RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GAD2 (Homo sapiens)

Ensembl gene IDs: ENSG00000136750

Ensembl transcript IDs: ENST00000259271.7, ENST00000376248.1, ENST00000376261.8, ENST00000428517.2, ENST00000648567.1

Found 389 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGATCTGTAACTCAAAAGATAAAGCATCCTGGAGTACAGCAGGGTTaGTTCACCAGGGCACTGGGCCCCACTGTCTTCTCCACGAAGGAC +
Preference number: 1 (lower is better)
Translates to: GSVTQKIKHPGVQQG*FTRALGPTVFSTKD
Trigger: GTCCTTCGTGGAGAAGACAGTGGGGCCCAGTGCCCTGGTGAACCAACCCTGCTGTACTCCAGGATGCTTTATCTTTTGAGTTACAGATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376261.8
3UTR TCA 90 bp TTCCTTCTTTGGGCTACAGTTGGTAAGGATTTCCCTGCACAGGCCTaGGCAAGGCTCTCAGCCAATTTGAAGGAGTACTGGGAAGGGGTA +
Preference number: 1 (lower is better)
Translates to: FLLWATVGKDFPAQA*ARLSANLKEYWEGV
Trigger: TACCCCTTCCCAGTACTCCTTCAAATTGGCTGAGAGCCTTGCTCAGGCCTGTGCAGGGAAATCCTTACCAACTGTAGCCCAAAGAAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376261.8
3UTR TCA 90 bp ACTCCAGTGACCAGCAGAGCCAACACCTACGATTTTGGCAGCTGGTaGCACTCCATAATTGGTAACGTCTGTTCTCAGAGACAAAGTGGT +
Preference number: 1 (lower is better)
Translates to: TPVTSRANTYDFGSW*HSIIGNVCSQRQSG
Trigger: ACCACTTTGTCTCTGAGAACAGACGTTACCAATTATGGAGTGTCACCAGCTGCCAAAATCGTAGGTGTTGGCTCTGCTGGTCACTGGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
3UTR GCA 90 bp TTCTACCCGTTGAAGGGCAGGGCCTTCTCTCTTCCCTTGTATACCTaGAGTCTGAGTACTGAACTACCTGGTCCATTCAGAAATGGAGAA +
Preference number: 1 (lower is better)
Translates to: FYPLKGRAFSLPLYT*SLSTELPGPFRNGE
Trigger: TTCTCCATTTCTGAATGGACCAGGTAGTTCAGTACTCAGACTGCAGGTATACAAGGGAAGAGAGAAGGCCCTGCCCTTCAACGGGTAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376261.8
3UTR TCA 90 bp GAGGTAAATTTCTCTTTCCTGGACAGTGGCAATATGGCGCCAGGATaGTGTCATTATTGTCCCACAGAGATCTCTTCTCCCAAGGCCAAC +
Preference number: 1 (lower is better)
Translates to: EVNFSFLDSGNMAPG*CHYCPTEISSPKAN
Trigger: GTTGGCCTTGGGAGAAGAGATCTCTGTGGGACAATAATGACATCATCCTGGCGCCATATTGCCACTGTCCAGGAAAGAGAAATTTACCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376261.8
3UTR CCA 90 bp GAAATGCGCAACTGGCCTGGAGGTAAATTTCTCTTTCCTGGACAGTaGCAATATGGCGCCAGGATGATGTCATTATTGTCCCACAGAGAT +
Preference number: 1 (lower is better)
Translates to: EMRNWPGGKFLFPGQ*QYGARMMSLLSHRD
Trigger: ATCTCTGTGGGACAATAATGACATCATCCTGGCGCCATATTGCCACTGTCCAGGAAAGAGAAATTTACCTCCAGGCCAGTTGCGCATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376261.8
3UTR TCA 90 bp GGGCAGGGCCTTCTCTCTTCCCTTGTATACCTGCAGTCTGAGTACTaGACTACCTGGTCCATTCAGAAATGGAGAATGTTCCTAAATTTG +
Preference number: 1 (lower is better)
Translates to: GQGLLSSLVYLQSEY*TTWSIQKWRMFLNL
Trigger: CAAATTTAGGAACATTCTCCATTTCTGAATGGACCAGGTAGTTCAGTACTCAGACTGCAGGTATACAAGGGAAGAGAGAAGGCCCTGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376261.8
3UTR CCA 90 bp ATTGTCCCACAGAGATCTCTTCTCCCAAGGCCAACTTTAATTTTCTaGGCTCACCACATTCTGGGAGTGTGCTTCATTCCTCTTTGCTCA +
Preference number: 1 (lower is better)
Translates to: IVPQRSLLPRPTLIF*AHHILGVCFIPLCS
Trigger: TGAGCAAAGAGGAATGAAGCACACTCCCAGAATGTGGTGAGCCCAGAAAATTAAAGTTGGCCTTGGGAGAAGAGATCTCTGTGGGACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376261.8
3UTR TCA 90 bp CATCCTGCTACTATATTTACACCTGTGCCTTCTTTGTCCATATTCTaGAGAGTAGCAACTACTCCAGTGACCAGCAGAGCCAACACCTAC +
Preference number: 1 (lower is better)
Translates to: HPATIFTPVPSLSIF*RVATTPVTSRANTY
Trigger: GTAGGTGTTGGCTCTGCTGGTCACTGGAGTAGTTGCTACTCTTCAGAATATGGACAAAGAAGGCACAGGTGTAAATATAGTAGCAGGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
3UTR TCA 90 bp CCTCCCTTACTCTCTTCTGACCTGATTCCACATCTCCTTTCAAGATaGTTTATTAAACTACTGGGACCTACTAGGCTTTTATTTGCTTCC +
Preference number: 1 (lower is better)
Translates to: PPLLSSDLIPHLLSR*FIKLLGPTRLLFAS
Trigger: GGAAGCAAATAAAAGCCTAGTAGGTCCCAGTAGTTTAATAAATCATCTTGAAAGGAGATGTGGAATCAGGTCAGAAGAGAGTAAGGGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376261.8
3UTR CCA 90 bp GCATTTGCAGTCTGCATATCAATCTATTGTTCTCCAATCAGCACTTaGAATCTGACGATGTGTGACCCCATAAATATCTATGGAAGCTTT +
Preference number: 1 (lower is better)
Translates to: AFAVCISIYCSPIST*NLTMCDPINIYGSF
Trigger: AAAGCTTCCATAGATATTTATGGGGTCACACATCGTCAGATTCCAAGTGCTGATTGGAGAACAATAGATTGATATGCAGACTGCAAATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376261.8
3UTR TCA 90 bp ATCAATCTATTGTTCTCCAATCAGCACTTGGAATCTGACGATGTGTaGCCCCATAAATATCTATGGAAGCTTTTGTTAGCTCATGTTTTT +
Preference number: 1 (lower is better)
Translates to: INLLFSNQHLESDDV*PHKYLWKLLLAHVF
Trigger: AAAAACATGAGCTAACAAAAGCTTCCATAGATATTTATGGGGTCACACATCGTCAGATTCCAAGTGCTGATTGGAGAACAATAGATTGAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376261.8
3UTR TCA 90 bp ATAGATTTACTTTGGAACAAACTACAAATACATTCACACAGTTTGTaGCAACTTAATTGTCTACCTAGAGAAGTGGAACAGCTTGGTGAG +
Preference number: 1 (lower is better)
Translates to: IDLLWNKLQIHSHSL*QLNCLPREVEQLGE
Trigger: CTCACCAAGCTGTTCCACTTCTCTAGGTAGACAATTAAGTTGTCACAAACTGTGTGAATGTATTTGTAGTTTGTTCCAAAGTAAATCTAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376261.8
3UTR CAA 90 bp ACCAGGGCACTGGGCCCCACTGTCTTCTCCACGAAGGACAGCAGGTaGGATCAATTAGCATCTCTGTCTCTGAAGTGGAACCTTTGGGCC +
Preference number: 2 (lower is better)
Translates to: TRALGPTVFSTKDSR*DQLASLSLKWNLWA
Trigger: GGCCCAAAGGTTCCACTTCAGAGACAGAGATGCTAATTGATCCAACCTGCTGTCCTTCGTGGAGAAGACAGTGGGGCCCAGTGCCCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376261.8
3UTR CAA 90 bp AGGATCTGTAACTCAAAAGATAAAGCATCCTGGAGTACAGCAGGGTaGGTTCACCAGGGCACTGGGCCCCACTGTCTTCTCCACGAAGGA +
Preference number: 2 (lower is better)
Translates to: RICNSKDKASWSTAG*VHQGTGPHCLLHEG
Trigger: TCCTTCGTGGAGAAGACAGTGGGGCCCAGTGCCCTGGTGAACCAACCCTGCTGTACTCCAGGATGCTTTATCTTTTGAGTTACAGATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376261.8
3UTR CAA 90 bp GTAGGGCATTTCTACCCGTTGAAGGGCAGGGCCTTCTCTCTTCCCTaGTATACCTGCAGTCTGAGTACTGAACTACCTGGTCCATTCAGA +
Preference number: 2 (lower is better)
Translates to: VGHFYPLKGRAFSLP*YTCSLSTELPGPFR
Trigger: TCTGAATGGACCAGGTAGTTCAGTACTCAGACTGCAGGTATACAAGGGAAGAGAGAAGGCCCTGCCCTTCAACGGGTAGAAATGCCCTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376261.8
3UTR CAA 90 bp CAGCAGGTTGGATCAATTAGCATCTCTGTCTCTGAAGTGGAACCTTaGGGCCTGAGGCTCCGGATAGTCGGGCAGCTATGTGCTTATTCT +
Preference number: 2 (lower is better)
Translates to: QQVGSISISVSEVEP*GLRLRIVGQLCAYS
Trigger: AGAATAAGCACATAGCTGCCCGACTATCCGGAGCCTCAGGCCCAAAGGTTCCACTTCAGAGACAGAGATGCTAATTGATCCAACCTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376261.8
3UTR CAA 90 bp CTGGGACCTACTAGGCTTTTATTTGCTTCCTTCTTTGGGCTACAGTaGGTAAGGATTTCCCTGCACAGGCCTGAGCAAGGCTCTCAGCCA +
Preference number: 2 (lower is better)
Translates to: LGPTRLLFASFFGLQ*VRISLHRPEQGSQP
Trigger: TGGCTGAGAGCCTTGCTCAGGCCTGTGCAGGGAAATCCTTACCAACTGTAGCCCAAAGAAGGAAGCAAATAAAAGCCTAGTAGGTCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376261.8
3UTR-3UTR TCA 90 bp GGTCCCAGTGGTAGGGAGTCTAGTGGGAGAGACTTTGTGGGGAGGAATGGGGAGTCAGTCCTACTAGTCTaGAGTGAAAATAAAGTTTGC +
Preference number: 2 (lower is better)
Translates to: GPSGRESSGRDFVGRNGESVLLV*SENKVC
Trigger: GCAAACTTTATTTTCACTTCAGACTAGTAGGACTGA...CTCCCCATTCCTCCCCACAAAGTCTCTCCCACTAGACTCCCTACCACTGGGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376261.8
3UTR-3UTR CCA 90 bp ACCTTGCATTTTGTGAAGTCGCACAATTCTCAAAGGAAGTTTCTCAGTAGGGGGGGAATGGGGAGGGGATaGAAATGCGCAACTGGCCTG +
Preference number: 2 (lower is better)
Translates to: TLHFVKSHNSQRKFLSRGGMGRG*KCATGL
Trigger: CAGGCCAGTTGCGCATTTCCATCCCCTCCCCATTCC...CCCCCTACTGAGAAACTTCCTTTGAGAATTGTGCGACTTCACAAAATGCAAGGT
50% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000376261.8
3UTR-3UTR CCA 90 bp AATGCCTCAAAATCTAGGGTGAGAGGCTCATTTCATGGAAGAAAAACAACCACCGTGGGAGAGACTTTGTaGGGAGGAATGGGGAGGGGA +
Preference number: 2 (lower is better)
Translates to: NASKSRVRGSFHGRKTTTVGETL*GGMGRG
Trigger: TCCCCTCCCCATTCCTCCCCACAAAGTCTCTCCCAC...GGTGGTTGTTTTTCTTCCATGAAATGAGCCTCTCACCCTAGATTTTGAGGCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000376261.8
3UTR-3UTR TCA 90 bp TGTGGAGGGCATATAGTTAGGAAAGAGAGAGAGAGAGAGAACAGGAACAGATGCCTGCAGTCTGAGTACTaGACTACCTGGTCCATTCAG +
Preference number: 2 (lower is better)
Translates to: CGGHIVRKERERENRNRCLQSEY*TTWSIQ
Trigger: CTGAATGGACCAGGTAGTTCAGTACTCAGACTGCAG...GCATCTGTTCCTGTTCTCTCTCTCTCTCTCTTTCCTAACTATATGCCCTCCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376261.8
3UTR-3UTR TCA 90 bp CTGAAGAGTAGCAACTACTCCAGTGACCAGCAGAGCCAACACCTACGATTTTGGAAGGTTACTCCTTCATaGAATTCTGCGGGACAGATG +
Preference number: 2 (lower is better)
Translates to: LKSSNYSSDQQSQHLRFWKVTPS*NSAGQM
Trigger: CATCTGTCCCGCAGAATTTCATGAAGGAGTAACCTT...CCAAAATCGTAGGTGTTGGCTCTGCTGGTCACTGGAGTAGTTGCTACTCTTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376261.8
3UTR CAA 90 bp CTCCGGATAGTCGGGCAGCTATGTGCTTATTCTCAGCAGGCAGTTTaGAGAAAGGAACTGCTTTCTAATGCTTTGTCTAATGCTTGGCCA +
Preference number: 2 (lower is better)
Translates to: LRIVGQLCAYSQQAV*RKELLSNALSNAWP
Trigger: TGGCCAAGCATTAGACAAAGCATTAGAAAGCAGTTCCTTTCTCAAAACTGCCTGCTGAGAATAAGCACATAGCTGCCCGACTATCCGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376261.8
3UTR-3UTR TCA 90 bp CGCACAATTCTCAAAGGAAGTTTCTCAGTAGGGGGCTTAGCTGAGGGCATGTTCTTTGCATTTAGCATTTaGGAACAGAAGAGCACGTGC +
Preference number: 2 (lower is better)
Translates to: RTILKGSFSVGGLAEGMFFAFSI*EQKSTC
Trigger: GCACGTGCTCTTCTGTTCTCAAATGCTAAATGCAAA...GAACATGCCCTCAGCTAAGCCCCCTACTGAGAAACTTCCTTTGAGAATTGTGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
3UTR-3UTR CCA 90 bp GAACAGAAGAGCACGTGCAAAATGATACCCAGTTTGAGGTTCCTCATCCTGCTACAACACCTACGATTTTaGCAGCTGGTGACACTCCAT +
Preference number: 2 (lower is better)
Translates to: EQKSTCKMIPSLRFLILLQHLRF*QLVTLH
Trigger: ATGGAGTGTCACCAGCTGCCAAAATCGTAGGTGTTG...TAGCAGGATGAGGAACCTCAAACTGGGTATCATTTTGCACGTGCTCTTCTGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
3UTR-3UTR TCA 90 bp CGCACAATTCTCAAAGGAAGTTTCTCAGTAGGGGGCTTAGCTGAGGGCATGTTCTCTTTGTCCATATTCTaGAGAGTAGCAACTACTCCA +
Preference number: 2 (lower is better)
Translates to: RTILKGSFSVGGLAEGMFSLSIF*RVATTP
Trigger: TGGAGTAGTTGCTACTCTTCAGAATATGGACAAAGA...GAACATGCCCTCAGCTAAGCCCCCTACTGAGAAACTTCCTTTGAGAATTGTGCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
3UTR-3UTR TCA 90 bp CACATAAAGACCATGGCACTGGGAATTTGGGCTAATATTAAAAATAATCTCCCTGGCATTTCTACCCGTTaGAGGGCAGGGCCTTCTCTC +
Preference number: 2 (lower is better)
Translates to: HIKTMALGIWANIKNNLPGISTR*RAGPSL
Trigger: GAGAGAAGGCCCTGCCCTTCAACGGGTAGAAATGCC...AGGGAGATTATTTTTAATATTAGCCCAAATTCCCAGTGCCATGGTCTTTATGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376261.8
3UTR-3UTR CCA 90 bp CTGAAGAGTAGCAACTACTCCAGTGACCAGCAGAGCCAACACCTACGATTTTGGTTCTCAGAGACAAAGTaGTGTTCACCTTGCATTTTG +
Preference number: 2 (lower is better)
Translates to: LKSSNYSSDQQSQHLRFWFSETK*CSPCIL
Trigger: CAAAATGCAAGGTGAACACCACTTTGTCTCTGAGAA...CCAAAATCGTAGGTGTTGGCTCTGCTGGTCACTGGAGTAGTTGCTACTCTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
3UTR CAA 90 bp TTCATGGAAGAAAAACAACCACCCATGGAATATAAAGTAACTATTTaGGGTCCCAGTGGTAGGGAGTCTAGTGGGAGAGACTTTGTGGGG +
Preference number: 2 (lower is better)
Translates to: FMEEKQPPMEYKVTI*GPSGRESSGRDFVG
Trigger: CCCCACAAAGTCTCTCCCACTAGACTCCCTACCACTGGGACCCAAAATAGTTACTTTATATTCCATGGGTGGTTGTTTTTCTTCCATGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376261.8
3UTR-3UTR TCA 90 bp ACCTTGCATTTTGTGAAGTCGCACAATTCTCAAAGGAAGTTTCTCAGTAGGGGGAATATGGCGCCAGGATaGTGTCATTATTGTCCCACA +
Preference number: 2 (lower is better)
Translates to: TLHFVKSHNSQRKFLSRGNMAPG*CHYCPT
Trigger: TGTGGGACAATAATGACATCATCCTGGCGCCATATT...CCCCCTACTGAGAAACTTCCTTTGAGAATTGTGCGACTTCACAAAATGCAAGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376261.8
3UTR-3UTR TCA 90 bp ACCTTGCATTTTGTGAAGTCGCACAATTCTCAAAGGAAGTTTCTCAGTAGGGGGAACCCCAATCTGAGGTaGCAAGACAGTATTATCCAG +
Preference number: 2 (lower is better)
Translates to: TLHFVKSHNSQRKFLSRGNPNLR*QDSIIQ
Trigger: CTGGATAATACTGTCTTGTCACCTCAGATTGGGGTT...CCCCCTACTGAGAAACTTCCTTTGAGAATTGTGCGACTTCACAAAATGCAAGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376261.8
3UTR-3UTR CCA 90 bp AACCCATTTGTTTTTCTAGACAGAAAGGGCCCAAAGCCATGTTCATATCAAGTTGGGCTCACCACATTCTaGGAGTGTGCTTCATTCCTC +
Preference number: 2 (lower is better)
Translates to: NPFVFLDRKGPKPCSYQVGLTTF*ECASFL
Trigger: GAGGAATGAAGCACACTCCCAGAATGTGGTGAGCCC...AACTTGATATGAACATGGCTTTGGGCCCTTTCTGTCTAGAAAAACAAATGGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376261.8
3UTR-3UTR CCA 90 bp ACCTTGCATTTTGTGAAGTCGCACAATTCTCAAAGGAAGTTTCTCAGTAGGGGGATGGAAATGCGCAACTaGCCTGGAGGTAAATTTCTC +
Preference number: 2 (lower is better)
Translates to: TLHFVKSHNSQRKFLSRGMEMRN*PGGKFL
Trigger: GAGAAATTTACCTCCAGGCCAGTTGCGCATTTCCAT...CCCCCTACTGAGAAACTTCCTTTGAGAATTGTGCGACTTCACAAAATGCAAGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376261.8
3UTR-3UTR TCA 90 bp ACCTTGCATTTTGTGAAGTCGCACAATTCTCAAAGGAAGTTTCTCAGTAGGGGGGAATCTGACGATGTGTaGCCCCATAAATATCTATGG +
Preference number: 2 (lower is better)
Translates to: TLHFVKSHNSQRKFLSRGESDDV*PHKYLW
Trigger: CCATAGATATTTATGGGGTCACACATCGTCAGATTC...CCCCCTACTGAGAAACTTCCTTTGAGAATTGTGCGACTTCACAAAATGCAAGGT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000376261.8
3UTR-3UTR CCA 90 bp CACGTGCAAAATGATACCCAGTTTGAGGTTCCTCATCCTGCTACTATATTTACACAACACCTACGATTTTaGCAGCTGGTGACACTCCAT +
Preference number: 2 (lower is better)
Translates to: HVQNDTQFEVPHPATIFTQHLRF*QLVTLH
Trigger: ATGGAGTGTCACCAGCTGCCAAAATCGTAGGTGTTG...TGTAAATATAGTAGCAGGATGAGGAACCTCAAACTGGGTATCATTTTGCACGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
3UTR-3UTR CCA 90 bp TTTCTTTCCTCACATCCTGTGGCAGTATATGAAGTCCATACCATGTATAGGTCTGTCTACCTAGAGAAGTaGAACAGCTTGGTGAGCAAG +
Preference number: 2 (lower is better)
Translates to: FLSSHPVAVYEVHTMYRSVYLEK*NSLVSK
Trigger: CTTGCTCACCAAGCTGTTCCACTTCTCTAGGTAGAC...AGACCTATACATGGTATGGACTTCATATACTGCCACAGGATGTGAGGAAAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376261.8
3UTR-3UTR TCA 90 bp ACCTTGCATTTTGTGAAGTCGCACAATTCTCAAAGGAAGTTTCTCAGTAGGGGGTCACCTTGCATTTTGTaGAGTCGCACAATTCTCAAA +
Preference number: 2 (lower is better)
Translates to: TLHFVKSHNSQRKFLSRGSPCIL*SRTILK
Trigger: TTTGAGAATTGTGCGACTTCACAAAATGCAAGGTGA...CCCCCTACTGAGAAACTTCCTTTGAGAATTGTGCGACTTCACAAAATGCAAGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
3UTR-3UTR TCA 90 bp AGCACGTGCAAAATGATACCCAGTTTGAGGTTCCTCATCCTGCTACTATATTTAGATTTTGGCAGCTGGTaGCACTCCATAATTGGTAAC +
Preference number: 2 (lower is better)
Translates to: STCKMIPSLRFLILLLYLDFGSW*HSIIGN
Trigger: GTTACCAATTATGGAGTGTCACCAGCTGCCAAAATC...TAAATATAGTAGCAGGATGAGGAACCTCAAACTGGGTATCATTTTGCACGTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
3UTR-3UTR TCA 90 bp TGTGGAGGGCATATAGTTAGGAAAGAGAGAGAGAGAGAGAACAGGAACAGATGCTACAGAAACACATGTTaGTTTGCAACACTGTACAGT +
Preference number: 2 (lower is better)
Translates to: CGGHIVRKERERENRNRCYRNTC*FATLYS
Trigger: ACTGTACAGTGTTGCAAATCAACATGTGTTTCTGTA...GCATCTGTTCCTGTTCTCTCTCTCTCTCTCTTTCCTAACTATATGCCCTCCACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376261.8
3UTR-3UTR CCA 90 bp AGCACGTGCAAAATGATACCCAGTTTGAGGTTCCTCATCCTGCTACTATATTTATGTTCTCTAGAGAAGTaGAACAGCTTGGTGAGCAAG +
Preference number: 2 (lower is better)
Translates to: STCKMIPSLRFLILLLYLCSLEK*NSLVSK
Trigger: CTTGCTCACCAAGCTGTTCCACTTCTCTAGAGAACA...TAAATATAGTAGCAGGATGAGGAACCTCAAACTGGGTATCATTTTGCACGTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259271.7
ENST00000648567.1
3UTR-3UTR TCA 90 bp TACACCTGTGCCTTCTTTGTCCATATTCTGAAGAGTAGCAACTACTCCAGTGACCATTCACACAGTTTGTaGCAACTTAATTGTCTACCT +
Preference number: 2 (lower is better)
Translates to: YTCAFFVHILKSSNYSSDHSHSL*QLNCLP
Trigger: AGGTAGACAATTAAGTTGTCACAAACTGTGTGAATG...GTCACTGGAGTAGTTGCTACTCTTCAGAATATGGACAAAGAAGGCACAGGTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376261.8
3UTR-3UTR TCA 90 bp ATACTTGGATCATACACAAGTTTATATTTGGTAGGAAGAACAGGTTGCCACATGGATTTTGGCAGCTGGTaGCACTCCATAATTGGTAAC +
Preference number: 2 (lower is better)
Translates to: ILGSYTSLYLVGRTGCHMDFGSW*HSIIGN
Trigger: GTTACCAATTATGGAGTGTCACCAGCTGCCAAAATC...CATGTGGCAACCTGTTCTTCCTACCAAATATAAACTTGTGTATGATCCAAGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
3UTR-3UTR GCA 90 bp TATAATCTAGGATCTGTAACTCAAAAGATAAAGCATCCTGGAGTACAGCAGGGTCTTCCCTTGTATACCTaGAGTCTGAGTACTGAACTA +
Preference number: 2 (lower is better)
Translates to: YNLGSVTQKIKHPGVQQGLPLYT*SLSTEL
Trigger: TAGTTCAGTACTCAGACTGCAGGTATACAAGGGAAG...ACCCTGCTGTACTCCAGGATGCTTTATCTTTTGAGTTACAGATCCTAGATTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376261.8
3UTR-3UTR CCA 90 bp ATTCAGAAACACCAATTTGGGAACGGTAGTTTGGCACACCTAACTAATAAATACTGTTCTCTAGAGAAGTaGAACAGCTTGGTGAGCAAG +
Preference number: 2 (lower is better)
Translates to: IQKHQFGNGSLAHLTNKYCSLEK*NSLVSK
Trigger: CTTGCTCACCAAGCTGTTCCACTTCTCTAGAGAACA...GTATTTATTAGTTAGGTGTGCCAAACTACCGTTCCCAAATTGGTGTTTCTGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259271.7
ENST00000648567.1
3UTR-3UTR CCA 90 bp CACATAAAGACCATGGCACTGGGAATTTGGGCTAATATTAAAAATAATCTCCCTTCTCCAATCAGCACTTaGAATCTGACGATGTGTGAC +
Preference number: 2 (lower is better)
Translates to: HIKTMALGIWANIKNNLPSPIST*NLTMCD
Trigger: GTCACACATCGTCAGATTCCAAGTGCTGATTGGAGA...AGGGAGATTATTTTTAATATTAGCCCAAATTCCCAGTGCCATGGTCTTTATGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376261.8
3UTR-3UTR GCA 90 bp ATTCAGAAACACCAATTTGGGAACGGTAGTTTGGCACACCTAACTAATAAATACGAACAGAAGAGCACGTaGAAAATGATACCCAGTTTG +
Preference number: 2 (lower is better)
Translates to: IQKHQFGNGSLAHLTNKYEQKST*KMIPSL
Trigger: CAAACTGGGTATCATTTTGCACGTGCTCTTCTGTTC...GTATTTATTAGTTAGGTGTGCCAAACTACCGTTCCCAAATTGGTGTTTCTGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
3UTR CCA 72 bp ATCCTGGAGTACAGCAGGGTTGGTTCACCAGGGCACTaGGCCCCACTGTCTTCTCCACGAAGGACAGCAGGT +
Preference number: 3 (lower is better)
Translates to: ILEYSRVGSPGH*APLSSPRRTAG
Trigger: ACCTGCTGTCCTTCGTGGAGAAGACAGTGGGGCCCAGTGCCCTGGTGAACCAACCCTGCTGTACTCCAGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376261.8
3UTR-3UTR CAA 90 bp GGTCCCAGTGGTAGGGAGTCTAGTGGGAGAGACTTTGTGGGGAGGAATGGGGAGCCTGGTTTGTCACGCTaGCAGAGTGAGTCCGCTAAG +
Preference number: 3 (lower is better)
Translates to: GPSGRESSGRDFVGRNGEPGLSR*QSESAK
Trigger: CTTAGCGGACTCACTCTGCAAGCGTGACAAACCAGG...CTCCCCATTCCTCCCCACAAAGTCTCTCCCACTAGACTCCCTACCACTGGGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376261.8
3UTR-3UTR CAA 90 bp GGGCATTTCTACCCGTTGAAGGGCAGGGCCTTCTCTCTTCCCTTGTATACCTGCGAGATGAAGCCTGGTTaGTCACGCTTGCAGAGTGAG +
Preference number: 3 (lower is better)
Translates to: GHFYPLKGRAFSLPLYTCEMKPG*SRLQSE
Trigger: CTCACTCTGCAAGCGTGACAAACCAGGCTTCATCTC...GCAGGTATACAAGGGAAGAGAGAAGGCCCTGCCCTTCAACGGGTAGAAATGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376261.8
3UTR CCA 72 bp ACTCAAAAGATAAAGCATCCTGGAGTACAGCAGGGTTaGTTCACCAGGGCACTGGGCCCCACTGTCTTCTCC +
Preference number: 3 (lower is better)
Translates to: TQKIKHPGVQQG*FTRALGPTVFS
Trigger: GGAGAAGACAGTGGGGCCCAGTGCCCTGGTGAACCAACCCTGCTGTACTCCAGGATGCTTTATCTTTTGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376261.8
3UTR GCA 72 bp TTTGGGCCTGAGGCTCCGGATAGTCGGGCAGCTATGTaGTTATTCTCAGCAGGCAGTTTTGAGAAAGGAACT +
Preference number: 3 (lower is better)
Translates to: FGPEAPDSRAAM*LFSAGSFEKGT
Trigger: AGTTCCTTTCTCAAAACTGCCTGCTGAGAATAAGCACATAGCTGCCCGACTATCCGGAGCCTCAGGCCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376261.8
3UTR TCA 72 bp GCAGGGCCTTCTCTCTTCCCTTGTATACCTGCAGTCTaGGTACTGAACTACCTGGTCCATTCAGAAATGGAG +
Preference number: 3 (lower is better)
Translates to: AGPSLFPCIPAV*VLNYLVHSEME
Trigger: CTCCATTTCTGAATGGACCAGGTAGTTCAGTACTCAGACTGCAGGTATACAAGGGAAGAGAGAAGGCCCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376261.8
3UTR GCA 72 bp TTGAAGGGCAGGGCCTTCTCTCTTCCCTTGTATACCTaGAGTCTGAGTACTGAACTACCTGGTCCATTCAGA +
Preference number: 3 (lower is better)
Translates to: LKGRAFSLPLYT*SLSTELPGPFR
Trigger: TCTGAATGGACCAGGTAGTTCAGTACTCAGACTGCAGGTATACAAGGGAAGAGAGAAGGCCCTGCCCTTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376261.8
3UTR-3UTR CAA 90 bp AGAGTAGCAACTACTCCAGTGACCAGCAGAGCCAACACCTACGATTTTGGCAGCAAAGTGGTGTTCACCTaGCATTTTGTGAAGTCGCAC +
Preference number: 3 (lower is better)
Translates to: RVATTPVTSRANTYDFGSKVVFT*HFVKSH
Trigger: GTGCGACTTCACAAAATGCAAGGTGAACACCACTTT...GCTGCCAAAATCGTAGGTGTTGGCTCTGCTGGTCACTGGAGTAGTTGCTACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
3UTR-3UTR CAA 90 bp AATGCCTCAAAATCTAGGGTGAGAGGCTCATTTCATGGAAGAAAAACAACCACCCTAGTGGGAGAGACTTaGTGGGGAGGAATGGGGAGG +
Preference number: 3 (lower is better)
Translates to: NASKSRVRGSFHGRKTTTLVGET*WGGMGR
Trigger: CCTCCCCATTCCTCCCCACAAAGTCTCTCCCACTAG...GGTGGTTGTTTTTCTTCCATGAAATGAGCCTCTCACCCTAGATTTTGAGGCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000376261.8
3UTR-3UTR CAA 90 bp TTTCTTTCCTCACATCCTGTGGCAGTATATGAAGTCCATACCATGTATAGGTCTTGGAGTACAGCAGGGTaGGTTCACCAGGGCACTGGG +
Preference number: 3 (lower is better)
Translates to: FLSSHPVAVYEVHTMYRSWSTAG*VHQGTG
Trigger: CCCAGTGCCCTGGTGAACCAACCCTGCTGTACTCCA...AGACCTATACATGGTATGGACTTCATATACTGCCACAGGATGTGAGGAAAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376261.8
3UTR TCA 72 bp ACCAGCAGAGCCAACACCTACGATTTTGGCAGCTGGTaGCACTCCATAATTGGTAACGTCTGTTCTCAGAGA +
Preference number: 3 (lower is better)
Translates to: TSRANTYDFGSW*HSIIGNVCSQR
Trigger: TCTCTGAGAACAGACGTTACCAATTATGGAGTGTCACCAGCTGCCAAAATCGTAGGTGTTGGCTCTGCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
3UTR TCA 72 bp TTCTCTTTCCTGGACAGTGGCAATATGGCGCCAGGATaGTGTCATTATTGTCCCACAGAGATCTCTTCTCCC +
Preference number: 3 (lower is better)
Translates to: FSFLDSGNMAPG*CHYCPTEISSP
Trigger: GGGAGAAGAGATCTCTGTGGGACAATAATGACATCATCCTGGCGCCATATTGCCACTGTCCAGGAAAGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376261.8
3UTR-3UTR CAA 90 bp CGCACAATTCTCAAAGGAAGTTTCTCAGTAGGGGGCTTAGCTGAGGGCATGTTCTTCAGAAACACCAATTaGGGAACGGTAGTTTGGCAC +
Preference number: 3 (lower is better)
Translates to: RTILKGSFSVGGLAEGMFFRNTN*GTVVWH
Trigger: GTGCCAAACTACCGTTCCCAAATTGGTGTTTCTGAA...GAACATGCCCTCAGCTAAGCCCCCTACTGAGAAACTTCCTTTGAGAATTGTGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
3UTR-3UTR CAA 90 bp CGCACAATTCTCAAAGGAAGTTTCTCAGTAGGGGGCTTAGCTGAGGGCATGTTCAATGTTGGGGGAATGTaGATGTCATTCAGAAACACC +
Preference number: 3 (lower is better)
Translates to: RTILKGSFSVGGLAEGMFNVGGM*MSFRNT
Trigger: GGTGTTTCTGAATGACATCAACATTCCCCCAACATT...GAACATGCCCTCAGCTAAGCCCCCTACTGAGAAACTTCCTTTGAGAATTGTGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
3UTR-3UTR CAA 90 bp TTTCTTTCCTCACATCCTGTGGCAGTATATGAAGTCCATACCATGTATAGGTCTTCTGAAGTGGAACCTTaGGGCCTGAGGCTCCGGATA +
Preference number: 3 (lower is better)
Translates to: FLSSHPVAVYEVHTMYRSSEVEP*GLRLRI
Trigger: TATCCGGAGCCTCAGGCCCAAAGGTTCCACTTCAGA...AGACCTATACATGGTATGGACTTCATATACTGCCACAGGATGTGAGGAAAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376261.8
3UTR CCA 72 bp AACTGGCCTGGAGGTAAATTTCTCTTTCCTGGACAGTaGCAATATGGCGCCAGGATGATGTCATTATTGTCC +
Preference number: 3 (lower is better)
Translates to: NWPGGKFLFPGQ*QYGARMMSLLS
Trigger: GGACAATAATGACATCATCCTGGCGCCATATTGCCACTGTCCAGGAAAGAGAAATTTACCTCCAGGCCAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376261.8
3UTR-3UTR CAA 90 bp CTGAAGAGTAGCAACTACTCCAGTGACCAGCAGAGCCAACACCTACGATTTTGGTTTGGGAACGGTAGTTaGGCACACCTAACTAATAAA +
Preference number: 3 (lower is better)
Translates to: LKSSNYSSDQQSQHLRFWFGNGS*AHLTNK
Trigger: TTTATTAGTTAGGTGTGCCAAACTACCGTTCCCAAA...CCAAAATCGTAGGTGTTGGCTCTGCTGGTCACTGGAGTAGTTGCTACTCTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
3UTR-3UTR CAA 90 bp CGCACAATTCTCAAAGGAAGTTTCTCAGTAGGGGGCTTAGCTGAGGGCATGTTCTACACAAGTTTATATTaGGTAGGAAGAACAGGTTGC +
Preference number: 3 (lower is better)
Translates to: RTILKGSFSVGGLAEGMFYTSLY*VGRTGC
Trigger: GCAACCTGTTCTTCCTACCAAATATAAACTTGTGTA...GAACATGCCCTCAGCTAAGCCCCCTACTGAGAAACTTCCTTTGAGAATTGTGCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
3UTR-3UTR CAA 90 bp CACATAAAGACCATGGCACTGGGAATTTGGGCTAATATTAAAAATAATCTCCCTCCAACACCTACGATTTaGGCAGCTGGTGACACTCCA +
Preference number: 3 (lower is better)
Translates to: HIKTMALGIWANIKNNLPPTPTI*AAGDTP
Trigger: TGGAGTGTCACCAGCTGCCAAAATCGTAGGTGTTGG...AGGGAGATTATTTTTAATATTAGCCCAAATTCCCAGTGCCATGGTCTTTATGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376261.8
3UTR-3UTR CAA 90 bp TGTGGAGGGCATATAGTTAGGAAAGAGAGAGAGAGAGAGAACAGGAACAGATGCCTGCTTTCTAATGCTTaGTCTAATGCTTGGCCATTA +
Preference number: 3 (lower is better)
Translates to: CGGHIVRKERERENRNRCLLSNA*SNAWPL
Trigger: TAATGGCCAAGCATTAGACAAAGCATTAGAAAGCAG...GCATCTGTTCCTGTTCTCTCTCTCTCTCTCTTTCCTAACTATATGCCCTCCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376261.8
3UTR TCA 72 bp TTCTCAGAGACAAAGTGGTGTTCACCTTGCATTTTGTaGAGTCGCACAATTCTCAAAGGAAGTTTCTCAGTA +
Preference number: 3 (lower is better)
Translates to: FSETKWCSPCIL*SRTILKGSFSV
Trigger: TACTGAGAAACTTCCTTTGAGAATTGTGCGACTTCACAAAATGCAAGGTGAACACCACTTTGTCTCTGAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
3UTR CCA 72 bp GTCTGCATATCAATCTATTGTTCTCCAATCAGCACTTaGAATCTGACGATGTGTGACCCCATAAATATCTAT +
Preference number: 3 (lower is better)
Translates to: VCISIYCSPIST*NLTMCDPINIY
Trigger: ATAGATATTTATGGGGTCACACATCGTCAGATTCCAAGTGCTGATTGGAGAACAATAGATTGATATGCAGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376261.8
3UTR TCA 72 bp CTTTGGAACAAACTACAAATACATTCACACAGTTTGTaGCAACTTAATTGTCTACCTAGAGAAGTGGAACAG +
Preference number: 3 (lower is better)
Translates to: LWNKLQIHSHSL*QLNCLPREVEQ
Trigger: CTGTTCCACTTCTCTAGGTAGACAATTAAGTTGTCACAAACTGTGTGAATGTATTTGTAGTTTGTTCCAAAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376261.8
3UTR CCA 72 bp GGGAAGCTTATGAAAATTTCAGATGGCTGGATCCTGTaGTTATATTATAGGGCATTTCTCTATGTTATATTG +
Preference number: 3 (lower is better)
Translates to: GKLMKISDGWIL*LYYRAFLYVIL
Trigger: CAATATAACATAGAGAAATGCCCTATAATATAACCACAGGATCCAGCCATCTGAAATTTTCATAAGCTTCCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376261.8
3UTR CCA 72 bp TTCCACATCTCCTTTCAAGATGATTTATTAAACTACTaGGACCTACTAGGCTTTTATTTGCTTCCTTCTTTG +
Preference number: 3 (lower is better)
Translates to: FHISFQDDLLNY*DLLGFYLLPSL
Trigger: CAAAGAAGGAAGCAAATAAAAGCCTAGTAGGTCCCAGTAGTTTAATAAATCATCTTGAAAGGAGATGTGGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376261.8
3UTR GCA 72 bp ATATTGTACAAGCTTTTACAGAAACACATGTTGATTTaGAACACTGTACAGTTCAGATCTAAAGTGCACAAC +
Preference number: 3 (lower is better)
Translates to: ILYKLLQKHMLI*NTVQFRSKVHN
Trigger: GTTGTGCACTTTAGATCTGAACTGTACAGTGTTGCAAATCAACATGTGTTTCTGTAAAAGCTTGTACAATAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS-3UTR GCA 90 bp AAGAGTAGCAACTACTCCAGTGACCAGCAGAGCCAACACCTACGATTTTGGCAGCCTGCGAGTGCGAGCTaGGGGCGAGCTGCCTCGGGC +
Preference number: 4 (lower is better)
Translates to: KSSNYSSDQQSQHLRFWQPASAS*GRAASG
Trigger: GCCCGAGGCAGCTCGCCCGCAGCTCGCACTCGCAGG...CTGCCAAAATCGTAGGTGTTGGCTCTGCTGGTCACTGGAGTAGTTGCTACTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259271.7
CDS-3UTR CCA 90 bp AGAGTAGCAACTACTCCAGTGACCAGCAGAGCCAACACCTACGATTTTGGCAGCCAGCTGCAGGGCTTCTaGTCGCAGGCGCAGGCGGCC +
Preference number: 4 (lower is better)
Translates to: RVATTPVTSRANTYDFGSQLQGF*SQAQAA
Trigger: GGCCGCCTGCGCCTGCGACCAGAAGCCCTGCAGCTG...GCTGCCAAAATCGTAGGTGTTGGCTCTGCTGGTCACTGGAGTAGTTGCTACTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR CCA 90 bp CTGAAGAGTAGCAACTACTCCAGTGACCAGCAGAGCCAACACCTACGATTTTGGCAGCTGCAGGGCTTCTaGTCGCAGGCGCAGGCGGCC +
Preference number: 4 (lower is better)
Translates to: LKSSNYSSDQQSQHLRFWQLQGF*SQAQAA
Trigger: GGCCGCCTGCGCCTGCGACCAGAAGCCCTGCAGCTG...CCAAAATCGTAGGTGTTGGCTCTGCTGGTCACTGGAGTAGTTGCTACTCTTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR TCA 90 bp GGGCATTTCTACCCGTTGAAGGGCAGGGCCTTCTCTCTTCCCTTGTATACCTGCTTCCGATGCCGCCCGTaGACTTCTGAGCCACTTGGC +
Preference number: 4 (lower is better)
Translates to: GHFYPLKGRAFSLPLYTCFRCRP*TSEPLG
Trigger: GCCAAGTGGCTCAGAAGTTCACGGGCGGCATCGGAA...GCAGGTATACAAGGGAAGAGAGAAGGCCCTGCCCTTCAACGGGTAGAAATGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS-3UTR GCA 90 bp ACAATTCTCAAAGGAAGTTTCTCAGTAGGGGGCTTAGCTGAGGGCATGTTCTCTCTGGAGCAGGTCGCCTaGGAGTGCGAGCTGCGGGCG +
Preference number: 4 (lower is better)
Translates to: TILKGSFSVGGLAEGMFSLEQVA*ECELRA
Trigger: CGCCCGCAGCTCGCACTCGCAGGCGACCTGCTCCAG...AGAGAACATGCCCTCAGCTAAGCCCCCTACTGAGAAACTTCCTTTGAGAATTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000259271.7
CDS-3UTR TCA 90 bp AAGAGTAGCAACTACTCCAGTGACCAGCAGAGCCAACACCTACGATTTTGGCAGCCGCCCGTGAACTTCTaGGCCACTTGGCACCAGGCT +
Preference number: 4 (lower is better)
Translates to: KSSNYSSDQQSQHLRFWQPPVNF*ATWHQA
Trigger: AGCCTGGTGCCAAGTGGCTCAGAAGTTCACGGGCGG...CTGCCAAAATCGTAGGTGTTGGCTCTGCTGGTCACTGGAGTAGTTGCTACTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR TCA 90 bp CGCACAATTCTCAAAGGAAGTTTCTCAGTAGGGGGCTTAGCTGAGGGCATGTTCCCGCCCGTGAACTTCTaGGCCACTTGGCACCAGGCT +
Preference number: 4 (lower is better)
Translates to: RTILKGSFSVGGLAEGMFPPVNF*ATWHQA
Trigger: AGCCTGGTGCCAAGTGGCTCAGAAGTTCACGGGCGG...GAACATGCCCTCAGCTAAGCCCCCTACTGAGAAACTTCCTTTGAGAATTGTGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR TCA 90 bp CTGAAGAGTAGCAACTACTCCAGTGACCAGCAGAGCCAACACCTACGATTTTGGTTCCGATGCCGCCCGTaGACTTCTGAGCCACTTGGC +
Preference number: 4 (lower is better)
Translates to: LKSSNYSSDQQSQHLRFWFRCRP*TSEPLG
Trigger: GCCAAGTGGCTCAGAAGTTCACGGGCGGCATCGGAA...CCAAAATCGTAGGTGTTGGCTCTGCTGGTCACTGGAGTAGTTGCTACTCTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR GCA 90 bp AGTGGTGTTCACCTTGCATTTTGTGAAGTCGCACAATTCTCAAAGGAAGTTTCTGAGCTGCGGGCGAGCTaGCTCGGGCTTGGCCCTGCG +
Preference number: 4 (lower is better)
Translates to: SGVHLAFCEVAQFSKEVSELRAS*LGLGPA
Trigger: CGCAGGGCCAAGCCCGAGGCAGCTCGCCCGCAGCTC...AGAAACTTCCTTTGAGAATTGTGCGACTTCACAAAATGCAAGGTGAACACCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259271.7
CDS-3UTR CCA 90 bp ATTGGTAACGTCTGTTCTCAGAGACAAAGTGGTGTTCACCTTGCATTTTGTGAACAGCTGCAGGGCTTCTaGTCGCAGGCGCAGGCGGCC +
Preference number: 4 (lower is better)
Translates to: IGNVCSQRQSGVHLAFCEQLQGF*SQAQAA
Trigger: GGCCGCCTGCGCCTGCGACCAGAAGCCCTGCAGCTG...TTCACAAAATGCAAGGTGAACACCACTTTGTCTCTGAGAACAGACGTTACCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR CCA 90 bp GGAAGTTTCTCAGTAGGGGGCTTAGCTGAGGGCATGTTCTCTAGAGAAGTGGAATCCACGTCACAGAGTTaGCCCTCTCCACGCCACTCA +
Preference number: 4 (lower is better)
Translates to: GSFSVGGLAEGMFSREVESTSQS*PSPRHS
Trigger: TGAGTGGCGTGGAGAGGGCCAACTCTGTGACGTGGA...TTCCACTTCTCTAGAGAACATGCCCTCAGCTAAGCCCCCTACTGAGAAACTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000259271.7
ENST00000648567.1
3UTR CAA 72 bp GGATCAATTAGCATCTCTGTCTCTGAAGTGGAACCTTaGGGCCTGAGGCTCCGGATAGTCGGGCAGCTATGT +
Preference number: 4 (lower is better)
Translates to: GSISISVSEVEP*GLRLRIVGQLC
Trigger: ACATAGCTGCCCGACTATCCGGAGCCTCAGGCCCAAAGGTTCCACTTCAGAGACAGAGATGCTAATTGATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS-3UTR TCA 90 bp ACCTTGCATTTTGTGAAGTCGCACAATTCTCAAAGGAAGTTTCTCAGTAGGGGGCCGCCCGTGAACTTCTaGGCCACTTGGCACCAGGCT +
Preference number: 4 (lower is better)
Translates to: TLHFVKSHNSQRKFLSRGPPVNF*ATWHQA
Trigger: AGCCTGGTGCCAAGTGGCTCAGAAGTTCACGGGCGG...CCCCCTACTGAGAAACTTCCTTTGAGAATTGTGCGACTTCACAAAATGCAAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR TCA 90 bp AGAGTAGCAACTACTCCAGTGACCAGCAGAGCCAACACCTACGATTTTGGCAGCGGAGAAACGCGTAGTTaGCATCCACTTTGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: RVATTPVTSRANTYDFGSGETRS*HPLWSS
Trigger: GCTGCTCCAAAGTGGATGTCAACTACGCGTTTCTCC...GCTGCCAAAATCGTAGGTGTTGGCTCTGCTGGTCACTGGAGTAGTTGCTACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR GCA 90 bp TACACCTGTGCCTTCTTTGTCCATATTCTGAAGAGTAGCAACTACTCCAGTGACACCAGGCTCGCGCTGTaGCGGGATTCTCGGAATCCC +
Preference number: 4 (lower is better)
Translates to: YTCAFFVHILKSSNYSSDTRLAL*RDSRNP
Trigger: GGGATTCCGAGAATCCCGGCACAGCGCGAGCCTGGT...GTCACTGGAGTAGTTGCTACTCTTCAGAATATGGACAAAGAAGGCACAGGTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259271.7
ENST00000376261.8
CDS-3UTR CCA 90 bp ATACTTGGATCATACACAAGTTTATATTTGGTAGGAAGAACAGGTTGCCACATGGAGCTGCCTCGGGCTTaGCCCTGCGCGCGCGTGCGT +
Preference number: 4 (lower is better)
Translates to: ILGSYTSLYLVGRTGCHMELPRA*PCARVR
Trigger: ACGCACGCGCGCGCAGGGCCAAGCCCGAGGCAGCTC...CATGTGGCAACCTGTTCTTCCTACCAAATATAAACTTGTGTATGATCCAAGTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259271.7
CDS-3UTR CCA 90 bp TGTGGAGGGCATATAGTTAGGAAAGAGAGAGAGAGAGAGAACAGGAACAGATGCGGAGTACAGCAGGGTTaGTTCACCAGGGCACTGGGC +
Preference number: 4 (lower is better)
Translates to: CGGHIVRKERERENRNRCGVQQG*FTRALG
Trigger: GCCCAGTGCCCTGGTGAACCAACCCTGCTGTACTCC...GCATCTGTTCCTGTTCTCTCTCTCTCTCTCTTTCCTAACTATATGCCCTCCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS-3UTR TCA 90 bp AGAGTAGCAACTACTCCAGTGACCAGCAGAGCCAACACCTACGATTTTGGCAGCAAGTCAATGTCTTGGTaGGTTGCCGCTGGGTTTGAG +
Preference number: 4 (lower is better)
Translates to: RVATTPVTSRANTYDFGSKSMSW*VAAGFE
Trigger: CTCAAACCCAGCGGCAACTCACCAAGACATTGACTT...GCTGCCAAAATCGTAGGTGTTGGCTCTGCTGGTCACTGGAGTAGTTGCTACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR TCA 90 bp ACAATTCTCAAAGGAAGTTTCTCAGTAGGGGGCTTAGCTGAGGGCATGTTCTCTGGCATTTCTACCCGTTaGAGGGCAGGGCCTTCTCTC +
Preference number: 4 (lower is better)
Translates to: TILKGSFSVGGLAEGMFSGISTR*RAGPSL
Trigger: GAGAGAAGGCCCTGCCCTTCAACGGGTAGAAATGCC...AGAGAACATGCCCTCAGCTAAGCCCCCTACTGAGAAACTTCCTTTGAGAATTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS-3UTR GCA 90 bp ATACTTGGATCATACACAAGTTTATATTTGGTAGGAAGAACAGGTTGCCACATGCAGGTCGCCTGCGAGTaGGAGCTGCGGGCGAGCTGC +
Preference number: 4 (lower is better)
Translates to: ILGSYTSLYLVGRTGCHMQVACE*ELRASC
Trigger: GCAGCTCGCCCGCAGCTCGCACTCGCAGGCGACCTG...CATGTGGCAACCTGTTCTTCCTACCAAATATAAACTTGTGTATGATCCAAGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259271.7
CDS-3UTR CCA 90 bp GAACAGAAGAGCACGTGCAAAATGATACCCAGTTTGAGGTTCCTCATCCTGCTAAGATGCCATCGGCTTTaGAGACTGGAGCAGGTCGCC +
Preference number: 4 (lower is better)
Translates to: EQKSTCKMIPSLRFLILLRCHRL*RLEQVA
Trigger: GGCGACCTGCTCCAGTCTCCAAAGCCGATGGCATCT...TAGCAGGATGAGGAACCTCAAACTGGGTATCATTTTGCACGTGCTCTTCTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259271.7
ENST00000376261.8
CDS-3UTR TCA 90 bp CTGAAGAGTAGCAACTACTCCAGTGACCAGCAGAGCCAACACCTACGATTTTGGCCAAGGGTTGGTAGCTaGCCATTGTGGTTCCATACT +
Preference number: 4 (lower is better)
Translates to: LKSSNYSSDQQSQHLRFWPRVGS*PLWFHT
Trigger: AGTATGGAACCACAATGGTCAGCTACCAACCCTTGG...CCAAAATCGTAGGTGTTGGCTCTGCTGGTCACTGGAGTAGTTGCTACTCTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR GCA 90 bp TACACCTGTGCCTTCTTTGTCCATATTCTGAAGAGTAGCAACTACTCCAGTGACGGGAGGGGATGGAAATaGGCAACTGGCCTGGAGGTA +
Preference number: 4 (lower is better)
Translates to: YTCAFFVHILKSSNYSSDGRGWK*ATGLEV
Trigger: TACCTCCAGGCCAGTTGCGCATTTCCATCCCCTCCC...GTCACTGGAGTAGTTGCTACTCTTCAGAATATGGACAAAGAAGGCACAGGTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS-3UTR CCA 90 bp TGTGGAGGGCATATAGTTAGGAAAGAGAGAGAGAGAGAGAACAGGAACAGATGCATCGCCAGAGCCCCCTaGCCAGCCAATGATTTCTCT +
Preference number: 4 (lower is better)
Translates to: CGGHIVRKERERENRNRCIARAP*PANDFS
Trigger: AGAGAAATCATTGGCTGGCCAGGGGGCTCTGGCGAT...GCATCTGTTCCTGTTCTCTCTCTCTCTCTCTTTCCTAACTATATGCCCTCCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS-3UTR CCA 90 bp GGGCATTTCTACCCGTTGAAGGGCAGGGCCTTCTCTCTTCCCTTGTATACCTGCTTTCTCCTTGACTTCTaGGAACATCTTAAAGCGTGC +
Preference number: 4 (lower is better)
Translates to: GHFYPLKGRAFSLPLYTCFLLDF*EHLKAC
Trigger: GCACGCTTTAAGATGTTCCCAGAAGTCAAGGAGAAA...GCAGGTATACAAGGGAAGAGAGAAGGCCCTGCCCTTCAACGGGTAGAAATGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS-3UTR CCA 90 bp GAACAGAAGAGCACGTGCAAAATGATACCCAGTTTGAGGTTCCTCATCCTGCTACGGTGGTTCCAGCTGTaGCACTCACGAGGAAAGGAA +
Preference number: 4 (lower is better)
Translates to: EQKSTCKMIPSLRFLILLRWFQL*HSRGKE
Trigger: TTCCTTTCCTCGTGAGTGCCACAGCTGGAACCACCG...TAGCAGGATGAGGAACCTCAAACTGGGTATCATTTTGCACGTGCTCTTCTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR CCA 90 bp TACACCTGTGCCTTCTTTGTCCATATTCTGAAGAGTAGCAACTACTCCAGTGACGGAATGGGGAGGGGATaGAAATGCGCAACTGGCCTG +
Preference number: 4 (lower is better)
Translates to: YTCAFFVHILKSSNYSSDGMGRG*KCATGL
Trigger: CAGGCCAGTTGCGCATTTCCATCCCCTCCCCATTCC...GTCACTGGAGTAGTTGCTACTCTTCAGAATATGGACAAAGAAGGCACAGGTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS-3UTR CCA 90 bp GAACAGAAGAGCACGTGCAAAATGATACCCAGTTTGAGGTTCCTCATCCTGCTACTTTGTGGGGAGGAATaGGGAGGGGATGGAAATGCG +
Preference number: 4 (lower is better)
Translates to: EQKSTCKMIPSLRFLILLLCGEE*GGDGNA
Trigger: CGCATTTCCATCCCCTCCCCATTCCTCCCCACAAAG...TAGCAGGATGAGGAACCTCAAACTGGGTATCATTTTGCACGTGCTCTTCTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS-3UTR CCA 90 bp TACACCTGTGCCTTCTTTGTCCATATTCTGAAGAGTAGCAACTACTCCAGTGACGTGGGAGAGACTTTGTaGGGAGGAATGGGGAGGGGA +
Preference number: 4 (lower is better)
Translates to: YTCAFFVHILKSSNYSSDVGETL*GGMGRG
Trigger: TCCCCTCCCCATTCCTCCCCACAAAGTCTCTCCCAC...GTCACTGGAGTAGTTGCTACTCTTCAGAATATGGACAAAGAAGGCACAGGTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376261.8
3UTR CAA 72 bp GGACAGTGGCAATATGGCGCCAGGATGATGTCATTATaGTCCCACAGAGATCTCTTCTCCCAAGGCCAACTT +
Preference number: 4 (lower is better)
Translates to: GQWQYGARMMSL*SHRDLFSQGQL
Trigger: AAGTTGGCCTTGGGAGAAGAGATCTCTGTGGGACAATAATGACATCATCCTGGCGCCATATTGCCACTGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS-3UTR TCA 90 bp CGCACAATTCTCAAAGGAAGTTTCTCAGTAGGGGGCTTAGCTGAGGGCATGTTCGTTAGTATTTGCTGTTaGTGTCAGCCAGTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: RTILKGSFSVGGLAEGMFVSICC*CQPVCC
Trigger: GCAGCAGACTGGCTGACATCAACAGCAAATACTAAC...GAACATGCCCTCAGCTAAGCCCCCTACTGAGAAACTTCCTTTGAGAATTGTGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR TCA 90 bp AGAGTAGCAACTACTCCAGTGACCAGCAGAGCCAACACCTACGATTTTGGCAGCGATTTTGGCAGCTGGTaGCACTCCATAATTGGTAAC +
Preference number: 4 (lower is better)
Translates to: RVATTPVTSRANTYDFGSDFGSW*HSIIGN
Trigger: GTTACCAATTATGGAGTGTCACCAGCTGCCAAAATC...GCTGCCAAAATCGTAGGTGTTGGCTCTGCTGGTCACTGGAGTAGTTGCTACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR TCA 90 bp AGAGTAGCAACTACTCCAGTGACCAGCAGAGCCAACACCTACGATTTTGGCAGCTGCACAACCCCAATCTaGGGTGACAAGACAGTATTA +
Preference number: 4 (lower is better)
Translates to: RVATTPVTSRANTYDFGSCTTPI*GDKTVL
Trigger: TAATACTGTCTTGTCACCTCAGATTGGGGTTGTGCA...GCTGCCAAAATCGTAGGTGTTGGCTCTGCTGGTCACTGGAGTAGTTGCTACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS-3UTR GCA 90 bp GGTCCCAGTGGTAGGGAGTCTAGTGGGAGAGACTTTGTGGGGAGGAATGGGGAGAGAGTTGTTTGGCAATaGATCAAAATTTCCTCCAAA +
Preference number: 4 (lower is better)
Translates to: GPSGRESSGRDFVGRNGERVVWQ*IKISSK
Trigger: TTTGGAGGAAATTTTGATGCATTGCCAAACAACTCT...CTCCCCATTCCTCCCCACAAAGTCTCTCCCACTAGACTCCCTACCACTGGGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS-3UTR GCA 90 bp GGGCATTTCTACCCGTTGAAGGGCAGGGCCTTCTCTCTTCCCTTGTATACCTGCAAACATTTATCAACATaGGCTTCAAACCCGGTAGTC +
Preference number: 4 (lower is better)
Translates to: GHFYPLKGRAFSLPLYTCKHLST*ASNPVV
Trigger: GACTACCGGGTTTGAAGCGCATGTTGATAAATGTTT...GCAGGTATACAAGGGAAGAGAGAAGGCCCTGCCCTTCAACGGGTAGAAATGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS-3UTR CCA 90 bp ACAATTCTCAAAGGAAGTTTCTCAGTAGGGGGCTTAGCTGAGGGCATGTTCTCTTCTGGCTTTAATCACTaGAGCCACCTTCGAGAGGCG +
Preference number: 4 (lower is better)
Translates to: TILKGSFSVGGLAEGMFSSGFNH*SHLREA
Trigger: CGCCTCTCGAAGGTGGCTCCAGTGATTAAAGCCAGA...AGAGAACATGCCCTCAGCTAAGCCCCCTACTGAGAAACTTCCTTTGAGAATTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR CCA 90 bp CGCACAATTCTCAAAGGAAGTTTCTCAGTAGGGGGCTTAGCTGAGGGCATGTTCCAACACCTACGATTTTaGCAGCTGGTGACACTCCAT +
Preference number: 4 (lower is better)
Translates to: RTILKGSFSVGGLAEGMFQHLRF*QLVTLH
Trigger: ATGGAGTGTCACCAGCTGCCAAAATCGTAGGTGTTG...GAACATGCCCTCAGCTAAGCCCCCTACTGAGAAACTTCCTTTGAGAATTGTGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR CCA 90 bp AGCACGTGCAAAATGATACCCAGTTTGAGGTTCCTCATCCTGCTACTATATTTAGGTTCACCAGGGCACTaGGCCCCACTGTCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: STCKMIPSLRFLILLLYLGSPGH*APLSSP
Trigger: TGGAGAAGACAGTGGGGCCCAGTGCCCTGGTGAACC...TAAATATAGTAGCAGGATGAGGAACCTCAAACTGGGTATCATTTTGCACGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS-3UTR TCA 90 bp TACACCTGTGCCTTCTTTGTCCATATTCTGAAGAGTAGCAACTACTCCAGTGACGGAGAAACGCGTAGTTaGCATCCACTTTGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: YTCAFFVHILKSSNYSSDGETRS*HPLWSS
Trigger: GCTGCTCCAAAGTGGATGTCAACTACGCGTTTCTCC...GTCACTGGAGTAGTTGCTACTCTTCAGAATATGGACAAAGAAGGCACAGGTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR TCA 90 bp ACAATTCTCAAAGGAAGTTTCTCAGTAGGGGGCTTAGCTGAGGGCATGTTCTCTAAGTCAATGTCTTGGTaGGTTGCCGCTGGGTTTGAG +
Preference number: 4 (lower is better)
Translates to: TILKGSFSVGGLAEGMFSKSMSW*VAAGFE
Trigger: CTCAAACCCAGCGGCAACTCACCAAGACATTGACTT...AGAGAACATGCCCTCAGCTAAGCCCCCTACTGAGAAACTTCCTTTGAGAATTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR GCA 90 bp TACACCTGTGCCTTCTTTGTCCATATTCTGAAGAGTAGCAACTACTCCAGTGACAGGAGAGCAGAGCACTaGAAAGGGACTCCCATCATC +
Preference number: 4 (lower is better)
Translates to: YTCAFFVHILKSSNYSSDRRAEH*KGTPII
Trigger: GATGATGGGAGTCCCTTTGCAGTGCTCTGCTCTCCT...GTCACTGGAGTAGTTGCTACTCTTCAGAATATGGACAAAGAAGGCACAGGTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR GCA 90 bp AGAGTAGCAACTACTCCAGTGACCAGCAGAGCCAACACCTACGATTTTGGCAGCAGGCATGCATTTGGTTaGAATTCTGCATCAATCCCT +
Preference number: 4 (lower is better)
Translates to: RVATTPVTSRANTYDFGSRHAFG*NSASIP
Trigger: AGGGATTGATGCAGAATTGCAACCAAATGCATGCCT...GCTGCCAAAATCGTAGGTGTTGGCTCTGCTGGTCACTGGAGTAGTTGCTACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR GCA 90 bp GCTCCGGATAGTCGGGCAGCTATGTGCTTATTCTCAGCAGGCAGTTTTGAGAAACACATTCTGGGAGTGTaGTTCATTCCTCTTTGCTCA +
Preference number: 4 (lower is better)
Translates to: APDSRAAMCLFSAGSFEKHILGV*FIPLCS
Trigger: TGAGCAAAGAGGAATGAAGCACACTCCCAGAATGTG...TTTCTCAAAACTGCCTGCTGAGAATAAGCACATAGCTGCCCGACTATCCGGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS-3UTR CCA 90 bp ATTGGTAACGTCTGTTCTCAGAGACAAAGTGGTGTTCACCTTGCATTTTGTGAAATCGGCTTTGGAGACTaGAGCAGGTCGCCTGCGAGT +
Preference number: 4 (lower is better)
Translates to: IGNVCSQRQSGVHLAFCEIGFGD*SRSPAS
Trigger: ACTCGCAGGCGACCTGCTCCAGTCTCCAAAGCCGAT...TTCACAAAATGCAAGGTGAACACCACTTTGTCTCTGAGAACAGACGTTACCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259271.7
ENST00000376261.8
CDS-3UTR CCA 90 bp AGTGGTGTTCACCTTGCATTTTGTGAAGTCGCACAATTCTCAAAGGAAGTTTCTAGATGCCATCGGCTTTaGAGACTGGAGCAGGTCGCC +
Preference number: 4 (lower is better)
Translates to: SGVHLAFCEVAQFSKEVSRCHRL*RLEQVA
Trigger: GGCGACCTGCTCCAGTCTCCAAAGCCGATGGCATCT...AGAAACTTCCTTTGAGAATTGTGCGACTTCACAAAATGCAAGGTGAACACCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259271.7
ENST00000376261.8
CDS-3UTR CCA 90 bp AGAGTAGCAACTACTCCAGTGACCAGCAGAGCCAACACCTACGATTTTGGCAGCTTCCTCCAAATTTTGTaGTTGGTCTGCCAATTCCCA +
Preference number: 4 (lower is better)
Translates to: RVATTPVTSRANTYDFGSFLQIL*LVCQFP
Trigger: TGGGAATTGGCAGACCAACCACAAAATTTGGAGGAA...GCTGCCAAAATCGTAGGTGTTGGCTCTGCTGGTCACTGGAGTAGTTGCTACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR CCA 90 bp GGAAGTTTCTCAGTAGGGGGCTTAGCTGAGGGCATGTTCTCTAGAGAAGTGGAATGTTCTCTAGAGAAGTaGAACAGCTTGGTGAGCAAG +
Preference number: 4 (lower is better)
Translates to: GSFSVGGLAEGMFSREVECSLEK*NSLVSK
Trigger: CTTGCTCACCAAGCTGTTCCACTTCTCTAGAGAACA...TTCCACTTCTCTAGAGAACATGCCCTCAGCTAAGCCCCCTACTGAGAAACTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000259271.7
ENST00000648567.1
CDS-3UTR TCA 90 bp ACCTTGCATTTTGTGAAGTCGCACAATTCTCAAAGGAAGTTTCTCAGTAGGGGGCCAAGGGTTGGTAGCTaGCCATTGTGGTTCCATACT +
Preference number: 4 (lower is better)
Translates to: TLHFVKSHNSQRKFLSRGPRVGS*PLWFHT
Trigger: AGTATGGAACCACAATGGTCAGCTACCAACCCTTGG...CCCCCTACTGAGAAACTTCCTTTGAGAATTGTGCGACTTCACAAAATGCAAGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR TCA 90 bp ACCTTGCATTTTGTGAAGTCGCACAATTCTCAAAGGAAGTTTCTCAGTAGGGGGCCATGCGGAAGAAATTaGCCTTGTCTCCCAAGGGTT +
Preference number: 4 (lower is better)
Translates to: TLHFVKSHNSQRKFLSRGPCGRN*PCLPRV
Trigger: AACCCTTGGGAGACAAGGTCAATTTCTTCCGCATGG...CCCCCTACTGAGAAACTTCCTTTGAGAATTGTGCGACTTCACAAAATGCAAGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR TCA 90 bp TTCTCAGTAGGGGGCTTAGCTGAGGGCATGTTCTCTAGAGAAGTGGAACAGCTTTTTGCATTTAGCATTTaGGAACAGAAGAGCACGTGC +
Preference number: 4 (lower is better)
Translates to: FSVGGLAEGMFSREVEQLFAFSI*EQKSTC
Trigger: GCACGTGCTCTTCTGTTCTCAAATGCTAAATGCAAA...AAGCTGTTCCACTTCTCTAGAGAACATGCCCTCAGCTAAGCCCCCTACTGAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000259271.7
ENST00000648567.1
CDS-3UTR GCA 90 bp GGGCATTTCTACCCGTTGAAGGGCAGGGCCTTCTCTCTTCCCTTGTATACCTGCATTTTGTGGTTGGTCTaGCAATTCCCAATTATATTC +
Preference number: 4 (lower is better)
Translates to: GHFYPLKGRAFSLPLYTCILWLV*QFPIIF
Trigger: GAATATAATTGGGAATTGGCAGACCAACCACAAAAT...GCAGGTATACAAGGGAAGAGAGAAGGCCCTGCCCTTCAACGGGTAGAAATGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS-3UTR GCA 90 bp CGCACAATTCTCAAAGGAAGTTTCTCAGTAGGGGGCTTAGCTGAGGGCATGTTCAGGCATGCATTTGGTTaGAATTCTGCATCAATCCCT +
Preference number: 4 (lower is better)
Translates to: RTILKGSFSVGGLAEGMFRHAFG*NSASIP
Trigger: AGGGATTGATGCAGAATTGCAACCAAATGCATGCCT...GAACATGCCCTCAGCTAAGCCCCCTACTGAGAAACTTCCTTTGAGAATTGTGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR GCA 90 bp CGCACAATTCTCAAAGGAAGTTTCTCAGTAGGGGGCTTAGCTGAGGGCATGTTCGAACAGAAGAGCACGTaGAAAATGATACCCAGTTTG +
Preference number: 4 (lower is better)
Translates to: RTILKGSFSVGGLAEGMFEQKST*KMIPSL
Trigger: CAAACTGGGTATCATTTTGCACGTGCTCTTCTGTTC...GAACATGCCCTCAGCTAAGCCCCCTACTGAGAAACTTCCTTTGAGAATTGTGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR CCA 90 bp AGGTTCCTCATCCTGCTACTATATTTACACCTGTGCCTTCTTTGTCCATATTCTATCGCCAGAGCCCCCTaGCCAGCCAATGATTTCTCT +
Preference number: 4 (lower is better)
Translates to: RFLILLLYLHLCLLCPYSIARAP*PANDFS
Trigger: AGAGAAATCATTGGCTGGCCAGGGGGCTCTGGCGAT...AGAATATGGACAAAGAAGGCACAGGTGTAAATATAGTAGCAGGATGAGGAACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR CCA 90 bp CACGTGCAAAATGATACCCAGTTTGAGGTTCCTCATCCTGCTACTATATTTACACGGTGGTTCCAGCTGTaGCACTCACGAGGAAAGGAA +
Preference number: 4 (lower is better)
Translates to: HVQNDTQFEVPHPATIFTRWFQL*HSRGKE
Trigger: TTCCTTTCCTCGTGAGTGCCACAGCTGGAACCACCG...TGTAAATATAGTAGCAGGATGAGGAACCTCAAACTGGGTATCATTTTGCACGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR CCA 90 bp TGTGGAGGGCATATAGTTAGGAAAGAGAGAGAGAGAGAGAACAGGAACAGATGCGTCTACCTAGAGAAGTaGAACAGCTTGGTGAGCAAG +
Preference number: 4 (lower is better)
Translates to: CGGHIVRKERERENRNRCVYLEK*NSLVSK
Trigger: CTTGCTCACCAAGCTGTTCCACTTCTCTAGGTAGAC...GCATCTGTTCCTGTTCTCTCTCTCTCTCTCTTTCCTAACTATATGCCCTCCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS-3UTR CCA 90 bp AAGAGTAGCAACTACTCCAGTGACCAGCAGAGCCAACACCTACGATTTTGGCAGGATTCAGGGGCAATTTaGCACTATTCAGTCCTACTA +
Preference number: 4 (lower is better)
Translates to: KSSNYSSDQQSQHLRFWQDSGAI*HYSVLL
Trigger: TAGTAGGACTGAATAGTGCCAAATTGCCCCTGAATC...CTGCCAAAATCGTAGGTGTTGGCTCTGCTGGTCACTGGAGTAGTTGCTACTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS-3UTR CCA 90 bp GCTCCGGATAGTCGGGCAGCTATGTGCTTATTCTCAGCAGGCAGTTTTGAGAAACCGCTAAGAGTAAAATaGGTGGAAAACTTAAAGGGG +
Preference number: 4 (lower is better)
Translates to: APDSRAAMCLFSAGSFEKPLRVK*VENLKG
Trigger: CCCCTTTAAGTTTTCCACCCATTTTACTCTTAGCGG...TTTCTCAAAACTGCCTGCTGAGAATAAGCACATAGCTGCCCGACTATCCGGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS-3UTR CCA 90 bp AGAGTAGCAACTACTCCAGTGACCAGCAGAGCCAACACCTACGATTTTGGCAGCATTTGCTTCCTTCTTTaGGCTACAGTTGGTAAGGAT +
Preference number: 4 (lower is better)
Translates to: RVATTPVTSRANTYDFGSICFLL*ATVGKD
Trigger: ATCCTTACCAACTGTAGCCCAAAGAAGGAAGCAAAT...GCTGCCAAAATCGTAGGTGTTGGCTCTGCTGGTCACTGGAGTAGTTGCTACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS-3UTR TCA 90 bp ATTGGTAACGTCTGTTCTCAGAGACAAAGTGGTGTTCACCTTGCATTTTGTGAAGGAGAAACGCGTAGTTaGCATCCACTTTGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: IGNVCSQRQSGVHLAFCEGETRS*HPLWSS
Trigger: GCTGCTCCAAAGTGGATGTCAACTACGCGTTTCTCC...TTCACAAAATGCAAGGTGAACACCACTTTGTCTCTGAGAACAGACGTTACCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR TCA 90 bp TACACCTGTGCCTTCTTTGTCCATATTCTGAAGAGTAGCAACTACTCCAGTGACGTTAGTATTTGCTGTTaGTGTCAGCCAGTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: YTCAFFVHILKSSNYSSDVSICC*CQPVCC
Trigger: GCAGCAGACTGGCTGACATCAACAGCAAATACTAAC...GTCACTGGAGTAGTTGCTACTCTTCAGAATATGGACAAAGAAGGCACAGGTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR TCA 90 bp CGCACAATTCTCAAAGGAAGTTTCTCAGTAGGGGGCTTAGCTGAGGGCATGTTCTCACCTTGCATTTTGTaGAGTCGCACAATTCTCAAA +
Preference number: 4 (lower is better)
Translates to: RTILKGSFSVGGLAEGMFSPCIL*SRTILK
Trigger: TTTGAGAATTGTGCGACTTCACAAAATGCAAGGTGA...GAACATGCCCTCAGCTAAGCCCCCTACTGAGAAACTTCCTTTGAGAATTGTGCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR TCA 90 bp AAGAGTAGCAACTACTCCAGTGACCAGCAGAGCCAACACCTACGATTTTGGCAGTCACCTTGCATTTTGTaGAGTCGCACAATTCTCAAA +
Preference number: 4 (lower is better)
Translates to: KSSNYSSDQQSQHLRFWQSPCIL*SRTILK
Trigger: TTTGAGAATTGTGCGACTTCACAAAATGCAAGGTGA...CTGCCAAAATCGTAGGTGTTGGCTCTGCTGGTCACTGGAGTAGTTGCTACTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR TCA 90 bp AAGAGTAGCAACTACTCCAGTGACCAGCAGAGCCAACACCTACGATTTTGGCAGTACCCTAATTTAATCTaGGATGAAGCCTGGTTTGTC +
Preference number: 4 (lower is better)
Translates to: KSSNYSSDQQSQHLRFWQYPNLI*DEAWFV
Trigger: GACAAACCAGGCTTCATCTCAGATTAAATTAGGGTA...CTGCCAAAATCGTAGGTGTTGGCTCTGCTGGTCACTGGAGTAGTTGCTACTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS-3UTR TCA 90 bp GAACAGAAGAGCACGTGCAAAATGATACCCAGTTTGAGGTTCCTCATCCTGCTAGTAGGGGGAAGCTTATaGAAATTTCAGATGGCTGGA +
Preference number: 4 (lower is better)
Translates to: EQKSTCKMIPSLRFLILLVGGSL*KFQMAG
Trigger: TCCAGCCATCTGAAATTTTCATAAGCTTCCCCCTAC...TAGCAGGATGAGGAACCTCAAACTGGGTATCATTTTGCACGTGCTCTTCTGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS-3UTR TCA 90 bp AACCCATTTGTTTTTCTAGACAGAAAGGGCCCAAAGCCATGTTCATATCAAGTTGGCTCTCAGCCAATTTaGAGGAGTACTGGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: NPFVFLDRKGPKPCSYQVGSQPI*RSTGKG
Trigger: CCCCTTCCCAGTACTCCTTCAAATTGGCTGAGAGCC...AACTTGATATGAACATGGCTTTGGGCCCTTTCTGTCTAGAAAAACAAATGGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS-3UTR GCA 90 bp CACGTGCAAAATGATACCCAGTTTGAGGTTCCTCATCCTGCTACTATATTTACACGGCAGCAGGTCTGTTaGATGGAGAAACGCGTAGTT +
Preference number: 4 (lower is better)
Translates to: HVQNDTQFEVPHPATIFTRQQVC*MEKRVV
Trigger: AACTACGCGTTTCTCCATGCAACAGACCTGCTGCCG...TGTAAATATAGTAGCAGGATGAGGAACCTCAAACTGGGTATCATTTTGCACGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR GCA 90 bp TTCTCAGTAGGGGGCTTAGCTGAGGGCATGTTCTCTAGAGAAGTGGAACAGCTTGAACATCTTAAAGCGTaGGATCATCATGGCATACAT +
Preference number: 4 (lower is better)
Translates to: FSVGGLAEGMFSREVEQLEHLKA*DHHGIH
Trigger: ATGTATGCCATGATGATCGCACGCTTTAAGATGTTC...AAGCTGTTCCACTTCTCTAGAGAACATGCCCTCAGCTAAGCCCCCTACTGAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000259271.7
ENST00000648567.1
CDS-3UTR GCA 90 bp CTGAAGAGTAGCAACTACTCCAGTGACCAGCAGAGCCAACACCTACGATTTTGGGAACATCTTAAAGCGTaGGATCATCATGGCATACAT +
Preference number: 4 (lower is better)
Translates to: LKSSNYSSDQQSQHLRFWEHLKA*DHHGIH
Trigger: ATGTATGCCATGATGATCGCACGCTTTAAGATGTTC...CCAAAATCGTAGGTGTTGGCTCTGCTGGTCACTGGAGTAGTTGCTACTCTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR GCA 90 bp AGTGGTGTTCACCTTGCATTTTGTGAAGTCGCACAATTCTCAAAGGAAGTTTCTAGGAGAGCAGAGCACTaGAAAGGGACTCCCATCATC +
Preference number: 4 (lower is better)
Translates to: SGVHLAFCEVAQFSKEVSRRAEH*KGTPII
Trigger: GATGATGGGAGTCCCTTTGCAGTGCTCTGCTCTCCT...AGAAACTTCCTTTGAGAATTGTGCGACTTCACAAAATGCAAGGTGAACACCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR CCA 90 bp ATACTTGGATCATACACAAGTTTATATTTGGTAGGAAGAACAGGTTGCCACATGATCGGCTTTGGAGACTaGAGCAGGTCGCCTGCGAGT +
Preference number: 4 (lower is better)
Translates to: ILGSYTSLYLVGRTGCHMIGFGD*SRSPAS
Trigger: ACTCGCAGGCGACCTGCTCCAGTCTCCAAAGCCGAT...CATGTGGCAACCTGTTCTTCCTACCAAATATAAACTTGTGTATGATCCAAGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259271.7
ENST00000376261.8
CDS-3UTR CCA 90 bp AGAGTAGCAACTACTCCAGTGACCAGCAGAGCCAACACCTACGATTTTGGCAGCTCCAAATTTTGTGGTTaGTCTGCCAATTCCCAATTA +
Preference number: 4 (lower is better)
Translates to: RVATTPVTSRANTYDFGSSKFCG*SANSQL
Trigger: TAATTGGGAATTGGCAGACCAACCACAAAATTTGGA...GCTGCCAAAATCGTAGGTGTTGGCTCTGCTGGTCACTGGAGTAGTTGCTACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR CCA 90 bp ATACTTGGATCATACACAAGTTTATATTTGGTAGGAAGAACAGGTTGCCACATGTCCACGTCACAGAGTTaGCCCTCTCCACGCCACTCA +
Preference number: 4 (lower is better)
Translates to: ILGSYTSLYLVGRTGCHMSTSQS*PSPRHS
Trigger: TGAGTGGCGTGGAGAGGGCCAACTCTGTGACGTGGA...CATGTGGCAACCTGTTCTTCCTACCAAATATAAACTTGTGTATGATCCAAGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR CCA 90 bp CACATAAAGACCATGGCACTGGGAATTTGGGCTAATATTAAAAATAATCTCCCTTCCACGTCACAGAGTTaGCCCTCTCCACGCCACTCA +
Preference number: 4 (lower is better)
Translates to: HIKTMALGIWANIKNNLPSTSQS*PSPRHS
Trigger: TGAGTGGCGTGGAGAGGGCCAACTCTGTGACGTGGA...AGGGAGATTATTTTTAATATTAGCCCAAATTCCCAGTGCCATGGTCTTTATGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS-3UTR CCA 90 bp TACACCTGTGCCTTCTTTGTCCATATTCTGAAGAGTAGCAACTACTCCAGTGACTTAAAAACATCAACGTaGCGTCCGCACTGTAAGGCC +
Preference number: 4 (lower is better)
Translates to: YTCAFFVHILKSSNYSSDLKTST*RPHCKA
Trigger: GGCCTTACAGTGCGGACGCCACGTTGATGTTTTTAA...GTCACTGGAGTAGTTGCTACTCTTCAGAATATGGACAAAGAAGGCACAGGTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR CCA 90 bp AGTGGTGTTCACCTTGCATTTTGTGAAGTCGCACAATTCTCAAAGGAAGTTTCTTCTGGCTTTAATCACTaGAGCCACCTTCGAGAGGCG +
Preference number: 4 (lower is better)
Translates to: SGVHLAFCEVAQFSKEVSSGFNH*SHLREA
Trigger: CGCCTCTCGAAGGTGGCTCCAGTGATTAAAGCCAGA...AGAAACTTCCTTTGAGAATTGTGCGACTTCACAAAATGCAAGGTGAACACCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR CCA 90 bp CGCACAATTCTCAAAGGAAGTTTCTCAGTAGGGGGCTTAGCTGAGGGCATGTTCTTCTCAGAGACAAAGTaGTGTTCACCTTGCATTTTG +
Preference number: 4 (lower is better)
Translates to: RTILKGSFSVGGLAEGMFFSETK*CSPCIL
Trigger: CAAAATGCAAGGTGAACACCACTTTGTCTCTGAGAA...GAACATGCCCTCAGCTAAGCCCCCTACTGAGAAACTTCCTTTGAGAATTGTGCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR CCA 90 bp AGCACGTGCAAAATGATACCCAGTTTGAGGTTCCTCATCCTGCTACTATATTTACTCTTTCCTGGACAGTaGCAATATGGCGCCAGGATG +
Preference number: 4 (lower is better)
Translates to: STCKMIPSLRFLILLLYLLFPGQ*QYGARM
Trigger: CATCCTGGCGCCATATTGCCACTGTCCAGGAAAGAG...TAAATATAGTAGCAGGATGAGGAACCTCAAACTGGGTATCATTTTGCACGTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS-3UTR CCA 90 bp TGTGGAGGGCATATAGTTAGGAAAGAGAGAGAGAGAGAGAACAGGAACAGATGCATGGAAATGCGCAACTaGCCTGGAGGTAAATTTCTC +
Preference number: 4 (lower is better)
Translates to: CGGHIVRKERERENRNRCMEMRN*PGGKFL
Trigger: GAGAAATTTACCTCCAGGCCAGTTGCGCATTTCCAT...GCATCTGTTCCTGTTCTCTCTCTCTCTCTCTTTCCTAACTATATGCCCTCCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS-3UTR TCA 90 bp ACAATTCTCAAAGGAAGTTTCTCAGTAGGGGGCTTAGCTGAGGGCATGTTCTCTCTGCAGCTCCCTTCTTaGGAGAAAAATGACTATGTT +
Preference number: 4 (lower is better)
Translates to: TILKGSFSVGGLAEGMFSLQLPS*EKNDYV
Trigger: AACATAGTCATTTTTCTCTCAAGAAGGGAGCTGCAG...AGAGAACATGCCCTCAGCTAAGCCCCCTACTGAGAAACTTCCTTTGAGAATTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR TCA 90 bp AGTGGTGTTCACCTTGCATTTTGTGAAGTCGCACAATTCTCAAAGGAAGTTTCTAAGTCAATGTCTTGGTaGGTTGCCGCTGGGTTTGAG +
Preference number: 4 (lower is better)
Translates to: SGVHLAFCEVAQFSKEVSKSMSW*VAAGFE
Trigger: CTCAAACCCAGCGGCAACTCACCAAGACATTGACTT...AGAAACTTCCTTTGAGAATTGTGCGACTTCACAAAATGCAAGGTGAACACCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR TCA 90 bp CTGAAGAGTAGCAACTACTCCAGTGACCAGCAGAGCCAACACCTACGATTTTGGCATTCACACAGTTTGTaGCAACTTAATTGTCTACCT +
Preference number: 4 (lower is better)
Translates to: LKSSNYSSDQQSQHLRFWHSHSL*QLNCLP
Trigger: AGGTAGACAATTAAGTTGTCACAAACTGTGTGAATG...CCAAAATCGTAGGTGTTGGCTCTGCTGGTCACTGGAGTAGTTGCTACTCTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS-3UTR TCA 90 bp TGTGGAGGGCATATAGTTAGGAAAGAGAGAGAGAGAGAGAACAGGAACAGATGCCCAAAGAACCTTTTATaGTTCAGGGGCAATTTGGCA +
Preference number: 4 (lower is better)
Translates to: CGGHIVRKERERENRNRCPKNLL*FRGNLA
Trigger: TGCCAAATTGCCCCTGAATCATAAAAGGTTCTTTGG...GCATCTGTTCCTGTTCTCTCTCTCTCTCTCTTTCCTAACTATATGCCCTCCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS-3UTR GCA 90 bp AGAGTAGCAACTACTCCAGTGACCAGCAGAGCCAACACCTACGATTTTGGCAGCATTTTGTGGTTGGTCTaGCAATTCCCAATTATATTC +
Preference number: 4 (lower is better)
Translates to: RVATTPVTSRANTYDFGSILWLV*QFPIIF
Trigger: GAATATAATTGGGAATTGGCAGACCAACCACAAAAT...GCTGCCAAAATCGTAGGTGTTGGCTCTGCTGGTCACTGGAGTAGTTGCTACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR GCA 90 bp AGAGTAGCAACTACTCCAGTGACCAGCAGAGCCAACACCTACGATTTTGGCAGCAGAGTTGTTTGGCAATaGATCAAAATTTCCTCCAAA +
Preference number: 4 (lower is better)
Translates to: RVATTPVTSRANTYDFGSRVVWQ*IKISSK
Trigger: TTTGGAGGAAATTTTGATGCATTGCCAAACAACTCT...GCTGCCAAAATCGTAGGTGTTGGCTCTGCTGGTCACTGGAGTAGTTGCTACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR GCA 90 bp ACAATTCTCAAAGGAAGTTTCTCAGTAGGGGGCTTAGCTGAGGGCATGTTCTCTGAACAGAAGAGCACGTaGAAAATGATACCCAGTTTG +
Preference number: 4 (lower is better)
Translates to: TILKGSFSVGGLAEGMFSEQKST*KMIPSL
Trigger: CAAACTGGGTATCATTTTGCACGTGCTCTTCTGTTC...AGAGAACATGCCCTCAGCTAAGCCCCCTACTGAGAAACTTCCTTTGAGAATTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR GCA 90 bp AGAGTAGCAACTACTCCAGTGACCAGCAGAGCCAACACCTACGATTTTGGCAGCGTAGGAAGAACAGGTTaGCACATGTTTGTATATTTT +
Preference number: 4 (lower is better)
Translates to: RVATTPVTSRANTYDFGSVGRTG*HMFVYF
Trigger: AAAATATACAAACATGTGGCAACCTGTTCTTCCTAC...GCTGCCAAAATCGTAGGTGTTGGCTCTGCTGGTCACTGGAGTAGTTGCTACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR CCA 90 bp ATACTTGGATCATACACAAGTTTATATTTGGTAGGAAGAACAGGTTGCCACATGATCGCCAGAGCCCCCTaGCCAGCCAATGATTTCTCT +
Preference number: 4 (lower is better)
Translates to: ILGSYTSLYLVGRTGCHMIARAP*PANDFS
Trigger: AGAGAAATCATTGGCTGGCCAGGGGGCTCTGGCGAT...CATGTGGCAACCTGTTCTTCCTACCAAATATAAACTTGTGTATGATCCAAGTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR CCA 90 bp GAACAGAAGAGCACGTGCAAAATGATACCCAGTTTGAGGTTCCTCATCCTGCTATTTCTCCTTGACTTCTaGGAACATCTTAAAGCGTGC +
Preference number: 4 (lower is better)
Translates to: EQKSTCKMIPSLRFLILLFLLDF*EHLKAC
Trigger: GCACGCTTTAAGATGTTCCCAGAAGTCAAGGAGAAA...TAGCAGGATGAGGAACCTCAAACTGGGTATCATTTTGCACGTGCTCTTCTGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR CCA 90 bp CGCACAATTCTCAAAGGAAGTTTCTCAGTAGGGGGCTTAGCTGAGGGCATGTTCCAAACCCTTTCTGTTTaGCTTCAAGAATCCTTCTTT +
Preference number: 4 (lower is better)
Translates to: RTILKGSFSVGGLAEGMFQTLSV*LQESFF
Trigger: AAAGAAGGATTCTTGAAGCCAAACAGAAAGGGTTTG...GAACATGCCCTCAGCTAAGCCCCCTACTGAGAAACTTCCTTTGAGAATTGTGCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR CCA 90 bp AAGAGTAGCAACTACTCCAGTGACCAGCAGAGCCAACACCTACGATTTTGGCAGCAAACCCTTTCTGTTTaGCTTCAAGAATCCTTCTTT +
Preference number: 4 (lower is better)
Translates to: KSSNYSSDQQSQHLRFWQQTLSV*LQESFF
Trigger: AAAGAAGGATTCTTGAAGCCAAACAGAAAGGGTTTG...CTGCCAAAATCGTAGGTGTTGGCTCTGCTGGTCACTGGAGTAGTTGCTACTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR CCA 90 bp ATTCAGAAACACCAATTTGGGAACGGTAGTTTGGCACACCTAACTAATAAATACCGGTGGTTCCAGCTGTaGCACTCACGAGGAAAGGAA +
Preference number: 4 (lower is better)
Translates to: IQKHQFGNGSLAHLTNKYRWFQL*HSRGKE
Trigger: TTCCTTTCCTCGTGAGTGCCACAGCTGGAACCACCG...GTATTTATTAGTTAGGTGTGCCAAACTACCGTTCCCAAATTGGTGTTTCTGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR CCA 90 bp ACAATTCTCAAAGGAAGTTTCTCAGTAGGGGGCTTAGCTGAGGGCATGTTCTCTCCAACTTTAATTTTCTaGGCTCACCACATTCTGGGA +
Preference number: 4 (lower is better)
Translates to: TILKGSFSVGGLAEGMFSPTLIF*AHHILG
Trigger: TCCCAGAATGTGGTGAGCCCAGAAAATTAAAGTTGG...AGAGAACATGCCCTCAGCTAAGCCCCCTACTGAGAAACTTCCTTTGAGAATTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS-3UTR CCA 90 bp AATGCCTCAAAATCTAGGGTGAGAGGCTCATTTCATGGAAGAAAAACAACCACCTGGACAGTGGCAATATaGCGCCAGGATGATGTCATT +
Preference number: 4 (lower is better)
Translates to: NASKSRVRGSFHGRKTTTWTVAI*RQDDVI
Trigger: AATGACATCATCCTGGCGCCATATTGCCACTGTCCA...GGTGGTTGTTTTTCTTCCATGAAATGAGCCTCTCACCCTAGATTTTGAGGCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS-3UTR CCA 90 bp TATAATCTAGGATCTGTAACTCAAAAGATAAAGCATCCTGGAGTACAGCAGGGTAATTTGAAGGAGTACTaGGAAGGGGTAGGGGAGCGG +
Preference number: 4 (lower is better)
Translates to: YNLGSVTQKIKHPGVQQGNLKEY*EGVGER
Trigger: CCGCTCCCCTACCCCTTCCCAGTACTCCTTCAAATT...ACCCTGCTGTACTCCAGGATGCTTTATCTTTTGAGTTACAGATCCTAGATTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376261.8
3UTR CAA 72 bp GAAAAACAACCACCCATGGAATATAAAGTAACTATTTaGGGTCCCAGTGGTAGGGAGTCTAGTGGGAGAGAC +
Preference number: 4 (lower is better)
Translates to: EKQPPMEYKVTI*GPSGRESSGRD
Trigger: GTCTCTCCCACTAGACTCCCTACCACTGGGACCCAAAATAGTTACTTTATATTCCATGGGTGGTTGTTTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376261.8
3UTR CAA 72 bp ATTTCTCTATGTTATATTGTAGGGCATTTCTACCCGTaGAAGGGCAGGGCCTTCTCTCTTCCCTTGTATACC +
Preference number: 4 (lower is better)
Translates to: ISLCYIVGHFYP*KGRAFSLPLYT
Trigger: GGTATACAAGGGAAGAGAGAAGGCCCTGCCCTTCAACGGGTAGAAATGCCCTACAATATAACATAGAGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS-3UTR TCA 90 bp TACACCTGTGCCTTCTTTGTCCATATTCTGAAGAGTAGCAACTACTCCAGTGACCTGCAGCTCCCTTCTTaGGAGAAAAATGACTATGTT +
Preference number: 4 (lower is better)
Translates to: YTCAFFVHILKSSNYSSDLQLPS*EKNDYV
Trigger: AACATAGTCATTTTTCTCTCAAGAAGGGAGCTGCAG...GTCACTGGAGTAGTTGCTACTCTTCAGAATATGGACAAAGAAGGCACAGGTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR TCA 90 bp ACAATTCTCAAAGGAAGTTTCTCAGTAGGGGGCTTAGCTGAGGGCATGTTCTCTTCTTTGTCCATATTCTaGAGAGTAGCAACTACTCCA +
Preference number: 4 (lower is better)
Translates to: TILKGSFSVGGLAEGMFSSLSIF*RVATTP
Trigger: TGGAGTAGTTGCTACTCTTCAGAATATGGACAAAGA...AGAGAACATGCCCTCAGCTAAGCCCCCTACTGAGAAACTTCCTTTGAGAATTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR GCA 90 bp ATACTTGGATCATACACAAGTTTATATTTGGTAGGAAGAACAGGTTGCCACATGCGGCAGCAGGTCTGTTaGATGGAGAAACGCGTAGTT +
Preference number: 4 (lower is better)
Translates to: ILGSYTSLYLVGRTGCHMRQQVC*MEKRVV
Trigger: AACTACGCGTTTCTCCATGCAACAGACCTGCTGCCG...CATGTGGCAACCTGTTCTTCCTACCAAATATAAACTTGTGTATGATCCAAGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR GCA 90 bp TTCTCAGTAGGGGGCTTAGCTGAGGGCATGTTCTCTAGAGAAGTGGAACAGCTTAGATCTTATACTTTTTaGAAATGTCAGCGACAGCTA +
Preference number: 4 (lower is better)
Translates to: FSVGGLAEGMFSREVEQLRSYTF*KCQRQL
Trigger: TAGCTGTCGCTGACATTTGCAAAAAGTATAAGATCT...AAGCTGTTCCACTTCTCTAGAGAACATGCCCTCAGCTAAGCCCCCTACTGAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000259271.7
ENST00000648567.1
CDS-3UTR GCA 90 bp CACATAAAGACCATGGCACTGGGAATTTGGGCTAATATTAAAAATAATCTCCCTAGGAGAGCAGAGCACTaGAAAGGGACTCCCATCATC +
Preference number: 4 (lower is better)
Translates to: HIKTMALGIWANIKNNLPRRAEH*KGTPII
Trigger: GATGATGGGAGTCCCTTTGCAGTGCTCTGCTCTCCT...AGGGAGATTATTTTTAATATTAGCCCAAATTCCCAGTGCCATGGTCTTTATGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS-3UTR GCA 90 bp ACCTTGCATTTTGTGAAGTCGCACAATTCTCAAAGGAAGTTTCTCAGTAGGGGGAGGCATGCATTTGGTTaGAATTCTGCATCAATCCCT +
Preference number: 4 (lower is better)
Translates to: TLHFVKSHNSQRKFLSRGRHAFG*NSASIP
Trigger: AGGGATTGATGCAGAATTGCAACCAAATGCATGCCT...CCCCCTACTGAGAAACTTCCTTTGAGAATTGTGCGACTTCACAAAATGCAAGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR GCA 90 bp TTCTCAGTAGGGGGCTTAGCTGAGGGCATGTTCTCTAGAGAAGTGGAACAGCTTCTATATTTACACCTGTaGCTTCTTTGTCCATATTCT +
Preference number: 4 (lower is better)
Translates to: FSVGGLAEGMFSREVEQLLYLHL*LLCPYS
Trigger: AGAATATGGACAAAGAAGGCACAGGTGTAAATATAG...AAGCTGTTCCACTTCTCTAGAGAACATGCCCTCAGCTAAGCCCCCTACTGAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000259271.7
ENST00000648567.1
CDS-3UTR GCA 90 bp GCTCCGGATAGTCGGGCAGCTATGTGCTTATTCTCAGCAGGCAGTTTTGAGAAAGGAAGAGAATCTTACTaGCAATGGGATCAATTATTT +
Preference number: 4 (lower is better)
Translates to: APDSRAAMCLFSAGSFEKGRESY*QWDQLF
Trigger: AAATAATTGATCCCATTGGCAGTAAGATTCTCTTCC...TTTCTCAAAACTGCCTGCTGAGAATAAGCACATAGCTGCCCGACTATCCGGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS-3UTR GCA 90 bp AAGGGGAAGAGAATCTTACTGCCAATGGGATCAATTATTTTAAAGAACTCGCAGCTGGTTTGTCACGCTTaGAGAGTGAGTCCGCTAAGA +
Preference number: 4 (lower is better)
Translates to: KGKRILLPMGSIILKNSQLVCHA*RVSPLR
Trigger: TCTTAGCGGACTCACTCTGCAAGCGTGACAAACCAG...CTGCGAGTTCTTTAAAATAATTGATCCCATTGGCAGTAAGATTCTCTTCCCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS-3UTR CCA 90 bp ACCTTGCATTTTGTGAAGTCGCACAATTCTCAAAGGAAGTTTCTCAGTAGGGGGTTCCTCCAAATTTTGTaGTTGGTCTGCCAATTCCCA +
Preference number: 4 (lower is better)
Translates to: TLHFVKSHNSQRKFLSRGFLQIL*LVCQFP
Trigger: TGGGAATTGGCAGACCAACCACAAAATTTGGAGGAA...CCCCCTACTGAGAAACTTCCTTTGAGAATTGTGCGACTTCACAAAATGCAAGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR CCA 90 bp CTGAAGAGTAGCAACTACTCCAGTGACCAGCAGAGCCAACACCTACGATTTTGGCAAAAGCACAAATACTaGAGCAATTTCATAGGTGAA +
Preference number: 4 (lower is better)
Translates to: LKSSNYSSDQQSQHLRFWQKHKY*SNFIGE
Trigger: TTCACCTATGAAATTGCTCCAGTATTTGTGCTTTTG...CCAAAATCGTAGGTGTTGGCTCTGCTGGTCACTGGAGTAGTTGCTACTCTTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR CCA 90 bp AGTGGTGTTCACCTTGCATTTTGTGAAGTCGCACAATTCTCAAAGGAAGTTTCTTTAAAAACATCAACGTaGCGTCCGCACTGTAAGGCC +
Preference number: 4 (lower is better)
Translates to: SGVHLAFCEVAQFSKEVSLKTST*RPHCKA
Trigger: GGCCTTACAGTGCGGACGCCACGTTGATGTTTTTAA...AGAAACTTCCTTTGAGAATTGTGCGACTTCACAAAATGCAAGGTGAACACCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR CCA 90 bp CACGTGCAAAATGATACCCAGTTTGAGGTTCCTCATCCTGCTACTATATTTACATTAAAAACATCAACGTaGCGTCCGCACTGTAAGGCC +
Preference number: 4 (lower is better)
Translates to: HVQNDTQFEVPHPATIFTLKTST*RPHCKA
Trigger: GGCCTTACAGTGCGGACGCCACGTTGATGTTTTTAA...TGTAAATATAGTAGCAGGATGAGGAACCTCAAACTGGGTATCATTTTGCACGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR CCA 90 bp GATAATGCCTCAAAATCTAGGGTGAGAGGCTCATTTCATGGAAGAAAAACAACCCAGAGTACGCAAGCTTaGAGGAATGTACCAGAAGCA +
Preference number: 4 (lower is better)
Translates to: DNASKSRVRGSFHGRKTTQSTQA*RNVPEA
Trigger: TGCTTCTGGTACATTCCTCCAAGCTTGCGTACTCTG...GGTTGTTTTTCTTCCATGAAATGAGCCTCTCACCCTAGATTTTGAGGCATTATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS-3UTR CCA 90 bp ATTGGTAACGTCTGTTCTCAGAGACAAAGTGGTGTTCACCTTGCATTTTGTGAACAGAGTACGCAAGCTTaGAGGAATGTACCAGAAGCA +
Preference number: 4 (lower is better)
Translates to: IGNVCSQRQSGVHLAFCEQSTQA*RNVPEA
Trigger: TGCTTCTGGTACATTCCTCCAAGCTTGCGTACTCTG...TTCACAAAATGCAAGGTGAACACCACTTTGTCTCTGAGAACAGACGTTACCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR CCA 90 bp ATACTTGGATCATACACAAGTTTATATTTGGTAGGAAGAACAGGTTGCCACATGTCTGGCTTTAATCACTaGAGCCACCTTCGAGAGGCG +
Preference number: 4 (lower is better)
Translates to: ILGSYTSLYLVGRTGCHMSGFNH*SHLREA
Trigger: CGCCTCTCGAAGGTGGCTCCAGTGATTAAAGCCAGA...CATGTGGCAACCTGTTCTTCCTACCAAATATAAACTTGTGTATGATCCAAGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR CCA 90 bp TACTATATTTACACCTGTGCCTTCTTTGTCCATATTCTGAAGAGTAGCAACTACGGGCTCACCACATTCTaGGAGTGTGCTTCATTCCTC +
Preference number: 4 (lower is better)
Translates to: YYIYTCAFFVHILKSSNYGLTTF*ECASFL
Trigger: GAGGAATGAAGCACACTCCCAGAATGTGGTGAGCCC...GTAGTTGCTACTCTTCAGAATATGGACAAAGAAGGCACAGGTGTAAATATAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS-3UTR CCA 90 bp AAGAGTAGCAACTACTCCAGTGACCAGCAGAGCCAACACCTACGATTTTGGCAGCCCCATAAATATCTATaGAAGCTTTTGTTAGCTCAT +
Preference number: 4 (lower is better)
Translates to: KSSNYSSDQQSQHLRFWQPHKYL*KLLLAH
Trigger: ATGAGCTAACAAAAGCTTCCATAGATATTTATGGGG...CTGCCAAAATCGTAGGTGTTGGCTCTGCTGGTCACTGGAGTAGTTGCTACTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS-3UTR CCA 90 bp CTGAAGAGTAGCAACTACTCCAGTGACCAGCAGAGCCAACACCTACGATTTTGGTGGTCCATTCAGAAATaGAGAATGTTCCTAAATTTG +
Preference number: 4 (lower is better)
Translates to: LKSSNYSSDQQSQHLRFWWSIQK*RMFLNL
Trigger: CAAATTTAGGAACATTCTCCATTTCTGAATGGACCA...CCAAAATCGTAGGTGTTGGCTCTGCTGGTCACTGGAGTAGTTGCTACTCTTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS-3UTR CCA 90 bp TGTGGAGGGCATATAGTTAGGAAAGAGAGAGAGAGAGAGAACAGGAACAGATGCTTTCCTCACATCCTGTaGCAGTATATGAAGTCCATA +
Preference number: 4 (lower is better)
Translates to: CGGHIVRKERERENRNRCFPHIL*QYMKSI
Trigger: TATGGACTTCATATACTGCCACAGGATGTGAGGAAA...GCATCTGTTCCTGTTCTCTCTCTCTCTCTCTTTCCTAACTATATGCCCTCCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376261.8
3UTR CAA 72 bp GTAACGTCTGTTCTCAGAGACAAAGTGGTGTTCACCTaGCATTTTGTGAAGTCGCACAATTCTCAAAGGAAG +
Preference number: 4 (lower is better)
Translates to: VTSVLRDKVVFT*HFVKSHNSQRK
Trigger: CTTCCTTTGAGAATTGTGCGACTTCACAAAATGCAAGGTGAACACCACTTTGTCTCTGAGAACAGACGTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
3UTR CAA 72 bp GGCTCACCACATTCTGGGAGTGTGCTTCATTCCTCTTaGCTCAGGCTGATAAGGTTTTATTTTTACTTTCTC +
Preference number: 4 (lower is better)
Translates to: GSPHSGSVLHSS*LRLIRFYFYFL
Trigger: GAGAAAGTAAAAATAAAACCTTATCAGCCTGAGCAAAGAGGAATGAAGCACACTCCCAGAATGTGGTGAGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376261.8
3UTR CAA 72 bp GTCGGGCAGCTATGTGCTTATTCTCAGCAGGCAGTTTaGAGAAAGGAACTGCTTTCTAATGCTTTGTCTAAT +
Preference number: 4 (lower is better)
Translates to: VGQLCAYSQQAV*RKELLSNALSN
Trigger: ATTAGACAAAGCATTAGAAAGCAGTTCCTTTCTCAAAACTGCCTGCTGAGAATAAGCACATAGCTGCCCGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS-3UTR TCA 90 bp ATTCAGAAACACCAATTTGGGAACGGTAGTTTGGCACACCTAACTAATAAATACCCAAGGGTTGGTAGCTaGCCATTGTGGTTCCATACT +
Preference number: 4 (lower is better)
Translates to: IQKHQFGNGSLAHLTNKYPRVGS*PLWFHT
Trigger: AGTATGGAACCACAATGGTCAGCTACCAACCCTTGG...GTATTTATTAGTTAGGTGTGCCAAACTACCGTTCCCAAATTGGTGTTTCTGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR TCA 90 bp ATACTTGGATCATACACAAGTTTATATTTGGTAGGAAGAACAGGTTGCCACATGCCATGCGGAAGAAATTaGCCTTGTCTCCCAAGGGTT +
Preference number: 4 (lower is better)
Translates to: ILGSYTSLYLVGRTGCHMPCGRN*PCLPRV
Trigger: AACCCTTGGGAGACAAGGTCAATTTCTTCCGCATGG...CATGTGGCAACCTGTTCTTCCTACCAAATATAAACTTGTGTATGATCCAAGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR TCA 90 bp ATTCAGAAACACCAATTTGGGAACGGTAGTTTGGCACACCTAACTAATAAATACCCATGCGGAAGAAATTaGCCTTGTCTCCCAAGGGTT +
Preference number: 4 (lower is better)
Translates to: IQKHQFGNGSLAHLTNKYPCGRN*PCLPRV
Trigger: AACCCTTGGGAGACAAGGTCAATTTCTTCCGCATGG...GTATTTATTAGTTAGGTGTGCCAAACTACCGTTCCCAAATTGGTGTTTCTGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR TCA 90 bp GATAATGCCTCAAAATCTAGGGTGAGAGGCTCATTTCATGGAAGAAAAACAACCAATATGGCGCCAGGATaGTGTCATTATTGTCCCACA +
Preference number: 4 (lower is better)
Translates to: DNASKSRVRGSFHGRKTTNMAPG*CHYCPT
Trigger: TGTGGGACAATAATGACATCATCCTGGCGCCATATT...GGTTGTTTTTCTTCCATGAAATGAGCCTCTCACCCTAGATTTTGAGGCATTATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS-3UTR TCA 90 bp CACATAAAGACCATGGCACTGGGAATTTGGGCTAATATTAAAAATAATCTCCCTCTGCAGTCTGAGTACTaGACTACCTGGTCCATTCAG +
Preference number: 4 (lower is better)
Translates to: HIKTMALGIWANIKNNLPLQSEY*TTWSIQ
Trigger: CTGAATGGACCAGGTAGTTCAGTACTCAGACTGCAG...AGGGAGATTATTTTTAATATTAGCCCAAATTCCCAGTGCCATGGTCTTTATGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS-3UTR TCA 90 bp AAGGGGAAGAGAATCTTACTGCCAATGGGATCAATTATTTTAAAGAACTCGCAGTGTATACCTGCAGTCTaGGTACTGAACTACCTGGTC +
Preference number: 4 (lower is better)
Translates to: KGKRILLPMGSIILKNSQCIPAV*VLNYLV
Trigger: GACCAGGTAGTTCAGTACTCAGACTGCAGGTATACA...CTGCGAGTTCTTTAAAATAATTGATCCCATTGGCAGTAAGATTCTCTTCCCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS-3UTR TCA 90 bp TATAATCTAGGATCTGTAACTCAAAAGATAAAGCATCCTGGAGTACAGCAGGGTTCCCTTACTCTCTTCTaGCCTGATTCCACATCTCCT +
Preference number: 4 (lower is better)
Translates to: YNLGSVTQKIKHPGVQQGSLTLF*PDSTSP
Trigger: AGGAGATGTGGAATCAGGTCAGAAGAGAGTAAGGGA...ACCCTGCTGTACTCCAGGATGCTTTATCTTTTGAGTTACAGATCCTAGATTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS-3UTR CCA 90 bp TTTCTTTCCTCACATCCTGTGGCAGTATATGAAGTCCATACCATGTATAGGTCTTCTCCAATCAGCACTTaGAATCTGACGATGTGTGAC +
Preference number: 4 (lower is better)
Translates to: FLSSHPVAVYEVHTMYRSSPIST*NLTMCD
Trigger: GTCACACATCGTCAGATTCCAAGTGCTGATTGGAGA...AGACCTATACATGGTATGGACTTCATATACTGCCACAGGATGTGAGGAAAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS-3UTR TCA 90 bp TACACCTGTGCCTTCTTTGTCCATATTCTGAAGAGTAGCAACTACTCCAGTGACAAACCAGTAGAAAGTTaGTTGAAGTATCTAGGATGC +
Preference number: 4 (lower is better)
Translates to: YTCAFFVHILKSSNYSSDKPVES*LKYLGC
Trigger: GCATCCTAGATACTTCAATCAACTTTCTACTGGTTT...GTCACTGGAGTAGTTGCTACTCTTCAGAATATGGACAAAGAAGGCACAGGTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR TCA 90 bp AGTGGTGTTCACCTTGCATTTTGTGAAGTCGCACAATTCTCAAAGGAAGTTTCTCTGCAGCTCCCTTCTTaGGAGAAAAATGACTATGTT +
Preference number: 4 (lower is better)
Translates to: SGVHLAFCEVAQFSKEVSLQLPS*EKNDYV
Trigger: AACATAGTCATTTTTCTCTCAAGAAGGGAGCTGCAG...AGAAACTTCCTTTGAGAATTGTGCGACTTCACAAAATGCAAGGTGAACACCACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR TCA 90 bp AGCACGTGCAAAATGATACCCAGTTTGAGGTTCCTCATCCTGCTACTATATTTATTTGCATTTAGCATTTaGGAACAGAAGAGCACGTGC +
Preference number: 4 (lower is better)
Translates to: STCKMIPSLRFLILLLYLFAFSI*EQKSTC
Trigger: GCACGTGCTCTTCTGTTCTCAAATGCTAAATGCAAA...TAAATATAGTAGCAGGATGAGGAACCTCAAACTGGGTATCATTTTGCACGTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR TCA 90 bp AGGTTCCTCATCCTGCTACTATATTTACACCTGTGCCTTCTTTGTCCATATTCTGAATCTGACGATGTGTaGCCCCATAAATATCTATGG +
Preference number: 4 (lower is better)
Translates to: RFLILLLYLHLCLLCPYSESDDV*PHKYLW
Trigger: CCATAGATATTTATGGGGTCACACATCGTCAGATTC...AGAATATGGACAAAGAAGGCACAGGTGTAAATATAGTAGCAGGATGAGGAACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS-3UTR TCA 90 bp AACCCATTTGTTTTTCTAGACAGAAAGGGCCCAAAGCCATGTTCATATCAAGTTAAGGTTACTCCTTCATaGAATTCTGCGGGACAGATG +
Preference number: 4 (lower is better)
Translates to: NPFVFLDRKGPKPCSYQVKVTPS*NSAGQM
Trigger: CATCTGTCCCGCAGAATTTCATGAAGGAGTAACCTT...AACTTGATATGAACATGGCTTTGGGCCCTTTCTGTCTAGAAAAACAAATGGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS-3UTR TCA 90 bp TTTCTTTCCTCACATCCTGTGGCAGTATATGAAGTCCATACCATGTATAGGTCTTACTCTCTTCTGACCTaGTTCCACATCTCCTTTCAA +
Preference number: 4 (lower is better)
Translates to: FLSSHPVAVYEVHTMYRSYSLLT*FHISFQ
Trigger: TTGAAAGGAGATGTGGAATCAGGTCAGAAGAGAGTA...AGACCTATACATGGTATGGACTTCATATACTGCCACAGGATGTGAGGAAAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS-3UTR GCA 90 bp ACCTTGCATTTTGTGAAGTCGCACAATTCTCAAAGGAAGTTTCTCAGTAGGGGGATTTGGTTGCAATTCTaGATCAATCCCTCTTCTCTA +
Preference number: 4 (lower is better)
Translates to: TLHFVKSHNSQRKFLSRGIWLQF*INPSSL
Trigger: TAGAGAAGAGGGATTGATGCAGAATTGCAACCAAAT...CCCCCTACTGAGAAACTTCCTTTGAGAATTGTGCGACTTCACAAAATGCAAGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR CCA 90 bp ATACTTGGATCATACACAAGTTTATATTTGGTAGGAAGAACAGGTTGCCACATGCAACACCTACGATTTTaGCAGCTGGTGACACTCCAT +
Preference number: 4 (lower is better)
Translates to: ILGSYTSLYLVGRTGCHMQHLRF*QLVTLH
Trigger: ATGGAGTGTCACCAGCTGCCAAAATCGTAGGTGTTG...CATGTGGCAACCTGTTCTTCCTACCAAATATAAACTTGTGTATGATCCAAGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR CCA 90 bp GATAATGCCTCAAAATCTAGGGTGAGAGGCTCATTTCATGGAAGAAAAACAACCAAAGATAAAGCATCCTaGAGTACAGCAGGGTTGGTT +
Preference number: 4 (lower is better)
Translates to: DNASKSRVRGSFHGRKTTKDKAS*STAGLV
Trigger: AACCAACCCTGCTGTACTCCAGGATGCTTTATCTTT...GGTTGTTTTTCTTCCATGAAATGAGCCTCTCACCCTAGATTTTGAGGCATTATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS-3UTR TCA 90 bp CACATAAAGACCATGGCACTGGGAATTTGGGCTAATATTAAAAATAATCTCCCTGATTTTGGCAGCTGGTaGCACTCCATAATTGGTAAC +
Preference number: 4 (lower is better)
Translates to: HIKTMALGIWANIKNNLPDFGSW*HSIIGN
Trigger: GTTACCAATTATGGAGTGTCACCAGCTGCCAAAATC...AGGGAGATTATTTTTAATATTAGCCCAAATTCCCAGTGCCATGGTCTTTATGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS-3UTR TCA 90 bp CACGTGCAAAATGATACCCAGTTTGAGGTTCCTCATCCTGCTACTATATTTACATCTTTGTCCATATTCTaGAGAGTAGCAACTACTCCA +
Preference number: 4 (lower is better)
Translates to: HVQNDTQFEVPHPATIFTSLSIF*RVATTP
Trigger: TGGAGTAGTTGCTACTCTTCAGAATATGGACAAAGA...TGTAAATATAGTAGCAGGATGAGGAACCTCAAACTGGGTATCATTTTGCACGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR TCA 90 bp AGCACGTGCAAAATGATACCCAGTTTGAGGTTCCTCATCCTGCTACTATATTTATCTTTGTCCATATTCTaGAGAGTAGCAACTACTCCA +
Preference number: 4 (lower is better)
Translates to: STCKMIPSLRFLILLLYLSLSIF*RVATTP
Trigger: TGGAGTAGTTGCTACTCTTCAGAATATGGACAAAGA...TAAATATAGTAGCAGGATGAGGAACCTCAAACTGGGTATCATTTTGCACGTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR TCA 90 bp ATACTTGGATCATACACAAGTTTATATTTGGTAGGAAGAACAGGTTGCCACATGCCTCAAAATCTAGGGTaGGAGGCTCATTTCATGGAA +
Preference number: 4 (lower is better)
Translates to: ILGSYTSLYLVGRTGCHMPQNLG*EAHFME
Trigger: TTCCATGAAATGAGCCTCTCACCCTAGATTTTGAGG...CATGTGGCAACCTGTTCTTCCTACCAAATATAAACTTGTGTATGATCCAAGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS-3UTR GCA 90 bp TACACCTGTGCCTTCTTTGTCCATATTCTGAAGAGTAGCAACTACTCCAGTGACATTTTGTGGTTGGTCTaGCAATTCCCAATTATATTC +
Preference number: 4 (lower is better)
Translates to: YTCAFFVHILKSSNYSSDILWLV*QFPIIF
Trigger: GAATATAATTGGGAATTGGCAGACCAACCACAAAAT...GTCACTGGAGTAGTTGCTACTCTTCAGAATATGGACAAAGAAGGCACAGGTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR GCA 90 bp GATAATGCCTCAAAATCTAGGGTGAGAGGCTCATTTCATGGAAGAAAAACAACCGAACATCTTAAAGCGTaGGATCATCATGGCATACAT +
Preference number: 4 (lower is better)
Translates to: DNASKSRVRGSFHGRKTTEHLKA*DHHGIH
Trigger: ATGTATGCCATGATGATCGCACGCTTTAAGATGTTC...GGTTGTTTTTCTTCCATGAAATGAGCCTCTCACCCTAGATTTTGAGGCATTATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS-3UTR GCA 90 bp TACACCTGTGCCTTCTTTGTCCATATTCTGAAGAGTAGCAACTACTCCAGTGACAGATCTTATACTTTTTaGAAATGTCAGCGACAGCTA +
Preference number: 4 (lower is better)
Translates to: YTCAFFVHILKSSNYSSDRSYTF*KCQRQL
Trigger: TAGCTGTCGCTGACATTTGCAAAAAGTATAAGATCT...GTCACTGGAGTAGTTGCTACTCTTCAGAATATGGACAAAGAAGGCACAGGTGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR GCA 90 bp AGCACGTGCAAAATGATACCCAGTTTGAGGTTCCTCATCCTGCTACTATATTTACAAGCTGCATCCACATaGATCCAGATCTTATACTTT +
Preference number: 4 (lower is better)
Translates to: STCKMIPSLRFLILLLYLQAAST*IQILYF
Trigger: AAAGTATAAGATCTGGATGCATGTGGATGCAGCTTG...TAAATATAGTAGCAGGATGAGGAACCTCAAACTGGGTATCATTTTGCACGTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR GCA 90 bp AGGTTCCTCATCCTGCTACTATATTTACACCTGTGCCTTCTTTGTCCATATTCTCAAGCTGCATCCACATaGATCCAGATCTTATACTTT +
Preference number: 4 (lower is better)
Translates to: RFLILLLYLHLCLLCPYSQAAST*IQILYF
Trigger: AAAGTATAAGATCTGGATGCATGTGGATGCAGCTTG...AGAATATGGACAAAGAAGGCACAGGTGTAAATATAGTAGCAGGATGAGGAACCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR GCA 90 bp CACGTGCAAAATGATACCCAGTTTGAGGTTCCTCATCCTGCTACTATATTTACACAAGCTGCATCCACATaGATCCAGATCTTATACTTT +
Preference number: 4 (lower is better)
Translates to: HVQNDTQFEVPHPATIFTQAAST*IQILYF
Trigger: AAAGTATAAGATCTGGATGCATGTGGATGCAGCTTG...TGTAAATATAGTAGCAGGATGAGGAACCTCAAACTGGGTATCATTTTGCACGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR GCA 90 bp ACCTTGCATTTTGTGAAGTCGCACAATTCTCAAAGGAAGTTTCTCAGTAGGGGGCTATATTTACACCTGTaGCTTCTTTGTCCATATTCT +
Preference number: 4 (lower is better)
Translates to: TLHFVKSHNSQRKFLSRGLYLHL*LLCPYS
Trigger: AGAATATGGACAAAGAAGGCACAGGTGTAAATATAG...CCCCCTACTGAGAAACTTCCTTTGAGAATTGTGCGACTTCACAAAATGCAAGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR GCA 90 bp TACACCTGTGCCTTCTTTGTCCATATTCTGAAGAGTAGCAACTACTCCAGTGACGTAGGAAGAACAGGTTaGCACATGTTTGTATATTTT +
Preference number: 4 (lower is better)
Translates to: YTCAFFVHILKSSNYSSDVGRTG*HMFVYF
Trigger: AAAATATACAAACATGTGGCAACCTGTTCTTCCTAC...GTCACTGGAGTAGTTGCTACTCTTCAGAATATGGACAAAGAAGGCACAGGTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR GCA 90 bp AACCCATTTGTTTTTCTAGACAGAAAGGGCCCAAAGCCATGTTCATATCAAGTTCTTCCCTTGTATACCTaGAGTCTGAGTACTGAACTA +
Preference number: 4 (lower is better)
Translates to: NPFVFLDRKGPKPCSYQVLPLYT*SLSTEL
Trigger: TAGTTCAGTACTCAGACTGCAGGTATACAAGGGAAG...AACTTGATATGAACATGGCTTTGGGCCCTTTCTGTCTAGAAAAACAAATGGGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS-3UTR CCA 90 bp TACACCTGTGCCTTCTTTGTCCATATTCTGAAGAGTAGCAACTACTCCAGTGACCAAAAGCACAAATACTaGAGCAATTTCATAGGTGAA +
Preference number: 4 (lower is better)
Translates to: YTCAFFVHILKSSNYSSDQKHKY*SNFIGE
Trigger: TTCACCTATGAAATTGCTCCAGTATTTGTGCTTTTG...GTCACTGGAGTAGTTGCTACTCTTCAGAATATGGACAAAGAAGGCACAGGTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR CCA 90 bp AATACTTGGATCATACACAAGTTTATATTTGGTAGGAAGAACAGGTTGCCACATCAGAGTACGCAAGCTTaGAGGAATGTACCAGAAGCA +
Preference number: 4 (lower is better)
Translates to: NTWIIHKFIFGRKNRLPHQSTQA*RNVPEA
Trigger: TGCTTCTGGTACATTCCTCCAAGCTTGCGTACTCTG...ATGTGGCAACCTGTTCTTCCTACCAAATATAAACTTGTGTATGATCCAAGTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR CCA 90 bp TACTATATTTACACCTGTGCCTTCTTTGTCCATATTCTGAAGAGTAGCAACTACTGTTCTCTAGAGAAGTaGAACAGCTTGGTGAGCAAG +
Preference number: 4 (lower is better)
Translates to: YYIYTCAFFVHILKSSNYCSLEK*NSLVSK
Trigger: CTTGCTCACCAAGCTGTTCCACTTCTCTAGAGAACA...GTAGTTGCTACTCTTCAGAATATGGACAAAGAAGGCACAGGTGTAAATATAGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259271.7
ENST00000648567.1
CDS-3UTR CCA 90 bp AATACTTGGATCATACACAAGTTTATATTTGGTAGGAAGAACAGGTTGCCACATCAACACCTACGATTTTaGCAGCTGGTGACACTCCAT +
Preference number: 4 (lower is better)
Translates to: NTWIIHKFIFGRKNRLPHQHLRF*QLVTLH
Trigger: ATGGAGTGTCACCAGCTGCCAAAATCGTAGGTGTTG...ATGTGGCAACCTGTTCTTCCTACCAAATATAAACTTGTGTATGATCCAAGTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR CCA 90 bp TATAATCTAGGATCTGTAACTCAAAAGATAAAGCATCCTGGAGTACAGCAGGGTGAGAGGCTCATTTCATaGAAGAAAAACAACCACCCA +
Preference number: 4 (lower is better)
Translates to: YNLGSVTQKIKHPGVQQGERLIS*KKNNHP
Trigger: TGGGTGGTTGTTTTTCTTCCATGAAATGAGCCTCTC...ACCCTGCTGTACTCCAGGATGCTTTATCTTTTGAGTTACAGATCCTAGATTATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376261.8
3UTR CAA 72 bp GGGAGCGGGGAAGAAGAGCTATTGTTGTTGCTAGAATaGTTTTGCTGGAATTTCATATATAGGCACAAATTG +
Preference number: 4 (lower is better)
Translates to: GSGEEELLLLLE*FCWNFIYRHKL
Trigger: CAATTTGTGCCTATATATGAAATTCCAGCAAAACAATTCTAGCAACAACAATAGCTCTTCTTCCCCGCTCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS-3UTR TCA 90 bp CACATAAAGACCATGGCACTGGGAATTTGGGCTAATATTAAAAATAATCTCCCTTTTGCATTTAGCATTTaGGAACAGAAGAGCACGTGC +
Preference number: 4 (lower is better)
Translates to: HIKTMALGIWANIKNNLPFAFSI*EQKSTC
Trigger: GCACGTGCTCTTCTGTTCTCAAATGCTAAATGCAAA...AGGGAGATTATTTTTAATATTAGCCCAAATTCCCAGTGCCATGGTCTTTATGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS-3UTR TCA 90 bp AGGTTCCTCATCCTGCTACTATATTTACACCTGTGCCTTCTTTGTCCATATTCTTCAGTCCTACTAGTCTaGAGTGAAAATAAAGTTTGC +
Preference number: 4 (lower is better)
Translates to: RFLILLLYLHLCLLCPYSSVLLV*SENKVC
Trigger: GCAAACTTTATTTTCACTTCAGACTAGTAGGACTGA...AGAATATGGACAAAGAAGGCACAGGTGTAAATATAGTAGCAGGATGAGGAACCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS-3UTR TCA 90 bp AATACTTGGATCATACACAAGTTTATATTTGGTAGGAAGAACAGGTTGCCACATAACCCCAATCTGAGGTaGCAAGACAGTATTATCCAG +
Preference number: 4 (lower is better)
Translates to: NTWIIHKFIFGRKNRLPHNPNLR*QDSIIQ
Trigger: CTGGATAATACTGTCTTGTCACCTCAGATTGGGGTT...ATGTGGCAACCTGTTCTTCCTACCAAATATAAACTTGTGTATGATCCAAGTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS-3UTR GCA 90 bp CACGTGCAAAATGATACCCAGTTTGAGGTTCCTCATCCTGCTACTATATTTACAATTTGGTTGCAATTCTaGATCAATCCCTCTTCTCTA +
Preference number: 4 (lower is better)
Translates to: HVQNDTQFEVPHPATIFTIWLQF*INPSSL
Trigger: TAGAGAAGAGGGATTGATGCAGAATTGCAACCAAAT...TGTAAATATAGTAGCAGGATGAGGAACCTCAAACTGGGTATCATTTTGCACGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR CCA 90 bp AGCACGTGCAAAATGATACCCAGTTTGAGGTTCCTCATCCTGCTACTATATTTATATTTCTGCATATTCTaGTCACTTTGGATCTCGATG +
Preference number: 4 (lower is better)
Translates to: STCKMIPSLRFLILLLYLYFCIF*SLWISM
Trigger: CATCGAGATCCAAAGTGACCAGAATATGCAGAAATA...TAAATATAGTAGCAGGATGAGGAACCTCAAACTGGGTATCATTTTGCACGTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS-3UTR TCA 90 bp AAGGGGAAGAGAATCTTACTGCCAATGGGATCAATTATTTTAAAGAACTCGCAGAAACCAGTAGAAAGTTaGTTGAAGTATCTAGGATGC +
Preference number: 4 (lower is better)
Translates to: KGKRILLPMGSIILKNSQKPVES*LKYLGC
Trigger: GCATCCTAGATACTTCAATCAACTTTCTACTGGTTT...CTGCGAGTTCTTTAAAATAATTGATCCCATTGGCAGTAAGATTCTCTTCCCCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS-3UTR TCA 90 bp ATTCAGAAACACCAATTTGGGAACGGTAGTTTGGCACACCTAACTAATAAATACTGGCCATGTCAGTTCTaGTTAAAGCTAAAACCAAAC +
Preference number: 4 (lower is better)
Translates to: IQKHQFGNGSLAHLTNKYWPCQF*LKLKPN
Trigger: GTTTGGTTTTAGCTTTAATCAGAACTGACATGGCCA...GTATTTATTAGTTAGGTGTGCCAAACTACCGTTCCCAAATTGGTGTTTCTGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS-3UTR GCA 90 bp AGCACGTGCAAAATGATACCCAGTTTGAGGTTCCTCATCCTGCTACTATATTTAAGAGTTGTTTGGCAATaGATCAAAATTTCCTCCAAA +
Preference number: 4 (lower is better)
Translates to: STCKMIPSLRFLILLLYLRVVWQ*IKISSK
Trigger: TTTGGAGGAAATTTTGATGCATTGCCAAACAACTCT...TAAATATAGTAGCAGGATGAGGAACCTCAAACTGGGTATCATTTTGCACGTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR GCA 90 bp AACCCATTTGTTTTTCTAGACAGAAAGGGCCCAAAGCCATGTTCATATCAAGTTATTTGGTTGCAATTCTaGATCAATCCCTCTTCTCTA +
Preference number: 4 (lower is better)
Translates to: NPFVFLDRKGPKPCSYQVIWLQF*INPSSL
Trigger: TAGAGAAGAGGGATTGATGCAGAATTGCAACCAAAT...AACTTGATATGAACATGGCTTTGGGCCCTTTCTGTCTAGAAAAACAAATGGGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS-3UTR GCA 90 bp ATACTTGGATCATACACAAGTTTATATTTGGTAGGAAGAACAGGTTGCCACATGAAACATTTATCAACATaGGCTTCAAACCCGGTAGTC +
Preference number: 4 (lower is better)
Translates to: ILGSYTSLYLVGRTGCHMKHLST*ASNPVV
Trigger: GACTACCGGGTTTGAAGCGCATGTTGATAAATGTTT...CATGTGGCAACCTGTTCTTCCTACCAAATATAAACTTGTGTATGATCCAAGTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR GCA 90 bp TACTATATTTACACCTGTGCCTTCTTTGTCCATATTCTGAAGAGTAGCAACTACAAACATTTATCAACATaGGCTTCAAACCCGGTAGTC +
Preference number: 4 (lower is better)
Translates to: YYIYTCAFFVHILKSSNYKHLST*ASNPVV
Trigger: GACTACCGGGTTTGAAGCGCATGTTGATAAATGTTT...GTAGTTGCTACTCTTCAGAATATGGACAAAGAAGGCACAGGTGTAAATATAGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR CCA 90 bp AATACTTGGATCATACACAAGTTTATATTTGGTAGGAAGAACAGGTTGCCACATTTCCTCCAAATTTTGTaGTTGGTCTGCCAATTCCCA +
Preference number: 4 (lower is better)
Translates to: NTWIIHKFIFGRKNRLPHFLQIL*LVCQFP
Trigger: TGGGAATTGGCAGACCAACCACAAAATTTGGAGGAA...ATGTGGCAACCTGTTCTTCCTACCAAATATAAACTTGTGTATGATCCAAGTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR CCA 90 bp AATACTTGGATCATACACAAGTTTATATTTGGTAGGAAGAACAGGTTGCCACATTTTCTCCTTGACTTCTaGGAACATCTTAAAGCGTGC +
Preference number: 4 (lower is better)
Translates to: NTWIIHKFIFGRKNRLPHFLLDF*EHLKAC
Trigger: GCACGCTTTAAGATGTTCCCAGAAGTCAAGGAGAAA...ATGTGGCAACCTGTTCTTCCTACCAAATATAAACTTGTGTATGATCCAAGTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR CCA 90 bp TACTATATTTACACCTGTGCCTTCTTTGTCCATATTCTGAAGAGTAGCAACTACTTCTCAGAGACAAAGTaGTGTTCACCTTGCATTTTG +
Preference number: 4 (lower is better)
Translates to: YYIYTCAFFVHILKSSNYFSETK*CSPCIL
Trigger: CAAAATGCAAGGTGAACACCACTTTGTCTCTGAGAA...GTAGTTGCTACTCTTCAGAATATGGACAAAGAAGGCACAGGTGTAAATATAGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR CCA 90 bp ATTCAGAAACACCAATTTGGGAACGGTAGTTTGGCACACCTAACTAATAAATACGATGGCTGGATCCTGTaGTTATATTATAGGGCATTT +
Preference number: 4 (lower is better)
Translates to: IQKHQFGNGSLAHLTNKYDGWIL*LYYRAF
Trigger: AAATGCCCTATAATATAACCACAGGATCCAGCCATC...GTATTTATTAGTTAGGTGTGCCAAACTACCGTTCCCAAATTGGTGTTTCTGAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS-3UTR TCA 90 bp ATACTTGGATCATACACAAGTTTATATTTGGTAGGAAGAACAGGTTGCCACATGAAACCAGTAGAAAGTTaGTTGAAGTATCTAGGATGC +
Preference number: 4 (lower is better)
Translates to: ILGSYTSLYLVGRTGCHMKPVES*LKYLGC
Trigger: GCATCCTAGATACTTCAATCAACTTTCTACTGGTTT...CATGTGGCAACCTGTTCTTCCTACCAAATATAAACTTGTGTATGATCCAAGTAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR GCA 90 bp ATTCAGAAACACCAATTTGGGAACGGTAGTTTGGCACACCTAACTAATAAATACCTTAGATTTTATATCTaGCCCCGCAGTTTGTATAAC +
Preference number: 4 (lower is better)
Translates to: IQKHQFGNGSLAHLTNKYLRFYI*PRSLYN
Trigger: GTTATACAAACTGCGGGGGCAGATATAAAATCTAAG...GTATTTATTAGTTAGGTGTGCCAAACTACCGTTCCCAAATTGGTGTTTCTGAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS-3UTR GCA 90 bp AAGGGGAAGAGAATCTTACTGCCAATGGGATCAATTATTTTAAAGAACTCGCAGAAACACATGTTGATTTaGAACACTGTACAGTTCAGA +
Preference number: 4 (lower is better)
Translates to: KGKRILLPMGSIILKNSQKHMLI*NTVQFR
Trigger: TCTGAACTGTACAGTGTTGCAAATCAACATGTGTTT...CTGCGAGTTCTTTAAAATAATTGATCCCATTGGCAGTAAGATTCTCTTCCCCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS-3UTR CCA 90 bp TACTATATTTACACCTGTGCCTTCTTTGTCCATATTCTGAAGAGTAGCAACTACTCCAAATTTTGTGGTTaGTCTGCCAATTCCCAATTA +
Preference number: 4 (lower is better)
Translates to: YYIYTCAFFVHILKSSNYSKFCG*SANSQL
Trigger: TAATTGGGAATTGGCAGACCAACCACAAAATTTGGA...GTAGTTGCTACTCTTCAGAATATGGACAAAGAAGGCACAGGTGTAAATATAGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR CCA 90 bp AACCCATTTGTTTTTCTAGACAGAAAGGGCCCAAAGCCATGTTCATATCAAGTTCAAAAGCACAAATACTaGAGCAATTTCATAGGTGAA +
Preference number: 4 (lower is better)
Translates to: NPFVFLDRKGPKPCSYQVQKHKY*SNFIGE
Trigger: TTCACCTATGAAATTGCTCCAGTATTTGTGCTTTTG...AACTTGATATGAACATGGCTTTGGGCCCTTTCTGTCTAGAAAAACAAATGGGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS-3UTR CCA 90 bp CACATAAAGACCATGGCACTGGGAATTTGGGCTAATATTAAAAATAATCTCCCTCAAACCCTTTCTGTTTaGCTTCAAGAATCCTTCTTT +
Preference number: 4 (lower is better)
Translates to: HIKTMALGIWANIKNNLPQTLSV*LQESFF
Trigger: AAAGAAGGATTCTTGAAGCCAAACAGAAAGGGTTTG...AGGGAGATTATTTTTAATATTAGCCCAAATTCCCAGTGCCATGGTCTTTATGTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS-3UTR CCA 90 bp AATACTTGGATCATACACAAGTTTATATTTGGTAGGAAGAACAGGTTGCCACATTTCTCAGAGACAAAGTaGTGTTCACCTTGCATTTTG +
Preference number: 4 (lower is better)
Translates to: NTWIIHKFIFGRKNRLPHFSETK*CSPCIL
Trigger: CAAAATGCAAGGTGAACACCACTTTGTCTCTGAGAA...ATGTGGCAACCTGTTCTTCCTACCAAATATAAACTTGTGTATGATCCAAGTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR GCA 90 bp CACATAAAGACCATGGCACTGGGAATTTGGGCTAATATTAAAAATAATCTCCCTCTATATTTACACCTGTaGCTTCTTTGTCCATATTCT +
Preference number: 4 (lower is better)
Translates to: HIKTMALGIWANIKNNLPLYLHL*LLCPYS
Trigger: AGAATATGGACAAAGAAGGCACAGGTGTAAATATAG...AGGGAGATTATTTTTAATATTAGCCCAAATTCCCAGTGCCATGGTCTTTATGTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS-3UTR GCA 90 bp TACTATATTTACACCTGTGCCTTCTTTGTCCATATTCTGAAGAGTAGCAACTACGTAGGAAGAACAGGTTaGCACATGTTTGTATATTTT +
Preference number: 4 (lower is better)
Translates to: YYIYTCAFFVHILKSSNYVGRTG*HMFVYF
Trigger: AAAATATACAAACATGTGGCAACCTGTTCTTCCTAC...GTAGTTGCTACTCTTCAGAATATGGACAAAGAAGGCACAGGTGTAAATATAGTA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR CCA 90 bp CACATAAAGACCATGGCACTGGGAATTTGGGCTAATATTAAAAATAATCTCCCTTATGAAAATTTCAGATaGCTGGATCCTGTGGTTATA +
Preference number: 4 (lower is better)
Translates to: HIKTMALGIWANIKNNLPYENFR*LDPVVI
Trigger: TATAACCACAGGATCCAGCCATCTGAAATTTTCATA...AGGGAGATTATTTTTAATATTAGCCCAAATTCCCAGTGCCATGGTCTTTATGTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS GCA 90 bp TGGAGACTGGAGCAGGTCGCCTGCGAGTGCGAGCTGCGGGCGAGCTaGCTCGGGCTTGGCCCTGCGCGCGCGTGCGTGCCCGTGTGGCGG +
Preference number: 5 (lower is better)
Translates to: WRLEQVACECELRAS*LGLGPARACVPVWR
Trigger: CCGCCACACGGGCACGCACGCGCGCGCAGGGCCAAGCCCGAGGCAGCTCGCCCGCAGCTCGCACTCGCAGGCGACCTGCTCCAGTCTCCA
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259271.7
CDS GCA 90 bp GCCATCGGCTTTGGAGACTGGAGCAGGTCGCCTGCGAGTGCGAGCTaGGGGCGAGCTGCCTCGGGCTTGGCCCTGCGCGCGCGTGCGTGC +
Preference number: 5 (lower is better)
Translates to: AIGFGDWSRSPASAS*GRAASGLALRARAC
Trigger: GCACGCACGCGCGCGCAGGGCCAAGCCCGAGGCAGCTCGCCCGCAGCTCGCACTCGCAGGCGACCTGCTCCAGTCTCCAAAGCCGATGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259271.7
CDS GCA 90 bp AGAGCCCGGAGATGCCATCGGCTTTGGAGACTGGAGCAGGTCGCCTaGGAGTGCGAGCTGCGGGCGAGCTGCCTCGGGCTTGGCCCTGCG +
Preference number: 5 (lower is better)
Translates to: RARRCHRLWRLEQVA*ECELRASCLGLGPA
Trigger: CGCAGGGCCAAGCCCGAGGCAGCTCGCCCGCAGCTCGCACTCGCAGGCGACCTGCTCCAGTCTCCAAAGCCGATGGCATCTCCGGGCTCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259271.7
ENST00000428517.2
CDS CCA 90 bp CCTAGGGAAGCCAGCCGTCATCGATTCAGTGAGCGCACGAGCGCCTaGATCGTCGGCCACCCGCCATCCCAAGGGCCGCGCTGGGGGAAG +
Preference number: 5 (lower is better)
Translates to: PREASRHRFSERTSA*IVGHPPSQGPRWGK
Trigger: CTTCCCCCAGCGCGGCCCTTGGGATGGCGGGTGGCCGACGATCCAGGCGCTCGTGCGCTCACTGAATCGATGACGGCTGGCTTCCCTAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376248.1
CDS CCA 90 bp CGACCCGAAAGACCAAAAGCCAGAGCCCGGAGATGCCATCGGCTTTaGAGACTGGAGCAGGTCGCCTGCGAGTGCGAGCTGCGGGCGAGC +
Preference number: 5 (lower is better)
Translates to: RPERPKARARRCHRL*RLEQVACECELRAS
Trigger: GCTCGCCCGCAGCTCGCACTCGCAGGCGACCTGCTCCAGTCTCCAAAGCCGATGGCATCTCCGGGCTCTGGCTTTTGGTCTTTCGGGTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259271.7
ENST00000428517.2
CDS CCA 90 bp AAAGACCAAAAGCCAGAGCCCGGAGATGCCATCGGCTTTGGAGACTaGAGCAGGTCGCCTGCGAGTGCGAGCTGCGGGCGAGCTGCCTCG +
Preference number: 5 (lower is better)
Translates to: KDQKPEPGDAIGFGD*SRSPASASCGRAAS
Trigger: CGAGGCAGCTCGCCCGCAGCTCGCACTCGCAGGCGACCTGCTCCAGTCTCCAAAGCCGATGGCATCTCCGGGCTCTGGCTTTTGGTCTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259271.7
ENST00000428517.2
CDS TCA 90 bp CGTCTCCGTAGAGCAGGGCGCACAGTTTGTTTCCGATGCCGCCCGTaGACTTCTGAGCCACTTGGCACCAGGCTCGCGCTGTGCCGGGAT +
Preference number: 5 (lower is better)
Translates to: RLRRAGRTVCFRCRP*TSEPLGTRLALCRD
Trigger: ATCCCGGCACAGCGCGAGCCTGGTGCCAAGTGGCTCAGAAGTTCACGGGCGGCATCGGAAACAAACTGTGCGCCCTGCTCTACGGAGACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000428517.2
CDS GCA 90 bp AGAGCCATCTTCCGACCCGAAAGACCAAAAGCCAGAGCCCGGAGATaGCATCGGCTTTGGAGACTGGAGCAGGTCGCCTGCGAGTGCGAG +
Preference number: 5 (lower is better)
Translates to: RAIFRPERPKARARR*HRLWRLEQVACECE
Trigger: CTCGCACTCGCAGGCGACCTGCTCCAGTCTCCAAAGCCGATGGCATCTCCGGGCTCTGGCTTTTGGTCTTTCGGGTCGGAAGATGGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259271.7
ENST00000428517.2
CDS TCA 90 bp CATCACACGCCGGCAGCAGGTCTGTTGCATGGAGAAACGCGTAGTTaGCATCCACTTTGGAGCAGCTGCAGGGCTTCTGGTCGCAGGCGC +
Preference number: 5 (lower is better)
Translates to: HHTPAAGLLHGETRS*HPLWSSCRASGRRR
Trigger: GCGCCTGCGACCAGAAGCCCTGCAGCTGCTCCAAAGTGGATGTCAACTACGCGTTTCTCCATGCAACAGACCTGCTGCCGGCGTGTGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000428517.2
ENST00000648567.1
CDS TCA 90 bp CGTCTCCGTAGAGCAGGGCGCACAGTTTGTTTCCGATGCCGCCCGTaGACTTCTGAGCCACTTGGCACCAGGCTCGCGCTTTCCCATTTT +
Preference number: 5 (lower is better)
Translates to: RLRRAGRTVCFRCRP*TSEPLGTRLALSHF
Trigger: AAAATGGGAAAGCGCGAGCCTGGTGCCAAGTGGCTCAGAAGTTCACGGGCGGCATCGGAAACAAACTGTGCGCCCTGCTCTACGGAGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648567.1
CDS-3UTR CAA 90 bp AGAGTAGCAACTACTCCAGTGACCAGCAGAGCCAACACCTACGATTTTGGCAGCCCGGCAGCAGGTCTGTaGCATGGAGAAACGCGTAGT +
Preference number: 5 (lower is better)
Translates to: RVATTPVTSRANTYDFGSPAAGL*HGETRS
Trigger: ACTACGCGTTTCTCCATGCAACAGACCTGCTGCCGG...GCTGCCAAAATCGTAGGTGTTGGCTCTGCTGGTCACTGGAGTAGTTGCTACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR CAA 90 bp GGGCATTTCTACCCGTTGAAGGGCAGGGCCTTCTCTCTTCCCTTGTATACCTGCCAGGAAGTCAATGTCTaGGTGAGTTGCCGCTGGGTT +
Preference number: 5 (lower is better)
Translates to: GHFYPLKGRAFSLPLYTCQEVNV*VSCRWV
Trigger: AACCCAGCGGCAACTCACCAAGACATTGACTTCCTG...GCAGGTATACAAGGGAAGAGAGAAGGCCCTGCCCTTCAACGGGTAGAAATGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS-3UTR CAA 90 bp GGTCCCAGTGGTAGGGAGTCTAGTGGGAGAGACTTTGTGGGGAGGAATGGGGAGTTCAGAAACACCAATTaGGGAACGGTAGTTTGGCAC +
Preference number: 5 (lower is better)
Translates to: GPSGRESSGRDFVGRNGEFRNTN*GTVVWH
Trigger: GTGCCAAACTACCGTTCCCAAATTGGTGTTTCTGAA...CTCCCCATTCCTCCCCACAAAGTCTCTCCCACTAGACTCCCTACCACTGGGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS-3UTR CAA 90 bp ACAATTCTCAAAGGAAGTTTCTCAGTAGGGGGCTTAGCTGAGGGCATGTTCTCTTTCCACGTCACAGAGTaGGCCCTCTCCACGCCACTC +
Preference number: 5 (lower is better)
Translates to: TILKGSFSVGGLAEGMFSFHVTE*ALSTPL
Trigger: GAGTGGCGTGGAGAGGGCCAACTCTGTGACGTGGAA...AGAGAACATGCCCTCAGCTAAGCCCCCTACTGAGAAACTTCCTTTGAGAATTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR CAA 90 bp AGAGTAGCAACTACTCCAGTGACCAGCAGAGCCAACACCTACGATTTTGGCAGCCCAGAGTACGCAAGCTaGGAGGAATGTACCAGAAGC +
Preference number: 5 (lower is better)
Translates to: RVATTPVTSRANTYDFGSPEYAS*EECTRS
Trigger: GCTTCTGGTACATTCCTCCAAGCTTGCGTACTCTGG...GCTGCCAAAATCGTAGGTGTTGGCTCTGCTGGTCACTGGAGTAGTTGCTACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR CAA 90 bp AAGAGTAGCAACTACTCCAGTGACCAGCAGAGCCAACACCTACGATTTTGGCAGCCTGGTTTGTCACGCTaGCAGAGTGAGTCCGCTAAG +
Preference number: 5 (lower is better)
Translates to: KSSNYSSDQQSQHLRFWQPGLSR*QSESAK
Trigger: CTTAGCGGACTCACTCTGCAAGCGTGACAAACCAGG...CTGCCAAAATCGTAGGTGTTGGCTCTGCTGGTCACTGGAGTAGTTGCTACTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS-3UTR CAA 90 bp CGCACAATTCTCAAAGGAAGTTTCTCAGTAGGGGGCTTAGCTGAGGGCATGTTCTCTGAAGTGGAACCTTaGGGCCTGAGGCTCCGGATA +
Preference number: 5 (lower is better)
Translates to: RTILKGSFSVGGLAEGMFSEVEP*GLRLRI
Trigger: TATCCGGAGCCTCAGGCCCAAAGGTTCCACTTCAGA...GAACATGCCCTCAGCTAAGCCCCCTACTGAGAAACTTCCTTTGAGAATTGTGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS-3UTR CAA 90 bp GGGCATTTCTACCCGTTGAAGGGCAGGGCCTTCTCTCTTCCCTTGTATACCTGCACGAAGGACAGCAGGTaGGATCAATTAGCATCTCTG +
Preference number: 5 (lower is better)
Translates to: GHFYPLKGRAFSLPLYTCTKDSR*DQLASL
Trigger: CAGAGATGCTAATTGATCCAACCTGCTGTCCTTCGT...GCAGGTATACAAGGGAAGAGAGAAGGCCCTGCCCTTCAACGGGTAGAAATGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS-3UTR CAA 90 bp GGAAGTTTCTCAGTAGGGGGCTTAGCTGAGGGCATGTTCTCTAGAGAAGTGGAACCAGAGTACGCAAGCTaGGAGGAATGTACCAGAAGC +
Preference number: 5 (lower is better)
Translates to: GSFSVGGLAEGMFSREVEPEYAS*EECTRS
Trigger: GCTTCTGGTACATTCCTCCAAGCTTGCGTACTCTGG...TTCCACTTCTCTAGAGAACATGCCCTCAGCTAAGCCCCCTACTGAGAAACTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000259271.7
ENST00000648567.1
CDS-3UTR CAA 90 bp GGGCATTTCTACCCGTTGAAGGGCAGGGCCTTCTCTCTTCCCTTGTATACCTGCCTCATTCTCTCTTCATaGTCTTCCAGAGTACGCAAG +
Preference number: 5 (lower is better)
Translates to: GHFYPLKGRAFSLPLYTCLILSS*SSRVRK
Trigger: CTTGCGTACTCTGGAAGACAATGAAGAGAGAATGAG...GCAGGTATACAAGGGAAGAGAGAAGGCCCTGCCCTTCAACGGGTAGAAATGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS-3UTR CAA 90 bp AGAGTAGCAACTACTCCAGTGACCAGCAGAGCCAACACCTACGATTTTGGCAGCACCATGCGGAAGAAATaGACCTTGTCTCCCAAGGGT +
Preference number: 5 (lower is better)
Translates to: RVATTPVTSRANTYDFGSTMRKK*TLSPKG
Trigger: ACCCTTGGGAGACAAGGTCAATTTCTTCCGCATGGT...GCTGCCAAAATCGTAGGTGTTGGCTCTGCTGGTCACTGGAGTAGTTGCTACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR CAA 90 bp AATGCCTCAAAATCTAGGGTGAGAGGCTCATTTCATGGAAGAAAAACAACCACCGAGATGCCATCGGCTTaGGAGACTGGAGCAGGTCGC +
Preference number: 5 (lower is better)
Translates to: NASKSRVRGSFHGRKTTTEMPSA*ETGAGR
Trigger: GCGACCTGCTCCAGTCTCCAAAGCCGATGGCATCTC...GGTGGTTGTTTTTCTTCCATGAAATGAGCCTCTCACCCTAGATTTTGAGGCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS-3UTR CAA 90 bp GATAATGCCTCAAAATCTAGGGTGAGAGGCTCATTTCATGGAAGAAAAACAACCAGCAGGGCGCACAGTTaGTTTCCGATGCCGCCCGTG +
Preference number: 5 (lower is better)
Translates to: DNASKSRVRGSFHGRKTTSRAHS*FPMPPV
Trigger: CACGGGCGGCATCGGAAACAAACTGTGCGCCCTGCT...GGTTGTTTTTCTTCCATGAAATGAGCCTCTCACCCTAGATTTTGAGGCATTATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS-3UTR CAA 90 bp ATTGGTAACGTCTGTTCTCAGAGACAAAGTGGTGTTCACCTTGCATTTTGTGAAAGCAGGGCGCACAGTTaGTTTCCGATGCCGCCCGTG +
Preference number: 5 (lower is better)
Translates to: IGNVCSQRQSGVHLAFCESRAHS*FPMPPV
Trigger: CACGGGCGGCATCGGAAACAAACTGTGCGCCCTGCT...TTCACAAAATGCAAGGTGAACACCACTTTGTCTCTGAGAACAGACGTTACCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR CAA 90 bp AGAGTAGCAACTACTCCAGTGACCAGCAGAGCCAACACCTACGATTTTGGCAGCCCACTCAGTTTCCACTaGTGTTTTCGGGACATCAGT +
Preference number: 5 (lower is better)
Translates to: RVATTPVTSRANTYDFGSPLSFH*CFRDIS
Trigger: ACTGATGTCCCGAAAACACAAGTGGAAACTGAGTGG...GCTGCCAAAATCGTAGGTGTTGGCTCTGCTGGTCACTGGAGTAGTTGCTACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR CAA 90 bp AATGCCTCAAAATCTAGGGTGAGAGGCTCATTTCATGGAAGAAAAACAACCACCTGGAGTACAGCAGGGTaGGTTCACCAGGGCACTGGG +
Preference number: 5 (lower is better)
Translates to: NASKSRVRGSFHGRKTTTWSTAG*VHQGTG
Trigger: CCCAGTGCCCTGGTGAACCAACCCTGCTGTACTCCA...GGTGGTTGTTTTTCTTCCATGAAATGAGCCTCTCACCCTAGATTTTGAGGCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS-3UTR CAA 90 bp ATTGGTAACGTCTGTTCTCAGAGACAAAGTGGTGTTCACCTTGCATTTTGTGAATTCCACGTCACAGAGTaGGCCCTCTCCACGCCACTC +
Preference number: 5 (lower is better)
Translates to: IGNVCSQRQSGVHLAFCEFHVTE*ALSTPL
Trigger: GAGTGGCGTGGAGAGGGCCAACTCTGTGACGTGGAA...TTCACAAAATGCAAGGTGAACACCACTTTGTCTCTGAGAACAGACGTTACCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR CAA 90 bp CTGAAGAGTAGCAACTACTCCAGTGACCAGCAGAGCCAACACCTACGATTTTGGGAGGCATGCATTTGGTaGCAATTCTGCATCAATCCC +
Preference number: 5 (lower is better)
Translates to: LKSSNYSSDQQSQHLRFWEACIW*QFCINP
Trigger: GGGATTGATGCAGAATTGCAACCAAATGCATGCCTC...CCAAAATCGTAGGTGTTGGCTCTGCTGGTCACTGGAGTAGTTGCTACTCTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR CAA 90 bp AGAGTAGCAACTACTCCAGTGACCAGCAGAGCCAACACCTACGATTTTGGCAGCGTAGGAGGCATGCATTaGGTTGCAATTCTGCATCAA +
Preference number: 5 (lower is better)
Translates to: RVATTPVTSRANTYDFGSVGGMH*VAILHQ
Trigger: TTGATGCAGAATTGCAACCAAATGCATGCCTCCTAC...GCTGCCAAAATCGTAGGTGTTGGCTCTGCTGGTCACTGGAGTAGTTGCTACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR CAA 90 bp GGGCATTTCTACCCGTTGAAGGGCAGGGCCTTCTCTCTTCCCTTGTATACCTGCGAAACACATGTTGATTaGCAACACTGTACAGTTCAG +
Preference number: 5 (lower is better)
Translates to: GHFYPLKGRAFSLPLYTCETHVD*QHCTVQ
Trigger: CTGAACTGTACAGTGTTGCAAATCAACATGTGTTTC...GCAGGTATACAAGGGAAGAGAGAAGGCCCTGCCCTTCAACGGGTAGAAATGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS-3UTR CAA 90 bp CACGTGCAAAATGATACCCAGTTTGAGGTTCCTCATCCTGCTACTATATTTACACCGGCAGCAGGTCTGTaGCATGGAGAAACGCGTAGT +
Preference number: 5 (lower is better)
Translates to: HVQNDTQFEVPHPATIFTPAAGL*HGETRS
Trigger: ACTACGCGTTTCTCCATGCAACAGACCTGCTGCCGG...TGTAAATATAGTAGCAGGATGAGGAACCTCAAACTGGGTATCATTTTGCACGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR CAA 90 bp AAGAGTAGCAACTACTCCAGTGACCAGCAGAGCCAACACCTACGATTTTGGCAGGCCATTCCTTTCTCCTaGACTTCTGGGAACATCTTA +
Preference number: 5 (lower is better)
Translates to: KSSNYSSDQQSQHLRFWQAIPFS*TSGNIL
Trigger: TAAGATGTTCCCAGAAGTCAAGGAGAAAGGAATGGC...CTGCCAAAATCGTAGGTGTTGGCTCTGCTGGTCACTGGAGTAGTTGCTACTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR CAA 90 bp TACACCTGTGCCTTCTTTGTCCATATTCTGAAGAGTAGCAACTACTCCAGTGACCAGGAAGTCAATGTCTaGGTGAGTTGCCGCTGGGTT +
Preference number: 5 (lower is better)
Translates to: YTCAFFVHILKSSNYSSDQEVNV*VSCRWV
Trigger: AACCCAGCGGCAACTCACCAAGACATTGACTTCCTG...GTCACTGGAGTAGTTGCTACTCTTCAGAATATGGACAAAGAAGGCACAGGTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR CAA 90 bp GGAAGTTTCTCAGTAGGGGGCTTAGCTGAGGGCATGTTCTCTAGAGAAGTGGAAAAAGTGGTGTTCACCTaGCATTTTGTGAAGTCGCAC +
Preference number: 5 (lower is better)
Translates to: GSFSVGGLAEGMFSREVEKVVFT*HFVKSH
Trigger: GTGCGACTTCACAAAATGCAAGGTGAACACCACTTT...TTCCACTTCTCTAGAGAACATGCCCTCAGCTAAGCCCCCTACTGAGAAACTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000259271.7
ENST00000648567.1
CDS-3UTR CAA 90 bp ACCTTGCATTTTGTGAAGTCGCACAATTCTCAAAGGAAGTTTCTCAGTAGGGGGCCAACACCTACGATTTaGGCAGCTGGTGACACTCCA +
Preference number: 5 (lower is better)
Translates to: TLHFVKSHNSQRKFLSRGPTPTI*AAGDTP
Trigger: TGGAGTGTCACCAGCTGCCAAAATCGTAGGTGTTGG...CCCCCTACTGAGAAACTTCCTTTGAGAATTGTGCGACTTCACAAAATGCAAGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR CAA 90 bp ACCTTGCATTTTGTGAAGTCGCACAATTCTCAAAGGAAGTTTCTCAGTAGGGGGAGGCTCTCAGCCAATTaGAAGGAGTACTGGGAAGGG +
Preference number: 5 (lower is better)
Translates to: TLHFVKSHNSQRKFLSRGRLSAN*KEYWEG
Trigger: CCCTTCCCAGTACTCCTTCAAATTGGCTGAGAGCCT...CCCCCTACTGAGAAACTTCCTTTGAGAATTGTGCGACTTCACAAAATGCAAGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS-3UTR CAA 90 bp TACTATATTTACACCTGTGCCTTCTTTGTCCATATTCTGAAGAGTAGCAACTACGAGATGCCATCGGCTTaGGAGACTGGAGCAGGTCGC +
Preference number: 5 (lower is better)
Translates to: YYIYTCAFFVHILKSSNYEMPSA*ETGAGR
Trigger: GCGACCTGCTCCAGTCTCCAAAGCCGATGGCATCTC...GTAGTTGCTACTCTTCAGAATATGGACAAAGAAGGCACAGGTGTAAATATAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259271.7
ENST00000376261.8
CDS-3UTR CAA 90 bp AATACTTGGATCATACACAAGTTTATATTTGGTAGGAAGAACAGGTTGCCACATAGCAGGGCGCACAGTTaGTTTCCGATGCCGCCCGTG +
Preference number: 5 (lower is better)
Translates to: NTWIIHKFIFGRKNRLPHSRAHS*FPMPPV
Trigger: CACGGGCGGCATCGGAAACAAACTGTGCGCCCTGCT...ATGTGGCAACCTGTTCTTCCTACCAAATATAAACTTGTGTATGATCCAAGTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR CAA 90 bp TTCTCAGTAGGGGGCTTAGCTGAGGGCATGTTCTCTAGAGAAGTGGAACAGCTTCTCCAAATTTTGTGGTaGGTCTGCCAATTCCCAATT +
Preference number: 5 (lower is better)
Translates to: FSVGGLAEGMFSREVEQLLQILW*VCQFPI
Trigger: AATTGGGAATTGGCAGACCAACCACAAAATTTGGAG...AAGCTGTTCCACTTCTCTAGAGAACATGCCCTCAGCTAAGCCCCCTACTGAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000259271.7
ENST00000648567.1
CDS-3UTR CAA 90 bp GGAAGTTTCTCAGTAGGGGGCTTAGCTGAGGGCATGTTCTCTAGAGAAGTGGAACTCCAAATTTTGTGGTaGGTCTGCCAATTCCCAATT +
Preference number: 5 (lower is better)
Translates to: GSFSVGGLAEGMFSREVELQILW*VCQFPI
Trigger: AATTGGGAATTGGCAGACCAACCACAAAATTTGGAG...TTCCACTTCTCTAGAGAACATGCCCTCAGCTAAGCCCCCTACTGAGAAACTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000259271.7
ENST00000648567.1
CDS-3UTR CAA 90 bp AGAGTAGCAACTACTCCAGTGACCAGCAGAGCCAACACCTACGATTTTGGCAGCAATTTCCTCCAAATTTaGTGGTTGGTCTGCCAATTC +
Preference number: 5 (lower is better)
Translates to: RVATTPVTSRANTYDFGSNFLQI*WLVCQF
Trigger: GAATTGGCAGACCAACCACAAAATTTGGAGGAAATT...GCTGCCAAAATCGTAGGTGTTGGCTCTGCTGGTCACTGGAGTAGTTGCTACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR CAA 90 bp ATTCAGAAACACCAATTTGGGAACGGTAGTTTGGCACACCTAACTAATAAATACTTCCACGTCACAGAGTaGGCCCTCTCCACGCCACTC +
Preference number: 5 (lower is better)
Translates to: IQKHQFGNGSLAHLTNKYFHVTE*ALSTPL
Trigger: GAGTGGCGTGGAGAGGGCCAACTCTGTGACGTGGAA...GTATTTATTAGTTAGGTGTGCCAAACTACCGTTCCCAAATTGGTGTTTCTGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR CAA 90 bp AGAGTAGCAACTACTCCAGTGACCAGCAGAGCCAACACCTACGATTTTGGCAGCTTTGGGAACGGTAGTTaGGCACACCTAACTAATAAA +
Preference number: 5 (lower is better)
Translates to: RVATTPVTSRANTYDFGSFGNGS*AHLTNK
Trigger: TTTATTAGTTAGGTGTGCCAAACTACCGTTCCCAAA...GCTGCCAAAATCGTAGGTGTTGGCTCTGCTGGTCACTGGAGTAGTTGCTACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR CAA 90 bp ATACTTGGATCATACACAAGTTTATATTTGGTAGGAAGAACAGGTTGCCACATGCCGGCAGCAGGTCTGTaGCATGGAGAAACGCGTAGT +
Preference number: 5 (lower is better)
Translates to: ILGSYTSLYLVGRTGCHMPAAGL*HGETRS
Trigger: ACTACGCGTTTCTCCATGCAACAGACCTGCTGCCGG...CATGTGGCAACCTGTTCTTCCTACCAAATATAAACTTGTGTATGATCCAAGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR CAA 90 bp CGCACAATTCTCAAAGGAAGTTTCTCAGTAGGGGGCTTAGCTGAGGGCATGTTCAATTTCCTCCAAATTTaGTGGTTGGTCTGCCAATTC +
Preference number: 5 (lower is better)
Translates to: RTILKGSFSVGGLAEGMFNFLQI*WLVCQF
Trigger: GAATTGGCAGACCAACCACAAAATTTGGAGGAAATT...GAACATGCCCTCAGCTAAGCCCCCTACTGAGAAACTTCCTTTGAGAATTGTGCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR CAA 90 bp ACAATTCTCAAAGGAAGTTTCTCAGTAGGGGGCTTAGCTGAGGGCATGTTCTCTGCCATTCCTTTCTCCTaGACTTCTGGGAACATCTTA +
Preference number: 5 (lower is better)
Translates to: TILKGSFSVGGLAEGMFSAIPFS*TSGNIL
Trigger: TAAGATGTTCCCAGAAGTCAAGGAGAAAGGAATGGC...AGAGAACATGCCCTCAGCTAAGCCCCCTACTGAGAAACTTCCTTTGAGAATTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR CAA 90 bp CGCACAATTCTCAAAGGAAGTTTCTCAGTAGGGGGCTTAGCTGAGGGCATGTTCCAGATCTTATACTTTTaGCAAATGTCAGCGACAGCT +
Preference number: 5 (lower is better)
Translates to: RTILKGSFSVGGLAEGMFQILYF*QMSATA
Trigger: AGCTGTCGCTGACATTTGCAAAAAGTATAAGATCTG...GAACATGCCCTCAGCTAAGCCCCCTACTGAGAAACTTCCTTTGAGAATTGTGCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR CAA 90 bp TACACCTGTGCCTTCTTTGTCCATATTCTGAAGAGTAGCAACTACTCCAGTGACGAGGCATGCATTTGGTaGCAATTCTGCATCAATCCC +
Preference number: 5 (lower is better)
Translates to: YTCAFFVHILKSSNYSSDEACIW*QFCINP
Trigger: GGGATTGATGCAGAATTGCAACCAAATGCATGCCTC...GTCACTGGAGTAGTTGCTACTCTTCAGAATATGGACAAAGAAGGCACAGGTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR CAA 90 bp ACAATTCTCAAAGGAAGTTTCTCAGTAGGGGGCTTAGCTGAGGGCATGTTCTCTGTAGGAGGCATGCATTaGGTTGCAATTCTGCATCAA +
Preference number: 5 (lower is better)
Translates to: TILKGSFSVGGLAEGMFSVGGMH*VAILHQ
Trigger: TTGATGCAGAATTGCAACCAAATGCATGCCTCCTAC...AGAGAACATGCCCTCAGCTAAGCCCCCTACTGAGAAACTTCCTTTGAGAATTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR CAA 90 bp AGGTTCCTCATCCTGCTACTATATTTACACCTGTGCCTTCTTTGTCCATATTCTCCAGAGTACGCAAGCTaGGAGGAATGTACCAGAAGC +
Preference number: 5 (lower is better)
Translates to: RFLILLLYLHLCLLCPYSPEYAS*EECTRS
Trigger: GCTTCTGGTACATTCCTCCAAGCTTGCGTACTCTGG...AGAATATGGACAAAGAAGGCACAGGTGTAAATATAGTAGCAGGATGAGGAACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR CAA 90 bp GAACAGAAGAGCACGTGCAAAATGATACCCAGTTTGAGGTTCCTCATCCTGCTACTCATTCTCTCTTCATaGTCTTCCAGAGTACGCAAG +
Preference number: 5 (lower is better)
Translates to: EQKSTCKMIPSLRFLILLLILSS*SSRVRK
Trigger: CTTGCGTACTCTGGAAGACAATGAAGAGAGAATGAG...TAGCAGGATGAGGAACCTCAAACTGGGTATCATTTTGCACGTGCTCTTCTGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR CAA 90 bp AGCACGTGCAAAATGATACCCAGTTTGAGGTTCCTCATCCTGCTACTATATTTACTTGTCTCCCAAGGGTaGGTAGCTGACCATTGTGGT +
Preference number: 5 (lower is better)
Translates to: STCKMIPSLRFLILLLYLLVSQG*VADHCG
Trigger: ACCACAATGGTCAGCTACCAACCCTTGGGAGACAAG...TAAATATAGTAGCAGGATGAGGAACCTCAAACTGGGTATCATTTTGCACGTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR CAA 90 bp AGTGGTGTTCACCTTGCATTTTGTGAAGTCGCACAATTCTCAAAGGAAGTTTCTCTTGTCTCCCAAGGGTaGGTAGCTGACCATTGTGGT +
Preference number: 5 (lower is better)
Translates to: SGVHLAFCEVAQFSKEVSLVSQG*VADHCG
Trigger: ACCACAATGGTCAGCTACCAACCCTTGGGAGACAAG...AGAAACTTCCTTTGAGAATTGTGCGACTTCACAAAATGCAAGGTGAACACCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR CAA 90 bp CACGTGCAAAATGATACCCAGTTTGAGGTTCCTCATCCTGCTACTATATTTACACAGGAAGTCAATGTCTaGGTGAGTTGCCGCTGGGTT +
Preference number: 5 (lower is better)
Translates to: HVQNDTQFEVPHPATIFTQEVNV*VSCRWV
Trigger: AACCCAGCGGCAACTCACCAAGACATTGACTTCCTG...TGTAAATATAGTAGCAGGATGAGGAACCTCAAACTGGGTATCATTTTGCACGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR CAA 90 bp ACAATTCTCAAAGGAAGTTTCTCAGTAGGGGGCTTAGCTGAGGGCATGTTCTCTAAAGTGGTGTTCACCTaGCATTTTGTGAAGTCGCAC +
Preference number: 5 (lower is better)
Translates to: TILKGSFSVGGLAEGMFSKVVFT*HFVKSH
Trigger: GTGCGACTTCACAAAATGCAAGGTGAACACCACTTT...AGAGAACATGCCCTCAGCTAAGCCCCCTACTGAGAAACTTCCTTTGAGAATTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR CAA 90 bp AGCACGTGCAAAATGATACCCAGTTTGAGGTTCCTCATCCTGCTACTATATTTACCAACACCTACGATTTaGGCAGCTGGTGACACTCCA +
Preference number: 5 (lower is better)
Translates to: STCKMIPSLRFLILLLYLPTPTI*AAGDTP
Trigger: TGGAGTGTCACCAGCTGCCAAAATCGTAGGTGTTGG...TAAATATAGTAGCAGGATGAGGAACCTCAAACTGGGTATCATTTTGCACGTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR CAA 90 bp TTTCTTTCCTCACATCCTGTGGCAGTATATGAAGTCCATACCATGTATAGGTCTCCAACACCTACGATTTaGGCAGCTGGTGACACTCCA +
Preference number: 5 (lower is better)
Translates to: FLSSHPVAVYEVHTMYRSPTPTI*AAGDTP
Trigger: TGGAGTGTCACCAGCTGCCAAAATCGTAGGTGTTGG...AGACCTATACATGGTATGGACTTCATATACTGCCACAGGATGTGAGGAAAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS-3UTR CAA 90 bp AGAGTAGCAACTACTCCAGTGACCAGCAGAGCCAACACCTACGATTTTGGCAGCTACACAAGTTTATATTaGGTAGGAAGAACAGGTTGC +
Preference number: 5 (lower is better)
Translates to: RVATTPVTSRANTYDFGSYTSLY*VGRTGC
Trigger: GCAACCTGTTCTTCCTACCAAATATAAACTTGTGTA...GCTGCCAAAATCGTAGGTGTTGGCTCTGCTGGTCACTGGAGTAGTTGCTACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR CAA 90 bp CACATAAAGACCATGGCACTGGGAATTTGGGCTAATATTAAAAATAATCTCCCTCTAGTGGGAGAGACTTaGTGGGGAGGAATGGGGAGG +
Preference number: 5 (lower is better)
Translates to: HIKTMALGIWANIKNNLPLVGET*WGGMGR
Trigger: CCTCCCCATTCCTCCCCACAAAGTCTCTCCCACTAG...AGGGAGATTATTTTTAATATTAGCCCAAATTCCCAGTGCCATGGTCTTTATGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS-3UTR CAA 90 bp AAGAGTAGCAACTACTCCAGTGACCAGCAGAGCCAACACCTACGATTTTGGCAGCTGCATATCAATCTATaGTTCTCCAATCAGCACTTG +
Preference number: 5 (lower is better)
Translates to: KSSNYSSDQQSQHLRFWQLHINL*FSNQHL
Trigger: CAAGTGCTGATTGGAGAACAATAGATTGATATGCAG...CTGCCAAAATCGTAGGTGTTGGCTCTGCTGGTCACTGGAGTAGTTGCTACTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS-3UTR CAA 90 bp ATTCAGAAACACCAATTTGGGAACGGTAGTTTGGCACACCTAACTAATAAATACGGGCATTTCTACCCGTaGAAGGGCAGGGCCTTCTCT +
Preference number: 5 (lower is better)
Translates to: IQKHQFGNGSLAHLTNKYGHFYP*KGRAFS
Trigger: AGAGAAGGCCCTGCCCTTCAACGGGTAGAAATGCCC...GTATTTATTAGTTAGGTGTGCCAAACTACCGTTCCCAAATTGGTGTTTCTGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS-3UTR CAA 90 bp CTGAAGAGTAGCAACTACTCCAGTGACCAGCAGAGCCAACACCTACGATTTTGGCTGCTTTCTAATGCTTaGTCTAATGCTTGGCCATTA +
Preference number: 5 (lower is better)
Translates to: LKSSNYSSDQQSQHLRFWLLSNA*SNAWPL
Trigger: TAATGGCCAAGCATTAGACAAAGCATTAGAAAGCAG...CCAAAATCGTAGGTGTTGGCTCTGCTGGTCACTGGAGTAGTTGCTACTCTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS-3UTR CAA 90 bp TGTGGAGGGCATATAGTTAGGAAAGAGAGAGAGAGAGAGAACAGGAACAGATGCCTCCAAATTTTGTGGTaGGTCTGCCAATTCCCAATT +
Preference number: 5 (lower is better)
Translates to: CGGHIVRKERERENRNRCLQILW*VCQFPI
Trigger: AATTGGGAATTGGCAGACCAACCACAAAATTTGGAG...GCATCTGTTCCTGTTCTCTCTCTCTCTCTCTTTCCTAACTATATGCCCTCCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS-3UTR CAA 90 bp ACCTTGCATTTTGTGAAGTCGCACAATTCTCAAAGGAAGTTTCTCAGTAGGGGGGCCATTCCTTTCTCCTaGACTTCTGGGAACATCTTA +
Preference number: 5 (lower is better)
Translates to: TLHFVKSHNSQRKFLSRGAIPFS*TSGNIL
Trigger: TAAGATGTTCCCAGAAGTCAAGGAGAAAGGAATGGC...CCCCCTACTGAGAAACTTCCTTTGAGAATTGTGCGACTTCACAAAATGCAAGGT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR CAA 90 bp AATGCCTCAAAATCTAGGGTGAGAGGCTCATTTCATGGAAGAAAAACAACCACCGAGGCATGCATTTGGTaGCAATTCTGCATCAATCCC +
Preference number: 5 (lower is better)
Translates to: NASKSRVRGSFHGRKTTTEACIW*QFCINP
Trigger: GGGATTGATGCAGAATTGCAACCAAATGCATGCCTC...GGTGGTTGTTTTTCTTCCATGAAATGAGCCTCTCACCCTAGATTTTGAGGCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS-3UTR CAA 90 bp TGTGGAGGGCATATAGTTAGGAAAGAGAGAGAGAGAGAGAACAGGAACAGATGCAAAATGATACCCAGTTaGAGGTTCCTCATCCTGCTA +
Preference number: 5 (lower is better)
Translates to: CGGHIVRKERERENRNRCKMIPS*RFLILL
Trigger: TAGCAGGATGAGGAACCTCAAACTGGGTATCATTTT...GCATCTGTTCCTGTTCTCTCTCTCTCTCTCTTTCCTAACTATATGCCCTCCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS-3UTR CAA 90 bp AAGAGTAGCAACTACTCCAGTGACCAGCAGAGCCAACACCTACGATTTTGGCAGATCTGCCCCCGCAGTTaGTATAACCTATATAAAATA +
Preference number: 5 (lower is better)
Translates to: KSSNYSSDQQSQHLRFWQICPRS*YNLYKI
Trigger: TATTTTATATAGGTTATACAAACTGCGGGGGCAGAT...CTGCCAAAATCGTAGGTGTTGGCTCTGCTGGTCACTGGAGTAGTTGCTACTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS-3UTR CAA 90 bp AGTGGTGTTCACCTTGCATTTTGTGAAGTCGCACAATTCTCAAAGGAAGTTTCTCCACTCAGTTTCCACTaGTGTTTTCGGGACATCAGT +
Preference number: 5 (lower is better)
Translates to: SGVHLAFCEVAQFSKEVSPLSFH*CFRDIS
Trigger: ACTGATGTCCCGAAAACACAAGTGGAAACTGAGTGG...AGAAACTTCCTTTGAGAATTGTGCGACTTCACAAAATGCAAGGTGAACACCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR CAA 90 bp AAGGGGAAGAGAATCTTACTGCCAATGGGATCAATTATTTTAAAGAACTCGCAGACCATGCGGAAGAAATaGACCTTGTCTCCCAAGGGT +
Preference number: 5 (lower is better)
Translates to: KGKRILLPMGSIILKNSQTMRKK*TLSPKG
Trigger: ACCCTTGGGAGACAAGGTCAATTTCTTCCGCATGGT...CTGCGAGTTCTTTAAAATAATTGATCCCATTGGCAGTAAGATTCTCTTCCCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS-3UTR CAA 90 bp TACACCTGTGCCTTCTTTGTCCATATTCTGAAGAGTAGCAACTACTCCAGTGACGAGAAGTGGAACAGCTaGGTGAGCAAGGTTATTATA +
Preference number: 5 (lower is better)
Translates to: YTCAFFVHILKSSNYSSDEKWNS*VSKVII
Trigger: TATAATAACCTTGCTCACCAAGCTGTTCCACTTCTC...GTCACTGGAGTAGTTGCTACTCTTCAGAATATGGACAAAGAAGGCACAGGTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR CAA 90 bp ATTCAGAAACACCAATTTGGGAACGGTAGTTTGGCACACCTAACTAATAAATACGAGATGAAGCCTGGTTaGTCACGCTTGCAGAGTGAG +
Preference number: 5 (lower is better)
Translates to: IQKHQFGNGSLAHLTNKYEMKPG*SRLQSE
Trigger: CTCACTCTGCAAGCGTGACAAACCAGGCTTCATCTC...GTATTTATTAGTTAGGTGTGCCAAACTACCGTTCCCAAATTGGTGTTTCTGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS-3UTR CAA 90 bp ACCTTGCATTTTGTGAAGTCGCACAATTCTCAAAGGAAGTTTCTCAGTAGGGGGCAGATCTTATACTTTTaGCAAATGTCAGCGACAGCT +
Preference number: 5 (lower is better)
Translates to: TLHFVKSHNSQRKFLSRGQILYF*QMSATA
Trigger: AGCTGTCGCTGACATTTGCAAAAAGTATAAGATCTG...CCCCCTACTGAGAAACTTCCTTTGAGAATTGTGCGACTTCACAAAATGCAAGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR CAA 90 bp AGCACGTGCAAAATGATACCCAGTTTGAGGTTCCTCATCCTGCTACTATATTTACTCATTCTCTCTTCATaGTCTTCCAGAGTACGCAAG +
Preference number: 5 (lower is better)
Translates to: STCKMIPSLRFLILLLYLLILSS*SSRVRK
Trigger: CTTGCGTACTCTGGAAGACAATGAAGAGAGAATGAG...TAAATATAGTAGCAGGATGAGGAACCTCAAACTGGGTATCATTTTGCACGTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR CAA 90 bp AATACTTGGATCATACACAAGTTTATATTTGGTAGGAAGAACAGGTTGCCACATCTTGTCTCCCAAGGGTaGGTAGCTGACCATTGTGGT +
Preference number: 5 (lower is better)
Translates to: NTWIIHKFIFGRKNRLPHLVSQG*VADHCG
Trigger: ACCACAATGGTCAGCTACCAACCCTTGGGAGACAAG...ATGTGGCAACCTGTTCTTCCTACCAAATATAAACTTGTGTATGATCCAAGTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR CAA 90 bp AGTGGTGTTCACCTTGCATTTTGTGAAGTCGCACAATTCTCAAAGGAAGTTTCTAAAGTGGTGTTCACCTaGCATTTTGTGAAGTCGCAC +
Preference number: 5 (lower is better)
Translates to: SGVHLAFCEVAQFSKEVSKVVFT*HFVKSH
Trigger: GTGCGACTTCACAAAATGCAAGGTGAACACCACTTT...AGAAACTTCCTTTGAGAATTGTGCGACTTCACAAAATGCAAGGTGAACACCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR CAA 90 bp AGCACGTGCAAAATGATACCCAGTTTGAGGTTCCTCATCCTGCTACTATATTTATTCAGAAACACCAATTaGGGAACGGTAGTTTGGCAC +
Preference number: 5 (lower is better)
Translates to: STCKMIPSLRFLILLLYLFRNTN*GTVVWH
Trigger: GTGCCAAACTACCGTTCCCAAATTGGTGTTTCTGAA...TAAATATAGTAGCAGGATGAGGAACCTCAAACTGGGTATCATTTTGCACGTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR CAA 90 bp GATAATGCCTCAAAATCTAGGGTGAGAGGCTCATTTCATGGAAGAAAAACAACCGTGCTTCATTCCTCTTaGCTCAGGCTGATAAGGTTT +
Preference number: 5 (lower is better)
Translates to: DNASKSRVRGSFHGRKTTVLHSS*LRLIRF
Trigger: AAACCTTATCAGCCTGAGCAAAGAGGAATGAAGCAC...GGTTGTTTTTCTTCCATGAAATGAGCCTCTCACCCTAGATTTTGAGGCATTATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS-3UTR CAA 90 bp AGTGGTGTTCACCTTGCATTTTGTGAAGTCGCACAATTCTCAAAGGAAGTTTCTAATGTTCATAACATCTaGCAGAAACGCCAAAGTGGG +
Preference number: 5 (lower is better)
Translates to: SGVHLAFCEVAQFSKEVSNVHNI*QKRQSG
Trigger: CCCACTTTGGCGTTTCTGCAAGATGTTATGAACATT...AGAAACTTCCTTTGAGAATTGTGCGACTTCACAAAATGCAAGGTGAACACCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR CAA 90 bp AATGCCTCAAAATCTAGGGTGAGAGGCTCATTTCATGGAAGAAAAACAACCACCCAGATCTTATACTTTTaGCAAATGTCAGCGACAGCT +
Preference number: 5 (lower is better)
Translates to: NASKSRVRGSFHGRKTTTQILYF*QMSATA
Trigger: AGCTGTCGCTGACATTTGCAAAAAGTATAAGATCTG...GGTGGTTGTTTTTCTTCCATGAAATGAGCCTCTCACCCTAGATTTTGAGGCATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS-3UTR CAA 90 bp ATTCAGAAACACCAATTTGGGAACGGTAGTTTGGCACACCTAACTAATAAATACCCACTCAGTTTCCACTaGTGTTTTCGGGACATCAGT +
Preference number: 5 (lower is better)
Translates to: IQKHQFGNGSLAHLTNKYPLSFH*CFRDIS
Trigger: ACTGATGTCCCGAAAACACAAGTGGAAACTGAGTGG...GTATTTATTAGTTAGGTGTGCCAAACTACCGTTCCCAAATTGGTGTTTCTGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR CAA 90 bp AGCACGTGCAAAATGATACCCAGTTTGAGGTTCCTCATCCTGCTACTATATTTAGTCATAATGTTTATCTaGCTGAAAGAGGTAGGAGGC +
Preference number: 5 (lower is better)
Translates to: STCKMIPSLRFLILLLYLVIMFI*LKEVGG
Trigger: GCCTCCTACCTCTTTCAGCAAGATAAACATTATGAC...TAAATATAGTAGCAGGATGAGGAACCTCAAACTGGGTATCATTTTGCACGTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR CAA 90 bp CACGTGCAAAATGATACCCAGTTTGAGGTTCCTCATCCTGCTACTATATTTACAAAAATGATACCCAGTTaGAGGTTCCTCATCCTGCTA +
Preference number: 5 (lower is better)
Translates to: HVQNDTQFEVPHPATIFTKMIPS*RFLILL
Trigger: TAGCAGGATGAGGAACCTCAAACTGGGTATCATTTT...TGTAAATATAGTAGCAGGATGAGGAACCTCAAACTGGGTATCATTTTGCACGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR CAA 90 bp AGTGGTGTTCACCTTGCATTTTGTGAAGTCGCACAATTCTCAAAGGAAGTTTCTAAAATGATACCCAGTTaGAGGTTCCTCATCCTGCTA +
Preference number: 5 (lower is better)
Translates to: SGVHLAFCEVAQFSKEVSKMIPS*RFLILL
Trigger: TAGCAGGATGAGGAACCTCAAACTGGGTATCATTTT...AGAAACTTCCTTTGAGAATTGTGCGACTTCACAAAATGCAAGGTGAACACCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR CAA 90 bp AATGCCTCAAAATCTAGGGTGAGAGGCTCATTTCATGGAAGAAAAACAACCACCTTTGGGAACGGTAGTTaGGCACACCTAACTAATAAA +
Preference number: 5 (lower is better)
Translates to: NASKSRVRGSFHGRKTTTFGNGS*AHLTNK
Trigger: TTTATTAGTTAGGTGTGCCAAACTACCGTTCCCAAA...GGTGGTTGTTTTTCTTCCATGAAATGAGCCTCTCACCCTAGATTTTGAGGCATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS-3UTR CAA 90 bp TTTCTTTCCTCACATCCTGTGGCAGTATATGAAGTCCATACCATGTATAGGTCTAATGTTGGGGGAATGTaGATGTCATTCAGAAACACC +
Preference number: 5 (lower is better)
Translates to: FLSSHPVAVYEVHTMYRSNVGGM*MSFRNT
Trigger: GGTGTTTCTGAATGACATCAACATTCCCCCAACATT...AGACCTATACATGGTATGGACTTCATATACTGCCACAGGATGTGAGGAAAGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS-3UTR CAA 90 bp AGTGGTGTTCACCTTGCATTTTGTGAAGTCGCACAATTCTCAAAGGAAGTTTCTAATGTTGGGGGAATGTaGATGTCATTCAGAAACACC +
Preference number: 5 (lower is better)
Translates to: SGVHLAFCEVAQFSKEVSNVGGM*MSFRNT
Trigger: GGTGTTTCTGAATGACATCAACATTCCCCCAACATT...AGAAACTTCCTTTGAGAATTGTGCGACTTCACAAAATGCAAGGTGAACACCACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR CAA 90 bp AGTGGTGTTCACCTTGCATTTTGTGAAGTCGCACAATTCTCAAAGGAAGTTTCTTATAAAGTAACTATTTaGGGTCCCAGTGGTAGGGAG +
Preference number: 5 (lower is better)
Translates to: SGVHLAFCEVAQFSKEVSYKVTI*GPSGRE
Trigger: CTCCCTACCACTGGGACCCAAAATAGTTACTTTATA...AGAAACTTCCTTTGAGAATTGTGCGACTTCACAAAATGCAAGGTGAACACCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS-3UTR CAA 90 bp AAGGGGAAGAGAATCTTACTGCCAATGGGATCAATTATTTTAAAGAACTCGCAGAATGTTCATAACATCTaGCAGAAACGCCAAAGTGGG +
Preference number: 5 (lower is better)
Translates to: KGKRILLPMGSIILKNSQNVHNI*QKRQSG
Trigger: CCCACTTTGGCGTTTCTGCAAGATGTTATGAACATT...CTGCGAGTTCTTTAAAATAATTGATCCCATTGGCAGTAAGATTCTCTTCCCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS-3UTR CAA 90 bp CACGTGCAAAATGATACCCAGTTTGAGGTTCCTCATCCTGCTACTATATTTACAAATTTCCTCCAAATTTaGTGGTTGGTCTGCCAATTC +
Preference number: 5 (lower is better)
Translates to: HVQNDTQFEVPHPATIFTNFLQI*WLVCQF
Trigger: GAATTGGCAGACCAACCACAAAATTTGGAGGAAATT...TGTAAATATAGTAGCAGGATGAGGAACCTCAAACTGGGTATCATTTTGCACGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR CAA 90 bp AACCCATTTGTTTTTCTAGACAGAAAGGGCCCAAAGCCATGTTCATATCAAGTTGTCATAATGTTTATCTaGCTGAAAGAGGTAGGAGGC +
Preference number: 5 (lower is better)
Translates to: NPFVFLDRKGPKPCSYQVVIMFI*LKEVGG
Trigger: GCCTCCTACCTCTTTCAGCAAGATAAACATTATGAC...AACTTGATATGAACATGGCTTTGGGCCCTTTCTGTCTAGAAAAACAAATGGGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS-3UTR CAA 90 bp TATAATCTAGGATCTGTAACTCAAAAGATAAAGCATCCTGGAGTACAGCAGGGTGAGAAGTGGAACAGCTaGGTGAGCAAGGTTATTATA +
Preference number: 5 (lower is better)
Translates to: YNLGSVTQKIKHPGVQQGEKWNS*VSKVII
Trigger: TATAATAACCTTGCTCACCAAGCTGTTCCACTTCTC...ACCCTGCTGTACTCCAGGATGCTTTATCTTTTGAGTTACAGATCCTAGATTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS-3UTR CAA 90 bp AAGGGGAAGAGAATCTTACTGCCAATGGGATCAATTATTTTAAAGAACTCGCAGAGGATGATGTCATTATaGTCCCACAGAGATCTCTTC +
Preference number: 5 (lower is better)
Translates to: KGKRILLPMGSIILKNSQRMMSL*SHRDLF
Trigger: GAAGAGATCTCTGTGGGACAATAATGACATCATCCT...CTGCGAGTTCTTTAAAATAATTGATCCCATTGGCAGTAAGATTCTCTTCCCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS-3UTR CAA 90 bp ATTGGTAACGTCTGTTCTCAGAGACAAAGTGGTGTTCACCTTGCATTTTGTGAAGGGGAAGAAGAGCTATaGTTGTTGCTAGAATTGTTT +
Preference number: 5 (lower is better)
Translates to: IGNVCSQRQSGVHLAFCEGEEEL*LLLELF
Trigger: AAACAATTCTAGCAACAACAATAGCTCTTCTTCCCC...TTCACAAAATGCAAGGTGAACACCACTTTGTCTCTGAGAACAGACGTTACCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS CCA 90 bp TACATTCACACAGTTTGTGACAACTTAATTGTCTACCTAGAGAAGTaGAACAGCTTGGTGAGCAAGGTTATTATAAATCTTGTCCAAGGC +
Preference number: 5 (lower is better)
Translates to: YIHTVCDNLIVYLEK*NSLVSKVIINLVQG
Trigger: GCCTTGGACAAGATTTATAATAACCTTGCTCACCAAGCTGTTCCACTTCTCTAGGTAGACAATTAAGTTGTCACAAACTGTGTGAATGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS-3UTR CAA 90 bp ATACTTGGATCATACACAAGTTTATATTTGGTAGGAAGAACAGGTTGCCACATGAATGTTCATAACATCTaGCAGAAACGCCAAAGTGGG +
Preference number: 5 (lower is better)
Translates to: ILGSYTSLYLVGRTGCHMNVHNI*QKRQSG
Trigger: CCCACTTTGGCGTTTCTGCAAGATGTTATGAACATT...CATGTGGCAACCTGTTCTTCCTACCAAATATAAACTTGTGTATGATCCAAGTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR CAA 90 bp AATACTTGGATCATACACAAGTTTATATTTGGTAGGAAGAACAGGTTGCCACATGTAGGAGGCATGCATTaGGTTGCAATTCTGCATCAA +
Preference number: 5 (lower is better)
Translates to: NTWIIHKFIFGRKNRLPHVGGMH*VAILHQ
Trigger: TTGATGCAGAATTGCAACCAAATGCATGCCTCCTAC...ATGTGGCAACCTGTTCTTCCTACCAAATATAAACTTGTGTATGATCCAAGTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR CAA 90 bp ATACTTGGATCATACACAAGTTTATATTTGGTAGGAAGAACAGGTTGCCACATGGTCATAATGTTTATCTaGCTGAAAGAGGTAGGAGGC +
Preference number: 5 (lower is better)
Translates to: ILGSYTSLYLVGRTGCHMVIMFI*LKEVGG
Trigger: GCCTCCTACCTCTTTCAGCAAGATAAACATTATGAC...CATGTGGCAACCTGTTCTTCCTACCAAATATAAACTTGTGTATGATCCAAGTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR CAA 90 bp ATACTTGGATCATACACAAGTTTATATTTGGTAGGAAGAACAGGTTGCCACATGGAGAAGTGGAACAGCTaGGTGAGCAAGGTTATTATA +
Preference number: 5 (lower is better)
Translates to: ILGSYTSLYLVGRTGCHMEKWNS*VSKVII
Trigger: TATAATAACCTTGCTCACCAAGCTGTTCCACTTCTC...CATGTGGCAACCTGTTCTTCCTACCAAATATAAACTTGTGTATGATCCAAGTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR CAA 90 bp AATACTTGGATCATACACAAGTTTATATTTGGTAGGAAGAACAGGTTGCCACATTTCAGAAACACCAATTaGGGAACGGTAGTTTGGCAC +
Preference number: 5 (lower is better)
Translates to: NTWIIHKFIFGRKNRLPHFRNTN*GTVVWH
Trigger: GTGCCAAACTACCGTTCCCAAATTGGTGTTTCTGAA...ATGTGGCAACCTGTTCTTCCTACCAAATATAAACTTGTGTATGATCCAAGTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR CAA 90 bp AGCACGTGCAAAATGATACCCAGTTTGAGGTTCCTCATCCTGCTACTATATTTATACACAAGTTTATATTaGGTAGGAAGAACAGGTTGC +
Preference number: 5 (lower is better)
Translates to: STCKMIPSLRFLILLLYLYTSLY*VGRTGC
Trigger: GCAACCTGTTCTTCCTACCAAATATAAACTTGTGTA...TAAATATAGTAGCAGGATGAGGAACCTCAAACTGGGTATCATTTTGCACGTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR CAA 90 bp AGGTTCCTCATCCTGCTACTATATTTACACCTGTGCCTTCTTTGTCCATATTCTTTAGAACATAGCCTTTaGTCACGAATTCTTAGAGAG +
Preference number: 5 (lower is better)
Translates to: RFLILLLYLHLCLLCPYSLEHSL*SRILRE
Trigger: CTCTCTAAGAATTCGTGACAAAAGGCTATGTTCTAA...AGAATATGGACAAAGAAGGCACAGGTGTAAATATAGTAGCAGGATGAGGAACCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS-3UTR CAA 90 bp AATACTTGGATCATACACAAGTTTATATTTGGTAGGAAGAACAGGTTGCCACATAATGTTGGGGGAATGTaGATGTCATTCAGAAACACC +
Preference number: 5 (lower is better)
Translates to: NTWIIHKFIFGRKNRLPHNVGGM*MSFRNT
Trigger: GGTGTTTCTGAATGACATCAACATTCCCCCAACATT...ATGTGGCAACCTGTTCTTCCTACCAAATATAAACTTGTGTATGATCCAAGTATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS-3UTR CAA 90 bp TATAATCTAGGATCTGTAACTCAAAAGATAAAGCATCCTGGAGTACAGCAGGGTTACACAAGTTTATATTaGGTAGGAAGAACAGGTTGC +
Preference number: 5 (lower is better)
Translates to: YNLGSVTQKIKHPGVQQGYTSLY*VGRTGC
Trigger: GCAACCTGTTCTTCCTACCAAATATAAACTTGTGTA...ACCCTGCTGTACTCCAGGATGCTTTATCTTTTGAGTTACAGATCCTAGATTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS-3UTR CAA 90 bp TACTATATTTACACCTGTGCCTTCTTTGTCCATATTCTGAAGAGTAGCAACTACGAAGAGCTATTGTTGTaGCTAGAATTGTTTTGCTGG +
Preference number: 5 (lower is better)
Translates to: YYIYTCAFFVHILKSSNYEELLL*LELFCW
Trigger: CCAGCAAAACAATTCTAGCAACAACAATAGCTCTTC...GTAGTTGCTACTCTTCAGAATATGGACAAAGAAGGCACAGGTGTAAATATAGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS-3UTR CAA 90 bp ATTCAGAAACACCAATTTGGGAACGGTAGTTTGGCACACCTAACTAATAAATACGCAACACAGTCAGAATaGATTTCCTTTTCTTTCCTC +
Preference number: 5 (lower is better)
Translates to: IQKHQFGNGSLAHLTNKYATQSE*ISFSFL
Trigger: GAGGAAAGAAAAGGAAATCAATTCTGACTGTGTTGC...GTATTTATTAGTTAGGTGTGCCAAACTACCGTTCCCAAATTGGTGTTTCTGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS TCA 90 bp AAATCAATCACTTTGGTTGATCTATCGAAACTTTTCACCACATACTaGAGTAAAATGTTCATAACATCTTGCAGAAACGCCAAAGTGGGC +
Preference number: 5 (lower is better)
Translates to: KSITLVDLSKLFTTY*SKMFITSCRNAKVG
Trigger: GCCCACTTTGGCGTTTCTGCAAGATGTTATGAACATTTTACTTCAGTATGTGGTGAAAAGTTTCGATAGATCAACCAAAGTGATTGATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259271.7
ENST00000376248.1
ENST00000376261.8
ENST00000428517.2
ENST00000648567.1
CDS GCA 90 bp TGTTTGGCAATGCATCAAAATTTCCTCCAAATTTTGTGGTTGGTCTaGCAATTCCCAATTATATTCTTGGAGAAGCTCATTAGGATAATG +
Preference number: 5 (lower is better)
Translates to: CLAMHQNFLQILWLV*QFPIIFLEKLIRIM
Trigger: CATTATCCTAATGAGCTTCTCCAAGAATATAATTGGGAATTGGCAGACCAACCACAAAATTTGGAGGAAATTTTGATGCATTGCCAAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259271.7
ENST00000376248.1
ENST00000376261.8
ENST00000428517.2
ENST00000648567.1
CDS-3UTR CAA 90 bp AATACTTGGATCATACACAAGTTTATATTTGGTAGGAAGAACAGGTTGCCACATTTTGGGAACGGTAGTTaGGCACACCTAACTAATAAA +
Preference number: 5 (lower is better)
Translates to: NTWIIHKFIFGRKNRLPHFGNGS*AHLTNK
Trigger: TTTATTAGTTAGGTGTGCCAAACTACCGTTCCCAAA...ATGTGGCAACCTGTTCTTCCTACCAAATATAAACTTGTGTATGATCCAAGTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS GCA 72 bp GAGCAGGTCGCCTGCGAGTGCGAGCTGCGGGCGAGCTaGCTCGGGCTTGGCCCTGCGCGCGCGTGCGTGCCC +
Preference number: 6 (lower is better)
Translates to: EQVACECELRAS*LGLGPARACVP
Trigger: GGGCACGCACGCGCGCGCAGGGCCAAGCCCGAGGCAGCTCGCCCGCAGCTCGCACTCGCAGGCGACCTGCTC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259271.7
CDS GCA 72 bp TTTGGAGACTGGAGCAGGTCGCCTGCGAGTGCGAGCTaGGGGCGAGCTGCCTCGGGCTTGGCCCTGCGCGCG +
Preference number: 6 (lower is better)
Translates to: FGDWSRSPASAS*GRAASGLALRA
Trigger: CGCGCGCAGGGCCAAGCCCGAGGCAGCTCGCCCGCAGCTCGCACTCGCAGGCGACCTGCTCCAGTCTCCAAA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259271.7
ENST00000428517.2
CDS CCA 72 bp GCCAGCCGTCATCGATTCAGTGAGCGCACGAGCGCCTaGATCGTCGGCCACCCGCCATCCCAAGGGCCGCGC +
Preference number: 6 (lower is better)
Translates to: ASRHRFSERTSA*IVGHPPSQGPR
Trigger: GCGCGGCCCTTGGGATGGCGGGTGGCCGACGATCCAGGCGCTCGTGCGCTCACTGAATCGATGACGGCTGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376248.1
CDS GCA 72 bp AGATGCCATCGGCTTTGGAGACTGGAGCAGGTCGCCTaGGAGTGCGAGCTGCGGGCGAGCTGCCTCGGGCTT +
Preference number: 6 (lower is better)
Translates to: RCHRLWRLEQVA*ECELRASCLGL
Trigger: AAGCCCGAGGCAGCTCGCCCGCAGCTCGCACTCGCAGGCGACCTGCTCCAGTCTCCAAAGCCGATGGCATCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259271.7
ENST00000428517.2
CDS CCA 72 bp AAGCCAGAGCCCGGAGATGCCATCGGCTTTGGAGACTaGAGCAGGTCGCCTGCGAGTGCGAGCTGCGGGCGA +
Preference number: 6 (lower is better)
Translates to: KPEPGDAIGFGD*SRSPASASCGR
Trigger: TCGCCCGCAGCTCGCACTCGCAGGCGACCTGCTCCAGTCTCCAAAGCCGATGGCATCTCCGGGCTCTGGCTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259271.7
ENST00000428517.2
CDS CAA 90 bp CCGACCCGAAAGACCAAAAGCCAGAGCCCGGAGATGCCATCGGCTTaGGAGACTGGAGCAGGTCGCCTGCGAGTGCGAGCTGCGGGCGAG +
Preference number: 6 (lower is better)
Translates to: PTRKTKSQSPEMPSA*ETGAGRLRVRAAGE
Trigger: CTCGCCCGCAGCTCGCACTCGCAGGCGACCTGCTCCAGTCTCCAAAGCCGATGGCATCTCCGGGCTCTGGCTTTTGGTCTTTCGGGTCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259271.7
ENST00000428517.2
CDS TCA 72 bp GCGCACAGTTTGTTTCCGATGCCGCCCGTGAACTTCTaGGCCACTTGGCACCAGGCTCGCGCTGTGCCGGGA +
Preference number: 6 (lower is better)
Translates to: AHSLFPMPPVNF*ATWHQARAVPG
Trigger: TCCCGGCACAGCGCGAGCCTGGTGCCAAGTGGCTCAGAAGTTCACGGGCGGCATCGGAAACAAACTGTGCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000428517.2
CDS TCA 72 bp AGAGCAGGGCGCACAGTTTGTTTCCGATGCCGCCCGTaGACTTCTGAGCCACTTGGCACCAGGCTCGCGCTG +
Preference number: 6 (lower is better)
Translates to: RAGRTVCFRCRP*TSEPLGTRLAL
Trigger: CAGCGCGAGCCTGGTGCCAAGTGGCTCAGAAGTTCACGGGCGGCATCGGAAACAAACTGTGCGCCCTGCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000428517.2
CDS CCA 72 bp AGACCAAAAGCCAGAGCCCGGAGATGCCATCGGCTTTaGAGACTGGAGCAGGTCGCCTGCGAGTGCGAGCTG +
Preference number: 6 (lower is better)
Translates to: RPKARARRCHRL*RLEQVACECEL
Trigger: CAGCTCGCACTCGCAGGCGACCTGCTCCAGTCTCCAAAGCCGATGGCATCTCCGGGCTCTGGCTTTTGGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259271.7
ENST00000428517.2
CDS TCA 72 bp AGAGCAGGGCGCACAGTTTGTTTCCGATGCCGCCCGTaGACTTCTGAGCCACTTGGCACCAGGCTCGCGCTT +
Preference number: 6 (lower is better)
Translates to: RAGRTVCFRCRP*TSEPLGTRLAL
Trigger: AAGCGCGAGCCTGGTGCCAAGTGGCTCAGAAGTTCACGGGCGGCATCGGAAACAAACTGTGCGCCCTGCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648567.1
CDS GCA 72 bp TTCCGACCCGAAAGACCAAAAGCCAGAGCCCGGAGATaGCATCGGCTTTGGAGACTGGAGCAGGTCGCCTGC +
Preference number: 6 (lower is better)
Translates to: FRPERPKARARR*HRLWRLEQVAC
Trigger: GCAGGCGACCTGCTCCAGTCTCCAAAGCCGATGGCATCTCCGGGCTCTGGCTTTTGGTCTTTCGGGTCGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000428517.2
CDS CAA 72 bp AAGACCAAAAGCCAGAGCCCGGAGATGCCATCGGCTTaGGAGACTGGAGCAGGTCGCCTGCGAGTGCGAGCT +
Preference number: 6 (lower is better)
Translates to: KTKSQSPEMPSA*ETGAGRLRVRA
Trigger: AGCTCGCACTCGCAGGCGACCTGCTCCAGTCTCCAAAGCCGATGGCATCTCCGGGCTCTGGCTTTTGGTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259271.7
ENST00000428517.2
CDS CAA 72 bp TTTGTTTCCGATGCCGCCCGTGAACTTCTGAGCCACTaGGCACCAGGCTCGCGCTGTGCCGGGATTCTCGGA +
Preference number: 6 (lower is better)
Translates to: FVSDAARELLSH*APGSRCAGILG
Trigger: TCCGAGAATCCCGGCACAGCGCGAGCCTGGTGCCAAGTGGCTCAGAAGTTCACGGGCGGCATCGGAAACAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000428517.2
CDS TCA 72 bp GCGCACAGTTTGTTTCCGATGCCGCCCGTGAACTTCTaGGCCACTTGGCACCAGGCTCGCGCTTTCCCATTT +
Preference number: 6 (lower is better)
Translates to: AHSLFPMPPVNF*ATWHQARAFPF
Trigger: AAATGGGAAAGCGCGAGCCTGGTGCCAAGTGGCTCAGAAGTTCACGGGCGGCATCGGAAACAAACTGTGCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648567.1
CDS CAA 72 bp GGAGCCACCTTCGAGAGGCGACTCATTCTCTCTTCATaGTCTTCCAGAGTACGCAAGCTTGGAGGAATGTAC +
Preference number: 6 (lower is better)
Translates to: GATFERRLILSS*SSRVRKLGGMY
Trigger: GTACATTCCTCCAAGCTTGCGTACTCTGGAAGACAATGAAGAGAGAATGAGTCGCCTCTCGAAGGTGGCTCC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS CAA 90 bp GACGTGAAGGCAATGAGCCTGGGAAGAGCAGCCATTCCTTTCTCCTaGACTTCTGGGAACATCTTAAAGCGTGCGATCATCATGGCATAC +
Preference number: 6 (lower is better)
Translates to: DVKAMSLGRAAIPFS*TSGNILKRAIIMAY
Trigger: GTATGCCATGATGATCGCACGCTTTAAGATGTTCCCAGAAGTCAAGGAGAAAGGAATGGCTGCTCTTCCCAGGCTCATTGCCTTCACGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS CAA 90 bp TTAATCACTGGAGCCACCTTCGAGAGGCGACTCATTCTCTCTTCATaGTCTTCCAGAGTACGCAAGCTTGGAGGAATGTACCAGAAGCAG +
Preference number: 6 (lower is better)
Translates to: LITGATFERRLILSS*SSRVRKLGGMYQKQ
Trigger: CTGCTTCTGGTACATTCCTCCAAGCTTGCGTACTCTGGAAGACAATGAAGAGAGAATGAGTCGCCTCTCGAAGGTGGCTCCAGTGATTAA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS CAA 72 bp GACCATGCGGAAGAAATTGACCTTGTCTCCCAAGGGTaGGTAGCTGACCATTGTGGTTCCATACTCCATCAT +
Preference number: 6 (lower is better)
Translates to: DHAEEIDLVSQG*VADHCGSILHH
Trigger: ATGATGGAGTATGGAACCACAATGGTCAGCTACCAACCCTTGGGAGACAAGGTCAATTTCTTCCGCATGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS GCA 72 bp TATAAATACTCTGCCAACTCCAAACATTTATCAACATaGGCTTCAAACCCGGTAGTCCCCTTTGCCCTCCAC +
Preference number: 6 (lower is better)
Translates to: YKYSANSKHLST*ASNPVVPFALH
Trigger: GTGGAGGGCAAAGGGGACTACCGGGTTTGAAGCGCATGTTGATAAATGTTTGGAGTTGGCAGAGTATTTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS CAA 90 bp CAGGTCATAATGTTTATCTTGCTGAAAGAGGTAGGAGGCATGCATTaGGTTGCAATTCTGCATCAATCCCTCTTCTCTAACCAGGAGAGC +
Preference number: 6 (lower is better)
Translates to: QVIMFILLKEVGGMH*VAILHQSLFSNQES
Trigger: GCTCTCCTGGTTAGAGAAGAGGGATTGATGCAGAATTGCAACCAAATGCATGCCTCCTACCTCTTTCAGCAAGATAAACATTATGACCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS CAA 72 bp GTCTCCAGTGTCATAGGACAGGTCATAATGTTTATCTaGCTGAAAGAGGTAGGAGGCATGCATTTGGTTGCA +
Preference number: 6 (lower is better)
Translates to: VSSVIGQVIMFI*LKEVGGMHLVA
Trigger: TGCAACCAAATGCATGCCTCCTACCTCTTTCAGCAAGATAAACATTATGACCTGTCCTATGACACTGGAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS CAA 72 bp ATGTTTATCTTGCTGAAAGAGGTAGGAGGCATGCATTaGGTTGCAATTCTGCATCAATCCCTCTTCTCTAAC +
Preference number: 6 (lower is better)
Translates to: MFILLKEVGGMH*VAILHQSLFSN
Trigger: GTTAGAGAAGAGGGATTGATGCAGAATTGCAACCAAATGCATGCCTCCTACCTCTTTCAGCAAGATAAACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259271.7
ENST00000376261.8
ENST00000648567.1
CDS TCA 72 bp GCTGCTAATCCAACCATATCCAAACCAGTAGAAAGTTaGTTGAAGTATCTAGGATGCCCTGTTTTAATTGCA +
Preference number: 6 (lower is better)
Translates to: AANPTISKPVES*LKYLGCPVLIA
Trigger: TGCAATTAAAACAGGGCATCCTAGATACTTCAATCAACTTTCTACTGGTTTGGATATGGTTGGATTAGCAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259271.7
ENST00000376248.1
ENST00000376261.8
ENST00000648567.1
CDS CCA 72 bp TGGCAATGCATCAAAATTTCCTCCAAATTTTGTGGTTaGTCTGCCAATTCCCAATTATATTCTTGGAGAAGC +
Preference number: 6 (lower is better)
Translates to: WQCIKISSKFCG*SANSQLYSWRS
Trigger: GCTTCTCCAAGAATATAATTGGGAATTGGCAGACCAACCACAAAATTTGGAGGAAATTTTGATGCATTGCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259271.7
ENST00000376248.1
ENST00000376261.8
ENST00000428517.2
ENST00000648567.1
CDS CAA 90 bp ACAGTTTGTGACAACTTAATTGTCTACCTAGAGAAGTGGAACAGCTaGGTGAGCAAGGTTATTATAAATCTTGTCCAAGGCGTTCTATTT +
Preference number: 6 (lower is better)
Translates to: TVCDNLIVYLEKWNS*VSKVIINLVQGVLF
Trigger: AAATAGAACGCCTTGGACAAGATTTATAATAACCTTGCTCACCAAGCTGTTCCACTTCTCTAGGTAGACAATTAAGTTGTCACAAACTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS CCA 72 bp ACAGTTTGTGACAACTTAATTGTCTACCTAGAGAAGTaGAACAGCTTGGTGAGCAAGGTTATTATAAATCTT +
Preference number: 6 (lower is better)
Translates to: TVCDNLIVYLEK*NSLVSKVIINL
Trigger: AAGATTTATAATAACCTTGCTCACCAAGCTGTTCCACTTCTCTAGGTAGACAATTAAGTTGTCACAAACTGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376261.8
CDS CAA 72 bp AGTTGTTTGGCAATGCATCAAAATTTCCTCCAAATTTaGTGGTTGGTCTGCCAATTCCCAATTATATTCTTG +
Preference number: 6 (lower is better)
Translates to: SCLAMHQNFLQI*WLVCQFPIIFL
Trigger: CAAGAATATAATTGGGAATTGGCAGACCAACCACAAAATTTGGAGGAAATTTTGATGCATTGCCAAACAACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259271.7
ENST00000376248.1
ENST00000376261.8
ENST00000428517.2
ENST00000648567.1