Pregenerated sensors for GABPB1-IT1 (Homo sapiens)
Ensembl gene IDs: ENSG00000285410Ensembl transcript IDs: ENST00000615671.2
Found 43 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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CDS GCA 90 bp | GGCGGCGGCCGCCACCATGTCTGCCCGCCCCTCCCAGAAGCAGTGTaGCCAGCGGACAAAGCGCAGCGGCGGCGCGGGCGCCCAGGCCGA | + |
Preference number: 5 (lower is better) Translates to: GGGRHHVCPPLPEAV*PADKAQRRRGRPGR Trigger: TCGGCCTGGGCGCCCGCGCCGCCGCTGCGCTTTGTCCGCTGGGCACACTGCTTCTGGGAGGGGCGGGCAGACATGGTGGCGGCCGCCGCC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000615671.2 |
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CDS GCA 90 bp | CGCCGCCCGTTCCCCTCTCCGGAGAGCCCGGCGGGGCCGTCAGGCTaGCGAGACAAAGGGTACCGCGGCGCCAGAGGCCGAGGCCCAGCC | + |
Preference number: 5 (lower is better) Translates to: RRPFPSPESPAGPSG*RDKGYRGARGRGPA Trigger: GGCTGGGCCTCGGCCTCTGGCGCCGCGGTACCCTTTGTCTCGGCAGCCTGACGGCCCCGCCGGGCTCTCCGGAGAGGGGAACGGGCGGCG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000615671.2 |
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CDS GCA 90 bp | AGGCCGAGGCCCAGCCGCGCCTGCCTTCCTCTTTCTCCCGCCCACTaGCAACCTCCAGTCGCCCGCAGAACCTCCGCTGCCTCGGCGCGA | + |
Preference number: 5 (lower is better) Translates to: RPRPSRACLPLSPAH*QPPVARRTSAASAR Trigger: TCGCGCCGAGGCAGCGGAGGTTCTGCGGGCGACTGGAGGTTGGCAGTGGGCGGGAGAAAGAGGAAGGCAGGCGCGGCTGGGCCTCGGCCT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000615671.2 |
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CDS GCA 90 bp | AGACAAAGGGTACCGCGGCGCCAGAGGCCGAGGCCCAGCCGCGCCTaGCTTCCTCTTTCTCCCGCCCACTGCCAACCTCCAGTCGCCCGC | + |
Preference number: 5 (lower is better) Translates to: RQRVPRRQRPRPSRA*LPLSPAHCQPPVAR Trigger: GCGGGCGACTGGAGGTTGGCAGTGGGCGGGAGAAAGAGGAAGGCAGGCGCGGCTGGGCCTCGGCCTCTGGCGCCGCGGTACCCTTTGTCT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000615671.2 |
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CDS CCA 90 bp | TCTTCCCTGAGGCAGTGCACCCGCAGTTCTCGGCGGCGAAGTCTTTaGGGCAGAAGTCCCGAGCCTTCAGAACGGCAGGCTTCTCCCCCT | + |
Preference number: 5 (lower is better) Translates to: SSLRQCTRSSRRRSL*GRSPEPSERQASPP Trigger: AGGGGGAGAAGCCTGCCGTTCTGAAGGCTCGGGACTTCTGCCCCAAAGACTTCGCCGCCGAGAACTGCGGGTGCACTGCCTCAGGGAAGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000615671.2 |
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CDS TCA 90 bp | TGTGCCCTGGCAGAGATGACCTGGCAAAATTCTCAACTTCTTCCCTaGGGCAGTGCACCCGCAGTTCTCGGCGGCGAAGTCTTTGGGGCA | + |
Preference number: 5 (lower is better) Translates to: CALAEMTWQNSQLLP*GSAPAVLGGEVFGA Trigger: TGCCCCAAAGACTTCGCCGCCGAGAACTGCGGGTGCACTGCCTCAGGGAAGAAGTTGAGAATTTTGCCAGGTCATCTCTGCCAGGGCACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000615671.2 |
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CDS GCA 90 bp | GGCAGAGATGACCTGGCAAAATTCTCAACTTCTTCCCTGAGGCAGTaGACCCGCAGTTCTCGGCGGCGAAGTCTTTGGGGCAGAAGTCCC | + |
Preference number: 5 (lower is better) Translates to: GRDDLAKFSTSSLRQ*TRSSRRRSLWGRSP Trigger: GGGACTTCTGCCCCAAAGACTTCGCCGCCGAGAACTGCGGGTGCACTGCCTCAGGGAAGAAGTTGAGAATTTTGCCAGGTCATCTCTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000615671.2 |
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CDS GCA 90 bp | GCCTGGGTAACAGAGAAAGCAAGACCCTGTCAAAGAAAGAAGAGGTaGAAAGGGGAAAACAGGGAGGGAAGGAGAGAGAGGGAGAGGGAC | + |
Preference number: 5 (lower is better) Translates to: AWVTEKARPCQRKKR*KGENREGRRERERD Trigger: GTCCCTCTCCCTCTCTCTCCTTCCCTCCCTGTTTTCCCCTTTGCACCTCTTCTTTCTTTGACAGGGTCTTGCTTTCTCTGTTACCCAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000615671.2 |
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CDS TCA 90 bp | AGGGAGGGAGGGAGACAGAAAGGTGCACTAGCCCACCAACTGAACTaGCAGCTGATTGCACCAAAGCATCTTCTTTGTATAGAGCACTGT | + |
Preference number: 5 (lower is better) Translates to: REGGRQKGALAHQLN*QLIAPKHLLCIEHC Trigger: ACAGTGCTCTATACAAAGAAGATGCTTTGGTGCAATCAGCTGTCAGTTCAGTTGGTGGGCTAGTGCACCTTTCTGTCTCCCTCCCTCCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000615671.2 |
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CDS GCA 90 bp | ACACAAAGCAGGCCTGTATCATTCCTTTGGTTTCAGTTTTCACGATaGACCCTTGAGGCTAGGCACGCTGATTCAACACACTTGGAGAGC | + |
Preference number: 5 (lower is better) Translates to: TQSRPVSFLWFQFSR*TLEARHADSTHLES Trigger: GCTCTCCAAGTGTGTTGAATCAGCGTGCCTAGCCTCAAGGGTGCATCGTGAAAACTGAAACCAAAGGAATGATACAGGCCTGCTTTGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000615671.2 |
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CDS CCA 90 bp | TTTCACGATGCACCCTTGAGGCTAGGCACGCTGATTCAACACACTTaGAGAGCTTCACCGAAACACACTAAACACACAGTGATGAACTGT | + |
Preference number: 5 (lower is better) Translates to: FHDAPLRLGTLIQHT*RASPKHTKHTVMNC Trigger: ACAGTTCATCACTGTGTGTTTAGTGTGTTTCGGTGAAGCTCTCCAAGTGTGTTGAATCAGCGTGCCTAGCCTCAAGGGTGCATCGTGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000615671.2 |
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CDS CCA 90 bp | CTTAAAGTGGGAAGACACACACAAAGCAGGCCTGTATCATTCCTTTaGTTTCAGTTTTCACGATGCACCCTTGAGGCTAGGCACGCTGAT | + |
Preference number: 5 (lower is better) Translates to: LKVGRHTQSRPVSFL*FQFSRCTLEARHAD Trigger: ATCAGCGTGCCTAGCCTCAAGGGTGCATCGTGAAAACTGAAACCAAAGGAATGATACAGGCCTGCTTTGTGTGTGTCTTCCCACTTTAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000615671.2 |
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CDS TCA 90 bp | AAACTTCCACCCACTGACCCTAGTTCCTTCTGGTCAAGTCAAATCTaGTCCTTCTGCATGACAGAACTCCAAATCCTTAAAAGTGGCTGT | + |
Preference number: 5 (lower is better) Translates to: KLPPTDPSSFWSSQI*SFCMTELQILKSGC Trigger: ACAGCCACTTTTAAGGATTTGGAGTTCTGTCATGCAGAAGGATCAGATTTGACTTGACCAGAAGGAACTAGGGTCAGTGGGTGGAAGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000615671.2 |
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CDS CCA 90 bp | CCATCAGTGAGTTCATCTGAACTCAGGCTACTTGCAAACAGAGACTaGGTAACTGCCTCGTGCACCCTCAAAAATAAATTCATGATGCAA | + |
Preference number: 5 (lower is better) Translates to: PSVSSSELRLLANRD*VTASCTLKNKFMMQ Trigger: TTGCATCATGAATTTATTTTTGAGGGTGCACGAGGCAGTTACCCAGTCTCTGTTTGCAAGTAGCCTGAGTTCAGATGAACTCACTGATGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000615671.2 |
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CDS TCA 90 bp | AGTGGAGTGTTCCAGAGGTTACATGGTGTGCTAACCACAACAGTCTaGCGTAGATCTGAGAATCTTCTATTAAACCAGGCATTAAAAAGA | + |
Preference number: 5 (lower is better) Translates to: SGVFQRLHGVLTTTV*RRSENLLLNQALKR Trigger: TCTTTTTAATGCCTGGTTTAATAGAAGATTCTCAGATCTACGTCAGACTGTTGTGGTTAGCACACCATGTAACCTCTGGAACACTCCACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000615671.2 |
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CDS GCA 72 bp | CGCCACCATGTCTGCCCGCCCCTCCCAGAAGCAGTGTaGCCAGCGGACAAAGCGCAGCGGCGGCGCGGGCGC | + |
Preference number: 6 (lower is better) Translates to: RHHVCPPLPEAV*PADKAQRRRGR Trigger: GCGCCCGCGCCGCCGCTGCGCTTTGTCCGCTGGGCACACTGCTTCTGGGAGGGGCGGGCAGACATGGTGGCG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000615671.2 |
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CDS GCA 72 bp | TTCCCCTCTCCGGAGAGCCCGGCGGGGCCGTCAGGCTaGCGAGACAAAGGGTACCGCGGCGCCAGAGGCCGA | + |
Preference number: 6 (lower is better) Translates to: FPSPESPAGPSG*RDKGYRGARGR Trigger: TCGGCCTCTGGCGCCGCGGTACCCTTTGTCTCGGCAGCCTGACGGCCCCGCCGGGCTCTCCGGAGAGGGGAA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000615671.2 |
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CDS CCA 72 bp | GGCCAAGGCTGTCGCTGCGGGGGCCCCGCGCGGGACTaGCCAGGCTCTTCCATTAACCCTGTCTGGTCCGGC | + |
Preference number: 6 (lower is better) Translates to: GQGCRCGGPARD*PGSSINPVWSG Trigger: GCCGGACCAGACAGGGTTAATGGAAGAGCCTGGCCAGTCCCGCGCGGGGCCCCCGCAGCGACAGCCTTGGCC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000615671.2 |
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CDS GCA 72 bp | CCCAGCCGCGCCTGCCTTCCTCTTTCTCCCGCCCACTaGCAACCTCCAGTCGCCCGCAGAACCTCCGCTGCC | + |
Preference number: 6 (lower is better) Translates to: PSRACLPLSPAH*QPPVARRTSAA Trigger: GGCAGCGGAGGTTCTGCGGGCGACTGGAGGTTGGCAGTGGGCGGGAGAAAGAGGAAGGCAGGCGCGGCTGGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000615671.2 |
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CDS CCA 72 bp | GCGCGGGACTGGCCAGGCTCTTCCATTAACCCTGTCTaGTCCGGCCGATCCCGCCGCGACCCGAGCGCCTCT | + |
Preference number: 6 (lower is better) Translates to: ARDWPGSSINPV*SGRSRRDPSAS Trigger: AGAGGCGCTCGGGTCGCGGCGGGATCGGCCGGACCAGACAGGGTTAATGGAAGAGCCTGGCCAGTCCCGCGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000615671.2 |
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CDS CAA 72 bp | GAGGCAGTGCACCCGCAGTTCTCGGCGGCGAAGTCTTaGGGGCAGAAGTCCCGAGCCTTCAGAACGGCAGGC | + |
Preference number: 6 (lower is better) Translates to: EAVHPQFSAAKS*GQKSRAFRTAG Trigger: GCCTGCCGTTCTGAAGGCTCGGGACTTCTGCCCCAAAGACTTCGCCGCCGAGAACTGCGGGTGCACTGCCTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000615671.2 |
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CDS CCA 72 bp | AGGCAGTGCACCCGCAGTTCTCGGCGGCGAAGTCTTTaGGGCAGAAGTCCCGAGCCTTCAGAACGGCAGGCT | + |
Preference number: 6 (lower is better) Translates to: RQCTRSSRRRSL*GRSPEPSERQA Trigger: AGCCTGCCGTTCTGAAGGCTCGGGACTTCTGCCCCAAAGACTTCGCCGCCGAGAACTGCGGGTGCACTGCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000615671.2 |
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CDS CAA 90 bp | TTCTTCCCTGAGGCAGTGCACCCGCAGTTCTCGGCGGCGAAGTCTTaGGGGCAGAAGTCCCGAGCCTTCAGAACGGCAGGCTTCTCCCCC | + |
Preference number: 6 (lower is better) Translates to: FFPEAVHPQFSAAKS*GQKSRAFRTAGFSP Trigger: GGGGGAGAAGCCTGCCGTTCTGAAGGCTCGGGACTTCTGCCCCAAAGACTTCGCCGCCGAGAACTGCGGGTGCACTGCCTCAGGGAAGAA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000615671.2 |
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CDS GCA 72 bp | GACCTGGCAAAATTCTCAACTTCTTCCCTGAGGCAGTaGACCCGCAGTTCTCGGCGGCGAAGTCTTTGGGGC | + |
Preference number: 6 (lower is better) Translates to: DLAKFSTSSLRQ*TRSSRRRSLWG Trigger: GCCCCAAAGACTTCGCCGCCGAGAACTGCGGGTGCACTGCCTCAGGGAAGAAGTTGAGAATTTTGCCAGGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000615671.2 |
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CDS CAA 72 bp | GCCCCCTTCAGAAGTACTGTGGTCTCGGCCCCTCCTTaGAACAGATGTCCGCTCGCCACAGTCCAATCAGGT | + |
Preference number: 6 (lower is better) Translates to: APFRSTVVSAPP*NRCPLATVQSG Trigger: ACCTGATTGGACTGTGGCGAGCGGACATCTGTTCAAAGGAGGGGCCGAGACCACAGTACTTCTGAAGGGGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000615671.2 |
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CDS TCA 72 bp | CCCCCTTCAGAAGTACTGTGGTCTCGGCCCCTCCTTTaGACAGATGTCCGCTCGCCACAGTCCAATCAGGTT | + |
Preference number: 6 (lower is better) Translates to: PPSEVLWSRPLL*TDVRSPQSNQV Trigger: AACCTGATTGGACTGTGGCGAGCGGACATCTGTTCAAAGGAGGGGCCGAGACCACAGTACTTCTGAAGGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000615671.2 |
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CDS CAA 72 bp | CTCCTGTTGCCCAAGCTGGAATGCAATGGCGCTATCTaGGCTTATTGCAACCTTTGCCTCTCTGGCTCAAGC | + |
Preference number: 6 (lower is better) Translates to: LLLPKLECNGAI*AYCNLCLSGSS Trigger: GCTTGAGCCAGAGAGGCAAAGGTTGCAATAAGCCAAGATAGCGCCATTGCATTCCAGCTTGGGCAACAGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000615671.2 |
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CDS CAA 90 bp | GCAGGCCTGTATCATTCCTTTGGTTTCAGTTTTCACGATGCACCCTaGAGGCTAGGCACGCTGATTCAACACACTTGGAGAGCTTCACCG | + |
Preference number: 6 (lower is better) Translates to: AGLYHSFGFSFHDAP*RLGTLIQHTWRASP Trigger: CGGTGAAGCTCTCCAAGTGTGTTGAATCAGCGTGCCTAGCCTCAAGGGTGCATCGTGAAAACTGAAACCAAAGGAATGATACAGGCCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000615671.2 |
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CDS CAA 90 bp | CATTATCAAGCCCCCTTCAGAAGTACTGTGGTCTCGGCCCCTCCTTaGAACAGATGTCCGCTCGCCACAGTCCAATCAGGTTTAAAGCAA | + |
Preference number: 6 (lower is better) Translates to: HYQAPFRSTVVSAPP*NRCPLATVQSGLKQ Trigger: TTGCTTTAAACCTGATTGGACTGTGGCGAGCGGACATCTGTTCAAAGGAGGGGCCGAGACCACAGTACTTCTGAAGGGGGCTTGATAATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000615671.2 |
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CDS GCA 72 bp | CCCAAGCTGGAATGCAATGGCGCTATCTTGGCTTATTaGAACCTTTGCCTCTCTGGCTCAAGCGATTCTCCT | + |
Preference number: 6 (lower is better) Translates to: PKLECNGAILAY*NLCLSGSSDSP Trigger: AGGAGAATCGCTTGAGCCAGAGAGGCAAAGGTTGCAATAAGCCAAGATAGCGCCATTGCATTCCAGCTTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000615671.2 |
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CDS CCA 72 bp | GCACCCTTGAGGCTAGGCACGCTGATTCAACACACTTaGAGAGCTTCACCGAAACACACTAAACACACAGTG | + |
Preference number: 6 (lower is better) Translates to: APLRLGTLIQHT*RASPKHTKHTV Trigger: CACTGTGTGTTTAGTGTGTTTCGGTGAAGCTCTCCAAGTGTGTTGAATCAGCGTGCCTAGCCTCAAGGGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000615671.2 |
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CDS GCA 72 bp | AGGCCTGTATCATTCCTTTGGTTTCAGTTTTCACGATaGACCCTTGAGGCTAGGCACGCTGATTCAACACAC | + |
Preference number: 6 (lower is better) Translates to: RPVSFLWFQFSR*TLEARHADSTH Trigger: GTGTGTTGAATCAGCGTGCCTAGCCTCAAGGGTGCATCGTGAAAACTGAAACCAAAGGAATGATACAGGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000615671.2 |
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CDS CAA 72 bp | CCTTCAGTACGATTCCTCTACTCTAGAATCCCCAATTaGTCAGTGAACAGGAACAGCCTACCACCCAAAACA | + |
Preference number: 6 (lower is better) Translates to: PSVRFLYSRIPN*SVNRNSLPPKT Trigger: TGTTTTGGGTGGTAGGCTGTTCCTGTTCACTGACAAATTGGGGATTCTAGAGTAGAGGAATCGTACTGAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000615671.2 |
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CDS TCA 72 bp | CCCACTGACCCTAGTTCCTTCTGGTCAAGTCAAATCTaGTCCTTCTGCATGACAGAACTCCAAATCCTTAAA | + |
Preference number: 6 (lower is better) Translates to: PTDPSSFWSSQI*SFCMTELQILK Trigger: TTTAAGGATTTGGAGTTCTGTCATGCAGAAGGATCAGATTTGACTTGACCAGAAGGAACTAGGGTCAGTGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000615671.2 |
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CDS CCA 72 bp | AGTTCATCTGAACTCAGGCTACTTGCAAACAGAGACTaGGTAACTGCCTCGTGCACCCTCAAAAATAAATTC | + |
Preference number: 6 (lower is better) Translates to: SSSELRLLANRD*VTASCTLKNKF Trigger: GAATTTATTTTTGAGGGTGCACGAGGCAGTTACCCAGTCTCTGTTTGCAAGTAGCCTGAGTTCAGATGAACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000615671.2 |
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CDS CAA 72 bp | AGAGGGGAGCAGAGGGATGACACTAAGGAAACTAAGTaGCTCTCAACTTCAAGATTTTGTGTGGGTTTGTTT | + |
Preference number: 6 (lower is better) Translates to: RGEQRDDTKETK*LSTSRFCVGLF Trigger: AAACAAACCCACACAAAATCTTGAAGTTGAGAGCAACTTAGTTTCCTTAGTGTCATCCCTCTGCTCCCCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000615671.2 |
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CDS CAA 90 bp | TCAAATTCTCCTTCAGTACGATTCCTCTACTCTAGAATCCCCAATTaGTCAGTGAACAGGAACAGCCTACCACCCAAAACAACTCATTCT | + |
Preference number: 6 (lower is better) Translates to: SNSPSVRFLYSRIPN*SVNRNSLPPKTTHS Trigger: AGAATGAGTTGTTTTGGGTGGTAGGCTGTTCCTGTTCACTGACAAATTGGGGATTCTAGAGTAGAGGAATCGTACTGAAGGAGAATTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000615671.2 |
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CDS GCA 72 bp | GATTCAGAGAGACAAAGAACTCTAAGGATATGTCTCTaGAAACTGTTCGTTTCACCAAAGGATTCACTGCAG | + |
Preference number: 6 (lower is better) Translates to: DSERQRTLRICL*KLFVSPKDSLQ Trigger: CTGCAGTGAATCCTTTGGTGAAACGAACAGTTTGCAGAGACATATCCTTAGAGTTCTTTGTCTCTCTGAATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000615671.2 |
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CDS CAA 90 bp | ACTAAGGAAACTAAGTTGCTCTCAACTTCAAGATTTTGTGTGGGTTaGTTTTTCAACGTTTGCAAAGTCAGAAGAGATGGAGGCCATCAG | + |
Preference number: 6 (lower is better) Translates to: TKETKLLSTSRFCVG*FFNVCKVRRDGGHQ Trigger: CTGATGGCCTCCATCTCTTCTGACTTTGCAAACGTTGAAAAACAAACCCACACAAAATCTTGAAGTTGAGAGCAACTTAGTTTCCTTAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000615671.2 |
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CDS TCA 72 bp | GTGATTTTGACACTTAGGTGTCTACCACCTTGGAAATaGGAAAAATTAAGGTCCGTTCCTACCCTACTTAAG | + |
Preference number: 6 (lower is better) Translates to: VILTLRCLPPWK*EKLRSVPTLLK Trigger: CTTAAGTAGGGTAGGAACGGACCTTAATTTTTCTCATTTCCAAGGTGGTAGACACCTAAGTGTCAAAATCAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000615671.2 |
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CDS GCA 72 bp | TCTGAGAATGAATACAAGGTCTCACTTATGATAGTATaGTACCCAAAAAGCCAACACAATACCCCAAATATA | + |
Preference number: 6 (lower is better) Translates to: SENEYKVSLMIV*YPKSQHNTPNI Trigger: TATATTTGGGGTATTGTGTTGGCTTTTTGGGTAGCATACTATCATAAGTGAGACCTTGTATTCATTCTCAGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000615671.2 |
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CDS CAA 72 bp | TCCAGGAAGGCAAAAACTATTATCAAGTTAACCAGTTaGTTTCACTCAATTAGCTTTTTGTTCTTCCACCTG | + |
Preference number: 6 (lower is better) Translates to: SRKAKTIIKLTS*FHSISFLFFHL Trigger: CAGGTGGAAGAACAAAAAGCTAATTGAGTGAAACAAACTGGTTAACTTGATAATAGTTTTTGCCTTCCTGGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000615671.2 |
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CDS CAA 72 bp | GGCATATTTAATAAAACCTCAAAGTTTATAGGTAACTaGAAGACACCTAGCTCAAATTCTCCTTCAGTACGA | + |
Preference number: 6 (lower is better) Translates to: GIFNKTSKFIGN*KTPSSNSPSVR Trigger: TCGTACTGAAGGAGAATTTGAGCTAGGTGTCTTCAAGTTACCTATAAACTTTGAGGTTTTATTAAATATGCC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000615671.2 |