RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GABRP (Homo sapiens)

Ensembl gene IDs: ENSG00000094755

Ensembl transcript IDs: ENST00000265294.9, ENST00000518122.5, ENST00000518525.5, ENST00000519137.1, ENST00000519196.5, ENST00000519385.5, ENST00000519598.1, ENST00000521009.5, ENST00000521481.5, ENST00000522868.5

Found 366 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTGTTGGCTGAGACTGGCCGAGGAATGTGCATCTCTGGCTGGATTTaGAGAGGGCAGCTCACCCGCAACCTGAACATAGGTTCTGTAACG +
Preference number: 1 (lower is better)
Translates to: LLAETGRGMCISGWI*RGQLTRNLNIGSVT
Trigger: CGTTACAGAACCTATGTTCAGGTTGCGGGTGAGCTGCCCTCTCCAAATCCAGCCAGAGATGCACATTCCTCGGCCAGTCTCAGCCAACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
3UTR CCA 90 bp TTGGTACTGTTGGCTGAGACTGGCCGAGGAATGTGCATCTCTGGCTaGATTTGGAGAGGGCAGCTCACCCGCAACCTGAACATAGGTTCT +
Preference number: 1 (lower is better)
Translates to: LVLLAETGRGMCISG*IWRGQLTRNLNIGS
Trigger: AGAACCTATGTTCAGGTTGCGGGTGAGCTGCCCTCTCCAAATCCAGCCAGAGATGCACATTCCTCGGCCAGTCTCAGCCAACAGTACCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
3UTR GCA 90 bp CAAAAATCACTTTTGGTACTGTTGGCTGAGACTGGCCGAGGAATGTaGATCTCTGGCTGGATTTGGAGAGGGCAGCTCACCCGCAACCTG +
Preference number: 1 (lower is better)
Translates to: QKSLLVLLAETGRGM*ISGWIWRGQLTRNL
Trigger: CAGGTTGCGGGTGAGCTGCCCTCTCCAAATCCAGCCAGAGATGCACATTCCTCGGCCAGTCTCAGCCAACAGTACCAAAAGTGATTTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
3UTR TCA 90 bp GCCTTTACCCTGGCACACTCAAAAATCACTTTTGGTACTGTTGGCTaGGACTGGCCGAGGAATGTGCATCTCTGGCTGGATTTGGAGAGG +
Preference number: 1 (lower is better)
Translates to: AFTLAHSKITFGTVG*DWPRNVHLWLDLER
Trigger: CCTCTCCAAATCCAGCCAGAGATGCACATTCCTCGGCCAGTCTCAGCCAACAGTACCAAAAGTGATTTTTGAGTGTGCCAGGGTAAAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
3UTR TCA 90 bp CGGGATAAGCCACTCATAGCAGACCAGCTGGAAGGATCAGGGATCTaGGCAAAGCCAAGTTTACTTAAGCTAAGCCACTTGTTCCTGGGT +
Preference number: 1 (lower is better)
Translates to: RDKPLIADQLEGSGI*AKPSLLKLSHLFLG
Trigger: ACCCAGGAACAAGTGGCTTAGCTTAAGTAAACTTGGCTTTGCTCAGATCCCTGATCCTTCCAGCTGGTCTGCTATGAGTGGCTTATCCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
3UTR CCA 90 bp GGAAGCCTTTACCCTGGCACACTCAAAAATCACTTTTGGTACTGTTaGCTGAGACTGGCCGAGGAATGTGCATCTCTGGCTGGATTTGGA +
Preference number: 1 (lower is better)
Translates to: GSLYPGTLKNHFWYC*LRLAEECASLAGFG
Trigger: TCCAAATCCAGCCAGAGATGCACATTCCTCGGCCAGTCTCAGCCAACAGTACCAAAAGTGATTTTTGAGTGTGCCAGGGTAAAGGCTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
3UTR TCA 90 bp CTGACACTTGAGGGTTACCCAATGGTCTCCTTCCCATTCTTTATATaGGGTAAATGCAAACCAGGGAGCCACCGAATAAACAGCCCTGAG +
Preference number: 1 (lower is better)
Translates to: LTLEGYPMVSFPFFI*GKCKPGSHRINSPE
Trigger: CTCAGGGCTGTTTATTCGGTGGCTCCCTGGTTTGCATTTACCTCATATAAAGAATGGGAAGGAGACCATTGGGTAACCCTCAAGTGTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
3UTR TCA 90 bp CTTGTTCCTGGGTCAAGCAGTTTGTTTTCTAATAAGCATCATTCCTaGTCATTAGAGCAAAGGGATGAATGCTCCTCTTGGAATGATACA +
Preference number: 1 (lower is better)
Translates to: LVPGSSSLFSNKHHS*SLEQRDECSSWNDT
Trigger: TGTATCATTCCAAGAGGAGCATTCATCCCTTTGCTCTAATGATCAGGAATGATGCTTATTAGAAAACAAACTGCTTGACCCAGGAACAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
3UTR GCA 90 bp GACTCAAATATTATTTCAGTCACTTGTAGCACCATTGGATGTGGGTaGACACTTGGCCTAAAATACCATTTACATCATTATCTTGTCCTG +
Preference number: 1 (lower is better)
Translates to: DSNIISVTCSTIGCG*TLGLKYHLHHYLVL
Trigger: CAGGACAAGATAATGATGTAAATGGTATTTTAGGCCAAGTGTGCACCCACATCCAATGGTGCTACAAGTGACTGAAATAATATTTGAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
3UTR CCA 90 bp ATCTTGGGCTCCATGGGAATGTCCTTGATTAAGATGAAAGAGGAATaGACTGATGTTTCTATTACAAGATCCTATAATGCTAGGACTTCT +
Preference number: 1 (lower is better)
Translates to: ILGSMGMSLIKMKEE*TDVSITRSYNARTS
Trigger: AGAAGTCCTAGCATTATAGGATCTTGTAATAGAAACATCAGTCCATTCCTCTTTCATCTTAATCAAGGACATTCCCATGGAGCCCAAGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
3UTR CAA 90 bp AGGCTGAACTGGAAGCCTTTACCCTGGCACACTCAAAAATCACTTTaGGTACTGTTGGCTGAGACTGGCCGAGGAATGTGCATCTCTGGC +
Preference number: 2 (lower is better)
Translates to: RLNWKPLPWHTQKSL*VLLAETGRGMCISG
Trigger: GCCAGAGATGCACATTCCTCGGCCAGTCTCAGCCAACAGTACCAAAAGTGATTTTTGAGTGTGCCAGGGTAAAGGCTTCCAGTTCAGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
3UTR CAA 90 bp TGGAAGCCTTTACCCTGGCACACTCAAAAATCACTTTTGGTACTGTaGGCTGAGACTGGCCGAGGAATGTGCATCTCTGGCTGGATTTGG +
Preference number: 2 (lower is better)
Translates to: WKPLPWHTQKSLLVL*AETGRGMCISGWIW
Trigger: CCAAATCCAGCCAGAGATGCACATTCCTCGGCCAGTCTCAGCCAACAGTACCAAAAGTGATTTTTGAGTGTGCCAGGGTAAAGGCTTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
3UTR-3UTR GCA 90 bp ATACAACCACATTTCACCTCTTTTCACCAGCACTCCCACCCATTCCCGTTAGAAACTGGCCGAGGAATGTaGATCTCTGGCTGGATTTGG +
Preference number: 2 (lower is better)
Translates to: IQPHFTSFHQHSHPFPLETGRGM*ISGWIW
Trigger: CCAAATCCAGCCAGAGATGCACATTCCTCGGCCAGT...TTCTAACGGGAATGGGTGGGAGTGCTGGTGAAAAGAGGTGAAATGTGGTTGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
3UTR-3UTR TCA 90 bp ATACAACCACATTTCACCTCTTTTCACCAGCACTCCCACCCATTCCCGTTAGAAGCAGCAATGACAGAATaGCAGCGACTCTCTGAGTCA +
Preference number: 2 (lower is better)
Translates to: IQPHFTSFHQHSHPFPLEAAMTE*QRLSES
Trigger: TGACTCAGAGAGTCGCTGTCATTCTGTCATTGCTGC...TTCTAACGGGAATGGGTGGGAGTGCTGGTGAAAAGAGGTGAAATGTGGTTGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
3UTR-3UTR TCA 90 bp CAGCTCACCCGCAACCTGAACATAGGTTCTGTAACGTATCTCATTGTTACTCAGATGCTCCTCTTGGAATaGTACAGGGGATCTGCCACT +
Preference number: 2 (lower is better)
Translates to: QLTRNLNIGSVTYLIVTQMLLLE*YRGSAT
Trigger: AGTGGCAGATCCCCTGTATCATTCCAAGAGGAGCAT...CTGAGTAACAATGAGATACGTTACAGAACCTATGTTCAGGTTGCGGGTGAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
3UTR-3UTR GCA 90 bp GAAGCTAAGAAATTAAAGATGGCGAGATTGTCTAAAATAACTGAGGCTGAACTGGGGCCAGCACGCTCCTaGTCATGCGGGATAAGCCAC +
Preference number: 2 (lower is better)
Translates to: EAKKLKMARLSKITEAELGPARS*SCGISH
Trigger: GTGGCTTATCCCGCATGAGCAGGAGCGTGCTGGCCC...CAGTTCAGCCTCAGTTATTTTAGACAATCTCGCCATCTTTAATTTCTTAGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
3UTR-3UTR GCA 90 bp ACCACATTTCACCTCTTTTCACCAGCACTCCCACCCATTCCCGTTAGAAATATTATGATACAGGGGATCTaGCACTGGGAGAGTGTTGCT +
Preference number: 2 (lower is better)
Translates to: TTFHLFSPALPPIPVRNIMIQGI*HWESVA
Trigger: AGCAACACTCTCCCAGTGGCAGATCCCCTGTATCAT...AATATTTCTAACGGGAATGGGTGGGAGTGCTGGTGAAAAGAGGTGAAATGTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
3UTR-3UTR CCA 90 bp TTAGAGCAAAGGGATGAATGCTCCTCTTGGAATGATACAGGGGATCTGCCACTGTTCTGCAAGCCTTCATaGCAACAGCCCATATTAAGA +
Preference number: 2 (lower is better)
Translates to: LEQRDECSSWNDTGDLPLFCKPS*QQPILR
Trigger: TCTTAATATGGGCTGTTGCCATGAAGGCTTGCAGAA...CAGTGGCAGATCCCCTGTATCATTCCAAGAGGAGCATTCATCCCTTTGCTCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
3UTR-3UTR TCA 90 bp ATACAACCACATTTCACCTCTTTTCACCAGCACTCCCACCCATTCCCGTTAGAAATTATCTTGTCCTGTTaGAGACCTATGGCATGCAAG +
Preference number: 2 (lower is better)
Translates to: IQPHFTSFHQHSHPFPLEIILSC*RPMACK
Trigger: CTTGCATGCCATAGGTCTTCAACAGGACAAGATAAT...TTCTAACGGGAATGGGTGGGAGTGCTGGTGAAAAGAGGTGAAATGTGGTTGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
3UTR-3UTR GCA 90 bp CCACATTTCACCTCTTTTCACCAGCACTCCCACCCATTCCCGTTAGAAATATTTACCATTGGATGTGGGTaGACACTTGGCCTAAAATAC +
Preference number: 2 (lower is better)
Translates to: PHFTSFHQHSHPFPLEIFTIGCG*TLGLKY
Trigger: GTATTTTAGGCCAAGTGTGCACCCACATCCAATGGT...AAATATTTCTAACGGGAATGGGTGGGAGTGCTGGTGAAAAGAGGTGAAATGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
3UTR-3UTR CCA 90 bp TTTCACCTCTTTTCACCAGCACTCCCACCCATTCCCGTTAGAAATATTTTGTTAAGGAATGTGCATCTCTaGCTGGATTTGGAGAGGGCA +
Preference number: 2 (lower is better)
Translates to: FHLFSPALPPIPVRNILLRNVHL*LDLERA
Trigger: TGCCCTCTCCAAATCCAGCCAGAGATGCACATTCCT...TAACAAAATATTTCTAACGGGAATGGGTGGGAGTGCTGGTGAAAAGAGGTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
3UTR-3UTR CCA 90 bp TTAGAGCAAAGGGATGAATGCTCCTCTTGGAATGATACAGGGGATCTGCCACTGATTTCCATCCATGCATaGGAAAAGGGCTTTAGTATA +
Preference number: 2 (lower is better)
Translates to: LEQRDECSSWNDTGDLPLISIHA*EKGFSI
Trigger: TATACTAAAGCCCTTTTCCCATGCATGGATGGAAAT...CAGTGGCAGATCCCCTGTATCATTCCAAGAGGAGCATTCATCCCTTTGCTCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
3UTR-3UTR CCA 90 bp GCTAGGACTTCTACACAGCTTAGAACAATGGTTGGAGCTTCATTCTTTGAGCAGAGTCAACGTTGTCGCTaGAAATTTCAATGCTGGCAA +
Preference number: 2 (lower is better)
Translates to: ARTSTQLRTMVGASFFEQSQRCR*KFQCWQ
Trigger: TTGCCAGCATTGAAATTTCCAGCGACAACGTTGACT...CTGCTCAAAGAATGAAGCTCCAACCATTGTTCTAAGCTGTGTAGAAGTCCTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519385.5
3UTR-3UTR TCA 90 bp CAGCTCACCCGCAACCTGAACATAGGTTCTGTAACGTATCTCATTGTTACTCAGAATAAGCATCATTCCTaGTCATTAGAGCAAAGGGAT +
Preference number: 2 (lower is better)
Translates to: QLTRNLNIGSVTYLIVTQNKHHS*SLEQRD
Trigger: ATCCCTTTGCTCTAATGATCAGGAATGATGCTTATT...CTGAGTAACAATGAGATACGTTACAGAACCTATGTTCAGGTTGCGGGTGAGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
3UTR-3UTR CCA 90 bp CCACATTTCACCTCTTTTCACCAGCACTCCCACCCATTCCCGTTAGAAATATTTAGAGTCCTTCCAGTATaGGGAATCCATTGTATCTTA +
Preference number: 2 (lower is better)
Translates to: PHFTSFHQHSHPFPLEIFRVLPV*GIHCIL
Trigger: TAAGATACAATGGATTCCCCATACTGGAAGGACTCT...AAATATTTCTAACGGGAATGGGTGGGAGTGCTGGTGAAAAGAGGTGAAATGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
3UTR-3UTR TCA 90 bp GAACAGGAAGCTAAGAAATTAAAGATGGCGAGATTGTCTAAAATAACTGAGGCTACAACTTCTGACACTTaGGGGTTACCCAATGGTCTC +
Preference number: 2 (lower is better)
Translates to: EQEAKKLKMARLSKITEATTSDT*GLPNGL
Trigger: GAGACCATTGGGTAACCCTCAAGTGTCAGAAGTTGT...AGCCTCAGTTATTTTAGACAATCTCGCCATCTTTAATTTCTTAGCTTCCTGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
3UTR CAA 90 bp ACAGCCCTGAGTACATTTGTAATCTTGGGCTCCATGGGAATGTCCTaGATTAAGATGAAAGAGGAATGGACTGATGTTTCTATTACAAGA +
Preference number: 2 (lower is better)
Translates to: TALSTFVILGSMGMS*IKMKEEWTDVSITR
Trigger: TCTTGTAATAGAAACATCAGTCCATTCCTCTTTCATCTTAATCAAGGACATTCCCATGGAGCCCAAGATTACAAATGTACTCAGGGCTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
3UTR-3UTR TCA 90 bp ACCATTGGATGTGGGTGCACACTTGGCCTAAAATACCATTTACATCATTATCTTATTATCTTGTCCTGTTaGAGACCTATGGCATGCAAG +
Preference number: 2 (lower is better)
Translates to: TIGCGCTLGLKYHLHHYLIILSC*RPMACK
Trigger: CTTGCATGCCATAGGTCTTCAACAGGACAAGATAAT...AAGATAATGATGTAAATGGTATTTTAGGCCAAGTGTGCACCCACATCCAATGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
3UTR-3UTR TCA 90 bp AAATGGACTCAATTCTGCAAGCCTTCATGGCAACAGCCCATATTAAGACTTCTATTCCCATTCTTTATATaGGGTAAATGCAAACCAGGG +
Preference number: 2 (lower is better)
Translates to: KWTQFCKPSWQQPILRLLFPFFI*GKCKPG
Trigger: CCCTGGTTTGCATTTACCTCATATAAAGAATGGGAA...TAGAAGTCTTAATATGGGCTGTTGCCATGAAGGCTTGCAGAATTGAGTCCATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
3UTR-3UTR GCA 90 bp GGACTGATGTTTCTATTACAAGATCCTATAATGCTAGGACTTCTACACAGCTTAACCATTGGATGTGGGTaGACACTTGGCCTAAAATAC +
Preference number: 2 (lower is better)
Translates to: GLMFLLQDPIMLGLLHSLTIGCG*TLGLKY
Trigger: GTATTTTAGGCCAAGTGTGCACCCACATCCAATGGT...TAAGCTGTGTAGAAGTCCTAGCATTATAGGATCTTGTAATAGAAACATCAGTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
3UTR-3UTR GCA 90 bp GAATGGACTGATGTTTCTATTACAAGATCCTATAATGCTAGGACTTCTACACAGACCATTGGATGTGGGTaGACACTTGGCCTAAAATAC +
Preference number: 2 (lower is better)
Translates to: EWTDVSITRSYNARTSTQTIGCG*TLGLKY
Trigger: GTATTTTAGGCCAAGTGTGCACCCACATCCAATGGT...CTGTGTAGAAGTCCTAGCATTATAGGATCTTGTAATAGAAACATCAGTCCATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
3UTR-3UTR CCA 90 bp CCCATCTTTTCTCGGAAGACAAACTTGAACTTGTCGCTGGTTTTCATTGTCAAGCCTGTTGAAGACCTATaGCATGCAAGAAATTTAACA +
Preference number: 2 (lower is better)
Translates to: PIFSRKTNLNLSLVFIVKPVEDL*HARNLT
Trigger: TGTTAAATTTCTTGCATGCCATAGGTCTTCAACAGG...CTTGACAATGAAAACCAGCGACAAGTTCAAGTTTGTCTTCCGAGAAAAGATGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519385.5
3UTR-3UTR CCA 90 bp CACCATTGGATGTGGGTGCACACTTGGCCTAAAATACCATTTACATCATTATCTCACAGCTTAGAACAATaGTTGGAGCTTCATTCTTTG +
Preference number: 2 (lower is better)
Translates to: HHWMWVHTWPKIPFTSLSHSLEQ*LELHSL
Trigger: CAAAGAATGAAGCTCCAACCATTGTTCTAAGCTGTG...AGATAATGATGTAAATGGTATTTTAGGCCAAGTGTGCACCCACATCCAATGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
3UTR CAA 90 bp CTAGGACTTCTACACAGCTTAGAACAATGGTTGGAGCTTCATTCTTaGAGCAGAAAGACTCAAATATTATTTCAGTCACTTGTAGCACCA +
Preference number: 2 (lower is better)
Translates to: LGLLHSLEQWLELHS*SRKTQILFQSLVAP
Trigger: TGGTGCTACAAGTGACTGAAATAATATTTGAGTCTTTCTGCTCAAAGAATGAAGCTCCAACCATTGTTCTAAGCTGTGTAGAAGTCCTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
3UTR-3UTR TCA 90 bp AATGGACTGATGTTTCTATTACAAGATCCTATAATGCTAGGACTTCTACACAGCATTATCTTGTCCTGTTaGAGACCTATGGCATGCAAG +
Preference number: 2 (lower is better)
Translates to: NGLMFLLQDPIMLGLLHSIILSC*RPMACK
Trigger: CTTGCATGCCATAGGTCTTCAACAGGACAAGATAAT...GCTGTGTAGAAGTCCTAGCATTATAGGATCTTGTAATAGAAACATCAGTCCATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
3UTR-3UTR TCA 90 bp CAGAAAGACTCAAATATTATTTCAGTCACTTGTAGCACCATTGGATGTGGGTGCTGGAGCTTCATTCTTTaGGCAGAAAGACTCAAATAT +
Preference number: 2 (lower is better)
Translates to: QKDSNIISVTCSTIGCGCWSFIL*AERLKY
Trigger: ATATTTGAGTCTTTCTGCTCAAAGAATGAAGCTCCA...GCACCCACATCCAATGGTGCTACAAGTGACTGAAATAATATTTGAGTCTTTCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
3UTR-3UTR CCA 90 bp GAAATAATCAACAATCCTGCCCATCTTTTCTCGGAAGACAAACTTGAACTTGTCATGTGGGTGCACACTTaGCCTAAAATACCATTTACA +
Preference number: 2 (lower is better)
Translates to: EIINNPAHLFSEDKLELVMWVHT*PKIPFT
Trigger: TGTAAATGGTATTTTAGGCCAAGTGTGCACCCACAT...GACAAGTTCAAGTTTGTCTTCCGAGAAAAGATGGGCAGGATTGTTGATTATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519385.5
3UTR-3UTR CCA 90 bp GAAGCTAAGAAATTAAAGATGGCGAGATTGTCTAAAATAACTGAGGCTGAACTGTTGAGGGTTACCCAATaGTCTCCTTCCCATTCTTTA +
Preference number: 2 (lower is better)
Translates to: EAKKLKMARLSKITEAELLRVTQ*SPSHSL
Trigger: TAAAGAATGGGAAGGAGACCATTGGGTAACCCTCAA...CAGTTCAGCCTCAGTTATTTTAGACAATCTCGCCATCTTTAATTTCTTAGCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
3UTR-3UTR CCA 90 bp TGGTTTATTTCTGACAGGAAAGGTAAAGCCGTGCATTTATTAGAACAGGAAGCTAGAGTCCTTCCAGTATaGGGAATCCATTGTATCTTA +
Preference number: 2 (lower is better)
Translates to: WFISDRKGKAVHLLEQEARVLPV*GIHCIL
Trigger: TAAGATACAATGGATTCCCCATACTGGAAGGACTCT...AGCTTCCTGTTCTAATAAATGCACGGCTTTACCTTTCCTGTCAGAAATAAACCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
3UTR-3UTR TCA 90 bp GAAGCTAAGAAATTAAAGATGGCGAGATTGTCTAAAATAACTGAGGCTGAACTGAACTCATCTTGGTATTaGGTTAGTGCATTGACTTCC +
Preference number: 2 (lower is better)
Translates to: EAKKLKMARLSKITEAELNSSWY*VSALTS
Trigger: GGAAGTCAATGCACTAACTCAATACCAAGATGAGTT...CAGTTCAGCCTCAGTTATTTTAGACAATCTCGCCATCTTTAATTTCTTAGCTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
3UTR-3UTR CCA 90 bp AATGGACTGATGTTTCTATTACAAGATCCTATAATGCTAGGACTTCTACACAGCCACAGCTTAGAACAATaGTTGGAGCTTCATTCTTTG +
Preference number: 2 (lower is better)
Translates to: NGLMFLLQDPIMLGLLHSHSLEQ*LELHSL
Trigger: CAAAGAATGAAGCTCCAACCATTGTTCTAAGCTGTG...GCTGTGTAGAAGTCCTAGCATTATAGGATCTTGTAATAGAAACATCAGTCCATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
3UTR CAA 90 bp CAAGATCCTATAATGCTAGGACTTCTACACAGCTTAGAACAATGGTaGGAGCTTCATTCTTTGAGCAGAAAGACTCAAATATTATTTCAG +
Preference number: 2 (lower is better)
Translates to: QDPIMLGLLHSLEQW*ELHSLSRKTQILFQ
Trigger: CTGAAATAATATTTGAGTCTTTCTGCTCAAAGAATGAAGCTCCAACCATTGTTCTAAGCTGTGTAGAAGTCCTAGCATTATAGGATCTTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
3UTR-3UTR TCA 90 bp GTTTCTATTACAAGATCCTATAATGCTAGGACTTCTACACAGCTTAGAACAATGTTTAGAAACAACTTCTaGCACTTGAGGGTTACCCAA +
Preference number: 2 (lower is better)
Translates to: VSITRSYNARTSTQLRTMFRNNF*HLRVTQ
Trigger: TTGGGTAACCCTCAAGTGTCAGAAGTTGTTTCTAAA...CATTGTTCTAAGCTGTGTAGAAGTCCTAGCATTATAGGATCTTGTAATAGAAAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
3UTR-3UTR CCA 90 bp TATAATGCTAGGACTTCTACACAGCTTAGAACAATGGTTGGAGCTTCATTCTTTCCTGTTGAAGACCTATaGCATGCAAGAAATTTAACA +
Preference number: 2 (lower is better)
Translates to: YNARTSTQLRTMVGASFFPVEDL*HARNLT
Trigger: TGTTAAATTTCTTGCATGCCATAGGTCTTCAACAGG...AAAGAATGAAGCTCCAACCATTGTTCTAAGCTGTGTAGAAGTCCTAGCATTATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
3UTR-3UTR CCA 90 bp AAGATGAAAGAGGAATGGACTGATGTTTCTATTACAAGATCCTATAATGCTAGGATGTGGGTGCACACTTaGCCTAAAATACCATTTACA +
Preference number: 2 (lower is better)
Translates to: KMKEEWTDVSITRSYNARMWVHT*PKIPFT
Trigger: TGTAAATGGTATTTTAGGCCAAGTGTGCACCCACAT...CCTAGCATTATAGGATCTTGTAATAGAAACATCAGTCCATTCCTCTTTCATCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
3UTR-3UTR TCA 90 bp GTTTCTATTACAAGATCCTATAATGCTAGGACTTCTACACAGCTTAGAACAATGGAAAGAGGAATGGACTaGTGTTTCTATTACAAGATC +
Preference number: 2 (lower is better)
Translates to: VSITRSYNARTSTQLRTMERGMD*CFYYKI
Trigger: GATCTTGTAATAGAAACATCAGTCCATTCCTCTTTC...CATTGTTCTAAGCTGTGTAGAAGTCCTAGCATTATAGGATCTTGTAATAGAAAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
3UTR-3UTR CCA 90 bp GTTTCTATTACAAGATCCTATAATGCTAGGACTTCTACACAGCTTAGAACAATGCCTGTTGAAGACCTATaGCATGCAAGAAATTTAACA +
Preference number: 2 (lower is better)
Translates to: VSITRSYNARTSTQLRTMPVEDL*HARNLT
Trigger: TGTTAAATTTCTTGCATGCCATAGGTCTTCAACAGG...CATTGTTCTAAGCTGTGTAGAAGTCCTAGCATTATAGGATCTTGTAATAGAAAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
3UTR CCA 72 bp TTGGCTGAGACTGGCCGAGGAATGTGCATCTCTGGCTaGATTTGGAGAGGGCAGCTCACCCGCAACCTGAAC +
Preference number: 3 (lower is better)
Translates to: LAETGRGMCISG*IWRGQLTRNLN
Trigger: GTTCAGGTTGCGGGTGAGCTGCCCTCTCCAAATCCAGCCAGAGATGCACATTCCTCGGCCAGTCTCAGCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
3UTR CCA 72 bp GAGACTGGCCGAGGAATGTGCATCTCTGGCTGGATTTaGAGAGGGCAGCTCACCCGCAACCTGAACATAGGT +
Preference number: 3 (lower is better)
Translates to: ETGRGMCISGWI*RGQLTRNLNIG
Trigger: ACCTATGTTCAGGTTGCGGGTGAGCTGCCCTCTCCAAATCCAGCCAGAGATGCACATTCCTCGGCCAGTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
3UTR TCA 72 bp CTGGCACACTCAAAAATCACTTTTGGTACTGTTGGCTaGGACTGGCCGAGGAATGTGCATCTCTGGCTGGAT +
Preference number: 3 (lower is better)
Translates to: LAHSKITFGTVG*DWPRNVHLWLD
Trigger: ATCCAGCCAGAGATGCACATTCCTCGGCCAGTCTCAGCCAACAGTACCAAAAGTGATTTTTGAGTGTGCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
3UTR CCA 72 bp TACCCTGGCACACTCAAAAATCACTTTTGGTACTGTTaGCTGAGACTGGCCGAGGAATGTGCATCTCTGGCT +
Preference number: 3 (lower is better)
Translates to: YPGTLKNHFWYC*LRLAEECASLA
Trigger: AGCCAGAGATGCACATTCCTCGGCCAGTCTCAGCCAACAGTACCAAAAGTGATTTTTGAGTGTGCCAGGGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
3UTR TCA 72 bp GAGGGTTACCCAATGGTCTCCTTCCCATTCTTTATATaGGGTAAATGCAAACCAGGGAGCCACCGAATAAAC +
Preference number: 3 (lower is better)
Translates to: EGYPMVSFPFFI*GKCKPGSHRIN
Trigger: GTTTATTCGGTGGCTCCCTGGTTTGCATTTACCTCATATAAAGAATGGGAAGGAGACCATTGGGTAACCCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
3UTR-3UTR CAA 90 bp CTACACAGCTTAGAACAATGGTTGGAGCTTCATTCTTTGAGCAGAAAGACTCAATCACTTGTAGCACCATaGGATGTGGGTGCACACTTG +
Preference number: 3 (lower is better)
Translates to: LHSLEQWLELHSLSRKTQSLVAP*DVGAHL
Trigger: CAAGTGTGCACCCACATCCAATGGTGCTACAAGTGA...TTGAGTCTTTCTGCTCAAAGAATGAAGCTCCAACCATTGTTCTAAGCTGTGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
3UTR-3UTR CAA 90 bp GAACAGGAAGCTAAGAAATTAAAGATGGCGAGATTGTCTAAAATAACTGAGGCTTCACTTTTGGTACTGTaGGCTGAGACTGGCCGAGGA +
Preference number: 3 (lower is better)
Translates to: EQEAKKLKMARLSKITEASLLVL*AETGRG
Trigger: TCCTCGGCCAGTCTCAGCCAACAGTACCAAAAGTGA...AGCCTCAGTTATTTTAGACAATCTCGCCATCTTTAATTTCTTAGCTTCCTGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
3UTR TCA 72 bp CAACAATCCTGCCCATCTTTTCTCGGAAGACAAACTTaGACTTGTCGCTGGTTTTCATTGTCAAGTCACTGT +
Preference number: 3 (lower is better)
Translates to: QQSCPSFLGRQT*TCRWFSLSSHC
Trigger: ACAGTGACTTGACAATGAAAACCAGCGACAAGTTCAAGTTTGTCTTCCGAGAAAAGATGGGCAGGATTGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519385.5
3UTR-3UTR CAA 90 bp GCTTCATTCTTTGAGCAGAAAGACTCAAATATTATTTCAGTCACTTGTAGCACCTCACTTGTAGCACCATaGGATGTGGGTGCACACTTG +
Preference number: 3 (lower is better)
Translates to: ASFFEQKDSNIISVTCSTSLVAP*DVGAHL
Trigger: CAAGTGTGCACCCACATCCAATGGTGCTACAAGTGA...GGTGCTACAAGTGACTGAAATAATATTTGAGTCTTTCTGCTCAAAGAATGAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
3UTR-3UTR CAA 90 bp TTTCACCTCTTTTCACCAGCACTCCCACCCATTCCCGTTAGAAATATTTTGTTAAGTACATTTGTAATCTaGGGCTCCATGGGAATGTCC +
Preference number: 3 (lower is better)
Translates to: FHLFSPALPPIPVRNILLSTFVI*GSMGMS
Trigger: GGACATTCCCATGGAGCCCAAGATTACAAATGTACT...TAACAAAATATTTCTAACGGGAATGGGTGGGAGTGCTGGTGAAAAGAGGTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
3UTR-3UTR CAA 90 bp AAATGGACTCAATTCTGCAAGCCTTCATGGCAACAGCCCATATTAAGACTTCTAAGTACATTTGTAATCTaGGGCTCCATGGGAATGTCC +
Preference number: 3 (lower is better)
Translates to: KWTQFCKPSWQQPILRLLSTFVI*GSMGMS
Trigger: GGACATTCCCATGGAGCCCAAGATTACAAATGTACT...TAGAAGTCTTAATATGGGCTGTTGCCATGAAGGCTTGCAGAATTGAGTCCATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
3UTR-3UTR CAA 90 bp CAGAAAGACTCAAATATTATTTCAGTCACTTGTAGCACCATTGGATGTGGGTGCTCTCGGAAGACAAACTaGAACTTGTCGCTGGTTTTC +
Preference number: 3 (lower is better)
Translates to: QKDSNIISVTCSTIGCGCSRKTN*NLSLVF
Trigger: GAAAACCAGCGACAAGTTCAAGTTTGTCTTCCGAGA...GCACCCACATCCAATGGTGCTACAAGTGACTGAAATAATATTTGAGTCTTTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519385.5
3UTR CCA 72 bp GCAGCTAGAAAATGGACTCAATTCTGCAAGCCTTCATaGCAACAGCCCATATTAAGACTTCTAGAACAAGTT +
Preference number: 3 (lower is better)
Translates to: AARKWTQFCKPS*QQPILRLLEQV
Trigger: AACTTGTTCTAGAAGTCTTAATATGGGCTGTTGCCATGAAGGCTTGCAGAATTGAGTCCATTTTCTAGCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
3UTR-3UTR CAA 90 bp GAACAGGAAGCTAAGAAATTAAAGATGGCGAGATTGTCTAAAATAACTGAGGCTCTTAAGCTAAGCCACTaGTTCCTGGGTCAAGCAGTT +
Preference number: 3 (lower is better)
Translates to: EQEAKKLKMARLSKITEALKLSH*FLGQAV
Trigger: AACTGCTTGACCCAGGAACAAGTGGCTTAGCTTAAG...AGCCTCAGTTATTTTAGACAATCTCGCCATCTTTAATTTCTTAGCTTCCTGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
3UTR-3UTR CAA 90 bp TGCACACTTGGCCTAAAATACCATTTACATCATTATCTTGTCCTGTTGAAGACCCATTATCTTGTCCTGTaGAAGACCTATGGCATGCAA +
Preference number: 3 (lower is better)
Translates to: CTLGLKYHLHHYLVLLKTHYLVL*KTYGMQ
Trigger: TTGCATGCCATAGGTCTTCAACAGGACAAGATAATG...GGTCTTCAACAGGACAAGATAATGATGTAAATGGTATTTTAGGCCAAGTGTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
3UTR-3UTR CAA 90 bp CATTGGATGTGGGTGCACACTTGGCCTAAAATACCATTTACATCATTATCTTGTAGCTTAGAACAATGGTaGGAGCTTCATTCTTTGAGC +
Preference number: 3 (lower is better)
Translates to: HWMWVHTWPKIPFTSLSCSLEQW*ELHSLS
Trigger: GCTCAAAGAATGAAGCTCCAACCATTGTTCTAAGCT...ACAAGATAATGATGTAAATGGTATTTTAGGCCAAGTGTGCACCCACATCCAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
3UTR-3UTR CAA 90 bp ACCATTGGATGTGGGTGCACACTTGGCCTAAAATACCATTTACATCATTATCTTTGTCGCTGGTTTTCATaGTCAAGTCACTGTAGTCAA +
Preference number: 3 (lower is better)
Translates to: TIGCGCTLGLKYHLHHYLCRWFS*SSHCSQ
Trigger: TTGACTACAGTGACTTGACAATGAAAACCAGCGACA...AAGATAATGATGTAAATGGTATTTTAGGCCAAGTGTGCACCCACATCCAATGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519385.5
3UTR CCA 72 bp CCTATAATGCTAGGACTTCTACACAGCTTAGAACAATaGTTGGAGCTTCATTCTTTGAGCAGAAAGACTCAA +
Preference number: 3 (lower is better)
Translates to: PIMLGLLHSLEQ*LELHSLSRKTQ
Trigger: TTGAGTCTTTCTGCTCAAAGAATGAAGCTCCAACCATTGTTCTAAGCTGTGTAGAAGTCCTAGCATTATAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
3UTR-3UTR CAA 90 bp TATAATGCTAGGACTTCTACACAGCTTAGAACAATGGTTGGAGCTTCATTCTTTAGCTTAGAACAATGGTaGGAGCTTCATTCTTTGAGC +
Preference number: 3 (lower is better)
Translates to: YNARTSTQLRTMVGASFFSLEQW*ELHSLS
Trigger: GCTCAAAGAATGAAGCTCCAACCATTGTTCTAAGCT...AAAGAATGAAGCTCCAACCATTGTTCTAAGCTGTGTAGAAGTCCTAGCATTATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
3UTR-3UTR CAA 90 bp GAACAGGAAGCTAAGAAATTAAAGATGGCGAGATTGTCTAAAATAACTGAGGCTACTCAAAAATCACTTTaGGTACTGTTGGCTGAGACT +
Preference number: 3 (lower is better)
Translates to: EQEAKKLKMARLSKITEATQKSL*VLLAET
Trigger: AGTCTCAGCCAACAGTACCAAAAGTGATTTTTGAGT...AGCCTCAGTTATTTTAGACAATCTCGCCATCTTTAATTTCTTAGCTTCCTGTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
3UTR TCA 72 bp ACATGTATAGTTACTTTAGAAACAACTTCTGACACTTaGGGGTTACCCAATGGTCTCCTTCCCATTCTTTAT +
Preference number: 3 (lower is better)
Translates to: TCIVTLETTSDT*GLPNGLLPILY
Trigger: ATAAAGAATGGGAAGGAGACCATTGGGTAACCCTCAAGTGTCAGAAGTTGTTTCTAAAGTAACTATACATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
3UTR GCA 72 bp ATTATTTCAGTCACTTGTAGCACCATTGGATGTGGGTaGACACTTGGCCTAAAATACCATTTACATCATTAT +
Preference number: 3 (lower is better)
Translates to: IISVTCSTIGCG*TLGLKYHLHHY
Trigger: ATAATGATGTAAATGGTATTTTAGGCCAAGTGTGCACCCACATCCAATGGTGCTACAAGTGACTGAAATAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
3UTR CCA 72 bp TCCATGGGAATGTCCTTGATTAAGATGAAAGAGGAATaGACTGATGTTTCTATTACAAGATCCTATAATGCT +
Preference number: 3 (lower is better)
Translates to: SMGMSLIKMKEE*TDVSITRSYNA
Trigger: AGCATTATAGGATCTTGTAATAGAAACATCAGTCCATTCCTCTTTCATCTTAATCAAGGACATTCCCATGGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR GCA 90 bp TTAGAGCAAAGGGATGAATGCTCCTCTTGGAATGATACAGGGGATCTGCCACTGTTGGAGGCTTGGCCTTaGACCCTGAGGGAGCTGGGA +
Preference number: 4 (lower is better)
Translates to: LEQRDECSSWNDTGDLPLLEAWP*TLRELG
Trigger: TCCCAGCTCCCTCAGGGTGCAAGGCCAAGCCTCCAA...CAGTGGCAGATCCCCTGTATCATTCCAAGAGGAGCATTCATCCCTTTGCTCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518525.5
CDS-3UTR GCA 90 bp TTAGAGCAAAGGGATGAATGCTCCTCTTGGAATGATACAGGGGATCTGCCACTGGGGCATACAGGACCGTaGCATTGGAGAAGAGGCGGA +
Preference number: 4 (lower is better)
Translates to: LEQRDECSSWNDTGDLPLGHTGP*HWRRGG
Trigger: TCCGCCTCTTCTCCAATGGCACGGTCCTGTATGCCC...CAGTGGCAGATCCCCTGTATCATTCCAAGAGGAGCATTCATCCCTTTGCTCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR TCA 90 bp TGTGGGTGCACACTTGGCCTAAAATACCATTTACATCATTATCTTGTCCTGTTGGGGCAGAGAGAGAGCTaGGGCTGTGGTACGAGGCCC +
Preference number: 4 (lower is better)
Translates to: CGCTLGLKYHLHHYLVLLGQRES*GCGTRP
Trigger: GGGCCTCGTACCACAGCCTCAGCTCTCTCTCTGCCC...CAACAGGACAAGATAATGATGTAAATGGTATTTTAGGCCAAGTGTGCACCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518525.5
CDS-3UTR TCA 90 bp TGTGGGTGCACACTTGGCCTAAAATACCATTTACATCATTATCTTGTCCTGTTGCTTGGCCTTGCACCCTaGGGGAGCTGGGAGCCAGGA +
Preference number: 4 (lower is better)
Translates to: CGCTLGLKYHLHHYLVLLLGLAP*GSWEPG
Trigger: TCCTGGCTCCCAGCTCCCTCAGGGTGCAAGGCCAAG...CAACAGGACAAGATAATGATGTAAATGGTATTTTAGGCCAAGTGTGCACCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518525.5
CDS-3UTR CCA 90 bp GCTAGGACTTCTACACAGCTTAGAACAATGGTTGGAGCTTCATTCTTTGAGCAGTCAAACACCAGCCGCTaGTCCATCCAGCGCTGTCGG +
Preference number: 4 (lower is better)
Translates to: ARTSTQLRTMVGASFFEQSNTSR*SIQRCR
Trigger: CCGACAGCGCTGGATGGACCAGCGGCTGGTGTTTGA...CTGCTCAAAGAATGAAGCTCCAACCATTGTTCTAAGCTGTGTAGAAGTCCTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
CDS-3UTR CCA 90 bp ATACAACCACATTTCACCTCTTTTCACCAGCACTCCCACCCATTCCCGTTAGAAGATTCCTTGGAGGCTTaGCCTTGCACCCTGAGGGAG +
Preference number: 4 (lower is better)
Translates to: IQPHFTSFHQHSHPFPLEDSLEA*PCTLRE
Trigger: CTCCCTCAGGGTGCAAGGCCAAGCCTCCAAGGAATC...TTCTAACGGGAATGGGTGGGAGTGCTGGTGAAAAGAGGTGAAATGTGGTTGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518525.5
3UTR CAA 72 bp TTACCCTGGCACACTCAAAAATCACTTTTGGTACTGTaGGCTGAGACTGGCCGAGGAATGTGCATCTCTGGC +
Preference number: 4 (lower is better)
Translates to: LPWHTQKSLLVL*AETGRGMCISG
Trigger: GCCAGAGATGCACATTCCTCGGCCAGTCTCAGCCAACAGTACCAAAAGTGATTTTTGAGTGTGCCAGGGTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
3UTR CAA 72 bp TGGAAGCCTTTACCCTGGCACACTCAAAAATCACTTTaGGTACTGTTGGCTGAGACTGGCCGAGGAATGTGC +
Preference number: 4 (lower is better)
Translates to: WKPLPWHTQKSL*VLLAETGRGMC
Trigger: GCACATTCCTCGGCCAGTCTCAGCCAACAGTACCAAAAGTGATTTTTGAGTGTGCCAGGGTAAAGGCTTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR TCA 90 bp GCTAGGACTTCTACACAGCTTAGAACAATGGTTGGAGCTTCATTCTTTGAGCAGACCTCGACGTTGAACTaGCTCCCCTGGATGCACATC +
Preference number: 4 (lower is better)
Translates to: ARTSTQLRTMVGASFFEQTSTLN*LPWMHI
Trigger: GATGTGCATCCAGGGGAGTCAGTTCAACGTCGAGGT...CTGCTCAAAGAATGAAGCTCCAACCATTGTTCTAAGCTGTGTAGAAGTCCTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
CDS-3UTR TCA 90 bp ACGTTGTCGCTGGAAATTTCAATGCTGGCAAAGCTGATCTTCCGTTTAAAGCTGACCTCGACGTTGAACTaGCTCCCCTGGATGCACATC +
Preference number: 4 (lower is better)
Translates to: TLSLEISMLAKLIFRLKLTSTLN*LPWMHI
Trigger: GATGTGCATCCAGGGGAGTCAGTTCAACGTCGAGGT...CAGCTTTAAACGGAAGATCAGCTTTGCCAGCATTGAAATTTCCAGCGACAACGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519385.5
CDS-3UTR CCA 90 bp CTACACAGCTTAGAACAATGGTTGGAGCTTCATTCTTTGAGCAGAAAGACTCAACTGTCCCCTCGTATGTaGACACGCAGCCACCCTCAG +
Preference number: 4 (lower is better)
Translates to: LHSLEQWLELHSLSRKTQLSPRM*TRSHPQ
Trigger: CTGAGGGTGGCTGCGTGTCCACATACGAGGGGACAG...TTGAGTCTTTCTGCTCAAAGAATGAAGCTCCAACCATTGTTCTAAGCTGTGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
CDS-3UTR CCA 90 bp TCTACACAGCTTAGAACAATGGTTGGAGCTTCATTCTTTGAGCAGAAAGACTCACAAGGCACGGTCTTCTaGGTCCCCAGGGTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: STQLRTMVGASFFEQKDSQGTVF*VPRVLL
Trigger: GAGGAGAACCCTGGGGACCCAGAAGACCGTGCCTTG...TGAGTCTTTCTGCTCAAAGAATGAAGCTCCAACCATTGTTCTAAGCTGTGTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
CDS-3UTR CCA 90 bp GGTTTTCATTGTCAAGTCACTGTAGTCAACGTTGTCGCTGGAAATTTCAATGCTTCAAACACCAGCCGCTaGTCCATCCAGCGCTGTCGG +
Preference number: 4 (lower is better)
Translates to: GFHCQVTVVNVVAGNFNASNTSR*SIQRCR
Trigger: CCGACAGCGCTGGATGGACCAGCGGCTGGTGTTTGA...AGCATTGAAATTTCCAGCGACAACGTTGACTACAGTGACTTGACAATGAAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519385.5
CDS-3UTR CCA 90 bp TTAGAGCAAAGGGATGAATGCTCCTCTTGGAATGATACAGGGGATCTGCCACTGCCCACAGTGACTTCATaGAGGAAGGACTTCTTGGAC +
Preference number: 4 (lower is better)
Translates to: LEQRDECSSWNDTGDLPLPTVTS*RKDFLD
Trigger: GTCCAAGAAGTCCTTCCTCCATGAAGTCACTGTGGG...CAGTGGCAGATCCCCTGTATCATTCCAAGAGGAGCATTCATCCCTTTGCTCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR TCA 90 bp TGGTTTATTTCTGACAGGAAAGGTAAAGCCGTGCATTTATTAGAACAGGAAGCTTGCCGACCTCGACGTTaGACTGACTCCCCTGGATGC +
Preference number: 4 (lower is better)
Translates to: WFISDRKGKAVHLLEQEACRPRR*TDSPGC
Trigger: GCATCCAGGGGAGTCAGTTCAACGTCGAGGTCGGCA...AGCTTCCTGTTCTAATAAATGCACGGCTTTACCTTTCCTGTCAGAAATAAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR GCA 90 bp ACCACATTTCACCTCTTTTCACCAGCACTCCCACCCATTCCCGTTAGAAATATTTGTTGGGAAGAGAAGTaGGGGACCCGATCATCAGTG +
Preference number: 4 (lower is better)
Translates to: TTFHLFSPALPPIPVRNICWEEK*GTRSSV
Trigger: CACTGATGATCGGGTCCCGCACTTCTCTTCCCAACA...AATATTTCTAACGGGAATGGGTGGGAGTGCTGGTGAAAAGAGGTGAAATGTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR CCA 90 bp CCACATTTCACCTCTTTTCACCAGCACTCCCACCCATTCCCGTTAGAAATATTTATGTGCATCTCTGGCTaGATTTGGAGAGGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: PHFTSFHQHSHPFPLEIFMCISG*IWRGQL
Trigger: GAGCTGCCCTCTCCAAATCCAGCCAGAGATGCACAT...AAATATTTCTAACGGGAATGGGTGGGAGTGCTGGTGAAAAGAGGTGAAATGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR TCA 90 bp TCAACAATCCTGCCCATCTTTTCTCGGAAGACAAACTTGAACTTGTCGCTGGTTTCACCAGGTAGTTGTTaGGGCTCTGTTAGGGCAAGT +
Preference number: 4 (lower is better)
Translates to: STILPIFSRKTNLNLSLVSPGSC*GSVRAS
Trigger: ACTTGCCCTAACAGAGCCTCAACAACTACCTGGTGA...AACCAGCGACAAGTTCAAGTTTGTCTTCCGAGAAAAGATGGGCAGGATTGTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519385.5
CDS-3UTR TCA 90 bp TTGGGCTCCATGGGAATGTCCTTGATTAAGATGAAAGAGGAATGGACTGATGTTCTCACACCAAGGGGCTaGAGTAGGAATCACCAGGTA +
Preference number: 4 (lower is better)
Translates to: LGSMGMSLIKMKEEWTDVLTPRG*SRNHQV
Trigger: TACCTGGTGATTCCTACTTCAGCCCCTTGGTGTGAG...AACATCAGTCCATTCCTCTTTCATCTTAATCAAGGACATTCCCATGGAGCCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR TCA 90 bp AATGGACTGATGTTTCTATTACAAGATCCTATAATGCTAGGACTTCTACACAGCTGCCGACCTCGACGTTaGACTGACTCCCCTGGATGC +
Preference number: 4 (lower is better)
Translates to: NGLMFLLQDPIMLGLLHSCRPRR*TDSPGC
Trigger: GCATCCAGGGGAGTCAGTTCAACGTCGAGGTCGGCA...GCTGTGTAGAAGTCCTAGCATTATAGGATCTTGTAATAGAAACATCAGTCCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
CDS-3UTR TCA 90 bp CAGAAAGACTCAAATATTATTTCAGTCACTTGTAGCACCATTGGATGTGGGTGCGGCGGGCATCCAGAGTaGAGCTCTTGTTGCCTTCAA +
Preference number: 4 (lower is better)
Translates to: QKDSNIISVTCSTIGCGCGGHPE*SSCCLQ
Trigger: TTGAAGGCAACAAGAGCTTCACTCTGGATGCCCGCC...GCACCCACATCCAATGGTGCTACAAGTGACTGAAATAATATTTGAGTCTTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
CDS-3UTR TCA 90 bp TTAGAGCAAAGGGATGAATGCTCCTCTTGGAATGATACAGGGGATCTGCCACTGGAAGGATCAGGGATCTaGGCAAAGCCAAGTTTACTT +
Preference number: 4 (lower is better)
Translates to: LEQRDECSSWNDTGDLPLEGSGI*AKPSLL
Trigger: AAGTAAACTTGGCTTTGCTCAGATCCCTGATCCTTC...CAGTGGCAGATCCCCTGTATCATTCCAAGAGGAGCATTCATCCCTTTGCTCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR GCA 90 bp GTTTCTATTACAAGATCCTATAATGCTAGGACTTCTACACAGCTTAGAACAATGGGGCCAGCACGCTCCTaGTCATGCGGGATAAGCCAC +
Preference number: 4 (lower is better)
Translates to: VSITRSYNARTSTQLRTMGPARS*SCGISH
Trigger: GTGGCTTATCCCGCATGAGCAGGAGCGTGCTGGCCC...CATTGTTCTAAGCTGTGTAGAAGTCCTAGCATTATAGGATCTTGTAATAGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR CCA 90 bp AATGGACTGATGTTTCTATTACAAGATCCTATAATGCTAGGACTTCTACACAGCCTGTCCCCTCGTATGTaGACACGCAGCCACCCTCAG +
Preference number: 4 (lower is better)
Translates to: NGLMFLLQDPIMLGLLHSLSPRM*TRSHPQ
Trigger: CTGAGGGTGGCTGCGTGTCCACATACGAGGGGACAG...GCTGTGTAGAAGTCCTAGCATTATAGGATCTTGTAATAGAAACATCAGTCCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
CDS-3UTR CCA 90 bp GAATGGACTGATGTTTCTATTACAAGATCCTATAATGCTAGGACTTCTACACAGCTGTCCCCTCGTATGTaGACACGCAGCCACCCTCAG +
Preference number: 4 (lower is better)
Translates to: EWTDVSITRSYNARTSTQLSPRM*TRSHPQ
Trigger: CTGAGGGTGGCTGCGTGTCCACATACGAGGGGACAG...CTGTGTAGAAGTCCTAGCATTATAGGATCTTGTAATAGAAACATCAGTCCATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
CDS-3UTR CCA 90 bp GCTTCATTCTTTGAGCAGAAAGACTCAAATATTATTTCAGTCACTTGTAGCACCCAAGGCACGGTCTTCTaGGTCCCCAGGGTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: ASFFEQKDSNIISVTCSTQGTVF*VPRVLL
Trigger: GAGGAGAACCCTGGGGACCCAGAAGACCGTGCCTTG...GGTGCTACAAGTGACTGAAATAATATTTGAGTCTTTCTGCTCAAAGAATGAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
CDS-3UTR CCA 90 bp GCTGGAAATTTCAATGCTGGCAAAGCTGATCTTCCGTTTAAAGCTGGAGATGGAGCTGTCGGAGGTATATaGTGGCTGTGTAGTCCATGT +
Preference number: 4 (lower is better)
Translates to: AGNFNAGKADLPFKAGDGAVGGI*WLCSPC
Trigger: ACATGGACTACACAGCCACCATATACCTCCGACAGC...TCCATCTCCAGCTTTAAACGGAAGATCAGCTTTGCCAGCATTGAAATTTCCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519385.5
CDS-3UTR CCA 90 bp GAACAGGAAGCTAAGAAATTAAAGATGGCGAGATTGTCTAAAATAACTGAGGCTTCAAACACCAGCCGCTaGTCCATCCAGCGCTGTCGG +
Preference number: 4 (lower is better)
Translates to: EQEAKKLKMARLSKITEASNTSR*SIQRCR
Trigger: CCGACAGCGCTGGATGGACCAGCGGCTGGTGTTTGA...AGCCTCAGTTATTTTAGACAATCTCGCCATCTTTAATTTCTTAGCTTCCTGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR CCA 90 bp AATGCTGGCAAAGCTGATCTTCCGTTTAAAGCTGGAGATGGAGCTGTTGATGATCCCACAGTGACTTCATaGAGGAAGGACTTCTTGGAC +
Preference number: 4 (lower is better)
Translates to: NAGKADLPFKAGDGAVDDPTVTS*RKDFLD
Trigger: GTCCAAGAAGTCCTTCCTCCATGAAGTCACTGTGGG...ATCATCAACAGCTCCATCTCCAGCTTTAAACGGAAGATCAGCTTTGCCAGCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519385.5
CDS-3UTR CCA 90 bp ATACAACCACATTTCACCTCTTTTCACCAGCACTCCCACCCATTCCCGTTAGAAACACCACCAGGAAAGTaGAAGGAACGTAGGTTTCCA +
Preference number: 4 (lower is better)
Translates to: IQPHFTSFHQHSHPFPLETPPGK*KERRFP
Trigger: TGGAAACCTACGTTCCTTCCACTTTCCTGGTGGTGT...TTCTAACGGGAATGGGTGGGAGTGCTGGTGAAAAGAGGTGAAATGTGGTTGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR CCA 90 bp ATACAACCACATTTCACCTCTTTTCACCAGCACTCCCACCCATTCCCGTTAGAAACCCGATCATCAGTGTaGTCATTGATAACACGGTCG +
Preference number: 4 (lower is better)
Translates to: IQPHFTSFHQHSHPFPLETRSSV*SLITRS
Trigger: CGACCGTGTTATCAATGACCACACTGATGATCGGGT...TTCTAACGGGAATGGGTGGGAGTGCTGGTGAAAAGAGGTGAAATGTGGTTGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR CCA 90 bp TCTACACAGCTTAGAACAATGGTTGGAGCTTCATTCTTTGAGCAGAAAGACTCACACCCTCAGATGGAGTaGCTCTCTGGGGAAGAATGG +
Preference number: 4 (lower is better)
Translates to: STQLRTMVGASFFEQKDSHPQME*LSGEEW
Trigger: CCATTCTTCCCCAGAGAGCCACTCCATCTGAGGGTG...TGAGTCTTTCTGCTCAAAGAATGAAGCTCCAACCATTGTTCTAAGCTGTGTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518525.5
CDS-3UTR CCA 90 bp TGGCCTAAAATACCATTTACATCATTATCTTGTCCTGTTGAAGACCTATGGCATGCAGCCACCCTCAGATaGAGTGGCTCTCTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: WPKIPFTSLSCPVEDLWHAATLR*SGSLGK
Trigger: CTTCCCCAGAGAGCCACTCCATCTGAGGGTGGCTGC...ATGCCATAGGTCTTCAACAGGACAAGATAATGATGTAAATGGTATTTTAGGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518525.5
CDS-3UTR TCA 90 bp AAATACCATTTACATCATTATCTTGTCCTGTTGAAGACCTATGGCATGCAAGAATGCCGACCTCGACGTTaGACTGACTCCCCTGGATGC +
Preference number: 4 (lower is better)
Translates to: KYHLHHYLVLLKTYGMQECRPRR*TDSPGC
Trigger: GCATCCAGGGGAGTCAGTTCAACGTCGAGGTCGGCA...TTCTTGCATGCCATAGGTCTTCAACAGGACAAGATAATGATGTAAATGGTATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
CDS-3UTR TCA 90 bp TTAGAGCAAAGGGATGAATGCTCCTCTTGGAATGATACAGGGGATCTGCCACTGGTCCATGTTACTCTCTaGAATGCTAGAGATACTTGC +
Preference number: 4 (lower is better)
Translates to: LEQRDECSSWNDTGDLPLVHVTL*NARDTC
Trigger: GCAAGTATCTCTAGCATTTCAGAGAGTAACATGGAC...CAGTGGCAGATCCCCTGTATCATTCCAAGAGGAGCATTCATCCCTTTGCTCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR TCA 90 bp CTTCCAGTATGGGGAATCCATTGTATCTTAGAACCGAGGGATTTGTTTAGATTGGCCTGTTTCCCACAGTaGCTTCATGGAGGAAGGACT +
Preference number: 4 (lower is better)
Translates to: LPVWGIHCILEPRDLFRLACFPQ*LHGGRT
Trigger: AGTCCTTCCTCCATGAAGTCACTGTGGGAAACAGGC...CAATCTAAACAAATCCCTCGGTTCTAAGATACAATGGATTCCCCATACTGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR TCA 90 bp CCACATTTCACCTCTTTTCACCAGCACTCCCACCCATTCCCGTTAGAAATATTTACAACTTCTGACACTTaGGGGTTACCCAATGGTCTC +
Preference number: 4 (lower is better)
Translates to: PHFTSFHQHSHPFPLEIFTTSDT*GLPNGL
Trigger: GAGACCATTGGGTAACCCTCAAGTGTCAGAAGTTGT...AAATATTTCTAACGGGAATGGGTGGGAGTGCTGGTGAAAAGAGGTGAAATGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR GCA 90 bp ACCACATTTCACCTCTTTTCACCAGCACTCCCACCCATTCCCGTTAGAAATATTTTCATGTTGAGAAGCTaGTCACACCAAGGGGCTGAA +
Preference number: 4 (lower is better)
Translates to: TTFHLFSPALPPIPVRNIFMLRS*SHQGAE
Trigger: TTCAGCCCCTTGGTGTGAGCAGCTTCTCAACATGAA...AATATTTCTAACGGGAATGGGTGGGAGTGCTGGTGAAAAGAGGTGAAATGTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR GCA 90 bp CAGCTCACCCGCAACCTGAACATAGGTTCTGTAACGTATCTCATTGTTACTCAGAATGCTAGAGATACTTaGAATGTCCAGAGTCAGCGC +
Preference number: 4 (lower is better)
Translates to: QLTRNLNIGSVTYLIVTQNARDT*NVQSQR
Trigger: GCGCTGACTCTGGACATTGCAAGTATCTCTAGCATT...CTGAGTAACAATGAGATACGTTACAGAACCTATGTTCAGGTTGCGGGTGAGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR GCA 90 bp GCTTCATTCTTTGAGCAGAAAGACTCAAATATTATTTCAGTCACTTGTAGCACCGGGCATACAGGACCGTaGCATTGGAGAAGAGGCGGA +
Preference number: 4 (lower is better)
Translates to: ASFFEQKDSNIISVTCSTGHTGP*HWRRGG
Trigger: TCCGCCTCTTCTCCAATGGCACGGTCCTGTATGCCC...GGTGCTACAAGTGACTGAAATAATATTTGAGTCTTTCTGCTCAAAGAATGAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
CDS-3UTR CCA 90 bp GCTAGGACTTCTACACAGCTTAGAACAATGGTTGGAGCTTCATTCTTTGAGCAGGTCGGAGGTATATGGTaGCTGTGTAGTCCATGTTAC +
Preference number: 4 (lower is better)
Translates to: ARTSTQLRTMVGASFFEQVGGIW*LCSPCY
Trigger: GTAACATGGACTACACAGCCACCATATACCTCCGAC...CTGCTCAAAGAATGAAGCTCCAACCATTGTTCTAAGCTGTGTAGAAGTCCTAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
CDS-3UTR CCA 90 bp AAATGGACTCAATTCTGCAAGCCTTCATGGCAACAGCCCATATTAAGACTTCTAATGTGCATCTCTGGCTaGATTTGGAGAGGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: KWTQFCKPSWQQPILRLLMCISG*IWRGQL
Trigger: GAGCTGCCCTCTCCAAATCCAGCCAGAGATGCACAT...TAGAAGTCTTAATATGGGCTGTTGCCATGAAGGCTTGCAGAATTGAGTCCATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR CCA 90 bp CATTGGATGTGGGTGCACACTTGGCCTAAAATACCATTTACATCATTATCTTGTTCCCTCCTGACATCATaGCGAAGCTCCTGCCTAGAC +
Preference number: 4 (lower is better)
Translates to: HWMWVHTWPKIPFTSLSCSLLTS*RSSCLD
Trigger: GTCTAGGCAGGAGCTTCGCCATGATGTCAGGAGGGA...ACAAGATAATGATGTAAATGGTATTTTAGGCCAAGTGTGCACCCACATCCAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518525.5
CDS-3UTR CCA 90 bp AAATACCATTTACATCATTATCTTGTCCTGTTGAAGACCTATGGCATGCAAGAAAGGGGAGGGATTCCTTaGAGGCTTGGCCTTGCACCC +
Preference number: 4 (lower is better)
Translates to: KYHLHHYLVLLKTYGMQERGGIP*RLGLAP
Trigger: GGGTGCAAGGCCAAGCCTCCAAGGAATCCCTCCCCT...TTCTTGCATGCCATAGGTCTTCAACAGGACAAGATAATGATGTAAATGGTATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518525.5
CDS-3UTR TCA 90 bp CACCATTGGATGTGGGTGCACACTTGGCCTAAAATACCATTTACATCATTATCTTCACCAGGTAGTTGTTaGGGCTCTGTTAGGGCAAGT +
Preference number: 4 (lower is better)
Translates to: HHWMWVHTWPKIPFTSLSSPGSC*GSVRAS
Trigger: ACTTGCCCTAACAGAGCCTCAACAACTACCTGGTGA...AGATAATGATGTAAATGGTATTTTAGGCCAAGTGTGCACCCACATCCAATGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
CDS-3UTR TCA 90 bp AATGGACTGATGTTTCTATTACAAGATCCTATAATGCTAGGACTTCTACACAGCACCTCGACGTTGAACTaGCTCCCCTGGATGCACATC +
Preference number: 4 (lower is better)
Translates to: NGLMFLLQDPIMLGLLHSTSTLN*LPWMHI
Trigger: GATGTGCATCCAGGGGAGTCAGTTCAACGTCGAGGT...GCTGTGTAGAAGTCCTAGCATTATAGGATCTTGTAATAGAAACATCAGTCCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
CDS-3UTR TCA 90 bp TATAATGCTAGGACTTCTACACAGCTTAGAACAATGGTTGGAGCTTCATTCTTTGGCGGGCATCCAGAGTaGAGCTCTTGTTGCCTTCAA +
Preference number: 4 (lower is better)
Translates to: YNARTSTQLRTMVGASFFGGHPE*SSCCLQ
Trigger: TTGAAGGCAACAAGAGCTTCACTCTGGATGCCCGCC...AAAGAATGAAGCTCCAACCATTGTTCTAAGCTGTGTAGAAGTCCTAGCATTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
CDS-3UTR TCA 90 bp GAATGGACTGATGTTTCTATTACAAGATCCTATAATGCTAGGACTTCTACACAGGGCGGGCATCCAGAGTaGAGCTCTTGTTGCCTTCAA +
Preference number: 4 (lower is better)
Translates to: EWTDVSITRSYNARTSTQGGHPE*SSCCLQ
Trigger: TTGAAGGCAACAAGAGCTTCACTCTGGATGCCCGCC...CTGTGTAGAAGTCCTAGCATTATAGGATCTTGTAATAGAAACATCAGTCCATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
CDS-3UTR TCA 90 bp CAGAAAGACTCAAATATTATTTCAGTCACTTGTAGCACCATTGGATGTGGGTGCATGCTCCTCTTGGAATaGTACAGGGGATCTGCCACT +
Preference number: 4 (lower is better)
Translates to: QKDSNIISVTCSTIGCGCMLLLE*YRGSAT
Trigger: AGTGGCAGATCCCCTGTATCATTCCAAGAGGAGCAT...GCACCCACATCCAATGGTGCTACAAGTGACTGAAATAATATTTGAGTCTTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR GCA 90 bp AAGATGAAAGAGGAATGGACTGATGTTTCTATTACAAGATCCTATAATGCTAGGGGGCATACAGGACCGTaGCATTGGAGAAGAGGCGGA +
Preference number: 4 (lower is better)
Translates to: KMKEEWTDVSITRSYNARGHTGP*HWRRGG
Trigger: TCCGCCTCTTCTCCAATGGCACGGTCCTGTATGCCC...CCTAGCATTATAGGATCTTGTAATAGAAACATCAGTCCATTCCTCTTTCATCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
CDS-3UTR GCA 90 bp CATTGGATGTGGGTGCACACTTGGCCTAAAATACCATTTACATCATTATCTTGTCCCCAGCTTTCCAGCTaGAACTTGCATGTCTGTGTG +
Preference number: 4 (lower is better)
Translates to: HWMWVHTWPKIPFTSLSCPQLSS*NLHVCV
Trigger: CACACAGACATGCAAGTTGCAGCTGGAAAGCTGGGG...ACAAGATAATGATGTAAATGGTATTTTAGGCCAAGTGTGCACCCACATCCAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
CDS-3UTR GCA 90 bp GCTTCATTCTTTGAGCAGAAAGACTCAAATATTATTTCAGTCACTTGTAGCACCCGGTCGTCACTCCAATaGAGGTTCTTGCAGGGACTG +
Preference number: 4 (lower is better)
Translates to: ASFFEQKDSNIISVTCSTRSSLQ*RFLQGL
Trigger: CAGTCCCTGCAAGAACCTGCATTGGAGTGACGACCG...GGTGCTACAAGTGACTGAAATAATATTTGAGTCTTTCTGCTCAAAGAATGAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR GCA 90 bp TGGTTTATTTCTGACAGGAAAGGTAAAGCCGTGCATTTATTAGAACAGGAAGCTTGTTGGGAAGAGAAGTaGGGGACCCGATCATCAGTG +
Preference number: 4 (lower is better)
Translates to: WFISDRKGKAVHLLEQEACWEEK*GTRSSV
Trigger: CACTGATGATCGGGTCCCGCACTTCTCTTCCCAACA...AGCTTCCTGTTCTAATAAATGCACGGCTTTACCTTTCCTGTCAGAAATAAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR CCA 90 bp ACTTCTACACAGCTTAGAACAATGGTTGGAGCTTCATTCTTTGAGCAGAAAGACGCTGTCGGAGGTATATaGTGGCTGTGTAGTCCATGT +
Preference number: 4 (lower is better)
Translates to: TSTQLRTMVGASFFEQKDAVGGI*WLCSPC
Trigger: ACATGGACTACACAGCCACCATATACCTCCGACAGC...GTCTTTCTGCTCAAAGAATGAAGCTCCAACCATTGTTCTAAGCTGTGTAGAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
CDS-3UTR CCA 90 bp CAGAAAGACTCAAATATTATTTCAGTCACTTGTAGCACCATTGGATGTGGGTGCTTGTCCCCCTATCTTTaGCTGCCATCTGCTGTAAGG +
Preference number: 4 (lower is better)
Translates to: QKDSNIISVTCSTIGCGCLSPYL*LPSAVR
Trigger: CCTTACAGCAGATGGCAGCCAAAGATAGGGGGACAA...GCACCCACATCCAATGGTGCTACAAGTGACTGAAATAATATTTGAGTCTTTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR CCA 90 bp CAGCTCACCCGCAACCTGAACATAGGTTCTGTAACGTATCTCATTGTTACTCAGAGTCAACGTTGTCGCTaGAAATTTCAATGCTGGCAA +
Preference number: 4 (lower is better)
Translates to: QLTRNLNIGSVTYLIVTQSQRCR*KFQCWQ
Trigger: TTGCCAGCATTGAAATTTCCAGCGACAACGTTGACT...CTGAGTAACAATGAGATACGTTACAGAACCTATGTTCAGGTTGCGGGTGAGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR CCA 90 bp GAATGGACTGATGTTTCTATTACAAGATCCTATAATGCTAGGACTTCTACACAGCAGGGGATCTGCCACTaGGAGAGTGTTGCTCAGTGT +
Preference number: 4 (lower is better)
Translates to: EWTDVSITRSYNARTSTQQGICH*ESVAQC
Trigger: ACACTGAGCAACACTCTCCCAGTGGCAGATCCCCTG...CTGTGTAGAAGTCCTAGCATTATAGGATCTTGTAATAGAAACATCAGTCCATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR TCA 90 bp CATTGGATGTGGGTGCACACTTGGCCTAAAATACCATTTACATCATTATCTTGTTCACCAGGTAGTTGTTaGGGCTCTGTTAGGGCAAGT +
Preference number: 4 (lower is better)
Translates to: HWMWVHTWPKIPFTSLSCSPGSC*GSVRAS
Trigger: ACTTGCCCTAACAGAGCCTCAACAACTACCTGGTGA...ACAAGATAATGATGTAAATGGTATTTTAGGCCAAGTGTGCACCCACATCCAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
CDS-3UTR TCA 90 bp CTTCCAGTATGGGGAATCCATTGTATCTTAGAACCGAGGGATTTGTTTAGATTGTGTTATATCCTGCTGTaGGGTTCTCAAAGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: LPVWGIHCILEPRDLFRLCYILL*GSQSQA
Trigger: TGCCTGGCTTTGAGAACCTCACAGCAGGATATAACA...CAATCTAAACAAATCCCTCGGTTCTAAGATACAATGGATTCCCCATACTGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR TCA 90 bp TGTGGGTGCACACTTGGCCTAAAATACCATTTACATCATTATCTTGTCCTGTTGTGTTATATCCTGCTGTaGGGTTCTCAAAGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: CGCTLGLKYHLHHYLVLLCYILL*GSQSQA
Trigger: TGCCTGGCTTTGAGAACCTCACAGCAGGATATAACA...CAACAGGACAAGATAATGATGTAAATGGTATTTTAGGCCAAGTGTGCACCCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
CDS-3UTR TCA 90 bp ACCACATTTCACCTCTTTTCACCAGCACTCCCACCCATTCCCGTTAGAAATATTGTCCATGTTACTCTCTaGAATGCTAGAGATACTTGC +
Preference number: 4 (lower is better)
Translates to: TTFHLFSPALPPIPVRNIVHVTL*NARDTC
Trigger: GCAAGTATCTCTAGCATTTCAGAGAGTAACATGGAC...AATATTTCTAACGGGAATGGGTGGGAGTGCTGGTGAAAAGAGGTGAAATGTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR TCA 90 bp TATAATGCTAGGACTTCTACACAGCTTAGAACAATGGTTGGAGCTTCATTCTTTGCCTGTTTCCCACAGTaGCTTCATGGAGGAAGGACT +
Preference number: 4 (lower is better)
Translates to: YNARTSTQLRTMVGASFFACFPQ*LHGGRT
Trigger: AGTCCTTCCTCCATGAAGTCACTGTGGGAAACAGGC...AAAGAATGAAGCTCCAACCATTGTTCTAAGCTGTGTAGAAGTCCTAGCATTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
CDS-3UTR TCA 90 bp CAGAAAGACTCAAATATTATTTCAGTCACTTGTAGCACCATTGGATGTGGGTGCGGTTCTTGCAGGGACTaGATCGAGAGAGATCCAAAA +
Preference number: 4 (lower is better)
Translates to: QKDSNIISVTCSTIGCGCGSCRD*IERDPK
Trigger: TTTTGGATCTCTCTCGATTCAGTCCCTGCAAGAACC...GCACCCACATCCAATGGTGCTACAAGTGACTGAAATAATATTTGAGTCTTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
CDS-3UTR TCA 90 bp TGTGGGTGCACACTTGGCCTAAAATACCATTTACATCATTATCTTGTCCTGTTGACAACTTCTGACACTTaGGGGTTACCCAATGGTCTC +
Preference number: 4 (lower is better)
Translates to: CGCTLGLKYHLHHYLVLLTTSDT*GLPNGL
Trigger: GAGACCATTGGGTAACCCTCAAGTGTCAGAAGTTGT...CAACAGGACAAGATAATGATGTAAATGGTATTTTAGGCCAAGTGTGCACCCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR TCA 90 bp CAGCTCACCCGCAACCTGAACATAGGTTCTGTAACGTATCTCATTGTTACTCAGAACTCATCTTGGTATTaGGTTAGTGCATTGACTTCC +
Preference number: 4 (lower is better)
Translates to: QLTRNLNIGSVTYLIVTQNSSWY*VSALTS
Trigger: GGAAGTCAATGCACTAACTCAATACCAAGATGAGTT...CTGAGTAACAATGAGATACGTTACAGAACCTATGTTCAGGTTGCGGGTGAGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR TCA 90 bp AATGGACTGATGTTTCTATTACAAGATCCTATAATGCTAGGACTTCTACACAGCTTTGGTACTGTTGGCTaGGACTGGCCGAGGAATGTG +
Preference number: 4 (lower is better)
Translates to: NGLMFLLQDPIMLGLLHSFGTVG*DWPRNV
Trigger: CACATTCCTCGGCCAGTCTCAGCCAACAGTACCAAA...GCTGTGTAGAAGTCCTAGCATTATAGGATCTTGTAATAGAAACATCAGTCCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR TCA 90 bp ATTACAAGATCCTATAATGCTAGGACTTCTACACAGCTTAGAACAATGGTTGGATTTGGTACTGTTGGCTaGGACTGGCCGAGGAATGTG +
Preference number: 4 (lower is better)
Translates to: ITRSYNARTSTQLRTMVGFGTVG*DWPRNV
Trigger: CACATTCCTCGGCCAGTCTCAGCCAACAGTACCAAA...TCCAACCATTGTTCTAAGCTGTGTAGAAGTCCTAGCATTATAGGATCTTGTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR TCA 90 bp GTTTCTATTACAAGATCCTATAATGCTAGGACTTCTACACAGCTTAGAACAATGCATCTCCTTCCCTCCTaGCATCATGGCGAAGCTCCT +
Preference number: 4 (lower is better)
Translates to: VSITRSYNARTSTQLRTMHLLPS*HHGEAP
Trigger: AGGAGCTTCGCCATGATGTCAGGAGGGAAGGAGATG...CATTGTTCTAAGCTGTGTAGAAGTCCTAGCATTATAGGATCTTGTAATAGAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518525.5
CDS-3UTR GCA 90 bp TTTCACCTCTTTTCACCAGCACTCCCACCCATTCCCGTTAGAAATATTTTGTTATTCATGTTGAGAAGCTaGTCACACCAAGGGGCTGAA +
Preference number: 4 (lower is better)
Translates to: FHLFSPALPPIPVRNILLFMLRS*SHQGAE
Trigger: TTCAGCCCCTTGGTGTGAGCAGCTTCTCAACATGAA...TAACAAAATATTTCTAACGGGAATGGGTGGGAGTGCTGGTGAAAAGAGGTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR GCA 90 bp TGGTTTTCATTGTCAAGTCACTGTAGTCAACGTTGTCGCTGGAAATTTCAATGCTTCATGTTGAGAAGCTaGTCACACCAAGGGGCTGAA +
Preference number: 4 (lower is better)
Translates to: WFSLSSHCSQRCRWKFQCFMLRS*SHQGAE
Trigger: TTCAGCCCCTTGGTGTGAGCAGCTTCTCAACATGAA...GCATTGAAATTTCCAGCGACAACGTTGACTACAGTGACTTGACAATGAAAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519385.5
CDS-3UTR GCA 90 bp GAACAGGAAGCTAAGAAATTAAAGATGGCGAGATTGTCTAAAATAACTGAGGCTCCCCAGCTTTCCAGCTaGAACTTGCATGTCTGTGTG +
Preference number: 4 (lower is better)
Translates to: EQEAKKLKMARLSKITEAPQLSS*NLHVCV
Trigger: CACACAGACATGCAAGTTGCAGCTGGAAAGCTGGGG...AGCCTCAGTTATTTTAGACAATCTCGCCATCTTTAATTTCTTAGCTTCCTGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR GCA 90 bp AAATACCATTTACATCATTATCTTGTCCTGTTGAAGACCTATGGCATGCAAGAACGGTCGTCACTCCAATaGAGGTTCTTGCAGGGACTG +
Preference number: 4 (lower is better)
Translates to: KYHLHHYLVLLKTYGMQERSSLQ*RFLQGL
Trigger: CAGTCCCTGCAAGAACCTGCATTGGAGTGACGACCG...TTCTTGCATGCCATAGGTCTTCAACAGGACAAGATAATGATGTAAATGGTATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR GCA 90 bp CCCATCTTTTCTCGGAAGACAAACTTGAACTTGTCGCTGGTTTTCATTGTCAAGACCATTGGATGTGGGTaGACACTTGGCCTAAAATAC +
Preference number: 4 (lower is better)
Translates to: PIFSRKTNLNLSLVFIVKTIGCG*TLGLKY
Trigger: GTATTTTAGGCCAAGTGTGCACCCACATCCAATGGT...CTTGACAATGAAAACCAGCGACAAGTTCAAGTTTGTCTTCCGAGAAAAGATGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000519385.5
CDS-3UTR GCA 90 bp GCAGCTAGAAAATGGACTCAATTCTGCAAGCCTTCATGGCAACAGCCCATATTAGAGCAAAGGGATGAATaGTCCTCTTGGAATGATACA +
Preference number: 4 (lower is better)
Translates to: AARKWTQFCKPSWQQPILEQRDE*SSWNDT
Trigger: TGTATCATTCCAAGAGGAGCATTCATCCCTTTGCTC...TAATATGGGCTGTTGCCATGAAGGCTTGCAGAATTGAGTCCATTTTCTAGCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR GCA 90 bp TATAATGCTAGGACTTCTACACAGCTTAGAACAATGGTTGGAGCTTCATTCTTTACTGGCCGAGGAATGTaGATCTCTGGCTGGATTTGG +
Preference number: 4 (lower is better)
Translates to: YNARTSTQLRTMVGASFFTGRGM*ISGWIW
Trigger: CCAAATCCAGCCAGAGATGCACATTCCTCGGCCAGT...AAAGAATGAAGCTCCAACCATTGTTCTAAGCTGTGTAGAAGTCCTAGCATTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR GCA 90 bp CATTGGATGTGGGTGCACACTTGGCCTAAAATACCATTTACATCATTATCTTGTCTTTGTTGTCCCCAATaGAGGTTCTTGCAGGGACTG +
Preference number: 4 (lower is better)
Translates to: HWMWVHTWPKIPFTSLSCLCCPQ*RFLQGL
Trigger: CAGTCCCTGCAAGAACCTGCATTGGGGACAACAAAG...ACAAGATAATGATGTAAATGGTATTTTAGGCCAAGTGTGCACCCACATCCAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519385.5
CDS-3UTR CCA 90 bp CTTCCAGTATGGGGAATCCATTGTATCTTAGAACCGAGGGATTTGTTTAGATTGGTCGGAGGTATATGGTaGCTGTGTAGTCCATGTTAC +
Preference number: 4 (lower is better)
Translates to: LPVWGIHCILEPRDLFRLVGGIW*LCSPCY
Trigger: GTAACATGGACTACACAGCCACCATATACCTCCGAC...CAATCTAAACAAATCCCTCGGTTCTAAGATACAATGGATTCCCCATACTGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR CCA 90 bp CTACACAGCTTAGAACAATGGTTGGAGCTTCATTCTTTGAGCAGAAAGACTCAAGTCGGAGGTATATGGTaGCTGTGTAGTCCATGTTAC +
Preference number: 4 (lower is better)
Translates to: LHSLEQWLELHSLSRKTQVGGIW*LCSPCY
Trigger: GTAACATGGACTACACAGCCACCATATACCTCCGAC...TTGAGTCTTTCTGCTCAAAGAATGAAGCTCCAACCATTGTTCTAAGCTGTGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
CDS-3UTR CCA 90 bp ACTTCTACACAGCTTAGAACAATGGTTGGAGCTTCATTCTTTGAGCAGAAAGACCACAATGTAAGTATCTaGCACCCAGAGGAACTCCAC +
Preference number: 4 (lower is better)
Translates to: TSTQLRTMVGASFFEQKDHNVSI*HPEELH
Trigger: GTGGAGTTCCTCTGGGTGCCAGATACTTACATTGTG...GTCTTTCTGCTCAAAGAATGAAGCTCCAACCATTGTTCTAAGCTGTGTAGAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
CDS-3UTR CCA 90 bp TGTGGGTGCACACTTGGCCTAAAATACCATTTACATCATTATCTTGTCCTGTTGCACAATGTAAGTATCTaGCACCCAGAGGAACTCCAC +
Preference number: 4 (lower is better)
Translates to: CGCTLGLKYHLHHYLVLLHNVSI*HPEELH
Trigger: GTGGAGTTCCTCTGGGTGCCAGATACTTACATTGTG...CAACAGGACAAGATAATGATGTAAATGGTATTTTAGGCCAAGTGTGCACCCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
CDS-3UTR CCA 90 bp TCTACACAGCTTAGAACAATGGTTGGAGCTTCATTCTTTGAGCAGAAAGACTCAACACCACCAGGAAAGTaGAAGGAACGTAGGTTTCCA +
Preference number: 4 (lower is better)
Translates to: STQLRTMVGASFFEQKDSTPPGK*KERRFP
Trigger: TGGAAACCTACGTTCCTTCCACTTTCCTGGTGGTGT...TGAGTCTTTCTGCTCAAAGAATGAAGCTCCAACCATTGTTCTAAGCTGTGTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
CDS-3UTR CCA 90 bp TTTCACCTCTTTTCACCAGCACTCCCACCCATTCCCGTTAGAAATATTTTGTTAACCCGATCATCAGTGTaGTCATTGATAACACGGTCG +
Preference number: 4 (lower is better)
Translates to: FHLFSPALPPIPVRNILLTRSSV*SLITRS
Trigger: CGACCGTGTTATCAATGACCACACTGATGATCGGGT...TAACAAAATATTTCTAACGGGAATGGGTGGGAGTGCTGGTGAAAAGAGGTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR CCA 90 bp ATACAACCACATTTCACCTCTTTTCACCAGCACTCCCACCCATTCCCGTTAGAAAGAGTCCTTCCAGTATaGGGAATCCATTGTATCTTA +
Preference number: 4 (lower is better)
Translates to: IQPHFTSFHQHSHPFPLERVLPV*GIHCIL
Trigger: TAAGATACAATGGATTCCCCATACTGGAAGGACTCT...TTCTAACGGGAATGGGTGGGAGTGCTGGTGAAAAGAGGTGAAATGTGGTTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR CCA 90 bp CCACATTTCACCTCTTTTCACCAGCACTCCCACCCATTCCCGTTAGAAATATTTTTCTGCAAGCCTTCATaGCAACAGCCCATATTAAGA +
Preference number: 4 (lower is better)
Translates to: PHFTSFHQHSHPFPLEIFFCKPS*QQPILR
Trigger: TCTTAATATGGGCTGTTGCCATGAAGGCTTGCAGAA...AAATATTTCTAACGGGAATGGGTGGGAGTGCTGGTGAAAAGAGGTGAAATGTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR CCA 90 bp GTTTCTATTACAAGATCCTATAATGCTAGGACTTCTACACAGCTTAGAACAATGCAGGGGATCTGCCACTaGGAGAGTGTTGCTCAGTGT +
Preference number: 4 (lower is better)
Translates to: VSITRSYNARTSTQLRTMQGICH*ESVAQC
Trigger: ACACTGAGCAACACTCTCCCAGTGGCAGATCCCCTG...CATTGTTCTAAGCTGTGTAGAAGTCCTAGCATTATAGGATCTTGTAATAGAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR CCA 90 bp CATTGGATGTGGGTGCACACTTGGCCTAAAATACCATTTACATCATTATCTTGTAGGAATGTGCATCTCTaGCTGGATTTGGAGAGGGCA +
Preference number: 4 (lower is better)
Translates to: HWMWVHTWPKIPFTSLSCRNVHL*LDLERA
Trigger: TGCCCTCTCCAAATCCAGCCAGAGATGCACATTCCT...ACAAGATAATGATGTAAATGGTATTTTAGGCCAAGTGTGCACCCACATCCAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR CCA 90 bp ACCATTGGATGTGGGTGCACACTTGGCCTAAAATACCATTTACATCATTATCTTCACTTTTGGTACTGTTaGCTGAGACTGGCCGAGGAA +
Preference number: 4 (lower is better)
Translates to: TIGCGCTLGLKYHLHHYLHFWYC*LRLAEE
Trigger: TTCCTCGGCCAGTCTCAGCCAACAGTACCAAAAGTG...AAGATAATGATGTAAATGGTATTTTAGGCCAAGTGTGCACCCACATCCAATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR CCA 90 bp GCTAGGACTTCTACACAGCTTAGAACAATGGTTGGAGCTTCATTCTTTGAGCAGTGGAAGCCTTTACCCTaGCACACTCAAAAATCACTT +
Preference number: 4 (lower is better)
Translates to: ARTSTQLRTMVGASFFEQWKPLP*HTQKSL
Trigger: AAGTGATTTTTGAGTGTGCCAGGGTAAAGGCTTCCA...CTGCTCAAAGAATGAAGCTCCAACCATTGTTCTAAGCTGTGTAGAAGTCCTAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR TCA 90 bp TCTTTGAGCAGAAAGACTCAAATATTATTTCAGTCACTTGTAGCACCATTGGATCTCACACCAAGGGGCTaGAGTAGGAATCACCAGGTA +
Preference number: 4 (lower is better)
Translates to: SLSRKTQILFQSLVAPLDLTPRG*SRNHQV
Trigger: TACCTGGTGATTCCTACTTCAGCCCCTTGGTGTGAG...ATCCAATGGTGCTACAAGTGACTGAAATAATATTTGAGTCTTTCTGCTCAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
CDS-3UTR TCA 90 bp AAATACCATTTACATCATTATCTTGTCCTGTTGAAGACCTATGGCATGCAAGAAGCCTGTTTCCCACAGTaGCTTCATGGAGGAAGGACT +
Preference number: 4 (lower is better)
Translates to: KYHLHHYLVLLKTYGMQEACFPQ*LHGGRT
Trigger: AGTCCTTCCTCCATGAAGTCACTGTGGGAAACAGGC...TTCTTGCATGCCATAGGTCTTCAACAGGACAAGATAATGATGTAAATGGTATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
CDS-3UTR TCA 90 bp TCTACACAGCTTAGAACAATGGTTGGAGCTTCATTCTTTGAGCAGAAAGACTCACTCGGAAGACAAACTTaGACTTGTCGCTGGTTTTCA +
Preference number: 4 (lower is better)
Translates to: STQLRTMVGASFFEQKDSLGRQT*TCRWFS
Trigger: TGAAAACCAGCGACAAGTTCAAGTTTGTCTTCCGAG...TGAGTCTTTCTGCTCAAAGAATGAAGCTCCAACCATTGTTCTAAGCTGTGTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
CDS-3UTR TCA 90 bp CAGCTCACCCGCAACCTGAACATAGGTTCTGTAACGTATCTCATTGTTACTCAGTGGAGCTTCATTCTTTaGGCAGAAAGACTCAAATAT +
Preference number: 4 (lower is better)
Translates to: QLTRNLNIGSVTYLIVTQWSFIL*AERLKY
Trigger: ATATTTGAGTCTTTCTGCTCAAAGAATGAAGCTCCA...CTGAGTAACAATGAGATACGTTACAGAACCTATGTTCAGGTTGCGGGTGAGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR TCA 90 bp GCAGCTAGAAAATGGACTCAATTCTGCAAGCCTTCATGGCAACAGCCCATATTAAACTCATCTTGGTATTaGGTTAGTGCATTGACTTCC +
Preference number: 4 (lower is better)
Translates to: AARKWTQFCKPSWQQPILNSSWY*VSALTS
Trigger: GGAAGTCAATGCACTAACTCAATACCAAGATGAGTT...TAATATGGGCTGTTGCCATGAAGGCTTGCAGAATTGAGTCCATTTTCTAGCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR TCA 90 bp CTACACAGCTTAGAACAATGGTTGGAGCTTCATTCTTTGAGCAGAAAGACTCAAATGACAGCGACTCTCTaGGTCAACCCAGTACTTTTA +
Preference number: 4 (lower is better)
Translates to: LHSLEQWLELHSLSRKTQMTATL*VNPVLL
Trigger: TAAAAGTACTGGGTTGACTCAGAGAGTCGCTGTCAT...TTGAGTCTTTCTGCTCAAAGAATGAAGCTCCAACCATTGTTCTAAGCTGTGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR TCA 90 bp AATGGACTGATGTTTCTATTACAAGATCCTATAATGCTAGGACTTCTACACAGCGCAGCAATGACAGAATaGCAGCGACTCTCTGAGTCA +
Preference number: 4 (lower is better)
Translates to: NGLMFLLQDPIMLGLLHSAAMTE*QRLSES
Trigger: TGACTCAGAGAGTCGCTGTCATTCTGTCATTGCTGC...GCTGTGTAGAAGTCCTAGCATTATAGGATCTTGTAATAGAAACATCAGTCCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR TCA 90 bp GCTTCATTCTTTGAGCAGAAAGACTCAAATATTATTTCAGTCACTTGTAGCACCGCAGCAATGACAGAATaGCAGCGACTCTCTGAGTCA +
Preference number: 4 (lower is better)
Translates to: ASFFEQKDSNIISVTCSTAAMTE*QRLSES
Trigger: TGACTCAGAGAGTCGCTGTCATTCTGTCATTGCTGC...GGTGCTACAAGTGACTGAAATAATATTTGAGTCTTTCTGCTCAAAGAATGAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR GCA 90 bp AAATGGACTCAATTCTGCAAGCCTTCATGGCAACAGCCCATATTAAGACTTCTAAATGCTAGAGATACTTaGAATGTCCAGAGTCAGCGC +
Preference number: 4 (lower is better)
Translates to: KWTQFCKPSWQQPILRLLNARDT*NVQSQR
Trigger: GCGCTGACTCTGGACATTGCAAGTATCTCTAGCATT...TAGAAGTCTTAATATGGGCTGTTGCCATGAAGGCTTGCAGAATTGAGTCCATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR GCA 90 bp AAATACCATTTACATCATTATCTTGTCCTGTTGAAGACCTATGGCATGCAAGAACCCCAGCTTTCCAGCTaGAACTTGCATGTCTGTGTG +
Preference number: 4 (lower is better)
Translates to: KYHLHHYLVLLKTYGMQEPQLSS*NLHVCV
Trigger: CACACAGACATGCAAGTTGCAGCTGGAAAGCTGGGG...TTCTTGCATGCCATAGGTCTTCAACAGGACAAGATAATGATGTAAATGGTATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
CDS-3UTR GCA 90 bp GAACAGGAAGCTAAGAAATTAAAGATGGCGAGATTGTCTAAAATAACTGAGGCTATGATACAGGGGATCTaGCACTGGGAGAGTGTTGCT +
Preference number: 4 (lower is better)
Translates to: EQEAKKLKMARLSKITEAMIQGI*HWESVA
Trigger: AGCAACACTCTCCCAGTGGCAGATCCCCTGTATCAT...AGCCTCAGTTATTTTAGACAATCTCGCCATCTTTAATTTCTTAGCTTCCTGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR GCA 90 bp GTTTCTATTACAAGATCCTATAATGCTAGGACTTCTACACAGCTTAGAACAATGACTGGCCGAGGAATGTaGATCTCTGGCTGGATTTGG +
Preference number: 4 (lower is better)
Translates to: VSITRSYNARTSTQLRTMTGRGM*ISGWIW
Trigger: CCAAATCCAGCCAGAGATGCACATTCCTCGGCCAGT...CATTGTTCTAAGCTGTGTAGAAGTCCTAGCATTATAGGATCTTGTAATAGAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR CCA 90 bp GAATGGACTGATGTTTCTATTACAAGATCCTATAATGCTAGGACTTCTACACAGCCCACAGTGACTTCATaGAGGAAGGACTTCTTGGAC +
Preference number: 4 (lower is better)
Translates to: EWTDVSITRSYNARTSTQPTVTS*RKDFLD
Trigger: GTCCAAGAAGTCCTTCCTCCATGAAGTCACTGTGGG...CTGTGTAGAAGTCCTAGCATTATAGGATCTTGTAATAGAAACATCAGTCCATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
CDS-3UTR CCA 90 bp GCTAGGACTTCTACACAGCTTAGAACAATGGTTGGAGCTTCATTCTTTGAGCAGATGTGGGTGCACACTTaGCCTAAAATACCATTTACA +
Preference number: 4 (lower is better)
Translates to: ARTSTQLRTMVGASFFEQMWVHT*PKIPFT
Trigger: TGTAAATGGTATTTTAGGCCAAGTGTGCACCCACAT...CTGCTCAAAGAATGAAGCTCCAACCATTGTTCTAAGCTGTGTAGAAGTCCTAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
CDS-3UTR CCA 90 bp CAGAAAGACTCAAATATTATTTCAGTCACTTGTAGCACCATTGGATGTGGGTGCGATGAATGCTCCTCTTaGAATGATACAGGGGATCTG +
Preference number: 4 (lower is better)
Translates to: QKDSNIISVTCSTIGCGCDECSS*NDTGDL
Trigger: CAGATCCCCTGTATCATTCCAAGAGGAGCATTCATC...GCACCCACATCCAATGGTGCTACAAGTGACTGAAATAATATTTGAGTCTTTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR CCA 90 bp GAAGCTAAGAAATTAAAGATGGCGAGATTGTCTAAAATAACTGAGGCTGAACTGCACTTTTGGTACTGTTaGCTGAGACTGGCCGAGGAA +
Preference number: 4 (lower is better)
Translates to: EAKKLKMARLSKITEAELHFWYC*LRLAEE
Trigger: TTCCTCGGCCAGTCTCAGCCAACAGTACCAAAAGTG...CAGTTCAGCCTCAGTTATTTTAGACAATCTCGCCATCTTTAATTTCTTAGCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR CCA 90 bp TTGGGCTCCATGGGAATGTCCTTGATTAAGATGAAAGAGGAATGGACTGATGTTTGGAAGCCTTTACCCTaGCACACTCAAAAATCACTT +
Preference number: 4 (lower is better)
Translates to: LGSMGMSLIKMKEEWTDVWKPLP*HTQKSL
Trigger: AAGTGATTTTTGAGTGTGCCAGGGTAAAGGCTTCCA...AACATCAGTCCATTCCTCTTTCATCTTAATCAAGGACATTCCCATGGAGCCCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR TCA 90 bp TTGGGCTCCATGGGAATGTCCTTGATTAAGATGAAAGAGGAATGGACTGATGTTCACCAAAATTGGGCCTaGGAAATTTGTTATATCCTG +
Preference number: 4 (lower is better)
Translates to: LGSMGMSLIKMKEEWTDVHQNWA*EICYIL
Trigger: CAGGATATAACAAATTTCTCAGGCCCAATTTTGGTG...AACATCAGTCCATTCCTCTTTCATCTTAATCAAGGACATTCCCATGGAGCCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR TCA 90 bp GAATGGACTGATGTTTCTATTACAAGATCCTATAATGCTAGGACTTCTACACAGGGTTCTTGCAGGGACTaGATCGAGAGAGATCCAAAA +
Preference number: 4 (lower is better)
Translates to: EWTDVSITRSYNARTSTQGSCRD*IERDPK
Trigger: TTTTGGATCTCTCTCGATTCAGTCCCTGCAAGAACC...CTGTGTAGAAGTCCTAGCATTATAGGATCTTGTAATAGAAACATCAGTCCATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
CDS-3UTR TCA 90 bp ACCATTGGATGTGGGTGCACACTTGGCCTAAAATACCATTTACATCATTATCTTCTCGGAAGACAAACTTaGACTTGTCGCTGGTTTTCA +
Preference number: 4 (lower is better)
Translates to: TIGCGCTLGLKYHLHHYLLGRQT*TCRWFS
Trigger: TGAAAACCAGCGACAAGTTCAAGTTTGTCTTCCGAG...AAGATAATGATGTAAATGGTATTTTAGGCCAAGTGTGCACCCACATCCAATGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
CDS-3UTR TCA 90 bp ACTTCTACACAGCTTAGAACAATGGTTGGAGCTTCATTCTTTGAGCAGAAAGACATTATCTTGTCCTGTTaGAGACCTATGGCATGCAAG +
Preference number: 4 (lower is better)
Translates to: TSTQLRTMVGASFFEQKDIILSC*RPMACK
Trigger: CTTGCATGCCATAGGTCTTCAACAGGACAAGATAAT...GTCTTTCTGCTCAAAGAATGAAGCTCCAACCATTGTTCTAAGCTGTGTAGAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
CDS-3UTR TCA 90 bp AAATGGACTCAATTCTGCAAGCCTTCATGGCAACAGCCCATATTAAGACTTCTAATTATCTTGTCCTGTTaGAGACCTATGGCATGCAAG +
Preference number: 4 (lower is better)
Translates to: KWTQFCKPSWQQPILRLLIILSC*RPMACK
Trigger: CTTGCATGCCATAGGTCTTCAACAGGACAAGATAAT...TAGAAGTCTTAATATGGGCTGTTGCCATGAAGGCTTGCAGAATTGAGTCCATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR TCA 90 bp CCACATTTCACCTCTTTTCACCAGCACTCCCACCCATTCCCGTTAGAAATATTTTGCATTGACTTCCAATaGATTGACATAAGCCCATAT +
Preference number: 4 (lower is better)
Translates to: PHFTSFHQHSHPFPLEIFCIDFQ*IDISPY
Trigger: ATATGGGCTTATGTCAATTCATTGGAAGTCAATGCA...AAATATTTCTAACGGGAATGGGTGGGAGTGCTGGTGAAAAGAGGTGAAATGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR TCA 90 bp TGGTTTATTTCTGACAGGAAAGGTAAAGCCGTGCATTTATTAGAACAGGAAGCTATGACAGCGACTCTCTaGGTCAACCCAGTACTTTTA +
Preference number: 4 (lower is better)
Translates to: WFISDRKGKAVHLLEQEAMTATL*VNPVLL
Trigger: TAAAAGTACTGGGTTGACTCAGAGAGTCGCTGTCAT...AGCTTCCTGTTCTAATAAATGCACGGCTTTACCTTTCCTGTCAGAAATAAACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR TCA 90 bp GTTTCTATTACAAGATCCTATAATGCTAGGACTTCTACACAGCTTAGAACAATGATGCTCCTCTTGGAATaGTACAGGGGATCTGCCACT +
Preference number: 4 (lower is better)
Translates to: VSITRSYNARTSTQLRTMMLLLE*YRGSAT
Trigger: AGTGGCAGATCCCCTGTATCATTCCAAGAGGAGCAT...CATTGTTCTAAGCTGTGTAGAAGTCCTAGCATTATAGGATCTTGTAATAGAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR TCA 90 bp TGGTTTATTTCTGACAGGAAAGGTAAAGCCGTGCATTTATTAGAACAGGAAGCTGAAGGATCAGGGATCTaGGCAAAGCCAAGTTTACTT +
Preference number: 4 (lower is better)
Translates to: WFISDRKGKAVHLLEQEAEGSGI*AKPSLL
Trigger: AAGTAAACTTGGCTTTGCTCAGATCCCTGATCCTTC...AGCTTCCTGTTCTAATAAATGCACGGCTTTACCTTTCCTGTCAGAAATAAACCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR GCA 90 bp CCTGCCCATCTTTTCTCGGAAGACAAACTTGAACTTGTCGCTGGTTTTCATTGTAATAATCAACAATCCTaGCCATCTTTTCTCGGAAGA +
Preference number: 4 (lower is better)
Translates to: PAHLFSEDKLELVAGFHCNNQQS*PSFLGR
Trigger: TCTTCCGAGAAAAGATGGGCAGGATTGTTGATTATT...ACAATGAAAACCAGCGACAAGTTCAAGTTTGTCTTCCGAGAAAAGATGGGCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000519385.5
CDS-3UTR GCA 90 bp CTTCCAGTATGGGGAATCCATTGTATCTTAGAACCGAGGGATTTGTTTAGATTGAAATGGACTCAATTCTaGAAGCCTTCATGGCAACAG +
Preference number: 4 (lower is better)
Translates to: LPVWGIHCILEPRDLFRLKWTQF*KPSWQQ
Trigger: CTGTTGCCATGAAGGCTTGCAGAATTGAGTCCATTT...CAATCTAAACAAATCCCTCGGTTCTAAGATACAATGGATTCCCCATACTGGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR GCA 90 bp TGTGGGTGCACACTTGGCCTAAAATACCATTTACATCATTATCTTGTCCTGTTGAAATGGACTCAATTCTaGAAGCCTTCATGGCAACAG +
Preference number: 4 (lower is better)
Translates to: CGCTLGLKYHLHHYLVLLKWTQF*KPSWQQ
Trigger: CTGTTGCCATGAAGGCTTGCAGAATTGAGTCCATTT...CAACAGGACAAGATAATGATGTAAATGGTATTTTAGGCCAAGTGTGCACCCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR GCA 90 bp AAGATGAAAGAGGAATGGACTGATGTTTCTATTACAAGATCCTATAATGCTAGGATGATACAGGGGATCTaGCACTGGGAGAGTGTTGCT +
Preference number: 4 (lower is better)
Translates to: KMKEEWTDVSITRSYNARMIQGI*HWESVA
Trigger: AGCAACACTCTCCCAGTGGCAGATCCCCTGTATCAT...CCTAGCATTATAGGATCTTGTAATAGAAACATCAGTCCATTCCTCTTTCATCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR CCA 90 bp GTTTCTATTACAAGATCCTATAATGCTAGGACTTCTACACAGCTTAGAACAATGGCTGTCGGAGGTATATaGTGGCTGTGTAGTCCATGT +
Preference number: 4 (lower is better)
Translates to: VSITRSYNARTSTQLRTMAVGGI*WLCSPC
Trigger: ACATGGACTACACAGCCACCATATACCTCCGACAGC...CATTGTTCTAAGCTGTGTAGAAGTCCTAGCATTATAGGATCTTGTAATAGAAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
CDS-3UTR CCA 90 bp CTACACAGCTTAGAACAATGGTTGGAGCTTCATTCTTTGAGCAGAAAGACTCAAGGAGGAAGGACTTCTTaGACTCCACAATGTAAGTAT +
Preference number: 4 (lower is better)
Translates to: LHSLEQWLELHSLSRKTQGGRTS*TPQCKY
Trigger: ATACTTACATTGTGGAGTCCAAGAAGTCCTTCCTCC...TTGAGTCTTTCTGCTCAAAGAATGAAGCTCCAACCATTGTTCTAAGCTGTGTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
CDS-3UTR CCA 90 bp GTTTCTATTACAAGATCCTATAATGCTAGGACTTCTACACAGCTTAGAACAATGTTGTCCCCCTATCTTTaGCTGCCATCTGCTGTAAGG +
Preference number: 4 (lower is better)
Translates to: VSITRSYNARTSTQLRTMLSPYL*LPSAVR
Trigger: CCTTACAGCAGATGGCAGCCAAAGATAGGGGGACAA...CATTGTTCTAAGCTGTGTAGAAGTCCTAGCATTATAGGATCTTGTAATAGAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR CCA 90 bp CAGAAAGACTCAAATATTATTTCAGTCACTTGTAGCACCATTGGATGTGGGTGCAGTCAACGTTGTCGCTaGAAATTTCAATGCTGGCAA +
Preference number: 4 (lower is better)
Translates to: QKDSNIISVTCSTIGCGCSQRCR*KFQCWQ
Trigger: TTGCCAGCATTGAAATTTCCAGCGACAACGTTGACT...GCACCCACATCCAATGGTGCTACAAGTGACTGAAATAATATTTGAGTCTTTCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
CDS-3UTR CCA 90 bp ACTTCTACACAGCTTAGAACAATGGTTGGAGCTTCATTCTTTGAGCAGAAAGACAGTCAACGTTGTCGCTaGAAATTTCAATGCTGGCAA +
Preference number: 4 (lower is better)
Translates to: TSTQLRTMVGASFFEQKDSQRCR*KFQCWQ
Trigger: TTGCCAGCATTGAAATTTCCAGCGACAACGTTGACT...GTCTTTCTGCTCAAAGAATGAAGCTCCAACCATTGTTCTAAGCTGTGTAGAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
CDS-3UTR CCA 90 bp CTTGTCGCTGGTTTTCATTGTCAAGTCACTGTAGTCAACGTTGTCGCTGGAAATCCTGTTGAAGACCTATaGCATGCAAGAAATTTAACA +
Preference number: 4 (lower is better)
Translates to: LVAGFHCQVTVVNVVAGNPVEDL*HARNLT
Trigger: TGTTAAATTTCTTGCATGCCATAGGTCTTCAACAGG...ATTTCCAGCGACAACGTTGACTACAGTGACTTGACAATGAAAACCAGCGACAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519385.5
CDS-3UTR CCA 90 bp ACTTCTACACAGCTTAGAACAATGGTTGGAGCTTCATTCTTTGAGCAGAAAGACTTGAGGGTTACCCAATaGTCTCCTTCCCATTCTTTA +
Preference number: 4 (lower is better)
Translates to: TSTQLRTMVGASFFEQKDLRVTQ*SPSHSL
Trigger: TAAAGAATGGGAAGGAGACCATTGGGTAACCCTCAA...GTCTTTCTGCTCAAAGAATGAAGCTCCAACCATTGTTCTAAGCTGTGTAGAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR CCA 90 bp CTACACAGCTTAGAACAATGGTTGGAGCTTCATTCTTTGAGCAGAAAGACTCAATTGAGGGTTACCCAATaGTCTCCTTCCCATTCTTTA +
Preference number: 4 (lower is better)
Translates to: LHSLEQWLELHSLSRKTQLRVTQ*SPSHSL
Trigger: TAAAGAATGGGAAGGAGACCATTGGGTAACCCTCAA...TTGAGTCTTTCTGCTCAAAGAATGAAGCTCCAACCATTGTTCTAAGCTGTGTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR CCA 90 bp CATTGGATGTGGGTGCACACTTGGCCTAAAATACCATTTACATCATTATCTTGTGATGAATGCTCCTCTTaGAATGATACAGGGGATCTG +
Preference number: 4 (lower is better)
Translates to: HWMWVHTWPKIPFTSLSCDECSS*NDTGDL
Trigger: CAGATCCCCTGTATCATTCCAAGAGGAGCATTCATC...ACAAGATAATGATGTAAATGGTATTTTAGGCCAAGTGTGCACCCACATCCAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR TCA 90 bp AAGATGAAAGAGGAATGGACTGATGTTTCTATTACAAGATCCTATAATGCTAGGGGTTCTTGCAGGGACTaGATCGAGAGAGATCCAAAA +
Preference number: 4 (lower is better)
Translates to: KMKEEWTDVSITRSYNARGSCRD*IERDPK
Trigger: TTTTGGATCTCTCTCGATTCAGTCCCTGCAAGAACC...CCTAGCATTATAGGATCTTGTAATAGAAACATCAGTCCATTCCTCTTTCATCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
CDS-3UTR TCA 90 bp AATGGACTGATGTTTCTATTACAAGATCCTATAATGCTAGGACTTCTACACAGCCTCGGAAGACAAACTTaGACTTGTCGCTGGTTTTCA +
Preference number: 4 (lower is better)
Translates to: NGLMFLLQDPIMLGLLHSLGRQT*TCRWFS
Trigger: TGAAAACCAGCGACAAGTTCAAGTTTGTCTTCCGAG...GCTGTGTAGAAGTCCTAGCATTATAGGATCTTGTAATAGAAACATCAGTCCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
CDS-3UTR TCA 90 bp CCCATCTTTTCTCGGAAGACAAACTTGAACTTGTCGCTGGTTTTCATTGTCAAGTGGAGCTTCATTCTTTaGGCAGAAAGACTCAAATAT +
Preference number: 4 (lower is better)
Translates to: PIFSRKTNLNLSLVFIVKWSFIL*AERLKY
Trigger: ATATTTGAGTCTTTCTGCTCAAAGAATGAAGCTCCA...CTTGACAATGAAAACCAGCGACAAGTTCAAGTTTGTCTTCCGAGAAAAGATGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519385.5
CDS-3UTR TCA 90 bp CGCTGGTTTTCATTGTCAAGTCACTGTAGTCAACGTTGTCGCTGGAAATTTCAAGAAAGAGGAATGGACTaGTGTTTCTATTACAAGATC +
Preference number: 4 (lower is better)
Translates to: RWFSLSSHCSQRCRWKFQERGMD*CFYYKI
Trigger: GATCTTGTAATAGAAACATCAGTCCATTCCTCTTTC...TTGAAATTTCCAGCGACAACGTTGACTACAGTGACTTGACAATGAAAACCAGCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519385.5
CDS-3UTR TCA 90 bp ACTTCTACACAGCTTAGAACAATGGTTGGAGCTTCATTCTTTGAGCAGAAAGACTTTAGAAACAACTTCTaGCACTTGAGGGTTACCCAA +
Preference number: 4 (lower is better)
Translates to: TSTQLRTMVGASFFEQKDFRNNF*HLRVTQ
Trigger: TTGGGTAACCCTCAAGTGTCAGAAGTTGTTTCTAAA...GTCTTTCTGCTCAAAGAATGAAGCTCCAACCATTGTTCTAAGCTGTGTAGAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR GCA 90 bp CTACACAGCTTAGAACAATGGTTGGAGCTTCATTCTTTGAGCAGAAAGACTCAACAGATCCATGTTACATaGAACAGTTGTCGTGATTCT +
Preference number: 4 (lower is better)
Translates to: LHSLEQWLELHSLSRKTQQIHVT*NSCRDS
Trigger: AGAATCACGACAACTGTTGCATGTAACATGGATCTG...TTGAGTCTTTCTGCTCAAAGAATGAAGCTCCAACCATTGTTCTAAGCTGTGTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
CDS-3UTR GCA 90 bp AATGGACTGATGTTTCTATTACAAGATCCTATAATGCTAGGACTTCTACACAGCACCATTGGATGTGGGTaGACACTTGGCCTAAAATAC +
Preference number: 4 (lower is better)
Translates to: NGLMFLLQDPIMLGLLHSTIGCG*TLGLKY
Trigger: GTATTTTAGGCCAAGTGTGCACCCACATCCAATGGT...GCTGTGTAGAAGTCCTAGCATTATAGGATCTTGTAATAGAAACATCAGTCCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
CDS-3UTR CCA 90 bp TCTTTGAGCAGAAAGACTCAAATATTATTTCAGTCACTTGTAGCACCATTGGATCACAATGTAAGTATCTaGCACCCAGAGGAACTCCAC +
Preference number: 4 (lower is better)
Translates to: SLSRKTQILFQSLVAPLDHNVSI*HPEELH
Trigger: GTGGAGTTCCTCTGGGTGCCAGATACTTACATTGTG...ATCCAATGGTGCTACAAGTGACTGAAATAATATTTGAGTCTTTCTGCTCAAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
CDS-3UTR CCA 90 bp CATTGGATGTGGGTGCACACTTGGCCTAAAATACCATTTACATCATTATCTTGTGGAGGAAGGACTTCTTaGACTCCACAATGTAAGTAT +
Preference number: 4 (lower is better)
Translates to: HWMWVHTWPKIPFTSLSCGGRTS*TPQCKY
Trigger: ATACTTACATTGTGGAGTCCAAGAAGTCCTTCCTCC...ACAAGATAATGATGTAAATGGTATTTTAGGCCAAGTGTGCACCCACATCCAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
CDS-3UTR CCA 90 bp GAAATAATCAACAATCCTGCCCATCTTTTCTCGGAAGACAAACTTGAACTTGTCGGAGGAAGGACTTCTTaGACTCCACAATGTAAGTAT +
Preference number: 4 (lower is better)
Translates to: EIINNPAHLFSEDKLELVGGRTS*TPQCKY
Trigger: ATACTTACATTGTGGAGTCCAAGAAGTCCTTCCTCC...GACAAGTTCAAGTTTGTCTTCCGAGAAAAGATGGGCAGGATTGTTGATTATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519385.5
CDS-3UTR CCA 90 bp GTTTCTATTACAAGATCCTATAATGCTAGGACTTCTACACAGCTTAGAACAATGACACCACCAGGAAAGTaGAAGGAACGTAGGTTTCCA +
Preference number: 4 (lower is better)
Translates to: VSITRSYNARTSTQLRTMTPPGK*KERRFP
Trigger: TGGAAACCTACGTTCCTTCCACTTTCCTGGTGGTGT...CATTGTTCTAAGCTGTGTAGAAGTCCTAGCATTATAGGATCTTGTAATAGAAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
CDS-3UTR CCA 90 bp TTGGGCTCCATGGGAATGTCCTTGATTAAGATGAAAGAGGAATGGACTGATGTTATTTCCATCCATGCATaGGAAAAGGGCTTTAGTATA +
Preference number: 4 (lower is better)
Translates to: LGSMGMSLIKMKEEWTDVISIHA*EKGFSI
Trigger: TATACTAAAGCCCTTTTCCCATGCATGGATGGAAAT...AACATCAGTCCATTCCTCTTTCATCTTAATCAAGGACATTCCCATGGAGCCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR CCA 90 bp CATTGGATGTGGGTGCACACTTGGCCTAAAATACCATTTACATCATTATCTTGTAAGGCAGCTAGAAAATaGACTCAATTCTGCAAGCCT +
Preference number: 4 (lower is better)
Translates to: HWMWVHTWPKIPFTSLSCKAARK*TQFCKP
Trigger: AGGCTTGCAGAATTGAGTCCATTTTCTAGCTGCCTT...ACAAGATAATGATGTAAATGGTATTTTAGGCCAAGTGTGCACCCACATCCAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR CCA 90 bp CTTCCAGTATGGGGAATCCATTGTATCTTAGAACCGAGGGATTTGTTTAGATTGCTCAAAAATCACTTTTaGTACTGTTGGCTGAGACTG +
Preference number: 4 (lower is better)
Translates to: LPVWGIHCILEPRDLFRLLKNHF*YCWLRL
Trigger: CAGTCTCAGCCAACAGTACCAAAAGTGATTTTTGAG...CAATCTAAACAAATCCCTCGGTTCTAAGATACAATGGATTCCCCATACTGGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR TCA 90 bp GGACTGATGTTTCTATTACAAGATCCTATAATGCTAGGACTTCTACACAGCTTAATTATCTTGTCCTGTTaGAGACCTATGGCATGCAAG +
Preference number: 4 (lower is better)
Translates to: GLMFLLQDPIMLGLLHSLIILSC*RPMACK
Trigger: CTTGCATGCCATAGGTCTTCAACAGGACAAGATAAT...TAAGCTGTGTAGAAGTCCTAGCATTATAGGATCTTGTAATAGAAACATCAGTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
CDS-3UTR TCA 90 bp TTTCACCTCTTTTCACCAGCACTCCCACCCATTCCCGTTAGAAATATTTTGTTAGAAAGAGGAATGGACTaGTGTTTCTATTACAAGATC +
Preference number: 4 (lower is better)
Translates to: FHLFSPALPPIPVRNILLERGMD*CFYYKI
Trigger: GATCTTGTAATAGAAACATCAGTCCATTCCTCTTTC...TAACAAAATATTTCTAACGGGAATGGGTGGGAGTGCTGGTGAAAAGAGGTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR TCA 90 bp ACTTCTACACAGCTTAGAACAATGGTTGGAGCTTCATTCTTTGAGCAGAAAGACGAAAGAGGAATGGACTaGTGTTTCTATTACAAGATC +
Preference number: 4 (lower is better)
Translates to: TSTQLRTMVGASFFEQKDERGMD*CFYYKI
Trigger: GATCTTGTAATAGAAACATCAGTCCATTCCTCTTTC...GTCTTTCTGCTCAAAGAATGAAGCTCCAACCATTGTTCTAAGCTGTGTAGAAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
CDS-3UTR TCA 90 bp TGGTTTATTTCTGACAGGAAAGGTAAAGCCGTGCATTTATTAGAACAGGAAGCTTTCCCATTCTTTATATaGGGTAAATGCAAACCAGGG +
Preference number: 4 (lower is better)
Translates to: WFISDRKGKAVHLLEQEAFPFFI*GKCKPG
Trigger: CCCTGGTTTGCATTTACCTCATATAAAGAATGGGAA...AGCTTCCTGTTCTAATAAATGCACGGCTTTACCTTTCCTGTCAGAAATAAACCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR TCA 90 bp TCTACACAGCTTAGAACAATGGTTGGAGCTTCATTCTTTGAGCAGAAAGACTCATGCATTGACTTCCAATaGATTGACATAAGCCCATAT +
Preference number: 4 (lower is better)
Translates to: STQLRTMVGASFFEQKDSCIDFQ*IDISPY
Trigger: ATATGGGCTTATGTCAATTCATTGGAAGTCAATGCA...TGAGTCTTTCTGCTCAAAGAATGAAGCTCCAACCATTGTTCTAAGCTGTGTAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR GCA 90 bp CAGAAAGACTCAAATATTATTTCAGTCACTTGTAGCACCATTGGATGTGGGTGCAATAATCAACAATCCTaGCCATCTTTTCTCGGAAGA +
Preference number: 4 (lower is better)
Translates to: QKDSNIISVTCSTIGCGCNNQQS*PSFLGR
Trigger: TCTTCCGAGAAAAGATGGGCAGGATTGTTGATTATT...GCACCCACATCCAATGGTGCTACAAGTGACTGAAATAATATTTGAGTCTTTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
CDS-3UTR GCA 90 bp TCTTTGAGCAGAAAGACTCAAATATTATTTCAGTCACTTGTAGCACCATTGGATACCATTGGATGTGGGTaGACACTTGGCCTAAAATAC +
Preference number: 4 (lower is better)
Translates to: SLSRKTQILFQSLVAPLDTIGCG*TLGLKY
Trigger: GTATTTTAGGCCAAGTGTGCACCCACATCCAATGGT...ATCCAATGGTGCTACAAGTGACTGAAATAATATTTGAGTCTTTCTGCTCAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
CDS-3UTR GCA 90 bp TGGCCTAAAATACCATTTACATCATTATCTTGTCCTGTTGAAGACCTATGGCATGAGCAAAGGGATGAATaGTCCTCTTGGAATGATACA +
Preference number: 4 (lower is better)
Translates to: WPKIPFTSLSCPVEDLWHEQRDE*SSWNDT
Trigger: TGTATCATTCCAAGAGGAGCATTCATCCCTTTGCTC...ATGCCATAGGTCTTCAACAGGACAAGATAATGATGTAAATGGTATTTTAGGCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR CCA 90 bp GAACAGGAAGCTAAGAAATTAAAGATGGCGAGATTGTCTAAAATAACTGAGGCTTTCTGCAAGCCTTCATaGCAACAGCCCATATTAAGA +
Preference number: 4 (lower is better)
Translates to: EQEAKKLKMARLSKITEAFCKPS*QQPILR
Trigger: TCTTAATATGGGCTGTTGCCATGAAGGCTTGCAGAA...AGCCTCAGTTATTTTAGACAATCTCGCCATCTTTAATTTCTTAGCTTCCTGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR CCA 90 bp TATAATGCTAGGACTTCTACACAGCTTAGAACAATGGTTGGAGCTTCATTCTTTAAGGCAGCTAGAAAATaGACTCAATTCTGCAAGCCT +
Preference number: 4 (lower is better)
Translates to: YNARTSTQLRTMVGASFFKAARK*TQFCKP
Trigger: AGGCTTGCAGAATTGAGTCCATTTTCTAGCTGCCTT...AAAGAATGAAGCTCCAACCATTGTTCTAAGCTGTGTAGAAGTCCTAGCATTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR CCA 90 bp CATTGGATGTGGGTGCACACTTGGCCTAAAATACCATTTACATCATTATCTTGTCTCAAAAATCACTTTTaGTACTGTTGGCTGAGACTG +
Preference number: 4 (lower is better)
Translates to: HWMWVHTWPKIPFTSLSCLKNHF*YCWLRL
Trigger: CAGTCTCAGCCAACAGTACCAAAAGTGATTTTTGAG...ACAAGATAATGATGTAAATGGTATTTTAGGCCAAGTGTGCACCCACATCCAATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
3UTR CAA 72 bp AGTACATTTGTAATCTTGGGCTCCATGGGAATGTCCTaGATTAAGATGAAAGAGGAATGGACTGATGTTTCT +
Preference number: 4 (lower is better)
Translates to: STFVILGSMGMS*IKMKEEWTDVS
Trigger: AGAAACATCAGTCCATTCCTCTTTCATCTTAATCAAGGACATTCCCATGGAGCCCAAGATTACAAATGTACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR TCA 90 bp TGGCCTAAAATACCATTTACATCATTATCTTGTCCTGTTGAAGACCTATGGCATCACCAAAATTGGGCCTaGGAAATTTGTTATATCCTG +
Preference number: 4 (lower is better)
Translates to: WPKIPFTSLSCPVEDLWHHQNWA*EICYIL
Trigger: CAGGATATAACAAATTTCTCAGGCCCAATTTTGGTG...ATGCCATAGGTCTTCAACAGGACAAGATAATGATGTAAATGGTATTTTAGGCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
CDS-3UTR TCA 90 bp AATGGACTGATGTTTCTATTACAAGATCCTATAATGCTAGGACTTCTACACAGCCACCAAAATTGGGCCTaGGAAATTTGTTATATCCTG +
Preference number: 4 (lower is better)
Translates to: NGLMFLLQDPIMLGLLHSHQNWA*EICYIL
Trigger: CAGGATATAACAAATTTCTCAGGCCCAATTTTGGTG...GCTGTGTAGAAGTCCTAGCATTATAGGATCTTGTAATAGAAACATCAGTCCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
CDS-3UTR TCA 90 bp TCTTTGAGCAGAAAGACTCAAATATTATTTCAGTCACTTGTAGCACCATTGGATGTCCATGTTACTCTCTaGAATGCTAGAGATACTTGC +
Preference number: 4 (lower is better)
Translates to: SLSRKTQILFQSLVAPLDVHVTL*NARDTC
Trigger: GCAAGTATCTCTAGCATTTCAGAGAGTAACATGGAC...ATCCAATGGTGCTACAAGTGACTGAAATAATATTTGAGTCTTTCTGCTCAAAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
CDS-3UTR TCA 90 bp AATGGACTGATGTTTCTATTACAAGATCCTATAATGCTAGGACTTCTACACAGCTTTAGAAACAACTTCTaGCACTTGAGGGTTACCCAA +
Preference number: 4 (lower is better)
Translates to: NGLMFLLQDPIMLGLLHSFRNNF*HLRVTQ
Trigger: TTGGGTAACCCTCAAGTGTCAGAAGTTGTTTCTAAA...GCTGTGTAGAAGTCCTAGCATTATAGGATCTTGTAATAGAAACATCAGTCCATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR TCA 90 bp ACCATTGGATGTGGGTGCACACTTGGCCTAAAATACCATTTACATCATTATCTTAATAAGCATCATTCCTaGTCATTAGAGCAAAGGGAT +
Preference number: 4 (lower is better)
Translates to: TIGCGCTLGLKYHLHHYLNKHHS*SLEQRD
Trigger: ATCCCTTTGCTCTAATGATCAGGAATGATGCTTATT...AAGATAATGATGTAAATGGTATTTTAGGCCAAGTGTGCACCCACATCCAATGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR GCA 90 bp GAAGCTAAGAAATTAAAGATGGCGAGATTGTCTAAAATAACTGAGGCTGAACTGCAGATCCATGTTACATaGAACAGTTGTCGTGATTCT +
Preference number: 4 (lower is better)
Translates to: EAKKLKMARLSKITEAELQIHVT*NSCRDS
Trigger: AGAATCACGACAACTGTTGCATGTAACATGGATCTG...CAGTTCAGCCTCAGTTATTTTAGACAATCTCGCCATCTTTAATTTCTTAGCTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR CCA 90 bp GAACAGGAAGCTAAGAAATTAAAGATGGCGAGATTGTCTAAAATAACTGAGGCTATGTGGGTGCACACTTaGCCTAAAATACCATTTACA +
Preference number: 4 (lower is better)
Translates to: EQEAKKLKMARLSKITEAMWVHT*PKIPFT
Trigger: TGTAAATGGTATTTTAGGCCAAGTGTGCACCCACAT...AGCCTCAGTTATTTTAGACAATCTCGCCATCTTTAATTTCTTAGCTTCCTGTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR CCA 90 bp AATGGACTGATGTTTCTATTACAAGATCCTATAATGCTAGGACTTCTACACAGCATGTGGGTGCACACTTaGCCTAAAATACCATTTACA +
Preference number: 4 (lower is better)
Translates to: NGLMFLLQDPIMLGLLHSMWVHT*PKIPFT
Trigger: TGTAAATGGTATTTTAGGCCAAGTGTGCACCCACAT...GCTGTGTAGAAGTCCTAGCATTATAGGATCTTGTAATAGAAACATCAGTCCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
CDS-3UTR CCA 90 bp GAATGGACTGATGTTTCTATTACAAGATCCTATAATGCTAGGACTTCTACACAGCACAGCTTAGAACAATaGTTGGAGCTTCATTCTTTG +
Preference number: 4 (lower is better)
Translates to: EWTDVSITRSYNARTSTQHSLEQ*LELHSL
Trigger: CAAAGAATGAAGCTCCAACCATTGTTCTAAGCTGTG...CTGTGTAGAAGTCCTAGCATTATAGGATCTTGTAATAGAAACATCAGTCCATTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
CDS-3UTR CCA 90 bp ATTACAAGATCCTATAATGCTAGGACTTCTACACAGCTTAGAACAATGGTTGGACACAGCTTAGAACAATaGTTGGAGCTTCATTCTTTG +
Preference number: 4 (lower is better)
Translates to: ITRSYNARTSTQLRTMVGHSLEQ*LELHSL
Trigger: CAAAGAATGAAGCTCCAACCATTGTTCTAAGCTGTG...TCCAACCATTGTTCTAAGCTGTGTAGAAGTCCTAGCATTATAGGATCTTGTAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
CDS-3UTR CCA 90 bp GAAGCTAAGAAATTAAAGATGGCGAGATTGTCTAAAATAACTGAGGCTGAACTGAGAGTCCTTCCAGTATaGGGAATCCATTGTATCTTA +
Preference number: 4 (lower is better)
Translates to: EAKKLKMARLSKITEAELRVLPV*GIHCIL
Trigger: TAAGATACAATGGATTCCCCATACTGGAAGGACTCT...CAGTTCAGCCTCAGTTATTTTAGACAATCTCGCCATCTTTAATTTCTTAGCTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR CCA 90 bp ACCATTGGATGTGGGTGCACACTTGGCCTAAAATACCATTTACATCATTATCTTATTTCCATCCATGCATaGGAAAAGGGCTTTAGTATA +
Preference number: 4 (lower is better)
Translates to: TIGCGCTLGLKYHLHHYLISIHA*EKGFSI
Trigger: TATACTAAAGCCCTTTTCCCATGCATGGATGGAAAT...AAGATAATGATGTAAATGGTATTTTAGGCCAAGTGTGCACCCACATCCAATGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
3UTR CAA 72 bp ATAATGCTAGGACTTCTACACAGCTTAGAACAATGGTaGGAGCTTCATTCTTTGAGCAGAAAGACTCAAATA +
Preference number: 4 (lower is better)
Translates to: IMLGLLHSLEQW*ELHSLSRKTQI
Trigger: TATTTGAGTCTTTCTGCTCAAAGAATGAAGCTCCAACCATTGTTCTAAGCTGTGTAGAAGTCCTAGCATTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
CDS-3UTR TCA 90 bp GAACAGGAAGCTAAGAAATTAAAGATGGCGAGATTGTCTAAAATAACTGAGGCTTGGAGCTTCATTCTTTaGGCAGAAAGACTCAAATAT +
Preference number: 4 (lower is better)
Translates to: EQEAKKLKMARLSKITEAWSFIL*AERLKY
Trigger: ATATTTGAGTCTTTCTGCTCAAAGAATGAAGCTCCA...AGCCTCAGTTATTTTAGACAATCTCGCCATCTTTAATTTCTTAGCTTCCTGTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR TCA 90 bp GTTTCTATTACAAGATCCTATAATGCTAGGACTTCTACACAGCTTAGAACAATGTTCCCATTCTTTATATaGGGTAAATGCAAACCAGGG +
Preference number: 4 (lower is better)
Translates to: VSITRSYNARTSTQLRTMFPFFI*GKCKPG
Trigger: CCCTGGTTTGCATTTACCTCATATAAAGAATGGGAA...CATTGTTCTAAGCTGTGTAGAAGTCCTAGCATTATAGGATCTTGTAATAGAAAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR GCA 90 bp AAGATGAAAGAGGAATGGACTGATGTTTCTATTACAAGATCCTATAATGCTAGGCAGATCCATGTTACATaGAACAGTTGTCGTGATTCT +
Preference number: 4 (lower is better)
Translates to: KMKEEWTDVSITRSYNARQIHVT*NSCRDS
Trigger: AGAATCACGACAACTGTTGCATGTAACATGGATCTG...CCTAGCATTATAGGATCTTGTAATAGAAACATCAGTCCATTCCTCTTTCATCTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
CDS-3UTR GCA 90 bp GAAGCTAAGAAATTAAAGATGGCGAGATTGTCTAAAATAACTGAGGCTGAACTGAATAATCAACAATCCTaGCCATCTTTTCTCGGAAGA +
Preference number: 4 (lower is better)
Translates to: EAKKLKMARLSKITEAELNNQQS*PSFLGR
Trigger: TCTTCCGAGAAAAGATGGGCAGGATTGTTGATTATT...CAGTTCAGCCTCAGTTATTTTAGACAATCTCGCCATCTTTAATTTCTTAGCTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR CCA 90 bp GAATGGACTGATGTTTCTATTACAAGATCCTATAATGCTAGGACTTCTACACAGCCTGTTGAAGACCTATaGCATGCAAGAAATTTAACA +
Preference number: 4 (lower is better)
Translates to: EWTDVSITRSYNARTSTQPVEDL*HARNLT
Trigger: TGTTAAATTTCTTGCATGCCATAGGTCTTCAACAGG...CTGTGTAGAAGTCCTAGCATTATAGGATCTTGTAATAGAAACATCAGTCCATTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
CDS-3UTR TCA 90 bp AAGATGAAAGAGGAATGGACTGATGTTTCTATTACAAGATCCTATAATGCTAGGAATAAGCATCATTCCTaGTCATTAGAGCAAAGGGAT +
Preference number: 4 (lower is better)
Translates to: KMKEEWTDVSITRSYNARNKHHS*SLEQRD
Trigger: ATCCCTTTGCTCTAATGATCAGGAATGATGCTTATT...CCTAGCATTATAGGATCTTGTAATAGAAACATCAGTCCATTCCTCTTTCATCTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS CCA 90 bp CCTCAGCCCTGTCCCCTCGTATGTGGACACGCAGCCACCCTCAGATaGAGTGGCTCTCTGGGGAAGAATGGAGCTGCTAAACCTGTCTTG +
Preference number: 5 (lower is better)
Translates to: PQPCPLVCGHAATLR*SGSLGKNGAAKPVL
Trigger: CAAGACAGGTTTAGCAGCTCCATTCTTCCCCAGAGAGCCACTCCATCTGAGGGTGGCTGCGTGTCCACATACGAGGGGACAGGGCTGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518525.5
CDS CCA 90 bp ATGTTGAGAAGCTGCTCACACCAAGGGGCTGAAGTAGGAATCACCTaGCAGCCACTCCCAGAGCCCCTGGAACTCTGGCCCAAGGCTCTC +
Preference number: 5 (lower is better)
Translates to: MLRSCSHQGAEVGIT*QPLPEPLELWPKAL
Trigger: GAGAGCCTTGGGCCAGAGTTCCAGGGGCTCTGGGAGTGGCTGCCAGGTGATTCCTACTTCAGCCCCTTGGTGTGAGCAGCTTCTCAACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519196.5
CDS TCA 90 bp AAGTATCTGGCACCCAGAGGAACTCCACGAGGCGGGCATCCAGAGTaGAGCTCTTGTTGCCTTCAAACACCAGCCGCTGGTCCATCCAGC +
Preference number: 5 (lower is better)
Translates to: KYLAPRGTPRGGHPE*SSCCLQTPAAGPSS
Trigger: GCTGGATGGACCAGCGGCTGGTGTTTGAAGGCAACAAGAGCTTCACTCTGGATGCCCGCCTCGTGGAGTTCCTCTGGGTGCCAGATACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
ENST00000519598.1
ENST00000521481.5
ENST00000522868.5
CDS CCA 90 bp GACTTCATGGAGGAAGGACTTCTTGGACTCCACAATGTAAGTATCTaGCACCCAGAGGAACTCCACGAGGCGGGCATCCAGAGTGAAGCT +
Preference number: 5 (lower is better)
Translates to: DFMEEGLLGLHNVSI*HPEELHEAGIQSEA
Trigger: AGCTTCACTCTGGATGCCCGCCTCGTGGAGTTCCTCTGGGTGCCAGATACTTACATTGTGGAGTCCAAGAAGTCCTTCCTCCATGAAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
ENST00000519598.1
ENST00000521481.5
ENST00000522868.5
CDS CCA 90 bp AGCAGTTGGTGTTGGGAAGAGAAGTGCGGGACCCGATCATCAGTGTaGTCATTGATAACACGGTCGTCACTCCAATGCAGGTTCTTGCAG +
Preference number: 5 (lower is better)
Translates to: SSWCWEEKCGTRSSV*SLITRSSLQCRFLQ
Trigger: CTGCAAGAACCTGCATTGGAGTGACGACCGTGTTATCAATGACCACACTGATGATCGGGTCCCGCACTTCTCTTCCCAACACCAACTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519598.1
CDS-3UTR CAA 90 bp GCAGCTAGAAAATGGACTCAATTCTGCAAGCCTTCATGGCAACAGCCCATATTACATCTCTGGCTGGATTaGGAGAGGGCAGCTCACCCG +
Preference number: 5 (lower is better)
Translates to: AARKWTQFCKPSWQQPILHLWLD*ERAAHP
Trigger: CGGGTGAGCTGCCCTCTCCAAATCCAGCCAGAGATG...TAATATGGGCTGTTGCCATGAAGGCTTGCAGAATTGAGTCCATTTTCTAGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR CAA 90 bp TTGGGCTCCATGGGAATGTCCTTGATTAAGATGAAAGAGGAATGGACTGATGTTCCAGGCAGGGAAAGCTaGTCACTTCTGCCGACCTCG +
Preference number: 5 (lower is better)
Translates to: LGSMGMSLIKMKEEWTDVPGRES*SLLPTS
Trigger: CGAGGTCGGCAGAAGTGACAAGCTTTCCCTGCCTGG...AACATCAGTCCATTCCTCTTTCATCTTAATCAAGGACATTCCCATGGAGCCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR CAA 90 bp TTAGAGCAAAGGGATGAATGCTCCTCTTGGAATGATACAGGGGATCTGCCACTGAGAGTGAAGCTCTTGTaGCCTTCAAACACCAGCCGC +
Preference number: 5 (lower is better)
Translates to: LEQRDECSSWNDTGDLPLRVKLL*PSNTSR
Trigger: GCGGCTGGTGTTTGAAGGCAACAAGAGCTTCACTCT...CAGTGGCAGATCCCCTGTATCATTCCAAGAGGAGCATTCATCCCTTTGCTCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR CAA 90 bp GCAGCTAGAAAATGGACTCAATTCTGCAAGCCTTCATGGCAACAGCCCATATTATACAGGACCGTGCCATaGGAGAAGAGGCGGATGAGC +
Preference number: 5 (lower is better)
Translates to: AARKWTQFCKPSWQQPILYRTVP*EKRRMS
Trigger: GCTCATCCGCCTCTTCTCCAATGGCACGGTCCTGTA...TAATATGGGCTGTTGCCATGAAGGCTTGCAGAATTGAGTCCATTTTCTAGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR CAA 90 bp TCTACACAGCTTAGAACAATGGTTGGAGCTTCATTCTTTGAGCAGAAAGACTCACCAGGCAGGGAAAGCTaGTCACTTCTGCCGACCTCG +
Preference number: 5 (lower is better)
Translates to: STQLRTMVGASFFEQKDSPGRES*SLLPTS
Trigger: CGAGGTCGGCAGAAGTGACAAGCTTTCCCTGCCTGG...TGAGTCTTTCTGCTCAAAGAATGAAGCTCCAACCATTGTTCTAAGCTGTGTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
CDS-3UTR CAA 90 bp CTTCCAGTATGGGGAATCCATTGTATCTTAGAACCGAGGGATTTGTTTAGATTGCATCTCTGGCTGGATTaGGAGAGGGCAGCTCACCCG +
Preference number: 5 (lower is better)
Translates to: LPVWGIHCILEPRDLFRLHLWLD*ERAAHP
Trigger: CGGGTGAGCTGCCCTCTCCAAATCCAGCCAGAGATG...CAATCTAAACAAATCCCTCGGTTCTAAGATACAATGGATTCCCCATACTGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR CAA 90 bp ATACAACCACATTTCACCTCTTTTCACCAGCACTCCCACCCATTCCCGTTAGAATCACTTTTGGTACTGTaGGCTGAGACTGGCCGAGGA +
Preference number: 5 (lower is better)
Translates to: IQPHFTSFHQHSHPFPLESLLVL*AETGRG
Trigger: TCCTCGGCCAGTCTCAGCCAACAGTACCAAAAGTGA...TTCTAACGGGAATGGGTGGGAGTGCTGGTGAAAAGAGGTGAAATGTGGTTGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR CAA 90 bp TGCACACTTGGCCTAAAATACCATTTACATCATTATCTTGTCCTGTTGAAGACCCCAGGCAGGGAAAGCTaGTCACTTCTGCCGACCTCG +
Preference number: 5 (lower is better)
Translates to: CTLGLKYHLHHYLVLLKTPGRES*SLLPTS
Trigger: CGAGGTCGGCAGAAGTGACAAGCTTTCCCTGCCTGG...GGTCTTCAACAGGACAAGATAATGATGTAAATGGTATTTTAGGCCAAGTGTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
CDS-3UTR CAA 90 bp TGTGGGTGCACACTTGGCCTAAAATACCATTTACATCATTATCTTGTCCTGTTGTACAGGACCGTGCCATaGGAGAAGAGGCGGATGAGC +
Preference number: 5 (lower is better)
Translates to: CGCTLGLKYHLHHYLVLLYRTVP*EKRRMS
Trigger: GCTCATCCGCCTCTTCTCCAATGGCACGGTCCTGTA...CAACAGGACAAGATAATGATGTAAATGGTATTTTAGGCCAAGTGTGCACCCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
CDS-3UTR CAA 90 bp GCTAGGACTTCTACACAGCTTAGAACAATGGTTGGAGCTTCATTCTTTGAGCAGGCCACTGGGAGAGTGTaGCTCAGTGTTAGAGTAGCA +
Preference number: 5 (lower is better)
Translates to: ARTSTQLRTMVGASFFEQATGRV*LSVRVA
Trigger: TGCTACTCTAACACTGAGCAACACTCTCCCAGTGGC...CTGCTCAAAGAATGAAGCTCCAACCATTGTTCTAAGCTGTGTAGAAGTCCTAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS TCA 90 bp GGTAGACACTTTCACCGGATAAGTAGAGTCCTTTCCTACAGGGTCTaGGAAGGCCACTGCAGTCATTTCTTCCCTTCTGTCAGACATAAT +
Preference number: 5 (lower is better)
Translates to: GRHFHRISRVLSYRV*EGHCSHFFPSVRHN
Trigger: ATTATGTCTGACAGAAGGGAAGAAATGACTGCAGTGGCCTTCTCAGACCCTGTAGGAAAGGACTCTACTTATCCGGTGAAAGTGTCTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521481.5
CDS CCA 90 bp AGGCTGAGATATTTTAACCAAATTATCTGTTTCCCTGACTATTCCTaGACTGCAGCCGCATCTCATTGCTGCCCTTCTCCCCAACCCAAA +
Preference number: 5 (lower is better)
Translates to: RLRYFNQIICFPDYS*TAAASHCCPSPQPK
Trigger: TTTGGGTTGGGGAGAAGGGCAGCAATGAGATGCGGCTGCAGTCCAGGAATAGTCAGGGAAACAGATAATTTGGTTAAAATATCTCAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519196.5
CDS-3UTR CAA 90 bp TGGTTTATTTCTGACAGGAAAGGTAAAGCCGTGCATTTATTAGAACAGGAAGCTTACAGGACCGTGCCATaGGAGAAGAGGCGGATGAGC +
Preference number: 5 (lower is better)
Translates to: WFISDRKGKAVHLLEQEAYRTVP*EKRRMS
Trigger: GCTCATCCGCCTCTTCTCCAATGGCACGGTCCTGTA...AGCTTCCTGTTCTAATAAATGCACGGCTTTACCTTTCCTGTCAGAAATAAACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR CAA 90 bp AATGCTGGCAAAGCTGATCTTCCGTTTAAAGCTGGAGATGGAGCTGTTGATGATTCACTTGTAGCACCATaGGATGTGGGTGCACACTTG +
Preference number: 5 (lower is better)
Translates to: NAGKADLPFKAGDGAVDDSLVAP*DVGAHL
Trigger: CAAGTGTGCACCCACATCCAATGGTGCTACAAGTGA...ATCATCAACAGCTCCATCTCCAGCTTTAAACGGAAGATCAGCTTTGCCAGCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519385.5
CDS-3UTR CAA 90 bp TTGGGCTCCATGGGAATGTCCTTGATTAAGATGAAAGAGGAATGGACTGATGTTGCCACTGGGAGAGTGTaGCTCAGTGTTAGAGTAGCA +
Preference number: 5 (lower is better)
Translates to: LGSMGMSLIKMKEEWTDVATGRV*LSVRVA
Trigger: TGCTACTCTAACACTGAGCAACACTCTCCCAGTGGC...AACATCAGTCCATTCCTCTTTCATCTTAATCAAGGACATTCCCATGGAGCCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR CAA 90 bp TGTGGGTGCACACTTGGCCTAAAATACCATTTACATCATTATCTTGTCCTGTTGCCCCAATGCAGGTTCTaGCAGGGACTGAATCGAGAG +
Preference number: 5 (lower is better)
Translates to: CGCTLGLKYHLHHYLVLLPQCRF*QGLNRE
Trigger: CTCTCGATTCAGTCCCTGCAAGAACCTGCATTGGGG...CAACAGGACAAGATAATGATGTAAATGGTATTTTAGGCCAAGTGTGCACCCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519385.5
CDS CCA 90 bp CGGCTAGAAAGCATATCCCCTTTAAACACACAGAGAGGGACTACTTaGGTAGAGTACAAAGGAACAGCGCTTACCATGTTACTCTCTGAA +
Preference number: 5 (lower is better)
Translates to: RLESISPLNTQRGTT*VEYKGTALTMLLSE
Trigger: TTCAGAGAGTAACATGGTAAGCGCTGTTCCTTTGTACTCTACCCAAGTAGTCCCTCTCTGTGTGTTTAAAGGGGATATGCTTTCTAGCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519137.1
CDS-3UTR CAA 90 bp CAGAAAGACTCAAATATTATTTCAGTCACTTGTAGCACCATTGGATGTGGGTGCAGAGTGAAGCTCTTGTaGCCTTCAAACACCAGCCGC +
Preference number: 5 (lower is better)
Translates to: QKDSNIISVTCSTIGCGCRVKLL*PSNTSR
Trigger: GCGGCTGGTGTTTGAAGGCAACAAGAGCTTCACTCT...GCACCCACATCCAATGGTGCTACAAGTGACTGAAATAATATTTGAGTCTTTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
CDS-3UTR CAA 90 bp CTACACAGCTTAGAACAATGGTTGGAGCTTCATTCTTTGAGCAGAAAGACTCAACTCCAATGCAGGTTCTaGCAGGGACTGAATCGAGAG +
Preference number: 5 (lower is better)
Translates to: LHSLEQWLELHSLSRKTQLQCRF*QGLNRE
Trigger: CTCTCGATTCAGTCCCTGCAAGAACCTGCATTGGAG...TTGAGTCTTTCTGCTCAAAGAATGAAGCTCCAACCATTGTTCTAAGCTGTGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR CAA 90 bp ACTTCTACACAGCTTAGAACAATGGTTGGAGCTTCATTCTTTGAGCAGAAAGACATGAAGCAGTTGGTGTaGGGAAGAGAAGTGCGGGAC +
Preference number: 5 (lower is better)
Translates to: TSTQLRTMVGASFFEQKDMKQLV*GREVRD
Trigger: GTCCCGCACTTCTCTTCCCAACACCAACTGCTTCAT...GTCTTTCTGCTCAAAGAATGAAGCTCCAACCATTGTTCTAAGCTGTGTAGAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR CAA 90 bp AAGATGAAAGAGGAATGGACTGATGTTTCTATTACAAGATCCTATAATGCTAGGAAGGGGAGGGATTCCTaGGAGGCTTGGCCTTGCACC +
Preference number: 5 (lower is better)
Translates to: KMKEEWTDVSITRSYNARKGRDS*EAWPCT
Trigger: GGTGCAAGGCCAAGCCTCCAAGGAATCCCTCCCCTT...CCTAGCATTATAGGATCTTGTAATAGAAACATCAGTCCATTCCTCTTTCATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518525.5
CDS TCA 90 bp TACTTGGGTAGAGTACAAAGGAACAGCGCTTACCATGTTACTCTCTaGAATGCTAGAGATACTTGCAATGTCCAGAGTCAGCGCTATCTG +
Preference number: 5 (lower is better)
Translates to: YLGRVQRNSAYHVTL*NARDTCNVQSQRYL
Trigger: CAGATAGCGCTGACTCTGGACATTGCAAGTATCTCTAGCATTTCAGAGAGTAACATGGTAAGCGCTGTTCCTTTGTACTCTACCCAAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519137.1
CDS-3UTR CAA 90 bp ACCACATTTCACCTCTTTTCACCAGCACTCCCACCCATTCCCGTTAGAAATATTTTGGGCCTGAGAAATTaGTTATATCCTGCTGTGAGG +
Preference number: 5 (lower is better)
Translates to: TTFHLFSPALPPIPVRNILGLRN*LYPAVR
Trigger: CCTCACAGCAGGATATAACAAATTTCTCAGGCCCAA...AATATTTCTAACGGGAATGGGTGGGAGTGCTGGTGAAAAGAGGTGAAATGTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR CAA 90 bp CCACATTTCACCTCTTTTCACCAGCACTCCCACCCATTCCCGTTAGAAATATTTTTGGGCCTGAGAAATTaGTTATATCCTGCTGTGAGG +
Preference number: 5 (lower is better)
Translates to: PHFTSFHQHSHPFPLEIFLGLRN*LYPAVR
Trigger: CCTCACAGCAGGATATAACAAATTTCTCAGGCCCAA...AAATATTTCTAACGGGAATGGGTGGGAGTGCTGGTGAAAAGAGGTGAAATGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR CAA 90 bp CAGCTCACCCGCAACCTGAACATAGGTTCTGTAACGTATCTCATTGTTACTCAGGGTTCTCCACCAAAATaGGGCCTGAGAAATTTGTTA +
Preference number: 5 (lower is better)
Translates to: QLTRNLNIGSVTYLIVTQGSPPK*GLRNLL
Trigger: TAACAAATTTCTCAGGCCCAATTTTGGTGGAGAACC...CTGAGTAACAATGAGATACGTTACAGAACCTATGTTCAGGTTGCGGGTGAGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR CAA 90 bp TGCACACTTGGCCTAAAATACCATTTACATCATTATCTTGTCCTGTTGAAGACCAGAGTGAAGCTCTTGTaGCCTTCAAACACCAGCCGC +
Preference number: 5 (lower is better)
Translates to: CTLGLKYHLHHYLVLLKTRVKLL*PSNTSR
Trigger: GCGGCTGGTGTTTGAAGGCAACAAGAGCTTCACTCT...GGTCTTCAACAGGACAAGATAATGATGTAAATGGTATTTTAGGCCAAGTGTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
CDS-3UTR CAA 90 bp CAGAAAGACTCAAATATTATTTCAGTCACTTGTAGCACCATTGGATGTGGGTGCTCCAGAGTGAAGCTCTaGTTGCCTTCAAACACCAGC +
Preference number: 5 (lower is better)
Translates to: QKDSNIISVTCSTIGCGCSRVKL*LPSNTS
Trigger: GCTGGTGTTTGAAGGCAACAAGAGCTTCACTCTGGA...GCACCCACATCCAATGGTGCTACAAGTGACTGAAATAATATTTGAGTCTTTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
CDS-3UTR CAA 90 bp ACTTCTACACAGCTTAGAACAATGGTTGGAGCTTCATTCTTTGAGCAGAAAGACCTTTCCAGCTGCAACTaGCATGTCTGTGTGTCCATG +
Preference number: 5 (lower is better)
Translates to: TSTQLRTMVGASFFEQKDLSSCN*HVCVSM
Trigger: CATGGACACACAGACATGCAAGTTGCAGCTGGAAAG...GTCTTTCTGCTCAAAGAATGAAGCTCCAACCATTGTTCTAAGCTGTGTAGAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
CDS-3UTR CAA 90 bp ACCATTGGATGTGGGTGCACACTTGGCCTAAAATACCATTTACATCATTATCTTCTCCAATGCAGGTTCTaGCAGGGACTGAATCGAGAG +
Preference number: 5 (lower is better)
Translates to: TIGCGCTLGLKYHLHHYLLQCRF*QGLNRE
Trigger: CTCTCGATTCAGTCCCTGCAAGAACCTGCATTGGAG...AAGATAATGATGTAAATGGTATTTTAGGCCAAGTGTGCACCCACATCCAATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR CAA 90 bp CTACACAGCTTAGAACAATGGTTGGAGCTTCATTCTTTGAGCAGAAAGACTCAAGCCTTGATGAAGCAGTaGGTGTTGGGAAGAGAAGTG +
Preference number: 5 (lower is better)
Translates to: LHSLEQWLELHSLSRKTQALMKQ*VLGREV
Trigger: CACTTCTCTTCCCAACACCAACTGCTTCATCAAGGC...TTGAGTCTTTCTGCTCAAAGAATGAAGCTCCAACCATTGTTCTAAGCTGTGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR CAA 90 bp TGGCCTAAAATACCATTTACATCATTATCTTGTCCTGTTGAAGACCTATGGCATGCTGCTAAACCTGTCTaGGCTCCAGCCATGCAGGTA +
Preference number: 5 (lower is better)
Translates to: WPKIPFTSLSCPVEDLWHAAKPV*APAMQV
Trigger: TACCTGCATGGCTGGAGCCAAGACAGGTTTAGCAGC...ATGCCATAGGTCTTCAACAGGACAAGATAATGATGTAAATGGTATTTTAGGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518525.5
CDS-3UTR CAA 90 bp ACGTTGTCGCTGGAAATTTCAATGCTGGCAAAGCTGATCTTCCGTTTAAAGCTGCTTCTACTTCCTTTGTaGTCCCCAATGCAGGTTCTT +
Preference number: 5 (lower is better)
Translates to: TLSLEISMLAKLIFRLKLLLLPL*SPMQVL
Trigger: AAGAACCTGCATTGGGGACAACAAAGGAAGTAGAAG...CAGCTTTAAACGGAAGATCAGCTTTGCCAGCATTGAAATTTCCAGCGACAACGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519385.5
CDS-3UTR CAA 90 bp TGCACACTTGGCCTAAAATACCATTTACATCATTATCTTGTCCTGTTGAAGACCTCCAGAGTGAAGCTCTaGTTGCCTTCAAACACCAGC +
Preference number: 5 (lower is better)
Translates to: CTLGLKYHLHHYLVLLKTSRVKL*LPSNTS
Trigger: GCTGGTGTTTGAAGGCAACAAGAGCTTCACTCTGGA...GGTCTTCAACAGGACAAGATAATGATGTAAATGGTATTTTAGGCCAAGTGTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
CDS-3UTR CAA 90 bp CAGAAAGACTCAAATATTATTTCAGTCACTTGTAGCACCATTGGATGTGGGTGCTCATCAGTGTGGTCATaGATAACACGGTCGTCACTC +
Preference number: 5 (lower is better)
Translates to: QKDSNIISVTCSTIGCGCSSVWS*ITRSSL
Trigger: GAGTGACGACCGTGTTATCAATGACCACACTGATGA...GCACCCACATCCAATGGTGCTACAAGTGACTGAAATAATATTTGAGTCTTTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR CAA 90 bp TATAATGCTAGGACTTCTACACAGCTTAGAACAATGGTTGGAGCTTCATTCTTTATGAAGCAGTTGGTGTaGGGAAGAGAAGTGCGGGAC +
Preference number: 5 (lower is better)
Translates to: YNARTSTQLRTMVGASFFMKQLV*GREVRD
Trigger: GTCCCGCACTTCTCTTCCCAACACCAACTGCTTCAT...AAAGAATGAAGCTCCAACCATTGTTCTAAGCTGTGTAGAAGTCCTAGCATTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR CAA 90 bp TGTGGGTGCACACTTGGCCTAAAATACCATTTACATCATTATCTTGTCCTGTTGTACACATCGATGGCCTaGATGAAGCAGTTGGTGTTG +
Preference number: 5 (lower is better)
Translates to: CGCTLGLKYHLHHYLVLLYTSMA*MKQLVL
Trigger: CAACACCAACTGCTTCATCAAGGCCATCGATGTGTA...CAACAGGACAAGATAATGATGTAAATGGTATTTTAGGCCAAGTGTGCACCCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR CAA 90 bp CCACATTTCACCTCTTTTCACCAGCACTCCCACCCATTCCCGTTAGAAATATTTTGTCGCTGGTTTTCATaGTCAAGTCACTGTAGTCAA +
Preference number: 5 (lower is better)
Translates to: PHFTSFHQHSHPFPLEIFCRWFS*SSHCSQ
Trigger: TTGACTACAGTGACTTGACAATGAAAACCAGCGACA...AAATATTTCTAACGGGAATGGGTGGGAGTGCTGGTGAAAAGAGGTGAAATGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR CAA 90 bp CAGCTCACCCGCAACCTGAACATAGGTTCTGTAACGTATCTCATTGTTACTCAGAAGACAAACTTGAACTaGTCGCTGGTTTTCATTGTC +
Preference number: 5 (lower is better)
Translates to: QLTRNLNIGSVTYLIVTQKTNLN*SLVFIV
Trigger: GACAATGAAAACCAGCGACAAGTTCAAGTTTGTCTT...CTGAGTAACAATGAGATACGTTACAGAACCTATGTTCAGGTTGCGGGTGAGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR CAA 90 bp TTAGAGCAAAGGGATGAATGCTCCTCTTGGAATGATACAGGGGATCTGCCACTGTTAGAACCGAGGGATTaGTTTAGATTGTTGATCTAC +
Preference number: 5 (lower is better)
Translates to: LEQRDECSSWNDTGDLPLLEPRD*FRLLIY
Trigger: GTAGATCAACAATCTAAACAAATCCCTCGGTTCTAA...CAGTGGCAGATCCCCTGTATCATTCCAAGAGGAGCATTCATCCCTTTGCTCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR CAA 90 bp CTACACAGCTTAGAACAATGGTTGGAGCTTCATTCTTTGAGCAGAAAGACTCAACTTAAGCTAAGCCACTaGTTCCTGGGTCAAGCAGTT +
Preference number: 5 (lower is better)
Translates to: LHSLEQWLELHSLSRKTQLKLSH*FLGQAV
Trigger: AACTGCTTGACCCAGGAACAAGTGGCTTAGCTTAAG...TTGAGTCTTTCTGCTCAAAGAATGAAGCTCCAACCATTGTTCTAAGCTGTGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR CAA 90 bp GAAGCTAAGAAATTAAAGATGGCGAGATTGTCTAAAATAACTGAGGCTGAACTGTCACTTTTGGTACTGTaGGCTGAGACTGGCCGAGGA +
Preference number: 5 (lower is better)
Translates to: EAKKLKMARLSKITEAELSLLVL*AETGRG
Trigger: TCCTCGGCCAGTCTCAGCCAACAGTACCAAAAGTGA...CAGTTCAGCCTCAGTTATTTTAGACAATCTCGCCATCTTTAATTTCTTAGCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR CAA 90 bp ATTACAAGATCCTATAATGCTAGGACTTCTACACAGCTTAGAACAATGGTTGGATCCAGAGTGAAGCTCTaGTTGCCTTCAAACACCAGC +
Preference number: 5 (lower is better)
Translates to: ITRSYNARTSTQLRTMVGSRVKL*LPSNTS
Trigger: GCTGGTGTTTGAAGGCAACAAGAGCTTCACTCTGGA...TCCAACCATTGTTCTAAGCTGTGTAGAAGTCCTAGCATTATAGGATCTTGTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
CDS-3UTR CAA 90 bp GCTTCATTCTTTGAGCAGAAAGACTCAAATATTATTTCAGTCACTTGTAGCACCCTTTCCAGCTGCAACTaGCATGTCTGTGTGTCCATG +
Preference number: 5 (lower is better)
Translates to: ASFFEQKDSNIISVTCSTLSSCN*HVCVSM
Trigger: CATGGACACACAGACATGCAAGTTGCAGCTGGAAAG...GGTGCTACAAGTGACTGAAATAATATTTGAGTCTTTCTGCTCAAAGAATGAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
CDS-3UTR CAA 90 bp GGACTGATGTTTCTATTACAAGATCCTATAATGCTAGGACTTCTACACAGCTTACTTTCCAGCTGCAACTaGCATGTCTGTGTGTCCATG +
Preference number: 5 (lower is better)
Translates to: GLMFLLQDPIMLGLLHSLLSSCN*HVCVSM
Trigger: CATGGACACACAGACATGCAAGTTGCAGCTGGAAAG...TAAGCTGTGTAGAAGTCCTAGCATTATAGGATCTTGTAATAGAAACATCAGTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
CDS-3UTR CAA 90 bp CATTGGATGTGGGTGCACACTTGGCCTAAAATACCATTTACATCATTATCTTGTCTTCTACTTCCTTTGTaGTCCCCCTATCTTTGGCTG +
Preference number: 5 (lower is better)
Translates to: HWMWVHTWPKIPFTSLSCLLLPL*SPYLWL
Trigger: CAGCCAAAGATAGGGGGACAACAAAGGAAGTAGAAG...ACAAGATAATGATGTAAATGGTATTTTAGGCCAAGTGTGCACCCACATCCAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR CAA 90 bp TCAACAATCCTGCCCATCTTTTCTCGGAAGACAAACTTGAACTTGTCGCTGGTTCTGGAGATGGAGCTGTaGATGATATTAGTAATACTG +
Preference number: 5 (lower is better)
Translates to: STILPIFSRKTNLNLSLVLEMEL*MILVIL
Trigger: CAGTATTACTAATATCATCAACAGCTCCATCTCCAG...AACCAGCGACAAGTTCAAGTTTGTCTTCCGAGAAAAGATGGGCAGGATTGTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519385.5
CDS-3UTR CAA 90 bp CCCATCTTTTCTCGGAAGACAAACTTGAACTTGTCGCTGGTTTTCATTGTCAAGTGTCGCTGGTTTTCATaGTCAAGTCACTGTAGTCAA +
Preference number: 5 (lower is better)
Translates to: PIFSRKTNLNLSLVFIVKCRWFS*SSHCSQ
Trigger: TTGACTACAGTGACTTGACAATGAAAACCAGCGACA...CTTGACAATGAAAACCAGCGACAAGTTCAAGTTTGTCTTCCGAGAAAAGATGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000519385.5
CDS-3UTR CAA 90 bp CTACACAGCTTAGAACAATGGTTGGAGCTTCATTCTTTGAGCAGAAAGACTCAATCTCGGAAGACAAACTaGAACTTGTCGCTGGTTTTC +
Preference number: 5 (lower is better)
Translates to: LHSLEQWLELHSLSRKTQSRKTN*NLSLVF
Trigger: GAAAACCAGCGACAAGTTCAAGTTTGTCTTCCGAGA...TTGAGTCTTTCTGCTCAAAGAATGAAGCTCCAACCATTGTTCTAAGCTGTGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
CDS-3UTR CAA 90 bp GCTAGGACTTCTACACAGCTTAGAACAATGGTTGGAGCTTCATTCTTTGAGCAGTCCATGGGAATGTCCTaGATTAAGATGAAAGAGGAA +
Preference number: 5 (lower is better)
Translates to: ARTSTQLRTMVGASFFEQSMGMS*IKMKEE
Trigger: TTCCTCTTTCATCTTAATCAAGGACATTCCCATGGA...CTGCTCAAAGAATGAAGCTCCAACCATTGTTCTAAGCTGTGTAGAAGTCCTAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR CAA 90 bp TCTACACAGCTTAGAACAATGGTTGGAGCTTCATTCTTTGAGCAGAAAGACTCAAGTACATTTGTAATCTaGGGCTCCATGGGAATGTCC +
Preference number: 5 (lower is better)
Translates to: STQLRTMVGASFFEQKDSSTFVI*GSMGMS
Trigger: GGACATTCCCATGGAGCCCAAGATTACAAATGTACT...TGAGTCTTTCTGCTCAAAGAATGAAGCTCCAACCATTGTTCTAAGCTGTGTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR CAA 90 bp CTACACAGCTTAGAACAATGGTTGGAGCTTCATTCTTTGAGCAGAAAGACTCAAAGTATGGGGAATCCATaGTATCTTAGAACCGAGGGA +
Preference number: 5 (lower is better)
Translates to: LHSLEQWLELHSLSRKTQSMGNP*YLRTEG
Trigger: TCCCTCGGTTCTAAGATACAATGGATTCCCCATACT...TTGAGTCTTTCTGCTCAAAGAATGAAGCTCCAACCATTGTTCTAAGCTGTGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS GCA 90 bp TTGGATTCTTCATGGATGCTTGCTCCTGTGGTTGTGATTTTATGCTaGATACAGATAACATATTTTCTGCCTATCTTTGGCTGCCATCTG +
Preference number: 5 (lower is better)
Translates to: LDSSWMLAPVVVILC*IQITYFLPIFGCHL
Trigger: CAGATGGCAGCCAAAGATAGGCAGAAAATATGTTATCTGTATGCAGCATAAAATCACAACCACAGGAGCAAGCATCCATGAAGAATCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519598.1
CDS-3UTR CAA 90 bp ACTTCTACACAGCTTAGAACAATGGTTGGAGCTTCATTCTTTGAGCAGAAAGACGGTTCTCCACCAAAATaGGGCCTGAGAAATTTGTTA +
Preference number: 5 (lower is better)
Translates to: TSTQLRTMVGASFFEQKDGSPPK*GLRNLL
Trigger: TAACAAATTTCTCAGGCCCAATTTTGGTGGAGAACC...GTCTTTCTGCTCAAAGAATGAAGCTCCAACCATTGTTCTAAGCTGTGTAGAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
CDS-3UTR CAA 90 bp TCTTTGAGCAGAAAGACTCAAATATTATTTCAGTCACTTGTAGCACCATTGGATGCCTTGATGAAGCAGTaGGTGTTGGGAAGAGAAGTG +
Preference number: 5 (lower is better)
Translates to: SLSRKTQILFQSLVAPLDALMKQ*VLGREV
Trigger: CACTTCTCTTCCCAACACCAACTGCTTCATCAAGGC...ATCCAATGGTGCTACAAGTGACTGAAATAATATTTGAGTCTTTCTGCTCAAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR CAA 90 bp GAAGCTAAGAAATTAAAGATGGCGAGATTGTCTAAAATAACTGAGGCTGAACTGTACACATCGATGGCCTaGATGAAGCAGTTGGTGTTG +
Preference number: 5 (lower is better)
Translates to: EAKKLKMARLSKITEAELYTSMA*MKQLVL
Trigger: CAACACCAACTGCTTCATCAAGGCCATCGATGTGTA...CAGTTCAGCCTCAGTTATTTTAGACAATCTCGCCATCTTTAATTTCTTAGCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR CAA 90 bp TGGTTTATTTCTGACAGGAAAGGTAAAGCCGTGCATTTATTAGAACAGGAAGCTTCTCGGAAGACAAACTaGAACTTGTCGCTGGTTTTC +
Preference number: 5 (lower is better)
Translates to: WFISDRKGKAVHLLEQEASRKTN*NLSLVF
Trigger: GAAAACCAGCGACAAGTTCAAGTTTGTCTTCCGAGA...AGCTTCCTGTTCTAATAAATGCACGGCTTTACCTTTCCTGTCAGAAATAAACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR CAA 90 bp AAGATGAAAGAGGAATGGACTGATGTTTCTATTACAAGATCCTATAATGCTAGGTCACTTGTAGCACCATaGGATGTGGGTGCACACTTG +
Preference number: 5 (lower is better)
Translates to: KMKEEWTDVSITRSYNARSLVAP*DVGAHL
Trigger: CAAGTGTGCACCCACATCCAATGGTGCTACAAGTGA...CCTAGCATTATAGGATCTTGTAATAGAAACATCAGTCCATTCCTCTTTCATCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
CDS-3UTR CAA 90 bp CACCATTGGATGTGGGTGCACACTTGGCCTAAAATACCATTTACATCATTATCTAGCTTAGAACAATGGTaGGAGCTTCATTCTTTGAGC +
Preference number: 5 (lower is better)
Translates to: HHWMWVHTWPKIPFTSLSSLEQW*ELHSLS
Trigger: GCTCAAAGAATGAAGCTCCAACCATTGTTCTAAGCT...AGATAATGATGTAAATGGTATTTTAGGCCAAGTGTGCACCCACATCCAATGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
CDS-3UTR CAA 90 bp TCTACACAGCTTAGAACAATGGTTGGAGCTTCATTCTTTGAGCAGAAAGACTCAAGCTTAGAACAATGGTaGGAGCTTCATTCTTTGAGC +
Preference number: 5 (lower is better)
Translates to: STQLRTMVGASFFEQKDSSLEQW*ELHSLS
Trigger: GCTCAAAGAATGAAGCTCCAACCATTGTTCTAAGCT...TGAGTCTTTCTGCTCAAAGAATGAAGCTCCAACCATTGTTCTAAGCTGTGTAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
CDS-3UTR CAA 90 bp ACCATTGGATGTGGGTGCACACTTGGCCTAAAATACCATTTACATCATTATCTTAGTATGGGGAATCCATaGTATCTTAGAACCGAGGGA +
Preference number: 5 (lower is better)
Translates to: TIGCGCTLGLKYHLHHYLSMGNP*YLRTEG
Trigger: TCCCTCGGTTCTAAGATACAATGGATTCCCCATACT...AAGATAATGATGTAAATGGTATTTTAGGCCAAGTGTGCACCCACATCCAATGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR CAA 90 bp TTGGGCTCCATGGGAATGTCCTTGATTAAGATGAAAGAGGAATGGACTGATGTTCCTGGGTCAAGCAGTTaGTTTTCTAATAAGCATCAT +
Preference number: 5 (lower is better)
Translates to: LGSMGMSLIKMKEEWTDVPGSSS*FSNKHH
Trigger: ATGATGCTTATTAGAAAACAAACTGCTTGACCCAGG...AACATCAGTCCATTCCTCTTTCATCTTAATCAAGGACATTCCCATGGAGCCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR CAA 90 bp GTTTCTATTACAAGATCCTATAATGCTAGGACTTCTACACAGCTTAGAACAATGTCATCAGTGTGGTCATaGATAACACGGTCGTCACTC +
Preference number: 5 (lower is better)
Translates to: VSITRSYNARTSTQLRTMSSVWS*ITRSSL
Trigger: GAGTGACGACCGTGTTATCAATGACCACACTGATGA...CATTGTTCTAAGCTGTGTAGAAGTCCTAGCATTATAGGATCTTGTAATAGAAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR CAA 90 bp TCTTTGAGCAGAAAGACTCAAATATTATTTCAGTCACTTGTAGCACCATTGGATCTTCTACTTCCTTTGTaGTCCCCCTATCTTTGGCTG +
Preference number: 5 (lower is better)
Translates to: SLSRKTQILFQSLVAPLDLLLPL*SPYLWL
Trigger: CAGCCAAAGATAGGGGGACAACAAAGGAAGTAGAAG...ATCCAATGGTGCTACAAGTGACTGAAATAATATTTGAGTCTTTCTGCTCAAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR CAA 90 bp TGTGGGTGCACACTTGGCCTAAAATACCATTTACATCATTATCTTGTCCTGTTGAAGACAAACTTGAACTaGTCGCTGGTTTTCATTGTC +
Preference number: 5 (lower is better)
Translates to: CGCTLGLKYHLHHYLVLLKTNLN*SLVFIV
Trigger: GACAATGAAAACCAGCGACAAGTTCAAGTTTGTCTT...CAACAGGACAAGATAATGATGTAAATGGTATTTTAGGCCAAGTGTGCACCCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
CDS-3UTR CAA 90 bp CATTGGATGTGGGTGCACACTTGGCCTAAAATACCATTTACATCATTATCTTGTCATTATCTTGTCCTGTaGAAGACCTATGGCATGCAA +
Preference number: 5 (lower is better)
Translates to: HWMWVHTWPKIPFTSLSCHYLVL*KTYGMQ
Trigger: TTGCATGCCATAGGTCTTCAACAGGACAAGATAATG...ACAAGATAATGATGTAAATGGTATTTTAGGCCAAGTGTGCACCCACATCCAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
CDS-3UTR CAA 90 bp GAATGGACTGATGTTTCTATTACAAGATCCTATAATGCTAGGACTTCTACACAGAGTACATTTGTAATCTaGGGCTCCATGGGAATGTCC +
Preference number: 5 (lower is better)
Translates to: EWTDVSITRSYNARTSTQSTFVI*GSMGMS
Trigger: GGACATTCCCATGGAGCCCAAGATTACAAATGTACT...CTGTGTAGAAGTCCTAGCATTATAGGATCTTGTAATAGAAACATCAGTCCATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR CAA 90 bp CTACACAGCTTAGAACAATGGTTGGAGCTTCATTCTTTGAGCAGAAAGACTCAAAGGACTTATTGGAAATaGGGGATAATTCTGTTGTGG +
Preference number: 5 (lower is better)
Translates to: LHSLEQWLELHSLSRKTQRTYWK*GIILLW
Trigger: CCACAACAGAATTATCCCCAATTTCCAATAAGTCCT...TTGAGTCTTTCTGCTCAAAGAATGAAGCTCCAACCATTGTTCTAAGCTGTGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR CAA 90 bp CTTCCAGTATGGGGAATCCATTGTATCTTAGAACCGAGGGATTTGTTTAGATTGCCTGGGTCAAGCAGTTaGTTTTCTAATAAGCATCAT +
Preference number: 5 (lower is better)
Translates to: LPVWGIHCILEPRDLFRLPGSSS*FSNKHH
Trigger: ATGATGCTTATTAGAAAACAAACTGCTTGACCCAGG...CAATCTAAACAAATCCCTCGGTTCTAAGATACAATGGATTCCCCATACTGGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR CAA 90 bp TCTTTGAGCAGAAAGACTCAAATATTATTTCAGTCACTTGTAGCACCATTGGATCTTAAGCTAAGCCACTaGTTCCTGGGTCAAGCAGTT +
Preference number: 5 (lower is better)
Translates to: SLSRKTQILFQSLVAPLDLKLSH*FLGQAV
Trigger: AACTGCTTGACCCAGGAACAAGTGGCTTAGCTTAAG...ATCCAATGGTGCTACAAGTGACTGAAATAATATTTGAGTCTTTCTGCTCAAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS GCA 90 bp ATATTGGATTCTTCATGGATGCTTGCTCCTGTGGTTGTGATTTTATaGTGCATACAGATAACATATTTTCTGCCTATCTTTGGCTGCCAT +
Preference number: 5 (lower is better)
Translates to: ILDSSWMLAPVVVIL*CIQITYFLPIFGCH
Trigger: ATGGCAGCCAAAGATAGGCAGAAAATATGTTATCTGTATGCAGCATAAAATCACAACCACAGGAGCAAGCATCCATGAAGAATCCAATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519598.1
CDS-3UTR CAA 90 bp GCTTCATTCTTTGAGCAGAAAGACTCAAATATTATTTCAGTCACTTGTAGCACCTGTCGCTGGTTTTCATaGTCAAGTCACTGTAGTCAA +
Preference number: 5 (lower is better)
Translates to: ASFFEQKDSNIISVTCSTCRWFS*SSHCSQ
Trigger: TTGACTACAGTGACTTGACAATGAAAACCAGCGACA...GGTGCTACAAGTGACTGAAATAATATTTGAGTCTTTCTGCTCAAAGAATGAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
CDS-3UTR CAA 90 bp AAATACCATTTACATCATTATCTTGTCCTGTTGAAGACCTATGGCATGCAAGAATCTCGGAAGACAAACTaGAACTTGTCGCTGGTTTTC +
Preference number: 5 (lower is better)
Translates to: KYHLHHYLVLLKTYGMQESRKTN*NLSLVF
Trigger: GAAAACCAGCGACAAGTTCAAGTTTGTCTTCCGAGA...TTCTTGCATGCCATAGGTCTTCAACAGGACAAGATAATGATGTAAATGGTATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
CDS-3UTR CAA 90 bp CTTCCAGTATGGGGAATCCATTGTATCTTAGAACCGAGGGATTTGTTTAGATTGTTGGAGCTTCATTCTTaGAGCAGAAAGACTCAAATA +
Preference number: 5 (lower is better)
Translates to: LPVWGIHCILEPRDLFRLLELHS*SRKTQI
Trigger: TATTTGAGTCTTTCTGCTCAAAGAATGAAGCTCCAA...CAATCTAAACAAATCCCTCGGTTCTAAGATACAATGGATTCCCCATACTGGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR CAA 90 bp ACCATTGGATGTGGGTGCACACTTGGCCTAAAATACCATTTACATCATTATCTTAGGACTTATTGGAAATaGGGGATAATTCTGTTGTGG +
Preference number: 5 (lower is better)
Translates to: TIGCGCTLGLKYHLHHYLRTYWK*GIILLW
Trigger: CCACAACAGAATTATCCCCAATTTCCAATAAGTCCT...AAGATAATGATGTAAATGGTATTTTAGGCCAAGTGTGCACCCACATCCAATGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR CAA 90 bp TCTACACAGCTTAGAACAATGGTTGGAGCTTCATTCTTTGAGCAGAAAGACTCATTAGAACCGAGGGATTaGTTTAGATTGTTGATCTAC +
Preference number: 5 (lower is better)
Translates to: STQLRTMVGASFFEQKDSLEPRD*FRLLIY
Trigger: GTAGATCAACAATCTAAACAAATCCCTCGGTTCTAA...TGAGTCTTTCTGCTCAAAGAATGAAGCTCCAACCATTGTTCTAAGCTGTGTAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR CAA 90 bp CTACACAGCTTAGAACAATGGTTGGAGCTTCATTCTTTGAGCAGAAAGACTCAATTAAAGATGGCGAGATaGTCTAAAATAACTGAGGCT +
Preference number: 5 (lower is better)
Translates to: LHSLEQWLELHSLSRKTQLKMAR*SKITEA
Trigger: AGCCTCAGTTATTTTAGACAATCTCGCCATCTTTAA...TTGAGTCTTTCTGCTCAAAGAATGAAGCTCCAACCATTGTTCTAAGCTGTGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR CAA 90 bp CAGAAAGACTCAAATATTATTTCAGTCACTTGTAGCACCATTGGATGTGGGTGCTTAAAGATGGCGAGATaGTCTAAAATAACTGAGGCT +
Preference number: 5 (lower is better)
Translates to: QKDSNIISVTCSTIGCGCLKMAR*SKITEA
Trigger: AGCCTCAGTTATTTTAGACAATCTCGCCATCTTTAA...GCACCCACATCCAATGGTGCTACAAGTGACTGAAATAATATTTGAGTCTTTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR CAA 90 bp GGACTGATGTTTCTATTACAAGATCCTATAATGCTAGGACTTCTACACAGCTTACTGGAGATGGAGCTGTaGATGATATTAGTAATACTG +
Preference number: 5 (lower is better)
Translates to: GLMFLLQDPIMLGLLHSLLEMEL*MILVIL
Trigger: CAGTATTACTAATATCATCAACAGCTCCATCTCCAG...TAAGCTGTGTAGAAGTCCTAGCATTATAGGATCTTGTAATAGAAACATCAGTCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
CDS-3UTR CAA 90 bp GTTTCTATTACAAGATCCTATAATGCTAGGACTTCTACACAGCTTAGAACAATGCATTATCTTGTCCTGTaGAAGACCTATGGCATGCAA +
Preference number: 5 (lower is better)
Translates to: VSITRSYNARTSTQLRTMHYLVL*KTYGMQ
Trigger: TTGCATGCCATAGGTCTTCAACAGGACAAGATAATG...CATTGTTCTAAGCTGTGTAGAAGTCCTAGCATTATAGGATCTTGTAATAGAAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
CDS-3UTR CAA 90 bp AAGATGAAAGAGGAATGGACTGATGTTTCTATTACAAGATCCTATAATGCTAGGCATTATCTTGTCCTGTaGAAGACCTATGGCATGCAA +
Preference number: 5 (lower is better)
Translates to: KMKEEWTDVSITRSYNARHYLVL*KTYGMQ
Trigger: TTGCATGCCATAGGTCTTCAACAGGACAAGATAATG...CCTAGCATTATAGGATCTTGTAATAGAAACATCAGTCCATTCCTCTTTCATCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
CDS-3UTR CAA 90 bp AAGATGAAAGAGGAATGGACTGATGTTTCTATTACAAGATCCTATAATGCTAGGAGCTTAGAACAATGGTaGGAGCTTCATTCTTTGAGC +
Preference number: 5 (lower is better)
Translates to: KMKEEWTDVSITRSYNARSLEQW*ELHSLS
Trigger: GCTCAAAGAATGAAGCTCCAACCATTGTTCTAAGCT...CCTAGCATTATAGGATCTTGTAATAGAAACATCAGTCCATTCCTCTTTCATCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
CDS-3UTR CAA 90 bp GGACTGATGTTTCTATTACAAGATCCTATAATGCTAGGACTTCTACACAGCTTATCCATGGGAATGTCCTaGATTAAGATGAAAGAGGAA +
Preference number: 5 (lower is better)
Translates to: GLMFLLQDPIMLGLLHSLSMGMS*IKMKEE
Trigger: TTCCTCTTTCATCTTAATCAAGGACATTCCCATGGA...TAAGCTGTGTAGAAGTCCTAGCATTATAGGATCTTGTAATAGAAACATCAGTCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR CAA 90 bp TGGCCTAAAATACCATTTACATCATTATCTTGTCCTGTTGAAGACCTATGGCATACTCAAAAATCACTTTaGGTACTGTTGGCTGAGACT +
Preference number: 5 (lower is better)
Translates to: WPKIPFTSLSCPVEDLWHTQKSL*VLLAET
Trigger: AGTCTCAGCCAACAGTACCAAAAGTGATTTTTGAGT...ATGCCATAGGTCTTCAACAGGACAAGATAATGATGTAAATGGTATTTTAGGCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR CAA 90 bp AAATACCATTTACATCATTATCTTGTCCTGTTGAAGACCTATGGCATGCAAGAACTGGAGATGGAGCTGTaGATGATATTAGTAATACTG +
Preference number: 5 (lower is better)
Translates to: KYHLHHYLVLLKTYGMQELEMEL*MILVIL
Trigger: CAGTATTACTAATATCATCAACAGCTCCATCTCCAG...TTCTTGCATGCCATAGGTCTTCAACAGGACAAGATAATGATGTAAATGGTATTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
CDS-3UTR CAA 90 bp TCTTTGAGCAGAAAGACTCAAATATTATTTCAGTCACTTGTAGCACCATTGGATAAGACAAACTTGAACTaGTCGCTGGTTTTCATTGTC +
Preference number: 5 (lower is better)
Translates to: SLSRKTQILFQSLVAPLDKTNLN*SLVFIV
Trigger: GACAATGAAAACCAGCGACAAGTTCAAGTTTGTCTT...ATCCAATGGTGCTACAAGTGACTGAAATAATATTTGAGTCTTTCTGCTCAAAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
CDS-3UTR CAA 90 bp GAACAGGAAGCTAAGAAATTAAAGATGGCGAGATTGTCTAAAATAACTGAGGCTTTGGAGCTTCATTCTTaGAGCAGAAAGACTCAAATA +
Preference number: 5 (lower is better)
Translates to: EQEAKKLKMARLSKITEALELHS*SRKTQI
Trigger: TATTTGAGTCTTTCTGCTCAAAGAATGAAGCTCCAA...AGCCTCAGTTATTTTAGACAATCTCGCCATCTTTAATTTCTTAGCTTCCTGTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265294.9
ENST00000518525.5
CDS-3UTR CAA 90 bp GCTTCATTCTTTGAGCAGAAAGACTCAAATATTATTTCAGTCACTTGTAGCACCTTGGAGCTTCATTCTTaGAGCAGAAAGACTCAAATA +
Preference number: 5 (lower is better)
Translates to: ASFFEQKDSNIISVTCSTLELHS*SRKTQI
Trigger: TATTTGAGTCTTTCTGCTCAAAGAATGAAGCTCCAA...GGTGCTACAAGTGACTGAAATAATATTTGAGTCTTTCTGCTCAAAGAATGAAGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
CDS CAA 90 bp GGCACCCAGAGGAACTCCACGAGGCGGGCATCCAGAGTGAAGCTCTaGTTGCCTTCAAACACCAGCCGCTGGTCCATCCAGCGCTGTCGG +
Preference number: 6 (lower is better)
Translates to: GTQRNSTRRASRVKL*LPSNTSRWSIQRCR
Trigger: CCGACAGCGCTGGATGGACCAGCGGCTGGTGTTTGAAGGCAACAAGAGCTTCACTCTGGATGCCCGCCTCGTGGAGTTCCTCTGGGTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
ENST00000519598.1
ENST00000521481.5
ENST00000522868.5
CDS CCA 72 bp CCTACAGGCAGGACTTCCAGGCAAGGCACGGTCTTCTaGGTCCCCAGGGTTCTCCTCATCCTCAGCCCTGTC +
Preference number: 6 (lower is better)
Translates to: PTGRTSRQGTVF*VPRVLLILSPV
Trigger: GACAGGGCTGAGGATGAGGAGAACCCTGGGGACCCAGAAGACCGTGCCTTGCCTGGAAGTCCTGCCTGTAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265294.9
ENST00000518122.5
ENST00000518525.5
ENST00000519385.5
ENST00000519598.1
CDS CCA 72 bp AGCTGCTCACACCAAGGGGCTGAAGTAGGAATCACCTaGCAGCCACTCCCAGAGCCCCTGGAACTCTGGCCC +
Preference number: 6 (lower is better)
Translates to: SCSHQGAEVGIT*QPLPEPLELWP
Trigger: GGGCCAGAGTTCCAGGGGCTCTGGGAGTGGCTGCCAGGTGATTCCTACTTCAGCCCCTTGGTGTGAGCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519196.5
CDS CAA 72 bp CTTGGCTCCAGCCATGCAGGTAAGGGGAGGGATTCCTaGGAGGCTTGGCCTTGCACCCTGAGGGAGCTGGGA +
Preference number: 6 (lower is better)
Translates to: LGSSHAGKGRDS*EAWPCTLRELG
Trigger: TCCCAGCTCCCTCAGGGTGCAAGGCCAAGCCTCCAAGGAATCCCTCCCCTTACCTGCATGGCTGGAGCCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518122.5
ENST00000518525.5
CDS CAA 90 bp ACCCAGAGGAACTCCACGAGGCGGGCATCCAGAGTGAAGCTCTTGTaGCCTTCAAACACCAGCCGCTGGTCCATCCAGCGCTGTCGGAGG +
Preference number: 6 (lower is better)
Translates to: TQRNSTRRASRVKLL*PSNTSRWSIQRCRR
Trigger: CCTCCGACAGCGCTGGATGGACCAGCGGCTGGTGTTTGAAGGCAACAAGAGCTTCACTCTGGATGCCCGCCTCGTGGAGTTCCTCTGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
ENST00000519598.1
ENST00000521481.5
ENST00000522868.5
CDS CCA 72 bp GGGTTCTCCTCATCCTCAGCCCTGTCCCCTCGTATGTaGACACGCAGCCACCCTCAGATGGAGTGGCTCTCT +
Preference number: 6 (lower is better)
Translates to: GFSSSSALSPRM*TRSHPQMEWLS
Trigger: AGAGAGCCACTCCATCTGAGGGTGGCTGCGTGTCCACATACGAGGGGACAGGGCTGAGGATGAGGAGAACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518525.5
CDS CCA 72 bp GGGTTCTCCTCATCCTCAGCCCTGTCCCCTCGTATGTaGACACGCAGCCACCCTCAGATGGAGTGGCTCTTC +
Preference number: 6 (lower is better)
Translates to: GFSSSSALSPRM*TRSHPQMEWLF
Trigger: GAAGAGCCACTCCATCTGAGGGTGGCTGCGTGTCCACATACGAGGGGACAGGGCTGAGGATGAGGAGAACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518122.5
CDS TCA 72 bp GCACCCAGAGGAACTCCACGAGGCGGGCATCCAGAGTaGAGCTCTTGTTGCCTTCAAACACCAGCCGCTGGT +
Preference number: 6 (lower is better)
Translates to: APRGTPRGGHPE*SSCCLQTPAAG
Trigger: ACCAGCGGCTGGTGTTTGAAGGCAACAAGAGCTTCACTCTGGATGCCCGCCTCGTGGAGTTCCTCTGGGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
ENST00000519598.1
ENST00000521481.5
ENST00000522868.5
CDS CCA 72 bp GGGGCTGAAGTAGGAATCACCGCTTCTCTACGCTGCTaGGCCTGTCTGTCTTTCAGCAGGTCCTGCCCTGTG +
Preference number: 6 (lower is better)
Translates to: GAEVGITASLRC*ACLSFSRSCPV
Trigger: CACAGGGCAGGACCTGCTGAAAGACAGACAGGCCCAGCAGCGTAGAGAAGCGGTGATTCCTACTTCAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522868.5
CDS CAA 72 bp AACTCCACGAGGCGGGCATCCAGAGTGAAGCTCTTGTaGCCTTCAAACACCAGCCGCTGGTCCATCCAGCGC +
Preference number: 6 (lower is better)
Translates to: NSTRRASRVKLL*PSNTSRWSIQR
Trigger: GCGCTGGATGGACCAGCGGCTGGTGTTTGAAGGCAACAAGAGCTTCACTCTGGATGCCCGCCTCGTGGAGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
ENST00000519598.1
ENST00000521481.5
ENST00000522868.5
CDS GCA 72 bp CCTGACTATTCCTGGACTGCAGCCGCATCTCATTGCTaGCCTTCTCCCCAACCCAAAGCCTCCTTCGCGTCT +
Preference number: 6 (lower is better)
Translates to: PDYSWTAAASHC*PSPQPKASFAS
Trigger: AGACGCGAAGGAGGCTTTGGGTTGGGGAGAAGGGCAGCAATGAGATGCGGCTGCAGTCCAGGAATAGTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519196.5
CDS GCA 72 bp TTCCCTGACTATTCCTGGACTGCAGCCGCATCTCATTaGTGCCCTTCTCCCCAACCCAAAGCCTCCTTCGCG +
Preference number: 6 (lower is better)
Translates to: FPDYSWTAAASH*CPSPQPKASFA
Trigger: CGCGAAGGAGGCTTTGGGTTGGGGAGAAGGGCAGCAATGAGATGCGGCTGCAGTCCAGGAATAGTCAGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519196.5
CDS GCA 72 bp GCTGGGCCTGTCTGTCTTTCAGCAGGTCCTGCCCTGTaGCATGGCATGTTCATTCCCTGTCCCTCACTCCTT +
Preference number: 6 (lower is better)
Translates to: AGPVCLSAGPAL*HGMFIPCPSLL
Trigger: AAGGAGTGAGGGACAGGGAATGAACATGCCATGGCACAGGGCAGGACCTGCTGAAAGACAGACAGGCCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522868.5
CDS GCA 72 bp CAAGGGGCTGAAGTAGGAATCACCGCTTCTCTACGCTaGTGGGCCTGTCTGTCTTTCAGCAGGTCCTGCCCT +
Preference number: 6 (lower is better)
Translates to: QGAEVGITASLR*WACLSFSRSCP
Trigger: AGGGCAGGACCTGCTGAAAGACAGACAGGCCCAGCAGCGTAGAGAAGCGGTGATTCCTACTTCAGCCCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522868.5
CDS CAA 72 bp AGGAACTCCACGAGGCGGGCATCCAGAGTGAAGCTCTaGTTGCCTTCAAACACCAGCCGCTGGTCCATCCAG +
Preference number: 6 (lower is better)
Translates to: RNSTRRASRVKL*LPSNTSRWSIQ
Trigger: CTGGATGGACCAGCGGCTGGTGTTTGAAGGCAACAAGAGCTTCACTCTGGATGCCCGCCTCGTGGAGTTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
ENST00000519598.1
ENST00000521481.5
ENST00000522868.5
CDS CCA 72 bp TGTCCCCTCGTATGTGGACACGCAGCCACCCTCAGATaGAGTGGCTCTCTGGGGAAGAATGGAGCTGCTAAA +
Preference number: 6 (lower is better)
Translates to: CPLVCGHAATLR*SGSLGKNGAAK
Trigger: TTTAGCAGCTCCATTCTTCCCCAGAGAGCCACTCCATCTGAGGGTGGCTGCGTGTCCACATACGAGGGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518525.5
CDS CCA 72 bp CCAGCCGCTGGTCCATCCAGCGCTGTCGGAGGTATATaGTGGCTGTGTAGTCCATGTTACTCTCTGAAATGC +
Preference number: 6 (lower is better)
Translates to: PAAGPSSAVGGI*WLCSPCYSLKC
Trigger: GCATTTCAGAGAGTAACATGGACTACACAGCCACCATATACCTCCGACAGCGCTGGATGGACCAGCGGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
ENST00000519598.1
ENST00000521481.5
ENST00000522868.5
CDS CAA 72 bp GTTGTCGTGATTCTGAGGGCATACAGGACCGTGCCATaGGAGAAGAGGCGGATGAGCCTGTTTCCCACAGTG +
Preference number: 6 (lower is better)
Translates to: VVVILRAYRTVP*EKRRMSLFPTV
Trigger: CACTGTGGGAAACAGGCTCATCCGCCTCTTCTCCAATGGCACGGTCCTGTATGCCCTCAGAATCACGACAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
ENST00000519598.1
ENST00000521481.5
ENST00000522868.5
CDS CCA 72 bp TGTTGGGAAGAGAAGTGCGGGACCCGATCATCAGTGTaGTCATTGATAACACGGTCGTCACTCCAATGCAGG +
Preference number: 6 (lower is better)
Translates to: CWEEKCGTRSSV*SLITRSSLQCR
Trigger: CCTGCATTGGAGTGACGACCGTGTTATCAATGACCACACTGATGATCGGGTCCCGCACTTCTCTTCCCAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519598.1
CDS CAA 90 bp CCAAACACAAAGCTAAAGCAGATCCCCAGGTACACATCGATGGCCTaGATGAAGCAGTTGGTGTTGGGAAGAGAAGTGCGGGACCCGATC +
Preference number: 6 (lower is better)
Translates to: PNTKLKQIPRYTSMA*MKQLVLGREVRDPI
Trigger: GATCGGGTCCCGCACTTCTCTTCCCAACACCAACTGCTTCATCAAGGCCATCGATGTGTACCTGGGGATCTGCTTTAGCTTTGTGTTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519598.1
CDS CAA 72 bp GAAGAGAAGTGCGGGACCCGATCATCAGTGTGGTCATaGATAACACGGTCGTCACTCCAATGCAGGTTCTTG +
Preference number: 6 (lower is better)
Translates to: EEKCGTRSSVWS*ITRSSLQCRFL
Trigger: CAAGAACCTGCATTGGAGTGACGACCGTGTTATCAATGACCACACTGATGATCGGGTCCCGCACTTCTCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519598.1
CDS CAA 90 bp AGCGCTATCTGTACGGGTTCTCCACCAAAATTGGGCCTGAGAAATTaGTTATATCCTGCTGTGAGGTTCTCAAAGCCAGGCAGGGAAAGC +
Preference number: 6 (lower is better)
Translates to: SAICTGSPPKLGLRN*LYPAVRFSKPGRES
Trigger: GCTTTCCCTGCCTGGCTTTGAGAACCTCACAGCAGGATATAACAAATTTCTCAGGCCCAATTTTGGTGGAGAACCCGTACAGATAGCGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519137.1
ENST00000519385.5
ENST00000519598.1
ENST00000521009.5
ENST00000521481.5
ENST00000522868.5
CDS TCA 72 bp TTTCACCGGATAAGTAGAGTCCTTTCCTACAGGGTCTaGGAAGGCCACTGCAGTCATTTCTTCCCTTCTGTC +
Preference number: 6 (lower is better)
Translates to: FHRISRVLSYRV*EGHCSHFFPSV
Trigger: GACAGAAGGGAAGAAATGACTGCAGTGGCCTTCTCAGACCCTGTAGGAAAGGACTCTACTTATCCGGTGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521481.5
CDS CAA 72 bp TGTACGGGTTCTCCACCAAAATTGGGCCTGAGAAATTaGTTATATCCTGCTGTGAGGTTCTCAAAGCCAGGC +
Preference number: 6 (lower is better)
Translates to: CTGSPPKLGLRN*LYPAVRFSKPG
Trigger: GCCTGGCTTTGAGAACCTCACAGCAGGATATAACAAATTTCTCAGGCCCAATTTTGGTGGAGAACCCGTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519137.1
ENST00000519385.5
ENST00000519598.1
ENST00000521009.5
ENST00000521481.5
ENST00000522868.5
CDS CCA 72 bp TATTTTAACCAAATTATCTGTTTCCCTGACTATTCCTaGACTGCAGCCGCATCTCATTGCTGCCCTTCTCCC +
Preference number: 6 (lower is better)
Translates to: YFNQIICFPDYS*TAAASHCCPSP
Trigger: GGGAGAAGGGCAGCAATGAGATGCGGCTGCAGTCCAGGAATAGTCAGGGAAACAGATAATTTGGTTAAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519196.5
CDS CAA 72 bp AAGCATATCCCCTTTAAACACACAGAGAGGGACTACTaGGGTAGAGTACAAAGGAACAGCGCTTACCATGTT +
Preference number: 6 (lower is better)
Translates to: KHIPFKHTERDY*GRVQRNSAYHV
Trigger: AACATGGTAAGCGCTGTTCCTTTGTACTCTACCCAAGTAGTCCCTCTCTGTGTGTTTAAAGGGGATATGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519137.1
CDS TCA 72 bp AGAGTACAAAGGAACAGCGCTTACCATGTTACTCTCTaGAATGCTAGAGATACTTGCAATGTCCAGAGTCAG +
Preference number: 6 (lower is better)
Translates to: RVQRNSAYHVTL*NARDTCNVQSQ
Trigger: CTGACTCTGGACATTGCAAGTATCTCTAGCATTTCAGAGAGTAACATGGTAAGCGCTGTTCCTTTGTACTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519137.1
CDS CAA 90 bp ATGCTGGCAAAGCTGATCTTCCGTTTAAAGCTGGAGATGGAGCTGTaGATGATATTAGTAATACTGACTTCTTCTACTTCCTTTGTTGTC +
Preference number: 6 (lower is better)
Translates to: MLAKLIFRLKLEMEL*MILVILTSSTSFVV
Trigger: GACAACAAAGGAAGTAGAAGAAGTCAGTATTACTAATATCATCAACAGCTCCATCTCCAGCTTTAAACGGAAGATCAGCTTTGCCAGCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
CDS TCA 72 bp TTAGTTATCCCCACCTGCCCAGTTCCCTTATTAGGCTaGGATATTTTAACCAAATTATCTGTTTCCCTGACT +
Preference number: 6 (lower is better)
Translates to: LVIPTCPVPLLG*DILTKLSVSLT
Trigger: AGTCAGGGAAACAGATAATTTGGTTAAAATATCTCAGCCTAATAAGGGAACTGGGCAGGTGGGGATAACTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519196.5
CDS GCA 72 bp TCATGGATGCTTGCTCCTGTGGTTGTGATTTTATGCTaGATACAGATAACATATTTTCTGCCTATCTTTGGC +
Preference number: 6 (lower is better)
Translates to: SWMLAPVVVILC*IQITYFLPIFG
Trigger: GCCAAAGATAGGCAGAAAATATGTTATCTGTATGCAGCATAAAATCACAACCACAGGAGCAAGCATCCATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519598.1
CDS CAA 72 bp AAGCTGATCTTCCGTTTAAAGCTGGAGATGGAGCTGTaGATGATATTAGTAATACTGACTTCTTCTACTTCC +
Preference number: 6 (lower is better)
Translates to: KLIFRLKLEMEL*MILVILTSSTS
Trigger: GGAAGTAGAAGAAGTCAGTATTACTAATATCATCAACAGCTCCATCTCCAGCTTTAAACGGAAGATCAGCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265294.9
ENST00000518525.5
ENST00000519385.5
CDS GCA 72 bp TCTTCATGGATGCTTGCTCCTGTGGTTGTGATTTTATaGTGCATACAGATAACATATTTTCTGCCTATCTTT +
Preference number: 6 (lower is better)
Translates to: SSWMLAPVVVIL*CIQITYFLPIF
Trigger: AAAGATAGGCAGAAAATATGTTATCTGTATGCAGCATAAAATCACAACCACAGGAGCAAGCATCCATGAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519598.1