RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GAD1 (Homo sapiens)

Ensembl gene IDs: ENSG00000128683

Ensembl transcript IDs: ENST00000344257.9, ENST00000358196.8, ENST00000375272.5, ENST00000414527.6, ENST00000429023.1, ENST00000445006.5, ENST00000454603.5, ENST00000455008.5, ENST00000456864.5, ENST00000462739.1, ENST00000478562.1, ENST00000485013.1, ENST00000486850.1, ENST00000493270.1, ENST00000493875.5, ENST00000625689.2

Found 834 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCCTGGTCACTTTATCTGAGATCTTCAGAAGGTCTTCGGAAATGTTaGCTTAGGTTTCAGCTAAGCGAGTCACAGAGATTGGTCATCAAC +
Preference number: 1 (lower is better)
Translates to: AWSLYLRSSEGLRKC*LRFQLSESQRLVIN
Trigger: GTTGATGACCAATCTCTGTGACTCGCTTAGCTGAAACCTAAGGCAACATTTCCGAAGACCTTCTGAAGATCTCAGATAAAGTGACCAGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
3UTR TCA 90 bp ATTACAGGAGATCTAGTTATTATCCAACAGTTGCTAGAAAAGCATTaGGAACACCAGACGTACAGCCAGACAGAGAGCGTAAGAGAAGAG +
Preference number: 1 (lower is better)
Translates to: ITGDLVIIQQLLEKH*EHQTYSQTESVREE
Trigger: CTCTTCTCTTACGCTCTCTGTCTGGCTGTACGTCTGGTGTTCTCAATGCTTTTCTAGCAACTGTTGGATAATAACTAGATCTCCTGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
3UTR TCA 90 bp GAATTTCCCTTCTTCAAAAACAGTTGTGAGCCTGGTCACTTTATCTaGGATCTTCAGAAGGTCTTCGGAAATGTTGCCTTAGGTTTCAGC +
Preference number: 1 (lower is better)
Translates to: EFPFFKNSCEPGHFI*DLQKVFGNVALGFS
Trigger: GCTGAAACCTAAGGCAACATTTCCGAAGACCTTCTGAAGATCTCAGATAAAGTGACCAGGCTCACAACTGTTTTTGAAGAAGGGAAATTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
3UTR-3UTR GCA 90 bp TGGCCTTGTCCCCTTGGGGCTGGTAGCCAACCATGGTCGTACCTGACTCCATCAAGAATGGCAGAGCACTaGAACAGCACGCCCATCATC +
Preference number: 2 (lower is better)
Translates to: WPCPLGAGSQPWSYLTPSRMAEH*NSTPII
Trigger: GATGATGGGCGTGCTGTTGCAGTGCTCTGCCATTCT...TGATGGAGTCAGGTACGACCATGGTTGGCTACCAGCCCCAAGGGGACAAGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
3UTR-3UTR TCA 90 bp CTGCTTGTCTGGCTGGAAGAGGTATCCTGCACACATCTGGTTGCATCCTTGGAGAGGGTTCCAGGTGACTaGGTTGGCCCTTTCTATGCC +
Preference number: 2 (lower is better)
Translates to: LLVWLEEVSCTHLVASLERVPGD*VGPFYA
Trigger: GGCATAGAAAGGGCCAACTCAGTCACCTGGAACCCT...CTCCAAGGATGCAACCAGATGTGTGCAGGATACCTCTTCCAGCCAGACAAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
3UTR-3UTR TCA 90 bp GAACACCAGACGTACAGCCAGACAGAGAGCGTAAGAGAAGAGCAGATGCTATTTACGTGGCGGCCACACTaGATTGCCTTGTCCCCGGTG +
Preference number: 2 (lower is better)
Translates to: EHQTYSQTESVREEQMLFTWRPH*IALSPV
Trigger: CACCGGGGACAAGGCAATTCAGTGTGGCCGCCACGT...AAATAGCATCTGCTCTTCTCTTACGCTCTCTGTCTGGCTGTACGTCTGGTGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493875.5
ENST00000625689.2
3UTR-3UTR TCA 90 bp CTGAGGCTTTGTGGAATATACCAAAAACAGACGTTTGTGTGCTCAGGCTCGCCAACGTGGCGGCCACACTaGATTGCCTTGTCCCCGGTG +
Preference number: 2 (lower is better)
Translates to: LRLCGIYQKQTFVCSGSPTWRPH*IALSPV
Trigger: CACCGGGGACAAGGCAATTCAGTGTGGCCGCCACGT...TGGCGAGCCTGAGCACACAAACGTCTGTTTTTGGTATATTCCACAAAGCCTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
3UTR-3UTR TCA 90 bp TCATCCATCATCACTTCAGGTGGAGAAACGCTGACAGTGAGGTCGATTCTCACCAGCTTTTCCCGTCGTTaGGGGCTGTCTGGCACACCC +
Preference number: 2 (lower is better)
Translates to: SSIITSGGETLTVRSILTSFSRR*GLSGTP
Trigger: GGGTGTGCCAGACAGCCCTCAACGACGGGAAAAGCT...GGTGAGAATCGACCTCACTGTCAGCGTTTCTCCACCTGAAGTGATGATGGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000493875.5
ENST00000625689.2
3UTR-3UTR TCA 90 bp CTGCTTGTCTGGCTGGAAGAGGTATCCTGCACACATCTGGTTGCATCCTTGGAGTGTGAGGGTTCCAGGTaGCTGAGTTGGCCCTTTCTA +
Preference number: 2 (lower is better)
Translates to: LLVWLEEVSCTHLVASLECEGSR*LSWPFL
Trigger: TAGAAAGGGCCAACTCAGTCACCTGGAACCCTCACA...CTCCAAGGATGCAACCAGATGTGTGCAGGATACCTCTTCCAGCCAGACAAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
3UTR-3UTR TCA 90 bp CCTTGTCCCCTTGGGGCTGGTAGCCAACCATGGTCGTACCTGACTCCATCATCAGTATACCCTTTTCCTTaGCGAGAATGGCAGAGCACT +
Preference number: 2 (lower is better)
Translates to: PCPLGAGSQPWSYLTPSSVYPFP*REWQST
Trigger: AGTGCTCTGCCATTCTCGTCAAGGAAAAGGGTATAC...TGATGATGGAGTCAGGTACGACCATGGTTGGCTACCAGCCCCAAGGGGACAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
3UTR-3UTR CCA 90 bp TGGCCTTGTCCCCTTGGGGCTGGTAGCCAACCATGGTCGTACCTGACTCCATCAAGTTGTTGGACAAGCTaGTTGGCAGCATGTTTAGCT +
Preference number: 2 (lower is better)
Translates to: WPCPLGAGSQPWSYLTPSSCWTS*LAACLA
Trigger: AGCTAAACATGCTGCCAACCAGCTTGTCCAACAACT...TGATGGAGTCAGGTACGACCATGGTTGGCTACCAGCCCCAAGGGGACAAGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000493875.5
ENST00000625689.2
3UTR-3UTR CCA 90 bp TCATCCATCATCACTTCAGGTGGAGAAACGCTGACAGTGAGGTCGATTCTCACCCCATCCGGAAGAAGTTaGCCTTGTCCCCTTGGGGCT +
Preference number: 2 (lower is better)
Translates to: SSIITSGGETLTVRSILTPSGRS*PCPLGA
Trigger: AGCCCCAAGGGGACAAGGCCAACTTCTTCCGGATGG...GGTGAGAATCGACCTCACTGTCAGCGTTTCTCCACCTGAAGTGATGATGGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000493875.5
ENST00000625689.2
3UTR-3UTR TCA 90 bp CCTGAGGCTTTGTGGAATATACCAAAAACAGACGTTTGTGTGCTCAGGCTCGCCAGGGTTCCAGGTGACTaGGTTGGCCCTTTCTATGCC +
Preference number: 2 (lower is better)
Translates to: PEALWNIPKTDVCVLRLARVPGD*VGPFYA
Trigger: GGCATAGAAAGGGCCAACTCAGTCACCTGGAACCCT...GGCGAGCCTGAGCACACAAACGTCTGTTTTTGGTATATTCCACAAAGCCTCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
3UTR-3UTR TCA 90 bp AAAGCATTGAGAACACCAGACGTACAGCCAGACAGAGAGCGTAAGAGAAGAGCACGGCTGGGTTGGAGATaGCCATCCGGAAGAAGTTGG +
Preference number: 2 (lower is better)
Translates to: KALRTPDVQPDRERKRRARLGWR*PSGRSW
Trigger: CCAACTTCTTCCGGATGGTCATCTCCAACCCAGCCG...TGCTCTTCTCTTACGCTCTCTGTCTGGCTGTACGTCTGGTGTTCTCAATGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493875.5
ENST00000625689.2
3UTR-3UTR CCA 90 bp CTGCTTGTCTGGCTGGAAGAGGTATCCTGCACACATCTGGTTGCATCCTTGGAGATGCCGTTGAGTTTATaGCGGTGCTTCCTGGACATG +
Preference number: 2 (lower is better)
Translates to: LLVWLEEVSCTHLVASLEMPLSL*RCFLDM
Trigger: CATGTCCAGGAAGCACCGCCATAAACTCAACGGCAT...CTCCAAGGATGCAACCAGATGTGTGCAGGATACCTCTTCCAGCCAGACAAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414527.6
3UTR-3UTR CCA 90 bp TGGCCTTGTCCCCTTGGGGCTGGTAGCCAACCATGGTCGTACCTGACTCCATCAACCCCTGAGGCTTTGTaGAATATACCAAAAACAGAC +
Preference number: 2 (lower is better)
Translates to: WPCPLGAGSQPWSYLTPSTPEAL*NIPKTD
Trigger: GTCTGTTTTTGGTATATTCCACAAAGCCTCAGGGGT...TGATGGAGTCAGGTACGACCATGGTTGGCTACCAGCCCCAAGGGGACAAGGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
3UTR-3UTR CCA 90 bp GGTCTTCGGAAATGTTGCCTTAGGTTTCAGCTAAGCGAGTCACAGAGATTGGTCCCATCCGGAAGAAGTTaGCCTTGTCCCCTTGGGGCT +
Preference number: 2 (lower is better)
Translates to: GLRKCCLRFQLSESQRLVPSGRS*PCPLGA
Trigger: AGCCCCAAGGGGACAAGGCCAACTTCTTCCGGATGG...GACCAATCTCTGTGACTCGCTTAGCTGAAACCTAAGGCAACATTTCCGAAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000493875.5
ENST00000625689.2
3UTR-3UTR CCA 90 bp GAACACCAGACGTACAGCCAGACAGAGAGCGTAAGAGAAGAGCAGATGCTATTTAGACTGGGTAGCGGCTaGGTTGGAGATGACCATCCG +
Preference number: 2 (lower is better)
Translates to: EHQTYSQTESVREEQMLFRLGSG*VGDDHP
Trigger: CGGATGGTCATCTCCAACCCAGCCGCTACCCAGTCT...AAATAGCATCTGCTCTTCTCTTACGCTCTCTGTCTGGCTGTACGTCTGGTGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493875.5
ENST00000625689.2
3UTR-3UTR TCA 90 bp GGTCGATTCTCACCAACAGCATTTCCCTCGGCCCCTAGGACATGGCGTTTTGAACTGCTGAAGGTAAAGTaGATTCTCTTGGAGCGGGAA +
Preference number: 2 (lower is better)
Translates to: GRFSPTAFPSAPRTWRFELLKVK*ILLERE
Trigger: TTCCCGCTCCAAGAGAATTCACTTTACCTTCAGCAG...TTCAAAACGCCATGTCCTAGGGGCCGAGGGAAATGCTGTTGGTGAGAATCGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
3UTR-3UTR TCA 90 bp CCCCTGAGGCTTTGTGGAATATACCAAAAACAGACGTTTGTGTGCTCAGGCTCGCCCTTTCTATGCCGTTaGGTTTATGGCGGTGCTTCC +
Preference number: 2 (lower is better)
Translates to: PLRLCGIYQKQTFVCSGSPFLCR*VYGGAS
Trigger: GGAAGCACCGCCATAAACTCAACGGCATAGAAAGGG...CGAGCCTGAGCACACAAACGTCTGTTTTTGGTATATTCCACAAAGCCTCAGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000414527.6
3UTR-3UTR TCA 90 bp AAAGCATTGAGAACACCAGACGTACAGCCAGACAGAGAGCGTAAGAGAAGAGCAAGGGTTCCAGGTGACTaGGTTGGCCCTTTCTATGCC +
Preference number: 2 (lower is better)
Translates to: KALRTPDVQPDRERKRRARVPGD*VGPFYA
Trigger: GGCATAGAAAGGGCCAACTCAGTCACCTGGAACCCT...TGCTCTTCTCTTACGCTCTCTGTCTGGCTGTACGTCTGGTGTTCTCAATGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493875.5
ENST00000625689.2
3UTR-3UTR TCA 90 bp TCATCCATCATCACTTCAGGTGGAGAAACGCTGACAGTGAGGTCGATTCTCACCTGTCTGGCACACCCCTaGGGCTTTGTGGAATATACC +
Preference number: 2 (lower is better)
Translates to: SSIITSGGETLTVRSILTCLAHP*GFVEYT
Trigger: GGTATATTCCACAAAGCCTCAGGGGTGTGCCAGACA...GGTGAGAATCGACCTCACTGTCAGCGTTTCTCCACCTGAAGTGATGATGGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493875.5
ENST00000625689.2
3UTR-3UTR CCA 90 bp CACGTGGCGGCCACACTGAATTGCCTTGTCCCCGGTGTCGTAGGAGACATCATATATCCTGCACACATCTaGTTGCATCCTTGGAGTATA +
Preference number: 2 (lower is better)
Translates to: HVAATLNCLVPGVVGDIIYPAHI*LHPWSI
Trigger: TATACTCCAAGGATGCAACCAGATGTGTGCAGGATA...TATGATGTCTCCTACGACACCGGGGACAAGGCAATTCAGTGTGGCCGCCACGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
3UTR-3UTR CCA 90 bp CCTTGTCCCCTTGGGGCTGGTAGCCAACCATGGTCGTACCTGACTCCATCATCAACCCCTGAGGCTTTGTaGAATATACCAAAAACAGAC +
Preference number: 2 (lower is better)
Translates to: PCPLGAGSQPWSYLTPSSTPEAL*NIPKTD
Trigger: GTCTGTTTTTGGTATATTCCACAAAGCCTCAGGGGT...TGATGATGGAGTCAGGTACGACCATGGTTGGCTACCAGCCCCAAGGGGACAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
3UTR CAA 90 bp GTCCATTTTCCTTGGGAGGCCCCTGGAAATTTAGGAGGAAGACCCTaGGAAACCATGTGTGCAGTTACCATCACCTCTGGAGGTCACAAT +
Preference number: 2 (lower is better)
Translates to: VHFPWEAPGNLGGRP*ETMCAVTITSGGHN
Trigger: ATTGTGACCTCCAGAGGTGATGGTAACTGCACACATGGTTTCCAAGGGTCTTCCTCCTAAATTTCCAGGGGCCTCCCAAGGAAAATGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344257.9
ENST00000375272.5
3UTR-3UTR TCA 90 bp AAAGCATTGAGAACACCAGACGTACAGCCAGACAGAGAGCGTAAGAGAAGAGCAACATCAGCCAGAACTTaGAGATATCCACGTGGCGGC +
Preference number: 2 (lower is better)
Translates to: KALRTPDVQPDRERKRRATSART*RYPRGG
Trigger: GCCGCCACGTGGATATCTTCAAGTTCTGGCTGATGT...TGCTCTTCTCTTACGCTCTCTGTCTGGCTGTACGTCTGGTGTTCTCAATGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493875.5
ENST00000625689.2
3UTR-3UTR GCA 90 bp CCCCTGAGGCTTTGTGGAATATACCAAAAACAGACGTTTGTGTGCTCAGGCTCGCTGGAAGAGGTATCCTaGACACATCTGGTTGCATCC +
Preference number: 2 (lower is better)
Translates to: PLRLCGIYQKQTFVCSGSLEEVS*THLVAS
Trigger: GGATGCAACCAGATGTGTGCAGGATACCTCTTCCAG...CGAGCCTGAGCACACAAACGTCTGTTTTTGGTATATTCCACAAAGCCTCAGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
3UTR-3UTR CCA 90 bp AGAACACCAGACGTACAGCCAGACAGAGAGCGTAAGAGAAGAGCAGATGCTATTAAGTCAATGTCAGACTaGGTAGCGGCTGGGTTGGAG +
Preference number: 2 (lower is better)
Translates to: RTPDVQPDRERKRRADAIKSMSD*VAAGLE
Trigger: CTCCAACCCAGCCGCTACCCAGTCTGACATTGACTT...AATAGCATCTGCTCTTCTCTTACGCTCTCTGTCTGGCTGTACGTCTGGTGTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493875.5
ENST00000625689.2
3UTR-3UTR TCA 90 bp GGTCTTCGGAAATGTTGCCTTAGGTTTCAGCTAAGCGAGTCACAGAGATTGGTCGCGGGAAACATGCCGTaGTCTATTACTAAGCCACAC +
Preference number: 2 (lower is better)
Translates to: GLRKCCLRFQLSESQRLVAGNMP*SITKPH
Trigger: GTGTGGCTTAGTAATAGATCACGGCATGTTTCCCGC...GACCAATCTCTGTGACTCGCTTAGCTGAAACCTAAGGCAACATTTCCGAAGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
3UTR-3UTR TCA 90 bp CTGAGGCTTTGTGGAATATACCAAAAACAGACGTTTGTGTGCTCAGGCTCGCCAGCGGGAAACATGCCGTaGTCTATTACTAAGCCACAC +
Preference number: 2 (lower is better)
Translates to: LRLCGIYQKQTFVCSGSPAGNMP*SITKPH
Trigger: GTGTGGCTTAGTAATAGATCACGGCATGTTTCCCGC...TGGCGAGCCTGAGCACACAAACGTCTGTTTTTGGTATATTCCACAAAGCCTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000493875.5
ENST00000625689.2
3UTR-3UTR TCA 90 bp TCATCCATCATCACTTCAGGTGGAGAAACGCTGACAGTGAGGTCGATTCTCACCCTGCTGAAGGTAAAGTaGATTCTCTTGGAGCGGGAA +
Preference number: 2 (lower is better)
Translates to: SSIITSGGETLTVRSILTLLKVK*ILLERE
Trigger: TTCCCGCTCCAAGAGAATTCACTTTACCTTCAGCAG...GGTGAGAATCGACCTCACTGTCAGCGTTTCTCCACCTGAAGTGATGATGGATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
3UTR-3UTR TCA 90 bp ACAATCATTGAAATCATGACACATAGTCTCCCCCTCCCACCACCAAGGTCAGACCTAATGGGGAGGGTGTaGCTTGTCATTTGGTGGTGT +
Preference number: 2 (lower is better)
Translates to: TIIEIMTHSLPLPPPRSDLMGRV*LVIWWC
Trigger: ACACCACCAAATGACAAGTCACACCCTCCCCATTAG...GTCTGACCTTGGTGGTGGGAGGGGGAGACTATGTGTCATGATTTCAATGATTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
3UTR-3UTR TCA 90 bp CGGAAATGTTGCCTTAGGTTTCAGCTAAGCGAGTCACAGAGATTGGTCATCAACTGTGAGGGTTCCAGGTaGCTGAGTTGGCCCTTTCTA +
Preference number: 2 (lower is better)
Translates to: RKCCLRFQLSESQRLVINCEGSR*LSWPFL
Trigger: TAGAAAGGGCCAACTCAGTCACCTGGAACCCTCACA...GTTGATGACCAATCTCTGTGACTCGCTTAGCTGAAACCTAAGGCAACATTTCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493875.5
ENST00000625689.2
3UTR-3UTR TCA 90 bp TCATCCATCATCACTTCAGGTGGAGAAACGCTGACAGTGAGGTCGATTCTCACCCCATCATCAGGGCTTTaGTTTTTGGAGCCACCTTGT +
Preference number: 2 (lower is better)
Translates to: SSIITSGGETLTVRSILTPSSGL*FLEPPC
Trigger: ACAAGGTGGCTCCAAAAATCAAAGCCCTGATGATGG...GGTGAGAATCGACCTCACTGTCAGCGTTTCTCCACCTGAAGTGATGATGGATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000493875.5
ENST00000625689.2
3UTR-3UTR GCA 90 bp CCCCTGAGGCTTTGTGGAATATACCAAAAACAGACGTTTGTGTGCTCAGGCTCGCTGCACACATCTGGTTaGATCCTTGGAGTATACCCT +
Preference number: 2 (lower is better)
Translates to: PLRLCGIYQKQTFVCSGSLHTSG*ILGVYP
Trigger: AGGGTATACTCCAAGGATGCAACCAGATGTGTGCAG...CGAGCCTGAGCACACAAACGTCTGTTTTTGGTATATTCCACAAAGCCTCAGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
3UTR-3UTR GCA 90 bp TCATCCATCATCACTTCAGGTGGAGAAACGCTGACAGTGAGGTCGATTCTCACCCTGCACACATCTGGTTaGATCCTTGGAGTATACCCT +
Preference number: 2 (lower is better)
Translates to: SSIITSGGETLTVRSILTLHTSG*ILGVYP
Trigger: AGGGTATACTCCAAGGATGCAACCAGATGTGTGCAG...GGTGAGAATCGACCTCACTGTCAGCGTTTCTCCACCTGAAGTGATGATGGATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493875.5
ENST00000625689.2
3UTR-3UTR GCA 90 bp AAAGCATTGAGAACACCAGACGTACAGCCAGACAGAGAGCGTAAGAGAAGAGCACTGGAAGAGGTATCCTaGACACATCTGGTTGCATCC +
Preference number: 2 (lower is better)
Translates to: KALRTPDVQPDRERKRRALEEVS*THLVAS
Trigger: GGATGCAACCAGATGTGTGCAGGATACCTCTTCCAG...TGCTCTTCTCTTACGCTCTCTGTCTGGCTGTACGTCTGGTGTTCTCAATGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493875.5
ENST00000625689.2
3UTR-3UTR GCA 90 bp ACAATCATTGAAATCATGACACATAGTCTCCCCCTCCCACCACCAAGGTCAGACTCCCACTGTGCCCTTTaGTTTCCACATCAGCCAGAA +
Preference number: 2 (lower is better)
Translates to: TIIEIMTHSLPLPPPRSDSHCAL*FPHQPE
Trigger: TTCTGGCTGATGTGGAAAGCAAAGGGCACAGTGGGA...GTCTGACCTTGGTGGTGGGAGGGGGAGACTATGTGTCATGATTTCAATGATTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000493875.5
ENST00000625689.2
3UTR-3UTR CCA 90 bp CATACTGCTTGTCTGGCTGGAAGAGGTATCCTGCACACATCTGGTTGCATCCTTTTTTCCTGGAGTTGTTaGACAAGCTGGTTGGCAGCA +
Preference number: 2 (lower is better)
Translates to: HTACLAGRGILHTSGCILFSWSC*TSWLAA
Trigger: TGCTGCCAACCAGCTTGTCCAACAACTCCAGGAAAA...AAGGATGCAACCAGATGTGTGCAGGATACCTCTTCCAGCCAGACAAGCAGTATG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000493875.5
ENST00000625689.2
3UTR-3UTR TCA 90 bp AGAACACCAGACGTACAGCCAGACAGAGAGCGTAAGAGAAGAGCAGATGCTATTCTGCTGAAGGTAAAGTaGATTCTCTTGGAGCGGGAA +
Preference number: 2 (lower is better)
Translates to: RTPDVQPDRERKRRADAILLKVK*ILLERE
Trigger: TTCCCGCTCCAAGAGAATTCACTTTACCTTCAGCAG...AATAGCATCTGCTCTTCTCTTACGCTCTCTGTCTGGCTGTACGTCTGGTGTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
3UTR-3UTR TCA 90 bp CATACTGCTTGTCTGGCTGGAAGAGGTATCCTGCACACATCTGGTTGCATCCTTATAGTGACTCTGTTCTaGGGTGAAGAGGACCAGTTT +
Preference number: 2 (lower is better)
Translates to: HTACLAGRGILHTSGCILIVTLF*GEEDQF
Trigger: AAACTGGTCCTCTTCACCTCAGAACAGAGTCACTAT...AAGGATGCAACCAGATGTGTGCAGGATACCTCTTCCAGCCAGACAAGCAGTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414527.6
3UTR-3UTR TCA 90 bp TCATCCATCATCACTTCAGGTGGAGAAACGCTGACAGTGAGGTCGATTCTCACCGCTCAGGCTCGCCATTaGAAACCATCTCAAATTCTT +
Preference number: 2 (lower is better)
Translates to: SSIITSGGETLTVRSILTAQARH*KPSQIL
Trigger: AAGAATTTGAGATGGTTTTCAATGGCGAGCCTGAGC...GGTGAGAATCGACCTCACTGTCAGCGTTTCTCCACCTGAAGTGATGATGGATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493875.5
ENST00000625689.2
3UTR-3UTR GCA 90 bp CCCCTGAGGCTTTGTGGAATATACCAAAAACAGACGTTTGTGTGCTCAGGCTCGAGTTCCAAAGCCAAGTaGAGCCCCAGCTTTCTTTAT +
Preference number: 2 (lower is better)
Translates to: PLRLCGIYQKQTFVCSGSSSKAK*SPSFLY
Trigger: ATAAAGAAAGCTGGGGCTGCACTTGGCTTTGGAACT...CGAGCCTGAGCACACAAACGTCTGTTTTTGGTATATTCCACAAAGCCTCAGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000414527.6
3UTR-3UTR CCA 90 bp GGAGACATCATACTGCTTGTCTGGCTGGAAGAGGTATCCTGCACACATCTGGTTTATAGAGGTTTGTTCTaGAGTGCCAGAGGGAAAAGG +
Preference number: 2 (lower is better)
Translates to: GDIILLVWLEEVSCTHLVYRGLF*SARGKR
Trigger: CCTTTTCCCTCTGGCACTCCAGAACAAACCTCTATA...AACCAGATGTGTGCAGGATACCTCTTCCAGCCAGACAAGCAGTATGATGTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493875.5
ENST00000625689.2
3UTR-3UTR CCA 90 bp AAAGCATTGAGAACACCAGACGTACAGCCAGACAGAGAGCGTAAGAGAAGAGCATTTTCCTGGAGTTGTTaGACAAGCTGGTTGGCAGCA +
Preference number: 2 (lower is better)
Translates to: KALRTPDVQPDRERKRRAFSWSC*TSWLAA
Trigger: TGCTGCCAACCAGCTTGTCCAACAACTCCAGGAAAA...TGCTCTTCTCTTACGCTCTCTGTCTGGCTGTACGTCTGGTGTTCTCAATGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
3UTR-3UTR CCA 90 bp GAACACCAGACGTACAGCCAGACAGAGAGCGTAAGAGAAGAGCAGATGCTATTTTTTTCCTGGAGTTGTTaGACAAGCTGGTTGGCAGCA +
Preference number: 2 (lower is better)
Translates to: EHQTYSQTESVREEQMLFFSWSC*TSWLAA
Trigger: TGCTGCCAACCAGCTTGTCCAACAACTCCAGGAAAA...AAATAGCATCTGCTCTTCTCTTACGCTCTCTGTCTGGCTGTACGTCTGGTGTTC
48% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
3UTR-3UTR CCA 90 bp GGCATTCCCATAAACTCATGTTCTGCGAAGGATGATTACAGATCCTGGCCCAGTATCATACTGCTTGTCTaGCTGGAAGAGGTATCCTGC +
Preference number: 2 (lower is better)
Translates to: GIPINSCSAKDDYRSWPSIILLV*LEEVSC
Trigger: GCAGGATACCTCTTCCAGCCAGACAAGCAGTATGAT...ACTGGGCCAGGATCTGTAATCATCCTTCGCAGAACATGAGTTTATGGGAATGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493875.5
ENST00000625689.2
3UTR-3UTR TCA 90 bp GAACACCAGACGTACAGCCAGACAGAGAGCGTAAGAGAAGAGCAGATGCTATTTCAATCATTGAAATCATaGCACATAGTCTCCCCCTCC +
Preference number: 2 (lower is better)
Translates to: EHQTYSQTESVREEQMLFQSLKS*HIVSPS
Trigger: GGAGGGGGAGACTATGTGTCATGATTTCAATGATTG...AAATAGCATCTGCTCTTCTCTTACGCTCTCTGTCTGGCTGTACGTCTGGTGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
3UTR-3UTR TCA 90 bp AGAACACCAGACGTACAGCCAGACAGAGAGCGTAAGAGAAGAGCAGATGCTATTCAATCATTGAAATCATaGCACATAGTCTCCCCCTCC +
Preference number: 2 (lower is better)
Translates to: RTPDVQPDRERKRRADAIQSLKS*HIVSPS
Trigger: GGAGGGGGAGACTATGTGTCATGATTTCAATGATTG...AATAGCATCTGCTCTTCTCTTACGCTCTCTGTCTGGCTGTACGTCTGGTGTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
3UTR-3UTR TCA 90 bp AGAACACCAGACGTACAGCCAGACAGAGAGCGTAAGAGAAGAGCAGATGCTATTTTGCTAGAAAAGCATTaGGAACACCAGACGTACAGC +
Preference number: 2 (lower is better)
Translates to: RTPDVQPDRERKRRADAILLEKH*EHQTYS
Trigger: GCTGTACGTCTGGTGTTCTCAATGCTTTTCTAGCAA...AATAGCATCTGCTCTTCTCTTACGCTCTCTGTCTGGCTGTACGTCTGGTGTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
3UTR-3UTR TCA 90 bp GGTCTTCGGAAATGTTGCCTTAGGTTTCAGCTAAGCGAGTCACAGAGATTGGTCTTGCTAGAAAAGCATTaGGAACACCAGACGTACAGC +
Preference number: 2 (lower is better)
Translates to: GLRKCCLRFQLSESQRLVLLEKH*EHQTYS
Trigger: GCTGTACGTCTGGTGTTCTCAATGCTTTTCTAGCAA...GACCAATCTCTGTGACTCGCTTAGCTGAAACCTAAGGCAACATTTCCGAAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
3UTR-3UTR TCA 90 bp AGAACACCAGACGTACAGCCAGACAGAGAGCGTAAGAGAAGAGCAGATGCTATTCCTGGTCACTTTATCTaGGATCTTCAGAAGGTCTTC +
Preference number: 2 (lower is better)
Translates to: RTPDVQPDRERKRRADAIPGHFI*DLQKVF
Trigger: GAAGACCTTCTGAAGATCTCAGATAAAGTGACCAGG...AATAGCATCTGCTCTTCTCTTACGCTCTCTGTCTGGCTGTACGTCTGGTGTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
3UTR-3UTR TCA 90 bp CGGAAATGTTGCCTTAGGTTTCAGCTAAGCGAGTCACAGAGATTGGTCATCAACGTATACCCTTTTCCTTaGCGAGAATGGCAGAGCACT +
Preference number: 2 (lower is better)
Translates to: RKCCLRFQLSESQRLVINVYPFP*REWQST
Trigger: AGTGCTCTGCCATTCTCGTCAAGGAAAAGGGTATAC...GTTGATGACCAATCTCTGTGACTCGCTTAGCTGAAACCTAAGGCAACATTTCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493875.5
ENST00000625689.2
3UTR-3UTR TCA 90 bp CCCCTGAGGCTTTGTGGAATATACCAAAAACAGACGTTTGTGTGCTCAGGCTCGGTTCCAGGCATTTGTTaGTCTGGTTTTCAAATCCCA +
Preference number: 2 (lower is better)
Translates to: PLRLCGIYQKQTFVCSGSVPGIC*SGFQIP
Trigger: TGGGATTTGAAAACCAGATCAACAAATGCCTGGAAC...CGAGCCTGAGCACACAAACGTCTGTTTTTGGTATATTCCACAAAGCCTCAGGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
3UTR-3UTR TCA 90 bp CCTGAGGCTTTGTGGAATATACCAAAAACAGACGTTTGTGTGCTCAGGCTCGCCGTTCCAGGCATTTGTTaGTCTGGTTTTCAAATCCCA +
Preference number: 2 (lower is better)
Translates to: PEALWNIPKTDVCVLRLAVPGIC*SGFQIP
Trigger: TGGGATTTGAAAACCAGATCAACAAATGCCTGGAAC...GGCGAGCCTGAGCACACAAACGTCTGTTTTTGGTATATTCCACAAAGCCTCAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
3UTR-3UTR GCA 90 bp AAAGCATTGAGAACACCAGACGTACAGCCAGACAGAGAGCGTAAGAGAAGAGCATTGGAGCGGGAAACATaGCGTGATCTATTACTAAGC +
Preference number: 2 (lower is better)
Translates to: KALRTPDVQPDRERKRRALERET*RDLLLS
Trigger: GCTTAGTAATAGATCACGGCATGTTTCCCGCTCCAA...TGCTCTTCTCTTACGCTCTCTGTCTGGCTGTACGTCTGGTGTTCTCAATGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
3UTR-3UTR GCA 90 bp ATAAACTCATGTTCTGCGAAGGATGATTACAGATCCTGGCCCAGTCTTTCTATCAGAATGGCAGAGCACTaGAACAGCACGCCCATCATC +
Preference number: 2 (lower is better)
Translates to: INSCSAKDDYRSWPSLSIRMAEH*NSTPII
Trigger: GATGATGGGCGTGCTGTTGCAGTGCTCTGCCATTCT...GATAGAAAGACTGGGCCAGGATCTGTAATCATCCTTCGCAGAACATGAGTTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
3UTR-3UTR GCA 90 bp AGAACACCAGACGTACAGCCAGACAGAGAGCGTAAGAGAAGAGCAGATGCTATTAAACAGACGTTTGTGTaGTCAGGCTCGCCATTGAAA +
Preference number: 2 (lower is better)
Translates to: RTPDVQPDRERKRRADAIKQTFV*SGSPLK
Trigger: TTTCAATGGCGAGCCTGAGCACACAAACGTCTGTTT...AATAGCATCTGCTCTTCTCTTACGCTCTCTGTCTGGCTGTACGTCTGGTGTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493875.5
ENST00000625689.2
3UTR-3UTR CCA 90 bp TGTCCATTTTCCTTGGGAGGCCCCTGGAAATTTAGGAGGAAGACCCTTGGAAACAGTTACCATCACCTCTaGAGGTCACAATCATGCTTT +
Preference number: 2 (lower is better)
Translates to: CPFSLGGPWKFRRKTLGNSYHHL*RSQSCF
Trigger: AAAGCATGATTGTGACCTCCAGAGGTGATGGTAACT...GTTTCCAAGGGTCTTCCTCCTAAATTTCCAGGGGCCTCCCAAGGAAAATGGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344257.9
ENST00000375272.5
3UTR-3UTR CCA 90 bp AAAGCATTGAGAACACCAGACGTACAGCCAGACAGAGAGCGTAAGAGAAGAGCATATAGAGGTTTGTTCTaGAGTGCCAGAGGGAAAAGG +
Preference number: 2 (lower is better)
Translates to: KALRTPDVQPDRERKRRAYRGLF*SARGKR
Trigger: CCTTTTCCCTCTGGCACTCCAGAACAAACCTCTATA...TGCTCTTCTCTTACGCTCTCTGTCTGGCTGTACGTCTGGTGTTCTCAATGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
3UTR-3UTR CCA 90 bp GGTCTTCGGAAATGTTGCCTTAGGTTTCAGCTAAGCGAGTCACAGAGATTGGTCAGTTGTTGGACAAGCTaGTTGGCAGCATGTTTAGCT +
Preference number: 2 (lower is better)
Translates to: GLRKCCLRFQLSESQRLVSCWTS*LAACLA
Trigger: AGCTAAACATGCTGCCAACCAGCTTGTCCAACAACT...GACCAATCTCTGTGACTCGCTTAGCTGAAACCTAAGGCAACATTTCCGAAGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
3UTR-3UTR CCA 90 bp CGGAAATGTTGCCTTAGGTTTCAGCTAAGCGAGTCACAGAGATTGGTCATCAACCATCATCACTTCAGGTaGAGAAACGCTGACAGTGAG +
Preference number: 2 (lower is better)
Translates to: RKCCLRFQLSESQRLVINHHHFR*RNADSE
Trigger: CTCACTGTCAGCGTTTCTCCACCTGAAGTGATGATG...GTTGATGACCAATCTCTGTGACTCGCTTAGCTGAAACCTAAGGCAACATTTCCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
3UTR-3UTR CCA 90 bp CTTAGGTTTCAGCTAAGCGAGTCACAGAGATTGGTCATCAACTACTACAAAATTTCGTTGAGGGCTGTCTaGCACACCCCTGAGGCTTTG +
Preference number: 2 (lower is better)
Translates to: LRFQLSESQRLVINYYKISLRAV*HTPEAL
Trigger: CAAAGCCTCAGGGGTGTGCCAGACAGCCCTCAACGA...AATTTTGTAGTAGTTGATGACCAATCTCTGTGACTCGCTTAGCTGAAACCTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000493875.5
ENST00000625689.2
3UTR-3UTR CCA 90 bp CTTAGGTTTCAGCTAAGCGAGTCACAGAGATTGGTCATCAACTACTACAAAATTAGACTGGGTAGCGGCTaGGTTGGAGATGACCATCCG +
Preference number: 2 (lower is better)
Translates to: LRFQLSESQRLVINYYKIRLGSG*VGDDHP
Trigger: CGGATGGTCATCTCCAACCCAGCCGCTACCCAGTCT...AATTTTGTAGTAGTTGATGACCAATCTCTGTGACTCGCTTAGCTGAAACCTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493875.5
ENST00000625689.2
3UTR-3UTR TCA 90 bp TCATCCATCATCACTTCAGGTGGAGAAACGCTGACAGTGAGGTCGATTCTCACCTATGTTTTCCCTCAATaGAATGGCCTGTGTGTTTCA +
Preference number: 2 (lower is better)
Translates to: SSIITSGGETLTVRSILTYVFPQ*NGLCVS
Trigger: TGAAACACACAGGCCATTTCATTGAGGGAAAACATA...GGTGAGAATCGACCTCACTGTCAGCGTTTCTCCACCTGAAGTGATGATGGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
3UTR-3UTR TCA 90 bp GAACACCAGACGTACAGCCAGACAGAGAGCGTAAGAGAAGAGCAGATGCTATTTCTTCAAAAACAGTTGTaGGCCTGGTCACTTTATCTG +
Preference number: 2 (lower is better)
Translates to: EHQTYSQTESVREEQMLFLQKQL*AWSLYL
Trigger: CAGATAAAGTGACCAGGCTCACAACTGTTTTTGAAG...AAATAGCATCTGCTCTTCTCTTACGCTCTCTGTCTGGCTGTACGTCTGGTGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
3UTR-3UTR GCA 90 bp CGGAAATGTTGCCTTAGGTTTCAGCTAAGCGAGTCACAGAGATTGGTCATCAACTTGGAGCGGGAAACATaGCGTGATCTATTACTAAGC +
Preference number: 2 (lower is better)
Translates to: RKCCLRFQLSESQRLVINLERET*RDLLLS
Trigger: GCTTAGTAATAGATCACGGCATGTTTCCCGCTCCAA...GTTGATGACCAATCTCTGTGACTCGCTTAGCTGAAACCTAAGGCAACATTTCCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
3UTR-3UTR GCA 90 bp CTGAGGCTTTGTGGAATATACCAAAAACAGACGTTTGTGTGCTCAGGCTCGCCACAGGCAGCATCGACATaGAACCAAAGGTTATATTTC +
Preference number: 2 (lower is better)
Translates to: LRLCGIYQKQTFVCSGSPQAAST*NQRLYF
Trigger: GAAATATAACCTTTGGTTGCATGTCGATGCTGCCTG...TGGCGAGCCTGAGCACACAAACGTCTGTTTTTGGTATATTCCACAAAGCCTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414527.6
3UTR-3UTR TCA 90 bp CTGAGGCTTTGTGGAATATACCAAAAACAGACGTTTGTGTGCTCAGGCTCGCCATATGTTTTCCCTCAATaGAATGGCCTGTGTGTTTCA +
Preference number: 2 (lower is better)
Translates to: LRLCGIYQKQTFVCSGSPYVFPQ*NGLCVS
Trigger: TGAAACACACAGGCCATTTCATTGAGGGAAAACATA...TGGCGAGCCTGAGCACACAAACGTCTGTTTTTGGTATATTCCACAAAGCCTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000493875.5
ENST00000625689.2
3UTR-3UTR TCA 90 bp ATAAACTCATGTTCTGCGAAGGATGATTACAGATCCTGGCCCAGTCTTTCTATCCCATCATCAGGGCTTTaGTTTTTGGAGCCACCTTGT +
Preference number: 2 (lower is better)
Translates to: INSCSAKDDYRSWPSLSIPSSGL*FLEPPC
Trigger: ACAAGGTGGCTCCAAAAATCAAAGCCCTGATGATGG...GATAGAAAGACTGGGCCAGGATCTGTAATCATCCTTCGCAGAACATGAGTTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
3UTR-3UTR CCA 90 bp AAAGAATATGTCCATTTTCCTTGGGAGGCCCCTGGAAATTTAGGAGGAAGACCCAGTTACCATCACCTCTaGAGGTCACAATCATGCTTT +
Preference number: 2 (lower is better)
Translates to: KEYVHFPWEAPGNLGGRPSYHHL*RSQSCF
Trigger: AAAGCATGATTGTGACCTCCAGAGGTGATGGTAACT...GGGTCTTCCTCCTAAATTTCCAGGGGCCTCCCAAGGAAAATGGACATATTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344257.9
ENST00000375272.5
3UTR-3UTR CCA 90 bp GGTCTTCGGAAATGTTGCCTTAGGTTTCAGCTAAGCGAGTCACAGAGATTGGTCAGGCATTTGTTGATCTaGTTTTCAAATCCCACTGTG +
Preference number: 2 (lower is better)
Translates to: GLRKCCLRFQLSESQRLVRHLLI*FSNPTV
Trigger: CACAGTGGGATTTGAAAACCAGATCAACAAATGCCT...GACCAATCTCTGTGACTCGCTTAGCTGAAACCTAAGGCAACATTTCCGAAGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493875.5
ENST00000625689.2
3UTR-3UTR TCA 90 bp GAACACCAGACGTACAGCCAGACAGAGAGCGTAAGAGAAGAGCAGATGCTATTTCTAAAACGCACAGTGTaGATTTCCCTTCTTCAAAAA +
Preference number: 2 (lower is better)
Translates to: EHQTYSQTESVREEQMLFLKRTV*ISLLQK
Trigger: TTTTTGAAGAAGGGAAATTCACACTGTGCGTTTTAG...AAATAGCATCTGCTCTTCTCTTACGCTCTCTGTCTGGCTGTACGTCTGGTGTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
3UTR-3UTR GCA 90 bp ATAAACTCATGTTCTGCGAAGGATGATTACAGATCCTGGCCCAGTCTTTCTATCAGTCGTGCCAGCAGTTaGATTGACATAAAAGGGAAC +
Preference number: 2 (lower is better)
Translates to: INSCSAKDDYRSWPSLSISRASS*IDIKGN
Trigger: GTTCCCTTTTATGTCAATGCAACTGCTGGCACGACT...GATAGAAAGACTGGGCCAGGATCTGTAATCATCCTTCGCAGAACATGAGTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414527.6
3UTR-3UTR GCA 90 bp ATAAACTCATGTTCTGCGAAGGATGATTACAGATCCTGGCCCAGTCTTTCTATCAAACAGACGTTTGTGTaGTCAGGCTCGCCATTGAAA +
Preference number: 2 (lower is better)
Translates to: INSCSAKDDYRSWPSLSIKQTFV*SGSPLK
Trigger: TTTCAATGGCGAGCCTGAGCACACAAACGTCTGTTT...GATAGAAAGACTGGGCCAGGATCTGTAATCATCCTTCGCAGAACATGAGTTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
3UTR-3UTR TCA 90 bp GCTTTGTGGAATATACCAAAAACAGACGTTTGTGTGCTCAGGCTCGCCATTGAATATGTTTTCCCTCAATaGAATGGCCTGTGTGTTTCA +
Preference number: 2 (lower is better)
Translates to: ALWNIPKTDVCVLRLAIEYVFPQ*NGLCVS
Trigger: TGAAACACACAGGCCATTTCATTGAGGGAAAACATA...TTCAATGGCGAGCCTGAGCACACAAACGTCTGTTTTTGGTATATTCCACAAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000493875.5
ENST00000625689.2
3UTR-3UTR CCA 90 bp CTTAGGTTTCAGCTAAGCGAGTCACAGAGATTGGTCATCAACTACTACAAAATTCATCATCACTTCAGGTaGAGAAACGCTGACAGTGAG +
Preference number: 2 (lower is better)
Translates to: LRFQLSESQRLVINYYKIHHHFR*RNADSE
Trigger: CTCACTGTCAGCGTTTCTCCACCTGAAGTGATGATG...AATTTTGTAGTAGTTGATGACCAATCTCTGTGACTCGCTTAGCTGAAACCTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
3UTR CAA 90 bp AATTACAGGAGATCTAGTTATTATCCAACAGTTGCTAGAAAAGCATaGAGAACACCAGACGTACAGCCAGACAGAGAGCGTAAGAGAAGA +
Preference number: 2 (lower is better)
Translates to: NYRRSSYYPTVARKA*RTPDVQPDRERKRR
Trigger: TCTTCTCTTACGCTCTCTGTCTGGCTGTACGTCTGGTGTTCTCAATGCTTTTCTAGCAACTGTTGGATAATAACTAGATCTCCTGTAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
3UTR-3UTR GCA 90 bp TTTGTGTGCTCAGGCTCGCCATTGAAAACCATCTCAAATTCTTCTCTGTTTTTATTGGAGCGGGAAACATaGCGTGATCTATTACTAAGC +
Preference number: 2 (lower is better)
Translates to: FVCSGSPLKTISNSSLFLLERET*RDLLLS
Trigger: GCTTAGTAATAGATCACGGCATGTTTCCCGCTCCAA...TAAAAACAGAGAAGAATTTGAGATGGTTTTCAATGGCGAGCCTGAGCACACAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000493875.5
ENST00000625689.2
3UTR-3UTR CCA 90 bp CTTAGGTTTCAGCTAAGCGAGTCACAGAGATTGGTCATCAACTACTACAAAATTTATAGAGGTTTGTTCTaGAGTGCCAGAGGGAAAAGG +
Preference number: 2 (lower is better)
Translates to: LRFQLSESQRLVINYYKIYRGLF*SARGKR
Trigger: CCTTTTCCCTCTGGCACTCCAGAACAAACCTCTATA...AATTTTGTAGTAGTTGATGACCAATCTCTGTGACTCGCTTAGCTGAAACCTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
3UTR-3UTR CCA 90 bp CGGAAATGTTGCCTTAGGTTTCAGCTAAGCGAGTCACAGAGATTGGTCATCAACGACGCCTCTTTAACATaGTACATCTCTGAATATAAA +
Preference number: 2 (lower is better)
Translates to: RKCCLRFQLSESQRLVINDASLT*YISEYK
Trigger: TTTATATTCAGAGATGTACCATGTTAAAGAGGCGTC...GTTGATGACCAATCTCTGTGACTCGCTTAGCTGAAACCTAAGGCAACATTTCCG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
3UTR-3UTR GCA 90 bp GCTTTGTGGAATATACCAAAAACAGACGTTTGTGTGCTCAGGCTCGCCATTGAATTTCTCACATATATCTaGAATCTCTTGTATCGGATC +
Preference number: 2 (lower is better)
Translates to: ALWNIPKTDVCVLRLAIEFLTYI*NLLYRI
Trigger: GATCCGATACAAGAGATTGCAGATATATGTGAGAAA...TTCAATGGCGAGCCTGAGCACACAAACGTCTGTTTTTGGTATATTCCACAAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414527.6
3UTR CAA 90 bp CTTCGGAAATGTTGCCTTAGGTTTCAGCTAAGCGAGTCACAGAGATaGGTCATCAACTACTACAAAATTACAGGAGATCTAGTTATTATC +
Preference number: 2 (lower is better)
Translates to: LRKCCLRFQLSESQR*VINYYKITGDLVII
Trigger: GATAATAACTAGATCTCCTGTAATTTTGTAGTAGTTGATGACCAATCTCTGTGACTCGCTTAGCTGAAACCTAAGGCAACATTTCCGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
3UTR-3UTR CCA 90 bp ATAAACTCATGTTCTGCGAAGGATGATTACAGATCCTGGCCCAGTCTTTCTATCGACGCCTCTTTAACATaGTACATCTCTGAATATAAA +
Preference number: 2 (lower is better)
Translates to: INSCSAKDDYRSWPSLSIDASLT*YISEYK
Trigger: TTTATATTCAGAGATGTACCATGTTAAAGAGGCGTC...GATAGAAAGACTGGGCCAGGATCTGTAATCATCCTTCGCAGAACATGAGTTTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493875.5
ENST00000625689.2
3UTR-3UTR CAA 90 bp TTGGAGCCACCTTGTGTAGCTTTTCCCGTCGTTGAGGGCTGTCTGGCACACCCCGCAACATATAGAGGTTaGTTCTGGAGTGCCAGAGGG +
Preference number: 3 (lower is better)
Translates to: LEPPCVAFPVVEGCLAHPATYRG*FWSARG
Trigger: CCCTCTGGCACTCCAGAACAAACCTCTATATGTTGC...GGGGTGTGCCAGACAGCCCTCAACGACGGGAAAAGCTACACAAGGTGGCTCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000493875.5
ENST00000625689.2
3UTR-3UTR CAA 90 bp TGGCCTTGTCCCCTTGGGGCTGGTAGCCAACCATGGTCGTACCTGACTCCATCAACCAAAAACAGACGTTaGTGTGCTCAGGCTCGCCAT +
Preference number: 3 (lower is better)
Translates to: WPCPLGAGSQPWSYLTPSTKNRR*CAQARH
Trigger: ATGGCGAGCCTGAGCACACAAACGTCTGTTTTTGGT...TGATGGAGTCAGGTACGACCATGGTTGGCTACCAGCCCCAAGGGGACAAGGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
3UTR-3UTR CAA 90 bp TGGCCTTGTCCCCTTGGGGCTGGTAGCCAACCATGGTCGTACCTGACTCCATCAATTTTTGGAGCCACCTaGTGTAGCTTTTCCCGTCGT +
Preference number: 3 (lower is better)
Translates to: WPCPLGAGSQPWSYLTPSIFGAT*CSFSRR
Trigger: ACGACGGGAAAAGCTACACAAGGTGGCTCCAAAAAT...TGATGGAGTCAGGTACGACCATGGTTGGCTACCAGCCCCAAGGGGACAAGGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
3UTR CCA 72 bp GTCCCCGGTGTCGTAGGAGACATCATACTGCTTGTCTaGCTGGAAGAGGTATCCTGCACACATCTGGTTGCA +
Preference number: 3 (lower is better)
Translates to: VPGVVGDIILLV*LEEVSCTHLVA
Trigger: TGCAACCAGATGTGTGCAGGATACCTCTTCCAGCCAGACAAGCAGTATGATGTCTCCTACGACACCGGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
3UTR-3UTR CAA 90 bp GGTCGATTCTCACCAACAGCATTTCCCTCGGCCCCTAGGACATGGCGTTTTGAAGCAACATATAGAGGTTaGTTCTGGAGTGCCAGAGGG +
Preference number: 3 (lower is better)
Translates to: GRFSPTAFPSAPRTWRFEATYRG*FWSARG
Trigger: CCCTCTGGCACTCCAGAACAAACCTCTATATGTTGC...TTCAAAACGCCATGTCCTAGGGGCCGAGGGAAATGCTGTTGGTGAGAATCGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
3UTR-3UTR CAA 90 bp TGGCCTTGTCCCCTTGGGGCTGGTAGCCAACCATGGTCGTACCTGACTCCATCAGCCAGTTCCAGGCATTaGTTGATCTGGTTTTCAAAT +
Preference number: 3 (lower is better)
Translates to: WPCPLGAGSQPWSYLTPSASSRH*LIWFSN
Trigger: ATTTGAAAACCAGATCAACAAATGCCTGGAACTGGC...TGATGGAGTCAGGTACGACCATGGTTGGCTACCAGCCCCAAGGGGACAAGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
3UTR-3UTR CAA 90 bp CCTGAGGCTTTGTGGAATATACCAAAAACAGACGTTTGTGTGCTCAGGCTCGCCCACATCAGCCAGAACTaGAAGATATCCACGTGGCGG +
Preference number: 3 (lower is better)
Translates to: PEALWNIPKTDVCVLRLAHISQN*KISTWR
Trigger: CCGCCACGTGGATATCTTCAAGTTCTGGCTGATGTG...GGCGAGCCTGAGCACACAAACGTCTGTTTTTGGTATATTCCACAAAGCCTCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
3UTR CCA 72 bp TCGTTGAGGGCTGTCTGGCACACCCCTGAGGCTTTGTaGAATATACCAAAAACAGACGTTTGTGTGCTCAGG +
Preference number: 3 (lower is better)
Translates to: SLRAVWHTPEAL*NIPKTDVCVLR
Trigger: CCTGAGCACACAAACGTCTGTTTTTGGTATATTCCACAAAGCCTCAGGGGTGTGCCAGACAGCCCTCAACGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
3UTR-3UTR CAA 90 bp GGAGACATCATACTGCTTGTCTGGCTGGAAGAGGTATCCTGCACACATCTGGTTTGTTGGACAAGCTGGTaGGCAGCATGTTTAGCTCCT +
Preference number: 3 (lower is better)
Translates to: GDIILLVWLEEVSCTHLVCWTSW*AACLAP
Trigger: AGGAGCTAAACATGCTGCCAACCAGCTTGTCCAACA...AACCAGATGTGTGCAGGATACCTCTTCCAGCCAGACAAGCAGTATGATGTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493875.5
ENST00000625689.2
3UTR-3UTR CAA 90 bp GAACACCAGACGTACAGCCAGACAGAGAGCGTAAGAGAAGAGCAGATGCTATTTGTTTTCCTGGAGTTGTaGGACAAGCTGGTTGGCAGC +
Preference number: 3 (lower is better)
Translates to: EHQTYSQTESVREEQMLFVFLEL*DKLVGS
Trigger: GCTGCCAACCAGCTTGTCCAACAACTCCAGGAAAAC...AAATAGCATCTGCTCTTCTCTTACGCTCTCTGTCTGGCTGTACGTCTGGTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
3UTR-3UTR CAA 90 bp ACAATCATTGAAATCATGACACATAGTCTCCCCCTCCCACCACCAAGGTCAGACGTTTTCCTGGAGTTGTaGGACAAGCTGGTTGGCAGC +
Preference number: 3 (lower is better)
Translates to: TIIEIMTHSLPLPPPRSDVFLEL*DKLVGS
Trigger: GCTGCCAACCAGCTTGTCCAACAACTCCAGGAAAAC...GTCTGACCTTGGTGGTGGGAGGGGGAGACTATGTGTCATGATTTCAATGATTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
3UTR-3UTR CAA 90 bp CCTTGTCCCCTTGGGGCTGGTAGCCAACCATGGTCGTACCTGACTCCATCATCATGGCTTCAAGAATTTTaGCCTCAAAATCAGCTGGAA +
Preference number: 3 (lower is better)
Translates to: PCPLGAGSQPWSYLTPSSWLQEF*PQNQLE
Trigger: TTCCAGCTGATTTTGAGGCAAAAATTCTTGAAGCCA...TGATGATGGAGTCAGGTACGACCATGGTTGGCTACCAGCCCCAAGGGGACAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000414527.6
3UTR-3UTR CAA 90 bp CCTTGTCCCCTTGGGGCTGGTAGCCAACCATGGTCGTACCTGACTCCATCATCATATATCTGCAATCTCTaGTATCGGATCAAAAGCTCC +
Preference number: 3 (lower is better)
Translates to: PCPLGAGSQPWSYLTPSSYICNL*YRIKSS
Trigger: GGAGCTTTTGATCCGATACAAGAGATTGCAGATATA...TGATGATGGAGTCAGGTACGACCATGGTTGGCTACCAGCCCCAAGGGGACAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000414527.6
3UTR-3UTR CAA 90 bp GGCATTCCCATAAACTCATGTTCTGCGAAGGATGATTACAGATCCTGGCCCAGTTTCCAGGTGACTGAGTaGGCCCTTTCTATGCCGTTG +
Preference number: 3 (lower is better)
Translates to: GIPINSCSAKDDYRSWPSFQVTE*ALSMPL
Trigger: CAACGGCATAGAAAGGGCCAACTCAGTCACCTGGAA...ACTGGGCCAGGATCTGTAATCATCCTTCGCAGAACATGAGTTTATGGGAATGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493875.5
ENST00000625689.2
3UTR-3UTR CAA 90 bp ATAAACTCATGTTCTGCGAAGGATGATTACAGATCCTGGCCCAGTCTTTCTATCGTTGGCCTTGTCCCCTaGGGGCTGGTAGCCAACCAT +
Preference number: 3 (lower is better)
Translates to: INSCSAKDDYRSWPSLSIVGLVP*GLVANH
Trigger: ATGGTTGGCTACCAGCCCCAAGGGGACAAGGCCAAC...GATAGAAAGACTGGGCCAGGATCTGTAATCATCCTTCGCAGAACATGAGTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
3UTR CCA 72 bp ACCCTTGGAAACCATGTGTGCAGTTACCATCACCTCTaGAGGTCACAATCATGCTTTGGTTCTGCTCTGAGC +
Preference number: 3 (lower is better)
Translates to: TLGNHVCSYHHL*RSQSCFGSALS
Trigger: GCTCAGAGCAGAACCAAAGCATGATTGTGACCTCCAGAGGTGATGGTAACTGCACACATGGTTTCCAAGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344257.9
ENST00000375272.5
3UTR-3UTR CAA 90 bp GGTCTTCGGAAATGTTGCCTTAGGTTTCAGCTAAGCGAGTCACAGAGATTGGTCTGTTGGACAAGCTGGTaGGCAGCATGTTTAGCTCCT +
Preference number: 3 (lower is better)
Translates to: GLRKCCLRFQLSESQRLVCWTSW*AACLAP
Trigger: AGGAGCTAAACATGCTGCCAACCAGCTTGTCCAACA...GACCAATCTCTGTGACTCGCTTAGCTGAAACCTAAGGCAACATTTCCGAAGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
3UTR-3UTR CAA 90 bp CTGCTTGTCTGGCTGGAAGAGGTATCCTGCACACATCTGGTTGCATCCTTGGAGCTAGGACATGGCGTTTaGAAAAACAGTTTTCCTGGA +
Preference number: 3 (lower is better)
Translates to: LLVWLEEVSCTHLVASLELGHGV*KNSFPG
Trigger: TCCAGGAAAACTGTTTTTCAAAACGCCATGTCCTAG...CTCCAAGGATGCAACCAGATGTGTGCAGGATACCTCTTCCAGCCAGACAAGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000493875.5
ENST00000625689.2
3UTR-3UTR CAA 90 bp CCTGAGGCTTTGTGGAATATACCAAAAACAGACGTTTGTGTGCTCAGGCTCGCCTGGGGAGGGTGTGACTaGTCATTTGGTGGTGTTTTT +
Preference number: 3 (lower is better)
Translates to: PEALWNIPKTDVCVLRLAWGGCD*SFGGVF
Trigger: AAAAACACCACCAAATGACAAGTCACACCCTCCCCA...GGCGAGCCTGAGCACACAAACGTCTGTTTTTGGTATATTCCACAAAGCCTCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000493875.5
ENST00000625689.2
3UTR-3UTR CAA 90 bp GGAGACATCATACTGCTTGTCTGGCTGGAAGAGGTATCCTGCACACATCTGGTTAGTATACCCTTTTCCTaGACGAGAATGGCAGAGCAC +
Preference number: 3 (lower is better)
Translates to: GDIILLVWLEEVSCTHLVSIPFS*TRMAEH
Trigger: GTGCTCTGCCATTCTCGTCAAGGAAAAGGGTATACT...AACCAGATGTGTGCAGGATACCTCTTCCAGCCAGACAAGCAGTATGATGTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
3UTR-3UTR CAA 90 bp CATACTGCTTGTCTGGCTGGAAGAGGTATCCTGCACACATCTGGTTGCATCCTTAGTATACCCTTTTCCTaGACGAGAATGGCAGAGCAC +
Preference number: 3 (lower is better)
Translates to: HTACLAGRGILHTSGCILSIPFS*TRMAEH
Trigger: GTGCTCTGCCATTCTCGTCAAGGAAAAGGGTATACT...AAGGATGCAACCAGATGTGTGCAGGATACCTCTTCCAGCCAGACAAGCAGTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
3UTR GCA 72 bp GACATCATACTGCTTGTCTGGCTGGAAGAGGTATCCTaGACACATCTGGTTGCATCCTTGGAGTATACCCTT +
Preference number: 3 (lower is better)
Translates to: DIILLVWLEEVS*THLVASLEYTL
Trigger: AAGGGTATACTCCAAGGATGCAACCAGATGTGTGCAGGATACCTCTTCCAGCCAGACAAGCAGTATGATGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
3UTR-3UTR CAA 90 bp CGGAAATGTTGCCTTAGGTTTCAGCTAAGCGAGTCACAGAGATTGGTCATCAACGCAACATATAGAGGTTaGTTCTGGAGTGCCAGAGGG +
Preference number: 3 (lower is better)
Translates to: RKCCLRFQLSESQRLVINATYRG*FWSARG
Trigger: CCCTCTGGCACTCCAGAACAAACCTCTATATGTTGC...GTTGATGACCAATCTCTGTGACTCGCTTAGCTGAAACCTAAGGCAACATTTCCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
3UTR-3UTR CAA 90 bp AAAGCATTGAGAACACCAGACGTACAGCCAGACAGAGAGCGTAAGAGAAGAGCATGGGGAGGGTGTGACTaGTCATTTGGTGGTGTTTTT +
Preference number: 3 (lower is better)
Translates to: KALRTPDVQPDRERKRRAWGGCD*SFGGVF
Trigger: AAAAACACCACCAAATGACAAGTCACACCCTCCCCA...TGCTCTTCTCTTACGCTCTCTGTCTGGCTGTACGTCTGGTGTTCTCAATGCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
3UTR-3UTR CAA 90 bp TCATCCATCATCACTTCAGGTGGAGAAACGCTGACAGTGAGGTCGATTCTCACCGTTGCTAGAAAAGCATaGAGAACACCAGACGTACAG +
Preference number: 3 (lower is better)
Translates to: SSIITSGGETLTVRSILTVARKA*RTPDVQ
Trigger: CTGTACGTCTGGTGTTCTCAATGCTTTTCTAGCAAC...GGTGAGAATCGACCTCACTGTCAGCGTTTCTCCACCTGAAGTGATGATGGATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
3UTR-3UTR CAA 90 bp AAAGCATTGAGAACACCAGACGTACAGCCAGACAGAGAGCGTAAGAGAAGAGCAAGTATACCCTTTTCCTaGACGAGAATGGCAGAGCAC +
Preference number: 3 (lower is better)
Translates to: KALRTPDVQPDRERKRRASIPFS*TRMAEH
Trigger: GTGCTCTGCCATTCTCGTCAAGGAAAAGGGTATACT...TGCTCTTCTCTTACGCTCTCTGTCTGGCTGTACGTCTGGTGTTCTCAATGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493875.5
ENST00000625689.2
3UTR-3UTR CAA 90 bp ACAATCATTGAAATCATGACACATAGTCTCCCCCTCCCACCACCAAGGTCAGACTCCATCATCAGGGCTTaGATTTTTGGAGCCACCTTG +
Preference number: 3 (lower is better)
Translates to: TIIEIMTHSLPLPPPRSDSIIRA*IFGATL
Trigger: CAAGGTGGCTCCAAAAATCAAAGCCCTGATGATGGA...GTCTGACCTTGGTGGTGGGAGGGGGAGACTATGTGTCATGATTTCAATGATTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000493875.5
ENST00000625689.2
3UTR-3UTR CAA 90 bp ATAAACTCATGTTCTGCGAAGGATGATTACAGATCCTGGCCCAGTCTTTCTATCGTTTTCCTGGAGTTGTaGGACAAGCTGGTTGGCAGC +
Preference number: 3 (lower is better)
Translates to: INSCSAKDDYRSWPSLSIVFLEL*DKLVGS
Trigger: GCTGCCAACCAGCTTGTCCAACAACTCCAGGAAAAC...GATAGAAAGACTGGGCCAGGATCTGTAATCATCCTTCGCAGAACATGAGTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493875.5
ENST00000625689.2
3UTR-3UTR CAA 90 bp ATAAACTCATGTTCTGCGAAGGATGATTACAGATCCTGGCCCAGTCTTTCTATCGCCCTTTCTATGCCGTaGAGTTTATGGCGGTGCTTC +
Preference number: 3 (lower is better)
Translates to: INSCSAKDDYRSWPSLSIALSMP*SLWRCF
Trigger: GAAGCACCGCCATAAACTCAACGGCATAGAAAGGGC...GATAGAAAGACTGGGCCAGGATCTGTAATCATCCTTCGCAGAACATGAGTTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414527.6
3UTR-3UTR CAA 90 bp GAACACCAGACGTACAGCCAGACAGAGAGCGTAAGAGAAGAGCAGATGCTATTTTGCTCAGGCTCGCCATaGAAAACCATCTCAAATTCT +
Preference number: 3 (lower is better)
Translates to: EHQTYSQTESVREEQMLFCSGSP*KTISNS
Trigger: AGAATTTGAGATGGTTTTCAATGGCGAGCCTGAGCA...AAATAGCATCTGCTCTTCTCTTACGCTCTCTGTCTGGCTGTACGTCTGGTGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000493875.5
ENST00000625689.2
3UTR-3UTR CAA 90 bp AGAACACCAGACGTACAGCCAGACAGAGAGCGTAAGAGAAGAGCAGATGCTATTCTAGGACATGGCGTTTaGAAAAACAGTTTTCCTGGA +
Preference number: 3 (lower is better)
Translates to: RTPDVQPDRERKRRADAILGHGV*KNSFPG
Trigger: TCCAGGAAAACTGTTTTTCAAAACGCCATGTCCTAG...AATAGCATCTGCTCTTCTCTTACGCTCTCTGTCTGGCTGTACGTCTGGTGTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
3UTR-3UTR CAA 90 bp ACAATCATTGAAATCATGACACATAGTCTCCCCCTCCCACCACCAAGGTCAGACCTAGGACATGGCGTTTaGAAAAACAGTTTTCCTGGA +
Preference number: 3 (lower is better)
Translates to: TIIEIMTHSLPLPPPRSDLGHGV*KNSFPG
Trigger: TCCAGGAAAACTGTTTTTCAAAACGCCATGTCCTAG...GTCTGACCTTGGTGGTGGGAGGGGGAGACTATGTGTCATGATTTCAATGATTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
3UTR-3UTR CAA 90 bp CTGAGGCTTTGTGGAATATACCAAAAACAGACGTTTGTGTGCTCAGGCTCGCCAAGTTCCAGGCATTTGTaGATCTGGTTTTCAAATCCC +
Preference number: 3 (lower is better)
Translates to: LRLCGIYQKQTFVCSGSPSSRHL*IWFSNP
Trigger: GGGATTTGAAAACCAGATCAACAAATGCCTGGAACT...TGGCGAGCCTGAGCACACAAACGTCTGTTTTTGGTATATTCCACAAAGCCTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
3UTR-3UTR CAA 90 bp ATAAACTCATGTTCTGCGAAGGATGATTACAGATCCTGGCCCAGTCTTTCTATCATTTTTGGAGCCACCTaGTGTAGCTTTTCCCGTCGT +
Preference number: 3 (lower is better)
Translates to: INSCSAKDDYRSWPSLSIIFGAT*CSFSRR
Trigger: ACGACGGGAAAAGCTACACAAGGTGGCTCCAAAAAT...GATAGAAAGACTGGGCCAGGATCTGTAATCATCCTTCGCAGAACATGAGTTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
3UTR TCA 72 bp GATCTAGTTATTATCCAACAGTTGCTAGAAAAGCATTaGGAACACCAGACGTACAGCCAGACAGAGAGCGTA +
Preference number: 3 (lower is better)
Translates to: DLVIIQQLLEKH*EHQTYSQTESV
Trigger: TACGCTCTCTGTCTGGCTGTACGTCTGGTGTTCTCAATGCTTTTCTAGCAACTGTTGGATAATAACTAGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
3UTR TCA 72 bp CAAAAGCTCCATAAACAGTCGTGCCAGCAGTTGCATTaGCATAAAAGGGAACATATCCCTTCTGTTTGGCTT +
Preference number: 3 (lower is better)
Translates to: QKLHKQSCQQLH*HKREHIPSVWL
Trigger: AAGCCAAACAGAAGGGATATGTTCCCTTTTATGTCAATGCAACTGCTGGCACGACTGTTTATGGAGCTTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414527.6
3UTR GCA 72 bp CTTTATCTGAGATCTTCAGAAGGTCTTCGGAAATGTTaGCTTAGGTTTCAGCTAAGCGAGTCACAGAGATTG +
Preference number: 3 (lower is better)
Translates to: LYLRSSEGLRKC*LRFQLSESQRL
Trigger: CAATCTCTGTGACTCGCTTAGCTGAAACCTAAGGCAACATTTCCGAAGACCTTCTGAAGATCTCAGATAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
3UTR CCA 72 bp ATAAACTCATGTTCTGCGAAGGATGATTACAGATCCTaGCCCAGTCTTTCTATCTCCTCAATGAGGAAGTCA +
Preference number: 3 (lower is better)
Translates to: INSCSAKDDYRS*PSLSISSMRKS
Trigger: TGACTTCCTCATTGAGGAGATAGAAAGACTGGGCCAGGATCTGTAATCATCCTTCGCAGAACATGAGTTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
3UTR-3UTR CAA 90 bp CTTAGGTTTCAGCTAAGCGAGTCACAGAGATTGGTCATCAACTACTACAAAATTTGGGGAGGGTGTGACTaGTCATTTGGTGGTGTTTTT +
Preference number: 3 (lower is better)
Translates to: LRFQLSESQRLVINYYKIWGGCD*SFGGVF
Trigger: AAAAACACCACCAAATGACAAGTCACACCCTCCCCA...AATTTTGTAGTAGTTGATGACCAATCTCTGTGACTCGCTTAGCTGAAACCTAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
3UTR-3UTR CAA 90 bp CTTAGGTTTCAGCTAAGCGAGTCACAGAGATTGGTCATCAACTACTACAAAATTGAGACATCATACTGCTaGTCTGGCTGGAAGAGGTAT +
Preference number: 3 (lower is better)
Translates to: LRFQLSESQRLVINYYKIETSYC*SGWKRY
Trigger: ATACCTCTTCCAGCCAGACAAGCAGTATGATGTCTC...AATTTTGTAGTAGTTGATGACCAATCTCTGTGACTCGCTTAGCTGAAACCTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493875.5
ENST00000625689.2
3UTR GCA 72 bp CTTTATCAAAATCACATTGTCAGTTCCAAAGCCAAGTaGAGCCCCAGCTTTCTTTATGGAATAGTGACTCTG +
Preference number: 3 (lower is better)
Translates to: LYQNHIVSSKAK*SPSFLYGIVTL
Trigger: CAGAGTCACTATTCCATAAAGAAAGCTGGGGCTGCACTTGGCTTTGGAACTGACAATGTGATTTTGATAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414527.6
3UTR-3UTR CAA 90 bp CTTAGGTTTCAGCTAAGCGAGTCACAGAGATTGGTCATCAACTACTACAAAATTAGTTCCAGGCATTTGTaGATCTGGTTTTCAAATCCC +
Preference number: 3 (lower is better)
Translates to: LRFQLSESQRLVINYYKISSRHL*IWFSNP
Trigger: GGGATTTGAAAACCAGATCAACAAATGCCTGGAACT...AATTTTGTAGTAGTTGATGACCAATCTCTGTGACTCGCTTAGCTGAAACCTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000493875.5
ENST00000625689.2
3UTR TCA 72 bp TTCTTCAAAAACAGTTGTGAGCCTGGTCACTTTATCTaGGATCTTCAGAAGGTCTTCGGAAATGTTGCCTTA +
Preference number: 3 (lower is better)
Translates to: FFKNSCEPGHFI*DLQKVFGNVAL
Trigger: TAAGGCAACATTTCCGAAGACCTTCTGAAGATCTCAGATAAAGTGACCAGGCTCACAACTGTTTTTGAAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp TGGCCTTGTCCCCTTGGGGCTGGTAGCCAACCATGGTCGTACCTGACTCCATCAGGTGCTTCCTGGACATaGGCAGCCCACCTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: WPCPLGAGSQPWSYLTPSGASWT*AAHLPR
Trigger: CCTGGGGAGGTGGGCTGCTCATGTCCAGGAAGCACC...TGATGGAGTCAGGTACGACCATGGTTGGCTACCAGCCCCAAGGGGACAAGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp TTGGAGCCACCTTGTGTAGCTTTTCCCGTCGTTGAGGGCTGTCTGGCACACCCCCAGGGGAGCGCTCAGTaGGCGATTTTCCAGCCGAGC +
Preference number: 4 (lower is better)
Translates to: LEPPCVAFPVVEGCLAHPQGSAQ*AIFQPS
Trigger: GCTCGGCTGGAAAATCGCTCACTGAGCGCTCCCCTG...GGGGTGTGCCAGACAGCCCTCAACGACGGGAAAAGCTACACAAGGTGGCTCCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000493875.5
CDS-3UTR TCA 90 bp TTGGAGCCACCTTGTGTAGCTTTTCCCGTCGTTGAGGGCTGTCTGGCACACCCCAGCTTTTCCCGTCGTTaGGGGCTGTCTGGCACACCC +
Preference number: 4 (lower is better)
Translates to: LEPPCVAFPVVEGCLAHPSFSRR*GLSGTP
Trigger: GGGTGTGCCAGACAGCCCTCAACGACGGGAAAAGCT...GGGGTGTGCCAGACAGCCCTCAACGACGGGAAAAGCTACACAAGGTGGCTCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp CCCCTGAGGCTTTGTGGAATATACCAAAAACAGACGTTTGTGTGCTCAGGCTCGCGGCGCGACCTGGAGTaGAGCGCCGAGACGAGGCGG +
Preference number: 4 (lower is better)
Translates to: PLRLCGIYQKQTFVCSGSRRDLE*SAETRR
Trigger: CCGCCTCGTCTCGGCGCTTCACTCCAGGTCGCGCCG...CGAGCCTGAGCACACAAACGTCTGTTTTTGGTATATTCCACAAAGCCTCAGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493875.5
CDS-3UTR GCA 90 bp CCTTGTCCCCTTGGGGCTGGTAGCCAACCATGGTCGTACCTGACTCCATCATCAGCCCCAGTTTTCTGGTaGATCCATGGGCCACGCCGC +
Preference number: 4 (lower is better)
Translates to: PCPLGAGSQPWSYLTPSSAPVFW*IHGPRR
Trigger: GCGGCGTGGCCCATGGATGCACCAGAAAACTGGGGC...TGATGATGGAGTCAGGTACGACCATGGTTGGCTACCAGCCCCAAGGGGACAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR GCA 90 bp TGGCCTTGTCCCCTTGGGGCTGGTAGCCAACCATGGTCGTACCTGACTCCATCACAGTCAACCAGGATCTaGTCCAGGGACTCGGGGTGG +
Preference number: 4 (lower is better)
Translates to: WPCPLGAGSQPWSYLTPSQSTRI*SRDSGW
Trigger: CCACCCCGAGTCCCTGGAGCAGATCCTGGTTGACTG...TGATGGAGTCAGGTACGACCATGGTTGGCTACCAGCCCCAAGGGGACAAGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR GCA 90 bp CACGTGGCGGCCACACTGAATTGCCTTGTCCCCGGTGTCGTAGGAGACATCATACGCGTTCGAGGAGGTTaGGGACGAAGATGGGGTCGA +
Preference number: 4 (lower is better)
Translates to: HVAATLNCLVPGVVGDIIRVRGG*GRRWGR
Trigger: TCGACCCCATCTTCGTCCGCAACCTCCTCGAACGCG...TATGATGTCTCCTACGACACCGGGGACAAGGCAATTCAGTGTGGCCGCCACGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR GCA 90 bp CACGTGGCGGCCACACTGAATTGCCTTGTCCCCGGTGTCGTAGGAGACATCATACAGTCAACCAGGATCTaGTCCAGGGACTCGGGGTGG +
Preference number: 4 (lower is better)
Translates to: HVAATLNCLVPGVVGDIIQSTRI*SRDSGW
Trigger: CCACCCCGAGTCCCTGGAGCAGATCCTGGTTGACTG...TATGATGTCTCCTACGACACCGGGGACAAGGCAATTCAGTGTGGCCGCCACGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR GCA 90 bp TCATACTGCTTGTCTGGCTGGAAGAGGTATCCTGCACACATCTGGTTGCATCCTGCGGCGGGGCTCCTCTaGAGGTGCCTGACCGCCTCT +
Preference number: 4 (lower is better)
Translates to: SYCLSGWKRYPAHIWLHPAAGLL*RCLTAS
Trigger: AGAGGCGGTCAGGCACCTGCAGAGGAGCCCCGCCGC...AGGATGCAACCAGATGTGTGCAGGATACCTCTTCCAGCCAGACAAGCAGTATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000625689.2
CDS-3UTR CCA 90 bp TTGGAGCCACCTTGTGTAGCTTTTCCCGTCGTTGAGGGCTGTCTGGCACACCCCTCCAGGGACTCGGGGTaGTCAGAGAGCTCCAAGTTG +
Preference number: 4 (lower is better)
Translates to: LEPPCVAFPVVEGCLAHPSRDSG*SESSKL
Trigger: CAACTTGGAGCTCTCTGACCACCCCGAGTCCCTGGA...GGGGTGTGCCAGACAGCCCTCAACGACGGGAAAAGCTACACAAGGTGGCTCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CCA 90 bp TTGGAGCCACCTTGTGTAGCTTTTCCCGTCGTTGAGGGCTGTCTGGCACACCCCAGACTGGGTAGCGGCTaGGTTGGAGATGACCATCCG +
Preference number: 4 (lower is better)
Translates to: LEPPCVAFPVVEGCLAHPRLGSG*VGDDHP
Trigger: CGGATGGTCATCTCCAACCCAGCCGCTACCCAGTCT...GGGGTGTGCCAGACAGCCCTCAACGACGGGAAAAGCTACACAAGGTGGCTCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CCA 90 bp GACTGCCTTCATCCAGTTTCCAAAATGATGGAGACCTGGCCAGCAGGGAGGGAGATCTACTGGCTAGCATaGGGCGGGAGTGGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: DCLHPVSKMMETWPAGREIYWLA*GGSGAG
Trigger: CCCTGCCCCACTCCCGCCCCATGCTAGCCAGTAGAT...CTCCCTCCCTGCTGGCCAGGTCTCCATCATTTTGGAAACTGGATGAAGGCAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486850.1
CDS-3UTR CCA 90 bp CCCCTGAGGCTTTGTGGAATATACCAAAAACAGACGTTTGTGTGCTCAGGCTCGGGCCGCTCTCGAGTCTaGCGGTGCATCGGCGCGACC +
Preference number: 4 (lower is better)
Translates to: PLRLCGIYQKQTFVCSGSGRSRV*RCIGAT
Trigger: GGTCGCGCCGATGCACCGCCAGACTCGAGAGCGGCC...CGAGCCTGAGCACACAAACGTCTGTTTTTGGTATATTCCACAAAGCCTCAGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493875.5
CDS-3UTR TCA 90 bp TGGCCTTGTCCCCTTGGGGCTGGTAGCCAACCATGGTCGTACCTGACTCCATCACAGAGAGCTCCAAGTTaGAGCCCTCCATGCCTTCCA +
Preference number: 4 (lower is better)
Translates to: WPCPLGAGSQPWSYLTPSQRAPS*SPPCLP
Trigger: TGGAAGGCATGGAGGGCTTCAACTTGGAGCTCTCTG...TGATGGAGTCAGGTACGACCATGGTTGGCTACCAGCCCCAAGGGGACAAGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR GCA 90 bp GGTCGATTCTCACCAACAGCATTTCCCTCGGCCCCTAGGACATGGCGTTTTGAAGCCCCAGTTTTCTGGTaGATCCATGGGCCACGCCGC +
Preference number: 4 (lower is better)
Translates to: GRFSPTAFPSAPRTWRFEAPVFW*IHGPRR
Trigger: GCGGCGTGGCCCATGGATGCACCAGAAAACTGGGGC...TTCAAAACGCCATGTCCTAGGGGCCGAGGGAAATGCTGTTGGTGAGAATCGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CCA 90 bp CCTTGTCCCCTTGGGGCTGGTAGCCAACCATGGTCGTACCTGACTCCATCATCATTTCTGGTGCATCCATaGGCCACGCCGCACCAGGTA +
Preference number: 4 (lower is better)
Translates to: PCPLGAGSQPWSYLTPSSFLVHP*ATPHQV
Trigger: TACCTGGTGCGGCGTGGCCCATGGATGCACCAGAAA...TGATGATGGAGTCAGGTACGACCATGGTTGGCTACCAGCCCCAAGGGGACAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CCA 90 bp CACGTGGCGGCCACACTGAATTGCCTTGTCCCCGGTGTCGTAGGAGACATCATATCGTTGAGGGCTGTCTaGCACACCCCTGAGGCTTTG +
Preference number: 4 (lower is better)
Translates to: HVAATLNCLVPGVVGDIISLRAV*HTPEAL
Trigger: CAAAGCCTCAGGGGTGTGCCAGACAGCCCTCAACGA...TATGATGTCTCCTACGACACCGGGGACAAGGCAATTCAGTGTGGCCGCCACGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CCA 90 bp CACGTGGCGGCCACACTGAATTGCCTTGTCCCCGGTGTCGTAGGAGACATCATACCATCCGGAAGAAGTTaGCCTTGTCCCCTTGGGGCT +
Preference number: 4 (lower is better)
Translates to: HVAATLNCLVPGVVGDIIPSGRS*PCPLGA
Trigger: AGCCCCAAGGGGACAAGGCCAACTTCTTCCGGATGG...TATGATGTCTCCTACGACACCGGGGACAAGGCAATTCAGTGTGGCCGCCACGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR GCA 90 bp CCATGTGTGCAGTTACCATCACCTCTGGAGGTCACAATCATGCTTTGGTTCTGCCTCCCGCCTTTCCTCTaGACAGCGCCCAGCGATCCG +
Preference number: 4 (lower is better)
Translates to: PCVQLPSPLEVTIMLWFCLPPFL*TAPSDP
Trigger: CGGATCGCTGGGCGCTGTGCAGAGGAAAGGCGGGAG...GCAGAACCAAAGCATGATTGTGACCTCCAGAGGTGATGGTAACTGCACACATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344257.9
ENST00000375272.5
CDS-3UTR GCA 90 bp TTTTCCTTGGGAGGCCCCTGGAAATTTAGGAGGAAGACCCTTGGAAACCATGTGCTCCCGCCTTTCCTCTaGACAGCGCCCAGCGATCCG +
Preference number: 4 (lower is better)
Translates to: FSLGGPWKFRRKTLGNHVLPPFL*TAPSDP
Trigger: CGGATCGCTGGGCGCTGTGCAGAGGAAAGGCGGGAG...CACATGGTTTCCAAGGGTCTTCCTCCTAAATTTCCAGGGGCCTCCCAAGGAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344257.9
ENST00000375272.5
CDS-3UTR GCA 90 bp GTCCATTTTCCTTGGGAGGCCCCTGGAAATTTAGGAGGAAGACCCTTGGAAACCGCCCCAGTTTTCTGGTaGATCCATGGGCCACGCCGC +
Preference number: 4 (lower is better)
Translates to: VHFPWEAPGNLGGRPLETAPVFW*IHGPRR
Trigger: GCGGCGTGGCCCATGGATGCACCAGAAAACTGGGGC...GGTTTCCAAGGGTCTTCCTCCTAAATTTCCAGGGGCCTCCCAAGGAAAATGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000344257.9
ENST00000375272.5
CDS-3UTR GCA 90 bp AACCATGTGTGCAGTTACCATCACCTCTGGAGGTCACAATCATGCTTTGGTTCTGCGGCGGGGCTCCTCTaGAGGTGCCTGACCGCCTCT +
Preference number: 4 (lower is better)
Translates to: NHVCSYHHLWRSQSCFGSAAGLL*RCLTAS
Trigger: AGAGGCGGTCAGGCACCTGCAGAGGAGCCCCGCCGC...AGAACCAAAGCATGATTGTGACCTCCAGAGGTGATGGTAACTGCACACATGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375272.5
CDS-3UTR GCA 90 bp GGTCGATTCTCACCAACAGCATTTCCCTCGGCCCCTAGGACATGGCGTTTTGAAAAATCACGAGGCCGTTaGTCGCGGGGGCAGCTAGTC +
Preference number: 4 (lower is better)
Translates to: GRFSPTAFPSAPRTWRFEKSRGR*SRGQLV
Trigger: GACTAGCTGCCCCCGCGAGCAACGGCCTCGTGATTT...TTCAAAACGCCATGTCCTAGGGGCCGAGGGAAATGCTGTTGGTGAGAATCGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000625689.2
CDS-3UTR CCA 90 bp TGGCCTTGTCCCCTTGGGGCTGGTAGCCAACCATGGTCGTACCTGACTCCATCATCTCTTCCAGGCTGTTaGTCCTTTGCAAGAAGCCGC +
Preference number: 4 (lower is better)
Translates to: WPCPLGAGSQPWSYLTPSSLPGC*SFARSR
Trigger: GCGGCTTCTTGCAAAGGACCAACAGCCTGGAAGAGA...TGATGGAGTCAGGTACGACCATGGTTGGCTACCAGCCCCAAGGGGACAAGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CCA 90 bp TTGGAGCCACCTTGTGTAGCTTTTCCCGTCGTTGAGGGCTGTCTGGCACACCCCGCTGGTAGCCAACCATaGTCGTACCTGACTCCATCA +
Preference number: 4 (lower is better)
Translates to: LEPPCVAFPVVEGCLAHPAGSQP*SYLTPS
Trigger: TGATGGAGTCAGGTACGACCATGGTTGGCTACCAGC...GGGGTGTGCCAGACAGCCCTCAACGACGGGAAAAGCTACACAAGGTGGCTCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CCA 90 bp GGAGACATCATACTGCTTGTCTGGCTGGAAGAGGTATCCTGCACACATCTGGTTCGGGGCGGGCATGTCTaGTTCGGTGTCTGGTTCCCG +
Preference number: 4 (lower is better)
Translates to: GDIILLVWLEEVSCTHLVRGGHV*FGVWFP
Trigger: CGGGAACCAGACACCGAACCAGACATGCCCGCCCCG...AACCAGATGTGTGCAGGATACCTCTTCCAGCCAGACAAGCAGTATGATGTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493875.5
CDS-3UTR TCA 90 bp GGTCTTCGGAAATGTTGCCTTAGGTTTCAGCTAAGCGAGTCACAGAGATTGGTCGGTGCTTCCTGGACATaGGCAGCCCACCTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: GLRKCCLRFQLSESQRLVGASWT*AAHLPR
Trigger: CCTGGGGAGGTGGGCTGCTCATGTCCAGGAAGCACC...GACCAATCTCTGTGACTCGCTTAGCTGAAACCTAAGGCAACATTTCCGAAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp AAAGCATTGAGAACACCAGACGTACAGCCAGACAGAGAGCGTAAGAGAAGAGCAGGTGCTTCCTGGACATaGGCAGCCCACCTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: KALRTPDVQPDRERKRRAGASWT*AAHLPR
Trigger: CCTGGGGAGGTGGGCTGCTCATGTCCAGGAAGCACC...TGCTCTTCTCTTACGCTCTCTGTCTGGCTGTACGTCTGGTGTTCTCAATGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp TCATACTGCTTGTCTGGCTGGAAGAGGTATCCTGCACACATCTGGTTGCATCCTACGTGGCGGCCACACTaGATTGCCTTGTCCCCGGTG +
Preference number: 4 (lower is better)
Translates to: SYCLSGWKRYPAHIWLHPTWRPH*IALSPV
Trigger: CACCGGGGACAAGGCAATTCAGTGTGGCCGCCACGT...AGGATGCAACCAGATGTGTGCAGGATACCTCTTCCAGCCAGACAAGCAGTATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp CATACTGCTTGTCTGGCTGGAAGAGGTATCCTGCACACATCTGGTTGCATCCTTACGTGGCGGCCACACTaGATTGCCTTGTCCCCGGTG +
Preference number: 4 (lower is better)
Translates to: HTACLAGRGILHTSGCILTWRPH*IALSPV
Trigger: CACCGGGGACAAGGCAATTCAGTGTGGCCGCCACGT...AAGGATGCAACCAGATGTGTGCAGGATACCTCTTCCAGCCAGACAAGCAGTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp CCTTGTCCCCTTGGGGCTGGTAGCCAACCATGGTCGTACCTGACTCCATCATCAACATCAGCCAGAACTTaGAGATATCCACGTGGCGGC +
Preference number: 4 (lower is better)
Translates to: PCPLGAGSQPWSYLTPSSTSART*RYPRGG
Trigger: GCCGCCACGTGGATATCTTCAAGTTCTGGCTGATGT...TGATGATGGAGTCAGGTACGACCATGGTTGGCTACCAGCCCCAAGGGGACAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp GGTCGATTCTCACCAACAGCATTTCCCTCGGCCCCTAGGACATGGCGTTTTGAACGGCTGGGTTGGAGATaGCCATCCGGAAGAAGTTGG +
Preference number: 4 (lower is better)
Translates to: GRFSPTAFPSAPRTWRFERLGWR*PSGRSW
Trigger: CCAACTTCTTCCGGATGGTCATCTCCAACCCAGCCG...TTCAAAACGCCATGTCCTAGGGGCCGAGGGAAATGCTGTTGGTGAGAATCGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp TGGCCTTGTCCCCTTGGGGCTGGTAGCCAACCATGGTCGTACCTGACTCCATCAGCGGGAAACATGCCGTaGTCTATTACTAAGCCACAC +
Preference number: 4 (lower is better)
Translates to: WPCPLGAGSQPWSYLTPSAGNMP*SITKPH
Trigger: GTGTGGCTTAGTAATAGATCACGGCATGTTTCCCGC...TGATGGAGTCAGGTACGACCATGGTTGGCTACCAGCCCCAAGGGGACAAGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp TCATACTGCTTGTCTGGCTGGAAGAGGTATCCTGCACACATCTGGTTGCATCCTCACGGAGGCTCCCCTTaGAGATCCGGCTCTGGAGAG +
Preference number: 4 (lower is better)
Translates to: SYCLSGWKRYPAHIWLHPHGGSP*RSGSGE
Trigger: CTCTCCAGAGCCGGATCTTCAAGGGGAGCCTCCGTG...AGGATGCAACCAGATGTGTGCAGGATACCTCTTCCAGCCAGACAAGCAGTATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493875.5
CDS-3UTR GCA 90 bp GGTCGATTCTCACCAACAGCATTTCCCTCGGCCCCTAGGACATGGCGTTTTGAAGGCGTCACCTCCAGCTaGTTCCTCGTTCTCGCTAGT +
Preference number: 4 (lower is better)
Translates to: GRFSPTAFPSAPRTWRFEGVTSS*FLVLAS
Trigger: ACTAGCGAGAACGAGGAAGCAGCTGGAGGTGACGCC...TTCAAAACGCCATGTCCTAGGGGCCGAGGGAAATGCTGTTGGTGAGAATCGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358196.8
ENST00000625689.2
CDS-3UTR GCA 90 bp ACAATCATTGAAATCATGACACATAGTCTCCCCCTCCCACCACCAAGGTCAGACCTCCCGCCTTTCCTCTaGACAGCGCCCAGCGATCCG +
Preference number: 4 (lower is better)
Translates to: TIIEIMTHSLPLPPPRSDLPPFL*TAPSDP
Trigger: CGGATCGCTGGGCGCTGTGCAGAGGAAAGGCGGGAG...GTCTGACCTTGGTGGTGGGAGGGGGAGACTATGTGTCATGATTTCAATGATTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358196.8
ENST00000625689.2
CDS-3UTR GCA 90 bp CTGAGGCTTTGTGGAATATACCAAAAACAGACGTTTGTGTGCTCAGGCTCGCCACTCCCGCCTTTCCTCTaGACAGCGCCCAGCGATCCG +
Preference number: 4 (lower is better)
Translates to: LRLCGIYQKQTFVCSGSPLPPFL*TAPSDP
Trigger: CGGATCGCTGGGCGCTGTGCAGAGGAAAGGCGGGAG...TGGCGAGCCTGAGCACACAAACGTCTGTTTTTGGTATATTCCACAAAGCCTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000625689.2
CDS-3UTR GCA 90 bp TGGCCTTGTCCCCTTGGGGCTGGTAGCCAACCATGGTCGTACCTGACTCCATCAAGGCTGTTGGTCCTTTaGAAGAAGCCGCAGATCTTG +
Preference number: 4 (lower is better)
Translates to: WPCPLGAGSQPWSYLTPSRLLVL*KKPQIL
Trigger: CAAGATCTGCGGCTTCTTGCAAAGGACCAACAGCCT...TGATGGAGTCAGGTACGACCATGGTTGGCTACCAGCCCCAAGGGGACAAGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR GCA 90 bp TTGGAGCCACCTTGTGTAGCTTTTCCCGTCGTTGAGGGCTGTCTGGCACACCCCAGGCTGTTGGTCCTTTaGAAGAAGCCGCAGATCTTG +
Preference number: 4 (lower is better)
Translates to: LEPPCVAFPVVEGCLAHPRLLVL*KKPQIL
Trigger: CAAGATCTGCGGCTTCTTGCAAAGGACCAACAGCCT...GGGGTGTGCCAGACAGCCCTCAACGACGGGAAAAGCTACACAAGGTGGCTCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR GCA 90 bp ATTGACTGCCTTCATCCAGTTTCCAAAATGATGGAGACCTGGCCAGCAGGGAGGAGAAGTCAGTCTCTGTaGGCCGGAAGCGGGCATCCC +
Preference number: 4 (lower is better)
Translates to: IDCLHPVSKMMETWPAGRRSQSL*AGSGHP
Trigger: GGGATGCCCGCTTCCGGCGCACAGAGACTGACTTCT...CCTCCCTGCTGGCCAGGTCTCCATCATTTTGGAAACTGGATGAAGGCAGTCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486850.1
CDS-3UTR GCA 90 bp TTGGAGCCACCTTGTGTAGCTTTTCCCGTCGTTGAGGGCTGTCTGGCACACCCCCTGGAAGAGGTATCCTaGACACATCTGGTTGCATCC +
Preference number: 4 (lower is better)
Translates to: LEPPCVAFPVVEGCLAHPLEEVS*THLVAS
Trigger: GGATGCAACCAGATGTGTGCAGGATACCTCTTCCAG...GGGGTGTGCCAGACAGCCCTCAACGACGGGAAAAGCTACACAAGGTGGCTCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR GCA 90 bp CTGCTTGTCTGGCTGGAAGAGGTATCCTGCACACATCTGGTTGCATCCTTGGAGGCGGCCACACTGAATTaGCTTGTCCCCGGTGTCGTA +
Preference number: 4 (lower is better)
Translates to: LLVWLEEVSCTHLVASLEAATLN*LVPGVV
Trigger: TACGACACCGGGGACAAGGCAATTCAGTGTGGCCGC...CTCCAAGGATGCAACCAGATGTGTGCAGGATACCTCTTCCAGCCAGACAAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR GCA 90 bp TTGGAGCCACCTTGTGTAGCTTTTCCCGTCGTTGAGGGCTGTCTGGCACACCCCTCCCACTGTGCCCTTTaGTTTCCACATCAGCCAGAA +
Preference number: 4 (lower is better)
Translates to: LEPPCVAFPVVEGCLAHPSHCAL*FPHQPE
Trigger: TTCTGGCTGATGTGGAAAGCAAAGGGCACAGTGGGA...GGGGTGTGCCAGACAGCCCTCAACGACGGGAAAAGCTACACAAGGTGGCTCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR GCA 90 bp TGTGTGCAGTTACCATCACCTCTGGAGGTCACAATCATGCTTTGGTTCTGCTCTGGGCTCCTCTGCAGGTaGCTGACCGCCTCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: CVQLPSPLEVTIMLWFCSGLLCR*LTASGA
Trigger: AGCTCCAGAGGCGGTCAGGCACCTGCAGAGGAGCCC...AGAGCAGAACCAAAGCATGATTGTGACCTCCAGAGGTGATGGTAACTGCACACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375272.5
CDS-3UTR GCA 90 bp GGCATTCCCATAAACTCATGTTCTGCGAAGGATGATTACAGATCCTGGCCCAGTGCAGCGGAGGAGACGTaGGCGCTAGCTCCGGTACTG +
Preference number: 4 (lower is better)
Translates to: GIPINSCSAKDDYRSWPSAAEET*ALAPVL
Trigger: CAGTACCGGAGCTAGCGCGCACGTCTCCTCCGCTGC...ACTGGGCCAGGATCTGTAATCATCCTTCGCAGAACATGAGTTTATGGGAATGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493875.5
CDS-3UTR GCA 90 bp ACAATCATTGAAATCATGACACATAGTCTCCCCCTCCCACCACCAAGGTCAGACGGACTTCCGGGGTCCTaGACACCGGAGGGACTGAGC +
Preference number: 4 (lower is better)
Translates to: TIIEIMTHSLPLPPPRSDGLPGS*TPEGLS
Trigger: GCTCAGTCCCTCCGGTGTGCAGGACCCCGGAAGTCC...GTCTGACCTTGGTGGTGGGAGGGGGAGACTATGTGTCATGATTTCAATGATTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493875.5
CDS-3UTR GCA 90 bp TCATACTGCTTGTCTGGCTGGAAGAGGTATCCTGCACACATCTGGTTGCATCCTGAGAAGCGAGAGCTGTaGGGGGAGGACTTCCGGGGT +
Preference number: 4 (lower is better)
Translates to: SYCLSGWKRYPAHIWLHPEKREL*GEDFRG
Trigger: ACCCCGGAAGTCCTCCCCGCACAGCTCTCGCTTCTC...AGGATGCAACCAGATGTGTGCAGGATACCTCTTCCAGCCAGACAAGCAGTATGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493875.5
CDS-3UTR CCA 90 bp GGTCGATTCTCACCAACAGCATTTCCCTCGGCCCCTAGGACATGGCGTTTTGAAGGTTGCGGACGAAGATaGGGTCGAAGACGCCATCAG +
Preference number: 4 (lower is better)
Translates to: GRFSPTAFPSAPRTWRFEGCGRR*GRRRHQ
Trigger: CTGATGGCGTCTTCGACCCCATCTTCGTCCGCAACC...TTCAAAACGCCATGTCCTAGGGGCCGAGGGAAATGCTGTTGGTGAGAATCGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CCA 90 bp TGGCCTTGTCCCCTTGGGGCTGGTAGCCAACCATGGTCGTACCTGACTCCATCATACTGCTTGTCTGGCTaGAAGAGGTATCCTGCACAC +
Preference number: 4 (lower is better)
Translates to: WPCPLGAGSQPWSYLTPSYCLSG*KRYPAH
Trigger: GTGTGCAGGATACCTCTTCCAGCCAGACAAGCAGTA...TGATGGAGTCAGGTACGACCATGGTTGGCTACCAGCCCCAAGGGGACAAGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CCA 90 bp GGTCGATTCTCACCAACAGCATTTCCCTCGGCCCCTAGGACATGGCGTTTTGAATCGTTGAGGGCTGTCTaGCACACCCCTGAGGCTTTG +
Preference number: 4 (lower is better)
Translates to: GRFSPTAFPSAPRTWRFESLRAV*HTPEAL
Trigger: CAAAGCCTCAGGGGTGTGCCAGACAGCCCTCAACGA...TTCAAAACGCCATGTCCTAGGGGCCGAGGGAAATGCTGTTGGTGAGAATCGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CCA 90 bp CCTTGTCCCCTTGGGGCTGGTAGCCAACCATGGTCGTACCTGACTCCATCATCAAAGTCAATGTCAGACTaGGTAGCGGCTGGGTTGGAG +
Preference number: 4 (lower is better)
Translates to: PCPLGAGSQPWSYLTPSSKSMSD*VAAGLE
Trigger: CTCCAACCCAGCCGCTACCCAGTCTGACATTGACTT...TGATGATGGAGTCAGGTACGACCATGGTTGGCTACCAGCCCCAAGGGGACAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CCA 90 bp CCTTGTCCCCTTGGGGCTGGTAGCCAACCATGGTCGTACCTGACTCCATCATCAGTTCTCCCTCGGACTTaGCCAGAGAAGAACCACAGT +
Preference number: 4 (lower is better)
Translates to: PCPLGAGSQPWSYLTPSSVLPRT*PEKNHS
Trigger: ACTGTGGTTCTTCTCTGGCCAAGTCCGAGGGAGAAC...TGATGATGGAGTCAGGTACGACCATGGTTGGCTACCAGCCCCAAGGGGACAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493875.5
CDS-3UTR CCA 90 bp CATACTGCTTGTCTGGCTGGAAGAGGTATCCTGCACACATCTGGTTGCATCCTTCGCTACAAGCCCCATTaGGCACTCAGCAGCCGGCGT +
Preference number: 4 (lower is better)
Translates to: HTACLAGRGILHTSGCILRYKPH*ALSSRR
Trigger: ACGCCGGCTGCTGAGTGCCCAATGGGGCTTGTAGCG...AAGGATGCAACCAGATGTGTGCAGGATACCTCTTCCAGCCAGACAAGCAGTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493875.5
CDS-3UTR TCA 90 bp CTGCTTGTCTGGCTGGAAGAGGTATCCTGCACACATCTGGTTGCATCCTTGGAGAGGATTGCCTCTCCTTaGAGGCACTCACAAGGCGAC +
Preference number: 4 (lower is better)
Translates to: LLVWLEEVSCTHLVASLERIASP*RHSQGD
Trigger: GTCGCCTTGTGAGTGCCTTCAAGGAGAGGCAATCCT...CTCCAAGGATGCAACCAGATGTGTGCAGGATACCTCTTCCAGCCAGACAAGCAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp TTCTATGCCGTTGAGTTTATGGCGGTGCTTCCTGGACATGAGCAGCCCACCTCCGTTGGTATTGGCCGTTaGTGTCAGCCATTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: FYAVEFMAVLPGHEQPTSVGIGR*CQPFSS
Trigger: GCTGGAGAATGGCTGACATCAACGGCCAATACCAAC...GGAGGTGGGCTGCTCATGTCCAGGAAGCACCGCCATAAACTCAACGGCATAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414527.6
CDS-3UTR TCA 90 bp AAAGCATTGAGAACACCAGACGTACAGCCAGACAGAGAGCGTAAGAGAAGAGCAACGTGGCGGCCACACTaGATTGCCTTGTCCCCGGTG +
Preference number: 4 (lower is better)
Translates to: KALRTPDVQPDRERKRRATWRPH*IALSPV
Trigger: CACCGGGGACAAGGCAATTCAGTGTGGCCGCCACGT...TGCTCTTCTCTTACGCTCTCTGTCTGGCTGTACGTCTGGTGTTCTCAATGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp TGGCCTTGTCCCCTTGGGGCTGGTAGCCAACCATGGTCGTACCTGACTCCATCACCATCATCAGGGCTTTaGTTTTTGGAGCCACCTTGT +
Preference number: 4 (lower is better)
Translates to: WPCPLGAGSQPWSYLTPSPSSGL*FLEPPC
Trigger: ACAAGGTGGCTCCAAAAATCAAAGCCCTGATGATGG...TGATGGAGTCAGGTACGACCATGGTTGGCTACCAGCCCCAAGGGGACAAGGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR GCA 90 bp TGTGTGCAGTTACCATCACCTCTGGAGGTCACAATCATGCTTTGGTTCTGCTCTAAACAGGCTCGGCTCTaGGACAGCGAGCCGGGCACT +
Preference number: 4 (lower is better)
Translates to: CVQLPSPLEVTIMLWFCSKQARL*DSEPGT
Trigger: AGTGCCCGGCTCGCTGTCGCAGAGCCGAGCCTGTTT...AGAGCAGAACCAAAGCATGATTGTGACCTCCAGAGGTGATGGTAACTGCACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344257.9
CDS-3UTR GCA 90 bp ACAATCATTGAAATCATGACACATAGTCTCCCCCTCCCACCACCAAGGTCAGACAAACAGGCTCGGCTCTaGGACAGCGAGCCGGGCACT +
Preference number: 4 (lower is better)
Translates to: TIIEIMTHSLPLPPPRSDKQARL*DSEPGT
Trigger: AGTGCCCGGCTCGCTGTCGCAGAGCCGAGCCTGTTT...GTCTGACCTTGGTGGTGGGAGGGGGAGACTATGTGTCATGATTTCAATGATTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358196.8
ENST00000625689.2
CDS-3UTR GCA 90 bp AAAGCATTGAGAACACCAGACGTACAGCCAGACAGAGAGCGTAAGAGAAGAGCAAAACAGGCTCGGCTCTaGGACAGCGAGCCGGGCACT +
Preference number: 4 (lower is better)
Translates to: KALRTPDVQPDRERKRRAKQARL*DSEPGT
Trigger: AGTGCCCGGCTCGCTGTCGCAGAGCCGAGCCTGTTT...TGCTCTTCTCTTACGCTCTCTGTCTGGCTGTACGTCTGGTGTTCTCAATGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358196.8
ENST00000625689.2
CDS-3UTR GCA 90 bp CCATTTTCCTTGGGAGGCCCCTGGAAATTTAGGAGGAAGACCCTTGGAAACCATCGCGTTCGAGGAGGTTaGGGACGAAGATGGGGTCGA +
Preference number: 4 (lower is better)
Translates to: PFSLGGPWKFRRKTLGNHRVRGG*GRRWGR
Trigger: TCGACCCCATCTTCGTCCGCAACCTCCTCGAACGCG...ATGGTTTCCAAGGGTCTTCCTCCTAAATTTCCAGGGGCCTCCCAAGGAAAATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344257.9
ENST00000375272.5
CDS-3UTR GCA 90 bp GAACACCAGACGTACAGCCAGACAGAGAGCGTAAGAGAAGAGCAGATGCTATTTGCCCCAGTTTTCTGGTaGATCCATGGGCCACGCCGC +
Preference number: 4 (lower is better)
Translates to: EHQTYSQTESVREEQMLFAPVFW*IHGPRR
Trigger: GCGGCGTGGCCCATGGATGCACCAGAAAACTGGGGC...AAATAGCATCTGCTCTTCTCTTACGCTCTCTGTCTGGCTGTACGTCTGGTGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR GCA 90 bp CACGTGGCGGCCACACTGAATTGCCTTGTCCCCGGTGTCGTAGGAGACATCATAAGGTTCTTGGAGGATTaGCTCTCCTTGAAGGCACTC +
Preference number: 4 (lower is better)
Translates to: HVAATLNCLVPGVVGDIIRFLED*LSLKAL
Trigger: GAGTGCCTTCAAGGAGAGGCAATCCTCCAAGAACCT...TATGATGTCTCCTACGACACCGGGGACAAGGCAATTCAGTGTGGCCGCCACGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR GCA 90 bp TGCAGTTACCATCACCTCTGGAGGTCACAATCATGCTTTGGTTCTGCTCTGAGCAGAAGTCAGTCTCTGTaGGCCGGAAGCGGGCATCCC +
Preference number: 4 (lower is better)
Translates to: CSYHHLWRSQSCFGSALSRSQSL*AGSGHP
Trigger: GGGATGCCCGCTTCCGGCGCACAGAGACTGACTTCT...GCTCAGAGCAGAACCAAAGCATGATTGTGACCTCCAGAGGTGATGGTAACTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344257.9
ENST00000375272.5
CDS-3UTR GCA 90 bp CCATTTTCCTTGGGAGGCCCCTGGAAATTTAGGAGGAAGACCCTTGGAAACCATCAGTCAACCAGGATCTaGTCCAGGGACTCGGGGTGG +
Preference number: 4 (lower is better)
Translates to: PFSLGGPWKFRRKTLGNHQSTRI*SRDSGW
Trigger: CCACCCCGAGTCCCTGGAGCAGATCCTGGTTGACTG...ATGGTTTCCAAGGGTCTTCCTCCTAAATTTCCAGGGGCCTCCCAAGGAAAATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344257.9
ENST00000375272.5
CDS-3UTR GCA 90 bp TGCAGTTACCATCACCTCTGGAGGTCACAATCATGCTTTGGTTCTGCTCTGAGCCAGTCAACCAGGATCTaGTCCAGGGACTCGGGGTGG +
Preference number: 4 (lower is better)
Translates to: CSYHHLWRSQSCFGSALSQSTRI*SRDSGW
Trigger: CCACCCCGAGTCCCTGGAGCAGATCCTGGTTGACTG...GCTCAGAGCAGAACCAAAGCATGATTGTGACCTCCAGAGGTGATGGTAACTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344257.9
ENST00000375272.5
CDS-3UTR GCA 90 bp CCCCTGAGGCTTTGTGGAATATACCAAAAACAGACGTTTGTGTGCTCAGGCTCGCAGTCAACCAGGATCTaGTCCAGGGACTCGGGGTGG +
Preference number: 4 (lower is better)
Translates to: PLRLCGIYQKQTFVCSGSQSTRI*SRDSGW
Trigger: CCACCCCGAGTCCCTGGAGCAGATCCTGGTTGACTG...CGAGCCTGAGCACACAAACGTCTGTTTTTGGTATATTCCACAAAGCCTCAGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR GCA 90 bp TTTTCCTTGGGAGGCCCCTGGAAATTTAGGAGGAAGACCCTTGGAAACCATGTGAAATCACGAGGCCGTTaGTCGCGGGGGCAGCTAGTC +
Preference number: 4 (lower is better)
Translates to: FSLGGPWKFRRKTLGNHVKSRGR*SRGQLV
Trigger: GACTAGCTGCCCCCGCGAGCAACGGCCTCGTGATTT...CACATGGTTTCCAAGGGTCTTCCTCCTAAATTTCCAGGGGCCTCCCAAGGAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375272.5
CDS-3UTR GCA 90 bp GGTCTTCGGAAATGTTGCCTTAGGTTTCAGCTAAGCGAGTCACAGAGATTGGTCTCTCGAGTCTGGCGGTaGATCGGCGCGACCTGGAGT +
Preference number: 4 (lower is better)
Translates to: GLRKCCLRFQLSESQRLVSRVWR*IGATWS
Trigger: ACTCCAGGTCGCGCCGATGCACCGCCAGACTCGAGA...GACCAATCTCTGTGACTCGCTTAGCTGAAACCTAAGGCAACATTTCCGAAGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493875.5
CDS-3UTR GCA 90 bp CGGAAATGTTGCCTTAGGTTTCAGCTAAGCGAGTCACAGAGATTGGTCATCAACGAAAGGCAGCGAGCCTaGCTGGTAGGGGTGCGCAGG +
Preference number: 4 (lower is better)
Translates to: RKCCLRFQLSESQRLVINERQRA*LVGVRR
Trigger: CCTGCGCACCCCTACCAGGCAGGCTCGCTGCCTTTC...GTTGATGACCAATCTCTGTGACTCGCTTAGCTGAAACCTAAGGCAACATTTCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493875.5
CDS-3UTR CCA 90 bp TGTCCATTTTCCTTGGGAGGCCCCTGGAAATTTAGGAGGAAGACCCTTGGAAACTCCAGAGTCCTCGACTaGTCCGGCGCAGAAACAGGC +
Preference number: 4 (lower is better)
Translates to: CPFSLGGPWKFRRKTLGNSRVLD*SGAETG
Trigger: GCCTGTTTCTGCGCCGGACCAGTCGAGGACTCTGGA...GTTTCCAAGGGTCTTCCTCCTAAATTTCCAGGGGCCTCCCAAGGAAAATGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344257.9
ENST00000375272.5
CDS-3UTR CCA 90 bp GGAGACATCATACTGCTTGTCTGGCTGGAAGAGGTATCCTGCACACATCTGGTTTCCAGAGTCCTCGACTaGTCCGGCGCAGAAACAGGC +
Preference number: 4 (lower is better)
Translates to: GDIILLVWLEEVSCTHLVSRVLD*SGAETG
Trigger: GCCTGTTTCTGCGCCGGACCAGTCGAGGACTCTGGA...AACCAGATGTGTGCAGGATACCTCTTCCAGCCAGACAAGCAGTATGATGTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CCA 90 bp TCATACTGCTTGTCTGGCTGGAAGAGGTATCCTGCACACATCTGGTTGCATCCTTCCAGAGTCCTCGACTaGTCCGGCGCAGAAACAGGC +
Preference number: 4 (lower is better)
Translates to: SYCLSGWKRYPAHIWLHPSRVLD*SGAETG
Trigger: GCCTGTTTCTGCGCCGGACCAGTCGAGGACTCTGGA...AGGATGCAACCAGATGTGTGCAGGATACCTCTTCCAGCCAGACAAGCAGTATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CCA 90 bp CACGTGGCGGCCACACTGAATTGCCTTGTCCCCGGTGTCGTAGGAGACATCATAAGTCCAGCACCTTGGTaGAGCGATCAAATGTCTTGC +
Preference number: 4 (lower is better)
Translates to: HVAATLNCLVPGVVGDIISPAPW*SDQMSC
Trigger: GCAAGACATTTGATCGCTCCACCAAGGTGCTGGACT...TATGATGTCTCCTACGACACCGGGGACAAGGCAATTCAGTGTGGCCGCCACGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CCA 90 bp CCTTGTCCCCTTGGGGCTGGTAGCCAACCATGGTCGTACCTGACTCCATCATCATTCCAGCAACTGGTGTaGGTGATGAAAGTCCAGCAC +
Preference number: 4 (lower is better)
Translates to: PCPLGAGSQPWSYLTPSSFQQLV*VMKVQH
Trigger: GTGCTGGACTTTCATCACCCACACCAGTTGCTGGAA...TGATGATGGAGTCAGGTACGACCATGGTTGGCTACCAGCCCCAAGGGGACAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp GTCCATTTTCCTTGGGAGGCCCCTGGAAATTTAGGAGGAAGACCCTTGGAAACCAGGATTGCCTCTCCTTaGAGGCACTCACAAGGCGAC +
Preference number: 4 (lower is better)
Translates to: VHFPWEAPGNLGGRPLETRIASP*RHSQGD
Trigger: GTCGCCTTGTGAGTGCCTTCAAGGAGAGGCAATCCT...GGTTTCCAAGGGTCTTCCTCCTAAATTTCCAGGGGCCTCCCAAGGAAAATGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344257.9
ENST00000375272.5
CDS-3UTR TCA 90 bp CCTTGTCCCCTTGGGGCTGGTAGCCAACCATGGTCGTACCTGACTCCATCATCATGTAGCGAGCAGCCATaGTGCTGTACATGTTGGATA +
Preference number: 4 (lower is better)
Translates to: PCPLGAGSQPWSYLTPSSCSEQP*CCTCWI
Trigger: TATCCAACATGTACAGCATCATGGCTGCTCGCTACA...TGATGATGGAGTCAGGTACGACCATGGTTGGCTACCAGCCCCAAGGGGACAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp GGTCGATTCTCACCAACAGCATTTCCCTCGGCCCCTAGGACATGGCGTTTTGAACCCTTTCTATGCCGTTaGGTTTATGGCGGTGCTTCC +
Preference number: 4 (lower is better)
Translates to: GRFSPTAFPSAPRTWRFEPFLCR*VYGGAS
Trigger: GGAAGCACCGCCATAAACTCAACGGCATAGAAAGGG...TTCAAAACGCCATGTCCTAGGGGCCGAGGGAAATGCTGTTGGTGAGAATCGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp CACGTGGCGGCCACACTGAATTGCCTTGTCCCCGGTGTCGTAGGAGACATCATAGTATACCCTTTTCCTTaGCGAGAATGGCAGAGCACT +
Preference number: 4 (lower is better)
Translates to: HVAATLNCLVPGVVGDIIVYPFP*REWQST
Trigger: AGTGCTCTGCCATTCTCGTCAAGGAAAAGGGTATAC...TATGATGTCTCCTACGACACCGGGGACAAGGCAATTCAGTGTGGCCGCCACGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp GGTCGATTCTCACCAACAGCATTTCCCTCGGCCCCTAGGACATGGCGTTTTGAAACATCAGCCAGAACTTaGAGATATCCACGTGGCGGC +
Preference number: 4 (lower is better)
Translates to: GRFSPTAFPSAPRTWRFETSART*RYPRGG
Trigger: GCCGCCACGTGGATATCTTCAAGTTCTGGCTGATGT...TTCAAAACGCCATGTCCTAGGGGCCGAGGGAAATGCTGTTGGTGAGAATCGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp TTTGTGTGCTCAGGCTCGCCATTGAAAACCATCTCAAATTCTTCTCTGTTTTTAGCACACCGGAGGGACTaGGCAGCCGGGGGCACGGAG +
Preference number: 4 (lower is better)
Translates to: FVCSGSPLKTISNSSLFLAHRRD*AAGGTE
Trigger: CTCCGTGCCCCCGGCTGCTCAGTCCCTCCGGTGTGC...TAAAAACAGAGAAGAATTTGAGATGGTTTTCAATGGCGAGCCTGAGCACACAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000493875.5
CDS-3UTR GCA 90 bp TGTCCATTTTCCTTGGGAGGCCCCTGGAAATTTAGGAGGAAGACCCTTGGAAACGGCGTCACCTCCAGCTaGTTCCTCGTTCTCGCTAGT +
Preference number: 4 (lower is better)
Translates to: CPFSLGGPWKFRRKTLGNGVTSS*FLVLAS
Trigger: ACTAGCGAGAACGAGGAAGCAGCTGGAGGTGACGCC...GTTTCCAAGGGTCTTCCTCCTAAATTTCCAGGGGCCTCCCAAGGAAAATGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344257.9
ENST00000375272.5
CDS-3UTR GCA 90 bp GTGTGCAGTTACCATCACCTCTGGAGGTCACAATCATGCTTTGGTTCTGCTCTGGGCGTCACCTCCAGCTaGTTCCTCGTTCTCGCTAGT +
Preference number: 4 (lower is better)
Translates to: VCSYHHLWRSQSCFGSALGVTSS*FLVLAS
Trigger: ACTAGCGAGAACGAGGAAGCAGCTGGAGGTGACGCC...CAGAGCAGAACCAAAGCATGATTGTGACCTCCAGAGGTGATGGTAACTGCACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344257.9
ENST00000375272.5
CDS-3UTR GCA 90 bp AAAGCATTGAGAACACCAGACGTACAGCCAGACAGAGAGCGTAAGAGAAGAGCACGCGTTCGAGGAGGTTaGGGACGAAGATGGGGTCGA +
Preference number: 4 (lower is better)
Translates to: KALRTPDVQPDRERKRRARVRGG*GRRWGR
Trigger: TCGACCCCATCTTCGTCCGCAACCTCCTCGAACGCG...TGCTCTTCTCTTACGCTCTCTGTCTGGCTGTACGTCTGGTGTTCTCAATGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR GCA 90 bp GGTCTTCGGAAATGTTGCCTTAGGTTTCAGCTAAGCGAGTCACAGAGATTGGTCCGCGTTCGAGGAGGTTaGGGACGAAGATGGGGTCGA +
Preference number: 4 (lower is better)
Translates to: GLRKCCLRFQLSESQRLVRVRGG*GRRWGR
Trigger: TCGACCCCATCTTCGTCCGCAACCTCCTCGAACGCG...GACCAATCTCTGTGACTCGCTTAGCTGAAACCTAAGGCAACATTTCCGAAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR GCA 90 bp AAACCATGTGTGCAGTTACCATCACCTCTGGAGGTCACAATCATGCTTTGGTTCGCCCCAGTTTTCTGGTaGATCCATGGGCCACGCCGC +
Preference number: 4 (lower is better)
Translates to: KPCVQLPSPLEVTIMLWFAPVFW*IHGPRR
Trigger: GCGGCGTGGCCCATGGATGCACCAGAAAACTGGGGC...GAACCAAAGCATGATTGTGACCTCCAGAGGTGATGGTAACTGCACACATGGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344257.9
ENST00000375272.5
CDS-3UTR GCA 90 bp ACAATCATTGAAATCATGACACATAGTCTCCCCCTCCCACCACCAAGGTCAGACAGAAGTCAGTCTCTGTaGGCCGGAAGCGGGCATCCC +
Preference number: 4 (lower is better)
Translates to: TIIEIMTHSLPLPPPRSDRSQSL*AGSGHP
Trigger: GGGATGCCCGCTTCCGGCGCACAGAGACTGACTTCT...GTCTGACCTTGGTGGTGGGAGGGGGAGACTATGTGTCATGATTTCAATGATTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR GCA 90 bp ACAATCATTGAAATCATGACACATAGTCTCCCCCTCCCACCACCAAGGTCAGACCAGTCAACCAGGATCTaGTCCAGGGACTCGGGGTGG +
Preference number: 4 (lower is better)
Translates to: TIIEIMTHSLPLPPPRSDQSTRI*SRDSGW
Trigger: CCACCCCGAGTCCCTGGAGCAGATCCTGGTTGACTG...GTCTGACCTTGGTGGTGGGAGGGGGAGACTATGTGTCATGATTTCAATGATTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR GCA 90 bp GGTCGATTCTCACCAACAGCATTTCCCTCGGCCCCTAGGACATGGCGTTTTGAAAGAATGGCAGAGCACTaGAACAGCACGCCCATCATC +
Preference number: 4 (lower is better)
Translates to: GRFSPTAFPSAPRTWRFERMAEH*NSTPII
Trigger: GATGATGGGCGTGCTGTTGCAGTGCTCTGCCATTCT...TTCAAAACGCCATGTCCTAGGGGCCGAGGGAAATGCTGTTGGTGAGAATCGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR GCA 90 bp GTGACTGAGTTGGCCCTTTCTATGCCGTTGAGTTTATGGCGGTGCTTCCTGGACAGAATGGCAGAGCACTaGAACAGCACGCCCATCATC +
Preference number: 4 (lower is better)
Translates to: VTELALSMPLSLWRCFLDRMAEH*NSTPII
Trigger: GATGATGGGCGTGCTGTTGCAGTGCTCTGCCATTCT...GTCCAGGAAGCACCGCCATAAACTCAACGGCATAGAAAGGGCCAACTCAGTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414527.6
CDS-3UTR GCA 90 bp CATACTGCTTGTCTGGCTGGAAGAGGTATCCTGCACACATCTGGTTGCATCCTTGCGGCCACACTGAATTaGCTTGTCCCCGGTGTCGTA +
Preference number: 4 (lower is better)
Translates to: HTACLAGRGILHTSGCILAATLN*LVPGVV
Trigger: TACGACACCGGGGACAAGGCAATTCAGTGTGGCCGC...AAGGATGCAACCAGATGTGTGCAGGATACCTCTTCCAGCCAGACAAGCAGTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CCA 90 bp GTGTGCAGTTACCATCACCTCTGGAGGTCACAATCATGCTTTGGTTCTGCTCTGTTTCTGGTGCATCCATaGGCCACGCCGCACCAGGTA +
Preference number: 4 (lower is better)
Translates to: VCSYHHLWRSQSCFGSALFLVHP*ATPHQV
Trigger: TACCTGGTGCGGCGTGGCCCATGGATGCACCAGAAA...CAGAGCAGAACCAAAGCATGATTGTGACCTCCAGAGGTGATGGTAACTGCACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344257.9
ENST00000375272.5
CDS-3UTR CCA 90 bp TCATCCATCATCACTTCAGGTGGAGAAACGCTGACAGTGAGGTCGATTCTCACCTTTCTGGTGCATCCATaGGCCACGCCGCACCAGGTA +
Preference number: 4 (lower is better)
Translates to: SSIITSGGETLTVRSILTFLVHP*ATPHQV
Trigger: TACCTGGTGCGGCGTGGCCCATGGATGCACCAGAAA...GGTGAGAATCGACCTCACTGTCAGCGTTTCTCCACCTGAAGTGATGATGGATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CCA 90 bp GGTCGATTCTCACCAACAGCATTTCCCTCGGCCCCTAGGACATGGCGTTTTGAATCTCTTCCAGGCTGTTaGTCCTTTGCAAGAAGCCGC +
Preference number: 4 (lower is better)
Translates to: GRFSPTAFPSAPRTWRFESLPGC*SFARSR
Trigger: GCGGCTTCTTGCAAAGGACCAACAGCCTGGAAGAGA...TTCAAAACGCCATGTCCTAGGGGCCGAGGGAAATGCTGTTGGTGAGAATCGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CCA 90 bp TGTCCATTTTCCTTGGGAGGCCCCTGGAAATTTAGGAGGAAGACCCTTGGAAACTCCAGGGACTCGGGGTaGTCAGAGAGCTCCAAGTTG +
Preference number: 4 (lower is better)
Translates to: CPFSLGGPWKFRRKTLGNSRDSG*SESSKL
Trigger: CAACTTGGAGCTCTCTGACCACCCCGAGTCCCTGGA...GTTTCCAAGGGTCTTCCTCCTAAATTTCCAGGGGCCTCCCAAGGAAAATGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344257.9
ENST00000375272.5
CDS-3UTR CCA 90 bp GTGTGCAGTTACCATCACCTCTGGAGGTCACAATCATGCTTTGGTTCTGCTCTGTCCAGGGACTCGGGGTaGTCAGAGAGCTCCAAGTTG +
Preference number: 4 (lower is better)
Translates to: VCSYHHLWRSQSCFGSALSRDSG*SESSKL
Trigger: CAACTTGGAGCTCTCTGACCACCCCGAGTCCCTGGA...CAGAGCAGAACCAAAGCATGATTGTGACCTCCAGAGGTGATGGTAACTGCACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344257.9
ENST00000375272.5
CDS-3UTR CCA 90 bp TCATCCATCATCACTTCAGGTGGAGAAACGCTGACAGTGAGGTCGATTCTCACCTCGTTGAGGGCTGTCTaGCACACCCCTGAGGCTTTG +
Preference number: 4 (lower is better)
Translates to: SSIITSGGETLTVRSILTSLRAV*HTPEAL
Trigger: CAAAGCCTCAGGGGTGTGCCAGACAGCCCTCAACGA...GGTGAGAATCGACCTCACTGTCAGCGTTTCTCCACCTGAAGTGATGATGGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CCA 90 bp TCATACTGCTTGTCTGGCTGGAAGAGGTATCCTGCACACATCTGGTTGCATCCTCCATCCGGAAGAAGTTaGCCTTGTCCCCTTGGGGCT +
Preference number: 4 (lower is better)
Translates to: SYCLSGWKRYPAHIWLHPPSGRS*PCPLGA
Trigger: AGCCCCAAGGGGACAAGGCCAACTTCTTCCGGATGG...AGGATGCAACCAGATGTGTGCAGGATACCTCTTCCAGCCAGACAAGCAGTATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CCA 90 bp CCCCTGAGGCTTTGTGGAATATACCAAAAACAGACGTTTGTGTGCTCAGGCTCGAGACTGGGTAGCGGCTaGGTTGGAGATGACCATCCG +
Preference number: 4 (lower is better)
Translates to: PLRLCGIYQKQTFVCSGSRLGSG*VGDDHP
Trigger: CGGATGGTCATCTCCAACCCAGCCGCTACCCAGTCT...CGAGCCTGAGCACACAAACGTCTGTTTTTGGTATATTCCACAAAGCCTCAGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CCA 90 bp TGGCCTTGTCCCCTTGGGGCTGGTAGCCAACCATGGTCGTACCTGACTCCATCATATAGAGGTTTGTTCTaGAGTGCCAGAGGGAAAAGG +
Preference number: 4 (lower is better)
Translates to: WPCPLGAGSQPWSYLTPSYRGLF*SARGKR
Trigger: CCTTTTCCCTCTGGCACTCCAGAACAAACCTCTATA...TGATGGAGTCAGGTACGACCATGGTTGGCTACCAGCCCCAAGGGGACAAGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CCA 90 bp CCTTGTCCCCTTGGGGCTGGTAGCCAACCATGGTCGTACCTGACTCCATCATCATTTTCCTGGAGTTGTTaGACAAGCTGGTTGGCAGCA +
Preference number: 4 (lower is better)
Translates to: PCPLGAGSQPWSYLTPSSFSWSC*TSWLAA
Trigger: TGCTGCCAACCAGCTTGTCCAACAACTCCAGGAAAA...TGATGATGGAGTCAGGTACGACCATGGTTGGCTACCAGCCCCAAGGGGACAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CCA 90 bp CTGCTTGTCTGGCTGGAAGAGGTATCCTGCACACATCTGGTTGCATCCTTGGAGGTCTGGTTCGGTGTCTaGTTCCCGTTGTTGTGTCTG +
Preference number: 4 (lower is better)
Translates to: LLVWLEEVSCTHLVASLEVWFGV*FPLLCL
Trigger: CAGACACAACAACGGGAACCAGACACCGAACCAGAC...CTCCAAGGATGCAACCAGATGTGTGCAGGATACCTCTTCCAGCCAGACAAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493875.5
CDS-3UTR CCA 90 bp CGGAAATGTTGCCTTAGGTTTCAGCTAAGCGAGTCACAGAGATTGGTCATCAACTGCATCGGCGCGACCTaGAGTGAAGCGCCGAGACGA +
Preference number: 4 (lower is better)
Translates to: RKCCLRFQLSESQRLVINCIGAT*SEAPRR
Trigger: TCGTCTCGGCGCTTCACTCCAGGTCGCGCCGATGCA...GTTGATGACCAATCTCTGTGACTCGCTTAGCTGAAACCTAAGGCAACATTTCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493875.5
3UTR CAA 72 bp CCTTGGGAGGCCCCTGGAAATTTAGGAGGAAGACCCTaGGAAACCATGTGTGCAGTTACCATCACCTCTGGA +
Preference number: 4 (lower is better)
Translates to: PWEAPGNLGGRP*ETMCAVTITSG
Trigger: TCCAGAGGTGATGGTAACTGCACACATGGTTTCCAAGGGTCTTCCTCCTAAATTTCCAGGGGCCTCCCAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344257.9
ENST00000375272.5
3UTR CAA 72 bp CCGTCGTTGAGGGCTGTCTGGCACACCCCTGAGGCTTaGTGGAATATACCAAAAACAGACGTTTGTGTGCTC +
Preference number: 4 (lower is better)
Translates to: PSLRAVWHTPEA*WNIPKTDVCVL
Trigger: GAGCACACAAACGTCTGTTTTTGGTATATTCCACAAAGCCTCAGGGGTGTGCCAGACAGCCCTCAACGACGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp CCATGTGTGCAGTTACCATCACCTCTGGAGGTCACAATCATGCTTTGGTTCTGCAGAAGCCGCAGATCTTaGGCCCCAGTTTTCTGGTGC +
Preference number: 4 (lower is better)
Translates to: PCVQLPSPLEVTIMLWFCRSRRS*APVFWC
Trigger: GCACCAGAAAACTGGGGCTCAAGATCTGCGGCTTCT...GCAGAACCAAAGCATGATTGTGACCTCCAGAGGTGATGGTAACTGCACACATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344257.9
ENST00000375272.5
CDS-3UTR TCA 90 bp CCCCTGAGGCTTTGTGGAATATACCAAAAACAGACGTTTGTGTGCTCAGGCTCGAGGATTGCCTCTCCTTaGAGGCACTCACAAGGCGAC +
Preference number: 4 (lower is better)
Translates to: PLRLCGIYQKQTFVCSGSRIASP*RHSQGD
Trigger: GTCGCCTTGTGAGTGCCTTCAAGGAGAGGCAATCCT...CGAGCCTGAGCACACAAACGTCTGTTTTTGGTATATTCCACAAAGCCTCAGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp GTGTGCAGTTACCATCACCTCTGGAGGTCACAATCATGCTTTGGTTCTGCTCTGCAGAGAGCTCCAAGTTaGAGCCCTCCATGCCTTCCA +
Preference number: 4 (lower is better)
Translates to: VCSYHHLWRSQSCFGSALQRAPS*SPPCLP
Trigger: TGGAAGGCATGGAGGGCTTCAACTTGGAGCTCTCTG...CAGAGCAGAACCAAAGCATGATTGTGACCTCCAGAGGTGATGGTAACTGCACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344257.9
ENST00000375272.5
CDS-3UTR TCA 90 bp TTTTCCTTGGGAGGCCCCTGGAAATTTAGGAGGAAGACCCTTGGAAACCATGTGCAGAGAGCTCCAAGTTaGAGCCCTCCATGCCTTCCA +
Preference number: 4 (lower is better)
Translates to: FSLGGPWKFRRKTLGNHVQRAPS*SPPCLP
Trigger: TGGAAGGCATGGAGGGCTTCAACTTGGAGCTCTCTG...CACATGGTTTCCAAGGGTCTTCCTCCTAAATTTCCAGGGGCCTCCCAAGGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344257.9
ENST00000375272.5
CDS-3UTR TCA 90 bp CCCCTGAGGCTTTGTGGAATATACCAAAAACAGACGTTTGTGTGCTCAGGCTCGAGGGTTCCAGGTGACTaGGTTGGCCCTTTCTATGCC +
Preference number: 4 (lower is better)
Translates to: PLRLCGIYQKQTFVCSGSRVPGD*VGPFYA
Trigger: GGCATAGAAAGGGCCAACTCAGTCACCTGGAACCCT...CGAGCCTGAGCACACAAACGTCTGTTTTTGGTATATTCCACAAAGCCTCAGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp CCCCTGAGGCTTTGTGGAATATACCAAAAACAGACGTTTGTGTGCTCAGGCTCGACGCCCATCATCTTGTaGGGGTTCCAGGTGACTGAG +
Preference number: 4 (lower is better)
Translates to: PLRLCGIYQKQTFVCSGSTPIIL*GFQVTE
Trigger: CTCAGTCACCTGGAACCCTCACAAGATGATGGGCGT...CGAGCCTGAGCACACAAACGTCTGTTTTTGGTATATTCCACAAAGCCTCAGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp TGCACTTTATCAAAATCACATTGTCAGTTCCAAAGCCAAGTGCAGCCCCAGCTTACGTGGCGGCCACACTaGATTGCCTTGTCCCCGGTG +
Preference number: 4 (lower is better)
Translates to: CTLSKSHCQFQSQVQPQLTWRPH*IALSPV
Trigger: CACCGGGGACAAGGCAATTCAGTGTGGCCGCCACGT...AAGCTGGGGCTGCACTTGGCTTTGGAACTGACAATGTGATTTTGATAAAGTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000414527.6
CDS-3UTR TCA 90 bp ACAATCATTGAAATCATGACACATAGTCTCCCCCTCCCACCACCAAGGTCAGACCGGCTGGGTTGGAGATaGCCATCCGGAAGAAGTTGG +
Preference number: 4 (lower is better)
Translates to: TIIEIMTHSLPLPPPRSDRLGWR*PSGRSW
Trigger: CCAACTTCTTCCGGATGGTCATCTCCAACCCAGCCG...GTCTGACCTTGGTGGTGGGAGGGGGAGACTATGTGTCATGATTTCAATGATTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp CTGCTTGTCTGGCTGGAAGAGGTATCCTGCACACATCTGGTTGCATCCTTGGAGCTAATGGGGAGGGTGTaGCTTGTCATTTGGTGGTGT +
Preference number: 4 (lower is better)
Translates to: LLVWLEEVSCTHLVASLELMGRV*LVIWWC
Trigger: ACACCACCAAATGACAAGTCACACCCTCCCCATTAG...CTCCAAGGATGCAACCAGATGTGTGCAGGATACCTCTTCCAGCCAGACAAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp CACGTGGCGGCCACACTGAATTGCCTTGTCCCCGGTGTCGTAGGAGACATCATACCTGGTCACTTTATCTaGGATCTTCAGAAGGTCTTC +
Preference number: 4 (lower is better)
Translates to: HVAATLNCLVPGVVGDIIPGHFI*DLQKVF
Trigger: GAAGACCTTCTGAAGATCTCAGATAAAGTGACCAGG...TATGATGTCTCCTACGACACCGGGGACAAGGCAATTCAGTGTGGCCGCCACGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493875.5
ENST00000625689.2
CDS-3UTR GCA 90 bp AGAATATGTCCATTTTCCTTGGGAGGCCCCTGGAAATTTAGGAGGAAGACCCTTCTGACAGGCGTAATCTaGCCGGCGTCACCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: RICPFSLGGPWKFRRKTLLTGVI*PASPPA
Trigger: AGCTGGAGGTGACGCCGGGCAGATTACGCCTGTCAG...AAGGGTCTTCCTCCTAAATTTCCAGGGGCCTCCCAAGGAAAATGGACATATTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344257.9
ENST00000375272.5
CDS-3UTR GCA 90 bp AACCATGTGTGCAGTTACCATCACCTCTGGAGGTCACAATCATGCTTTGGTTCTCGCGTTCGAGGAGGTTaGGGACGAAGATGGGGTCGA +
Preference number: 4 (lower is better)
Translates to: NHVCSYHHLWRSQSCFGSRVRGG*GRRWGR
Trigger: TCGACCCCATCTTCGTCCGCAACCTCCTCGAACGCG...AGAACCAAAGCATGATTGTGACCTCCAGAGGTGATGGTAACTGCACACATGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344257.9
ENST00000375272.5
CDS-3UTR GCA 90 bp TGCACTTTATCAAAATCACATTGTCAGTTCCAAAGCCAAGTGCAGCCCCAGCTTGCCCCAGTTTTCTGGTaGATCCATGGGCCACGCCGC +
Preference number: 4 (lower is better)
Translates to: CTLSKSHCQFQSQVQPQLAPVFW*IHGPRR
Trigger: GCGGCGTGGCCCATGGATGCACCAGAAAACTGGGGC...AAGCTGGGGCTGCACTTGGCTTTGGAACTGACAATGTGATTTTGATAAAGTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000414527.6
CDS-3UTR GCA 90 bp GGTCGATTCTCACCAACAGCATTTCCCTCGGCCCCTAGGACATGGCGTTTTGAAAGGTTCTTGGAGGATTaGCTCTCCTTGAAGGCACTC +
Preference number: 4 (lower is better)
Translates to: GRFSPTAFPSAPRTWRFERFLED*LSLKAL
Trigger: GAGTGCCTTCAAGGAGAGGCAATCCTCCAAGAACCT...TTCAAAACGCCATGTCCTAGGGGCCGAGGGAAATGCTGTTGGTGAGAATCGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR GCA 90 bp AGAACACCAGACGTACAGCCAGACAGAGAGCGTAAGAGAAGAGCAGATGCTATTGCGGCCACACTGAATTaGCTTGTCCCCGGTGTCGTA +
Preference number: 4 (lower is better)
Translates to: RTPDVQPDRERKRRADAIAATLN*LVPGVV
Trigger: TACGACACCGGGGACAAGGCAATTCAGTGTGGCCGC...AATAGCATCTGCTCTTCTCTTACGCTCTCTGTCTGGCTGTACGTCTGGTGTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR GCA 90 bp CACGTGGCGGCCACACTGAATTGCCTTGTCCCCGGTGTCGTAGGAGACATCATAAAACAGACGTTTGTGTaGTCAGGCTCGCCATTGAAA +
Preference number: 4 (lower is better)
Translates to: HVAATLNCLVPGVVGDIIKQTFV*SGSPLK
Trigger: TTTCAATGGCGAGCCTGAGCACACAAACGTCTGTTT...TATGATGTCTCCTACGACACCGGGGACAAGGCAATTCAGTGTGGCCGCCACGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR GCA 90 bp CCTTGTCCCCTTGGGGCTGGTAGCCAACCATGGTCGTACCTGACTCCATCATCAAAACAGACGTTTGTGTaGTCAGGCTCGCCATTGAAA +
Preference number: 4 (lower is better)
Translates to: PCPLGAGSQPWSYLTPSSKQTFV*SGSPLK
Trigger: TTTCAATGGCGAGCCTGAGCACACAAACGTCTGTTT...TGATGATGGAGTCAGGTACGACCATGGTTGGCTACCAGCCCCAAGGGGACAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR GCA 90 bp ATAAACTCATGTTCTGCGAAGGATGATTACAGATCCTGGCCCAGTCTTTCTATCGGGCTCCTCTGCAGGTaGCTGACCGCCTCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: INSCSAKDDYRSWPSLSIGLLCR*LTASGA
Trigger: AGCTCCAGAGGCGGTCAGGCACCTGCAGAGGAGCCC...GATAGAAAGACTGGGCCAGGATCTGTAATCATCCTTCGCAGAACATGAGTTTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000625689.2
CDS-3UTR CCA 90 bp AAAGAATATGTCCATTTTCCTTGGGAGGCCCCTGGAAATTTAGGAGGAAGACCCTCCAGAGTCCTCGACTaGTCCGGCGCAGAAACAGGC +
Preference number: 4 (lower is better)
Translates to: KEYVHFPWEAPGNLGGRPSRVLD*SGAETG
Trigger: GCCTGTTTCTGCGCCGGACCAGTCGAGGACTCTGGA...GGGTCTTCCTCCTAAATTTCCAGGGGCCTCCCAAGGAAAATGGACATATTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344257.9
ENST00000375272.5
CDS-3UTR CCA 90 bp CGGAAATGTTGCCTTAGGTTTCAGCTAAGCGAGTCACAGAGATTGGTCATCAACTCCAGAGTCCTCGACTaGTCCGGCGCAGAAACAGGC +
Preference number: 4 (lower is better)
Translates to: RKCCLRFQLSESQRLVINSRVLD*SGAETG
Trigger: GCCTGTTTCTGCGCCGGACCAGTCGAGGACTCTGGA...GTTGATGACCAATCTCTGTGACTCGCTTAGCTGAAACCTAAGGCAACATTTCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CCA 90 bp TGTGTGCAGTTACCATCACCTCTGGAGGTCACAATCATGCTTTGGTTCTGCTCTGGTTGCGGACGAAGATaGGGTCGAAGACGCCATCAG +
Preference number: 4 (lower is better)
Translates to: CVQLPSPLEVTIMLWFCSGCGRR*GRRRHQ
Trigger: CTGATGGCGTCTTCGACCCCATCTTCGTCCGCAACC...AGAGCAGAACCAAAGCATGATTGTGACCTCCAGAGGTGATGGTAACTGCACACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344257.9
ENST00000375272.5
CDS-3UTR CCA 90 bp AAAGCATTGAGAACACCAGACGTACAGCCAGACAGAGAGCGTAAGAGAAGAGCAGGTTGCGGACGAAGATaGGGTCGAAGACGCCATCAG +
Preference number: 4 (lower is better)
Translates to: KALRTPDVQPDRERKRRAGCGRR*GRRRHQ
Trigger: CTGATGGCGTCTTCGACCCCATCTTCGTCCGCAACC...TGCTCTTCTCTTACGCTCTCTGTCTGGCTGTACGTCTGGTGTTCTCAATGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CCA 90 bp AGAACACCAGACGTACAGCCAGACAGAGAGCGTAAGAGAAGAGCAGATGCTATTTTTCTGGTGCATCCATaGGCCACGCCGCACCAGGTA +
Preference number: 4 (lower is better)
Translates to: RTPDVQPDRERKRRADAIFLVHP*ATPHQV
Trigger: TACCTGGTGCGGCGTGGCCCATGGATGCACCAGAAA...AATAGCATCTGCTCTTCTCTTACGCTCTCTGTCTGGCTGTACGTCTGGTGTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CCA 90 bp GGTCGATTCTCACCAACAGCATTTCCCTCGGCCCCTAGGACATGGCGTTTTGAAAGTCCAGCACCTTGGTaGAGCGATCAAATGTCTTGC +
Preference number: 4 (lower is better)
Translates to: GRFSPTAFPSAPRTWRFESPAPW*SDQMSC
Trigger: GCAAGACATTTGATCGCTCCACCAAGGTGCTGGACT...TTCAAAACGCCATGTCCTAGGGGCCGAGGGAAATGCTGTTGGTGAGAATCGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CCA 90 bp CTTTCTATGCCGTTGAGTTTATGGCGGTGCTTCCTGGACATGAGCAGCCCACCTAGTCCAGCACCTTGGTaGAGCGATCAAATGTCTTGC +
Preference number: 4 (lower is better)
Translates to: LSMPLSLWRCFLDMSSPPSPAPW*SDQMSC
Trigger: GCAAGACATTTGATCGCTCCACCAAGGTGCTGGACT...AGGTGGGCTGCTCATGTCCAGGAAGCACCGCCATAAACTCAACGGCATAGAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414527.6
CDS-3UTR CCA 90 bp GGTCGATTCTCACCAACAGCATTTCCCTCGGCCCCTAGGACATGGCGTTTTGAATTCCAGCAACTGGTGTaGGTGATGAAAGTCCAGCAC +
Preference number: 4 (lower is better)
Translates to: GRFSPTAFPSAPRTWRFEFQQLV*VMKVQH
Trigger: GTGCTGGACTTTCATCACCCACACCAGTTGCTGGAA...TTCAAAACGCCATGTCCTAGGGGCCGAGGGAAATGCTGTTGGTGAGAATCGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CCA 90 bp GGTCTTCGGAAATGTTGCCTTAGGTTTCAGCTAAGCGAGTCACAGAGATTGGTCTCCAGGGACTCGGGGTaGTCAGAGAGCTCCAAGTTG +
Preference number: 4 (lower is better)
Translates to: GLRKCCLRFQLSESQRLVSRDSG*SESSKL
Trigger: CAACTTGGAGCTCTCTGACCACCCCGAGTCCCTGGA...GACCAATCTCTGTGACTCGCTTAGCTGAAACCTAAGGCAACATTTCCGAAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CCA 90 bp GGTCGATTCTCACCAACAGCATTTCCCTCGGCCCCTAGGACATGGCGTTTTGAAATGCCGTTGAGTTTATaGCGGTGCTTCCTGGACATG +
Preference number: 4 (lower is better)
Translates to: GRFSPTAFPSAPRTWRFEMPLSL*RCFLDM
Trigger: CATGTCCAGGAAGCACCGCCATAAACTCAACGGCAT...TTCAAAACGCCATGTCCTAGGGGCCGAGGGAAATGCTGTTGGTGAGAATCGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CCA 90 bp TGGCCTTGTCCCCTTGGGGCTGGTAGCCAACCATGGTCGTACCTGACTCCATCATATCCTGCACACATCTaGTTGCATCCTTGGAGTATA +
Preference number: 4 (lower is better)
Translates to: WPCPLGAGSQPWSYLTPSYPAHI*LHPWSI
Trigger: TATACTCCAAGGATGCAACCAGATGTGTGCAGGATA...TGATGGAGTCAGGTACGACCATGGTTGGCTACCAGCCCCAAGGGGACAAGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CCA 90 bp TTGGAGCCACCTTGTGTAGCTTTTCCCGTCGTTGAGGGCTGTCTGGCACACCCCTATCCTGCACACATCTaGTTGCATCCTTGGAGTATA +
Preference number: 4 (lower is better)
Translates to: LEPPCVAFPVVEGCLAHPYPAHI*LHPWSI
Trigger: TATACTCCAAGGATGCAACCAGATGTGTGCAGGATA...GGGGTGTGCCAGACAGCCCTCAACGACGGGAAAAGCTACACAAGGTGGCTCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CCA 90 bp CTGCTTGTCTGGCTGGAAGAGGTATCCTGCACACATCTGGTTGCATCCTTGGAGTACTGCTTGTCTGGCTaGAAGAGGTATCCTGCACAC +
Preference number: 4 (lower is better)
Translates to: LLVWLEEVSCTHLVASLEYCLSG*KRYPAH
Trigger: GTGTGCAGGATACCTCTTCCAGCCAGACAAGCAGTA...CTCCAAGGATGCAACCAGATGTGTGCAGGATACCTCTTCCAGCCAGACAAGCAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CCA 90 bp GTCCATTTTCCTTGGGAGGCCCCTGGAAATTTAGGAGGAAGACCCTTGGAAACCGTGCCTGACCGCCTCTaGAGCTTTATAGGGCGATTA +
Preference number: 4 (lower is better)
Translates to: VHFPWEAPGNLGGRPLETVPDRL*SFIGRL
Trigger: TAATCGCCCTATAAAGCTCCAGAGGCGGTCAGGCAC...GGTTTCCAAGGGTCTTCCTCCTAAATTTCCAGGGGCCTCCCAAGGAAAATGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375272.5
CDS-3UTR CCA 90 bp GTGACTGAGTTGGCCCTTTCTATGCCGTTGAGTTTATGGCGGTGCTTCCTGGACTATGGCGCCCCATGTTaGTATTGGCCGTTGATGTCA +
Preference number: 4 (lower is better)
Translates to: VTELALSMPLSLWRCFLDYGAPC*YWPLMS
Trigger: TGACATCAACGGCCAATACCAACATGGGGCGCCATA...GTCCAGGAAGCACCGCCATAAACTCAACGGCATAGAAAGGGCCAACTCAGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414527.6
CDS-3UTR CCA 90 bp CCTTGTCCCCTTGGGGCTGGTAGCCAACCATGGTCGTACCTGACTCCATCATCATCCCGTTGTTGTGTCTaGCTAATTCCCTGGAAAGAA +
Preference number: 4 (lower is better)
Translates to: PCPLGAGSQPWSYLTPSSSRCCV*LIPWKE
Trigger: TTCTTTCCAGGGAATTAGCCAGACACAACAACGGGA...TGATGATGGAGTCAGGTACGACCATGGTTGGCTACCAGCCCCAAGGGGACAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493875.5
CDS-3UTR CCA 90 bp GGTCTTCGGAAATGTTGCCTTAGGTTTCAGCTAAGCGAGTCACAGAGATTGGTCCAAGACGCAAGGGTGTaGGGGACTAGGCTAGGAGCA +
Preference number: 4 (lower is better)
Translates to: GLRKCCLRFQLSESQRLVQDARV*GTRLGA
Trigger: TGCTCCTAGCCTAGTCCCCCACACCCTTGCGTCTTG...GACCAATCTCTGTGACTCGCTTAGCTGAAACCTAAGGCAACATTTCCGAAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493875.5
CDS-3UTR TCA 90 bp TGTGTGCAGTTACCATCACCTCTGGAGGTCACAATCATGCTTTGGTTCTGCTCTAGAAGCCGCAGATCTTaGGCCCCAGTTTTCTGGTGC +
Preference number: 4 (lower is better)
Translates to: CVQLPSPLEVTIMLWFCSRSRRS*APVFWC
Trigger: GCACCAGAAAACTGGGGCTCAAGATCTGCGGCTTCT...AGAGCAGAACCAAAGCATGATTGTGACCTCCAGAGGTGATGGTAACTGCACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344257.9
ENST00000375272.5
CDS-3UTR TCA 90 bp GAACACCAGACGTACAGCCAGACAGAGAGCGTAAGAGAAGAGCAGATGCTATTTAGAAGCCGCAGATCTTaGGCCCCAGTTTTCTGGTGC +
Preference number: 4 (lower is better)
Translates to: EHQTYSQTESVREEQMLFRSRRS*APVFWC
Trigger: GCACCAGAAAACTGGGGCTCAAGATCTGCGGCTTCT...AAATAGCATCTGCTCTTCTCTTACGCTCTCTGTCTGGCTGTACGTCTGGTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp GAACACCAGACGTACAGCCAGACAGAGAGCGTAAGAGAAGAGCAGATGCTATTTAGGATTGCCTCTCCTTaGAGGCACTCACAAGGCGAC +
Preference number: 4 (lower is better)
Translates to: EHQTYSQTESVREEQMLFRIASP*RHSQGD
Trigger: GTCGCCTTGTGAGTGCCTTCAAGGAGAGGCAATCCT...AAATAGCATCTGCTCTTCTCTTACGCTCTCTGTCTGGCTGTACGTCTGGTGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp CTGCTTGTCTGGCTGGAAGAGGTATCCTGCACACATCTGGTTGCATCCTTGGAGTCTTGCGGACATAGTTaGGGAGTATGTCCACCACTT +
Preference number: 4 (lower is better)
Translates to: LLVWLEEVSCTHLVASLESCGHS*GVCPPL
Trigger: AAGTGGTGGACATACTCCTCAACTATGTCCGCAAGA...CTCCAAGGATGCAACCAGATGTGTGCAGGATACCTCTTCCAGCCAGACAAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp GGTCTTCGGAAATGTTGCCTTAGGTTTCAGCTAAGCGAGTCACAGAGATTGGTCCAGAGAGCTCCAAGTTaGAGCCCTCCATGCCTTCCA +
Preference number: 4 (lower is better)
Translates to: GLRKCCLRFQLSESQRLVQRAPS*SPPCLP
Trigger: TGGAAGGCATGGAGGGCTTCAACTTGGAGCTCTCTG...GACCAATCTCTGTGACTCGCTTAGCTGAAACCTAAGGCAACATTTCCGAAGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp TGTCCATTTTCCTTGGGAGGCCCCTGGAAATTTAGGAGGAAGACCCTTGGAAACGTTGGTATTGGCCGTTaGTGTCAGCCATTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: CPFSLGGPWKFRRKTLGNVGIGR*CQPFSS
Trigger: GCTGGAGAATGGCTGACATCAACGGCCAATACCAAC...GTTTCCAAGGGTCTTCCTCCTAAATTTCCAGGGGCCTCCCAAGGAAAATGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344257.9
ENST00000375272.5
CDS-3UTR TCA 90 bp GTGACTGAGTTGGCCCTTTCTATGCCGTTGAGTTTATGGCGGTGCTTCCTGGACTGTAGCGAGCAGCCATaGTGCTGTACATGTTGGATA +
Preference number: 4 (lower is better)
Translates to: VTELALSMPLSLWRCFLDCSEQP*CCTCWI
Trigger: TATCCAACATGTACAGCATCATGGCTGCTCGCTACA...GTCCAGGAAGCACCGCCATAAACTCAACGGCATAGAAAGGGCCAACTCAGTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414527.6
CDS-3UTR TCA 90 bp GGAGACATCATACTGCTTGTCTGGCTGGAAGAGGTATCCTGCACACATCTGGTTCCCTTTCTATGCCGTTaGGTTTATGGCGGTGCTTCC +
Preference number: 4 (lower is better)
Translates to: GDIILLVWLEEVSCTHLVPFLCR*VYGGAS
Trigger: GGAAGCACCGCCATAAACTCAACGGCATAGAAAGGG...AACCAGATGTGTGCAGGATACCTCTTCCAGCCAGACAAGCAGTATGATGTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp CCTGAGGCTTTGTGGAATATACCAAAAACAGACGTTTGTGTGCTCAGGCTCGCCTGTGAGGGTTCCAGGTaGCTGAGTTGGCCCTTTCTA +
Preference number: 4 (lower is better)
Translates to: PEALWNIPKTDVCVLRLACEGSR*LSWPFL
Trigger: TAGAAAGGGCCAACTCAGTCACCTGGAACCCTCACA...GGCGAGCCTGAGCACACAAACGTCTGTTTTTGGTATATTCCACAAAGCCTCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp AAAGCATTGAGAACACCAGACGTACAGCCAGACAGAGAGCGTAAGAGAAGAGCAACGCCCATCATCTTGTaGGGGTTCCAGGTGACTGAG +
Preference number: 4 (lower is better)
Translates to: KALRTPDVQPDRERKRRATPIIL*GFQVTE
Trigger: CTCAGTCACCTGGAACCCTCACAAGATGATGGGCGT...TGCTCTTCTCTTACGCTCTCTGTCTGGCTGTACGTCTGGTGTTCTCAATGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp CTGCTTGTCTGGCTGGAAGAGGTATCCTGCACACATCTGGTTGCATCCTTGGAGGTATACCCTTTTCCTTaGCGAGAATGGCAGAGCACT +
Preference number: 4 (lower is better)
Translates to: LLVWLEEVSCTHLVASLEVYPFP*REWQST
Trigger: AGTGCTCTGCCATTCTCGTCAAGGAAAAGGGTATAC...CTCCAAGGATGCAACCAGATGTGTGCAGGATACCTCTTCCAGCCAGACAAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp CCTGAGGCTTTGTGGAATATACCAAAAACAGACGTTTGTGTGCTCAGGCTCGCCTGTCTGGCACACCCCTaGGGCTTTGTGGAATATACC +
Preference number: 4 (lower is better)
Translates to: PEALWNIPKTDVCVLRLACLAHP*GFVEYT
Trigger: GGTATATTCCACAAAGCCTCAGGGGTGTGCCAGACA...GGCGAGCCTGAGCACACAAACGTCTGTTTTTGGTATATTCCACAAAGCCTCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp CCCCTGAGGCTTTGTGGAATATACCAAAAACAGACGTTTGTGTGCTCAGGCTCGTGTCTGGCACACCCCTaGGGCTTTGTGGAATATACC +
Preference number: 4 (lower is better)
Translates to: PLRLCGIYQKQTFVCSGSCLAHP*GFVEYT
Trigger: GGTATATTCCACAAAGCCTCAGGGGTGTGCCAGACA...CGAGCCTGAGCACACAAACGTCTGTTTTTGGTATATTCCACAAAGCCTCAGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp CATACTGCTTGTCTGGCTGGAAGAGGTATCCTGCACACATCTGGTTGCATCCTTTGTCTGGCACACCCCTaGGGCTTTGTGGAATATACC +
Preference number: 4 (lower is better)
Translates to: HTACLAGRGILHTSGCILCLAHP*GFVEYT
Trigger: GGTATATTCCACAAAGCCTCAGGGGTGTGCCAGACA...AAGGATGCAACCAGATGTGTGCAGGATACCTCTTCCAGCCAGACAAGCAGTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp GCTTTGTGGAATATACCAAAAACAGACGTTTGTGTGCTCAGGCTCGCCATTGAAAGCTTTTCCCGTCGTTaGGGGCTGTCTGGCACACCC +
Preference number: 4 (lower is better)
Translates to: ALWNIPKTDVCVLRLAIESFSRR*GLSGTP
Trigger: GGGTGTGCCAGACAGCCCTCAACGACGGGAAAAGCT...TTCAATGGCGAGCCTGAGCACACAAACGTCTGTTTTTGGTATATTCCACAAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp GGTCGATTCTCACCAACAGCATTTCCCTCGGCCCCTAGGACATGGCGTTTTGAACCATCATCAGGGCTTTaGTTTTTGGAGCCACCTTGT +
Preference number: 4 (lower is better)
Translates to: GRFSPTAFPSAPRTWRFEPSSGL*FLEPPC
Trigger: ACAAGGTGGCTCCAAAAATCAAAGCCCTGATGATGG...TTCAAAACGCCATGTCCTAGGGGCCGAGGGAAATGCTGTTGGTGAGAATCGACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp CCTTGTCCCCTTGGGGCTGGTAGCCAACCATGGTCGTACCTGACTCCATCATCACTTCAAAAACAGTTGTaGGCCTGGTCACTTTATCTG +
Preference number: 4 (lower is better)
Translates to: PCPLGAGSQPWSYLTPSSLQKQL*AWSLYL
Trigger: CAGATAAAGTGACCAGGCTCACAACTGTTTTTGAAG...TGATGATGGAGTCAGGTACGACCATGGTTGGCTACCAGCCCCAAGGGGACAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000493875.5
ENST00000625689.2
CDS-3UTR GCA 90 bp CGGAAATGTTGCCTTAGGTTTCAGCTAAGCGAGTCACAGAGATTGGTCATCAACGGCGTCACCTCCAGCTaGTTCCTCGTTCTCGCTAGT +
Preference number: 4 (lower is better)
Translates to: RKCCLRFQLSESQRLVINGVTSS*FLVLAS
Trigger: ACTAGCGAGAACGAGGAAGCAGCTGGAGGTGACGCC...GTTGATGACCAATCTCTGTGACTCGCTTAGCTGAAACCTAAGGCAACATTTCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358196.8
ENST00000625689.2
CDS-3UTR GCA 90 bp ATTGACTGCCTTCATCCAGTTTCCAAAATGATGGAGACCTGGCCAGCAGGGAGGAGGTTCTTGGAGGATTaGCTCTCCTTGAAGGCACTC +
Preference number: 4 (lower is better)
Translates to: IDCLHPVSKMMETWPAGRRFLED*LSLKAL
Trigger: GAGTGCCTTCAAGGAGAGGCAATCCTCCAAGAACCT...CCTCCCTGCTGGCCAGGTCTCCATCATTTTGGAAACTGGATGAAGGCAGTCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486850.1
CDS-3UTR GCA 90 bp ATCTGCAATCTCTTGTATCGGATCAAAAGCTCCATAAACAGTCGTGCCAGCAGTAGAAGTCAGTCTCTGTaGGCCGGAAGCGGGCATCCC +
Preference number: 4 (lower is better)
Translates to: ICNLLYRIKSSINSRASSRSQSL*AGSGHP
Trigger: GGGATGCCCGCTTCCGGCGCACAGAGACTGACTTCT...ACTGCTGGCACGACTGTTTATGGAGCTTTTGATCCGATACAAGAGATTGCAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414527.6
CDS-3UTR GCA 90 bp TTTCCTTGGGAGGCCCCTGGAAATTTAGGAGGAAGACCCTTGGAAACCATGTGTACTTCCAGGAGGAATTaGACGGTTTGCTCCTCACCG +
Preference number: 4 (lower is better)
Translates to: FPWEAPGNLGGRPLETMCTSRRN*TVCSSP
Trigger: CGGTGAGGAGCAAACCGTGCAATTCCTCCTGGAAGT...ACACATGGTTTCCAAGGGTCTTCCTCCTAAATTTCCAGGGGCCTCCCAAGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344257.9
ENST00000375272.5
CDS-3UTR GCA 90 bp CCCCTGAGGCTTTGTGGAATATACCAAAAACAGACGTTTGTGTGCTCAGGCTCGACTTCCAGGAGGAATTaGACGGTTTGCTCCTCACCG +
Preference number: 4 (lower is better)
Translates to: PLRLCGIYQKQTFVCSGSTSRRN*TVCSSP
Trigger: CGGTGAGGAGCAAACCGTGCAATTCCTCCTGGAAGT...CGAGCCTGAGCACACAAACGTCTGTTTTTGGTATATTCCACAAAGCCTCAGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR GCA 90 bp CTGCTTGTCTGGCTGGAAGAGGTATCCTGCACACATCTGGTTGCATCCTTGGAGACTTCAAGGTGTCTCTaGAGTCAACCAGGATCTGCT +
Preference number: 4 (lower is better)
Translates to: LLVWLEEVSCTHLVASLETSRCL*SQPGSA
Trigger: AGCAGATCCTGGTTGACTGCAGAGACACCTTGAAGT...CTCCAAGGATGCAACCAGATGTGTGCAGGATACCTCTTCCAGCCAGACAAGCAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR GCA 90 bp AGTTACCATCACCTCTGGAGGTCACAATCATGCTTTGGTTCTGCTCTGAGCCCCATCATGCTTTGGTTCTaGTCTGAGCCCCATCACCGT +
Preference number: 4 (lower is better)
Translates to: SYHHLWRSQSCFGSALSPIMLWF*SEPHHR
Trigger: ACGGTGATGGGGCTCAGAGCAGAACCAAAGCATGAT...GGGGCTCAGAGCAGAACCAAAGCATGATTGTGACCTCCAGAGGTGATGGTAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344257.9
ENST00000375272.5
CDS-3UTR GCA 90 bp TCATACTGCTTGTCTGGCTGGAAGAGGTATCCTGCACACATCTGGTTGCATCCTAGAATGGCAGAGCACTaGAACAGCACGCCCATCATC +
Preference number: 4 (lower is better)
Translates to: SYCLSGWKRYPAHIWLHPRMAEH*NSTPII
Trigger: GATGATGGGCGTGCTGTTGCAGTGCTCTGCCATTCT...AGGATGCAACCAGATGTGTGCAGGATACCTCTTCCAGCCAGACAAGCAGTATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR GCA 90 bp GTGACTGAGTTGGCCCTTTCTATGCCGTTGAGTTTATGGCGGTGCTTCCTGGACCTGCACACATCTGGTTaGATCCTTGGAGTATACCCT +
Preference number: 4 (lower is better)
Translates to: VTELALSMPLSLWRCFLDLHTSG*ILGVYP
Trigger: AGGGTATACTCCAAGGATGCAACCAGATGTGTGCAG...GTCCAGGAAGCACCGCCATAAACTCAACGGCATAGAAAGGGCCAACTCAGTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414527.6
CDS-3UTR GCA 90 bp CCCCTGAGGCTTTGTGGAATATACCAAAAACAGACGTTTGTGTGCTCAGGCTCGAGCGAGTCGGAATGTTaGTTGCCTCCCTCTTATCCC +
Preference number: 4 (lower is better)
Translates to: PLRLCGIYQKQTFVCSGSSESEC*LPPSYP
Trigger: GGGATAAGAGGGAGGCAAGCAACATTCCGACTCGCT...CGAGCCTGAGCACACAAACGTCTGTTTTTGGTATATTCCACAAAGCCTCAGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493875.5
CDS-3UTR CCA 90 bp AAACCATGTGTGCAGTTACCATCACCTCTGGAGGTCACAATCATGCTTTGGTTCGGTTGCGGACGAAGATaGGGTCGAAGACGCCATCAG +
Preference number: 4 (lower is better)
Translates to: KPCVQLPSPLEVTIMLWFGCGRR*GRRRHQ
Trigger: CTGATGGCGTCTTCGACCCCATCTTCGTCCGCAACC...GAACCAAAGCATGATTGTGACCTCCAGAGGTGATGGTAACTGCACACATGGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344257.9
ENST00000375272.5
CDS-3UTR CCA 90 bp AAACCATGTGTGCAGTTACCATCACCTCTGGAGGTCACAATCATGCTTTGGTTCTTTCTGGTGCATCCATaGGCCACGCCGCACCAGGTA +
Preference number: 4 (lower is better)
Translates to: KPCVQLPSPLEVTIMLWFFLVHP*ATPHQV
Trigger: TACCTGGTGCGGCGTGGCCCATGGATGCACCAGAAA...GAACCAAAGCATGATTGTGACCTCCAGAGGTGATGGTAACTGCACACATGGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344257.9
ENST00000375272.5
CDS-3UTR CCA 90 bp TTTCCTTGGGAGGCCCCTGGAAATTTAGGAGGAAGACCCTTGGAAACCATGTGTTCTCTTCCAGGCTGTTaGTCCTTTGCAAGAAGCCGC +
Preference number: 4 (lower is better)
Translates to: FPWEAPGNLGGRPLETMCSLPGC*SFARSR
Trigger: GCGGCTTCTTGCAAAGGACCAACAGCCTGGAAGAGA...ACACATGGTTTCCAAGGGTCTTCCTCCTAAATTTCCAGGGGCCTCCCAAGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344257.9
ENST00000375272.5
CDS-3UTR CCA 90 bp GGAGACATCATACTGCTTGTCTGGCTGGAAGAGGTATCCTGCACACATCTGGTTTCTCTTCCAGGCTGTTaGTCCTTTGCAAGAAGCCGC +
Preference number: 4 (lower is better)
Translates to: GDIILLVWLEEVSCTHLVSLPGC*SFARSR
Trigger: GCGGCTTCTTGCAAAGGACCAACAGCCTGGAAGAGA...AACCAGATGTGTGCAGGATACCTCTTCCAGCCAGACAAGCAGTATGATGTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CCA 90 bp CATACTGCTTGTCTGGCTGGAAGAGGTATCCTGCACACATCTGGTTGCATCCTTTCTCTTCCAGGCTGTTaGTCCTTTGCAAGAAGCCGC +
Preference number: 4 (lower is better)
Translates to: HTACLAGRGILHTSGCILSLPGC*SFARSR
Trigger: GCGGCTTCTTGCAAAGGACCAACAGCCTGGAAGAGA...AAGGATGCAACCAGATGTGTGCAGGATACCTCTTCCAGCCAGACAAGCAGTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CCA 90 bp CCATTTTCCTTGGGAGGCCCCTGGAAATTTAGGAGGAAGACCCTTGGAAACCATTCCTTGGGAGGCCCCTaGAAATTTAGGAGGAAGACC +
Preference number: 4 (lower is better)
Translates to: PFSLGGPWKFRRKTLGNHSLGGP*KFRRKT
Trigger: GGTCTTCCTCCTAAATTTCCAGGGGCCTCCCAAGGA...ATGGTTTCCAAGGGTCTTCCTCCTAAATTTCCAGGGGCCTCCCAAGGAAAATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344257.9
ENST00000375272.5
CDS-3UTR CCA 90 bp TTTTCCTTGGGAGGCCCCTGGAAATTTAGGAGGAAGACCCTTGGAAACCATGTGTCCTTGGGAGGCCCCTaGAAATTTAGGAGGAAGACC +
Preference number: 4 (lower is better)
Translates to: FSLGGPWKFRRKTLGNHVSLGGP*KFRRKT
Trigger: GGTCTTCCTCCTAAATTTCCAGGGGCCTCCCAAGGA...CACATGGTTTCCAAGGGTCTTCCTCCTAAATTTCCAGGGGCCTCCCAAGGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344257.9
ENST00000375272.5
CDS-3UTR CCA 90 bp CATACTGCTTGTCTGGCTGGAAGAGGTATCCTGCACACATCTGGTTGCATCCTTGCTGGTAGCCAACCATaGTCGTACCTGACTCCATCA +
Preference number: 4 (lower is better)
Translates to: HTACLAGRGILHTSGCILAGSQP*SYLTPS
Trigger: TGATGGAGTCAGGTACGACCATGGTTGGCTACCAGC...AAGGATGCAACCAGATGTGTGCAGGATACCTCTTCCAGCCAGACAAGCAGTATG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CCA 90 bp CGGAAATGTTGCCTTAGGTTTCAGCTAAGCGAGTCACAGAGATTGGTCATCAACCCATCCGGAAGAAGTTaGCCTTGTCCCCTTGGGGCT +
Preference number: 4 (lower is better)
Translates to: RKCCLRFQLSESQRLVINPSGRS*PCPLGA
Trigger: AGCCCCAAGGGGACAAGGCCAACTTCTTCCGGATGG...GTTGATGACCAATCTCTGTGACTCGCTTAGCTGAAACCTAAGGCAACATTTCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp AGAATATGTCCATTTTCCTTGGGAGGCCCCTGGAAATTTAGGAGGAAGACCCTTAGGATTGCCTCTCCTTaGAGGCACTCACAAGGCGAC +
Preference number: 4 (lower is better)
Translates to: RICPFSLGGPWKFRRKTLRIASP*RHSQGD
Trigger: GTCGCCTTGTGAGTGCCTTCAAGGAGAGGCAATCCT...AAGGGTCTTCCTCCTAAATTTCCAGGGGCCTCCCAAGGAAAATGGACATATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344257.9
ENST00000375272.5
CDS-3UTR TCA 90 bp CTCTTGTATCGGATCAAAAGCTCCATAAACAGTCGTGCCAGCAGTTGCATTGACCAGAGAGCTCCAAGTTaGAGCCCTCCATGCCTTCCA +
Preference number: 4 (lower is better)
Translates to: LLYRIKSSINSRASSCIDQRAPS*SPPCLP
Trigger: TGGAAGGCATGGAGGGCTTCAACTTGGAGCTCTCTG...GTCAATGCAACTGCTGGCACGACTGTTTATGGAGCTTTTGATCCGATACAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414527.6
CDS-3UTR TCA 90 bp TTTTCCTTGGGAGGCCCCTGGAAATTTAGGAGGAAGACCCTTGGAAACCATGTGCAGTGGAGAGCTGGTTaGAAAATCGAGGATGACCTG +
Preference number: 4 (lower is better)
Translates to: FSLGGPWKFRRKTLGNHVQWRAG*KIEDDL
Trigger: CAGGTCATCCTCGATTTTTCAACCAGCTCTCCACTG...CACATGGTTTCCAAGGGTCTTCCTCCTAAATTTCCAGGGGCCTCCCAAGGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344257.9
ENST00000375272.5
CDS-3UTR TCA 90 bp TCATCCATCATCACTTCAGGTGGAGAAACGCTGACAGTGAGGTCGATTCTCACCCAGTGGAGAGCTGGTTaGAAAATCGAGGATGACCTG +
Preference number: 4 (lower is better)
Translates to: SSIITSGGETLTVRSILTQWRAG*KIEDDL
Trigger: CAGGTCATCCTCGATTTTTCAACCAGCTCTCCACTG...GGTGAGAATCGACCTCACTGTCAGCGTTTCTCCACCTGAAGTGATGATGGATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp TCATACTGCTTGTCTGGCTGGAAGAGGTATCCTGCACACATCTGGTTGCATCCTCAGTGGAGAGCTGGTTaGAAAATCGAGGATGACCTG +
Preference number: 4 (lower is better)
Translates to: SYCLSGWKRYPAHIWLHPQWRAG*KIEDDL
Trigger: CAGGTCATCCTCGATTTTTCAACCAGCTCTCCACTG...AGGATGCAACCAGATGTGTGCAGGATACCTCTTCCAGCCAGACAAGCAGTATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp AAAGCATTGAGAACACCAGACGTACAGCCAGACAGAGAGCGTAAGAGAAGAGCAGTTGGTATTGGCCGTTaGTGTCAGCCATTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: KALRTPDVQPDRERKRRAVGIGR*CQPFSS
Trigger: GCTGGAGAATGGCTGACATCAACGGCCAATACCAAC...TGCTCTTCTCTTACGCTCTCTGTCTGGCTGTACGTCTGGTGTTCTCAATGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp GGTCTTCGGAAATGTTGCCTTAGGTTTCAGCTAAGCGAGTCACAGAGATTGGTCGTTGGTATTGGCCGTTaGTGTCAGCCATTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: GLRKCCLRFQLSESQRLVVGIGR*CQPFSS
Trigger: GCTGGAGAATGGCTGACATCAACGGCCAATACCAAC...GACCAATCTCTGTGACTCGCTTAGCTGAAACCTAAGGCAACATTTCCGAAGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp ACAATCATTGAAATCATGACACATAGTCTCCCCCTCCCACCACCAAGGTCAGACGTTGGTATTGGCCGTTaGTGTCAGCCATTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: TIIEIMTHSLPLPPPRSDVGIGR*CQPFSS
Trigger: GCTGGAGAATGGCTGACATCAACGGCCAATACCAAC...GTCTGACCTTGGTGGTGGGAGGGGGAGACTATGTGTCATGATTTCAATGATTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp CTTAGGTTTCAGCTAAGCGAGTCACAGAGATTGGTCATCAACTACTACAAAATTGGTGCTTCCTGGACATaGGCAGCCCACCTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: LRFQLSESQRLVINYYKIGASWT*AAHLPR
Trigger: CCTGGGGAGGTGGGCTGCTCATGTCCAGGAAGCACC...AATTTTGTAGTAGTTGATGACCAATCTCTGTGACTCGCTTAGCTGAAACCTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp CGGAAATGTTGCCTTAGGTTTCAGCTAAGCGAGTCACAGAGATTGGTCATCAACAGGGTTCCAGGTGACTaGGTTGGCCCTTTCTATGCC +
Preference number: 4 (lower is better)
Translates to: RKCCLRFQLSESQRLVINRVPGD*VGPFYA
Trigger: GGCATAGAAAGGGCCAACTCAGTCACCTGGAACCCT...GTTGATGACCAATCTCTGTGACTCGCTTAGCTGAAACCTAAGGCAACATTTCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp CGGAAATGTTGCCTTAGGTTTCAGCTAAGCGAGTCACAGAGATTGGTCATCAACACGCCCATCATCTTGTaGGGGTTCCAGGTGACTGAG +
Preference number: 4 (lower is better)
Translates to: RKCCLRFQLSESQRLVINTPIIL*GFQVTE
Trigger: CTCAGTCACCTGGAACCCTCACAAGATGATGGGCGT...GTTGATGACCAATCTCTGTGACTCGCTTAGCTGAAACCTAAGGCAACATTTCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp GAACACCAGACGTACAGCCAGACAGAGAGCGTAAGAGAAGAGCAGATGCTATTTACATCAGCCAGAACTTaGAGATATCCACGTGGCGGC +
Preference number: 4 (lower is better)
Translates to: EHQTYSQTESVREEQMLFTSART*RYPRGG
Trigger: GCCGCCACGTGGATATCTTCAAGTTCTGGCTGATGT...AAATAGCATCTGCTCTTCTCTTACGCTCTCTGTCTGGCTGTACGTCTGGTGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp GAACACCAGACGTACAGCCAGACAGAGAGCGTAAGAGAAGAGCAGATGCTATTTTGTCTGGCACACCCCTaGGGCTTTGTGGAATATACC +
Preference number: 4 (lower is better)
Translates to: EHQTYSQTESVREEQMLFCLAHP*GFVEYT
Trigger: GGTATATTCCACAAAGCCTCAGGGGTGTGCCAGACA...AAATAGCATCTGCTCTTCTCTTACGCTCTCTGTCTGGCTGTACGTCTGGTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp ATAAACTCATGTTCTGCGAAGGATGATTACAGATCCTGGCCCAGTCTTTCTATCAGCTTTTCCCGTCGTTaGGGGCTGTCTGGCACACCC +
Preference number: 4 (lower is better)
Translates to: INSCSAKDDYRSWPSLSISFSRR*GLSGTP
Trigger: GGGTGTGCCAGACAGCCCTCAACGACGGGAAAAGCT...GATAGAAAGACTGGGCCAGGATCTGTAATCATCCTTCGCAGAACATGAGTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp GCTTTGTGGAATATACCAAAAACAGACGTTTGTGTGCTCAGGCTCGCCATTGAACGGCTGGGTTGGAGATaGCCATCCGGAAGAAGTTGG +
Preference number: 4 (lower is better)
Translates to: ALWNIPKTDVCVLRLAIERLGWR*PSGRSW
Trigger: CCAACTTCTTCCGGATGGTCATCTCCAACCCAGCCG...TTCAATGGCGAGCCTGAGCACACAAACGTCTGTTTTTGGTATATTCCACAAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp CATACTGCTTGTCTGGCTGGAAGAGGTATCCTGCACACATCTGGTTGCATCCTTGCGGGAAACATGCCGTaGTCTATTACTAAGCCACAC +
Preference number: 4 (lower is better)
Translates to: HTACLAGRGILHTSGCILAGNMP*SITKPH
Trigger: GTGTGGCTTAGTAATAGATCACGGCATGTTTCCCGC...AAGGATGCAACCAGATGTGTGCAGGATACCTCTTCCAGCCAGACAAGCAGTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp GGTCGATTCTCACCAACAGCATTTCCCTCGGCCCCTAGGACATGGCGTTTTGAACAATCATTGAAATCATaGCACATAGTCTCCCCCTCC +
Preference number: 4 (lower is better)
Translates to: GRFSPTAFPSAPRTWRFEQSLKS*HIVSPS
Trigger: GGAGGGGGAGACTATGTGTCATGATTTCAATGATTG...TTCAAAACGCCATGTCCTAGGGGCCGAGGGAAATGCTGTTGGTGAGAATCGACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR GCA 90 bp CCATGTGTGCAGTTACCATCACCTCTGGAGGTCACAATCATGCTTTGGTTCTGCAGGCTGTTGGTCCTTTaGAAGAAGCCGCAGATCTTG +
Preference number: 4 (lower is better)
Translates to: PCVQLPSPLEVTIMLWFCRLLVL*KKPQIL
Trigger: CAAGATCTGCGGCTTCTTGCAAAGGACCAACAGCCT...GCAGAACCAAAGCATGATTGTGACCTCCAGAGGTGATGGTAACTGCACACATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344257.9
ENST00000375272.5
CDS-3UTR GCA 90 bp TTTCCTTGGGAGGCCCCTGGAAATTTAGGAGGAAGACCCTTGGAAACCATGTGTAGGCTGTTGGTCCTTTaGAAGAAGCCGCAGATCTTG +
Preference number: 4 (lower is better)
Translates to: FPWEAPGNLGGRPLETMCRLLVL*KKPQIL
Trigger: CAAGATCTGCGGCTTCTTGCAAAGGACCAACAGCCT...ACACATGGTTTCCAAGGGTCTTCCTCCTAAATTTCCAGGGGCCTCCCAAGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344257.9
ENST00000375272.5
CDS-3UTR GCA 90 bp CATACTGCTTGTCTGGCTGGAAGAGGTATCCTGCACACATCTGGTTGCATCCTTAGGTTCTTGGAGGATTaGCTCTCCTTGAAGGCACTC +
Preference number: 4 (lower is better)
Translates to: HTACLAGRGILHTSGCILRFLED*LSLKAL
Trigger: GAGTGCCTTCAAGGAGAGGCAATCCTCCAAGAACCT...AAGGATGCAACCAGATGTGTGCAGGATACCTCTTCCAGCCAGACAAGCAGTATG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR GCA 90 bp ATAAACTCATGTTCTGCGAAGGATGATTACAGATCCTGGCCCAGTCTTTCTATCAGAAGTCAGTCTCTGTaGGCCGGAAGCGGGCATCCC +
Preference number: 4 (lower is better)
Translates to: INSCSAKDDYRSWPSLSIRSQSL*AGSGHP
Trigger: GGGATGCCCGCTTCCGGCGCACAGAGACTGACTTCT...GATAGAAAGACTGGGCCAGGATCTGTAATCATCCTTCGCAGAACATGAGTTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR GCA 90 bp GGTCTTCGGAAATGTTGCCTTAGGTTTCAGCTAAGCGAGTCACAGAGATTGGTCACTTCCAGGAGGAATTaGACGGTTTGCTCCTCACCG +
Preference number: 4 (lower is better)
Translates to: GLRKCCLRFQLSESQRLVTSRRN*TVCSSP
Trigger: CGGTGAGGAGCAAACCGTGCAATTCCTCCTGGAAGT...GACCAATCTCTGTGACTCGCTTAGCTGAAACCTAAGGCAACATTTCCGAAGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR GCA 90 bp GGCATTCCCATAAACTCATGTTCTGCGAAGGATGATTACAGATCCTGGCCCAGTACTTCCAGGAGGAATTaGACGGTTTGCTCCTCACCG +
Preference number: 4 (lower is better)
Translates to: GIPINSCSAKDDYRSWPSTSRRN*TVCSSP
Trigger: CGGTGAGGAGCAAACCGTGCAATTCCTCCTGGAAGT...ACTGGGCCAGGATCTGTAATCATCCTTCGCAGAACATGAGTTTATGGGAATGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493875.5
ENST00000625689.2
CDS-3UTR GCA 90 bp TCATCCATCATCACTTCAGGTGGAGAAACGCTGACAGTGAGGTCGATTCTCACCATCGAGGATGACCTGTaGGAACCCCATACTTCAAGG +
Preference number: 4 (lower is better)
Translates to: SSIITSGGETLTVRSILTIEDDL*EPHTSR
Trigger: CCTTGAAGTATGGGGTTCGCACAGGTCATCCTCGAT...GGTGAGAATCGACCTCACTGTCAGCGTTTCTCCACCTGAAGTGATGATGGATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR GCA 90 bp TTTCCTTGGGAGGCCCCTGGAAATTTAGGAGGAAGACCCTTGGAAACCATGTGTATCATGCTTTGGTTCTaGTCTGAGCCCCATCACCGT +
Preference number: 4 (lower is better)
Translates to: FPWEAPGNLGGRPLETMCIMLWF*SEPHHR
Trigger: ACGGTGATGGGGCTCAGAGCAGAACCAAAGCATGAT...ACACATGGTTTCCAAGGGTCTTCCTCCTAAATTTCCAGGGGCCTCCCAAGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344257.9
ENST00000375272.5
CDS-3UTR GCA 90 bp GTCCATTTTCCTTGGGAGGCCCCTGGAAATTTAGGAGGAAGACCCTTGGAAACCTGGAGGTCACAATCATaGTTTGGTTCTGCTCTGAGC +
Preference number: 4 (lower is better)
Translates to: VHFPWEAPGNLGGRPLETWRSQS*FGSALS
Trigger: GCTCAGAGCAGAACCAAAGCATGATTGTGACCTCCA...GGTTTCCAAGGGTCTTCCTCCTAAATTTCCAGGGGCCTCCCAAGGAAAATGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344257.9
ENST00000375272.5
CDS-3UTR GCA 90 bp GTCCATTTTCCTTGGGAGGCCCCTGGAAATTTAGGAGGAAGACCCTTGGAAACCCTTGGAAACCATGTGTaGAGTTACCATCACCTCTGG +
Preference number: 4 (lower is better)
Translates to: VHFPWEAPGNLGGRPLETLGNHV*SYHHLW
Trigger: CCAGAGGTGATGGTAACTGCACACATGGTTTCCAAG...GGTTTCCAAGGGTCTTCCTCCTAAATTTCCAGGGGCCTCCCAAGGAAAATGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344257.9
ENST00000375272.5
CDS-3UTR GCA 90 bp CCCCTGAGGCTTTGTGGAATATACCAAAAACAGACGTTTGTGTGCTCAGGCTCGTTGAGTTTATGGCGGTaGTTCCTGGACATGAGCAGC +
Preference number: 4 (lower is better)
Translates to: PLRLCGIYQKQTFVCSGSLSLWR*FLDMSS
Trigger: GCTGCTCATGTCCAGGAAGCACCGCCATAAACTCAA...CGAGCCTGAGCACACAAACGTCTGTTTTTGGTATATTCCACAAAGCCTCAGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR GCA 90 bp CTGAGGCTTTGTGGAATATACCAAAAACAGACGTTTGTGTGCTCAGGCTCGCCAAGAATGGCAGAGCACTaGAACAGCACGCCCATCATC +
Preference number: 4 (lower is better)
Translates to: LRLCGIYQKQTFVCSGSPRMAEH*NSTPII
Trigger: GATGATGGGCGTGCTGTTGCAGTGCTCTGCCATTCT...TGGCGAGCCTGAGCACACAAACGTCTGTTTTTGGTATATTCCACAAAGCCTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR GCA 90 bp CCTGAGGCTTTGTGGAATATACCAAAAACAGACGTTTGTGTGCTCAGGCTCGCCCTGGAAGAGGTATCCTaGACACATCTGGTTGCATCC +
Preference number: 4 (lower is better)
Translates to: PEALWNIPKTDVCVLRLALEEVS*THLVAS
Trigger: GGATGCAACCAGATGTGTGCAGGATACCTCTTCCAG...GGCGAGCCTGAGCACACAAACGTCTGTTTTTGGTATATTCCACAAAGCCTCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CCA 90 bp GTGTGCAGTTACCATCACCTCTGGAGGTCACAATCATGCTTTGGTTCTGCTCTGAGTCCAGCACCTTGGTaGAGCGATCAAATGTCTTGC +
Preference number: 4 (lower is better)
Translates to: VCSYHHLWRSQSCFGSALSPAPW*SDQMSC
Trigger: GCAAGACATTTGATCGCTCCACCAAGGTGCTGGACT...CAGAGCAGAACCAAAGCATGATTGTGACCTCCAGAGGTGATGGTAACTGCACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344257.9
ENST00000375272.5
CDS-3UTR CCA 90 bp CCTGAGGCTTTGTGGAATATACCAAAAACAGACGTTTGTGTGCTCAGGCTCGCCAGTCCAGCACCTTGGTaGAGCGATCAAATGTCTTGC +
Preference number: 4 (lower is better)
Translates to: PEALWNIPKTDVCVLRLASPAPW*SDQMSC
Trigger: GCAAGACATTTGATCGCTCCACCAAGGTGCTGGACT...GGCGAGCCTGAGCACACAAACGTCTGTTTTTGGTATATTCCACAAAGCCTCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CCA 90 bp GGAGACATCATACTGCTTGTCTGGCTGGAAGAGGTATCCTGCACACATCTGGTTTACTGCTTGTCTGGCTaGAAGAGGTATCCTGCACAC +
Preference number: 4 (lower is better)
Translates to: GDIILLVWLEEVSCTHLVYCLSG*KRYPAH
Trigger: GTGTGCAGGATACCTCTTCCAGCCAGACAAGCAGTA...AACCAGATGTGTGCAGGATACCTCTTCCAGCCAGACAAGCAGTATGATGTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CCA 90 bp ATCTGCAATCTCTTGTATCGGATCAAAAGCTCCATAAACAGTCGTGCCAGCAGTTCGTTGAGGGCTGTCTaGCACACCCCTGAGGCTTTG +
Preference number: 4 (lower is better)
Translates to: ICNLLYRIKSSINSRASSSLRAV*HTPEAL
Trigger: CAAAGCCTCAGGGGTGTGCCAGACAGCCCTCAACGA...ACTGCTGGCACGACTGTTTATGGAGCTTTTGATCCGATACAAGAGATTGCAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414527.6
CDS-3UTR CCA 90 bp AAAGCATTGAGAACACCAGACGTACAGCCAGACAGAGAGCGTAAGAGAAGAGCAGCTGGTAGCCAACCATaGTCGTACCTGACTCCATCA +
Preference number: 4 (lower is better)
Translates to: KALRTPDVQPDRERKRRAAGSQP*SYLTPS
Trigger: TGATGGAGTCAGGTACGACCATGGTTGGCTACCAGC...TGCTCTTCTCTTACGCTCTCTGTCTGGCTGTACGTCTGGTGTTCTCAATGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CCA 90 bp GGTCTTCGGAAATGTTGCCTTAGGTTTCAGCTAAGCGAGTCACAGAGATTGGTCAAGTCAATGTCAGACTaGGTAGCGGCTGGGTTGGAG +
Preference number: 4 (lower is better)
Translates to: GLRKCCLRFQLSESQRLVKSMSD*VAAGLE
Trigger: CTCCAACCCAGCCGCTACCCAGTCTGACATTGACTT...GACCAATCTCTGTGACTCGCTTAGCTGAAACCTAAGGCAACATTTCCGAAGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CCA 90 bp GAACACCAGACGTACAGCCAGACAGAGAGCGTAAGAGAAGAGCAGATGCTATTTAAGTCAATGTCAGACTaGGTAGCGGCTGGGTTGGAG +
Preference number: 4 (lower is better)
Translates to: EHQTYSQTESVREEQMLFKSMSD*VAAGLE
Trigger: CTCCAACCCAGCCGCTACCCAGTCTGACATTGACTT...AAATAGCATCTGCTCTTCTCTTACGCTCTCTGTCTGGCTGTACGTCTGGTGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CCA 90 bp CTGCTTGTCTGGCTGGAAGAGGTATCCTGCACACATCTGGTTGCATCCTTGGAGAGTTGTTGGACAAGCTaGTTGGCAGCATGTTTAGCT +
Preference number: 4 (lower is better)
Translates to: LLVWLEEVSCTHLVASLESCWTS*LAACLA
Trigger: AGCTAAACATGCTGCCAACCAGCTTGTCCAACAACT...CTCCAAGGATGCAACCAGATGTGTGCAGGATACCTCTTCCAGCCAGACAAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493875.5
ENST00000625689.2
3UTR CAA 72 bp CCAACCATGGTCGTACCTGACTCCATCATCAGGGCTTaGATTTTTGGAGCCACCTTGTGTAGCTTTTCCCGT +
Preference number: 4 (lower is better)
Translates to: PTMVVPDSIIRA*IFGATLCSFSR
Trigger: ACGGGAAAAGCTACACAAGGTGGCTCCAAAAATCAAAGCCCTGATGATGGAGTCAGGTACGACCATGGTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp TGCACTTTATCAAAATCACATTGTCAGTTCCAAAGCCAAGTGCAGCCCCAGCTTAGAAGCCGCAGATCTTaGGCCCCAGTTTTCTGGTGC +
Preference number: 4 (lower is better)
Translates to: CTLSKSHCQFQSQVQPQLRSRRS*APVFWC
Trigger: GCACCAGAAAACTGGGGCTCAAGATCTGCGGCTTCT...AAGCTGGGGCTGCACTTGGCTTTGGAACTGACAATGTGATTTTGATAAAGTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000414527.6
CDS-3UTR TCA 90 bp GCTTTGTGGAATATACCAAAAACAGACGTTTGTGTGCTCAGGCTCGCCATTGAAAGGATTGCCTCTCCTTaGAGGCACTCACAAGGCGAC +
Preference number: 4 (lower is better)
Translates to: ALWNIPKTDVCVLRLAIERIASP*RHSQGD
Trigger: GTCGCCTTGTGAGTGCCTTCAAGGAGAGGCAATCCT...TTCAATGGCGAGCCTGAGCACACAAACGTCTGTTTTTGGTATATTCCACAAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp TTTTCCTTGGGAGGCCCCTGGAAATTTAGGAGGAAGACCCTTGGAAACCATGTGTCTTGCGGACATAGTTaGGGAGTATGTCCACCACTT +
Preference number: 4 (lower is better)
Translates to: FSLGGPWKFRRKTLGNHVSCGHS*GVCPPL
Trigger: AAGTGGTGGACATACTCCTCAACTATGTCCGCAAGA...CACATGGTTTCCAAGGGTCTTCCTCCTAAATTTCCAGGGGCCTCCCAAGGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344257.9
ENST00000375272.5
CDS-3UTR TCA 90 bp GTGTGCAGTTACCATCACCTCTGGAGGTCACAATCATGCTTTGGTTCTGCTCTGTCTTGCGGACATAGTTaGGGAGTATGTCCACCACTT +
Preference number: 4 (lower is better)
Translates to: VCSYHHLWRSQSCFGSALSCGHS*GVCPPL
Trigger: AAGTGGTGGACATACTCCTCAACTATGTCCGCAAGA...CAGAGCAGAACCAAAGCATGATTGTGACCTCCAGAGGTGATGGTAACTGCACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344257.9
ENST00000375272.5
CDS-3UTR TCA 90 bp TCATACTGCTTGTCTGGCTGGAAGAGGTATCCTGCACACATCTGGTTGCATCCTTCTTGCGGACATAGTTaGGGAGTATGTCCACCACTT +
Preference number: 4 (lower is better)
Translates to: SYCLSGWKRYPAHIWLHPSCGHS*GVCPPL
Trigger: AAGTGGTGGACATACTCCTCAACTATGTCCGCAAGA...AGGATGCAACCAGATGTGTGCAGGATACCTCTTCCAGCCAGACAAGCAGTATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp AAAGAATATGTCCATTTTCCTTGGGAGGCCCCTGGAAATTTAGGAGGAAGACCCGTTGGTATTGGCCGTTaGTGTCAGCCATTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: KEYVHFPWEAPGNLGGRPVGIGR*CQPFSS
Trigger: GCTGGAGAATGGCTGACATCAACGGCCAATACCAAC...GGGTCTTCCTCCTAAATTTCCAGGGGCCTCCCAAGGAAAATGGACATATTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344257.9
ENST00000375272.5
CDS-3UTR TCA 90 bp CGGAAATGTTGCCTTAGGTTTCAGCTAAGCGAGTCACAGAGATTGGTCATCAACCCCTTTCTATGCCGTTaGGTTTATGGCGGTGCTTCC +
Preference number: 4 (lower is better)
Translates to: RKCCLRFQLSESQRLVINPFLCR*VYGGAS
Trigger: GGAAGCACCGCCATAAACTCAACGGCATAGAAAGGG...GTTGATGACCAATCTCTGTGACTCGCTTAGCTGAAACCTAAGGCAACATTTCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp GAACACCAGACGTACAGCCAGACAGAGAGCGTAAGAGAAGAGCAGATGCTATTTGCGGGAAACATGCCGTaGTCTATTACTAAGCCACAC +
Preference number: 4 (lower is better)
Translates to: EHQTYSQTESVREEQMLFAGNMP*SITKPH
Trigger: GTGTGGCTTAGTAATAGATCACGGCATGTTTCCCGC...AAATAGCATCTGCTCTTCTCTTACGCTCTCTGTCTGGCTGTACGTCTGGTGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp TCATACTGCTTGTCTGGCTGGAAGAGGTATCCTGCACACATCTGGTTGCATCCTCTGCTGAAGGTAAAGTaGATTCTCTTGGAGCGGGAA +
Preference number: 4 (lower is better)
Translates to: SYCLSGWKRYPAHIWLHPLLKVK*ILLERE
Trigger: TTCCCGCTCCAAGAGAATTCACTTTACCTTCAGCAG...AGGATGCAACCAGATGTGTGCAGGATACCTCTTCCAGCCAGACAAGCAGTATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp GGTCTTCGGAAATGTTGCCTTAGGTTTCAGCTAAGCGAGTCACAGAGATTGGTCCTAATGGGGAGGGTGTaGCTTGTCATTTGGTGGTGT +
Preference number: 4 (lower is better)
Translates to: GLRKCCLRFQLSESQRLVLMGRV*LVIWWC
Trigger: ACACCACCAAATGACAAGTCACACCCTCCCCATTAG...GACCAATCTCTGTGACTCGCTTAGCTGAAACCTAAGGCAACATTTCCGAAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp CACGTGGCGGCCACACTGAATTGCCTTGTCCCCGGTGTCGTAGGAGACATCATACTAAAACGCACAGTGTaGATTTCCCTTCTTCAAAAA +
Preference number: 4 (lower is better)
Translates to: HVAATLNCLVPGVVGDIILKRTV*ISLLQK
Trigger: TTTTTGAAGAAGGGAAATTCACACTGTGCGTTTTAG...TATGATGTCTCCTACGACACCGGGGACAAGGCAATTCAGTGTGGCCGCCACGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000493875.5
ENST00000625689.2
CDS-3UTR GCA 90 bp CCCTTTCATTGCACTTTATCAAAATCACATTGTCAGTTCCAAAGCCAAGTGCAGCGCGTTCGAGGAGGTTaGGGACGAAGATGGGGTCGA +
Preference number: 4 (lower is better)
Translates to: PFHCTLSKSHCQFQSQVQRVRGG*GRRWGR
Trigger: TCGACCCCATCTTCGTCCGCAACCTCCTCGAACGCG...CTGCACTTGGCTTTGGAACTGACAATGTGATTTTGATAAAGTGCAATGAAAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414527.6
CDS-3UTR GCA 90 bp GGTCTTCGGAAATGTTGCCTTAGGTTTCAGCTAAGCGAGTCACAGAGATTGGTCAGGCTGTTGGTCCTTTaGAAGAAGCCGCAGATCTTG +
Preference number: 4 (lower is better)
Translates to: GLRKCCLRFQLSESQRLVRLLVL*KKPQIL
Trigger: CAAGATCTGCGGCTTCTTGCAAAGGACCAACAGCCT...GACCAATCTCTGTGACTCGCTTAGCTGAAACCTAAGGCAACATTTCCGAAGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR GCA 90 bp AACCATGTGTGCAGTTACCATCACCTCTGGAGGTCACAATCATGCTTTGGTTCTACTTCCAGGAGGAATTaGACGGTTTGCTCCTCACCG +
Preference number: 4 (lower is better)
Translates to: NHVCSYHHLWRSQSCFGSTSRRN*TVCSSP
Trigger: CGGTGAGGAGCAAACCGTGCAATTCCTCCTGGAAGT...AGAACCAAAGCATGATTGTGACCTCCAGAGGTGATGGTAACTGCACACATGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344257.9
ENST00000375272.5
CDS-3UTR GCA 90 bp CGGAAATGTTGCCTTAGGTTTCAGCTAAGCGAGTCACAGAGATTGGTCATCAACACTTCCAGGAGGAATTaGACGGTTTGCTCCTCACCG +
Preference number: 4 (lower is better)
Translates to: RKCCLRFQLSESQRLVINTSRRN*TVCSSP
Trigger: CGGTGAGGAGCAAACCGTGCAATTCCTCCTGGAAGT...GTTGATGACCAATCTCTGTGACTCGCTTAGCTGAAACCTAAGGCAACATTTCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR GCA 90 bp TTTTCCTTGGGAGGCCCCTGGAAATTTAGGAGGAAGACCCTTGGAAACCATGTGACTTCAAGGTGTCTCTaGAGTCAACCAGGATCTGCT +
Preference number: 4 (lower is better)
Translates to: FSLGGPWKFRRKTLGNHVTSRCL*SQPGSA
Trigger: AGCAGATCCTGGTTGACTGCAGAGACACCTTGAAGT...CACATGGTTTCCAAGGGTCTTCCTCCTAAATTTCCAGGGGCCTCCCAAGGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344257.9
ENST00000375272.5
CDS-3UTR GCA 90 bp TCATCCATCATCACTTCAGGTGGAGAAACGCTGACAGTGAGGTCGATTCTCACCACTTCAAGGTGTCTCTaGAGTCAACCAGGATCTGCT +
Preference number: 4 (lower is better)
Translates to: SSIITSGGETLTVRSILTTSRCL*SQPGSA
Trigger: AGCAGATCCTGGTTGACTGCAGAGACACCTTGAAGT...GGTGAGAATCGACCTCACTGTCAGCGTTTCTCCACCTGAAGTGATGATGGATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR GCA 90 bp GAACACCAGACGTACAGCCAGACAGAGAGCGTAAGAGAAGAGCAGATGCTATTTATCGAGGATGACCTGTaGGAACCCCATACTTCAAGG +
Preference number: 4 (lower is better)
Translates to: EHQTYSQTESVREEQMLFIEDDL*EPHTSR
Trigger: CCTTGAAGTATGGGGTTCGCACAGGTCATCCTCGAT...AAATAGCATCTGCTCTTCTCTTACGCTCTCTGTCTGGCTGTACGTCTGGTGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR GCA 90 bp ACAATCATTGAAATCATGACACATAGTCTCCCCCTCCCACCACCAAGGTCAGACATCGAGGATGACCTGTaGGAACCCCATACTTCAAGG +
Preference number: 4 (lower is better)
Translates to: TIIEIMTHSLPLPPPRSDIEDDL*EPHTSR
Trigger: CCTTGAAGTATGGGGTTCGCACAGGTCATCCTCGAT...GTCTGACCTTGGTGGTGGGAGGGGGAGACTATGTGTCATGATTTCAATGATTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR GCA 90 bp CCATGTGTGCAGTTACCATCACCTCTGGAGGTCACAATCATGCTTTGGTTCTGCTGGAGGTCACAATCATaGTTTGGTTCTGCTCTGAGC +
Preference number: 4 (lower is better)
Translates to: PCVQLPSPLEVTIMLWFCWRSQS*FGSALS
Trigger: GCTCAGAGCAGAACCAAAGCATGATTGTGACCTCCA...GCAGAACCAAAGCATGATTGTGACCTCCAGAGGTGATGGTAACTGCACACATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344257.9
ENST00000375272.5
CDS-3UTR GCA 90 bp TTTTCCTTGGGAGGCCCCTGGAAATTTAGGAGGAAGACCCTTGGAAACCATGTGCTTGGAAACCATGTGTaGAGTTACCATCACCTCTGG +
Preference number: 4 (lower is better)
Translates to: FSLGGPWKFRRKTLGNHVLGNHV*SYHHLW
Trigger: CCAGAGGTGATGGTAACTGCACACATGGTTTCCAAG...CACATGGTTTCCAAGGGTCTTCCTCCTAAATTTCCAGGGGCCTCCCAAGGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344257.9
ENST00000375272.5
CDS-3UTR GCA 90 bp AAAGCATTGAGAACACCAGACGTACAGCCAGACAGAGAGCGTAAGAGAAGAGCATTGAGTTTATGGCGGTaGTTCCTGGACATGAGCAGC +
Preference number: 4 (lower is better)
Translates to: KALRTPDVQPDRERKRRALSLWR*FLDMSS
Trigger: GCTGCTCATGTCCAGGAAGCACCGCCATAAACTCAA...TGCTCTTCTCTTACGCTCTCTGTCTGGCTGTACGTCTGGTGTTCTCAATGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR GCA 90 bp GGTCTTCGGAAATGTTGCCTTAGGTTTCAGCTAAGCGAGTCACAGAGATTGGTCTTGAGTTTATGGCGGTaGTTCCTGGACATGAGCAGC +
Preference number: 4 (lower is better)
Translates to: GLRKCCLRFQLSESQRLVLSLWR*FLDMSS
Trigger: GCTGCTCATGTCCAGGAAGCACCGCCATAAACTCAA...GACCAATCTCTGTGACTCGCTTAGCTGAAACCTAAGGCAACATTTCCGAAGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR GCA 90 bp CCTGAGGCTTTGTGGAATATACCAAAAACAGACGTTTGTGTGCTCAGGCTCGCCCTGCACACATCTGGTTaGATCCTTGGAGTATACCCT +
Preference number: 4 (lower is better)
Translates to: PEALWNIPKTDVCVLRLALHTSG*ILGVYP
Trigger: AGGGTATACTCCAAGGATGCAACCAGATGTGTGCAG...GGCGAGCCTGAGCACACAAACGTCTGTTTTTGGTATATTCCACAAAGCCTCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR GCA 90 bp GGTCTTCGGAAATGTTGCCTTAGGTTTCAGCTAAGCGAGTCACAGAGATTGGTCCTGGAAGAGGTATCCTaGACACATCTGGTTGCATCC +
Preference number: 4 (lower is better)
Translates to: GLRKCCLRFQLSESQRLVLEEVS*THLVAS
Trigger: GGATGCAACCAGATGTGTGCAGGATACCTCTTCCAG...GACCAATCTCTGTGACTCGCTTAGCTGAAACCTAAGGCAACATTTCCGAAGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR GCA 90 bp GAACACCAGACGTACAGCCAGACAGAGAGCGTAAGAGAAGAGCAGATGCTATTTTCCCACTGTGCCCTTTaGTTTCCACATCAGCCAGAA +
Preference number: 4 (lower is better)
Translates to: EHQTYSQTESVREEQMLFSHCAL*FPHQPE
Trigger: TTCTGGCTGATGTGGAAAGCAAAGGGCACAGTGGGA...AAATAGCATCTGCTCTTCTCTTACGCTCTCTGTCTGGCTGTACGTCTGGTGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CCA 90 bp AACCATGTGTGCAGTTACCATCACCTCTGGAGGTCACAATCATGCTTTGGTTCTTCTCTTCCAGGCTGTTaGTCCTTTGCAAGAAGCCGC +
Preference number: 4 (lower is better)
Translates to: NHVCSYHHLWRSQSCFGSSLPGC*SFARSR
Trigger: GCGGCTTCTTGCAAAGGACCAACAGCCTGGAAGAGA...AGAACCAAAGCATGATTGTGACCTCCAGAGGTGATGGTAACTGCACACATGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344257.9
ENST00000375272.5
CDS-3UTR CCA 90 bp TGTGTGCAGTTACCATCACCTCTGGAGGTCACAATCATGCTTTGGTTCTGCTCTAGTCCAGCACCTTGGTaGAGCGATCAAATGTCTTGC +
Preference number: 4 (lower is better)
Translates to: CVQLPSPLEVTIMLWFCSSPAPW*SDQMSC
Trigger: GCAAGACATTTGATCGCTCCACCAAGGTGCTGGACT...AGAGCAGAACCAAAGCATGATTGTGACCTCCAGAGGTGATGGTAACTGCACACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344257.9
ENST00000375272.5
CDS-3UTR CCA 90 bp CCATGTGTGCAGTTACCATCACCTCTGGAGGTCACAATCATGCTTTGGTTCTGCGAAAGTCCAGCACCTTaGTGGAGCGATCAAATGTCT +
Preference number: 4 (lower is better)
Translates to: PCVQLPSPLEVTIMLWFCESPAP*WSDQMS
Trigger: AGACATTTGATCGCTCCACCAAGGTGCTGGACTTTC...GCAGAACCAAAGCATGATTGTGACCTCCAGAGGTGATGGTAACTGCACACATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344257.9
ENST00000375272.5
CDS-3UTR CCA 90 bp CCCCTGAGGCTTTGTGGAATATACCAAAAACAGACGTTTGTGTGCTCAGGCTCGGAAAGTCCAGCACCTTaGTGGAGCGATCAAATGTCT +
Preference number: 4 (lower is better)
Translates to: PLRLCGIYQKQTFVCSGSESPAP*WSDQMS
Trigger: AGACATTTGATCGCTCCACCAAGGTGCTGGACTTTC...CGAGCCTGAGCACACAAACGTCTGTTTTTGGTATATTCCACAAAGCCTCAGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CCA 90 bp ACAATCATTGAAATCATGACACATAGTCTCCCCCTCCCACCACCAAGGTCAGACTTCCAGCAACTGGTGTaGGTGATGAAAGTCCAGCAC +
Preference number: 4 (lower is better)
Translates to: TIIEIMTHSLPLPPPRSDFQQLV*VMKVQH
Trigger: GTGCTGGACTTTCATCACCCACACCAGTTGCTGGAA...GTCTGACCTTGGTGGTGGGAGGGGGAGACTATGTGTCATGATTTCAATGATTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CCA 90 bp CTGCTTGTCTGGCTGGAAGAGGTATCCTGCACACATCTGGTTGCATCCTTGGAGTATCCTGCACACATCTaGTTGCATCCTTGGAGTATA +
Preference number: 4 (lower is better)
Translates to: LLVWLEEVSCTHLVASLEYPAHI*LHPWSI
Trigger: TATACTCCAAGGATGCAACCAGATGTGTGCAGGATA...CTCCAAGGATGCAACCAGATGTGTGCAGGATACCTCTTCCAGCCAGACAAGCAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CCA 90 bp ACAATCATTGAAATCATGACACATAGTCTCCCCCTCCCACCACCAAGGTCAGACTACTGCTTGTCTGGCTaGAAGAGGTATCCTGCACAC +
Preference number: 4 (lower is better)
Translates to: TIIEIMTHSLPLPPPRSDYCLSG*KRYPAH
Trigger: GTGTGCAGGATACCTCTTCCAGCCAGACAAGCAGTA...GTCTGACCTTGGTGGTGGGAGGGGGAGACTATGTGTCATGATTTCAATGATTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CCA 90 bp CGGAAATGTTGCCTTAGGTTTCAGCTAAGCGAGTCACAGAGATTGGTCATCAACGCTGGTAGCCAACCATaGTCGTACCTGACTCCATCA +
Preference number: 4 (lower is better)
Translates to: RKCCLRFQLSESQRLVINAGSQP*SYLTPS
Trigger: TGATGGAGTCAGGTACGACCATGGTTGGCTACCAGC...GTTGATGACCAATCTCTGTGACTCGCTTAGCTGAAACCTAAGGCAACATTTCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CCA 90 bp CCTGAGGCTTTGTGGAATATACCAAAAACAGACGTTTGTGTGCTCAGGCTCGCCTTTTCCTGGAGTTGTTaGACAAGCTGGTTGGCAGCA +
Preference number: 4 (lower is better)
Translates to: PEALWNIPKTDVCVLRLAFSWSC*TSWLAA
Trigger: TGCTGCCAACCAGCTTGTCCAACAACTCCAGGAAAA...GGCGAGCCTGAGCACACAAACGTCTGTTTTTGGTATATTCCACAAAGCCTCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CCA 90 bp TCATCCATCATCACTTCAGGTGGAGAAACGCTGACAGTGAGGTCGATTCTCACCCATCATCACTTCAGGTaGAGAAACGCTGACAGTGAG +
Preference number: 4 (lower is better)
Translates to: SSIITSGGETLTVRSILTHHHFR*RNADSE
Trigger: CTCACTGTCAGCGTTTCTCCACCTGAAGTGATGATG...GGTGAGAATCGACCTCACTGTCAGCGTTTCTCCACCTGAAGTGATGATGGATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp AACCATGTGTGCAGTTACCATCACCTCTGGAGGTCACAATCATGCTTTGGTTCTCAGTGGAGAGCTGGTTaGAAAATCGAGGATGACCTG +
Preference number: 4 (lower is better)
Translates to: NHVCSYHHLWRSQSCFGSQWRAG*KIEDDL
Trigger: CAGGTCATCCTCGATTTTTCAACCAGCTCTCCACTG...AGAACCAAAGCATGATTGTGACCTCCAGAGGTGATGGTAACTGCACACATGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344257.9
ENST00000375272.5
CDS-3UTR TCA 90 bp ACAATCATTGAAATCATGACACATAGTCTCCCCCTCCCACCACCAAGGTCAGACTGTAGCGAGCAGCCATaGTGCTGTACATGTTGGATA +
Preference number: 4 (lower is better)
Translates to: TIIEIMTHSLPLPPPRSDCSEQP*CCTCWI
Trigger: TATCCAACATGTACAGCATCATGGCTGCTCGCTACA...GTCTGACCTTGGTGGTGGGAGGGGGAGACTATGTGTCATGATTTCAATGATTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp AAAGCATTGAGAACACCAGACGTACAGCCAGACAGAGAGCGTAAGAGAAGAGCATGTAGCGAGCAGCCATaGTGCTGTACATGTTGGATA +
Preference number: 4 (lower is better)
Translates to: KALRTPDVQPDRERKRRACSEQP*CCTCWI
Trigger: TATCCAACATGTACAGCATCATGGCTGCTCGCTACA...TGCTCTTCTCTTACGCTCTCTGTCTGGCTGTACGTCTGGTGTTCTCAATGCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp CCTGAGGCTTTGTGGAATATACCAAAAACAGACGTTTGTGTGCTCAGGCTCGCCATAGTGACTCTGTTCTaGGGTGAAGAGGACCAGTTT +
Preference number: 4 (lower is better)
Translates to: PEALWNIPKTDVCVLRLAIVTLF*GEEDQF
Trigger: AAACTGGTCCTCTTCACCTCAGAACAGAGTCACTAT...GGCGAGCCTGAGCACACAAACGTCTGTTTTTGGTATATTCCACAAAGCCTCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp TCATCCATCATCACTTCAGGTGGAGAAACGCTGACAGTGAGGTCGATTCTCACCATAGTGACTCTGTTCTaGGGTGAAGAGGACCAGTTT +
Preference number: 4 (lower is better)
Translates to: SSIITSGGETLTVRSILTIVTLF*GEEDQF
Trigger: AAACTGGTCCTCTTCACCTCAGAACAGAGTCACTAT...GGTGAGAATCGACCTCACTGTCAGCGTTTCTCCACCTGAAGTGATGATGGATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp ATAAACTCATGTTCTGCGAAGGATGATTACAGATCCTGGCCCAGTCTTTCTATCAGGGTTCCAGGTGACTaGGTTGGCCCTTTCTATGCC +
Preference number: 4 (lower is better)
Translates to: INSCSAKDDYRSWPSLSIRVPGD*VGPFYA
Trigger: GGCATAGAAAGGGCCAACTCAGTCACCTGGAACCCT...GATAGAAAGACTGGGCCAGGATCTGTAATCATCCTTCGCAGAACATGAGTTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp GAACACCAGACGTACAGCCAGACAGAGAGCGTAAGAGAAGAGCAGATGCTATTTGTATACCCTTTTCCTTaGCGAGAATGGCAGAGCACT +
Preference number: 4 (lower is better)
Translates to: EHQTYSQTESVREEQMLFVYPFP*REWQST
Trigger: AGTGCTCTGCCATTCTCGTCAAGGAAAAGGGTATAC...AAATAGCATCTGCTCTTCTCTTACGCTCTCTGTCTGGCTGTACGTCTGGTGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp GCTTTGTGGAATATACCAAAAACAGACGTTTGTGTGCTCAGGCTCGCCATTGAAACATCAGCCAGAACTTaGAGATATCCACGTGGCGGC +
Preference number: 4 (lower is better)
Translates to: ALWNIPKTDVCVLRLAIETSART*RYPRGG
Trigger: GCCGCCACGTGGATATCTTCAAGTTCTGGCTGATGT...TTCAATGGCGAGCCTGAGCACACAAACGTCTGTTTTTGGTATATTCCACAAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp CCTGAGGCTTTGTGGAATATACCAAAAACAGACGTTTGTGTGCTCAGGCTCGCCGCTCAGGCTCGCCATTaGAAACCATCTCAAATTCTT +
Preference number: 4 (lower is better)
Translates to: PEALWNIPKTDVCVLRLAAQARH*KPSQIL
Trigger: AAGAATTTGAGATGGTTTTCAATGGCGAGCCTGAGC...GGCGAGCCTGAGCACACAAACGTCTGTTTTTGGTATATTCCACAAAGCCTCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp CTTAGGTTTCAGCTAAGCGAGTCACAGAGATTGGTCATCAACTACTACAAAATTAGCTTTTCCCGTCGTTaGGGGCTGTCTGGCACACCC +
Preference number: 4 (lower is better)
Translates to: LRFQLSESQRLVINYYKISFSRR*GLSGTP
Trigger: GGGTGTGCCAGACAGCCCTCAACGACGGGAAAAGCT...AATTTTGTAGTAGTTGATGACCAATCTCTGTGACTCGCTTAGCTGAAACCTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp GGTCTTCGGAAATGTTGCCTTAGGTTTCAGCTAAGCGAGTCACAGAGATTGGTCCCATCATCAGGGCTTTaGTTTTTGGAGCCACCTTGT +
Preference number: 4 (lower is better)
Translates to: GLRKCCLRFQLSESQRLVPSSGL*FLEPPC
Trigger: ACAAGGTGGCTCCAAAAATCAAAGCCCTGATGATGG...GACCAATCTCTGTGACTCGCTTAGCTGAAACCTAAGGCAACATTTCCGAAGACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp TCATACTGCTTGTCTGGCTGGAAGAGGTATCCTGCACACATCTGGTTGCATCCTTTGCTAGAAAAGCATTaGGAACACCAGACGTACAGC +
Preference number: 4 (lower is better)
Translates to: SYCLSGWKRYPAHIWLHPLLEKH*EHQTYS
Trigger: GCTGTACGTCTGGTGTTCTCAATGCTTTTCTAGCAA...AGGATGCAACCAGATGTGTGCAGGATACCTCTTCCAGCCAGACAAGCAGTATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp CATACTGCTTGTCTGGCTGGAAGAGGTATCCTGCACACATCTGGTTGCATCCTTTTGCTAGAAAAGCATTaGGAACACCAGACGTACAGC +
Preference number: 4 (lower is better)
Translates to: HTACLAGRGILHTSGCILLLEKH*EHQTYS
Trigger: GCTGTACGTCTGGTGTTCTCAATGCTTTTCTAGCAA...AAGGATGCAACCAGATGTGTGCAGGATACCTCTTCCAGCCAGACAAGCAGTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000493875.5
ENST00000625689.2
CDS-3UTR GCA 90 bp TCTTTAGAGTTGACTTTTATTGACTGCCTTCATCCAGTTTCCAAAATGATGGAGGCCCCAGTTTTCTGGTaGATCCATGGGCCACGCCGC +
Preference number: 4 (lower is better)
Translates to: SLELTFIDCLHPVSKMMEAPVFW*IHGPRR
Trigger: GCGGCGTGGCCCATGGATGCACCAGAAAACTGGGGC...CTCCATCATTTTGGAAACTGGATGAAGGCAGTCAATAAAAGTCAACTCTAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000486850.1
CDS-3UTR GCA 90 bp AAACCATGTGTGCAGTTACCATCACCTCTGGAGGTCACAATCATGCTTTGGTTCAGGTTCTTGGAGGATTaGCTCTCCTTGAAGGCACTC +
Preference number: 4 (lower is better)
Translates to: KPCVQLPSPLEVTIMLWFRFLED*LSLKAL
Trigger: GAGTGCCTTCAAGGAGAGGCAATCCTCCAAGAACCT...GAACCAAAGCATGATTGTGACCTCCAGAGGTGATGGTAACTGCACACATGGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344257.9
ENST00000375272.5
CDS-3UTR GCA 90 bp CTTAGGTTTCAGCTAAGCGAGTCACAGAGATTGGTCATCAACTACTACAAAATTAGAAGTCAGTCTCTGTaGGCCGGAAGCGGGCATCCC +
Preference number: 4 (lower is better)
Translates to: LRFQLSESQRLVINYYKIRSQSL*AGSGHP
Trigger: GGGATGCCCGCTTCCGGCGCACAGAGACTGACTTCT...AATTTTGTAGTAGTTGATGACCAATCTCTGTGACTCGCTTAGCTGAAACCTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR GCA 90 bp AAAGAATATGTCCATTTTCCTTGGGAGGCCCCTGGAAATTTAGGAGGAAGACCCATCGAGGATGACCTGTaGGAACCCCATACTTCAAGG +
Preference number: 4 (lower is better)
Translates to: KEYVHFPWEAPGNLGGRPIEDDL*EPHTSR
Trigger: CCTTGAAGTATGGGGTTCGCACAGGTCATCCTCGAT...GGGTCTTCCTCCTAAATTTCCAGGGGCCTCCCAAGGAAAATGGACATATTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344257.9
ENST00000375272.5
CDS-3UTR GCA 90 bp CTCTTGTATCGGATCAAAAGCTCCATAAACAGTCGTGCCAGCAGTTGCATTGACATCGAGGATGACCTGTaGGAACCCCATACTTCAAGG +
Preference number: 4 (lower is better)
Translates to: LLYRIKSSINSRASSCIDIEDDL*EPHTSR
Trigger: CCTTGAAGTATGGGGTTCGCACAGGTCATCCTCGAT...GTCAATGCAACTGCTGGCACGACTGTTTATGGAGCTTTTGATCCGATACAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414527.6
CDS-3UTR GCA 90 bp TCATCCATCATCACTTCAGGTGGAGAAACGCTGACAGTGAGGTCGATTCTCACCAGTCGTGCCAGCAGTTaGATTGACATAAAAGGGAAC +
Preference number: 4 (lower is better)
Translates to: SSIITSGGETLTVRSILTSRASS*IDIKGN
Trigger: GTTCCCTTTTATGTCAATGCAACTGCTGGCACGACT...GGTGAGAATCGACCTCACTGTCAGCGTTTCTCCACCTGAAGTGATGATGGATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR GCA 90 bp CCCCTGAGGCTTTGTGGAATATACCAAAAACAGACGTTTGTGTGCTCAGGCTCGAGTCGTGCCAGCAGTTaGATTGACATAAAAGGGAAC +
Preference number: 4 (lower is better)
Translates to: PLRLCGIYQKQTFVCSGSSRASS*IDIKGN
Trigger: GTTCCCTTTTATGTCAATGCAACTGCTGGCACGACT...CGAGCCTGAGCACACAAACGTCTGTTTTTGGTATATTCCACAAAGCCTCAGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR GCA 90 bp ACAATCATTGAAATCATGACACATAGTCTCCCCCTCCCACCACCAAGGTCAGACCTGCACACATCTGGTTaGATCCTTGGAGTATACCCT +
Preference number: 4 (lower is better)
Translates to: TIIEIMTHSLPLPPPRSDLHTSG*ILGVYP
Trigger: AGGGTATACTCCAAGGATGCAACCAGATGTGTGCAG...GTCTGACCTTGGTGGTGGGAGGGGGAGACTATGTGTCATGATTTCAATGATTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR GCA 90 bp GGTCTTCGGAAATGTTGCCTTAGGTTTCAGCTAAGCGAGTCACAGAGATTGGTCCTGCACACATCTGGTTaGATCCTTGGAGTATACCCT +
Preference number: 4 (lower is better)
Translates to: GLRKCCLRFQLSESQRLVLHTSG*ILGVYP
Trigger: AGGGTATACTCCAAGGATGCAACCAGATGTGTGCAG...GACCAATCTCTGTGACTCGCTTAGCTGAAACCTAAGGCAACATTTCCGAAGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR GCA 90 bp CGGAAATGTTGCCTTAGGTTTCAGCTAAGCGAGTCACAGAGATTGGTCATCAACCTGGAAGAGGTATCCTaGACACATCTGGTTGCATCC +
Preference number: 4 (lower is better)
Translates to: RKCCLRFQLSESQRLVINLEEVS*THLVAS
Trigger: GGATGCAACCAGATGTGTGCAGGATACCTCTTCCAG...GTTGATGACCAATCTCTGTGACTCGCTTAGCTGAAACCTAAGGCAACATTTCCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR GCA 90 bp CGGAAATGTTGCCTTAGGTTTCAGCTAAGCGAGTCACAGAGATTGGTCATCAACTCCCACTGTGCCCTTTaGTTTCCACATCAGCCAGAA +
Preference number: 4 (lower is better)
Translates to: RKCCLRFQLSESQRLVINSHCAL*FPHQPE
Trigger: TTCTGGCTGATGTGGAAAGCAAAGGGCACAGTGGGA...GTTGATGACCAATCTCTGTGACTCGCTTAGCTGAAACCTAAGGCAACATTTCCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR GCA 90 bp GGAGACATCATACTGCTTGTCTGGCTGGAAGAGGTATCCTGCACACATCTGGTTGGTCTTCGGAAATGTTaGCTTAGGTTTCAGCTAAGC +
Preference number: 4 (lower is better)
Translates to: GDIILLVWLEEVSCTHLVGLRKC*LRFQLS
Trigger: GCTTAGCTGAAACCTAAGGCAACATTTCCGAAGACC...AACCAGATGTGTGCAGGATACCTCTTCCAGCCAGACAAGCAGTATGATGTCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493875.5
ENST00000625689.2
CDS-3UTR GCA 90 bp CGGAAATGTTGCCTTAGGTTTCAGCTAAGCGAGTCACAGAGATTGGTCATCAACGAACCACAGTCACCTTaGACTCCAGACAGCCAGAAA +
Preference number: 4 (lower is better)
Translates to: RKCCLRFQLSESQRLVINEPQSP*TPDSQK
Trigger: TTTCTGGCTGTCTGGAGTGCAAGGTGACTGTGGTTC...GTTGATGACCAATCTCTGTGACTCGCTTAGCTGAAACCTAAGGCAACATTTCCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493875.5
CDS-3UTR CCA 90 bp AAAGCATTGAGAACACCAGACGTACAGCCAGACAGAGAGCGTAAGAGAAGAGCAGAAAGTCCAGCACCTTaGTGGAGCGATCAAATGTCT +
Preference number: 4 (lower is better)
Translates to: KALRTPDVQPDRERKRRAESPAP*WSDQMS
Trigger: AGACATTTGATCGCTCCACCAAGGTGCTGGACTTTC...TGCTCTTCTCTTACGCTCTCTGTCTGGCTGTACGTCTGGTGTTCTCAATGCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CCA 90 bp CTGAGGCTTTGTGGAATATACCAAAAACAGACGTTTGTGTGCTCAGGCTCGCCAGAAAGTCCAGCACCTTaGTGGAGCGATCAAATGTCT +
Preference number: 4 (lower is better)
Translates to: LRLCGIYQKQTFVCSGSPESPAP*WSDQMS
Trigger: AGACATTTGATCGCTCCACCAAGGTGCTGGACTTTC...TGGCGAGCCTGAGCACACAAACGTCTGTTTTTGGTATATTCCACAAAGCCTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CCA 90 bp AACCATGTGTGCAGTTACCATCACCTCTGGAGGTCACAATCATGCTTTGGTTCTTTCCAGCAACTGGTGTaGGTGATGAAAGTCCAGCAC +
Preference number: 4 (lower is better)
Translates to: NHVCSYHHLWRSQSCFGSFQQLV*VMKVQH
Trigger: GTGCTGGACTTTCATCACCCACACCAGTTGCTGGAA...AGAACCAAAGCATGATTGTGACCTCCAGAGGTGATGGTAACTGCACACATGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344257.9
ENST00000375272.5
CDS-3UTR CCA 90 bp AAACCATGTGTGCAGTTACCATCACCTCTGGAGGTCACAATCATGCTTTGGTTCTTCCAGCAACTGGTGTaGGTGATGAAAGTCCAGCAC +
Preference number: 4 (lower is better)
Translates to: KPCVQLPSPLEVTIMLWFFQQLV*VMKVQH
Trigger: GTGCTGGACTTTCATCACCCACACCAGTTGCTGGAA...GAACCAAAGCATGATTGTGACCTCCAGAGGTGATGGTAACTGCACACATGGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344257.9
ENST00000375272.5
CDS-3UTR CCA 90 bp CCATGTGTGCAGTTACCATCACCTCTGGAGGTCACAATCATGCTTTGGTTCTGCTGTCTGATGGCATGTTaGTATTGGCCGTTGATGTCA +
Preference number: 4 (lower is better)
Translates to: PCVQLPSPLEVTIMLWFCCLMAC*YWPLMS
Trigger: TGACATCAACGGCCAATACCAACATGCCATCAGACA...GCAGAACCAAAGCATGATTGTGACCTCCAGAGGTGATGGTAACTGCACACATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344257.9
ENST00000375272.5
CDS-3UTR CCA 90 bp AGTTACCATCACCTCTGGAGGTCACAATCATGCTTTGGTTCTGCTCTGAGCCCCAGTTACCATCACCTCTaGAGGTCACAATCATGCTTT +
Preference number: 4 (lower is better)
Translates to: SYHHLWRSQSCFGSALSPSYHHL*RSQSCF
Trigger: AAAGCATGATTGTGACCTCCAGAGGTGATGGTAACT...GGGGCTCAGAGCAGAACCAAAGCATGATTGTGACCTCCAGAGGTGATGGTAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344257.9
ENST00000375272.5
CDS-3UTR CCA 90 bp CCTGAGGCTTTGTGGAATATACCAAAAACAGACGTTTGTGTGCTCAGGCTCGCCTGTACATGTTGGATATaGCGCCCCCAGGAGAAAATA +
Preference number: 4 (lower is better)
Translates to: PEALWNIPKTDVCVLRLACTCWI*RPQEKI
Trigger: TATTTTCTCCTGGGGGCGCCATATCCAACATGTACA...GGCGAGCCTGAGCACACAAACGTCTGTTTTTGGTATATTCCACAAAGCCTCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CCA 90 bp AAAGCATTGAGAACACCAGACGTACAGCCAGACAGAGAGCGTAAGAGAAGAGCAATCATACTGCTTGTCTaGCTGGAAGAGGTATCCTGC +
Preference number: 4 (lower is better)
Translates to: KALRTPDVQPDRERKRRAIILLV*LEEVSC
Trigger: GCAGGATACCTCTTCCAGCCAGACAAGCAGTATGAT...TGCTCTTCTCTTACGCTCTCTGTCTGGCTGTACGTCTGGTGTTCTCAATGCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CCA 90 bp AGAACACCAGACGTACAGCCAGACAGAGAGCGTAAGAGAAGAGCAGATGCTATTATCATACTGCTTGTCTaGCTGGAAGAGGTATCCTGC +
Preference number: 4 (lower is better)
Translates to: RTPDVQPDRERKRRADAIIILLV*LEEVSC
Trigger: GCAGGATACCTCTTCCAGCCAGACAAGCAGTATGAT...AATAGCATCTGCTCTTCTCTTACGCTCTCTGTCTGGCTGTACGTCTGGTGTTCT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CCA 90 bp CCTGAGGCTTTGTGGAATATACCAAAAACAGACGTTTGTGTGCTCAGGCTCGCCGATGATTACAGATCCTaGCCCAGTCTTTCTATCTCC +
Preference number: 4 (lower is better)
Translates to: PEALWNIPKTDVCVLRLADDYRS*PSLSIS
Trigger: GGAGATAGAAAGACTGGGCCAGGATCTGTAATCATC...GGCGAGCCTGAGCACACAAACGTCTGTTTTTGGTATATTCCACAAAGCCTCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CCA 90 bp TCATCCATCATCACTTCAGGTGGAGAAACGCTGACAGTGAGGTCGATTCTCACCTATAGAGGTTTGTTCTaGAGTGCCAGAGGGAAAAGG +
Preference number: 4 (lower is better)
Translates to: SSIITSGGETLTVRSILTYRGLF*SARGKR
Trigger: CCTTTTCCCTCTGGCACTCCAGAACAAACCTCTATA...GGTGAGAATCGACCTCACTGTCAGCGTTTCTCCACCTGAAGTGATGATGGATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CCA 90 bp CCTGAGGCTTTGTGGAATATACCAAAAACAGACGTTTGTGTGCTCAGGCTCGCCTATAGAGGTTTGTTCTaGAGTGCCAGAGGGAAAAGG +
Preference number: 4 (lower is better)
Translates to: PEALWNIPKTDVCVLRLAYRGLF*SARGKR
Trigger: CCTTTTCCCTCTGGCACTCCAGAACAAACCTCTATA...GGCGAGCCTGAGCACACAAACGTCTGTTTTTGGTATATTCCACAAAGCCTCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CCA 90 bp AAAGCATTGAGAACACCAGACGTACAGCCAGACAGAGAGCGTAAGAGAAGAGCACATCATCACTTCAGGTaGAGAAACGCTGACAGTGAG +
Preference number: 4 (lower is better)
Translates to: KALRTPDVQPDRERKRRAHHHFR*RNADSE
Trigger: CTCACTGTCAGCGTTTCTCCACCTGAAGTGATGATG...TGCTCTTCTCTTACGCTCTCTGTCTGGCTGTACGTCTGGTGTTCTCAATGCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CCA 90 bp AGAACACCAGACGTACAGCCAGACAGAGAGCGTAAGAGAAGAGCAGATGCTATTCATCATCACTTCAGGTaGAGAAACGCTGACAGTGAG +
Preference number: 4 (lower is better)
Translates to: RTPDVQPDRERKRRADAIHHHFR*RNADSE
Trigger: CTCACTGTCAGCGTTTCTCCACCTGAAGTGATGATG...AATAGCATCTGCTCTTCTCTTACGCTCTCTGTCTGGCTGTACGTCTGGTGTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CCA 90 bp CACGTGGCGGCCACACTGAATTGCCTTGTCCCCGGTGTCGTAGGAGACATCATAGACGCCTCTTTAACATaGTACATCTCTGAATATAAA +
Preference number: 4 (lower is better)
Translates to: HVAATLNCLVPGVVGDIIDASLT*YISEYK
Trigger: TTTATATTCAGAGATGTACCATGTTAAAGAGGCGTC...TATGATGTCTCCTACGACACCGGGGACAAGGCAATTCAGTGTGGCCGCCACGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp AGAACACCAGACGTACAGCCAGACAGAGAGCGTAAGAGAAGAGCAGATGCTATTATAGTGACTCTGTTCTaGGGTGAAGAGGACCAGTTT +
Preference number: 4 (lower is better)
Translates to: RTPDVQPDRERKRRADAIIVTLF*GEEDQF
Trigger: AAACTGGTCCTCTTCACCTCAGAACAGAGTCACTAT...AATAGCATCTGCTCTTCTCTTACGCTCTCTGTCTGGCTGTACGTCTGGTGTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp ATAAACTCATGTTCTGCGAAGGATGATTACAGATCCTGGCCCAGTCTTTCTATCCCCTTTCTATGCCGTTaGGTTTATGGCGGTGCTTCC +
Preference number: 4 (lower is better)
Translates to: INSCSAKDDYRSWPSLSIPFLCR*VYGGAS
Trigger: GGAAGCACCGCCATAAACTCAACGGCATAGAAAGGG...GATAGAAAGACTGGGCCAGGATCTGTAATCATCCTTCGCAGAACATGAGTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp TCATCCATCATCACTTCAGGTGGAGAAACGCTGACAGTGAGGTCGATTCTCACCGTTCCAGGCATTTGTTaGTCTGGTTTTCAAATCCCA +
Preference number: 4 (lower is better)
Translates to: SSIITSGGETLTVRSILTVPGIC*SGFQIP
Trigger: TGGGATTTGAAAACCAGATCAACAAATGCCTGGAAC...GGTGAGAATCGACCTCACTGTCAGCGTTTCTCCACCTGAAGTGATGATGGATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp AGAACACCAGACGTACAGCCAGACAGAGAGCGTAAGAGAAGAGCAGATGCTATTGCTCAGGCTCGCCATTaGAAACCATCTCAAATTCTT +
Preference number: 4 (lower is better)
Translates to: RTPDVQPDRERKRRADAIAQARH*KPSQIL
Trigger: AAGAATTTGAGATGGTTTTCAATGGCGAGCCTGAGC...AATAGCATCTGCTCTTCTCTTACGCTCTCTGTCTGGCTGTACGTCTGGTGTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp GGTCTTCGGAAATGTTGCCTTAGGTTTCAGCTAAGCGAGTCACAGAGATTGGTCCAATCATTGAAATCATaGCACATAGTCTCCCCCTCC +
Preference number: 4 (lower is better)
Translates to: GLRKCCLRFQLSESQRLVQSLKS*HIVSPS
Trigger: GGAGGGGGAGACTATGTGTCATGATTTCAATGATTG...GACCAATCTCTGTGACTCGCTTAGCTGAAACCTAAGGCAACATTTCCGAAGACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp GAACACCAGACGTACAGCCAGACAGAGAGCGTAAGAGAAGAGCAGATGCTATTTTTGCTAGAAAAGCATTaGGAACACCAGACGTACAGC +
Preference number: 4 (lower is better)
Translates to: EHQTYSQTESVREEQMLFLLEKH*EHQTYS
Trigger: GCTGTACGTCTGGTGTTCTCAATGCTTTTCTAGCAA...AAATAGCATCTGCTCTTCTCTTACGCTCTCTGTCTGGCTGTACGTCTGGTGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp GAACACCAGACGTACAGCCAGACAGAGAGCGTAAGAGAAGAGCAGATGCTATTTCCTGGTCACTTTATCTaGGATCTTCAGAAGGTCTTC +
Preference number: 4 (lower is better)
Translates to: EHQTYSQTESVREEQMLFPGHFI*DLQKVF
Trigger: GAAGACCTTCTGAAGATCTCAGATAAAGTGACCAGG...AAATAGCATCTGCTCTTCTCTTACGCTCTCTGTCTGGCTGTACGTCTGGTGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp GGAGACATCATACTGCTTGTCTGGCTGGAAGAGGTATCCTGCACACATCTGGTTCTTCAAAAACAGTTGTaGGCCTGGTCACTTTATCTG +
Preference number: 4 (lower is better)
Translates to: GDIILLVWLEEVSCTHLVLQKQL*AWSLYL
Trigger: CAGATAAAGTGACCAGGCTCACAACTGTTTTTGAAG...AACCAGATGTGTGCAGGATACCTCTTCCAGCCAGACAAGCAGTATGATGTCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000493875.5
ENST00000625689.2
CDS-3UTR GCA 90 bp AACCATGTGTGCAGTTACCATCACCTCTGGAGGTCACAATCATGCTTTGGTTCTACTTCAAGGTGTCTCTaGAGTCAACCAGGATCTGCT +
Preference number: 4 (lower is better)
Translates to: NHVCSYHHLWRSQSCFGSTSRCL*SQPGSA
Trigger: AGCAGATCCTGGTTGACTGCAGAGACACCTTGAAGT...AGAACCAAAGCATGATTGTGACCTCCAGAGGTGATGGTAACTGCACACATGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344257.9
ENST00000375272.5
CDS-3UTR GCA 90 bp AGAACACCAGACGTACAGCCAGACAGAGAGCGTAAGAGAAGAGCAGATGCTATTAGTTCCAAAGCCAAGTaGAGCCCCAGCTTTCTTTAT +
Preference number: 4 (lower is better)
Translates to: RTPDVQPDRERKRRADAISSKAK*SPSFLY
Trigger: ATAAAGAAAGCTGGGGCTGCACTTGGCTTTGGAACT...AATAGCATCTGCTCTTCTCTTACGCTCTCTGTCTGGCTGTACGTCTGGTGTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR GCA 90 bp AAAGCATTGAGAACACCAGACGTACAGCCAGACAGAGAGCGTAAGAGAAGAGCAAGTTCCAAAGCCAAGTaGAGCCCCAGCTTTCTTTAT +
Preference number: 4 (lower is better)
Translates to: KALRTPDVQPDRERKRRASSKAK*SPSFLY
Trigger: ATAAAGAAAGCTGGGGCTGCACTTGGCTTTGGAACT...TGCTCTTCTCTTACGCTCTCTGTCTGGCTGTACGTCTGGTGTTCTCAATGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR GCA 90 bp ACAATCATTGAAATCATGACACATAGTCTCCCCCTCCCACCACCAAGGTCAGACAGTTCCAAAGCCAAGTaGAGCCCCAGCTTTCTTTAT +
Preference number: 4 (lower is better)
Translates to: TIIEIMTHSLPLPPPRSDSSKAK*SPSFLY
Trigger: ATAAAGAAAGCTGGGGCTGCACTTGGCTTTGGAACT...GTCTGACCTTGGTGGTGGGAGGGGGAGACTATGTGTCATGATTTCAATGATTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR GCA 90 bp GAACACCAGACGTACAGCCAGACAGAGAGCGTAAGAGAAGAGCAGATGCTATTTAGTCGTGCCAGCAGTTaGATTGACATAAAAGGGAAC +
Preference number: 4 (lower is better)
Translates to: EHQTYSQTESVREEQMLFSRASS*IDIKGN
Trigger: GTTCCCTTTTATGTCAATGCAACTGCTGGCACGACT...AAATAGCATCTGCTCTTCTCTTACGCTCTCTGTCTGGCTGTACGTCTGGTGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR GCA 90 bp TTTGTGTGCTCAGGCTCGCCATTGAAAACCATCTCAAATTCTTCTCTGTTTTTAGCGGCCACACTGAATTaGCTTGTCCCCGGTGTCGTA +
Preference number: 4 (lower is better)
Translates to: FVCSGSPLKTISNSSLFLAATLN*LVPGVV
Trigger: TACGACACCGGGGACAAGGCAATTCAGTGTGGCCGC...TAAAAACAGAGAAGAATTTGAGATGGTTTTCAATGGCGAGCCTGAGCACACAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR GCA 90 bp ACAATCATTGAAATCATGACACATAGTCTCCCCCTCCCACCACCAAGGTCAGACAAACAGACGTTTGTGTaGTCAGGCTCGCCATTGAAA +
Preference number: 4 (lower is better)
Translates to: TIIEIMTHSLPLPPPRSDKQTFV*SGSPLK
Trigger: TTTCAATGGCGAGCCTGAGCACACAAACGTCTGTTT...GTCTGACCTTGGTGGTGGGAGGGGGAGACTATGTGTCATGATTTCAATGATTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR GCA 90 bp GAACACCAGACGTACAGCCAGACAGAGAGCGTAAGAGAAGAGCAGATGCTATTTTTGGAGCGGGAAACATaGCGTGATCTATTACTAAGC +
Preference number: 4 (lower is better)
Translates to: EHQTYSQTESVREEQMLFLERET*RDLLLS
Trigger: GCTTAGTAATAGATCACGGCATGTTTCCCGCTCCAA...AAATAGCATCTGCTCTTCTCTTACGCTCTCTGTCTGGCTGTACGTCTGGTGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR GCA 90 bp ACAATCATTGAAATCATGACACATAGTCTCCCCCTCCCACCACCAAGGTCAGACGGTCTTCGGAAATGTTaGCTTAGGTTTCAGCTAAGC +
Preference number: 4 (lower is better)
Translates to: TIIEIMTHSLPLPPPRSDGLRKC*LRFQLS
Trigger: GCTTAGCTGAAACCTAAGGCAACATTTCCGAAGACC...GTCTGACCTTGGTGGTGGGAGGGGGAGACTATGTGTCATGATTTCAATGATTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CCA 90 bp TTTGTGTGCTCAGGCTCGCCATTGAAAACCATCTCAAATTCTTCTCTGTTTTTAGGTTGCGGACGAAGATaGGGTCGAAGACGCCATCAG +
Preference number: 4 (lower is better)
Translates to: FVCSGSPLKTISNSSLFLGCGRR*GRRRHQ
Trigger: CTGATGGCGTCTTCGACCCCATCTTCGTCCGCAACC...TAAAAACAGAGAAGAATTTGAGATGGTTTTCAATGGCGAGCCTGAGCACACAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CCA 90 bp TTTGTGTGCTCAGGCTCGCCATTGAAAACCATCTCAAATTCTTCTCTGTTTTTATTTCTGGTGCATCCATaGGCCACGCCGCACCAGGTA +
Preference number: 4 (lower is better)
Translates to: FVCSGSPLKTISNSSLFLFLVHP*ATPHQV
Trigger: TACCTGGTGCGGCGTGGCCCATGGATGCACCAGAAA...TAAAAACAGAGAAGAATTTGAGATGGTTTTCAATGGCGAGCCTGAGCACACAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CCA 90 bp AACCATGTGTGCAGTTACCATCACCTCTGGAGGTCACAATCATGCTTTGGTTCTGAAAGTCCAGCACCTTaGTGGAGCGATCAAATGTCT +
Preference number: 4 (lower is better)
Translates to: NHVCSYHHLWRSQSCFGSESPAP*WSDQMS
Trigger: AGACATTTGATCGCTCCACCAAGGTGCTGGACTTTC...AGAACCAAAGCATGATTGTGACCTCCAGAGGTGATGGTAACTGCACACATGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344257.9
ENST00000375272.5
CDS-3UTR CCA 90 bp TTTGTGTGCTCAGGCTCGCCATTGAAAACCATCTCAAATTCTTCTCTGTTTTTATCCAGGGACTCGGGGTaGTCAGAGAGCTCCAAGTTG +
Preference number: 4 (lower is better)
Translates to: FVCSGSPLKTISNSSLFLSRDSG*SESSKL
Trigger: CAACTTGGAGCTCTCTGACCACCCCGAGTCCCTGGA...TAAAAACAGAGAAGAATTTGAGATGGTTTTCAATGGCGAGCCTGAGCACACAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CCA 90 bp AAAGCATTGAGAACACCAGACGTACAGCCAGACAGAGAGCGTAAGAGAAGAGCATGTACATGTTGGATATaGCGCCCCCAGGAGAAAATA +
Preference number: 4 (lower is better)
Translates to: KALRTPDVQPDRERKRRACTCWI*RPQEKI
Trigger: TATTTTCTCCTGGGGGCGCCATATCCAACATGTACA...TGCTCTTCTCTTACGCTCTCTGTCTGGCTGTACGTCTGGTGTTCTCAATGCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CCA 90 bp TGCACTTTATCAAAATCACATTGTCAGTTCCAAAGCCAAGTGCAGCCCCAGCTTATGCCGTTGAGTTTATaGCGGTGCTTCCTGGACATG +
Preference number: 4 (lower is better)
Translates to: CTLSKSHCQFQSQVQPQLMPLSL*RCFLDM
Trigger: CATGTCCAGGAAGCACCGCCATAAACTCAACGGCAT...AAGCTGGGGCTGCACTTGGCTTTGGAACTGACAATGTGATTTTGATAAAGTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414527.6
CDS-3UTR CCA 90 bp TTTGTGTGCTCAGGCTCGCCATTGAAAACCATCTCAAATTCTTCTCTGTTTTTAAGACTGGGTAGCGGCTaGGTTGGAGATGACCATCCG +
Preference number: 4 (lower is better)
Translates to: FVCSGSPLKTISNSSLFLRLGSG*VGDDHP
Trigger: CGGATGGTCATCTCCAACCCAGCCGCTACCCAGTCT...TAAAAACAGAGAAGAATTTGAGATGGTTTTCAATGGCGAGCCTGAGCACACAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CCA 90 bp AGAACACCAGACGTACAGCCAGACAGAGAGCGTAAGAGAAGAGCAGATGCTATTGATGATTACAGATCCTaGCCCAGTCTTTCTATCTCC +
Preference number: 4 (lower is better)
Translates to: RTPDVQPDRERKRRADAIDDYRS*PSLSIS
Trigger: GGAGATAGAAAGACTGGGCCAGGATCTGTAATCATC...AATAGCATCTGCTCTTCTCTTACGCTCTCTGTCTGGCTGTACGTCTGGTGTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CCA 90 bp CGGAAATGTTGCCTTAGGTTTCAGCTAAGCGAGTCACAGAGATTGGTCATCAACTTTTCCTGGAGTTGTTaGACAAGCTGGTTGGCAGCA +
Preference number: 4 (lower is better)
Translates to: RKCCLRFQLSESQRLVINFSWSC*TSWLAA
Trigger: TGCTGCCAACCAGCTTGTCCAACAACTCCAGGAAAA...GTTGATGACCAATCTCTGTGACTCGCTTAGCTGAAACCTAAGGCAACATTTCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp CCCAAAGTCACAAAAGCAGTTTCATGTGGGTTCAGAGAGAATAATGACATTTCTAGGATTGCCTCTCCTTaGAGGCACTCACAAGGCGAC +
Preference number: 4 (lower is better)
Translates to: PKVTKAVSCGFRENNDISRIASP*RHSQGD
Trigger: GTCGCCTTGTGAGTGCCTTCAAGGAGAGGCAATCCT...AGAAATGTCATTATTCTCTCTGAACCCACATGAAACTGCTTTTGTGACTTTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486850.1
CDS-3UTR TCA 90 bp CTGAGGCTTTGTGGAATATACCAAAAACAGACGTTTGTGTGCTCAGGCTCGCCAGTGTTATTTGTTCCATaGGGACAAACACTGGTGCAA +
Preference number: 4 (lower is better)
Translates to: LRLCGIYQKQTFVCSGSPVLFVP*GQTLVQ
Trigger: TTGCACCAGTGTTTGTCCTCATGGAACAAATAACAC...TGGCGAGCCTGAGCACACAAACGTCTGTTTTTGGTATATTCCACAAAGCCTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp GGAGACATCATACTGCTTGTCTGGCTGGAAGAGGTATCCTGCACACATCTGGTTATCACCATCTTTACTTaGCCATCCAACTATCTCTCT +
Preference number: 4 (lower is better)
Translates to: GDIILLVWLEEVSCTHLVITIFT*PSNYLS
Trigger: AGAGAGATAGTTGGATGGTCAAGTAAAGATGGTGAT...AACCAGATGTGTGCAGGATACCTCTTCCAGCCAGACAAGCAGTATGATGTCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp TTTGTGTGCTCAGGCTCGCCATTGAAAACCATCTCAAATTCTTCTCTGTTTTTAACGCCCATCATCTTGTaGGGGTTCCAGGTGACTGAG +
Preference number: 4 (lower is better)
Translates to: FVCSGSPLKTISNSSLFLTPIIL*GFQVTE
Trigger: CTCAGTCACCTGGAACCCTCACAAGATGATGGGCGT...TAAAAACAGAGAAGAATTTGAGATGGTTTTCAATGGCGAGCCTGAGCACACAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp GAACACCAGACGTACAGCCAGACAGAGAGCGTAAGAGAAGAGCAGATGCTATTTGTTCCAGGCATTTGTTaGTCTGGTTTTCAAATCCCA +
Preference number: 4 (lower is better)
Translates to: EHQTYSQTESVREEQMLFVPGIC*SGFQIP
Trigger: TGGGATTTGAAAACCAGATCAACAAATGCCTGGAAC...AAATAGCATCTGCTCTTCTCTTACGCTCTCTGTCTGGCTGTACGTCTGGTGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp GGAGACATCATACTGCTTGTCTGGCTGGAAGAGGTATCCTGCACACATCTGGTTTATGTTTTCCCTCAATaGAATGGCCTGTGTGTTTCA +
Preference number: 4 (lower is better)
Translates to: GDIILLVWLEEVSCTHLVYVFPQ*NGLCVS
Trigger: TGAAACACACAGGCCATTTCATTGAGGGAAAACATA...AACCAGATGTGTGCAGGATACCTCTTCCAGCCAGACAAGCAGTATGATGTCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp ATAAACTCATGTTCTGCGAAGGATGATTACAGATCCTGGCCCAGTCTTTCTATCCTAATGGGGAGGGTGTaGCTTGTCATTTGGTGGTGT +
Preference number: 4 (lower is better)
Translates to: INSCSAKDDYRSWPSLSILMGRV*LVIWWC
Trigger: ACACCACCAAATGACAAGTCACACCCTCCCCATTAG...GATAGAAAGACTGGGCCAGGATCTGTAATCATCCTTCGCAGAACATGAGTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp CGGAAATGTTGCCTTAGGTTTCAGCTAAGCGAGTCACAGAGATTGGTCATCAACCAATCATTGAAATCATaGCACATAGTCTCCCCCTCC +
Preference number: 4 (lower is better)
Translates to: RKCCLRFQLSESQRLVINQSLKS*HIVSPS
Trigger: GGAGGGGGAGACTATGTGTCATGATTTCAATGATTG...GTTGATGACCAATCTCTGTGACTCGCTTAGCTGAAACCTAAGGCAACATTTCCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp AGAACACCAGACGTACAGCCAGACAGAGAGCGTAAGAGAAGAGCAGATGCTATTCTTCAAAAACAGTTGTaGGCCTGGTCACTTTATCTG +
Preference number: 4 (lower is better)
Translates to: RTPDVQPDRERKRRADAILQKQL*AWSLYL
Trigger: CAGATAAAGTGACCAGGCTCACAACTGTTTTTGAAG...AATAGCATCTGCTCTTCTCTTACGCTCTCTGTCTGGCTGTACGTCTGGTGTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp GGTCTTCGGAAATGTTGCCTTAGGTTTCAGCTAAGCGAGTCACAGAGATTGGTCCCTATTGGCCAATTGTaGGAAGTTAAATCCATCGAC +
Preference number: 4 (lower is better)
Translates to: GLRKCCLRFQLSESQRLVPIGQL*EVKSID
Trigger: GTCGATGGATTTAACTTCTCACAATTGGCCAATAGG...GACCAATCTCTGTGACTCGCTTAGCTGAAACCTAAGGCAACATTTCCGAAGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp ACAATCATTGAAATCATGACACATAGTCTCCCCCTCCCACCACCAAGGTCAGACCCTATTGGCCAATTGTaGGAAGTTAAATCCATCGAC +
Preference number: 4 (lower is better)
Translates to: TIIEIMTHSLPLPPPRSDPIGQL*EVKSID
Trigger: GTCGATGGATTTAACTTCTCACAATTGGCCAATAGG...GTCTGACCTTGGTGGTGGGAGGGGGAGACTATGTGTCATGATTTCAATGATTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp ACAATCATTGAAATCATGACACATAGTCTCCCCCTCCCACCACCAAGGTCAGACATGATGCATGTTTACTaGATAGTTGGGATGCCACGT +
Preference number: 4 (lower is better)
Translates to: TIIEIMTHSLPLPPPRSDMMHVY*IVGMPR
Trigger: ACGTGGCATCCCAACTATTCAGTAAACATGCATCAT...GTCTGACCTTGGTGGTGGGAGGGGGAGACTATGTGTCATGATTTCAATGATTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000493875.5
ENST00000625689.2
CDS-3UTR GCA 90 bp GTGACTGAGTTGGCCCTTTCTATGCCGTTGAGTTTATGGCGGTGCTTCCTGGACTTTCTCACATATATCTaGAATCTCTTGTATCGGATC +
Preference number: 4 (lower is better)
Translates to: VTELALSMPLSLWRCFLDFLTYI*NLLYRI
Trigger: GATCCGATACAAGAGATTGCAGATATATGTGAGAAA...GTCCAGGAAGCACCGCCATAAACTCAACGGCATAGAAAGGGCCAACTCAGTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414527.6
CDS-3UTR GCA 90 bp AGAACACCAGACGTACAGCCAGACAGAGAGCGTAAGAGAAGAGCAGATGCTATTCAGGCAGCATCGACATaGAACCAAAGGTTATATTTC +
Preference number: 4 (lower is better)
Translates to: RTPDVQPDRERKRRADAIQAAST*NQRLYF
Trigger: GAAATATAACCTTTGGTTGCATGTCGATGCTGCCTG...AATAGCATCTGCTCTTCTCTTACGCTCTCTGTCTGGCTGTACGTCTGGTGTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358196.8
CDS-3UTR CCA 90 bp CCAAAGTCACAAAAGCAGTTTCATGTGGGTTCAGAGAGAATAATGACATTTCTTTTTCTGGTGCATCCATaGGCCACGCCGCACCAGGTA +
Preference number: 4 (lower is better)
Translates to: PKSQKQFHVGSERIMTFLFLVHP*ATPHQV
Trigger: TACCTGGTGCGGCGTGGCCCATGGATGCACCAGAAA...AAGAAATGTCATTATTCTCTCTGAACCCACATGAAACTGCTTTTGTGACTTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486850.1
CDS-3UTR CCA 90 bp AGAATATGTCCATTTTCCTTGGGAGGCCCCTGGAAATTTAGGAGGAAGACCCTTTGTCTGATGGCATGTTaGTATTGGCCGTTGATGTCA +
Preference number: 4 (lower is better)
Translates to: RICPFSLGGPWKFRRKTLCLMAC*YWPLMS
Trigger: TGACATCAACGGCCAATACCAACATGCCATCAGACA...AAGGGTCTTCCTCCTAAATTTCCAGGGGCCTCCCAAGGAAAATGGACATATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344257.9
ENST00000375272.5
CDS-3UTR CCA 90 bp GGTCTTCGGAAATGTTGCCTTAGGTTTCAGCTAAGCGAGTCACAGAGATTGGTCTATCCTGCACACATCTaGTTGCATCCTTGGAGTATA +
Preference number: 4 (lower is better)
Translates to: GLRKCCLRFQLSESQRLVYPAHI*LHPWSI
Trigger: TATACTCCAAGGATGCAACCAGATGTGTGCAGGATA...GACCAATCTCTGTGACTCGCTTAGCTGAAACCTAAGGCAACATTTCCGAAGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CCA 90 bp CCTGAGGCTTTGTGGAATATACCAAAAACAGACGTTTGTGTGCTCAGGCTCGCCAGGCATTTGTTGATCTaGTTTTCAAATCCCACTGTG +
Preference number: 4 (lower is better)
Translates to: PEALWNIPKTDVCVLRLARHLLI*FSNPTV
Trigger: CACAGTGGGATTTGAAAACCAGATCAACAAATGCCT...GGCGAGCCTGAGCACACAAACGTCTGTTTTTGGTATATTCCACAAAGCCTCAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CCA 90 bp CCCCTGAGGCTTTGTGGAATATACCAAAAACAGACGTTTGTGTGCTCAGGCTCGAGGCATTTGTTGATCTaGTTTTCAAATCCCACTGTG +
Preference number: 4 (lower is better)
Translates to: PLRLCGIYQKQTFVCSGSRHLLI*FSNPTV
Trigger: CACAGTGGGATTTGAAAACCAGATCAACAAATGCCT...CGAGCCTGAGCACACAAACGTCTGTTTTTGGTATATTCCACAAAGCCTCAGGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CCA 90 bp ACAATCATTGAAATCATGACACATAGTCTCCCCCTCCCACCACCAAGGTCAGACACCCCTGAGGCTTTGTaGAATATACCAAAAACAGAC +
Preference number: 4 (lower is better)
Translates to: TIIEIMTHSLPLPPPRSDTPEAL*NIPKTD
Trigger: GTCTGTTTTTGGTATATTCCACAAAGCCTCAGGGGT...GTCTGACCTTGGTGGTGGGAGGGGGAGACTATGTGTCATGATTTCAATGATTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CCA 90 bp CGGAAATGTTGCCTTAGGTTTCAGCTAAGCGAGTCACAGAGATTGGTCATCAACAGTTGTTGGACAAGCTaGTTGGCAGCATGTTTAGCT +
Preference number: 4 (lower is better)
Translates to: RKCCLRFQLSESQRLVINSCWTS*LAACLA
Trigger: AGCTAAACATGCTGCCAACCAGCTTGTCCAACAACT...GTTGATGACCAATCTCTGTGACTCGCTTAGCTGAAACCTAAGGCAACATTTCCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CCA 90 bp CCCAAAGTCACAAAAGCAGTTTCATGTGGGTTCAGAGAGAATAATGACATTTCTAAAATGATGGAGACCTaGCCAGCAGGGAGGGAGGGA +
Preference number: 4 (lower is better)
Translates to: PKVTKAVSCGFRENNDISKMMET*PAGREG
Trigger: TCCCTCCCTCCCTGCTGGCCAGGTCTCCATCATTTT...AGAAATGTCATTATTCTCTCTGAACCCACATGAAACTGCTTTTGTGACTTTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486850.1
CDS-3UTR TCA 90 bp TCTTTAGAGTTGACTTTTATTGACTGCCTTCATCCAGTTTCCAAAATGATGGAGAGAAGCCGCAGATCTTaGGCCCCAGTTTTCTGGTGC +
Preference number: 4 (lower is better)
Translates to: SLELTFIDCLHPVSKMMERSRRS*APVFWC
Trigger: GCACCAGAAAACTGGGGCTCAAGATCTGCGGCTTCT...CTCCATCATTTTGGAAACTGGATGAAGGCAGTCAATAAAAGTCAACTCTAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000486850.1
CDS-3UTR TCA 90 bp ATAAACTCATGTTCTGCGAAGGATGATTACAGATCCTGGCCCAGTCTTTCTATCTCTTGCGGACATAGTTaGGGAGTATGTCCACCACTT +
Preference number: 4 (lower is better)
Translates to: INSCSAKDDYRSWPSLSISCGHS*GVCPPL
Trigger: AAGTGGTGGACATACTCCTCAACTATGTCCGCAAGA...GATAGAAAGACTGGGCCAGGATCTGTAATCATCCTTCGCAGAACATGAGTTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp CGGAAATGTTGCCTTAGGTTTCAGCTAAGCGAGTCACAGAGATTGGTCATCAACGTGTTATTTGTTCCATaGGGACAAACACTGGTGCAA +
Preference number: 4 (lower is better)
Translates to: RKCCLRFQLSESQRLVINVLFVP*GQTLVQ
Trigger: TTGCACCAGTGTTTGTCCTCATGGAACAAATAACAC...GTTGATGACCAATCTCTGTGACTCGCTTAGCTGAAACCTAAGGCAACATTTCCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp GGCATTCCCATAAACTCATGTTCTGCGAAGGATGATTACAGATCCTGGCCCAGTATCACCATCTTTACTTaGCCATCCAACTATCTCTCT +
Preference number: 4 (lower is better)
Translates to: GIPINSCSAKDDYRSWPSITIFT*PSNYLS
Trigger: AGAGAGATAGTTGGATGGTCAAGTAAAGATGGTGAT...ACTGGGCCAGGATCTGTAATCATCCTTCGCAGAACATGAGTTTATGGGAATGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp ATCTGCAATCTCTTGTATCGGATCAAAAGCTCCATAAACAGTCGTGCCAGCAGTATAGTGACTCTGTTCTaGGGTGAAGAGGACCAGTTT +
Preference number: 4 (lower is better)
Translates to: ICNLLYRIKSSINSRASSIVTLF*GEEDQF
Trigger: AAACTGGTCCTCTTCACCTCAGAACAGAGTCACTAT...ACTGCTGGCACGACTGTTTATGGAGCTTTTGATCCGATACAAGAGATTGCAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414527.6
CDS-3UTR TCA 90 bp CTTAGGTTTCAGCTAAGCGAGTCACAGAGATTGGTCATCAACTACTACAAAATTTGTGAGGGTTCCAGGTaGCTGAGTTGGCCCTTTCTA +
Preference number: 4 (lower is better)
Translates to: LRFQLSESQRLVINYYKICEGSR*LSWPFL
Trigger: TAGAAAGGGCCAACTCAGTCACCTGGAACCCTCACA...AATTTTGTAGTAGTTGATGACCAATCTCTGTGACTCGCTTAGCTGAAACCTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp ATAAACTCATGTTCTGCGAAGGATGATTACAGATCCTGGCCCAGTCTTTCTATCGTATACCCTTTTCCTTaGCGAGAATGGCAGAGCACT +
Preference number: 4 (lower is better)
Translates to: INSCSAKDDYRSWPSLSIVYPFP*REWQST
Trigger: AGTGCTCTGCCATTCTCGTCAAGGAAAAGGGTATAC...GATAGAAAGACTGGGCCAGGATCTGTAATCATCCTTCGCAGAACATGAGTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp GAACACCAGACGTACAGCCAGACAGAGAGCGTAAGAGAAGAGCAGATGCTATTTTATGTTTTCCCTCAATaGAATGGCCTGTGTGTTTCA +
Preference number: 4 (lower is better)
Translates to: EHQTYSQTESVREEQMLFYVFPQ*NGLCVS
Trigger: TGAAACACACAGGCCATTTCATTGAGGGAAAACATA...AAATAGCATCTGCTCTTCTCTTACGCTCTCTGTCTGGCTGTACGTCTGGTGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp AGAACACCAGACGTACAGCCAGACAGAGAGCGTAAGAGAAGAGCAGATGCTATTTATGTTTTCCCTCAATaGAATGGCCTGTGTGTTTCA +
Preference number: 4 (lower is better)
Translates to: RTPDVQPDRERKRRADAIYVFPQ*NGLCVS
Trigger: TGAAACACACAGGCCATTTCATTGAGGGAAAACATA...AATAGCATCTGCTCTTCTCTTACGCTCTCTGTCTGGCTGTACGTCTGGTGTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp CCTGAGGCTTTGTGGAATATACCAAAAACAGACGTTTGTGTGCTCAGGCTCGCCCTAAAACGCACAGTGTaGATTTCCCTTCTTCAAAAA +
Preference number: 4 (lower is better)
Translates to: PEALWNIPKTDVCVLRLALKRTV*ISLLQK
Trigger: TTTTTGAAGAAGGGAAATTCACACTGTGCGTTTTAG...GGCGAGCCTGAGCACACAAACGTCTGTTTTTGGTATATTCCACAAAGCCTCAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000493875.5
ENST00000625689.2
CDS-3UTR GCA 90 bp CTCTTGTATCGGATCAAAAGCTCCATAAACAGTCGTGCCAGCAGTTGCATTGACCAGGCAGCATCGACATaGAACCAAAGGTTATATTTC +
Preference number: 4 (lower is better)
Translates to: LLYRIKSSINSRASSCIDQAAST*NQRLYF
Trigger: GAAATATAACCTTTGGTTGCATGTCGATGCTGCCTG...GTCAATGCAACTGCTGGCACGACTGTTTATGGAGCTTTTGATCCGATACAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414527.6
CDS-3UTR GCA 90 bp CCCTTTCATTGCACTTTATCAAAATCACATTGTCAGTTCCAAAGCCAAGTGCAGTTGAGTTTATGGCGGTaGTTCCTGGACATGAGCAGC +
Preference number: 4 (lower is better)
Translates to: PFHCTLSKSHCQFQSQVQLSLWR*FLDMSS
Trigger: GCTGCTCATGTCCAGGAAGCACCGCCATAAACTCAA...CTGCACTTGGCTTTGGAACTGACAATGTGATTTTGATAAAGTGCAATGAAAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414527.6
CDS-3UTR GCA 90 bp ATTGACTGCCTTCATCCAGTTTCCAAAATGATGGAGACCTGGCCAGCAGGGAGGTTGACTTTTATTGACTaGCTTCATCCAGTTTCCAAA +
Preference number: 4 (lower is better)
Translates to: IDCLHPVSKMMETWPAGRLTFID*LHPVSK
Trigger: TTTGGAAACTGGATGAAGGCAGTCAATAAAAGTCAA...CCTCCCTGCTGGCCAGGTCTCCATCATTTTGGAAACTGGATGAAGGCAGTCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486850.1
CDS-3UTR CCA 90 bp AAACCATGTGTGCAGTTACCATCACCTCTGGAGGTCACAATCATGCTTTGGTTCAGTTACCATCACCTCTaGAGGTCACAATCATGCTTT +
Preference number: 4 (lower is better)
Translates to: KPCVQLPSPLEVTIMLWFSYHHL*RSQSCF
Trigger: AAAGCATGATTGTGACCTCCAGAGGTGATGGTAACT...GAACCAAAGCATGATTGTGACCTCCAGAGGTGATGGTAACTGCACACATGGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344257.9
ENST00000375272.5
CDS-3UTR CCA 90 bp ACAATCATTGAAATCATGACACATAGTCTCCCCCTCCCACCACCAAGGTCAGACAGGCATTTGTTGATCTaGTTTTCAAATCCCACTGTG +
Preference number: 4 (lower is better)
Translates to: TIIEIMTHSLPLPPPRSDRHLLI*FSNPTV
Trigger: CACAGTGGGATTTGAAAACCAGATCAACAAATGCCT...GTCTGACCTTGGTGGTGGGAGGGGGAGACTATGTGTCATGATTTCAATGATTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CCA 90 bp GAACACCAGACGTACAGCCAGACAGAGAGCGTAAGAGAAGAGCAGATGCTATTTAGGCATTTGTTGATCTaGTTTTCAAATCCCACTGTG +
Preference number: 4 (lower is better)
Translates to: EHQTYSQTESVREEQMLFRHLLI*FSNPTV
Trigger: CACAGTGGGATTTGAAAACCAGATCAACAAATGCCT...AAATAGCATCTGCTCTTCTCTTACGCTCTCTGTCTGGCTGTACGTCTGGTGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CCA 90 bp CGGAAATGTTGCCTTAGGTTTCAGCTAAGCGAGTCACAGAGATTGGTCATCAACACCCCTGAGGCTTTGTaGAATATACCAAAAACAGAC +
Preference number: 4 (lower is better)
Translates to: RKCCLRFQLSESQRLVINTPEAL*NIPKTD
Trigger: GTCTGTTTTTGGTATATTCCACAAAGCCTCAGGGGT...GTTGATGACCAATCTCTGTGACTCGCTTAGCTGAAACCTAAGGCAACATTTCCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CCA 90 bp GCTTTGTGGAATATACCAAAAACAGACGTTTGTGTGCTCAGGCTCGCCATTGAAGATGATTACAGATCCTaGCCCAGTCTTTCTATCTCC +
Preference number: 4 (lower is better)
Translates to: ALWNIPKTDVCVLRLAIEDDYRS*PSLSIS
Trigger: GGAGATAGAAAGACTGGGCCAGGATCTGTAATCATC...TTCAATGGCGAGCCTGAGCACACAAACGTCTGTTTTTGGTATATTCCACAAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CCA 90 bp GCTTTGTGGAATATACCAAAAACAGACGTTTGTGTGCTCAGGCTCGCCATTGAAAGTTGTTGGACAAGCTaGTTGGCAGCATGTTTAGCT +
Preference number: 4 (lower is better)
Translates to: ALWNIPKTDVCVLRLAIESCWTS*LAACLA
Trigger: AGCTAAACATGCTGCCAACCAGCTTGTCCAACAACT...TTCAATGGCGAGCCTGAGCACACAAACGTCTGTTTTTGGTATATTCCACAAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CCA 90 bp CTTAGGTTTCAGCTAAGCGAGTCACAGAGATTGGTCATCAACTACTACAAAATTGTGCCTGACCGCCTCTaGAGCTTTATAGGGCGATTA +
Preference number: 4 (lower is better)
Translates to: LRFQLSESQRLVINYYKIVPDRL*SFIGRL
Trigger: TAATCGCCCTATAAAGCTCCAGAGGCGGTCAGGCAC...AATTTTGTAGTAGTTGATGACCAATCTCTGTGACTCGCTTAGCTGAAACCTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000625689.2
CDS-3UTR CCA 90 bp GCTTTGTGGAATATACCAAAAACAGACGTTTGTGTGCTCAGGCTCGCCATTGAATGTACATGTTGGATATaGCGCCCCATGTTGGTATTG +
Preference number: 4 (lower is better)
Translates to: ALWNIPKTDVCVLRLAIECTCWI*RPMLVL
Trigger: CAATACCAACATGGGGCGCCATATCCAACATGTACA...TTCAATGGCGAGCCTGAGCACACAAACGTCTGTTTTTGGTATATTCCACAAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000414527.6
CDS-3UTR TCA 90 bp TTTGTGTGCTCAGGCTCGCCATTGAAAACCATCTCAAATTCTTCTCTGTTTTTACAGTGGAGAGCTGGTTaGAAAATCGAGGATGACCTG +
Preference number: 4 (lower is better)
Translates to: FVCSGSPLKTISNSSLFLQWRAG*KIEDDL
Trigger: CAGGTCATCCTCGATTTTTCAACCAGCTCTCCACTG...TAAAAACAGAGAAGAATTTGAGATGGTTTTCAATGGCGAGCCTGAGCACACAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp CGGAAATGTTGCCTTAGGTTTCAGCTAAGCGAGTCACAGAGATTGGTCATCAACATCACCATCTTTACTTaGCCATCCAACTATCTCTCT +
Preference number: 4 (lower is better)
Translates to: RKCCLRFQLSESQRLVINITIFT*PSNYLS
Trigger: AGAGAGATAGTTGGATGGTCAAGTAAAGATGGTGAT...GTTGATGACCAATCTCTGTGACTCGCTTAGCTGAAACCTAAGGCAACATTTCCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp GCTTTGTGGAATATACCAAAAACAGACGTTTGTGTGCTCAGGCTCGCCATTGAAGTTCCAGGCATTTGTTaGTCTGGTTTTCAAATCCCA +
Preference number: 4 (lower is better)
Translates to: ALWNIPKTDVCVLRLAIEVPGIC*SGFQIP
Trigger: TGGGATTTGAAAACCAGATCAACAAATGCCTGGAAC...TTCAATGGCGAGCCTGAGCACACAAACGTCTGTTTTTGGTATATTCCACAAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp GGTCTTCGGAAATGTTGCCTTAGGTTTCAGCTAAGCGAGTCACAGAGATTGGTCCTAAAACGCACAGTGTaGATTTCCCTTCTTCAAAAA +
Preference number: 4 (lower is better)
Translates to: GLRKCCLRFQLSESQRLVLKRTV*ISLLQK
Trigger: TTTTTGAAGAAGGGAAATTCACACTGTGCGTTTTAG...GACCAATCTCTGTGACTCGCTTAGCTGAAACCTAAGGCAACATTTCCGAAGACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp GCTTTGTGGAATATACCAAAAACAGACGTTTGTGTGCTCAGGCTCGCCATTGAAATGATGCATGTTTACTaGATAGTTGGGATGCCACGT +
Preference number: 4 (lower is better)
Translates to: ALWNIPKTDVCVLRLAIEMMHVY*IVGMPR
Trigger: ACGTGGCATCCCAACTATTCAGTAAACATGCATCAT...TTCAATGGCGAGCCTGAGCACACAAACGTCTGTTTTTGGTATATTCCACAAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000493875.5
ENST00000625689.2
CDS-3UTR GCA 90 bp CCCAAAGTCACAAAAGCAGTTTCATGTGGGTTCAGAGAGAATAATGACATTTCTAGGCTGTTGGTCCTTTaGAAGAAGCCGCAGATCTTG +
Preference number: 4 (lower is better)
Translates to: PKVTKAVSCGFRENNDISRLLVL*KKPQIL
Trigger: CAAGATCTGCGGCTTCTTGCAAAGGACCAACAGCCT...AGAAATGTCATTATTCTCTCTGAACCCACATGAAACTGCTTTTGTGACTTTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486850.1
CDS-3UTR GCA 90 bp TTTGTGTGCTCAGGCTCGCCATTGAAAACCATCTCAAATTCTTCTCTGTTTTTAAGGCTGTTGGTCCTTTaGAAGAAGCCGCAGATCTTG +
Preference number: 4 (lower is better)
Translates to: FVCSGSPLKTISNSSLFLRLLVL*KKPQIL
Trigger: CAAGATCTGCGGCTTCTTGCAAAGGACCAACAGCCT...TAAAAACAGAGAAGAATTTGAGATGGTTTTCAATGGCGAGCCTGAGCACACAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR GCA 90 bp CTTAGGTTTCAGCTAAGCGAGTCACAGAGATTGGTCATCAACTACTACAAAATTAGGTTCTTGGAGGATTaGCTCTCCTTGAAGGCACTC +
Preference number: 4 (lower is better)
Translates to: LRFQLSESQRLVINYYKIRFLED*LSLKAL
Trigger: GAGTGCCTTCAAGGAGAGGCAATCCTCCAAGAACCT...AATTTTGTAGTAGTTGATGACCAATCTCTGTGACTCGCTTAGCTGAAACCTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR GCA 90 bp GGAGACATCATACTGCTTGTCTGGCTGGAAGAGGTATCCTGCACACATCTGGTTGAGGACAAACACTGGTaGAATTTCATATGTAAACAT +
Preference number: 4 (lower is better)
Translates to: GDIILLVWLEEVSCTHLVEDKHW*NFICKH
Trigger: ATGTTTACATATGAAATTGCACCAGTGTTTGTCCTC...AACCAGATGTGTGCAGGATACCTCTTCCAGCCAGACAAGCAGTATGATGTCTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493875.5
ENST00000625689.2
CDS-3UTR GCA 90 bp TCATCCATCATCACTTCAGGTGGAGAAACGCTGACAGTGAGGTCGATTCTCACCTTTCTCACATATATCTaGAATCTCTTGTATCGGATC +
Preference number: 4 (lower is better)
Translates to: SSIITSGGETLTVRSILTFLTYI*NLLYRI
Trigger: GATCCGATACAAGAGATTGCAGATATATGTGAGAAA...GGTGAGAATCGACCTCACTGTCAGCGTTTCTCCACCTGAAGTGATGATGGATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR GCA 90 bp ATAAACTCATGTTCTGCGAAGGATGATTACAGATCCTGGCCCAGTCTTTCTATCTTGGAGCGGGAAACATaGCGTGATCTATTACTAAGC +
Preference number: 4 (lower is better)
Translates to: INSCSAKDDYRSWPSLSILERET*RDLLLS
Trigger: GCTTAGTAATAGATCACGGCATGTTTCCCGCTCCAA...GATAGAAAGACTGGGCCAGGATCTGTAATCATCCTTCGCAGAACATGAGTTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CCA 90 bp CCAAAGTCACAAAAGCAGTTTCATGTGGGTTCAGAGAGAATAATGACATTTCTTTCTCTTCCAGGCTGTTaGTCCTTTGCAAGAAGCCGC +
Preference number: 4 (lower is better)
Translates to: PKSQKQFHVGSERIMTFLSLPGC*SFARSR
Trigger: GCGGCTTCTTGCAAAGGACCAACAGCCTGGAAGAGA...AAGAAATGTCATTATTCTCTCTGAACCCACATGAAACTGCTTTTGTGACTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486850.1
CDS-3UTR CCA 90 bp CTTAGGTTTCAGCTAAGCGAGTCACAGAGATTGGTCATCAACTACTACAAAATTTTCCAGCAACTGGTGTaGGTGATGAAAGTCCAGCAC +
Preference number: 4 (lower is better)
Translates to: LRFQLSESQRLVINYYKIFQQLV*VMKVQH
Trigger: GTGCTGGACTTTCATCACCCACACCAGTTGCTGGAA...AATTTTGTAGTAGTTGATGACCAATCTCTGTGACTCGCTTAGCTGAAACCTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CCA 90 bp CTTAGGTTTCAGCTAAGCGAGTCACAGAGATTGGTCATCAACTACTACAAAATTATGCCGTTGAGTTTATaGCGGTGCTTCCTGGACATG +
Preference number: 4 (lower is better)
Translates to: LRFQLSESQRLVINYYKIMPLSL*RCFLDM
Trigger: CATGTCCAGGAAGCACCGCCATAAACTCAACGGCAT...AATTTTGTAGTAGTTGATGACCAATCTCTGTGACTCGCTTAGCTGAAACCTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CCA 90 bp CCCTTTCATTGCACTTTATCAAAATCACATTGTCAGTTCCAAAGCCAAGTGCAGATCATACTGCTTGTCTaGCTGGAAGAGGTATCCTGC +
Preference number: 4 (lower is better)
Translates to: PFHCTLSKSHCQFQSQVQIILLV*LEEVSC
Trigger: GCAGGATACCTCTTCCAGCCAGACAAGCAGTATGAT...CTGCACTTGGCTTTGGAACTGACAATGTGATTTTGATAAAGTGCAATGAAAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414527.6
CDS-3UTR CCA 90 bp ATAAACTCATGTTCTGCGAAGGATGATTACAGATCCTGGCCCAGTCTTTCTATCGATGATTACAGATCCTaGCCCAGTCTTTCTATCTCC +
Preference number: 4 (lower is better)
Translates to: INSCSAKDDYRSWPSLSIDDYRS*PSLSIS
Trigger: GGAGATAGAAAGACTGGGCCAGGATCTGTAATCATC...GATAGAAAGACTGGGCCAGGATCTGTAATCATCCTTCGCAGAACATGAGTTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CCA 90 bp TCATACTGCTTGTCTGGCTGGAAGAGGTATCCTGCACACATCTGGTTGCATCCTGACGCCTCTTTAACATaGTACATCTCTGAATATAAA +
Preference number: 4 (lower is better)
Translates to: SYCLSGWKRYPAHIWLHPDASLT*YISEYK
Trigger: TTTATATTCAGAGATGTACCATGTTAAAGAGGCGTC...AGGATGCAACCAGATGTGTGCAGGATACCTCTTCCAGCCAGACAAGCAGTATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493875.5
ENST00000625689.2
3UTR CAA 72 bp AGATCTAGTTATTATCCAACAGTTGCTAGAAAAGCATaGAGAACACCAGACGTACAGCCAGACAGAGAGCGT +
Preference number: 4 (lower is better)
Translates to: RSSYYPTVARKA*RTPDVQPDRER
Trigger: ACGCTCTCTGTCTGGCTGTACGTCTGGTGTTCTCAATGCTTTTCTAGCAACTGTTGGATAATAACTAGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp CTTAGGTTTCAGCTAAGCGAGTCACAGAGATTGGTCATCAACTACTACAAAATTTCTTGCGGACATAGTTaGGGAGTATGTCCACCACTT +
Preference number: 4 (lower is better)
Translates to: LRFQLSESQRLVINYYKISCGHS*GVCPPL
Trigger: AAGTGGTGGACATACTCCTCAACTATGTCCGCAAGA...AATTTTGTAGTAGTTGATGACCAATCTCTGTGACTCGCTTAGCTGAAACCTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp ATAAACTCATGTTCTGCGAAGGATGATTACAGATCCTGGCCCAGTCTTTCTATCGTGTTATTTGTTCCATaGGGACAAACACTGGTGCAA +
Preference number: 4 (lower is better)
Translates to: INSCSAKDDYRSWPSLSIVLFVP*GQTLVQ
Trigger: TTGCACCAGTGTTTGTCCTCATGGAACAAATAACAC...GATAGAAAGACTGGGCCAGGATCTGTAATCATCCTTCGCAGAACATGAGTTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp CTTAGGTTTCAGCTAAGCGAGTCACAGAGATTGGTCATCAACTACTACAAAATTCCATCATCAGGGCTTTaGTTTTTGGAGCCACCTTGT +
Preference number: 4 (lower is better)
Translates to: LRFQLSESQRLVINYYKIPSSGL*FLEPPC
Trigger: ACAAGGTGGCTCCAAAAATCAAAGCCCTGATGATGG...AATTTTGTAGTAGTTGATGACCAATCTCTGTGACTCGCTTAGCTGAAACCTAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp CTTAGGTTTCAGCTAAGCGAGTCACAGAGATTGGTCATCAACTACTACAAAATTCTGCTGAAGGTAAAGTaGATTCTCTTGGAGCGGGAA +
Preference number: 4 (lower is better)
Translates to: LRFQLSESQRLVINYYKILLKVK*ILLERE
Trigger: TTCCCGCTCCAAGAGAATTCACTTTACCTTCAGCAG...AATTTTGTAGTAGTTGATGACCAATCTCTGTGACTCGCTTAGCTGAAACCTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp TCTTTAGAGTTGACTTTTATTGACTGCCTTCATCCAGTTTCCAAAATGATGGAGATCCAGTTTCCAAAATaGTGGAGACCTGGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: SLELTFIDCLHPVSKMMEIQFPK*WRPGQQ
Trigger: CTGCTGGCCAGGTCTCCATCATTTTGGAAACTGGAT...CTCCATCATTTTGGAAACTGGATGAAGGCAGTCAATAAAAGTCAACTCTAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000486850.1
CDS-3UTR GCA 90 bp CTTAGGTTTCAGCTAAGCGAGTCACAGAGATTGGTCATCAACTACTACAAAATTACTTCAAGGTGTCTCTaGAGTCAACCAGGATCTGCT +
Preference number: 4 (lower is better)
Translates to: LRFQLSESQRLVINYYKITSRCL*SQPGSA
Trigger: AGCAGATCCTGGTTGACTGCAGAGACACCTTGAAGT...AATTTTGTAGTAGTTGATGACCAATCTCTGTGACTCGCTTAGCTGAAACCTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR GCA 90 bp CTGAGGCTTTGTGGAATATACCAAAAACAGACGTTTGTGTGCTCAGGCTCGCCAGAGGACAAACACTGGTaGAATTTCATATGTAAACAT +
Preference number: 4 (lower is better)
Translates to: LRLCGIYQKQTFVCSGSPEDKHW*NFICKH
Trigger: ATGTTTACATATGAAATTGCACCAGTGTTTGTCCTC...TGGCGAGCCTGAGCACACAAACGTCTGTTTTTGGTATATTCCACAAAGCCTCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000493875.5
ENST00000625689.2
CDS-3UTR GCA 90 bp AGAACACCAGACGTACAGCCAGACAGAGAGCGTAAGAGAAGAGCAGATGCTATTTTTCTCACATATATCTaGAATCTCTTGTATCGGATC +
Preference number: 4 (lower is better)
Translates to: RTPDVQPDRERKRRADAIFLTYI*NLLYRI
Trigger: GATCCGATACAAGAGATTGCAGATATATGTGAGAAA...AATAGCATCTGCTCTTCTCTTACGCTCTCTGTCTGGCTGTACGTCTGGTGTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CCA 90 bp ATAAACTCATGTTCTGCGAAGGATGATTACAGATCCTGGCCCAGTCTTTCTATCACCCCTGAGGCTTTGTaGAATATACCAAAAACAGAC +
Preference number: 4 (lower is better)
Translates to: INSCSAKDDYRSWPSLSITPEAL*NIPKTD
Trigger: GTCTGTTTTTGGTATATTCCACAAAGCCTCAGGGGT...GATAGAAAGACTGGGCCAGGATCTGTAATCATCCTTCGCAGAACATGAGTTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CCA 90 bp ACAATCATTGAAATCATGACACATAGTCTCCCCCTCCCACCACCAAGGTCAGACGACGCCTCTTTAACATaGTACATCTCTGAATATAAA +
Preference number: 4 (lower is better)
Translates to: TIIEIMTHSLPLPPPRSDDASLT*YISEYK
Trigger: TTTATATTCAGAGATGTACCATGTTAAAGAGGCGTC...GTCTGACCTTGGTGGTGGGAGGGGGAGACTATGTGTCATGATTTCAATGATTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR TCA 90 bp CTTAGGTTTCAGCTAAGCGAGTCACAGAGATTGGTCATCAACTACTACAAAATTCCTGGTCACTTTATCTaGGATCTTCAGAAGGTCTTC +
Preference number: 4 (lower is better)
Translates to: LRFQLSESQRLVINYYKIPGHFI*DLQKVF
Trigger: GAAGACCTTCTGAAGATCTCAGATAAAGTGACCAGG...AATTTTGTAGTAGTTGATGACCAATCTCTGTGACTCGCTTAGCTGAAACCTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR GCA 90 bp CGGAAATGTTGCCTTAGGTTTCAGCTAAGCGAGTCACAGAGATTGGTCATCAACTTTCTCACATATATCTaGAATCTCTTGTATCGGATC +
Preference number: 4 (lower is better)
Translates to: RKCCLRFQLSESQRLVINFLTYI*NLLYRI
Trigger: GATCCGATACAAGAGATTGCAGATATATGTGAGAAA...GTTGATGACCAATCTCTGTGACTCGCTTAGCTGAAACCTAAGGCAACATTTCCG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR GCA 90 bp TTTGTGTGCTCAGGCTCGCCATTGAAAACCATCTCAAATTCTTCTCTGTTTTTAGGTCTTCGGAAATGTTaGCTTAGGTTTCAGCTAAGC +
Preference number: 4 (lower is better)
Translates to: FVCSGSPLKTISNSSLFLGLRKC*LRFQLS
Trigger: GCTTAGCTGAAACCTAAGGCAACATTTCCGAAGACC...TAAAAACAGAGAAGAATTTGAGATGGTTTTCAATGGCGAGCCTGAGCACACAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CCA 90 bp TTTGTGTGCTCAGGCTCGCCATTGAAAACCATCTCAAATTCTTCTCTGTTTTTATGTACATGTTGGATATaGCGCCCCCAGGAGAAAATA +
Preference number: 4 (lower is better)
Translates to: FVCSGSPLKTISNSSLFLCTCWI*RPQEKI
Trigger: TATTTTCTCCTGGGGGCGCCATATCCAACATGTACA...TAAAAACAGAGAAGAATTTGAGATGGTTTTCAATGGCGAGCCTGAGCACACAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CCA 90 bp TTTGTGTGCTCAGGCTCGCCATTGAAAACCATCTCAAATTCTTCTCTGTTTTTAACCCCTGAGGCTTTGTaGAATATACCAAAAACAGAC +
Preference number: 4 (lower is better)
Translates to: FVCSGSPLKTISNSSLFLTPEAL*NIPKTD
Trigger: GTCTGTTTTTGGTATATTCCACAAAGCCTCAGGGGT...TAAAAACAGAGAAGAATTTGAGATGGTTTTCAATGGCGAGCCTGAGCACACAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
3UTR CAA 72 bp TGTTGCCTTAGGTTTCAGCTAAGCGAGTCACAGAGATaGGTCATCAACTACTACAAAATTACAGGAGATCTA +
Preference number: 4 (lower is better)
Translates to: CCLRFQLSESQR*VINYYKITGDL
Trigger: TAGATCTCCTGTAATTTTGTAGTAGTTGATGACCAATCTCTGTGACTCGCTTAGCTGAAACCTAAGGCAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
3UTR CAA 72 bp CCAAAGGTTATATTTCTCACATATATCTGCAATCTCTaGTATCGGATCAAAAGCTCCATAAACAGTCGTGCC +
Preference number: 4 (lower is better)
Translates to: PKVIFLTYICNL*YRIKSSINSRA
Trigger: GGCACGACTGTTTATGGAGCTTTTGATCCGATACAAGAGATTGCAGATATATGTGAGAAATATAACCTTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414527.6
CDS-3UTR TCA 90 bp CCAAAGTCACAAAAGCAGTTTCATGTGGGTTCAGAGAGAATAATGACATTTCTTAGAGTTGACTTTTATTaGCTGCCTTCATCCAGTTTC +
Preference number: 4 (lower is better)
Translates to: PKSQKQFHVGSERIMTFLRVDFY*LPSSSF
Trigger: GAAACTGGATGAAGGCAGTCAATAAAAGTCAACTCT...AAGAAATGTCATTATTCTCTCTGAACCCACATGAAACTGCTTTTGTGACTTTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486850.1
CDS-3UTR GCA 90 bp CTTAGGTTTCAGCTAAGCGAGTCACAGAGATTGGTCATCAACTACTACAAAATTGAGGACAAACACTGGTaGAATTTCATATGTAAACAT +
Preference number: 4 (lower is better)
Translates to: LRFQLSESQRLVINYYKIEDKHW*NFICKH
Trigger: ATGTTTACATATGAAATTGCACCAGTGTTTGTCCTC...AATTTTGTAGTAGTTGATGACCAATCTCTGTGACTCGCTTAGCTGAAACCTAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS GCA 90 bp TGGGGCGCAGGGAGCGTAGCCCTGGGCCGCTCTCGAGTCTGGCGGTaGATCGGCGCGACCTGGAGTGAAGCGCCGAGACGAGGCGGGGTC +
Preference number: 5 (lower is better)
Translates to: WGAGSVALGRSRVWR*IGATWSEAPRRGGV
Trigger: GACCCCGCCTCGTCTCGGCGCTTCACTCCAGGTCGCGCCGATGCACCGCCAGACTCGAGAGCGGCCCAGGGCTACGCTCCCTGCGCCCCA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493875.5
CDS GCA 90 bp CGTTGCTCGCGGGGGCAGCTAGTCGGCGGAGCGGCGGGGCTCCTCTaGAGGTGCCTGACCGCCTCTGGAGCTGGCCACAGCTACCCAGTG +
Preference number: 5 (lower is better)
Translates to: RCSRGQLVGGAAGLL*RCLTASGAGHSYPV
Trigger: CACTGGGTAGCTGTGGCCAGCTCCAGAGGCGGTCAGGCACCTGCAGAGGAGCCCCGCCGCTCCGCCGACTAGCTGCCCCCGCGAGCAACG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445006.5
CDS CCA 90 bp CGGTACTGGGGCGCAGGGAGCGTAGCCCTGGGCCGCTCTCGAGTCTaGCGGTGCATCGGCGCGACCTGGAGTGAAGCGCCGAGACGAGGC +
Preference number: 5 (lower is better)
Translates to: RYWGAGSVALGRSRV*RCIGATWSEAPRRG
Trigger: GCCTCGTCTCGGCGCTTCACTCCAGGTCGCGCCGATGCACCGCCAGACTCGAGAGCGGCCCAGGGCTACGCTCCCTGCGCCCCAGTACCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493875.5
CDS GCA 90 bp AGGCTCGGCTCTGCGACAGCGAGCCGGGCACTCCCGCCTTTCCTCTaGACAGCGCCCAGCGATCCGCTCGGCTCGGCCCTGACAGGCGTA +
Preference number: 5 (lower is better)
Translates to: RLGSATASRALPPFL*TAPSDPLGSALTGV
Trigger: TACGCCTGTCAGGGCCGAGCCGAGCGGATCGCTGGGCGCTGTGCAGAGGAAAGGCGGGAGTGCCCGGCTCGCTGTCGCAGAGCCGAGCCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344257.9
ENST00000358196.8
ENST00000445006.5
ENST00000625689.2
CDS GCA 90 bp CACCTCGGCTCTGCGACAGCGAGCCGGGCACTCCCGCCTTTCCTCTaGACAGCGCCCAGCGATCCGCTCGGCTCGGCCCTGACAGGCGTA +
Preference number: 5 (lower is better)
Translates to: HLGSATASRALPPFL*TAPSDPLGSALTGV
Trigger: TACGCCTGTCAGGGCCGAGCCGAGCGGATCGCTGGGCGCTGTGCAGAGGAAAGGCGGGAGTGCCCGGCTCGCTGTCGCAGAGCCGAGGTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375272.5
CDS GCA 90 bp CGGCTCGGCCCTGACAGGCGTAATCTGCCCGGCGTCACCTCCAGCTaGTTCCTCGTTCTCGCTAGTTCCCTCTCGCACGCGAGCGCCAGG +
Preference number: 5 (lower is better)
Translates to: RLGPDRRNLPGVTSS*FLVLASSLSHASAR
Trigger: CCTGGCGCTCGCGTGCGAGAGGGAACTAGCGAGAACGAGGAAGCAGCTGGAGGTGACGCCGGGCAGATTACGCCTGTCAGGGCCGAGCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358196.8
ENST00000375272.5
ENST00000445006.5
ENST00000625689.2
CDS GCA 90 bp ACAGCGCCCAGCGATCCGCTCGGCTCGGCCCTGACAGGCGTAATCTaGCCGGCGTCACCTCCAGCTGCTTCCTCGTTCTCGCTAGTTCCC +
Preference number: 5 (lower is better)
Translates to: TAPSDPLGSALTGVI*PASPPAASSFSLVP
Trigger: GGGAACTAGCGAGAACGAGGAAGCAGCTGGAGGTGACGCCGGGCAGATTACGCCTGTCAGGGCCGAGCCGAGCGGATCGCTGGGCGCTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344257.9
ENST00000358196.8
ENST00000375272.5
ENST00000445006.5
ENST00000625689.2
CDS GCA 90 bp TCCGGCGCAGAAACAGGCGTTCCTAGTAGCGCCTTCGGCTGCTGCTaGCCAGGCGCCCTTTGGAGGGACAGGCGCTCGCAGCATGGAAGC +
Preference number: 5 (lower is better)
Translates to: SGAETGVPSSAFGCC*PGALWRDRRSQHGS
Trigger: GCTTCCATGCTGCGAGCGCCTGTCCCTCCAAAGGGCGCCTGGGCAGCAGCAGCCGAAGGCGCTACTAGGAACGCCTGTTTCTGCGCCGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455008.5
CDS GCA 90 bp TGGTCCGGCGCAGAAACAGGCGTTCCTAGTAGCGCCTTCGGCTGCTaGTGCCCAGGCGCCCTTTGGAGGGACAGGCGCTCGCAGCATGGA +
Preference number: 5 (lower is better)
Translates to: WSGAETGVPSSAFGC*CPGALWRDRRSQHG
Trigger: TCCATGCTGCGAGCGCCTGTCCCTCCAAAGGGCGCCTGGGCAGCAGCAGCCGAAGGCGCTACTAGGAACGCCTGTTTCTGCGCCGGACCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455008.5
CDS GCA 90 bp GACTGGTCCGGCGCAGAAACAGGCGTTCCTAGTAGCGCCTTCGGCTaGTGCTGCCCAGGCGCCCTTTGGAGGGACAGGCGCTCGCAGCAT +
Preference number: 5 (lower is better)
Translates to: DWSGAETGVPSSAFG*CCPGALWRDRRSQH
Trigger: ATGCTGCGAGCGCCTGTCCCTCCAAAGGGCGCCTGGGCAGCAGCAGCCGAAGGCGCTACTAGGAACGCCTGTTTCTGCGCCGGACCAGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455008.5
CDS TCA 90 bp CATACTCCCTTCCTGCTCCTGGCTTCAAATATGGAACGGTGTCTCTaGGAGGCGGGGCACCCGGCGCCCCTCCGGGCCCGTAAGCGACCC +
Preference number: 5 (lower is better)
Translates to: HTPFLLLASNMERCL*EAGHPAPLRARKRP
Trigger: GGGTCGCTTACGGGCCCGGAGGGGCGCCGGGTGCCCCGCCTCTCAGAGACACCGTTCCATATTTGAAGCCAGGAGCAGGAAGGGAGTATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485013.1
CDS CCA 90 bp GGTATTGGGGTCCGCTCCCGCGTTCGAGGAGGTTGCGGACGAAGATaGGGTCGAAGACGCCATCAGCTCGGTCGTCCCGGGGCCTCTACT +
Preference number: 5 (lower is better)
Translates to: GIGVRSRVRGGCGRR*GRRRHQLGRPGAST
Trigger: AGTAGAGGCCCCGGGACGACCGAGCTGATGGCGTCTTCGACCCCATCTTCGTCCGCAACCTCCTCGAACGCGGGAGCGGACCCCAATACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000344257.9
ENST00000358196.8
ENST00000375272.5
ENST00000414527.6
ENST00000445006.5
ENST00000454603.5
ENST00000455008.5
ENST00000456864.5
ENST00000493875.5
ENST00000625689.2
CDS GCA 90 bp GCGCAGGTTAGTGGTATTGGGGTCCGCTCCCGCGTTCGAGGAGGTTaGGGACGAAGATGGGGTCGAAGACGCCATCAGCTCGGTCGTCCC +
Preference number: 5 (lower is better)
Translates to: AQVSGIGVRSRVRGG*GRRWGRRRHQLGRP
Trigger: GGGACGACCGAGCTGATGGCGTCTTCGACCCCATCTTCGTCCGCAACCTCCTCGAACGCGGGAGCGGACCCCAATACCACTAACCTGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000344257.9
ENST00000358196.8
ENST00000375272.5
ENST00000414527.6
ENST00000445006.5
ENST00000454603.5
ENST00000455008.5
ENST00000456864.5
ENST00000493875.5
ENST00000625689.2
CDS CCA 90 bp GGCGTTCCTAGTAGCGCCTTCGGCTGCTGCTGCCCAGGCGCCCTTTaGAGGGACAGGCGCTCGCAGCATGGAAGCTCAAGGGAAAATCGC +
Preference number: 5 (lower is better)
Translates to: GVPSSAFGCCCPGAL*RDRRSQHGSSRENR
Trigger: GCGATTTTCCCTTGAGCTTCCATGCTGCGAGCGCCTGTCCCTCCAAAGGGCGCCTGGGCAGCAGCAGCCGAAGGCGCTACTAGGAACGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455008.5
CDS GCA 90 bp CCTCTACTGTCCAGAGTCCTCGACTGGTCCGGCGCAGAAACAGGCTaGAAAGAGAAGCGAGAGCTGTGCGGGGAGGACTTCCGGGGTCCT +
Preference number: 5 (lower is better)
Translates to: PLLSRVLDWSGAETG*KEKRELCGEDFRGP
Trigger: AGGACCCCGGAAGTCCTCCCCGCACAGCTCTCGCTTCTCTTTGCAGCCTGTTTCTGCGCCGGACCAGTCGAGGACTCTGGACAGTAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493875.5
CDS-3UTR CAA 90 bp CCTTGTCCCCTTGGGGCTGGTAGCCAACCATGGTCGTACCTGACTCCATCATCAACCATCCGGAAGAAGTaGGCCTTGTCCCCTTGGGGC +
Preference number: 5 (lower is better)
Translates to: PCPLGAGSQPWSYLTPSSTIRKK*ALSPWG
Trigger: GCCCCAAGGGGACAAGGCCAACTTCTTCCGGATGGT...TGATGATGGAGTCAGGTACGACCATGGTTGGCTACCAGCCCCAAGGGGACAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS TCA 90 bp CCAGGATCTGCTCCAGGGACTCGGGGTGGTCAGAGAGCTCCAAGTTaGAGCCCTCCATGCCTTCCAGCAACTGGTGTGGGTGATGAAAGT +
Preference number: 5 (lower is better)
Translates to: PGSAPGTRGGQRAPS*SPPCLPATGVGDES
Trigger: ACTTTCATCACCCACACCAGTTGCTGGAAGGCATGGAGGGCTTCAACTTGGAGCTCTCTGACCACCCCGAGTCCCTGGAGCAGATCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344257.9
ENST00000358196.8
ENST00000375272.5
ENST00000414527.6
ENST00000429023.1
ENST00000493875.5
ENST00000625689.2
CDS GCA 90 bp GTGCGAACCCCATACTTCAAGGTGTCTCTGCAGTCAACCAGGATCTaGTCCAGGGACTCGGGGTGGTCAGAGAGCTCCAAGTTGAAGCCC +
Preference number: 5 (lower is better)
Translates to: VRTPYFKVSLQSTRI*SRDSGWSESSKLKP
Trigger: GGGCTTCAACTTGGAGCTCTCTGACCACCCCGAGTCCCTGGAGCAGATCCTGGTTGACTGCAGAGACACCTTGAAGTATGGGGTTCGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344257.9
ENST00000358196.8
ENST00000375272.5
ENST00000414527.6
ENST00000429023.1
ENST00000493875.5
ENST00000625689.2
CDS CCA 90 bp TTCCAGGCTGTTGGTCCTTTGCAAGAAGCCTATGGCACAAGAAGCTaGTCAGAGAGAGTGCTGCAAACTGCCCAGCCCCTGAGGGTCAGC +
Preference number: 5 (lower is better)
Translates to: FQAVGPLQEAYGTRS*SERVLQTAQPLRVS
Trigger: GCTGACCCTCAGGGGCTGGGCAGTTTGCAGCACTCTCTCTGACCAGCTTCTTGTGCCATAGGCTTCTTGCAAAGGACCAACAGCCTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493270.1
CDS-3UTR CAA 90 bp CCATGTGTGCAGTTACCATCACCTCTGGAGGTCACAATCATGCTTTGGTTCTGCCCGCGTTCGAGGAGGTaGCGGACGAAGATGGGGTCG +
Preference number: 5 (lower is better)
Translates to: PCVQLPSPLEVTIMLWFCPRSRR*RTKMGS
Trigger: CGACCCCATCTTCGTCCGCAACCTCCTCGAACGCGG...GCAGAACCAAAGCATGATTGTGACCTCCAGAGGTGATGGTAACTGCACACATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344257.9
ENST00000375272.5
CDS-3UTR CAA 90 bp TGCAGTTACCATCACCTCTGGAGGTCACAATCATGCTTTGGTTCTGCTCTGAGCCCGCGTTCGAGGAGGTaGCGGACGAAGATGGGGTCG +
Preference number: 5 (lower is better)
Translates to: CSYHHLWRSQSCFGSALSPRSRR*RTKMGS
Trigger: CGACCCCATCTTCGTCCGCAACCTCCTCGAACGCGG...GCTCAGAGCAGAACCAAAGCATGATTGTGACCTCCAGAGGTGATGGTAACTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344257.9
ENST00000375272.5
CDS-3UTR CAA 90 bp CCCCTGAGGCTTTGTGGAATATACCAAAAACAGACGTTTGTGTGCTCAGGCTCGCCGCGTTCGAGGAGGTaGCGGACGAAGATGGGGTCG +
Preference number: 5 (lower is better)
Translates to: PLRLCGIYQKQTFVCSGSPRSRR*RTKMGS
Trigger: CGACCCCATCTTCGTCCGCAACCTCCTCGAACGCGG...CGAGCCTGAGCACACAAACGTCTGTTTTTGGTATATTCCACAAAGCCTCAGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp TTGGAGCCACCTTGTGTAGCTTTTCCCGTCGTTGAGGGCTGTCTGGCACACCCCAAGAAGCCGCAGATCTaGAGCCCCAGTTTTCTGGTG +
Preference number: 5 (lower is better)
Translates to: LEPPCVAFPVVEGCLAHPKKPQI*SPSFLV
Trigger: CACCAGAAAACTGGGGCTCAAGATCTGCGGCTTCTT...GGGGTGTGCCAGACAGCCCTCAACGACGGGAAAAGCTACACAAGGTGGCTCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp TGGCCTTGTCCCCTTGGGGCTGGTAGCCAACCATGGTCGTACCTGACTCCATCACAGGTTCTTGGAGGATaGCCTCTCCTTGAAGGCACT +
Preference number: 5 (lower is better)
Translates to: WPCPLGAGSQPWSYLTPSQVLGG*PLLEGT
Trigger: AGTGCCTTCAAGGAGAGGCAATCCTCCAAGAACCTG...TGATGGAGTCAGGTACGACCATGGTTGGCTACCAGCCCCAAGGGGACAAGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp TGGCCTTGTCCCCTTGGGGCTGGTAGCCAACCATGGTCGTACCTGACTCCATCACAGGAAAGCAGGTTCTaGGAGGATTGCCTCTCCTTG +
Preference number: 5 (lower is better)
Translates to: WPCPLGAGSQPWSYLTPSQESRF*EDCLSL
Trigger: CAAGGAGAGGCAATCCTCCAAGAACCTGCTTTCCTG...TGATGGAGTCAGGTACGACCATGGTTGGCTACCAGCCCCAAGGGGACAAGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp TTGGAGCCACCTTGTGTAGCTTTTCCCGTCGTTGAGGGCTGTCTGGCACACCCCATGATGCTGTACATGTaGGATATGGCGCCCCCAGGA +
Preference number: 5 (lower is better)
Translates to: LEPPCVAFPVVEGCLAHPMMLYM*DMAPPG
Trigger: TCCTGGGGGCGCCATATCCAACATGTACAGCATCAT...GGGGTGTGCCAGACAGCCCTCAACGACGGGAAAAGCTACACAAGGTGGCTCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp TGGCCTTGTCCCCTTGGGGCTGGTAGCCAACCATGGTCGTACCTGACTCCATCAGCCCTTTCTATGCCGTaGAGTTTATGGCGGTGCTTC +
Preference number: 5 (lower is better)
Translates to: WPCPLGAGSQPWSYLTPSALSMP*SLWRCF
Trigger: GAAGCACCGCCATAAACTCAACGGCATAGAAAGGGC...TGATGGAGTCAGGTACGACCATGGTTGGCTACCAGCCCCAAGGGGACAAGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp TGGCCTTGTCCCCTTGGGGCTGGTAGCCAACCATGGTCGTACCTGACTCCATCATTCCAGGTGACTGAGTaGGCCCTTTCTATGCCGTTG +
Preference number: 5 (lower is better)
Translates to: WPCPLGAGSQPWSYLTPSFQVTE*ALSMPL
Trigger: CAACGGCATAGAAAGGGCCAACTCAGTCACCTGGAA...TGATGGAGTCAGGTACGACCATGGTTGGCTACCAGCCCCAAGGGGACAAGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp GGTCGATTCTCACCAACAGCATTTCCCTCGGCCCCTAGGACATGGCGTTTTGAAACCATCCGGAAGAAGTaGGCCTTGTCCCCTTGGGGC +
Preference number: 5 (lower is better)
Translates to: GRFSPTAFPSAPRTWRFETIRKK*ALSPWG
Trigger: GCCCCAAGGGGACAAGGCCAACTTCTTCCGGATGGT...TTCAAAACGCCATGTCCTAGGGGCCGAGGGAAATGCTGTTGGTGAGAATCGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp TGGCCTTGTCCCCTTGGGGCTGGTAGCCAACCATGGTCGTACCTGACTCCATCAGTTTTCCTGGAGTTGTaGGACAAGCTGGTTGGCAGC +
Preference number: 5 (lower is better)
Translates to: WPCPLGAGSQPWSYLTPSVFLEL*DKLVGS
Trigger: GCTGCCAACCAGCTTGTCCAACAACTCCAGGAAAAC...TGATGGAGTCAGGTACGACCATGGTTGGCTACCAGCCCCAAGGGGACAAGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000493875.5
ENST00000625689.2
CDS GCA 90 bp CTGCAAGGGCAGGAAAGGACAGCAGCAGTAGTCTCTCAGTGGGGCTaGCAATCTCGTGAGTCAGCCAACAAGTACTGCAAAGAGACCCCA +
Preference number: 5 (lower is better)
Translates to: LQGQERTAAVVSQWG*QSRESANKYCKETP
Trigger: TGGGGTCTCTTTGCAGTACTTGTTGGCTGACTCACGAGATTGGCAGCCCCACTGAGAGACTACTGCTGCTGTCCTTTCCTGCCCTTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478562.1
CDS-3UTR CAA 90 bp AAAGCATTGAGAACACCAGACGTACAGCCAGACAGAGAGCGTAAGAGAAGAGCACCGCGTTCGAGGAGGTaGCGGACGAAGATGGGGTCG +
Preference number: 5 (lower is better)
Translates to: KALRTPDVQPDRERKRRAPRSRR*RTKMGS
Trigger: CGACCCCATCTTCGTCCGCAACCTCCTCGAACGCGG...TGCTCTTCTCTTACGCTCTCTGTCTGGCTGTACGTCTGGTGTTCTCAATGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp TGCAGTTACCATCACCTCTGGAGGTCACAATCATGCTTTGGTTCTGCTCTGAGCCGCAGGTTAGTGGTATaGGGGTCCGCTCCCGCGTTC +
Preference number: 5 (lower is better)
Translates to: CSYHHLWRSQSCFGSALSRRLVV*GSAPAF
Trigger: GAACGCGGGAGCGGACCCCAATACCACTAACCTGCG...GCTCAGAGCAGAACCAAAGCATGATTGTGACCTCCAGAGGTGATGGTAACTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344257.9
ENST00000375272.5
CDS-3UTR CAA 90 bp TTTTCCTTGGGAGGCCCCTGGAAATTTAGGAGGAAGACCCTTGGAAACCATGTGCGCAGGTTAGTGGTATaGGGGTCCGCTCCCGCGTTC +
Preference number: 5 (lower is better)
Translates to: FSLGGPWKFRRKTLGNHVRRLVV*GSAPAF
Trigger: GAACGCGGGAGCGGACCCCAATACCACTAACCTGCG...CACATGGTTTCCAAGGGTCTTCCTCCTAAATTTCCAGGGGCCTCCCAAGGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344257.9
ENST00000375272.5
CDS-3UTR CAA 90 bp GGAGACATCATACTGCTTGTCTGGCTGGAAGAGGTATCCTGCACACATCTGGTTCGCAGGTTAGTGGTATaGGGGTCCGCTCCCGCGTTC +
Preference number: 5 (lower is better)
Translates to: GDIILLVWLEEVSCTHLVRRLVV*GSAPAF
Trigger: GAACGCGGGAGCGGACCCCAATACCACTAACCTGCG...AACCAGATGTGTGCAGGATACCTCTTCCAGCCAGACAAGCAGTATGATGTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp CACGTGGCGGCCACACTGAATTGCCTTGTCCCCGGTGTCGTAGGAGACATCATACAGGCTGTTGGTCCTTaGCAAGAAGCCGCAGATCTT +
Preference number: 5 (lower is better)
Translates to: HVAATLNCLVPGVVGDIIQAVGP*QEAADL
Trigger: AAGATCTGCGGCTTCTTGCAAAGGACCAACAGCCTG...TATGATGTCTCCTACGACACCGGGGACAAGGCAATTCAGTGTGGCCGCCACGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp TCATCCATCATCACTTCAGGTGGAGAAACGCTGACAGTGAGGTCGATTCTCACCGAAATCACGAGGCCGTaGCTCGCGGGGGCAGCTAGT +
Preference number: 5 (lower is better)
Translates to: SSIITSGGETLTVRSILTEITRP*LAGAAS
Trigger: ACTAGCTGCCCCCGCGAGCAACGGCCTCGTGATTTC...GGTGAGAATCGACCTCACTGTCAGCGTTTCTCCACCTGAAGTGATGATGGATGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000625689.2
CDS-3UTR CAA 90 bp CCTTGTCCCCTTGGGGCTGGTAGCCAACCATGGTCGTACCTGACTCCATCATCAGTCTGGTTCCCGTTGTaGTGTCTGGCTAATTCCCTG +
Preference number: 5 (lower is better)
Translates to: PCPLGAGSQPWSYLTPSSVWFPL*CLANSL
Trigger: CAGGGAATTAGCCAGACACAACAACGGGAACCAGAC...TGATGATGGAGTCAGGTACGACCATGGTTGGCTACCAGCCCCAAGGGGACAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493875.5
CDS GCA 90 bp GCATCCCGGTCGCTGTTTTCACAGGAAAGCAGGTTCTTGGAGGATTaGCTCTCCTTGAAGGCACTCACAAGGCGACTCTTCTCTTCCAGG +
Preference number: 5 (lower is better)
Translates to: ASRSLFSQESRFLED*LSLKALTRRLFSSR
Trigger: CCTGGAAGAGAAGAGTCGCCTTGTGAGTGCCTTCAAGGAGAGGCAATCCTCCAAGAACCTGCTTTCCTGTGAAAACAGCGACCGGGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000344257.9
ENST00000358196.8
ENST00000375272.5
ENST00000414527.6
ENST00000429023.1
ENST00000455008.5
ENST00000456864.5
ENST00000485013.1
ENST00000486850.1
ENST00000493270.1
ENST00000493875.5
ENST00000625689.2
CDS GCA 90 bp GTCACCTTGCACTCCAGACAGCCAGAAAGCAGCGAGTCGGAATGTTaGTTGCCTCCCTCTTATCCCAGCCGGTTTTTAGCCATCGCTAAG +
Preference number: 5 (lower is better)
Translates to: VTLHSRQPESSESEC*LPPSYPSRFLAIAK
Trigger: CTTAGCGATGGCTAAAAACCGGCTGGGATAAGAGGGAGGCAAGCAACATTCCGACTCGCTGCTTTCTGGCTGTCTGGAGTGCAAGGTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493875.5
CDS-3UTR CAA 90 bp CGGAAATGTTGCCTTAGGTTTCAGCTAAGCGAGTCACAGAGATTGGTCATCAACCCGCGTTCGAGGAGGTaGCGGACGAAGATGGGGTCG +
Preference number: 5 (lower is better)
Translates to: RKCCLRFQLSESQRLVINPRSRR*RTKMGS
Trigger: CGACCCCATCTTCGTCCGCAACCTCCTCGAACGCGG...GTTGATGACCAATCTCTGTGACTCGCTTAGCTGAAACCTAAGGCAACATTTCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp AAAGCATTGAGAACACCAGACGTACAGCCAGACAGAGAGCGTAAGAGAAGAGCACGCAGGTTAGTGGTATaGGGGTCCGCTCCCGCGTTC +
Preference number: 5 (lower is better)
Translates to: KALRTPDVQPDRERKRRARRLVV*GSAPAF
Trigger: GAACGCGGGAGCGGACCCCAATACCACTAACCTGCG...TGCTCTTCTCTTACGCTCTCTGTCTGGCTGTACGTCTGGTGTTCTCAATGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp CTGCTTGTCTGGCTGGAAGAGGTATCCTGCACACATCTGGTTGCATCCTTGGAGGAGGATTGCCTCTCCTaGAAGGCACTCACAAGGCGA +
Preference number: 5 (lower is better)
Translates to: LLVWLEEVSCTHLVASLEEDCLS*KALTRR
Trigger: TCGCCTTGTGAGTGCCTTCAAGGAGAGGCAATCCTC...CTCCAAGGATGCAACCAGATGTGTGCAGGATACCTCTTCCAGCCAGACAAGCAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp TTGGAGCCACCTTGTGTAGCTTTTCCCGTCGTTGAGGGCTGTCTGGCACACCCCTCCATCATCAGGGCTTaGATTTTTGGAGCCACCTTG +
Preference number: 5 (lower is better)
Translates to: LEPPCVAFPVVEGCLAHPSIIRA*IFGATL
Trigger: CAAGGTGGCTCCAAAAATCAAAGCCCTGATGATGGA...GGGGTGTGCCAGACAGCCCTCAACGACGGGAAAAGCTACACAAGGTGGCTCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp CATACTGCTTGTCTGGCTGGAAGAGGTATCCTGCACACATCTGGTTGCATCCTTGTTGGCCTTGTCCCCTaGGGGCTGGTAGCCAACCAT +
Preference number: 5 (lower is better)
Translates to: HTACLAGRGILHTSGCILVGLVP*GLVANH
Trigger: ATGGTTGGCTACCAGCCCCAAGGGGACAAGGCCAAC...AAGGATGCAACCAGATGTGTGCAGGATACCTCTTCCAGCCAGACAAGCAGTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp CCTGAGGCTTTGTGGAATATACCAAAAACAGACGTTTGTGTGCTCAGGCTCGCCGTTGGCCTTGTCCCCTaGGGGCTGGTAGCCAACCAT +
Preference number: 5 (lower is better)
Translates to: PEALWNIPKTDVCVLRLAVGLVP*GLVANH
Trigger: ATGGTTGGCTACCAGCCCCAAGGGGACAAGGCCAAC...GGCGAGCCTGAGCACACAAACGTCTGTTTTTGGTATATTCCACAAAGCCTCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp CATACTGCTTGTCTGGCTGGAAGAGGTATCCTGCACACATCTGGTTGCATCCTTACCATCCGGAAGAAGTaGGCCTTGTCCCCTTGGGGC +
Preference number: 5 (lower is better)
Translates to: HTACLAGRGILHTSGCILTIRKK*ALSPWG
Trigger: GCCCCAAGGGGACAAGGCCAACTTCTTCCGGATGGT...AAGGATGCAACCAGATGTGTGCAGGATACCTCTTCCAGCCAGACAAGCAGTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp TGGCCTTGTCCCCTTGGGGCTGGTAGCCAACCATGGTCGTACCTGACTCCATCATGGGGAGGGTGTGACTaGTCATTTGGTGGTGTTTTT +
Preference number: 5 (lower is better)
Translates to: WPCPLGAGSQPWSYLTPSWGGCD*SFGGVF
Trigger: AAAAACACCACCAAATGACAAGTCACACCCTCCCCA...TGATGGAGTCAGGTACGACCATGGTTGGCTACCAGCCCCAAGGGGACAAGGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp TGTGTGCAGTTACCATCACCTCTGGAGGTCACAATCATGCTTTGGTTCTGCTCTGAAATCACGAGGCCGTaGCTCGCGGGGGCAGCTAGT +
Preference number: 5 (lower is better)
Translates to: CVQLPSPLEVTIMLWFCSEITRP*LAGAAS
Trigger: ACTAGCTGCCCCCGCGAGCAACGGCCTCGTGATTTC...AGAGCAGAACCAAAGCATGATTGTGACCTCCAGAGGTGATGGTAACTGCACACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375272.5
CDS-3UTR CAA 90 bp GCTTTGTGGAATATACCAAAAACAGACGTTTGTGTGCTCAGGCTCGCCATTGAACCGCTACAAGCCCCATaGGGCACTCAGCAGCCGGCG +
Preference number: 5 (lower is better)
Translates to: ALWNIPKTDVCVLRLAIEPLQAP*GTQQPA
Trigger: CGCCGGCTGCTGAGTGCCCAATGGGGCTTGTAGCGG...TTCAATGGCGAGCCTGAGCACACAAACGTCTGTTTTTGGTATATTCCACAAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493875.5
CDS-3UTR CAA 90 bp ACAATCATTGAAATCATGACACATAGTCTCCCCCTCCCACCACCAAGGTCAGACGCACGGAGGCTCCCCTaGAAGATCCGGCTCTGGAGA +
Preference number: 5 (lower is better)
Translates to: TIIEIMTHSLPLPPPRSDARRLP*KIRLWR
Trigger: TCTCCAGAGCCGGATCTTCAAGGGGAGCCTCCGTGC...GTCTGACCTTGGTGGTGGGAGGGGGAGACTATGTGTCATGATTTCAATGATTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493875.5
CDS TCA 90 bp CGCTGTTTTCACAGGAAAGCAGGTTCTTGGAGGATTGCCTCTCCTTaGAGGCACTCACAAGGCGACTCTTCTCTTCCAGGCTGTTGGTCC +
Preference number: 5 (lower is better)
Translates to: RCFHRKAGSWRIASP*RHSQGDSSLPGCWS
Trigger: GGACCAACAGCCTGGAAGAGAAGAGTCGCCTTGTGAGTGCCTTCAAGGAGAGGCAATCCTCCAAGAACCTGCTTTCCTGTGAAAACAGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000344257.9
ENST00000358196.8
ENST00000375272.5
ENST00000414527.6
ENST00000429023.1
ENST00000454603.5
ENST00000455008.5
ENST00000456864.5
ENST00000485013.1
ENST00000486850.1
ENST00000493270.1
ENST00000493875.5
ENST00000625689.2
CDS TCA 90 bp GGAAAGGACAGCAGCAGTAGTCTCTCAGTGGGGCTGCCAATCTCGTaGGTCAGCCAACAAGTACTGCAAAGAGACCCCACGTGTGTCTTT +
Preference number: 5 (lower is better)
Translates to: GKDSSSSLSVGLPIS*VSQQVLQRDPTCVF
Trigger: AAAGACACACGTGGGGTCTCTTTGCAGTACTTGTTGGCTGACTCACGAGATTGGCAGCCCCACTGAGAGACTACTGCTGCTGTCCTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478562.1
CDS GCA 90 bp AAGGCACTCACAAGGCGACTCTTCTCTTCCAGGCTGTTGGTCCTTTaGAAGAAGCCTATGGCACAAGAAGCTGGTCAGAGAGAGTGCTGC +
Preference number: 5 (lower is better)
Translates to: KALTRRLFSSRLLVL*KKPMAQEAGQRECC
Trigger: GCAGCACTCTCTCTGACCAGCTTCTTGTGCCATAGGCTTCTTGCAAAGGACCAACAGCCTGGAAGAGAAGAGTCGCCTTGTGAGTGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493270.1
CDS CCA 90 bp CCATGTGTGCAGTTACCATCACCTCTGGAGGTCACAATCATGCTTTaGTTCTGCTCTGAGCCCCATCACCGTAGCAACCAACACTCCCTC +
Preference number: 5 (lower is better)
Translates to: PCVQLPSPLEVTIML*FCSEPHHRSNQHSL
Trigger: GAGGGAGTGTTGGTTGCTACGGTGATGGGGCTCAGAGCAGAACCAAAGCATGATTGTGACCTCCAGAGGTGATGGTAACTGCACACATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344257.9
ENST00000375272.5
CDS-3UTR CAA 90 bp GGTCGATTCTCACCAACAGCATTTCCCTCGGCCCCTAGGACATGGCGTTTTGAACAGGCTGTTGGTCCTTaGCAAGAAGCCGCAGATCTT +
Preference number: 5 (lower is better)
Translates to: GRFSPTAFPSAPRTWRFEQAVGP*QEAADL
Trigger: AAGATCTGCGGCTTCTTGCAAAGGACCAACAGCCTG...TTCAAAACGCCATGTCCTAGGGGCCGAGGGAAATGCTGTTGGTGAGAATCGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp CTGCTTGTCTGGCTGGAAGAGGTATCCTGCACACATCTGGTTGCATCCTTGGAGGAGGAATTGCACGGTTaGCTCCTCACCGTTCTTAGC +
Preference number: 5 (lower is better)
Translates to: LLVWLEEVSCTHLVASLEEELHG*LLTVLS
Trigger: GCTAAGAACGGTGAGGAGCAAACCGTGCAATTCCTC...CTCCAAGGATGCAACCAGATGTGTGCAGGATACCTCTTCCAGCCAGACAAGCAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp CCTTGTCCCCTTGGGGCTGGTAGCCAACCATGGTCGTACCTGACTCCATCATCAGAGACATCATACTGCTaGTCTGGCTGGAAGAGGTAT +
Preference number: 5 (lower is better)
Translates to: PCPLGAGSQPWSYLTPSSETSYC*SGWKRY
Trigger: ATACCTCTTCCAGCCAGACAAGCAGTATGATGTCTC...TGATGATGGAGTCAGGTACGACCATGGTTGGCTACCAGCCCCAAGGGGACAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp GTGACTGAGTTGGCCCTTTCTATGCCGTTGAGTTTATGGCGGTGCTTCCTGGACCACATCAGCCAGAACTaGAAGATATCCACGTGGCGG +
Preference number: 5 (lower is better)
Translates to: VTELALSMPLSLWRCFLDHISQN*KISTWR
Trigger: CCGCCACGTGGATATCTTCAAGTTCTGGCTGATGTG...GTCCAGGAAGCACCGCCATAAACTCAACGGCATAGAAAGGGCCAACTCAGTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414527.6
CDS-3UTR CAA 90 bp GAACACCAGACGTACAGCCAGACAGAGAGCGTAAGAGAAGAGCAGATGCTATTTGTTGGCCTTGTCCCCTaGGGGCTGGTAGCCAACCAT +
Preference number: 5 (lower is better)
Translates to: EHQTYSQTESVREEQMLFVGLVP*GLVANH
Trigger: ATGGTTGGCTACCAGCCCCAAGGGGACAAGGCCAAC...AAATAGCATCTGCTCTTCTCTTACGCTCTCTGTCTGGCTGTACGTCTGGTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp ACAATCATTGAAATCATGACACATAGTCTCCCCCTCCCACCACCAAGGTCAGACACCATCCGGAAGAAGTaGGCCTTGTCCCCTTGGGGC +
Preference number: 5 (lower is better)
Translates to: TIIEIMTHSLPLPPPRSDTIRKK*ALSPWG
Trigger: GCCCCAAGGGGACAAGGCCAACTTCTTCCGGATGGT...GTCTGACCTTGGTGGTGGGAGGGGGAGACTATGTGTCATGATTTCAATGATTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp CCCCTGAGGCTTTGTGGAATATACCAAAAACAGACGTTTGTGTGCTCAGGCTCGCGTTCTCCCTCGGACTaGGCCAGAGAAGAACCACAG +
Preference number: 5 (lower is better)
Translates to: PLRLCGIYQKQTFVCSGSRSPSD*AREEPQ
Trigger: CTGTGGTTCTTCTCTGGCCAAGTCCGAGGGAGAACG...CGAGCCTGAGCACACAAACGTCTGTTTTTGGTATATTCCACAAAGCCTCAGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493875.5
CDS GCA 90 bp GTGCAGTTACCATCACCTCTGGAGGTCACAATCATGCTTTGGTTCTaGTCTGAGCCCCATCACCGTAGCAACCAACACTCCCTCATGTCT +
Preference number: 5 (lower is better)
Translates to: VQLPSPLEVTIMLWF*SEPHHRSNQHSLMS
Trigger: AGACATGAGGGAGTGTTGGTTGCTACGGTGATGGGGCTCAGAGCAGAACCAAAGCATGATTGTGACCTCCAGAGGTGATGGTAACTGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344257.9
ENST00000375272.5
CDS CCA 90 bp AGAGAGCTCCAAGTTGAAGCCCTCCATGCCTTCCAGCAACTGGTGTaGGTGATGAAAGTCCAGCACCTTGGTGGAGCGATCAAATGTCTT +
Preference number: 5 (lower is better)
Translates to: RELQVEALHAFQQLV*VMKVQHLGGAIKCL
Trigger: AAGACATTTGATCGCTCCACCAAGGTGCTGGACTTTCATCACCCACACCAGTTGCTGGAAGGCATGGAGGGCTTCAACTTGGAGCTCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344257.9
ENST00000358196.8
ENST00000375272.5
ENST00000414527.6
ENST00000429023.1
ENST00000493875.5
ENST00000625689.2
CDS CCA 90 bp AGGAGGAAGACCCTTGGAAACCATGTGTGCAGTTACCATCACCTCTaGAGGTCACAATCATGCTTTGGTTCTGCTCTGAGCCCCATCACC +
Preference number: 5 (lower is better)
Translates to: RRKTLGNHVCSYHHL*RSQSCFGSALSPIT
Trigger: GGTGATGGGGCTCAGAGCAGAACCAAAGCATGATTGTGACCTCCAGAGGTGATGGTAACTGCACACATGGTTTCCAAGGGTCTTCCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344257.9
ENST00000375272.5
CDS-3UTR CAA 90 bp TGCAGTTACCATCACCTCTGGAGGTCACAATCATGCTTTGGTTCTGCTCTGAGCGAGGATTGCCTCTCCTaGAAGGCACTCACAAGGCGA +
Preference number: 5 (lower is better)
Translates to: CSYHHLWRSQSCFGSALSEDCLS*KALTRR
Trigger: TCGCCTTGTGAGTGCCTTCAAGGAGAGGCAATCCTC...GCTCAGAGCAGAACCAAAGCATGATTGTGACCTCCAGAGGTGATGGTAACTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344257.9
ENST00000375272.5
CDS-3UTR CAA 90 bp CCTGAGGCTTTGTGGAATATACCAAAAACAGACGTTTGTGTGCTCAGGCTCGCCGAGGATTGCCTCTCCTaGAAGGCACTCACAAGGCGA +
Preference number: 5 (lower is better)
Translates to: PEALWNIPKTDVCVLRLAEDCLS*KALTRR
Trigger: TCGCCTTGTGAGTGCCTTCAAGGAGAGGCAATCCTC...GGCGAGCCTGAGCACACAAACGTCTGTTTTTGGTATATTCCACAAAGCCTCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp TTGGAGCCACCTTGTGTAGCTTTTCCCGTCGTTGAGGGCTGTCTGGCACACCCCGCCAGTTCCAGGCATTaGTTGATCTGGTTTTCAAAT +
Preference number: 5 (lower is better)
Translates to: LEPPCVAFPVVEGCLAHPASSRH*LIWFSN
Trigger: ATTTGAAAACCAGATCAACAAATGCCTGGAACTGGC...GGGGTGTGCCAGACAGCCCTCAACGACGGGAAAAGCTACACAAGGTGGCTCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp CTTTCTATGCCGTTGAGTTTATGGCGGTGCTTCCTGGACATGAGCAGCCCACCTACCAAAAACAGACGTTaGTGTGCTCAGGCTCGCCAT +
Preference number: 5 (lower is better)
Translates to: LSMPLSLWRCFLDMSSPPTKNRR*CAQARH
Trigger: ATGGCGAGCCTGAGCACACAAACGTCTGTTTTTGGT...AGGTGGGCTGCTCATGTCCAGGAAGCACCGCCATAAACTCAACGGCATAGAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414527.6
CDS-3UTR CAA 90 bp CTGCTTGTCTGGCTGGAAGAGGTATCCTGCACACATCTGGTTGCATCCTTGGAGACCAAAAACAGACGTTaGTGTGCTCAGGCTCGCCAT +
Preference number: 5 (lower is better)
Translates to: LLVWLEEVSCTHLVASLETKNRR*CAQARH
Trigger: ATGGCGAGCCTGAGCACACAAACGTCTGTTTTTGGT...CTCCAAGGATGCAACCAGATGTGTGCAGGATACCTCTTCCAGCCAGACAAGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp CCTTGTCCCCTTGGGGCTGGTAGCCAACCATGGTCGTACCTGACTCCATCATCAGTTGCTAGAAAAGCATaGAGAACACCAGACGTACAG +
Preference number: 5 (lower is better)
Translates to: PCPLGAGSQPWSYLTPSSVARKA*RTPDVQ
Trigger: CTGTACGTCTGGTGTTCTCAATGCTTTTCTAGCAAC...TGATGATGGAGTCAGGTACGACCATGGTTGGCTACCAGCCCCAAGGGGACAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp GGAGACATCATACTGCTTGTCTGGCTGGAAGAGGTATCCTGCACACATCTGGTTCAGCGAGTCGGAATGTaGCTTGCCTCCCTCTTATCC +
Preference number: 5 (lower is better)
Translates to: GDIILLVWLEEVSCTHLVQRVGM*LASLLS
Trigger: GGATAAGAGGGAGGCAAGCAACATTCCGACTCGCTG...AACCAGATGTGTGCAGGATACCTCTTCCAGCCAGACAAGCAGTATGATGTCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493875.5
CDS-3UTR CAA 90 bp AGAACACCAGACGTACAGCCAGACAGAGAGCGTAAGAGAAGAGCAGATGCTATTCGGGGACTAGGGACTTaGGTGAGACAAGGTGAGAGG +
Preference number: 5 (lower is better)
Translates to: RTPDVQPDRERKRRADAIRGLGT*VRQGER
Trigger: CCTCTCACCTTGTCTCACCAAAGTCCCTAGTCCCCG...AATAGCATCTGCTCTTCTCTTACGCTCTCTGTCTGGCTGTACGTCTGGTGTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493875.5
CDS TCA 90 bp AGTCCAGCACCTTGGTGGAGCGATCAAATGTCTTGCGGACATAGTTaGGGAGTATGTCCACCACTTCCAGGAGGAATTGCACGGTTTGCT +
Preference number: 5 (lower is better)
Translates to: SPAPWWSDQMSCGHS*GVCPPLPGGIARFA
Trigger: AGCAAACCGTGCAATTCCTCCTGGAAGTGGTGGACATACTCCTCAACTATGTCCGCAAGACATTTGATCGCTCCACCAAGGTGCTGGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000344257.9
ENST00000358196.8
ENST00000375272.5
ENST00000414527.6
ENST00000429023.1
ENST00000493270.1
ENST00000493875.5
ENST00000625689.2
CDS GCA 90 bp GGAAACCATGTGTGCAGTTACCATCACCTCTGGAGGTCACAATCATaGTTTGGTTCTGCTCTGAGCCCCATCACCGTAGCAACCAACACT +
Preference number: 5 (lower is better)
Translates to: GNHVCSYHHLWRSQS*FGSALSPITVATNT
Trigger: AGTGTTGGTTGCTACGGTGATGGGGCTCAGAGCAGAACCAAAGCATGATTGTGACCTCCAGAGGTGATGGTAACTGCACACATGGTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344257.9
ENST00000375272.5
CDS-3UTR CAA 90 bp TGTCCATTTTCCTTGGGAGGCCCCTGGAAATTTAGGAGGAAGACCCTTGGAAACAAGAAGCCGCAGATCTaGAGCCCCAGTTTTCTGGTG +
Preference number: 5 (lower is better)
Translates to: CPFSLGGPWKFRRKTLGNKKPQI*SPSFLV
Trigger: CACCAGAAAACTGGGGCTCAAGATCTGCGGCTTCTT...GTTTCCAAGGGTCTTCCTCCTAAATTTCCAGGGGCCTCCCAAGGAAAATGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000344257.9
ENST00000375272.5
CDS-3UTR CAA 90 bp CCATTTTCCTTGGGAGGCCCCTGGAAATTTAGGAGGAAGACCCTTGGAAACCATAAGAAGCCGCAGATCTaGAGCCCCAGTTTTCTGGTG +
Preference number: 5 (lower is better)
Translates to: PFSLGGPWKFRRKTLGNHKKPQI*SPSFLV
Trigger: CACCAGAAAACTGGGGCTCAAGATCTGCGGCTTCTT...ATGGTTTCCAAGGGTCTTCCTCCTAAATTTCCAGGGGCCTCCCAAGGAAAATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000344257.9
ENST00000375272.5
CDS-3UTR CAA 90 bp TGTCCATTTTCCTTGGGAGGCCCCTGGAAATTTAGGAGGAAGACCCTTGGAAACCAGGCTGTTGGTCCTTaGCAAGAAGCCGCAGATCTT +
Preference number: 5 (lower is better)
Translates to: CPFSLGGPWKFRRKTLGNQAVGP*QEAADL
Trigger: AAGATCTGCGGCTTCTTGCAAAGGACCAACAGCCTG...GTTTCCAAGGGTCTTCCTCCTAAATTTCCAGGGGCCTCCCAAGGAAAATGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344257.9
ENST00000375272.5
CDS-3UTR CAA 90 bp GTGTGCAGTTACCATCACCTCTGGAGGTCACAATCATGCTTTGGTTCTGCTCTGTTCTCTTCCAGGCTGTaGGTCCTTTGCAAGAAGCCG +
Preference number: 5 (lower is better)
Translates to: VCSYHHLWRSQSCFGSALFSSRL*VLCKKP
Trigger: CGGCTTCTTGCAAAGGACCAACAGCCTGGAAGAGAA...CAGAGCAGAACCAAAGCATGATTGTGACCTCCAGAGGTGATGGTAACTGCACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344257.9
ENST00000375272.5
CDS-3UTR CAA 90 bp CCTGAGGCTTTGTGGAATATACCAAAAACAGACGTTTGTGTGCTCAGGCTCGCCTTCTCTTCCAGGCTGTaGGTCCTTTGCAAGAAGCCG +
Preference number: 5 (lower is better)
Translates to: PEALWNIPKTDVCVLRLAFSSRL*VLCKKP
Trigger: CGGCTTCTTGCAAAGGACCAACAGCCTGGAAGAGAA...GGCGAGCCTGAGCACACAAACGTCTGTTTTTGGTATATTCCACAAAGCCTCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp GGAGACATCATACTGCTTGTCTGGCTGGAAGAGGTATCCTGCACACATCTGGTTTTCTCTTCCAGGCTGTaGGTCCTTTGCAAGAAGCCG +
Preference number: 5 (lower is better)
Translates to: GDIILLVWLEEVSCTHLVFSSRL*VLCKKP
Trigger: CGGCTTCTTGCAAAGGACCAACAGCCTGGAAGAGAA...AACCAGATGTGTGCAGGATACCTCTTCCAGCCAGACAAGCAGTATGATGTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp AGAACACCAGACGTACAGCCAGACAGAGAGCGTAAGAGAAGAGCAGATGCTATTGAGGATTGCCTCTCCTaGAAGGCACTCACAAGGCGA +
Preference number: 5 (lower is better)
Translates to: RTPDVQPDRERKRRADAIEDCLS*KALTRR
Trigger: TCGCCTTGTGAGTGCCTTCAAGGAGAGGCAATCCTC...AATAGCATCTGCTCTTCTCTTACGCTCTCTGTCTGGCTGTACGTCTGGTGTTCT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp TGTGTGCAGTTACCATCACCTCTGGAGGTCACAATCATGCTTTGGTTCTGCTCTGAGGATTGCCTCTCCTaGAAGGCACTCACAAGGCGA +
Preference number: 5 (lower is better)
Translates to: CVQLPSPLEVTIMLWFCSEDCLS*KALTRR
Trigger: TCGCCTTGTGAGTGCCTTCAAGGAGAGGCAATCCTC...AGAGCAGAACCAAAGCATGATTGTGACCTCCAGAGGTGATGGTAACTGCACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344257.9
ENST00000375272.5
CDS-3UTR CAA 90 bp ACAATCATTGAAATCATGACACATAGTCTCCCCCTCCCACCACCAAGGTCAGACGAGGATTGCCTCTCCTaGAAGGCACTCACAAGGCGA +
Preference number: 5 (lower is better)
Translates to: TIIEIMTHSLPLPPPRSDEDCLS*KALTRR
Trigger: TCGCCTTGTGAGTGCCTTCAAGGAGAGGCAATCCTC...GTCTGACCTTGGTGGTGGGAGGGGGAGACTATGTGTCATGATTTCAATGATTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp CCATGTGTGCAGTTACCATCACCTCTGGAGGTCACAATCATGCTTTGGTTCTGCCAGGTTCTTGGAGGATaGCCTCTCCTTGAAGGCACT +
Preference number: 5 (lower is better)
Translates to: PCVQLPSPLEVTIMLWFCQVLGG*PLLEGT
Trigger: AGTGCCTTCAAGGAGAGGCAATCCTCCAAGAACCTG...GCAGAACCAAAGCATGATTGTGACCTCCAGAGGTGATGGTAACTGCACACATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344257.9
ENST00000375272.5
CDS-3UTR CAA 90 bp CCATGTGTGCAGTTACCATCACCTCTGGAGGTCACAATCATGCTTTGGTTCTGCCAGGAAAGCAGGTTCTaGGAGGATTGCCTCTCCTTG +
Preference number: 5 (lower is better)
Translates to: PCVQLPSPLEVTIMLWFCQESRF*EDCLSL
Trigger: CAAGGAGAGGCAATCCTCCAAGAACCTGCTTTCCTG...GCAGAACCAAAGCATGATTGTGACCTCCAGAGGTGATGGTAACTGCACACATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344257.9
ENST00000375272.5
CDS-3UTR CAA 90 bp CATACTGCTTGTCTGGCTGGAAGAGGTATCCTGCACACATCTGGTTGCATCCTTCAGGAAAGCAGGTTCTaGGAGGATTGCCTCTCCTTG +
Preference number: 5 (lower is better)
Translates to: HTACLAGRGILHTSGCILQESRF*EDCLSL
Trigger: CAAGGAGAGGCAATCCTCCAAGAACCTGCTTTCCTG...AAGGATGCAACCAGATGTGTGCAGGATACCTCTTCCAGCCAGACAAGCAGTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp CCCCTGAGGCTTTGTGGAATATACCAAAAACAGACGTTTGTGTGCTCAGGCTCGCAGGAAAGCAGGTTCTaGGAGGATTGCCTCTCCTTG +
Preference number: 5 (lower is better)
Translates to: PLRLCGIYQKQTFVCSGSQESRF*EDCLSL
Trigger: CAAGGAGAGGCAATCCTCCAAGAACCTGCTTTCCTG...CGAGCCTGAGCACACAAACGTCTGTTTTTGGTATATTCCACAAAGCCTCAGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp TGCAGTTACCATCACCTCTGGAGGTCACAATCATGCTTTGGTTCTGCTCTGAGCGAGGAATTGCACGGTTaGCTCCTCACCGTTCTTAGC +
Preference number: 5 (lower is better)
Translates to: CSYHHLWRSQSCFGSALSEELHG*LLTVLS
Trigger: GCTAAGAACGGTGAGGAGCAAACCGTGCAATTCCTC...GCTCAGAGCAGAACCAAAGCATGATTGTGACCTCCAGAGGTGATGGTAACTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344257.9
ENST00000375272.5
CDS-3UTR CAA 90 bp CACGTGGCGGCCACACTGAATTGCCTTGTCCCCGGTGTCGTAGGAGACATCATACATCACCATCTTTACTaGACCATCCAACTATCTCTC +
Preference number: 5 (lower is better)
Translates to: HVAATLNCLVPGVVGDIIHHHLY*TIQLSL
Trigger: GAGAGATAGTTGGATGGTCAAGTAAAGATGGTGATG...TATGATGTCTCCTACGACACCGGGGACAAGGCAATTCAGTGTGGCCGCCACGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp CATACTGCTTGTCTGGCTGGAAGAGGTATCCTGCACACATCTGGTTGCATCCTTATGATGCTGTACATGTaGGATATGGCGCCCCCAGGA +
Preference number: 5 (lower is better)
Translates to: HTACLAGRGILHTSGCILMMLYM*DMAPPG
Trigger: TCCTGGGGGCGCCATATCCAACATGTACAGCATCAT...AAGGATGCAACCAGATGTGTGCAGGATACCTCTTCCAGCCAGACAAGCAGTATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp CATACTGCTTGTCTGGCTGGAAGAGGTATCCTGCACACATCTGGTTGCATCCTTGCCCTTTCTATGCCGTaGAGTTTATGGCGGTGCTTC +
Preference number: 5 (lower is better)
Translates to: HTACLAGRGILHTSGCILALSMP*SLWRCF
Trigger: GAAGCACCGCCATAAACTCAACGGCATAGAAAGGGC...AAGGATGCAACCAGATGTGTGCAGGATACCTCTTCCAGCCAGACAAGCAGTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp TCATACTGCTTGTCTGGCTGGAAGAGGTATCCTGCACACATCTGGTTGCATCCTTTCCAGGTGACTGAGTaGGCCCTTTCTATGCCGTTG +
Preference number: 5 (lower is better)
Translates to: SYCLSGWKRYPAHIWLHPFQVTE*ALSMPL
Trigger: CAACGGCATAGAAAGGGCCAACTCAGTCACCTGGAA...AGGATGCAACCAGATGTGTGCAGGATACCTCTTCCAGCCAGACAAGCAGTATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp CCTGAGGCTTTGTGGAATATACCAAAAACAGACGTTTGTGTGCTCAGGCTCGCCATCCCACTGTGCCCTTaGCTTTCCACATCAGCCAGA +
Preference number: 5 (lower is better)
Translates to: PEALWNIPKTDVCVLRLAIPLCP*LSTSAR
Trigger: TCTGGCTGATGTGGAAAGCAAAGGGCACAGTGGGAT...GGCGAGCCTGAGCACACAAACGTCTGTTTTTGGTATATTCCACAAAGCCTCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp CCTGAGGCTTTGTGGAATATACCAAAAACAGACGTTTGTGTGCTCAGGCTCGCCGTTTTCCTGGAGTTGTaGGACAAGCTGGTTGGCAGC +
Preference number: 5 (lower is better)
Translates to: PEALWNIPKTDVCVLRLAVFLEL*DKLVGS
Trigger: GCTGCCAACCAGCTTGTCCAACAACTCCAGGAAAAC...GGCGAGCCTGAGCACACAAACGTCTGTTTTTGGTATATTCCACAAAGCCTCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000493875.5
ENST00000625689.2
CDS GCA 90 bp GTGACTGAGTTGGCCCTGAAAGAAGCACATGAGACTTCGAGAAGGTaGAGGAGTTGGAAAGACGCAACTGTTCTCTTGAGGAAAACACCC +
Preference number: 5 (lower is better)
Translates to: VTELALKEAHETSRR*RSWKDATVLLRKTP
Trigger: GGGTGTTTTCCTCAAGAGAACAGTTGCGTCTTTCCAACTCCTGCACCTTCTCGAAGTCTCATGTGCTTCTTTCAGGGCCAACTCAGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478562.1
CDS-3UTR CAA 90 bp AAAGCATTGAGAACACCAGACGTACAGCCAGACAGAGAGCGTAAGAGAAGAGCAAAGAAGCCGCAGATCTaGAGCCCCAGTTTTCTGGTG +
Preference number: 5 (lower is better)
Translates to: KALRTPDVQPDRERKRRAKKPQI*SPSFLV
Trigger: CACCAGAAAACTGGGGCTCAAGATCTGCGGCTTCTT...TGCTCTTCTCTTACGCTCTCTGTCTGGCTGTACGTCTGGTGTTCTCAATGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp GGCATTCCCATAAACTCATGTTCTGCGAAGGATGATTACAGATCCTGGCCCAGTAAGAAGCCGCAGATCTaGAGCCCCAGTTTTCTGGTG +
Preference number: 5 (lower is better)
Translates to: GIPINSCSAKDDYRSWPSKKPQI*SPSFLV
Trigger: CACCAGAAAACTGGGGCTCAAGATCTGCGGCTTCTT...ACTGGGCCAGGATCTGTAATCATCCTTCGCAGAACATGAGTTTATGGGAATGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp CTGAGGCTTTGTGGAATATACCAAAAACAGACGTTTGTGTGCTCAGGCTCGCCAAAGAAGCCGCAGATCTaGAGCCCCAGTTTTCTGGTG +
Preference number: 5 (lower is better)
Translates to: LRLCGIYQKQTFVCSGSPKKPQI*SPSFLV
Trigger: CACCAGAAAACTGGGGCTCAAGATCTGCGGCTTCTT...TGGCGAGCCTGAGCACACAAACGTCTGTTTTTGGTATATTCCACAAAGCCTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp GGTCTTCGGAAATGTTGCCTTAGGTTTCAGCTAAGCGAGTCACAGAGATTGGTCCAGGCTGTTGGTCCTTaGCAAGAAGCCGCAGATCTT +
Preference number: 5 (lower is better)
Translates to: GLRKCCLRFQLSESQRLVQAVGP*QEAADL
Trigger: AAGATCTGCGGCTTCTTGCAAAGGACCAACAGCCTG...GACCAATCTCTGTGACTCGCTTAGCTGAAACCTAAGGCAACATTTCCGAAGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp AAAGCATTGAGAACACCAGACGTACAGCCAGACAGAGAGCGTAAGAGAAGAGCACAGGCTGTTGGTCCTTaGCAAGAAGCCGCAGATCTT +
Preference number: 5 (lower is better)
Translates to: KALRTPDVQPDRERKRRAQAVGP*QEAADL
Trigger: AAGATCTGCGGCTTCTTGCAAAGGACCAACAGCCTG...TGCTCTTCTCTTACGCTCTCTGTCTGGCTGTACGTCTGGTGTTCTCAATGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp CTGAGGCTTTGTGGAATATACCAAAAACAGACGTTTGTGTGCTCAGGCTCGCCATTCTCTTCCAGGCTGTaGGTCCTTTGCAAGAAGCCG +
Preference number: 5 (lower is better)
Translates to: LRLCGIYQKQTFVCSGSPFSSRL*VLCKKP
Trigger: CGGCTTCTTGCAAAGGACCAACAGCCTGGAAGAGAA...TGGCGAGCCTGAGCACACAAACGTCTGTTTTTGGTATATTCCACAAAGCCTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp GAACACCAGACGTACAGCCAGACAGAGAGCGTAAGAGAAGAGCAGATGCTATTTCAGGTTCTTGGAGGATaGCCTCTCCTTGAAGGCACT +
Preference number: 5 (lower is better)
Translates to: EHQTYSQTESVREEQMLFQVLGG*PLLEGT
Trigger: AGTGCCTTCAAGGAGAGGCAATCCTCCAAGAACCTG...AAATAGCATCTGCTCTTCTCTTACGCTCTCTGTCTGGCTGTACGTCTGGTGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp AAAGCATTGAGAACACCAGACGTACAGCCAGACAGAGAGCGTAAGAGAAGAGCACAGGTTCTTGGAGGATaGCCTCTCCTTGAAGGCACT +
Preference number: 5 (lower is better)
Translates to: KALRTPDVQPDRERKRRAQVLGG*PLLEGT
Trigger: AGTGCCTTCAAGGAGAGGCAATCCTCCAAGAACCTG...TGCTCTTCTCTTACGCTCTCTGTCTGGCTGTACGTCTGGTGTTCTCAATGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp TGTGTGCAGTTACCATCACCTCTGGAGGTCACAATCATGCTTTGGTTCTGCTCTCAGGAAAGCAGGTTCTaGGAGGATTGCCTCTCCTTG +
Preference number: 5 (lower is better)
Translates to: CVQLPSPLEVTIMLWFCSQESRF*EDCLSL
Trigger: CAAGGAGAGGCAATCCTCCAAGAACCTGCTTTCCTG...AGAGCAGAACCAAAGCATGATTGTGACCTCCAGAGGTGATGGTAACTGCACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344257.9
ENST00000375272.5
CDS-3UTR CAA 90 bp AAAGCATTGAGAACACCAGACGTACAGCCAGACAGAGAGCGTAAGAGAAGAGCACAGGAAAGCAGGTTCTaGGAGGATTGCCTCTCCTTG +
Preference number: 5 (lower is better)
Translates to: KALRTPDVQPDRERKRRAQESRF*EDCLSL
Trigger: CAAGGAGAGGCAATCCTCCAAGAACCTGCTTTCCTG...TGCTCTTCTCTTACGCTCTCTGTCTGGCTGTACGTCTGGTGTTCTCAATGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp ACAATCATTGAAATCATGACACATAGTCTCCCCCTCCCACCACCAAGGTCAGACGAGGAATTGCACGGTTaGCTCCTCACCGTTCTTAGC +
Preference number: 5 (lower is better)
Translates to: TIIEIMTHSLPLPPPRSDEELHG*LLTVLS
Trigger: GCTAAGAACGGTGAGGAGCAAACCGTGCAATTCCTC...GTCTGACCTTGGTGGTGGGAGGGGGAGACTATGTGTCATGATTTCAATGATTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp GGCATTCCCATAAACTCATGTTCTGCGAAGGATGATTACAGATCCTGGCCCAGTGAGGAATTGCACGGTTaGCTCCTCACCGTTCTTAGC +
Preference number: 5 (lower is better)
Translates to: GIPINSCSAKDDYRSWPSEELHG*LLTVLS
Trigger: GCTAAGAACGGTGAGGAGCAAACCGTGCAATTCCTC...ACTGGGCCAGGATCTGTAATCATCCTTCGCAGAACATGAGTTTATGGGAATGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp GTCCATTTTCCTTGGGAGGCCCCTGGAAATTTAGGAGGAAGACCCTTGGAAACCATGTCTGATGGCATGTaGGTATTGGCCGTTGATGTC +
Preference number: 5 (lower is better)
Translates to: VHFPWEAPGNLGGRPLETMSDGM*VLAVDV
Trigger: GACATCAACGGCCAATACCAACATGCCATCAGACAT...GGTTTCCAAGGGTCTTCCTCCTAAATTTCCAGGGGCCTCCCAAGGAAAATGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344257.9
ENST00000375272.5
CDS-3UTR CAA 90 bp CCTTGTCCCCTTGGGGCTGGTAGCCAACCATGGTCGTACCTGACTCCATCATCATCATATGTAAACATGTaGGTATTGGCCGTTGATGTC +
Preference number: 5 (lower is better)
Translates to: PCPLGAGSQPWSYLTPSSSYVNM*VLAVDV
Trigger: GACATCAACGGCCAATACCAACATGTTTACATATGA...TGATGATGGAGTCAGGTACGACCATGGTTGGCTACCAGCCCCAAGGGGACAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp AGAACACCAGACGTACAGCCAGACAGAGAGCGTAAGAGAAGAGCAGATGCTATTATGATGCTGTACATGTaGGATATGGCGCCCCCAGGA +
Preference number: 5 (lower is better)
Translates to: RTPDVQPDRERKRRADAIMMLYM*DMAPPG
Trigger: TCCTGGGGGCGCCATATCCAACATGTACAGCATCAT...AATAGCATCTGCTCTTCTCTTACGCTCTCTGTCTGGCTGTACGTCTGGTGTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp CACGTGGCGGCCACACTGAATTGCCTTGTCCCCGGTGTCGTAGGAGACATCATATGGCTTCAAGAATTTTaGCCTCAAAATCAGCTGGAA +
Preference number: 5 (lower is better)
Translates to: HVAATLNCLVPGVVGDIIWLQEF*PQNQLE
Trigger: TTCCAGCTGATTTTGAGGCAAAAATTCTTGAAGCCA...TATGATGTCTCCTACGACACCGGGGACAAGGCAATTCAGTGTGGCCGCCACGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp GAACACCAGACGTACAGCCAGACAGAGAGCGTAAGAGAAGAGCAGATGCTATTTGCCCTTTCTATGCCGTaGAGTTTATGGCGGTGCTTC +
Preference number: 5 (lower is better)
Translates to: EHQTYSQTESVREEQMLFALSMP*SLWRCF
Trigger: GAAGCACCGCCATAAACTCAACGGCATAGAAAGGGC...AAATAGCATCTGCTCTTCTCTTACGCTCTCTGTCTGGCTGTACGTCTGGTGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp AAAGCATTGAGAACACCAGACGTACAGCCAGACAGAGAGCGTAAGAGAAGAGCAGCCCTTTCTATGCCGTaGAGTTTATGGCGGTGCTTC +
Preference number: 5 (lower is better)
Translates to: KALRTPDVQPDRERKRRAALSMP*SLWRCF
Trigger: GAAGCACCGCCATAAACTCAACGGCATAGAAAGGGC...TGCTCTTCTCTTACGCTCTCTGTCTGGCTGTACGTCTGGTGTTCTCAATGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp AGAACACCAGACGTACAGCCAGACAGAGAGCGTAAGAGAAGAGCAGATGCTATTTTCCAGGTGACTGAGTaGGCCCTTTCTATGCCGTTG +
Preference number: 5 (lower is better)
Translates to: RTPDVQPDRERKRRADAIFQVTE*ALSMPL
Trigger: CAACGGCATAGAAAGGGCCAACTCAGTCACCTGGAA...AATAGCATCTGCTCTTCTCTTACGCTCTCTGTCTGGCTGTACGTCTGGTGTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp AAAGCATTGAGAACACCAGACGTACAGCCAGACAGAGAGCGTAAGAGAAGAGCACACATCAGCCAGAACTaGAAGATATCCACGTGGCGG +
Preference number: 5 (lower is better)
Translates to: KALRTPDVQPDRERKRRAHISQN*KISTWR
Trigger: CCGCCACGTGGATATCTTCAAGTTCTGGCTGATGTG...TGCTCTTCTCTTACGCTCTCTGTCTGGCTGTACGTCTGGTGTTCTCAATGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp TCATCCATCATCACTTCAGGTGGAGAAACGCTGACAGTGAGGTCGATTCTCACCGCAACATATAGAGGTTaGTTCTGGAGTGCCAGAGGG +
Preference number: 5 (lower is better)
Translates to: SSIITSGGETLTVRSILTATYRG*FWSARG
Trigger: CCCTCTGGCACTCCAGAACAAACCTCTATATGTTGC...GGTGAGAATCGACCTCACTGTCAGCGTTTCTCCACCTGAAGTGATGATGGATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp TCATACTGCTTGTCTGGCTGGAAGAGGTATCCTGCACACATCTGGTTGCATCCTGCAACATATAGAGGTTaGTTCTGGAGTGCCAGAGGG +
Preference number: 5 (lower is better)
Translates to: SYCLSGWKRYPAHIWLHPATYRG*FWSARG
Trigger: CCCTCTGGCACTCCAGAACAAACCTCTATATGTTGC...AGGATGCAACCAGATGTGTGCAGGATACCTCTTCCAGCCAGACAAGCAGTATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp GGTCTTCGGAAATGTTGCCTTAGGTTTCAGCTAAGCGAGTCACAGAGATTGGTCGTTTTCCTGGAGTTGTaGGACAAGCTGGTTGGCAGC +
Preference number: 5 (lower is better)
Translates to: GLRKCCLRFQLSESQRLVVFLEL*DKLVGS
Trigger: GCTGCCAACCAGCTTGTCCAACAACTCCAGGAAAAC...GACCAATCTCTGTGACTCGCTTAGCTGAAACCTAAGGCAACATTTCCGAAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS TCA 90 bp GGGAGGTGTTGGGGCTCTTTGATTATTGTTTCTAAAAACGAACGCTaGGCTGGTGTCTCAAGAGACAAGGGAGGTCAGGAAGCGAAAGGA +
Preference number: 5 (lower is better)
Translates to: GRCWGSLIIVSKNER*AGVSRDKGGQEAKG
Trigger: TCCTTTCGCTTCCTGACCTCCCTTGTCTCTTGAGACACCAGCTCAGCGTTCGTTTTTAGAAACAATAATCAAAGAGCCCCAACACCTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462739.1
CDS CCA 90 bp TGGTGCAATTTCATATGTAAACCTCTGGAGGTCACAATCATGCTTTaGTTCTGCTCTGAGCCCCATCACCGTAGCAACCAACACTCCCTC +
Preference number: 5 (lower is better)
Translates to: WCNFICKPLEVTIML*FCSEPHHRSNQHSL
Trigger: GAGGGAGTGTTGGTTGCTACGGTGATGGGGCTCAGAGCAGAACCAAAGCATGATTGTGACCTCCAGAGGTTTACATATGAAATTGCACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429023.1
CDS CCA 90 bp GGTGTCTGGGATTGTTTCAAGATTGGGAAGTGCTACGGCATTCAGTaGGCCAGGGTTAGAGATAGAAAATTCCTCAGTGGGTGGGATAGT +
Preference number: 5 (lower is better)
Translates to: GVWDCFKIGKCYGIQ*ARVRDRKFLSGWDS
Trigger: ACTATCCCACCCACTGAGGAATTTTCTATCTCTAACCCTGGCCCACTGAATGCCGTAGCACTTCCCAATCTTGAAACAATCCCAGACACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478562.1
CDS-3UTR CAA 90 bp CTTAGGTTTCAGCTAAGCGAGTCACAGAGATTGGTCATCAACTACTACAAAATTCGCAGGTTAGTGGTATaGGGGTCCGCTCCCGCGTTC +
Preference number: 5 (lower is better)
Translates to: LRFQLSESQRLVINYYKIRRLVV*GSAPAF
Trigger: GAACGCGGGAGCGGACCCCAATACCACTAACCTGCG...AATTTTGTAGTAGTTGATGACCAATCTCTGTGACTCGCTTAGCTGAAACCTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp AAACCATGTGTGCAGTTACCATCACCTCTGGAGGTCACAATCATGCTTTGGTTCCAGGCTGTTGGTCCTTaGCAAGAAGCCGCAGATCTT +
Preference number: 5 (lower is better)
Translates to: KPCVQLPSPLEVTIMLWFQAVGP*QEAADL
Trigger: AAGATCTGCGGCTTCTTGCAAAGGACCAACAGCCTG...GAACCAAAGCATGATTGTGACCTCCAGAGGTGATGGTAACTGCACACATGGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344257.9
ENST00000375272.5
CDS-3UTR CAA 90 bp CGGAAATGTTGCCTTAGGTTTCAGCTAAGCGAGTCACAGAGATTGGTCATCAACTTCTCTTCCAGGCTGTaGGTCCTTTGCAAGAAGCCG +
Preference number: 5 (lower is better)
Translates to: RKCCLRFQLSESQRLVINFSSRL*VLCKKP
Trigger: CGGCTTCTTGCAAAGGACCAACAGCCTGGAAGAGAA...GTTGATGACCAATCTCTGTGACTCGCTTAGCTGAAACCTAAGGCAACATTTCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp AACCATGTGTGCAGTTACCATCACCTCTGGAGGTCACAATCATGCTTTGGTTCTTTCTCTTCCAGGCTGTaGGTCCTTTGCAAGAAGCCG +
Preference number: 5 (lower is better)
Translates to: NHVCSYHHLWRSQSCFGSFSSRL*VLCKKP
Trigger: CGGCTTCTTGCAAAGGACCAACAGCCTGGAAGAGAA...AGAACCAAAGCATGATTGTGACCTCCAGAGGTGATGGTAACTGCACACATGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344257.9
ENST00000375272.5
CDS-3UTR CAA 90 bp AACCATGTGTGCAGTTACCATCACCTCTGGAGGTCACAATCATGCTTTGGTTCTCAGGTTCTTGGAGGATaGCCTCTCCTTGAAGGCACT +
Preference number: 5 (lower is better)
Translates to: NHVCSYHHLWRSQSCFGSQVLGG*PLLEGT
Trigger: AGTGCCTTCAAGGAGAGGCAATCCTCCAAGAACCTG...AGAACCAAAGCATGATTGTGACCTCCAGAGGTGATGGTAACTGCACACATGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344257.9
ENST00000375272.5
CDS-3UTR CAA 90 bp AAAGAATATGTCCATTTTCCTTGGGAGGCCCCTGGAAATTTAGGAGGAAGACCCGAGGAATTGCACGGTTaGCTCCTCACCGTTCTTAGC +
Preference number: 5 (lower is better)
Translates to: KEYVHFPWEAPGNLGGRPEELHG*LLTVLS
Trigger: GCTAAGAACGGTGAGGAGCAAACCGTGCAATTCCTC...GGGTCTTCCTCCTAAATTTCCAGGGGCCTCCCAAGGAAAATGGACATATTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344257.9
ENST00000375272.5
CDS-3UTR CAA 90 bp TTTCCTTGGGAGGCCCCTGGAAATTTAGGAGGAAGACCCTTGGAAACCATGTGTTTAGGAGGAAGACCCTaGGAAACCATGTGTGCAGTT +
Preference number: 5 (lower is better)
Translates to: FPWEAPGNLGGRPLETMCLGGRP*ETMCAV
Trigger: AACTGCACACATGGTTTCCAAGGGTCTTCCTCCTAA...ACACATGGTTTCCAAGGGTCTTCCTCCTAAATTTCCAGGGGCCTCCCAAGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344257.9
ENST00000375272.5
CDS-3UTR CAA 90 bp CGGAAATGTTGCCTTAGGTTTCAGCTAAGCGAGTCACAGAGATTGGTCATCAACTTCCAGGTGACTGAGTaGGCCCTTTCTATGCCGTTG +
Preference number: 5 (lower is better)
Translates to: RKCCLRFQLSESQRLVINFQVTE*ALSMPL
Trigger: CAACGGCATAGAAAGGGCCAACTCAGTCACCTGGAA...GTTGATGACCAATCTCTGTGACTCGCTTAGCTGAAACCTAAGGCAACATTTCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp CCTGAGGCTTTGTGGAATATACCAAAAACAGACGTTTGTGTGCTCAGGCTCGCCGAGACATCATACTGCTaGTCTGGCTGGAAGAGGTAT +
Preference number: 5 (lower is better)
Translates to: PEALWNIPKTDVCVLRLAETSYC*SGWKRY
Trigger: ATACCTCTTCCAGCCAGACAAGCAGTATGATGTCTC...GGCGAGCCTGAGCACACAAACGTCTGTTTTTGGTATATTCCACAAAGCCTCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp CGGAAATGTTGCCTTAGGTTTCAGCTAAGCGAGTCACAGAGATTGGTCATCAACATCCCACTGTGCCCTTaGCTTTCCACATCAGCCAGA +
Preference number: 5 (lower is better)
Translates to: RKCCLRFQLSESQRLVINIPLCP*LSTSAR
Trigger: TCTGGCTGATGTGGAAAGCAAAGGGCACAGTGGGAT...GTTGATGACCAATCTCTGTGACTCGCTTAGCTGAAACCTAAGGCAACATTTCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp CTTTCTATGCCGTTGAGTTTATGGCGGTGCTTCCTGGACATGAGCAGCCCACCTAGTTCCAGGCATTTGTaGATCTGGTTTTCAAATCCC +
Preference number: 5 (lower is better)
Translates to: LSMPLSLWRCFLDMSSPPSSRHL*IWFSNP
Trigger: GGGATTTGAAAACCAGATCAACAAATGCCTGGAACT...AGGTGGGCTGCTCATGTCCAGGAAGCACCGCCATAAACTCAACGGCATAGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414527.6
CDS-3UTR CAA 90 bp AAAGCATTGAGAACACCAGACGTACAGCCAGACAGAGAGCGTAAGAGAAGAGCAACCAAAAACAGACGTTaGTGTGCTCAGGCTCGCCAT +
Preference number: 5 (lower is better)
Translates to: KALRTPDVQPDRERKRRATKNRR*CAQARH
Trigger: ATGGCGAGCCTGAGCACACAAACGTCTGTTTTTGGT...TGCTCTTCTCTTACGCTCTCTGTCTGGCTGTACGTCTGGTGTTCTCAATGCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp GGCATTCCCATAAACTCATGTTCTGCGAAGGATGATTACAGATCCTGGCCCAGTACCAAAAACAGACGTTaGTGTGCTCAGGCTCGCCAT +
Preference number: 5 (lower is better)
Translates to: GIPINSCSAKDDYRSWPSTKNRR*CAQARH
Trigger: ATGGCGAGCCTGAGCACACAAACGTCTGTTTTTGGT...ACTGGGCCAGGATCTGTAATCATCCTTCGCAGAACATGAGTTTATGGGAATGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp TCATCCATCATCACTTCAGGTGGAGAAACGCTGACAGTGAGGTCGATTCTCACCATTTTTGGAGCCACCTaGTGTAGCTTTTCCCGTCGT +
Preference number: 5 (lower is better)
Translates to: SSIITSGGETLTVRSILTIFGAT*CSFSRR
Trigger: ACGACGGGAAAAGCTACACAAGGTGGCTCCAAAAAT...GGTGAGAATCGACCTCACTGTCAGCGTTTCTCCACCTGAAGTGATGATGGATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp CCCCTGAGGCTTTGTGGAATATACCAAAAACAGACGTTTGTGTGCTCAGGCTCGATTTTTGGAGCCACCTaGTGTAGCTTTTCCCGTCGT +
Preference number: 5 (lower is better)
Translates to: PLRLCGIYQKQTFVCSGSIFGAT*CSFSRR
Trigger: ACGACGGGAAAAGCTACACAAGGTGGCTCCAAAAAT...CGAGCCTGAGCACACAAACGTCTGTTTTTGGTATATTCCACAAAGCCTCAGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp TCATACTGCTTGTCTGGCTGGAAGAGGTATCCTGCACACATCTGGTTGCATCCTATTTTTGGAGCCACCTaGTGTAGCTTTTCCCGTCGT +
Preference number: 5 (lower is better)
Translates to: SYCLSGWKRYPAHIWLHPIFGAT*CSFSRR
Trigger: ACGACGGGAAAAGCTACACAAGGTGGCTCCAAAAAT...AGGATGCAACCAGATGTGTGCAGGATACCTCTTCCAGCCAGACAAGCAGTATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp CCCCTGAGGCTTTGTGGAATATACCAAAAACAGACGTTTGTGTGCTCAGGCTCGTCCATCATCAGGGCTTaGATTTTTGGAGCCACCTTG +
Preference number: 5 (lower is better)
Translates to: PLRLCGIYQKQTFVCSGSSIIRA*IFGATL
Trigger: CAAGGTGGCTCCAAAAATCAAAGCCCTGATGATGGA...CGAGCCTGAGCACACAAACGTCTGTTTTTGGTATATTCCACAAAGCCTCAGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp CCCTTTCATTGCACTTTATCAAAATCACATTGTCAGTTCCAAAGCCAAGTGCAGGTTGGCCTTGTCCCCTaGGGGCTGGTAGCCAACCAT +
Preference number: 5 (lower is better)
Translates to: PFHCTLSKSHCQFQSQVQVGLVP*GLVANH
Trigger: ATGGTTGGCTACCAGCCCCAAGGGGACAAGGCCAAC...CTGCACTTGGCTTTGGAACTGACAATGTGATTTTGATAAAGTGCAATGAAAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000414527.6
CDS-3UTR CAA 90 bp GAACACCAGACGTACAGCCAGACAGAGAGCGTAAGAGAAGAGCAGATGCTATTTTGTTGGACAAGCTGGTaGGCAGCATGTTTAGCTCCT +
Preference number: 5 (lower is better)
Translates to: EHQTYSQTESVREEQMLFCWTSW*AACLAP
Trigger: AGGAGCTAAACATGCTGCCAACCAGCTTGTCCAACA...AAATAGCATCTGCTCTTCTCTTACGCTCTCTGTCTGGCTGTACGTCTGGTGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp AGAACACCAGACGTACAGCCAGACAGAGAGCGTAAGAGAAGAGCAGATGCTATTTGTTGGACAAGCTGGTaGGCAGCATGTTTAGCTCCT +
Preference number: 5 (lower is better)
Translates to: RTPDVQPDRERKRRADAICWTSW*AACLAP
Trigger: AGGAGCTAAACATGCTGCCAACCAGCTTGTCCAACA...AATAGCATCTGCTCTTCTCTTACGCTCTCTGTCTGGCTGTACGTCTGGTGTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp GGTCGATTCTCACCAACAGCATTTCCCTCGGCCCCTAGGACATGGCGTTTTGAACTAGGACATGGCGTTTaGAAAAACAGTTTTCCTGGA +
Preference number: 5 (lower is better)
Translates to: GRFSPTAFPSAPRTWRFELGHGV*KNSFPG
Trigger: TCCAGGAAAACTGTTTTTCAAAACGCCATGTCCTAG...TTCAAAACGCCATGTCCTAGGGGCCGAGGGAAATGCTGTTGGTGAGAATCGACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS TCA 90 bp TGGAGCAACAAAGCCTTGGAGGGCAGGATCCTAACATTAGGCATGTaGAGAAGGGAATATGAGGCTCAACCATTTACAGCAGCTTTTGGG +
Preference number: 5 (lower is better)
Translates to: WSNKALEGRILTLGM*RREYEAQPFTAAFG
Trigger: CCCAAAAGCTGCTGTAAATGGTTGAGCCTCATATTCCCTTCTTCACATGCCTAATGTTAGGATCCTGCCCTCCAAGGCTTTGTTGCTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478562.1
CDS GCA 90 bp GTCGTAGGAGACATCATACTGCTTGTCTGGCTGGAAGAGGTATCCTaGACACATCTGGTTGCATCCTTGGAGTATACCCTATCATGGAAA +
Preference number: 5 (lower is better)
Translates to: VVGDIILLVWLEEVS*THLVASLEYTLSWK
Trigger: TTTCCATGATAGGGTATACTCCAAGGATGCAACCAGATGTGTGCAGGATACCTCTTCCAGCCAGACAAGCAGTATGATGTCTCCTACGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478562.1
CDS CCA 90 bp TGGAAATGCATTAAGTCGCCGATCATAAAATGTCAGAAACCAGCCTaGGTTACTGAGAGAGGTGGTGGAAGTGCCAGCCCTGTGATACTT +
Preference number: 5 (lower is better)
Translates to: WKCIKSPIIKCQKPA*VTERGGGSASPVIL
Trigger: AAGTATCACAGGGCTGGCACTTCCACCACCTCTCTCAGTAACCCAGGCTGGTTTCTGACATTTTATGATCGGCGACTTAATGCATTTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462739.1
CDS CCA 90 bp TTGGCCCTGAAAGAAGCACATGAGACTTCGAGAAGGTGCAGGAGTTaGAAAGACGCAACTGTTCTCTTGAGGAAAACACCCATTCCAACT +
Preference number: 5 (lower is better)
Translates to: LALKEAHETSRRCRS*KDATVLLRKTPIPT
Trigger: AGTTGGAATGGGTGTTTTCCTCAAGAGAACAGTTGCGTCTTTCCAACTCCTGCACCTTCTCGAAGTCTCATGTGCTTCTTTCAGGGCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478562.1
CDS CCA 90 bp CTTTCCAGGACCTCCTATGACATTAACATGGATTCCACATATGAGTaGACTAAAGACGCTGTGCAGATTCTGGCTCCTACAGGCTGGAGA +
Preference number: 5 (lower is better)
Translates to: LSRTSYDINMDSTYE*TKDAVQILAPTGWR
Trigger: TCTCCAGCCTGTAGGAGCCAGAATCTGCACAGCGTCTTTAGTCCACTCATATGTGGAATCCATGTTAATGTCATAGGAGGTCCTGGAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478562.1
CDS-3UTR CAA 90 bp TGTGTGCAGTTACCATCACCTCTGGAGGTCACAATCATGCTTTGGTTCTGCTCTATGTCTGATGGCATGTaGGTATTGGCCGTTGATGTC +
Preference number: 5 (lower is better)
Translates to: CVQLPSPLEVTIMLWFCSMSDGM*VLAVDV
Trigger: GACATCAACGGCCAATACCAACATGCCATCAGACAT...AGAGCAGAACCAAAGCATGATTGTGACCTCCAGAGGTGATGGTAACTGCACACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344257.9
ENST00000375272.5
CDS-3UTR CAA 90 bp TTTCCTTGGGAGGCCCCTGGAAATTTAGGAGGAAGACCCTTGGAAACCATGTGTATATGTCCATTTTCCTaGGGAGGCCCCTGGAAATTT +
Preference number: 5 (lower is better)
Translates to: FPWEAPGNLGGRPLETMCICPFS*GGPWKF
Trigger: AAATTTCCAGGGGCCTCCCAAGGAAAATGGACATAT...ACACATGGTTTCCAAGGGTCTTCCTCCTAAATTTCCAGGGGCCTCCCAAGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344257.9
ENST00000375272.5
CDS-3UTR CAA 90 bp CCATTTTCCTTGGGAGGCCCCTGGAAATTTAGGAGGAAGACCCTTGGAAACCATATATGTCCATTTTCCTaGGGAGGCCCCTGGAAATTT +
Preference number: 5 (lower is better)
Translates to: PFSLGGPWKFRRKTLGNHICPFS*GGPWKF
Trigger: AAATTTCCAGGGGCCTCCCAAGGAAAATGGACATAT...ATGGTTTCCAAGGGTCTTCCTCCTAAATTTCCAGGGGCCTCCCAAGGAAAATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000344257.9
ENST00000375272.5
CDS-3UTR CAA 90 bp GGTCGATTCTCACCAACAGCATTTCCCTCGGCCCCTAGGACATGGCGTTTTGAATCATATGTAAACATGTaGGTATTGGCCGTTGATGTC +
Preference number: 5 (lower is better)
Translates to: GRFSPTAFPSAPRTWRFESYVNM*VLAVDV
Trigger: GACATCAACGGCCAATACCAACATGTTTACATATGA...TTCAAAACGCCATGTCCTAGGGGCCGAGGGAAATGCTGTTGGTGAGAATCGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp GGCATTCCCATAAACTCATGTTCTGCGAAGGATGATTACAGATCCTGGCCCAGTAGTATACCCTTTTCCTaGACGAGAATGGCAGAGCAC +
Preference number: 5 (lower is better)
Translates to: GIPINSCSAKDDYRSWPSSIPFS*TRMAEH
Trigger: GTGCTCTGCCATTCTCGTCAAGGAAAAGGGTATACT...ACTGGGCCAGGATCTGTAATCATCCTTCGCAGAACATGAGTTTATGGGAATGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp AAAGCATTGAGAACACCAGACGTACAGCCAGACAGAGAGCGTAAGAGAAGAGCAGAGACATCATACTGCTaGTCTGGCTGGAAGAGGTAT +
Preference number: 5 (lower is better)
Translates to: KALRTPDVQPDRERKRRAETSYC*SGWKRY
Trigger: ATACCTCTTCCAGCCAGACAAGCAGTATGATGTCTC...TGCTCTTCTCTTACGCTCTCTGTCTGGCTGTACGTCTGGTGTTCTCAATGCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp GCTTTGTGGAATATACCAAAAACAGACGTTTGTGTGCTCAGGCTCGCCATTGAACACATCAGCCAGAACTaGAAGATATCCACGTGGCGG +
Preference number: 5 (lower is better)
Translates to: ALWNIPKTDVCVLRLAIEHISQN*KISTWR
Trigger: CCGCCACGTGGATATCTTCAAGTTCTGGCTGATGTG...TTCAATGGCGAGCCTGAGCACACAAACGTCTGTTTTTGGTATATTCCACAAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp CCCCTGAGGCTTTGTGGAATATACCAAAAACAGACGTTTGTGTGCTCAGGCTCGTGCTCAGGCTCGCCATaGAAAACCATCTCAAATTCT +
Preference number: 5 (lower is better)
Translates to: PLRLCGIYQKQTFVCSGSCSGSP*KTISNS
Trigger: AGAATTTGAGATGGTTTTCAATGGCGAGCCTGAGCA...CGAGCCTGAGCACACAAACGTCTGTTTTTGGTATATTCCACAAAGCCTCAGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp CATACTGCTTGTCTGGCTGGAAGAGGTATCCTGCACACATCTGGTTGCATCCTTTGCTCAGGCTCGCCATaGAAAACCATCTCAAATTCT +
Preference number: 5 (lower is better)
Translates to: HTACLAGRGILHTSGCILCSGSP*KTISNS
Trigger: AGAATTTGAGATGGTTTTCAATGGCGAGCCTGAGCA...AAGGATGCAACCAGATGTGTGCAGGATACCTCTTCCAGCCAGACAAGCAGTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp GGAGACATCATACTGCTTGTCTGGCTGGAAGAGGTATCCTGCACACATCTGGTTCACACCCCTGAGGCTTaGTGGAATATACCAAAAACA +
Preference number: 5 (lower is better)
Translates to: GDIILLVWLEEVSCTHLVHTPEA*WNIPKT
Trigger: TGTTTTTGGTATATTCCACAAAGCCTCAGGGGTGTG...AACCAGATGTGTGCAGGATACCTCTTCCAGCCAGACAAGCAGTATGATGTCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp CTGAGGCTTTGTGGAATATACCAAAAACAGACGTTTGTGTGCTCAGGCTCGCCAATTTTTGGAGCCACCTaGTGTAGCTTTTCCCGTCGT +
Preference number: 5 (lower is better)
Translates to: LRLCGIYQKQTFVCSGSPIFGAT*CSFSRR
Trigger: ACGACGGGAAAAGCTACACAAGGTGGCTCCAAAAAT...TGGCGAGCCTGAGCACACAAACGTCTGTTTTTGGTATATTCCACAAAGCCTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS TCA 90 bp CATCAGTGGCAGAGGCCCAGTCATGCAAGAGAGAAAAACAGTAAGTaGAGCCCGTTCTCCTCTCTGAATGTGACAGTGAACTCACAATTA +
Preference number: 5 (lower is better)
Translates to: HQWQRPSHAREKNSK*SPFSSLNVTVNSQL
Trigger: TAATTGTGAGTTCACTGTCACATTCAGAGAGGAGAACGGGCTTCACTTACTGTTTTTCTCTCTTGCATGACTGGGCCTCTGCCACTGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493270.1
CDS GCA 90 bp AATTTCATATGTAAACCTCTGGAGGTCACAATCATGCTTTGGTTCTaGTCTGAGCCCCATCACCGTAGCAACCAACACTCCCTCATGTCT +
Preference number: 5 (lower is better)
Translates to: NFICKPLEVTIMLWF*SEPHHRSNQHSLMS
Trigger: AGACATGAGGGAGTGTTGGTTGCTACGGTGATGGGGCTCAGAGCAGAACCAAAGCATGATTGTGACCTCCAGAGGTTTACATATGAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429023.1
CDS-3UTR CAA 90 bp GAGTTGACTTTTATTGACTGCCTTCATCCAGTTTCCAAAATGATGGAGACCTGGCAGGCTGTTGGTCCTTaGCAAGAAGCCGCAGATCTT +
Preference number: 5 (lower is better)
Translates to: ELTFIDCLHPVSKMMETWQAVGP*QEAADL
Trigger: AAGATCTGCGGCTTCTTGCAAAGGACCAACAGCCTG...CCAGGTCTCCATCATTTTGGAAACTGGATGAAGGCAGTCAATAAAAGTCAACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486850.1
CDS-3UTR CAA 90 bp GAGTTGACTTTTATTGACTGCCTTCATCCAGTTTCCAAAATGATGGAGACCTGGCAGGTTCTTGGAGGATaGCCTCTCCTTGAAGGCACT +
Preference number: 5 (lower is better)
Translates to: ELTFIDCLHPVSKMMETWQVLGG*PLLEGT
Trigger: AGTGCCTTCAAGGAGAGGCAATCCTCCAAGAACCTG...CCAGGTCTCCATCATTTTGGAAACTGGATGAAGGCAGTCAATAAAAGTCAACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486850.1
CDS-3UTR CAA 90 bp AACCATGTGTGCAGTTACCATCACCTCTGGAGGTCACAATCATGCTTTGGTTCTTTAGGAGGAAGACCCTaGGAAACCATGTGTGCAGTT +
Preference number: 5 (lower is better)
Translates to: NHVCSYHHLWRSQSCFGSLGGRP*ETMCAV
Trigger: AACTGCACACATGGTTTCCAAGGGTCTTCCTCCTAA...AGAACCAAAGCATGATTGTGACCTCCAGAGGTGATGGTAACTGCACACATGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344257.9
ENST00000375272.5
CDS-3UTR CAA 90 bp CGGAAATGTTGCCTTAGGTTTCAGCTAAGCGAGTCACAGAGATTGGTCATCAACAGTATACCCTTTTCCTaGACGAGAATGGCAGAGCAC +
Preference number: 5 (lower is better)
Translates to: RKCCLRFQLSESQRLVINSIPFS*TRMAEH
Trigger: GTGCTCTGCCATTCTCGTCAAGGAAAAGGGTATACT...GTTGATGACCAATCTCTGTGACTCGCTTAGCTGAAACCTAAGGCAACATTTCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp ATAAACTCATGTTCTGCGAAGGATGATTACAGATCCTGGCCCAGTCTTTCTATCATCCCACTGTGCCCTTaGCTTTCCACATCAGCCAGA +
Preference number: 5 (lower is better)
Translates to: INSCSAKDDYRSWPSLSIIPLCP*LSTSAR
Trigger: TCTGGCTGATGTGGAAAGCAAAGGGCACAGTGGGAT...GATAGAAAGACTGGGCCAGGATCTGTAATCATCCTTCGCAGAACATGAGTTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp CATACTGCTTGTCTGGCTGGAAGAGGTATCCTGCACACATCTGGTTGCATCCTTGCCAGTTCCAGGCATTaGTTGATCTGGTTTTCAAAT +
Preference number: 5 (lower is better)
Translates to: HTACLAGRGILHTSGCILASSRH*LIWFSN
Trigger: ATTTGAAAACCAGATCAACAAATGCCTGGAACTGGC...AAGGATGCAACCAGATGTGTGCAGGATACCTCTTCCAGCCAGACAAGCAGTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp AGAACACCAGACGTACAGCCAGACAGAGAGCGTAAGAGAAGAGCAGATGCTATTTGCTCAGGCTCGCCATaGAAAACCATCTCAAATTCT +
Preference number: 5 (lower is better)
Translates to: RTPDVQPDRERKRRADAICSGSP*KTISNS
Trigger: AGAATTTGAGATGGTTTTCAATGGCGAGCCTGAGCA...AATAGCATCTGCTCTTCTCTTACGCTCTCTGTCTGGCTGTACGTCTGGTGTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp ACAATCATTGAAATCATGACACATAGTCTCCCCCTCCCACCACCAAGGTCAGACCACACCCCTGAGGCTTaGTGGAATATACCAAAAACA +
Preference number: 5 (lower is better)
Translates to: TIIEIMTHSLPLPPPRSDHTPEA*WNIPKT
Trigger: TGTTTTTGGTATATTCCACAAAGCCTCAGGGGTGTG...GTCTGACCTTGGTGGTGGGAGGGGGAGACTATGTGTCATGATTTCAATGATTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp CCTGAGGCTTTGTGGAATATACCAAAAACAGACGTTTGTGTGCTCAGGCTCGCCCTAGGACATGGCGTTTaGAAAAACAGTTTTCCTGGA +
Preference number: 5 (lower is better)
Translates to: PEALWNIPKTDVCVLRLALGHGV*KNSFPG
Trigger: TCCAGGAAAACTGTTTTTCAAAACGCCATGTCCTAG...GGCGAGCCTGAGCACACAAACGTCTGTTTTTGGTATATTCCACAAAGCCTCAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp AAAGCATTGAGAACACCAGACGTACAGCCAGACAGAGAGCGTAAGAGAAGAGCAGTTGCTAGAAAAGCATaGAGAACACCAGACGTACAG +
Preference number: 5 (lower is better)
Translates to: KALRTPDVQPDRERKRRAVARKA*RTPDVQ
Trigger: CTGTACGTCTGGTGTTCTCAATGCTTTTCTAGCAAC...TGCTCTTCTCTTACGCTCTCTGTCTGGCTGTACGTCTGGTGTTCTCAATGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp GGTCTTCGGAAATGTTGCCTTAGGTTTCAGCTAAGCGAGTCACAGAGATTGGTCGTTGCTAGAAAAGCATaGAGAACACCAGACGTACAG +
Preference number: 5 (lower is better)
Translates to: GLRKCCLRFQLSESQRLVVARKA*RTPDVQ
Trigger: CTGTACGTCTGGTGTTCTCAATGCTTTTCTAGCAAC...GACCAATCTCTGTGACTCGCTTAGCTGAAACCTAAGGCAACATTTCCGAAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp TCATCCATCATCACTTCAGGTGGAGAAACGCTGACAGTGAGGTCGATTCTCACCCACGTGACACAGCCTTaGTTAGTCATTAGTTCAGTA +
Preference number: 5 (lower is better)
Translates to: SSIITSGGETLTVRSILTHVTQP*LVISSV
Trigger: TACTGAACTAATGACTAACAAAGGCTGTGTCACGTG...GGTGAGAATCGACCTCACTGTCAGCGTTTCTCCACCTGAAGTGATGATGGATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp CATACTGCTTGTCTGGCTGGAAGAGGTATCCTGCACACATCTGGTTGCATCCTTCACGTGACACAGCCTTaGTTAGTCATTAGTTCAGTA +
Preference number: 5 (lower is better)
Translates to: HTACLAGRGILHTSGCILHVTQP*LVISSV
Trigger: TACTGAACTAATGACTAACAAAGGCTGTGTCACGTG...AAGGATGCAACCAGATGTGTGCAGGATACCTCTTCCAGCCAGACAAGCAGTATG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493875.5
ENST00000625689.2
CDS TCA 90 bp CTTGGAGGGCAGGATCCTAACATTAGGCATGTGAAGAAGGGAATATaGGGCTCAACCATTTACAGCAGCTTTTGGGGCAATATTCCTTGT +
Preference number: 5 (lower is better)
Translates to: LGGQDPNIRHVKKGI*GSTIYSSFWGNIPC
Trigger: ACAAGGAATATTGCCCCAAAAGCTGCTGTAAATGGTTGAGCCTCATATTCCCTTCTTCACATGCCTAATGTTAGGATCCTGCCCTCCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478562.1
CDS CCA 90 bp GGCAAAAGTCTTCCAACCTTTCCAGGACCTCCTATGACATTAACATaGATTCCACATATGAGTGGACTAAAGACGCTGTGCAGATTCTGG +
Preference number: 5 (lower is better)
Translates to: GKSLPTFPGPPMTLT*IPHMSGLKTLCRFW
Trigger: CCAGAATCTGCACAGCGTCTTTAGTCCACTCATATGTGGAATCCATGTTAATGTCATAGGAGGTCCTGGAAAGGTTGGAAGACTTTTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478562.1
CDS-3UTR CAA 90 bp GAACACCAGACGTACAGCCAGACAGAGAGCGTAAGAGAAGAGCAGATGCTATTTCATCACCATCTTTACTaGACCATCCAACTATCTCTC +
Preference number: 5 (lower is better)
Translates to: EHQTYSQTESVREEQMLFHHHLY*TIQLSL
Trigger: GAGAGATAGTTGGATGGTCAAGTAAAGATGGTGATG...AAATAGCATCTGCTCTTCTCTTACGCTCTCTGTCTGGCTGTACGTCTGGTGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp GCTTTGTGGAATATACCAAAAACAGACGTTTGTGTGCTCAGGCTCGCCATTGAAAGTATACCCTTTTCCTaGACGAGAATGGCAGAGCAC +
Preference number: 5 (lower is better)
Translates to: ALWNIPKTDVCVLRLAIESIPFS*TRMAEH
Trigger: GTGCTCTGCCATTCTCGTCAAGGAAAAGGGTATACT...TTCAATGGCGAGCCTGAGCACACAAACGTCTGTTTTTGGTATATTCCACAAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp TGCACTTTATCAAAATCACATTGTCAGTTCCAAAGCCAAGTGCAGCCCCAGCTTGAGACATCATACTGCTaGTCTGGCTGGAAGAGGTAT +
Preference number: 5 (lower is better)
Translates to: CTLSKSHCQFQSQVQPQLETSYC*SGWKRY
Trigger: ATACCTCTTCCAGCCAGACAAGCAGTATGATGTCTC...AAGCTGGGGCTGCACTTGGCTTTGGAACTGACAATGTGATTTTGATAAAGTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414527.6
CDS-3UTR CAA 90 bp ACAATCATTGAAATCATGACACATAGTCTCCCCCTCCCACCACCAAGGTCAGACAGTTCCAGGCATTTGTaGATCTGGTTTTCAAATCCC +
Preference number: 5 (lower is better)
Translates to: TIIEIMTHSLPLPPPRSDSSRHL*IWFSNP
Trigger: GGGATTTGAAAACCAGATCAACAAATGCCTGGAACT...GTCTGACCTTGGTGGTGGGAGGGGGAGACTATGTGTCATGATTTCAATGATTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp GGTCTTCGGAAATGTTGCCTTAGGTTTCAGCTAAGCGAGTCACAGAGATTGGTCGCCAGTTCCAGGCATTaGTTGATCTGGTTTTCAAAT +
Preference number: 5 (lower is better)
Translates to: GLRKCCLRFQLSESQRLVASSRH*LIWFSN
Trigger: ATTTGAAAACCAGATCAACAAATGCCTGGAACTGGC...GACCAATCTCTGTGACTCGCTTAGCTGAAACCTAAGGCAACATTTCCGAAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp CTGAGGCTTTGTGGAATATACCAAAAACAGACGTTTGTGTGCTCAGGCTCGCCAGCCAGTTCCAGGCATTaGTTGATCTGGTTTTCAAAT +
Preference number: 5 (lower is better)
Translates to: LRLCGIYQKQTFVCSGSPASSRH*LIWFSN
Trigger: ATTTGAAAACCAGATCAACAAATGCCTGGAACTGGC...TGGCGAGCCTGAGCACACAAACGTCTGTTTTTGGTATATTCCACAAAGCCTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp CGGAAATGTTGCCTTAGGTTTCAGCTAAGCGAGTCACAGAGATTGGTCATCAACCACACCCCTGAGGCTTaGTGGAATATACCAAAAACA +
Preference number: 5 (lower is better)
Translates to: RKCCLRFQLSESQRLVINHTPEA*WNIPKT
Trigger: TGTTTTTGGTATATTCCACAAAGCCTCAGGGGTGTG...GTTGATGACCAATCTCTGTGACTCGCTTAGCTGAAACCTAAGGCAACATTTCCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp ATCTGCAATCTCTTGTATCGGATCAAAAGCTCCATAAACAGTCGTGCCAGCAGTTCCATCATCAGGGCTTaGATTTTTGGAGCCACCTTG +
Preference number: 5 (lower is better)
Translates to: ICNLLYRIKSSINSRASSSIIRA*IFGATL
Trigger: CAAGGTGGCTCCAAAAATCAAAGCCCTGATGATGGA...ACTGCTGGCACGACTGTTTATGGAGCTTTTGATCCGATACAAGAGATTGCAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000414527.6
CDS-3UTR CAA 90 bp GAACACCAGACGTACAGCCAGACAGAGAGCGTAAGAGAAGAGCAGATGCTATTTCTAGGACATGGCGTTTaGAAAAACAGTTTTCCTGGA +
Preference number: 5 (lower is better)
Translates to: EHQTYSQTESVREEQMLFLGHGV*KNSFPG
Trigger: TCCAGGAAAACTGTTTTTCAAAACGCCATGTCCTAG...AAATAGCATCTGCTCTTCTCTTACGCTCTCTGTCTGGCTGTACGTCTGGTGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp GAACACCAGACGTACAGCCAGACAGAGAGCGTAAGAGAAGAGCAGATGCTATTTAGCGAGTCACAGAGATaGGTCATCAACTACTACAAA +
Preference number: 5 (lower is better)
Translates to: EHQTYSQTESVREEQMLFSESQR*VINYYK
Trigger: TTTGTAGTAGTTGATGACCAATCTCTGTGACTCGCT...AAATAGCATCTGCTCTTCTCTTACGCTCTCTGTCTGGCTGTACGTCTGGTGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp CCCTTTCATTGCACTTTATCAAAATCACATTGTCAGTTCCAAAGCCAAGTGCAGATATGGCGCCCCATGTaGGTATTGGCCGTTGATGTC +
Preference number: 5 (lower is better)
Translates to: PFHCTLSKSHCQFQSQVQIWRPM*VLAVDV
Trigger: GACATCAACGGCCAATACCAACATGGGGCGCCATAT...CTGCACTTGGCTTTGGAACTGACAATGTGATTTTGATAAAGTGCAATGAAAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414527.6
CDS-3UTR CAA 90 bp ATCTGCAATCTCTTGTATCGGATCAAAAGCTCCATAAACAGTCGTGCCAGCAGTATGATGCTGTACATGTaGGATATGGCGCCCCATGTT +
Preference number: 5 (lower is better)
Translates to: ICNLLYRIKSSINSRASSMMLYM*DMAPHV
Trigger: AACATGGGGCGCCATATCCAACATGTACAGCATCAT...ACTGCTGGCACGACTGTTTATGGAGCTTTTGATCCGATACAAGAGATTGCAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414527.6
CDS-3UTR CAA 90 bp CCCAAAGTCACAAAAGCAGTTTCATGTGGGTTCAGAGAGAATAATGACATTTCTTTCTCTTCCAGGCTGTaGGTCCTTTGCAAGAAGCCG +
Preference number: 5 (lower is better)
Translates to: PKVTKAVSCGFRENNDISFSSRL*VLCKKP
Trigger: CGGCTTCTTGCAAAGGACCAACAGCCTGGAAGAGAA...AGAAATGTCATTATTCTCTCTGAACCCACATGAAACTGCTTTTGTGACTTTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486850.1
CDS-3UTR CAA 90 bp TCTTTAGAGTTGACTTTTATTGACTGCCTTCATCCAGTTTCCAAAATGATGGAGGAGGATTGCCTCTCCTaGAAGGCACTCACAAGGCGA +
Preference number: 5 (lower is better)
Translates to: SLELTFIDCLHPVSKMMEEDCLS*KALTRR
Trigger: TCGCCTTGTGAGTGCCTTCAAGGAGAGGCAATCCTC...CTCCATCATTTTGGAAACTGGATGAAGGCAGTCAATAAAAGTCAACTCTAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486850.1
CDS-3UTR CAA 90 bp TTTGTGTGCTCAGGCTCGCCATTGAAAACCATCTCAAATTCTTCTCTGTTTTTACAGGTTCTTGGAGGATaGCCTCTCCTTGAAGGCACT +
Preference number: 5 (lower is better)
Translates to: FVCSGSPLKTISNSSLFLQVLGG*PLLEGT
Trigger: AGTGCCTTCAAGGAGAGGCAATCCTCCAAGAACCTG...TAAAAACAGAGAAGAATTTGAGATGGTTTTCAATGGCGAGCCTGAGCACACAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp CTTAGGTTTCAGCTAAGCGAGTCACAGAGATTGGTCATCAACTACTACAAAATTGAGGAATTGCACGGTTaGCTCCTCACCGTTCTTAGC +
Preference number: 5 (lower is better)
Translates to: LRFQLSESQRLVINYYKIEELHG*LLTVLS
Trigger: GCTAAGAACGGTGAGGAGCAAACCGTGCAATTCCTC...AATTTTGTAGTAGTTGATGACCAATCTCTGTGACTCGCTTAGCTGAAACCTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp TCATCCATCATCACTTCAGGTGGAGAAACGCTGACAGTGAGGTCGATTCTCACCCTTCTTAAGTGTTATTaGTTCCATGAGGACAAACAC +
Preference number: 5 (lower is better)
Translates to: SSIITSGGETLTVRSILTLLKCY*FHEDKH
Trigger: GTGTTTGTCCTCATGGAACAAATAACACTTAAGAAG...GGTGAGAATCGACCTCACTGTCAGCGTTTCTCCACCTGAAGTGATGATGGATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp GGTCTTCGGAAATGTTGCCTTAGGTTTCAGCTAAGCGAGTCACAGAGATTGGTCTGGCTTCAAGAATTTTaGCCTCAAAATCAGCTGGAA +
Preference number: 5 (lower is better)
Translates to: GLRKCCLRFQLSESQRLVWLQEF*PQNQLE
Trigger: TTCCAGCTGATTTTGAGGCAAAAATTCTTGAAGCCA...GACCAATCTCTGTGACTCGCTTAGCTGAAACCTAAGGCAACATTTCCGAAGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp ACAATCATTGAAATCATGACACATAGTCTCCCCCTCCCACCACCAAGGTCAGACTGGCTTCAAGAATTTTaGCCTCAAAATCAGCTGGAA +
Preference number: 5 (lower is better)
Translates to: TIIEIMTHSLPLPPPRSDWLQEF*PQNQLE
Trigger: TTCCAGCTGATTTTGAGGCAAAAATTCTTGAAGCCA...GTCTGACCTTGGTGGTGGGAGGGGGAGACTATGTGTCATGATTTCAATGATTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp AAAGCATTGAGAACACCAGACGTACAGCCAGACAGAGAGCGTAAGAGAAGAGCATATATCTGCAATCTCTaGTATCGGATCAAAAGCTCC +
Preference number: 5 (lower is better)
Translates to: KALRTPDVQPDRERKRRAYICNL*YRIKSS
Trigger: GGAGCTTTTGATCCGATACAAGAGATTGCAGATATA...TGCTCTTCTCTTACGCTCTCTGTCTGGCTGTACGTCTGGTGTTCTCAATGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp GGCATTCCCATAAACTCATGTTCTGCGAAGGATGATTACAGATCCTGGCCCAGTTATATCTGCAATCTCTaGTATCGGATCAAAAGCTCC +
Preference number: 5 (lower is better)
Translates to: GIPINSCSAKDDYRSWPSYICNL*YRIKSS
Trigger: GGAGCTTTTGATCCGATACAAGAGATTGCAGATATA...ACTGGGCCAGGATCTGTAATCATCCTTCGCAGAACATGAGTTTATGGGAATGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp GCTTTGTGGAATATACCAAAAACAGACGTTTGTGTGCTCAGGCTCGCCATTGAACACACCCCTGAGGCTTaGTGGAATATACCAAAAACA +
Preference number: 5 (lower is better)
Translates to: ALWNIPKTDVCVLRLAIEHTPEA*WNIPKT
Trigger: TGTTTTTGGTATATTCCACAAAGCCTCAGGGGTGTG...TTCAATGGCGAGCCTGAGCACACAAACGTCTGTTTTTGGTATATTCCACAAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp CGGAAATGTTGCCTTAGGTTTCAGCTAAGCGAGTCACAGAGATTGGTCATCAACAGCGAGTCACAGAGATaGGTCATCAACTACTACAAA +
Preference number: 5 (lower is better)
Translates to: RKCCLRFQLSESQRLVINSESQR*VINYYK
Trigger: TTTGTAGTAGTTGATGACCAATCTCTGTGACTCGCT...GTTGATGACCAATCTCTGTGACTCGCTTAGCTGAAACCTAAGGCAACATTTCCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp CTTAGGTTTCAGCTAAGCGAGTCACAGAGATTGGTCATCAACTACTACAAAATTGGTGTCTGGTTCCCGTaGTTGTGTCTGGCTAATTCC +
Preference number: 5 (lower is better)
Translates to: LRFQLSESQRLVINYYKIGVWFP*LCLANS
Trigger: GGAATTAGCCAGACACAACAACGGGAACCAGACACC...AATTTTGTAGTAGTTGATGACCAATCTCTGTGACTCGCTTAGCTGAAACCTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493875.5
CDS TCA 90 bp AAATCACTCTTGGAAAAACTGCCATCCCTTTTGTCTCTGACTCTCTaGTTAGAAGATGATCTTTCCGTCTCAGATGCCATCCCTCTAAGG +
Preference number: 5 (lower is better)
Translates to: KSLLEKLPSLLSLTL*LEDDLSVSDAIPLR
Trigger: CCTTAGAGGGATGGCATCTGAGACGGAAAGATCATCTTCTAATCAGAGAGTCAGAGACAAAAGGGATGGCAGTTTTTCCAAGAGTGATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478562.1
CDS CCA 90 bp GTATCCTGCACACATCTGGTTGCATCCTTGGAGTATACCCTATCATaGAAATTAAGATGGGTGCATCTGCATTTACACATCAGAGATGTG +
Preference number: 5 (lower is better)
Translates to: VSCTHLVASLEYTLS*KLRWVHLHLHIRDV
Trigger: CACATCTCTGATGTGTAAATGCAGATGCACCCATCTTAATTTCCATGATAGGGTATACTCCAAGGATGCAACCAGATGTGTGCAGGATAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478562.1
CDS-3UTR CAA 90 bp TCTTTAGAGTTGACTTTTATTGACTGCCTTCATCCAGTTTCCAAAATGATGGAGAAGAAGCCGCAGATCTaGAGCCCCAGTTTTCTGGTG +
Preference number: 5 (lower is better)
Translates to: SLELTFIDCLHPVSKMMEKKPQI*SPSFLV
Trigger: CACCAGAAAACTGGGGCTCAAGATCTGCGGCTTCTT...CTCCATCATTTTGGAAACTGGATGAAGGCAGTCAATAAAAGTCAACTCTAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000486850.1
CDS-3UTR CAA 90 bp CCAAAGTCACAAAAGCAGTTTCATGTGGGTTCAGAGAGAATAATGACATTTCTTCAGGAAAGCAGGTTCTaGGAGGATTGCCTCTCCTTG +
Preference number: 5 (lower is better)
Translates to: PKSQKQFHVGSERIMTFLQESRF*EDCLSL
Trigger: CAAGGAGAGGCAATCCTCCAAGAACCTGCTTTCCTG...AAGAAATGTCATTATTCTCTCTGAACCCACATGAAACTGCTTTTGTGACTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486850.1
CDS-3UTR CAA 90 bp GGTCTTCGGAAATGTTGCCTTAGGTTTCAGCTAAGCGAGTCACAGAGATTGGTCCTTCTTAAGTGTTATTaGTTCCATGAGGACAAACAC +
Preference number: 5 (lower is better)
Translates to: GLRKCCLRFQLSESQRLVLLKCY*FHEDKH
Trigger: GTGTTTGTCCTCATGGAACAAATAACACTTAAGAAG...GACCAATCTCTGTGACTCGCTTAGCTGAAACCTAAGGCAACATTTCCGAAGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp CTCTTGTATCGGATCAAAAGCTCCATAAACAGTCGTGCCAGCAGTTGCATTGACTATATCTGCAATCTCTaGTATCGGATCAAAAGCTCC +
Preference number: 5 (lower is better)
Translates to: LLYRIKSSINSRASSCIDYICNL*YRIKSS
Trigger: GGAGCTTTTGATCCGATACAAGAGATTGCAGATATA...GTCAATGCAACTGCTGGCACGACTGTTTATGGAGCTTTTGATCCGATACAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414527.6
CDS-3UTR CAA 90 bp CGGAAATGTTGCCTTAGGTTTCAGCTAAGCGAGTCACAGAGATTGGTCATCAACTATATCTGCAATCTCTaGTATCGGATCAAAAGCTCC +
Preference number: 5 (lower is better)
Translates to: RKCCLRFQLSESQRLVINYICNL*YRIKSS
Trigger: GGAGCTTTTGATCCGATACAAGAGATTGCAGATATA...GTTGATGACCAATCTCTGTGACTCGCTTAGCTGAAACCTAAGGCAACATTTCCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp GCTTTGTGGAATATACCAAAAACAGACGTTTGTGTGCTCAGGCTCGCCATTGAAAGTTCCAGGCATTTGTaGATCTGGTTTTCAAATCCC +
Preference number: 5 (lower is better)
Translates to: ALWNIPKTDVCVLRLAIESSRHL*IWFSNP
Trigger: GGGATTTGAAAACCAGATCAACAAATGCCTGGAACT...TTCAATGGCGAGCCTGAGCACACAAACGTCTGTTTTTGGTATATTCCACAAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS TCA 90 bp AGACTTCGAGAAGGTGCAGGAGTTGGAAAGACGCAACTGTTCTCTTaGGGAAAACACCCATTCCAACTCAAGTTAGTAAATATTATCCAT +
Preference number: 5 (lower is better)
Translates to: RLREGAGVGKTQLFS*GKHPFQLKLVNIIH
Trigger: ATGGATAATATTTACTAACTTGAGTTGGAATGGGTGTTTTCCTCAAGAGAACAGTTGCGTCTTTCCAACTCCTGCACCTTCTCGAAGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478562.1
CDS-3UTR CAA 90 bp CTTAGGTTTCAGCTAAGCGAGTCACAGAGATTGGTCATCAACTACTACAAAATTTGCTCAGGCTCGCCATaGAAAACCATCTCAAATTCT +
Preference number: 5 (lower is better)
Translates to: LRFQLSESQRLVINYYKICSGSP*KTISNS
Trigger: AGAATTTGAGATGGTTTTCAATGGCGAGCCTGAGCA...AATTTTGTAGTAGTTGATGACCAATCTCTGTGACTCGCTTAGCTGAAACCTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp TTTGTGTGCTCAGGCTCGCCATTGAAAACCATCTCAAATTCTTCTCTGTTTTTACATCACCATCTTTACTaGACCATCCAACTATCTCTC +
Preference number: 5 (lower is better)
Translates to: FVCSGSPLKTISNSSLFLHHHLY*TIQLSL
Trigger: GAGAGATAGTTGGATGGTCAAGTAAAGATGGTGATG...TAAAAACAGAGAAGAATTTGAGATGGTTTTCAATGGCGAGCCTGAGCACACAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp TTTGTGTGCTCAGGCTCGCCATTGAAAACCATCTCAAATTCTTCTCTGTTTTTAAGTTCCAGGCATTTGTaGATCTGGTTTTCAAATCCC +
Preference number: 5 (lower is better)
Translates to: FVCSGSPLKTISNSSLFLSSRHL*IWFSNP
Trigger: GGGATTTGAAAACCAGATCAACAAATGCCTGGAACT...TAAAAACAGAGAAGAATTTGAGATGGTTTTCAATGGCGAGCCTGAGCACACAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000414527.6
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp TTTGTGTGCTCAGGCTCGCCATTGAAAACCATCTCAAATTCTTCTCTGTTTTTAAGCGAGTCACAGAGATaGGTCATCAACTACTACAAA +
Preference number: 5 (lower is better)
Translates to: FVCSGSPLKTISNSSLFLSESQR*VINYYK
Trigger: TTTGTAGTAGTTGATGACCAATCTCTGTGACTCGCT...TAAAAACAGAGAAGAATTTGAGATGGTTTTCAATGGCGAGCCTGAGCACACAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000493875.5
ENST00000625689.2
CDS GCA 90 bp AAATCCATCGACATGCAACCAAAGGTTATATTTCTCACATATATCTaGAATCTCTTGTATCGGATCAAAAGCTCCATAAACAGTCGTGCC +
Preference number: 5 (lower is better)
Translates to: KSIDMQPKVIFLTYI*NLLYRIKSSINSRA
Trigger: GGCACGACTGTTTATGGAGCTTTTGATCCGATACAAGAGATTGCAGATATATGTGAGAAATATAACCTTTGGTTGCATGTCGATGGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp CTTAGGTTTCAGCTAAGCGAGTCACAGAGATTGGTCATCAACTACTACAAAATTTCATATGTAAACATGTaGGTATTGGCCGTTGATGTC +
Preference number: 5 (lower is better)
Translates to: LRFQLSESQRLVINYYKISYVNM*VLAVDV
Trigger: GACATCAACGGCCAATACCAACATGTTTACATATGA...AATTTTGTAGTAGTTGATGACCAATCTCTGTGACTCGCTTAGCTGAAACCTAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358196.8
ENST00000493875.5
ENST00000625689.2
CDS-3UTR CAA 90 bp TTTGTGTGCTCAGGCTCGCCATTGAAAACCATCTCAAATTCTTCTCTGTTTTTACTTCTTAAGTGTTATTaGTTCCATGAGGACAAACAC +
Preference number: 5 (lower is better)
Translates to: FVCSGSPLKTISNSSLFLLLKCY*FHEDKH
Trigger: GTGTTTGTCCTCATGGAACAAATAACACTTAAGAAG...TAAAAACAGAGAAGAATTTGAGATGGTTTTCAATGGCGAGCCTGAGCACACAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000493875.5
ENST00000625689.2
CDS GCA 72 bp CGGGGGCAGCTAGTCGGCGGAGCGGCGGGGCTCCTCTaGAGGTGCCTGACCGCCTCTGGAGCTGGCCACAGC +
Preference number: 6 (lower is better)
Translates to: RGQLVGGAAGLL*RCLTASGAGHS
Trigger: GCTGTGGCCAGCTCCAGAGGCGGTCAGGCACCTGCAGAGGAGCCCCGCCGCTCCGCCGACTAGCTGCCCCCG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445006.5
CDS CCA 72 bp GGCCGCTCTCGAGTCTGGCGGTGCATCGGCGCGACCTaGAGTGAAGCGCCGAGACGAGGCGGGGTCGGGGTC +
Preference number: 6 (lower is better)
Translates to: GRSRVWRCIGAT*SEAPRRGGVGV
Trigger: GACCCCGACCCCGCCTCGTCTCGGCGCTTCACTCCAGGTCGCGCCGATGCACCGCCAGACTCGAGAGCGGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493875.5
CDS CCA 72 bp GGCGCAGGGAGCGTAGCCCTGGGCCGCTCTCGAGTCTaGCGGTGCATCGGCGCGACCTGGAGTGAAGCGCCG +
Preference number: 6 (lower is better)
Translates to: GAGSVALGRSRV*RCIGATWSEAP
Trigger: CGGCGCTTCACTCCAGGTCGCGCCGATGCACCGCCAGACTCGAGAGCGGCCCAGGGCTACGCTCCCTGCGCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493875.5
CDS GCA 72 bp TCTGCGACAGCGAGCCGGGCACTCCCGCCTTTCCTCTaGACAGCGCCCAGCGATCCGCTCGGCTCGGCCCTG +
Preference number: 6 (lower is better)
Translates to: SATASRALPPFL*TAPSDPLGSAL
Trigger: CAGGGCCGAGCCGAGCGGATCGCTGGGCGCTGTGCAGAGGAAAGGCGGGAGTGCCCGGCTCGCTGTCGCAGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344257.9
ENST00000358196.8
ENST00000375272.5
ENST00000445006.5
ENST00000625689.2
CDS GCA 72 bp GGGAGCGTAGCCCTGGGCCGCTCTCGAGTCTGGCGGTaGATCGGCGCGACCTGGAGTGAAGCGCCGAGACGA +
Preference number: 6 (lower is better)
Translates to: GSVALGRSRVWR*IGATWSEAPRR
Trigger: TCGTCTCGGCGCTTCACTCCAGGTCGCGCCGATGCACCGCCAGACTCGAGAGCGGCCCAGGGCTACGCTCCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493875.5
CDS CCA 72 bp ACCCCCGCCCGGCAGCTCCGGAGGTGGGGTCGGAGTTaGGTGAAGGCTGACCCACACGCAAAGGGCCAGGCT +
Preference number: 6 (lower is better)
Translates to: TPARQLRRWGRS*VKADPHAKGQA
Trigger: AGCCTGGCCCTTTGCGTGTGGGTCAGCCTTCACCCAACTCCGACCCCACCTCCGGAGCTGCCGGGCGGGGGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485013.1
CDS GCA 72 bp GGCGCAGAAACAGGCGTTCCTAGTAGCGCCTTCGGCTaGTGCTGCCCAGGCGCCCTTTGGAGGGACAGGCGC +
Preference number: 6 (lower is better)
Translates to: GAETGVPSSAFG*CCPGALWRDRR
Trigger: GCGCCTGTCCCTCCAAAGGGCGCCTGGGCAGCAGCAGCCGAAGGCGCTACTAGGAACGCCTGTTTCTGCGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455008.5
CDS CCA 72 bp GTCCGCTCCCGCGTTCGAGGAGGTTGCGGACGAAGATaGGGTCGAAGACGCCATCAGCTCGGTCGTCCCGGG +
Preference number: 6 (lower is better)
Translates to: VRSRVRGGCGRR*GRRRHQLGRPG
Trigger: CCCGGGACGACCGAGCTGATGGCGTCTTCGACCCCATCTTCGTCCGCAACCTCCTCGAACGCGGGAGCGGAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000344257.9
ENST00000358196.8
ENST00000375272.5
ENST00000414527.6
ENST00000445006.5
ENST00000454603.5
ENST00000455008.5
ENST00000456864.5
ENST00000493875.5
ENST00000625689.2
CDS CCA 72 bp GTCGTCCCGGGGCCTCTACTGTCCAGAGTCCTCGACTaGTCCGGCGCAGAAACAGGCCACCTCGGCTCTGCG +
Preference number: 6 (lower is better)
Translates to: VVPGPLLSRVLD*SGAETGHLGSA
Trigger: CGCAGAGCCGAGGTGGCCTGTTTCTGCGCCGGACCAGTCGAGGACTCTGGACAGTAGAGGCCCCGGGACGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375272.5
CDS CAA 72 bp GTGAGCGATTTTCCAGCCGAGCCGCTACAAGCCCCATaGGGCACTCAGCAGCCGGCGTGTGGGCCAGCGGGG +
Preference number: 6 (lower is better)
Translates to: VSDFPAEPLQAP*GTQQPACGPAG
Trigger: CCCCGCTGGCCCACACGCCGGCTGCTGAGTGCCCAATGGGGCTTGTAGCGGCTCGGCTGGAAAATCGCTCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493875.5
CDS GCA 72 bp AGCGATCCGCTCGGCTCGGCCCTGACAGGCGTAATCTaGCCGGCGTCACCTCCAGCTGCTTCCTCGTTCTCG +
Preference number: 6 (lower is better)
Translates to: SDPLGSALTGVI*PASPPAASSFS
Trigger: CGAGAACGAGGAAGCAGCTGGAGGTGACGCCGGGCAGATTACGCCTGTCAGGGCCGAGCCGAGCGGATCGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344257.9
ENST00000358196.8
ENST00000375272.5
ENST00000445006.5
ENST00000625689.2
CDS GCA 72 bp GAAACAGGCGTTCCTAGTAGCGCCTTCGGCTGCTGCTaGCCAGGCGCCCTTTGGAGGGACAGGCGCTCGCAG +
Preference number: 6 (lower is better)
Translates to: ETGVPSSAFGCC*PGALWRDRRSQ
Trigger: CTGCGAGCGCCTGTCCCTCCAAAGGGCGCCTGGGCAGCAGCAGCCGAAGGCGCTACTAGGAACGCCTGTTTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455008.5
CDS GCA 72 bp GCAGAAACAGGCGTTCCTAGTAGCGCCTTCGGCTGCTaGTGCCCAGGCGCCCTTTGGAGGGACAGGCGCTCG +
Preference number: 6 (lower is better)
Translates to: AETGVPSSAFGC*CPGALWRDRRS
Trigger: CGAGCGCCTGTCCCTCCAAAGGGCGCCTGGGCAGCAGCAGCCGAAGGCGCTACTAGGAACGCCTGTTTCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455008.5
CDS CCA 72 bp GTCGTCCCGGGGCCTCTACTGTCCAGAGTCCTCGACTaGTCCGGCGCAGAAACAGGCTCGGCTCTGCGACAG +
Preference number: 6 (lower is better)
Translates to: VVPGPLLSRVLD*SGAETGSALRQ
Trigger: CTGTCGCAGAGCCGAGCCTGTTTCTGCGCCGGACCAGTCGAGGACTCTGGACAGTAGAGGCCCCGGGACGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344257.9
ENST00000358196.8
ENST00000445006.5
ENST00000625689.2
CDS CCA 72 bp AGTAGCGCCTTCGGCTGCTGCTGCCCAGGCGCCCTTTaGAGGGACAGGCGCTCGCAGCATGGAAGCTCAAGG +
Preference number: 6 (lower is better)
Translates to: SSAFGCCCPGAL*RDRRSQHGSSR
Trigger: CCTTGAGCTTCCATGCTGCGAGCGCCTGTCCCTCCAAAGGGCGCCTGGGCAGCAGCAGCCGAAGGCGCTACT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455008.5
CDS CCA 72 bp CCGGGGGCACGGAGGCTCCCCTTGAAGATCCGGCTCTaGAGAGACAAGAGGGAGGAAAGGCAGCGAGCCTGC +
Preference number: 6 (lower is better)
Translates to: PGARRLPLKIRL*RDKREERQRAC
Trigger: GCAGGCTCGCTGCCTTTCCTCCCTCTTGTCTCTCCAGAGCCGGATCTTCAAGGGGAGCCTCCGTGCCCCCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493875.5
CDS CCA 72 bp GTCGTCCCGGGGCCTCTACTGTCCAGAGTCCTCGACTaGTCCGGCGCAGAAACAGGCGTTCCTAGTAGCGCC +
Preference number: 6 (lower is better)
Translates to: VVPGPLLSRVLD*SGAETGVPSSA
Trigger: GGCGCTACTAGGAACGCCTGTTTCTGCGCCGGACCAGTCGAGGACTCTGGACAGTAGAGGCCCCGGGACGAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455008.5
CDS GCA 72 bp CCTGACAGGCGTAATCTGCCCGGCGTCACCTCCAGCTaGTTCCTCGTTCTCGCTAGTTCCCTCTCGCACGCG +
Preference number: 6 (lower is better)
Translates to: PDRRNLPGVTSS*FLVLASSLSHA
Trigger: CGCGTGCGAGAGGGAACTAGCGAGAACGAGGAAGCAGCTGGAGGTGACGCCGGGCAGATTACGCCTGTCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358196.8
ENST00000375272.5
ENST00000445006.5
ENST00000625689.2
CDS CCA 72 bp GTCGTCCCGGGGCCTCTACTGTCCAGAGTCCTCGACTaGTCCGGCGCAGAAACAGGCTTGCACTCCAGACAG +
Preference number: 6 (lower is better)
Translates to: VVPGPLLSRVLD*SGAETGLHSRQ
Trigger: CTGTCTGGAGTGCAAGCCTGTTTCTGCGCCGGACCAGTCGAGGACTCTGGACAGTAGAGGCCCCGGGACGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456864.5
CDS CAA 90 bp ACGCCGCACCAGGTATCGTACGTTGTGGGGCGCAGGTTAGTGGTATaGGGGTCCGCTCCCGCGTTCGAGGAGGTTGCGGACGAAGATGGG +
Preference number: 6 (lower is better)
Translates to: TPHQVSYVVGRRLVV*GSAPAFEEVADEDG
Trigger: CCCATCTTCGTCCGCAACCTCCTCGAACGCGGGAGCGGACCCCAATACCACTAACCTGCGCCCCACAACGTACGATACCTGGTGCGGCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000344257.9
ENST00000358196.8
ENST00000375272.5
ENST00000414527.6
ENST00000445006.5
ENST00000454603.5
ENST00000455008.5
ENST00000456864.5
ENST00000493875.5
ENST00000625689.2
CDS GCA 72 bp AGTGGTATTGGGGTCCGCTCCCGCGTTCGAGGAGGTTaGGGACGAAGATGGGGTCGAAGACGCCATCAGCTC +
Preference number: 6 (lower is better)
Translates to: SGIGVRSRVRGG*GRRWGRRRHQL
Trigger: GAGCTGATGGCGTCTTCGACCCCATCTTCGTCCGCAACCTCCTCGAACGCGGGAGCGGACCCCAATACCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000344257.9
ENST00000358196.8
ENST00000375272.5
ENST00000414527.6
ENST00000445006.5
ENST00000454603.5
ENST00000455008.5
ENST00000456864.5
ENST00000493875.5
ENST00000625689.2
CDS CCA 72 bp CCCAGGCGCCCTTTGGAGGGACAGGCGCTCGCAGCATaGAAGCTCAAGGGAAAATCGCTCTTGCCCCACTTC +
Preference number: 6 (lower is better)
Translates to: PRRPLEGQALAA*KLKGKSLLPHF
Trigger: GAAGTGGGGCAAGAGCGATTTTCCCTTGAGCTTCCATGCTGCGAGCGCCTGTCCCTCCAAAGGGCGCCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455008.5
CDS CCA 72 bp GTCGTCCCGGGGCCTCTACTGTCCAGAGTCCTCGACTaGTCCGGCGCAGAAACAGGCTGCAAAGAGAAGCGA +
Preference number: 6 (lower is better)
Translates to: VVPGPLLSRVLD*SGAETGCKEKR
Trigger: TCGCTTCTCTTTGCAGCCTGTTTCTGCGCCGGACCAGTCGAGGACTCTGGACAGTAGAGGCCCCGGGACGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493875.5
CDS CAA 72 bp CAGGTATCGTACGTTGTGGGGCGCAGGTTAGTGGTATaGGGGTCCGCTCCCGCGTTCGAGGAGGTTGCGGAC +
Preference number: 6 (lower is better)
Translates to: QVSYVVGRRLVV*GSAPAFEEVAD
Trigger: GTCCGCAACCTCCTCGAACGCGGGAGCGGACCCCAATACCACTAACCTGCGCCCCACAACGTACGATACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000344257.9
ENST00000358196.8
ENST00000375272.5
ENST00000414527.6
ENST00000429023.1
ENST00000445006.5
ENST00000454603.5
ENST00000455008.5
ENST00000456864.5
ENST00000493875.5
ENST00000625689.2
CDS TCA 72 bp GCTCCAGGGACTCGGGGTGGTCAGAGAGCTCCAAGTTaGAGCCCTCCATGCCTTCCAGCAACTGGTGTGGGT +
Preference number: 6 (lower is better)
Translates to: APGTRGGQRAPS*SPPCLPATGVG
Trigger: ACCCACACCAGTTGCTGGAAGGCATGGAGGGCTTCAACTTGGAGCTCTCTGACCACCCCGAGTCCCTGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344257.9
ENST00000358196.8
ENST00000375272.5
ENST00000414527.6
ENST00000429023.1
ENST00000493875.5
ENST00000625689.2
CDS GCA 72 bp TCCAGAGTCCTCGACTGGTCCGGCGCAGAAACAGGCTaGAAAGAGAAGCGAGAGCTGTGCGGGGAGGACTTC +
Preference number: 6 (lower is better)
Translates to: SRVLDWSGAETG*KEKRELCGEDF
Trigger: GAAGTCCTCCCCGCACAGCTCTCGCTTCTCTTTGCAGCCTGTTTCTGCGCCGGACCAGTCGAGGACTCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493875.5
CDS CCA 72 bp CCGCAGATCTTGAGCCCCAGTTTTCTGGTGCATCCATaGGCCACGCCGCACCAGGTATCGTACGTTGTGGGG +
Preference number: 6 (lower is better)
Translates to: PQILSPSFLVHP*ATPHQVSYVVG
Trigger: CCCCACAACGTACGATACCTGGTGCGGCGTGGCCCATGGATGCACCAGAAAACTGGGGCTCAAGATCTGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000344257.9
ENST00000358196.8
ENST00000375272.5
ENST00000414527.6
ENST00000429023.1
ENST00000454603.5
ENST00000455008.5
ENST00000456864.5
ENST00000493875.5
ENST00000625689.2
CDS CCA 72 bp GAGGGCGCACGGGGCGGGCATGTCTGGTTCGGTGTCTaGTTCCCGTTGTTGTGTCTGGCTAATTCCCTGGAA +
Preference number: 6 (lower is better)
Translates to: EGARGGHVWFGV*FPLLCLANSLE
Trigger: TTCCAGGGAATTAGCCAGACACAACAACGGGAACCAGACACCGAACCAGACATGCCCGCCCCGTGCGCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493875.5
CDS CCA 72 bp CCGCAGATCTTGAGCCCCAGTTTTCTGGTGCATCCATaGGCCACGCCGCACCAGGTATCGTACGCTAGGACG +
Preference number: 6 (lower is better)
Translates to: PQILSPSFLVHP*ATPHQVSYART
Trigger: CGTCCTAGCGTACGATACCTGGTGCGGCGTGGCCCATGGATGCACCAGAAAACTGGGGCTCAAGATCTGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485013.1
CDS CAA 72 bp TGCTCCAGGGACTCGGGGTGGTCAGAGAGCTCCAAGTaGAAGCCCTCCATGCCTTCCAGCAACTGGTGTGGG +
Preference number: 6 (lower is better)
Translates to: CSRDSGWSESSK*KPSMPSSNWCG
Trigger: CCCACACCAGTTGCTGGAAGGCATGGAGGGCTTCAACTTGGAGCTCTCTGACCACCCCGAGTCCCTGGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344257.9
ENST00000358196.8
ENST00000375272.5
ENST00000414527.6
ENST00000429023.1
ENST00000493875.5
ENST00000625689.2
CDS CAA 90 bp GGCGCACGGGGCGGGCATGTCTGGTTCGGTGTCTGGTTCCCGTTGTaGTGTCTGGCTAATTCCCTGGAAAGAAAGAGGCTAACTGCTCCG +
Preference number: 6 (lower is better)
Translates to: GARGGHVWFGVWFPL*CLANSLERKRLTAP
Trigger: CGGAGCAGTTAGCCTCTTTCTTTCCAGGGAATTAGCCAGACACAACAACGGGAACCAGACACCGAACCAGACATGCCCGCCCCGTGCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493875.5
CDS CAA 90 bp GAGGGCGCACGGGGCGGGCATGTCTGGTTCGGTGTCTGGTTCCCGTaGTTGTGTCTGGCTAATTCCCTGGAAAGAAAGAGGCTAACTGCT +
Preference number: 6 (lower is better)
Translates to: EGARGGHVWFGVWFP*LCLANSLERKRLTA
Trigger: AGCAGTTAGCCTCTTTCTTTCCAGGGAATTAGCCAGACACAACAACGGGAACCAGACACCGAACCAGACATGCCCGCCCCGTGCGCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493875.5
CDS CAA 90 bp CGGAAGCGGGCATCCCGGTCGCTGTTTTCACAGGAAAGCAGGTTCTaGGAGGATTGCCTCTCCTTGAAGGCACTCACAAGGCGACTCTTC +
Preference number: 6 (lower is better)
Translates to: RKRASRSLFSQESRF*EDCLSLKALTRRLF
Trigger: GAAGAGTCGCCTTGTGAGTGCCTTCAAGGAGAGGCAATCCTCCAAGAACCTGCTTTCCTGTGAAAACAGCGACCGGGATGCCCGCTTCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000344257.9
ENST00000358196.8
ENST00000375272.5
ENST00000414527.6
ENST00000429023.1
ENST00000455008.5
ENST00000456864.5
ENST00000485013.1
ENST00000486850.1
ENST00000493270.1
ENST00000493875.5
ENST00000625689.2
CDS GCA 72 bp CCATACTTCAAGGTGTCTCTGCAGTCAACCAGGATCTaGTCCAGGGACTCGGGGTGGTCAGAGAGCTCCAAG +
Preference number: 6 (lower is better)
Translates to: PYFKVSLQSTRI*SRDSGWSESSK
Trigger: CTTGGAGCTCTCTGACCACCCCGAGTCCCTGGAGCAGATCCTGGTTGACTGCAGAGACACCTTGAAGTATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344257.9
ENST00000358196.8
ENST00000375272.5
ENST00000414527.6
ENST00000429023.1
ENST00000493875.5
ENST00000625689.2
CDS GCA 72 bp GATGACCTGTGCGAACCCCATACTTCAAGGTGTCTCTaGAGTCAACCAGGATCTGCTCCAGGGACTCGGGGT +
Preference number: 6 (lower is better)
Translates to: DDLCEPHTSRCL*SQPGSAPGTRG
Trigger: ACCCCGAGTCCCTGGAGCAGATCCTGGTTGACTGCAGAGACACCTTGAAGTATGGGGTTCGCACAGGTCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344257.9
ENST00000358196.8
ENST00000375272.5
ENST00000414527.6
ENST00000429023.1
ENST00000493875.5
ENST00000625689.2
CDS GCA 72 bp CGCTCGCAGCATGGAAGCTCAAGGGAAAATCGCTCTTaGCCCACTTCAACTAGAGCCTCAGCCTCCGTGCTT +
Preference number: 6 (lower is better)
Translates to: RSQHGSSRENRS*PTSTRASASVL
Trigger: AAGCACGGAGGCTGAGGCTCTAGTTGAAGTGGGGCAAGAGCGATTTTCCCTTGAGCTTCCATGCTGCGAGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455008.5
CDS GCA 72 bp AGAGTGCTGCAAACTGCCCAGCCCCTGAGGGTCAGCTaGAGAGTGAATCAACTCTCCAAGCAGGGCTCTTGT +
Preference number: 6 (lower is better)
Translates to: RVLQTAQPLRVS*RVNQLSKQGSC
Trigger: ACAAGAGCCCTGCTTGGAGAGTTGATTCACTCTGCAGCTGACCCTCAGGGGCTGGGCAGTTTGCAGCACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493270.1
CDS CAA 72 bp CGGGGCGGGCATGTCTGGTTCGGTGTCTGGTTCCCGTaGTTGTGTCTGGCTAATTCCCTGGAAAGAAAGAGG +
Preference number: 6 (lower is better)
Translates to: RGGHVWFGVWFP*LCLANSLERKR
Trigger: CCTCTTTCTTTCCAGGGAATTAGCCAGACACAACAACGGGAACCAGACACCGAACCAGACATGCCCGCCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493875.5
CDS TCA 72 bp AGCAGCAGTAGTCTCTCAGTGGGGCTGCCAATCTCGTaGGTCAGCCAACAAGTACTGCAAAGAGACCCCACG +
Preference number: 6 (lower is better)
Translates to: SSSSLSVGLPIS*VSQQVLQRDPT
Trigger: CGTGGGGTCTCTTTGCAGTACTTGTTGGCTGACTCACGAGATTGGCAGCCCCACTGAGAGACTACTGCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478562.1
CDS GCA 72 bp CACTCCAGACAGCCAGAAAGCAGCGAGTCGGAATGTTaGTTGCCTCCCTCTTATCCCAGCCGGTTTTTAGCC +
Preference number: 6 (lower is better)
Translates to: HSRQPESSESEC*LPPSYPSRFLA
Trigger: GGCTAAAAACCGGCTGGGATAAGAGGGAGGCAAGCAACATTCCGACTCGCTGCTTTCTGGCTGTCTGGAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000456864.5
ENST00000493875.5
CDS CCA 72 bp CAAGTTGAAGCCCTCCATGCCTTCCAGCAACTGGTGTaGGTGATGAAAGTCCAGCACCTTGGTGGAGCGATC +
Preference number: 6 (lower is better)
Translates to: QVEALHAFQQLV*VMKVQHLGGAI
Trigger: GATCGCTCCACCAAGGTGCTGGACTTTCATCACCCACACCAGTTGCTGGAAGGCATGGAGGGCTTCAACTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344257.9
ENST00000358196.8
ENST00000375272.5
ENST00000414527.6
ENST00000429023.1
ENST00000493875.5
ENST00000625689.2
CDS CCA 72 bp CAAGGGCAGGAAAGGACAGCAGCAGTAGTCTCTCAGTaGGGCTGCCAATCTCGTGAGTCAGCCAACAAGTAC +
Preference number: 6 (lower is better)
Translates to: QGQERTAAVVSQ*GCQSRESANKY
Trigger: GTACTTGTTGGCTGACTCACGAGATTGGCAGCCCCACTGAGAGACTACTGCTGCTGTCCTTTCCTGCCCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478562.1
CDS CAA 72 bp CCCAGTGTAGCTTTGGAGGGAGTACAGACCTTTTCCTaGACGAGAATGGCAGAGCACTGCAACAGCACGCCC +
Preference number: 6 (lower is better)
Translates to: PSVALEGVQTFS*TRMAEHCNSTP
Trigger: GGGCGTGCTGTTGCAGTGCTCTGCCATTCTCGTCAAGGAAAAGGTCTGTACTCCCTCCAAAGCTACACTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478562.1
CDS CAA 90 bp GGCATCCCGGTCGCTGTTTTCACAGGAAAGCAGGTTCTTGGAGGATaGCCTCTCCTTGAAGGCACTCACAAGGCGACTCTTCTCTTCCAG +
Preference number: 6 (lower is better)
Translates to: GIPVAVFTGKQVLGG*PLLEGTHKATLLFQ
Trigger: CTGGAAGAGAAGAGTCGCCTTGTGAGTGCCTTCAAGGAGAGGCAATCCTCCAAGAACCTGCTTTCCTGTGAAAACAGCGACCGGGATGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000344257.9
ENST00000358196.8
ENST00000375272.5
ENST00000414527.6
ENST00000429023.1
ENST00000455008.5
ENST00000456864.5
ENST00000485013.1
ENST00000486850.1
ENST00000493270.1
ENST00000493875.5
ENST00000625689.2
CDS CAA 90 bp GTGAGAGGGGGAAAAAGGCCCATATCTTTACGTTCTCCCTCGGACTaGGCCAGAGAAGAACCACAGTCACCTTGCACTCCAGACAGCCAG +
Preference number: 6 (lower is better)
Translates to: VRGGKRPISLRSPSD*AREEPQSPCTPDSQ
Trigger: CTGGCTGTCTGGAGTGCAAGGTGACTGTGGTTCTTCTCTGGCCAAGTCCGAGGGAGAACGTAAAGATATGGGCCTTTTTCCCCCTCTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000493875.5
CDS TCA 72 bp CACAGGAAAGCAGGTTCTTGGAGGATTGCCTCTCCTTaGAGGCACTCACAAGGCGACTCTTCTCTTCCAGGC +
Preference number: 6 (lower is better)
Translates to: HRKAGSWRIASP*RHSQGDSSLPG
Trigger: GCCTGGAAGAGAAGAGTCGCCTTGTGAGTGCCTTCAAGGAGAGGCAATCCTCCAAGAACCTGCTTTCCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000344257.9
ENST00000358196.8
ENST00000375272.5
ENST00000414527.6
ENST00000429023.1
ENST00000454603.5
ENST00000455008.5
ENST00000456864.5
ENST00000485013.1
ENST00000486850.1
ENST00000493270.1
ENST00000493875.5
ENST00000625689.2
CDS GCA 72 bp CCATCACCTCTGGAGGTCACAATCATGCTTTGGTTCTaGTCTGAGCCCCATCACCGTAGCAACCAACACTCC +
Preference number: 6 (lower is better)
Translates to: PSPLEVTIMLWF*SEPHHRSNQHS
Trigger: GGAGTGTTGGTTGCTACGGTGATGGGGCTCAGAGCAGAACCAAAGCATGATTGTGACCTCCAGAGGTGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344257.9
ENST00000375272.5
CDS CAA 72 bp GGCGGGCATGTCTGGTTCGGTGTCTGGTTCCCGTTGTaGTGTCTGGCTAATTCCCTGGAAAGAAAGAGGCTA +
Preference number: 6 (lower is better)
Translates to: GGHVWFGVWFPL*CLANSLERKRL
Trigger: TAGCCTCTTTCTTTCCAGGGAATTAGCCAGACACAACAACGGGAACCAGACACCGAACCAGACATGCCCGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493875.5
CDS CAA 90 bp GAAGGCACTCACAAGGCGACTCTTCTCTTCCAGGCTGTTGGTCCTTaGCAAGAAGCCTATGGCACAAGAAGCTGGTCAGAGAGAGTGCTG +
Preference number: 6 (lower is better)
Translates to: EGTHKATLLFQAVGP*QEAYGTRSWSERVL
Trigger: CAGCACTCTCTCTGACCAGCTTCTTGTGCCATAGGCTTCTTGCAAAGGACCAACAGCCTGGAAGAGAAGAGTCGCCTTGTGAGTGCCTTC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493270.1
CDS GCA 72 bp GTGTGCAGTTACCATCACCTCTGGAGGTCACAATCATaGTTTGGTTCTGCTCTGAGCCCCATCACCGTAGCA +
Preference number: 6 (lower is better)
Translates to: VCSYHHLWRSQS*FGSALSPITVA
Trigger: TGCTACGGTGATGGGGCTCAGAGCAGAACCAAAGCATGATTGTGACCTCCAGAGGTGATGGTAACTGCACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344257.9
ENST00000375272.5
CDS GCA 72 bp CAGGAAAGGACAGCAGCAGTAGTCTCTCAGTGGGGCTaGCAATCTCGTGAGTCAGCCAACAAGTACTGCAAA +
Preference number: 6 (lower is better)
Translates to: QERTAAVVSQWG*QSRESANKYCK
Trigger: TTTGCAGTACTTGTTGGCTGACTCACGAGATTGGCAGCCCCACTGAGAGACTACTGCTGCTGTCCTTTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478562.1
CDS CCA 72 bp AGGCACTCACAAGGCGACTCTTCTCTTCCAGGCTGTTaGTCCTTTGCAAGAAGCCTATGGCACAAGAAGCTG +
Preference number: 6 (lower is better)
Translates to: RHSQGDSSLPGC*SFARSLWHKKL
Trigger: CAGCTTCTTGTGCCATAGGCTTCTTGCAAAGGACCAACAGCCTGGAAGAGAAGAGTCGCCTTGTGAGTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493270.1
CDS CAA 72 bp TCACAGGAAAGCAGGTTCTTGGAGGATTGCCTCTCCTaGAAGGCACTCACAAGGCGACTCTTCTCTTCCAGG +
Preference number: 6 (lower is better)
Translates to: SQESRFLEDCLS*KALTRRLFSSR
Trigger: CCTGGAAGAGAAGAGTCGCCTTGTGAGTGCCTTCAAGGAGAGGCAATCCTCCAAGAACCTGCTTTCCTGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000344257.9
ENST00000358196.8
ENST00000375272.5
ENST00000414527.6
ENST00000429023.1
ENST00000454603.5
ENST00000455008.5
ENST00000456864.5
ENST00000485013.1
ENST00000486850.1
ENST00000493270.1
ENST00000493875.5
ENST00000625689.2
CDS CAA 72 bp GAGTATGTCCACCACTTCCAGGAGGAATTGCACGGTTaGCTCCTCACCGTTCTTAGCCGGAAGCAGATCTCT +
Preference number: 6 (lower is better)
Translates to: EYVHHFQEELHG*LLTVLSRKQIS
Trigger: AGAGATCTGCTTCCGGCTAAGAACGGTGAGGAGCAAACCGTGCAATTCCTCCTGGAAGTGGTGGACATACTC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000344257.9
ENST00000358196.8
ENST00000375272.5
ENST00000414527.6
ENST00000429023.1
ENST00000493270.1
ENST00000493875.5
ENST00000625689.2
CDS CAA 72 bp CACAAGGCGACTCTTCTCTTCCAGGCTGTTGGTCCTTaGCAAGAAGCCTATGGCACAAGAAGCTGGTCAGAG +
Preference number: 6 (lower is better)
Translates to: HKATLLFQAVGP*QEAYGTRSWSE
Trigger: CTCTGACCAGCTTCTTGTGCCATAGGCTTCTTGCAAAGGACCAACAGCCTGGAAGAGAAGAGTCGCCTTGTG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493270.1
CDS CAA 90 bp TCGCTGTTTTCACAGGAAAGCAGGTTCTTGGAGGATTGCCTCTCCTaGAAGGCACTCACAAGGCGACTCTTCTCTTCCAGGCTGTTGGTC +
Preference number: 6 (lower is better)
Translates to: SLFSQESRFLEDCLS*KALTRRLFSSRLLV
Trigger: GACCAACAGCCTGGAAGAGAAGAGTCGCCTTGTGAGTGCCTTCAAGGAGAGGCAATCCTCCAAGAACCTGCTTTCCTGTGAAAACAGCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000344257.9
ENST00000358196.8
ENST00000375272.5
ENST00000414527.6
ENST00000429023.1
ENST00000454603.5
ENST00000455008.5
ENST00000456864.5
ENST00000485013.1
ENST00000486850.1
ENST00000493270.1
ENST00000493875.5
ENST00000625689.2
CDS CAA 90 bp CTCTCCTTGAAGGCACTCACAAGGCGACTCTTCTCTTCCAGGCTGTaGGTCCTTTGCAAGAAGCCTATGGCACAAGAAGCTGGTCAGAGA +
Preference number: 6 (lower is better)
Translates to: LSLKALTRRLFSSRL*VLCKKPMAQEAGQR
Trigger: TCTCTGACCAGCTTCTTGTGCCATAGGCTTCTTGCAAAGGACCAACAGCCTGGAAGAGAAGAGTCGCCTTGTGAGTGCCTTCAAGGAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493270.1
CDS GCA 72 bp TCGCTGTTTTCACAGGAAAGCAGGTTCTTGGAGGATTaGCTCTCCTTGAAGGCACTCACAAGGCGACTCTTC +
Preference number: 6 (lower is better)
Translates to: SLFSQESRFLED*LSLKALTRRLF
Trigger: GAAGAGTCGCCTTGTGAGTGCCTTCAAGGAGAGGCAATCCTCCAAGAACCTGCTTTCCTGTGAAAACAGCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000344257.9
ENST00000358196.8
ENST00000375272.5
ENST00000414527.6
ENST00000429023.1
ENST00000454603.5
ENST00000455008.5
ENST00000456864.5
ENST00000485013.1
ENST00000486850.1
ENST00000493270.1
ENST00000493875.5
ENST00000625689.2
CDS GCA 72 bp AGTATGTCCACCACTTCCAGGAGGAATTGCACGGTTTaGTCCTCACCGTTCTTAGCCGGAAGCAGATCTCTA +
Preference number: 6 (lower is better)
Translates to: SMSTTSRRNCTV*SSPFLAGSRSL
Trigger: TAGAGATCTGCTTCCGGCTAAGAACGGTGAGGAGCAAACCGTGCAATTCCTCCTGGAAGTGGTGGACATACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000344257.9
ENST00000358196.8
ENST00000375272.5
ENST00000414527.6
ENST00000429023.1
ENST00000493270.1
ENST00000493875.5
ENST00000625689.2
CDS GCA 72 bp TGTAAACCTCTGGAGGTCACAATCATGCTTTGGTTCTaGTCTGAGCCCCATCACCGTAGCAACCAACACTCC +
Preference number: 6 (lower is better)
Translates to: CKPLEVTIMLWF*SEPHHRSNQHS
Trigger: GGAGTGTTGGTTGCTACGGTGATGGGGCTCAGAGCAGAACCAAAGCATGATTGTGACCTCCAGAGGTTTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429023.1
CDS GCA 72 bp ACAAGGCGACTCTTCTCTTCCAGGCTGTTGGTCCTTTaGAAGAAGCCTATGGCACAAGAAGCTGGTCAGAGA +
Preference number: 6 (lower is better)
Translates to: TRRLFSSRLLVL*KKPMAQEAGQR
Trigger: TCTCTGACCAGCTTCTTGTGCCATAGGCTTCTTGCAAAGGACCAACAGCCTGGAAGAGAAGAGTCGCCTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493270.1
CDS CCA 72 bp GAAAAAGGCCCATATCTTTACGTTCTCCCTCGGACTTaGCCAGAGAAGAACCACAGTCACCTTGCACTCCAG +
Preference number: 6 (lower is better)
Translates to: EKGPYLYVLPRT*PEKNHSHLALQ
Trigger: CTGGAGTGCAAGGTGACTGTGGTTCTTCTCTGGCCAAGTCCGAGGGAGAACGTAAAGATATGGGCCTTTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493875.5
CDS CAA 72 bp GTCGCTGTTTTCACAGGAAAGCAGGTTCTTGGAGGATaGCCTCTCCTTGAAGGCACTCACAAGGCGACTCTT +
Preference number: 6 (lower is better)
Translates to: VAVFTGKQVLGG*PLLEGTHKATL
Trigger: AAGAGTCGCCTTGTGAGTGCCTTCAAGGAGAGGCAATCCTCCAAGAACCTGCTTTCCTGTGAAAACAGCGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000344257.9
ENST00000358196.8
ENST00000375272.5
ENST00000414527.6
ENST00000429023.1
ENST00000454603.5
ENST00000455008.5
ENST00000456864.5
ENST00000485013.1
ENST00000486850.1
ENST00000493270.1
ENST00000493875.5
ENST00000625689.2
CDS CAA 72 bp GGAAAAAGGCCCATATCTTTACGTTCTCCCTCGGACTaGGCCAGAGAAGAACCACAGTCACCTTGCACTCCA +
Preference number: 6 (lower is better)
Translates to: GKRPISLRSPSD*AREEPQSPCTP
Trigger: TGGAGTGCAAGGTGACTGTGGTTCTTCTCTGGCCAAGTCCGAGGGAGAACGTAAAGATATGGGCCTTTTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493875.5
CDS CAA 72 bp AAGGCACTCACAAGGCGACTCTTCTCTTCCAGGCTGTaGGTCCTTTGCAAGAAGCCTATGGCACAAGAAGCT +
Preference number: 6 (lower is better)
Translates to: KALTRRLFSSRL*VLCKKPMAQEA
Trigger: AGCTTCTTGTGCCATAGGCTTCTTGCAAAGGACCAACAGCCTGGAAGAGAAGAGTCGCCTTGTGAGTGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493270.1
CDS CAA 90 bp ATAGTTGAGGAGTATGTCCACCACTTCCAGGAGGAATTGCACGGTTaGCTCCTCACCGTTCTTAGCCGGAAGCAGATCTCTAGCAAACAG +
Preference number: 6 (lower is better)
Translates to: IVEEYVHHFQEELHG*LLTVLSRKQISSKQ
Trigger: CTGTTTGCTAGAGATCTGCTTCCGGCTAAGAACGGTGAGGAGCAAACCGTGCAATTCCTCCTGGAAGTGGTGGACATACTCCTCAACTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000344257.9
ENST00000358196.8
ENST00000375272.5
ENST00000414527.6
ENST00000429023.1
ENST00000493270.1
ENST00000493875.5
ENST00000625689.2
CDS TCA 72 bp CCTTGGTGGAGCGATCAAATGTCTTGCGGACATAGTTaGGGAGTATGTCCACCACTTCCAGGAGGAATTGCA +
Preference number: 6 (lower is better)
Translates to: PWWSDQMSCGHS*GVCPPLPGGIA
Trigger: TGCAATTCCTCCTGGAAGTGGTGGACATACTCCTCAACTATGTCCGCAAGACATTTGATCGCTCCACCAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000344257.9
ENST00000358196.8
ENST00000375272.5
ENST00000414527.6
ENST00000429023.1
ENST00000493270.1
ENST00000493875.5
ENST00000625689.2
CDS GCA 72 bp TTGGCCCTGAAAGAAGCACATGAGACTTCGAGAAGGTaGAGGAGTTGGAAAGACGCAACTGTTCTCTTGAGG +
Preference number: 6 (lower is better)
Translates to: LALKEAHETSRR*RSWKDATVLLR
Trigger: CCTCAAGAGAACAGTTGCGTCTTTCCAACTCCTGCACCTTCTCGAAGTCTCATGTGCTTCTTTCAGGGCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478562.1
CDS CCA 72 bp ATTAAGTCGCCGATCATAAAATGTCAGAAACCAGCCTaGGTTACTGAGAGAGGTGGTGGAAGTGCCAGCCCT +
Preference number: 6 (lower is better)
Translates to: IKSPIIKCQKPA*VTERGGGSASP
Trigger: AGGGCTGGCACTTCCACCACCTCTCTCAGTAACCCAGGCTGGTTTCTGACATTTTATGATCGGCGACTTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462739.1
CDS CAA 72 bp GTGCTTTCTAAAGAACGTACGGGCCCCAGTGTAGCTTaGGAGGGAGTACAGACCTTTTCCTTGACGAGAATG +
Preference number: 6 (lower is better)
Translates to: VLSKERTGPSVA*EGVQTFSLTRM
Trigger: CATTCTCGTCAAGGAAAAGGTCTGTACTCCCTCCAAAGCTACACTGGGGCCCGTACGTTCTTTAGAAAGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478562.1
CDS CAA 90 bp AGACGCTGTGCAGATTCTGGCTCCTACAGGCTGGAGACAGACTTTTaGGAATGCTTCTGTGTGCAGAAGTTTTACTGGAGCAACAAAGCC +
Preference number: 6 (lower is better)
Translates to: RRCADSGSYRLETDF*ECFCVQKFYWSNKA
Trigger: GGCTTTGTTGCTCCAGTAAAACTTCTGCACACAGAAGCATTCCAAAAAGTCTGTCTCCAGCCTGTAGGAGCCAGAATCTGCACAGCGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478562.1
CDS CAA 90 bp CCGTTCTCCTCTCTGAATGTGACAGTGAACTCACAATTAAGTAAGTaGGACAGCTTCCACTCCAGTGACCAGCCCCAGGATAGGGCTTTA +
Preference number: 6 (lower is better)
Translates to: PFSSLNVTVNSQLSK*DSFHSSDQPQDRAL
Trigger: TAAAGCCCTATCCTGGGGCTGGTCACTGGAGTGGAAGCTGTCCAACTTACTTAATTGTGAGTTCACTGTCACATTCAGAGAGGAGAACGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493270.1
CDS GCA 72 bp GACATCATACTGCTTGTCTGGCTGGAAGAGGTATCCTaGACACATCTGGTTGCATCCTTGGAGTATACCCTA +
Preference number: 6 (lower is better)
Translates to: DIILLVWLEEVS*THLVASLEYTL
Trigger: TAGGGTATACTCCAAGGATGCAACCAGATGTGTGCAGGATACCTCTTCCAGCCAGACAAGCAGTATGATGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478562.1
CDS CCA 72 bp CGTCTCAGATGCCATCCCTCTAAGGGGAAATGTGTATaGGTGTCTGGGATTGTTTCAAGATTGGGAAGTGCT +
Preference number: 6 (lower is better)
Translates to: RLRCHPSKGKCV*VSGIVSRLGSA
Trigger: AGCACTTCCCAATCTTGAAACAATCCCAGACACCCATACACATTTCCCCTTAGAGGGATGGCATCTGAGACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478562.1
CDS TCA 72 bp CAGCAAGCGGACATATTGGGAGGTGTTGGGGCTCTTTaGTTATTGTTTCTAAAAACGAACGCTGAGCTGGTG +
Preference number: 6 (lower is better)
Translates to: QQADILGGVGAL*LLFLKTNAELV
Trigger: CACCAGCTCAGCGTTCGTTTTTAGAAACAATAATCAAAGAGCCCCAACACCTCCCAATATGTCCGCTTGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462739.1
CDS GCA 72 bp GCAATTTCATATGTAAACCTCTGGAGGTCACAATCATaGTTTGGTTCTGCTCTGAGCCCCATCACCGTAGCA +
Preference number: 6 (lower is better)
Translates to: AISYVNLWRSQS*FGSALSPITVA
Trigger: TGCTACGGTGATGGGGCTCAGAGCAGAACCAAAGCATGATTGTGACCTCCAGAGGTTTACATATGAAATTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429023.1
CDS CCA 72 bp GATTGTTTCAAGATTGGGAAGTGCTACGGCATTCAGTaGGCCAGGGTTAGAGATAGAAAATTCCTCAGTGGG +
Preference number: 6 (lower is better)
Translates to: DCFKIGKCYGIQ*ARVRDRKFLSG
Trigger: CCCACTGAGGAATTTTCTATCTCTAACCCTGGCCCACTGAATGCCGTAGCACTTCCCAATCTTGAAACAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478562.1
CDS CCA 72 bp TGCTTGTCTGGCTGGAAGAGGTATCCTGCACACATCTaGTTGCATCCTTGGAGTATACCCTATCATGGAAAT +
Preference number: 6 (lower is better)
Translates to: CLSGWKRYPAHI*LHPWSIPYHGN
Trigger: ATTTCCATGATAGGGTATACTCCAAGGATGCAACCAGATGTGTGCAGGATACCTCTTCCAGCCAGACAAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478562.1
CDS CAA 72 bp TCTCTGAATGTGACAGTGAACTCACAATTAAGTAAGTaGGACAGCTTCCACTCCAGTGACCAGCCCCAGGAT +
Preference number: 6 (lower is better)
Translates to: SLNVTVNSQLSK*DSFHSSDQPQD
Trigger: ATCCTGGGGCTGGTCACTGGAGTGGAAGCTGTCCAACTTACTTAATTGTGAGTTCACTGTCACATTCAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493270.1
CDS CAA 72 bp CAGCTGCAGAGTGAATCAACTCTCCAAGCAGGGCTCTaGTTTCTCCTGAGAAAAGAAGTGAGTGTCTGTGTT +
Preference number: 6 (lower is better)
Translates to: QLQSESTLQAGL*FLLRKEVSVCV
Trigger: AACACAGACACTCACTTCTTTTCTCAGGAGAAACAAGAGCCCTGCTTGGAGAGTTGATTCACTCTGCAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493270.1
CDS CAA 90 bp CCTGAGGGTCAGCTGCAGAGTGAATCAACTCTCCAAGCAGGGCTCTaGTTTCTCCTGAGAAAAGAAGTGAGTGTCTGTGTTTTAAATACA +
Preference number: 6 (lower is better)
Translates to: PEGQLQSESTLQAGL*FLLRKEVSVCVLNT
Trigger: TGTATTTAAAACACAGACACTCACTTCTTTTCTCAGGAGAAACAAGAGCCCTGCTTGGAGAGTTGATTCACTCTGCAGCTGACCCTCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493270.1
CDS TCA 72 bp TGGGGCTCTTTGATTATTGTTTCTAAAAACGAACGCTaGGCTGGTGTCTCAAGAGACAAGGGAGGTCAGGAA +
Preference number: 6 (lower is better)
Translates to: WGSLIIVSKNER*AGVSRDKGGQE
Trigger: TTCCTGACCTCCCTTGTCTCTTGAGACACCAGCTCAGCGTTCGTTTTTAGAAACAATAATCAAAGAGCCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462739.1
CDS CCA 72 bp CTTCCAACCTTTCCAGGACCTCCTATGACATTAACATaGATTCCACATATGAGTGGACTAAAGACGCTGTGC +
Preference number: 6 (lower is better)
Translates to: LPTFPGPPMTLT*IPHMSGLKTLC
Trigger: GCACAGCGTCTTTAGTCCACTCATATGTGGAATCCATGTTAATGTCATAGGAGGTCCTGGAAAGGTTGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478562.1
CDS TCA 72 bp CAGGATCCTAACATTAGGCATGTGAAGAAGGGAATATaGGGCTCAACCATTTACAGCAGCTTTTGGGGCAAT +
Preference number: 6 (lower is better)
Translates to: QDPNIRHVKKGI*GSTIYSSFWGN
Trigger: ATTGCCCCAAAAGCTGCTGTAAATGGTTGAGCCTCATATTCCCTTCTTCACATGCCTAATGTTAGGATCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478562.1
CDS CCA 72 bp ACCTCCTATGACATTAACATGGATTCCACATATGAGTaGACTAAAGACGCTGTGCAGATTCTGGCTCCTACA +
Preference number: 6 (lower is better)
Translates to: TSYDINMDSTYE*TKDAVQILAPT
Trigger: TGTAGGAGCCAGAATCTGCACAGCGTCTTTAGTCCACTCATATGTGGAATCCATGTTAATGTCATAGGAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478562.1
CDS TCA 72 bp TTGGAAAAACTGCCATCCCTTTTGTCTCTGACTCTCTaGTTAGAAGATGATCTTTCCGTCTCAGATGCCATC +
Preference number: 6 (lower is better)
Translates to: LEKLPSLLSLTL*LEDDLSVSDAI
Trigger: GATGGCATCTGAGACGGAAAGATCATCTTCTAATCAGAGAGTCAGAGACAAAAGGGATGGCAGTTTTTCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478562.1
CDS CAA 72 bp AGAAGGTGCAGGAGTTGGAAAGACGCAACTGTTCTCTaGAGGAAAACACCCATTCCAACTCAAGTTAGTAAA +
Preference number: 6 (lower is better)
Translates to: RRCRSWKDATVL*RKTPIPTQVSK
Trigger: TTTACTAACTTGAGTTGGAATGGGTGTTTTCCTCAAGAGAACAGTTGCGTCTTTCCAACTCCTGCACCTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478562.1
CDS CAA 90 bp GAGACTTCGAGAAGGTGCAGGAGTTGGAAAGACGCAACTGTTCTCTaGAGGAAAACACCCATTCCAACTCAAGTTAGTAAATATTATCCA +
Preference number: 6 (lower is better)
Translates to: ETSRRCRSWKDATVL*RKTPIPTQVSKYYP
Trigger: TGGATAATATTTACTAACTTGAGTTGGAATGGGTGTTTTCCTCAAGAGAACAGTTGCGTCTTTCCAACTCCTGCACCTTCTCGAAGTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478562.1
CDS CAA 90 bp CAGCCTTTGTTAGTCATTAGTTCAGTAGCAAGGCAGATGATCCTATaGGCCAATTGTGAGAAGTTAAATCCATCGACATGCAACCAAAGG +
Preference number: 6 (lower is better)
Translates to: QPLLVISSVARQMIL*ANCEKLNPSTCNQR
Trigger: CCTTTGGTTGCATGTCGATGGATTTAACTTCTCACAATTGGCCAATAGGATCATCTGCCTTGCTACTGAACTAATGACTAACAAAGGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493875.5
ENST00000625689.2
CDS TCA 72 bp TTCAGTAGCAAGGCAGATGATCCTATTGGCCAATTGTaGGAAGTTAAATCCATCGACATGCAACCAAAGGTT +
Preference number: 6 (lower is better)
Translates to: FSSKADDPIGQL*EVKSIDMQPKV
Trigger: AACCTTTGGTTGCATGTCGATGGATTTAACTTCTCACAATTGGCCAATAGGATCATCTGCCTTGCTACTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493875.5
ENST00000625689.2
CDS CAA 72 bp TTAGTCATTAGTTCAGTAGCAAGGCAGATGATCCTATaGGCCAATTGTGAGAAGTTAAATCCATCGACATGC +
Preference number: 6 (lower is better)
Translates to: LVISSVARQMIL*ANCEKLNPSTC
Trigger: GCATGTCGATGGATTTAACTTCTCACAATTGGCCAATAGGATCATCTGCCTTGCTACTGAACTAATGACTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493875.5
ENST00000625689.2
CDS TCA 72 bp TTGGGGTCATATGCAATCTTTCTTCTGATGTCTTTATaGGGCCTTACACTTGTTCTGATGCCCTTTTCTAAA +
Preference number: 6 (lower is better)
Translates to: LGSYAIFLLMSL*GLTLVLMPFSK
Trigger: TTTAGAAAAGGGCATCAGAACAAGTGTAAGGCCTCATAAAGACATCAGAAGAAAGATTGCATATGACCCCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478562.1
CDS CAA 90 bp TTCCAACTCAAGTTAGTAAATATTATCCATGCCTATTCTCCTGAATaGACTAATCAAGTAGCAAACAAATGTTTTGCAGGCAGTCTCGGA +
Preference number: 6 (lower is better)
Translates to: FQLKLVNIIHAYSPE*TNQVANKCFAGSLG
Trigger: TCCGAGACTGCCTGCAAAACATTTGTTTGCTACTTGATTAGTCAATTCAGGAGAATAGGCATGGATAATATTTACTAACTTGAGTTGGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478562.1