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Pregenerated sensors for GABPA (Homo sapiens)

Ensembl gene IDs: ENSG00000154727

Ensembl transcript IDs: ENST00000354828.7, ENST00000400075.4

Found 12 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS GCA 90 bp GCCTCCCAGGCACCTTCGGGTCCAGGACTACAACTCCCGGCAGGGTaGGCAAAACGACCGCCCAAGGCAACGGAGGCTCACGAGGTACAA +
Preference number: 5 (lower is better)
Translates to: ASQAPSGPGLQLPAG*AKRPPKATEAHEVQ
Trigger: TTGTACCTCGTGAGCCTCCGTTGCCTTGGGCGGTCGTTTTGCGCACCCTGCCGGGAGTTGTAGTCCTGGACCCGAAGGTGCCTGGGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400075.4
CDS CCA 90 bp GGCTGCCTCTCACCTTTACTAGGAGGAGAGAGCAGCTCTGTGTCCTaGGGACCTTCACGGCCTGGCCCGGGGTCACAGCTGACCTCTACG +
Preference number: 5 (lower is better)
Translates to: GCLSPLLGGESSSVS*GPSRPGPGSQLTST
Trigger: CGTAGAGGTCAGCTGTGACCCCGGGCCAGGCCGTGAAGGTCCCCAGGACACAGAGCTGCTCTCTCCTCCTAGTAAAGGTGAGAGGCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354828.7
CDS TCA 90 bp ACTTCGATAACCCTAACGAACAGGACGCTGACTCGGAGGGGAGCTTaGACTAGGGGAAAGGCCACTCAAAGAGCGCATGCGTACAGAGCA +
Preference number: 5 (lower is better)
Translates to: TSITLTNRTLTRRGA*TRGKATQRAHAYRA
Trigger: TGCTCTGTACGCATGCGCTCTTTGAGTGGCCTTTCCCCTAGTTCAAGCTCCCCTCCGAGTCAGCGTCCTGTTCGTTAGGGTTATCGAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400075.4
CDS GCA 90 bp GGCCCGGGGTCACAGCTGACCTCTACGTTTGTAGACCTTGGAGTTTaGCGTAGACCCAGAAATAAGATCGATACCCTCTCTGAGGGCAAA +
Preference number: 5 (lower is better)
Translates to: GPGSQLTSTFVDLGV*RRPRNKIDTLSEGK
Trigger: TTTGCCCTCAGAGAGGGTATCGATCTTATTTCTGGGTCTACGGCAAACTCCAAGGTCTACAAACGTAGAGGTCAGCTGTGACCCCGGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354828.7
CDS GCA 90 bp GCACAACGCCCCAATCCGCTTTGTTTTACACAGTCTCACTTTCCCTaGACCTTTATACACTTCGATAACCCTAACGAACAGGACGCTGAC +
Preference number: 5 (lower is better)
Translates to: AQRPNPLCFTQSHFP*TFIHFDNPNEQDAD
Trigger: GTCAGCGTCCTGTTCGTTAGGGTTATCGAAGTGTATAAAGGTGCAGGGAAAGTGAGACTGTGTAAAACAAAGCGGATTGGGGCGTTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400075.4
CDS GCA 72 bp GCACCTTCGGGTCCAGGACTACAACTCCCGGCAGGGTaGGCAAAACGACCGCCCAAGGCAACGGAGGCTCAC +
Preference number: 6 (lower is better)
Translates to: APSGPGLQLPAG*AKRPPKATEAH
Trigger: GTGAGCCTCCGTTGCCTTGGGCGGTCGTTTTGCGCACCCTGCCGGGAGTTGTAGTCCTGGACCCGAAGGTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400075.4
CDS CCA 72 bp TCACCTTTACTAGGAGGAGAGAGCAGCTCTGTGTCCTaGGGACCTTCACGGCCTGGCCCGGGGTCACAGCTG +
Preference number: 6 (lower is better)
Translates to: SPLLGGESSSVS*GPSRPGPGSQL
Trigger: CAGCTGTGACCCCGGGCCAGGCCGTGAAGGTCCCCAGGACACAGAGCTGCTCTCTCCTCCTAGTAAAGGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354828.7
CDS TCA 72 bp ACCCTAACGAACAGGACGCTGACTCGGAGGGGAGCTTaGACTAGGGGAAAGGCCACTCAAAGAGCGCATGCG +
Preference number: 6 (lower is better)
Translates to: TLTNRTLTRRGA*TRGKATQRAHA
Trigger: CGCATGCGCTCTTTGAGTGGCCTTTCCCCTAGTTCAAGCTCCCCTCCGAGTCAGCGTCCTGTTCGTTAGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400075.4
CDS CAA 90 bp ACGGAGGCTCACGAGGTACAAGGAAGCACAACGCCCCAATCCGCTTaGTTTTACACAGTCTCACTTTCCCTGCACCTTTATACACTTCGA +
Preference number: 6 (lower is better)
Translates to: TEAHEVQGSTTPQSA*FYTVSLSLHLYTLR
Trigger: TCGAAGTGTATAAAGGTGCAGGGAAAGTGAGACTGTGTAAAACAAAGCGGATTGGGGCGTTGTGCTTCCTTGTACCTCGTGAGCCTCCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400075.4
CDS CAA 72 bp CACGAGGTACAAGGAAGCACAACGCCCCAATCCGCTTaGTTTTACACAGTCTCACTTTCCCTGCACCTTTAT +
Preference number: 6 (lower is better)
Translates to: HEVQGSTTPQSA*FYTVSLSLHLY
Trigger: ATAAAGGTGCAGGGAAAGTGAGACTGTGTAAAACAAAGCGGATTGGGGCGTTGTGCTTCCTTGTACCTCGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400075.4
CDS GCA 72 bp TCACAGCTGACCTCTACGTTTGTAGACCTTGGAGTTTaGCGTAGACCCAGAAATAAGATCGATACCCTCTCT +
Preference number: 6 (lower is better)
Translates to: SQLTSTFVDLGV*RRPRNKIDTLS
Trigger: AGAGAGGGTATCGATCTTATTTCTGGGTCTACGGCAAACTCCAAGGTCTACAAACGTAGAGGTCAGCTGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354828.7
CDS GCA 72 bp CCCAATCCGCTTTGTTTTACACAGTCTCACTTTCCCTaGACCTTTATACACTTCGATAACCCTAACGAACAG +
Preference number: 6 (lower is better)
Translates to: PNPLCFTQSHFP*TFIHFDNPNEQ
Trigger: CTGTTCGTTAGGGTTATCGAAGTGTATAAAGGTGCAGGGAAAGTGAGACTGTGTAAAACAAAGCGGATTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400075.4