Pregenerated sensors for GADD45GIP1 (Homo sapiens)
Ensembl gene IDs: ENSG00000179271Ensembl transcript IDs: ENST00000316939.3
Found 101 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CATGGTGACGGGTGCCTGGAAGGGGGAGAGGAGTCTGTGAGTCCCTaGAGATTGAGGCTTCCGGTGTCTCCTCCCCCAGTGTGTCATTTC | + |
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Preference number: 1 (lower is better) Translates to: HGDGCLEGGEESVSP*RLRLPVSPPPVCHF Trigger: GAAATGACACACTGGGGGAGGAGACACCGGAAGCCTCAATCTGCAGGGACTCACAGACTCCTCTCCCCCTTCCAGGCACCCGTCACCATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000316939.3 |
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| 3UTR CCA 90 bp | AGGATGAGGGGAAGCTGGAGCCCCAACTTTGATCCTCCATTGGAGTaGCCCAAATCTTTCCATCTAGGGCAAGTCCTGAAAGGCCCAAGG | + |
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Preference number: 1 (lower is better) Translates to: RMRGSWSPNFDPPLE*PKSFHLGQVLKGPR Trigger: CCTTGGGCCTTTCAGGACTTGCCCTAGATGGAAAGATTTGGGCCACTCCAATGGAGGATCAAAGTTGGGGCTCCAGCTTCCCCTCATCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000316939.3 |
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| 3UTR-3UTR CCA 90 bp | TGTCCTCCTAAAGTGGCCCCTGTTCCCATCTCCCGGGCCAGACAGCTGTCCCCCATGGTGACGGGTGCCTaGAAGGGGGAGAGGAGTCTG | + |
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Preference number: 2 (lower is better) Translates to: CPPKVAPVPISRARQLSPMVTGA*KGERSL Trigger: CAGACTCCTCTCCCCCTTCCAGGCACCCGTCACCAT...GGGGGACAGCTGTCTGGCCCGGGAGATGGGAACAGGGGCCACTTTAGGAGGACA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000316939.3 |
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| 3UTR-3UTR TCA 90 bp | CCTGTCCTCCTAAAGTGGCCCCTGTTCCCATCTCCCGGGCCAGACAGCTGTCCCCTGGAGCCCCAACTTTaGTCCTCCATTGGAGTGGCC | + |
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Preference number: 2 (lower is better) Translates to: PVLLKWPLFPSPGPDSCPLEPQL*SSIGVA Trigger: GGCCACTCCAATGGAGGATCAAAGTTGGGGCTCCAG...GGGACAGCTGTCTGGCCCGGGAGATGGGAACAGGGGCCACTTTAGGAGGACAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000316939.3 |
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| 3UTR CAA 90 bp | GACGGGTGCCTGGAAGGGGGAGAGGAGTCTGTGAGTCCCTGCAGATaGAGGCTTCCGGTGTCTCCTCCCCCAGTGTGTCATTTCCAGGCA | + |
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Preference number: 2 (lower is better) Translates to: DGCLEGGEESVSPCR*RLPVSPPPVCHFQA Trigger: TGCCTGGAAATGACACACTGGGGGAGGAGACACCGGAAGCCTCAATCTGCAGGGACTCACAGACTCCTCTCCCCCTTCCAGGCACCCGTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000316939.3 |
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| 3UTR-3UTR GCA 90 bp | AAGCAAACAGTCCAGCTTCCTGTCCTCCTAAAGTGGCCCCTGTTCCCATCTCCCCCTATGGTCTGTGCCTaGTGGGGCTCCCCGCGCCCA | + |
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Preference number: 2 (lower is better) Translates to: KQTVQLPVLLKWPLFPSPPMVCA*WGSPRP Trigger: TGGGCGCGGGGAGCCCCAGCAGGCACAGACCATAGG...GGGAGATGGGAACAGGGGCCACTTTAGGAGGACAGGAAGCTGGACTGTTTGCTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000316939.3 |
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| 3UTR-3UTR CCA 90 bp | GACGGAAAGGCGGCTGCTTGCCTCTCCATCCTCCGAAAAACCCCTGAGGACCCCCCTTGGCCTCCAGCCTaGAGAAGGGCTAACATCAGC | + |
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Preference number: 2 (lower is better) Translates to: DGKAAACLSILRKTPEDPPWPPA*RRANIS Trigger: GCTGATGTTAGCCCTTCTCCAGGCTGGAGGCCAAGG...GGGGTCCTCAGGGGTTTTTCGGAGGATGGAGAGGCAAGCAGCCGCCTTTCCGTC 61% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000316939.3 |
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| 3UTR-3UTR CCA 90 bp | CTTCCTGTCCTCCTAAAGTGGCCCCTGTTCCCATCTCCCGGGCCAGACAGCTGTCCTGCTCAGAGAAGCTaGCAGGACTGGGAGGCGACA | + |
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Preference number: 2 (lower is better) Translates to: LPVLLKWPLFPSPGPDSCPAQRS*QDWEAT Trigger: TGTCGCCTCCCAGTCCTGCCAGCTTCTCTGAGCAGG...ACAGCTGTCTGGCCCGGGAGATGGGAACAGGGGCCACTTTAGGAGGACAGGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316939.3 |
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| 3UTR-3UTR CCA 90 bp | GGCCTCTGTCCCAGCTCTCTGCAGCCAGACGGAAAGGCGGCTGCTTGCCTCTCCTTGAGTACAGCCAAGTaGGGGATTCCCCAGCTCTTA | + |
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Preference number: 2 (lower is better) Translates to: GLCPSSLQPDGKAAACLSLSTAK*GIPQLL Trigger: TAAGAGCTGGGGAATCCCCCACTTGGCTGTACTCAA...GGAGAGGCAAGCAGCCGCCTTTCCGTCTGGCTGCAGAGAGCTGGGACAGAGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000316939.3 |
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| 3UTR-3UTR CCA 90 bp | CTTCCTGTCCTCCTAAAGTGGCCCCTGTTCCCATCTCCCGGGCCAGACAGCTGTGTCATTTCCAGGCAGTaGACCCCAGCCCAACGTTAC | + |
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Preference number: 2 (lower is better) Translates to: LPVLLKWPLFPSPGPDSCVISRQ*TPAQRY Trigger: GTAACGTTGGGCTGGGGTCCACTGCCTGGAAATGAC...ACAGCTGTCTGGCCCGGGAGATGGGAACAGGGGCCACTTTAGGAGGACAGGAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000316939.3 |
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| 3UTR-3UTR TCA 90 bp | AAGCAAACAGTCCAGCTTCCTGTCCTCCTAAAGTGGCCCCTGTTCCCATCTCCCCAGAGAGGCACACCTTaGGAGGACGCAGATCTCTTC | + |
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Preference number: 2 (lower is better) Translates to: KQTVQLPVLLKWPLFPSPQRGTP*EDADLF Trigger: GAAGAGATCTGCGTCCTCTCAAGGTGTGCCTCTCTG...GGGAGATGGGAACAGGGGCCACTTTAGGAGGACAGGAAGCTGGACTGTTTGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000316939.3 |
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| 3UTR GCA 72 bp | CCCAGCTCTCTGCAGCCAGACGGAAAGGCGGCTGCTTaGCTCTCCATCCTCCGAAAAACCCCTGAGGACCCC | + |
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Preference number: 3 (lower is better) Translates to: PSSLQPDGKAAA*LSILRKTPEDP Trigger: GGGGTCCTCAGGGGTTTTTCGGAGGATGGAGAGGCAAGCAGCCGCCTTTCCGTCTGGCTGCAGAGAGCTGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000316939.3 |
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| 3UTR-3UTR CAA 90 bp | CTTCCTGTCCTCCTAAAGTGGCCCCTGTTCCCATCTCCCGGGCCAGACAGCTGTGCTGGAGCCCCAACTTaGATCCTCCATTGGAGTGGC | + |
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Preference number: 3 (lower is better) Translates to: LPVLLKWPLFPSPGPDSCAGAPT*ILHWSG Trigger: GCCACTCCAATGGAGGATCAAAGTTGGGGCTCCAGC...ACAGCTGTCTGGCCCGGGAGATGGGAACAGGGGCCACTTTAGGAGGACAGGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000316939.3 |
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| 3UTR CCA 72 bp | AACAAGCAAACAGTCCAGCTTCCTGTCCTCCTAAAGTaGCCCCTGTTCCCATCTCCCGGGCCAGACAGCTGT | + |
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Preference number: 3 (lower is better) Translates to: NKQTVQLPVLLK*PLFPSPGPDSC Trigger: ACAGCTGTCTGGCCCGGGAGATGGGAACAGGGGCCACTTTAGGAGGACAGGAAGCTGGACTGTTTGCTTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316939.3 |
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| 3UTR-3UTR CAA 90 bp | GAAGCTGGAGCCCCAACTTTGATCCTCCATTGGAGTGGCCCAAATCTTTCCATCGCTAACATCAGCTCATaGTCAAGGCCACCCCCACCC | + |
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Preference number: 3 (lower is better) Translates to: EAGAPTLILHWSGPNLSIANISS*SRPPPP Trigger: GGGTGGGGGTGGCCTTGACAATGAGCTGATGTTAGC...GATGGAAAGATTTGGGCCACTCCAATGGAGGATCAAAGTTGGGGCTCCAGCTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000316939.3 |
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| 3UTR GCA 72 bp | CACACCTTGAGAGGACGCAGATCTCTTCAGGGGTACTaGCAGGTAGCAGGCTTTATTGGGAAGGGACAAAGC | + |
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Preference number: 3 (lower is better) Translates to: HTLRGRRSLQGY*QVAGFIGKGQS Trigger: GCTTTGTCCCTTCCCAATAAAGCCTGCTACCTGGCAGTACCCCTGAAGAGATCTGCGTCCTCTCAAGGTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316939.3 |
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| 3UTR-3UTR CAA 90 bp | GAAGCTGGAGCCCCAACTTTGATCCTCCATTGGAGTGGCCCAAATCTTTCCATCCCAGAGAGGCACACCTaGAGAGGACGCAGATCTCTT | + |
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Preference number: 3 (lower is better) Translates to: EAGAPTLILHWSGPNLSIPERHT*RGRRSL Trigger: AAGAGATCTGCGTCCTCTCAAGGTGTGCCTCTCTGG...GATGGAAAGATTTGGGCCACTCCAATGGAGGATCAAAGTTGGGGCTCCAGCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316939.3 |
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| 3UTR-3UTR CAA 90 bp | AAGCAAACAGTCCAGCTTCCTGTCCTCCTAAAGTGGCCCCTGTTCCCATCTCCCAACTTTGATCCTCCATaGGAGTGGCCCAAATCTTTC | + |
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Preference number: 3 (lower is better) Translates to: KQTVQLPVLLKWPLFPSPNFDPP*EWPKSF Trigger: GAAAGATTTGGGCCACTCCAATGGAGGATCAAAGTT...GGGAGATGGGAACAGGGGCCACTTTAGGAGGACAGGAAGCTGGACTGTTTGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316939.3 |
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| 3UTR CCA 72 bp | GGAAGCTGGAGCCCCAACTTTGATCCTCCATTGGAGTaGCCCAAATCTTTCCATCTAGGGCAAGTCCTGAAA | + |
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Preference number: 3 (lower is better) Translates to: GSWSPNFDPPLE*PKSFHLGQVLK Trigger: TTTCAGGACTTGCCCTAGATGGAAAGATTTGGGCCACTCCAATGGAGGATCAAAGTTGGGGCTCCAGCTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316939.3 |
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| CDS-3UTR GCA 90 bp | TGTCCTCCTAAAGTGGCCCCTGTTCCCATCTCCCGGGCCAGACAGCTGTCCCCCTCCAGCTCCCGCAGCTaGTCCGGCGACGGCCATAAC | + |
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Preference number: 4 (lower is better) Translates to: CPPKVAPVPISRARQLSPSSSRS*SGDGHN Trigger: GTTATGGCCGTCGCCGGAGCAGCTGCGGGAGCTGGA...GGGGGACAGCTGTCTGGCCCGGGAGATGGGAACAGGGGCCACTTTAGGAGGACA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000316939.3 |
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| CDS-3UTR GCA 90 bp | TGTCCTCCTAAAGTGGCCCCTGTTCCCATCTCCCGGGCCAGACAGCTGTCCCCCGGGTGCCCCAGAGGCTaGTGGGTCTTGAGCCACAGC | + |
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Preference number: 4 (lower is better) Translates to: CPPKVAPVPISRARQLSPGCPRG*WVLSHS Trigger: GCTGTGGCTCAAGACCCAGCAGCCTCTGGGGCACCC...GGGGGACAGCTGTCTGGCCCGGGAGATGGGAACAGGGGCCACTTTAGGAGGACA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000316939.3 |
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| CDS-3UTR GCA 90 bp | CCTGTCCTCCTAAAGTGGCCCCTGTTCCCATCTCCCGGGCCAGACAGCTGTCCCCCACACCTAGTAGGCTaGGTGCCTGTCGCACGGACG | + |
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Preference number: 4 (lower is better) Translates to: PVLLKWPLFPSPGPDSCPPHLVG*VPVART Trigger: CGTCCGTGCGACAGGCACGCAGCCTACTAGGTGTGG...GGGACAGCTGTCTGGCCCGGGAGATGGGAACAGGGGCCACTTTAGGAGGACAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000316939.3 |
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| CDS-3UTR GCA 90 bp | TGTCCTCCTAAAGTGGCCCCTGTTCCCATCTCCCGGGCCAGACAGCTGTCCCCCTGCTCTTCGGCCAGCTaGTTCACCCGCAGCGACTCC | + |
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Preference number: 4 (lower is better) Translates to: CPPKVAPVPISRARQLSPCSSAS*FTRSDS Trigger: GGAGTCGCTGCGGGTGAAGCAGCTGGCCGAAGAGCA...GGGGGACAGCTGTCTGGCCCGGGAGATGGGAACAGGGGCCACTTTAGGAGGACA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000316939.3 |
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| CDS-3UTR GCA 90 bp | TCTGTGAGTCCCTGCAGATTGAGGCTTCCGGTGTCTCCTCCCCCAGTGTGTCATACCCGCAGCGACTCCTaGATGGTCGCCAGGCTCGGG | + |
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Preference number: 4 (lower is better) Translates to: SVSPCRLRLPVSPPPVCHTRSDS*MVARLG Trigger: CCCGAGCCTGGCGACCATGCAGGAGTCGCTGCGGGT...ATGACACACTGGGGGAGGAGACACCGGAAGCCTCAATCTGCAGGGACTCACAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316939.3 |
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| CDS-3UTR GCA 90 bp | CTTCCTGTCCTCCTAAAGTGGCCCCTGTTCCCATCTCCCGGGCCAGACAGCTGTAGGCATGGTGACGGGTaGCTGGAAGGGGGAGAGGAG | + |
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Preference number: 4 (lower is better) Translates to: LPVLLKWPLFPSPGPDSCRHGDG*LEGGEE Trigger: CTCCTCTCCCCCTTCCAGGCACCCGTCACCATGCCT...ACAGCTGTCTGGCCCGGGAGATGGGAACAGGGGCCACTTTAGGAGGACAGGAAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000316939.3 |
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| CDS-3UTR CCA 90 bp | CTCTGCAGCCAGACGGAAAGGCGGCTGCTTGCCTCTCCATCCTCCGAAAAACCCGAAGCGGGCACTCCTTaGGTCCACCTGGTAGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: LCSQTERRLLASPSSEKPEAGTP*VHLVAQ Trigger: CTGGGCTACCAGGTGGACCCAAGGAGTGCCCGCTTC...GGGTTTTTCGGAGGATGGAGAGGCAAGCAGCCGCCTTTCCGTCTGGCTGCAGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316939.3 |
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| CDS-3UTR CCA 90 bp | CTCTGCAGCCAGACGGAAAGGCGGCTGCTTGCCTCTCCATCCTCCGAAAAACCCTCCTGGAGCAGCTCCTaGAAGCGGGCACTCCTTGGG | + |
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Preference number: 4 (lower is better) Translates to: LCSQTERRLLASPSSEKPSWSSS*KRALLG Trigger: CCCAAGGAGTGCCCGCTTCCAGGAGCTGCTCCAGGA...GGGTTTTTCGGAGGATGGAGAGGCAAGCAGCCGCCTTTCCGTCTGGCTGCAGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316939.3 |
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| CDS-3UTR CCA 90 bp | GGGGACCCAGAGAGGCACACCTTGAGAGGACGCAGATCTCTTCAGGGGTACTGCCTGGGAGGCGACAGATaGGCCCCTCTTGGCCTCTGT | + |
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Preference number: 4 (lower is better) Translates to: GDPERHTLRGRRSLQGYCLGGDR*APLGLC Trigger: ACAGAGGCCAAGAGGGGCCCATCTGTCGCCTCCCAG...GCAGTACCCCTGAAGAGATCTGCGTCCTCTCAAGGTGTGCCTCTCTGGGTCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000316939.3 |
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| CDS-3UTR GCA 90 bp | GAACCAGGGGACCCAGAGAGGCACACCTTGAGAGGACGCAGATCTCTTCAGGGGATGCACTCTGCGATGTaGTGCTCCCTCTCCCGACGC | + |
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Preference number: 4 (lower is better) Translates to: EPGDPERHTLRGRRSLQGMHSAM*CSLSRR Trigger: GCGTCGGGAGAGGGAGCAGCACATCGCAGAGTGCAT...CCCCTGAAGAGATCTGCGTCCTCTCAAGGTGTGCCTCTCTGGGTCCCCTGGTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000316939.3 |
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| CDS-3UTR GCA 90 bp | CTTCCTGTCCTCCTAAAGTGGCCCCTGTTCCCATCTCCCGGGCCAGACAGCTGTCAACGTTACAAGGACTaGTTCTCCCCGGCCCCCACC | + |
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Preference number: 4 (lower is better) Translates to: LPVLLKWPLFPSPGPDSCQRYKD*FSPAPT Trigger: GGTGGGGGCCGGGGAGAAGCAGTCCTTGTAACGTTG...ACAGCTGTCTGGCCCGGGAGATGGGAACAGGGGCCACTTTAGGAGGACAGGAAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000316939.3 |
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| CDS-3UTR CCA 90 bp | TGTCCTCCTAAAGTGGCCCCTGTTCCCATCTCCCGGGCCAGACAGCTGTCCCCCGTCATTTCCAGGCAGTaGACCCCAGCCCAACGTTAC | + |
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Preference number: 4 (lower is better) Translates to: CPPKVAPVPISRARQLSPVISRQ*TPAQRY Trigger: GTAACGTTGGGCTGGGGTCCACTGCCTGGAAATGAC...GGGGGACAGCTGTCTGGCCCGGGAGATGGGAACAGGGGCCACTTTAGGAGGACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000316939.3 |
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| CDS-3UTR CCA 90 bp | GGGGACCCAGAGAGGCACACCTTGAGAGGACGCAGATCTCTTCAGGGGTACTGCATGGTGACGGGTGCCTaGAAGGGGGAGAGGAGTCTG | + |
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Preference number: 4 (lower is better) Translates to: GDPERHTLRGRRSLQGYCMVTGA*KGERSL Trigger: CAGACTCCTCTCCCCCTTCCAGGCACCCGTCACCAT...GCAGTACCCCTGAAGAGATCTGCGTCCTCTCAAGGTGTGCCTCTCTGGGTCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000316939.3 |
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| CDS-3UTR CCA 90 bp | GAACCAGGGGACCCAGAGAGGCACACCTTGAGAGGACGCAGATCTCTTCAGGGGCCTGTCCTCCTAAAGTaGCCCCTGTTCCCATCTCCC | + |
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Preference number: 4 (lower is better) Translates to: EPGDPERHTLRGRRSLQGPVLLK*PLFPSP Trigger: GGGAGATGGGAACAGGGGCCACTTTAGGAGGACAGG...CCCCTGAAGAGATCTGCGTCCTCTCAAGGTGTGCCTCTCTGGGTCCCCTGGTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000316939.3 |
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| CDS-3UTR GCA 90 bp | GAACCAGGGGACCCAGAGAGGCACACCTTGAGAGGACGCAGATCTCTTCAGGGGCAGTTCTCCCGCTGCTaGTGCTGCCAGTTCACAATC | + |
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Preference number: 4 (lower is better) Translates to: EPGDPERHTLRGRRSLQGQFSRC*CCQFTI Trigger: GATTGTGAACTGGCAGCAGCAGCAGCGGGAGAACTG...CCCCTGAAGAGATCTGCGTCCTCTCAAGGTGTGCCTCTCTGGGTCCCCTGGTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000316939.3 |
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| CDS-3UTR GCA 90 bp | GCACACCTTGAGAGGACGCAGATCTCTTCAGGGGTACTGCCAGGTAGCAGGCTTCACAGCTGCAGCCAATaGAGCAGCTCGCGCCTCCTT | + |
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Preference number: 4 (lower is better) Translates to: AHLERTQISSGVLPGSRLHSCSQ*SSSRLL Trigger: AAGGAGGCGCGAGCTGCTGCATTGGCTGCAGCTGTG...AAGCCTGCTACCTGGCAGTACCCCTGAAGAGATCTGCGTCCTCTCAAGGTGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316939.3 |
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| CDS-3UTR GCA 90 bp | CTCTGCAGCCAGACGGAAAGGCGGCTGCTTGCCTCTCCATCCTCCGAAAAACCCGAGTCTGTGAGTCCCTaGAGATTGAGGCTTCCGGTG | + |
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Preference number: 4 (lower is better) Translates to: LCSQTERRLLASPSSEKPESVSP*RLRLPV Trigger: CACCGGAAGCCTCAATCTGCAGGGACTCACAGACTC...GGGTTTTTCGGAGGATGGAGAGGCAAGCAGCCGCCTTTCCGTCTGGCTGCAGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316939.3 |
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| CDS-3UTR CCA 90 bp | CCATTGGAGTGGCCCAAATCTTTCCATCTAGGGCAAGTCCTGAAAGGCCCAAGGGCAGCGACTCCTGCATaGTCGCCAGGCTCGGGTACC | + |
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Preference number: 4 (lower is better) Translates to: PLEWPKSFHLGQVLKGPRAATPA*SPGSGT Trigger: GGTACCCGAGCCTGGCGACCATGCAGGAGTCGCTGC...CCTTGGGCCTTTCAGGACTTGCCCTAGATGGAAAGATTTGGGCCACTCCAATGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316939.3 |
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| CDS-3UTR CCA 90 bp | CTCTGCAGCCAGACGGAAAGGCGGCTGCTTGCCTCTCCATCCTCCGAAAAACCCCCAGCTCTTAAGTATTaGGGGAGGAACCAGGGGACC | + |
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Preference number: 4 (lower is better) Translates to: LCSQTERRLLASPSSEKPPALKY*GRNQGT Trigger: GGTCCCCTGGTTCCTCCCCCAATACTTAAGAGCTGG...GGGTTTTTCGGAGGATGGAGAGGCAAGCAGCCGCCTTTCCGTCTGGCTGCAGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000316939.3 |
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| CDS-3UTR CCA 90 bp | TCTGTGAGTCCCTGCAGATTGAGGCTTCCGGTGTCTCCTCCCCCAGTGTGTCATCCTGCTCAGAGAAGCTaGCAGGACTGGGAGGCGACA | + |
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Preference number: 4 (lower is better) Translates to: SVSPCRLRLPVSPPPVCHPAQRS*QDWEAT Trigger: TGTCGCCTCCCAGTCCTGCCAGCTTCTCTGAGCAGG...ATGACACACTGGGGGAGGAGACACCGGAAGCCTCAATCTGCAGGGACTCACAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316939.3 |
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| CDS-3UTR GCA 90 bp | TCTGTGAGTCCCTGCAGATTGAGGCTTCCGGTGTCTCCTCCCCCAGTGTGTCATTCCCAGTTCTCCCGCTaGTGCTGCTGCCAGTTCACA | + |
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Preference number: 4 (lower is better) Translates to: SVSPCRLRLPVSPPPVCHSQFSR*CCCQFT Trigger: TGTGAACTGGCAGCAGCAGCAGCGGGAGAACTGGGA...ATGACACACTGGGGGAGGAGACACCGGAAGCCTCAATCTGCAGGGACTCACAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316939.3 |
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| CDS-3UTR CCA 90 bp | AGGGGAAGCTGGAGCCCCAACTTTGATCCTCCATTGGAGTGGCCCAAATCTTTCCAAAGCCTCAGGAGCTaGGTGCCCCAGAGGCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: RGSWSPNFDPPLEWPKSFQSLRS*VPQRLL Trigger: CAGCAGCCTCTGGGGCACCCAGCTCCTGAGGCTTTG...GAAAGATTTGGGCCACTCCAATGGAGGATCAAAGTTGGGGCTCCAGCTTCCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000316939.3 |
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| CDS-3UTR CCA 90 bp | CTTCCTGTCCTCCTAAAGTGGCCCCTGTTCCCATCTCCCGGGCCAGACAGCTGTAGGATGAGGGGAAGCTaGAGCCCCAACTTTGATCCT | + |
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Preference number: 4 (lower is better) Translates to: LPVLLKWPLFPSPGPDSCRMRGS*SPNFDP Trigger: AGGATCAAAGTTGGGGCTCCAGCTTCCCCTCATCCT...ACAGCTGTCTGGCCCGGGAGATGGGAACAGGGGCCACTTTAGGAGGACAGGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000316939.3 |
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| CDS-3UTR CCA 90 bp | CCTCCATTGGAGTGGCCCAAATCTTTCCATCTAGGGCAAGTCCTGAAAGGCCCAAGAAGCTGGCAGGACTaGGAGGCGACAGATGGGCCC | + |
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Preference number: 4 (lower is better) Translates to: PPLEWPKSFHLGQVLKGPRSWQD*EATDGP Trigger: GGGCCCATCTGTCGCCTCCCAGTCCTGCCAGCTTCT...TGGGCCTTTCAGGACTTGCCCTAGATGGAAAGATTTGGGCCACTCCAATGGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316939.3 |
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| CDS-3UTR GCA 90 bp | CCATTGGAGTGGCCCAAATCTTTCCATCTAGGGCAAGTCCTGAAAGGCCCAAGGCTCTCCCGACGCTTCTaGTCTTCGGCCAGCTGCTTC | + |
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Preference number: 4 (lower is better) Translates to: PLEWPKSFHLGQVLKGPRLSRRF*SSASCF Trigger: GAAGCAGCTGGCCGAAGAGCAGAAGCGTCGGGAGAG...CCTTGGGCCTTTCAGGACTTGCCCTAGATGGAAAGATTTGGGCCACTCCAATGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316939.3 |
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| CDS-3UTR GCA 90 bp | TCTGTGAGTCCCTGCAGATTGAGGCTTCCGGTGTCTCCTCCCCCAGTGTGTCATGTGGCATCTTGGCCATaGACTCTGCGATGTGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: SVSPCRLRLPVSPPPVCHVASWP*TLRCAA Trigger: AGCAGCACATCGCAGAGTGCATGGCCAAGATGCCAC...ATGACACACTGGGGGAGGAGACACCGGAAGCCTCAATCTGCAGGGACTCACAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316939.3 |
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| CDS-3UTR CCA 90 bp | CTTCCTGTCCTCCTAAAGTGGCCCCTGTTCCCATCTCCCGGGCCAGACAGCTGTGGTAGCAGGCTTTATTaGGAAGGGACAAAGCCTCAG | + |
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Preference number: 4 (lower is better) Translates to: LPVLLKWPLFPSPGPDSCGSRLY*EGTKPQ Trigger: CTGAGGCTTTGTCCCTTCCCAATAAAGCCTGCTACC...ACAGCTGTCTGGCCCGGGAGATGGGAACAGGGGCCACTTTAGGAGGACAGGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316939.3 |
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| CDS-3UTR TCA 90 bp | TTGAGAGGACGCAGATCTCTTCAGGGGTACTGCCAGGTAGCAGGCTTTATTGGGCTGGAGCCCCAACTTTaGTCCTCCATTGGAGTGGCC | + |
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Preference number: 4 (lower is better) Translates to: LRGRRSLQGYCQVAGFIGLEPQL*SSIGVA Trigger: GGCCACTCCAATGGAGGATCAAAGTTGGGGCTCCAG...CCCAATAAAGCCTGCTACCTGGCAGTACCCCTGAAGAGATCTGCGTCCTCTCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000316939.3 |
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| CDS-3UTR GCA 90 bp | CTTGAGAGGACGCAGATCTCTTCAGGGGTACTGCCAGGTAGCAGGCTTTATTGGCTTGGCCATGCACTCTaGGATGTGCTGCTCCCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LERTQISSGVLPGSRLYWLGHAL*DVLLPL Trigger: GAGAGGGAGCAGCACATCGCAGAGTGCATGGCCAAG...CCAATAAAGCCTGCTACCTGGCAGTACCCCTGAAGAGATCTGCGTCCTCTCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316939.3 |
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| CDS-3UTR GCA 90 bp | GAAGCTGGAGCCCCAACTTTGATCCTCCATTGGAGTGGCCCAAATCTTTCCATCTCTGTCCCAGCTCTCTaGAGCCAGACGGAAAGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: EAGAPTLILHWSGPNLSISVPAL*SQTERR Trigger: CCGCCTTTCCGTCTGGCTGCAGAGAGCTGGGACAGA...GATGGAAAGATTTGGGCCACTCCAATGGAGGATCAAAGTTGGGGCTCCAGCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316939.3 |
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| CDS-3UTR CCA 90 bp | AGGGGAAGCTGGAGCCCCAACTTTGATCCTCCATTGGAGTGGCCCAAATCTTTCCCTTGGCCTCCAGCCTaGAGAAGGGCTAACATCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RGSWSPNFDPPLEWPKSFPWPPA*RRANIS Trigger: GCTGATGTTAGCCCTTCTCCAGGCTGGAGGCCAAGG...GAAAGATTTGGGCCACTCCAATGGAGGATCAAAGTTGGGGCTCCAGCTTCCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000316939.3 |
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| CDS-3UTR TCA 90 bp | CCATCCTCTTCTAGGATGAGGGGAAGCTGGAGCCCCAACTTTGATCCTCCATTGCAGAGAGGCACACCTTaGGAGGACGCAGATCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PSSSRMRGSWSPNFDPPLQRGTP*EDADLF Trigger: GAAGAGATCTGCGTCCTCTCAAGGTGTGCCTCTCTG...CAATGGAGGATCAAAGTTGGGGCTCCAGCTTCCCCTCATCCTAGAAGAGGATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000316939.3 |
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| CDS-3UTR GCA 90 bp | GAAGCTGGAGCCCCAACTTTGATCCTCCATTGGAGTGGCCCAAATCTTTCCATCGTCTTGAGCCACAGCTaGAGCCAATGCAGCAGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: EAGAPTLILHWSGPNLSIVLSHS*SQCSSS Trigger: CGAGCTGCTGCATTGGCTGCAGCTGTGGCTCAAGAC...GATGGAAAGATTTGGGCCACTCCAATGGAGGATCAAAGTTGGGGCTCCAGCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316939.3 |
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| CDS-3UTR GCA 90 bp | CCATCCTCTTCTAGGATGAGGGGAAGCTGGAGCCCCAACTTTGATCCTCCATTGGGAAAGGCGGCTGCTTaGCTCTCCATCCTCCGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: PSSSRMRGSWSPNFDPPLGKAAA*LSILRK Trigger: TTTTCGGAGGATGGAGAGGCAAGCAGCCGCCTTTCC...CAATGGAGGATCAAAGTTGGGGCTCCAGCTTCCCCTCATCCTAGAAGAGGATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000316939.3 |
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| CDS-3UTR CCA 90 bp | TTGAGAGGACGCAGATCTCTTCAGGGGTACTGCCAGGTAGCAGGCTTTATTGGGTTCTTCTCTAGGTCCTaGAGCAGCTCCTGGAAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: LRGRRSLQGYCQVAGFIGFFSRS*SSSWKR Trigger: CCGCTTCCAGGAGCTGCTCCAGGACCTAGAGAAGAA...CCCAATAAAGCCTGCTACCTGGCAGTACCCCTGAAGAGATCTGCGTCCTCTCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316939.3 |
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| CDS-3UTR GCA 90 bp | TTGAGAGGACGCAGATCTCTTCAGGGGTACTGCCAGGTAGCAGGCTTTATTGGGTTCTCCCGCTGCTGCTaGTGCCAGTTCACAATCATC | + |
|
Preference number: 4 (lower is better) Translates to: LRGRRSLQGYCQVAGFIGFSRCC*CQFTII Trigger: GATGATTGTGAACTGGCAGCAGCAGCAGCGGGAGAA...CCCAATAAAGCCTGCTACCTGGCAGTACCCCTGAAGAGATCTGCGTCCTCTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316939.3 |
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| CDS-3UTR CCA 90 bp | CCATCCTCTTCTAGGATGAGGGGAAGCTGGAGCCCCAACTTTGATCCTCCATTGTCATCTGTGGCATCTTaGCCATGCACTCTGCGATGT | + |
|
Preference number: 4 (lower is better) Translates to: PSSSRMRGSWSPNFDPPLSSVAS*PCTLRC Trigger: ACATCGCAGAGTGCATGGCCAAGATGCCACAGATGA...CAATGGAGGATCAAAGTTGGGGCTCCAGCTTCCCCTCATCCTAGAAGAGGATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000316939.3 |
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| CDS-3UTR CCA 90 bp | CCATCCTCTTCTAGGATGAGGGGAAGCTGGAGCCCCAACTTTGATCCTCCATTGTTGAGTACAGCCAAGTaGGGGATTCCCCAGCTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: PSSSRMRGSWSPNFDPPLLSTAK*GIPQLL Trigger: TAAGAGCTGGGGAATCCCCCACTTGGCTGTACTCAA...CAATGGAGGATCAAAGTTGGGGCTCCAGCTTCCCCTCATCCTAGAAGAGGATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000316939.3 |
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| CDS-3UTR GCA 90 bp | TTGAGAGGACGCAGATCTCTTCAGGGGTACTGCCAGGTAGCAGGCTTTATTGGGTCTCTTCAGGGGTACTaGCAGGTAGCAGGCTTTATT | + |
|
Preference number: 4 (lower is better) Translates to: LRGRRSLQGYCQVAGFIGSLQGY*QVAGFI Trigger: AATAAAGCCTGCTACCTGGCAGTACCCCTGAAGAGA...CCCAATAAAGCCTGCTACCTGGCAGTACCCCTGAAGAGATCTGCGTCCTCTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000316939.3 |
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| CDS-3UTR CCA 90 bp | CCATCCTCTTCTAGGATGAGGGGAAGCTGGAGCCCCAACTTTGATCCTCCATTGGTTCACAATCATCTGTaGCATCTTGGCCATGCACTC | + |
|
Preference number: 4 (lower is better) Translates to: PSSSRMRGSWSPNFDPPLVHNHL*HLGHAL Trigger: GAGTGCATGGCCAAGATGCCACAGATGATTGTGAAC...CAATGGAGGATCAAAGTTGGGGCTCCAGCTTCCCCTCATCCTAGAAGAGGATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000316939.3 |
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| CDS-3UTR CCA 90 bp | AAGCAAACAGTCCAGCTTCCTGTCCTCCTAAAGTGGCCCCTGTTCCCATCTCCCACTTTGATCCTCCATTaGAGTGGCCCAAATCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: KQTVQLPVLLKWPLFPSPTLILH*SGPNLS Trigger: GGAAAGATTTGGGCCACTCCAATGGAGGATCAAAGT...GGGAGATGGGAACAGGGGCCACTTTAGGAGGACAGGAAGCTGGACTGTTTGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316939.3 |
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| CDS-3UTR CCA 90 bp | CCTCCATTGGAGTGGCCCAAATCTTTCCATCTAGGGCAAGTCCTGAAAGGCCCAGATCCTCCATTGGAGTaGCCCAAATCTTTCCATCTA | + |
|
Preference number: 4 (lower is better) Translates to: PPLEWPKSFHLGQVLKGPDPPLE*PKSFHL Trigger: TAGATGGAAAGATTTGGGCCACTCCAATGGAGGATC...TGGGCCTTTCAGGACTTGCCCTAGATGGAAAGATTTGGGCCACTCCAATGGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316939.3 |
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| CDS GCA 90 bp | AGGCTCGGGTACCATTCGCGTTCTTCGGCCTCCAGCTCCCGCAGCTaGTCCGGCGACGGCCATAACGAACCGGGGACCACCCCGGAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: RLGYHSRSSASSSRS*SGDGHNEPGTTPEA Trigger: CGCCTCCGGGGTGGTCCCCGGTTCGTTATGGCCGTCGCCGGAGCAGCTGCGGGAGCTGGAGGCCGAAGAACGCGAATGGTACCCGAGCCT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000316939.3 |
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| CDS GCA 90 bp | GCGATGTGCTGCTCCCTCTCCCGACGCTTCTGCTCTTCGGCCAGCTaGTTCACCCGCAGCGACTCCTGCATGGTCGCCAGGCTCGGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: AMCCSLSRRFCSSAS*FTRSDSCMVARLGY Trigger: GTACCCGAGCCTGGCGACCATGCAGGAGTCGCTGCGGGTGAAGCAGCTGGCCGAAGAGCAGAAGCGTCGGGAGAGGGAGCAGCACATCGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316939.3 |
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| CDS GCA 90 bp | CGACGCTTCTGCTCTTCGGCCAGCTGCTTCACCCGCAGCGACTCCTaGATGGTCGCCAGGCTCGGGTACCATTCGCGTTCTTCGGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RRFCSSASCFTRSDS*MVARLGYHSRSSAS Trigger: GGAGGCCGAAGAACGCGAATGGTACCCGAGCCTGGCGACCATGCAGGAGTCGCTGCGGGTGAAGCAGCTGGCCGAAGAGCAGAAGCGTCG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316939.3 |
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| CDS CCA 90 bp | GCTTCTGCTCTTCGGCCAGCTGCTTCACCCGCAGCGACTCCTGCATaGTCGCCAGGCTCGGGTACCATTCGCGTTCTTCGGCCTCCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: ASALRPAASPAATPA*SPGSGTIRVLRPPA Trigger: AGCTGGAGGCCGAAGAACGCGAATGGTACCCGAGCCTGGCGACCATGCAGGAGTCGCTGCGGGTGAAGCAGCTGGCCGAAGAGCAGAAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316939.3 |
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| CDS-3UTR CAA 90 bp | CCTGTCCTCCTAAAGTGGCCCCTGTTCCCATCTCCCGGGCCAGACAGCTGTCCCTCCTCCTTGAGGCGCTaGCGCTCCTTCTTCTCTAGG | + |
|
Preference number: 5 (lower is better) Translates to: PVLLKWPLFPSPGPDSCPSSLRR*RSFFSR Trigger: CCTAGAGAAGAAGGAGCGCAAGCGCCTCAAGGAGGA...GGGACAGCTGTCTGGCCCGGGAGATGGGAACAGGGGCCACTTTAGGAGGACAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316939.3 |
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| CDS GCA 90 bp | GCCCTCCTCTCCTTGTCAGCCTGGGCCTTCTCCCAGTTCTCCCGCTaGTGCTGCTGCCAGTTCACAATCATCTGTGGCATCTTGGCCATG | + |
|
Preference number: 5 (lower is better) Translates to: ALLSLSAWAFSQFSR*CCCQFTIICGILAM Trigger: CATGGCCAAGATGCCACAGATGATTGTGAACTGGCAGCAGCAGCAGCGGGAGAACTGGGAGAAGGCCCAGGCTGACAAGGAGAGGAGGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316939.3 |
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| CDS CCA 90 bp | CTCCCAGTTCTCCCGCTGCTGCTGCTGCCAGTTCACAATCATCTGTaGCATCTTGGCCATGCACTCTGCGATGTGCTGCTCCCTCTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: LPVLPLLLLPVHNHL*HLGHALCDVLLPLP Trigger: CGGGAGAGGGAGCAGCACATCGCAGAGTGCATGGCCAAGATGCCACAGATGATTGTGAACTGGCAGCAGCAGCAGCGGGAGAACTGGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316939.3 |
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| CDS-3UTR CAA 90 bp | CTTCCTGTCCTCCTAAAGTGGCCCCTGTTCCCATCTCCCGGGCCAGACAGCTGTGCTAACATCAGCTCATaGTCAAGGCCACCCCCACCC | + |
|
Preference number: 5 (lower is better) Translates to: LPVLLKWPLFPSPGPDSCANISS*SRPPPP Trigger: GGGTGGGGGTGGCCTTGACAATGAGCTGATGTTAGC...ACAGCTGTCTGGCCCGGGAGATGGGAACAGGGGCCACTTTAGGAGGACAGGAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000316939.3 |
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| CDS GCA 90 bp | CTCCTCTCCTTGTCAGCCTGGGCCTTCTCCCAGTTCTCCCGCTGCTaGTGCTGCCAGTTCACAATCATCTGTGGCATCTTGGCCATGCAC | + |
|
Preference number: 5 (lower is better) Translates to: LLSLSAWAFSQFSRC*CCQFTIICGILAMH Trigger: GTGCATGGCCAAGATGCCACAGATGATTGTGAACTGGCAGCAGCAGCAGCGGGAGAACTGGGAGAAGGCCCAGGCTGACAAGGAGAGGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316939.3 |
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| CDS CCA 90 bp | TCTCCCGCTGCTGCTGCTGCCAGTTCACAATCATCTGTGGCATCTTaGCCATGCACTCTGCGATGTGCTGCTCCCTCTCCCGACGCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SPAAAAASSQSSVAS*PCTLRCAAPSPDAS Trigger: AGAAGCGTCGGGAGAGGGAGCAGCACATCGCAGAGTGCATGGCCAAGATGCCACAGATGATTGTGAACTGGCAGCAGCAGCAGCGGGAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316939.3 |
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| CDS CCA 90 bp | AGGACGCAGATCTCTTCAGGGGTACTGCCAGGTAGCAGGCTTTATTaGGAAGGGACAAAGCCTCAGGAGCTGGGTGCCCCAGAGGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: RTQISSGVLPGSRLY*EGTKPQELGAPEAA Trigger: AGCAGCCTCTGGGGCACCCAGCTCCTGAGGCTTTGTCCCTTCCCAATAAAGCCTGCTACCTGGCAGTACCCCTGAAGAGATCTGCGTCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000316939.3 |
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| CDS-3UTR CAA 90 bp | TTGAGAGGACGCAGATCTCTTCAGGGGTACTGCCAGGTAGCAGGCTTTATTGGGGGAAGCGGGCACTCCTaGGGTCCACCTGGTAGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: LRGRRSLQGYCQVAGFIGGSGHS*GPPGSP Trigger: TGGGCTACCAGGTGGACCCAAGGAGTGCCCGCTTCC...CCCAATAAAGCCTGCTACCTGGCAGTACCCCTGAAGAGATCTGCGTCCTCTCAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000316939.3 |
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| CDS GCA 90 bp | GCTGCTGCTGCTGCCAGTTCACAATCATCTGTGGCATCTTGGCCATaGACTCTGCGATGTGCTGCTCCCTCTCCCGACGCTTCTGCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: AAAAASSQSSVASWP*TLRCAAPSPDASAL Trigger: AAGAGCAGAAGCGTCGGGAGAGGGAGCAGCACATCGCAGAGTGCATGGCCAAGATGCCACAGATGATTGTGAACTGGCAGCAGCAGCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316939.3 |
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| CDS GCA 90 bp | CTCTCCTTGTCAGCCTGGGCCTTCTCCCAGTTCTCCCGCTGCTGCTaGTGCCAGTTCACAATCATCTGTGGCATCTTGGCCATGCACTCT | + |
|
Preference number: 5 (lower is better) Translates to: LSLSAWAFSQFSRCC*CQFTIICGILAMHS Trigger: AGAGTGCATGGCCAAGATGCCACAGATGATTGTGAACTGGCAGCAGCAGCAGCGGGAGAACTGGGAGAAGGCCCAGGCTGACAAGGAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316939.3 |
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| CDS GCA 90 bp | CCAGAGAGGCACACCTTGAGAGGACGCAGATCTCTTCAGGGGTACTaGCAGGTAGCAGGCTTTATTGGGAAGGGACAAAGCCTCAGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: PERHTLRGRRSLQGY*QVAGFIGKGQSLRS Trigger: GCTCCTGAGGCTTTGTCCCTTCCCAATAAAGCCTGCTACCTGGCAGTACCCCTGAAGAGATCTGCGTCCTCTCAAGGTGTGCCTCTCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316939.3 |
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| CDS-3UTR CAA 90 bp | CCATCCTCTTCTAGGATGAGGGGAAGCTGGAGCCCCAACTTTGATCCTCCATTGAGTCCCTGTCCCCTTTaGAGTACAGCCAAGTGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: PSSSRMRGSWSPNFDPPLSPCPL*STAKWG Trigger: CCCCCACTTGGCTGTACTCAAAAGGGGACAGGGACT...CAATGGAGGATCAAAGTTGGGGCTCCAGCTTCCCCTCATCCTAGAAGAGGATGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000316939.3 |
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| CDS-3UTR CAA 90 bp | AGGGGAAGCTGGAGCCCCAACTTTGATCCTCCATTGGAGTGGCCCAAATCTTTCGTGAGTCCCTGCAGATaGAGGCTTCCGGTGTCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: RGSWSPNFDPPLEWPKSFVSPCR*RLPVSP Trigger: AGGAGACACCGGAAGCCTCAATCTGCAGGGACTCAC...GAAAGATTTGGGCCACTCCAATGGAGGATCAAAGTTGGGGCTCCAGCTTCCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000316939.3 |
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| CDS-3UTR CAA 90 bp | GACGGAAAGGCGGCTGCTTGCCTCTCCATCCTCCGAAAAACCCCTGAGGACCCCAACTTTGATCCTCCATaGGAGTGGCCCAAATCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: DGKAAACLSILRKTPEDPNFDPP*EWPKSF Trigger: GAAAGATTTGGGCCACTCCAATGGAGGATCAAAGTT...GGGGTCCTCAGGGGTTTTTCGGAGGATGGAGAGGCAAGCAGCCGCCTTTCCGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000316939.3 |
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| CDS-3UTR CAA 90 bp | CCATCCTCTTCTAGGATGAGGGGAAGCTGGAGCCCCAACTTTGATCCTCCATTGGCTGGAGCCCCAACTTaGATCCTCCATTGGAGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: PSSSRMRGSWSPNFDPPLAGAPT*ILHWSG Trigger: GCCACTCCAATGGAGGATCAAAGTTGGGGCTCCAGC...CAATGGAGGATCAAAGTTGGGGCTCCAGCTTCCCCTCATCCTAGAAGAGGATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000316939.3 |
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| CDS-3UTR CAA 90 bp | GAAGCTGGAGCCCCAACTTTGATCCTCCATTGGAGTGGCCCAAATCTTTCCATCCGGAAAGGCGGCTGCTaGCCTCTCCATCCTCCGAAA | + |
|
Preference number: 5 (lower is better) Translates to: EAGAPTLILHWSGPNLSIRKGGC*PLHPPK Trigger: TTTCGGAGGATGGAGAGGCAAGCAGCCGCCTTTCCG...GATGGAAAGATTTGGGCCACTCCAATGGAGGATCAAAGTTGGGGCTCCAGCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316939.3 |
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| CDS-3UTR CAA 90 bp | AAGCAAACAGTCCAGCTTCCTGTCCTCCTAAAGTGGCCCCTGTTCCCATCTCCCATCATCTGTGGCATCTaGGCCATGCACTCTGCGATG | + |
|
Preference number: 5 (lower is better) Translates to: KQTVQLPVLLKWPLFPSPIICGI*AMHSAM Trigger: CATCGCAGAGTGCATGGCCAAGATGCCACAGATGAT...GGGAGATGGGAACAGGGGCCACTTTAGGAGGACAGGAAGCTGGACTGTTTGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316939.3 |
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| CDS-3UTR CAA 90 bp | CCATTGGAGTGGCCCAAATCTTTCCATCTAGGGCAAGTCCTGAAAGGCCCAAGGCCAGAGAGGCACACCTaGAGAGGACGCAGATCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: PLEWPKSFHLGQVLKGPRPERHT*RGRRSL Trigger: AAGAGATCTGCGTCCTCTCAAGGTGTGCCTCTCTGG...CCTTGGGCCTTTCAGGACTTGCCCTAGATGGAAAGATTTGGGCCACTCCAATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316939.3 |
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| CDS-3UTR CAA 90 bp | TTGAGAGGACGCAGATCTCTTCAGGGGTACTGCCAGGTAGCAGGCTTTATTGGGTTCTGTTTTTCCTCCTaGAGGCGCTTGCGCTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LRGRRSLQGYCQVAGFIGFCFSS*RRLRSF Trigger: GAAGGAGCGCAAGCGCCTCAAGGAGGAAAAACAGAA...CCCAATAAAGCCTGCTACCTGGCAGTACCCCTGAAGAGATCTGCGTCCTCTCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000316939.3 |
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| CDS GCA 72 bp | AACCCGGGGCCAGGGTCGCCGCCACACCTAGTAGGCTaGGTGCCTGTCGCACGGACGCCGCCATCTTGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: NPGPGSPPHLVG*VPVARTPPSWL Trigger: CAGCCAAGATGGCGGCGTCCGTGCGACAGGCACGCAGCCTACTAGGTGTGGCGGCGACCCTGGCCCCGGGTT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316939.3 |
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| CDS GCA 72 bp | TACCATTCGCGTTCTTCGGCCTCCAGCTCCCGCAGCTaGTCCGGCGACGGCCATAACGAACCGGGGACCACC | + |
|
Preference number: 6 (lower is better) Translates to: YHSRSSASSSRS*SGDGHNEPGTT Trigger: GGTGGTCCCCGGTTCGTTATGGCCGTCGCCGGAGCAGCTGCGGGAGCTGGAGGCCGAAGAACGCGAATGGTA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316939.3 |
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| CDS GCA 72 bp | TGCTCCCTCTCCCGACGCTTCTGCTCTTCGGCCAGCTaGTTCACCCGCAGCGACTCCTGCATGGTCGCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: CSLSRRFCSSAS*FTRSDSCMVAR Trigger: CCTGGCGACCATGCAGGAGTCGCTGCGGGTGAAGCAGCTGGCCGAAGAGCAGAAGCGTCGGGAGAGGGAGCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316939.3 |
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| CDS GCA 72 bp | CACTCTGCGATGTGCTGCTCCCTCTCCCGACGCTTCTaGTCTTCGGCCAGCTGCTTCACCCGCAGCGACTCC | + |
|
Preference number: 6 (lower is better) Translates to: HSAMCCSLSRRF*SSASCFTRSDS Trigger: GGAGTCGCTGCGGGTGAAGCAGCTGGCCGAAGAGCAGAAGCGTCGGGAGAGGGAGCAGCACATCGCAGAGTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316939.3 |
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| CDS CCA 72 bp | CTTCGGCCAGCTGCTTCACCCGCAGCGACTCCTGCATaGTCGCCAGGCTCGGGTACCATTCGCGTTCTTCGG | + |
|
Preference number: 6 (lower is better) Translates to: LRPAASPAATPA*SPGSGTIRVLR Trigger: CCGAAGAACGCGAATGGTACCCGAGCCTGGCGACCATGCAGGAGTCGCTGCGGGTGAAGCAGCTGGCCGAAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316939.3 |
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| CDS GCA 72 bp | TGCTCTTCGGCCAGCTGCTTCACCCGCAGCGACTCCTaGATGGTCGCCAGGCTCGGGTACCATTCGCGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: CSSASCFTRSDS*MVARLGYHSRS Trigger: AGAACGCGAATGGTACCCGAGCCTGGCGACCATGCAGGAGTCGCTGCGGGTGAAGCAGCTGGCCGAAGAGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316939.3 |
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| CDS CCA 72 bp | TCCTTGAGGCGCTTGCGCTCCTTCTTCTCTAGGTCCTaGAGCAGCTCCTGGAAGCGGGCACTCCTTGGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: SLRRLRSFFSRS*SSSWKRALLGS Trigger: GGACCCAAGGAGTGCCCGCTTCCAGGAGCTGCTCCAGGACCTAGAGAAGAAGGAGCGCAAGCGCCTCAAGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316939.3 |
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| CDS CAA 90 bp | TTCTCCCGCTGCTGCTGCTGCCAGTTCACAATCATCTGTGGCATCTaGGCCATGCACTCTGCGATGTGCTGCTCCCTCTCCCGACGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: FSRCCCCQFTIICGI*AMHSAMCCSLSRRF Trigger: GAAGCGTCGGGAGAGGGAGCAGCACATCGCAGAGTGCATGGCCAAGATGCCACAGATGATTGTGAACTGGCAGCAGCAGCAGCGGGAGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316939.3 |
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| CDS GCA 72 bp | GCTGCCAGTTCACAATCATCTGTGGCATCTTGGCCATaGACTCTGCGATGTGCTGCTCCCTCTCCCGACGCT | + |
|
Preference number: 6 (lower is better) Translates to: AASSQSSVASWP*TLRCAAPSPDA Trigger: AGCGTCGGGAGAGGGAGCAGCACATCGCAGAGTGCATGGCCAAGATGCCACAGATGATTGTGAACTGGCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316939.3 |
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| CDS GCA 72 bp | TCCTTGTCAGCCTGGGCCTTCTCCCAGTTCTCCCGCTaGTGCTGCTGCCAGTTCACAATCATCTGTGGCATC | + |
|
Preference number: 6 (lower is better) Translates to: SLSAWAFSQFSR*CCCQFTIICGI Trigger: GATGCCACAGATGATTGTGAACTGGCAGCAGCAGCAGCGGGAGAACTGGGAGAAGGCCCAGGCTGACAAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316939.3 |
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| CDS CCA 72 bp | GCTGCTGCTGCCAGTTCACAATCATCTGTGGCATCTTaGCCATGCACTCTGCGATGTGCTGCTCCCTCTCCC | + |
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Preference number: 6 (lower is better) Translates to: AAAASSQSSVAS*PCTLRCAAPSP Trigger: GGGAGAGGGAGCAGCACATCGCAGAGTGCATGGCCAAGATGCCACAGATGATTGTGAACTGGCAGCAGCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316939.3 |
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| CDS CCA 72 bp | CTCCCGCTGCTGCTGCTGCCAGTTCACAATCATCTGTaGCATCTTGGCCATGCACTCTGCGATGTGCTGCTC | + |
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Preference number: 6 (lower is better) Translates to: LPLLLLPVHNHL*HLGHALCDVLL Trigger: GAGCAGCACATCGCAGAGTGCATGGCCAAGATGCCACAGATGATTGTGAACTGGCAGCAGCAGCAGCGGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316939.3 |
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| CDS CAA 90 bp | AATGCAGCAGCTCGCGCCTCCTTCTTCCGTTTCTGTTTTTCCTCCTaGAGGCGCTTGCGCTCCTTCTTCTCTAGGTCCTGGAGCAGCTCC | + |
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Preference number: 6 (lower is better) Translates to: NAAARASFFRFCFSS*RRLRSFFSRSWSSS Trigger: GGAGCTGCTCCAGGACCTAGAGAAGAAGGAGCGCAAGCGCCTCAAGGAGGAAAAACAGAAACGGAAGAAGGAGGCGCGAGCTGCTGCATT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316939.3 |
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| CDS GCA 72 bp | GTTCACAATCATCTGTGGCATCTTGGCCATGCACTCTaGGATGTGCTGCTCCCTCTCCCGACGCTTCTGCTC | + |
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Preference number: 6 (lower is better) Translates to: VHNHLWHLGHAL*DVLLPLPTLLL Trigger: GAGCAGAAGCGTCGGGAGAGGGAGCAGCACATCGCAGAGTGCATGGCCAAGATGCCACAGATGATTGTGAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316939.3 |
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| CDS GCA 72 bp | TTGTCAGCCTGGGCCTTCTCCCAGTTCTCCCGCTGCTaGTGCTGCCAGTTCACAATCATCTGTGGCATCTTG | + |
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Preference number: 6 (lower is better) Translates to: LSAWAFSQFSRC*CCQFTIICGIL Trigger: CAAGATGCCACAGATGATTGTGAACTGGCAGCAGCAGCAGCGGGAGAACTGGGAGAAGGCCCAGGCTGACAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316939.3 |
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| CDS CCA 72 bp | ATCTCTTCAGGGGTACTGCCAGGTAGCAGGCTTTATTaGGAAGGGACAAAGCCTCAGGAGCTGGGTGCCCCA | + |
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Preference number: 6 (lower is better) Translates to: ISSGVLPGSRLY*EGTKPQELGAP Trigger: TGGGGCACCCAGCTCCTGAGGCTTTGTCCCTTCCCAATAAAGCCTGCTACCTGGCAGTACCCCTGAAGAGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000316939.3 |
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| CDS CAA 72 bp | TGCTGCTGCTGCCAGTTCACAATCATCTGTGGCATCTaGGCCATGCACTCTGCGATGTGCTGCTCCCTCTCC | + |
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Preference number: 6 (lower is better) Translates to: CCCCQFTIICGI*AMHSAMCCSLS Trigger: GGAGAGGGAGCAGCACATCGCAGAGTGCATGGCCAAGATGCCACAGATGATTGTGAACTGGCAGCAGCAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316939.3 |
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