATaGTACTTACTAAACTCTCTT +
Preference number: 2 (lower is better)
Translates to: GNVVQPWTSLCLFPMRHRNPEPT*YLLNSL
Trigger: AAGAGAGTTTAGTAAGTACCATGTAGGTTCTGGATT...TCTGTGCCTCATAGGGAATAAACACAATGAAGTCCAGGGTTGTACAACATTCCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282538.9
3UTR CAA 90 bp TTTTCAAAGACTGGCTCAGAGGCTTCTGAAATATTAGATATCCCTTaGCTGGCAAAACATCAGAGTGGGTATTCGATCATTACAAGGTTT +
Preference number: 2 (lower is better)
Translates to: FSKTGSEASEILDIP*LAKHQSGYSIITRF
Trigger: AAACCTTGTAATGATCGAATACCCACTCTGATGTTTTGCCAGCAAAGGGATATCTAATATTTCAGAAGCCTCTGAGCCAGTCTTTGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282538.9
3UTR-3UTR CCA 90 bp TGGGTATTCGATCATTACAAGGTTTTTCTTAAACCAGTGTTTCTCGGATTTTACCATTGCTTAGCATTTTaGTTTTGCTGGGCCTGGACT +
Preference number: 2 (lower is better)
Translates to: WVFDHYKVFLKPVFLGFYHCLAF*FCWAWT
Trigger: AGTCCAGGCCCAGCAAAACCAAAATGCTAAGCAATG...GTAAAATCCGAGAAACACTGGTTTAAGAAAAACCTTGTAATGATCGAATACCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000282538.9
3UTR-3UTR GCA 90 bp AATCTTATCTTGGTGAACTCTACACCCACACCTATGAATTCTGTCAATTTCTTAGAAAGCCTGAGAATCTaGATTTTTAGCAAGTTCCCA +
Preference number: 2 (lower is better)
Translates to: NLILVNSTPTPMNSVNFLESLRI*IFSKFP
Trigger: TGGGAACTTGCTAAAAATGCAGATTCTCAGGCTTTC...TAAGAAATTGACAGAATTCATAGGTGTGGGTGTAGAGTTCACCAAGATAAGATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000282538.9
3UTR-3UTR CCA 90 bp CATACCCGAGACTGGGAAGAAAAAGGTTTAATTGAACTTATAGTTCCACAGTTCAGAAAAAGGTTTAATTaGACTTACAGTTCCACATGG +
Preference number: 2 (lower is better)
Translates to: HTRDWEEKGLIELIVPQFRKRFN*TYSSTW
Trigger: CCATGTGGAACTGTAAGTCCAATTAAACCTTTTTCT...GAACTGTGGAACTATAAGTTCAATTAAACCTTTTTCTTCCCAGTCTCGGGTATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000454381.3
3UTR-3UTR GCA 90 bp AATCTTATCTTGGTGAACTCTACACCCACACCTATGAATTCTGTCAATTTCTTAGTCCTTAAATATTTGTaGTGCAGATGCCATAGTTGT +
Preference number: 2 (lower is better)
Translates to: NLILVNSTPTPMNSVNFLVLKYL*CRCHSC
Trigger: ACAACTATGGCATCTGCAGCACAAATATTTAAGGAC...TAAGAAATTGACAGAATTCATAGGTGTGGGTGTAGAGTTCACCAAGATAAGATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282538.9
3UTR-3UTR CCA 90 bp AATCTTATCTTGGTGAACTCTACACCCACACCTATGAATTCTGTCAATTTCTTAAATGTTGTACAACCCTaGACTTCATTGTGTTTATTC +
Preference number: 2 (lower is better)
Translates to: NLILVNSTPTPMNSVNFLNVVQP*TSLCLF
Trigger: GAATAAACACAATGAAGTCCAGGGTTGTACAACATT...TAAGAAATTGACAGAATTCATAGGTGTGGGTGTAGAGTTCACCAAGATAAGATT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282538.9
3UTR GCA 72 bp GGAGCAGCTGGGATGCAGGGCACCAAGTCTGTAGGCTaGACACAGCTTGGGGACCCTGTGTGTCCCCAGGCC +
Preference number: 3 (lower is better)
Translates to: GAAGMQGTKSVG*TQLGDPVCPQA
Trigger: GGCCTGGGGACACACAGGGTCCCCAAGCTGTGTGCAGCCTACAGACTTGGTGCCCTGCATCCCAGCTGCTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454381.3
3UTR CCA 72 bp GGGCTGAGCTGCACCTTGGCCCCTTTTAGCAATGGCTaGAGCAGCTGGGATGCAGGGCACCAAGTCTGTAGG +
Preference number: 3 (lower is better)
Translates to: GLSCTLAPFSNG*SSWDAGHQVCR
Trigger: CCTACAGACTTGGTGCCCTGCATCCCAGCTGCTCCAGCCATTGCTAAAAGGGGCCAAGGTGCAGCTCAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454381.3
3UTR CCA 72 bp TGCACCTTGGCCCCTTTTAGCAATGGCTGGAGCAGCTaGGATGCAGGGCACCAAGTCTGTAGGCTGCACACA +
Preference number: 3 (lower is better)
Translates to: CTLAPFSNGWSS*DAGHQVCRLHT
Trigger: TGTGTGCAGCCTACAGACTTGGTGCCCTGCATCCCAGCTGCTCCAGCCATTGCTAAAAGGGGCCAAGGTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454381.3
3UTR CCA 72 bp GTCACGCTGATGCAAGAGGTGGGTTCCCATAGCCTTTaGCAGCTCCACCCCTGTGGCTTTGCAGGGTATAGC +
Preference number: 3 (lower is better)
Translates to: VTLMQEVGSHSL*QLHPCGFAGYS
Trigger: GCTATACCCTGCAAAGCCACAGGGGTGGAGCTGCCAAAGGCTATGGGAACCCACCTCTTGCATCAGCGTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454381.3
3UTR CCA 72 bp GTCAGTGGACCTACCATTCTGGGGTCTGGAAGATGGTaGCCTTTGTCTCATAGCTCCACTAGGCAGTGCCCC +
Preference number: 3 (lower is better)
Translates to: VSGPTILGSGRW*PLSHSSTRQCP
Trigger: GGGGCACTGCCTAGTGGAGCTATGAGACAAAGGCCACCATCTTCCAGACCCCAGAATGGTAGGTCCACTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454381.3
3UTR TCA 72 bp ACATGGAAGCTGCTAAGGTTTGGGGCTTGCACCCTCTaGAACCATGGGCTGAGCTGCACCTTGGCCCCTTTT +
Preference number: 3 (lower is better)
Translates to: TWKLLRFGACTL*NHGLSCTLAPF
Trigger: AAAAGGGGCCAAGGTGCAGCTCAGCCCATGGTTTCAGAGGGTGCAAGCCCCAAACCTTAGCAGCTTCCATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454381.3
3UTR GCA 72 bp CCCTGTGGCTTTGCAGGGTATAGCCCCCATCATGGCTaGTTTCACATGCTGGCACACAGTGTAAGCTGTCAG +
Preference number: 3 (lower is better)
Translates to: PCGFAGYSPHHG*FHMLAHSVSCQ
Trigger: CTGACAGCTTACACTGTGTGCCAGCATGTGAAAGCAGCCATGATGGGGGCTATACCCTGCAAAGCCACAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454381.3
3UTR CCA 72 bp CTTACAGTTCCACATGGCTGGGGAGGCCTCAATTCATaGCGGAAGCCGAAAGGCACTTCTTGCATGGCAGCA +
Preference number: 3 (lower is better)
Translates to: LTVPHGWGGLNS*RKPKGTSCMAA
Trigger: TGCTGCCATGCAAGAAGTGCCTTTCGGCTTCCGCCATGAATTGAGGCCTCCCCAGCCATGTGGAACTGTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454381.3
3UTR CCA 72 bp CCACATGCTCAACACCACATGGAAGCTGCTAAGGTTTaGGGCTTGCACCCTCTGAAACCATGGGCTGAGCTG +
Preference number: 3 (lower is better)
Translates to: PHAQHHMEAAKV*GLHPLKPWAEL
Trigger: CAGCTCAGCCCATGGTTTCAGAGGGTGCAAGCCCCAAACCTTAGCAGCTTCCATGTGGTGTTGAGCATGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454381.3
3UTR CCA 72 bp GCTGTCAGTGGACCTACCATTCTGGGGTCTGGAAGATaGTGGCCTTTGTCTCATAGCTCCACTAGGCAGTGC +
Preference number: 3 (lower is better)
Translates to: AVSGPTILGSGR*WPLSHSSTRQC
Trigger: GCACTGCCTAGTGGAGCTATGAGACAAAGGCCACCATCTTCCAGACCCCAGAATGGTAGGTCCACTGACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454381.3
3UTR CCA 72 bp AGTTCCCTGAGGCTGGAGGAGGCCTCAGAATCATGGTaGGAGGCAAAAGGCACTTCTTACGTGGAAGTGGCA +
Preference number: 3 (lower is better)
Translates to: SSLRLEEASESW*EAKGTSYVEVA
Trigger: TGCCACTTCCACGTAAGAAGTGCCTTTTGCCTCCCACCATGATTCTGAGGCCTCCTCCAGCCTCAGGGAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454381.3
3UTR CCA 72 bp TGCTTTCACATGCTGGCACACAGTGTAAGCTGTCAGTaGACCTACCATTCTGGGGTCTGGAAGATGGTGGCC +
Preference number: 3 (lower is better)
Translates to: CFHMLAHSVSCQ*TYHSGVWKMVA
Trigger: GGCCACCATCTTCCAGACCCCAGAATGGTAGGTCCACTGACAGCTTACACTGTGTGCCAGCATGTGAAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454381.3
3UTR TCA 72 bp TCTCCTTTGACTCCATGTCTCATATCTGGGTCACGCTaGTGCAAGAGGTGGGTTCCCATAGCCTTTGGCAGC +
Preference number: 3 (lower is better)
Translates to: SPLTPCLISGSR*CKRWVPIAFGS
Trigger: GCTGCCAAAGGCTATGGGAACCCACCTCTTGCATCAGCGTGACCCAGATATGAGACATGGAGTCAAAGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454381.3
3UTR TCA 72 bp ACTACCATGACAGCAGTATGGGGGAAACCACCCCCATaGTTCATATTATCTCCCACTGCGTCCCGCCCACAA +
Preference number: 3 (lower is better)
Translates to: TTMTAVWGKPPP*FILSPTASRPQ
Trigger: TTGTGGGCGGGACGCAGTGGGAGATAATATGAATCATGGGGGTGGTTTCCCCCATACTGCTGTCATGGTAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000454381.3
3UTR GCA 72 bp GGCCTCAATTCATGGCGGAAGCCGAAAGGCACTTCTTaGATGGCAGCAGCAAGAGAAAACGAGGAAGAATGC +
Preference number: 3 (lower is better)
Translates to: GLNSWRKPKGTS*MAAARENEEEC
Trigger: GCATTCTTCCTCGTTTTCTCTTGCTGCTGCCATGCAAGAAGTGCCTTTCGGCTTCCGCCATGAATTGAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454381.3
3UTR CCA 72 bp GGCACACAGTGTAAGCTGTCAGTGGACCTACCATTCTaGGGTCTGGAAGATGGTGGCCTTTGTCTCATAGCT +
Preference number: 3 (lower is better)
Translates to: GTQCKLSVDLPF*GLEDGGLCLIA
Trigger: AGCTATGAGACAAAGGCCACCATCTTCCAGACCCCAGAATGGTAGGTCCACTGACAGCTTACACTGTGTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454381.3
3UTR-3UTR CAA 90 bp AAGGCAAGTAAACATGGTGCTTCCACACTGCCTTTCCCTTCGAGACTTAAGCTGGCCGAAAGGCACTTCTaGCATGGCAGCAGCAAGAGA +
Preference number: 3 (lower is better)
Translates to: KASKHGASTLPFPSRLKLAERHF*HGSSKR
Trigger: TCTCTTGCTGCTGCCATGCAAGAAGTGCCTTTCGGC...CAGCTTAAGTCTCGAAGGGAAAGGCAGTGTGGAAGCACCATGTTTACTTGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454381.3
3UTR CCA 72 bp CATCCAGACTTTTGTGTCACCTCACATCCAGAGACTTaGGCCTGCTGCTCCTTCCACTTGGGTCATTCTTCT +
Preference number: 3 (lower is better)
Translates to: HPDFCVTSHPET*ACCSFHLGHSS
Trigger: AGAAGAATGACCCAAGTGGAAGGAGCAGCAGGCCCAAGTCTCTGGATGTGAGGTGACACAAAAGTCTGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454381.3
3UTR TCA 72 bp AAAACACAGAATACTGGGCCTCACCCCCAGAGCTTCTaGTCCAGTTGGTCTAGAGAAAGCCTGAGAATCTGC +
Preference number: 3 (lower is better)
Translates to: KTQNTGPHPQSF*SSWSRESLRIC
Trigger: GCAGATTCTCAGGCTTTCTCTAGACCAACTGGATCAGAAGCTCTGGGGGTGAGGCCCAGTATTCTGTGTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000282538.9
3UTR CCA 72 bp GAAAAAGGTTTAATTGGACTTACAGTTCCACATGGCTaGGGAGGCCTCAATTCATGGCGGAAGCCGAAAGGC +
Preference number: 3 (lower is better)
Translates to: EKGLIGLTVPHG*GGLNSWRKPKG
Trigger: GCCTTTCGGCTTCCGCCATGAATTGAGGCCTCCCCAGCCATGTGGAACTGTAAGTCCAATTAAACCTTTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454381.3
3UTR-3UTR CAA 90 bp AAGGCAAGTAAACATGGTGCTTCCACACTGCCTTTCCCTTCGAGACTTAAGCTGCCCAAACCTCAATTCTaGACTTGTGTGCCCACATGC +
Preference number: 3 (lower is better)
Translates to: KASKHGASTLPFPSRLKLPKPQF*TCVPTC
Trigger: GCATGTGGGCACACAAGTCAAGAATTGAGGTTTGGG...CAGCTTAAGTCTCGAAGGGAAAGGCAGTGTGGAAGCACCATGTTTACTTGCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454381.3
3UTR TCA 72 bp CCAGTGTGCCTCAAGAACACACTAGAGAAGCCCTCCTaGTTGATCTTGGACTCTATACCTCACCTTGCCAAA +
Preference number: 3 (lower is better)
Translates to: PVCLKNTLEKPS*LILDSIPHLAK
Trigger: TTTGGCAAGGTGAGGTATAGAGTCCAAGATCAATCAGGAGGGCTTCTCTAGTGTGTTCTTGAGGCACACTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454381.3
3UTR GCA 72 bp TTTACTACAAGGCAAGTAAACATGGTGCTTCCACACTaGCTTTCCCTTCGAGACTTAAGCTGCCGCCACAAC +
Preference number: 3 (lower is better)
Translates to: FTTRQVNMVLPH*LSLRDLSCRHN
Trigger: GTTGTGGCGGCAGCTTAAGTCTCGAAGGGAAAGGCAGTGTGGAAGCACCATGTTTACTTGCCTTGTAGTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454381.3
3UTR CCA 72 bp GGAAGAAAAAGGTTTAATTGGACTTACAGTTCCACATaGCTGGGGAGGCCTCAATTCATGGCGGAAGCCGAA +
Preference number: 3 (lower is better)
Translates to: GRKRFNWTYSST*LGRPQFMAEAE
Trigger: TTCGGCTTCCGCCATGAATTGAGGCCTCCCCAGCCATGTGGAACTGTAAGTCCAATTAAACCTTTTTCTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454381.3
3UTR TCA 72 bp TTTGCTCCAGTTCCCAACAAGTTCCTCATCTCCATCTaGGACTACCTCAGCCTGGACCTTATTGTTCGTATC +
Preference number: 3 (lower is better)
Translates to: FAPVPNKFLISI*DYLSLDLIVRI
Trigger: GATACGAACAATAAGGTCCAGGCTGAGGTAGTCTCAGATGGAGATGAGGAACTTGTTGGGAACTGGAGCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454381.3
3UTR-3UTR CAA 90 bp CTGACATTTCAAAGCTTAGGAAAGGGAATGTTGTACAACCCTGGACTTCATTGTCTTAGCATTTTGGTTTaGCTGGGCCTGGACTGGGAG +
Preference number: 3 (lower is better)
Translates to: LTFQSLGKGMLYNPGLHCLSILV*LGLDWE
Trigger: CTCCCAGTCCAGGCCCAGCAAAACCAAAATGCTAAG...ACAATGAAGTCCAGGGTTGTACAACATTCCCTTTCCTAAGCTTTGAAATGTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282538.9
3UTR-3UTR CAA 90 bp CATACCCGAGACTGGGAAGAAAAAGGTTTAATTGAACTTATAGTTCCACAGTTCGCTAAGGTTTGGGGCTaGCACCCTCTGAAACCATGG +
Preference number: 3 (lower is better)
Translates to: HTRDWEEKGLIELIVPQFAKVWG*HPLKPW
Trigger: CCATGGTTTCAGAGGGTGCAAGCCCCAAACCTTAGC...GAACTGTGGAACTATAAGTTCAATTAAACCTTTTTCTTCCCAGTCTCGGGTATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454381.3
3UTR TCA 72 bp CACAACACCTGGGAATTACGGGAATACAATTCAAGATaGGATCTGGGTGGGGACACAGAGTCAAACAATACC +
Preference number: 3 (lower is better)
Translates to: HNTWELREYNSR*DLGGDTESNNT
Trigger: GGTATTGTTTGACTCTGTGTCCCCACCCAGATCTCATCTTGAATTGTATTCCCGTAATTCCCAGGTGTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454381.3
3UTR TCA 72 bp CTGAAATTTAGGTGGAGGTTCCCAAACCTCAATTCTTaGCTTGTGTGCCCACATGCTCAACACCACATGGAA +
Preference number: 3 (lower is better)
Translates to: LKFRWRFPNLNS*LVCPHAQHHME
Trigger: TTCCATGTGGTGTTGAGCATGTGGGCACACAAGTCAAGAATTGAGGTTTGGGAACCTCCACCTAAATTTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454381.3
3UTR GCA 72 bp GGACTGGGAGTATTCCCTATTTCTCATCAGAAGGGCTaGAATCTACTGTGTATCTCCAAGATGTTCTGGATC +
Preference number: 3 (lower is better)
Translates to: GLGVFPISHQKG*NLLCISKMFWI
Trigger: GATCCAGAACATCTTGGAGATACACAGTAGATTGCAGCCCTTCTGATGAGAAATAGGGAATACTCCCAGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282538.9
3UTR CCA 72 bp CCTGGGAATTACGGGAATACAATTCAAGATGAGATCTaGGTGGGGACACAGAGTCAAACAATACCACCTTCT +
Preference number: 3 (lower is better)
Translates to: PGNYGNTIQDEI*VGTQSQTIPPS
Trigger: AGAAGGTGGTATTGTTTGACTCTGTGTCCCCACCCAGATCTCATCTTGAATTGTATTCCCGTAATTCCCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454381.3
3UTR CCA 72 bp ATGGGAGGGACTGCCATGAAGACCTATGACATGCCCTaGAGACATTTTCCCTATTGTCTTGAGGATTATCAT +
Preference number: 3 (lower is better)
Translates to: MGGTAMKTYDMP*RHFPYCLEDYH
Trigger: ATGATAATCCTCAAGACAATAGGGAAAATGTCTCCAGGGCATGTCATAGGTCTTCATGGCAGTCCCTCCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454381.3
3UTR-3UTR CAA 90 bp AAACCTAGGACCAGGGTCAGAGATAGAATTAAAATCACCCACTCTCAGGAGAAATCATTGCTTAGCATTTaGGTTTTGCTGGGCCTGGAC +
Preference number: 3 (lower is better)
Translates to: KPRTRVRDRIKITHSQEKSLLSI*VLLGLD
Trigger: GTCCAGGCCCAGCAAAACCAAAATGCTAAGCAATGA...TTTCTCCTGAGAGTGGGTGATTTTAATTCTATCTCTGACCCTGGTCCTAGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282538.9
3UTR-3UTR CAA 90 bp ATTCTTGACTTGTGTGCCCACATGCTCAACACCACATGGAAGCTGCTAAGGTTTCATCCAAGTCACCTCTaGAATGCTTTGCTGCTTAAA +
Preference number: 3 (lower is better)
Translates to: ILDLCAHMLNTTWKLLRFHPSHL*NALLLK
Trigger: TTTAAGCAGCAAAGCATTCAAGAGGTGACTTGGATG...AAACCTTAGCAGCTTCCATGTGGTGTTGAGCATGTGGGCACACAAGTCAAGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454381.3
3UTR GCA 72 bp TGTCTTCTTCTGAGCCCTTCAAACTATTTCAACCTCTaGCTGTTACCCAGTTCCAAAGTCGCTTCCACATTT +
Preference number: 3 (lower is better)
Translates to: CLLLSPSNYFNL*LLPSSKVASTF
Trigger: AAATGTGGAAGCGACTTTGGAACTGGGTAACAGGCAGAGGTTGAAATAGTTTGAAGGGCTCAGAAGAAGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454381.3
3UTR GCA 72 bp CCAGTCTGTTTGCTAAAACGTAACAAGAGTCAACTTTaGTCCAGTTCCCAACAAGTTCCTCATCTCCATCTG +
Preference number: 3 (lower is better)
Translates to: PVCLLKRNKSQL*SSSQQVPHLHL
Trigger: CAGATGGAGATGAGGAACTTGTTGGGAACTGGAGCAAAGTTGACTCTTGTTACGTTTTAGCAAACAGACTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454381.3
3UTR CCA 72 bp AATACATACCCAAGACTGGGAAGAAAAAGGTTTAATTaGACTTACAGTTCCACATGGCTGGGGAGGCCTCAA +
Preference number: 3 (lower is better)
Translates to: NTYPRLGRKRFN*TYSSTWLGRPQ
Trigger: TTGAGGCCTCCCCAGCCATGTGGAACTGTAAGTCCAATTAAACCTTTTTCTTCCCAGTCTTGGGTATGTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454381.3
3UTR-3UTR CAA 90 bp CCAAATCTCACGTGCTCACATTTCAAAACCAATCACACCTTCCCAACAGTCCCCATTTTCCCTATTGTCTaGAGGATTATCATTCAGCTC +
Preference number: 3 (lower is better)
Translates to: PNLTCSHFKTNHTFPTVPIFPIV*RIIIQL
Trigger: GAGCTGAATGATAATCCTCAAGACAATAGGGAAAAT...GGGGACTGTTGGGAAGGTGTGATTGGTTTTGAAATGTGAGCACGTGAGATTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000454381.3
3UTR TCA 72 bp ATTGATCTTGGACTCTATACCTCACCTTGCCAAAAATaGGGGTCATTTGTGCATCTCAGTAGGCTAGGATCT +
Preference number: 3 (lower is better)
Translates to: IDLGLYTSPCQK*GSFVHLSRLGS
Trigger: AGATCCTAGCCTACTGAGATGCACAAATGACCCTCATTTTTGGCAAGGTGAGGTATAGAGTCCAAGATCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454381.3
3UTR TCA 72 bp TTTTATCTGGGCATCCAGGGGTTTCCATACCTCTTCTaGAATTTAGGTGGAGGTTCCCAAACCTCAATTCTT +
Preference number: 3 (lower is better)
Translates to: FYLGIQGFPYLF*NLGGGSQTSIL
Trigger: AAGAATTGAGGTTTGGGAACCTCCACCTAAATTTCAGAAGAGGTATGGAAACCCCTGGATGCCCAGATAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454381.3
3UTR CCA 72 bp ACAAGTTCCTCATCTCCATCTGAGACTACCTCAGCCTaGACCTTATTGTTCGTATCACTATCAGCATTTTTG +
Preference number: 3 (lower is better)
Translates to: TSSSSPSETTSA*TLLFVSLSAFL
Trigger: CAAAAATGCTGATAGTGATACGAACAATAAGGTCCAGGCTGAGGTAGTCTCAGATGGAGATGAGGAACTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454381.3
3UTR TCA 72 bp ATTCCAGCAGGGCAGTCAAATTCTAAAGTTCCAAAATaGTCTCCTTTGACTCCATGTCTCATATCTGGGTCA +
Preference number: 3 (lower is better)
Translates to: IPAGQSNSKVPK*SPLTPCLISGS
Trigger: TGACCCAGATATGAGACATGGAGTCAAAGGAGATCATTTTGGAACTTTAGAATTTGACTGCCCTGCTGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454381.3
3UTR GCA 72 bp AGAGTCCTTAATATTCATTGCTTAGCATTTTGGTTTTaGTGGGCCTGGACTGGGAGTATTCCCTATTTCTCA +
Preference number: 3 (lower is better)
Translates to: RVLNIHCLAFWF*WAWTGSIPYFS
Trigger: TGAGAAATAGGGAATACTCCCAGTCCAGGCCCAGCAAAACCAAAATGCTAAGCAATGAATATTAAGGACTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282538.9
3UTR CCA 72 bp GTCCTTAATATTCATTGCTTAGCATTTTGGTTTTGCTaGGCCTGGACTGGGAGTATTCCCTATTTCTCATCA +
Preference number: 3 (lower is better)
Translates to: VLNIHCLAFWFC*AWTGSIPYFSS
Trigger: TGATGAGAAATAGGGAATACTCCCAGTCCAGGCCCAGCAAAACCAAAATGCTAAGCAATGAATATTAAGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282538.9
3UTR CCA 72 bp TATTGGGTAAATACAGCCATTCCAAATGGGAGAAATTaGTCAAAACAAAGGGGTTACAGGACCCATGCAAGT +
Preference number: 3 (lower is better)
Translates to: YWVNTAIPNGRN*SKQRGYRTHAS
Trigger: ACTTGCATGGGTCCTGTAACCCCTTTGTTTTGACCAATTTCTCCCATTTGGAATGGCTGTATTTACCCAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454381.3
3UTR-3UTR CAA 90 bp CATACCCGAGACTGGGAAGAAAAAGGTTTAATTGAACTTATAGTTCCACAGTTCTCAGCCTGGACCTTATaGTTCGTATCACTATCAGCA +
Preference number: 3 (lower is better)
Translates to: HTRDWEEKGLIELIVPQFSAWTL*FVSLSA
Trigger: TGCTGATAGTGATACGAACAATAAGGTCCAGGCTGA...GAACTGTGGAACTATAAGTTCAATTAAACCTTTTTCTTCCCAGTCTCGGGTATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454381.3
3UTR CCA 72 bp ATTTCAAAGCTTAGGAAAGGGAATGTTGTACAACCCTaGACTTCATTGTGTTTATTCCCTATGAGGCACAGA +
Preference number: 3 (lower is better)
Translates to: ISKLRKGNVVQP*TSLCLFPMRHR
Trigger: TCTGTGCCTCATAGGGAATAAACACAATGAAGTCCAGGGTTGTACAACATTCCCTTTCCTAAGCTTTGAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282538.9
3UTR TCA 72 bp TTTGTCAAAGCCATTCAACAAGTCTCTAGGAAGTTCTaGATTTTCCTGTCTTCTTCTGAGCCCTTCAAACTA +
Preference number: 3 (lower is better)
Translates to: FVKAIQQVSRKF*IFLSSSEPFKL
Trigger: TAGTTTGAAGGGCTCAGAAGAAGACAGGAAAATTCAGAACTTCCTAGAGACTTGTTGAATGGCTTTGACAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454381.3
CDS-3UTR TCA 90 bp GGGACTCTGTGTGGGGGCTCTGACCCCACATTTCCCTTCCACACTGCCCTAGCACAAGAAGCATCTACATaGAGCCAGAGGCTGTGCCTC +
Preference number: 4 (lower is better)
Translates to: GTLCGGSDPTFPFHTALAQEAST*SQRLCL
Trigger: GAGGCACAGCCTCTGGCTTCATGTAGATGCTTCTTG...TGCTAGGGCAGTGTGGAAGGGAAATGTGGGGTCAGAGCCCCCACACAGAGTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454381.3
CDS-3UTR GCA 90 bp GTTTGGGGCTTGCACCCTCTGAAACCATGGGCTGAGCTGCACCTTGGCCCCTTTACCAAGTCTGTAGGCTaGACACAGCTTGGGGACCCT +
Preference number: 4 (lower is better)
Translates to: VWGLHPLKPWAELHLGPFTKSVG*TQLGDP
Trigger: AGGGTCCCCAAGCTGTGTGCAGCCTACAGACTTGGT...AAAGGGGCCAAGGTGCAGCTCAGCCCATGGTTTCAGAGGGTGCAAGCCCCAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000454381.3
CDS-3UTR GCA 90 bp GTTTGGGGCTTGCACCCTCTGAAACCATGGGCTGAGCTGCACCTTGGCCCCTTTGAGACTTGGGCCTGCTaGTCCTTCCACTTGGGTCAT +
Preference number: 4 (lower is better)
Translates to: VWGLHPLKPWAELHLGPFETWAC*SFHLGH
Trigger: ATGACCCAAGTGGAAGGAGCAGCAGGCCCAAGTCTC...AAAGGGGCCAAGGTGCAGCTCAGCCCATGGTTTCAGAGGGTGCAAGCCCCAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454381.3
CDS-3UTR CCA 90 bp GGGACTCTGTGTGGGGGCTCTGACCCCACATTTCCCTTCCACACTGCCCTAGCAACAGAGTCAGCCCTGTaGATGCCATGCAGAAGCTTG +
Preference number: 4 (lower is better)
Translates to: GTLCGGSDPTFPFHTALATESAL*MPCRSL
Trigger: CAAGCTTCTGCATGGCATCCACAGGGCTGACTCTGT...TGCTAGGGCAGTGTGGAAGGGAAATGTGGGGTCAGAGCCCCCACACAGAGTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454381.3
CDS-3UTR GCA 90 bp AAGGCAAGTAAACATGGTGCTTCCACACTGCCTTTCCCTTCGAGACTTAAGCTGGGCGGTCCGAGTCGCTaGTCATCTCCGCTCCCCCAC +
Preference number: 4 (lower is better)
Translates to: KASKHGASTLPFPSRLKLGGPSR*SSPLPH
Trigger: GTGGGGGAGCGGAGATGAGCAGCGACTCGGACCGCC...CAGCTTAAGTCTCGAAGGGAAAGGCAGTGTGGAAGCACCATGTTTACTTGCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454381.3
3UTR CAA 72 bp GGACCTACCATTCTGGGGTCTGGAAGATGGTGGCCTTaGTCTCATAGCTCCACTAGGCAGTGCCCCAGTAGG +
Preference number: 4 (lower is better)
Translates to: GPTILGSGRWWP*SHSSTRQCPSR
Trigger: CCTACTGGGGCACTGCCTAGTGGAGCTATGAGACAAAGGCCACCATCTTCCAGACCCCAGAATGGTAGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454381.3
3UTR CAA 72 bp GTTCCCATAGCCTTTGGCAGCTCCACCCCTGTGGCTTaGCAGGGTATAGCCCCCATCATGGCTGCTTTCACA +
Preference number: 4 (lower is better)
Translates to: VPIAFGSSTPVA*QGIAPIMAAFT
Trigger: TGTGAAAGCAGCCATGATGGGGGCTATACCCTGCAAAGCCACAGGGGTGGAGCTGCCAAAGGCTATGGGAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454381.3
CDS-3UTR GCA 90 bp GTTTGGGGCTTGCACCCTCTGAAACCATGGGCTGAGCTGCACCTTGGCCCCTTTCCTCTCGCAGATGTCTaGTATTTCATCCAGAGGGTC +
Preference number: 4 (lower is better)
Translates to: VWGLHPLKPWAELHLGPFPLADV*YFIQRV
Trigger: GACCCTCTGGATGAAATAGCAGACATCTGCGAGAGG...AAAGGGGCCAAGGTGCAGCTCAGCCCATGGTTTCAGAGGGTGCAAGCCCCAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454381.3
CDS-3UTR CCA 90 bp GGGACTCTGTGTGGGGGCTCTGACCCCACATTTCCCTTCCACACTGCCCTAGCAGGTCTTCTGCTACACTaGATAGACTTGTCTCCTGTG +
Preference number: 4 (lower is better)
Translates to: GTLCGGSDPTFPFHTALAGLLLH*IDLSPV
Trigger: CACAGGAGACAAGTCTATCCAGTGTAGCAGAAGACC...TGCTAGGGCAGTGTGGAAGGGAAATGTGGGGTCAGAGCCCCCACACAGAGTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454381.3
CDS-3UTR GCA 90 bp GGGACTCTGTGTGGGGGCTCTGACCCCACATTTCCCTTCCACACTGCCCTAGCACTGGAAGAGGTAAGATaGCTTGGCAGAGTAGCATTT +
Preference number: 4 (lower is better)
Translates to: GTLCGGSDPTFPFHTALALEEVR*LGRVAF
Trigger: AAATGCTACTCTGCCAAGGCATCTTACCTCTTCCAG...TGCTAGGGCAGTGTGGAAGGGAAATGTGGGGTCAGAGCCCCCACACAGAGTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454381.3
CDS-3UTR TCA 90 bp GTTTGGGGCTTGCACCCTCTGAAACCATGGGCTGAGCTGCACCTTGGCCCCTTTGACACTCTGCAGATGTaGAAAGGATTAATCTTGGCG +
Preference number: 4 (lower is better)
Translates to: VWGLHPLKPWAELHLGPFDTLQM*KGLILA
Trigger: CGCCAAGATTAATCCTTTTCACATCTGCAGAGTGTC...AAAGGGGCCAAGGTGCAGCTCAGCCCATGGTTTCAGAGGGTGCAAGCCCCAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454381.3
CDS-3UTR TCA 90 bp GTTTGGGGCTTGCACCCTCTGAAACCATGGGCTGAGCTGCACCTTGGCCCCTTTTCACCTTGCCAAAAATaGGGGTCATTTGTGCATCTC +
Preference number: 4 (lower is better)
Translates to: VWGLHPLKPWAELHLGPFSPCQK*GSFVHL
Trigger: GAGATGCACAAATGACCCTCATTTTTGGCAAGGTGA...AAAGGGGCCAAGGTGCAGCTCAGCCCATGGTTTCAGAGGGTGCAAGCCCCAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000454381.3
CDS-3UTR TCA 90 bp ATCTCCCACTGCGTCCCGCCCACAACATCTGGGAATTATGGGAGTAGAATTCAATCTGAAACCATGGGCTaGGCTGCACCTTGGCCCCTT +
Preference number: 4 (lower is better)
Translates to: ISHCVPPTTSGNYGSRIQSETMG*AAPWPL
Trigger: AAGGGGCCAAGGTGCAGCTCAGCCCATGGTTTCAGA...TTGAATTCTACTCCCATAATTCCCAGATGTTGTGGGCGGGACGCAGTGGGAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454381.3
CDS-3UTR GCA 90 bp CCAAATCTCACGTGCTCACATTTCAAAACCAATCACACCTTCCCAACAGTCCCCGCCCTGTGGATGCCATaGAGAAGCTTGCGGTGCTTC +
Preference number: 4 (lower is better)
Translates to: PNLTCSHFKTNHTFPTVPALWMP*RSLRCF
Trigger: GAAGCACCGCAAGCTTCTGCATGGCATCCACAGGGC...GGGGACTGTTGGGAAGGTGTGATTGGTTTTGAAATGTGAGCACGTGAGATTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454381.3
CDS-3UTR GCA 90 bp GTTTGGGGCTTGCACCCTCTGAAACCATGGGCTGAGCTGCACCTTGGCCCCTTTCATCCAGAACTTGAATaGATCTGGTCTTCTGCTACA +
Preference number: 4 (lower is better)
Translates to: VWGLHPLKPWAELHLGPFHPELE*IWSSAT
Trigger: TGTAGCAGAAGACCAGATGCATTCAAGTTCTGGATG...AAAGGGGCCAAGGTGCAGCTCAGCCCATGGTTTCAGAGGGTGCAAGCCCCAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454381.3
CDS-3UTR CCA 90 bp ACATCTGGGAATTATGGGAGTAGAATTCAAGATGAGATTTGGGTGAGGACACAGCCGTCCACAGGACACTaGCGGTCCGAGTCGCTGCTC +
Preference number: 4 (lower is better)
Translates to: TSGNYGSRIQDEIWVRTQPSTGH*RSESLL
Trigger: GAGCAGCGACTCGGACCGCCAGTGTCCTGTGGACGG...CTGTGTCCTCACCCAAATCTCATCTTGAATTCTACTCCCATAATTCCCAGATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454381.3
CDS-3UTR CCA 90 bp GGGACTCTGTGTGGGGGCTCTGACCCCACATTTCCCTTCCACACTGCCCTAGCACCAAATGGGAGAAATTaGTCAAAACAAAGGGGTTAC +
Preference number: 4 (lower is better)
Translates to: GTLCGGSDPTFPFHTALAPNGRN*SKQRGY
Trigger: GTAACCCCTTTGTTTTGACCAATTTCTCCCATTTGG...TGCTAGGGCAGTGTGGAAGGGAAATGTGGGGTCAGAGCCCCCACACAGAGTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000454381.3
CDS-3UTR CCA 90 bp GGGACTCTGTGTGGGGGCTCTGACCCCACATTTCCCTTCCACACTGCCCTAGCATCAAGTAGCAATGTCTaGCACCTATATCTTGAGCTT +
Preference number: 4 (lower is better)
Translates to: GTLCGGSDPTFPFHTALASSSNV*HLYLEL
Trigger: AAGCTCAAGATATAGGTGCCAGACATTGCTACTTGA...TGCTAGGGCAGTGTGGAAGGGAAATGTGGGGTCAGAGCCCCCACACAGAGTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454381.3
CDS-3UTR TCA 90 bp AAGGCAAGTAAACATGGTGCTTCCACACTGCCTTTCCCTTCGAGACTTAAGCTGCCTCGACATCAAAGCTaGGCCACCCCAAGAAGCATC +
Preference number: 4 (lower is better)
Translates to: KASKHGASTLPFPSRLKLPRHQS*ATPRSI
Trigger: GATGCTTCTTGGGGTGGCTCAGCTTTGATGTCGAGG...CAGCTTAAGTCTCGAAGGGAAAGGCAGTGTGGAAGCACCATGTTTACTTGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454381.3
CDS-3UTR CCA 90 bp CCAAATCTCACGTGCTCACATTTCAAAACCAATCACACCTTCCCAACAGTCCCCAGGAGAGCACAGCACTaGATCCCAGCCATCAGCATC +
Preference number: 4 (lower is better)
Translates to: PNLTCSHFKTNHTFPTVPRRAQH*IPAISI
Trigger: GATGCTGATGGCTGGGATCCAGTGCTGTGCTCTCCT...GGGGACTGTTGGGAAGGTGTGATTGGTTTTGAAATGTGAGCACGTGAGATTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454381.3
CDS-3UTR CCA 90 bp CCAAATCTCACGTGCTCACATTTCAAAACCAATCACACCTTCCCAACAGTCCCCTCACATCCAGAGACTTaGGCCTGCTGCTCCTTCCAC +
Preference number: 4 (lower is better)
Translates to: PNLTCSHFKTNHTFPTVPSHPET*ACCSFH
Trigger: GTGGAAGGAGCAGCAGGCCCAAGTCTCTGGATGTGA...GGGGACTGTTGGGAAGGTGTGATTGGTTTTGAAATGTGAGCACGTGAGATTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454381.3
CDS-3UTR GCA 90 bp CCAAATCTCACGTGCTCACATTTCAAAACCAATCACACCTTCCCAACAGTCCCCACAGACAAGAAACGGTaGTGCCCCCTCTTTTCTGGC +
Preference number: 4 (lower is better)
Translates to: PNLTCSHFKTNHTFPTVPTDKKR*CPLFSG
Trigger: GCCAGAAAAGAGGGGGCAGCACCGTTTCTTGTCTGT...GGGGACTGTTGGGAAGGTGTGATTGGTTTTGAAATGTGAGCACGTGAGATTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000454381.3
CDS-3UTR GCA 90 bp ATTCTTGACTTGTGTGCCCACATGCTCAACACCACATGGAAGCTGCTAAGGTTTAGTCAGCCCTGTGGATaGCATGCAGAAGCTTGCGGT +
Preference number: 4 (lower is better)
Translates to: ILDLCAHMLNTTWKLLRFSQPCG*HAEACG
Trigger: ACCGCAAGCTTCTGCATGGCATCCACAGGGCTGACT...AAACCTTAGCAGCTTCCATGTGGTGTTGAGCATGTGGGCACACAAGTCAAGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454381.3
CDS-3UTR GCA 90 bp ATTCTTGACTTGTGTGCCCACATGCTCAACACCACATGGAAGCTGCTAAGGTTTAGCCCCCATCATGGCTaGTTTCACATGCTGGCACAC +
Preference number: 4 (lower is better)
Translates to: ILDLCAHMLNTTWKLLRFSPHHG*FHMLAH
Trigger: GTGTGCCAGCATGTGAAAGCAGCCATGATGGGGGCT...AAACCTTAGCAGCTTCCATGTGGTGTTGAGCATGTGGGCACACAAGTCAAGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454381.3
CDS-3UTR CCA 90 bp AAAATAGCCCCCATAATTCAAATTATTTCCCACCAGGTCCCTCCCACAACACCTCACCCTCTGAAACCATaGGCTGAGCTGCACCTTGGC +
Preference number: 4 (lower is better)
Translates to: KIAPIIQIISHQVPPTTPHPLKP*AELHLG
Trigger: GCCAAGGTGCAGCTCAGCCCATGGTTTCAGAGGGTG...AGGTGTTGTGGGAGGGACCTGGTGGGAAATAATTTGAATTATGGGGGCTATTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454381.3
CDS-3UTR CCA 90 bp GTTTGGGGCTTGCACCCTCTGAAACCATGGGCTGAGCTGCACCTTGGCCCCTTTAGACATACCCGAGACTaGGAAGAAAAAGGTTTAATT +
Preference number: 4 (lower is better)
Translates to: VWGLHPLKPWAELHLGPFRHTRD*EEKGLI
Trigger: AATTAAACCTTTTTCTTCCCAGTCTCGGGTATGTCT...AAAGGGGCCAAGGTGCAGCTCAGCCCATGGTTTCAGAGGGTGCAAGCCCCAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000454381.3
CDS-3UTR TCA 90 bp ATCTCCCACTGCGTCCCGCCCACAACATCTGGGAATTATGGGAGTAGAATTCAAAGGTCATCCAGAACTTaGATGCATCTGGTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: ISHCVPPTTSGNYGSRIQRSSRT*MHLVFC
Trigger: GCAGAAGACCAGATGCATTCAAGTTCTGGATGACCT...TTGAATTCTACTCCCATAATTCCCAGATGTTGTGGGCGGGACGCAGTGGGAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454381.3
CDS-3UTR TCA 90 bp ATCTCCCACTGCGTCCCGCCCACAACATCTGGGAATTATGGGAGTAGAATTCAATGGCCTGTCCACCACTaGTCTAAGTTTAGCAGTTCA +
Preference number: 4 (lower is better)
Translates to: ISHCVPPTTSGNYGSRIQWPVHH*SKFSSS
Trigger: TGAACTGCTAAACTTAGATCAGTGGTGGACAGGCCA...TTGAATTCTACTCCCATAATTCCCAGATGTTGTGGGCGGGACGCAGTGGGAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454381.3
CDS-3UTR GCA 90 bp CTGCCTGTTACCCAGTTCCAAAGTCGCTTCCACATTTTTGGGTATCTTTTCAGCGAGCCTCTGCCAGTGTaGCTCAAGAACACACTAGAG +
Preference number: 4 (lower is better)
Translates to: LPVTQFQSRFHIFGYLFSEPLPV*LKNTLE
Trigger: CTCTAGTGTGTTCTTGAGGCACACTGGCAGAGGCTC...GCTGAAAAGATACCCAAAAATGTGGAAGCGACTTTGGAACTGGGTAACAGGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454381.3
CDS-3UTR GCA 90 bp CCAAATCTCACGTGCTCACATTTCAAAACCAATCACACCTTCCCAACAGTCCCCGGGTTACAGGACCCATaGAAGTCTGAATTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: PNLTCSHFKTNHTFPTVPGLQDP*KSEFQQ
Trigger: CTGCTGGAATTCAGACTTGCATGGGTCCTGTAACCC...GGGGACTGTTGGGAAGGTGTGATTGGTTTTGAAATGTGAGCACGTGAGATTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454381.3
CDS-3UTR GCA 90 bp CCAAATCTCACGTGCTCACATTTCAAAACCAATCACACCTTCCCAACAGTCCCCCATATTATCTCCCACTaGGTCCCGCCCACAACATCT +
Preference number: 4 (lower is better)
Translates to: PNLTCSHFKTNHTFPTVPHIISH*VPPTTS
Trigger: AGATGTTGTGGGCGGGACGCAGTGGGAGATAATATG...GGGGACTGTTGGGAAGGTGTGATTGGTTTTGAAATGTGAGCACGTGAGATTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454381.3
CDS-3UTR GCA 90 bp CCAAATCTCACGTGCTCACATTTCAAAACCAATCACACCTTCCCAACAGTCCCCCTTCGAGACTTAAGCTaGCGCCACAACTCACAGATC +
Preference number: 4 (lower is better)
Translates to: PNLTCSHFKTNHTFPTVPLRDLS*RHNSQI
Trigger: GATCTGTGAGTTGTGGCGGCAGCTTAAGTCTCGAAG...GGGGACTGTTGGGAAGGTGTGATTGGTTTTGAAATGTGAGCACGTGAGATTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454381.3
CDS-3UTR GCA 90 bp ATCTCCCACTGCGTCCCGCCCACAACATCTGGGAATTATGGGAGTAGAATTCAAATGGTGCTTCCACACTaGCTTTCCCTTCGAGACTTA +
Preference number: 4 (lower is better)
Translates to: ISHCVPPTTSGNYGSRIQMVLPH*LSLRDL
Trigger: TAAGTCTCGAAGGGAAAGGCAGTGTGGAAGCACCAT...TTGAATTCTACTCCCATAATTCCCAGATGTTGTGGGCGGGACGCAGTGGGAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454381.3
CDS-3UTR CCA 90 bp ATCTCCCACTGCGTCCCGCCCACAACATCTGGGAATTATGGGAGTAGAATTCAAAGTTCCAATAGTTTATaGGGTGGCTCGCCTGAGTCT +
Preference number: 4 (lower is better)
Translates to: ISHCVPPTTSGNYGSRIQSSNSL*GGSPES
Trigger: AGACTCAGGCGAGCCACCCCATAAACTATTGGAACT...TTGAATTCTACTCCCATAATTCCCAGATGTTGTGGGCGGGACGCAGTGGGAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454381.3
CDS-3UTR CCA 90 bp AAGGCAAGTAAACATGGTGCTTCCACACTGCCTTTCCCTTCGAGACTTAAGCTGAGTAGGCTAGGATCTTaGAGGGAGGTGATAGGACTG +
Preference number: 4 (lower is better)
Translates to: KASKHGASTLPFPSRLKLSRLGS*REVIGL
Trigger: CAGTCCTATCACCTCCCTCCAAGATCCTAGCCTACT...CAGCTTAAGTCTCGAAGGGAAAGGCAGTGTGGAAGCACCATGTTTACTTGCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454381.3
CDS-3UTR CCA 90 bp ATTCTTGACTTGTGTGCCCACATGCTCAACACCACATGGAAGCTGCTAAGGTTTACAGTTCCACATGGCTaGGGAGGCCTCAATTCATGG +
Preference number: 4 (lower is better)
Translates to: ILDLCAHMLNTTWKLLRFTVPHG*GGLNSW
Trigger: CCATGAATTGAGGCCTCCCCAGCCATGTGGAACTGT...AAACCTTAGCAGCTTCCATGTGGTGTTGAGCATGTGGGCACACAAGTCAAGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454381.3
CDS-3UTR CCA 90 bp AAAATAGCCCCCATAATTCAAATTATTTCCCACCAGGTCCCTCCCACAACACCTCCTTTTAGCAATGGCTaGAGCAGCTGGGATGCAGGG +
Preference number: 4 (lower is better)
Translates to: KIAPIIQIISHQVPPTTPPFSNG*SSWDAG
Trigger: CCCTGCATCCCAGCTGCTCCAGCCATTGCTAAAAGG...AGGTGTTGTGGGAGGGACCTGGTGGGAAATAATTTGAATTATGGGGGCTATTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000454381.3
CDS-3UTR CCA 90 bp CTGCCTGTTACCCAGTTCCAAAGTCGCTTCCACATTTTTGGGTATCTTTTCAGCGAGGCCTCAGAATCATaGTGGGAGGCAAAAGGCACT +
Preference number: 4 (lower is better)
Translates to: LPVTQFQSRFHIFGYLFSEASES*WEAKGT
Trigger: AGTGCCTTTTGCCTCCCACCATGATTCTGAGGCCTC...GCTGAAAAGATACCCAAAAATGTGGAAGCGACTTTGGAACTGGGTAACAGGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000454381.3
CDS-3UTR TCA 90 bp AAGGCAAGTAAACATGGTGCTTCCACACTGCCTTTCCCTTCGAGACTTAAGCTGGGGAAACCACCCCCATaGTTCATATTATCTCCCACT +
Preference number: 4 (lower is better)
Translates to: KASKHGASTLPFPSRLKLGKPPP*FILSPT
Trigger: AGTGGGAGATAATATGAATCATGGGGGTGGTTTCCC...CAGCTTAAGTCTCGAAGGGAAAGGCAGTGTGGAAGCACCATGTTTACTTGCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454381.3
CDS-3UTR GCA 90 bp ACATCTGGGAATTATGGGAGTAGAATTCAAGATGAGATTTGGGTGAGGACACAGAACCATGGGCTGAGCTaGACCTTGGCCCCTTTTAGC +
Preference number: 4 (lower is better)
Translates to: TSGNYGSRIQDEIWVRTQNHGLS*TLAPFS
Trigger: GCTAAAAGGGGCCAAGGTGCAGCTCAGCCCATGGTT...CTGTGTCCTCACCCAAATCTCATCTTGAATTCTACTCCCATAATTCCCAGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454381.3
CDS-3UTR CCA 90 bp AAAATAGCCCCCATAATTCAAATTATTTCCCACCAGGTCCCTCCCACAACACCTCTGCCCCCTCTTTTCTaGCTTGCCAGACTTGCTTCT +
Preference number: 4 (lower is better)
Translates to: KIAPIIQIISHQVPPTTPLPPLF*LARLAS
Trigger: AGAAGCAAGTCTGGCAAGCCAGAAAAGAGGGGGCAG...AGGTGTTGTGGGAGGGACCTGGTGGGAAATAATTTGAATTATGGGGGCTATTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000454381.3
CDS-3UTR CCA 90 bp CCAAATCTCACGTGCTCACATTTCAAAACCAATCACACCTTCCCAACAGTCCCCCAGTTGTACCAGAAGTaGCACAGACAAGAAACGGTG +
Preference number: 4 (lower is better)
Translates to: PNLTCSHFKTNHTFPTVPQLYQK*HRQETV
Trigger: CACCGTTTCTTGTCTGTGCCACTTCTGGTACAACTG...GGGGACTGTTGGGAAGGTGTGATTGGTTTTGAAATGTGAGCACGTGAGATTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454381.3
CDS-3UTR CCA 90 bp CTGCCTGTTACCCAGTTCCAAAGTCGCTTCCACATTTTTGGGTATCTTTTCAGCAGTGTAAGCTGTCAGTaGACCTACCATTCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: LPVTQFQSRFHIFGYLFSSVSCQ*TYHSGV
Trigger: GACCCCAGAATGGTAGGTCCACTGACAGCTTACACT...GCTGAAAAGATACCCAAAAATGTGGAAGCGACTTTGGAACTGGGTAACAGGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000454381.3
CDS-3UTR TCA 90 bp CCAAATCTCACGTGCTCACATTTCAAAACCAATCACACCTTCCCAACAGTCCCCGAATACAATTCAAGATaGGATCTGGGTGGGGACACA +
Preference number: 4 (lower is better)
Translates to: PNLTCSHFKTNHTFPTVPEYNSR*DLGGDT
Trigger: TGTGTCCCCACCCAGATCTCATCTTGAATTGTATTC...GGGGACTGTTGGGAAGGTGTGATTGGTTTTGAAATGTGAGCACGTGAGATTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000454381.3
CDS-3UTR GCA 90 bp AAAATAGCCCCCATAATTCAAATTATTTCCCACCAGGTCCCTCCCACAACACCTCCGAAAGGCACTTCTTaGATGGCAGCAGCAAGAGAA +
Preference number: 4 (lower is better)
Translates to: KIAPIIQIISHQVPPTTPPKGTS*MAAARE
Trigger: TTCTCTTGCTGCTGCCATGCAAGAAGTGCCTTTCGG...AGGTGTTGTGGGAGGGACCTGGTGGGAAATAATTTGAATTATGGGGGCTATTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454381.3
CDS-3UTR GCA 90 bp ATTCTTGACTTGTGTGCCCACATGCTCAACACCACATGGAAGCTGCTAAGGTTTCAAACTATGTCATTCTaGCCCTTGCCCCTCCAAATC +
Preference number: 4 (lower is better)
Translates to: ILDLCAHMLNTTWKLLRFQTMSF*PLPLQI
Trigger: GATTTGGAGGGGCAAGGGGCAGAATGACATAGTTTG...AAACCTTAGCAGCTTCCATGTGGTGTTGAGCATGTGGGCACACAAGTCAAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454381.3
3UTR CAA 72 bp AATTTAGGTGGAGGTTCCCAAACCTCAATTCTTGACTaGTGTGCCCACATGCTCAACACCACATGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: NLGGGSQTSILD*CAHMLNTTWKL
Trigger: CAGCTTCCATGTGGTGTTGAGCATGTGGGCACACAAGTCAAGAATTGAGGTTTGGGAACCTCCACCTAAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454381.3
3UTR CAA 72 bp TTTGCTTTTCAGGTCCTTAATGTCACATCCAGACTTTaGTGTCACCTCACATCCAGAGACTTGGGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: FAFQVLNVTSRL*CHLTSRDLGLL
Trigger: CAGCAGGCCCAAGTCTCTGGATGTGAGGTGACACAAAAGTCTGGATGTGACATTAAGGACCTGAAAAGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454381.3
CDS-3UTR TCA 90 bp AAAATAGCCCCCATAATTCAAATTATTTCCCACCAGGTCCCTCCCACAACACCTGTGTCCCCAGGCCCATaGAATCATTTATTCCTCCTA +
Preference number: 4 (lower is better)
Translates to: KIAPIIQIISHQVPPTTPVSPGP*NHLFLL
Trigger: TAGGAGGAATAAATGATTTCATGGGCCTGGGGACAC...AGGTGTTGTGGGAGGGACCTGGTGGGAAATAATTTGAATTATGGGGGCTATTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000454381.3
CDS-3UTR GCA 90 bp ACATCTGGGAATTATGGGAGTAGAATTCAAGATGAGATTTGGGTGAGGACACAGTGCAGAAGCTTGCGGTaGTTCCTCGACATCAAAGCT +
Preference number: 4 (lower is better)
Translates to: TSGNYGSRIQDEIWVRTQCRSLR*FLDIKA
Trigger: AGCTTTGATGTCGAGGAAGCACCGCAAGCTTCTGCA...CTGTGTCCTCACCCAAATCTCATCTTGAATTCTACTCCCATAATTCCCAGATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454381.3
CDS-3UTR CCA 90 bp ATTCTTGACTTGTGTGCCCACATGCTCAACACCACATGGAAGCTGCTAAGGTTTTCATTGCATACATATTaGACACTGAGCCACCTGGGT +
Preference number: 4 (lower is better)
Translates to: ILDLCAHMLNTTWKLLRFSLHTY*TLSHLG
Trigger: ACCCAGGTGGCTCAGTGTCCAATATGTATGCAATGA...AAACCTTAGCAGCTTCCATGTGGTGTTGAGCATGTGGGCACACAAGTCAAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454381.3
CDS-3UTR CCA 90 bp CCAAATCTCACGTGCTCACATTTCAAAACCAATCACACCTTCCCAACAGTCCCCGAACTTGAATGCATCTaGTCTTCTGCTACACTGGAT +
Preference number: 4 (lower is better)
Translates to: PNLTCSHFKTNHTFPTVPELECI*SSATLD
Trigger: ATCCAGTGTAGCAGAAGACCAGATGCATTCAAGTTC...GGGGACTGTTGGGAAGGTGTGATTGGTTTTGAAATGTGAGCACGTGAGATTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454381.3
CDS-3UTR TCA 90 bp AAGGCAAGTAAACATGGTGCTTCCACACTGCCTTTCCCTTCGAGACTTAAGCTGATCCAAGTCACCTCTTaGATGCTTTGCTGCTTAAAA +
Preference number: 4 (lower is better)
Translates to: KASKHGASTLPFPSRLKLIQVTS*MLCCLK
Trigger: TTTTAAGCAGCAAAGCATTCAAGAGGTGACTTGGAT...CAGCTTAAGTCTCGAAGGGAAAGGCAGTGTGGAAGCACCATGTTTACTTGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454381.3
CDS-3UTR TCA 90 bp CTGCCTGTTACCCAGTTCCAAAGTCGCTTCCACATTTTTGGGTATCTTTTCAGCTTTCCATACCTCTTCTaGAATTTAGGTGGAGGTTCC +
Preference number: 4 (lower is better)
Translates to: LPVTQFQSRFHIFGYLFSFPYLF*NLGGGS
Trigger: GGAACCTCCACCTAAATTTCAGAAGAGGTATGGAAA...GCTGAAAAGATACCCAAAAATGTGGAAGCGACTTTGGAACTGGGTAACAGGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454381.3
CDS-3UTR GCA 90 bp ATTCTTGACTTGTGTGCCCACATGCTCAACACCACATGGAAGCTGCTAAGGTTTAACACTTGGATTCAATaGTTCGGTCATAAATCGGGC +
Preference number: 4 (lower is better)
Translates to: ILDLCAHMLNTTWKLLRFNTWIQ*FGHKSG
Trigger: GCCCGATTTATGACCGAAGCATTGAATCCAAGTGTT...AAACCTTAGCAGCTTCCATGTGGTGTTGAGCATGTGGGCACACAAGTCAAGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454381.3
CDS-3UTR GCA 90 bp CATACCCGAGACTGGGAAGAAAAAGGTTTAATTGAACTTATAGTTCCACAGTTCCTGGCTTGCCAGACTTaGTTCTCCAGTTCCTCAGGT +
Preference number: 4 (lower is better)
Translates to: HTRDWEEKGLIELIVPQFLACQT*FSSSSG
Trigger: ACCTGAGGAACTGGAGAAGCAAGTCTGGCAAGCCAG...GAACTGTGGAACTATAAGTTCAATTAAACCTTTTTCTTCCCAGTCTCGGGTATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454381.3
CDS-3UTR GCA 90 bp CATACCCGAGACTGGGAAGAAAAAGGTTTAATTGAACTTATAGTTCCACAGTTCTGCCATGCAGAAGCTTaGGGTGCTTCCTCGACATCA +
Preference number: 4 (lower is better)
Translates to: HTRDWEEKGLIELIVPQFCHAEA*GASSTS
Trigger: TGATGTCGAGGAAGCACCGCAAGCTTCTGCATGGCA...GAACTGTGGAACTATAAGTTCAATTAAACCTTTTTCTTCCCAGTCTCGGGTATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454381.3
CDS-3UTR CCA 90 bp CCAAATCTCACGTGCTCACATTTCAAAACCAATCACACCTTCCCAACAGTCCCCAGTCCAGCATACAATTaGTTGAAAAATCTTGGGTGG +
Preference number: 4 (lower is better)
Translates to: PNLTCSHFKTNHTFPTVPSPAYN*LKNLGW
Trigger: CCACCCAAGATTTTTCAACCAATTGTATGCTGGACT...GGGGACTGTTGGGAAGGTGTGATTGGTTTTGAAATGTGAGCACGTGAGATTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000454381.3
CDS-3UTR CCA 90 bp ATTCTTGACTTGTGTGCCCACATGCTCAACACCACATGGAAGCTGCTAAGGTTTACCTATGACATGCCCTaGAGACATTTTCCCTATTGT +
Preference number: 4 (lower is better)
Translates to: ILDLCAHMLNTTWKLLRFTYDMP*RHFPYC
Trigger: ACAATAGGGAAAATGTCTCCAGGGCATGTCATAGGT...AAACCTTAGCAGCTTCCATGTGGTGTTGAGCATGTGGGCACACAAGTCAAGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454381.3
CDS-3UTR CCA 90 bp CTGCCTGTTACCCAGTTCCAAAGTCGCTTCCACATTTTTGGGTATCTTTTCAGCCTTCTTACGTGGAAGTaGCAAGAGAAAAAGAAACGC +
Preference number: 4 (lower is better)
Translates to: LPVTQFQSRFHIFGYLFSLLTWK*QEKKKR
Trigger: GCGTTTCTTTTTCTCTTGCCACTTCCACGTAAGAAG...GCTGAAAAGATACCCAAAAATGTGGAAGCGACTTTGGAACTGGGTAACAGGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000454381.3
CDS-3UTR TCA 90 bp AAAATAGCCCCCATAATTCAAATTATTTCCCACCAGGTCCCTCCCACAACACCTGGAATCATCTCTTGTTaGTCAATATCTCCGTCCACA +
Preference number: 4 (lower is better)
Translates to: KIAPIIQIISHQVPPTTPGIISC*SISPST
Trigger: TGTGGACGGAGATATTGATCAACAAGAGATGATTCC...AGGTGTTGTGGGAGGGACCTGGTGGGAAATAATTTGAATTATGGGGGCTATTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454381.3
CDS-3UTR TCA 90 bp CTGCCTGTTACCCAGTTCCAAAGTCGCTTCCACATTTTTGGGTATCTTTTCAGCATACATATTGGACACTaGGCCACCTGGGTTAAATAT +
Preference number: 4 (lower is better)
Translates to: LPVTQFQSRFHIFGYLFSIHIGH*ATWVKY
Trigger: ATATTTAACCCAGGTGGCTCAGTGTCCAATATGTAT...GCTGAAAAGATACCCAAAAATGTGGAAGCGACTTTGGAACTGGGTAACAGGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454381.3
CDS-3UTR TCA 90 bp AAGGCAAGTAAACATGGTGCTTCCACACTGCCTTTCCCTTCGAGACTTAAGCTGACACTTAGTAGGTACTaGGAAAATGTGTATTGGATG +
Preference number: 4 (lower is better)
Translates to: KASKHGASTLPFPSRLKLTLSRY*ENVYWM
Trigger: CATCCAATACACATTTTCTCAGTACCTACTAAGTGT...CAGCTTAAGTCTCGAAGGGAAAGGCAGTGTGGAAGCACCATGTTTACTTGCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454381.3
CDS-3UTR TCA 90 bp CTGCCTGTTACCCAGTTCCAAAGTCGCTTCCACATTTTTGGGTATCTTTTCAGCCAAAATGATCTCCTTTaGCTCCATGTCTCATATCTG +
Preference number: 4 (lower is better)
Translates to: LPVTQFQSRFHIFGYLFSQNDLL*LHVSYL
Trigger: CAGATATGAGACATGGAGTCAAAGGAGATCATTTTG...GCTGAAAAGATACCCAAAAATGTGGAAGCGACTTTGGAACTGGGTAACAGGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000454381.3
CDS-3UTR GCA 90 bp AAAATAGCCCCCATAATTCAAATTATTTCCCACCAGGTCCCTCCCACAACACCTAGCAAACATTCTCAGTaGCAATCCCAAGAAAAGAGG +
Preference number: 4 (lower is better)
Translates to: KIAPIIQIISHQVPPTTPSKHSQ*QSQEKR
Trigger: CCTCTTTTCTTGGGATTGGCACTGAGAATGTTTGCT...AGGTGTTGTGGGAGGGACCTGGTGGGAAATAATTTGAATTATGGGGGCTATTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000454381.3
CDS-3UTR GCA 90 bp CATACCCGAGACTGGGAAGAAAAAGGTTTAATTGAACTTATAGTTCCACAGTTCCCCTCTTTTCTGGCTTaGCAGACTTGCTTCTCCAGT +
Preference number: 4 (lower is better)
Translates to: HTRDWEEKGLIELIVPQFPSFLA*QTCFSS
Trigger: ACTGGAGAAGCAAGTCTGGCAAGCCAGAAAAGAGGG...GAACTGTGGAACTATAAGTTCAATTAAACCTTTTTCTTCCCAGTCTCGGGTATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000454381.3
CDS-3UTR GCA 90 bp ATTCTTGACTTGTGTGCCCACATGCTCAACACCACATGGAAGCTGCTAAGGTTTAACAAGAGTCAACTTTaGTCCAGTTCCCAACAAGTT +
Preference number: 4 (lower is better)
Translates to: ILDLCAHMLNTTWKLLRFNKSQL*SSSQQV
Trigger: AACTTGTTGGGAACTGGAGCAAAGTTGACTCTTGTT...AAACCTTAGCAGCTTCCATGTGGTGTTGAGCATGTGGGCACACAAGTCAAGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454381.3
CDS-3UTR CCA 90 bp CTGCCTGTTACCCAGTTCCAAAGTCGCTTCCACATTTTTGGGTATCTTTTCAGCCTTCTGAAATTTAGGTaGAGGTTCCCAAACCTCAAT +
Preference number: 4 (lower is better)
Translates to: LPVTQFQSRFHIFGYLFSLLKFR*RFPNLN
Trigger: ATTGAGGTTTGGGAACCTCCACCTAAATTTCAGAAG...GCTGAAAAGATACCCAAAAATGTGGAAGCGACTTTGGAACTGGGTAACAGGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454381.3
3UTR CAA 72 bp TCATCTCCATCTGAGACTACCTCAGCCTGGACCTTATaGTTCGTATCACTATCAGCATTTTTGTCAAAGCCA +
Preference number: 4 (lower is better)
Translates to: SSPSETTSAWTL*FVSLSAFLSKP
Trigger: TGGCTTTGACAAAAATGCTGATAGTGATACGAACAATAAGGTCCAGGCTGAGGTAGTCTCAGATGGAGATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454381.3
CDS-3UTR CCA 90 bp CCAAATCTCACGTGCTCACATTTCAAAACCAATCACACCTTCCCAACAGTCCCCAGCATTCTTCTTACTTaGAATCATCTCTTGTTGATC +
Preference number: 4 (lower is better)
Translates to: PNLTCSHFKTNHTFPTVPSILLT*NHLLLI
Trigger: GATCAACAAGAGATGATTCCAAGTAAGAAGAATGCT...GGGGACTGTTGGGAAGGTGTGATTGGTTTTGAAATGTGAGCACGTGAGATTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454381.3
CDS-3UTR CCA 90 bp AAGGCAAGTAAACATGGTGCTTCCACACTGCCTTTCCCTTCGAGACTTAAGCTGAGAAAAAGGTTTAATTaGACTTACAGTTCCACATGG +
Preference number: 4 (lower is better)
Translates to: KASKHGASTLPFPSRLKLRKRFN*TYSSTW
Trigger: CCATGTGGAACTGTAAGTCCAATTAAACCTTTTTCT...CAGCTTAAGTCTCGAAGGGAAAGGCAGTGTGGAAGCACCATGTTTACTTGCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454381.3
CDS-3UTR CCA 90 bp CATACCCGAGACTGGGAAGAAAAAGGTTTAATTGAACTTATAGTTCCACAGTTCATGCTCAACACCACATaGAAGCTGCTAAGGTTTGGG +
Preference number: 4 (lower is better)
Translates to: HTRDWEEKGLIELIVPQFMLNTT*KLLRFG
Trigger: CCCAAACCTTAGCAGCTTCCATGTGGTGTTGAGCAT...GAACTGTGGAACTATAAGTTCAATTAAACCTTTTTCTTCCCAGTCTCGGGTATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454381.3
CDS-3UTR CCA 90 bp ATTCTTGACTTGTGTGCCCACATGCTCAACACCACATGGAAGCTGCTAAGGTTTTACAGCCATTCCAAATaGGAGAAATTGGTCAAAACA +
Preference number: 4 (lower is better)
Translates to: ILDLCAHMLNTTWKLLRFYSHSK*EKLVKT
Trigger: TGTTTTGACCAATTTCTCCCATTTGGAATGGCTGTA...AAACCTTAGCAGCTTCCATGTGGTGTTGAGCATGTGGGCACACAAGTCAAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454381.3
3UTR CAA 72 bp ACTGGCTCAGAGGCTTCTGAAATATTAGATATCCCTTaGCTGGCAAAACATCAGAGTGGGTATTCGATCATT +
Preference number: 4 (lower is better)
Translates to: TGSEASEILDIP*LAKHQSGYSII
Trigger: AATGATCGAATACCCACTCTGATGTTTTGCCAGCAAAGGGATATCTAATATTTCAGAAGCCTCTGAGCCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282538.9
CDS-3UTR TCA 90 bp ACATCTGGGAATTATGGGAGTAGAATTCAAGATGAGATTTGGGTGAGGACACAGTTTCCTGTCTTCTTCTaGGCCCTTCAAACTATTTCA +
Preference number: 4 (lower is better)
Translates to: TSGNYGSRIQDEIWVRTQFPVFF*ALQTIS
Trigger: TGAAATAGTTTGAAGGGCTCAGAAGAAGACAGGAAA...CTGTGTCCTCACCCAAATCTCATCTTGAATTCTACTCCCATAATTCCCAGATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454381.3
CDS-3UTR TCA 90 bp ACATCTGGGAATTATGGGAGTAGAATTCAAGATGAGATTTGGGTGAGGACACAGGTCTCTAGGAAGTTCTaGATTTTCCTGTCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: TSGNYGSRIQDEIWVRTQVSRKF*IFLSSS
Trigger: AGAAGAAGACAGGAAAATTCAGAACTTCCTAGAGAC...CTGTGTCCTCACCCAAATCTCATCTTGAATTCTACTCCCATAATTCCCAGATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454381.3
CDS-3UTR TCA 90 bp AAAATAGCCCCCATAATTCAAATTATTTCCCACCAGGTCCCTCCCACAACACCTTCTAAAGTTCCAAAATaGTCTCCTTTGACTCCATGT +
Preference number: 4 (lower is better)
Translates to: KIAPIIQIISHQVPPTTPSKVPK*SPLTPC
Trigger: ACATGGAGTCAAAGGAGATCATTTTGGAACTTTAGA...AGGTGTTGTGGGAGGGACCTGGTGGGAAATAATTTGAATTATGGGGGCTATTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000454381.3
CDS-3UTR CCA 90 bp ATTCTTGACTTGTGTGCCCACATGCTCAACACCACATGGAAGCTGCTAAGGTTTTTGGTTGAAAAATCTTaGGTGGTTAGTTTTGACACT +
Preference number: 4 (lower is better)
Translates to: ILDLCAHMLNTTWKLLRFLVEKS*VVSFDT
Trigger: AGTGTCAAAACTAACCACCCAAGATTTTTCAACCAA...AAACCTTAGCAGCTTCCATGTGGTGTTGAGCATGTGGGCACACAAGTCAAGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000454381.3
CDS-3UTR CCA 90 bp CTGCCTGTTACCCAGTTCCAAAGTCGCTTCCACATTTTTGGGTATCTTTTCAGCATACGTATAAACACTTaGATTCAATGCTTCGGTCAT +
Preference number: 4 (lower is better)
Translates to: LPVTQFQSRFHIFGYLFSIRINT*IQCFGH
Trigger: ATGACCGAAGCATTGAATCCAAGTGTTTATACGTAT...GCTGAAAAGATACCCAAAAATGTGGAAGCGACTTTGGAACTGGGTAACAGGCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454381.3
CDS-3UTR CCA 90 bp CATACCCGAGACTGGGAAGAAAAAGGTTTAATTGAACTTATAGTTCCACAGTTCATTCAAGATGAGATTTaGGTGAGGACACAGAGCCAA +
Preference number: 4 (lower is better)
Translates to: HTRDWEEKGLIELIVPQFIQDEI*VRTQSQ
Trigger: TTGGCTCTGTGTCCTCACCCAAATCTCATCTTGAAT...GAACTGTGGAACTATAAGTTCAATTAAACCTTTTTCTTCCCAGTCTCGGGTATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454381.3
CDS-3UTR CCA 90 bp CATACCCGAGACTGGGAAGAAAAAGGTTTAATTGAACTTATAGTTCCACAGTTCAAGGCACTTCTTACGTaGAAGTGGCAAGAGAAAAAG +
Preference number: 4 (lower is better)
Translates to: HTRDWEEKGLIELIVPQFKALLT*KWQEKK
Trigger: CTTTTTCTCTTGCCACTTCCACGTAAGAAGTGCCTT...GAACTGTGGAACTATAAGTTCAATTAAACCTTTTTCTTCCCAGTCTCGGGTATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000454381.3
3UTR CAA 72 bp GCCTGGACCTTATTGTTCGTATCACTATCAGCATTTTaGTCAAAGCCATTCAACAAGTCTCTAGGAAGTTCT +
Preference number: 4 (lower is better)
Translates to: AWTLLFVSLSAF*SKPFNKSLGSS
Trigger: AGAACTTCCTAGAGACTTGTTGAATGGCTTTGACAAAAATGCTGATAGTGATACGAACAATAAGGTCCAGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454381.3
3UTR CAA 72 bp GCTAGTAACTTCCTAGATACAATGGGGATACAGATATaGGGTAAATACAGCCATTCCAAATGGGAGAAATTG +
Preference number: 4 (lower is better)
Translates to: ASNFLDTMGIQI*GKYSHSKWEKL
Trigger: CAATTTCTCCCATTTGGAATGGCTGTATTTACCCAATATCTGTATCCCCATTGTATCTAGGAAGTTACTAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454381.3
3UTR CAA 72 bp TCTATACTGACATTTCAAAGCTTAGGAAAGGGAATGTaGTACAACCCTGGACTTCATTGTGTTTATTCCCTA +
Preference number: 4 (lower is better)
Translates to: SILTFQSLGKGM*YNPGLHCVYSL
Trigger: TAGGGAATAAACACAATGAAGTCCAGGGTTGTACAACATTCCCTTTCCTAAGCTTTGAAATGTCAGTATAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282538.9
3UTR CAA 72 bp AGTCCTATTCAAGTAGCAATGTCTGGCACCTATATCTaGAGCTTTTCTAATGTTCTTGAAAGTGTGACAACA +
Preference number: 4 (lower is better)
Translates to: SPIQVAMSGTYI*SFSNVLESVTT
Trigger: TGTTGTCACACTTTCAAGAACATTAGAAAAGCTCAAGATATAGGTGCCAGACATTGCTACTTGAATAGGACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454381.3
CDS GCA 90 bp GTTGATCAATATCTCCGTCCACAGGACACTGGCGGTCCGAGTCGCTaGTCATCTCCGCTCCCCCACTCCAGGCTGCCCCGGGCGCGGCTC +
Preference number: 5 (lower is better)
Translates to: VDQYLRPQDTGGPSR*SSPLPHSRLPRARL
Trigger: GAGCCGCGCCCGGGGCAGCCTGGAGTGGGGGAGCGGAGATGAGCAGCGACTCGGACCGCCAGTGTCCTGTGGACGGAGATATTGATCAAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282538.10
ENST00000454381.3
CDS-3UTR CAA 90 bp GGGACTCTGTGTGGGGGCTCTGACCCCACATTTCCCTTCCACACTGCCCTAGCATCTGGCTTGCCAGACTaGCTTCTCCAGTTCCTCAGG +
Preference number: 5 (lower is better)
Translates to: GTLCGGSDPTFPFHTALASGLPD*LLQFLR
Trigger: CCTGAGGAACTGGAGAAGCAAGTCTGGCAAGCCAGA...TGCTAGGGCAGTGTGGAAGGGAAATGTGGGGTCAGAGCCCCCACACAGAGTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454381.3
CDS-3UTR CAA 90 bp GGGACTCTGTGTGGGGGCTCTGACCCCACATTTCCCTTCCACACTGCCCTAGCAATGCCATGCAGAAGCTaGCGGTGCTTCCTCGACATC +
Preference number: 5 (lower is better)
Translates to: GTLCGGSDPTFPFHTALAMPCRS*RCFLDI
Trigger: GATGTCGAGGAAGCACCGCAAGCTTCTGCATGGCAT...TGCTAGGGCAGTGTGGAAGGGAAATGTGGGGTCAGAGCCCCCACACAGAGTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454381.3
CDS TCA 90 bp AAGTCTATCTCATCCAGGAGGAAGTCCATGTCCTCCCGGCTCACTTaGGGGCTGATCACCACCTGGCGGAAGAAGTTGACCTTTCCCCGG +
Preference number: 5 (lower is better)
Translates to: KSISSRRKSMSSRLT*GLITTWRKKLTFPR
Trigger: CCGGGGAAAGGTCAACTTCTTCCGCCAGGTGGTGATCAGCCCTCAAGTGAGCCGGGAGGACATGGACTTCCTCCTGGATGAGATAGACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282538.10
ENST00000498387.1
CDS-3UTR CAA 90 bp GGGACTCTGTGTGGGGGCTCTGACCCCACATTTCCCTTCCACACTGCCCTAGCACCAGCATACAATTGGTaGAAAAATCTTGGGTGGTTA +
Preference number: 5 (lower is better)
Translates to: GTLCGGSDPTFPFHTALAPAYNW*KNLGWL
Trigger: TAACCACCCAAGATTTTTCAACCAATTGTATGCTGG...TGCTAGGGCAGTGTGGAAGGGAAATGTGGGGTCAGAGCCCCCACACAGAGTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000454381.3
CDS-3UTR CAA 90 bp GGGACTCTGTGTGGGGGCTCTGACCCCACATTTCCCTTCCACACTGCCCTAGCACATACGTATAAACACTaGGATTCAATGCTTCGGTCA +
Preference number: 5 (lower is better)
Translates to: GTLCGGSDPTFPFHTALAHTYKH*DSMLRS
Trigger: TGACCGAAGCATTGAATCCAAGTGTTTATACGTATG...TGCTAGGGCAGTGTGGAAGGGAAATGTGGGGTCAGAGCCCCCACACAGAGTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454381.3
CDS-3UTR CAA 90 bp ATCTCCCACTGCGTCCCGCCCACAACATCTGGGAATTATGGGAGTAGAATTCAAGCTAAGGTTTGGGGCTaGCACCCTCTGAAACCATGG +
Preference number: 5 (lower is better)
Translates to: ISHCVPPTTSGNYGSRIQAKVWG*HPLKPW
Trigger: CCATGGTTTCAGAGGGTGCAAGCCCCAAACCTTAGC...TTGAATTCTACTCCCATAATTCCCAGATGTTGTGGGCGGGACGCAGTGGGAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454381.3
CDS-3UTR CAA 90 bp CCAAATCTCACGTGCTCACATTTCAAAACCAATCACACCTTCCCAACAGTCCCCGCCGAAAGGCACTTCTaGCATGGCAGCAGCAAGAGA +
Preference number: 5 (lower is better)
Translates to: PNLTCSHFKTNHTFPTVPAERHF*HGSSKR
Trigger: TCTCTTGCTGCTGCCATGCAAGAAGTGCCTTTCGGC...GGGGACTGTTGGGAAGGTGTGATTGGTTTTGAAATGTGAGCACGTGAGATTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454381.3
CDS GCA 90 bp AGAAGCATCTACATGAAGCCAGAGGCTGTGCCTCTCGCAGATGTCTaGTATTTCATCCAGAGGGTCAAAAGCTCCCAACACAGTTGTACC +
Preference number: 5 (lower is better)
Translates to: RSIYMKPEAVPLADV*YFIQRVKSSQHSCT
Trigger: GGTACAACTGTGTTGGGAGCTTTTGACCCTCTGGATGAAATAGCAGACATCTGCGAGAGGCACAGCCTCTGGCTTCATGTAGATGCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282538.10
ENST00000454381.3
CDS-3UTR CAA 90 bp ACATCTGGGAATTATGGGAGTAGAATTCAAGATGAGATTTGGGTGAGGACACAGCCCCTCTTTTCTGGCTaGCCAGACTTGCTTCTCCAG +
Preference number: 5 (lower is better)
Translates to: TSGNYGSRIQDEIWVRTQPLFSG*PDLLLQ
Trigger: CTGGAGAAGCAAGTCTGGCAAGCCAGAAAAGAGGGG...CTGTGTCCTCACCCAAATCTCATCTTGAATTCTACTCCCATAATTCCCAGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454381.3
CDS-3UTR CAA 90 bp AAAATAGCCCCCATAATTCAAATTATTTCCCACCAGGTCCCTCCCACAACACCTGGAAGATGGTGGCCTTaGTCTCATAGCTCCACTAGG +
Preference number: 5 (lower is better)
Translates to: KIAPIIQIISHQVPPTTPGRWWP*SHSSTR
Trigger: CCTAGTGGAGCTATGAGACAAAGGCCACCATCTTCC...AGGTGTTGTGGGAGGGACCTGGTGGGAAATAATTTGAATTATGGGGGCTATTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454381.3
CDS-3UTR CAA 90 bp AAAATAGCCCCCATAATTCAAATTATTTCCCACCAGGTCCCTCCCACAACACCTAAGCTCCCAACACAGTaGTACCAGAAGTGGCACAGA +
Preference number: 5 (lower is better)
Translates to: KIAPIIQIISHQVPPTTPKLPTQ*YQKWHR
Trigger: TCTGTGCCACTTCTGGTACAACTGTGTTGGGAGCTT...AGGTGTTGTGGGAGGGACCTGGTGGGAAATAATTTGAATTATGGGGGCTATTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454381.3
CDS-3UTR CAA 90 bp AAAATAGCCCCCATAATTCAAATTATTTCCCACCAGGTCCCTCCCACAACACCTCCCAAACCTCAATTCTaGACTTGTGTGCCCACATGC +
Preference number: 5 (lower is better)
Translates to: KIAPIIQIISHQVPPTTPPKPQF*TCVPTC
Trigger: GCATGTGGGCACACAAGTCAAGAATTGAGGTTTGGG...AGGTGTTGTGGGAGGGACCTGGTGGGAAATAATTTGAATTATGGGGGCTATTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454381.3
CDS-3UTR CAA 90 bp ACATCTGGGAATTATGGGAGTAGAATTCAAGATGAGATTTGGGTGAGGACACAGTGCTGCTCCTTCCACTaGGGTCATTCTTCTCCCCTT +
Preference number: 5 (lower is better)
Translates to: TSGNYGSRIQDEIWVRTQCCSFH*GHSSPL
Trigger: AAGGGGAGAAGAATGACCCAAGTGGAAGGAGCAGCA...CTGTGTCCTCACCCAAATCTCATCTTGAATTCTACTCCCATAATTCCCAGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454381.3
CDS-3UTR CAA 90 bp ATTCTTGACTTGTGTGCCCACATGCTCAACACCACATGGAAGCTGCTAAGGTTTGTCACATCCAGACTTTaGTGTCACCTCACATCCAGA +
Preference number: 5 (lower is better)
Translates to: ILDLCAHMLNTTWKLLRFVTSRL*CHLTSR
Trigger: TCTGGATGTGAGGTGACACAAAAGTCTGGATGTGAC...AAACCTTAGCAGCTTCCATGTGGTGTTGAGCATGTGGGCACACAAGTCAAGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454381.3
CDS-3UTR CAA 90 bp CCAAATCTCACGTGCTCACATTTCAAAACCAATCACACCTTCCCAACAGTCCCCCATCCAAGTCACCTCTaGAATGCTTTGCTGCTTAAA +
Preference number: 5 (lower is better)
Translates to: PNLTCSHFKTNHTFPTVPHPSHL*NALLLK
Trigger: TTTAAGCAGCAAAGCATTCAAGAGGTGACTTGGATG...GGGGACTGTTGGGAAGGTGTGATTGGTTTTGAAATGTGAGCACGTGAGATTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454381.3
CDS CCA 90 bp ACCATTCAGCACAACCCCATCCACAAGAACAGCATTCTTCTTACTTaGAATCATCTCTTGTTGATCAATATCTCCGTCCACAGGACACTG +
Preference number: 5 (lower is better)
Translates to: TIQHNPIHKNSILLT*NHLLLINISVHRTL
Trigger: CAGTGTCCTGTGGACGGAGATATTGATCAACAAGAGATGATTCCAAGTAAGAAGAATGCTGTTCTTGTGGATGGGGTTGTGCTGAATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282538.10
ENST00000454381.3
CDS-3UTR CAA 90 bp ATCTCCCACTGCGTCCCGCCCACAACATCTGGGAATTATGGGAGTAGAATTCAAATTTTCCCTATTGTCTaGAGGATTATCATTCAGCTC +
Preference number: 5 (lower is better)
Translates to: ISHCVPPTTSGNYGSRIQIFPIV*RIIIQL
Trigger: GAGCTGAATGATAATCCTCAAGACAATAGGGAAAAT...TTGAATTCTACTCCCATAATTCCCAGATGTTGTGGGCGGGACGCAGTGGGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454381.3
CDS-3UTR CAA 90 bp ACATCTGGGAATTATGGGAGTAGAATTCAAGATGAGATTTGGGTGAGGACACAGTGGAATCATCTCTTGTaGATCAATATCTCCGTCCAC +
Preference number: 5 (lower is better)
Translates to: TSGNYGSRIQDEIWVRTQWNHLL*INISVH
Trigger: GTGGACGGAGATATTGATCAACAAGAGATGATTCCA...CTGTGTCCTCACCCAAATCTCATCTTGAATTCTACTCCCATAATTCCCAGATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454381.3
CDS-3UTR CAA 90 bp CATACCCGAGACTGGGAAGAAAAAGGTTTAATTGAACTTATAGTTCCACAGTTCTTCATTGCATACATATaGGACACTGAGCCACCTGGG +
Preference number: 5 (lower is better)
Translates to: HTRDWEEKGLIELIVPQFFIAYI*DTEPPG
Trigger: CCCAGGTGGCTCAGTGTCCAATATGTATGCAATGAA...GAACTGTGGAACTATAAGTTCAATTAAACCTTTTTCTTCCCAGTCTCGGGTATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454381.3
CDS-3UTR CAA 90 bp ACATCTGGGAATTATGGGAGTAGAATTCAAGATGAGATTTGGGTGAGGACACAGACTTGGAATCATCTCTaGTTGATCAATATCTCCGTC +
Preference number: 5 (lower is better)
Translates to: TSGNYGSRIQDEIWVRTQTWNHL*LINISV
Trigger: GACGGAGATATTGATCAACAAGAGATGATTCCAAGT...CTGTGTCCTCACCCAAATCTCATCTTGAATTCTACTCCCATAATTCCCAGATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454381.3
CDS-3UTR CAA 90 bp ACATCTGGGAATTATGGGAGTAGAATTCAAGATGAGATTTGGGTGAGGACACAGTCACACACCTTCTCATaGACATCTGTAGCTTTCAAA +
Preference number: 5 (lower is better)
Translates to: TSGNYGSRIQDEIWVRTQSHTFS*TSVAFK
Trigger: TTTGAAAGCTACAGATGTCAATGAGAAGGTGTGTGA...CTGTGTCCTCACCCAAATCTCATCTTGAATTCTACTCCCATAATTCCCAGATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454381.3
CDS-3UTR CAA 90 bp ACATCTGGGAATTATGGGAGTAGAATTCAAGATGAGATTTGGGTGAGGACACAGAAGTCCAGCATACAATaGGTTGAAAAATCTTGGGTG +
Preference number: 5 (lower is better)
Translates to: TSGNYGSRIQDEIWVRTQKSSIQ*VEKSWV
Trigger: CACCCAAGATTTTTCAACCAATTGTATGCTGGACTT...CTGTGTCCTCACCCAAATCTCATCTTGAATTCTACTCCCATAATTCCCAGATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454381.3
CDS-3UTR CAA 90 bp ACATCTGGGAATTATGGGAGTAGAATTCAAGATGAGATTTGGGTGAGGACACAGCAACTCACAGATCATTaGCTTTTCAGGTCCTTAATG +
Preference number: 5 (lower is better)
Translates to: TSGNYGSRIQDEIWVRTQQLTDH*LFRSLM
Trigger: CATTAAGGACCTGAAAAGCAAATGATCTGTGAGTTG...CTGTGTCCTCACCCAAATCTCATCTTGAATTCTACTCCCATAATTCCCAGATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454381.3
CDS-3UTR CAA 90 bp ACATCTGGGAATTATGGGAGTAGAATTCAAGATGAGATTTGGGTGAGGACACAGCATTTAAAACTAAATTaGGCTATGGCCTGTCCACCA +
Preference number: 5 (lower is better)
Translates to: TSGNYGSRIQDEIWVRTQHLKLN*AMACPP
Trigger: TGGTGGACAGGCCATAGCCAAATTTAGTTTTAAATG...CTGTGTCCTCACCCAAATCTCATCTTGAATTCTACTCCCATAATTCCCAGATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454381.3
CDS-3UTR CAA 90 bp CATACCCGAGACTGGGAAGAAAAAGGTTTAATTGAACTTATAGTTCCACAGTTCATGGGGATACAGATATaGGGTAAATACAGCCATTCC +
Preference number: 5 (lower is better)
Translates to: HTRDWEEKGLIELIVPQFMGIQI*GKYSHS
Trigger: GGAATGGCTGTATTTACCCAATATCTGTATCCCCAT...GAACTGTGGAACTATAAGTTCAATTAAACCTTTTTCTTCCCAGTCTCGGGTATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454381.3
CDS GCA 72 bp TATCTCCGTCCACAGGACACTGGCGGTCCGAGTCGCTaGTCATCTCCGCTCCCCCACTCCAGGCTGCCCCGG +
Preference number: 6 (lower is better)
Translates to: YLRPQDTGGPSR*SSPLPHSRLPR
Trigger: CCGGGGCAGCCTGGAGTGGGGGAGCGGAGATGAGCAGCGACTCGGACCGCCAGTGTCCTGTGGACGGAGATA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282538.10
ENST00000454381.3
CDS GCA 72 bp CCACAGAGTCAGCCCTGTGGATGCCATGCAGAAGCTTaGGGTGCTTCCTCGACATCAAAGCTGAGCCACCCC +
Preference number: 6 (lower is better)
Translates to: PQSQPCGCHAEA*GASSTSKLSHP
Trigger: GGGGTGGCTCAGCTTTGATGTCGAGGAAGCACCGCAAGCTTCTGCATGGCATCCACAGGGCTGACTCTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282538.10
ENST00000454381.3
CDS CAA 72 bp GCCACAGAGTCAGCCCTGTGGATGCCATGCAGAAGCTaGCGGTGCTTCCTCGACATCAAAGCTGAGCCACCC +
Preference number: 6 (lower is better)
Translates to: ATESALWMPCRS*RCFLDIKAEPP
Trigger: GGGTGGCTCAGCTTTGATGTCGAGGAAGCACCGCAAGCTTCTGCATGGCATCCACAGGGCTGACTCTGTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282538.10
ENST00000454381.3
CDS TCA 72 bp TCATCCAGGAGGAAGTCCATGTCCTCCCGGCTCACTTaGGGGCTGATCACCACCTGGCGGAAGAAGTTGACC +
Preference number: 6 (lower is better)
Translates to: SSRRKSMSSRLT*GLITTWRKKLT
Trigger: GGTCAACTTCTTCCGCCAGGTGGTGATCAGCCCTCAAGTGAGCCGGGAGGACATGGACTTCCTCCTGGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282538.10
ENST00000498387.1
CDS GCA 72 bp GAGTCAGCCCTGTGGATGCCATGCAGAAGCTTGCGGTaGTTCCTCGACATCAAAGCTGAGCCACCCCAAGAA +
Preference number: 6 (lower is better)
Translates to: ESALWMPCRSLR*FLDIKAEPPQE
Trigger: TTCTTGGGGTGGCTCAGCTTTGATGTCGAGGAAGCACCGCAAGCTTCTGCATGGCATCCACAGGGCTGACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282538.10
ENST00000454381.3
CDS TCA 72 bp ATGCAGAAGCTTGCGGTGCTTCCTCGACATCAAAGCTaGGCCACCCCAAGAAGCATCTACATGAAGCCAGAG +
Preference number: 6 (lower is better)
Translates to: MQKLAVLPRHQS*ATPRSIYMKPE
Trigger: CTCTGGCTTCATGTAGATGCTTCTTGGGGTGGCTCAGCTTTGATGTCGAGGAAGCACCGCAAGCTTCTGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282538.10
ENST00000454381.3
CDS GCA 72 bp TACATGAAGCCAGAGGCTGTGCCTCTCGCAGATGTCTaGTATTTCATCCAGAGGGTCAAAAGCTCCCAACAC +
Preference number: 6 (lower is better)
Translates to: YMKPEAVPLADV*YFIQRVKSSQH
Trigger: GTGTTGGGAGCTTTTGACCCTCTGGATGAAATAGCAGACATCTGCGAGAGGCACAGCCTCTGGCTTCATGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282538.10
ENST00000454381.3
CDS GCA 72 bp TGTACCCAGGGCCTTCCAGGTCATCCAGAACTTGAATaGATCTGGTCTTCTGCTACACTGGATAGACTTGTC +
Preference number: 6 (lower is better)
Translates to: CTQGLPGHPELE*IWSSATLDRLV
Trigger: GACAAGTCTATCCAGTGTAGCAGAAGACCAGATGCATTCAAGTTCTGGATGACCTGGAAGGCCCTGGGTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282538.10
ENST00000454381.3
CDS CAA 90 bp TCTTCAAGGCCTAATGTACCCAGGGCCTTCCAGGTCATCCAGAACTaGAATGCATCTGGTCTTCTGCTACACTGGATAGACTTGTCTCCT +
Preference number: 6 (lower is better)
Translates to: SSRPNVPRAFQVIQN*NASGLLLHWIDLSP
Trigger: AGGAGACAAGTCTATCCAGTGTAGCAGAAGACCAGATGCATTCAAGTTCTGGATGACCTGGAAGGCCCTGGGTACATTAGGCCTTGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282538.10
ENST00000454381.3
CDS TCA 72 bp ATATTGGCATATTCAGGCTGTGAGATGATAACAGCGTaGCCTGCTTGGGCTTCACTAACCAGCACTACTATG +
Preference number: 6 (lower is better)
Translates to: ILAYSGCEMITA*PAWASLTSTTM
Trigger: CATAGTAGTGCTGGTTAGTGAAGCCCAAGCAGGTCACGCTGTTATCATCTCACAGCCTGAATATGCCAATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498387.1
CDS CAA 90 bp GACCATTCAGCACAACCCCATCCACAAGAACAGCATTCTTCTTACTaGGAATCATCTCTTGTTGATCAATATCTCCGTCCACAGGACACT +
Preference number: 6 (lower is better)
Translates to: DHSAQPHPQEQHSSY*ESSLVDQYLRPQDT
Trigger: AGTGTCCTGTGGACGGAGATATTGATCAACAAGAGATGATTCCAAGTAAGAAGAATGCTGTTCTTGTGGATGGGGTTGTGCTGAATGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282538.10
ENST00000454381.3
CDS GCA 72 bp TGGGGACACCTCATACGTATAAACACTTGGATTCAATaGTTCGGTCATAAATCGGGCCACCAAGGAGTAATA +
Preference number: 6 (lower is better)
Translates to: WGHLIRINTWIQ*FGHKSGHQGVI
Trigger: TATTACTCCTTGGTGGCCCGATTTATGACCGAAGCATTGAATCCAAGTGTTTATACGTATGAGGTGTCCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282538.10
ENST00000454381.3
CDS CCA 72 bp CACAACCCCATCCACAAGAACAGCATTCTTCTTACTTaGAATCATCTCTTGTTGATCAATATCTCCGTCCAC +
Preference number: 6 (lower is better)
Translates to: HNPIHKNSILLT*NHLLLINISVH
Trigger: GTGGACGGAGATATTGATCAACAAGAGATGATTCCAAGTAAGAAGAATGCTGTTCTTGTGGATGGGGTTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282538.10
ENST00000454381.3