Pregenerated sensors for GABPA (Homo sapiens)
Ensembl gene IDs: ENSG00000154727Ensembl transcript IDs: ENST00000354828.7, ENST00000400075.4
Found 12 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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CDS GCA 90 bp | GCCTCCCAGGCACCTTCGGGTCCAGGACTACAACTCCCGGCAGGGTaGGCAAAACGACCGCCCAAGGCAACGGAGGCTCACGAGGTACAA | + |
Preference number: 5 (lower is better) Translates to: ASQAPSGPGLQLPAG*AKRPPKATEAHEVQ Trigger: TTGTACCTCGTGAGCCTCCGTTGCCTTGGGCGGTCGTTTTGCGCACCCTGCCGGGAGTTGTAGTCCTGGACCCGAAGGTGCCTGGGAGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000400075.4 |
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CDS CCA 90 bp | GGCTGCCTCTCACCTTTACTAGGAGGAGAGAGCAGCTCTGTGTCCTaGGGACCTTCACGGCCTGGCCCGGGGTCACAGCTGACCTCTACG | + |
Preference number: 5 (lower is better) Translates to: GCLSPLLGGESSSVS*GPSRPGPGSQLTST Trigger: CGTAGAGGTCAGCTGTGACCCCGGGCCAGGCCGTGAAGGTCCCCAGGACACAGAGCTGCTCTCTCCTCCTAGTAAAGGTGAGAGGCAGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000354828.7 |
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CDS TCA 90 bp | ACTTCGATAACCCTAACGAACAGGACGCTGACTCGGAGGGGAGCTTaGACTAGGGGAAAGGCCACTCAAAGAGCGCATGCGTACAGAGCA | + |
Preference number: 5 (lower is better) Translates to: TSITLTNRTLTRRGA*TRGKATQRAHAYRA Trigger: TGCTCTGTACGCATGCGCTCTTTGAGTGGCCTTTCCCCTAGTTCAAGCTCCCCTCCGAGTCAGCGTCCTGTTCGTTAGGGTTATCGAAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000400075.4 |
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CDS GCA 90 bp | GGCCCGGGGTCACAGCTGACCTCTACGTTTGTAGACCTTGGAGTTTaGCGTAGACCCAGAAATAAGATCGATACCCTCTCTGAGGGCAAA | + |
Preference number: 5 (lower is better) Translates to: GPGSQLTSTFVDLGV*RRPRNKIDTLSEGK Trigger: TTTGCCCTCAGAGAGGGTATCGATCTTATTTCTGGGTCTACGGCAAACTCCAAGGTCTACAAACGTAGAGGTCAGCTGTGACCCCGGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000354828.7 |
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CDS GCA 90 bp | GCACAACGCCCCAATCCGCTTTGTTTTACACAGTCTCACTTTCCCTaGACCTTTATACACTTCGATAACCCTAACGAACAGGACGCTGAC | + |
Preference number: 5 (lower is better) Translates to: AQRPNPLCFTQSHFP*TFIHFDNPNEQDAD Trigger: GTCAGCGTCCTGTTCGTTAGGGTTATCGAAGTGTATAAAGGTGCAGGGAAAGTGAGACTGTGTAAAACAAAGCGGATTGGGGCGTTGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000400075.4 |
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CDS GCA 72 bp | GCACCTTCGGGTCCAGGACTACAACTCCCGGCAGGGTaGGCAAAACGACCGCCCAAGGCAACGGAGGCTCAC | + |
Preference number: 6 (lower is better) Translates to: APSGPGLQLPAG*AKRPPKATEAH Trigger: GTGAGCCTCCGTTGCCTTGGGCGGTCGTTTTGCGCACCCTGCCGGGAGTTGTAGTCCTGGACCCGAAGGTGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000400075.4 |
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CDS CCA 72 bp | TCACCTTTACTAGGAGGAGAGAGCAGCTCTGTGTCCTaGGGACCTTCACGGCCTGGCCCGGGGTCACAGCTG | + |
Preference number: 6 (lower is better) Translates to: SPLLGGESSSVS*GPSRPGPGSQL Trigger: CAGCTGTGACCCCGGGCCAGGCCGTGAAGGTCCCCAGGACACAGAGCTGCTCTCTCCTCCTAGTAAAGGTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000354828.7 |
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CDS TCA 72 bp | ACCCTAACGAACAGGACGCTGACTCGGAGGGGAGCTTaGACTAGGGGAAAGGCCACTCAAAGAGCGCATGCG | + |
Preference number: 6 (lower is better) Translates to: TLTNRTLTRRGA*TRGKATQRAHA Trigger: CGCATGCGCTCTTTGAGTGGCCTTTCCCCTAGTTCAAGCTCCCCTCCGAGTCAGCGTCCTGTTCGTTAGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000400075.4 |
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CDS CAA 90 bp | ACGGAGGCTCACGAGGTACAAGGAAGCACAACGCCCCAATCCGCTTaGTTTTACACAGTCTCACTTTCCCTGCACCTTTATACACTTCGA | + |
Preference number: 6 (lower is better) Translates to: TEAHEVQGSTTPQSA*FYTVSLSLHLYTLR Trigger: TCGAAGTGTATAAAGGTGCAGGGAAAGTGAGACTGTGTAAAACAAAGCGGATTGGGGCGTTGTGCTTCCTTGTACCTCGTGAGCCTCCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000400075.4 |
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CDS CAA 72 bp | CACGAGGTACAAGGAAGCACAACGCCCCAATCCGCTTaGTTTTACACAGTCTCACTTTCCCTGCACCTTTAT | + |
Preference number: 6 (lower is better) Translates to: HEVQGSTTPQSA*FYTVSLSLHLY Trigger: ATAAAGGTGCAGGGAAAGTGAGACTGTGTAAAACAAAGCGGATTGGGGCGTTGTGCTTCCTTGTACCTCGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000400075.4 |
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CDS GCA 72 bp | TCACAGCTGACCTCTACGTTTGTAGACCTTGGAGTTTaGCGTAGACCCAGAAATAAGATCGATACCCTCTCT | + |
Preference number: 6 (lower is better) Translates to: SQLTSTFVDLGV*RRPRNKIDTLS Trigger: AGAGAGGGTATCGATCTTATTTCTGGGTCTACGGCAAACTCCAAGGTCTACAAACGTAGAGGTCAGCTGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000354828.7 |
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CDS GCA 72 bp | CCCAATCCGCTTTGTTTTACACAGTCTCACTTTCCCTaGACCTTTATACACTTCGATAACCCTAACGAACAG | + |
Preference number: 6 (lower is better) Translates to: PNPLCFTQSHFP*TFIHFDNPNEQ Trigger: CTGTTCGTTAGGGTTATCGAAGTGTATAAAGGTGCAGGGAAAGTGAGACTGTGTAAAACAAAGCGGATTGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000400075.4 |