RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GABRA2 (Homo sapiens)

Ensembl gene IDs: ENSG00000151834

Ensembl transcript IDs: ENST00000356504.5, ENST00000381620.9, ENST00000506961.5, ENST00000507460.1, ENST00000509716.2, ENST00000510233.5, ENST00000510861.5, ENST00000513005.5, ENST00000514090.5, ENST00000514193.5, ENST00000514236.1, ENST00000515082.5, ENST00000540012.5, ENST00000630416.2

Found 792 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGTGGGCAGAGGGACATTGTGTCACATCTGGGCAGAAGCTTTAAATaGCAGTGTACACCTAGCCACATCTTTCCCCTGGACACAGTGGCT +
Preference number: 1 (lower is better)
Translates to: CGQRDIVSHLGRSFK*QCTPSHIFPLDTVA
Trigger: AGCCACTGTGTCCAGGGGAAAGATGTGGCTAGGTGTACACTGTCATTTAAAGCTTCTGCCCAGATGTGACACAATGTCCCTCTGCCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507460.1
3UTR CCA 90 bp GTCTTGGTTCTCTGCTCAGATTCTCACATGGCTGAAATCAAGGTATaGGTGTGCTGTGCTCCTTTCTGGAGCCTCTGGGGAAGAATCAGC +
Preference number: 1 (lower is better)
Translates to: VLVLCSDSHMAEIKV*VCCAPFWSLWGRIS
Trigger: GCTGATTCTTCCCCAGAGGCTCCAGAAAGGAGCACAGCACACCCATACCTTGATTTCAGCCATGTGAGAATCTGAGCAGAGAACCAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507460.1
3UTR TCA 90 bp TCCAGCATGCTATGTCTTGGTTCTCTGCTCAGATTCTCACATGGCTaGAATCAAGGTATGGGTGTGCTGTGCTCCTTTCTGGAGCCTCTG +
Preference number: 1 (lower is better)
Translates to: SSMLCLGSLLRFSHG*NQGMGVLCSFLEPL
Trigger: CAGAGGCTCCAGAAAGGAGCACAGCACACCCATACCTTGATTTCAGCCATGTGAGAATCTGAGCAGAGAACCAAGACATAGCATGCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507460.1
3UTR CCA 90 bp GAAGTCCAGCATGCTATGTCTTGGTTCTCTGCTCAGATTCTCACATaGCTGAAATCAAGGTATGGGTGTGCTGTGCTCCTTTCTGGAGCC +
Preference number: 1 (lower is better)
Translates to: EVQHAMSWFSAQILT*LKSRYGCAVLLSGA
Trigger: GGCTCCAGAAAGGAGCACAGCACACCCATACCTTGATTTCAGCCATGTGAGAATCTGAGCAGAGAACCAAGACATAGCATGCTGGACTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507460.1
3UTR TCA 90 bp TGGCGTGGTTGCACTCTTGGAGATGGTGGAGAGAACTGGATCTTTTaGAAGATTCGGGGCATAATTGGCAACAGCCACTGCATAAGCGTT +
Preference number: 1 (lower is better)
Translates to: WRGCTLGDGGENWIF*KIRGIIGNSHCISV
Trigger: AACGCTTATGCAGTGGCTGTTGCCAATTATGCCCCGAATCTTTCAAAAGATCCAGTTCTCTCCACCATCTCCAAGAGTGCAACCACGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000510233.5
ENST00000513005.5
ENST00000630416.2
3UTR CCA 90 bp TTTCTGGCTTCTTGTTGGGTTCTGGCGTGGTTGCACTCTTGGAGATaGTGGAGAGAACTGGATCTTTTGAAAGATTCGGGGCATAATTGG +
Preference number: 1 (lower is better)
Translates to: FLASCWVLAWLHSWR*WRELDLLKDSGHNW
Trigger: CCAATTATGCCCCGAATCTTTCAAAAGATCCAGTTCTCTCCACCATCTCCAAGAGTGCAACCACGCCAGAACCCAACAAGAAGCCAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000510233.5
ENST00000513005.5
ENST00000630416.2
3UTR CCA 90 bp TTGCTTCAGCTGGCTTGTTTTCTGGCTTCTTGTTGGGTTCTGGCGTaGTTGCACTCTTGGAGATGGTGGAGAGAACTGGATCTTTTGAAA +
Preference number: 1 (lower is better)
Translates to: LLQLACFLASCWVLA*LHSWRWWRELDLLK
Trigger: TTTCAAAAGATCCAGTTCTCTCCACCATCTCCAAGAGTGCAACCACGCCAGAACCCAACAAGAAGCCAGAAAACAAGCCAGCTGAAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000510233.5
ENST00000513005.5
ENST00000630416.2
3UTR CCA 90 bp TTTCTTTGCTTCAGCTGGCTTGTTTTCTGGCTTCTTGTTGGGTTCTaGCGTGGTTGCACTCTTGGAGATGGTGGAGAGAACTGGATCTTT +
Preference number: 1 (lower is better)
Translates to: FLCFSWLVFWLLVGF*RGCTLGDGGENWIF
Trigger: AAAGATCCAGTTCTCTCCACCATCTCCAAGAGTGCAACCACGCCAGAACCCAACAAGAAGCCAGAAAACAAGCCAGCTGAAGCAAAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000510233.5
ENST00000513005.5
ENST00000630416.2
3UTR CCA 90 bp TCCTTTGAACAATGGACTGTGGGCAGAGGGACATTGTGTCACATCTaGGCAGAAGCTTTAAATGACAGTGTACACCTAGCCACATCTTTC +
Preference number: 1 (lower is better)
Translates to: SFEQWTVGRGTLCHI*AEALNDSVHLATSF
Trigger: GAAAGATGTGGCTAGGTGTACACTGTCATTTAAAGCTTCTGCCCAGATGTGACACAATGTCCCTCTGCCCACAGTCCATTGTTCAAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507460.1
3UTR CCA 90 bp CTGGAACTATGCCTTCACAGCACAAATGGCAAACCTCTTTATTCCTaGGAGCTTTGGAAAAAGGGCATACAGCACTGCCTTCTAACACCA +
Preference number: 1 (lower is better)
Translates to: LELCLHSTNGKPLYS*ELWKKGIQHCLLTP
Trigger: TGGTGTTAGAAGGCAGTGCTGTATGCCCTTTTTCCAAAGCTCCCAGGAATAAAGAGGTTTGCCATTTGTGCTGTGAAGGCATAGTTCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507460.1
3UTR TCA 90 bp AGCAATGTTTTAGGTGGTGGAAGTCCATCAATCCGAAACCCTAAGTaGGGAAGACATAAAAGAGAGCCCATTCCTACATGCCATCCAACC +
Preference number: 1 (lower is better)
Translates to: SNVLGGGSPSIRNPK*GRHKREPIPTCHPT
Trigger: GGTTGGATGGCATGTAGGAATGGGCTCTCTTTTATGTCTTCCTCACTTAGGGTTTCGGATTGATGGACTTCCACCACCTAAAACATTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507460.1
3UTR CCA 90 bp AAGAGAGCCCATTCCTACATGCCATCCAACCTCAGTGGACAAGGTTaGATCGTGAGCAAGATACATGATCGAGAGATAAAACTGGATAGT +
Preference number: 1 (lower is better)
Translates to: KRAHSYMPSNLSGQG*IVSKIHDREIKLDS
Trigger: ACTATCCAGTTTTATCTCTCGATCATGTATCTTGCTCACGATCCAACCTTGTCCACTGAGGTTGGATGGCATGTAGGAATGGGCTCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507460.1
3UTR CCA 90 bp TGCCTTCACAGCACAAATGGCAAACCTCTTTATTCCTGGGAGCTTTaGAAAAAGGGCATACAGCACTGCCTTCTAACACCAAGAAAAGAG +
Preference number: 1 (lower is better)
Translates to: CLHSTNGKPLYSWEL*KKGIQHCLLTPRKE
Trigger: CTCTTTTCTTGGTGTTAGAAGGCAGTGCTGTATGCCCTTTTTCCAAAGCTCCCAGGAATAAAGAGGTTTGCCATTTGTGCTGTGAAGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507460.1
3UTR TCA 90 bp ACTGAAGCCATAGAGCCTTTGTTCATGATCACTGCTCAGATGGTCTaGAAAGCAGTAACAGCAGGGGCTACTGAATTAGTCCATTTCACT +
Preference number: 1 (lower is better)
Translates to: TEAIEPLFMITAQMV*KAVTAGATELVHFT
Trigger: AGTGAAATGGACTAATTCAGTAGCCCCTGCTGTTACTGCTTTTCAGACCATCTGAGCAGTGATCATGAACAAAGGCTCTATGGCTTCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507460.1
3UTR TCA 90 bp TTTGTTGTGGGGTTAGAAGGCAGTGTTGTATGCATTACAGATGACTaGAGCCATAGAGCCTTTGTTCATGATCACTGCTCAGATGGTCTG +
Preference number: 1 (lower is better)
Translates to: FVVGLEGSVVCITDD*SHRAFVHDHCSDGL
Trigger: CAGACCATCTGAGCAGTGATCATGAACAAAGGCTCTATGGCTTCAGTCATCTGTAATGCATACAACACTGCCTTCTAACCCCACAACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507460.1
3UTR GCA 90 bp TTTCATTGGAATGATGACCGGCCATGCCAAAGAAAAGTACTTTGGTaGTCTTCTGGAATCCATGATTATATCATGGCAGGGTTTGTGTCC +
Preference number: 1 (lower is better)
Translates to: FHWNDDRPCQRKVLW*SSGIHDYIMAGFVS
Trigger: GGACACAAACCCTGCCATGATATAATCATGGATTCCAGAAGAGCACCAAAGTACTTTTCTTTGGCATGGCCGGTCATCATTCCAATGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381620.9
3UTR TCA 90 bp GATCACTGCTCAGATGGTCTGAAAAGCAGTAACAGCAGGGGCTACTaGATTAGTCCATTTCACTATATTAAATCCAGGTTCAACCCAATG +
Preference number: 1 (lower is better)
Translates to: DHCSDGLKSSNSRGY*ISPFHYIKSRFNPM
Trigger: CATTGGGTTGAACCTGGATTTAATATAGTGAAATGGACTAATTCAGTAGCCCCTGCTGTTACTGCTTTTCAGACCATCTGAGCAGTGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507460.1
3UTR TCA 90 bp GATTTAATTGTCTCCTTTCCGATTGATTGGCCCAGCAGGTCATATTaGTTTAACCTAGAGCCATCAGGAGCAACCTGTACTGAATCAGAT +
Preference number: 1 (lower is better)
Translates to: DLIVSFPIDWPSRSY*FNLEPSGATCTESD
Trigger: ATCTGATTCAGTACAGGTTGCTCCTGATGGCTCTAGGTTAAATCAATATGACCTGCTGGGCCAATCAATCGGAAAGGAGACAATTAAATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630416.2
3UTR GCA 90 bp CCCTTCATACAAGAAATGTGCTCTCCAGTTCTTCAATCTCCATTATaGTCCACTCATTCCTTTATTTGTTCTGCCCATGGAGAGCATTTG +
Preference number: 1 (lower is better)
Translates to: PFIQEMCSPVLQSPL*STHSFICSAHGEHL
Trigger: CAAATGCTCTCCATGGGCAGAACAAATAAAGGAATGAGTGGAGCATAATGGAGATTGAAGAACTGGAGAGCACATTTCTTGTATGAAGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507460.1
3UTR CCA 90 bp TTCTTTCATTGGAATGATGACCGGCCATGCCAAAGAAAAGTACTTTaGTGCTCTTCTGGAATCCATGATTATATCATGGCAGGGTTTGTG +
Preference number: 1 (lower is better)
Translates to: FFHWNDDRPCQRKVL*CSSGIHDYIMAGFV
Trigger: CACAAACCCTGCCATGATATAATCATGGATTCCAGAAGAGCACCAAAGTACTTTTCTTTGGCATGGCCGGTCATCATTCCAATGAAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381620.9
3UTR GCA 90 bp GTGTCACCAAACAGTTTGTATAATCAGTCACTATGGAAGATGACTTaGACCCTGAGAAATGGGTTCTACTTGCCAAGTGTGGTAGTTATT +
Preference number: 1 (lower is better)
Translates to: VSPNSLYNQSLWKMT*TLRNGFYLPSVVVI
Trigger: AATAACTACCACACTTGGCAAGTAGAACCCATTTCTCAGGGTGCAAGTCATCTTCCATAGTGACTGATTATACAAACTGTTTGGTGACAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507460.1
3UTR CCA 90 bp AAAGAAAAGTACTTTGGTGCTCTTCTGGAATCCATGATTATATCATaGCAGGGTTTGTGTCCCTCAACCAGGAATTCAAAAAGAGCCACA +
Preference number: 1 (lower is better)
Translates to: KEKYFGALLESMIIS*QGLCPSTRNSKRAT
Trigger: TGTGGCTCTTTTTGAATTCCTGGTTGAGGGACACAAACCCTGCCATGATATAATCATGGATTCCAGAAGAGCACCAAAGTACTTTTCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381620.9
3UTR TCA 90 bp GAGCAACCTGTACTGAATCAGATGCATTGTAAGTCCAAATATAAGTaGCCTCTGAAGTTGTATATGCATAGCTGCCAAATTTCAGAGGAC +
Preference number: 1 (lower is better)
Translates to: EQPVLNQMHCKSKYK*PLKLYMHSCQISED
Trigger: GTCCTCTGAAATTTGGCAGCTATGCATATACAACTTCAGAGGTCACTTATATTTGGACTTACAATGCATCTGATTCAGTACAGGTTGCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630416.2
3UTR GCA 90 bp AAACCTCTTTATTCCTGGGAGCTTTGGAAAAAGGGCATACAGCACTaGCTTCTAACACCAAGAAAAGAGAAGGTACATAAAGTTGACTAT +
Preference number: 1 (lower is better)
Translates to: KPLYSWELWKKGIQH*LLTPRKEKVHKVDY
Trigger: ATAGTCAACTTTATGTACCTTCTCTTTTCTTGGTGTTAGAAGGCAGTGCTGTATGCCCTTTTTCCAAAGCTCCCAGGAATAAAGAGGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507460.1
3UTR TCA 90 bp AATGAGATGCACTTAAAATTTCAACTAAATTCAGTGGGTGTGACATaGGTGATTTTAACACCAATTACAGGGCATGGCACAGGAGGTAAA +
Preference number: 1 (lower is better)
Translates to: NEMHLKFQLNSVGVT*VILTPITGHGTGGK
Trigger: TTTACCTCCTGTGCCATGCCCTGTAATTGGTGTTAAAATCACTCATGTCACACCCACTGAATTTAGTTGAAATTTTAAGTGCATCTCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381620.9
3UTR TCA 90 bp AAGAAGAAAGAAACCATCATTTTTAACCAGAACCTTGAAAACAGATaGCTCAGTCCAGTGTTTGGACCATGTGCATCAGAATCAAGAACA +
Preference number: 1 (lower is better)
Translates to: KKKETIIFNQNLENR*LSPVFGPCASESRT
Trigger: TGTTCTTGATTCTGATGCACATGGTCCAAACACTGGACTGAGTCATCTGTTTTCAAGGTTCTGGTTAAAAATGATGGTTTCTTTCTTCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507460.1
3UTR TCA 90 bp GGCCATGAGAAAGCTATATACTTGGACCATATTAGCTTAGCTCCTTaGAGAATTGCTTTCACTGAGTTGTATGTTAATGTAATGCCTTCA +
Preference number: 1 (lower is better)
Translates to: GHEKAIYLDHISLAP*RIAFTELYVNVMPS
Trigger: TGAAGGCATTACATTAACATACAACTCAGTGAAAGCAATTCTTCAAGGAGCTAAGCTAATATGGTCCAAGTATATAGCTTTCTCATGGCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630416.2
3UTR GCA 90 bp ACACTTCAAAGAGTATCTCTTTTTAAATATCTTCAACTGGAACTATaGCTTCACAGCACAAATGGCAAACCTCTTTATTCCTGGGAGCTT +
Preference number: 1 (lower is better)
Translates to: TLQRVSLFKYLQLEL*LHSTNGKPLYSWEL
Trigger: AAGCTCCCAGGAATAAAGAGGTTTGCCATTTGTGCTGTGAAGGCATAGTTCCAGTTGAAGATATTTAAAAAGAGATACTCTTTGAAGTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507460.1
3UTR TCA 90 bp TACTCATTGATACCACCTTTGTTTGATTTGAGGGTGCTTAATTCCTaGTTGATGAGACTCTGGAGAAAGGCTCTTGAGAAAATTATATTG +
Preference number: 1 (lower is better)
Translates to: YSLIPPLFDLRVLNS*LMRLWRKALEKIIL
Trigger: CAATATAATTTTCTCAAGAGCCTTTCTCCAGAGTCTCATCAATCAGGAATTAAGCACCCTCAAATCAAACAAAGGTGGTATCAATGAGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507460.1
3UTR TCA 90 bp TACATTCAAAGCCTCCTCTTAGGCAGATACATAATCTACAGAGTATaGAAGGAAACAGCTGTTATATCAATGCACAAATCTCCCATTAGA +
Preference number: 1 (lower is better)
Translates to: YIQSLLLGRYIIYRV*KETAVISMHKSPIR
Trigger: TCTAATGGGAGATTTGTGCATTGATATAACAGCTGTTTCCTTTCATACTCTGTAGATTATGTATCTGCCTAAGAGGAGGCTTTGAATGTA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515082.5
3UTR CCA 90 bp GGATTACCTCTTGTGAGGGAATTTTTAATGTCAAGGCTGTCTTCTTaGCAAATTCCGTTAATAAGTTGCATTTGTGACCTTGGTTTTATA +
Preference number: 1 (lower is better)
Translates to: GLPLVREFLMSRLSS*QIPLISCICDLGFI
Trigger: TATAAAACCAAGGTCACAAATGCAACTTATTAACGGAATTTGCCAAGAAGACAGCCTTGACATTAAAAATTCCCTCACAAGAGGTAATCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
3UTR CCA 90 bp GTTAAACAGTCCATCCACTTCTCTAAGTACTCTAAAGTCTTTTCTTaGAATAAACTGGGCCATGAGAAAGCTATATACTTGGACCATATT +
Preference number: 1 (lower is better)
Translates to: VKQSIHFSKYSKVFS*NKLGHEKAIYLDHI
Trigger: AATATGGTCCAAGTATATAGCTTTCTCATGGCCCAGTTTATTCCAAGAAAAGACTTTAGAGTACTTAGAGAAGTGGATGGACTGTTTAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630416.2
3UTR CCA 90 bp CAAAACAAACCAAATTTAATGTTGCTATACATCCCAAAGATAACATaGGTCTCAATTCAAGGACTGACCCCTAATACAGGTTCTCTGTTT +
Preference number: 1 (lower is better)
Translates to: QNKPNLMLLYIPKIT*VSIQGLTPNTGSLF
Trigger: AAACAGAGAACCTGTATTAGGGGTCAGTCCTTGAATTGAGACCCATGTTATCTTTGGGATGTATAGCAACATTAAATTTGGTTTGTTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630416.2
3UTR TCA 90 bp ATAACCAGATATTTAACTTTTAGAAGAGCTTACACAAGCCTCCGTTaGGAAACCTGGCATTCAAAGATGTTTCTATTCTATCTCATGAAG +
Preference number: 1 (lower is better)
Translates to: ITRYLTFRRAYTSLR*ETWHSKMFLFYLMK
Trigger: CTTCATGAGATAGAATAGAAACATCTTTGAATGCCAGGTTTCTCAACGGAGGCTTGTGTAAGCTCTTCTAAAAGTTAAATATCTGGTTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381620.9
3UTR-3UTR GCA 90 bp AGCTGGCTTGTTTTCTGGCTTCTTGTTGGGTTCTGGCGTGGTTGCACTCTTGGACCAGTCCATGGCAGTTaGATAAGCCACTTTGGGGAG +
Preference number: 2 (lower is better)
Translates to: SWLVFWLLVGFWRGCTLGPVHGS*ISHFGE
Trigger: CTCCCCAAAGTGGCTTATGCAACTGCCATGGACTGG...TCCAAGAGTGCAACCACGCCAGAACCCAACAAGAAGCCAGAAAACAAGCCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000510233.5
ENST00000513005.5
ENST00000630416.2
3UTR-3UTR CCA 90 bp CAGCTGGCTTGTTTTCTGGCTTCTTGTTGGGTTCTGGCGTGGTTGCACTCTTGGGATTCGGGGCATAATTaGCAACAGCCACTGCATAAG +
Preference number: 2 (lower is better)
Translates to: QLACFLASCWVLAWLHSWDSGHN*QQPLHK
Trigger: CTTATGCAGTGGCTGTTGCCAATTATGCCCCGAATC...CCAAGAGTGCAACCACGCCAGAACCCAACAAGAAGCCAGAAAACAAGCCAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000510233.5
ENST00000513005.5
ENST00000630416.2
3UTR-3UTR CCA 90 bp GGTTCTGGCGTGGTTGCACTCTTGGAGATGGTGGAGAGAACTGGATCTTTTGAATGTTGGGTTCTGGCGTaGTTGCACTCTTGGAGATGG +
Preference number: 2 (lower is better)
Translates to: GSGVVALLEMVERTGSFECWVLA*LHSWRW
Trigger: CCATCTCCAAGAGTGCAACCACGCCAGAACCCAACA...TTCAAAAGATCCAGTTCTCTCCACCATCTCCAAGAGTGCAACCACGCCAGAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000510233.5
ENST00000513005.5
ENST00000630416.2
3UTR-3UTR CCA 90 bp TTGAACAATGGACTGTGGGCAGAGGGACATTGTGTCACATCTGGGCAGAAGCTTGCCACATCTTTCCCCTaGACACAGTGGCTAGCAATG +
Preference number: 2 (lower is better)
Translates to: LNNGLWAEGHCVTSGQKLATSFP*TQWLAM
Trigger: CATTGCTAGCCACTGTGTCCAGGGGAAAGATGTGGC...AAGCTTCTGCCCAGATGTGACACAATGTCCCTCTGCCCACAGTCCATTGTTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507460.1
3UTR CAA 90 bp CTGGCGTGGTTGCACTCTTGGAGATGGTGGAGAGAACTGGATCTTTaGAAAGATTCGGGGCATAATTGGCAACAGCCACTGCATAAGCGT +
Preference number: 2 (lower is better)
Translates to: LAWLHSWRWWRELDL*KDSGHNWQQPLHKR
Trigger: ACGCTTATGCAGTGGCTGTTGCCAATTATGCCCCGAATCTTTCAAAAGATCCAGTTCTCTCCACCATCTCCAAGAGTGCAACCACGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000510233.5
ENST00000513005.5
ENST00000630416.2
3UTR-3UTR GCA 90 bp GCGTGGTTGCACTCTTGGAGATGGTGGAGAGAACTGGATCTTTTGAAAGATTCGCCAGTCCATGGCAGTTaGATAAGCCACTTTGGGGAG +
Preference number: 2 (lower is better)
Translates to: AWLHSWRWWRELDLLKDSPVHGS*ISHFGE
Trigger: CTCCCCAAAGTGGCTTATGCAACTGCCATGGACTGG...CGAATCTTTCAAAAGATCCAGTTCTCTCCACCATCTCCAAGAGTGCAACCACGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000510233.5
ENST00000513005.5
ENST00000630416.2
3UTR-3UTR CCA 90 bp AGCTGGCTTGTTTTCTGGCTTCTTGTTGGGTTCTGGCGTGGTTGCACTCTTGGAGATTCGGGGCATAATTaGCAACAGCCACTGCATAAG +
Preference number: 2 (lower is better)
Translates to: SWLVFWLLVGFWRGCTLGDSGHN*QQPLHK
Trigger: CTTATGCAGTGGCTGTTGCCAATTATGCCCCGAATC...TCCAAGAGTGCAACCACGCCAGAACCCAACAAGAAGCCAGAAAACAAGCCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000510233.5
ENST00000513005.5
ENST00000630416.2
3UTR-3UTR CCA 90 bp GTTGCACTCTTGGAGATGGTGGAGAGAACTGGATCTTTTGAAAGATTCGGGGCAGCGTGGTTGCACTCTTaGAGATGGTGGAGAGAACTG +
Preference number: 2 (lower is better)
Translates to: VALLEMVERTGSFERFGAAWLHS*RWWREL
Trigger: CAGTTCTCTCCACCATCTCCAAGAGTGCAACCACGC...TGCCCCGAATCTTTCAAAAGATCCAGTTCTCTCCACCATCTCCAAGAGTGCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000510233.5
ENST00000513005.5
ENST00000630416.2
3UTR-3UTR CCA 90 bp GCGTGGTTGCACTCTTGGAGATGGTGGAGAGAACTGGATCTTTTGAAAGATTCGCTTCTTGTTGGGTTCTaGCGTGGTTGCACTCTTGGA +
Preference number: 2 (lower is better)
Translates to: AWLHSWRWWRELDLLKDSLLVGF*RGCTLG
Trigger: TCCAAGAGTGCAACCACGCCAGAACCCAACAAGAAG...CGAATCTTTCAAAAGATCCAGTTCTCTCCACCATCTCCAAGAGTGCAACCACGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000510233.5
ENST00000513005.5
ENST00000630416.2
3UTR-3UTR CCA 90 bp TCTGGCGTGGTTGCACTCTTGGAGATGGTGGAGAGAACTGGATCTTTTGAAAGACTTCTTGTTGGGTTCTaGCGTGGTTGCACTCTTGGA +
Preference number: 2 (lower is better)
Translates to: SGVVALLEMVERTGSFERLLVGF*RGCTLG
Trigger: TCCAAGAGTGCAACCACGCCAGAACCCAACAAGAAG...TCTTTCAAAAGATCCAGTTCTCTCCACCATCTCCAAGAGTGCAACCACGCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000510233.5
ENST00000513005.5
ENST00000630416.2
3UTR-3UTR CCA 90 bp GGCGTGGTTGCACTCTTGGAGATGGTGGAGAGAACTGGATCTTTTGAAAGATTCTTTCTGGCTTCTTGTTaGGTTCTGGCGTGGTTGCAC +
Preference number: 2 (lower is better)
Translates to: GVVALLEMVERTGSFERFFLASC*VLAWLH
Trigger: GTGCAACCACGCCAGAACCCAACAAGAAGCCAGAAA...GAATCTTTCAAAAGATCCAGTTCTCTCCACCATCTCCAAGAGTGCAACCACGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000510233.5
ENST00000513005.5
ENST00000630416.2
3UTR CAA 90 bp CTTCAGCTGGCTTGTTTTCTGGCTTCTTGTTGGGTTCTGGCGTGGTaGCACTCTTGGAGATGGTGGAGAGAACTGGATCTTTTGAAAGAT +
Preference number: 2 (lower is better)
Translates to: LQLACFLASCWVLAW*HSWRWWRELDLLKD
Trigger: ATCTTTCAAAAGATCCAGTTCTCTCCACCATCTCCAAGAGTGCAACCACGCCAGAACCCAACAAGAAGCCAGAAAACAAGCCAGCTGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000510233.5
ENST00000513005.5
ENST00000630416.2
3UTR-3UTR GCA 90 bp AGCTGGCTTGTTTTCTGGCTTCTTGTTGGGTTCTGGCGTGGTTGCACTCTTGGACAGTTGTTACTCAGCTaGCAAATTTCAGAGGACATG +
Preference number: 2 (lower is better)
Translates to: SWLVFWLLVGFWRGCTLGQLLLS*QISEDM
Trigger: CATGTCCTCTGAAATTTGGCAGCTGAGTAACAACTG...TCCAAGAGTGCAACCACGCCAGAACCCAACAAGAAGCCAGAAAACAAGCCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513005.5
3UTR-3UTR CCA 90 bp GCGTGGTTGCACTCTTGGAGATGGTGGAGAGAACTGGATCTTTTGAAAGATTCGGATTCGGGGCATAATTaGCAACAGCCACTGCATAAG +
Preference number: 2 (lower is better)
Translates to: AWLHSWRWWRELDLLKDSDSGHN*QQPLHK
Trigger: CTTATGCAGTGGCTGTTGCCAATTATGCCCCGAATC...CGAATCTTTCAAAAGATCCAGTTCTCTCCACCATCTCCAAGAGTGCAACCACGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000510233.5
ENST00000513005.5
ENST00000630416.2
3UTR CAA 90 bp TTGAAAGTTTTCTTTGCTTCAGCTGGCTTGTTTTCTGGCTTCTTGTaGGGTTCTGGCGTGGTTGCACTCTTGGAGATGGTGGAGAGAACT +
Preference number: 2 (lower is better)
Translates to: LKVFFASAGLFSGFL*GSGVVALLEMVERT
Trigger: AGTTCTCTCCACCATCTCCAAGAGTGCAACCACGCCAGAACCCAACAAGAAGCCAGAAAACAAGCCAGCTGAAGCAAAGAAAACTTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000510233.5
ENST00000513005.5
ENST00000630416.2
3UTR-3UTR TCA 90 bp TTGAACAATGGACTGTGGGCAGAGGGACATTGTGTCACATCTGGGCAGAAGCTTATCCGAAACCCTAAGTaGGGAAGACATAAAAGAGAG +
Preference number: 2 (lower is better)
Translates to: LNNGLWAEGHCVTSGQKLIRNPK*GRHKRE
Trigger: CTCTCTTTTATGTCTTCCTCACTTAGGGTTTCGGAT...AAGCTTCTGCCCAGATGTGACACAATGTCCCTCTGCCCACAGTCCATTGTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507460.1
3UTR-3UTR TCA 90 bp GCGTGGTTGCACTCTTGGAGATGGTGGAGAGAACTGGATCTTTTGAAAGATTCGATTGGGCATTCAGCTTaGACTGTAAGCCTCATGGTA +
Preference number: 2 (lower is better)
Translates to: AWLHSWRWWRELDLLKDSIGHSA*TVSLMV
Trigger: TACCATGAGGCTTACAGTTCAAGCTGAATGCCCAAT...CGAATCTTTCAAAAGATCCAGTTCTCTCCACCATCTCCAAGAGTGCAACCACGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000513005.5
ENST00000630416.2
3UTR-3UTR TCA 90 bp GCGTGGTTGCACTCTTGGAGATGGTGGAGAGAACTGGATCTTTTGAAAGATTCGTTCAGAGGACATGAATaGGCATCCATTGGGAAATCC +
Preference number: 2 (lower is better)
Translates to: AWLHSWRWWRELDLLKDSFRGHE*ASIGKS
Trigger: GGATTTCCCAATGGATGCTCATTCATGTCCTCTGAA...CGAATCTTTCAAAAGATCCAGTTCTCTCCACCATCTCCAAGAGTGCAACCACGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000513005.5
ENST00000630416.2
3UTR-3UTR TCA 90 bp TCTGGCGTGGTTGCACTCTTGGAGATGGTGGAGAGAACTGGATCTTTTGAAAGACCCAGCAGGTCATATTaGTTTAACCTAGAGCCATCA +
Preference number: 2 (lower is better)
Translates to: SGVVALLEMVERTGSFERPSRSY*FNLEPS
Trigger: TGATGGCTCTAGGTTAAATCAATATGACCTGCTGGG...TCTTTCAAAAGATCCAGTTCTCTCCACCATCTCCAAGAGTGCAACCACGCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630416.2
3UTR-3UTR GCA 90 bp TTGAACAATGGACTGTGGGCAGAGGGACATTGTGTCACATCTGGGCAGAAGCTTTTTAGGGCCAGAGGCTaGAAACTAATACTCAAGTGT +
Preference number: 2 (lower is better)
Translates to: LNNGLWAEGHCVTSGQKLFRARG*KLILKC
Trigger: ACACTTGAGTATTAGTTTGCAGCCTCTGGCCCTAAA...AAGCTTCTGCCCAGATGTGACACAATGTCCCTCTGCCCACAGTCCATTGTTCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507460.1
3UTR-3UTR CCA 90 bp GCGTGGTTGCACTCTTGGAGATGGTGGAGAGAACTGGATCTTTTGAAAGATTCGCACTCTTGGAGATGGTaGAGAGAACTGGATCTTTTG +
Preference number: 2 (lower is better)
Translates to: AWLHSWRWWRELDLLKDSHSWRW*RELDLL
Trigger: CAAAAGATCCAGTTCTCTCCACCATCTCCAAGAGTG...CGAATCTTTCAAAAGATCCAGTTCTCTCCACCATCTCCAAGAGTGCAACCACGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000510233.5
ENST00000513005.5
ENST00000630416.2
3UTR-3UTR CCA 90 bp GGCGTGGTTGCACTCTTGGAGATGGTGGAGAGAACTGGATCTTTTGAAAGATTCTTGCACTCTTGGAGATaGTGGAGAGAACTGGATCTT +
Preference number: 2 (lower is better)
Translates to: GVVALLEMVERTGSFERFLHSWR*WRELDL
Trigger: AAGATCCAGTTCTCTCCACCATCTCCAAGAGTGCAA...GAATCTTTCAAAAGATCCAGTTCTCTCCACCATCTCCAAGAGTGCAACCACGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000510233.5
ENST00000513005.5
ENST00000630416.2
3UTR-3UTR TCA 90 bp CGGGGCATAATTGGCAACAGCCACTGCATAAGCGTTGTTCTGTATCATAACGGATCTGTTAAGCCAGAATaGAACTTGGGAGAGAATGAC +
Preference number: 2 (lower is better)
Translates to: RGIIGNSHCISVVLYHNGSVKPE*NLGEND
Trigger: GTCATTCTCTCCCAAGTTTCATTCTGGCTTAACAGA...TCCGTTATGATACAGAACAACGCTTATGCAGTGGCTGTTGCCAATTATGCCCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510233.5
ENST00000630416.2
3UTR-3UTR TCA 90 bp GCGCACCATCCTTCCCCTTCCAGAGATACTTATCCAGATGCTAATGATTACACAGTATATGGTTTCCTTTaGACAATGGACTGTGGGCAG +
Preference number: 2 (lower is better)
Translates to: AHHPSPSRDTYPDANDYTVYGFL*TMDCGQ
Trigger: CTGCCCACAGTCCATTGTTCAAAGGAAACCATATAC...TGTGTAATCATTAGCATCTGGATAAGTATCTCTGGAAGGGGAAGGATGGTGCGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507460.1
3UTR-3UTR GCA 90 bp GTTGCACTCTTGGAGATGGTGGAGAGAACTGGATCTTTTGAAAGATTCGGGGCATCCAAACACAGTTCTTaGAGGCACAGATTCTCTGTT +
Preference number: 2 (lower is better)
Translates to: VALLEMVERTGSFERFGASKHSS*RHRFSV
Trigger: AACAGAGAATCTGTGCCTGCAAGAACTGTGTTTGGA...TGCCCCGAATCTTTCAAAAGATCCAGTTCTCTCCACCATCTCCAAGAGTGCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510233.5
ENST00000630416.2
3UTR-3UTR CCA 90 bp GAACTGGATCTTTTGAAAGATTCGGGGCATAATTGGCAACAGCCACTGCATAAGATGGCTGTTTTCGCATaGAGTGCTTTCTGTCTGCAG +
Preference number: 2 (lower is better)
Translates to: ELDLLKDSGHNWQQPLHKMAVFA*SAFCLQ
Trigger: CTGCAGACAGAAAGCACTCCATGCGAAAACAGCCAT...CTTATGCAGTGGCTGTTGCCAATTATGCCCCGAATCTTTCAAAAGATCCAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000630416.2
3UTR-3UTR CCA 90 bp GCGCACCATCCTTCCCCTTCCAGAGATACTTATCCAGATGCTAATGATTACACAGTAGCAAACCACACATaGTCTCTTCCTCACCTATCT +
Preference number: 2 (lower is better)
Translates to: AHHPSPSRDTYPDANDYTVANHT*SLPHLS
Trigger: AGATAGGTGAGGAAGAGACCATGTGTGGTTTGCTAC...TGTGTAATCATTAGCATCTGGATAAGTATCTCTGGAAGGGGAAGGATGGTGCGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507460.1
3UTR CAA 90 bp ATGCCTTCACAGCACAAATGGCAAACCTCTTTATTCCTGGGAGCTTaGGAAAAAGGGCATACAGCACTGCCTTCTAACACCAAGAAAAGA +
Preference number: 2 (lower is better)
Translates to: MPSQHKWQTSLFLGA*EKGHTALPSNTKKR
Trigger: TCTTTTCTTGGTGTTAGAAGGCAGTGCTGTATGCCCTTTTTCCAAAGCTCCCAGGAATAAAGAGGTTTGCCATTTGTGCTGTGAAGGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507460.1
3UTR-3UTR TCA 90 bp GAACTGGATCTTTTGAAAGATTCGGGGCATAATTGGCAACAGCCACTGCATAAGGAGAATTCCGAGCACTaGTGCTTAGAGTTGTCATTG +
Preference number: 2 (lower is better)
Translates to: ELDLLKDSGHNWQQPLHKENSEH*CLELSL
Trigger: CAATGACAACTCTAAGCATCAGTGCTCGGAATTCTC...CTTATGCAGTGGCTGTTGCCAATTATGCCCCGAATCTTTCAAAAGATCCAGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000510233.5
ENST00000513005.5
ENST00000630416.2
3UTR-3UTR TCA 90 bp GTTGCACTCTTGGAGATGGTGGAGAGAACTGGATCTTTTGAAAGATTCGGGGCAAGAGTCCCATCATCCTaGATTCGAAGCAACTTATTT +
Preference number: 2 (lower is better)
Translates to: VALLEMVERTGSFERFGARVPSS*IRSNLF
Trigger: AAATAAGTTGCTTCGAATTCAGGATGATGGGACTCT...TGCCCCGAATCTTTCAAAAGATCCAGTTCTCTCCACCATCTCCAAGAGTGCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000513005.5
ENST00000630416.2
3UTR-3UTR GCA 90 bp GGTTCTGGCGTGGTTGCACTCTTGGAGATGGTGGAGAGAACTGGATCTTTTGAAGTTGAAAGTTTTCTTTaGTTCAGCTGGCTTGTTTTC +
Preference number: 2 (lower is better)
Translates to: GSGVVALLEMVERTGSFEVESFL*FSWLVF
Trigger: GAAAACAAGCCAGCTGAAGCAAAGAAAACTTTCAAC...TTCAAAAGATCCAGTTCTCTCCACCATCTCCAAGAGTGCAACCACGCCAGAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000510233.5
ENST00000513005.5
ENST00000630416.2
3UTR CAA 90 bp CTCTCCAGTTCTTCAATCTCCATTATGCTCCACTCATTCCTTTATTaGTTCTGCCCATGGAGAGCATTTGAGTTTGGGTCCCTTTGTTCT +
Preference number: 2 (lower is better)
Translates to: LSSSSISIMLHSFLY*FCPWRAFEFGSLCS
Trigger: AGAACAAAGGGACCCAAACTCAAATGCTCTCCATGGGCAGAACAAATAAAGGAATGAGTGGAGCATAATGGAGATTGAAGAACTGGAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507460.1
3UTR-3UTR TCA 90 bp CGGGGCATAATTGGCAACAGCCACTGCATAAGCGTTGTTCTGTATCATAACGGACTTTTCAGGTGGAAATaGGCTGTCATTACAGTATAT +
Preference number: 2 (lower is better)
Translates to: RGIIGNSHCISVVLYHNGLFRWK*AVITVY
Trigger: ATATACTGTAATGACAGCTCATTTCCACCTGAAAAG...TCCGTTATGATACAGAACAACGCTTATGCAGTGGCTGTTGCCAATTATGCCCCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510233.5
ENST00000630416.2
3UTR-3UTR TCA 90 bp TGGGTCTCAATTCAAGGACTGACCCCTAATACAGGTTCTCTGTTTAAATATGTATGTCTCCTTTCCGATTaGTTGGCCCAGCAGGTCATA +
Preference number: 2 (lower is better)
Translates to: WVSIQGLTPNTGSLFKYVCLLSD*LAQQVI
Trigger: TATGACCTGCTGGGCCAATCAATCGGAAAGGAGACA...TACATATTTAAACAGAGAACCTGTATTAGGGGTCAGTCCTTGAATTGAGACCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630416.2
3UTR-3UTR GCA 90 bp GAACTGGATCTTTTGAAAGATTCGGGGCATAATTGGCAACAGCCACTGCATAAGTCCAAACACAGTTCTTaGAGGCACAGATTCTCTGTT +
Preference number: 2 (lower is better)
Translates to: ELDLLKDSGHNWQQPLHKSKHSS*RHRFSV
Trigger: AACAGAGAATCTGTGCCTGCAAGAACTGTGTTTGGA...CTTATGCAGTGGCTGTTGCCAATTATGCCCCGAATCTTTCAAAAGATCCAGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510233.5
ENST00000630416.2
3UTR-3UTR GCA 90 bp GCGTGGTTGCACTCTTGGAGATGGTGGAGAGAACTGGATCTTTTGAAAGATTCGGTTGAAAGTTTTCTTTaGTTCAGCTGGCTTGTTTTC +
Preference number: 2 (lower is better)
Translates to: AWLHSWRWWRELDLLKDSVESFL*FSWLVF
Trigger: GAAAACAAGCCAGCTGAAGCAAAGAAAACTTTCAAC...CGAATCTTTCAAAAGATCCAGTTCTCTCCACCATCTCCAAGAGTGCAACCACGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000510233.5
ENST00000513005.5
ENST00000630416.2
3UTR-3UTR CCA 90 bp CTAGTTTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCATGGCTGTTTTCGCATaGAGTGCTTTCTGTCTGCAG +
Preference number: 2 (lower is better)
Translates to: LVFLMCTKLPITLAGTLSMAVFA*SAFCLQ
Trigger: CTGCAGACAGAAAGCACTCCATGCGAAAACAGCCAT...GCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAAACTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
3UTR-3UTR CCA 90 bp ACAAAGGGAAATGAAGCAGTTGTAACTCAATGCATCTGGAAAGAGGGTTCTTGCGTAAAGTGCTTAGCATaGCACCTCAATCTCAGAACC +
Preference number: 2 (lower is better)
Translates to: TKGNEAVVTQCIWKEGSCVKCLA*HLNLRT
Trigger: GGTTCTGAGATTGAGGTGCCATGCTAAGCACTTTAC...GCAAGAACCCTCTTTCCAGATGCATTGAGTTACAACTGCTTCATTTCCCTTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507460.1
3UTR-3UTR TCA 90 bp TTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCACTCACTGTCTGCAGTTCCATaGGTTAGCAAATGCATGTCT +
Preference number: 2 (lower is better)
Translates to: FSYVYQASNYISRDSEHSLSAVP*VSKCMS
Trigger: AGACATGCATTTGCTAACTCATGGAACTGCAGACAG...TGAGTGCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
3UTR-3UTR TCA 90 bp ACAAAGGGAAATGAAGCAGTTGTAACTCAATGCATCTGGAAAGAGGGTTCTTGCCCTCTGCAAGACAACTaGAAAACTTTAAACGGTTGG +
Preference number: 2 (lower is better)
Translates to: TKGNEAVVTQCIWKEGSCPLQDN*KTLNGW
Trigger: CCAACCGTTTAAAGTTTTTCAGTTGTCTTGCAGAGG...GCAAGAACCCTCTTTCCAGATGCATTGAGTTACAACTGCTTCATTTCCCTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507460.1
3UTR-3UTR TCA 90 bp ATGAATGAGCATCCATTGGGAAATCCTCCAAGTGCATTGGGCATTCAGCTTGAAAGAGTCCCATCATCCTaGATTCGAAGCAACTTATTT +
Preference number: 2 (lower is better)
Translates to: MNEHPLGNPPSALGIQLERVPSS*IRSNLF
Trigger: AAATAAGTTGCTTCGAATTCAGGATGATGGGACTCT...TTCAAGCTGAATGCCCAATGCACTTGGAGGATTTCCCAATGGATGCTCATTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000513005.5
ENST00000514193.5
ENST00000630416.2
3UTR-3UTR TCA 90 bp TATTCACCTGTACTGGATTTAATTGTCTCCTTTCCGATTGATTGGCCCAGCAGGAGAGTCCCATCATCCTaGATTCGAAGCAACTTATTT +
Preference number: 2 (lower is better)
Translates to: YSPVLDLIVSFPIDWPSRRVPSS*IRSNLF
Trigger: AAATAAGTTGCTTCGAATTCAGGATGATGGGACTCT...CCTGCTGGGCCAATCAATCGGAAAGGAGACAATTAAATCCAGTACAGGTGAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630416.2
3UTR-3UTR GCA 90 bp AGTTTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCACTGTTTTCGCATGGAGTaGTTTCTGTCTGCAGTTCCA +
Preference number: 2 (lower is better)
Translates to: SFSYVYQASNYISRDSEHCFRME*FLSAVP
Trigger: TGGAACTGCAGACAGAAAGCACTCCATGCGAAAACA...GTGCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
3UTR-3UTR GCA 90 bp TTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCACTCATGTTTTCGCATGGAGTaGTTTCTGTCTGCAGTTCCA +
Preference number: 2 (lower is better)
Translates to: FSYVYQASNYISRDSEHSCFRME*FLSAVP
Trigger: TGGAACTGCAGACAGAAAGCACTCCATGCGAAAACA...TGAGTGCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
3UTR-3UTR GCA 90 bp CTCATCAGTGGGAGTTTTTGGCACAATTTTCTAATCCAATATGCATGTTGCTCCTGTTTTCGCATGGAGTaGTTTCTGTCTGCAGTTCCA +
Preference number: 2 (lower is better)
Translates to: LISGSFWHNFLIQYACCSCFRME*FLSAVP
Trigger: TGGAACTGCAGACAGAAAGCACTCCATGCGAAAACA...GGAGCAACATGCATATTGGATTAGAAAATTGTGCCAAAAACTCCCACTGATGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
3UTR-3UTR TCA 90 bp CTAGTTTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCTCTGTTAAGCCAGAATaGAACTTGGGAGAGAATGAC +
Preference number: 2 (lower is better)
Translates to: LVFLMCTKLPITLAGTLSSVKPE*NLGEND
Trigger: GTCATTCTCTCCCAAGTTTCATTCTGGCTTAACAGA...GCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAAACTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000630416.2
3UTR-3UTR TCA 90 bp CTGATCTTTTCCAAAGTACACTATATTGTGTCTCATAAGATGTACATGGGTCAACCCATGGAGAGCATTTaGGTTTGGGTCCCTTTGTTC +
Preference number: 2 (lower is better)
Translates to: LIFSKVHYIVSHKMYMGQPMESI*VWVPLF
Trigger: GAACAAAGGGACCCAAACTCAAATGCTCTCCATGGG...TTGACCCATGTACATCTTATGAGACACAATATAGTGTACTTTGGAAAAGATCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507460.1
3UTR-3UTR GCA 90 bp CTAGTTTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCATTGGCAACAGCCACTaGATAAGCGTTGTTCTGTAT +
Preference number: 2 (lower is better)
Translates to: LVFLMCTKLPITLAGTLSIGNSH*ISVVLY
Trigger: ATACAGAACAACGCTTATGCAGTGGCTGTTGCCAAT...GCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAAACTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000630416.2
3UTR-3UTR GCA 90 bp GCGCACCATCCTTCCCCTTCCAGAGATACTTATCCAGATGCTAATGATTACACATTCATACAAGAAATGTaGTCTCCAGTTCTTCAATCT +
Preference number: 2 (lower is better)
Translates to: AHHPSPSRDTYPDANDYTFIQEM*SPVLQS
Trigger: AGATTGAAGAACTGGAGAGCACATTTCTTGTATGAA...TGTGTAATCATTAGCATCTGGATAAGTATCTCTGGAAGGGGAAGGATGGTGCGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507460.1
3UTR-3UTR GCA 90 bp AAGCCTCCTCTTAGGCAGATACATAATCTACAGAGTATGAAAGGAAACAGCTGTAAACACTTAGCACAGTaGCTGACACATACAGCTCAA +
Preference number: 2 (lower is better)
Translates to: KPPLRQIHNLQSMKGNSCKHLAQ*LTHTAQ
Trigger: TTGAGCTGTATGTGTCAGGCACTGTGCTAAGTGTTT...ACAGCTGTTTCCTTTCATACTCTGTAGATTATGTATCTGCCTAAGAGGAGGCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515082.5
3UTR-3UTR CCA 90 bp TGGCAAATTCCGTTAATAAGTTGCATTTGTGACCTTGGTTTTATACAAGCATGCATGGCTGTTTTCGCATaGAGTGCTTTCTGTCTGCAG +
Preference number: 2 (lower is better)
Translates to: WQIPLISCICDLGFIQACMAVFA*SAFCLQ
Trigger: CTGCAGACAGAAAGCACTCCATGCGAAAACAGCCAT...GCATGCTTGTATAAAACCAAGGTCACAAATGCAACTTATTAACGGAATTTGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
3UTR-3UTR CCA 90 bp GTTTTTCAAGCTCCAAAGCCTGATCTTTTCCAAAGTACACTATATTGTGTCTCACTTTATGAGAAGTCTTaGTTTAGGGCCAGAGGCTGC +
Preference number: 2 (lower is better)
Translates to: VFQAPKPDLFQSTLYCVSLYEKS*FRARGC
Trigger: GCAGCCTCTGGCCCTAAACCAAGACTTCTCATAAAG...TGAGACACAATATAGTGTACTTTGGAAAAGATCAGGCTTTGGAGCTTGAAAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507460.1
3UTR-3UTR CCA 90 bp GTTTTTCAAGCTCCAAAGCCTGATCTTTTCCAAAGTACACTATATTGTGTCTCATTGAACAATGGACTGTaGGCAGAGGGACATTGTGTC +
Preference number: 2 (lower is better)
Translates to: VFQAPKPDLFQSTLYCVSLNNGL*AEGHCV
Trigger: GACACAATGTCCCTCTGCCCACAGTCCATTGTTCAA...TGAGACACAATATAGTGTACTTTGGAAAAGATCAGGCTTTGGAGCTTGAAAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507460.1
3UTR-3UTR CCA 90 bp AGATGGCATGTTATCATCTTCATGAAGTATCTATTCCTACCTAATAAAGGGGCAGTTTCCTTTGAACAATaGACTGTGGGCAGAGGGACA +
Preference number: 2 (lower is better)
Translates to: RWHVIIFMKYLFLPNKGAVSFEQ*TVGRGT
Trigger: TGTCCCTCTGCCCACAGTCCATTGTTCAAAGGAAAC...TGCCCCTTTATTAGGTAGGAATAGATACTTCATGAAGATGATAACATGCCATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507460.1
3UTR-3UTR CCA 90 bp AATGAGCATCCATTGGGAAATCCTCCAAGTGCATTGGGCATTCAGCTTGAACTGTCGAAGCAACTTATTTaGCATTGTCATATTATGAGC +
Preference number: 2 (lower is better)
Translates to: NEHPLGNPPSALGIQLELSKQLI*HCHIMS
Trigger: GCTCATAATATGACAATGCCAAATAAGTTGCTTCGA...CAGTTCAAGCTGAATGCCCAATGCACTTGGAGGATTTCCCAATGGATGCTCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000513005.5
ENST00000514193.5
ENST00000630416.2
3UTR-3UTR CCA 90 bp TTGCACTCTTGGAGATGGTGGAGAGAACTGGATCTTTTGAAAGATTCGGGGCATTCGAAGCAACTTATTTaGCATTGTCATATTATGAGC +
Preference number: 2 (lower is better)
Translates to: LHSWRWWRELDLLKDSGHSKQLI*HCHIMS
Trigger: GCTCATAATATGACAATGCCAAATAAGTTGCTTCGA...ATGCCCCGAATCTTTCAAAAGATCCAGTTCTCTCCACCATCTCCAAGAGTGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000513005.5
ENST00000630416.2
3UTR-3UTR TCA 90 bp TCAACCCTTACCAAAACCTCTTCTGGTATACAAAGCTGTTGTAAATTTGAGTCACTGTCTGCAGTTCCATaGGTTAGCAAATGCATGTCT +
Preference number: 2 (lower is better)
Translates to: STLTKTSSGIQSCCKFESLSAVP*VSKCMS
Trigger: AGACATGCATTTGCTAACTCATGGAACTGCAGACAG...TGACTCAAATTTACAACAGCTTTGTATACCAGAAGAGGTTTTGGTAAGGGTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
3UTR-3UTR TCA 90 bp TGGCAAATTCCGTTAATAAGTTGCATTTGTGACCTTGGTTTTATACAAGCATGCCTGTCTGCAGTTCCATaGGTTAGCAAATGCATGTCT +
Preference number: 2 (lower is better)
Translates to: WQIPLISCICDLGFIQACLSAVP*VSKCMS
Trigger: AGACATGCATTTGCTAACTCATGGAACTGCAGACAG...GCATGCTTGTATAAAACCAAGGTCACAAATGCAACTTATTAACGGAATTTGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
3UTR-3UTR TCA 90 bp TTTCTTGGAATAAACTGGGCCATGAGAAAGCTATATACTTGGACCATATTAGCTCTGTCTGCAGTTCCATaGGTTAGCAAATGCATGTCT +
Preference number: 2 (lower is better)
Translates to: FLGINWAMRKLYTWTILALSAVP*VSKCMS
Trigger: AGACATGCATTTGCTAACTCATGGAACTGCAGACAG...AGCTAATATGGTCCAAGTATATAGCTTTCTCATGGCCCAGTTTATTCCAAGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630416.2
3UTR-3UTR TCA 90 bp CATAATCAATTGACAAATGGTGAATTCTACATACTGTGCCAAGCACTAAGGACAACAAAAGTAGGACTCTaGCCTTGTAACACTGACAGC +
Preference number: 2 (lower is better)
Translates to: HNQLTNGEFYILCQALRTTKVGL*PCNTDS
Trigger: GCTGTCAGTGTTACAAGGTCAGAGTCCTACTTTTGT...TGTCCTTAGTGCTTGGCACAGTATGTAGAATTCACCATTTGTCAATTGATTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507460.1
3UTR-3UTR GCA 90 bp TGTTCAACCCTTACCAAAACCTCTTCTGGTATACAAAGCTGTTGTAAATTTGAGAGCAACCAAACTGGATaGTTTTTCCAGTCTCCAGCA +
Preference number: 2 (lower is better)
Translates to: CSTLTKTSSGIQSCCKFESNQTG*FFQSPA
Trigger: TGCTGGAGACTGGAAAAAGCATCCAGTTTGGTTGCT...CTCAAATTTACAACAGCTTTGTATACCAGAAGAGGTTTTGGTAAGGGTTGAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
3UTR-3UTR GCA 90 bp AAAGTACTTTGGTGCTCTTCTGGAATCCATGATTATATCATGGCAGGGTTTGTGACATTAAGGGGGCAATaGGGACTTTACAAGACAAAT +
Preference number: 2 (lower is better)
Translates to: KVLWCSSGIHDYIMAGFVTLRGQ*GLYKTN
Trigger: ATTTGTCTTGTAAAGTCCGCATTGCCCCCTTAATGT...CACAAACCCTGCCATGATATAATCATGGATTCCAGAAGAGCACCAAAGTACTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381620.9
3UTR-3UTR GCA 90 bp TGGGTCTCAATTCAAGGACTGACCCCTAATACAGGTTCTCTGTTTAAATATGTAATTGGCAACAGCCACTaGATAAGCGTTGTTCTGTAT +
Preference number: 2 (lower is better)
Translates to: WVSIQGLTPNTGSLFKYVIGNSH*ISVVLY
Trigger: ATACAGAACAACGCTTATGCAGTGGCTGTTGCCAAT...TACATATTTAAACAGAGAACCTGTATTAGGGGTCAGTCCTTGAATTGAGACCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000510233.5
ENST00000513005.5
ENST00000630416.2
3UTR-3UTR CCA 90 bp AATTCTCATCAGTGGGAGTTTTTGGCACAATTTTCTAATCCAATATGCATGTTGCCACAGCAACCAAACTaGATGCTTTTTCCAGTCTCC +
Preference number: 2 (lower is better)
Translates to: NSHQWEFLAQFSNPICMLPQQPN*MLFPVS
Trigger: GGAGACTGGAAAAAGCATCCAGTTTGGTTGCTGTGG...CAACATGCATATTGGATTAGAAAATTGTGCCAAAAACTCCCACTGATGAGAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
3UTR-3UTR CCA 90 bp GTTTTTCAAGCTCCAAAGCCTGATCTTTTCCAAAGTACACTATATTGTGTCTCAACTCAGTCCAGTGTTTaGACCATGTGCATCAGAATC +
Preference number: 2 (lower is better)
Translates to: VFQAPKPDLFQSTLYCVSTQSSV*TMCIRI
Trigger: GATTCTGATGCACATGGTCCAAACACTGGACTGAGT...TGAGACACAATATAGTGTACTTTGGAAAAGATCAGGCTTTGGAGCTTGAAAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507460.1
3UTR-3UTR CCA 90 bp AGATGGCATGTTATCATCTTCATGAAGTATCTATTCCTACCTAATAAAGGGGCATATTCCTGGGAGCTTTaGAAAAAGGGCATACAGCAC +
Preference number: 2 (lower is better)
Translates to: RWHVIIFMKYLFLPNKGAYSWEL*KKGIQH
Trigger: GTGCTGTATGCCCTTTTTCCAAAGCTCCCAGGAATA...TGCCCCTTTATTAGGTAGGAATAGATACTTCATGAAGATGATAACATGCCATCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507460.1
3UTR CAA 90 bp TCAGTCCAGTGTTTGGACCATGTGCATCAGAATCAAGAACATTTGTaGAAATATAGTTCTGGGACCAAACCAAATCTGAATGAGTCTTTG +
Preference number: 2 (lower is better)
Translates to: SVQCLDHVHQNQEHL*KYSSGTKPNLNESL
Trigger: CAAAGACTCATTCAGATTTGGTTTGGTCCCAGAACTATATTTCAACAAATGTTCTTGATTCTGATGCACATGGTCCAAACACTGGACTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507460.1
3UTR-3UTR TCA 90 bp TTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCACTCACTTTTCAGGTGGAAATaGGCTGTCATTACAGTATAT +
Preference number: 2 (lower is better)
Translates to: FSYVYQASNYISRDSEHSLFRWK*AVITVY
Trigger: ATATACTGTAATGACAGCTCATTTCCACCTGAAAAG...TGAGTGCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630416.2
3UTR-3UTR TCA 90 bp AGATGGCATGTTATCATCTTCATGAAGTATCTATTCCTACCTAATAAAGGGGCAAACCTTGAAAACAGATaGCTCAGTCCAGTGTTTGGA +
Preference number: 2 (lower is better)
Translates to: RWHVIIFMKYLFLPNKGANLENR*LSPVFG
Trigger: TCCAAACACTGGACTGAGTCATCTGTTTTCAAGGTT...TGCCCCTTTATTAGGTAGGAATAGATACTTCATGAAGATGATAACATGCCATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507460.1
3UTR-3UTR TCA 90 bp GTTTTTCAAGCTCCAAAGCCTGATCTTTTCCAAAGTACACTATATTGTGTCTCAAACAGCAGGGGCTACTaGATTAGTCCATTTCACTAT +
Preference number: 2 (lower is better)
Translates to: VFQAPKPDLFQSTLYCVSNSRGY*ISPFHY
Trigger: ATAGTGAAATGGACTAATTCAGTAGCCCCTGCTGTT...TGAGACACAATATAGTGTACTTTGGAAAAGATCAGGCTTTGGAGCTTGAAAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000507460.1
3UTR-3UTR TCA 90 bp CTGATCTTTTCCAAAGTACACTATATTGTGTCTCATAAGATGTACATGGGTCAACTGCACTGTCCTTTCTaGTCCTTCATGTCTAAACCT +
Preference number: 2 (lower is better)
Translates to: LIFSKVHYIVSHKMYMGQLHCPF*SFMSKP
Trigger: AGGTTTAGACATGAAGGATCAGAAAGGACAGTGCAG...TTGACCCATGTACATCTTATGAGACACAATATAGTGTACTTTGGAAAAGATCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507460.1
3UTR-3UTR GCA 90 bp TGGCAAATTCCGTTAATAAGTTGCATTTGTGACCTTGGTTTTATACAAGCATGCATCCAATATGCATGTTaGTCCACAGCAACCAAACTG +
Preference number: 2 (lower is better)
Translates to: WQIPLISCICDLGFIQACIQYAC*STATKL
Trigger: CAGTTTGGTTGCTGTGGAGCAACATGCATATTGGAT...GCATGCTTGTATAAAACCAAGGTCACAAATGCAACTTATTAACGGAATTTGCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
3UTR-3UTR GCA 90 bp CTGATCTTTTCCAAAGTACACTATATTGTGTCTCATAAGATGTACATGGGTCAAAGGGTTGCACTTCCCTaGCACCTTGAAGTTAAACAT +
Preference number: 2 (lower is better)
Translates to: LIFSKVHYIVSHKMYMGQRVALP*HLEVKH
Trigger: ATGTTTAACTTCAAGGTGGCAGGGAAGTGCAACCCT...TTGACCCATGTACATCTTATGAGACACAATATAGTGTACTTTGGAAAAGATCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507460.1
3UTR-3UTR GCA 90 bp GCTACTGAATTTAAGGTTCAGCAGACCAATTTAACCCATCTATCAATCAACATTCTTCAACTGGAACTATaGCTTCACAGCACAAATGGC +
Preference number: 2 (lower is better)
Translates to: ATEFKVQQTNLTHLSINILQLEL*LHSTNG
Trigger: GCCATTTGTGCTGTGAAGGCATAGTTCCAGTTGAAG...AATGTTGATTGATAGATGGGTTAAATTGGTCTGCTGAACCTTAAATTCAGTAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507460.1
3UTR-3UTR GCA 90 bp GTTTTTCAAGCTCCAAAGCCTGATCTTTTCCAAAGTACACTATATTGTGTCTCAGCAGTTGTAACTCAATaGATCTGGAAAGAGGGTTCT +
Preference number: 2 (lower is better)
Translates to: VFQAPKPDLFQSTLYCVSAVVTQ*IWKEGS
Trigger: AGAACCCTCTTTCCAGATGCATTGAGTTACAACTGC...TGAGACACAATATAGTGTACTTTGGAAAAGATCAGGCTTTGGAGCTTGAAAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507460.1
3UTR-3UTR CCA 90 bp TCAACCCTTACCAAAACCTCTTCTGGTATACAAAGCTGTTGTAAATTTGAGTCAGTGTTTGTCATAGTGTaGGGCACCTATGAATTCTCA +
Preference number: 2 (lower is better)
Translates to: STLTKTSSGIQSCCKFESVFVIV*GTYEFS
Trigger: TGAGAATTCATAGGTGCCCCACACTATGACAAACAC...TGACTCAAATTTACAACAGCTTTGTATACCAGAAGAGGTTTTGGTAAGGGTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
3UTR-3UTR TCA 90 bp AGGTTCCTCACATTCTCTCTGCATGTGATCGTATTATTAATTTGTAGCAAAGGATCAGTGGGTGTGACATaGGTGATTTTAACACCAATT +
Preference number: 2 (lower is better)
Translates to: RFLTFSLHVIVLLICSKGSVGVT*VILTPI
Trigger: AATTGGTGTTAAAATCACTCATGTCACACCCACTGA...TCCTTTGCTACAAATTAATAATACGATCACATGCAGAGAGAATGTGAGGAACCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381620.9
3UTR-3UTR GCA 90 bp AGGTTCCTCACATTCTCTCTGCATGTGATCGTATTATTAATTTGTAGCAAAGGAATAGAGCAATTTCATTaGTTGCCTTCTGGCATTGTG +
Preference number: 2 (lower is better)
Translates to: RFLTFSLHVIVLLICSKGIEQFH*LPSGIV
Trigger: CACAATGCCAGAAGGCAAGCAATGAAATTGCTCTAT...TCCTTTGCTACAAATTAATAATACGATCACATGCAGAGAGAATGTGAGGAACCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381620.9
3UTR-3UTR GCA 90 bp GTTTTTCAAGCTCCAAAGCCTGATCTTTTCCAAAGTACACTATATTGTGTCTCATTCCTTTATTTGTTCTaGCCATGGAGAGCATTTGAG +
Preference number: 2 (lower is better)
Translates to: VFQAPKPDLFQSTLYCVSFLYLF*PWRAFE
Trigger: CTCAAATGCTCTCCATGGGCAGAACAAATAAAGGAA...TGAGACACAATATAGTGTACTTTGGAAAAGATCAGGCTTTGGAGCTTGAAAAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507460.1
3UTR-3UTR GCA 90 bp CTGATCTTTTCCAAAGTACACTATATTGTGTCTCATAAGATGTACATGGGTCAAAAGGGCATACAGCACTaGCTTCTAACACCAAGAAAA +
Preference number: 2 (lower is better)
Translates to: LIFSKVHYIVSHKMYMGQKGIQH*LLTPRK
Trigger: TTTTCTTGGTGTTAGAAGGCAGTGCTGTATGCCCTT...TTGACCCATGTACATCTTATGAGACACAATATAGTGTACTTTGGAAAAGATCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507460.1
3UTR-3UTR GCA 90 bp GTTTTTCAAGCTCCAAAGCCTGATCTTTTCCAAAGTACACTATATTGTGTCTCATTTTCTGCTAAACACTaGACTGTCCTTTCTGATCCT +
Preference number: 2 (lower is better)
Translates to: VFQAPKPDLFQSTLYCVSFSAKH*TVLSDP
Trigger: AGGATCAGAAAGGACAGTGCAGTGTTTAGCAGAAAA...TGAGACACAATATAGTGTACTTTGGAAAAGATCAGGCTTTGGAGCTTGAAAAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000507460.1
3UTR-3UTR CCA 90 bp AAAGTACTTTGGTGCTCTTCTGGAATCCATGATTATATCATGGCAGGGTTTGTGATGAATTCTCATCAGTaGGAGTTTTTGGCACAATTT +
Preference number: 2 (lower is better)
Translates to: KVLWCSSGIHDYIMAGFVMNSHQ*EFLAQF
Trigger: AAATTGTGCCAAAAACTCCCACTGATGAGAATTCAT...CACAAACCCTGCCATGATATAATCATGGATTCCAGAAGAGCACCAAAGTACTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381620.9
3UTR-3UTR CCA 90 bp CATAATCAATTGACAAATGGTGAATTCTACATACTGTGCCAAGCACTAAGGACACAATGTTTTAGGTGGTaGAAGTCCATCAATCCGAAA +
Preference number: 2 (lower is better)
Translates to: HNQLTNGEFYILCQALRTQCFRW*KSINPK
Trigger: TTTCGGATTGATGGACTTCCACCACCTAAAACATTG...TGTCCTTAGTGCTTGGCACAGTATGTAGAATTCACCATTTGTCAATTGATTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507460.1
3UTR-3UTR CCA 90 bp GCTACTGAATTTAAGGTTCAGCAGACCAATTTAACCCATCTATCAATCAACATTAAACCTCTTTATTCCTaGGAGCTTTGGAAAAAGGGC +
Preference number: 2 (lower is better)
Translates to: ATEFKVQQTNLTHLSINIKPLYS*ELWKKG
Trigger: GCCCTTTTTCCAAAGCTCCCAGGAATAAAGAGGTTT...AATGTTGATTGATAGATGGGTTAAATTGGTCTGCTGAACCTTAAATTCAGTAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507460.1
3UTR-3UTR TCA 90 bp GAACTGCTTTCACAAGAGAAAAATGTGCCAATTAACTGCCCTTTCCTTTATAATACTCATGAACAGAGCTaGTGTCAGATACAATGTTTG +
Preference number: 2 (lower is better)
Translates to: ELLSQEKNVPINCPFLYNTHEQS*CQIQCL
Trigger: CAAACATTGTATCTGACATCAGCTCTGTTCATGAGT...ATTATAAAGGAAAGGGCAGTTAATTGGCACATTTTTCTCTTGTGAAAGCAGTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
3UTR-3UTR TCA 90 bp TCAACCCTTACCAAAACCTCTTCTGGTATACAAAGCTGTTGTAAATTTGAGTCAATAATTAGTGGCTTCTaGGTCTTGAAAAGAAGCCTT +
Preference number: 2 (lower is better)
Translates to: STLTKTSSGIQSCCKFESIISGF*VLKRSL
Trigger: AAGGCTTCTTTTCAAGACTCAGAAGCCACTAATTAT...TGACTCAAATTTACAACAGCTTTGTATACCAGAAGAGGTTTTGGTAAGGGTTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
3UTR-3UTR TCA 90 bp TGGCAAATTCCGTTAATAAGTTGCATTTGTGACCTTGGTTTTATACAAGCATGCTCCACAATCTATTGGTaGTGTTTTAAAGTTGCAGTG +
Preference number: 2 (lower is better)
Translates to: WQIPLISCICDLGFIQACSTIYW*CFKVAV
Trigger: CACTGCAACTTTAAAACATCACCAATAGATTGTGGA...GCATGCTTGTATAAAACCAAGGTCACAAATGCAACTTATTAACGGAATTTGCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
3UTR-3UTR TCA 90 bp AGATGGCATGTTATCATCTTCATGAAGTATCTATTCCTACCTAATAAAGGGGCAATACTTATGTGGCAATaGTCAGATAAAACTCAACCC +
Preference number: 2 (lower is better)
Translates to: RWHVIIFMKYLFLPNKGAILMWQ*SDKTQP
Trigger: GGGTTGAGTTTTATCTGATCATTGCCACATAAGTAT...TGCCCCTTTATTAGGTAGGAATAGATACTTCATGAAGATGATAACATGCCATCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507460.1
3UTR-3UTR TCA 90 bp CTGATCTTTTCCAAAGTACACTATATTGTGTCTCATAAGATGTACATGGGTCAATACTGTCACGGAGGTTaGAATTTCAGACTAACACTT +
Preference number: 2 (lower is better)
Translates to: LIFSKVHYIVSHKMYMGQYCHGG*NFRLTL
Trigger: AAGTGTTAGTCTGAAATTTCAACCTCCGTGACAGTA...TTGACCCATGTACATCTTATGAGACACAATATAGTGTACTTTGGAAAAGATCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507460.1
3UTR-3UTR TCA 90 bp GTTTTTCAAGCTCCAAAGCCTGATCTTTTCCAAAGTACACTATATTGTGTCTCATCAATTGACAAATGGTaGATTCTACATACTGTGCCA +
Preference number: 2 (lower is better)
Translates to: VFQAPKPDLFQSTLYCVSSIDKW*ILHTVP
Trigger: TGGCACAGTATGTAGAATTCACCATTTGTCAATTGA...TGAGACACAATATAGTGTACTTTGGAAAAGATCAGGCTTTGGAGCTTGAAAAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507460.1
3UTR-3UTR GCA 90 bp TTTCTTGGAATAAACTGGGCCATGAGAAAGCTATATACTTGGACCATATTAGCTGTTGAAAGTTTTCTTTaGTTCAGCTGGCTTGTTTTC +
Preference number: 2 (lower is better)
Translates to: FLGINWAMRKLYTWTILAVESFL*FSWLVF
Trigger: GAAAACAAGCCAGCTGAAGCAAAGAAAACTTTCAAC...AGCTAATATGGTCCAAGTATATAGCTTTCTCATGGCCCAGTTTATTCCAAGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630416.2
3UTR-3UTR CCA 90 bp GCTACTGAATTTAAGGTTCAGCAGACCAATTTAACCCATCTATCAATCAACATTTATAATCAGTCACTATaGAAGATGACTTGCACCCTG +
Preference number: 2 (lower is better)
Translates to: ATEFKVQQTNLTHLSINIYNQSL*KMTCTL
Trigger: CAGGGTGCAAGTCATCTTCCATAGTGACTGATTATA...AATGTTGATTGATAGATGGGTTAAATTGGTCTGCTGAACCTTAAATTCAGTAGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507460.1
3UTR CAA 90 bp CTTAAAGTATCTAATAATGCATACCATATAGAGCAATTTCATTGCTaGCCTTCTGGCATTGTGTACTTCCTTATACAATTGCACACATCC +
Preference number: 2 (lower is better)
Translates to: LKVSNNAYHIEQFHC*PSGIVYFLIQLHTS
Trigger: GGATGTGTGCAATTGTATAAGGAAGTACACAATGCCAGAAGGCAAGCAATGAAATTGCTCTATATGGTATGCATTATTAGATACTTTAAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381620.9
3UTR CAA 90 bp TCATTTTTAACCAGAACCTTGAAAACAGATGACTCAGTCCAGTGTTaGGACCATGTGCATCAGAATCAAGAACATTTGTTGAAATATAGT +
Preference number: 2 (lower is better)
Translates to: SFLTRTLKTDDSVQC*DHVHQNQEHLLKYS
Trigger: ACTATATTTCAACAAATGTTCTTGATTCTGATGCACATGGTCCAAACACTGGACTGAGTCATCTGTTTTCAAGGTTCTGGTTAAAAATGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507460.1
3UTR-3UTR GCA 90 bp TGGCAAATTCCGTTAATAAGTTGCATTTGTGACCTTGGTTTTATACAAGCATGCTATTTGAGCTTGTCATaGTGTAATATGTACATGGCT +
Preference number: 2 (lower is better)
Translates to: WQIPLISCICDLGFIQACYLSLS*CNMYMA
Trigger: AGCCATGTACATATTACAGCATGACAAGCTCAAATA...GCATGCTTGTATAAAACCAAGGTCACAAATGCAACTTATTAACGGAATTTGCCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
3UTR-3UTR GCA 90 bp CATAATCAATTGACAAATGGTGAATTCTACATACTGTGCCAAGCACTAAGGACACTTCAATCTCCATTATaGTCCACTCATTCCTTTATT +
Preference number: 2 (lower is better)
Translates to: HNQLTNGEFYILCQALRTLQSPL*STHSFI
Trigger: AATAAAGGAATGAGTGGAGCATAATGGAGATTGAAG...TGTCCTTAGTGCTTGGCACAGTATGTAGAATTCACCATTTGTCAATTGATTATG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507460.1
3UTR-3UTR GCA 90 bp GCTACTGAATTTAAGGTTCAGCAGACCAATTTAACCCATCTATCAATCAACATTAGTGTTTGGACCATGTaGATCAGAATCAAGAACATT +
Preference number: 2 (lower is better)
Translates to: ATEFKVQQTNLTHLSINISVWTM*IRIKNI
Trigger: AATGTTCTTGATTCTGATGCACATGGTCCAAACACT...AATGTTGATTGATAGATGGGTTAAATTGGTCTGCTGAACCTTAAATTCAGTAGC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507460.1
3UTR-3UTR CCA 90 bp AGGTTCCTCACATTCTCTCTGCATGTGATCGTATTATTAATTTGTAGCAAAGGATGTTACAAGTGGTTTTaGTATAGTGTCCATGTTTCT +
Preference number: 2 (lower is better)
Translates to: RFLTFSLHVIVLLICSKGCYKWF*YSVHVS
Trigger: AGAAACATGGACACTATACCAAAACCACTTGTAACA...TCCTTTGCTACAAATTAATAATACGATCACATGCAGAGAGAATGTGAGGAACCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381620.9
3UTR CCA 72 bp CTCTGCTCAGATTCTCACATGGCTGAAATCAAGGTATaGGTGTGCTGTGCTCCTTTCTGGAGCCTCTGGGGA +
Preference number: 3 (lower is better)
Translates to: LCSDSHMAEIKV*VCCAPFWSLWG
Trigger: TCCCCAGAGGCTCCAGAAAGGAGCACAGCACACCCATACCTTGATTTCAGCCATGTGAGAATCTGAGCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507460.1
3UTR-3UTR CAA 90 bp CGGGGCATAATTGGCAACAGCCACTGCATAAGCGTTGTTCTGTATCATAACGGAGGCGTGGTTGCACTCTaGGAGATGGTGGAGAGAACT +
Preference number: 3 (lower is better)
Translates to: RGIIGNSHCISVVLYHNGGVVAL*EMVERT
Trigger: AGTTCTCTCCACCATCTCCAAGAGTGCAACCACGCC...TCCGTTATGATACAGAACAACGCTTATGCAGTGGCTGTTGCCAATTATGCCCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000510233.5
ENST00000513005.5
ENST00000630416.2
3UTR-3UTR CAA 90 bp AGCTGGCTTGTTTTCTGGCTTCTTGTTGGGTTCTGGCGTGGTTGCACTCTTGGATTGTCTCCTTTCCGATaGATTGGCCCAGCAGGTCAT +
Preference number: 3 (lower is better)
Translates to: SWLVFWLLVGFWRGCTLGLSPFR*IGPAGH
Trigger: ATGACCTGCTGGGCCAATCAATCGGAAAGGAGACAA...TCCAAGAGTGCAACCACGCCAGAACCCAACAAGAAGCCAGAAAACAAGCCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630416.2
3UTR CCA 72 bp CTGGCTTGTTTTCTGGCTTCTTGTTGGGTTCTGGCGTaGTTGCACTCTTGGAGATGGTGGAGAGAACTGGAT +
Preference number: 3 (lower is better)
Translates to: LACFLASCWVLA*LHSWRWWRELD
Trigger: ATCCAGTTCTCTCCACCATCTCCAAGAGTGCAACCACGCCAGAACCCAACAAGAAGCCAGAAAACAAGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000510233.5
ENST00000513005.5
ENST00000630416.2
3UTR CCA 72 bp TCTTTGCTTCAGCTGGCTTGTTTTCTGGCTTCTTGTTaGGTTCTGGCGTGGTTGCACTCTTGGAGATGGTGG +
Preference number: 3 (lower is better)
Translates to: SLLQLACFLASC*VLAWLHSWRWW
Trigger: CCACCATCTCCAAGAGTGCAACCACGCCAGAACCCAACAAGAAGCCAGAAAACAAGCCAGCTGAAGCAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000510233.5
ENST00000513005.5
ENST00000630416.2
3UTR CCA 72 bp TCTCATCTCCTAGAGGCTGTTGTGTTCCTTGCCATGTaGCCCCCTACCAGCAATGAAGAATCTCCCTCATGT +
Preference number: 3 (lower is better)
Translates to: SHLLEAVVFLAM*PPTSNEESPSC
Trigger: ACATGAGGGAGATTCTTCATTGCTGGTAGGGGGCCACATGGCAAGGAACACAACAGCCTCTAGGAGATGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507460.1
3UTR-3UTR CAA 90 bp GCGCACCATCCTTCCCCTTCCAGAGATACTTATCCAGATGCTAATGATTACACAGTGGGCAGAGGGACATaGTGTCACATCTGGGCAGAA +
Preference number: 3 (lower is better)
Translates to: AHHPSPSRDTYPDANDYTVGRGT*CHIWAE
Trigger: TTCTGCCCAGATGTGACACAATGTCCCTCTGCCCAC...TGTGTAATCATTAGCATCTGGATAAGTATCTCTGGAAGGGGAAGGATGGTGCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507460.1
3UTR GCA 72 bp TCAGATTCTCACATGGCTGAAATCAAGGTATGGGTGTaGTGTGCTCCTTTCTGGAGCCTCTGGGGAAGAATC +
Preference number: 3 (lower is better)
Translates to: SDSHMAEIKVWV*CAPFWSLWGRI
Trigger: GATTCTTCCCCAGAGGCTCCAGAAAGGAGCACAGCACACCCATACCTTGATTTCAGCCATGTGAGAATCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507460.1
3UTR CCA 72 bp CAATGGACTGTGGGCAGAGGGACATTGTGTCACATCTaGGCAGAAGCTTTAAATGACAGTGTACACCTAGCC +
Preference number: 3 (lower is better)
Translates to: QWTVGRGTLCHI*AEALNDSVHLA
Trigger: GGCTAGGTGTACACTGTCATTTAAAGCTTCTGCCCAGATGTGACACAATGTCCCTCTGCCCACAGTCCATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507460.1
3UTR-3UTR CAA 90 bp GTTCTGGCGTGGTTGCACTCTTGGAGATGGTGGAGAGAACTGGATCTTTTGAAATTTTCTGGCTTCTTGTaGGGTTCTGGCGTGGTTGCA +
Preference number: 3 (lower is better)
Translates to: VLAWLHSWRWWRELDLLKFSGFL*GSGVVA
Trigger: TGCAACCACGCCAGAACCCAACAAGAAGCCAGAAAA...TTTCAAAAGATCCAGTTCTCTCCACCATCTCCAAGAGTGCAACCACGCCAGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000510233.5
ENST00000513005.5
ENST00000630416.2
3UTR GCA 72 bp CTTGTTTTCTGGCTTCTTGTTGGGTTCTGGCGTGGTTaGACTCTTGGAGATGGTGGAGAGAACTGGATCTTT +
Preference number: 3 (lower is better)
Translates to: LVFWLLVGFWRG*TLGDGGENWIF
Trigger: AAAGATCCAGTTCTCTCCACCATCTCCAAGAGTGCAACCACGCCAGAACCCAACAAGAAGCCAGAAAACAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000510233.5
ENST00000513005.5
ENST00000630416.2
3UTR CCA 72 bp CTGGCTTCTTGTTGGGTTCTGGCGTGGTTGCACTCTTaGAGATGGTGGAGAGAACTGGATCTTTTGAAAGAT +
Preference number: 3 (lower is better)
Translates to: LASCWVLAWLHS*RWWRELDLLKD
Trigger: ATCTTTCAAAAGATCCAGTTCTCTCCACCATCTCCAAGAGTGCAACCACGCCAGAACCCAACAAGAAGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000510233.5
ENST00000513005.5
ENST00000630416.2
3UTR CCA 72 bp GTGCCAAGCACTAAGGACACAGTAGCAAACCACACATaGTCTCTTCCTCACCTATCTAACTCCATTCTCCCT +
Preference number: 3 (lower is better)
Translates to: VPSTKDTVANHT*SLPHLSNSILP
Trigger: AGGGAGAATGGAGTTAGATAGGTGAGGAAGAGACCATGTGTGGTTTGCTACTGTGTCCTTAGTGCTTGGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507460.1
3UTR-3UTR CAA 90 bp GCGCACCATCCTTCCCCTTCCAGAGATACTTATCCAGATGCTAATGATTACACAGCCCATGGAGAGCATTaGAGTTTGGGTCCCTTTGTT +
Preference number: 3 (lower is better)
Translates to: AHHPSPSRDTYPDANDYTAHGEH*SLGPFV
Trigger: AACAAAGGGACCCAAACTCAAATGCTCTCCATGGGC...TGTGTAATCATTAGCATCTGGATAAGTATCTCTGGAAGGGGAAGGATGGTGCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507460.1
3UTR-3UTR CAA 90 bp TTGAACAATGGACTGTGGGCAGAGGGACATTGTGTCACATCTGGGCAGAAGCTTCACTCATTCCTTTATTaGTTCTGCCCATGGAGAGCA +
Preference number: 3 (lower is better)
Translates to: LNNGLWAEGHCVTSGQKLHSFLY*FCPWRA
Trigger: TGCTCTCCATGGGCAGAACAAATAAAGGAATGAGTG...AAGCTTCTGCCCAGATGTGACACAATGTCCCTCTGCCCACAGTCCATTGTTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507460.1
3UTR-3UTR CAA 90 bp GGCGTGGTTGCACTCTTGGAGATGGTGGAGAGAACTGGATCTTTTGAAAGATTCCATTGGGCATTCAGCTaGAACTGTAAGCCTCATGGT +
Preference number: 3 (lower is better)
Translates to: GVVALLEMVERTGSFERFHWAFS*NCKPHG
Trigger: ACCATGAGGCTTACAGTTCAAGCTGAATGCCCAATG...GAATCTTTCAAAAGATCCAGTTCTCTCCACCATCTCCAAGAGTGCAACCACGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000513005.5
ENST00000630416.2
3UTR-3UTR CAA 90 bp AGCTGGCTTGTTTTCTGGCTTCTTGTTGGGTTCTGGCGTGGTTGCACTCTTGGAGCAAGGCAGATAGGTTaGAATCACAAAATACCCAAT +
Preference number: 3 (lower is better)
Translates to: SWLVFWLLVGFWRGCTLGARQIG*NHKIPN
Trigger: ATTGGGTATTTTGTGATTCAAACCTATCTGCCTTGC...TCCAAGAGTGCAACCACGCCAGAACCCAACAAGAAGCCAGAAAACAAGCCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510233.5
ENST00000630416.2
3UTR-3UTR CAA 90 bp AGCTGGCTTGTTTTCTGGCTTCTTGTTGGGTTCTGGCGTGGTTGCACTCTTGGATCATTGTTAGGACAGTaGTTACTCCAAACACAGTTC +
Preference number: 3 (lower is better)
Translates to: SWLVFWLLVGFWRGCTLGSLLGQ*LLQTQF
Trigger: GAACTGTGTTTGGAGTAACAACTGTCCTAACAATGA...TCCAAGAGTGCAACCACGCCAGAACCCAACAAGAAGCCAGAAAACAAGCCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510233.5
ENST00000630416.2
3UTR TCA 72 bp CTATGTCTTGGTTCTCTGCTCAGATTCTCACATGGCTaGAATCAAGGTATGGGTGTGCTGTGCTCCTTTCTG +
Preference number: 3 (lower is better)
Translates to: LCLGSLLRFSHG*NQGMGVLCSFL
Trigger: CAGAAAGGAGCACAGCACACCCATACCTTGATTTCAGCCATGTGAGAATCTGAGCAGAGAACCAAGACATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507460.1
3UTR TCA 72 bp GTCTCCTTTCCGATTGATTGGCCCAGCAGGTCATATTaGTTTAACCTAGAGCCATCAGGAGCAACCTGTACT +
Preference number: 3 (lower is better)
Translates to: VSFPIDWPSRSY*FNLEPSGATCT
Trigger: AGTACAGGTTGCTCCTGATGGCTCTAGGTTAAATCAATATGACCTGCTGGGCCAATCAATCGGAAAGGAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630416.2
3UTR CCA 72 bp CCTAGTAAGCTAATTCAGCAATTGCAATCCCACCGGTaGCATCCCTTGGGATCAATTCAGGCGTCATTCTAT +
Preference number: 3 (lower is better)
Translates to: PSKLIQQLQSHR*HPLGSIQASFY
Trigger: ATAGAATGACGCCTGAATTGATCCCAAGGGATGCCACCGGTGGGATTGCAATTGCTGAATTAGCTTACTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381620.9
3UTR CCA 72 bp CATGCTATGTCTTGGTTCTCTGCTCAGATTCTCACATaGCTGAAATCAAGGTATGGGTGTGCTGTGCTCCTT +
Preference number: 3 (lower is better)
Translates to: HAMSWFSAQILT*LKSRYGCAVLL
Trigger: AAGGAGCACAGCACACCCATACCTTGATTTCAGCCATGTGAGAATCTGAGCAGAGAACCAAGACATAGCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507460.1
3UTR-3UTR CAA 90 bp GAACTGGATCTTTTGAAAGATTCGGGGCATAATTGGCAACAGCCACTGCATAAGCATTGGGCATTCAGCTaGAACTGTAAGCCTCATGGT +
Preference number: 3 (lower is better)
Translates to: ELDLLKDSGHNWQQPLHKHWAFS*NCKPHG
Trigger: ACCATGAGGCTTACAGTTCAAGCTGAATGCCCAATG...CTTATGCAGTGGCTGTTGCCAATTATGCCCCGAATCTTTCAAAAGATCCAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000513005.5
ENST00000630416.2
3UTR GCA 72 bp CCAATATGCATGTTGCTCCACAGCAACCAAACTGGATaGTTTTTCCAGTCTCCAGCACCCGTAAAATTTAGC +
Preference number: 3 (lower is better)
Translates to: PICMLLHSNQTG*FFQSPAPVKFS
Trigger: GCTAAATTTTACGGGTGCTGGAGACTGGAAAAAGCATCCAGTTTGGTTGCTGTGGAGCAACATGCATATTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
3UTR CCA 72 bp GTTGAAAGTTTTCTTTGCTTCAGCTGGCTTGTTTTCTaGCTTCTTGTTGGGTTCTGGCGTGGTTGCACTCTT +
Preference number: 3 (lower is better)
Translates to: VESFLCFSWLVF*LLVGFWRGCTL
Trigger: AAGAGTGCAACCACGCCAGAACCCAACAAGAAGCCAGAAAACAAGCCAGCTGAAGCAAAGAAAACTTTCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000510233.5
ENST00000513005.5
ENST00000630416.2
3UTR CCA 72 bp AACATGTGTATATGGTTTCCTTTGAACAATGGACTGTaGGCAGAGGGACATTGTGTCACATCTGGGCAGAAG +
Preference number: 3 (lower is better)
Translates to: NMCIWFPLNNGL*AEGHCVTSGQK
Trigger: CTTCTGCCCAGATGTGACACAATGTCCCTCTGCCCACAGTCCATTGTTCAAAGGAAACCATATACACATGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507460.1
3UTR CCA 72 bp CACTTCCCTGCCACCTTGAAGTTAAACATGTGTATATaGTTTCCTTTGAACAATGGACTGTGGGCAGAGGGA +
Preference number: 3 (lower is better)
Translates to: HFPATLKLNMCI*FPLNNGLWAEG
Trigger: TCCCTCTGCCCACAGTCCATTGTTCAAAGGAAACCATATACACATGTTTAACTTCAAGGTGGCAGGGAAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507460.1
3UTR CCA 72 bp AGCACAAATGGCAAACCTCTTTATTCCTGGGAGCTTTaGAAAAAGGGCATACAGCACTGCCTTCTAACACCA +
Preference number: 3 (lower is better)
Translates to: STNGKPLYSWEL*KKGIQHCLLTP
Trigger: TGGTGTTAGAAGGCAGTGCTGTATGCCCTTTTTCCAAAGCTCCCAGGAATAAAGAGGTTTGCCATTTGTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507460.1
3UTR-3UTR CAA 90 bp TTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCACTCAAGGGTCCACAAAGGGTaGTACAGGATCCCCATTTTC +
Preference number: 3 (lower is better)
Translates to: FSYVYQASNYISRDSEHSRVHKG*YRIPIF
Trigger: GAAAATGGGGATCCTGTACAACCCTTTGTGGACCCT...TGAGTGCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
3UTR-3UTR CAA 90 bp CTCATCAGTGGGAGTTTTTGGCACAATTTTCTAATCCAATATGCATGTTGCTCCAGGGTCCACAAAGGGTaGTACAGGATCCCCATTTTC +
Preference number: 3 (lower is better)
Translates to: LISGSFWHNFLIQYACCSRVHKG*YRIPIF
Trigger: GAAAATGGGGATCCTGTACAACCCTTTGTGGACCCT...GGAGCAACATGCATATTGGATTAGAAAATTGTGCCAAAAACTCCCACTGATGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
3UTR-3UTR CAA 90 bp AGTTTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCACAGGGTCCACAAAGGGTaGTACAGGATCCCCATTTTC +
Preference number: 3 (lower is better)
Translates to: SFSYVYQASNYISRDSEHRVHKG*YRIPIF
Trigger: GAAAATGGGGATCCTGTACAACCCTTTGTGGACCCT...GTGCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
3UTR-3UTR CAA 90 bp GTTGCACTCTTGGAGATGGTGGAGAGAACTGGATCTTTTGAAAGATTCGGGGCAGCAAGGCAGATAGGTTaGAATCACAAAATACCCAAT +
Preference number: 3 (lower is better)
Translates to: VALLEMVERTGSFERFGAARQIG*NHKIPN
Trigger: ATTGGGTATTTTGTGATTCAAACCTATCTGCCTTGC...TGCCCCGAATCTTTCAAAAGATCCAGTTCTCTCCACCATCTCCAAGAGTGCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000510233.5
ENST00000630416.2
3UTR-3UTR CAA 90 bp GGCGTGGTTGCACTCTTGGAGATGGTGGAGAGAACTGGATCTTTTGAAAGATTCTCATTGTTAGGACAGTaGTTACTCCAAACACAGTTC +
Preference number: 3 (lower is better)
Translates to: GVVALLEMVERTGSFERFSLLGQ*LLQTQF
Trigger: GAACTGTGTTTGGAGTAACAACTGTCCTAACAATGA...GAATCTTTCAAAAGATCCAGTTCTCTCCACCATCTCCAAGAGTGCAACCACGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510233.5
ENST00000630416.2
3UTR-3UTR CAA 90 bp TTTCTTGGAATAAACTGGGCCATGAGAAAGCTATATACTTGGACCATATTAGCTGGCGTGGTTGCACTCTaGGAGATGGTGGAGAGAACT +
Preference number: 3 (lower is better)
Translates to: FLGINWAMRKLYTWTILAGVVAL*EMVERT
Trigger: AGTTCTCTCCACCATCTCCAAGAGTGCAACCACGCC...AGCTAATATGGTCCAAGTATATAGCTTTCTCATGGCCCAGTTTATTCCAAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630416.2
3UTR-3UTR CAA 90 bp GTTGCACTCTTGGAGATGGTGGAGAGAACTGGATCTTTTGAAAGATTCGGGGCATCATTGTTAGGACAGTaGTTACTCAGCTGCCAAATT +
Preference number: 3 (lower is better)
Translates to: VALLEMVERTGSFERFGASLLGQ*LLSCQI
Trigger: AATTTGGCAGCTGAGTAACAACTGTCCTAACAATGA...TGCCCCGAATCTTTCAAAAGATCCAGTTCTCTCCACCATCTCCAAGAGTGCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513005.5
3UTR TCA 72 bp ATAGAGCCTTTGTTCATGATCACTGCTCAGATGGTCTaGAAAGCAGTAACAGCAGGGGCTACTGAATTAGTC +
Preference number: 3 (lower is better)
Translates to: IEPLFMITAQMV*KAVTAGATELV
Trigger: GACTAATTCAGTAGCCCCTGCTGTTACTGCTTTTCAGACCATCTGAGCAGTGATCATGAACAAAGGCTCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507460.1
3UTR CCA 72 bp CATTCCTACATGCCATCCAACCTCAGTGGACAAGGTTaGATCGTGAGCAAGATACATGATCGAGAGATAAAA +
Preference number: 3 (lower is better)
Translates to: HSYMPSNLSGQG*IVSKIHDREIK
Trigger: TTTTATCTCTCGATCATGTATCTTGCTCACGATCCAACCTTGTCCACTGAGGTTGGATGGCATGTAGGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507460.1
3UTR CCA 72 bp GACATGTTCGCAAAAATCAAAAGGCACATGGGAAGTTaGCCACTAATGAACACCCAACATATGCTGGGTACT +
Preference number: 3 (lower is better)
Translates to: DMFAKIKRHMGS*PLMNTQHMLGT
Trigger: AGTACCCAGCATATGTTGGGTGTTCATTAGTGGCCAACTTCCCATGTGCCTTTTGATTTTTGCGAACATGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507460.1
3UTR CCA 72 bp GAAGTTAAACATGTGTATATGGTTTCCTTTGAACAATaGACTGTGGGCAGAGGGACATTGTGTCACATCTGG +
Preference number: 3 (lower is better)
Translates to: EVKHVYMVSFEQ*TVGRGTLCHIW
Trigger: CCAGATGTGACACAATGTCCCTCTGCCCACAGTCCATTGTTCAAAGGAAACCATATACACATGTTTAACTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507460.1
3UTR CCA 72 bp CCTGTGTCACCAAACAGTTTGTATAATCAGTCACTATaGAAGATGACTTGCACCCTGAGAAATGGGTTCTAC +
Preference number: 3 (lower is better)
Translates to: PVSPNSLYNQSL*KMTCTLRNGFY
Trigger: GTAGAACCCATTTCTCAGGGTGCAAGTCATCTTCCATAGTGACTGATTATACAAACTGTTTGGTGACACAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507460.1
3UTR-3UTR CAA 90 bp TCAACCCTTACCAAAACCTCTTCTGGTATACAAAGCTGTTGTAAATTTGAGTCAAGGGTCCACAAAGGGTaGTACAGGATCCCCATTTTC +
Preference number: 3 (lower is better)
Translates to: STLTKTSSGIQSCCKFESRVHKG*YRIPIF
Trigger: GAAAATGGGGATCCTGTACAACCCTTTGTGGACCCT...TGACTCAAATTTACAACAGCTTTGTATACCAGAAGAGGTTTTGGTAAGGGTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
3UTR-3UTR CAA 90 bp TTTCTTGGAATAAACTGGGCCATGAGAAAGCTATATACTTGGACCATATTAGCTAGGGTCCACAAAGGGTaGTACAGGATCCCCATTTTC +
Preference number: 3 (lower is better)
Translates to: FLGINWAMRKLYTWTILARVHKG*YRIPIF
Trigger: GAAAATGGGGATCCTGTACAACCCTTTGTGGACCCT...AGCTAATATGGTCCAAGTATATAGCTTTCTCATGGCCCAGTTTATTCCAAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630416.2
3UTR-3UTR CAA 90 bp AGATGGCATGTTATCATCTTCATGAAGTATCTATTCCTACCTAATAAAGGGGCAGGAGAGCATTTGAGTTaGGGTCCCTTTGTTCTGGCT +
Preference number: 3 (lower is better)
Translates to: RWHVIIFMKYLFLPNKGAGEHLS*GPFVLA
Trigger: AGCCAGAACAAAGGGACCCAAACTCAAATGCTCTCC...TGCCCCTTTATTAGGTAGGAATAGATACTTCATGAAGATGATAACATGCCATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507460.1
3UTR-3UTR CAA 90 bp AATGAGCATCCATTGGGAAATCCTCCAAGTGCATTGGGCATTCAGCTTGAACTGTCTGGAGTCCAGATTTaGCTAGCCATTAAATTGTTT +
Preference number: 3 (lower is better)
Translates to: NEHPLGNPPSALGIQLELSGVQI*LAIKLF
Trigger: AAACAATTTAATGGCTAGCAAAATCTGGACTCCAGA...CAGTTCAAGCTGAATGCCCAATGCACTTGGAGGATTTCCCAATGGATGCTCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000513005.5
ENST00000514193.5
ENST00000630416.2
3UTR GCA 72 bp CAGTGGGAGTTTTTGGCACAATTTTCTAATCCAATATaGATGTTGCTCCACAGCAACCAAACTGGATGCTTT +
Preference number: 3 (lower is better)
Translates to: QWEFLAQFSNPI*MLLHSNQTGCF
Trigger: AAAGCATCCAGTTTGGTTGCTGTGGAGCAACATGCATATTGGATTAGAAAATTGTGCCAAAAACTCCCACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
3UTR GCA 72 bp TATTCCTGGGAGCTTTGGAAAAAGGGCATACAGCACTaGCTTCTAACACCAAGAAAAGAGAAGGTACATAAA +
Preference number: 3 (lower is better)
Translates to: YSWELWKKGIQH*LLTPRKEKVHK
Trigger: TTTATGTACCTTCTCTTTTCTTGGTGTTAGAAGGCAGTGCTGTATGCCCTTTTTCCAAAGCTCCCAGGAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507460.1
3UTR CCA 72 bp TACTTTGGTGCTCTTCTGGAATCCATGATTATATCATaGCAGGGTTTGTGTCCCTCAACCAGGAATTCAAAA +
Preference number: 3 (lower is better)
Translates to: YFGALLESMIIS*QGLCPSTRNSK
Trigger: TTTTGAATTCCTGGTTGAGGGACACAAACCCTGCCATGATATAATCATGGATTCCAGAAGAGCACCAAAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381620.9
3UTR-3UTR CAA 90 bp AGTTTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCACAGAGAACTGGATCTTTaGAAAGATTCGGGGCATAAT +
Preference number: 3 (lower is better)
Translates to: SFSYVYQASNYISRDSEHRELDL*KDSGHN
Trigger: ATTATGCCCCGAATCTTTCAAAAGATCCAGTTCTCT...GTGCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAAACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000630416.2
3UTR-3UTR CAA 90 bp CATAATCAATTGACAAATGGTGAATTCTACATACTGTGCCAAGCACTAAGGACAACTATGGAAGATGACTaGCACCCTGAGAAATGGGTT +
Preference number: 3 (lower is better)
Translates to: HNQLTNGEFYILCQALRTTMEDD*HPEKWV
Trigger: AACCCATTTCTCAGGGTGCAAGTCATCTTCCATAGT...TGTCCTTAGTGCTTGGCACAGTATGTAGAATTCACCATTTGTCAATTGATTATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507460.1
3UTR-3UTR CAA 90 bp GTTTTTCAAGCTCCAAAGCCTGATCTTTTCCAAAGTACACTATATTGTGTCTCAGAGAAGGATGACTCGTaGTTAGCAATGTCAGAAGTC +
Preference number: 3 (lower is better)
Translates to: VFQAPKPDLFQSTLYCVSEKDDS*LAMSEV
Trigger: GACTTCTGACATTGCTAACAACGAGTCATCCTTCTC...TGAGACACAATATAGTGTACTTTGGAAAAGATCAGGCTTTGGAGCTTGAAAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507460.1
3UTR-3UTR CAA 90 bp CATGGTATACAGCAGAGTCCCATCATCCTGAATTCGAAGCAACTTATTTGGCATTCTGGAGTCCAGATTTaGCTAGCCATTAAATTGTTT +
Preference number: 3 (lower is better)
Translates to: HGIQQSPIILNSKQLIWHSGVQI*LAIKLF
Trigger: AAACAATTTAATGGCTAGCAAAATCTGGACTCCAGA...ATGCCAAATAAGTTGCTTCGAATTCAGGATGATGGGACTCTGCTGTATACCATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000513005.5
ENST00000514193.5
ENST00000630416.2
3UTR TCA 72 bp GAAACCATCATTTTTAACCAGAACCTTGAAAACAGATaGCTCAGTCCAGTGTTTGGACCATGTGCATCAGAA +
Preference number: 3 (lower is better)
Translates to: ETIIFNQNLENR*LSPVFGPCASE
Trigger: TTCTGATGCACATGGTCCAAACACTGGACTGAGTCATCTGTTTTCAAGGTTCTGGTTAAAAATGATGGTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507460.1
3UTR TCA 72 bp TCAGATGGTCTGAAAAGCAGTAACAGCAGGGGCTACTaGATTAGTCCATTTCACTATATTAAATCCAGGTTC +
Preference number: 3 (lower is better)
Translates to: SDGLKSSNSRGY*ISPFHYIKSRF
Trigger: GAACCTGGATTTAATATAGTGAAATGGACTAATTCAGTAGCCCCTGCTGTTACTGCTTTTCAGACCATCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507460.1
3UTR CCA 72 bp CATGGTAAGAACATGCTCAAACCAGAATACAAACCCTaGTTTTTCAAGCTCCAAAGCCTGATCTTTTCCAAA +
Preference number: 3 (lower is better)
Translates to: HGKNMLKPEYKP*FFKLQSLIFSK
Trigger: TTTGGAAAAGATCAGGCTTTGGAGCTTGAAAAACCAGGGTTTGTATTCTGGTTTGAGCATGTTCTTACCATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507460.1
3UTR-3UTR CAA 90 bp AGGTTCCTCACATTCTCTCTGCATGTGATCGTATTATTAATTTGTAGCAAAGGAAATCCAATATGCATGTaGCTCCACAGCAACCAAACT +
Preference number: 3 (lower is better)
Translates to: RFLTFSLHVIVLLICSKGNPICM*LHSNQT
Trigger: AGTTTGGTTGCTGTGGAGCAACATGCATATTGGATT...TCCTTTGCTACAAATTAATAATACGATCACATGCAGAGAGAATGTGAGGAACCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381620.9
3UTR-3UTR CAA 90 bp TGGGTCTCAATTCAAGGACTGACCCCTAATACAGGTTCTCTGTTTAAATATGTAAGAGAACTGGATCTTTaGAAAGATTCGGGGCATAAT +
Preference number: 3 (lower is better)
Translates to: WVSIQGLTPNTGSLFKYVRELDL*KDSGHN
Trigger: ATTATGCCCCGAATCTTTCAAAAGATCCAGTTCTCT...TACATATTTAAACAGAGAACCTGTATTAGGGGTCAGTCCTTGAATTGAGACCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000510233.5
ENST00000513005.5
ENST00000630416.2
3UTR-3UTR CAA 90 bp CATAATCAATTGACAAATGGTGAATTCTACATACTGTGCCAAGCACTAAGGACATGTATATGGTTTCCTTaGAACAATGGACTGTGGGCA +
Preference number: 3 (lower is better)
Translates to: HNQLTNGEFYILCQALRTCIWFP*NNGLWA
Trigger: TGCCCACAGTCCATTGTTCAAAGGAAACCATATACA...TGTCCTTAGTGCTTGGCACAGTATGTAGAATTCACCATTTGTCAATTGATTATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507460.1
3UTR-3UTR CAA 90 bp CTGATCTTTTCCAAAGTACACTATATTGTGTCTCATAAGATGTACATGGGTCAATTATTCCTGGGAGCTTaGGAAAAAGGGCATACAGCA +
Preference number: 3 (lower is better)
Translates to: LIFSKVHYIVSHKMYMGQLFLGA*EKGHTA
Trigger: TGCTGTATGCCCTTTTTCCAAAGCTCCCAGGAATAA...TTGACCCATGTACATCTTATGAGACACAATATAGTGTACTTTGGAAAAGATCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507460.1
3UTR TCA 72 bp TGGATAGAATATCCATGCCATCACAAAATAATTAGGTaGCAAAAGGCAAGTAATTGGTCTGCGGCTCTCATT +
Preference number: 3 (lower is better)
Translates to: WIEYPCHHKIIR*QKASNWSAALI
Trigger: AATGAGAGCCGCAGACCAATTACTTGCCTTTTGTCACCTAATTATTTTGTGATGGCATGGATATTCTATCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507460.1
3UTR TCA 72 bp AGGCAGTCTAGTCATAAGGATGCTATAAAGATTATGTaGGAGAGCATATGTAAAACACTTAGCACAGTGCCT +
Preference number: 3 (lower is better)
Translates to: RQSSHKDAIKIM*ESICKTLSTVP
Trigger: AGGCACTGTGCTAAGTGTTTTACATATGCTCTCTCACATAATCTTTATAGCATCCTTATGACTAGACTGCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515082.5
3UTR CCA 72 bp TGCATACCATATAGAGCAATTTCATTGCTTGCCTTCTaGCATTGTGTACTTCCTTATACAATTGCACACATC +
Preference number: 3 (lower is better)
Translates to: CIPYRAISLLAF*HCVLPYTIAHI
Trigger: GATGTGTGCAATTGTATAAGGAAGTACACAATGCCAGAAGGCAAGCAATGAAATTGCTCTATATGGTATGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381620.9
3UTR-3UTR CAA 90 bp TGGCAAATTCCGTTAATAAGTTGCATTTGTGACCTTGGTTTTATACAAGCATGCCATCAGTGGGAGTTTTaGGCACAATTTTCTAATCCA +
Preference number: 3 (lower is better)
Translates to: WQIPLISCICDLGFIQACHQWEF*AQFSNP
Trigger: TGGATTAGAAAATTGTGCCAAAAACTCCCACTGATG...GCATGCTTGTATAAAACCAAGGTCACAAATGCAACTTATTAACGGAATTTGCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
3UTR-3UTR CAA 90 bp AGATGGCATGTTATCATCTTCATGAAGTATCTATTCCTACCTAATAAAGGGGCAAGAAATGGGTTCTACTaGCCAAGTGTGGTAGTTATT +
Preference number: 3 (lower is better)
Translates to: RWHVIIFMKYLFLPNKGARNGFY*PSVVVI
Trigger: AATAACTACCACACTTGGCAAGTAGAACCCATTTCT...TGCCCCTTTATTAGGTAGGAATAGATACTTCATGAAGATGATAACATGCCATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507460.1
3UTR-3UTR CAA 90 bp AGATGGCATGTTATCATCTTCATGAAGTATCTATTCCTACCTAATAAAGGGGCAGTGTCACCAAACAGTTaGTATAATCAGTCACTATGG +
Preference number: 3 (lower is better)
Translates to: RWHVIIFMKYLFLPNKGAVSPNS*YNQSLW
Trigger: CCATAGTGACTGATTATACAAACTGTTTGGTGACAC...TGCCCCTTTATTAGGTAGGAATAGATACTTCATGAAGATGATAACATGCCATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507460.1
3UTR-3UTR CAA 90 bp GTTTTTCAAGCTCCAAAGCCTGATCTTTTCCAAAGTACACTATATTGTGTCTCATTACTGTCACGGAGGTaGAAATTTCAGACTAACACT +
Preference number: 3 (lower is better)
Translates to: VFQAPKPDLFQSTLYCVSLLSRR*KFQTNT
Trigger: AGTGTTAGTCTGAAATTTCAACCTCCGTGACAGTAA...TGAGACACAATATAGTGTACTTTGGAAAAGATCAGGCTTTGGAGCTTGAAAAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507460.1
3UTR-3UTR CAA 90 bp AGATGGCATGTTATCATCTTCATGAAGTATCTATTCCTACCTAATAAAGGGGCATCATTGATACCACCTTaGTTTGATTTGAGGGTGCTT +
Preference number: 3 (lower is better)
Translates to: RWHVIIFMKYLFLPNKGASLIPP*FDLRVL
Trigger: AAGCACCCTCAAATCAAACAAAGGTGGTATCAATGA...TGCCCCTTTATTAGGTAGGAATAGATACTTCATGAAGATGATAACATGCCATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507460.1
3UTR-3UTR CAA 90 bp AGATGGCATGTTATCATCTTCATGAAGTATCTATTCCTACCTAATAAAGGGGCAGTAAGATCCCAAGCCTaGGAATCAAAGAGATCTAAA +
Preference number: 3 (lower is better)
Translates to: RWHVIIFMKYLFLPNKGAVRSQA*ESKRSK
Trigger: TTTAGATCTCTTTGATTCCAAGGCTTGGGATCTTAC...TGCCCCTTTATTAGGTAGGAATAGATACTTCATGAAGATGATAACATGCCATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507460.1
3UTR TCA 72 bp TGCTTTTTCCAGTCTCCAGCACCCGTAAAATTTAGCTaGTCAATTTCAATACAACACATACCTGGAAATGTT +
Preference number: 3 (lower is better)
Translates to: CFFQSPAPVKFS*SISIQHIPGNV
Trigger: AACATTTCCAGGTATGTGTTGTATTGAAATTGATCAGCTAAATTTTACGGGTGCTGGAGACTGGAAAAAGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
3UTR TCA 72 bp AATCATATAAGTGTTTGTCATAGTGTGGGGCACCTATaGATTCTCATCAGTGGGAGTTTTTGGCACAATTTT +
Preference number: 3 (lower is better)
Translates to: NHISVCHSVGHL*ILISGSFWHNF
Trigger: AAAATTGTGCCAAAAACTCCCACTGATGAGAATTCATAGGTGCCCCACACTATGACAAACACTTATATGATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
3UTR GCA 72 bp TCAAGGCTGTCTTCTTGGCAAATTCCGTTAATAAGTTaGATTTGTGACCTTGGTTTTATACAAGCATGCAAA +
Preference number: 3 (lower is better)
Translates to: SRLSSWQIPLIS*ICDLGFIQACK
Trigger: TTTGCATGCTTGTATAAAACCAAGGTCACAAATGCAACTTATTAACGGAATTTGCCAAGAAGACAGCCTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
3UTR CCA 72 bp TCCATCCACTTCTCTAAGTACTCTAAAGTCTTTTCTTaGAATAAACTGGGCCATGAGAAAGCTATATACTTG +
Preference number: 3 (lower is better)
Translates to: SIHFSKYSKVFS*NKLGHEKAIYL
Trigger: CAAGTATATAGCTTTCTCATGGCCCAGTTTATTCCAAGAAAAGACTTTAGAGTACTTAGAGAAGTGGATGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630416.2
3UTR-3UTR CAA 90 bp GAACTGCTTTCACAAGAGAAAAATGTGCCAATTAACTGCCCTTTCCTTTATAATCATCAGTGGGAGTTTTaGGCACAATTTTCTAATCCA +
Preference number: 3 (lower is better)
Translates to: ELLSQEKNVPINCPFLYNHQWEF*AQFSNP
Trigger: TGGATTAGAAAATTGTGCCAAAAACTCCCACTGATG...ATTATAAAGGAAAGGGCAGTTAATTGGCACATTTTTCTCTTGTGAAAGCAGTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
3UTR-3UTR CAA 90 bp TCCCATCATCCTGAATTCGAAGCAACTTATTTGGCATTGTCATATTATGAGCTATCTGGAGTCCAGATTTaGCTAGCCATTAAATTGTTT +
Preference number: 3 (lower is better)
Translates to: SHHPEFEATYLALSYYELSGVQI*LAIKLF
Trigger: AAACAATTTAATGGCTAGCAAAATCTGGACTCCAGA...TAGCTCATAATATGACAATGCCAAATAAGTTGCTTCGAATTCAGGATGATGGGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000513005.5
ENST00000514193.5
ENST00000630416.2
3UTR-3UTR CAA 90 bp GCTACTGAATTTAAGGTTCAGCAGACCAATTTAACCCATCTATCAATCAACATTTCAAGTGTGATTTGTTaGGGAAGCACAGATTTTGTT +
Preference number: 3 (lower is better)
Translates to: ATEFKVQQTNLTHLSINISSVIC*GSTDFV
Trigger: AACAAAATCTGTGCTTCCCAAACAAATCACACTTGA...AATGTTGATTGATAGATGGGTTAAATTGGTCTGCTGAACCTTAAATTCAGTAGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507460.1
3UTR-3UTR CAA 90 bp CTGATCTTTTCCAAAGTACACTATATTGTGTCTCATAAGATGTACATGGGTCAAAAGTACCAATGTACTTaGTACCAAGAAATGCTGAGA +
Preference number: 3 (lower is better)
Translates to: LIFSKVHYIVSHKMYMGQKYQCT*YQEMLR
Trigger: TCTCAGCATTTCTTGGTACAAAGTACATTGGTACTT...TTGACCCATGTACATCTTATGAGACACAATATAGTGTACTTTGGAAAAGATCAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507460.1
3UTR TCA 72 bp CCTGTATTCAAGTCTGGATATACGTCAAACTCAGGATaGCCAAGAAATGCAATAATAAGAACACCTAAACAA +
Preference number: 3 (lower is better)
Translates to: PVFKSGYTSNSG*PRNAIIRTPKQ
Trigger: TTGTTTAGGTGTTCTTATTATTGCATTTCTTGGTCATCCTGAGTTTGACGTATATCCAGACTTGAATACAGG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507460.1
3UTR TCA 72 bp GTACTGAATCAGATGCATTGTAAGTCCAAATATAAGTaGCCTCTGAAGTTGTATATGCATAGCTGCCAAATT +
Preference number: 3 (lower is better)
Translates to: VLNQMHCKSKYK*PLKLYMHSCQI
Trigger: AATTTGGCAGCTATGCATATACAACTTCAGAGGTCACTTATATTTGGACTTACAATGCATCTGATTCAGTAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630416.2
3UTR GCA 72 bp TCTACAGAGTATGAAAGGAAACAGCTGTTATATCAATaGACAAATCTCCCATTAGATTCAGTACTTGAAACC +
Preference number: 3 (lower is better)
Translates to: STEYERKQLLYQ*TNLPLDSVLET
Trigger: GGTTTCAAGTACTGAATCTAATGGGAGATTTGTGCATTGATATAACAGCTGTTTCCTTTCATACTCTGTAGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515082.5
3UTR TCA 72 bp TATTTAACTTTTAGAAGAGCTTACACAAGCCTCCGTTaGGAAACCTGGCATTCAAAGATGTTTCTATTCTAT +
Preference number: 3 (lower is better)
Translates to: YLTFRRAYTSLR*ETWHSKMFLFY
Trigger: ATAGAATAGAAACATCTTTGAATGCCAGGTTTCTCAACGGAGGCTTGTGTAAGCTCTTCTAAAAGTTAAATA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381620.9
CDS-3UTR CCA 90 bp CAGCTGGCTTGTTTTCTGGCTTCTTGTTGGGTTCTGGCGTGGTTGCACTCTTGGGCGTGGTTGCACTCTTaGAGATGGTGGAGAGAACTG +
Preference number: 4 (lower is better)
Translates to: QLACFLASCWVLAWLHSWAWLHS*RWWREL
Trigger: CAGTTCTCTCCACCATCTCCAAGAGTGCAACCACGC...CCAAGAGTGCAACCACGCCAGAACCCAACAAGAAGCCAGAAAACAAGCCAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000510233.5
ENST00000513005.5
ENST00000630416.2
CDS-3UTR CCA 90 bp CAGCTGGCTTGTTTTCTGGCTTCTTGTTGGGTTCTGGCGTGGTTGCACTCTTGGCTTCTTGTTGGGTTCTaGCGTGGTTGCACTCTTGGA +
Preference number: 4 (lower is better)
Translates to: QLACFLASCWVLAWLHSWLLVGF*RGCTLG
Trigger: TCCAAGAGTGCAACCACGCCAGAACCCAACAAGAAG...CCAAGAGTGCAACCACGCCAGAACCCAACAAGAAGCCAGAAAACAAGCCAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000510233.5
ENST00000513005.5
ENST00000630416.2
CDS-3UTR GCA 90 bp CGGGGCATAATTGGCAACAGCCACTGCATAAGCGTTGTTCTGTATCATAACGGAGGGTTCTGGCGTGGTTaGACTCTTGGAGATGGTGGA +
Preference number: 4 (lower is better)
Translates to: RGIIGNSHCISVVLYHNGGFWRG*TLGDGG
Trigger: TCCACCATCTCCAAGAGTGCAACCACGCCAGAACCC...TCCGTTATGATACAGAACAACGCTTATGCAGTGGCTGTTGCCAATTATGCCCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000510233.5
ENST00000513005.5
ENST00000630416.2
CDS-3UTR CCA 90 bp GGTTCTGGCGTGGTTGCACTCTTGGAGATGGTGGAGAGAACTGGATCTTTTGAAGCGTGGTTGCACTCTTaGAGATGGTGGAGAGAACTG +
Preference number: 4 (lower is better)
Translates to: GSGVVALLEMVERTGSFEAWLHS*RWWREL
Trigger: CAGTTCTCTCCACCATCTCCAAGAGTGCAACCACGC...TTCAAAAGATCCAGTTCTCTCCACCATCTCCAAGAGTGCAACCACGCCAGAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000510233.5
ENST00000513005.5
ENST00000630416.2
CDS-3UTR CCA 90 bp CAGCTGGCTTGTTTTCTGGCTTCTTGTTGGGTTCTGGCGTGGTTGCACTCTTGGAGCTGGCTTGTTTTCTaGCTTCTTGTTGGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: QLACFLASCWVLAWLHSWSWLVF*LLVGFW
Trigger: CCAGAACCCAACAAGAAGCCAGAAAACAAGCCAGCT...CCAAGAGTGCAACCACGCCAGAACCCAACAAGAAGCCAGAAAACAAGCCAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000510233.5
ENST00000513005.5
ENST00000630416.2
CDS-3UTR CCA 90 bp CTCATCAGTGGGAGTTTTTGGCACAATTTTCTAATCCAATATGCATGTTGCTCCGGAGCGATGGGCTGGTaGAAGCCGGAGAGGAGCGCT +
Preference number: 4 (lower is better)
Translates to: LISGSFWHNFLIQYACCSGAMGW*KPERSA
Trigger: AGCGCTCCTCTCCGGCTTCCACCAGCCCATCGCTCC...GGAGCAACATGCATATTGGATTAGAAAATTGTGCCAAAAACTCCCACTGATGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381620.9
CDS-3UTR CCA 90 bp AAAGTACTTTGGTGCTCTTCTGGAATCCATGATTATATCATGGCAGGGTTTGTGCGTGGAGCGATGGGCTaGTGGAAGCCGGAGAGGAGC +
Preference number: 4 (lower is better)
Translates to: KVLWCSSGIHDYIMAGFVRGAMG*WKPERS
Trigger: GCTCCTCTCCGGCTTCCACCAGCCCATCGCTCCACG...CACAAACCCTGCCATGATATAATCATGGATTCCAGAAGAGCACCAAAGTACTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381620.9
CDS-3UTR CCA 90 bp TTGAACAATGGACTGTGGGCAGAGGGACATTGTGTCACATCTGGGCAGAAGCTTCTGGAGATTCCACTCTaGAAACTCCCAGTCCTGGTC +
Preference number: 4 (lower is better)
Translates to: LNNGLWAEGHCVTSGQKLLEIPL*KLPVLV
Trigger: GACCAGGACTGGGAGTTTCCAGAGTGGAATCTCCAG...AAGCTTCTGCCCAGATGTGACACAATGTCCCTCTGCCCACAGTCCATTGTTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR TCA 90 bp CAGCTGGCTTGTTTTCTGGCTTCTTGTTGGGTTCTGGCGTGGTTGCACTCTTGGATTGGGCATTCAGCTTaGACTGTAAGCCTCATGGTA +
Preference number: 4 (lower is better)
Translates to: QLACFLASCWVLAWLHSWIGHSA*TVSLMV
Trigger: TACCATGAGGCTTACAGTTCAAGCTGAATGCCCAAT...CCAAGAGTGCAACCACGCCAGAACCCAACAAGAAGCCAGAAAACAAGCCAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000513005.5
ENST00000630416.2
CDS-3UTR TCA 90 bp CAGCTGGCTTGTTTTCTGGCTTCTTGTTGGGTTCTGGCGTGGTTGCACTCTTGGTCTCAATTCAAGGACTaGCCCCTAATACAGGTTCTC +
Preference number: 4 (lower is better)
Translates to: QLACFLASCWVLAWLHSWSQFKD*PLIQVL
Trigger: GAGAACCTGTATTAGGGGTCAGTCCTTGAATTGAGA...CCAAGAGTGCAACCACGCCAGAACCCAACAAGAAGCCAGAAAACAAGCCAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000510233.5
ENST00000513005.5
ENST00000630416.2
CDS-3UTR GCA 90 bp TTGAACAATGGACTGTGGGCAGAGGGACATTGTGTCACATCTGGGCAGAAGCTTAATAATTTCCCTTCCTaGCCACCCACGGTTGCCCAA +
Preference number: 4 (lower is better)
Translates to: LNNGLWAEGHCVTSGQKLNNFPS*PPTVAQ
Trigger: TTGGGCAACCGTGGGTGGGCAGGAAGGGAAATTATT...AAGCTTCTGCCCAGATGTGACACAATGTCCCTCTGCCCACAGTCCATTGTTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR GCA 90 bp GGCGTGGTTGCACTCTTGGAGATGGTGGAGAGAACTGGATCTTTTGAAAGATTCCCAGTCCATGGCAGTTaGATAAGCCACTTTGGGGAG +
Preference number: 4 (lower is better)
Translates to: GVVALLEMVERTGSFERFPVHGS*ISHFGE
Trigger: CTCCCCAAAGTGGCTTATGCAACTGCCATGGACTGG...GAATCTTTCAAAAGATCCAGTTCTCTCCACCATCTCCAAGAGTGCAACCACGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000510233.5
ENST00000513005.5
ENST00000630416.2
CDS-3UTR CCA 90 bp CAGCTGGCTTGTTTTCTGGCTTCTTGTTGGGTTCTGGCGTGGTTGCACTCTTGGCACTCTTGGAGATGGTaGAGAGAACTGGATCTTTTG +
Preference number: 4 (lower is better)
Translates to: QLACFLASCWVLAWLHSWHSWRW*RELDLL
Trigger: CAAAAGATCCAGTTCTCTCCACCATCTCCAAGAGTG...CCAAGAGTGCAACCACGCCAGAACCCAACAAGAAGCCAGAAAACAAGCCAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000510233.5
ENST00000513005.5
ENST00000630416.2
CDS-3UTR CCA 90 bp GGCGTGGTTGCACTCTTGGAGATGGTGGAGAGAACTGGATCTTTTGAAAGATTCGCGTGGTTGCACTCTTaGAGATGGTGGAGAGAACTG +
Preference number: 4 (lower is better)
Translates to: GVVALLEMVERTGSFERFAWLHS*RWWREL
Trigger: CAGTTCTCTCCACCATCTCCAAGAGTGCAACCACGC...GAATCTTTCAAAAGATCCAGTTCTCTCCACCATCTCCAAGAGTGCAACCACGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000510233.5
ENST00000513005.5
ENST00000630416.2
CDS-3UTR CCA 90 bp CGGGGCATAATTGGCAACAGCCACTGCATAAGCGTTGTTCTGTATCATAACGGATGTTGGGTTCTGGCGTaGTTGCACTCTTGGAGATGG +
Preference number: 4 (lower is better)
Translates to: RGIIGNSHCISVVLYHNGCWVLA*LHSWRW
Trigger: CCATCTCCAAGAGTGCAACCACGCCAGAACCCAACA...TCCGTTATGATACAGAACAACGCTTATGCAGTGGCTGTTGCCAATTATGCCCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000510233.5
ENST00000513005.5
ENST00000630416.2
CDS-3UTR CCA 90 bp GTTCTGGCGTGGTTGCACTCTTGGAGATGGTGGAGAGAACTGGATCTTTTGAAATGTTGGGTTCTGGCGTaGTTGCACTCTTGGAGATGG +
Preference number: 4 (lower is better)
Translates to: VLAWLHSWRWWRELDLLKCWVLA*LHSWRW
Trigger: CCATCTCCAAGAGTGCAACCACGCCAGAACCCAACA...TTTCAAAAGATCCAGTTCTCTCCACCATCTCCAAGAGTGCAACCACGCCAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000510233.5
ENST00000513005.5
ENST00000630416.2
CDS-3UTR CCA 90 bp GGTTCTGGCGTGGTTGCACTCTTGGAGATGGTGGAGAGAACTGGATCTTTTGAACTTCTTGTTGGGTTCTaGCGTGGTTGCACTCTTGGA +
Preference number: 4 (lower is better)
Translates to: GSGVVALLEMVERTGSFELLVGF*RGCTLG
Trigger: TCCAAGAGTGCAACCACGCCAGAACCCAACAAGAAG...TTCAAAAGATCCAGTTCTCTCCACCATCTCCAAGAGTGCAACCACGCCAGAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000510233.5
ENST00000513005.5
ENST00000630416.2
CDS-3UTR CCA 90 bp GGTTCTGGCGTGGTTGCACTCTTGGAGATGGTGGAGAGAACTGGATCTTTTGAATTTCTGGCTTCTTGTTaGGTTCTGGCGTGGTTGCAC +
Preference number: 4 (lower is better)
Translates to: GSGVVALLEMVERTGSFEFLASC*VLAWLH
Trigger: GTGCAACCACGCCAGAACCCAACAAGAAGCCAGAAA...TTCAAAAGATCCAGTTCTCTCCACCATCTCCAAGAGTGCAACCACGCCAGAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000510233.5
ENST00000513005.5
ENST00000630416.2
CDS-3UTR CCA 90 bp AGCTGGCTTGTTTTCTGGCTTCTTGTTGGGTTCTGGCGTGGTTGCACTCTTGGAAGCTGGCTTGTTTTCTaGCTTCTTGTTGGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: SWLVFWLLVGFWRGCTLGSWLVF*LLVGFW
Trigger: CCAGAACCCAACAAGAAGCCAGAAAACAAGCCAGCT...TCCAAGAGTGCAACCACGCCAGAACCCAACAAGAAGCCAGAAAACAAGCCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000510233.5
ENST00000513005.5
ENST00000630416.2
CDS-3UTR CCA 90 bp TTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCACTCAGAGAGCGTGGAGCGATaGGCTGGTGGAAGCCGGAGA +
Preference number: 4 (lower is better)
Translates to: FSYVYQASNYISRDSEHSESVER*AGGSRR
Trigger: TCTCCGGCTTCCACCAGCCCATCGCTCCACGCTCTC...TGAGTGCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381620.9
ENST00000540012.5
3UTR CAA 72 bp GCTTGTTTTCTGGCTTCTTGTTGGGTTCTGGCGTGGTaGCACTCTTGGAGATGGTGGAGAGAACTGGATCTT +
Preference number: 4 (lower is better)
Translates to: ACFLASCWVLAW*HSWRWWRELDL
Trigger: AAGATCCAGTTCTCTCCACCATCTCCAAGAGTGCAACCACGCCAGAACCCAACAAGAAGCCAGAAAACAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000510233.5
ENST00000513005.5
ENST00000630416.2
3UTR CAA 72 bp TTCTTTGCTTCAGCTGGCTTGTTTTCTGGCTTCTTGTaGGGTTCTGGCGTGGTTGCACTCTTGGAGATGGTG +
Preference number: 4 (lower is better)
Translates to: FFASAGLFSGFL*GSGVVALLEMV
Trigger: CACCATCTCCAAGAGTGCAACCACGCCAGAACCCAACAAGAAGCCAGAAAACAAGCCAGCTGAAGCAAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000510233.5
ENST00000513005.5
ENST00000630416.2
CDS-3UTR TCA 90 bp CGGGGCATAATTGGCAACAGCCACTGCATAAGCGTTGTTCTGTATCATAACGGATGTCTCCTTTCCGATTaGTTGGCCCAGCAGGTCATA +
Preference number: 4 (lower is better)
Translates to: RGIIGNSHCISVVLYHNGCLLSD*LAQQVI
Trigger: TATGACCTGCTGGGCCAATCAATCGGAAAGGAGACA...TCCGTTATGATACAGAACAACGCTTATGCAGTGGCTGTTGCCAATTATGCCCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630416.2
CDS-3UTR TCA 90 bp ACAAAGGGAAATGAAGCAGTTGTAACTCAATGCATCTGGAAAGAGGGTTCTTGCCCGCCGCTATTACAGTaGACTGCGGTCCTCACGTCT +
Preference number: 4 (lower is better)
Translates to: TKGNEAVVTQCIWKEGSCPPLLQ*TAVLTS
Trigger: AGACGTGAGGACCGCAGTTCACTGTAATAGCGGCGG...GCAAGAACCCTCTTTCCAGATGCATTGAGTTACAACTGCTTCATTTCCCTTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR GCA 90 bp CAGCTGGCTTGTTTTCTGGCTTCTTGTTGGGTTCTGGCGTGGTTGCACTCTTGGATTGGCAACAGCCACTaGATAAGCGTTGTTCTGTAT +
Preference number: 4 (lower is better)
Translates to: QLACFLASCWVLAWLHSWIGNSH*ISVVLY
Trigger: ATACAGAACAACGCTTATGCAGTGGCTGTTGCCAAT...CCAAGAGTGCAACCACGCCAGAACCCAACAAGAAGCCAGAAAACAAGCCAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000510233.5
ENST00000513005.5
ENST00000630416.2
CDS-3UTR GCA 90 bp GAACTGGATCTTTTGAAAGATTCGGGGCATAATTGGCAACAGCCACTGCATAAGGGGTTCTGGCGTGGTTaGACTCTTGGAGATGGTGGA +
Preference number: 4 (lower is better)
Translates to: ELDLLKDSGHNWQQPLHKGFWRG*TLGDGG
Trigger: TCCACCATCTCCAAGAGTGCAACCACGCCAGAACCC...CTTATGCAGTGGCTGTTGCCAATTATGCCCCGAATCTTTCAAAAGATCCAGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000510233.5
ENST00000513005.5
ENST00000630416.2
CDS-3UTR CCA 90 bp GGTTCTGGCGTGGTTGCACTCTTGGAGATGGTGGAGAGAACTGGATCTTTTGAAATGGCTGTTTTCGCATaGAGTGCTTTCTGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: GSGVVALLEMVERTGSFEMAVFA*SAFCLQ
Trigger: CTGCAGACAGAAAGCACTCCATGCGAAAACAGCCAT...TTCAAAAGATCCAGTTCTCTCCACCATCTCCAAGAGTGCAACCACGCCAGAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630416.2
CDS-3UTR CCA 90 bp ACCCTTACCAAAACCTCTTCTGGTATACAAAGCTGTTGTAAATTTGAGTCAGCGGCAGCCAAGAGAGCGTaGAGCGATGGGCTGGTGGAA +
Preference number: 4 (lower is better)
Translates to: TLTKTSSGIQSCCKFESAAAKRA*SDGLVE
Trigger: TTCCACCAGCCCATCGCTCCACGCTCTCTTGGCTGC...CGCTGACTCAAATTTACAACAGCTTTGTATACCAGAAGAGGTTTTGGTAAGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381620.9
3UTR CAA 72 bp GTTTTCTTTGCTTCAGCTGGCTTGTTTTCTGGCTTCTaGTTGGGTTCTGGCGTGGTTGCACTCTTGGAGATG +
Preference number: 4 (lower is better)
Translates to: VFFASAGLFSGF*LGSGVVALLEM
Trigger: CATCTCCAAGAGTGCAACCACGCCAGAACCCAACAAGAAGCCAGAAAACAAGCCAGCTGAAGCAAAGAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000510233.5
ENST00000513005.5
ENST00000630416.2
CDS-3UTR TCA 90 bp GGTTCTGGCGTGGTTGCACTCTTGGAGATGGTGGAGAGAACTGGATCTTTTGAATTCAGAGGACATGAATaGGCATCCATTGGGAAATCC +
Preference number: 4 (lower is better)
Translates to: GSGVVALLEMVERTGSFEFRGHE*ASIGKS
Trigger: GGATTTCCCAATGGATGCTCATTCATGTCCTCTGAA...TTCAAAAGATCCAGTTCTCTCCACCATCTCCAAGAGTGCAACCACGCCAGAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000513005.5
ENST00000630416.2
CDS-3UTR TCA 90 bp TTGAACAATGGACTGTGGGCAGAGGGACATTGTGTCACATCTGGGCAGAAGCTTCTGCACTGTCCTTTCTaGTCCTTCATGTCTAAACCT +
Preference number: 4 (lower is better)
Translates to: LNNGLWAEGHCVTSGQKLLHCPF*SFMSKP
Trigger: AGGTTTAGACATGAAGGATCAGAAAGGACAGTGCAG...AAGCTTCTGCCCAGATGTGACACAATGTCCCTCTGCCCACAGTCCATTGTTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR GCA 90 bp CTAGTTTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCGAGAGAGACCGAGACTaGAGCAGCCAAGAGAGCGTG +
Preference number: 4 (lower is better)
Translates to: LVFLMCTKLPITLAGTLSERDRD*SSQESV
Trigger: CACGCTCTCTTGGCTGCTGCAGTCTCGGTCTCTCTC...GCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAAACTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381620.9
ENST00000540012.5
CDS-3UTR CCA 90 bp GGTTCTGGCGTGGTTGCACTCTTGGAGATGGTGGAGAGAACTGGATCTTTTGAATTAGCCTCATCTTCTTaGATGTTAGCCAGCACCAAC +
Preference number: 4 (lower is better)
Translates to: GSGVVALLEMVERTGSFELASSS*MLASTN
Trigger: GTTGGTGCTGGCTAACATCCAAGAAGATGAGGCTAA...TTCAAAAGATCCAGTTCTCTCCACCATCTCCAAGAGTGCAACCACGCCAGAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000510233.5
ENST00000513005.5
ENST00000630416.2
CDS-3UTR CCA 90 bp GTTCTGGCGTGGTTGCACTCTTGGAGATGGTGGAGAGAACTGGATCTTTTGAAAGATTCGGGGCATAATTaGCAACAGCCACTGCATAAG +
Preference number: 4 (lower is better)
Translates to: VLAWLHSWRWWRELDLLKDSGHN*QQPLHK
Trigger: CTTATGCAGTGGCTGTTGCCAATTATGCCCCGAATC...TTTCAAAAGATCCAGTTCTCTCCACCATCTCCAAGAGTGCAACCACGCCAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000510233.5
ENST00000513005.5
ENST00000630416.2
CDS-3UTR CCA 90 bp CAAATGCATGTCTCCATTAAAGGTCTACTGGTAAGCTATGTCACTATATACATAGGAGCGATGGGCTGGTaGAAGCCGGAGAGGAGCGCT +
Preference number: 4 (lower is better)
Translates to: QMHVSIKGLLVSYVTIYIGAMGW*KPERSA
Trigger: AGCGCTCCTCTCCGGCTTCCACCAGCCCATCGCTCC...TATGTATATAGTGACATAGCTTACCAGTAGACCTTTAATGGAGACATGCATTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381620.9
ENST00000540012.5
CDS-3UTR CCA 90 bp ACTGGTAAGCTATGTCACTATATACATACTGTACATGTTGGATCACAAATTAGCCGTGGAGCGATGGGCTaGTGGAAGCCGGAGAGGAGC +
Preference number: 4 (lower is better)
Translates to: TGKLCHYIHTVHVGSQISRGAMG*WKPERS
Trigger: GCTCCTCTCCGGCTTCCACCAGCCCATCGCTCCACG...GCTAATTTGTGATCCAACATGTACAGTATGTATATAGTGACATAGCTTACCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381620.9
ENST00000540012.5
CDS-3UTR CCA 90 bp TCAACCCTTACCAAAACCTCTTCTGGTATACAAAGCTGTTGTAAATTTGAGTCAGAGAGCGTGGAGCGATaGGCTGGTGGAAGCCGGAGA +
Preference number: 4 (lower is better)
Translates to: STLTKTSSGIQSCCKFESESVER*AGGSRR
Trigger: TCTCCGGCTTCCACCAGCCCATCGCTCCACGCTCTC...TGACTCAAATTTACAACAGCTTTGTATACCAGAAGAGGTTTTGGTAAGGGTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381620.9
CDS-3UTR TCA 90 bp GGCGTGGTTGCACTCTTGGAGATGGTGGAGAGAACTGGATCTTTTGAAAGATTCTCTCAATTCAAGGACTaGCCCCTAATACAGGTTCTC +
Preference number: 4 (lower is better)
Translates to: GVVALLEMVERTGSFERFSQFKD*PLIQVL
Trigger: GAGAACCTGTATTAGGGGTCAGTCCTTGAATTGAGA...GAATCTTTCAAAAGATCCAGTTCTCTCCACCATCTCCAAGAGTGCAACCACGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000510233.5
ENST00000513005.5
ENST00000630416.2
CDS-3UTR TCA 90 bp GTTTTTCAAGCTCCAAAGCCTGATCTTTTCCAAAGTACACTATATTGTGTCTCAGCGAAACGACGCGTTTaGCAGCTGCTCTGGAGCCGA +
Preference number: 4 (lower is better)
Translates to: VFQAPKPDLFQSTLYCVSAKRRV*QLLWSR
Trigger: TCGGCTCCAGAGCAGCTGTCAAACGCGTCGTTTCGC...TGAGACACAATATAGTGTACTTTGGAAAAGATCAGGCTTTGGAGCTTGAAAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR TCA 90 bp TTGAACAATGGACTGTGGGCAGAGGGACATTGTGTCACATCTGGGCAGAAGCTTTCAAGCTCCAAAGCCTaGTCTTTTCCAAAGTACACT +
Preference number: 4 (lower is better)
Translates to: LNNGLWAEGHCVTSGQKLSSSKA*SFPKYT
Trigger: AGTGTACTTTGGAAAAGATCAGGCTTTGGAGCTTGA...AAGCTTCTGCCCAGATGTGACACAATGTCCCTCTGCCCACAGTCCATTGTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR GCA 90 bp AGTTTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCACCTGCCCACCCACGGTTaGCCAAGACCAAGTCTTAGA +
Preference number: 4 (lower is better)
Translates to: SFSYVYQASNYISRDSEHLPTHG*PRPSLR
Trigger: TCTAAGACTTGGTCTTGGGCAACCGTGGGTGGGCAG...GTGCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356504.5
ENST00000514090.5
CDS-3UTR GCA 90 bp CTAGTTTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCGGGTTCTGGCGTGGTTaGACTCTTGGAGATGGTGGA +
Preference number: 4 (lower is better)
Translates to: LVFLMCTKLPITLAGTLSGFWRG*TLGDGG
Trigger: TCCACCATCTCCAAGAGTGCAACCACGCCAGAACCC...GCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAAACTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR GCA 90 bp AGATGGCATGTTATCATCTTCATGAAGTATCTATTCCTACCTAATAAAGGGGCAGCCAGGCTAACGTGCTaGCGAGCAGGTGTCCTGGAT +
Preference number: 4 (lower is better)
Translates to: RWHVIIFMKYLFLPNKGAARLTC*RAGVLD
Trigger: ATCCAGGACACCTGCTCGGCAGCACGTTAGCCTGGC...TGCCCCTTTATTAGGTAGGAATAGATACTTCATGAAGATGATAACATGCCATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR GCA 90 bp CATAATCAATTGACAAATGGTGAATTCTACATACTGTGCCAAGCACTAAGGACAAGAGCCAGGCTAACGTaGTGCCGAGCAGGTGTCCTG +
Preference number: 4 (lower is better)
Translates to: HNQLTNGEFYILCQALRTRARLT*CRAGVL
Trigger: CAGGACACCTGCTCGGCAGCACGTTAGCCTGGCTCT...TGTCCTTAGTGCTTGGCACAGTATGTAGAATTCACCATTTGTCAATTGATTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR GCA 90 bp TTGAACAATGGACTGTGGGCAGAGGGACATTGTGTCACATCTGGGCAGAAGCTTGCAGTTGTAACTCAATaGATCTGGAAAGAGGGTTCT +
Preference number: 4 (lower is better)
Translates to: LNNGLWAEGHCVTSGQKLAVVTQ*IWKEGS
Trigger: AGAACCCTCTTTCCAGATGCATTGAGTTACAACTGC...AAGCTTCTGCCCAGATGTGACACAATGTCCCTCTGCCCACAGTCCATTGTTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR GCA 90 bp AATCTCCATTATGCTCCACTCATTCCTTTATTTGTTCTGCCCATGGAGAGCATTGGTATGGGTGTGCTGTaGTCCTTTCTGGAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: NLHYAPLIPLFVLPMESIGMGVL*SFLEPL
Trigger: CAGAGGCTCCAGAAAGGAGCACAGCACACCCATACC...AATGCTCTCCATGGGCAGAACAAATAAAGGAATGAGTGGAGCATAATGGAGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR CCA 90 bp CGGGGCATAATTGGCAACAGCCACTGCATAAGCGTTGTTCTGTATCATAACGGATTAGCCTCATCTTCTTaGATGTTAGCCAGCACCAAC +
Preference number: 4 (lower is better)
Translates to: RGIIGNSHCISVVLYHNGLASSS*MLASTN
Trigger: GTTGGTGCTGGCTAACATCCAAGAAGATGAGGCTAA...TCCGTTATGATACAGAACAACGCTTATGCAGTGGCTGTTGCCAATTATGCCCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000510233.5
ENST00000513005.5
ENST00000630416.2
CDS-3UTR CCA 90 bp TTGCACTCTTGGAGATGGTGGAGAGAACTGGATCTTTTGAAAGATTCGGGGCATACTGTCTCCCAGTCCTaGTCTAAGCCGATTATCGTA +
Preference number: 4 (lower is better)
Translates to: LHSWRWWRELDLLKDSGHTVSQS*SKPIIV
Trigger: TACGATAATCGGCTTAGACCAGGACTGGGAGACAGT...ATGCCCCGAATCTTTCAAAAGATCCAGTTCTCTCCACCATCTCCAAGAGTGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510233.5
CDS-3UTR CCA 90 bp TCTGGCGTGGTTGCACTCTTGGAGATGGTGGAGAGAACTGGATCTTTTGAAAGATTGCACTCTTGGAGATaGTGGAGAGAACTGGATCTT +
Preference number: 4 (lower is better)
Translates to: SGVVALLEMVERTGSFERLHSWR*WRELDL
Trigger: AAGATCCAGTTCTCTCCACCATCTCCAAGAGTGCAA...TCTTTCAAAAGATCCAGTTCTCTCCACCATCTCCAAGAGTGCAACCACGCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000510233.5
ENST00000513005.5
ENST00000630416.2
CDS-3UTR CCA 90 bp TGGTATACAGCAGAGTCCCATCATCCTGAATTCGAAGCAACTTATTTGGCATTGTGTTGGGTTCTGGCGTaGTTGCACTCTTGGAGATGG +
Preference number: 4 (lower is better)
Translates to: WYTAESHHPEFEATYLALCWVLA*LHSWRW
Trigger: CCATCTCCAAGAGTGCAACCACGCCAGAACCCAACA...CAATGCCAAATAAGTTGCTTCGAATTCAGGATGATGGGACTCTGCTGTATACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513005.5
ENST00000630416.2
CDS-3UTR CCA 90 bp ATGAATGAGCATCCATTGGGAAATCCTCCAAGTGCATTGGGCATTCAGCTTGAACTTCTTGTTGGGTTCTaGCGTGGTTGCACTCTTGGA +
Preference number: 4 (lower is better)
Translates to: MNEHPLGNPPSALGIQLELLVGF*RGCTLG
Trigger: TCCAAGAGTGCAACCACGCCAGAACCCAACAAGAAG...TTCAAGCTGAATGCCCAATGCACTTGGAGGATTTCCCAATGGATGCTCATTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513005.5
ENST00000630416.2
3UTR CAA 72 bp TTGCACTCTTGGAGATGGTGGAGAGAACTGGATCTTTaGAAAGATTCGGGGCATAATTGGCAACAGCCACTG +
Preference number: 4 (lower is better)
Translates to: LHSWRWWRELDL*KDSGHNWQQPL
Trigger: CAGTGGCTGTTGCCAATTATGCCCCGAATCTTTCAAAAGATCCAGTTCTCTCCACCATCTCCAAGAGTGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000510233.5
ENST00000513005.5
ENST00000630416.2
3UTR CAA 72 bp CAGCACAAATGGCAAACCTCTTTATTCCTGGGAGCTTaGGAAAAAGGGCATACAGCACTGCCTTCTAACACC +
Preference number: 4 (lower is better)
Translates to: QHKWQTSLFLGA*EKGHTALPSNT
Trigger: GGTGTTAGAAGGCAGTGCTGTATGCCCTTTTTCCAAAGCTCCCAGGAATAAAGAGGTTTGCCATTTGTGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR TCA 90 bp AATGAGCATCCATTGGGAAATCCTCCAAGTGCATTGGGCATTCAGCTTGAACTGATTGGGCATTCAGCTTaGACTGTAAGCCTCATGGTA +
Preference number: 4 (lower is better)
Translates to: NEHPLGNPPSALGIQLELIGHSA*TVSLMV
Trigger: TACCATGAGGCTTACAGTTCAAGCTGAATGCCCAAT...CAGTTCAAGCTGAATGCCCAATGCACTTGGAGGATTTCCCAATGGATGCTCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000513005.5
ENST00000514193.5
ENST00000630416.2
CDS-3UTR TCA 90 bp TTGCACTCTTGGAGATGGTGGAGAGAACTGGATCTTTTGAAAGATTCGGGGCATCCCAGCAGGTCATATTaGTTTAACCTAGAGCCATCA +
Preference number: 4 (lower is better)
Translates to: LHSWRWWRELDLLKDSGHPSRSY*FNLEPS
Trigger: TGATGGCTCTAGGTTAAATCAATATGACCTGCTGGG...ATGCCCCGAATCTTTCAAAAGATCCAGTTCTCTCCACCATCTCCAAGAGTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630416.2
CDS-3UTR TCA 90 bp GCGTGGTTGCACTCTTGGAGATGGTGGAGAGAACTGGATCTTTTGAAAGATTCGTCTGTTAAGCCAGAATaGAACTTGGGAGAGAATGAC +
Preference number: 4 (lower is better)
Translates to: AWLHSWRWWRELDLLKDSSVKPE*NLGEND
Trigger: GTCATTCTCTCCCAAGTTTCATTCTGGCTTAACAGA...CGAATCTTTCAAAAGATCCAGTTCTCTCCACCATCTCCAAGAGTGCAACCACGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510233.5
ENST00000630416.2
CDS-3UTR TCA 90 bp TGCTATCCGGGCTTTTACAATCAATCAGCAGAGACTGGAACAGGTGAAGAGGATGAGAATTCCGAGCACTaGTGCTTAGAGTTGTCATTG +
Preference number: 4 (lower is better)
Translates to: CYPGFYNQSAETGTGEEDENSEH*CLELSL
Trigger: CAATGACAACTCTAAGCATCAGTGCTCGGAATTCTC...ATCCTCTTCACCTGTTCCAGTCTCTGCTGATTGATTGTAAAAGCCCGGATAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515082.5
CDS-3UTR TCA 90 bp AATGAGCATCCATTGGGAAATCCTCCAAGTGCATTGGGCATTCAGCTTGAACTGTCTCAATTCAAGGACTaGCCCCTAATACAGGTTCTC +
Preference number: 4 (lower is better)
Translates to: NEHPLGNPPSALGIQLELSQFKD*PLIQVL
Trigger: GAGAACCTGTATTAGGGGTCAGTCCTTGAATTGAGA...CAGTTCAAGCTGAATGCCCAATGCACTTGGAGGATTTCCCAATGGATGCTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000513005.5
ENST00000630416.2
CDS-3UTR TCA 90 bp AGAACCTTGAAAACAGATGACTCAGTCCAGTGTTTGGACCATGTGCATCAGAATCCCATGGAGAGCATTTaGGTTTGGGTCCCTTTGTTC +
Preference number: 4 (lower is better)
Translates to: RTLKTDDSVQCLDHVHQNPMESI*VWVPLF
Trigger: GAACAAAGGGACCCAAACTCAAATGCTCTCCATGGG...ATTCTGATGCACATGGTCCAAACACTGGACTGAGTCATCTGTTTTCAAGGTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR GCA 90 bp CTCATCAGTGGGAGTTTTTGGCACAATTTTCTAATCCAATATGCATGTTGCTCCCCAGTCCATGGCAGTTaGATAAGCCACTTTGGGGAG +
Preference number: 4 (lower is better)
Translates to: LISGSFWHNFLIQYACCSPVHGS*ISHFGE
Trigger: CTCCCCAAAGTGGCTTATGCAACTGCCATGGACTGG...GGAGCAACATGCATATTGGATTAGAAAATTGTGCCAAAAACTCCCACTGATGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
CDS-3UTR GCA 90 bp AAGCCTCCTCTTAGGCAGATACATAATCTACAGAGTATGAAAGGAAACAGCTGTCCAGTCCATGGCAGTTaGATAAGCCACTTTGGGGAG +
Preference number: 4 (lower is better)
Translates to: KPPLRQIHNLQSMKGNSCPVHGS*ISHFGE
Trigger: CTCCCCAAAGTGGCTTATGCAACTGCCATGGACTGG...ACAGCTGTTTCCTTTCATACTCTGTAGATTATGTATCTGCCTAAGAGGAGGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515082.5
CDS-3UTR GCA 90 bp TCTGGCGTGGTTGCACTCTTGGAGATGGTGGAGAGAACTGGATCTTTTGAAAGAATTGGCAACAGCCACTaGATAAGCGTTGTTCTGTAT +
Preference number: 4 (lower is better)
Translates to: SGVVALLEMVERTGSFERIGNSH*ISVVLY
Trigger: ATACAGAACAACGCTTATGCAGTGGCTGTTGCCAAT...TCTTTCAAAAGATCCAGTTCTCTCCACCATCTCCAAGAGTGCAACCACGCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000510233.5
ENST00000513005.5
ENST00000630416.2
CDS-3UTR GCA 90 bp AGATGGCATGTTATCATCTTCATGAAGTATCTATTCCTACCTAATAAAGGGGCAGACGCGTTTGACAGCTaGTCTGGAGCCGAGGATCAC +
Preference number: 4 (lower is better)
Translates to: RWHVIIFMKYLFLPNKGADAFDS*SGAEDH
Trigger: GTGATCCTCGGCTCCAGAGCAGCTGTCAAACGCGTC...TGCCCCTTTATTAGGTAGGAATAGATACTTCATGAAGATGATAACATGCCATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR GCA 90 bp TTGAACAATGGACTGTGGGCAGAGGGACATTGTGTCACATCTGGGCAGAAGCTTTTCCTTTATTTGTTCTaGCCATGGAGAGCATTTGAG +
Preference number: 4 (lower is better)
Translates to: LNNGLWAEGHCVTSGQKLFLYLF*PWRAFE
Trigger: CTCAAATGCTCTCCATGGGCAGAACAAATAAAGGAA...AAGCTTCTGCCCAGATGTGACACAATGTCCCTCTGCCCACAGTCCATTGTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR CCA 90 bp AGTTTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCACAGAGGAGAGGAGAGATaGGTACTTCACGCCACAACC +
Preference number: 4 (lower is better)
Translates to: SFSYVYQASNYISRDSEHRGEER*VLHATT
Trigger: GGTTGTGGCGTGAAGTACCCATCTCTCCTCTCCTCT...GTGCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356504.5
CDS-3UTR CCA 90 bp AATGAGCATCCATTGGGAAATCCTCCAAGTGCATTGGGCATTCAGCTTGAACTGATCCTCCAAGTGCATTaGGCATTCAGCTTGAACTGT +
Preference number: 4 (lower is better)
Translates to: NEHPLGNPPSALGIQLELILQVH*AFSLNC
Trigger: ACAGTTCAAGCTGAATGCCCAATGCACTTGGAGGAT...CAGTTCAAGCTGAATGCCCAATGCACTTGGAGGATTTCCCAATGGATGCTCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000513005.5
ENST00000514193.5
ENST00000630416.2
CDS-3UTR CCA 90 bp TTGCACTCTTGGAGATGGTGGAGAGAACTGGATCTTTTGAAAGATTCGGGGCATCACTCTTGGAGATGGTaGAGAGAACTGGATCTTTTG +
Preference number: 4 (lower is better)
Translates to: LHSWRWWRELDLLKDSGHHSWRW*RELDLL
Trigger: CAAAAGATCCAGTTCTCTCCACCATCTCCAAGAGTG...ATGCCCCGAATCTTTCAAAAGATCCAGTTCTCTCCACCATCTCCAAGAGTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000510233.5
ENST00000513005.5
ENST00000630416.2
CDS-3UTR CCA 90 bp AGTTTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCACGCGTGGTTGCACTCTTaGAGATGGTGGAGAGAACTG +
Preference number: 4 (lower is better)
Translates to: SFSYVYQASNYISRDSEHAWLHS*RWWREL
Trigger: CAGTTCTCTCCACCATCTCCAAGAGTGCAACCACGC...GTGCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR CCA 90 bp CTCATCAGTGGGAGTTTTTGGCACAATTTTCTAATCCAATATGCATGTTGCTCCGCGTGGTTGCACTCTTaGAGATGGTGGAGAGAACTG +
Preference number: 4 (lower is better)
Translates to: LISGSFWHNFLIQYACCSAWLHS*RWWREL
Trigger: CAGTTCTCTCCACCATCTCCAAGAGTGCAACCACGC...GGAGCAACATGCATATTGGATTAGAAAATTGTGCCAAAAACTCCCACTGATGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
CDS-3UTR CCA 90 bp AGTTTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCACTGTTGGGTTCTGGCGTaGTTGCACTCTTGGAGATGG +
Preference number: 4 (lower is better)
Translates to: SFSYVYQASNYISRDSEHCWVLA*LHSWRW
Trigger: CCATCTCCAAGAGTGCAACCACGCCAGAACCCAACA...GTGCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR CCA 90 bp CATGGTATACAGCAGAGTCCCATCATCCTGAATTCGAAGCAACTTATTTGGCATTTTCTGGCTTCTTGTTaGGTTCTGGCGTGGTTGCAC +
Preference number: 4 (lower is better)
Translates to: HGIQQSPIILNSKQLIWHFLASC*VLAWLH
Trigger: GTGCAACCACGCCAGAACCCAACAAGAAGCCAGAAA...ATGCCAAATAAGTTGCTTCGAATTCAGGATGATGGGACTCTGCTGTATACCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000513005.5
ENST00000630416.2
CDS-3UTR CCA 90 bp CAAATGCATGTCTCCATTAAAGGTCTACTGGTAAGCTATGTCACTATATACATAGCAGCCAAGAGAGCGTaGAGCGATGGGCTGGTGGAA +
Preference number: 4 (lower is better)
Translates to: QMHVSIKGLLVSYVTIYIAAKRA*SDGLVE
Trigger: TTCCACCAGCCCATCGCTCCACGCTCTCTTGGCTGC...TATGTATATAGTGACATAGCTTACCAGTAGACCTTTAATGGAGACATGCATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381620.9
ENST00000540012.5
CDS-3UTR CCA 90 bp TTGAACAATGGACTGTGGGCAGAGGGACATTGTGTCACATCTGGGCAGAAGCTTCAATGTTTTAGGTGGTaGAAGTCCATCAATCCGAAA +
Preference number: 4 (lower is better)
Translates to: LNNGLWAEGHCVTSGQKLQCFRW*KSINPK
Trigger: TTTCGGATTGATGGACTTCCACCACCTAAAACATTG...AAGCTTCTGCCCAGATGTGACACAATGTCCCTCTGCCCACAGTCCATTGTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR TCA 90 bp TATTCACCTGTACTGGATTTAATTGTCTCCTTTCCGATTGATTGGCCCAGCAGGTTCAGAGGACATGAATaGGCATCCATTGGGAAATCC +
Preference number: 4 (lower is better)
Translates to: YSPVLDLIVSFPIDWPSRFRGHE*ASIGKS
Trigger: GGATTTCCCAATGGATGCTCATTCATGTCCTCTGAA...CCTGCTGGGCCAATCAATCGGAAAGGAGACAATTAAATCCAGTACAGGTGAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630416.2
CDS-3UTR TCA 90 bp AGTTTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCACTGTCTCCTTTCCGATTaGTTGGCCCAGCAGGTCATA +
Preference number: 4 (lower is better)
Translates to: SFSYVYQASNYISRDSEHCLLSD*LAQQVI
Trigger: TATGACCTGCTGGGCCAATCAATCGGAAAGGAGACA...GTGCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR TCA 90 bp CTCATCAGTGGGAGTTTTTGGCACAATTTTCTAATCCAATATGCATGTTGCTCCTGTCTCCTTTCCGATTaGTTGGCCCAGCAGGTCATA +
Preference number: 4 (lower is better)
Translates to: LISGSFWHNFLIQYACCSCLLSD*LAQQVI
Trigger: TATGACCTGCTGGGCCAATCAATCGGAAAGGAGACA...GGAGCAACATGCATATTGGATTAGAAAATTGTGCCAAAAACTCCCACTGATGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
CDS-3UTR TCA 90 bp ACCCTTACCAAAACCTCTTCTGGTATACAAAGCTGTTGTAAATTTGAGTCAGCGTGTCTCCTTTCCGATTaGTTGGCCCAGCAGGTCATA +
Preference number: 4 (lower is better)
Translates to: TLTKTSSGIQSCCKFESACLLSD*LAQQVI
Trigger: TATGACCTGCTGGGCCAATCAATCGGAAAGGAGACA...CGCTGACTCAAATTTACAACAGCTTTGTATACCAGAAGAGGTTTTGGTAAGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
CDS-3UTR TCA 90 bp GGTTCTGGCGTGGTTGCACTCTTGGAGATGGTGGAGAGAACTGGATCTTTTGAACTTTTCAGGTGGAAATaGGCTGTCATTACAGTATAT +
Preference number: 4 (lower is better)
Translates to: GSGVVALLEMVERTGSFELFRWK*AVITVY
Trigger: ATATACTGTAATGACAGCTCATTTCCACCTGAAAAG...TTCAAAAGATCCAGTTCTCTCCACCATCTCCAAGAGTGCAACCACGCCAGAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510233.5
ENST00000630416.2
CDS-3UTR TCA 90 bp ATGAATGAGCATCCATTGGGAAATCCTCCAAGTGCATTGGGCATTCAGCTTGAAGAGAATTCCGAGCACTaGTGCTTAGAGTTGTCATTG +
Preference number: 4 (lower is better)
Translates to: MNEHPLGNPPSALGIQLEENSEH*CLELSL
Trigger: CAATGACAACTCTAAGCATCAGTGCTCGGAATTCTC...TTCAAGCTGAATGCCCAATGCACTTGGAGGATTTCCCAATGGATGCTCATTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513005.5
ENST00000630416.2
CDS-3UTR TCA 90 bp CTCATCAGTGGGAGTTTTTGGCACAATTTTCTAATCCAATATGCATGTTGCTCCAGTGTGGGGCACCTATaGATTCTCATCAGTGGGAGT +
Preference number: 4 (lower is better)
Translates to: LISGSFWHNFLIQYACCSSVGHL*ILISGS
Trigger: ACTCCCACTGATGAGAATTCATAGGTGCCCCACACT...GGAGCAACATGCATATTGGATTAGAAAATTGTGCCAAAAACTCCCACTGATGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
CDS-3UTR TCA 90 bp CTGATCTTTTCCAAAGTACACTATATTGTGTCTCATAAGATGTACATGGGTCAAATAAGAGAAGGCGCGTaGGGCTCCGGCAGCAAACAC +
Preference number: 4 (lower is better)
Translates to: LIFSKVHYIVSHKMYMGQIREGA*GSGSKH
Trigger: GTGTTTGCTGCCGGAGCCTCACGCGCCTTCTCTTAT...TTGACCCATGTACATCTTATGAGACACAATATAGTGTACTTTGGAAAAGATCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR TCA 90 bp GCGCACCATCCTTCCCCTTCCAGAGATACTTATCCAGATGCTAATGATTACACACCTCTGCAAGACAACTaGAAAACTTTAAACGGTTGG +
Preference number: 4 (lower is better)
Translates to: AHHPSPSRDTYPDANDYTPLQDN*KTLNGW
Trigger: CCAACCGTTTAAAGTTTTTCAGTTGTCTTGCAGAGG...TGTGTAATCATTAGCATCTGGATAAGTATCTCTGGAAGGGGAAGGATGGTGCGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR TCA 90 bp TTGAACAATGGACTGTGGGCAGAGGGACATTGTGTCACATCTGGGCAGAAGCTTACGTCAAACTCAGGATaGCCAAGAAATGCAATAATA +
Preference number: 4 (lower is better)
Translates to: LNNGLWAEGHCVTSGQKLTSNSG*PRNAII
Trigger: TATTATTGCATTTCTTGGTCATCCTGAGTTTGACGT...AAGCTTCTGCCCAGATGTGACACAATGTCCCTCTGCCCACAGTCCATTGTTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR GCA 90 bp AGATGGCATGTTATCATCTTCATGAAGTATCTATTCCTACCTAATAAAGGGGCACTGCCCACCCACGGTTaGCCAAGACCAAGTCTTAGA +
Preference number: 4 (lower is better)
Translates to: RWHVIIFMKYLFLPNKGALPTHG*PRPSLR
Trigger: TCTAAGACTTGGTCTTGGGCAACCGTGGGTGGGCAG...TGCCCCTTTATTAGGTAGGAATAGATACTTCATGAAGATGATAACATGCCATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR GCA 90 bp TGTTCAACCCTTACCAAAACCTCTTCTGGTATACAAAGCTGTTGTAAATTTGAGCTGCCCACCCACGGTTaGCCAAGACCAAGTCTTAGA +
Preference number: 4 (lower is better)
Translates to: CSTLTKTSSGIQSCCKFELPTHG*PRPSLR
Trigger: TCTAAGACTTGGTCTTGGGCAACCGTGGGTGGGCAG...CTCAAATTTACAACAGCTTTGTATACCAGAAGAGGTTTTGGTAAGGGTTGAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514090.5
CDS-3UTR GCA 90 bp TGGGTCTCAATTCAAGGACTGACCCCTAATACAGGTTCTCTGTTTAAATATGTACCAGTCCATGGCAGTTaGATAAGCCACTTTGGGGAG +
Preference number: 4 (lower is better)
Translates to: WVSIQGLTPNTGSLFKYVPVHGS*ISHFGE
Trigger: CTCCCCAAAGTGGCTTATGCAACTGCCATGGACTGG...TACATATTTAAACAGAGAACCTGTATTAGGGGTCAGTCCTTGAATTGAGACCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000510233.5
ENST00000513005.5
ENST00000630416.2
CDS-3UTR GCA 90 bp TGGCAAATTCCGTTAATAAGTTGCATTTGTGACCTTGGTTTTATACAAGCATGCGGGTTCTGGCGTGGTTaGACTCTTGGAGATGGTGGA +
Preference number: 4 (lower is better)
Translates to: WQIPLISCICDLGFIQACGFWRG*TLGDGG
Trigger: TCCACCATCTCCAAGAGTGCAACCACGCCAGAACCC...GCATGCTTGTATAAAACCAAGGTCACAAATGCAACTTATTAACGGAATTTGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
CDS-3UTR GCA 90 bp CAAATGCATGTCTCCATTAAAGGTCTACTGGTAAGCTATGTCACTATATACATAGAGAGAGACCGAGACTaGAGCAGCCAAGAGAGCGTG +
Preference number: 4 (lower is better)
Translates to: QMHVSIKGLLVSYVTIYIERDRD*SSQESV
Trigger: CACGCTCTCTTGGCTGCTGCAGTCTCGGTCTCTCTC...TATGTATATAGTGACATAGCTTACCAGTAGACCTTTAATGGAGACATGCATTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381620.9
ENST00000540012.5
CDS-3UTR GCA 90 bp AGATGGCATGTTATCATCTTCATGAAGTATCTATTCCTACCTAATAAAGGGGCACGGGTTCCGATCAAGTaGTGCGAAACGACGCGTTTG +
Preference number: 4 (lower is better)
Translates to: RWHVIIFMKYLFLPNKGARVPIK*CETTRL
Trigger: CAAACGCGTCGTTTCGCAGCACTTGATCGGAACCCG...TGCCCCTTTATTAGGTAGGAATAGATACTTCATGAAGATGATAACATGCCATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR CCA 90 bp AGTTTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCACAACTGGCATAGCAGCTaGAAAGGGAATGGGTTGGAG +
Preference number: 4 (lower is better)
Translates to: SFSYVYQASNYISRDSEHNWHSS*KGNGLE
Trigger: CTCCAACCCATTCCCTTTCCAGCTGCTATGCCAGTT...GTGCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356504.5
CDS-3UTR CCA 90 bp TTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCACTCACCCTGGACTTTAAACTaGCATAGCAGCTGGAAAGGG +
Preference number: 4 (lower is better)
Translates to: FSYVYQASNYISRDSEHSPWTLN*HSSWKG
Trigger: CCCTTTCCAGCTGCTATGCCAGTTTAAAGTCCAGGG...TGAGTGCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356504.5
CDS-3UTR CCA 90 bp ATGAATGAGCATCCATTGGGAAATCCTCCAAGTGCATTGGGCATTCAGCTTGAATTAGCCTCATCTTCTTaGATGTTAGCCAGCACCAAC +
Preference number: 4 (lower is better)
Translates to: MNEHPLGNPPSALGIQLELASSS*MLASTN
Trigger: GTTGGTGCTGGCTAACATCCAAGAAGATGAGGCTAA...TTCAAGCTGAATGCCCAATGCACTTGGAGGATTTCCCAATGGATGCTCATTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000513005.5
ENST00000514193.5
ENST00000630416.2
CDS-3UTR CCA 90 bp GAACTGGATCTTTTGAAAGATTCGGGGCATAATTGGCAACAGCCACTGCATAAGATCCTCCAAGTGCATTaGGCATTCAGCTTGAACTGT +
Preference number: 4 (lower is better)
Translates to: ELDLLKDSGHNWQQPLHKILQVH*AFSLNC
Trigger: ACAGTTCAAGCTGAATGCCCAATGCACTTGGAGGAT...CTTATGCAGTGGCTGTTGCCAATTATGCCCCGAATCTTTCAAAAGATCCAGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000513005.5
ENST00000630416.2
CDS-3UTR CCA 90 bp TTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCACTCACTTCTTGTTGGGTTCTaGCGTGGTTGCACTCTTGGA +
Preference number: 4 (lower is better)
Translates to: FSYVYQASNYISRDSEHSLLVGF*RGCTLG
Trigger: TCCAAGAGTGCAACCACGCCAGAACCCAACAAGAAG...TGAGTGCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR CCA 90 bp AGTTTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCACCTTCTTGTTGGGTTCTaGCGTGGTTGCACTCTTGGA +
Preference number: 4 (lower is better)
Translates to: SFSYVYQASNYISRDSEHLLVGF*RGCTLG
Trigger: TCCAAGAGTGCAACCACGCCAGAACCCAACAAGAAG...GTGCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR CCA 90 bp AGTTTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCACTTTCTGGCTTCTTGTTaGGTTCTGGCGTGGTTGCAC +
Preference number: 4 (lower is better)
Translates to: SFSYVYQASNYISRDSEHFLASC*VLAWLH
Trigger: GTGCAACCACGCCAGAACCCAACAAGAAGCCAGAAA...GTGCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR CCA 90 bp TTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCACTCATTTCTGGCTTCTTGTTaGGTTCTGGCGTGGTTGCAC +
Preference number: 4 (lower is better)
Translates to: FSYVYQASNYISRDSEHSFLASC*VLAWLH
Trigger: GTGCAACCACGCCAGAACCCAACAAGAAGCCAGAAA...TGAGTGCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR CCA 90 bp CTAGTTTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCTTTCTGGCTTCTTGTTaGGTTCTGGCGTGGTTGCAC +
Preference number: 4 (lower is better)
Translates to: LVFLMCTKLPITLAGTLSFLASC*VLAWLH
Trigger: GTGCAACCACGCCAGAACCCAACAAGAAGCCAGAAA...GCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAAACTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR CCA 90 bp TGGTATACAGCAGAGTCCCATCATCCTGAATTCGAAGCAACTTATTTGGCATTGAGCTGGCTTGTTTTCTaGCTTCTTGTTGGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: WYTAESHHPEFEATYLALSWLVF*LLVGFW
Trigger: CCAGAACCCAACAAGAAGCCAGAAAACAAGCCAGCT...CAATGCCAAATAAGTTGCTTCGAATTCAGGATGATGGGACTCTGCTGTATACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000513005.5
ENST00000630416.2
CDS-3UTR CCA 90 bp AGAACCTTGAAAACAGATGACTCAGTCCAGTGTTTGGACCATGTGCATCAGAATCTTTATGAGAAGTCTTaGTTTAGGGCCAGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: RTLKTDDSVQCLDHVHQNLYEKS*FRARGC
Trigger: GCAGCCTCTGGCCCTAAACCAAGACTTCTCATAAAG...ATTCTGATGCACATGGTCCAAACACTGGACTGAGTCATCTGTTTTCAAGGTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR CCA 90 bp ACAAAGGGAAATGAAGCAGTTGTAACTCAATGCATCTGGAAAGAGGGTTCTTGCTTGAACAATGGACTGTaGGCAGAGGGACATTGTGTC +
Preference number: 4 (lower is better)
Translates to: TKGNEAVVTQCIWKEGSCLNNGL*AEGHCV
Trigger: GACACAATGTCCCTCTGCCCACAGTCCATTGTTCAA...GCAAGAACCCTCTTTCCAGATGCATTGAGTTACAACTGCTTCATTTCCCTTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR CCA 90 bp GCGCACCATCCTTCCCCTTCCAGAGATACTTATCCAGATGCTAATGATTACACACCTTCACAGCACAAATaGCAAACCTCTTTATTCCTG +
Preference number: 4 (lower is better)
Translates to: AHHPSPSRDTYPDANDYTPSQHK*QTSLFL
Trigger: CAGGAATAAAGAGGTTTGCCATTTGTGCTGTGAAGG...TGTGTAATCATTAGCATCTGGATAAGTATCTCTGGAAGGGGAAGGATGGTGCGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR CCA 90 bp ACAAAGGGAAATGAAGCAGTTGTAACTCAATGCATCTGGAAAGAGGGTTCTTGCGCTGAAATCAAGGTATaGGTGTGCTGTGCTCCTTTC +
Preference number: 4 (lower is better)
Translates to: TKGNEAVVTQCIWKEGSCAEIKV*VCCAPF
Trigger: GAAAGGAGCACAGCACACCCATACCTTGATTTCAGC...GCAAGAACCCTCTTTCCAGATGCATTGAGTTACAACTGCTTCATTTCCCTTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR CCA 90 bp ATGAATGAGCATCCATTGGGAAATCCTCCAAGTGCATTGGGCATTCAGCTTGAATATTCCTCCCAGTCCTaGTCTAAGCCGATTATCGTA +
Preference number: 4 (lower is better)
Translates to: MNEHPLGNPPSALGIQLEYSSQS*SKPIIV
Trigger: TACGATAATCGGCTTAGACCAGGACTGGGAGGAATA...TTCAAGCTGAATGCCCAATGCACTTGGAGGATTTCCCAATGGATGCTCATTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000513005.5
ENST00000514193.5
ENST00000630416.2
3UTR CAA 72 bp GCTCTTCTGGAATCCATGATTATATCATGGCAGGGTTaGTGTCCCTCAACCAGGAATTCAAAAAGAGCCACA +
Preference number: 4 (lower is better)
Translates to: ALLESMIISWQG*CPSTRNSKRAT
Trigger: TGTGGCTCTTTTTGAATTCCTGGTTGAGGGACACAAACCCTGCCATGATATAATCATGGATTCCAGAAGAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381620.9
CDS-3UTR TCA 90 bp CTAGTTTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCTACTCTACATTACAGTaGACTGCGGTCCTCACGTCT +
Preference number: 4 (lower is better)
Translates to: LVFLMCTKLPITLAGTLSYSTLQ*TAVLTS
Trigger: AGACGTGAGGACCGCAGTTCACTGTAATGTAGAGTA...GCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAAACTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356504.5
ENST00000514090.5
CDS-3UTR TCA 90 bp GTTGCACTCTTGGAGATGGTGGAGAGAACTGGATCTTTTGAAAGATTCGGGGCACTTTTCAGGTGGAAATaGGCTGTCATTACAGTATAT +
Preference number: 4 (lower is better)
Translates to: VALLEMVERTGSFERFGALFRWK*AVITVY
Trigger: ATATACTGTAATGACAGCTCATTTCCACCTGAAAAG...TGCCCCGAATCTTTCAAAAGATCCAGTTCTCTCCACCATCTCCAAGAGTGCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000510233.5
ENST00000630416.2
CDS-3UTR TCA 90 bp TTGCACTCTTGGAGATGGTGGAGAGAACTGGATCTTTTGAAAGATTCGGGGCATGAGAACTGGATCTTTTaGAAGATTCGGGGCATAATT +
Preference number: 4 (lower is better)
Translates to: LHSWRWWRELDLLKDSGHENWIF*KIRGII
Trigger: AATTATGCCCCGAATCTTTCAAAAGATCCAGTTCTC...ATGCCCCGAATCTTTCAAAAGATCCAGTTCTCTCCACCATCTCCAAGAGTGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000510233.5
ENST00000513005.5
ENST00000630416.2
CDS-3UTR TCA 90 bp AATGAGCATCCATTGGGAAATCCTCCAAGTGCATTGGGCATTCAGCTTGAACTGACTCATGAACAGAGCTaGTGTCAGATACAATGTTTG +
Preference number: 4 (lower is better)
Translates to: NEHPLGNPPSALGIQLELTHEQS*CQIQCL
Trigger: CAAACATTGTATCTGACATCAGCTCTGTTCATGAGT...CAGTTCAAGCTGAATGCCCAATGCACTTGGAGGATTTCCCAATGGATGCTCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630416.2
CDS-3UTR TCA 90 bp ACCCTTACCAAAACCTCTTCTGGTATACAAAGCTGTTGTAAATTTGAGTCAGCGACATACACACATCACTaGCACACACAGCTAAGACCC +
Preference number: 4 (lower is better)
Translates to: TLTKTSSGIQSCCKFESATYTHH*HTQLRP
Trigger: GGGTCTTAGCTGTGTGTGTCAGTGATGTGTGTATGT...CGCTGACTCAAATTTACAACAGCTTTGTATACCAGAAGAGGTTTTGGTAAGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381620.9
CDS-3UTR TCA 90 bp AGAACCTTGAAAACAGATGACTCAGTCCAGTGTTTGGACCATGTGCATCAGAATCTTTGTTCTGGCTCTTaGAGGCTATGTTACACAGAC +
Preference number: 4 (lower is better)
Translates to: RTLKTDDSVQCLDHVHQNLCSGS*RLCYTD
Trigger: GTCTGTGTAACATAGCCTTCAAGAGCCAGAACAAAG...ATTCTGATGCACATGGTCCAAACACTGGACTGAGTCATCTGTTTTCAAGGTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR GCA 90 bp GTTGCACTCTTGGAGATGGTGGAGAGAACTGGATCTTTTGAAAGATTCGGGGCATTGTATATGCATAGCTaGCAAATTTCAGAGGACATG +
Preference number: 4 (lower is better)
Translates to: VALLEMVERTGSFERFGALYMHS*QISEDM
Trigger: CATGTCCTCTGAAATTTGGCAGCTATGCATATACAA...TGCCCCGAATCTTTCAAAAGATCCAGTTCTCTCCACCATCTCCAAGAGTGCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630416.2
CDS-3UTR GCA 90 bp ACTGGTAAGCTATGTCACTATATACATACTGTACATGTTGGATCACAAATTAGCGGGTTCTGGCGTGGTTaGACTCTTGGAGATGGTGGA +
Preference number: 4 (lower is better)
Translates to: TGKLCHYIHTVHVGSQISGFWRG*TLGDGG
Trigger: TCCACCATCTCCAAGAGTGCAACCACGCCAGAACCC...GCTAATTTGTGATCCAACATGTACAGTATGTATATAGTGACATAGCTTACCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR GCA 90 bp AATTCTCATCAGTGGGAGTTTTTGGCACAATTTTCTAATCCAATATGCATGTTGGGGTTCTGGCGTGGTTaGACTCTTGGAGATGGTGGA +
Preference number: 4 (lower is better)
Translates to: NSHQWEFLAQFSNPICMLGFWRG*TLGDGG
Trigger: TCCACCATCTCCAAGAGTGCAACCACGCCAGAACCC...CAACATGCATATTGGATTAGAAAATTGTGCCAAAAACTCCCACTGATGAGAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
CDS-3UTR GCA 90 bp CAAATGCATGTCTCCATTAAAGGTCTACTGGTAAGCTATGTCACTATATACATAGGGTTCTGGCGTGGTTaGACTCTTGGAGATGGTGGA +
Preference number: 4 (lower is better)
Translates to: QMHVSIKGLLVSYVTIYIGFWRG*TLGDGG
Trigger: TCCACCATCTCCAAGAGTGCAACCACGCCAGAACCC...TATGTATATAGTGACATAGCTTACCAGTAGACCTTTAATGGAGACATGCATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR GCA 90 bp CGGGGCATAATTGGCAACAGCCACTGCATAAGCGTTGTTCTGTATCATAACGGAGTTGAAAGTTTTCTTTaGTTCAGCTGGCTTGTTTTC +
Preference number: 4 (lower is better)
Translates to: RGIIGNSHCISVVLYHNGVESFL*FSWLVF
Trigger: GAAAACAAGCCAGCTGAAGCAAAGAAAACTTTCAAC...TCCGTTATGATACAGAACAACGCTTATGCAGTGGCTGTTGCCAATTATGCCCCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000510233.5
ENST00000513005.5
ENST00000630416.2
CDS-3UTR GCA 90 bp CATGGTATACAGCAGAGTCCCATCATCCTGAATTCGAAGCAACTTATTTGGCATTGTTTTCGCATGGAGTaGTTTCTGTCTGCAGTTCCA +
Preference number: 4 (lower is better)
Translates to: HGIQQSPIILNSKQLIWHCFRME*FLSAVP
Trigger: TGGAACTGCAGACAGAAAGCACTCCATGCGAAAACA...ATGCCAAATAAGTTGCTTCGAATTCAGGATGATGGGACTCTGCTGTATACCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630416.2
CDS-3UTR GCA 90 bp AATTCTCATCAGTGGGAGTTTTTGGCACAATTTTCTAATCCAATATGCATGTTGCGGGTTCCGATCAAGTaGTGCGAAACGACGCGTTTG +
Preference number: 4 (lower is better)
Translates to: NSHQWEFLAQFSNPICMLRVPIK*CETTRL
Trigger: CAAACGCGTCGTTTCGCAGCACTTGATCGGAACCCG...CAACATGCATATTGGATTAGAAAATTGTGCCAAAAACTCCCACTGATGAGAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514090.5
CDS-3UTR CCA 90 bp CATGGTATACAGCAGAGTCCCATCATCCTGAATTCGAAGCAACTTATTTGGCATTTAGCCTCATCTTCTTaGATGTTAGCCAGCACCAAC +
Preference number: 4 (lower is better)
Translates to: HGIQQSPIILNSKQLIWHLASSS*MLASTN
Trigger: GTTGGTGCTGGCTAACATCCAAGAAGATGAGGCTAA...ATGCCAAATAAGTTGCTTCGAATTCAGGATGATGGGACTCTGCTGTATACCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000513005.5
ENST00000514193.5
ENST00000630416.2
CDS-3UTR CCA 90 bp AAAGTACTTTGGTGCTCTTCTGGAATCCATGATTATATCATGGCAGGGTTTGTGACTGTCTCCCAGTCCTaGTCTAAGCCGATTATCGTA +
Preference number: 4 (lower is better)
Translates to: KVLWCSSGIHDYIMAGFVTVSQS*SKPIIV
Trigger: TACGATAATCGGCTTAGACCAGGACTGGGAGACAGT...CACAAACCCTGCCATGATATAATCATGGATTCCAGAAGAGCACCAAAGTACTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381620.9
CDS-3UTR CCA 90 bp TTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCACTCAACTGTCTCCCAGTCCTaGTCTAAGCCGATTATCGTA +
Preference number: 4 (lower is better)
Translates to: FSYVYQASNYISRDSEHSTVSQS*SKPIIV
Trigger: TACGATAATCGGCTTAGACCAGGACTGGGAGACAGT...TGAGTGCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
CDS-3UTR CCA 90 bp AGTTTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCACGATTCGGGGCATAATTaGCAACAGCCACTGCATAAG +
Preference number: 4 (lower is better)
Translates to: SFSYVYQASNYISRDSEHDSGHN*QQPLHK
Trigger: CTTATGCAGTGGCTGTTGCCAATTATGCCCCGAATC...GTGCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR CCA 90 bp ACCCTTACCAAAACCTCTTCTGGTATACAAAGCTGTTGTAAATTTGAGTCAGCGGATTCGGGGCATAATTaGCAACAGCCACTGCATAAG +
Preference number: 4 (lower is better)
Translates to: TLTKTSSGIQSCCKFESADSGHN*QQPLHK
Trigger: CTTATGCAGTGGCTGTTGCCAATTATGCCCCGAATC...CGCTGACTCAAATTTACAACAGCTTTGTATACCAGAAGAGGTTTTGGTAAGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
CDS-3UTR CCA 90 bp TCAACCCTTACCAAAACCTCTTCTGGTATACAAAGCTGTTGTAAATTTGAGTCAGCGTGGTTGCACTCTTaGAGATGGTGGAGAGAACTG +
Preference number: 4 (lower is better)
Translates to: STLTKTSSGIQSCCKFESAWLHS*RWWREL
Trigger: CAGTTCTCTCCACCATCTCCAAGAGTGCAACCACGC...TGACTCAAATTTACAACAGCTTTGTATACCAGAAGAGGTTTTGGTAAGGGTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
CDS-3UTR CCA 90 bp TTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCACTCAAGCTGGCTTGTTTTCTaGCTTCTTGTTGGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: FSYVYQASNYISRDSEHSSWLVF*LLVGFW
Trigger: CCAGAACCCAACAAGAAGCCAGAAAACAAGCCAGCT...TGAGTGCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR CCA 90 bp CTCATCAGTGGGAGTTTTTGGCACAATTTTCTAATCCAATATGCATGTTGCTCCAGCTGGCTTGTTTTCTaGCTTCTTGTTGGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: LISGSFWHNFLIQYACCSSWLVF*LLVGFW
Trigger: CCAGAACCCAACAAGAAGCCAGAAAACAAGCCAGCT...GGAGCAACATGCATATTGGATTAGAAAATTGTGCCAAAAACTCCCACTGATGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
CDS-3UTR CCA 90 bp GGTTCTGGCGTGGTTGCACTCTTGGAGATGGTGGAGAGAACTGGATCTTTTGAAGGTACCAAACAAAACTaGAAAAACTATTCTGGACAT +
Preference number: 4 (lower is better)
Translates to: GSGVVALLEMVERTGSFEGTKQN*KNYSGH
Trigger: ATGTCCAGAATAGTTTTTCCAGTTTTGTTTGGTACC...TTCAAAAGATCCAGTTCTCTCCACCATCTCCAAGAGTGCAACCACGCCAGAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000510233.5
ENST00000513005.5
ENST00000630416.2
CDS-3UTR CCA 90 bp TTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCACTCAATGGCTGTTTTCGCATaGAGTGCTTTCTGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: FSYVYQASNYISRDSEHSMAVFA*SAFCLQ
Trigger: CTGCAGACAGAAAGCACTCCATGCGAAAACAGCCAT...TGAGTGCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR CCA 90 bp CTCATCAGTGGGAGTTTTTGGCACAATTTTCTAATCCAATATGCATGTTGCTCCCCACAGCAACCAAACTaGATGCTTTTTCCAGTCTCC +
Preference number: 4 (lower is better)
Translates to: LISGSFWHNFLIQYACCSPQQPN*MLFPVS
Trigger: GGAGACTGGAAAAAGCATCCAGTTTGGTTGCTGTGG...GGAGCAACATGCATATTGGATTAGAAAATTGTGCCAAAAACTCCCACTGATGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
CDS-3UTR CCA 90 bp CTAGTTTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCCCACAGCAACCAAACTaGATGCTTTTTCCAGTCTCC +
Preference number: 4 (lower is better)
Translates to: LVFLMCTKLPITLAGTLSPQQPN*MLFPVS
Trigger: GGAGACTGGAAAAAGCATCCAGTTTGGTTGCTGTGG...GCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAAACTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
CDS-3UTR CCA 90 bp TGGCAAATTCCGTTAATAAGTTGCATTTGTGACCTTGGTTTTATACAAGCATGCACCGGTGGCATCCCTTaGGATCAATTCAGGCGTCAT +
Preference number: 4 (lower is better)
Translates to: WQIPLISCICDLGFIQACTGGIP*DQFRRH
Trigger: ATGACGCCTGAATTGATCCCAAGGGATGCCACCGGT...GCATGCTTGTATAAAACCAAGGTCACAAATGCAACTTATTAACGGAATTTGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381620.9
CDS-3UTR CCA 90 bp AGAACCTTGAAAACAGATGACTCAGTCCAGTGTTTGGACCATGTGCATCAGAATTGGGTCCCTTTGTTCTaGCTCTTGAAGGCTATGTTA +
Preference number: 4 (lower is better)
Translates to: RTLKTDDSVQCLDHVHQNWVPLF*LLKAML
Trigger: TAACATAGCCTTCAAGAGCCAGAACAAAGGGACCCA...ATTCTGATGCACATGGTCCAAACACTGGACTGAGTCATCTGTTTTCAAGGTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR CCA 90 bp CATAATCAATTGACAAATGGTGAATTCTACATACTGTGCCAAGCACTAAGGACAGCCACATCTTTCCCCTaGACACAGTGGCTAGCAATG +
Preference number: 4 (lower is better)
Translates to: HNQLTNGEFYILCQALRTATSFP*TQWLAM
Trigger: CATTGCTAGCCACTGTGTCCAGGGGAAAGATGTGGC...TGTCCTTAGTGCTTGGCACAGTATGTAGAATTCACCATTTGTCAATTGATTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR CCA 90 bp AGAACCTTGAAAACAGATGACTCAGTCCAGTGTTTGGACCATGTGCATCAGAATTTGCACCCTGAGAAATaGGTTCTACTTGCCAAGTGT +
Preference number: 4 (lower is better)
Translates to: RTLKTDDSVQCLDHVHQNLHPEK*VLLAKC
Trigger: ACACTTGGCAAGTAGAACCCATTTCTCAGGGTGCAA...ATTCTGATGCACATGGTCCAAACACTGGACTGAGTCATCTGTTTTCAAGGTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR CCA 90 bp GCGCACCATCCTTCCCCTTCCAGAGATACTTATCCAGATGCTAATGATTACACATATAATCAGTCACTATaGAAGATGACTTGCACCCTG +
Preference number: 4 (lower is better)
Translates to: AHHPSPSRDTYPDANDYTYNQSL*KMTCTL
Trigger: CAGGGTGCAAGTCATCTTCCATAGTGACTGATTATA...TGTGTAATCATTAGCATCTGGATAAGTATCTCTGGAAGGGGAAGGATGGTGCGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR CCA 90 bp GCGCACCATCCTTCCCCTTCCAGAGATACTTATCCAGATGCTAATGATTACACAACACCCAACATATGCTaGGTACTTTTACAGGAACAT +
Preference number: 4 (lower is better)
Translates to: AHHPSPSRDTYPDANDYTTPNIC*VLLQEH
Trigger: ATGTTCCTGTAAAAGTACCCAGCATATGTTGGGTGT...TGTGTAATCATTAGCATCTGGATAAGTATCTCTGGAAGGGGAAGGATGGTGCGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR CCA 90 bp TGGTATACAGCAGAGTCCCATCATCCTGAATTCGAAGCAACTTATTTGGCATTGTATTCCTCCCAGTCCTaGTCTAAGCCGATTATCGTA +
Preference number: 4 (lower is better)
Translates to: WYTAESHHPEFEATYLALYSSQS*SKPIIV
Trigger: TACGATAATCGGCTTAGACCAGGACTGGGAGGAATA...CAATGCCAAATAAGTTGCTTCGAATTCAGGATGATGGGACTCTGCTGTATACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000513005.5
ENST00000514193.5
ENST00000630416.2
3UTR CAA 72 bp ACTGACATTTTCAAACCTAGTAAGCTAATTCAGCAATaGCAATCCCACCGGTGGCATCCCTTGGGATCAATT +
Preference number: 4 (lower is better)
Translates to: TDIFKPSKLIQQ*QSHRWHPLGSI
Trigger: AATTGATCCCAAGGGATGCCACCGGTGGGATTGCAATTGCTGAATTAGCTTACTAGGTTTGAAAATGTCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381620.9
CDS-3UTR TCA 90 bp TTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCACTCAATTGGGCATTCAGCTTaGACTGTAAGCCTCATGGTA +
Preference number: 4 (lower is better)
Translates to: FSYVYQASNYISRDSEHSIGHSA*TVSLMV
Trigger: TACCATGAGGCTTACAGTTCAAGCTGAATGCCCAAT...TGAGTGCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR TCA 90 bp CTAGTTTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCATTGGGCATTCAGCTTaGACTGTAAGCCTCATGGTA +
Preference number: 4 (lower is better)
Translates to: LVFLMCTKLPITLAGTLSIGHSA*TVSLMV
Trigger: TACCATGAGGCTTACAGTTCAAGCTGAATGCCCAAT...GCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAAACTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR TCA 90 bp ACCCTTACCAAAACCTCTTCTGGTATACAAAGCTGTTGTAAATTTGAGTCAGCGTTCAGAGGACATGAATaGGCATCCATTGGGAAATCC +
Preference number: 4 (lower is better)
Translates to: TLTKTSSGIQSCCKFESAFRGHE*ASIGKS
Trigger: GGATTTCCCAATGGATGCTCATTCATGTCCTCTGAA...CGCTGACTCAAATTTACAACAGCTTTGTATACCAGAAGAGGTTTTGGTAAGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
CDS-3UTR TCA 90 bp AGTTTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCACTTCAGAGGACATGAATaGGCATCCATTGGGAAATCC +
Preference number: 4 (lower is better)
Translates to: SFSYVYQASNYISRDSEHFRGHE*ASIGKS
Trigger: GGATTTCCCAATGGATGCTCATTCATGTCCTCTGAA...GTGCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR TCA 90 bp TTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCACTCACCCAGCAGGTCATATTaGTTTAACCTAGAGCCATCA +
Preference number: 4 (lower is better)
Translates to: FSYVYQASNYISRDSEHSPSRSY*FNLEPS
Trigger: TGATGGCTCTAGGTTAAATCAATATGACCTGCTGGG...TGAGTGCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR TCA 90 bp CTCATCAGTGGGAGTTTTTGGCACAATTTTCTAATCCAATATGCATGTTGCTCCCCCAGCAGGTCATATTaGTTTAACCTAGAGCCATCA +
Preference number: 4 (lower is better)
Translates to: LISGSFWHNFLIQYACCSPSRSY*FNLEPS
Trigger: TGATGGCTCTAGGTTAAATCAATATGACCTGCTGGG...GGAGCAACATGCATATTGGATTAGAAAATTGTGCCAAAAACTCCCACTGATGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
CDS-3UTR TCA 90 bp CTAGTTTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCCCCAGCAGGTCATATTaGTTTAACCTAGAGCCATCA +
Preference number: 4 (lower is better)
Translates to: LVFLMCTKLPITLAGTLSPSRSY*FNLEPS
Trigger: TGATGGCTCTAGGTTAAATCAATATGACCTGCTGGG...GCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAAACTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR TCA 90 bp TGGCAAATTCCGTTAATAAGTTGCATTTGTGACCTTGGTTTTATACAAGCATGCTGTCTCCTTTCCGATTaGTTGGCCCAGCAGGTCATA +
Preference number: 4 (lower is better)
Translates to: WQIPLISCICDLGFIQACCLLSD*LAQQVI
Trigger: TATGACCTGCTGGGCCAATCAATCGGAAAGGAGACA...GCATGCTTGTATAAAACCAAGGTCACAAATGCAACTTATTAACGGAATTTGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
CDS-3UTR TCA 90 bp AGTTGTGTAAGCTTGGGCAAGAAAATAACTTTACTGCTTCAGATTCTTCATGAGTGTCTCCTTTCCGATTaGTTGGCCCAGCAGGTCATA +
Preference number: 4 (lower is better)
Translates to: SCVSLGKKITLLLQILHECLLSD*LAQQVI
Trigger: TATGACCTGCTGGGCCAATCAATCGGAAAGGAGACA...CTCATGAAGAATCTGAAGCAGTAAAGTTATTTTCTTGCCCAAGCTTACACAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515082.5
CDS-3UTR TCA 90 bp CTAGTTTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCGAGAATTCCGAGCACTaGTGCTTAGAGTTGTCATTG +
Preference number: 4 (lower is better)
Translates to: LVFLMCTKLPITLAGTLSENSEH*CLELSL
Trigger: CAATGACAACTCTAAGCATCAGTGCTCGGAATTCTC...GCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAAACTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR TCA 90 bp CTCATCAGTGGGAGTTTTTGGCACAATTTTCTAATCCAATATGCATGTTGCTCCGAGAATTCCGAGCACTaGTGCTTAGAGTTGTCATTG +
Preference number: 4 (lower is better)
Translates to: LISGSFWHNFLIQYACCSENSEH*CLELSL
Trigger: CAATGACAACTCTAAGCATCAGTGCTCGGAATTCTC...GGAGCAACATGCATATTGGATTAGAAAATTGTGCCAAAAACTCCCACTGATGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
CDS-3UTR TCA 90 bp TTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCACTCATCTCAATTCAAGGACTaGCCCCTAATACAGGTTCTC +
Preference number: 4 (lower is better)
Translates to: FSYVYQASNYISRDSEHSSQFKD*PLIQVL
Trigger: GAGAACCTGTATTAGGGGTCAGTCCTTGAATTGAGA...TGAGTGCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR TCA 90 bp CTAGTTTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCCTGTCTGCAGTTCCATaGGTTAGCAAATGCATGTCT +
Preference number: 4 (lower is better)
Translates to: LVFLMCTKLPITLAGTLSLSAVP*VSKCMS
Trigger: AGACATGCATTTGCTAACTCATGGAACTGCAGACAG...GCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAAACTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR TCA 90 bp AGTTTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCACCTGTCTGCAGTTCCATaGGTTAGCAAATGCATGTCT +
Preference number: 4 (lower is better)
Translates to: SFSYVYQASNYISRDSEHLSAVP*VSKCMS
Trigger: AGACATGCATTTGCTAACTCATGGAACTGCAGACAG...GTGCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR TCA 90 bp AAAGTACTTTGGTGCTCTTCTGGAATCCATGATTATATCATGGCAGGGTTTGTGTCAAAAACATGCAGATaGATGTCAGTGTGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: KVLWCSSGIHDYIMAGFVSKTCR*MSVCQE
Trigger: CTCCTGGCACACTGACATTCATCTGCATGTTTTTGA...CACAAACCCTGCCATGATATAATCATGGATTCCAGAAGAGCACCAAAGTACTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381620.9
CDS-3UTR TCA 90 bp ACAAAGGGAAATGAAGCAGTTGTAACTCAATGCATCTGGAAAGAGGGTTCTTGCCGTGAGCAAGATACATaGTCGAGAGATAAAACTGGA +
Preference number: 4 (lower is better)
Translates to: TKGNEAVVTQCIWKEGSCREQDT*SRDKTG
Trigger: TCCAGTTTTATCTCTCGATCATGTATCTTGCTCACG...GCAAGAACCCTCTTTCCAGATGCATTGAGTTACAACTGCTTCATTTCCCTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR TCA 90 bp GCGCACCATCCTTCCCCTTCCAGAGATACTTATCCAGATGCTAATGATTACACATCAATTGACAAATGGTaGATTCTACATACTGTGCCA +
Preference number: 4 (lower is better)
Translates to: AHHPSPSRDTYPDANDYTSIDKW*ILHTVP
Trigger: TGGCACAGTATGTAGAATTCACCATTTGTCAATTGA...TGTGTAATCATTAGCATCTGGATAAGTATCTCTGGAAGGGGAAGGATGGTGCGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR GCA 90 bp TGCTATCCGGGCTTTTACAATCAATCAGCAGAGACTGGAACAGGTGAAGAGGATTTGTATATGCATAGCTaGCAAATTTCAGAGGACATG +
Preference number: 4 (lower is better)
Translates to: CYPGFYNQSAETGTGEEDLYMHS*QISEDM
Trigger: CATGTCCTCTGAAATTTGGCAGCTATGCATATACAA...ATCCTCTTCACCTGTTCCAGTCTCTGCTGATTGATTGTAAAAGCCCGGATAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515082.5
CDS-3UTR GCA 90 bp ACTGGTAAGCTATGTCACTATATACATACTGTACATGTTGGATCACAAATTAGCCCAGTCCATGGCAGTTaGATAAGCCACTTTGGGGAG +
Preference number: 4 (lower is better)
Translates to: TGKLCHYIHTVHVGSQISPVHGS*ISHFGE
Trigger: CTCCCCAAAGTGGCTTATGCAACTGCCATGGACTGG...GCTAATTTGTGATCCAACATGTACAGTATGTATATAGTGACATAGCTTACCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR GCA 90 bp GAACTGCTTTCACAAGAGAAAAATGTGCCAATTAACTGCCCTTTCCTTTATAATCCAGTCCATGGCAGTTaGATAAGCCACTTTGGGGAG +
Preference number: 4 (lower is better)
Translates to: ELLSQEKNVPINCPFLYNPVHGS*ISHFGE
Trigger: CTCCCCAAAGTGGCTTATGCAACTGCCATGGACTGG...ATTATAAAGGAAAGGGCAGTTAATTGGCACATTTTTCTCTTGTGAAAGCAGTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
CDS-3UTR GCA 90 bp CAAATGCATGTCTCCATTAAAGGTCTACTGGTAAGCTATGTCACTATATACATACCAGTCCATGGCAGTTaGATAAGCCACTTTGGGGAG +
Preference number: 4 (lower is better)
Translates to: QMHVSIKGLLVSYVTIYIPVHGS*ISHFGE
Trigger: CTCCCCAAAGTGGCTTATGCAACTGCCATGGACTGG...TATGTATATAGTGACATAGCTTACCAGTAGACCTTTAATGGAGACATGCATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR GCA 90 bp ACCCTTACCAAAACCTCTTCTGGTATACAAAGCTGTTGTAAATTTGAGTCAGCGTGTTTTCGCATGGAGTaGTTTCTGTCTGCAGTTCCA +
Preference number: 4 (lower is better)
Translates to: TLTKTSSGIQSCCKFESACFRME*FLSAVP
Trigger: TGGAACTGCAGACAGAAAGCACTCCATGCGAAAACA...CGCTGACTCAAATTTACAACAGCTTTGTATACCAGAAGAGGTTTTGGTAAGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
CDS-3UTR GCA 90 bp CTAGTTTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCTGTTTTCGCATGGAGTaGTTTCTGTCTGCAGTTCCA +
Preference number: 4 (lower is better)
Translates to: LVFLMCTKLPITLAGTLSCFRME*FLSAVP
Trigger: TGGAACTGCAGACAGAAAGCACTCCATGCGAAAACA...GCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAAACTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR GCA 90 bp GGCGTGGTTGCACTCTTGGAGATGGTGGAGAGAACTGGATCTTTTGAAAGATTCTATTTGAGCTTGTCATaGTGTAATATGTACATGGCT +
Preference number: 4 (lower is better)
Translates to: GVVALLEMVERTGSFERFYLSLS*CNMYMA
Trigger: AGCCATGTACATATTACAGCATGACAAGCTCAAATA...GAATCTTTCAAAAGATCCAGTTCTCTCCACCATCTCCAAGAGTGCAACCACGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630416.2
CDS-3UTR GCA 90 bp AGTTTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCACAGCAACCAAACTGGATaGTTTTTCCAGTCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: SFSYVYQASNYISRDSEHSNQTG*FFQSPA
Trigger: TGCTGGAGACTGGAAAAAGCATCCAGTTTGGTTGCT...GTGCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
CDS-3UTR GCA 90 bp GTTTTTCAAGCTCCAAAGCCTGATCTTTTCCAAAGTACACTATATTGTGTCTCAATCAAGGTATGGGTGTaGTGTGCTCCTTTCTGGAGC +
Preference number: 4 (lower is better)
Translates to: VFQAPKPDLFQSTLYCVSIKVWV*CAPFWS
Trigger: GCTCCAGAAAGGAGCACAGCACACCCATACCTTGAT...TGAGACACAATATAGTGTACTTTGGAAAAGATCAGGCTTTGGAGCTTGAAAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR GCA 90 bp AGAACCTTGAAAACAGATGACTCAGTCCAGTGTTTGGACCATGTGCATCAGAATTATGTCTTGGTTCTCTaGTCAGATTCTCACATGGCT +
Preference number: 4 (lower is better)
Translates to: RTLKTDDSVQCLDHVHQNYVLVL*SDSHMA
Trigger: AGCCATGTGAGAATCTGAGCAGAGAACCAAGACATA...ATTCTGATGCACATGGTCCAAACACTGGACTGAGTCATCTGTTTTCAAGGTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR GCA 90 bp CATGGTATACAGCAGAGTCCCATCATCCTGAATTCGAAGCAACTTATTTGGCATCAGTTGTTACTCAGCTaGCAAATTTCAGAGGACATG +
Preference number: 4 (lower is better)
Translates to: HGIQQSPIILNSKQLIWHQLLLS*QISEDM
Trigger: CATGTCCTCTGAAATTTGGCAGCTGAGTAACAACTG...ATGCCAAATAAGTTGCTTCGAATTCAGGATGATGGGACTCTGCTGTATACCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513005.5
CDS-3UTR CCA 90 bp CTAGTTTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCTTAGCCTCATCTTCTTaGATGTTAGCCAGCACCAAC +
Preference number: 4 (lower is better)
Translates to: LVFLMCTKLPITLAGTLSLASSS*MLASTN
Trigger: GTTGGTGCTGGCTAACATCCAAGAAGATGAGGCTAA...GCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAAACTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR CCA 90 bp AGTTTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCACTTAGCCTCATCTTCTTaGATGTTAGCCAGCACCAAC +
Preference number: 4 (lower is better)
Translates to: SFSYVYQASNYISRDSEHLASSS*MLASTN
Trigger: GTTGGTGCTGGCTAACATCCAAGAAGATGAGGCTAA...GTGCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR CCA 90 bp TTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCACTCATTAGCCTCATCTTCTTaGATGTTAGCCAGCACCAAC +
Preference number: 4 (lower is better)
Translates to: FSYVYQASNYISRDSEHSLASSS*MLASTN
Trigger: GTTGGTGCTGGCTAACATCCAAGAAGATGAGGCTAA...TGAGTGCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR CCA 90 bp ACCCTTACCAAAACCTCTTCTGGTATACAAAGCTGTTGTAAATTTGAGTCAGCGATCCTCCAAGTGCATTaGGCATTCAGCTTGAACTGT +
Preference number: 4 (lower is better)
Translates to: TLTKTSSGIQSCCKFESAILQVH*AFSLNC
Trigger: ACAGTTCAAGCTGAATGCCCAATGCACTTGGAGGAT...CGCTGACTCAAATTTACAACAGCTTTGTATACCAGAAGAGGTTTTGGTAAGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
CDS-3UTR CCA 90 bp TGGGTCTCAATTCAAGGACTGACCCCTAATACAGGTTCTCTGTTTAAATATGTAGATTCGGGGCATAATTaGCAACAGCCACTGCATAAG +
Preference number: 4 (lower is better)
Translates to: WVSIQGLTPNTGSLFKYVDSGHN*QQPLHK
Trigger: CTTATGCAGTGGCTGTTGCCAATTATGCCCCGAATC...TACATATTTAAACAGAGAACCTGTATTAGGGGTCAGTCCTTGAATTGAGACCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000510233.5
ENST00000513005.5
ENST00000630416.2
CDS-3UTR CCA 90 bp CTAGTTTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCCACTCTTGGAGATGGTaGAGAGAACTGGATCTTTTG +
Preference number: 4 (lower is better)
Translates to: LVFLMCTKLPITLAGTLSHSWRW*RELDLL
Trigger: CAAAAGATCCAGTTCTCTCCACCATCTCCAAGAGTG...GCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAAACTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR CCA 90 bp ACCCTTACCAAAACCTCTTCTGGTATACAAAGCTGTTGTAAATTTGAGTCAGCGCACTCTTGGAGATGGTaGAGAGAACTGGATCTTTTG +
Preference number: 4 (lower is better)
Translates to: TLTKTSSGIQSCCKFESAHSWRW*RELDLL
Trigger: CAAAAGATCCAGTTCTCTCCACCATCTCCAAGAGTG...CGCTGACTCAAATTTACAACAGCTTTGTATACCAGAAGAGGTTTTGGTAAGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
CDS-3UTR CCA 90 bp AGTTTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCACCACTCTTGGAGATGGTaGAGAGAACTGGATCTTTTG +
Preference number: 4 (lower is better)
Translates to: SFSYVYQASNYISRDSEHHSWRW*RELDLL
Trigger: CAAAAGATCCAGTTCTCTCCACCATCTCCAAGAGTG...GTGCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR CCA 90 bp AGTTTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCACTTGCACTCTTGGAGATaGTGGAGAGAACTGGATCTT +
Preference number: 4 (lower is better)
Translates to: SFSYVYQASNYISRDSEHLHSWR*WRELDL
Trigger: AAGATCCAGTTCTCTCCACCATCTCCAAGAGTGCAA...GTGCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR CCA 90 bp TTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCACTCATTGCACTCTTGGAGATaGTGGAGAGAACTGGATCTT +
Preference number: 4 (lower is better)
Translates to: FSYVYQASNYISRDSEHSLHSWR*WRELDL
Trigger: AAGATCCAGTTCTCTCCACCATCTCCAAGAGTGCAA...TGAGTGCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR CCA 90 bp ACTGGTAAGCTATGTCACTATATACATACTGTACATGTTGGATCACAAATTAGCGCGTGGTTGCACTCTTaGAGATGGTGGAGAGAACTG +
Preference number: 4 (lower is better)
Translates to: TGKLCHYIHTVHVGSQISAWLHS*RWWREL
Trigger: CAGTTCTCTCCACCATCTCCAAGAGTGCAACCACGC...GCTAATTTGTGATCCAACATGTACAGTATGTATATAGTGACATAGCTTACCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR CCA 90 bp CAAATGCATGTCTCCATTAAAGGTCTACTGGTAAGCTATGTCACTATATACATAGCGTGGTTGCACTCTTaGAGATGGTGGAGAGAACTG +
Preference number: 4 (lower is better)
Translates to: QMHVSIKGLLVSYVTIYIAWLHS*RWWREL
Trigger: CAGTTCTCTCCACCATCTCCAAGAGTGCAACCACGC...TATGTATATAGTGACATAGCTTACCAGTAGACCTTTAATGGAGACATGCATTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR CCA 90 bp ACTGGTAAGCTATGTCACTATATACATACTGTACATGTTGGATCACAAATTAGCTGTTGGGTTCTGGCGTaGTTGCACTCTTGGAGATGG +
Preference number: 4 (lower is better)
Translates to: TGKLCHYIHTVHVGSQISCWVLA*LHSWRW
Trigger: CCATCTCCAAGAGTGCAACCACGCCAGAACCCAACA...GCTAATTTGTGATCCAACATGTACAGTATGTATATAGTGACATAGCTTACCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR CCA 90 bp CAAATGCATGTCTCCATTAAAGGTCTACTGGTAAGCTATGTCACTATATACATATGTTGGGTTCTGGCGTaGTTGCACTCTTGGAGATGG +
Preference number: 4 (lower is better)
Translates to: QMHVSIKGLLVSYVTIYICWVLA*LHSWRW
Trigger: CCATCTCCAAGAGTGCAACCACGCCAGAACCCAACA...TATGTATATAGTGACATAGCTTACCAGTAGACCTTTAATGGAGACATGCATTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR CCA 90 bp CTCATCAGTGGGAGTTTTTGGCACAATTTTCTAATCCAATATGCATGTTGCTCCCCTTTCTTCTTTCATTaGAATGATGACCGGCCATGC +
Preference number: 4 (lower is better)
Translates to: LISGSFWHNFLIQYACCSPFFFH*NDDRPC
Trigger: GCATGGCCGGTCATCATTCCAATGAAAGAAGAAAGG...GGAGCAACATGCATATTGGATTAGAAAATTGTGCCAAAAACTCCCACTGATGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381620.9
CDS-3UTR CCA 90 bp AGGTTCCTCACATTCTCTCTGCATGTGATCGTATTATTAATTTGTAGCAAAGGATTGCAATCCCACCGGTaGCATCCCTTGGGATCAATT +
Preference number: 4 (lower is better)
Translates to: RFLTFSLHVIVLLICSKGLQSHR*HPLGSI
Trigger: AATTGATCCCAAGGGATGCCACCGGTGGGATTGCAA...TCCTTTGCTACAAATTAATAATACGATCACATGCAGAGAGAATGTGAGGAACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381620.9
CDS-3UTR CCA 90 bp CGGGGCATAATTGGCAACAGCCACTGCATAAGCGTTGTTCTGTATCATAACGGATTTCTTGGAATAAACTaGGCCATGAGAAAGCTATAT +
Preference number: 4 (lower is better)
Translates to: RGIIGNSHCISVVLYHNGFLGIN*AMRKLY
Trigger: ATATAGCTTTCTCATGGCCCAGTTTATTCCAAGAAA...TCCGTTATGATACAGAACAACGCTTATGCAGTGGCTGTTGCCAATTATGCCCCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630416.2
CDS-3UTR CCA 90 bp ACAAAGGGAAATGAAGCAGTTGTAACTCAATGCATCTGGAAAGAGGGTTCTTGCAAACCTCTTTATTCCTaGGAGCTTTGGAAAAAGGGC +
Preference number: 4 (lower is better)
Translates to: TKGNEAVVTQCIWKEGSCKPLYS*ELWKKG
Trigger: GCCCTTTTTCCAAAGCTCCCAGGAATAAAGAGGTTT...GCAAGAACCCTCTTTCCAGATGCATTGAGTTACAACTGCTTCATTTCCCTTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR CCA 90 bp AATCTCCATTATGCTCCACTCATTCCTTTATTTGTTCTGCCCATGGAGAGCATTGTAGCAAACCACACATaGTCTCTTCCTCACCTATCT +
Preference number: 4 (lower is better)
Translates to: NLHYAPLIPLFVLPMESIVANHT*SLPHLS
Trigger: AGATAGGTGAGGAAGAGACCATGTGTGGTTTGCTAC...AATGCTCTCCATGGGCAGAACAAATAAAGGAATGAGTGGAGCATAATGGAGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR CCA 90 bp AATCTCCATTATGCTCCACTCATTCCTTTATTTGTTCTGCCCATGGAGAGCATTGTAAAGTGCTTAGCATaGCACCTCAATCTCAGAACC +
Preference number: 4 (lower is better)
Translates to: NLHYAPLIPLFVLPMESIVKCLA*HLNLRT
Trigger: GGTTCTGAGATTGAGGTGCCATGCTAAGCACTTTAC...AATGCTCTCCATGGGCAGAACAAATAAAGGAATGAGTGGAGCATAATGGAGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR CCA 90 bp CATAATCAATTGACAAATGGTGAATTCTACATACTGTGCCAAGCACTAAGGACATCCCATTTTCCCTGCTaGCTGTCAAGTCTCATCTCC +
Preference number: 4 (lower is better)
Translates to: HNQLTNGEFYILCQALRTSHFPC*LSSLIS
Trigger: GGAGATGAGACTTGACAGCCAGCAGGGAAAATGGGA...TGTCCTTAGTGCTTGGCACAGTATGTAGAATTCACCATTTGTCAATTGATTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR CCA 90 bp GAACTGGATCTTTTGAAAGATTCGGGGCATAATTGGCAACAGCCACTGCATAAGAGTATATTCACCTCATaGTATACAGCAGAGTCCCAT +
Preference number: 4 (lower is better)
Translates to: ELDLLKDSGHNWQQPLHKSIFTS*YTAESH
Trigger: ATGGGACTCTGCTGTATACCATGAGGTGAATATACT...CTTATGCAGTGGCTGTTGCCAATTATGCCCCGAATCTTTCAAAAGATCCAGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510233.5
3UTR CAA 72 bp TGCTTGCCTTCTGGCATTGTGTACTTCCTTATACAATaGCACACATCCCTAAACTATACAGAAGAGCTATGC +
Preference number: 4 (lower is better)
Translates to: CLPSGIVYFLIQ*HTSLNYTEELC
Trigger: GCATAGCTCTTCTGTATAGTTTAGGGATGTGTGCAATTGTATAAGGAAGTACACAATGCCAGAAGGCAAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381620.9
3UTR CAA 72 bp ACCAGAACCTTGAAAACAGATGACTCAGTCCAGTGTTaGGACCATGTGCATCAGAATCAAGAACATTTGTTG +
Preference number: 4 (lower is better)
Translates to: TRTLKTDDSVQC*DHVHQNQEHLL
Trigger: CAACAAATGTTCTTGATTCTGATGCACATGGTCCAAACACTGGACTGAGTCATCTGTTTTCAAGGTTCTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507460.1
3UTR CAA 72 bp GTTAATGTAATGCCTTCAGCTTTTATTGAAGGGGACTaGTCATTTACTACACTCTTCCCATCCCAAGCCCAT +
Preference number: 4 (lower is better)
Translates to: VNVMPSAFIEGD*SFTTLFPSQAH
Trigger: ATGGGCTTGGGATGGGAAGAGTGTAGTAAATGACAAGTCCCCTTCAATAAAAGCTGAAGGCATTACATTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630416.2
CDS-3UTR TCA 90 bp ACTGGTAAGCTATGTCACTATATACATACTGTACATGTTGGATCACAAATTAGCTGTCTCCTTTCCGATTaGTTGGCCCAGCAGGTCATA +
Preference number: 4 (lower is better)
Translates to: TGKLCHYIHTVHVGSQISCLLSD*LAQQVI
Trigger: TATGACCTGCTGGGCCAATCAATCGGAAAGGAGACA...GCTAATTTGTGATCCAACATGTACAGTATGTATATAGTGACATAGCTTACCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR TCA 90 bp AGTTTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCACTCTGTTAAGCCAGAATaGAACTTGGGAGAGAATGAC +
Preference number: 4 (lower is better)
Translates to: SFSYVYQASNYISRDSEHSVKPE*NLGEND
Trigger: GTCATTCTCTCCCAAGTTTCATTCTGGCTTAACAGA...GTGCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAAACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR TCA 90 bp TTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCACTCATCTGTTAAGCCAGAATaGAACTTGGGAGAGAATGAC +
Preference number: 4 (lower is better)
Translates to: FSYVYQASNYISRDSEHSSVKPE*NLGEND
Trigger: GTCATTCTCTCCCAAGTTTCATTCTGGCTTAACAGA...TGAGTGCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR TCA 90 bp AAACAATACTCCCCGCCCCACCTACTACAAATAATTAGTTTGAGGATCAAGAGATCTGTTAAGCCAGAATaGAACTTGGGAGAGAATGAC +
Preference number: 4 (lower is better)
Translates to: KQYSPPHLLQIISLRIKRSVKPE*NLGEND
Trigger: GTCATTCTCTCCCAAGTTTCATTCTGGCTTAACAGA...TCTCTTGATCCTCAAACTAATTATTTGTAGTAGGTGGGGCGGGGAGTATTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514236.1
CDS-3UTR TCA 90 bp TGGGTCTCAATTCAAGGACTGACCCCTAATACAGGTTCTCTGTTTAAATATGTAGAGAATTCCGAGCACTaGTGCTTAGAGTTGTCATTG +
Preference number: 4 (lower is better)
Translates to: WVSIQGLTPNTGSLFKYVENSEH*CLELSL
Trigger: CAATGACAACTCTAAGCATCAGTGCTCGGAATTCTC...TACATATTTAAACAGAGAACCTGTATTAGGGGTCAGTCCTTGAATTGAGACCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000510233.5
ENST00000513005.5
ENST00000630416.2
CDS-3UTR TCA 90 bp AATTCTCATCAGTGGGAGTTTTTGGCACAATTTTCTAATCCAATATGCATGTTGAGTGTGGGGCACCTATaGATTCTCATCAGTGGGAGT +
Preference number: 4 (lower is better)
Translates to: NSHQWEFLAQFSNPICMLSVGHL*ILISGS
Trigger: ACTCCCACTGATGAGAATTCATAGGTGCCCCACACT...CAACATGCATATTGGATTAGAAAATTGTGCCAAAAACTCCCACTGATGAGAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
CDS-3UTR TCA 90 bp TACTCCCCGCCCCACCTACTACAAATAATTAGTTTGAGGATCAAGAGAGATAATACTATGTTACCACTCTaGGCCTACTTCTTCACCTAT +
Preference number: 4 (lower is better)
Translates to: YSPPHLLQIISLRIKRDNTMLPL*AYFFTY
Trigger: ATAGGTGAAGAAGTAGGCTCAGAGTGGTAACATAGT...ATTATCTCTCTTGATCCTCAAACTAATTATTTGTAGTAGGTGGGGCGGGGAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514236.1
CDS-3UTR GCA 90 bp CAAATGCATGTCTCCATTAAAGGTCTACTGGTAAGCTATGTCACTATATACATAAATAATTTCCCTTCCTaGCCACCCACGGTTGCCCAA +
Preference number: 4 (lower is better)
Translates to: QMHVSIKGLLVSYVTIYINNFPS*PPTVAQ
Trigger: TTGGGCAACCGTGGGTGGGCAGGAAGGGAAATTATT...TATGTATATAGTGACATAGCTTACCAGTAGACCTTTAATGGAGACATGCATTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356504.5
ENST00000514090.5
CDS-3UTR GCA 90 bp AGTTTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCACTACATTACAGTGAACTaGGGTCCTCACGTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: SFSYVYQASNYISRDSEHYITVN*GPHVFF
Trigger: AAAGAAGACGTGAGGACCGCAGTTCACTGTAATGTA...GTGCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAAACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356504.5
ENST00000514090.5
CDS-3UTR GCA 90 bp CTAGTTTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCCAGGCAGCCCACTTTTaGAATTACTCTACATTACAG +
Preference number: 4 (lower is better)
Translates to: LVFLMCTKLPITLAGTLSQAAHF*NYSTLQ
Trigger: CTGTAATGTAGAGTAATTGCAAAAGTGGGCTGCCTG...GCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAAACTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356504.5
CDS-3UTR GCA 90 bp CTAGTTTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCTCCAAACACAGTTCTTaGAGGCACAGATTCTCTGTT +
Preference number: 4 (lower is better)
Translates to: LVFLMCTKLPITLAGTLSSKHSS*RHRFSV
Trigger: AACAGAGAATCTGTGCCTGCAAGAACTGTGTTTGGA...GCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAAACTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR GCA 90 bp TTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCACTCAATTGGCAACAGCCACTaGATAAGCGTTGTTCTGTAT +
Preference number: 4 (lower is better)
Translates to: FSYVYQASNYISRDSEHSIGNSH*ISVVLY
Trigger: ATACAGAACAACGCTTATGCAGTGGCTGTTGCCAAT...TGAGTGCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR GCA 90 bp AGTTTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCACATCCAATATGCATGTTaGTCCACAGCAACCAAACTG +
Preference number: 4 (lower is better)
Translates to: SFSYVYQASNYISRDSEHIQYAC*STATKL
Trigger: CAGTTTGGTTGCTGTGGAGCAACATGCATATTGGAT...GTGCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAAACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
CDS-3UTR GCA 90 bp ACCCTTACCAAAACCTCTTCTGGTATACAAAGCTGTTGTAAATTTGAGTCAGCGATCCAATATGCATGTTaGTCCACAGCAACCAAACTG +
Preference number: 4 (lower is better)
Translates to: TLTKTSSGIQSCCKFESAIQYAC*STATKL
Trigger: CAGTTTGGTTGCTGTGGAGCAACATGCATATTGGAT...CGCTGACTCAAATTTACAACAGCTTTGTATACCAGAAGAGGTTTTGGTAAGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
CDS-3UTR GCA 90 bp CTGATCTTTTCCAAAGTACACTATATTGTGTCTCATAAGATGTACATGGGTCAAGTTCCGATCAAGTGCTaGGAAACGACGCGTTTGACA +
Preference number: 4 (lower is better)
Translates to: LIFSKVHYIVSHKMYMGQVPIKC*ETTRLT
Trigger: TGTCAAACGCGTCGTTTCGCAGCACTTGATCGGAAC...TTGACCCATGTACATCTTATGAGACACAATATAGTGTACTTTGGAAAAGATCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR GCA 90 bp GCGCACCATCCTTCCCCTTCCAGAGATACTTATCCAGATGCTAATGATTACACACTTCAATCTCCATTATaGTCCACTCATTCCTTTATT +
Preference number: 4 (lower is better)
Translates to: AHHPSPSRDTYPDANDYTLQSPL*STHSFI
Trigger: AATAAAGGAATGAGTGGAGCATAATGGAGATTGAAG...TGTGTAATCATTAGCATCTGGATAAGTATCTCTGGAAGGGGAAGGATGGTGCGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR GCA 90 bp ACAAAGGGAAATGAAGCAGTTGTAACTCAATGCATCTGGAAAGAGGGTTCTTGCTTTGTTCATGATCACTaGTCAGATGGTCTGAAAAGC +
Preference number: 4 (lower is better)
Translates to: TKGNEAVVTQCIWKEGSCFVHDH*SDGLKS
Trigger: GCTTTTCAGACCATCTGAGCAGTGATCATGAACAAA...GCAAGAACCCTCTTTCCAGATGCATTGAGTTACAACTGCTTCATTTCCCTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR GCA 90 bp TACTCCCCGCCCCACCTACTACAAATAATTAGTTTGAGGATCAAGAGAGATAATACCAAACACAGTTCTTaGAGGCACAGATTCTCTGTT +
Preference number: 4 (lower is better)
Translates to: YSPPHLLQIISLRIKRDNTKHSS*RHRFSV
Trigger: AACAGAGAATCTGTGCCTGCAAGAACTGTGTTTGGT...ATTATCTCTCTTGATCCTCAAACTAATTATTTGTAGTAGGTGGGGCGGGGAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514236.1
CDS-3UTR CCA 90 bp TGTTCAACCCTTACCAAAACCTCTTCTGGTATACAAAGCTGTTGTAAATTTGAGACTGTCTCCCAGTCCTaGTCTAAGCCGATTATCGTA +
Preference number: 4 (lower is better)
Translates to: CSTLTKTSSGIQSCCKFETVSQS*SKPIIV
Trigger: TACGATAATCGGCTTAGACCAGGACTGGGAGACAGT...CTCAAATTTACAACAGCTTTGTATACCAGAAGAGGTTTTGGTAAGGGTTGAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
CDS-3UTR CCA 90 bp TGTTCAACCCTTACCAAAACCTCTTCTGGTATACAAAGCTGTTGTAAATTTGAGGATTCGGGGCATAATTaGCAACAGCCACTGCATAAG +
Preference number: 4 (lower is better)
Translates to: CSTLTKTSSGIQSCCKFEDSGHN*QQPLHK
Trigger: CTTATGCAGTGGCTGTTGCCAATTATGCCCCGAATC...CTCAAATTTACAACAGCTTTGTATACCAGAAGAGGTTTTGGTAAGGGTTGAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
CDS-3UTR CCA 90 bp TGGGTCTCAATTCAAGGACTGACCCCTAATACAGGTTCTCTGTTTAAATATGTATTGCACTCTTGGAGATaGTGGAGAGAACTGGATCTT +
Preference number: 4 (lower is better)
Translates to: WVSIQGLTPNTGSLFKYVLHSWR*WRELDL
Trigger: AAGATCCAGTTCTCTCCACCATCTCCAAGAGTGCAA...TACATATTTAAACAGAGAACCTGTATTAGGGGTCAGTCCTTGAATTGAGACCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000510233.5
ENST00000513005.5
ENST00000630416.2
CDS-3UTR CCA 90 bp GAACTGCTTTCACAAGAGAAAAATGTGCCAATTAACTGCCCTTTCCTTTATAATCTTCTTGTTGGGTTCTaGCGTGGTTGCACTCTTGGA +
Preference number: 4 (lower is better)
Translates to: ELLSQEKNVPINCPFLYNLLVGF*RGCTLG
Trigger: TCCAAGAGTGCAACCACGCCAGAACCCAACAAGAAG...ATTATAAAGGAAAGGGCAGTTAATTGGCACATTTTTCTCTTGTGAAAGCAGTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
CDS-3UTR CCA 90 bp AATTCTCATCAGTGGGAGTTTTTGGCACAATTTTCTAATCCAATATGCATGTTGCTTCTTGTTGGGTTCTaGCGTGGTTGCACTCTTGGA +
Preference number: 4 (lower is better)
Translates to: NSHQWEFLAQFSNPICMLLLVGF*RGCTLG
Trigger: TCCAAGAGTGCAACCACGCCAGAACCCAACAAGAAG...CAACATGCATATTGGATTAGAAAATTGTGCCAAAAACTCCCACTGATGAGAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
CDS-3UTR CCA 90 bp CAAATGCATGTCTCCATTAAAGGTCTACTGGTAAGCTATGTCACTATATACATACTTCTTGTTGGGTTCTaGCGTGGTTGCACTCTTGGA +
Preference number: 4 (lower is better)
Translates to: QMHVSIKGLLVSYVTIYILLVGF*RGCTLG
Trigger: TCCAAGAGTGCAACCACGCCAGAACCCAACAAGAAG...TATGTATATAGTGACATAGCTTACCAGTAGACCTTTAATGGAGACATGCATTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR CCA 90 bp AATTCTCATCAGTGGGAGTTTTTGGCACAATTTTCTAATCCAATATGCATGTTGTTTCTGGCTTCTTGTTaGGTTCTGGCGTGGTTGCAC +
Preference number: 4 (lower is better)
Translates to: NSHQWEFLAQFSNPICMLFLASC*VLAWLH
Trigger: GTGCAACCACGCCAGAACCCAACAAGAAGCCAGAAA...CAACATGCATATTGGATTAGAAAATTGTGCCAAAAACTCCCACTGATGAGAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
CDS-3UTR CCA 90 bp TGTTCAACCCTTACCAAAACCTCTTCTGGTATACAAAGCTGTTGTAAATTTGAGATGGCTGTTTTCGCATaGAGTGCTTTCTGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: CSTLTKTSSGIQSCCKFEMAVFA*SAFCLQ
Trigger: CTGCAGACAGAAAGCACTCCATGCGAAAACAGCCAT...CTCAAATTTACAACAGCTTTGTATACCAGAAGAGGTTTTGGTAAGGGTTGAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
CDS-3UTR CCA 90 bp CTAGTTTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCGTGTTTGTCATAGTGTaGGGCACCTATGAATTCTCA +
Preference number: 4 (lower is better)
Translates to: LVFLMCTKLPITLAGTLSVFVIV*GTYEFS
Trigger: TGAGAATTCATAGGTGCCCCACACTATGACAAACAC...GCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAAACTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
CDS-3UTR CCA 90 bp AAAGTACTTTGGTGCTCTTCTGGAATCCATGATTATATCATGGCAGGGTTTGTGTCCATGATTATATCATaGCAGGGTTTGTGTCCCTCA +
Preference number: 4 (lower is better)
Translates to: KVLWCSSGIHDYIMAGFVSMIIS*QGLCPS
Trigger: TGAGGGACACAAACCCTGCCATGATATAATCATGGA...CACAAACCCTGCCATGATATAATCATGGATTCCAGAAGAGCACCAAAGTACTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381620.9
CDS-3UTR CCA 90 bp CATAATCAATTGACAAATGGTGAATTCTACATACTGTGCCAAGCACTAAGGACAGTTTCCTTTGAACAATaGACTGTGGGCAGAGGGACA +
Preference number: 4 (lower is better)
Translates to: HNQLTNGEFYILCQALRTVSFEQ*TVGRGT
Trigger: TGTCCCTCTGCCCACAGTCCATTGTTCAAAGGAAAC...TGTCCTTAGTGCTTGGCACAGTATGTAGAATTCACCATTTGTCAATTGATTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR CCA 90 bp ACAAAGGGAAATGAAGCAGTTGTAACTCAATGCATCTGGAAAGAGGGTTCTTGCGTAACTCAATGCATCTaGAAAGAGGGTTCTTGCATT +
Preference number: 4 (lower is better)
Translates to: TKGNEAVVTQCIWKEGSCVTQCI*KEGSCI
Trigger: AATGCAAGAACCCTCTTTCCAGATGCATTGAGTTAC...GCAAGAACCCTCTTTCCAGATGCATTGAGTTACAACTGCTTCATTTCCCTTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR CCA 90 bp AGAACCTTGAAAACAGATGACTCAGTCCAGTGTTTGGACCATGTGCATCAGAATCTCATAAGATGTACATaGGTCAAATGGGAACAAAGG +
Preference number: 4 (lower is better)
Translates to: RTLKTDDSVQCLDHVHQNLIRCT*VKWEQR
Trigger: CCTTTGTTCCCATTTGACCCATGTACATCTTATGAG...ATTCTGATGCACATGGTCCAAACACTGGACTGAGTCATCTGTTTTCAAGGTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR CCA 90 bp CATAATCAATTGACAAATGGTGAATTCTACATACTGTGCCAAGCACTAAGGACAAGGCACATGGGAAGTTaGCCACTAATGAACACCCAA +
Preference number: 4 (lower is better)
Translates to: HNQLTNGEFYILCQALRTRHMGS*PLMNTQ
Trigger: TTGGGTGTTCATTAGTGGCCAACTTCCCATGTGCCT...TGTCCTTAGTGCTTGGCACAGTATGTAGAATTCACCATTTGTCAATTGATTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR TCA 90 bp ACTGGTAAGCTATGTCACTATATACATACTGTACATGTTGGATCACAAATTAGCTACTCTACATTACAGTaGACTGCGGTCCTCACGTCT +
Preference number: 4 (lower is better)
Translates to: TGKLCHYIHTVHVGSQISYSTLQ*TAVLTS
Trigger: AGACGTGAGGACCGCAGTTCACTGTAATGTAGAGTA...GCTAATTTGTGATCCAACATGTACAGTATGTATATAGTGACATAGCTTACCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356504.5
ENST00000514090.5
CDS-3UTR TCA 90 bp CTAGTTTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCAGAGTCCCATCATCCTaGATTCGAAGCAACTTATTT +
Preference number: 4 (lower is better)
Translates to: LVFLMCTKLPITLAGTLSRVPSS*IRSNLF
Trigger: AAATAAGTTGCTTCGAATTCAGGATGATGGGACTCT...GCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAAACTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR TCA 90 bp TTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCACTCAAGAGTCCCATCATCCTaGATTCGAAGCAACTTATTT +
Preference number: 4 (lower is better)
Translates to: FSYVYQASNYISRDSEHSRVPSS*IRSNLF
Trigger: AAATAAGTTGCTTCGAATTCAGGATGATGGGACTCT...TGAGTGCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR TCA 90 bp TGGCAAATTCCGTTAATAAGTTGCATTTGTGACCTTGGTTTTATACAAGCATGCATTGGGCATTCAGCTTaGACTGTAAGCCTCATGGTA +
Preference number: 4 (lower is better)
Translates to: WQIPLISCICDLGFIQACIGHSA*TVSLMV
Trigger: TACCATGAGGCTTACAGTTCAAGCTGAATGCCCAAT...GCATGCTTGTATAAAACCAAGGTCACAAATGCAACTTATTAACGGAATTTGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
CDS-3UTR TCA 90 bp AGTTGTGTAAGCTTGGGCAAGAAAATAACTTTACTGCTTCAGATTCTTCATGAGATTGGGCATTCAGCTTaGACTGTAAGCCTCATGGTA +
Preference number: 4 (lower is better)
Translates to: SCVSLGKKITLLLQILHEIGHSA*TVSLMV
Trigger: TACCATGAGGCTTACAGTTCAAGCTGAATGCCCAAT...CTCATGAAGAATCTGAAGCAGTAAAGTTATTTTCTTGCCCAAGCTTACACAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515082.5
CDS-3UTR TCA 90 bp TGTTCAACCCTTACCAAAACCTCTTCTGGTATACAAAGCTGTTGTAAATTTGAGTTCAGAGGACATGAATaGGCATCCATTGGGAAATCC +
Preference number: 4 (lower is better)
Translates to: CSTLTKTSSGIQSCCKFEFRGHE*ASIGKS
Trigger: GGATTTCCCAATGGATGCTCATTCATGTCCTCTGAA...CTCAAATTTACAACAGCTTTGTATACCAGAAGAGGTTTTGGTAAGGGTTGAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
CDS-3UTR TCA 90 bp TCCCATCATCCTGAATTCGAAGCAACTTATTTGGCATTGTCATATTATGAGCTATTCAGAGGACATGAATaGGCATCCATTGGGAAATCC +
Preference number: 4 (lower is better)
Translates to: SHHPEFEATYLALSYYELFRGHE*ASIGKS
Trigger: GGATTTCCCAATGGATGCTCATTCATGTCCTCTGAA...TAGCTCATAATATGACAATGCCAAATAAGTTGCTTCGAATTCAGGATGATGGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000513005.5
ENST00000514193.5
ENST00000630416.2
CDS-3UTR TCA 90 bp GTTAAAACCATGAACTTAACAGTCAGACAGGTAGATCGGAGTTCAAGTATACTTCCCAGCAGGTCATATTaGTTTAACCTAGAGCCATCA +
Preference number: 4 (lower is better)
Translates to: VKTMNLTVRQVDRSSSILPSRSY*FNLEPS
Trigger: TGATGGCTCTAGGTTAAATCAATATGACCTGCTGGG...AAGTATACTTGAACTCCGATCTACCTGTCTGACTGTTAAGTTCATGGTTTTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515082.5
CDS-3UTR TCA 90 bp TGGGTCTCAATTCAAGGACTGACCCCTAATACAGGTTCTCTGTTTAAATATGTATCTGTTAAGCCAGAATaGAACTTGGGAGAGAATGAC +
Preference number: 4 (lower is better)
Translates to: WVSIQGLTPNTGSLFKYVSVKPE*NLGEND
Trigger: GTCATTCTCTCCCAAGTTTCATTCTGGCTTAACAGA...TACATATTTAAACAGAGAACCTGTATTAGGGGTCAGTCCTTGAATTGAGACCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510233.5
ENST00000630416.2
CDS-3UTR TCA 90 bp AGTTTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCACGAGAACTGGATCTTTTaGAAGATTCGGGGCATAATT +
Preference number: 4 (lower is better)
Translates to: SFSYVYQASNYISRDSEHENWIF*KIRGII
Trigger: AATTATGCCCCGAATCTTTCAAAAGATCCAGTTCTC...GTGCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAAACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR TCA 90 bp TTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCACTCAGAGAACTGGATCTTTTaGAAGATTCGGGGCATAATT +
Preference number: 4 (lower is better)
Translates to: FSYVYQASNYISRDSEHSENWIF*KIRGII
Trigger: AATTATGCCCCGAATCTTTCAAAAGATCCAGTTCTC...TGAGTGCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR TCA 90 bp CTCATCAGTGGGAGTTTTTGGCACAATTTTCTAATCCAATATGCATGTTGCTCCGAGAACTGGATCTTTTaGAAGATTCGGGGCATAATT +
Preference number: 4 (lower is better)
Translates to: LISGSFWHNFLIQYACCSENWIF*KIRGII
Trigger: AATTATGCCCCGAATCTTTCAAAAGATCCAGTTCTC...GGAGCAACATGCATATTGGATTAGAAAATTGTGCCAAAAACTCCCACTGATGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
CDS-3UTR TCA 90 bp CTAGTTTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCGAGAACTGGATCTTTTaGAAGATTCGGGGCATAATT +
Preference number: 4 (lower is better)
Translates to: LVFLMCTKLPITLAGTLSENWIF*KIRGII
Trigger: AATTATGCCCCGAATCTTTCAAAAGATCCAGTTCTC...GCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAAACTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR TCA 90 bp TTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCACTCAACTCATGAACAGAGCTaGTGTCAGATACAATGTTTG +
Preference number: 4 (lower is better)
Translates to: FSYVYQASNYISRDSEHSTHEQS*CQIQCL
Trigger: CAAACATTGTATCTGACATCAGCTCTGTTCATGAGT...TGAGTGCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR TCA 90 bp CTAGTTTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCACTCATGAACAGAGCTaGTGTCAGATACAATGTTTG +
Preference number: 4 (lower is better)
Translates to: LVFLMCTKLPITLAGTLSTHEQS*CQIQCL
Trigger: CAAACATTGTATCTGACATCAGCTCTGTTCATGAGT...GCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAAACTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR TCA 90 bp AGTTTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCACACTCATGAACAGAGCTaGTGTCAGATACAATGTTTG +
Preference number: 4 (lower is better)
Translates to: SFSYVYQASNYISRDSEHTHEQS*CQIQCL
Trigger: CAAACATTGTATCTGACATCAGCTCTGTTCATGAGT...GTGCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAAACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR TCA 90 bp AGATGGCATGTTATCATCTTCATGAAGTATCTATTCCTACCTAATAAAGGGGCAACAGAGGCCTCTCTTTaGGGTTTTGAGGAAAATGCT +
Preference number: 4 (lower is better)
Translates to: RWHVIIFMKYLFLPNKGATEASL*GFEENA
Trigger: AGCATTTTCCTCAAAACCTCAAAGAGAGGCCTCTGT...TGCCCCTTTATTAGGTAGGAATAGATACTTCATGAAGATGATAACATGCCATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR TCA 90 bp GTTTTTCAAGCTCCAAAGCCTGATCTTTTCCAAAGTACACTATATTGTGTCTCAACAAAAGTAGGACTCTaGCCTTGTAACACTGACAGC +
Preference number: 4 (lower is better)
Translates to: VFQAPKPDLFQSTLYCVSTKVGL*PCNTDS
Trigger: GCTGTCAGTGTTACAAGGTCAGAGTCCTACTTTTGT...TGAGACACAATATAGTGTACTTTGGAAAAGATCAGGCTTTGGAGCTTGAAAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR TCA 90 bp CATAATCAATTGACAAATGGTGAATTCTACATACTGTGCCAAGCACTAAGGACAGTATATGGTTTCCTTTaGACAATGGACTGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: HNQLTNGEFYILCQALRTVYGFL*TMDCGQ
Trigger: CTGCCCACAGTCCATTGTTCAAAGGAAACCATATAC...TGTCCTTAGTGCTTGGCACAGTATGTAGAATTCACCATTTGTCAATTGATTATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR TCA 90 bp CATAATCAATTGACAAATGGTGAATTCTACATACTGTGCCAAGCACTAAGGACAAGGGTGCTTAATTCCTaGTTGATGAGACTCTGGAGA +
Preference number: 4 (lower is better)
Translates to: HNQLTNGEFYILCQALRTRVLNS*LMRLWR
Trigger: TCTCCAGAGTCTCATCAATCAGGAATTAAGCACCCT...TGTCCTTAGTGCTTGGCACAGTATGTAGAATTCACCATTTGTCAATTGATTATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR TCA 90 bp GTTTTTCAAGCTCCAAAGCCTGATCTTTTCCAAAGTACACTATATTGTGTCTCATTTAAAAGGCTCATGTaGTTAGGTCAGACCCACTCG +
Preference number: 4 (lower is better)
Translates to: VFQAPKPDLFQSTLYCVSFKRLM*LGQTHS
Trigger: CGAGTGGGTCTGACCTAATCACATGAGCCTTTTAAA...TGAGACACAATATAGTGTACTTTGGAAAAGATCAGGCTTTGGAGCTTGAAAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR TCA 90 bp CATAATCAATTGACAAATGGTGAATTCTACATACTGTGCCAAGCACTAAGGACAAGATTCTCACATGGCTaGAATCAAGGTATGGGTGTG +
Preference number: 4 (lower is better)
Translates to: HNQLTNGEFYILCQALRTRFSHG*NQGMGV
Trigger: CACACCCATACCTTGATTTCAGCCATGTGAGAATCT...TGTCCTTAGTGCTTGGCACAGTATGTAGAATTCACCATTTGTCAATTGATTATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR GCA 90 bp TGGTATACAGCAGAGTCCCATCATCCTGAATTCGAAGCAACTTATTTGGCATTGTTGTATATGCATAGCTaGCAAATTTCAGAGGACATG +
Preference number: 4 (lower is better)
Translates to: WYTAESHHPEFEATYLALLYMHS*QISEDM
Trigger: CATGTCCTCTGAAATTTGGCAGCTATGCATATACAA...CAATGCCAAATAAGTTGCTTCGAATTCAGGATGATGGGACTCTGCTGTATACCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514193.5
ENST00000630416.2
CDS-3UTR GCA 90 bp TGGGTCTCAATTCAAGGACTGACCCCTAATACAGGTTCTCTGTTTAAATATGTATCCAAACACAGTTCTTaGAGGCACAGATTCTCTGTT +
Preference number: 4 (lower is better)
Translates to: WVSIQGLTPNTGSLFKYVSKHSS*RHRFSV
Trigger: AACAGAGAATCTGTGCCTGCAAGAACTGTGTTTGGA...TACATATTTAAACAGAGAACCTGTATTAGGGGTCAGTCCTTGAATTGAGACCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510233.5
ENST00000630416.2
CDS-3UTR GCA 90 bp TGGTATACAGCAGAGTCCCATCATCCTGAATTCGAAGCAACTTATTTGGCATTGGTTGAAAGTTTTCTTTaGTTCAGCTGGCTTGTTTTC +
Preference number: 4 (lower is better)
Translates to: WYTAESHHPEFEATYLALVESFL*FSWLVF
Trigger: GAAAACAAGCCAGCTGAAGCAAAGAAAACTTTCAAC...CAATGCCAAATAAGTTGCTTCGAATTCAGGATGATGGGACTCTGCTGTATACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000513005.5
ENST00000630416.2
CDS-3UTR GCA 90 bp TCAACCCTTACCAAAACCTCTTCTGGTATACAAAGCTGTTGTAAATTTGAGTCATGTTTTCGCATGGAGTaGTTTCTGTCTGCAGTTCCA +
Preference number: 4 (lower is better)
Translates to: STLTKTSSGIQSCCKFESCFRME*FLSAVP
Trigger: TGGAACTGCAGACAGAAAGCACTCCATGCGAAAACA...TGACTCAAATTTACAACAGCTTTGTATACCAGAAGAGGTTTTGGTAAGGGTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
CDS-3UTR GCA 90 bp ACCCTTACCAAAACCTCTTCTGGTATACAAAGCTGTTGTAAATTTGAGTCAGCGGTGTTTTCTTCCTTTTaGCCTGATCTTGACGAGATA +
Preference number: 4 (lower is better)
Translates to: TLTKTSSGIQSCCKFESAVFSSF*PDLDEI
Trigger: TATCTCGTCAAGATCAGGGCAAAAGGAAGAAAACAC...CGCTGACTCAAATTTACAACAGCTTTGTATACCAGAAGAGGTTTTGGTAAGGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381620.9
CDS-3UTR GCA 90 bp AGTTTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCACGTGTTTTCTTCCTTTTaGCCTGATCTTGACGAGATA +
Preference number: 4 (lower is better)
Translates to: SFSYVYQASNYISRDSEHVFSSF*PDLDEI
Trigger: TATCTCGTCAAGATCAGGGCAAAAGGAAGAAAACAC...GTGCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAAACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000381620.9
ENST00000540012.5
CDS-3UTR GCA 90 bp CTAGTTTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCCTGAAAAATCTGAACTaGCAGAATGTCATTGCACTC +
Preference number: 4 (lower is better)
Translates to: LVFLMCTKLPITLAGTLSLKNLN*QNVIAL
Trigger: GAGTGCAATGACATTCTGGCAGTTCAGATTTTTCAG...GCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAAACTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000381620.9
CDS-3UTR GCA 90 bp CATAATCAATTGACAAATGGTGAATTCTACATACTGTGCCAAGCACTAAGGACAGCTATTACAGTGAACTaGGGTCCTCACGTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: HNQLTNGEFYILCQALRTAITVN*GPHVFF
Trigger: AAAGAAGACGTGAGGACCGCAGTTCACTGTAATAGC...TGTCCTTAGTGCTTGGCACAGTATGTAGAATTCACCATTTGTCAATTGATTATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR GCA 90 bp ACAAAGGGAAATGAAGCAGTTGTAACTCAATGCATCTGGAAAGAGGGTTCTTGCAGTGTTTGGACCATGTaGATCAGAATCAAGAACATT +
Preference number: 4 (lower is better)
Translates to: TKGNEAVVTQCIWKEGSCSVWTM*IRIKNI
Trigger: AATGTTCTTGATTCTGATGCACATGGTCCAAACACT...GCAAGAACCCTCTTTCCAGATGCATTGAGTTACAACTGCTTCATTTCCCTTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR GCA 90 bp GTTTTTCAAGCTCCAAAGCCTGATCTTTTCCAAAGTACACTATATTGTGTCTCAAGGGTTGCACTTCCCTaGCACCTTGAAGTTAAACAT +
Preference number: 4 (lower is better)
Translates to: VFQAPKPDLFQSTLYCVSRVALP*HLEVKH
Trigger: ATGTTTAACTTCAAGGTGGCAGGGAAGTGCAACCCT...TGAGACACAATATAGTGTACTTTGGAAAAGATCAGGCTTTGGAGCTTGAAAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR GCA 90 bp GTTTTTCAAGCTCCAAAGCCTGATCTTTTCCAAAGTACACTATATTGTGTCTCACTATGGAAGATGACTTaGACCCTGAGAAATGGGTTC +
Preference number: 4 (lower is better)
Translates to: VFQAPKPDLFQSTLYCVSLWKMT*TLRNGF
Trigger: GAACCCATTTCTCAGGGTGCAAGTCATCTTCCATAG...TGAGACACAATATAGTGTACTTTGGAAAAGATCAGGCTTTGGAGCTTGAAAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR GCA 90 bp CATAATCAATTGACAAATGGTGAATTCTACATACTGTGCCAAGCACTAAGGACACTTCAACTGGAACTATaGCTTCACAGCACAAATGGC +
Preference number: 4 (lower is better)
Translates to: HNQLTNGEFYILCQALRTLQLEL*LHSTNG
Trigger: GCCATTTGTGCTGTGAAGGCATAGTTCCAGTTGAAG...TGTCCTTAGTGCTTGGCACAGTATGTAGAATTCACCATTTGTCAATTGATTATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR GCA 90 bp ACAAAGGGAAATGAAGCAGTTGTAACTCAATGCATCTGGAAAGAGGGTTCTTGCCACATGGTAAGAACATaGTCAAACCAGAATACAAAC +
Preference number: 4 (lower is better)
Translates to: TKGNEAVVTQCIWKEGSCHMVRT*SNQNTN
Trigger: GTTTGTATTCTGGTTTGAGCATGTTCTTACCATGTG...GCAAGAACCCTCTTTCCAGATGCATTGAGTTACAACTGCTTCATTTCCCTTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR GCA 90 bp CTGATCTTTTCCAAAGTACACTATATTGTGTCTCATAAGATGTACATGGGTCAAGATTCCCATTTTCCCTaGTGGCTGTCAAGTCTCATC +
Preference number: 4 (lower is better)
Translates to: LIFSKVHYIVSHKMYMGQDSHFP*WLSSLI
Trigger: GATGAGACTTGACAGCCAGCAGGGAAAATGGGAATC...TTGACCCATGTACATCTTATGAGACACAATATAGTGTACTTTGGAAAAGATCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR GCA 90 bp ACCCTTACCAAAACCTCTTCTGGTATACAAAGCTGTTGTAAATTTGAGTCAGCGATCACCGCCGCTTTTTaGAATTACTCTACATTACAG +
Preference number: 4 (lower is better)
Translates to: TLTKTSSGIQSCCKFESAITAAF*NYSTLQ
Trigger: CTGTAATGTAGAGTAATTGCAAAAAGCGGCGGTGAT...CGCTGACTCAAATTTACAACAGCTTTGTATACCAGAAGAGGTTTTGGTAAGGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514090.5
CDS-3UTR CCA 90 bp TTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCACTCATTCGTGTTAAAGCTATaGAGATTACTTCCTGGACTC +
Preference number: 4 (lower is better)
Translates to: FSYVYQASNYISRDSEHSFVLKL*RLLPGL
Trigger: GAGTCCAGGAAGTAATCTCCATAGCTTTAACACGAA...TGAGTGCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356504.5
CDS-3UTR CCA 90 bp GTTTTTCAAGCTCCAAAGCCTGATCTTTTCCAAAGTACACTATATTGTGTCTCATTAGCCTCATCTTCTTaGATGTTAGCCAGCACCAAC +
Preference number: 4 (lower is better)
Translates to: VFQAPKPDLFQSTLYCVSLASSS*MLASTN
Trigger: GTTGGTGCTGGCTAACATCCAAGAAGATGAGGCTAA...TGAGACACAATATAGTGTACTTTGGAAAAGATCAGGCTTTGGAGCTTGAAAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR CCA 90 bp GTTAAAACCATGAACTTAACAGTCAGACAGGTAGATCGGAGTTCAAGTATACTTTTAGCCTCATCTTCTTaGATGTTAGCCAGCACCAAC +
Preference number: 4 (lower is better)
Translates to: VKTMNLTVRQVDRSSSILLASSS*MLASTN
Trigger: GTTGGTGCTGGCTAACATCCAAGAAGATGAGGCTAA...AAGTATACTTGAACTCCGATCTACCTGTCTGACTGTTAAGTTCATGGTTTTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515082.5
CDS-3UTR CCA 90 bp ACTGGTAAGCTATGTCACTATATACATACTGTACATGTTGGATCACAAATTAGCACTGTCTCCCAGTCCTaGTCTAAGCCGATTATCGTA +
Preference number: 4 (lower is better)
Translates to: TGKLCHYIHTVHVGSQISTVSQS*SKPIIV
Trigger: TACGATAATCGGCTTAGACCAGGACTGGGAGACAGT...GCTAATTTGTGATCCAACATGTACAGTATGTATATAGTGACATAGCTTACCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
CDS-3UTR CCA 90 bp TTAATGGAAGTATTAGTACTACAAGAACTCCTAAAGGATTTCAGGCAAGAACACACTGTCTCCCAGTCCTaGTCTAAGCCGATTATCGTA +
Preference number: 4 (lower is better)
Translates to: LMEVLVLQELLKDFRQEHTVSQS*SKPIIV
Trigger: TACGATAATCGGCTTAGACCAGGACTGGGAGACAGT...GTGTTCTTGCCTGAAATCCTTTAGGAGTTCTTGTAGTACTAATACTTCCATTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515082.5
CDS-3UTR CCA 90 bp ATGAATGAGCATCCATTGGGAAATCCTCCAAGTGCATTGGGCATTCAGCTTGAATCGAAGCAACTTATTTaGCATTGTCATATTATGAGC +
Preference number: 4 (lower is better)
Translates to: MNEHPLGNPPSALGIQLESKQLI*HCHIMS
Trigger: GCTCATAATATGACAATGCCAAATAAGTTGCTTCGA...TTCAAGCTGAATGCCCAATGCACTTGGAGGATTTCCCAATGGATGCTCATTCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000513005.5
ENST00000514193.5
ENST00000630416.2
CDS-3UTR CCA 90 bp ACTGGTAAGCTATGTCACTATATACATACTGTACATGTTGGATCACAAATTAGCGATTCGGGGCATAATTaGCAACAGCCACTGCATAAG +
Preference number: 4 (lower is better)
Translates to: TGKLCHYIHTVHVGSQISDSGHN*QQPLHK
Trigger: CTTATGCAGTGGCTGTTGCCAATTATGCCCCGAATC...GCTAATTTGTGATCCAACATGTACAGTATGTATATAGTGACATAGCTTACCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR CCA 90 bp CAAATGCATGTCTCCATTAAAGGTCTACTGGTAAGCTATGTCACTATATACATAGATTCGGGGCATAATTaGCAACAGCCACTGCATAAG +
Preference number: 4 (lower is better)
Translates to: QMHVSIKGLLVSYVTIYIDSGHN*QQPLHK
Trigger: CTTATGCAGTGGCTGTTGCCAATTATGCCCCGAATC...TATGTATATAGTGACATAGCTTACCAGTAGACCTTTAATGGAGACATGCATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR CCA 90 bp TTTCTTGGAATAAACTGGGCCATGAGAAAGCTATATACTTGGACCATATTAGCTCACTCTTGGAGATGGTaGAGAGAACTGGATCTTTTG +
Preference number: 4 (lower is better)
Translates to: FLGINWAMRKLYTWTILAHSWRW*RELDLL
Trigger: CAAAAGATCCAGTTCTCTCCACCATCTCCAAGAGTG...AGCTAATATGGTCCAAGTATATAGCTTTCTCATGGCCCAGTTTATTCCAAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630416.2
CDS-3UTR CCA 90 bp TCCCATCATCCTGAATTCGAAGCAACTTATTTGGCATTGTCATATTATGAGCTATTGCACTCTTGGAGATaGTGGAGAGAACTGGATCTT +
Preference number: 4 (lower is better)
Translates to: SHHPEFEATYLALSYYELLHSWR*WRELDL
Trigger: AAGATCCAGTTCTCTCCACCATCTCCAAGAGTGCAA...TAGCTCATAATATGACAATGCCAAATAAGTTGCTTCGAATTCAGGATGATGGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513005.5
ENST00000630416.2
CDS-3UTR CCA 90 bp ACTGGTAAGCTATGTCACTATATACATACTGTACATGTTGGATCACAAATTAGCAGCTGGCTTGTTTTCTaGCTTCTTGTTGGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: TGKLCHYIHTVHVGSQISSWLVF*LLVGFW
Trigger: CCAGAACCCAACAAGAAGCCAGAAAACAAGCCAGCT...GCTAATTTGTGATCCAACATGTACAGTATGTATATAGTGACATAGCTTACCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR CCA 90 bp AATTCTCATCAGTGGGAGTTTTTGGCACAATTTTCTAATCCAATATGCATGTTGAGCTGGCTTGTTTTCTaGCTTCTTGTTGGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: NSHQWEFLAQFSNPICMLSWLVF*LLVGFW
Trigger: CCAGAACCCAACAAGAAGCCAGAAAACAAGCCAGCT...CAACATGCATATTGGATTAGAAAATTGTGCCAAAAACTCCCACTGATGAGAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
CDS-3UTR CCA 90 bp CAAATGCATGTCTCCATTAAAGGTCTACTGGTAAGCTATGTCACTATATACATAAGCTGGCTTGTTTTCTaGCTTCTTGTTGGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: QMHVSIKGLLVSYVTIYISWLVF*LLVGFW
Trigger: CCAGAACCCAACAAGAAGCCAGAAAACAAGCCAGCT...TATGTATATAGTGACATAGCTTACCAGTAGACCTTTAATGGAGACATGCATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR CCA 90 bp TTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCACTCAATCCCAAAGATAACATaGGTCTCAATTCAAGGACTG +
Preference number: 4 (lower is better)
Translates to: FSYVYQASNYISRDSEHSIPKIT*VSIQGL
Trigger: CAGTCCTTGAATTGAGACCCATGTTATCTTTGGGAT...TGAGTGCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR CCA 90 bp CTCATCAGTGGGAGTTTTTGGCACAATTTTCTAATCCAATATGCATGTTGCTCCATCCCAAAGATAACATaGGTCTCAATTCAAGGACTG +
Preference number: 4 (lower is better)
Translates to: LISGSFWHNFLIQYACCSIPKIT*VSIQGL
Trigger: CAGTCCTTGAATTGAGACCCATGTTATCTTTGGGAT...GGAGCAACATGCATATTGGATTAGAAAATTGTGCCAAAAACTCCCACTGATGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
CDS-3UTR CCA 90 bp AGTTTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCACATCCCAAAGATAACATaGGTCTCAATTCAAGGACTG +
Preference number: 4 (lower is better)
Translates to: SFSYVYQASNYISRDSEHIPKIT*VSIQGL
Trigger: CAGTCCTTGAATTGAGACCCATGTTATCTTTGGGAT...GTGCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAAACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR CCA 90 bp CTAGTTTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCATCCCAAAGATAACATaGGTCTCAATTCAAGGACTG +
Preference number: 4 (lower is better)
Translates to: LVFLMCTKLPITLAGTLSIPKIT*VSIQGL
Trigger: CAGTCCTTGAATTGAGACCCATGTTATCTTTGGGAT...GCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAAACTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR CCA 90 bp CAAATGCATGTCTCCATTAAAGGTCTACTGGTAAGCTATGTCACTATATACATAATGGCTGTTTTCGCATaGAGTGCTTTCTGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: QMHVSIKGLLVSYVTIYIMAVFA*SAFCLQ
Trigger: CTGCAGACAGAAAGCACTCCATGCGAAAACAGCCAT...TATGTATATAGTGACATAGCTTACCAGTAGACCTTTAATGGAGACATGCATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR CCA 90 bp ACTGGTAAGCTATGTCACTATATACATACTGTACATGTTGGATCACAAATTAGCCCACAGCAACCAAACTaGATGCTTTTTCCAGTCTCC +
Preference number: 4 (lower is better)
Translates to: TGKLCHYIHTVHVGSQISPQQPN*MLFPVS
Trigger: GGAGACTGGAAAAAGCATCCAGTTTGGTTGCTGTGG...GCTAATTTGTGATCCAACATGTACAGTATGTATATAGTGACATAGCTTACCAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
CDS-3UTR CCA 90 bp CTCATCAGTGGGAGTTTTTGGCACAATTTTCTAATCCAATATGCATGTTGCTCCTCATTGCTTGCCTTCTaGCATTGTGTACTTCCTTAT +
Preference number: 4 (lower is better)
Translates to: LISGSFWHNFLIQYACCSSLLAF*HCVLPY
Trigger: ATAAGGAAGTACACAATGCCAGAAGGCAAGCAATGA...GGAGCAACATGCATATTGGATTAGAAAATTGTGCCAAAAACTCCCACTGATGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381620.9
CDS-3UTR CCA 90 bp GCTACTGAATTTAAGGTTCAGCAGACCAATTTAACCCATCTATCAATCAACATTGGAAACTCCCAGTCCTaGTCTAAGCCGATTATCGTA +
Preference number: 4 (lower is better)
Translates to: ATEFKVQQTNLTHLSINIGNSQS*SKPIIV
Trigger: TACGATAATCGGCTTAGACCAGGACTGGGAGTTTCC...AATGTTGATTGATAGATGGGTTAAATTGGTCTGCTGAACCTTAAATTCAGTAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR CCA 90 bp GTTTTTCAAGCTCCAAAGCCTGATCTTTTCCAAAGTACACTATATTGTGTCTCAGCTCAGATTCTCACATaGCTGAAATCAAGGTATGGG +
Preference number: 4 (lower is better)
Translates to: VFQAPKPDLFQSTLYCVSAQILT*LKSRYG
Trigger: CCCATACCTTGATTTCAGCCATGTGAGAATCTGAGC...TGAGACACAATATAGTGTACTTTGGAAAAGATCAGGCTTTGGAGCTTGAAAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507460.1
3UTR CAA 72 bp TGGAAGATGACTTGCACCCTGAGAAATGGGTTCTACTaGCCAAGTGTGGTAGTTATTAAGTTACTTGCAAAA +
Preference number: 4 (lower is better)
Translates to: WKMTCTLRNGFY*PSVVVIKLLAK
Trigger: TTTTGCAAGTAACTTAATAACTACCACACTTGGCAAGTAGAACCCATTTCTCAGGGTGCAAGTCATCTTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR TCA 90 bp GAACTGCTTTCACAAGAGAAAAATGTGCCAATTAACTGCCCTTTCCTTTATAATATTGGGCATTCAGCTTaGACTGTAAGCCTCATGGTA +
Preference number: 4 (lower is better)
Translates to: ELLSQEKNVPINCPFLYNIGHSA*TVSLMV
Trigger: TACCATGAGGCTTACAGTTCAAGCTGAATGCCCAAT...ATTATAAAGGAAAGGGCAGTTAATTGGCACATTTTTCTCTTGTGAAAGCAGTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
CDS-3UTR TCA 90 bp ACTGGTAAGCTATGTCACTATATACATACTGTACATGTTGGATCACAAATTAGCTTCAGAGGACATGAATaGGCATCCATTGGGAAATCC +
Preference number: 4 (lower is better)
Translates to: TGKLCHYIHTVHVGSQISFRGHE*ASIGKS
Trigger: GGATTTCCCAATGGATGCTCATTCATGTCCTCTGAA...GCTAATTTGTGATCCAACATGTACAGTATGTATATAGTGACATAGCTTACCAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR TCA 90 bp TTAATGGAAGTATTAGTACTACAAGAACTCCTAAAGGATTTCAGGCAAGAACACTTCAGAGGACATGAATaGGCATCCATTGGGAAATCC +
Preference number: 4 (lower is better)
Translates to: LMEVLVLQELLKDFRQEHFRGHE*ASIGKS
Trigger: GGATTTCCCAATGGATGCTCATTCATGTCCTCTGAA...GTGTTCTTGCCTGAAATCCTTTAGGAGTTCTTGTAGTACTAATACTTCCATTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515082.5
CDS-3UTR TCA 90 bp CAAATGCATGTCTCCATTAAAGGTCTACTGGTAAGCTATGTCACTATATACATATTCAGAGGACATGAATaGGCATCCATTGGGAAATCC +
Preference number: 4 (lower is better)
Translates to: QMHVSIKGLLVSYVTIYIFRGHE*ASIGKS
Trigger: GGATTTCCCAATGGATGCTCATTCATGTCCTCTGAA...TATGTATATAGTGACATAGCTTACCAGTAGACCTTTAATGGAGACATGCATTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR TCA 90 bp ACTGGTAAGCTATGTCACTATATACATACTGTACATGTTGGATCACAAATTAGCCCCAGCAGGTCATATTaGTTTAACCTAGAGCCATCA +
Preference number: 4 (lower is better)
Translates to: TGKLCHYIHTVHVGSQISPSRSY*FNLEPS
Trigger: TGATGGCTCTAGGTTAAATCAATATGACCTGCTGGG...GCTAATTTGTGATCCAACATGTACAGTATGTATATAGTGACATAGCTTACCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR TCA 90 bp AAACAATACTCCCCGCCCCACCTACTACAAATAATTAGTTTGAGGATCAAGAGACTTTTCAGGTGGAAATaGGCTGTCATTACAGTATAT +
Preference number: 4 (lower is better)
Translates to: KQYSPPHLLQIISLRIKRLFRWK*AVITVY
Trigger: ATATACTGTAATGACAGCTCATTTCCACCTGAAAAG...TCTCTTGATCCTCAAACTAATTATTTGTAGTAGGTGGGGCGGGGAGTATTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000514236.1
CDS-3UTR TCA 90 bp AGTTGTGTAAGCTTGGGCAAGAAAATAACTTTACTGCTTCAGATTCTTCATGAGTCTGTTAAGCCAGAATaGAACTTGGGAGAGAATGAC +
Preference number: 4 (lower is better)
Translates to: SCVSLGKKITLLLQILHESVKPE*NLGEND
Trigger: GTCATTCTCTCCCAAGTTTCATTCTGGCTTAACAGA...CTCATGAAGAATCTGAAGCAGTAAAGTTATTTTCTTGCCCAAGCTTACACAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515082.5
CDS-3UTR TCA 90 bp ACTGGTAAGCTATGTCACTATATACATACTGTACATGTTGGATCACAAATTAGCGAGAATTCCGAGCACTaGTGCTTAGAGTTGTCATTG +
Preference number: 4 (lower is better)
Translates to: TGKLCHYIHTVHVGSQISENSEH*CLELSL
Trigger: CAATGACAACTCTAAGCATCAGTGCTCGGAATTCTC...GCTAATTTGTGATCCAACATGTACAGTATGTATATAGTGACATAGCTTACCAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR TCA 90 bp ACTGGTAAGCTATGTCACTATATACATACTGTACATGTTGGATCACAAATTAGCTCTCAATTCAAGGACTaGCCCCTAATACAGGTTCTC +
Preference number: 4 (lower is better)
Translates to: TGKLCHYIHTVHVGSQISSQFKD*PLIQVL
Trigger: GAGAACCTGTATTAGGGGTCAGTCCTTGAATTGAGA...GCTAATTTGTGATCCAACATGTACAGTATGTATATAGTGACATAGCTTACCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR TCA 90 bp CAAATGCATGTCTCCATTAAAGGTCTACTGGTAAGCTATGTCACTATATACATATCTCAATTCAAGGACTaGCCCCTAATACAGGTTCTC +
Preference number: 4 (lower is better)
Translates to: QMHVSIKGLLVSYVTIYISQFKD*PLIQVL
Trigger: GAGAACCTGTATTAGGGGTCAGTCCTTGAATTGAGA...TATGTATATAGTGACATAGCTTACCAGTAGACCTTTAATGGAGACATGCATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR TCA 90 bp AATTCTCATCAGTGGGAGTTTTTGGCACAATTTTCTAATCCAATATGCATGTTGCTGTCTGCAGTTCCATaGGTTAGCAAATGCATGTCT +
Preference number: 4 (lower is better)
Translates to: NSHQWEFLAQFSNPICMLLSAVP*VSKCMS
Trigger: AGACATGCATTTGCTAACTCATGGAACTGCAGACAG...CAACATGCATATTGGATTAGAAAATTGTGCCAAAAACTCCCACTGATGAGAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
CDS-3UTR TCA 90 bp CAAATGCATGTCTCCATTAAAGGTCTACTGGTAAGCTATGTCACTATATACATACTGTCTGCAGTTCCATaGGTTAGCAAATGCATGTCT +
Preference number: 4 (lower is better)
Translates to: QMHVSIKGLLVSYVTIYILSAVP*VSKCMS
Trigger: AGACATGCATTTGCTAACTCATGGAACTGCAGACAG...TATGTATATAGTGACATAGCTTACCAGTAGACCTTTAATGGAGACATGCATTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR TCA 90 bp TTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCACTCAATAATTAGTGGCTTCTaGGTCTTGAAAAGAAGCCTT +
Preference number: 4 (lower is better)
Translates to: FSYVYQASNYISRDSEHSIISGF*VLKRSL
Trigger: AAGGCTTCTTTTCAAGACTCAGAAGCCACTAATTAT...TGAGTGCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
CDS-3UTR TCA 90 bp ACCCTTACCAAAACCTCTTCTGGTATACAAAGCTGTTGTAAATTTGAGTCAGCGTCCACAATCTATTGGTaGTGTTTTAAAGTTGCAGTG +
Preference number: 4 (lower is better)
Translates to: TLTKTSSGIQSCCKFESASTIYW*CFKVAV
Trigger: CACTGCAACTTTAAAACATCACCAATAGATTGTGGA...CGCTGACTCAAATTTACAACAGCTTTGTATACCAGAAGAGGTTTTGGTAAGGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
CDS-3UTR TCA 90 bp CATAATCAATTGACAAATGGTGAATTCTACATACTGTGCCAAGCACTAAGGACAAACCTTGAAAACAGATaGCTCAGTCCAGTGTTTGGA +
Preference number: 4 (lower is better)
Translates to: HNQLTNGEFYILCQALRTNLENR*LSPVFG
Trigger: TCCAAACACTGGACTGAGTCATCTGTTTTCAAGGTT...TGTCCTTAGTGCTTGGCACAGTATGTAGAATTCACCATTTGTCAATTGATTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR TCA 90 bp CATAATCAATTGACAAATGGTGAATTCTACATACTGTGCCAAGCACTAAGGACAATCCGAAACCCTAAGTaGGGAAGACATAAAAGAGAG +
Preference number: 4 (lower is better)
Translates to: HNQLTNGEFYILCQALRTIRNPK*GRHKRE
Trigger: CTCTCTTTTATGTCTTCCTCACTTAGGGTTTCGGAT...TGTCCTTAGTGCTTGGCACAGTATGTAGAATTCACCATTTGTCAATTGATTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR TCA 90 bp CATAATCAATTGACAAATGGTGAATTCTACATACTGTGCCAAGCACTAAGGACAAACAGCAGGGGCTACTaGATTAGTCCATTTCACTAT +
Preference number: 4 (lower is better)
Translates to: HNQLTNGEFYILCQALRTNSRGY*ISPFHY
Trigger: ATAGTGAAATGGACTAATTCAGTAGCCCCTGCTGTT...TGTCCTTAGTGCTTGGCACAGTATGTAGAATTCACCATTTGTCAATTGATTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR GCA 90 bp CTAGTTTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCCAGCAAACACTGTTTTaGGCACACGTAATAATAACA +
Preference number: 4 (lower is better)
Translates to: LVFLMCTKLPITLAGTLSQQTLF*AHVIIT
Trigger: TGTTATTATTACGTGTGCGCAAAACAGTGTTTGCTG...GCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAAACTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356504.5
CDS-3UTR GCA 90 bp ACCCTTACCAAAACCTCTTCTGGTATACAAAGCTGTTGTAAATTTGAGTCAGCGTTGTATATGCATAGCTaGCAAATTTCAGAGGACATG +
Preference number: 4 (lower is better)
Translates to: TLTKTSSGIQSCCKFESALYMHS*QISEDM
Trigger: CATGTCCTCTGAAATTTGGCAGCTATGCATATACAA...CGCTGACTCAAATTTACAACAGCTTTGTATACCAGAAGAGGTTTTGGTAAGGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
CDS-3UTR GCA 90 bp TTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCACTCATTGTATATGCATAGCTaGCAAATTTCAGAGGACATG +
Preference number: 4 (lower is better)
Translates to: FSYVYQASNYISRDSEHSLYMHS*QISEDM
Trigger: CATGTCCTCTGAAATTTGGCAGCTATGCATATACAA...TGAGTGCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR GCA 90 bp TCAACCCTTACCAAAACCTCTTCTGGTATACAAAGCTGTTGTAAATTTGAGTCATCCAAACACAGTTCTTaGAGGCACAGATTCTCTGTT +
Preference number: 4 (lower is better)
Translates to: STLTKTSSGIQSCCKFESSKHSS*RHRFSV
Trigger: AACAGAGAATCTGTGCCTGCAAGAACTGTGTTTGGA...TGACTCAAATTTACAACAGCTTTGTATACCAGAAGAGGTTTTGGTAAGGGTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
CDS-3UTR GCA 90 bp TGTTCAACCCTTACCAAAACCTCTTCTGGTATACAAAGCTGTTGTAAATTTGAGTCCAAACACAGTTCTTaGAGGCACAGATTCTCTGTT +
Preference number: 4 (lower is better)
Translates to: CSTLTKTSSGIQSCCKFESKHSS*RHRFSV
Trigger: AACAGAGAATCTGTGCCTGCAAGAACTGTGTTTGGA...CTCAAATTTACAACAGCTTTGTATACCAGAAGAGGTTTTGGTAAGGGTTGAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
CDS-3UTR GCA 90 bp TGTTCAACCCTTACCAAAACCTCTTCTGGTATACAAAGCTGTTGTAAATTTGAGATTGGCAACAGCCACTaGATAAGCGTTGTTCTGTAT +
Preference number: 4 (lower is better)
Translates to: CSTLTKTSSGIQSCCKFEIGNSH*ISVVLY
Trigger: ATACAGAACAACGCTTATGCAGTGGCTGTTGCCAAT...CTCAAATTTACAACAGCTTTGTATACCAGAAGAGGTTTTGGTAAGGGTTGAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
CDS-3UTR GCA 90 bp CTCATCAGTGGGAGTTTTTGGCACAATTTTCTAATCCAATATGCATGTTGCTCCGTTGAAAGTTTTCTTTaGTTCAGCTGGCTTGTTTTC +
Preference number: 4 (lower is better)
Translates to: LISGSFWHNFLIQYACCSVESFL*FSWLVF
Trigger: GAAAACAAGCCAGCTGAAGCAAAGAAAACTTTCAAC...GGAGCAACATGCATATTGGATTAGAAAATTGTGCCAAAAACTCCCACTGATGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
CDS-3UTR GCA 90 bp AGTTTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCACGTTGAAAGTTTTCTTTaGTTCAGCTGGCTTGTTTTC +
Preference number: 4 (lower is better)
Translates to: SFSYVYQASNYISRDSEHVESFL*FSWLVF
Trigger: GAAAACAAGCCAGCTGAAGCAAAGAAAACTTTCAAC...GTGCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAAACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR GCA 90 bp ACTGGTAAGCTATGTCACTATATACATACTGTACATGTTGGATCACAAATTAGCAGCAACCAAACTGGATaGTTTTTCCAGTCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: TGKLCHYIHTVHVGSQISSNQTG*FFQSPA
Trigger: TGCTGGAGACTGGAAAAAGCATCCAGTTTGGTTGCT...GCTAATTTGTGATCCAACATGTACAGTATGTATATAGTGACATAGCTTACCAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
CDS-3UTR GCA 90 bp CTCATCAGTGGGAGTTTTTGGCACAATTTTCTAATCCAATATGCATGTTGCTCCAGAAAAGTACTTTGGTaGTCTTCTGGAATCCATGAT +
Preference number: 4 (lower is better)
Translates to: LISGSFWHNFLIQYACCSRKVLW*SSGIHD
Trigger: ATCATGGATTCCAGAAGAGCACCAAAGTACTTTTCT...GGAGCAACATGCATATTGGATTAGAAAATTGTGCCAAAAACTCCCACTGATGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381620.9
CDS-3UTR GCA 90 bp AGTTTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCACCACAAAAACGGGTATTaGTTACTGTACAGTACAGTT +
Preference number: 4 (lower is better)
Translates to: SFSYVYQASNYISRDSEHHKNGY*LLYSTV
Trigger: AACTGTACTGTACAGTAAGCAATACCCGTTTTTGTG...GTGCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAAACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000381620.9
CDS-3UTR GCA 90 bp CATAATCAATTGACAAATGGTGAATTCTACATACTGTGCCAAGCACTAAGGACATTTAGGGCCAGAGGCTaGAAACTAATACTCAAGTGT +
Preference number: 4 (lower is better)
Translates to: HNQLTNGEFYILCQALRTFRARG*KLILKC
Trigger: ACACTTGAGTATTAGTTTGCAGCCTCTGGCCCTAAA...TGTCCTTAGTGCTTGGCACAGTATGTAGAATTCACCATTTGTCAATTGATTATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR GCA 90 bp GTTTTTCAAGCTCCAAAGCCTGATCTTTTCCAAAGTACACTATATTGTGTCTCAAAGGGCATACAGCACTaGCTTCTAACACCAAGAAAA +
Preference number: 4 (lower is better)
Translates to: VFQAPKPDLFQSTLYCVSKGIQH*LLTPRK
Trigger: TTTTCTTGGTGTTAGAAGGCAGTGCTGTATGCCCTT...TGAGACACAATATAGTGTACTTTGGAAAAGATCAGGCTTTGGAGCTTGAAAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR GCA 90 bp AGTTGTGTAAGCTTGGGCAAGAAAATAACTTTACTGCTTCAGATTCTTCATGAGAAACACTTAGCACAGTaGCTGACACATACAGCTCAA +
Preference number: 4 (lower is better)
Translates to: SCVSLGKKITLLLQILHEKHLAQ*LTHTAQ
Trigger: TTGAGCTGTATGTGTCAGGCACTGTGCTAAGTGTTT...CTCATGAAGAATCTGAAGCAGTAAAGTTATTTTCTTGCCCAAGCTTACACAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515082.5
CDS-3UTR GCA 90 bp TCCCCGCCCCACCTACTACAAATAATTAGTTTGAGGATCAAGAGAGATAATGTTCATAATGTGCTGTACTaGAAAGTGTGTATTCACTCA +
Preference number: 4 (lower is better)
Translates to: SPPHLLQIISLRIKRDNVHNVLY*KVCIHS
Trigger: TGAGTGAATACACACTTTGCAGTACAGCACATTATG...AACATTATCTCTCTTGATCCTCAAACTAATTATTTGTAGTAGGTGGGGCGGGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514236.1
CDS-3UTR CCA 90 bp TTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCACTCAGTAATAATAACACCCTaGACTTTAAACTGGCATAGC +
Preference number: 4 (lower is better)
Translates to: FSYVYQASNYISRDSEHSVIITP*TLNWHS
Trigger: GCTATGCCAGTTTAAAGTCCAGGGTGTTATTATTAC...TGAGTGCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356504.5
CDS-3UTR CCA 90 bp CAAATGCATGTCTCCATTAAAGGTCTACTGGTAAGCTATGTCACTATATACATATTAGCCTCATCTTCTTaGATGTTAGCCAGCACCAAC +
Preference number: 4 (lower is better)
Translates to: QMHVSIKGLLVSYVTIYILASSS*MLASTN
Trigger: GTTGGTGCTGGCTAACATCCAAGAAGATGAGGCTAA...TATGTATATAGTGACATAGCTTACCAGTAGACCTTTAATGGAGACATGCATTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR CCA 90 bp CAAATGCATGTCTCCATTAAAGGTCTACTGGTAAGCTATGTCACTATATACATAATCCTCCAAGTGCATTaGGCATTCAGCTTGAACTGT +
Preference number: 4 (lower is better)
Translates to: QMHVSIKGLLVSYVTIYIILQVH*AFSLNC
Trigger: ACAGTTCAAGCTGAATGCCCAATGCACTTGGAGGAT...TATGTATATAGTGACATAGCTTACCAGTAGACCTTTAATGGAGACATGCATTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR CCA 90 bp AATTCTCATCAGTGGGAGTTTTTGGCACAATTTTCTAATCCAATATGCATGTTGATCCTCCAAGTGCATTaGGCATTCAGCTTGAACTGT +
Preference number: 4 (lower is better)
Translates to: NSHQWEFLAQFSNPICMLILQVH*AFSLNC
Trigger: ACAGTTCAAGCTGAATGCCCAATGCACTTGGAGGAT...CAACATGCATATTGGATTAGAAAATTGTGCCAAAAACTCCCACTGATGAGAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
CDS-3UTR CCA 90 bp ACTGGTAAGCTATGTCACTATATACATACTGTACATGTTGGATCACAAATTAGCATCCTCCAAGTGCATTaGGCATTCAGCTTGAACTGT +
Preference number: 4 (lower is better)
Translates to: TGKLCHYIHTVHVGSQISILQVH*AFSLNC
Trigger: ACAGTTCAAGCTGAATGCCCAATGCACTTGGAGGAT...GCTAATTTGTGATCCAACATGTACAGTATGTATATAGTGACATAGCTTACCAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR CCA 90 bp AGTGGTTTTAATGGAAGTATTAGTACTACAAGAACTCCTAAAGGATTTCAGGCAATCCTCCAAGTGCATTaGGCATTCAGCTTGAACTGT +
Preference number: 4 (lower is better)
Translates to: SGFNGSISTTRTPKGFQAILQVH*AFSLNC
Trigger: ACAGTTCAAGCTGAATGCCCAATGCACTTGGAGGAT...TGCCTGAAATCCTTTAGGAGTTCTTGTAGTACTAATACTTCCATTAAAACCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515082.5
CDS-3UTR CCA 90 bp GAACTGCTTTCACAAGAGAAAAATGTGCCAATTAACTGCCCTTTCCTTTATAATCACTCTTGGAGATGGTaGAGAGAACTGGATCTTTTG +
Preference number: 4 (lower is better)
Translates to: ELLSQEKNVPINCPFLYNHSWRW*RELDLL
Trigger: CAAAAGATCCAGTTCTCTCCACCATCTCCAAGAGTG...ATTATAAAGGAAAGGGCAGTTAATTGGCACATTTTTCTCTTGTGAAAGCAGTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
CDS-3UTR CCA 90 bp CAAATGCATGTCTCCATTAAAGGTCTACTGGTAAGCTATGTCACTATATACATATTGCACTCTTGGAGATaGTGGAGAGAACTGGATCTT +
Preference number: 4 (lower is better)
Translates to: QMHVSIKGLLVSYVTIYILHSWR*WRELDL
Trigger: AAGATCCAGTTCTCTCCACCATCTCCAAGAGTGCAA...TATGTATATAGTGACATAGCTTACCAGTAGACCTTTAATGGAGACATGCATTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR CCA 90 bp AGTTTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCACCAAAGAAAAGTACTTTaGTGCTCTTCTGGAATCCAT +
Preference number: 4 (lower is better)
Translates to: SFSYVYQASNYISRDSEHQRKVL*CSSGIH
Trigger: ATGGATTCCAGAAGAGCACCAAAGTACTTTTCTTTG...GTGCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAAACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381620.9
CDS-3UTR CCA 90 bp TTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCACTCATCTAAAGTCTTTTCTTaGAATAAACTGGGCCATGAG +
Preference number: 4 (lower is better)
Translates to: FSYVYQASNYISRDSEHSSKVFS*NKLGHE
Trigger: CTCATGGCCCAGTTTATTCCAAGAAAAGACTTTAGA...TGAGTGCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000540012.5
ENST00000630416.2
CDS-3UTR CCA 90 bp GTTTTTCAAGCTCCAAAGCCTGATCTTTTCCAAAGTACACTATATTGTGTCTCACTATGTTACACAGACTaGAGATTCCACTCTGGAAAC +
Preference number: 4 (lower is better)
Translates to: VFQAPKPDLFQSTLYCVSLCYTD*RFHSGN
Trigger: GTTTCCAGAGTGGAATCTCCAGTCTGTGTAACATAG...TGAGACACAATATAGTGTACTTTGGAAAAGATCAGGCTTTGGAGCTTGAAAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR CCA 90 bp CTGATCTTTTCCAAAGTACACTATATTGTGTCTCATAAGATGTACATGGGTCAAACTCAGTCCAGTGTTTaGACCATGTGCATCAGAATC +
Preference number: 4 (lower is better)
Translates to: LIFSKVHYIVSHKMYMGQTQSSV*TMCIRI
Trigger: GATTCTGATGCACATGGTCCAAACACTGGACTGAGT...TTGACCCATGTACATCTTATGAGACACAATATAGTGTACTTTGGAAAAGATCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR CCA 90 bp CTGATCTTTTCCAAAGTACACTATATTGTGTCTCATAAGATGTACATGGGTCAATATTCCTGGGAGCTTTaGAAAAAGGGCATACAGCAC +
Preference number: 4 (lower is better)
Translates to: LIFSKVHYIVSHKMYMGQYSWEL*KKGIQH
Trigger: GTGCTGTATGCCCTTTTTCCAAAGCTCCCAGGAATA...TTGACCCATGTACATCTTATGAGACACAATATAGTGTACTTTGGAAAAGATCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR CCA 90 bp ACAAAGGGAAATGAAGCAGTTGTAACTCAATGCATCTGGAAAGAGGGTTCTTGCATCGTATTCTGTAGATaGCATGTTATCATCTTCATG +
Preference number: 4 (lower is better)
Translates to: TKGNEAVVTQCIWKEGSCIVFCR*HVIIFM
Trigger: CATGAAGATGATAACATGCCATCTACAGAATACGAT...GCAAGAACCCTCTTTCCAGATGCATTGAGTTACAACTGCTTCATTTCCCTTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507460.1
3UTR CAA 72 bp CAGTGTTTGGACCATGTGCATCAGAATCAAGAACATTaGTTGAAATATAGTTCTGGGACCAAACCAAATCTG +
Preference number: 4 (lower is better)
Translates to: QCLDHVHQNQEH*LKYSSGTKPNL
Trigger: CAGATTTGGTTTGGTCCCAGAACTATATTTCAACAAATGTTCTTGATTCTGATGCACATGGTCCAAACACTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR TCA 90 bp CAAATGCATGTCTCCATTAAAGGTCTACTGGTAAGCTATGTCACTATATACATATCTGTTAAGCCAGAATaGAACTTGGGAGAGAATGAC +
Preference number: 4 (lower is better)
Translates to: QMHVSIKGLLVSYVTIYISVKPE*NLGEND
Trigger: GTCATTCTCTCCCAAGTTTCATTCTGGCTTAACAGA...TATGTATATAGTGACATAGCTTACCAGTAGACCTTTAATGGAGACATGCATTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR TCA 90 bp TCAACCCTTACCAAAACCTCTTCTGGTATACAAAGCTGTTGTAAATTTGAGTCAGAGAACTGGATCTTTTaGAAGATTCGGGGCATAATT +
Preference number: 4 (lower is better)
Translates to: STLTKTSSGIQSCCKFESENWIF*KIRGII
Trigger: AATTATGCCCCGAATCTTTCAAAAGATCCAGTTCTC...TGACTCAAATTTACAACAGCTTTGTATACCAGAAGAGGTTTTGGTAAGGGTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
CDS-3UTR TCA 90 bp TGGCAAATTCCGTTAATAAGTTGCATTTGTGACCTTGGTTTTATACAAGCATGCTCAGTGGGTGTGACATaGGTGATTTTAACACCAATT +
Preference number: 4 (lower is better)
Translates to: WQIPLISCICDLGFIQACSVGVT*VILTPI
Trigger: AATTGGTGTTAAAATCACTCATGTCACACCCACTGA...GCATGCTTGTATAAAACCAAGGTCACAAATGCAACTTATTAACGGAATTTGCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381620.9
CDS-3UTR TCA 90 bp CAAATGCATGTCTCCATTAAAGGTCTACTGGTAAGCTATGTCACTATATACATAGGCTCCCTTATTGAATaGATATTCCCCAAAAGGCAT +
Preference number: 4 (lower is better)
Translates to: QMHVSIKGLLVSYVTIYIGSLIE*IFPKRH
Trigger: ATGCCTTTTGGGGAATATTCATTCAATAAGGGAGCC...TATGTATATAGTGACATAGCTTACCAGTAGACCTTTAATGGAGACATGCATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381620.9
CDS-3UTR TCA 90 bp TGGCAAATTCCGTTAATAAGTTGCATTTGTGACCTTGGTTTTATACAAGCATGCTCAATAAAGGTCATATaGTCAACTAGTGGCCTTTCC +
Preference number: 4 (lower is better)
Translates to: WQIPLISCICDLGFIQACSIKVI*STSGLS
Trigger: GGAAAGGCCACTAGTTGATCATATGACCTTTATTGA...GCATGCTTGTATAAAACCAAGGTCACAAATGCAACTTATTAACGGAATTTGCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381620.9
CDS-3UTR TCA 90 bp CATAATCAATTGACAAATGGTGAATTCTACATACTGTGCCAAGCACTAAGGACATACTGTCACGGAGGTTaGAATTTCAGACTAACACTT +
Preference number: 4 (lower is better)
Translates to: HNQLTNGEFYILCQALRTYCHGG*NFRLTL
Trigger: AAGTGTTAGTCTGAAATTTCAACCTCCGTGACAGTA...TGTCCTTAGTGCTTGGCACAGTATGTAGAATTCACCATTTGTCAATTGATTATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR GCA 90 bp ACTGGTAAGCTATGTCACTATATACATACTGTACATGTTGGATCACAAATTAGCTACATTACAGTGAACTaGGGTCCTCACGTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: TGKLCHYIHTVHVGSQISYITVN*GPHVFF
Trigger: AAAGAAGACGTGAGGACCGCAGTTCACTGTAATGTA...GCTAATTTGTGATCCAACATGTACAGTATGTATATAGTGACATAGCTTACCAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356504.5
ENST00000514090.5
CDS-3UTR GCA 90 bp TTAATGGAAGTATTAGTACTACAAGAACTCCTAAAGGATTTCAGGCAAGAACACTCCAAACACAGTTCTTaGAGGCACAGATTCTCTGTT +
Preference number: 4 (lower is better)
Translates to: LMEVLVLQELLKDFRQEHSKHSS*RHRFSV
Trigger: AACAGAGAATCTGTGCCTGCAAGAACTGTGTTTGGA...GTGTTCTTGCCTGAAATCCTTTAGGAGTTCTTGTAGTACTAATACTTCCATTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515082.5
CDS-3UTR GCA 90 bp ACTGGTAAGCTATGTCACTATATACATACTGTACATGTTGGATCACAAATTAGCTCCAAACACAGTTCTTaGAGGCACAGATTCTCTGTT +
Preference number: 4 (lower is better)
Translates to: TGKLCHYIHTVHVGSQISSKHSS*RHRFSV
Trigger: AACAGAGAATCTGTGCCTGCAAGAACTGTGTTTGGA...GCTAATTTGTGATCCAACATGTACAGTATGTATATAGTGACATAGCTTACCAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR GCA 90 bp ACTGGTAAGCTATGTCACTATATACATACTGTACATGTTGGATCACAAATTAGCATTGGCAACAGCCACTaGATAAGCGTTGTTCTGTAT +
Preference number: 4 (lower is better)
Translates to: TGKLCHYIHTVHVGSQISIGNSH*ISVVLY
Trigger: ATACAGAACAACGCTTATGCAGTGGCTGTTGCCAAT...GCTAATTTGTGATCCAACATGTACAGTATGTATATAGTGACATAGCTTACCAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR GCA 90 bp AATTCTCATCAGTGGGAGTTTTTGGCACAATTTTCTAATCCAATATGCATGTTGATTGGCAACAGCCACTaGATAAGCGTTGTTCTGTAT +
Preference number: 4 (lower is better)
Translates to: NSHQWEFLAQFSNPICMLIGNSH*ISVVLY
Trigger: ATACAGAACAACGCTTATGCAGTGGCTGTTGCCAAT...CAACATGCATATTGGATTAGAAAATTGTGCCAAAAACTCCCACTGATGAGAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
CDS-3UTR GCA 90 bp CTCATCAGTGGGAGTTTTTGGCACAATTTTCTAATCCAATATGCATGTTGCTCCTATTTGAGCTTGTCATaGTGTAATATGTACATGGCT +
Preference number: 4 (lower is better)
Translates to: LISGSFWHNFLIQYACCSYLSLS*CNMYMA
Trigger: AGCCATGTACATATTACAGCATGACAAGCTCAAATA...GGAGCAACATGCATATTGGATTAGAAAATTGTGCCAAAAACTCCCACTGATGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
CDS-3UTR GCA 90 bp AGTTTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCACTATTTGAGCTTGTCATaGTGTAATATGTACATGGCT +
Preference number: 4 (lower is better)
Translates to: SFSYVYQASNYISRDSEHYLSLS*CNMYMA
Trigger: AGCCATGTACATATTACAGCATGACAAGCTCAAATA...GTGCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAAACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR GCA 90 bp AATTCTCATCAGTGGGAGTTTTTGGCACAATTTTCTAATCCAATATGCATGTTGATCCAATATGCATGTTaGTCCACAGCAACCAAACTG +
Preference number: 4 (lower is better)
Translates to: NSHQWEFLAQFSNPICMLIQYAC*STATKL
Trigger: CAGTTTGGTTGCTGTGGAGCAACATGCATATTGGAT...CAACATGCATATTGGATTAGAAAATTGTGCCAAAAACTCCCACTGATGAGAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
CDS-3UTR GCA 90 bp AGGTTCCTCACATTCTCTCTGCATGTGATCGTATTATTAATTTGTAGCAAAGGAACATTAAGGGGGCAATaGGGACTTTACAAGACAAAT +
Preference number: 4 (lower is better)
Translates to: RFLTFSLHVIVLLICSKGTLRGQ*GLYKTN
Trigger: ATTTGTCTTGTAAAGTCCGCATTGCCCCCTTAATGT...TCCTTTGCTACAAATTAATAATACGATCACATGCAGAGAGAATGTGAGGAACCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381620.9
CDS-3UTR GCA 90 bp AATCTCCATTATGCTCCACTCATTCCTTTATTTGTTCTGCCCATGGAGAGCATTCCAAATCTAGTTCCTTaGAGCTGTAGAATTAAGATT +
Preference number: 4 (lower is better)
Translates to: NLHYAPLIPLFVLPMESIPNLVP*SCRIKI
Trigger: AATCTTAATTCTACAGCTGCAAGGAACTAGATTTGG...AATGCTCTCCATGGGCAGAACAAATAAAGGAATGAGTGGAGCATAATGGAGATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR CCA 90 bp ACCCTTACCAAAACCTCTTCTGGTATACAAAGCTGTTGTAAATTTGAGTCAGCGTCGAAGCAACTTATTTaGCATTGTCATATTATGAGC +
Preference number: 4 (lower is better)
Translates to: TLTKTSSGIQSCCKFESASKQLI*HCHIMS
Trigger: GCTCATAATATGACAATGCCAAATAAGTTGCTTCGA...CGCTGACTCAAATTTACAACAGCTTTGTATACCAGAAGAGGTTTTGGTAAGGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
CDS-3UTR CCA 90 bp AAGCCTCCTCTTAGGCAGATACATAATCTACAGAGTATGAAAGGAAACAGCTGTTCGAAGCAACTTATTTaGCATTGTCATATTATGAGC +
Preference number: 4 (lower is better)
Translates to: KPPLRQIHNLQSMKGNSCSKQLI*HCHIMS
Trigger: GCTCATAATATGACAATGCCAAATAAGTTGCTTCGA...ACAGCTGTTTCCTTTCATACTCTGTAGATTATGTATCTGCCTAAGAGGAGGCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515082.5
CDS-3UTR CCA 90 bp CTAGTTTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCTCGAAGCAACTTATTTaGCATTGTCATATTATGAGC +
Preference number: 4 (lower is better)
Translates to: LVFLMCTKLPITLAGTLSSKQLI*HCHIMS
Trigger: GCTCATAATATGACAATGCCAAATAAGTTGCTTCGA...GCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAAACTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR CCA 90 bp CTCATCAGTGGGAGTTTTTGGCACAATTTTCTAATCCAATATGCATGTTGCTCCGGTACCAAACAAAACTaGAAAAACTATTCTGGACAT +
Preference number: 4 (lower is better)
Translates to: LISGSFWHNFLIQYACCSGTKQN*KNYSGH
Trigger: ATGTCCAGAATAGTTTTTCCAGTTTTGTTTGGTACC...GGAGCAACATGCATATTGGATTAGAAAATTGTGCCAAAAACTCCCACTGATGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
CDS-3UTR CCA 90 bp ACCCTTACCAAAACCTCTTCTGGTATACAAAGCTGTTGTAAATTTGAGTCAGCGGGTACCAAACAAAACTaGAAAAACTATTCTGGACAT +
Preference number: 4 (lower is better)
Translates to: TLTKTSSGIQSCCKFESAGTKQN*KNYSGH
Trigger: ATGTCCAGAATAGTTTTTCCAGTTTTGTTTGGTACC...CGCTGACTCAAATTTACAACAGCTTTGTATACCAGAAGAGGTTTTGGTAAGGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
CDS-3UTR CCA 90 bp CTAGTTTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCATGAATTCTCATCAGTaGGAGTTTTTGGCACAATTT +
Preference number: 4 (lower is better)
Translates to: LVFLMCTKLPITLAGTLSMNSHQ*EFLAQF
Trigger: AAATTGTGCCAAAAACTCCCACTGATGAGAATTCAT...GCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAAACTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
CDS-3UTR CCA 90 bp CAAATGCATGTCTCCATTAAAGGTCTACTGGTAAGCTATGTCACTATATACATAGTGTTTGTCATAGTGTaGGGCACCTATGAATTCTCA +
Preference number: 4 (lower is better)
Translates to: QMHVSIKGLLVSYVTIYIVFVIV*GTYEFS
Trigger: TGAGAATTCATAGGTGCCCCACACTATGACAAACAC...TATGTATATAGTGACATAGCTTACCAGTAGACCTTTAATGGAGACATGCATTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
CDS-3UTR CCA 90 bp GAACTGCTTTCACAAGAGAAAAATGTGCCAATTAACTGCCCTTTCCTTTATAATGTGTTTGTCATAGTGTaGGGCACCTATGAATTCTCA +
Preference number: 4 (lower is better)
Translates to: ELLSQEKNVPINCPFLYNVFVIV*GTYEFS
Trigger: TGAGAATTCATAGGTGCCCCACACTATGACAAACAC...ATTATAAAGGAAAGGGCAGTTAATTGGCACATTTTTCTCTTGTGAAAGCAGTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
CDS-3UTR CCA 90 bp CTAGTTTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCTGTTACAAGTGGTTTTaGTATAGTGTCCATGTTTCT +
Preference number: 4 (lower is better)
Translates to: LVFLMCTKLPITLAGTLSCYKWF*YSVHVS
Trigger: AGAAACATGGACACTATACCAAAACCACTTGTAACA...GCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAAACTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381620.9
CDS-3UTR CCA 90 bp CTAGTTTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCTTTCTTGGAATAAACTaGGCCATGAGAAAGCTATAT +
Preference number: 4 (lower is better)
Translates to: LVFLMCTKLPITLAGTLSFLGIN*AMRKLY
Trigger: ATATAGCTTTCTCATGGCCCAGTTTATTCCAAGAAA...GCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAAACTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000540012.5
ENST00000630416.2
CDS-3UTR TCA 90 bp ACTGGTAAGCTATGTCACTATATACATACTGTACATGTTGGATCACAAATTAGCACTCATGAACAGAGCTaGTGTCAGATACAATGTTTG +
Preference number: 4 (lower is better)
Translates to: TGKLCHYIHTVHVGSQISTHEQS*CQIQCL
Trigger: CAAACATTGTATCTGACATCAGCTCTGTTCATGAGT...GCTAATTTGTGATCCAACATGTACAGTATGTATATAGTGACATAGCTTACCAGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR TCA 90 bp TGGCAAATTCCGTTAATAAGTTGCATTTGTGACCTTGGTTTTATACAAGCATGCATAATTAGTGGCTTCTaGGTCTTGAAAAGAAGCCTT +
Preference number: 4 (lower is better)
Translates to: WQIPLISCICDLGFIQACIISGF*VLKRSL
Trigger: AAGGCTTCTTTTCAAGACTCAGAAGCCACTAATTAT...GCATGCTTGTATAAAACCAAGGTCACAAATGCAACTTATTAACGGAATTTGCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
CDS-3UTR TCA 90 bp TCAACCCTTACCAAAACCTCTTCTGGTATACAAAGCTGTTGTAAATTTGAGTCAACTGGAAACATTTCATaGAAGGTGATGTTCCTTAGT +
Preference number: 4 (lower is better)
Translates to: STLTKTSSGIQSCCKFESTGNIS*KVMFLS
Trigger: ACTAAGGAACATCACCTTTCATGAAATGTTTCCAGT...TGACTCAAATTTACAACAGCTTTGTATACCAGAAGAGGTTTTGGTAAGGGTTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381620.9
CDS-3UTR TCA 90 bp GCTACTGAATTTAAGGTTCAGCAGACCAATTTAACCCATCTATCAATCAACATTCACCTTTGTTTGATTTaGGGGTGCTTAATTCCTGAT +
Preference number: 4 (lower is better)
Translates to: ATEFKVQQTNLTHLSINIHLCLI*GCLIPD
Trigger: ATCAGGAATTAAGCACCCTCAAATCAAACAAAGGTG...AATGTTGATTGATAGATGGGTTAAATTGGTCTGCTGAACCTTAAATTCAGTAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR TCA 90 bp CATAATCAATTGACAAATGGTGAATTCTACATACTGTGCCAAGCACTAAGGACAAAACAAATAAAAGAATaGAACTGCGCACCATCCTTC +
Preference number: 4 (lower is better)
Translates to: HNQLTNGEFYILCQALRTKQIKE*NCAPSF
Trigger: GAAGGATGGTGCGCAGTTTCATTCTTTTATTTGTTT...TGTCCTTAGTGCTTGGCACAGTATGTAGAATTCACCATTTGTCAATTGATTATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR TCA 90 bp GTTTTTCAAGCTCCAAAGCCTGATCTTTTCCAAAGTACACTATATTGTGTCTCACTGTCTCTGATCTCTTaGTTTAGATTTAAAAGGCTC +
Preference number: 4 (lower is better)
Translates to: VFQAPKPDLFQSTLYCVSLSLIS*FRFKRL
Trigger: GAGCCTTTTAAATCTAAATCAAGAGATCAGAGACAG...TGAGACACAATATAGTGTACTTTGGAAAAGATCAGGCTTTGGAGCTTGAAAAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR GCA 90 bp TGTTCAACCCTTACCAAAACCTCTTCTGGTATACAAAGCTGTTGTAAATTTGAGTTGTATATGCATAGCTaGCAAATTTCAGAGGACATG +
Preference number: 4 (lower is better)
Translates to: CSTLTKTSSGIQSCCKFELYMHS*QISEDM
Trigger: CATGTCCTCTGAAATTTGGCAGCTATGCATATACAA...CTCAAATTTACAACAGCTTTGTATACCAGAAGAGGTTTTGGTAAGGGTTGAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
CDS-3UTR GCA 90 bp TGTTCAACCCTTACCAAAACCTCTTCTGGTATACAAAGCTGTTGTAAATTTGAGGTTGAAAGTTTTCTTTaGTTCAGCTGGCTTGTTTTC +
Preference number: 4 (lower is better)
Translates to: CSTLTKTSSGIQSCCKFEVESFL*FSWLVF
Trigger: GAAAACAAGCCAGCTGAAGCAAAGAAAACTTTCAAC...CTCAAATTTACAACAGCTTTGTATACCAGAAGAGGTTTTGGTAAGGGTTGAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
CDS-3UTR GCA 90 bp GAACTGCTTTCACAAGAGAAAAATGTGCCAATTAACTGCCCTTTCCTTTATAATATAGAGCAATTTCATTaGTTGCCTTCTGGCATTGTG +
Preference number: 4 (lower is better)
Translates to: ELLSQEKNVPINCPFLYNIEQFH*LPSGIV
Trigger: CACAATGCCAGAAGGCAAGCAATGAAATTGCTCTAT...ATTATAAAGGAAAGGGCAGTTAATTGGCACATTTTTCTCTTGTGAAAGCAGTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381620.9
CDS-3UTR GCA 90 bp TGTTCAACCCTTACCAAAACCTCTTCTGGTATACAAAGCTGTTGTAAATTTGAGTCTGCAACTAACTCTTaGTTTCTTAGCATCAGTTGT +
Preference number: 4 (lower is better)
Translates to: CSTLTKTSSGIQSCCKFESATNS*FLSISC
Trigger: ACAACTGATGCTAAGAAAGCAAGAGTTAGTTGCAGA...CTCAAATTTACAACAGCTTTGTATACCAGAAGAGGTTTTGGTAAGGGTTGAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381620.9
CDS-3UTR GCA 90 bp GCTACTGAATTTAAGGTTCAGCAGACCAATTTAACCCATCTATCAATCAACATTTTTTCTGCTAAACACTaGACTGTCCTTTCTGATCCT +
Preference number: 4 (lower is better)
Translates to: ATEFKVQQTNLTHLSINIFSAKH*TVLSDP
Trigger: AGGATCAGAAAGGACAGTGCAGTGTTTAGCAGAAAA...AATGTTGATTGATAGATGGGTTAAATTGGTCTGCTGAACCTTAAATTCAGTAGC
37% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR CCA 90 bp CAAATGCATGTCTCCATTAAAGGTCTACTGGTAAGCTATGTCACTATATACATAATCCCAAAGATAACATaGGTCTCAATTCAAGGACTG +
Preference number: 4 (lower is better)
Translates to: QMHVSIKGLLVSYVTIYIIPKIT*VSIQGL
Trigger: CAGTCCTTGAATTGAGACCCATGTTATCTTTGGGAT...TATGTATATAGTGACATAGCTTACCAGTAGACCTTTAATGGAGACATGCATTTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR CCA 90 bp AATTCTCATCAGTGGGAGTTTTTGGCACAATTTTCTAATCCAATATGCATGTTGATCCCAAAGATAACATaGGTCTCAATTCAAGGACTG +
Preference number: 4 (lower is better)
Translates to: NSHQWEFLAQFSNPICMLIPKIT*VSIQGL
Trigger: CAGTCCTTGAATTGAGACCCATGTTATCTTTGGGAT...CAACATGCATATTGGATTAGAAAATTGTGCCAAAAACTCCCACTGATGAGAATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
CDS-3UTR CCA 90 bp AATTCTCATCAGTGGGAGTTTTTGGCACAATTTTCTAATCCAATATGCATGTTGCCACACTGTTACAAGTaGTTTTGGTATAGTGTCCAT +
Preference number: 4 (lower is better)
Translates to: NSHQWEFLAQFSNPICMLPHCYK*FWYSVH
Trigger: ATGGACACTATACCAAAACCACTTGTAACAGTGTGG...CAACATGCATATTGGATTAGAAAATTGTGCCAAAAACTCCCACTGATGAGAATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381620.9
CDS-3UTR CCA 90 bp TGGCAAATTCCGTTAATAAGTTGCATTTGTGACCTTGGTTTTATACAAGCATGCTTCAACTTAACAAGATaGAAGACACAGTGGTCTAGA +
Preference number: 4 (lower is better)
Translates to: WQIPLISCICDLGFIQACFNLTR*KTQWSR
Trigger: TCTAGACCACTGTGTCTTCCATCTTGTTAAGTTGAA...GCATGCTTGTATAAAACCAAGGTCACAAATGCAACTTATTAACGGAATTTGCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381620.9
CDS-3UTR CCA 90 bp TTTCTTGGAATAAACTGGGCCATGAGAAAGCTATATACTTGGACCATATTAGCTTCTAAAGTCTTTTCTTaGAATAAACTGGGCCATGAG +
Preference number: 4 (lower is better)
Translates to: FLGINWAMRKLYTWTILASKVFS*NKLGHE
Trigger: CTCATGGCCCAGTTTATTCCAAGAAAAGACTTTAGA...AGCTAATATGGTCCAAGTATATAGCTTTCTCATGGCCCAGTTTATTCCAAGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630416.2
CDS-3UTR CCA 90 bp GCTACTGAATTTAAGGTTCAGCAGACCAATTTAACCCATCTATCAATCAACATTACATTGTGTCACATCTaGGCAGAAGCTTTAAATGAC +
Preference number: 4 (lower is better)
Translates to: ATEFKVQQTNLTHLSINITLCHI*AEALND
Trigger: GTCATTTAAAGCTTCTGCCCAGATGTGACACAATGT...AATGTTGATTGATAGATGGGTTAAATTGGTCTGCTGAACCTTAAATTCAGTAGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR CCA 90 bp GCTACTGAATTTAAGGTTCAGCAGACCAATTTAACCCATCTATCAATCAACATTACCTGTATTCAAGTCTaGATATACGTCAAACTCAGG +
Preference number: 4 (lower is better)
Translates to: ATEFKVQQTNLTHLSINITCIQV*IYVKLR
Trigger: CCTGAGTTTGACGTATATCCAGACTTGAATACAGGT...AATGTTGATTGATAGATGGGTTAAATTGGTCTGCTGAACCTTAAATTCAGTAGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR TCA 90 bp ACTGGTAAGCTATGTCACTATATACATACTGTACATGTTGGATCACAAATTAGCTCTTTAACAGCAAGATaGCCAAGTAATCAGACTTCT +
Preference number: 4 (lower is better)
Translates to: TGKLCHYIHTVHVGSQISSLTAR*PSNQTS
Trigger: AGAAGTCTGATTACTTGGTCATCTTGCTGTTAAAGA...GCTAATTTGTGATCCAACATGTACAGTATGTATATAGTGACATAGCTTACCAGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356504.5
CDS-3UTR TCA 90 bp CAAATGCATGTCTCCATTAAAGGTCTACTGGTAAGCTATGTCACTATATACATACTTTTCAGGTGGAAATaGGCTGTCATTACAGTATAT +
Preference number: 4 (lower is better)
Translates to: QMHVSIKGLLVSYVTIYILFRWK*AVITVY
Trigger: ATATACTGTAATGACAGCTCATTTCCACCTGAAAAG...TATGTATATAGTGACATAGCTTACCAGTAGACCTTTAATGGAGACATGCATTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR TCA 90 bp GAACTGCTTTCACAAGAGAAAAATGTGCCAATTAACTGCCCTTTCCTTTATAATCTTTTCAGGTGGAAATaGGCTGTCATTACAGTATAT +
Preference number: 4 (lower is better)
Translates to: ELLSQEKNVPINCPFLYNLFRWK*AVITVY
Trigger: ATATACTGTAATGACAGCTCATTTCCACCTGAAAAG...ATTATAAAGGAAAGGGCAGTTAATTGGCACATTTTTCTCTTGTGAAAGCAGTTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
CDS-3UTR TCA 90 bp AGTGGTTTTAATGGAAGTATTAGTACTACAAGAACTCCTAAAGGATTTCAGGCACTTTTCAGGTGGAAATaGGCTGTCATTACAGTATAT +
Preference number: 4 (lower is better)
Translates to: SGFNGSISTTRTPKGFQALFRWK*AVITVY
Trigger: ATATACTGTAATGACAGCTCATTTCCACCTGAAAAG...TGCCTGAAATCCTTTAGGAGTTCTTGTAGTACTAATACTTCCATTAAAACCACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515082.5
CDS-3UTR TCA 90 bp CAAATGCATGTCTCCATTAAAGGTCTACTGGTAAGCTATGTCACTATATACATATCCACAATCTATTGGTaGTGTTTTAAAGTTGCAGTG +
Preference number: 4 (lower is better)
Translates to: QMHVSIKGLLVSYVTIYISTIYW*CFKVAV
Trigger: CACTGCAACTTTAAAACATCACCAATAGATTGTGGA...TATGTATATAGTGACATAGCTTACCAGTAGACCTTTAATGGAGACATGCATTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
CDS-3UTR TCA 90 bp ACTGGTAAGCTATGTCACTATATACATACTGTACATGTTGGATCACAAATTAGCTCCACAATCTATTGGTaGTGTTTTAAAGTTGCAGTG +
Preference number: 4 (lower is better)
Translates to: TGKLCHYIHTVHVGSQISSTIYW*CFKVAV
Trigger: CACTGCAACTTTAAAACATCACCAATAGATTGTGGA...GCTAATTTGTGATCCAACATGTACAGTATGTATATAGTGACATAGCTTACCAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
CDS-3UTR TCA 90 bp GCTACTGAATTTAAGGTTCAGCAGACCAATTTAACCCATCTATCAATCAACATTATACTTATGTGGCAATaGTCAGATAAAACTCAACCC +
Preference number: 4 (lower is better)
Translates to: ATEFKVQQTNLTHLSINIILMWQ*SDKTQP
Trigger: GGGTTGAGTTTTATCTGATCATTGCCACATAAGTAT...AATGTTGATTGATAGATGGGTTAAATTGGTCTGCTGAACCTTAAATTCAGTAGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR GCA 90 bp ACTGGTAAGCTATGTCACTATATACATACTGTACATGTTGGATCACAAATTAGCTTGTATATGCATAGCTaGCAAATTTCAGAGGACATG +
Preference number: 4 (lower is better)
Translates to: TGKLCHYIHTVHVGSQISLYMHS*QISEDM
Trigger: CATGTCCTCTGAAATTTGGCAGCTATGCATATACAA...GCTAATTTGTGATCCAACATGTACAGTATGTATATAGTGACATAGCTTACCAGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR GCA 90 bp AATTCTCATCAGTGGGAGTTTTTGGCACAATTTTCTAATCCAATATGCATGTTGTTGTATATGCATAGCTaGCAAATTTCAGAGGACATG +
Preference number: 4 (lower is better)
Translates to: NSHQWEFLAQFSNPICMLLYMHS*QISEDM
Trigger: CATGTCCTCTGAAATTTGGCAGCTATGCATATACAA...CAACATGCATATTGGATTAGAAAATTGTGCCAAAAACTCCCACTGATGAGAATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
CDS-3UTR GCA 90 bp ACTGGTAAGCTATGTCACTATATACATACTGTACATGTTGGATCACAAATTAGCGTTGAAAGTTTTCTTTaGTTCAGCTGGCTTGTTTTC +
Preference number: 4 (lower is better)
Translates to: TGKLCHYIHTVHVGSQISVESFL*FSWLVF
Trigger: GAAAACAAGCCAGCTGAAGCAAAGAAAACTTTCAAC...GCTAATTTGTGATCCAACATGTACAGTATGTATATAGTGACATAGCTTACCAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR GCA 90 bp AATTCTCATCAGTGGGAGTTTTTGGCACAATTTTCTAATCCAATATGCATGTTGGTTGAAAGTTTTCTTTaGTTCAGCTGGCTTGTTTTC +
Preference number: 4 (lower is better)
Translates to: NSHQWEFLAQFSNPICMLVESFL*FSWLVF
Trigger: GAAAACAAGCCAGCTGAAGCAAAGAAAACTTTCAAC...CAACATGCATATTGGATTAGAAAATTGTGCCAAAAACTCCCACTGATGAGAATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
CDS-3UTR GCA 90 bp TGTTCAACCCTTACCAAAACCTCTTCTGGTATACAAAGCTGTTGTAAATTTGAGTATTTGAGCTTGTCATaGTGTAATATGTACATGGCT +
Preference number: 4 (lower is better)
Translates to: CSTLTKTSSGIQSCCKFEYLSLS*CNMYMA
Trigger: AGCCATGTACATATTACAGCATGACAAGCTCAAATA...CTCAAATTTACAACAGCTTTGTATACCAGAAGAGGTTTTGGTAAGGGTTGAACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
CDS-3UTR GCA 90 bp GTTTTTCAAGCTCCAAAGCCTGATCTTTTCCAAAGTACACTATATTGTGTCTCAAAAGTGTCACATCAATaGCATATCGTATTCTGTAGA +
Preference number: 4 (lower is better)
Translates to: VFQAPKPDLFQSTLYCVSKVSHQ*HIVFCR
Trigger: TCTACAGAATACGATATGGCATTGATGTGACACTTT...TGAGACACAATATAGTGTACTTTGGAAAAGATCAGGCTTTGGAGCTTGAAAAAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR GCA 90 bp AGTTGTGTAAGCTTGGGCAAGAAAATAACTTTACTGCTTCAGATTCTTCATGAGCAGCTGTTATATCAATaGACAAATCTCCCATTAGAT +
Preference number: 4 (lower is better)
Translates to: SCVSLGKKITLLLQILHEQLLYQ*TNLPLD
Trigger: ATCTAATGGGAGATTTGTGCATTGATATAACAGCTG...CTCATGAAGAATCTGAAGCAGTAAAGTTATTTTCTTGCCCAAGCTTACACAACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515082.5
CDS-3UTR CCA 90 bp TCCCATCATCCTGAATTCGAAGCAACTTATTTGGCATTGTCATATTATGAGCTATCGAAGCAACTTATTTaGCATTGTCATATTATGAGC +
Preference number: 4 (lower is better)
Translates to: SHHPEFEATYLALSYYELSKQLI*HCHIMS
Trigger: GCTCATAATATGACAATGCCAAATAAGTTGCTTCGA...TAGCTCATAATATGACAATGCCAAATAAGTTGCTTCGAATTCAGGATGATGGGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000513005.5
ENST00000514193.5
ENST00000630416.2
CDS-3UTR CCA 90 bp TCCCATCATCCTGAATTCGAAGCAACTTATTTGGCATTGTCATATTATGAGCTAGGTACCAAACAAAACTaGAAAAACTATTCTGGACAT +
Preference number: 4 (lower is better)
Translates to: SHHPEFEATYLALSYYELGTKQN*KNYSGH
Trigger: ATGTCCAGAATAGTTTTTCCAGTTTTGTTTGGTACC...TAGCTCATAATATGACAATGCCAAATAAGTTGCTTCGAATTCAGGATGATGGGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000513005.5
ENST00000630416.2
CDS-3UTR CCA 90 bp TCAACCCTTACCAAAACCTCTTCTGGTATACAAAGCTGTTGTAAATTTGAGTCAATGAATTCTCATCAGTaGGAGTTTTTGGCACAATTT +
Preference number: 4 (lower is better)
Translates to: STLTKTSSGIQSCCKFESMNSHQ*EFLAQF
Trigger: AAATTGTGCCAAAAACTCCCACTGATGAGAATTCAT...TGACTCAAATTTACAACAGCTTTGTATACCAGAAGAGGTTTTGGTAAGGGTTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
CDS-3UTR CCA 90 bp TGGCAAATTCCGTTAATAAGTTGCATTTGTGACCTTGGTTTTATACAAGCATGCATGAATTCTCATCAGTaGGAGTTTTTGGCACAATTT +
Preference number: 4 (lower is better)
Translates to: WQIPLISCICDLGFIQACMNSHQ*EFLAQF
Trigger: AAATTGTGCCAAAAACTCCCACTGATGAGAATTCAT...GCATGCTTGTATAAAACCAAGGTCACAAATGCAACTTATTAACGGAATTTGCCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
CDS-3UTR CCA 90 bp TCAACCCTTACCAAAACCTCTTCTGGTATACAAAGCTGTTGTAAATTTGAGTCAAGATGGAAGACACAGTaGTCTAGATATGTTGATAAT +
Preference number: 4 (lower is better)
Translates to: STLTKTSSGIQSCCKFESRWKTQ*SRYVDN
Trigger: ATTATCAACATATCTAGACCACTGTGTCTTCCATCT...TGACTCAAATTTACAACAGCTTTGTATACCAGAAGAGGTTTTGGTAAGGGTTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381620.9
CDS-3UTR CCA 90 bp GCTACTGAATTTAAGGTTCAGCAGACCAATTTAACCCATCTATCAATCAACATTCCTTATTCTCCTGTTTaGTTCTGTACTTCCATAGAT +
Preference number: 4 (lower is better)
Translates to: ATEFKVQQTNLTHLSINIPYSPV*FCTSID
Trigger: ATCTATGGAAGTACAGAACCAAACAGGAGAATAAGG...AATGTTGATTGATAGATGGGTTAAATTGGTCTGCTGAACCTTAAATTCAGTAGC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507460.1
3UTR CAA 72 bp CTGGTAAGCTATGTCACTATATACATACTGTACATGTaGGATCACAAATTAGCAGTTATTAGTCAGACTGTA +
Preference number: 4 (lower is better)
Translates to: LVSYVTIYILYM*DHKLAVISQTV
Trigger: TACAGTCTGACTAATAACTGCTAATTTGTGATCCAACATGTACAGTATGTATATAGTGACATAGCTTACCAG
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR GCA 90 bp CAAATGCATGTCTCCATTAAAGGTCTACTGGTAAGCTATGTCACTATATACATATATTTGAGCTTGTCATaGTGTAATATGTACATGGCT +
Preference number: 4 (lower is better)
Translates to: QMHVSIKGLLVSYVTIYIYLSLS*CNMYMA
Trigger: AGCCATGTACATATTACAGCATGACAAGCTCAAATA...TATGTATATAGTGACATAGCTTACCAGTAGACCTTTAATGGAGACATGCATTTG
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR GCA 90 bp AATTCTCATCAGTGGGAGTTTTTGGCACAATTTTCTAATCCAATATGCATGTTGTATTTGAGCTTGTCATaGTGTAATATGTACATGGCT +
Preference number: 4 (lower is better)
Translates to: NSHQWEFLAQFSNPICMLYLSLS*CNMYMA
Trigger: AGCCATGTACATATTACAGCATGACAAGCTCAAATA...CAACATGCATATTGGATTAGAAAATTGTGCCAAAAACTCCCACTGATGAGAATT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
CDS-3UTR CCA 90 bp ACTGGTAAGCTATGTCACTATATACATACTGTACATGTTGGATCACAAATTAGCTCGAAGCAACTTATTTaGCATTGTCATATTATGAGC +
Preference number: 4 (lower is better)
Translates to: TGKLCHYIHTVHVGSQISSKQLI*HCHIMS
Trigger: GCTCATAATATGACAATGCCAAATAAGTTGCTTCGA...GCTAATTTGTGATCCAACATGTACAGTATGTATATAGTGACATAGCTTACCAGT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR CCA 90 bp CAAATGCATGTCTCCATTAAAGGTCTACTGGTAAGCTATGTCACTATATACATATCGAAGCAACTTATTTaGCATTGTCATATTATGAGC +
Preference number: 4 (lower is better)
Translates to: QMHVSIKGLLVSYVTIYISKQLI*HCHIMS
Trigger: GCTCATAATATGACAATGCCAAATAAGTTGCTTCGA...TATGTATATAGTGACATAGCTTACCAGTAGACCTTTAATGGAGACATGCATTTG
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR CCA 90 bp CAAATGCATGTCTCCATTAAAGGTCTACTGGTAAGCTATGTCACTATATACATAGGTACCAAACAAAACTaGAAAAACTATTCTGGACAT +
Preference number: 4 (lower is better)
Translates to: QMHVSIKGLLVSYVTIYIGTKQN*KNYSGH
Trigger: ATGTCCAGAATAGTTTTTCCAGTTTTGTTTGGTACC...TATGTATATAGTGACATAGCTTACCAGTAGACCTTTAATGGAGACATGCATTTG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR CCA 90 bp ACTGGTAAGCTATGTCACTATATACATACTGTACATGTTGGATCACAAATTAGCGGTACCAAACAAAACTaGAAAAACTATTCTGGACAT +
Preference number: 4 (lower is better)
Translates to: TGKLCHYIHTVHVGSQISGTKQN*KNYSGH
Trigger: ATGTCCAGAATAGTTTTTCCAGTTTTGTTTGGTACC...GCTAATTTGTGATCCAACATGTACAGTATGTATATAGTGACATAGCTTACCAGT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR CCA 90 bp ACTGGTAAGCTATGTCACTATATACATACTGTACATGTTGGATCACAAATTAGCATAGGTATAATCTTATaGGCCAAAGAGATCAGTGTT +
Preference number: 4 (lower is better)
Translates to: TGKLCHYIHTVHVGSQISIGIIL*AKEISV
Trigger: AACACTGATCTCTTTGGCCCATAAGATTATACCTAT...GCTAATTTGTGATCCAACATGTACAGTATGTATATAGTGACATAGCTTACCAGT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381620.9
CDS CCA 90 bp CGCCTGGCACTAGCAGCGGCGCAGACCCGGGCGGCGTCGGGCGCCTaGGTGCGCTCGGAGCGCCGCTCCCCTCGCCCACACCTCGCCGGA +
Preference number: 5 (lower is better)
Translates to: RLALAAAQTRAASGA*VRSERRSPRPHLAG
Trigger: TCCGGCGAGGTGTGGGCGAGGGGAGCGGCGCTCCGAGCGCACCCAGGCGCCCGACGCCGCCCGGGTCTGCGCCGCTGCTAGTGCCAGGCG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515082.5
CDS CCA 90 bp GAGAGACCGAGACTGCAGCAGCCAAGAGAGCGTGGAGCGATGGGCTaGTGGAAGCCGGAGAGGAGCGCTAGGAGCCGCGGCGGCGGCGCG +
Preference number: 5 (lower is better)
Translates to: ERPRLQQPRERGAMG*WKPERSARSRGGGA
Trigger: CGCGCCGCCGCCGCGGCTCCTAGCGCTCCTCTCCGGCTTCCACCAGCCCATCGCTCCACGCTCTCTTGGCTGCTGCAGTCTCGGTCTCTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381620.9
ENST00000540012.5
CDS CCA 90 bp AGAGAGAGAGACCGAGACTGCAGCAGCCAAGAGAGCGTGGAGCGATaGGCTGGTGGAAGCCGGAGAGGAGCGCTAGGAGCCGCGGCGGCG +
Preference number: 5 (lower is better)
Translates to: RERDRDCSSQESVER*AGGSRRGALGAAAA
Trigger: CGCCGCCGCGGCTCCTAGCGCTCCTCTCCGGCTTCCACCAGCCCATCGCTCCACGCTCTCTTGGCTGCTGCAGTCTCGGTCTCTCTCTCT
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381620.9
ENST00000540012.5
CDS GCA 90 bp GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACCGAGACTaGAGCAGCCAAGAGAGCGTGGAGCGATGGGCTGGTGGAAGCCGG +
Preference number: 5 (lower is better)
Translates to: ERERERERERERDRD*SSQESVERWAGGSR
Trigger: CCGGCTTCCACCAGCCCATCGCTCCACGCTCTCTTGGCTGCTGCAGTCTCGGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381620.9
ENST00000540012.5
CDS GCA 90 bp GGTTGCCCAAGACCAAGTCTTAGAGGCAGCCGGGTTCCGATCAAGTaGTGCGAAACGACGCGTTTGACAGCTGCTCTGGAGCCGAGGATC +
Preference number: 5 (lower is better)
Translates to: GCPRPSLRGSRVPIK*CETTRLTAALEPRI
Trigger: GATCCTCGGCTCCAGAGCAGCTGTCAAACGCGTCGTTTCGCAGCACTTGATCGGAACCCGGCTGCCTCTAAGACTTGGTCTTGGGCAACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS GCA 90 bp TGCCCAAGACCAAGTCTTAGAGGCAGCCGGGTTCCGATCAAGTGCTaGGAAACGACGCGTTTGACAGCTGCTCTGGAGCCGAGGATCACA +
Preference number: 5 (lower is better)
Translates to: CPRPSLRGSRVPIKC*ETTRLTAALEPRIT
Trigger: TGTGATCCTCGGCTCCAGAGCAGCTGTCAAACGCGTCGTTTCGCAGCACTTGATCGGAACCCGGCTGCCTCTAAGACTTGGTCTTGGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR CAA 90 bp AGCTGGCTTGTTTTCTGGCTTCTTGTTGGGTTCTGGCGTGGTTGCACTCTTGGATGGGTTCTGGCGTGGTaGCACTCTTGGAGATGGTGG +
Preference number: 5 (lower is better)
Translates to: SWLVFWLLVGFWRGCTLGWVLAW*HSWRWW
Trigger: CCACCATCTCCAAGAGTGCAACCACGCCAGAACCCA...TCCAAGAGTGCAACCACGCCAGAACCCAACAAGAAGCCAGAAAACAAGCCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000510233.5
ENST00000513005.5
ENST00000630416.2
CDS-3UTR CAA 90 bp AGCTGGCTTGTTTTCTGGCTTCTTGTTGGGTTCTGGCGTGGTTGCACTCTTGGAGGCGTGGTTGCACTCTaGGAGATGGTGGAGAGAACT +
Preference number: 5 (lower is better)
Translates to: SWLVFWLLVGFWRGCTLGGVVAL*EMVERT
Trigger: AGTTCTCTCCACCATCTCCAAGAGTGCAACCACGCC...TCCAAGAGTGCAACCACGCCAGAACCCAACAAGAAGCCAGAAAACAAGCCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000510233.5
ENST00000513005.5
ENST00000630416.2
CDS-3UTR CAA 90 bp CGGGGCATAATTGGCAACAGCCACTGCATAAGCGTTGTTCTGTATCATAACGGATGGGTTCTGGCGTGGTaGCACTCTTGGAGATGGTGG +
Preference number: 5 (lower is better)
Translates to: RGIIGNSHCISVVLYHNGWVLAW*HSWRWW
Trigger: CCACCATCTCCAAGAGTGCAACCACGCCAGAACCCA...TCCGTTATGATACAGAACAACGCTTATGCAGTGGCTGTTGCCAATTATGCCCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000510233.5
ENST00000513005.5
ENST00000630416.2
CDS-3UTR CAA 90 bp CAGCTGGCTTGTTTTCTGGCTTCTTGTTGGGTTCTGGCGTGGTTGCACTCTTGGTTTTCTGGCTTCTTGTaGGGTTCTGGCGTGGTTGCA +
Preference number: 5 (lower is better)
Translates to: QLACFLASCWVLAWLHSWFSGFL*GSGVVA
Trigger: TGCAACCACGCCAGAACCCAACAAGAAGCCAGAAAA...CCAAGAGTGCAACCACGCCAGAACCCAACAAGAAGCCAGAAAACAAGCCAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000510233.5
ENST00000513005.5
ENST00000630416.2
CDS GCA 90 bp GTTAGCCAGCACCAACTTTGGGTATACCTCCACCCAATGGCCAAGTaGAATATAAGCATCAGGGAAACTCCACTGGCTATGTGCCAGGCT +
Preference number: 5 (lower is better)
Translates to: VSQHQLWVYLHPMAK*NISIRETPLAMCQA
Trigger: AGCCTGGCACATAGCCAGTGGAGTTTCCCTGATGCTTATATTGCACTTGGCCATTGGGTGGAGGTATACCCAAAGTTGGTGCTGGCTAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509716.2
CDS GCA 90 bp TCTGCCAGGAACGTCCCCCAGCCTCATCGTCAGCAAACACTGTTTTaGGCACACGTAATAATAACACCCTGGACTTTAAACTGGCATAGC +
Preference number: 5 (lower is better)
Translates to: SARNVPQPHRQQTLF*AHVIITPWTLNWHS
Trigger: GCTATGCCAGTTTAAAGTCCAGGGTGTTATTATTACGTGTGCGCAAAACAGTGTTTGCTGACGATGAGGCTGGGGGACGTTCCTGGCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356504.5
CDS-3UTR CAA 90 bp AGCTGGCTTGTTTTCTGGCTTCTTGTTGGGTTCTGGCGTGGTTGCACTCTTGGATTTAGCCTCATCTTCTaGGATGTTAGCCAGCACCAA +
Preference number: 5 (lower is better)
Translates to: SWLVFWLLVGFWRGCTLGFSLIF*DVSQHQ
Trigger: TTGGTGCTGGCTAACATCCAAGAAGATGAGGCTAAA...TCCAAGAGTGCAACCACGCCAGAACCCAACAAGAAGCCAGAAAACAAGCCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000510233.5
ENST00000513005.5
ENST00000630416.2
CDS-3UTR CAA 90 bp GTTGCACTCTTGGAGATGGTGGAGAGAACTGGATCTTTTGAAAGATTCGGGGCATTGTCTCCTTTCCGATaGATTGGCCCAGCAGGTCAT +
Preference number: 5 (lower is better)
Translates to: VALLEMVERTGSFERFGALSPFR*IGPAGH
Trigger: ATGACCTGCTGGGCCAATCAATCGGAAAGGAGACAA...TGCCCCGAATCTTTCAAAAGATCCAGTTCTCTCCACCATCTCCAAGAGTGCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630416.2
CDS-3UTR CAA 90 bp AATCTCCATTATGCTCCACTCATTCCTTTATTTGTTCTGCCCATGGAGAGCATTTGCGAAACGACGCGTTaGACAGCTGCTCTGGAGCCG +
Preference number: 5 (lower is better)
Translates to: NLHYAPLIPLFVLPMESICETTR*TAALEP
Trigger: CGGCTCCAGAGCAGCTGTCAAACGCGTCGTTTCGCA...AATGCTCTCCATGGGCAGAACAAATAAAGGAATGAGTGGAGCATAATGGAGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR CAA 90 bp TTGAACAATGGACTGTGGGCAGAGGGACATTGTGTCACATCTGGGCAGAAGCTTCCAGCATGCTATGTCTaGGTTCTCTGCTCAGATTCT +
Preference number: 5 (lower is better)
Translates to: LNNGLWAEGHCVTSGQKLPACYV*VLCSDS
Trigger: AGAATCTGAGCAGAGAACCAAGACATAGCATGCTGG...AAGCTTCTGCCCAGATGTGACACAATGTCCCTCTGCCCACAGTCCATTGTTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR CAA 90 bp GGTTCTGGCGTGGTTGCACTCTTGGAGATGGTGGAGAGAACTGGATCTTTTGAATTTAGCCTCATCTTCTaGGATGTTAGCCAGCACCAA +
Preference number: 5 (lower is better)
Translates to: GSGVVALLEMVERTGSFEFSLIF*DVSQHQ
Trigger: TTGGTGCTGGCTAACATCCAAGAAGATGAGGCTAAA...TTCAAAAGATCCAGTTCTCTCCACCATCTCCAAGAGTGCAACCACGCCAGAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000510233.5
ENST00000513005.5
ENST00000630416.2
CDS-3UTR CAA 90 bp CAGCTGGCTTGTTTTCTGGCTTCTTGTTGGGTTCTGGCGTGGTTGCACTCTTGGAGAGAACTGGATCTTTaGAAAGATTCGGGGCATAAT +
Preference number: 5 (lower is better)
Translates to: QLACFLASCWVLAWLHSWRELDL*KDSGHN
Trigger: ATTATGCCCCGAATCTTTCAAAAGATCCAGTTCTCT...CCAAGAGTGCAACCACGCCAGAACCCAACAAGAAGCCAGAAAACAAGCCAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000510233.5
ENST00000513005.5
ENST00000630416.2
CDS-3UTR CAA 90 bp TTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCACTCATGGGTTCTGGCGTGGTaGCACTCTTGGAGATGGTGG +
Preference number: 5 (lower is better)
Translates to: FSYVYQASNYISRDSEHSWVLAW*HSWRWW
Trigger: CCACCATCTCCAAGAGTGCAACCACGCCAGAACCCA...TGAGTGCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR CAA 90 bp CTCATCAGTGGGAGTTTTTGGCACAATTTTCTAATCCAATATGCATGTTGCTCCTGGGTTCTGGCGTGGTaGCACTCTTGGAGATGGTGG +
Preference number: 5 (lower is better)
Translates to: LISGSFWHNFLIQYACCSWVLAW*HSWRWW
Trigger: CCACCATCTCCAAGAGTGCAACCACGCCAGAACCCA...GGAGCAACATGCATATTGGATTAGAAAATTGTGCCAAAAACTCCCACTGATGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
CDS-3UTR CAA 90 bp ACCCTTACCAAAACCTCTTCTGGTATACAAAGCTGTTGTAAATTTGAGTCAGCGTGGGTTCTGGCGTGGTaGCACTCTTGGAGATGGTGG +
Preference number: 5 (lower is better)
Translates to: TLTKTSSGIQSCCKFESAWVLAW*HSWRWW
Trigger: CCACCATCTCCAAGAGTGCAACCACGCCAGAACCCA...CGCTGACTCAAATTTACAACAGCTTTGTATACCAGAAGAGGTTTTGGTAAGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
CDS-3UTR CAA 90 bp ACCCTTACCAAAACCTCTTCTGGTATACAAAGCTGTTGTAAATTTGAGTCAGCGCACCGGTGGCATCCCTaGGGATCAATTCAGGCGTCA +
Preference number: 5 (lower is better)
Translates to: TLTKTSSGIQSCCKFESAHRWHP*GSIQAS
Trigger: TGACGCCTGAATTGATCCCAAGGGATGCCACCGGTG...CGCTGACTCAAATTTACAACAGCTTTGTATACCAGAAGAGGTTTTGGTAAGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381620.9
CDS CCA 90 bp CATCGTCAGCAAACACTGTTTTGCGCACACGTAATAATAACACCCTaGACTTTAAACTGGCATAGCAGCTGGAAAGGGAATGGGTTGGAG +
Preference number: 5 (lower is better)
Translates to: HRQQTLFCAHVIITP*TLNWHSSWKGNGLE
Trigger: CTCCAACCCATTCCCTTTCCAGCTGCTATGCCAGTTTAAAGTCCAGGGTGTTATTATTACGTGTGCGCAAAACAGTGTTTGCTGACGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356504.5
CDS CCA 90 bp GTAGGGTTGCACTTCCCTGCCACCTTGAAGTTAAACATGTGTATATaGTTTCCTTTGAACAATGGACTGTGGGCAGAGGGACATTGTGTC +
Preference number: 5 (lower is better)
Translates to: VGLHFPATLKLNMCI*FPLNNGLWAEGHCV
Trigger: GACACAATGTCCCTCTGCCCACAGTCCATTGTTCAAAGGAAACCATATACACATGTTTAACTTCAAGGTGGCAGGGAAGTGCAACCCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR CAA 90 bp AATGAGCATCCATTGGGAAATCCTCCAAGTGCATTGGGCATTCAGCTTGAACTGCATTGGGCATTCAGCTaGAACTGTAAGCCTCATGGT +
Preference number: 5 (lower is better)
Translates to: NEHPLGNPPSALGIQLELHWAFS*NCKPHG
Trigger: ACCATGAGGCTTACAGTTCAAGCTGAATGCCCAATG...CAGTTCAAGCTGAATGCCCAATGCACTTGGAGGATTTCCCAATGGATGCTCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000513005.5
ENST00000514193.5
ENST00000630416.2
CDS-3UTR CAA 90 bp TTGCACTCTTGGAGATGGTGGAGAGAACTGGATCTTTTGAAAGATTCGGGGCATAATCCTCCAAGTGCATaGGGCATTCAGCTTGAACTG +
Preference number: 5 (lower is better)
Translates to: LHSWRWWRELDLLKDSGHNPPSA*GIQLEL
Trigger: CAGTTCAAGCTGAATGCCCAATGCACTTGGAGGATT...ATGCCCCGAATCTTTCAAAAGATCCAGTTCTCTCCACCATCTCCAAGAGTGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000513005.5
ENST00000630416.2
CDS-3UTR CAA 90 bp TTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCACTCAGGCGTGGTTGCACTCTaGGAGATGGTGGAGAGAACT +
Preference number: 5 (lower is better)
Translates to: FSYVYQASNYISRDSEHSGVVAL*EMVERT
Trigger: AGTTCTCTCCACCATCTCCAAGAGTGCAACCACGCC...TGAGTGCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR CAA 90 bp AATGAGCATCCATTGGGAAATCCTCCAAGTGCATTGGGCATTCAGCTTGAACTGTTTAGCCTCATCTTCTaGGATGTTAGCCAGCACCAA +
Preference number: 5 (lower is better)
Translates to: NEHPLGNPPSALGIQLELFSLIF*DVSQHQ
Trigger: TTGGTGCTGGCTAACATCCAAGAAGATGAGGCTAAA...CAGTTCAAGCTGAATGCCCAATGCACTTGGAGGATTTCCCAATGGATGCTCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000513005.5
ENST00000514193.5
ENST00000630416.2
CDS-3UTR CAA 90 bp TTGCACTCTTGGAGATGGTGGAGAGAACTGGATCTTTTGAAAGATTCGGGGCATTTTAGCCTCATCTTCTaGGATGTTAGCCAGCACCAA +
Preference number: 5 (lower is better)
Translates to: LHSWRWWRELDLLKDSGHFSLIF*DVSQHQ
Trigger: TTGGTGCTGGCTAACATCCAAGAAGATGAGGCTAAA...ATGCCCCGAATCTTTCAAAAGATCCAGTTCTCTCCACCATCTCCAAGAGTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000510233.5
ENST00000513005.5
ENST00000630416.2
CDS-3UTR CAA 90 bp AGCTGGCTTGTTTTCTGGCTTCTTGTTGGGTTCTGGCGTGGTTGCACTCTTGGATCTGGAGTCCAGATTTaGCTAGCCATTAAATTGTTT +
Preference number: 5 (lower is better)
Translates to: SWLVFWLLVGFWRGCTLGSGVQI*LAIKLF
Trigger: AAACAATTTAATGGCTAGCAAAATCTGGACTCCAGA...TCCAAGAGTGCAACCACGCCAGAACCCAACAAGAAGCCAGAAAACAAGCCAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000510233.5
ENST00000513005.5
ENST00000630416.2
CDS-3UTR CAA 90 bp GGTTCTGGCGTGGTTGCACTCTTGGAGATGGTGGAGAGAACTGGATCTTTTGAAAGAGAACTGGATCTTTaGAAAGATTCGGGGCATAAT +
Preference number: 5 (lower is better)
Translates to: GSGVVALLEMVERTGSFERELDL*KDSGHN
Trigger: ATTATGCCCCGAATCTTTCAAAAGATCCAGTTCTCT...TTCAAAAGATCCAGTTCTCTCCACCATCTCCAAGAGTGCAACCACGCCAGAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000510233.5
ENST00000513005.5
ENST00000630416.2
CDS-3UTR CAA 90 bp TGGGTCTCAATTCAAGGACTGACCCCTAATACAGGTTCTCTGTTTAAATATGTAGGCGTGGTTGCACTCTaGGAGATGGTGGAGAGAACT +
Preference number: 5 (lower is better)
Translates to: WVSIQGLTPNTGSLFKYVGVVAL*EMVERT
Trigger: AGTTCTCTCCACCATCTCCAAGAGTGCAACCACGCC...TACATATTTAAACAGAGAACCTGTATTAGGGGTCAGTCCTTGAATTGAGACCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000510233.5
ENST00000513005.5
ENST00000630416.2
CDS-3UTR CAA 90 bp TGGTATACAGCAGAGTCCCATCATCCTGAATTCGAAGCAACTTATTTGGCATTGTTTTCTGGCTTCTTGTaGGGTTCTGGCGTGGTTGCA +
Preference number: 5 (lower is better)
Translates to: WYTAESHHPEFEATYLALFSGFL*GSGVVA
Trigger: TGCAACCACGCCAGAACCCAACAAGAAGCCAGAAAA...CAATGCCAAATAAGTTGCTTCGAATTCAGGATGATGGGACTCTGCTGTATACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000513005.5
ENST00000630416.2
CDS-3UTR CAA 90 bp CATAATCAATTGACAAATGGTGAATTCTACATACTGTGCCAAGCACTAAGGACAAGGCTGTTGTGTTCCTaGCCATGTGGCCCCCTACCA +
Preference number: 5 (lower is better)
Translates to: HNQLTNGEFYILCQALRTRLLCS*PCGPLP
Trigger: TGGTAGGGGGCCACATGGCAAGGAACACAACAGCCT...TGTCCTTAGTGCTTGGCACAGTATGTAGAATTCACCATTTGTCAATTGATTATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS TCA 90 bp TATGCTCCACTCATTCCTTTATTTGTTCTGCCCATGGAGAGCATTTaGGTTTGGGTCCCTTTGTTCTGGCTCTTGAAGGCTATGTTACAC +
Preference number: 5 (lower is better)
Translates to: YAPLIPLFVLPMESI*VWVPLFWLLKAMLH
Trigger: GTGTAACATAGCCTTCAAGAGCCAGAACAAAGGGACCCAAACTCAAATGCTCTCCATGGGCAGAACAAATAAAGGAATGAGTGGAGCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR CAA 90 bp TGGTATACAGCAGAGTCCCATCATCCTGAATTCGAAGCAACTTATTTGGCATTGCATTGGGCATTCAGCTaGAACTGTAAGCCTCATGGT +
Preference number: 5 (lower is better)
Translates to: WYTAESHHPEFEATYLALHWAFS*NCKPHG
Trigger: ACCATGAGGCTTACAGTTCAAGCTGAATGCCCAATG...CAATGCCAAATAAGTTGCTTCGAATTCAGGATGATGGGACTCTGCTGTATACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000513005.5
ENST00000514193.5
ENST00000630416.2
CDS-3UTR CAA 90 bp TGGTATACAGCAGAGTCCCATCATCCTGAATTCGAAGCAACTTATTTGGCATTGAATCCTCCAAGTGCATaGGGCATTCAGCTTGAACTG +
Preference number: 5 (lower is better)
Translates to: WYTAESHHPEFEATYLALNPPSA*GIQLEL
Trigger: CAGTTCAAGCTGAATGCCCAATGCACTTGGAGGATT...CAATGCCAAATAAGTTGCTTCGAATTCAGGATGATGGGACTCTGCTGTATACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000513005.5
ENST00000514193.5
ENST00000630416.2
CDS-3UTR CAA 90 bp CTAGTTTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCTTGTCTCCTTTCCGATaGATTGGCCCAGCAGGTCAT +
Preference number: 5 (lower is better)
Translates to: LVFLMCTKLPITLAGTLSLSPFR*IGPAGH
Trigger: ATGACCTGCTGGGCCAATCAATCGGAAAGGAGACAA...GCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAAACTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR CAA 90 bp ACCCTTACCAAAACCTCTTCTGGTATACAAAGCTGTTGTAAATTTGAGTCAGCGTTGTCTCCTTTCCGATaGATTGGCCCAGCAGGTCAT +
Preference number: 5 (lower is better)
Translates to: TLTKTSSGIQSCCKFESALSPFR*IGPAGH
Trigger: ATGACCTGCTGGGCCAATCAATCGGAAAGGAGACAA...CGCTGACTCAAATTTACAACAGCTTTGTATACCAGAAGAGGTTTTGGTAAGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
CDS-3UTR CAA 90 bp AGTTTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCACTTGTCTCCTTTCCGATaGATTGGCCCAGCAGGTCAT +
Preference number: 5 (lower is better)
Translates to: SFSYVYQASNYISRDSEHLSPFR*IGPAGH
Trigger: ATGACCTGCTGGGCCAATCAATCGGAAAGGAGACAA...GTGCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR CAA 90 bp CGGGGCATAATTGGCAACAGCCACTGCATAAGCGTTGTTCTGTATCATAACGGATCATTGTTAGGACAGTaGTTACTCCAAACACAGTTC +
Preference number: 5 (lower is better)
Translates to: RGIIGNSHCISVVLYHNGSLLGQ*LLQTQF
Trigger: GAACTGTGTTTGGAGTAACAACTGTCCTAACAATGA...TCCGTTATGATACAGAACAACGCTTATGCAGTGGCTGTTGCCAATTATGCCCCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510233.5
ENST00000630416.2
CDS-3UTR CAA 90 bp AGGTTCCTCACATTCTCTCTGCATGTGATCGTATTATTAATTTGTAGCAAAGGAGGCGTGGTTGCACTCTaGGAGATGGTGGAGAGAACT +
Preference number: 5 (lower is better)
Translates to: RFLTFSLHVIVLLICSKGGVVAL*EMVERT
Trigger: AGTTCTCTCCACCATCTCCAAGAGTGCAACCACGCC...TCCTTTGCTACAAATTAATAATACGATCACATGCAGAGAGAATGTGAGGAACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381620.9
CDS-3UTR CAA 90 bp TGGCAAATTCCGTTAATAAGTTGCATTTGTGACCTTGGTTTTATACAAGCATGCGGCGTGGTTGCACTCTaGGAGATGGTGGAGAGAACT +
Preference number: 5 (lower is better)
Translates to: WQIPLISCICDLGFIQACGVVAL*EMVERT
Trigger: AGTTCTCTCCACCATCTCCAAGAGTGCAACCACGCC...GCATGCTTGTATAAAACCAAGGTCACAAATGCAACTTATTAACGGAATTTGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
CDS-3UTR CAA 90 bp ACTGGTAAGCTATGTCACTATATACATACTGTACATGTTGGATCACAAATTAGCTGGGTTCTGGCGTGGTaGCACTCTTGGAGATGGTGG +
Preference number: 5 (lower is better)
Translates to: TGKLCHYIHTVHVGSQISWVLAW*HSWRWW
Trigger: CCACCATCTCCAAGAGTGCAACCACGCCAGAACCCA...GCTAATTTGTGATCCAACATGTACAGTATGTATATAGTGACATAGCTTACCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR CAA 90 bp AGTTTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCACTTTTCTGGCTTCTTGTaGGGTTCTGGCGTGGTTGCA +
Preference number: 5 (lower is better)
Translates to: SFSYVYQASNYISRDSEHFSGFL*GSGVVA
Trigger: TGCAACCACGCCAGAACCCAACAAGAAGCCAGAAAA...GTGCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR CAA 90 bp TTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCACTCATTTTCTGGCTTCTTGTaGGGTTCTGGCGTGGTTGCA +
Preference number: 5 (lower is better)
Translates to: FSYVYQASNYISRDSEHSFSGFL*GSGVVA
Trigger: TGCAACCACGCCAGAACCCAACAAGAAGCCAGAAAA...TGAGTGCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR CAA 90 bp ACCCTTACCAAAACCTCTTCTGGTATACAAAGCTGTTGTAAATTTGAGTCAGCGTTTTCTGGCTTCTTGTaGGGTTCTGGCGTGGTTGCA +
Preference number: 5 (lower is better)
Translates to: TLTKTSSGIQSCCKFESAFSGFL*GSGVVA
Trigger: TGCAACCACGCCAGAACCCAACAAGAAGCCAGAAAA...CGCTGACTCAAATTTACAACAGCTTTGTATACCAGAAGAGGTTTTGGTAAGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
CDS-3UTR CAA 90 bp CTAGTTTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCAGGGTCCACAAAGGGTaGTACAGGATCCCCATTTTC +
Preference number: 5 (lower is better)
Translates to: LVFLMCTKLPITLAGTLSRVHKG*YRIPIF
Trigger: GAAAATGGGGATCCTGTACAACCCTTTGTGGACCCT...GCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAAACTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR CAA 90 bp GGCGTGGTTGCACTCTTGGAGATGGTGGAGAGAACTGGATCTTTTGAAAGATTCTCTGGAGTCCAGATTTaGCTAGCCATTAAATTGTTT +
Preference number: 5 (lower is better)
Translates to: GVVALLEMVERTGSFERFSGVQI*LAIKLF
Trigger: AAACAATTTAATGGCTAGCAAAATCTGGACTCCAGA...GAATCTTTCAAAAGATCCAGTTCTCTCCACCATCTCCAAGAGTGCAACCACGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000510233.5
ENST00000513005.5
ENST00000630416.2
CDS-3UTR CAA 90 bp CTCATCAGTGGGAGTTTTTGGCACAATTTTCTAATCCAATATGCATGTTGCTCCCATTGGGCATTCAGCTaGAACTGTAAGCCTCATGGT +
Preference number: 5 (lower is better)
Translates to: LISGSFWHNFLIQYACCSHWAFS*NCKPHG
Trigger: ACCATGAGGCTTACAGTTCAAGCTGAATGCCCAATG...GGAGCAACATGCATATTGGATTAGAAAATTGTGCCAAAAACTCCCACTGATGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
CDS-3UTR CAA 90 bp CTAGTTTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCCATTGGGCATTCAGCTaGAACTGTAAGCCTCATGGT +
Preference number: 5 (lower is better)
Translates to: LVFLMCTKLPITLAGTLSHWAFS*NCKPHG
Trigger: ACCATGAGGCTTACAGTTCAAGCTGAATGCCCAATG...GCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAAACTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR CAA 90 bp CTAGTTTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCAATCCTCCAAGTGCATaGGGCATTCAGCTTGAACTG +
Preference number: 5 (lower is better)
Translates to: LVFLMCTKLPITLAGTLSNPPSA*GIQLEL
Trigger: CAGTTCAAGCTGAATGCCCAATGCACTTGGAGGATT...GCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAAACTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR CAA 90 bp AAAGTACTTTGGTGCTCTTCTGGAATCCATGATTATATCATGGCAGGGTTTGTGAATCCTCCAAGTGCATaGGGCATTCAGCTTGAACTG +
Preference number: 5 (lower is better)
Translates to: KVLWCSSGIHDYIMAGFVNPPSA*GIQLEL
Trigger: CAGTTCAAGCTGAATGCCCAATGCACTTGGAGGATT...CACAAACCCTGCCATGATATAATCATGGATTCCAGAAGAGCACCAAAGTACTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381620.9
CDS-3UTR CAA 90 bp AGTTTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCACAATCCTCCAAGTGCATaGGGCATTCAGCTTGAACTG +
Preference number: 5 (lower is better)
Translates to: SFSYVYQASNYISRDSEHNPPSA*GIQLEL
Trigger: CAGTTCAAGCTGAATGCCCAATGCACTTGGAGGATT...GTGCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR CAA 90 bp ACCCTTACCAAAACCTCTTCTGGTATACAAAGCTGTTGTAAATTTGAGTCAGCGAATCCTCCAAGTGCATaGGGCATTCAGCTTGAACTG +
Preference number: 5 (lower is better)
Translates to: TLTKTSSGIQSCCKFESANPPSA*GIQLEL
Trigger: CAGTTCAAGCTGAATGCCCAATGCACTTGGAGGATT...CGCTGACTCAAATTTACAACAGCTTTGTATACCAGAAGAGGTTTTGGTAAGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
CDS-3UTR CAA 90 bp AAGCCTCCTCTTAGGCAGATACATAATCTACAGAGTATGAAAGGAAACAGCTGTAATCCTCCAAGTGCATaGGGCATTCAGCTTGAACTG +
Preference number: 5 (lower is better)
Translates to: KPPLRQIHNLQSMKGNSCNPPSA*GIQLEL
Trigger: CAGTTCAAGCTGAATGCCCAATGCACTTGGAGGATT...ACAGCTGTTTCCTTTCATACTCTGTAGATTATGTATCTGCCTAAGAGGAGGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515082.5
CDS-3UTR CAA 90 bp TTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCACTCAAATCCTCCAAGTGCATaGGGCATTCAGCTTGAACTG +
Preference number: 5 (lower is better)
Translates to: FSYVYQASNYISRDSEHSNPPSA*GIQLEL
Trigger: CAGTTCAAGCTGAATGCCCAATGCACTTGGAGGATT...TGAGTGCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR CAA 90 bp TTGCACTCTTGGAGATGGTGGAGAGAACTGGATCTTTTGAAAGATTCGGGGCATGCAAGGCAGATAGGTTaGAATCACAAAATACCCAAT +
Preference number: 5 (lower is better)
Translates to: LHSWRWWRELDLLKDSGHARQIG*NHKIPN
Trigger: ATTGGGTATTTTGTGATTCAAACCTATCTGCCTTGC...ATGCCCCGAATCTTTCAAAAGATCCAGTTCTCTCCACCATCTCCAAGAGTGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000510233.5
ENST00000630416.2
CDS-3UTR CAA 90 bp TGCTATCCGGGCTTTTACAATCAATCAGCAGAGACTGGAACAGGTGAAGAGGATTCATTGTTAGGACAGTaGTTACTCCAAACACAGTTC +
Preference number: 5 (lower is better)
Translates to: CYPGFYNQSAETGTGEEDSLLGQ*LLQTQF
Trigger: GAACTGTGTTTGGAGTAACAACTGTCCTAACAATGA...ATCCTCTTCACCTGTTCCAGTCTCTGCTGATTGATTGTAAAAGCCCGGATAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515082.5
CDS-3UTR CAA 90 bp CAAATGCATGTCTCCATTAAAGGTCTACTGGTAAGCTATGTCACTATATACATAGGCGTGGTTGCACTCTaGGAGATGGTGGAGAGAACT +
Preference number: 5 (lower is better)
Translates to: QMHVSIKGLLVSYVTIYIGVVAL*EMVERT
Trigger: AGTTCTCTCCACCATCTCCAAGAGTGCAACCACGCC...TATGTATATAGTGACATAGCTTACCAGTAGACCTTTAATGGAGACATGCATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR CAA 90 bp AATTCTCATCAGTGGGAGTTTTTGGCACAATTTTCTAATCCAATATGCATGTTGGGCGTGGTTGCACTCTaGGAGATGGTGGAGAGAACT +
Preference number: 5 (lower is better)
Translates to: NSHQWEFLAQFSNPICMLGVVAL*EMVERT
Trigger: AGTTCTCTCCACCATCTCCAAGAGTGCAACCACGCC...CAACATGCATATTGGATTAGAAAATTGTGCCAAAAACTCCCACTGATGAGAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
CDS-3UTR CAA 90 bp CGGGGCATAATTGGCAACAGCCACTGCATAAGCGTTGTTCTGTATCATAACGGAGAGAAAGCTATATACTaGGACCATATTAGCTTAGCT +
Preference number: 5 (lower is better)
Translates to: RGIIGNSHCISVVLYHNGEKAIY*DHISLA
Trigger: AGCTAAGCTAATATGGTCCAAGTATATAGCTTTCTC...TCCGTTATGATACAGAACAACGCTTATGCAGTGGCTGTTGCCAATTATGCCCCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630416.2
CDS-3UTR CAA 90 bp ACAAAGGGAAATGAAGCAGTTGTAACTCAATGCATCTGGAAAGAGGGTTCTTGCCCTTTGTTCTGGCTCTaGAAGGCTATGTTACACAGA +
Preference number: 5 (lower is better)
Translates to: TKGNEAVVTQCIWKEGSCPLFWL*KAMLHR
Trigger: TCTGTGTAACATAGCCTTCAAGAGCCAGAACAAAGG...GCAAGAACCCTCTTTCCAGATGCATTGAGTTACAACTGCTTCATTTCCCTTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR CAA 90 bp CTGATCTTTTCCAAAGTACACTATATTGTGTCTCATAAGATGTACATGGGTCAAGTGGGCAGAGGGACATaGTGTCACATCTGGGCAGAA +
Preference number: 5 (lower is better)
Translates to: LIFSKVHYIVSHKMYMGQVGRGT*CHIWAE
Trigger: TTCTGCCCAGATGTGACACAATGTCCCTCTGCCCAC...TTGACCCATGTACATCTTATGAGACACAATATAGTGTACTTTGGAAAAGATCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR CAA 90 bp GCGCACCATCCTTCCCCTTCCAGAGATACTTATCCAGATGCTAATGATTACACAGTGTCACCAAACAGTTaGTATAATCAGTCACTATGG +
Preference number: 5 (lower is better)
Translates to: AHHPSPSRDTYPDANDYTVSPNS*YNQSLW
Trigger: CCATAGTGACTGATTATACAAACTGTTTGGTGACAC...TGTGTAATCATTAGCATCTGGATAAGTATCTCTGGAAGGGGAAGGATGGTGCGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR CAA 90 bp GTTCTGGCGTGGTTGCACTCTTGGAGATGGTGGAGAGAACTGGATCTTTTGAAAGAAAGAAAACATCAATaGTATATTCCTCCCAGTCCT +
Preference number: 5 (lower is better)
Translates to: VLAWLHSWRWWRELDLLKERKHQ*YIPPSP
Trigger: AGGACTGGGAGGAATATACAATTGATGTTTTCTTTC...TTTCAAAAGATCCAGTTCTCTCCACCATCTCCAAGAGTGCAACCACGCCAGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000513005.5
ENST00000630416.2
CDS-3UTR CAA 90 bp CTAGTTTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCTGTAGATGTTCAATTTaGTCTTCATCACCGCCGCTC +
Preference number: 5 (lower is better)
Translates to: LVFLMCTKLPITLAGTLSCRCSI*SSSPPL
Trigger: GAGCGGCGGTGATGAAGACAAAATTGAACATCTACA...GCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAAACTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000540012.5
ENST00000630416.2
CDS-3UTR CAA 90 bp ACCCTTACCAAAACCTCTTCTGGTATACAAAGCTGTTGTAAATTTGAGTCAGCGTGTAGATGTTCAATTTaGTCTTCATCACCGCCGCTC +
Preference number: 5 (lower is better)
Translates to: TLTKTSSGIQSCCKFESACRCSI*SSSPPL
Trigger: GAGCGGCGGTGATGAAGACAAAATTGAACATCTACA...CGCTGACTCAAATTTACAACAGCTTTGTATACCAGAAGAGGTTTTGGTAAGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381620.9
CDS-3UTR CAA 90 bp TTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCACTCATTTAGCCTCATCTTCTaGGATGTTAGCCAGCACCAA +
Preference number: 5 (lower is better)
Translates to: FSYVYQASNYISRDSEHSFSLIF*DVSQHQ
Trigger: TTGGTGCTGGCTAACATCCAAGAAGATGAGGCTAAA...TGAGTGCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR CAA 90 bp AAGCCTCCTCTTAGGCAGATACATAATCTACAGAGTATGAAAGGAAACAGCTGTTTTAGCCTCATCTTCTaGGATGTTAGCCAGCACCAA +
Preference number: 5 (lower is better)
Translates to: KPPLRQIHNLQSMKGNSCFSLIF*DVSQHQ
Trigger: TTGGTGCTGGCTAACATCCAAGAAGATGAGGCTAAA...ACAGCTGTTTCCTTTCATACTCTGTAGATTATGTATCTGCCTAAGAGGAGGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515082.5
CDS-3UTR CAA 90 bp AGTTTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCACTTTAGCCTCATCTTCTaGGATGTTAGCCAGCACCAA +
Preference number: 5 (lower is better)
Translates to: SFSYVYQASNYISRDSEHFSLIF*DVSQHQ
Trigger: TTGGTGCTGGCTAACATCCAAGAAGATGAGGCTAAA...GTGCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR CAA 90 bp TCAACCCTTACCAAAACCTCTTCTGGTATACAAAGCTGTTGTAAATTTGAGTCATTGTCTCCTTTCCGATaGATTGGCCCAGCAGGTCAT +
Preference number: 5 (lower is better)
Translates to: STLTKTSSGIQSCCKFESLSPFR*IGPAGH
Trigger: ATGACCTGCTGGGCCAATCAATCGGAAAGGAGACAA...TGACTCAAATTTACAACAGCTTTGTATACCAGAAGAGGTTTTGGTAAGGGTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
CDS-3UTR CAA 90 bp TCAACCCTTACCAAAACCTCTTCTGGTATACAAAGCTGTTGTAAATTTGAGTCATTTTCTGGCTTCTTGTaGGGTTCTGGCGTGGTTGCA +
Preference number: 5 (lower is better)
Translates to: STLTKTSSGIQSCCKFESFSGFL*GSGVVA
Trigger: TGCAACCACGCCAGAACCCAACAAGAAGCCAGAAAA...TGACTCAAATTTACAACAGCTTTGTATACCAGAAGAGGTTTTGGTAAGGGTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
CDS-3UTR CAA 90 bp AAAGTACTTTGGTGCTCTTCTGGAATCCATGATTATATCATGGCAGGGTTTGTGTTACACAAGCCTCCGTaGAGAAACCTGGCATTCAAA +
Preference number: 5 (lower is better)
Translates to: KVLWCSSGIHDYIMAGFVLHKPP*RNLAFK
Trigger: TTTGAATGCCAGGTTTCTCAACGGAGGCTTGTGTAA...CACAAACCCTGCCATGATATAATCATGGATTCCAGAAGAGCACCAAAGTACTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381620.9
CDS-3UTR CAA 90 bp CATAATCAATTGACAAATGGTGAATTCTACATACTGTGCCAAGCACTAAGGACAGGAGAGCATTTGAGTTaGGGTCCCTTTGTTCTGGCT +
Preference number: 5 (lower is better)
Translates to: HNQLTNGEFYILCQALRTGEHLS*GPFVLA
Trigger: AGCCAGAACAAAGGGACCCAAACTCAAATGCTCTCC...TGTCCTTAGTGCTTGGCACAGTATGTAGAATTCACCATTTGTCAATTGATTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR CAA 90 bp CATAATCAATTGACAAATGGTGAATTCTACATACTGTGCCAAGCACTAAGGACAGCCCATGGAGAGCATTaGAGTTTGGGTCCCTTTGTT +
Preference number: 5 (lower is better)
Translates to: HNQLTNGEFYILCQALRTAHGEH*SLGPFV
Trigger: AACAAAGGGACCCAAACTCAAATGCTCTCCATGGGC...TGTCCTTAGTGCTTGGCACAGTATGTAGAATTCACCATTTGTCAATTGATTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR CAA 90 bp AGAACCTTGAAAACAGATGACTCAGTCCAGTGTTTGGACCATGTGCATCAGAATTGTATATGGTTTCCTTaGAACAATGGACTGTGGGCA +
Preference number: 5 (lower is better)
Translates to: RTLKTDDSVQCLDHVHQNCIWFP*NNGLWA
Trigger: TGCCCACAGTCCATTGTTCAAAGGAAACCATATACA...ATTCTGATGCACATGGTCCAAACACTGGACTGAGTCATCTGTTTTCAAGGTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR CAA 90 bp AATCTCCATTATGCTCCACTCATTCCTTTATTTGTTCTGCCCATGGAGAGCATTTTATTCCTGGGAGCTTaGGAAAAAGGGCATACAGCA +
Preference number: 5 (lower is better)
Translates to: NLHYAPLIPLFVLPMESILFLGA*EKGHTA
Trigger: TGCTGTATGCCCTTTTTCCAAAGCTCCCAGGAATAA...AATGCTCTCCATGGGCAGAACAAATAAAGGAATGAGTGGAGCATAATGGAGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR CAA 90 bp AATCTCCATTATGCTCCACTCATTCCTTTATTTGTTCTGCCCATGGAGAGCATTGAGAAGGATGACTCGTaGTTAGCAATGTCAGAAGTC +
Preference number: 5 (lower is better)
Translates to: NLHYAPLIPLFVLPMESIEKDDS*LAMSEV
Trigger: GACTTCTGACATTGCTAACAACGAGTCATCCTTCTC...AATGCTCTCCATGGGCAGAACAAATAAAGGAATGAGTGGAGCATAATGGAGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR CAA 90 bp ATGAATGAGCATCCATTGGGAAATCCTCCAAGTGCATTGGGCATTCAGCTTGAATCTGGAGTCCAGATTTaGCTAGCCATTAAATTGTTT +
Preference number: 5 (lower is better)
Translates to: MNEHPLGNPPSALGIQLESGVQI*LAIKLF
Trigger: AAACAATTTAATGGCTAGCAAAATCTGGACTCCAGA...TTCAAGCTGAATGCCCAATGCACTTGGAGGATTTCCCAATGGATGCTCATTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000513005.5
ENST00000514193.5
ENST00000630416.2
CDS-3UTR CAA 90 bp TCCCATCATCCTGAATTCGAAGCAACTTATTTGGCATTGTCATATTATGAGCTACATTGGGCATTCAGCTaGAACTGTAAGCCTCATGGT +
Preference number: 5 (lower is better)
Translates to: SHHPEFEATYLALSYYELHWAFS*NCKPHG
Trigger: ACCATGAGGCTTACAGTTCAAGCTGAATGCCCAATG...TAGCTCATAATATGACAATGCCAAATAAGTTGCTTCGAATTCAGGATGATGGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000513005.5
ENST00000514193.5
ENST00000630416.2
CDS-3UTR CAA 90 bp GTTAAAACCATGAACTTAACAGTCAGACAGGTAGATCGGAGTTCAAGTATACTTCATTGGGCATTCAGCTaGAACTGTAAGCCTCATGGT +
Preference number: 5 (lower is better)
Translates to: VKTMNLTVRQVDRSSSILHWAFS*NCKPHG
Trigger: ACCATGAGGCTTACAGTTCAAGCTGAATGCCCAATG...AAGTATACTTGAACTCCGATCTACCTGTCTGACTGTTAAGTTCATGGTTTTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515082.5
CDS-3UTR CAA 90 bp TTAATGGAAGTATTAGTACTACAAGAACTCCTAAAGGATTTCAGGCAAGAACACTTGTCTCCTTTCCGATaGATTGGCCCAGCAGGTCAT +
Preference number: 5 (lower is better)
Translates to: LMEVLVLQELLKDFRQEHLSPFR*IGPAGH
Trigger: ATGACCTGCTGGGCCAATCAATCGGAAAGGAGACAA...GTGTTCTTGCCTGAAATCCTTTAGGAGTTCTTGTAGTACTAATACTTCCATTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515082.5
CDS-3UTR CAA 90 bp ACTGGTAAGCTATGTCACTATATACATACTGTACATGTTGGATCACAAATTAGCTTTTCTGGCTTCTTGTaGGGTTCTGGCGTGGTTGCA +
Preference number: 5 (lower is better)
Translates to: TGKLCHYIHTVHVGSQISFSGFL*GSGVVA
Trigger: TGCAACCACGCCAGAACCCAACAAGAAGCCAGAAAA...GCTAATTTGTGATCCAACATGTACAGTATGTATATAGTGACATAGCTTACCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR CAA 90 bp CAAATGCATGTCTCCATTAAAGGTCTACTGGTAAGCTATGTCACTATATACATAAGGGTCCACAAAGGGTaGTACAGGATCCCCATTTTC +
Preference number: 5 (lower is better)
Translates to: QMHVSIKGLLVSYVTIYIRVHKG*YRIPIF
Trigger: GAAAATGGGGATCCTGTACAACCCTTTGTGGACCCT...TATGTATATAGTGACATAGCTTACCAGTAGACCTTTAATGGAGACATGCATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR CAA 90 bp CTCATCAGTGGGAGTTTTTGGCACAATTTTCTAATCCAATATGCATGTTGCTCCAATCCAATATGCATGTaGCTCCACAGCAACCAAACT +
Preference number: 5 (lower is better)
Translates to: LISGSFWHNFLIQYACCSNPICM*LHSNQT
Trigger: AGTTTGGTTGCTGTGGAGCAACATGCATATTGGATT...GGAGCAACATGCATATTGGATTAGAAAATTGTGCCAAAAACTCCCACTGATGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
CDS-3UTR CAA 90 bp TTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCACTCAAATCCAATATGCATGTaGCTCCACAGCAACCAAACT +
Preference number: 5 (lower is better)
Translates to: FSYVYQASNYISRDSEHSNPICM*LHSNQT
Trigger: AGTTTGGTTGCTGTGGAGCAACATGCATATTGGATT...TGAGTGCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
CDS-3UTR CAA 90 bp AGGTTCCTCACATTCTCTCTGCATGTGATCGTATTATTAATTTGTAGCAAAGGAATATCATGGCAGGGTTaGTGTCCCTCAACCAGGAAT +
Preference number: 5 (lower is better)
Translates to: RFLTFSLHVIVLLICSKGISWQG*CPSTRN
Trigger: ATTCCTGGTTGAGGGACACAAACCCTGCCATGATAT...TCCTTTGCTACAAATTAATAATACGATCACATGCAGAGAGAATGTGAGGAACCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381620.9
CDS-3UTR CAA 90 bp TCAACCCTTACCAAAACCTCTTCTGGTATACAAAGCTGTTGTAAATTTGAGTCAAAGCTAATTCAGCAATaGCAATCCCACCGGTGGCAT +
Preference number: 5 (lower is better)
Translates to: STLTKTSSGIQSCCKFESKLIQQ*QSHRWH
Trigger: ATGCCACCGGTGGGATTGCAATTGCTGAATTAGCTT...TGACTCAAATTTACAACAGCTTTGTATACCAGAAGAGGTTTTGGTAAGGGTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381620.9
CDS-3UTR CAA 90 bp CTCATCAGTGGGAGTTTTTGGCACAATTTTCTAATCCAATATGCATGTTGCTCCTGTAGATGTTCAATTTaGTCTTCATCACCGCCGCTT +
Preference number: 5 (lower is better)
Translates to: LISGSFWHNFLIQYACCSCRCSI*SSSPPL
Trigger: AAGCGGCGGTGATGAAGACAAAATTGAACATCTACA...GGAGCAACATGCATATTGGATTAGAAAATTGTGCCAAAAACTCCCACTGATGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514090.5
CDS-3UTR CAA 90 bp ACAAAGGGAAATGAAGCAGTTGTAACTCAATGCATCTGGAAAGAGGGTTCTTGCTTACTGTCACGGAGGTaGAAATTTCAGACTAACACT +
Preference number: 5 (lower is better)
Translates to: TKGNEAVVTQCIWKEGSCLLSRR*KFQTNT
Trigger: AGTGTTAGTCTGAAATTTCAACCTCCGTGACAGTAA...GCAAGAACCCTCTTTCCAGATGCATTGAGTTACAACTGCTTCATTTCCCTTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR CAA 90 bp GTTTTTCAAGCTCCAAAGCCTGATCTTTTCCAAAGTACACTATATTGTGTCTCAGAAGCCATAGAGCCTTaGTTCATGATCACTGCTCAG +
Preference number: 5 (lower is better)
Translates to: VFQAPKPDLFQSTLYCVSEAIEP*FMITAQ
Trigger: CTGAGCAGTGATCATGAACAAAGGCTCTATGGCTTC...TGAGACACAATATAGTGTACTTTGGAAAAGATCAGGCTTTGGAGCTTGAAAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR CAA 90 bp GCTACTGAATTTAAGGTTCAGCAGACCAATTTAACCCATCTATCAATCAACATTAAGGCACATGGGAAGTaGGCCACTAATGAACACCCA +
Preference number: 5 (lower is better)
Translates to: ATEFKVQQTNLTHLSINIKAHGK*ATNEHP
Trigger: TGGGTGTTCATTAGTGGCCAACTTCCCATGTGCCTT...AATGTTGATTGATAGATGGGTTAAATTGGTCTGCTGAACCTTAAATTCAGTAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR CAA 90 bp ACCCTTACCAAAACCTCTTCTGGTATACAAAGCTGTTGTAAATTTGAGTCAGCGCATCACCGCCGCTTTTaGCAATTACTCTACATTACA +
Preference number: 5 (lower is better)
Translates to: TLTKTSSGIQSCCKFESAHHRRF*QLLYIT
Trigger: TGTAATGTAGAGTAATTGCAAAAAGCGGCGGTGATG...CGCTGACTCAAATTTACAACAGCTTTGTATACCAGAAGAGGTTTTGGTAAGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514090.5
CDS-3UTR CAA 90 bp CTAGTTTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCTCAGCAAACACTGTTTaGCGCACACGTAATAATAAC +
Preference number: 5 (lower is better)
Translates to: LVFLMCTKLPITLAGTLSSANTV*RTRNNN
Trigger: GTTATTATTACGTGTGCGCAAAACAGTGTTTGCTGA...GCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAAACTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356504.5
CDS-3UTR CAA 90 bp TCCCATCATCCTGAATTCGAAGCAACTTATTTGGCATTGTCATATTATGAGCTATGTAGATGTTCAATTTaGTCTTCATCACCGCCGCTC +
Preference number: 5 (lower is better)
Translates to: SHHPEFEATYLALSYYELCRCSI*SSSPPL
Trigger: GAGCGGCGGTGATGAAGACAAAATTGAACATCTACA...TAGCTCATAATATGACAATGCCAAATAAGTTGCTTCGAATTCAGGATGATGGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514193.5
ENST00000630416.2
CDS-3UTR CAA 90 bp TGTTCAACCCTTACCAAAACCTCTTCTGGTATACAAAGCTGTTGTAAATTTGAGTTTAGCCTCATCTTCTaGGATGTTAGCCAGCACCAA +
Preference number: 5 (lower is better)
Translates to: CSTLTKTSSGIQSCCKFEFSLIF*DVSQHQ
Trigger: TTGGTGCTGGCTAACATCCAAGAAGATGAGGCTAAA...CTCAAATTTACAACAGCTTTGTATACCAGAAGAGGTTTTGGTAAGGGTTGAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
CDS-3UTR CAA 90 bp CATAATCAATTGACAAATGGTGAATTCTACATACTGTGCCAAGCACTAAGGACATTTAGCCTCATCTTCTaGGATGTTAGCCAGCACCAA +
Preference number: 5 (lower is better)
Translates to: HNQLTNGEFYILCQALRTFSLIF*DVSQHQ
Trigger: TTGGTGCTGGCTAACATCCAAGAAGATGAGGCTAAA...TGTCCTTAGTGCTTGGCACAGTATGTAGAATTCACCATTTGTCAATTGATTATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR CAA 90 bp TGGTATACAGCAGAGTCCCATCATCCTGAATTCGAAGCAACTTATTTGGCATTGTCTGGAGTCCAGATTTaGCTAGCCATTAAATTGTTT +
Preference number: 5 (lower is better)
Translates to: WYTAESHHPEFEATYLALSGVQI*LAIKLF
Trigger: AAACAATTTAATGGCTAGCAAAATCTGGACTCCAGA...CAATGCCAAATAAGTTGCTTCGAATTCAGGATGATGGGACTCTGCTGTATACCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000513005.5
ENST00000514193.5
ENST00000630416.2
CDS-3UTR CAA 90 bp CAAATGCATGTCTCCATTAAAGGTCTACTGGTAAGCTATGTCACTATATACATACATTGGGCATTCAGCTaGAACTGTAAGCCTCATGGT +
Preference number: 5 (lower is better)
Translates to: QMHVSIKGLLVSYVTIYIHWAFS*NCKPHG
Trigger: ACCATGAGGCTTACAGTTCAAGCTGAATGCCCAATG...TATGTATATAGTGACATAGCTTACCAGTAGACCTTTAATGGAGACATGCATTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR CAA 90 bp AATTCTCATCAGTGGGAGTTTTTGGCACAATTTTCTAATCCAATATGCATGTTGCATTGGGCATTCAGCTaGAACTGTAAGCCTCATGGT +
Preference number: 5 (lower is better)
Translates to: NSHQWEFLAQFSNPICMLHWAFS*NCKPHG
Trigger: ACCATGAGGCTTACAGTTCAAGCTGAATGCCCAATG...CAACATGCATATTGGATTAGAAAATTGTGCCAAAAACTCCCACTGATGAGAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
CDS-3UTR CAA 90 bp ACTGGTAAGCTATGTCACTATATACATACTGTACATGTTGGATCACAAATTAGCCATTGGGCATTCAGCTaGAACTGTAAGCCTCATGGT +
Preference number: 5 (lower is better)
Translates to: TGKLCHYIHTVHVGSQISHWAFS*NCKPHG
Trigger: ACCATGAGGCTTACAGTTCAAGCTGAATGCCCAATG...GCTAATTTGTGATCCAACATGTACAGTATGTATATAGTGACATAGCTTACCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR CAA 90 bp ACTGGTAAGCTATGTCACTATATACATACTGTACATGTTGGATCACAAATTAGCAATCCTCCAAGTGCATaGGGCATTCAGCTTGAACTG +
Preference number: 5 (lower is better)
Translates to: TGKLCHYIHTVHVGSQISNPPSA*GIQLEL
Trigger: CAGTTCAAGCTGAATGCCCAATGCACTTGGAGGATT...GCTAATTTGTGATCCAACATGTACAGTATGTATATAGTGACATAGCTTACCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR CAA 90 bp CTAGTTTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCGCAAGGCAGATAGGTTaGAATCACAAAATACCCAAT +
Preference number: 5 (lower is better)
Translates to: LVFLMCTKLPITLAGTLSARQIG*NHKIPN
Trigger: ATTGGGTATTTTGTGATTCAAACCTATCTGCCTTGC...GCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAAACTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR CAA 90 bp AAACAATACTCCCCGCCCCACCTACTACAAATAATTAGTTTGAGGATCAAGAGAGCAAGGCAGATAGGTTaGAATCACAAAATACCCAAT +
Preference number: 5 (lower is better)
Translates to: KQYSPPHLLQIISLRIKRARQIG*NHKIPN
Trigger: ATTGGGTATTTTGTGATTCAAACCTATCTGCCTTGC...TCTCTTGATCCTCAAACTAATTATTTGTAGTAGGTGGGGCGGGGAGTATTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000514236.1
CDS-3UTR CAA 90 bp AGTTTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCACGCAAGGCAGATAGGTTaGAATCACAAAATACCCAAT +
Preference number: 5 (lower is better)
Translates to: SFSYVYQASNYISRDSEHARQIG*NHKIPN
Trigger: ATTGGGTATTTTGTGATTCAAACCTATCTGCCTTGC...GTGCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAAACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR CAA 90 bp TTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCACTCATCATTGTTAGGACAGTaGTTACTCCAAACACAGTTC +
Preference number: 5 (lower is better)
Translates to: FSYVYQASNYISRDSEHSSLLGQ*LLQTQF
Trigger: GAACTGTGTTTGGAGTAACAACTGTCCTAACAATGA...TGAGTGCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR CAA 90 bp CTAGTTTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCTCATTGTTAGGACAGTaGTTACTCCAAACACAGTTC +
Preference number: 5 (lower is better)
Translates to: LVFLMCTKLPITLAGTLSSLLGQ*LLQTQF
Trigger: GAACTGTGTTTGGAGTAACAACTGTCCTAACAATGA...GCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAAACTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR CAA 90 bp CTCATCAGTGGGAGTTTTTGGCACAATTTTCTAATCCAATATGCATGTTGCTCCAGAGAACTGGATCTTTaGAAAGATTCGGGGCATAAT +
Preference number: 5 (lower is better)
Translates to: LISGSFWHNFLIQYACCSRELDL*KDSGHN
Trigger: ATTATGCCCCGAATCTTTCAAAAGATCCAGTTCTCT...GGAGCAACATGCATATTGGATTAGAAAATTGTGCCAAAAACTCCCACTGATGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
CDS-3UTR CAA 90 bp CTAGTTTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCAGAGAACTGGATCTTTaGAAAGATTCGGGGCATAAT +
Preference number: 5 (lower is better)
Translates to: LVFLMCTKLPITLAGTLSRELDL*KDSGHN
Trigger: ATTATGCCCCGAATCTTTCAAAAGATCCAGTTCTCT...GCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAAACTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR CAA 90 bp CTAGTTTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCCATCAGTGGGAGTTTTaGGCACAATTTTCTAATCCA +
Preference number: 5 (lower is better)
Translates to: LVFLMCTKLPITLAGTLSHQWEF*AQFSNP
Trigger: TGGATTAGAAAATTGTGCCAAAAACTCCCACTGATG...GCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAAACTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
CDS-3UTR CAA 90 bp TTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCACTCAGTTGCATTTGTGACCTaGGTTTTATACAAGCATGCA +
Preference number: 5 (lower is better)
Translates to: FSYVYQASNYISRDSEHSVAFVT*VLYKHA
Trigger: TGCATGCTTGTATAAAACCAAGGTCACAAATGCAAC...TGAGTGCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
CDS-3UTR CAA 90 bp ACCCTTACCAAAACCTCTTCTGGTATACAAAGCTGTTGTAAATTTGAGTCAGCGGTTGCATTTGTGACCTaGGTTTTATACAAGCATGCA +
Preference number: 5 (lower is better)
Translates to: TLTKTSSGIQSCCKFESAVAFVT*VLYKHA
Trigger: TGCATGCTTGTATAAAACCAAGGTCACAAATGCAAC...CGCTGACTCAAATTTACAACAGCTTTGTATACCAGAAGAGGTTTTGGTAAGGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
CDS-3UTR CAA 90 bp CTCATCAGTGGGAGTTTTTGGCACAATTTTCTAATCCAATATGCATGTTGCTCCTCACAAAAACGGGTATaGCTTACTGTACAGTACAGT +
Preference number: 5 (lower is better)
Translates to: LISGSFWHNFLIQYACCSSQKRV*LTVQYS
Trigger: ACTGTACTGTACAGTAAGCAATACCCGTTTTTGTGA...GGAGCAACATGCATATTGGATTAGAAAATTGTGCCAAAAACTCCCACTGATGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000381620.9
CDS-3UTR CAA 90 bp CTAGTTTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCTGCCTTCAGCTTTTATaGAAGGGGACTTGTCATTTA +
Preference number: 5 (lower is better)
Translates to: LVFLMCTKLPITLAGTLSCLQLL*KGTCHL
Trigger: TAAATGACAAGTCCCCTTCAATAAAAGCTGAAGGCA...GCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAAACTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000540012.5
ENST00000630416.2
CDS-3UTR CAA 90 bp AGATGGCATGTTATCATCTTCATGAAGTATCTATTCCTACCTAATAAAGGGGCACACTCATTCCTTTATTaGTTCTGCCCATGGAGAGCA +
Preference number: 5 (lower is better)
Translates to: RWHVIIFMKYLFLPNKGAHSFLY*FCPWRA
Trigger: TGCTCTCCATGGGCAGAACAAATAAAGGAATGAGTG...TGCCCCTTTATTAGGTAGGAATAGATACTTCATGAAGATGATAACATGCCATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR CAA 90 bp AATCTCCATTATGCTCCACTCATTCCTTTATTTGTTCTGCCCATGGAGAGCATTGTAAGATCCCAAGCCTaGGAATCAAAGAGATCTAAA +
Preference number: 5 (lower is better)
Translates to: NLHYAPLIPLFVLPMESIVRSQA*ESKRSK
Trigger: TTTAGATCTCTTTGATTCCAAGGCTTGGGATCTTAC...AATGCTCTCCATGGGCAGAACAAATAAAGGAATGAGTGGAGCATAATGGAGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR CAA 90 bp CATGGTATACAGCAGAGTCCCATCATCCTGAATTCGAAGCAACTTATTTGGCATGAAAGAAAACATCAATaGTATATTCCTCCCAGTCCT +
Preference number: 5 (lower is better)
Translates to: HGIQQSPIILNSKQLIWHERKHQ*YIPPSP
Trigger: AGGACTGGGAGGAATATACAATTGATGTTTTCTTTC...ATGCCAAATAAGTTGCTTCGAATTCAGGATGATGGGACTCTGCTGTATACCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000513005.5
ENST00000514193.5
ENST00000630416.2
CDS-3UTR CAA 90 bp TGGTATACAGCAGAGTCCCATCATCCTGAATTCGAAGCAACTTATTTGGCATTGGAAAGAAAACATCAATaGTATATTCCTCCCAGTCCT +
Preference number: 5 (lower is better)
Translates to: WYTAESHHPEFEATYLALERKHQ*YIPPSP
Trigger: AGGACTGGGAGGAATATACAATTGATGTTTTCTTTC...CAATGCCAAATAAGTTGCTTCGAATTCAGGATGATGGGACTCTGCTGTATACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000513005.5
ENST00000514193.5
ENST00000630416.2
CDS-3UTR CAA 90 bp ACTGGTAAGCTATGTCACTATATACATACTGTACATGTTGGATCACAAATTAGCGCAGGCAGCCCACTTTaGCAATTACTCTACATTACA +
Preference number: 5 (lower is better)
Translates to: TGKLCHYIHTVHVGSQISAGSPL*QLLYIT
Trigger: TGTAATGTAGAGTAATTGCAAAAGTGGGCTGCCTGC...GCTAATTTGTGATCCAACATGTACAGTATGTATATAGTGACATAGCTTACCAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356504.5
CDS-3UTR CAA 90 bp ACTGGTAAGCTATGTCACTATATACATACTGTACATGTTGGATCACAAATTAGCTTTAGCCTCATCTTCTaGGATGTTAGCCAGCACCAA +
Preference number: 5 (lower is better)
Translates to: TGKLCHYIHTVHVGSQISFSLIF*DVSQHQ
Trigger: TTGGTGCTGGCTAACATCCAAGAAGATGAGGCTAAA...GCTAATTTGTGATCCAACATGTACAGTATGTATATAGTGACATAGCTTACCAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR CAA 90 bp AGTTTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCACTCTGGAGTCCAGATTTaGCTAGCCATTAAATTGTTT +
Preference number: 5 (lower is better)
Translates to: SFSYVYQASNYISRDSEHSGVQI*LAIKLF
Trigger: AAACAATTTAATGGCTAGCAAAATCTGGACTCCAGA...GTGCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAAACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR CAA 90 bp CTCATCAGTGGGAGTTTTTGGCACAATTTTCTAATCCAATATGCATGTTGCTCCTCTGGAGTCCAGATTTaGCTAGCCATTAAATTGTTT +
Preference number: 5 (lower is better)
Translates to: LISGSFWHNFLIQYACCSSGVQI*LAIKLF
Trigger: AAACAATTTAATGGCTAGCAAAATCTGGACTCCAGA...GGAGCAACATGCATATTGGATTAGAAAATTGTGCCAAAAACTCCCACTGATGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
CDS-3UTR CAA 90 bp AGGTTCCTCACATTCTCTCTGCATGTGATCGTATTATTAATTTGTAGCAAAGGAGCTTGCCTTCTGGCATaGTGTACTTCCTTATACAAT +
Preference number: 5 (lower is better)
Translates to: RFLTFSLHVIVLLICSKGACLLA*CTSLYN
Trigger: ATTGTATAAGGAAGTACACAATGCCAGAAGGCAAGC...TCCTTTGCTACAAATTAATAATACGATCACATGCAGAGAGAATGTGAGGAACCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381620.9
CDS-3UTR CAA 90 bp AGTTTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCACTTTATTGAAGGGGACTaGTCATTTACTACACTCTTC +
Preference number: 5 (lower is better)
Translates to: SFSYVYQASNYISRDSEHFIEGD*SFTTLF
Trigger: GAAGAGTGTAGTAAATGACAAGTCCCCTTCAATAAA...GTGCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAAACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000540012.5
ENST00000630416.2
CDS-3UTR CAA 90 bp TTTTCTTATGTGTACCAAGCTTCCAATTACATTAGCAGGGACTCTGAGCACTCAGAGAAAGCTATATACTaGGACCATATTAGCTTAGCT +
Preference number: 5 (lower is better)
Translates to: FSYVYQASNYISRDSEHSEKAIY*DHISLA
Trigger: AGCTAAGCTAATATGGTCCAAGTATATAGCTTTCTC...TGAGTGCTCAGAGTCCCTGCTAATGTAATTGGAAGCTTGGTACACATAAGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540012.5
ENST00000630416.2
CDS-3UTR CAA 90 bp AGATGGCATGTTATCATCTTCATGAAGTATCTATTCCTACCTAATAAAGGGGCATGTAGATGTTCAATTTaGTCTTCATCACCGCCGCTA +
Preference number: 5 (lower is better)
Translates to: RWHVIIFMKYLFLPNKGACRCSI*SSSPPL
Trigger: TAGCGGCGGTGATGAAGACAAAATTGAACATCTACA...TGCCCCTTTATTAGGTAGGAATAGATACTTCATGAAGATGATAACATGCCATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR CAA 90 bp TGGCAAATTCCGTTAATAAGTTGCATTTGTGACCTTGGTTTTATACAAGCATGCTGTAGATGTTCAATTTaGTCTTCATCACCGCCGCTA +
Preference number: 5 (lower is better)
Translates to: WQIPLISCICDLGFIQACCRCSI*SSSPPL
Trigger: TAGCGGCGGTGATGAAGACAAAATTGAACATCTACA...GCATGCTTGTATAAAACCAAGGTCACAAATGCAACTTATTAACGGAATTTGCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510861.5
CDS-3UTR CAA 90 bp AATCTCCATTATGCTCCACTCATTCCTTTATTTGTTCTGCCCATGGAGAGCATTTCAAGTGTGATTTGTTaGGGAAGCACAGATTTTGTT +
Preference number: 5 (lower is better)
Translates to: NLHYAPLIPLFVLPMESISSVIC*GSTDFV
Trigger: AACAAAATCTGTGCTTCCCAAACAAATCACACTTGA...AATGCTCTCCATGGGCAGAACAAATAAAGGAATGAGTGGAGCATAATGGAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR CAA 90 bp GCTACTGAATTTAAGGTTCAGCAGACCAATTTAACCCATCTATCAATCAACATTACTATGGAAGATGACTaGCACCCTGAGAAATGGGTT +
Preference number: 5 (lower is better)
Translates to: ATEFKVQQTNLTHLSINITMEDD*HPEKWV
Trigger: AACCCATTTCTCAGGGTGCAAGTCATCTTCCATAGT...AATGTTGATTGATAGATGGGTTAAATTGGTCTGCTGAACCTTAAATTCAGTAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR CAA 90 bp TGGGTCTCAATTCAAGGACTGACCCCTAATACAGGTTCTCTGTTTAAATATGTATCATTGTTAGGACAGTaGTTACTCAGCTGCCAAATT +
Preference number: 5 (lower is better)
Translates to: WVSIQGLTPNTGSLFKYVSLLGQ*LLSCQI
Trigger: AATTTGGCAGCTGAGTAACAACTGTCCTAACAATGA...TACATATTTAAACAGAGAACCTGTATTAGGGGTCAGTCCTTGAATTGAGACCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513005.5
CDS-3UTR CAA 90 bp TGGCAAATTCCGTTAATAAGTTGCATTTGTGACCTTGGTTTTATACAAGCATGCACCCAACACAAAAGGTaGCCAAGATACTGTGCTTTT +
Preference number: 5 (lower is better)
Translates to: WQIPLISCICDLGFIQACTQHKR*PRYCAF
Trigger: AAAAGCACAGTATCTTGGCAACCTTTTGTGTTGGGT...GCATGCTTGTATAAAACCAAGGTCACAAATGCAACTTATTAACGGAATTTGCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510861.5
CDS-3UTR CAA 90 bp TGGCAAATTCCGTTAATAAGTTGCATTTGTGACCTTGGTTTTATACAAGCATGCGCAAGGCAGATAGGTTaGAATCACAAAATACCCAAT +
Preference number: 5 (lower is better)
Translates to: WQIPLISCICDLGFIQACARQIG*NHKIPN
Trigger: ATTGGGTATTTTGTGATTCAAACCTATCTGCCTTGC...GCATGCTTGTATAAAACCAAGGTCACAAATGCAACTTATTAACGGAATTTGCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
CDS-3UTR CAA 90 bp TCAACCCTTACCAAAACCTCTTCTGGTATACAAAGCTGTTGTAAATTTGAGTCAGCAAGGCAGATAGGTTaGAATCACAAAATACCCAAT +
Preference number: 5 (lower is better)
Translates to: STLTKTSSGIQSCCKFESARQIG*NHKIPN
Trigger: ATTGGGTATTTTGTGATTCAAACCTATCTGCCTTGC...TGACTCAAATTTACAACAGCTTTGTATACCAGAAGAGGTTTTGGTAAGGGTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
CDS-3UTR CAA 90 bp TCCCATCATCCTGAATTCGAAGCAACTTATTTGGCATTGTCATATTATGAGCTATCATTGTTAGGACAGTaGTTACTCCAAACACAGTTC +
Preference number: 5 (lower is better)
Translates to: SHHPEFEATYLALSYYELSLLGQ*LLQTQF
Trigger: GAACTGTGTTTGGAGTAACAACTGTCCTAACAATGA...TAGCTCATAATATGACAATGCCAAATAAGTTGCTTCGAATTCAGGATGATGGGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630416.2
CDS-3UTR CAA 90 bp TGTTCAACCCTTACCAAAACCTCTTCTGGTATACAAAGCTGTTGTAAATTTGAGAGAGAACTGGATCTTTaGAAAGATTCGGGGCATAAT +
Preference number: 5 (lower is better)
Translates to: CSTLTKTSSGIQSCCKFERELDL*KDSGHN
Trigger: ATTATGCCCCGAATCTTTCAAAAGATCCAGTTCTCT...CTCAAATTTACAACAGCTTTGTATACCAGAAGAGGTTTTGGTAAGGGTTGAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
CDS-3UTR CAA 90 bp TCAACCCTTACCAAAACCTCTTCTGGTATACAAAGCTGTTGTAAATTTGAGTCAAGAGAACTGGATCTTTaGAAAGATTCGGGGCATAAT +
Preference number: 5 (lower is better)
Translates to: STLTKTSSGIQSCCKFESRELDL*KDSGHN
Trigger: ATTATGCCCCGAATCTTTCAAAAGATCCAGTTCTCT...TGACTCAAATTTACAACAGCTTTGTATACCAGAAGAGGTTTTGGTAAGGGTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
CDS-3UTR CAA 90 bp ACTGGTAAGCTATGTCACTATATACATACTGTACATGTTGGATCACAAATTAGCAATCCAATATGCATGTaGCTCCACAGCAACCAAACT +
Preference number: 5 (lower is better)
Translates to: TGKLCHYIHTVHVGSQISNPICM*LHSNQT
Trigger: AGTTTGGTTGCTGTGGAGCAACATGCATATTGGATT...GCTAATTTGTGATCCAACATGTACAGTATGTATATAGTGACATAGCTTACCAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
CDS-3UTR CAA 90 bp TGTTCAACCCTTACCAAAACCTCTTCTGGTATACAAAGCTGTTGTAAATTTGAGCATCAGTGGGAGTTTTaGGCACAATTTTCTAATCCA +
Preference number: 5 (lower is better)
Translates to: CSTLTKTSSGIQSCCKFEHQWEF*AQFSNP
Trigger: TGGATTAGAAAATTGTGCCAAAAACTCCCACTGATG...CTCAAATTTACAACAGCTTTGTATACCAGAAGAGGTTTTGGTAAGGGTTGAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
CDS-3UTR CAA 90 bp GAACTGCTTTCACAAGAGAAAAATGTGCCAATTAACTGCCCTTTCCTTTATAATCCAAAGAAAAGTACTTaGGTGCTCTTCTGGAATCCA +
Preference number: 5 (lower is better)
Translates to: ELLSQEKNVPINCPFLYNPKKST*VLFWNP
Trigger: TGGATTCCAGAAGAGCACCAAAGTACTTTTCTTTGG...ATTATAAAGGAAAGGGCAGTTAATTGGCACATTTTTCTCTTGTGAAAGCAGTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381620.9
CDS-3UTR CAA 90 bp AGGTTCCTCACATTCTCTCTGCATGTGATCGTATTATTAATTTGTAGCAAAGGACCAATGCAACATAGTTaGCCTTTTGGCATCATGTTA +
Preference number: 5 (lower is better)
Translates to: RFLTFSLHVIVLLICSKGPMQHS*PFGIML
Trigger: TAACATGATGCCAAAAGGCAAACTATGTTGCATTGG...TCCTTTGCTACAAATTAATAATACGATCACATGCAGAGAGAATGTGAGGAACCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381620.9
CDS-3UTR CAA 90 bp TGGGTCTCAATTCAAGGACTGACCCCTAATACAGGTTCTCTGTTTAAATATGTATTTATTGAAGGGGACTaGTCATTTACTACACTCTTC +
Preference number: 5 (lower is better)
Translates to: WVSIQGLTPNTGSLFKYVFIEGD*SFTTLF
Trigger: GAAGAGTGTAGTAAATGACAAGTCCCCTTCAATAAA...TACATATTTAAACAGAGAACCTGTATTAGGGGTCAGTCCTTGAATTGAGACCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630416.2
CDS-3UTR CAA 90 bp TTTCTTGGAATAAACTGGGCCATGAGAAAGCTATATACTTGGACCATATTAGCTTGCCTTCAGCTTTTATaGAAGGGGACTTGTCATTTA +
Preference number: 5 (lower is better)
Translates to: FLGINWAMRKLYTWTILACLQLL*KGTCHL
Trigger: TAAATGACAAGTCCCCTTCAATAAAAGCTGAAGGCA...AGCTAATATGGTCCAAGTATATAGCTTTCTCATGGCCCAGTTTATTCCAAGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630416.2
CDS-3UTR CAA 90 bp CTGATCTTTTCCAAAGTACACTATATTGTGTCTCATAAGATGTACATGGGTCAACCTCTCTTTGAGGTTTaGAGGAAAATGCTAGCTAGA +
Preference number: 5 (lower is better)
Translates to: LIFSKVHYIVSHKMYMGQPLFEV*RKMLAR
Trigger: TCTAGCTAGCATTTTCCTCAAAACCTCAAAGAGAGG...TTGACCCATGTACATCTTATGAGACACAATATAGTGTACTTTGGAAAAGATCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR CAA 90 bp CATAATCAATTGACAAATGGTGAATTCTACATACTGTGCCAAGCACTAAGGACAAGAAATGGGTTCTACTaGCCAAGTGTGGTAGTTATT +
Preference number: 5 (lower is better)
Translates to: HNQLTNGEFYILCQALRTRNGFY*PSVVVI
Trigger: AATAACTACCACACTTGGCAAGTAGAACCCATTTCT...TGTCCTTAGTGCTTGGCACAGTATGTAGAATTCACCATTTGTCAATTGATTATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR CAA 90 bp CATAATCAATTGACAAATGGTGAATTCTACATACTGTGCCAAGCACTAAGGACATCATTGATACCACCTTaGTTTGATTTGAGGGTGCTT +
Preference number: 5 (lower is better)
Translates to: HNQLTNGEFYILCQALRTSLIPP*FDLRVL
Trigger: AAGCACCCTCAAATCAAACAAAGGTGGTATCAATGA...TGTCCTTAGTGCTTGGCACAGTATGTAGAATTCACCATTTGTCAATTGATTATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS-3UTR CAA 90 bp TGTTCAACCCTTACCAAAACCTCTTCTGGTATACAAAGCTGTTGTAAATTTGAGTCTGGAGTCCAGATTTaGCTAGCCATTAAATTGTTT +
Preference number: 5 (lower is better)
Translates to: CSTLTKTSSGIQSCCKFESGVQI*LAIKLF
Trigger: AAACAATTTAATGGCTAGCAAAATCTGGACTCCAGA...CTCAAATTTACAACAGCTTTGTATACCAGAAGAGGTTTTGGTAAGGGTTGAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
CDS-3UTR CAA 90 bp GTTAAAACCATGAACTTAACAGTCAGACAGGTAGATCGGAGTTCAAGTATACTTTCTGGAGTCCAGATTTaGCTAGCCATTAAATTGTTT +
Preference number: 5 (lower is better)
Translates to: VKTMNLTVRQVDRSSSILSGVQI*LAIKLF
Trigger: AAACAATTTAATGGCTAGCAAAATCTGGACTCCAGA...AAGTATACTTGAACTCCGATCTACCTGTCTGACTGTTAAGTTCATGGTTTTAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515082.5
CDS-3UTR CAA 90 bp AGTGGTTTTAATGGAAGTATTAGTACTACAAGAACTCCTAAAGGATTTCAGGCAGCAAGGCAGATAGGTTaGAATCACAAAATACCCAAT +
Preference number: 5 (lower is better)
Translates to: SGFNGSISTTRTPKGFQAARQIG*NHKIPN
Trigger: ATTGGGTATTTTGTGATTCAAACCTATCTGCCTTGC...TGCCTGAAATCCTTTAGGAGTTCTTGTAGTACTAATACTTCCATTAAAACCACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515082.5
CDS-3UTR CAA 90 bp CAAATGCATGTCTCCATTAAAGGTCTACTGGTAAGCTATGTCACTATATACATAGCAAGGCAGATAGGTTaGAATCACAAAATACCCAAT +
Preference number: 5 (lower is better)
Translates to: QMHVSIKGLLVSYVTIYIARQIG*NHKIPN
Trigger: ATTGGGTATTTTGTGATTCAAACCTATCTGCCTTGC...TATGTATATAGTGACATAGCTTACCAGTAGACCTTTAATGGAGACATGCATTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR CAA 90 bp GAACTGCTTTCACAAGAGAAAAATGTGCCAATTAACTGCCCTTTCCTTTATAATTCATTGTTAGGACAGTaGTTACTCCAAACACAGTTC +
Preference number: 5 (lower is better)
Translates to: ELLSQEKNVPINCPFLYNSLLGQ*LLQTQF
Trigger: GAACTGTGTTTGGAGTAACAACTGTCCTAACAATGA...ATTATAAAGGAAAGGGCAGTTAATTGGCACATTTTTCTCTTGTGAAAGCAGTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
CDS-3UTR CAA 90 bp CAAATGCATGTCTCCATTAAAGGTCTACTGGTAAGCTATGTCACTATATACATATCATTGTTAGGACAGTaGTTACTCCAAACACAGTTC +
Preference number: 5 (lower is better)
Translates to: QMHVSIKGLLVSYVTIYISLLGQ*LLQTQF
Trigger: GAACTGTGTTTGGAGTAACAACTGTCCTAACAATGA...TATGTATATAGTGACATAGCTTACCAGTAGACCTTTAATGGAGACATGCATTTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356504.5
ENST00000381620.9
ENST00000510861.5
ENST00000514090.5
ENST00000540012.5
ENST00000630416.2
CDS-3UTR CAA 90 bp TGGCAAATTCCGTTAATAAGTTGCATTTGTGACCTTGGTTTTATACAAGCATGCTTAAAGCACAATCAATaGCTTCAACGACTATGTCGA +
Preference number: 5 (lower is better)
Translates to: WQIPLISCICDLGFIQACLKHNQ*LQRLCR
Trigger: TCGACATAGTCGTTGAAGCAATTGATTGTGCTTTAA...GCATGCTTGTATAAAACCAAGGTCACAAATGCAACTTATTAACGGAATTTGCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381620.9
CDS-3UTR CAA 90 bp AGTGGTTTTAATGGAAGTATTAGTACTACAAGAACTCCTAAAGGATTTCAGGCAAAGCTCTCACTTACCTaGTCATTTACTACACTCTTC +
Preference number: 5 (lower is better)
Translates to: SGFNGSISTTRTPKGFQAKLSLT*SFTTLF
Trigger: GAAGAGTGTAGTAAATGACAAGGTAAGTGAGAGCTT...TGCCTGAAATCCTTTAGGAGTTCTTGTAGTACTAATACTTCCATTAAAACCACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515082.5
CDS-3UTR CAA 90 bp GTTAAAACCATGAACTTAACAGTCAGACAGGTAGATCGGAGTTCAAGTATACTTAGAGGATTCAATTCATaGATAGAGCCTGGAATTCTA +
Preference number: 5 (lower is better)
Translates to: VKTMNLTVRQVDRSSSILRGFNS*IEPGIL
Trigger: TAGAATTCCAGGCTCTATCAATGAATTGAATCCTCT...AAGTATACTTGAACTCCGATCTACCTGTCTGACTGTTAAGTTCATGGTTTTAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515082.5
CDS CCA 72 bp CTGCAGCAGCCAAGAGAGCGTGGAGCGATGGGCTGGTaGAAGCCGGAGAGGAGCGCTAGGAGCCGCGGCGGC +
Preference number: 6 (lower is better)
Translates to: LQQPRERGAMGW*KPERSARSRGG
Trigger: GCCGCCGCGGCTCCTAGCGCTCCTCTCCGGCTTCCACCAGCCCATCGCTCCACGCTCTCTTGGCTGCTGCAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381620.9
ENST00000540012.5
CDS CCA 72 bp GACCGAGACTGCAGCAGCCAAGAGAGCGTGGAGCGATaGGCTGGTGGAAGCCGGAGAGGAGCGCTAGGAGCC +
Preference number: 6 (lower is better)
Translates to: DRDCSSQESVER*AGGSRRGALGA
Trigger: GGCTCCTAGCGCTCCTCTCCGGCTTCCACCAGCCCATCGCTCCACGCTCTCTTGGCTGCTGCAGTCTCGGTC
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381620.9
ENST00000540012.5
CDS CCA 72 bp GAGAGAGAGACCGAGACTGCAGCAGCCAAGAGAGCGTaGAGCGATGGGCTGGTGGAAGCCGGAGAGGAGCGC +
Preference number: 6 (lower is better)
Translates to: ERETETAAAKRA*SDGLVEAGEER
Trigger: GCGCTCCTCTCCGGCTTCCACCAGCCCATCGCTCCACGCTCTCTTGGCTGCTGCAGTCTCGGTCTCTCTCTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381620.9
ENST00000540012.5
CDS GCA 72 bp CCAAGTCTTAGAGGCAGCCGGGTTCCGATCAAGTGCTaGGAAACGACGCGTTTGACAGCTGCTCTGGAGCCG +
Preference number: 6 (lower is better)
Translates to: PSLRGSRVPIKC*ETTRLTAALEP
Trigger: CGGCTCCAGAGCAGCTGTCAAACGCGTCGTTTCGCAGCACTTGATCGGAACCCGGCTGCCTCTAAGACTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS CAA 90 bp CTTAGAGGCAGCCGGGTTCCGATCAAGTGCTGCGAAACGACGCGTTaGACAGCTGCTCTGGAGCCGAGGATCACAATAAGAGAAGGCGCG +
Preference number: 6 (lower is better)
Translates to: LRGSRVPIKCCETTR*TAALEPRITIREGA
Trigger: CGCGCCTTCTCTTATTGTGATCCTCGGCTCCAGAGCAGCTGTCAAACGCGTCGTTTCGCAGCACTTGATCGGAACCCGGCTGCCTCTAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS GCA 72 bp AGAGAGAGAGAGAGAGAGAGAGAGAGAGACCGAGACTaGAGCAGCCAAGAGAGCGTGGAGCGATGGGCTGGT +
Preference number: 6 (lower is better)
Translates to: RERERERERDRD*SSQESVERWAG
Trigger: ACCAGCCCATCGCTCCACGCTCTCTTGGCTGCTGCAGTCTCGGTCTCTCTCTCTCTCTCTCTCTCTCTCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381620.9
ENST00000540012.5
CDS GCA 72 bp AGACCAAGTCTTAGAGGCAGCCGGGTTCCGATCAAGTaGTGCGAAACGACGCGTTTGACAGCTGCTCTGGAG +
Preference number: 6 (lower is better)
Translates to: RPSLRGSRVPIK*CETTRLTAALE
Trigger: CTCCAGAGCAGCTGTCAAACGCGTCGTTTCGCAGCACTTGATCGGAACCCGGCTGCCTCTAAGACTTGGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS CAA 72 bp AGCCGGGTTCCGATCAAGTGCTGCGAAACGACGCGTTaGACAGCTGCTCTGGAGCCGAGGATCACAATAAGA +
Preference number: 6 (lower is better)
Translates to: SRVPIKCCETTR*TAALEPRITIR
Trigger: TCTTATTGTGATCCTCGGCTCCAGAGCAGCTGTCAAACGCGTCGTTTCGCAGCACTTGATCGGAACCCGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS CAA 90 bp CCTCCGCAACCACAGCGGGAAAAGCTAGGGGCAGGCAGCCCACTTTaGCAATTACTCTACATTACAGTGAACTGCGGTCCTCACGTCTTC +
Preference number: 6 (lower is better)
Translates to: PPQPQREKLGAGSPL*QLLYITVNCGPHVF
Trigger: GAAGACGTGAGGACCGCAGTTCACTGTAATGTAGAGTAATTGCAAAAGTGGGCTGCCTGCCCCTAGCTTTTCCCGCTGTGGTTGCGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356504.5
CDS CAA 90 bp ACACCCTGGACTTTAAACTGGCATAGCAGCTGGAAAGGGAATGGGTaGGAGGGGAGGGGAGGAAAGGAGAGGAGAGGAGAGATGGGTACT +
Preference number: 6 (lower is better)
Translates to: TPWTLNWHSSWKGNG*EGRGGKERRGEMGT
Trigger: AGTACCCATCTCTCCTCTCCTCTCCTTTCCTCCCCTCCCCTCCAACCCATTCCCTTTCCAGCTGCTATGCCAGTTTAAAGTCCAGGGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356504.5
CDS CAA 72 bp ACTTTAAACTGGCATAGCAGCTGGAAAGGGAATGGGTaGGAGGGGAGGGGAGGAAAGGAGAGGAGAGGAGAG +
Preference number: 6 (lower is better)
Translates to: TLNWHSSWKGNG*EGRGGKERRGE
Trigger: CTCTCCTCTCCTCTCCTTTCCTCCCCTCCCCTCCAACCCATTCCCTTTCCAGCTGCTATGCCAGTTTAAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356504.5
CDS CAA 72 bp CCACAGCGGGAAAAGCTAGGGGCAGGCAGCCCACTTTaGCAATTACTCTACATTACAGTGAACTGCGGTCCT +
Preference number: 6 (lower is better)
Translates to: PQREKLGAGSPL*QLLYITVNCGP
Trigger: AGGACCGCAGTTCACTGTAATGTAGAGTAATTGCAAAAGTGGGCTGCCTGCCCCTAGCTTTTCCCGCTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356504.5
CDS CCA 72 bp TGCGCACACGTAATAATAACACCCTGGACTTTAAACTaGCATAGCAGCTGGAAAGGGAATGGGTTGGAGGGG +
Preference number: 6 (lower is better)
Translates to: CAHVIITPWTLN*HSSWKGNGLEG
Trigger: CCCCTCCAACCCATTCCCTTTCCAGCTGCTATGCCAGTTTAAAGTCCAGGGTGTTATTATTACGTGTGCGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356504.5
CDS GCA 72 bp AACGTCCCCCAGCCTCATCGTCAGCAAACACTGTTTTaGGCACACGTAATAATAACACCCTGGACTTTAAAC +
Preference number: 6 (lower is better)
Translates to: NVPQPHRQQTLF*AHVIITPWTLN
Trigger: GTTTAAAGTCCAGGGTGTTATTATTACGTGTGCGCAAAACAGTGTTTGCTGACGATGAGGCTGGGGGACGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356504.5
CDS CAA 72 bp GAACGTCCCCCAGCCTCATCGTCAGCAAACACTGTTTaGCGCACACGTAATAATAACACCCTGGACTTTAAA +
Preference number: 6 (lower is better)
Translates to: ERPPASSSANTV*RTRNNNTLDFK
Trigger: TTTAAAGTCCAGGGTGTTATTATTACGTGTGCGCAAAACAGTGTTTGCTGACGATGAGGCTGGGGGACGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356504.5
CDS TCA 72 bp AATTTTGTCTTCATCACCGCCGCTTCTACATTACAGTaGACTGCGGTCCTCACGTCTTCTTTTCTTCACTCC +
Preference number: 6 (lower is better)
Translates to: NFVFITAASTLQ*TAVLTSSFLHS
Trigger: GGAGTGAAGAAAAGAAGACGTGAGGACCGCAGTTCACTGTAATGTAGAAGCGGCGGTGATGAAGACAAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506961.5
CDS TCA 72 bp CTCATTCCTTTATTTGTTCTGCCCATGGAGAGCATTTaGGTTTGGGTCCCTTTGTTCTGGCTCTTGAAGGCT +
Preference number: 6 (lower is better)
Translates to: LIPLFVLPMESI*VWVPLFWLLKA
Trigger: AGCCTTCAAGAGCCAGAACAAAGGGACCCAAACTCAAATGCTCTCCATGGGCAGAACAAATAAAGGAATGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS TCA 72 bp ATCACCGCCGCTTTTTGCAATTACTCTACATTACAGTaGACTGCGGTCCTCACGTCTTCTTTTCTTCACTCC +
Preference number: 6 (lower is better)
Translates to: ITAAFCNYSTLQ*TAVLTSSFLHS
Trigger: GGAGTGAAGAAAAGAAGACGTGAGGACCGCAGTTCACTGTAATGTAGAGTAATTGCAAAAAGCGGCGGTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514090.5
CDS GCA 72 bp AAAGTTGAAGACTATAAAAGAGCCAGGCTAACGTGCTaGCGAGCAGGTGTCCTGGATTTTATTGTAGTTGCA +
Preference number: 6 (lower is better)
Translates to: KVEDYKRARLTC*RAGVLDFIVVA
Trigger: TGCAACTACAATAAAATCCAGGACACCTGCTCGGCAGCACGTTAGCCTGGCTCTTTTATAGTCTTCAACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS GCA 72 bp AGCAAAGTTGAAGACTATAAAAGAGCCAGGCTAACGTaGTGCCGAGCAGGTGTCCTGGATTTTATTGTAGTT +
Preference number: 6 (lower is better)
Translates to: SKVEDYKRARLT*CRAGVLDFIVV
Trigger: AACTACAATAAAATCCAGGACACCTGCTCGGCAGCACGTTAGCCTGGCTCTTTTATAGTCTTCAACTTTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507460.1
CDS CCA 72 bp CAAACACTGTTTTGCGCACACGTAATAATAACACCCTaGACTTTAAACTGGCATAGCAGCTGGAAAGGGAAT +
Preference number: 6 (lower is better)
Translates to: QTLFCAHVIITP*TLNWHSSWKGN
Trigger: ATTCCCTTTCCAGCTGCTATGCCAGTTTAAAGTCCAGGGTGTTATTATTACGTGTGCGCAAAACAGTGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356504.5
CDS CAA 72 bp TTCTTAATAATGATAACACGGAAGCTCTCACTTACCTaGTCATTTACTACACTCTTCCCATCCCAAGCCCAT +
Preference number: 6 (lower is better)
Translates to: FLIMITRKLSLT*SFTTLFPSQAH
Trigger: ATGGGCTTGGGATGGGAAGAGTGTAGTAAATGACAAGGTAAGTGAGAGCTTCCGTGTTATCATTATTAAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515082.5
CDS CAA 90 bp CCAAGAAAACAAAAAGCAGGAACTGCATGTTGTAGATGTTCAATTTaGTCTTCATCACCGCCGCTCTTTACAAAGCCATGGAATGAAAAA +
Preference number: 6 (lower is better)
Translates to: PRKQKAGTACCRCSI*SSSPPLFTKPWNEK
Trigger: TTTTTCATTCCATGGCTTTGTAAAGAGCGGCGGTGATGAAGACAAAATTGAACATCTACAACATGCAGTTCCTGCTTTTTGTTTTCTTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356504.5
CDS TCA 72 bp ATTCACCTCATGGTATACAGCAGAGTCCCATCATCCTaGATTCGAAGCAACTTATTTGGCATTGTCATATTA +
Preference number: 6 (lower is better)
Translates to: IHLMVYSRVPSS*IRSNLFGIVIL
Trigger: TAATATGACAATGCCAAATAAGTTGCTTCGAATTCAGGATGATGGGACTCTGCTGTATACCATGAGGTGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510233.5