Pregenerated sensors for GADD45A (Homo sapiens)
Ensembl gene IDs: ENSG00000116717Ensembl transcript IDs: ENST00000370985.4, ENST00000370986.9, ENST00000460575.1, ENST00000484245.1, ENST00000617962.2, ENST00000648742.1, ENST00000650283.1
Found 40 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | ATTAATCACTGGAACCCATTGATCCATGTAGCGACTTTCCCGGCAAAAACAAATCCCTCCCGCCTTGCTTaGTCGCTCGCTCCCCGGACC | + |
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Preference number: 4 (lower is better) Translates to: INHWNPLIHVATFPAKTNPSRLA*SLAPRT Trigger: GGTCCGGGGAGCGAGCGAGCAAGCAAGGCGGGAGGG...ATTTGTTTTTGCCGGGAAAGTCGCTACATGGATCAATGGGTTCCAGTGATTAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000648742.1 ENST00000650283.1 |
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| CDS-3UTR GCA 90 bp | ATTAATCACTGGAACCCATTGATCCATGTAGCGACTTTCCCGGCAAAAACAAATCGGGCGCCTGCTTTCTaGACTCACTCACAGGCGCCG | + |
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Preference number: 4 (lower is better) Translates to: INHWNPLIHVATFPAKTNRAPAF*THSQAP Trigger: CGGCGCCTGTGAGTGAGTGCAGAAAGCAGGCGCCCG...ATTTGTTTTTGCCGGGAAAGTCGCTACATGGATCAATGGGTTCCAGTGATTAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000648742.1 ENST00000650283.1 |
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| CDS-3UTR TCA 90 bp | ATTAATCACTGGAACCCATTGATCCATGTAGCGACTTTCCCGGCAAAAACAAATCGTACACCCCGACAGTaGTCGTGCGCTGACTCAGGG | + |
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Preference number: 4 (lower is better) Translates to: INHWNPLIHVATFPAKTNRTPRQ*SCADSG Trigger: CCCTGAGTCAGCGCACGATCACTGTCGGGGTGTACG...ATTTGTTTTTGCCGGGAAAGTCGCTACATGGATCAATGGGTTCCAGTGATTAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000650283.1 |
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| CDS-3UTR CCA 90 bp | ATTAATCACTGGAACCCATTGATCCATGTAGCGACTTTCCCGGCAAAAACAAATCCGCACGACACTAATTaGGCCGCTGCCTCCCAGCCA | + |
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Preference number: 4 (lower is better) Translates to: INHWNPLIHVATFPAKTNPHDTN*AAASQP Trigger: TGGCTGGGAGGCAGCGGCCCAATTAGTGTCGTGCGG...ATTTGTTTTTGCCGGGAAAGTCGCTACATGGATCAATGGGTTCCAGTGATTAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000648742.1 ENST00000650283.1 |
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| CDS-3UTR TCA 90 bp | ATTAATCACTGGAACCCATTGATCCATGTAGCGACTTTCCCGGCAAAAACAAATACAGTGATCGTGCGCTaGCTCAGGGCTTTGCTGAGC | + |
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Preference number: 4 (lower is better) Translates to: INHWNPLIHVATFPAKTNTVIVR*LRALLS Trigger: GCTCAGCAAAGCCCTGAGTCAGCGCACGATCACTGT...ATTTGTTTTTGCCGGGAAAGTCGCTACATGGATCAATGGGTTCCAGTGATTAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000650283.1 |
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| CDS-3UTR TCA 90 bp | ATTAATCACTGGAACCCATTGATCCATGTAGCGACTTTCCCGGCAAAAACAAATCCCAGAACATGTAGTTaGACTCACTCAGCCCCTTGG | + |
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Preference number: 4 (lower is better) Translates to: INHWNPLIHVATFPAKTNPRTCS*THSAPW Trigger: CCAAGGGGCTGAGTGAGTTCAACTACATGTTCTGGG...ATTTGTTTTTGCCGGGAAAGTCGCTACATGGATCAATGGGTTCCAGTGATTAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000648742.1 ENST00000650283.1 |
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| CDS-3UTR TCA 90 bp | ATTAATCACTGGAACCCATTGATCCATGTAGCGACTTTCCCGGCAAAAACAAATGAATGTGGATTACGTTaGGCAGCTTGGCCGCTTCGT | + |
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Preference number: 4 (lower is better) Translates to: INHWNPLIHVATFPAKTNECGLR*AAWPLR Trigger: ACGAAGCGGCCAAGCTGCTCAACGTAATCCACATTC...ATTTGTTTTTGCCGGGAAAGTCGCTACATGGATCAATGGGTTCCAGTGATTAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000650283.1 |
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| CDS-3UTR GCA 90 bp | ATTAATCACTGGAACCCATTGATCCATGTAGCGACTTTCCCGGCAAAAACAAATAGTCATATTGCAAACTaGAGGTCGCCCAGGGAGAGA | + |
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Preference number: 4 (lower is better) Translates to: INHWNPLIHVATFPAKTNSHIAN*RSPRER Trigger: TCTCTCCCTGGGCGACCTGCAGTTTGCAATATGACT...ATTTGTTTTTGCCGGGAAAGTCGCTACATGGATCAATGGGTTCCAGTGATTAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000648742.1 ENST00000650283.1 |
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| CDS-3UTR GCA 90 bp | ATTAATCACTGGAACCCATTGATCCATGTAGCGACTTTCCCGGCAAAAACAAATATCCTTTCGGTCTTCTaGTCTCCAGCCGAGAATTCC | + |
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Preference number: 4 (lower is better) Translates to: INHWNPLIHVATFPAKTNILSVF*SPAENS Trigger: GGAATTCTCGGCTGGAGAGCAGAAGACCGAAAGGAT...ATTTGTTTTTGCCGGGAAAGTCGCTACATGGATCAATGGGTTCCAGTGATTAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000650283.1 |
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| CDS-3UTR GCA 90 bp | ATTAATCACTGGAACCCATTGATCCATGTAGCGACTTTCCCGGCAAAAACAAATATTCTTTCGGTCTTCTaGTCTCCAGCCGAGAATTCC | + |
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Preference number: 4 (lower is better) Translates to: INHWNPLIHVATFPAKTNILSVF*SPAENS Trigger: GGAATTCTCGGCTGGAGAGCAGAAGACCGAAAGAAT...ATTTGTTTTTGCCGGGAAAGTCGCTACATGGATCAATGGGTTCCAGTGATTAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000648742.1 |
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| CDS-3UTR TCA 90 bp | ATTAATCACTGGAACCCATTGATCCATGTAGCGACTTTCCCGGCAAAAACAAATGCAGGATCCTTCCATTaGGATGAATGTGGATTACGT | + |
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Preference number: 4 (lower is better) Translates to: INHWNPLIHVATFPAKTNAGSFH*DECGLR Trigger: ACGTAATCCACATTCATCTCAATGGAAGGATCCTGC...ATTTGTTTTTGCCGGGAAAGTCGCTACATGGATCAATGGGTTCCAGTGATTAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000650283.1 |
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| CDS-3UTR GCA 90 bp | ATTAATCACTGGAACCCATTGATCCATGTAGCGACTTTCCCGGCAAAAACAAATTCACCTCTTTCCATCTaGAAAGTCATCTATCTCCGG | + |
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Preference number: 4 (lower is better) Translates to: INHWNPLIHVATFPAKTNSPLSI*KVIYLR Trigger: CCGGAGATAGATGACTTTGCAGATGGAAAGAGGTGA...ATTTGTTTTTGCCGGGAAAGTCGCTACATGGATCAATGGGTTCCAGTGATTAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000648742.1 ENST00000650283.1 |
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| CDS-3UTR TCA 90 bp | ATTAATCACTGGAACCCATTGATCCATGTAGCGACTTTCCCGGCAAAAACAAATATCCTTCCATTGAGATaGATGTGGATTACGTTGAGC | + |
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Preference number: 4 (lower is better) Translates to: INHWNPLIHVATFPAKTNILPLR*MWITLS Trigger: GCTCAACGTAATCCACATTCATCTCAATGGAAGGAT...ATTTGTTTTTGCCGGGAAAGTCGCTACATGGATCAATGGGTTCCAGTGATTAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000650283.1 |
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| CDS-3UTR TCA 90 bp | ATTAATCACTGGAACCCATTGATCCATGTAGCGACTTTCCCGGCAAAAACAAATATCCTTCCATTGAGATaGATGTGGATTCTTTCGGTC | + |
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Preference number: 4 (lower is better) Translates to: INHWNPLIHVATFPAKTNILPLR*MWILSV Trigger: GACCGAAAGAATCCACATTCATCTCAATGGAAGGAT...ATTTGTTTTTGCCGGGAAAGTCGCTACATGGATCAATGGGTTCCAGTGATTAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000648742.1 |
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| CDS-3UTR TCA 90 bp | ATTAATCACTGGAACCCATTGATCCATGTAGCGACTTTCCCGGCAAAAACAAATGCAGGATCCTTCCATTaGGATGAATGTGGATTCTTT | + |
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Preference number: 4 (lower is better) Translates to: INHWNPLIHVATFPAKTNAGSFH*DECGFF Trigger: AAAGAATCCACATTCATCTCAATGGAAGGATCCTGC...ATTTGTTTTTGCCGGGAAAGTCGCTACATGGATCAATGGGTTCCAGTGATTAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000648742.1 |
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| CDS GCA 90 bp | GTGCGGGCTGCTCCTGCCACGGCTAGCGCGCGGGCGCCTGCTTTCTaGACTCACTCACAGGCGCCGCTCCGGCAGCTCAGGCCCTGGCGC | + |
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Preference number: 5 (lower is better) Translates to: VRAAPATASARAPAF*THSQAPLRQLRPWR Trigger: GCGCCAGGGCCTGAGCTGCCGGAGCGGCGCCTGTGAGTGAGTGCAGAAAGCAGGCGCCCGCGCGCTAGCCGTGGCAGGAGCAGCCCGCAC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000370985.4 ENST00000370986.9 ENST00000460575.1 ENST00000648742.1 ENST00000650283.1 |
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| CDS GCA 90 bp | CCACAGGCTGCCAGCCACGGGAGCCGCACGGGCAGCGACGGCCACTaGTGCCCTTTGCAAAGGCCCCGGCGGGGCTCGTTCGGGTTGGGG | + |
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Preference number: 5 (lower is better) Translates to: PQAASHGSRTGSDGH*CPLQRPRRGSFGLG Trigger: CCCCAACCCGAACGAGCCCCGCCGGGGCCTTTGCAAAGGGCAGCAGTGGCCGTCGCTGCCCGTGCGGCTCCCGTGGCTGGCAGCCTGTGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000484245.1 |
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| CDS GCA 90 bp | ACCGGGCGTCCCGTGAGAAGTCCCGAGAGTGCCCCTGCCACAGGCTaGCAGCCACGGGAGCCGCACGGGCAGCGACGGCCACTGCTGCCC | + |
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Preference number: 5 (lower is better) Translates to: TGRPVRSPESAPATG*QPREPHGQRRPLLP Trigger: GGGCAGCAGTGGCCGTCGCTGCCCGTGCGGCTCCCGTGGCTGGCAGCCTGTGGCAGGGGCACTCTCGGGACTTCTCACGGGACGCCCGGT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484245.1 |
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| CDS GCA 90 bp | ACGCCCAAGGACCGGGCGTCCCGTGAGAAGTCCCGAGAGTGCCCCTaGCACAGGCTGCCAGCCACGGGAGCCGCACGGGCAGCGACGGCC | + |
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Preference number: 5 (lower is better) Translates to: TPKDRASREKSRECP*HRLPATGAARAATA Trigger: GGCCGTCGCTGCCCGTGCGGCTCCCGTGGCTGGCAGCCTGTGGCAGGGGCACTCTCGGGACTTCTCACGGGACGCCCGGTCCTTGGGCGT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484245.1 |
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| CDS GCA 90 bp | CCCTGCACGCCCAAGGACCGGGCGTCCCGTGAGAAGTCCCGAGAGTaGCCCTGCCACAGGCTGCCAGCCACGGGAGCCGCACGGGCAGCG | + |
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Preference number: 5 (lower is better) Translates to: PCTPKDRASREKSRE*PCHRLPATGAARAA Trigger: CGCTGCCCGTGCGGCTCCCGTGGCTGGCAGCCTGTGGCAGGGGCACTCTCGGGACTTCTCACGGGACGCCCGGTCCTTGGGCGTGCAGGG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484245.1 |
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| CDS GCA 90 bp | AAGTCATATTGCAAACTGCAGGTCGCCCAGGGAGAGAGCGCGGCGTaGGGGCTGCTCCTGCCACGGCTAGCGCGCGGGCGCCTGCTTTCT | + |
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Preference number: 5 (lower is better) Translates to: KSYCKLQVAQGESAA*GLLLPRLARGRLLS Trigger: AGAAAGCAGGCGCCCGCGCGCTAGCCGTGGCAGGAGCAGCCCGCACGCCGCGCTCTCTCCCTGGGCGACCTGCAGTTTGCAATATGACTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000370985.4 ENST00000370986.9 ENST00000460575.1 ENST00000617962.2 ENST00000648742.1 ENST00000650283.1 |
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| CDS GCA 90 bp | CTTCTGCTCTCCAGCCGAGAATTCCTCCAAAGTCATATTGCAAACTaGAGGTCGCCCAGGGAGAGAGCGCGGCGTGCGGGCTGCTCCTGC | + |
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Preference number: 5 (lower is better) Translates to: LLLSSREFLQSHIAN*RSPRERARRAGCSC Trigger: GCAGGAGCAGCCCGCACGCCGCGCTCTCTCCCTGGGCGACCTGCAGTTTGCAATATGACTTTGGAGGAATTCTCGGCTGGAGAGCAGAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000370985.4 ENST00000370986.9 ENST00000460575.1 ENST00000617962.2 ENST00000648742.1 ENST00000650283.1 |
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| CDS GCA 90 bp | TTTCGGTCTTCTGCTCTCCAGCCGAGAATTCCTCCAAAGTCATATTaGAAACTGCAGGTCGCCCAGGGAGAGAGCGCGGCGTGCGGGCTG | + |
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Preference number: 5 (lower is better) Translates to: FRSSALQPRIPPKSY*KLQVAQGESAACGL Trigger: CAGCCCGCACGCCGCGCTCTCTCCCTGGGCGACCTGCAGTTTGCAATATGACTTTGGAGGAATTCTCGGCTGGAGAGCAGAAGACCGAAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000370985.4 ENST00000370986.9 ENST00000460575.1 ENST00000617962.2 ENST00000648742.1 ENST00000650283.1 |
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| CDS-3UTR CAA 90 bp | ATTAATCACTGGAACCCATTGATCCATGTAGCGACTTTCCCGGCAAAAACAAATATTACGTTGAGCAGCTaGGCCGCTTCGTACACCCCG | + |
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Preference number: 5 (lower is better) Translates to: INHWNPLIHVATFPAKTNITLSS*AASYTP Trigger: CGGGGTGTACGAAGCGGCCAAGCTGCTCAACGTAAT...ATTTGTTTTTGCCGGGAAAGTCGCTACATGGATCAATGGGTTCCAGTGATTAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000650283.1 |
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| CDS-3UTR CAA 90 bp | ATTAATCACTGGAACCCATTGATCCATGTAGCGACTTTCCCGGCAAAAACAAATTCCTCCAAAGTCATATaGCAAACTGCAGGTCGCCCA | + |
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Preference number: 5 (lower is better) Translates to: INHWNPLIHVATFPAKTNSSKVI*QTAGRP Trigger: TGGGCGACCTGCAGTTTGCAATATGACTTTGGAGGA...ATTTGTTTTTGCCGGGAAAGTCGCTACATGGATCAATGGGTTCCAGTGATTAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000648742.1 ENST00000650283.1 |
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| CDS-3UTR CAA 90 bp | ATTAATCACTGGAACCCATTGATCCATGTAGCGACTTTCCCGGCAAAAACAAATAATCACTGGAACCCATaGATCCATGTAGCGACTTTC | + |
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Preference number: 5 (lower is better) Translates to: INHWNPLIHVATFPAKTNNHWNP*IHVATF Trigger: GAAAGTCGCTACATGGATCAATGGGTTCCAGTGATT...ATTTGTTTTTGCCGGGAAAGTCGCTACATGGATCAATGGGTTCCAGTGATTAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000648742.1 ENST00000650283.1 |
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| CDS GCA 72 bp | GCCAGTGAGCGCAGAAGCGCGGGCGCCCTCAACCACTaGCCGGGTCCCTGGGGGTCGCCGCCCGGCCCGCTC | + |
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Preference number: 6 (lower is better) Translates to: ASERRSAGALNH*PGPWGSPPGPL Trigger: GAGCGGGCCGGGCGGCGACCCCCAGGGACCCGGGCAGTGGTTGAGGGCGCCCGCGCTTCTGCGCTCACTGGC 79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000460575.1 |
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| CDS GCA 72 bp | AGCCACGGGAGCCGCACGGGCAGCGACGGCCACTGCTaGCCTTTGCAAAGGCCCCGGCGGGGCTCGTTCGGG | + |
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Preference number: 6 (lower is better) Translates to: SHGSRTGSDGHC*PLQRPRRGSFG Trigger: CCCGAACGAGCCCCGCCGGGGCCTTTGCAAAGGGCAGCAGTGGCCGTCGCTGCCCGTGCGGCTCCCGTGGCT 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000484245.1 |
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| CDS GCA 72 bp | GCCAGCCACGGGAGCCGCACGGGCAGCGACGGCCACTaGTGCCCTTTGCAAAGGCCCCGGCGGGGCTCGTTC | + |
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Preference number: 6 (lower is better) Translates to: ASHGSRTGSDGH*CPLQRPRRGSF Trigger: GAACGAGCCCCGCCGGGGCCTTTGCAAAGGGCAGCAGTGGCCGTCGCTGCCCGTGCGGCTCCCGTGGCTGGC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000484245.1 |
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| CDS CAA 72 bp | GGGAGCCGCACGGGCAGCGACGGCCACTGCTGCCCTTaGCAAAGGCCCCGGCGGGGCTCGTTCGGGTTGGGG | + |
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Preference number: 6 (lower is better) Translates to: GSRTGSDGHCCP*QRPRRGSFGLG Trigger: CCCCAACCCGAACGAGCCCCGCCGGGGCCTTTGCAAAGGGCAGCAGTGGCCGTCGCTGCCCGTGCGGCTCCC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000484245.1 |
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| CDS GCA 72 bp | CCCGTGAGAAGTCCCGAGAGTGCCCCTGCCACAGGCTaGCAGCCACGGGAGCCGCACGGGCAGCGACGGCCA | + |
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Preference number: 6 (lower is better) Translates to: PVRSPESAPATG*QPREPHGQRRP Trigger: TGGCCGTCGCTGCCCGTGCGGCTCCCGTGGCTGGCAGCCTGTGGCAGGGGCACTCTCGGGACTTCTCACGGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484245.1 |
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| CDS GCA 72 bp | GACCGGGCGTCCCGTGAGAAGTCCCGAGAGTGCCCCTaGCACAGGCTGCCAGCCACGGGAGCCGCACGGGCA | + |
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Preference number: 6 (lower is better) Translates to: DRASREKSRECP*HRLPATGAARA Trigger: TGCCCGTGCGGCTCCCGTGGCTGGCAGCCTGTGGCAGGGGCACTCTCGGGACTTCTCACGGGACGCCCGGTC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484245.1 |
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| CDS GCA 72 bp | GCTCCTGCCACGGCTAGCGCGCGGGCGCCTGCTTTCTaGACTCACTCACAGGCGCCGCTCCGGCAGCTCAGG | + |
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Preference number: 6 (lower is better) Translates to: APATASARAPAF*THSQAPLRQLR Trigger: CCTGAGCTGCCGGAGCGGCGCCTGTGAGTGAGTGCAGAAAGCAGGCGCCCGCGCGCTAGCCGTGGCAGGAGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000370985.4 ENST00000370986.9 ENST00000460575.1 ENST00000648742.1 ENST00000650283.1 |
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| CDS GCA 72 bp | CCCAAGGACCGGGCGTCCCGTGAGAAGTCCCGAGAGTaGCCCTGCCACAGGCTGCCAGCCACGGGAGCCGCA | + |
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Preference number: 6 (lower is better) Translates to: PKDRASREKSRE*PCHRLPATGAA Trigger: TGCGGCTCCCGTGGCTGGCAGCCTGTGGCAGGGGCACTCTCGGGACTTCTCACGGGACGCCCGGTCCTTGGG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484245.1 |
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| CDS GCA 72 bp | TCCAGCCGAGAATTCCTCCAAAGTCATATTGCAAACTaGAGGTCGCCCAGGGAGAGAGCGCGGCGTGCGGGC | + |
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Preference number: 6 (lower is better) Translates to: SSREFLQSHIAN*RSPRERARRAG Trigger: GCCCGCACGCCGCGCTCTCTCCCTGGGCGACCTGCAGTTTGCAATATGACTTTGGAGGAATTCTCGGCTGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000370985.4 ENST00000370986.9 ENST00000460575.1 ENST00000617962.2 ENST00000648742.1 ENST00000650283.1 |
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| CDS CAA 72 bp | CACAACACCACGTTATCGGGGTCGACGTTGAGCAGCTaGGCCGCTTCGTACACCCCGACAGTGATCGTGCGC | + |
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Preference number: 6 (lower is better) Translates to: HNTTLSGSTLSS*AASYTPTVIVR Trigger: GCGCACGATCACTGTCGGGGTGTACGAAGCGGCCAAGCTGCTCAACGTCGACCCCGATAACGTGGTGTTGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000370986.9 ENST00000484245.1 |
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| CDS CAA 90 bp | CTTTCGGTCTTCTGCTCTCCAGCCGAGAATTCCTCCAAAGTCATATaGCAAACTGCAGGTCGCCCAGGGAGAGAGCGCGGCGTGCGGGCT | + |
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Preference number: 6 (lower is better) Translates to: LSVFCSPAENSSKVI*QTAGRPGRERGVRA Trigger: AGCCCGCACGCCGCGCTCTCTCCCTGGGCGACCTGCAGTTTGCAATATGACTTTGGAGGAATTCTCGGCTGGAGAGCAGAAGACCGAAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000370985.4 ENST00000370986.9 ENST00000460575.1 ENST00000617962.2 ENST00000648742.1 ENST00000650283.1 |
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| CDS GCA 72 bp | TCTGCTCTCCAGCCGAGAATTCCTCCAAAGTCATATTaGAAACTGCAGGTCGCCCAGGGAGAGAGCGCGGCG | + |
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Preference number: 6 (lower is better) Translates to: SALQPRIPPKSY*KLQVAQGESAA Trigger: CGCCGCGCTCTCTCCCTGGGCGACCTGCAGTTTGCAATATGACTTTGGAGGAATTCTCGGCTGGAGAGCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000370985.4 ENST00000370986.9 ENST00000460575.1 ENST00000617962.2 ENST00000648742.1 ENST00000650283.1 |
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| CDS CAA 72 bp | AAGTGGATCTGCAGAGCCACATCTACGTTGAGCAGCTaGGCCGCTTCGTACACCCCGACAGTGATCGTGCGC | + |
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Preference number: 6 (lower is better) Translates to: KWICRATSTLSS*AASYTPTVIVR Trigger: GCGCACGATCACTGTCGGGGTGTACGAAGCGGCCAAGCTGCTCAACGTAGATGTGGCTCTGCAGATCCACTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000617962.2 |
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| CDS CAA 72 bp | TTCTGCTCTCCAGCCGAGAATTCCTCCAAAGTCATATaGCAAACTGCAGGTCGCCCAGGGAGAGAGCGCGGC | + |
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Preference number: 6 (lower is better) Translates to: FCSPAENSSKVI*QTAGRPGRERG Trigger: GCCGCGCTCTCTCCCTGGGCGACCTGCAGTTTGCAATATGACTTTGGAGGAATTCTCGGCTGGAGAGCAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000370985.4 ENST00000370986.9 ENST00000460575.1 ENST00000617962.2 ENST00000648742.1 ENST00000650283.1 |
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