Pregenerated sensors for GABARAPL2 (Homo sapiens)
Ensembl gene IDs: ENSG00000034713Ensembl transcript IDs: ENST00000565057.5, ENST00000565985.1, ENST00000568455.1
Found 28 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CAA 90 bp | AGATTTCTAGTCAGGACCCCTAAGAGTTTTCAGACTTCCAAAGTTTaGGAGTTCCGTAAGCAGCCAACCAGATGTCTAATACCAGAGGGC | + |
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Preference number: 2 (lower is better) Translates to: RFLVRTPKSFQTSKV*EFRKQPTRCLIPEG Trigger: GCCCTCTGGTATTAGACATCTGGTTGGCTGCTTACGGAACTCCAAAACTTTGGAAGTCTGAAAACTCTTAGGGGTCCTGACTAGAAATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000565057.5 |
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| CDS-3UTR TCA 90 bp | TTCCGTAAGCAGCCAACCAGATGTCTAATACCAGAGGGCCCATCTAGTAAACACATGATCCACATGAACTaGGCCACAGTGATATCAGAT | + |
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Preference number: 4 (lower is better) Translates to: FRKQPTRCLIPEGPSSKHMIHMN*ATVISD Trigger: ATCTGATATCACTGTGGCTCAGTTCATGTGGATCAT...GTGTTTACTAGATGGGCCCTCTGGTATTAGACATCTGGTTGGCTGCTTACGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000565057.5 |
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| 3UTR CAA 72 bp | GTCAGGACCCCTAAGAGTTTTCAGACTTCCAAAGTTTaGGAGTTCCGTAAGCAGCCAACCAGATGTCTAATA | + |
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Preference number: 4 (lower is better) Translates to: VRTPKSFQTSKV*EFRKQPTRCLI Trigger: TATTAGACATCTGGTTGGCTGCTTACGGAACTCCAAAACTTTGGAAGTCTGAAAACTCTTAGGGGTCCTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000565057.5 |
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| CDS-3UTR GCA 90 bp | TTCCGTAAGCAGCCAACCAGATGTCTAATACCAGAGGGCCCATCTAGTAAACACTTTCTGAATCCAAAATaGACTCTTATGTATTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: FRKQPTRCLIPEGPSSKHFLNPK*TLMYCS Trigger: GCTGCAATACATAAGAGTGCATTTTGGATTCAGAAA...GTGTTTACTAGATGGGCCCTCTGGTATTAGACATCTGGTTGGCTGCTTACGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000565057.5 |
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| CDS CCA 90 bp | GTCCTGTCCCCTACTAGCTCCCAGCAAGGCCCGCGGAGGGTGACATaGGGTCAGGGGGCCGCTGCCCGAGGCACCAGGGCATGGGCGACT | + |
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Preference number: 5 (lower is better) Translates to: VLSPTSSQQGPRRVT*GQGAAARGTRAWAT Trigger: AGTCGCCCATGCCCTGGTGCCTCGGGCAGCGGCCCCCTGACCCCATGTCACCCTCCGCGGGCCTTGCTGGGAGCTAGTAGGGGACAGGAC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000568455.1 |
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| CDS TCA 90 bp | AAACCAAGAGCCAGTGGGGAAGATAAGGAGTCCAAGGCCTCAACCTaGGGAAACAGTGACTGCCCCACTTGCTGCTTTGCTCCTCAAGGG | + |
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Preference number: 5 (lower is better) Translates to: KPRASGEDKESKAST*GNSDCPTCCFAPQG Trigger: CCCTTGAGGAGCAAAGCAGCAAGTGGGGCAGTCACTGTTTCCTCAGGTTGAGGCCTTGGACTCCTTATCTTCCCCACTGGCTCTTGGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000565985.1 |
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| CDS GCA 90 bp | AGTTGGACCAGCTCCAGAGTAAGACTAGTAACACCTGGATCCCTATaGAAGCTCTGCCCCGTGACTGTACTCTCTGAGATGAGAGGAAGT | + |
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Preference number: 5 (lower is better) Translates to: SWTSSRVRLVTPGSL*KLCPVTVLSEMRGS Trigger: ACTTCCTCTCATCTCAGAGAGTACAGTCACGGGGCAGAGCTTGCATAGGGATCCAGGTGTTACTAGTCTTACTCTGGAGCTGGTCCAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000565985.1 |
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| CDS CCA 90 bp | CTCCCAAGTAAATCCTTTAAAGCAGCCAGCTCCTTCAGGGGGCTTTaGCTGGCTAACACATGGATGCCTCTTAAATGCCAAGGACAAGGG | + |
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Preference number: 5 (lower is better) Translates to: LPSKSFKAASSFRGL*LANTWMPLKCQGQG Trigger: CCCTTGTCCTTGGCATTTAAGAGGCATCCATGTGTTAGCCAGCCAAAGCCCCCTGAAGGAGCTGGCTGCTTTAAAGGATTTACTTGGGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000565985.1 |
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| CDS-3UTR CAA 90 bp | CCTGGAGCCCCTGATGTCAGGGAGCATAAAATCCAGATTTCTAGTCAGGACCCCCAGACTTCCAAAGTTTaGGAGTTCCGTAAGCAGCCA | + |
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Preference number: 5 (lower is better) Translates to: PGAPDVREHKIQISSQDPQTSKV*EFRKQP Trigger: TGGCTGCTTACGGAACTCCAAAACTTTGGAAGTCTG...GGGGTCCTGACTAGAAATCTGGATTTTATGCTCCCTGACATCAGGGGCTCCAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000565057.5 |
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| CDS GCA 90 bp | AGCTCCAGAGTAAGACTAGTAACACCTGGATCCCTATGCAAGCTCTaGCCCGTGACTGTACTCTCTGAGATGAGAGGAAGTGCAAATGTG | + |
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Preference number: 5 (lower is better) Translates to: SSRVRLVTPGSLCKL*PVTVLSEMRGSANV Trigger: CACATTTGCACTTCCTCTCATCTCAGAGAGTACAGTCACGGGGCAGAGCTTGCATAGGGATCCAGGTGTTACTAGTCTTACTCTGGAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000565985.1 |
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| CDS GCA 90 bp | GTAGTTTGGGTTCATTCTCATGGAATCTCCCCAGCTAAACCGCTGTaGCCCAGGGTGCCCACATGGTGTATCAACATCATCAAAGAGAAG | + |
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Preference number: 5 (lower is better) Translates to: VVWVHSHGISPAKPL*PRVPTWCINIIKEK Trigger: CTTCTCTTTGATGATGTTGATACACCATGTGGGCACCCTGGGGCACAGCGGTTTAGCTGGGGAGATTCCATGAGAATGAACCCAAACTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000565985.1 |
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| CDS TCA 90 bp | ACTGTACTCTCTGAGATGAGAGGAAGTGCAAATGTGTTAAGACCATaGGTGAAGGGATCAACCAGAAACAGTGGTAAGATGCTCAGTCTG | + |
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Preference number: 5 (lower is better) Translates to: TVLSEMRGSANVLRP*VKGSTRNSGKMLSL Trigger: CAGACTGAGCATCTTACCACTGTTTCTGGTTGATCCCTTCACTCATGGTCTTAACACATTTGCACTTCCTCTCATCTCAGAGAGTACAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000565985.1 |
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| CDS TCA 90 bp | GTCATTGAAAATTGGAGTCCAGGTTTCAGGAGAAAAAGGATGGCCTaGGGACAGGAATTTAGTAAGACTTCAGGTGTCAGTACCTGCTGT | + |
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Preference number: 5 (lower is better) Translates to: VIENWSPGFRRKRMA*GQEFSKTSGVSTCC Trigger: ACAGCAGGTACTGACACCTGAAGTCTTACTAAATTCCTGTCCTCAGGCCATCCTTTTTCTCCTGAAACCTGGACTCCAATTTTCAATGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000565985.1 |
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| CDS CCA 90 bp | GAAGTTATTTTCCTCACACTTAATGCAAAAAGCTCTAAATGTATCTaGGATCCAAAGAAGCCTGCCCAACCTCCCAAAGAACCCTCCAAA | + |
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Preference number: 5 (lower is better) Translates to: EVIFLTLNAKSSKCI*DPKKPAQPPKEPSK Trigger: TTTGGAGGGTTCTTTGGGAGGTTGGGCAGGCTTCTTTGGATCCCAGATACATTTAGAGCTTTTTGCATTAAGTGTGAGGAAAATAACTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000565985.1 |
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| CDS CCA 72 bp | CCTACTAGCTCCCAGCAAGGCCCGCGGAGGGTGACATaGGGTCAGGGGGCCGCTGCCCGAGGCACCAGGGCA | + |
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Preference number: 6 (lower is better) Translates to: PTSSQQGPRRVT*GQGAAARGTRA Trigger: TGCCCTGGTGCCTCGGGCAGCGGCCCCCTGACCCCATGTCACCCTCCGCGGGCCTTGCTGGGAGCTAGTAGG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000568455.1 |
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| CDS GCA 72 bp | GTTCATTCTCATGGAATCTCCCCAGCTAAACCGCTGTaGCCCAGGGTGCCCACATGGTGTATCAACATCATC | + |
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Preference number: 6 (lower is better) Translates to: VHSHGISPAKPL*PRVPTWCINII Trigger: GATGATGTTGATACACCATGTGGGCACCCTGGGGCACAGCGGTTTAGCTGGGGAGATTCCATGAGAATGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000565985.1 |
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| CDS CCA 72 bp | GAGTTGGACCAGCTCCAGAGTAAGACTAGTAACACCTaGATCCCTATGCAAGCTCTGCCCCGTGACTGTACT | + |
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Preference number: 6 (lower is better) Translates to: ELDQLQSKTSNT*IPMQALPRDCT Trigger: AGTACAGTCACGGGGCAGAGCTTGCATAGGGATCCAGGTGTTACTAGTCTTACTCTGGAGCTGGTCCAACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000565985.1 |
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| CDS TCA 72 bp | GTGACTGCCCCACTTGCTGCTTTGCTCCTCAAGGGCTaGGTGGAACCTCCATGTAAACATGGACAAATACCA | + |
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Preference number: 6 (lower is better) Translates to: VTAPLAALLLKG*VEPPCKHGQIP Trigger: TGGTATTTGTCCATGTTTACATGGAGGTTCCACTCAGCCCTTGAGGAGCAAAGCAGCAAGTGGGGCAGTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000565985.1 |
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| CDS GCA 72 bp | AGCTCCAGAGTAAGACTAGTAACACCTGGATCCCTATaGAAGCTCTGCCCCGTGACTGTACTCTCTGAGATG | + |
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Preference number: 6 (lower is better) Translates to: SSRVRLVTPGSL*KLCPVTVLSEM Trigger: CATCTCAGAGAGTACAGTCACGGGGCAGAGCTTGCATAGGGATCCAGGTGTTACTAGTCTTACTCTGGAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000565985.1 |
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| CDS GCA 72 bp | ATGGAATCTCCCCAGCTAAACCGCTGTGCCCCAGGGTaGCCACATGGTGTATCAACATCATCAAAGAGAAGT | + |
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Preference number: 6 (lower is better) Translates to: MESPQLNRCAPG*PHGVSTSSKRS Trigger: ACTTCTCTTTGATGATGTTGATACACCATGTGGGCACCCTGGGGCACAGCGGTTTAGCTGGGGAGATTCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000565985.1 |
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| CDS GCA 72 bp | GTAAGACTAGTAACACCTGGATCCCTATGCAAGCTCTaGCCCGTGACTGTACTCTCTGAGATGAGAGGAAGT | + |
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Preference number: 6 (lower is better) Translates to: VRLVTPGSLCKL*PVTVLSEMRGS Trigger: ACTTCCTCTCATCTCAGAGAGTACAGTCACGGGGCAGAGCTTGCATAGGGATCCAGGTGTTACTAGTCTTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000565985.1 |
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| CDS CCA 72 bp | CTGCCCCACTTGCTGCTTTGCTCCTCAAGGGCTGAGTaGAACCTCCATGTAAACATGGACAAATACCACATT | + |
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Preference number: 6 (lower is better) Translates to: LPHLLLCSSRAE*NLHVNMDKYHI Trigger: AATGTGGTATTTGTCCATGTTTACATGGAGGTTCCACTCAGCCCTTGAGGAGCAAAGCAGCAAGTGGGGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000565985.1 |
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| CDS CAA 90 bp | ACTGCGCAGTGGAGACCTAATCTAGTTCTGTGCCATGAAACTGAGTaGGACCAGCTCCAGAGTAAGACTAGTAACACCTGGATCCCTATG | + |
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Preference number: 6 (lower is better) Translates to: TAQWRPNLVLCHETE*DQLQSKTSNTWIPM Trigger: CATAGGGATCCAGGTGTTACTAGTCTTACTCTGGAGCTGGTCCAACTCAGTTTCATGGCACAGAACTAGATTAGGTCTCCACTGCGCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000565985.1 |
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| CDS TCA 72 bp | ATCCCTATGCAAGCTCTGCCCCGTGACTGTACTCTCTaGGATGAGAGGAAGTGCAAATGTGTTAAGACCATG | + |
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Preference number: 6 (lower is better) Translates to: IPMQALPRDCTL*DERKCKCVKTM Trigger: CATGGTCTTAACACATTTGCACTTCCTCTCATCTCAGAGAGTACAGTCACGGGGCAGAGCTTGCATAGGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000565985.1 |
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| CDS GCA 72 bp | AAACAGACTGCGCAGTGGAGACCTAATCTAGTTCTGTaGCATGAAACTGAGTTGGACCAGCTCCAGAGTAAG | + |
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Preference number: 6 (lower is better) Translates to: KQTAQWRPNLVL*HETELDQLQSK Trigger: CTTACTCTGGAGCTGGTCCAACTCAGTTTCATGGCACAGAACTAGATTAGGTCTCCACTGCGCAGTCTGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000565985.1 |
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| CDS CCA 72 bp | AAATCCTTTAAAGCAGCCAGCTCCTTCAGGGGGCTTTaGCTGGCTAACACATGGATGCCTCTTAAATGCCAA | + |
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Preference number: 6 (lower is better) Translates to: KSFKAASSFRGL*LANTWMPLKCQ Trigger: TTGGCATTTAAGAGGCATCCATGTGTTAGCCAGCCAAAGCCCCCTGAAGGAGCTGGCTGCTTTAAAGGATTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000565985.1 |
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| CDS CAA 72 bp | TGGAGACCTAATCTAGTTCTGTGCCATGAAACTGAGTaGGACCAGCTCCAGAGTAAGACTAGTAACACCTGG | + |
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Preference number: 6 (lower is better) Translates to: WRPNLVLCHETE*DQLQSKTSNTW Trigger: CCAGGTGTTACTAGTCTTACTCTGGAGCTGGTCCAACTCAGTTTCATGGCACAGAACTAGATTAGGTCTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000565985.1 |
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| CDS CCA 72 bp | TTCCTCACACTTAATGCAAAAAGCTCTAAATGTATCTaGGATCCAAAGAAGCCTGCCCAACCTCCCAAAGAA | + |
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Preference number: 6 (lower is better) Translates to: FLTLNAKSSKCI*DPKKPAQPPKE Trigger: TTCTTTGGGAGGTTGGGCAGGCTTCTTTGGATCCCAGATACATTTAGAGCTTTTTGCATTAAGTGTGAGGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000565985.1 |
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