Pregenerated sensors for GACAT2 (Homo sapiens)
Ensembl gene IDs: ENSG00000265962Ensembl transcript IDs: ENST00000579368.1
Found 14 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GGCAGGGCCTGCGGGCAGTGGCGTCTTAGTCGCCTTAGCACTGGGTaGTTAATCCGGCTCCATCTTTTCTCCACGGAGGGGGCCTGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: GRACGQWRLSRLSTG*LIRLHLFSTEGAWC Trigger: GCACCAGGCCCCCTCCGTGGAGAAAAGATGGAGCCGGATTAAGCACCCAGTGCTAAGGCGACTAAGACGCCACTGCCCGCAGGCCCTGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000579368.1 |
||
| CDS CCA 90 bp | GCCGCGCCGTTTTCGGTGAGCAAGCTGAAGCTCAGTAGAGGTCCTTaGAGTGTGGCCCGGGTTGAGGAGCAACGGTGTTGCGCGGGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: AAPFSVSKLKLSRGP*SVARVEEQRCCAGQ Trigger: CTGGCCCGCGCAACACCGTTGCTCCTCAACCCGGGCCACACTCCAAGGACCTCTACTGAGCTTCAGCTTGCTCACCGAAAACGGCGCGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000579368.1 |
||
| CDS TCA 90 bp | CCACGCCAGCACTTTCTAAGGAATCGCGGCGCCTGCTGCACTCTCTaGGTATTTTCCGGCAGGGCCTGCGGGCAGTGGCGTCTTAGTCGC | + |
|
Preference number: 5 (lower is better) Translates to: PRQHFLRNRGACCTL*VFSGRACGQWRLSR Trigger: GCGACTAAGACGCCACTGCCCGCAGGCCCTGCCGGAAAATACTCAGAGAGTGCAGCAGGCGCCGCGATTCCTTAGAAAGTGCTGGCGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000579368.1 |
||
| CDS GCA 90 bp | AGTAGAGGTCCTTGGAGTGTGGCCCGGGTTGAGGAGCAACGGTGTTaGGCGGGCCAGTCCTTTGTAAGCATCCAGGAGCCGGCTTTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: SRGPWSVARVEEQRC*AGQSFVSIQEPAFC Trigger: ACAGAAAGCCGGCTCCTGGATGCTTACAAAGGACTGGCCCGCGCAACACCGTTGCTCCTCAACCCGGGCCACACTCCAAGGACCTCTACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000579368.1 |
||
| CDS GCA 90 bp | TTTCAAATCTCTACTTCTGTTTCGACAGGTAATAATGTTGCCAGATaGCAGGGGTTCGGGCCAGGTCCAGTTGTCACTGTAGGAACAGGT | + |
|
Preference number: 5 (lower is better) Translates to: FQISTSVSTGNNVAR*QGFGPGPVVTVGTG Trigger: ACCTGTTCCTACAGTGACAACTGGACCTGGCCCGAACCCCTGGCATCTGGCAACATTATTACCTGTCGAAACAGAAGTAGAGATTTGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000579368.1 |
||
| CDS CCA 90 bp | AAACATACCCTTATTTTGTATGTAAAGATGAGCTTAGAGTTGGGCTaGAAAGCCAGACTTCCTTCCAGACAGCAGGAGGAAATGGGAACA | + |
|
Preference number: 5 (lower is better) Translates to: KHTLILYVKMSLELG*KARLPSRQQEEMGT Trigger: TGTTCCCATTTCCTCCTGCTGTCTGGAAGGAAGTCTGGCTTTCCAGCCCAACTCTAAGCTCATCTTTACATACAAAATAAGGGTATGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000579368.1 |
||
| CDS GCA 72 bp | CCTTGGAGTGTGGCCCGGGTTGAGGAGCAACGGTGTTaGGCGGGCCAGTCCTTTGTAAGCATCCAGGAGCCG | + |
|
Preference number: 6 (lower is better) Translates to: PWSVARVEEQRC*AGQSFVSIQEP Trigger: CGGCTCCTGGATGCTTACAAAGGACTGGCCCGCGCAACACCGTTGCTCCTCAACCCGGGCCACACTCCAAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000579368.1 |
||
| CDS CAA 72 bp | ATAATGCCACTGGAGGGCCCCCGGCTACGGACCCGCTaGCCCCTTCTCCTGCAATTACGGAAAGAGCTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: IMPLEGPRLRTR*PLLLQLRKELG Trigger: CCCCAGCTCTTTCCGTAATTGCAGGAGAAGGGGCAAGCGGGTCCGTAGCCGGGGGCCCTCCAGTGGCATTAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000579368.1 |
||
| CDS TCA 72 bp | CACTTTCTAAGGAATCGCGGCGCCTGCTGCACTCTCTaGGTATTTTCCGGCAGGGCCTGCGGGCAGTGGCGT | + |
|
Preference number: 6 (lower is better) Translates to: HFLRNRGACCTL*VFSGRACGQWR Trigger: ACGCCACTGCCCGCAGGCCCTGCCGGAAAATACTCAGAGAGTGCAGCAGGCGCCGCGATTCCTTAGAAAGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000579368.1 |
||
| CDS GCA 72 bp | TGCGGGCAGTGGCGTCTTAGTCGCCTTAGCACTGGGTaGTTAATCCGGCTCCATCTTTTCTCCACGGAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: CGQWRLSRLSTG*LIRLHLFSTEG Trigger: CCCCTCCGTGGAGAAAAGATGGAGCCGGATTAAGCACCCAGTGCTAAGGCGACTAAGACGCCACTGCCCGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000579368.1 |
||
| CDS CCA 72 bp | TTTTCGGTGAGCAAGCTGAAGCTCAGTAGAGGTCCTTaGAGTGTGGCCCGGGTTGAGGAGCAACGGTGTTGC | + |
|
Preference number: 6 (lower is better) Translates to: FSVSKLKLSRGP*SVARVEEQRCC Trigger: GCAACACCGTTGCTCCTCAACCCGGGCCACACTCCAAGGACCTCTACTGAGCTTCAGCTTGCTCACCGAAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000579368.1 |
||
| CDS GCA 72 bp | TCTACTTCTGTTTCGACAGGTAATAATGTTGCCAGATaGCAGGGGTTCGGGCCAGGTCCAGTTGTCACTGTA | + |
|
Preference number: 6 (lower is better) Translates to: STSVSTGNNVAR*QGFGPGPVVTV Trigger: TACAGTGACAACTGGACCTGGCCCGAACCCCTGGCATCTGGCAACATTATTACCTGTCGAAACAGAAGTAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000579368.1 |
||
| CDS CAA 72 bp | TTCAAATCTCTACTTCTGTTTCGACAGGTAATAATGTaGCCAGATGCCAGGGGTTCGGGCCAGGTCCAGTTG | + |
|
Preference number: 6 (lower is better) Translates to: FKSLLLFRQVIM*PDARGSGQVQL Trigger: CAACTGGACCTGGCCCGAACCCCTGGCATCTGGCAACATTATTACCTGTCGAAACAGAAGTAGAGATTTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000579368.1 |
||
| CDS CCA 72 bp | CTTATTTTGTATGTAAAGATGAGCTTAGAGTTGGGCTaGAAAGCCAGACTTCCTTCCAGACAGCAGGAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: LILYVKMSLELG*KARLPSRQQEE Trigger: TTCCTCCTGCTGTCTGGAAGGAAGTCTGGCTTTCCAGCCCAACTCTAAGCTCATCTTTACATACAAAATAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000579368.1 |
||