Pregenerated sensors for GACAT1 (Homo sapiens)
Ensembl gene IDs: ENSG00000232991Ensembl transcript IDs: ENST00000419650.1, ENST00000441383.5
Found 12 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CAGAGAAGCAGACCAGGTTTCTGGACTCTAGAAAGGGTCTCTGGCTaGGGTGATTTCACTGATAATCTGGAGCAGGCTACAGGGCAACAG | + |
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Preference number: 5 (lower is better) Translates to: QRSRPGFWTLERVSG*GDFTDNLEQATGQQ Trigger: CTGTTGCCCTGTAGCCTGCTCCAGATTATCAGTGAAATCACCGCAGCCAGAGACCCTTTCTAGAGTCCAGAAACCTGGTCTGCTTCTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000419650.1 ENST00000441383.5 |
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| CDS CCA 90 bp | GTGTCTTCAGAAGGAGGCTTAGCCCAGAGAAGCAGACCAGGTTTCTaGACTCTAGAAAGGGTCTCTGGCTGCGGTGATTTCACTGATAAT | + |
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Preference number: 5 (lower is better) Translates to: VSSEGGLAQRSRPGF*TLERVSGCGDFTDN Trigger: ATTATCAGTGAAATCACCGCAGCCAGAGACCCTTTCTAGAGTCCAGAAACCTGGTCTGCTTCTCTGGGCTAAGCCTCCTTCTGAAGACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000419650.1 ENST00000441383.5 |
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| CDS CCA 90 bp | ATATTTCCTGGGATTTCAAATGAGAAGGCTGTCAGAACAAGCTTCTaGGTAAGCAGGTATCAGATTGCCAAGTGCTTGCACACTCATTTC | + |
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Preference number: 5 (lower is better) Translates to: IFPGISNEKAVRTSF*VSRYQIAKCLHTHF Trigger: GAAATGAGTGTGCAAGCACTTGGCAATCTGATACCTGCTTACCCAGAAGCTTGTTCTGACAGCCTTCTCATTTGAAATCCCAGGAAATAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441383.5 |
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| CDS GCA 90 bp | ATGTATTCAGAATCAAATTGTTCTAATTCTGCTCCGGAACAGGAATaGAAGGCTGCTCTTGACGCTGGAAAAGCCAAAGCTAGGGATTTT | + |
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Preference number: 5 (lower is better) Translates to: MYSESNCSNSAPEQE*KAALDAGKAKARDF Trigger: AAAATCCCTAGCTTTGGCTTTTCCAGCGTCAAGAGCAGCCTTGCATTCCTGTTCCGGAGCAGAATTAGAACAATTTGATTCTGAATACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000419650.1 ENST00000441383.5 |
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| CDS CCA 72 bp | GAAGGAGGCTTAGCCCAGAGAAGCAGACCAGGTTTCTaGACTCTAGAAAGGGTCTCTGGCTGCGGTGATTTC | + |
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Preference number: 6 (lower is better) Translates to: EGGLAQRSRPGF*TLERVSGCGDF Trigger: GAAATCACCGCAGCCAGAGACCCTTTCTAGAGTCCAGAAACCTGGTCTGCTTCTCTGGGCTAAGCCTCCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000419650.1 ENST00000441383.5 |
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| CDS CCA 72 bp | AAAGGGTCTCTGGCTGCGGTGATTTCACTGATAATCTaGAGCAGGCTACAGGGCAACAGAACAGCTGATGGG | + |
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Preference number: 6 (lower is better) Translates to: KGSLAAVISLII*SRLQGNRTADG Trigger: CCCATCAGCTGTTCTGTTGCCCTGTAGCCTGCTCCAGATTATCAGTGAAATCACCGCAGCCAGAGACCCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000419650.1 ENST00000441383.5 |
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| CDS GCA 72 bp | AGACCAGGTTTCTGGACTCTAGAAAGGGTCTCTGGCTaGGGTGATTTCACTGATAATCTGGAGCAGGCTACA | + |
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Preference number: 6 (lower is better) Translates to: RPGFWTLERVSG*GDFTDNLEQAT Trigger: TGTAGCCTGCTCCAGATTATCAGTGAAATCACCGCAGCCAGAGACCCTTTCTAGAGTCCAGAAACCTGGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000419650.1 ENST00000441383.5 |
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| CDS CCA 72 bp | GCTTGTATCCTGAAATCACACTTCCTGGCATGGTCCTaGATCTGCCACTTACTAGCTCTGTGTTCTTGGCTG | + |
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Preference number: 6 (lower is better) Translates to: ACILKSHFLAWS*ICHLLALCSWL Trigger: CAGCCAAGAACACAGAGCTAGTAAGTGGCAGATCCAGGACCATGCCAGGAAGTGTGATTTCAGGATACAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419650.1 |
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| CDS CAA 90 bp | CAAATTGTTCTAATTCTGCTCCGGAACAGGAATGCAAGGCTGCTCTaGACGCTGGAAAAGCCAAAGCTAGGGATTTTCCTCCGGTGTCTT | + |
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Preference number: 6 (lower is better) Translates to: QIVLILLRNRNARLL*TLEKPKLGIFLRCL Trigger: AAGACACCGGAGGAAAATCCCTAGCTTTGGCTTTTCCAGCGTCAAGAGCAGCCTTGCATTCCTGTTCCGGAGCAGAATTAGAACAATTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000419650.1 ENST00000441383.5 |
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| CDS CCA 72 bp | GGGATTTCAAATGAGAAGGCTGTCAGAACAAGCTTCTaGGTAAGCAGGTATCAGATTGCCAAGTGCTTGCAC | + |
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Preference number: 6 (lower is better) Translates to: GISNEKAVRTSF*VSRYQIAKCLH Trigger: GTGCAAGCACTTGGCAATCTGATACCTGCTTACCCAGAAGCTTGTTCTGACAGCCTTCTCATTTGAAATCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441383.5 |
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| CDS GCA 72 bp | GAATCAAATTGTTCTAATTCTGCTCCGGAACAGGAATaGAAGGCTGCTCTTGACGCTGGAAAAGCCAAAGCT | + |
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Preference number: 6 (lower is better) Translates to: ESNCSNSAPEQE*KAALDAGKAKA Trigger: AGCTTTGGCTTTTCCAGCGTCAAGAGCAGCCTTGCATTCCTGTTCCGGAGCAGAATTAGAACAATTTGATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000419650.1 ENST00000441383.5 |
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| CDS GCA 72 bp | TGTCAGAACAAGCTTCTGGGTAAGCAGGTATCAGATTaGCAAGTGCTTGCACACTCATTTCATTTAATACCT | + |
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Preference number: 6 (lower is better) Translates to: CQNKLLGKQVSD*QVLAHSFHLIP Trigger: AGGTATTAAATGAAATGAGTGTGCAAGCACTTGGCAATCTGATACCTGCTTACCCAGAAGCTTGTTCTGACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441383.5 |
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