Pregenerated sensors for GABARAPL1 (Homo sapiens)
Ensembl gene IDs: ENSG00000139112Ensembl transcript IDs: ENST00000266458.10, ENST00000421801.6, ENST00000537201.5, ENST00000539170.5, ENST00000539408.5, ENST00000540424.5, ENST00000541453.1, ENST00000541960.5, ENST00000542722.5, ENST00000545047.5, ENST00000545859.5, ENST00000629504.1
Found 174 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTGGTCCCCCTACCACTTAAGCCATATTCTGCCCTCCAATTCGGCTaGGCAGCCTGCATTAGAGAAACACCAGGCAAGTGGGCGGGGGAG | + |
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Preference number: 1 (lower is better) Translates to: LVPLPLKPYSALQFG*AACIRETPGKWAGE Trigger: CTCCCCCGCCCACTTGCCTGGTGTTTCTCTAATGCAGGCTGCGCAGCCGAATTGGAGGGCAGAATATGGCTTAAGTGGTAGGGGGACCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000540424.5 ENST00000541960.5 ENST00000542722.5 |
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| 3UTR CCA 90 bp | CCCACACAAGCCCCGGAGCCTAGAACGATGAGGCAAGAGGGCTGTTaGGCAGAGAACGTGACCTTGTTTTCCAGGCCAGGACTGTCTTGT | + |
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Preference number: 1 (lower is better) Translates to: PTQAPEPRTMRQEGC*AENVTLFSRPGLSC Trigger: ACAAGACAGTCCTGGCCTGGAAAACAAGGTCACGTTCTCTGCCCAACAGCCCTCTTGCCTCATCGTTCTAGGCTCCGGGGCTTGTGTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000541960.5 |
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| 3UTR GCA 90 bp | CTACCACTTAAGCCATATTCTGCCCTCCAATTCGGCTGCGCAGCCTaGATTAGAGAAACACCAGGCAAGTGGGCGGGGGAGGGGGTAATG | + |
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Preference number: 1 (lower is better) Translates to: LPLKPYSALQFGCAA*IRETPGKWAGEGVM Trigger: CATTACCCCCTCCCCCGCCCACTTGCCTGGTGTTTCTCTAATGCAGGCTGCGCAGCCGAATTGGAGGGCAGAATATGGCTTAAGTGGTAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000540424.5 ENST00000541960.5 ENST00000542722.5 |
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| 3UTR GCA 90 bp | CTTCTCAGATGTGTTATCAACGCATCTAGAACAAGGGCTAGAGGATaGCAGACTGCACTGGACGGCATCCAGTATTGTGCAACCAGAACC | + |
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Preference number: 1 (lower is better) Translates to: LLRCVINASRTRARG*QTALDGIQYCATRT Trigger: GGTTCTGGTTGCACAATACTGGATGCCGTCCAGTGCAGTCTGGCATCCTCTAGCCCTTGTTCTAGATGCGTTGATAACACATCTGAGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000545047.5 |
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| 3UTR CCA 90 bp | AAAGTCAACTTCATTAAAGGAGAACCAGCCAAGGCAGAAATCGACTaGGTTTGCGCAAACCTCACCGCACAGCACAATGTCCCTGCGTTC | + |
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Preference number: 1 (lower is better) Translates to: KVNFIKGEPAKAEID*VCANLTAQHNVPAF Trigger: GAACGCAGGGACATTGTGCTGTGCGGTGAGGTTTGCGCAAACCCAGTCGATTTCTGCCTTGGCTGGTTCTCCTTTAATGAAGTTGACTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000541960.5 |
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| 3UTR GCA 90 bp | AACTTCATTAAAGGAGAACCAGCCAAGGCAGAAATCGACTGGGTTTaGGCAAACCTCACCGCACAGCACAATGTCCCTGCGTTCTTAAAG | + |
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Preference number: 1 (lower is better) Translates to: NFIKGEPAKAEIDWV*ANLTAQHNVPAFLK Trigger: CTTTAAGAACGCAGGGACATTGTGCTGTGCGGTGAGGTTTGCGCAAACCCAGTCGATTTCTGCCTTGGCTGGTTCTCCTTTAATGAAGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000541960.5 |
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| 3UTR CCA 90 bp | TTATCAACGCATCTAGAACAAGGGCTAGAGGATGCCAGACTGCACTaGACGGCATCCAGTATTGTGCAACCAGAACCATTACCTCATACA | + |
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Preference number: 1 (lower is better) Translates to: LSTHLEQGLEDARLH*TASSIVQPEPLPHT Trigger: TGTATGAGGTAATGGTTCTGGTTGCACAATACTGGATGCCGTCCAGTGCAGTCTGGCATCCTCTAGCCCTTGTTCTAGATGCGTTGATAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000545047.5 |
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| 3UTR CCA 90 bp | AAAGGAAAAGGGTTACAAGAGGTTTCTACTGCTGGGCTAAGGCCCTaGTGGCTTCTGGTAGCTATAAAACCACGAACGTTAGGTAAGGAT | + |
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Preference number: 1 (lower is better) Translates to: KGKGLQEVSTAGLRP*WLLVAIKPRTLGKD Trigger: ATCCTTACCTAACGTTCGTGGTTTTATAGCTACCAGAAGCCACCAGGGCCTTAGCCCAGCAGTAGAAACCTCTTGTAACCCTTTTCCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000541960.5 |
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| 3UTR GCA 90 bp | CCAGCTCAACCACAGATCAGCAATGTGAAACCTTTAGGAAGTTACTaGATTTCTTTGTGCTTTGAATACTCCATCTGTAGAACGGGTAAT | + |
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Preference number: 1 (lower is better) Translates to: PAQPQISNVKPLGSY*ISLCFEYSICRTGN Trigger: ATTACCCGTTCTACAGATGGAGTATTCAAAGCACAAAGAAATGCAGTAACTTCCTAAAGGTTTCACATTGCTGATCTGTGGTTGAGCTGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000541960.5 |
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| 3UTR GCA 90 bp | CAGATCAGCAATGTGAAACCTTTAGGAAGTTACTGCATTTCTTTGTaGTTTGAATACTCCATCTGTAGAACGGGTAATCGTGTAAGGAAG | + |
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Preference number: 1 (lower is better) Translates to: QISNVKPLGSYCISL*FEYSICRTGNRVRK Trigger: CTTCCTTACACGATTACCCGTTCTACAGATGGAGTATTCAAAGCACAAAGAAATGCAGTAACTTCCTAAAGGTTTCACATTGCTGATCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000541960.5 |
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| 3UTR TCA 90 bp | CAGCAATGTGAAACCTTTAGGAAGTTACTGCATTTCTTTGTGCTTTaGATACTCCATCTGAAGATAAAGAGCACAATTTTAAAATCTCCG | + |
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Preference number: 1 (lower is better) Translates to: QQCETFRKLLHFFVL*ILHLKIKSTILKSP Trigger: CGGAGATTTTAAAATTGTGCTCTTTATCTTCAGATGGAGTATTCAAAGCACAAAGAAATGCAGTAACTTCCTAAAGGTTTCACATTGCTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000540424.5 |
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| 3UTR-3UTR TCA 90 bp | TCCAATTCGGCTGCGCAGCCTGCATTAGAGAAACACCAGGCAAGTGGGCGGGGGCCGTGTGTGGGTTGCTaGGTCACTGAAGACGGCGGC | + |
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Preference number: 2 (lower is better) Translates to: SNSAAQPALEKHQASGRGPCVGC*VTEDGG Trigger: GCCGCCGTCTTCAGTGACTCAGCAACCCACACACGG...CCCCCGCCCACTTGCCTGGTGTTTCTCTAATGCAGGCTGCGCAGCCGAATTGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000541960.5 |
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| 3UTR-3UTR TCA 90 bp | CCCTCCAATTCGGCTGCGCAGCCTGCATTAGAGAAACACCAGGCAAGTGGGCGGCGGAGCCTAGAACGATaGGGCAAGAGGGCTGTTGGG | + |
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Preference number: 2 (lower is better) Translates to: PSNSAAQPALEKHQASGRRSLER*GKRAVG Trigger: CCCAACAGCCCTCTTGCCTCATCGTTCTAGGCTCCG...CCGCCCACTTGCCTGGTGTTTCTCTAATGCAGGCTGCGCAGCCGAATTGGAGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000541960.5 |
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| 3UTR-3UTR CCA 90 bp | CCCTCCAATTCGGCTGCGCAGCCTGCATTAGAGAAACACCAGGCAAGTGGGCGGGAAACACCAGGCAAGTaGGCGGGGGAGGGGGTAATG | + |
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Preference number: 2 (lower is better) Translates to: PSNSAAQPALEKHQASGRETPGK*AGEGVM Trigger: CATTACCCCCTCCCCCGCCCACTTGCCTGGTGTTTC...CCGCCCACTTGCCTGGTGTTTCTCTAATGCAGGCTGCGCAGCCGAATTGGAGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000540424.5 ENST00000541960.5 ENST00000542722.5 |
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| 3UTR-3UTR TCA 90 bp | GAGGTTTCTACTGCTGGGCTAAGGCCCTGGTGGCTTCTGGTAGCTATAAAACCAGGGTTGCTGAGTCACTaGAGACGGCGGCTCGGCCCC | + |
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Preference number: 2 (lower is better) Translates to: EVSTAGLRPWWLLVAIKPGLLSH*RRRLGP Trigger: GGGGCCGAGCCGCCGTCTTCAGTGACTCAGCAACCC...TGGTTTTATAGCTACCAGAAGCCACCAGGGCCTTAGCCCAGCAGTAGAAACCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000541960.5 |
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| 3UTR-3UTR CCA 90 bp | CAACAGCTGCTGGTCCCCCTACCACTTAAGCCATATTCTGCCCTCCAATTCGGCTCTGTCTCCTTGCGGTaGGAGCCACCCTCTTTCCCC | + |
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Preference number: 2 (lower is better) Translates to: QQLLVPLPLKPYSALQFGSVSLR*EPPSFP Trigger: GGGGAAAGAGGGTGGCTCCCACCGCAAGGAGACAGA...GCCGAATTGGAGGGCAGAATATGGCTTAAGTGGTAGGGGGACCAGCAGCTGTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000540424.5 ENST00000541960.5 ENST00000542722.5 |
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| 3UTR-3UTR GCA 90 bp | CCCTCCAATTCGGCTGCGCAGCCTGCATTAGAGAAACACCAGGCAAGTGGGCGGAAAACGTCTCAGTCCTaGCTTATCGCGACCAGGTAC | + |
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Preference number: 2 (lower is better) Translates to: PSNSAAQPALEKHQASGRKTSQS*LIATRY Trigger: GTACCTGGTCGCGATAAGGCAGGACTGAGACGTTTT...CCGCCCACTTGCCTGGTGTTTCTCTAATGCAGGCTGCGCAGCCGAATTGGAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000540424.5 ENST00000541960.5 ENST00000542722.5 |
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| 3UTR-3UTR GCA 90 bp | CTGCTGGTCCCCCTACCACTTAAGCCATATTCTGCCCTCCAATTCGGCTGCGCAAAAACGTCTCAGTCCTaGCTTATCGCGACCAGGTAC | + |
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Preference number: 2 (lower is better) Translates to: LLVPLPLKPYSALQFGCAKTSQS*LIATRY Trigger: GTACCTGGTCGCGATAAGGCAGGACTGAGACGTTTT...TGCGCAGCCGAATTGGAGGGCAGAATATGGCTTAAGTGGTAGGGGGACCAGCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENST00000537201.5 ENST00000540424.5 ENST00000541960.5 ENST00000542722.5 |
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| 3UTR-3UTR GCA 90 bp | TCCCCCTACCACTTAAGCCATATTCTGCCCTCCAATTCGGCTGCGCAGCCTGCACCAAAATCCAACAGCTaGTGGTCCCCCTACCACTTA | + |
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Preference number: 2 (lower is better) Translates to: SPYHLSHILPSNSAAQPAPKSNS*WSPYHL Trigger: TAAGTGGTAGGGGGACCAGCAGCTGTTGGATTTTGG...TGCAGGCTGCGCAGCCGAATTGGAGGGCAGAATATGGCTTAAGTGGTAGGGGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENST00000540424.5 ENST00000541960.5 ENST00000542722.5 |
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| 3UTR-3UTR GCA 90 bp | CTCCAATTCGGCTGCGCAGCTGCCTGCGGTAGTTTTAACTACTTAAGCCGGTGTAAAACGTCTCAGTCCTaGCTTATCGCGACCAGGTAC | + |
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Preference number: 2 (lower is better) Translates to: LQFGCAAACGSFNYLSRCKTSQS*LIATRY Trigger: GTACCTGGTCGCGATAAGGCAGGACTGAGACGTTTT...ACACCGGCTTAAGTAGTTAAAACTACCGCAGGCAGCTGCGCAGCCGAATTGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000537201.5 ENST00000539408.5 |
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| 3UTR-3UTR GCA 90 bp | GGAGCCTTCTCTACAATCACCCGAGAGCTCCACAGTCCTTCAGACAGGGTTGGAACAGCACAATGTCCCTaGGTTCTTAAAGGCAGCCAA | + |
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Preference number: 2 (lower is better) Translates to: GAFSTITRELHSPSDRVGTAQCP*VLKGSQ Trigger: TTGGCTGCCTTTAAGAACGCAGGGACATTGTGCTGT...TCCAACCCTGTCTGAAGGACTGTGGAGCTCTCGGGTGATTGTAGAGAAGGCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000541960.5 |
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| 3UTR-3UTR CCA 90 bp | CCACAGTCCTTCAGACAGGGTTGGAATTCCAGCTCAACCACAGATCAGCAATGTAGGCAAGAGGGCTGTTaGGCAGAGAACGTGACCTTG | + |
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Preference number: 2 (lower is better) Translates to: PQSFRQGWNSSSTTDQQCRQEGC*AENVTL Trigger: CAAGGTCACGTTCTCTGCCCAACAGCCCTCTTGCCT...ACATTGCTGATCTGTGGTTGAGCTGGAATTCCAACCCTGTCTGAAGGACTGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000541960.5 |
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| 3UTR-3UTR TCA 90 bp | GAGGCAAGAGGGCTGTTGGGCAGAGAACGTGACCTTGTTTTCCAGGCCAGGACTCCAAGACCAATGATATaGGAGCCAAAGTCAACTTCA | + |
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Preference number: 2 (lower is better) Translates to: EARGLLGRERDLVFQARTPRPMI*EPKSTS Trigger: TGAAGTTGACTTTGGCTCTCATATCATTGGTCTTGG...AGTCCTGGCCTGGAAAACAAGGTCACGTTCTCTGCCCAACAGCCCTCTTGCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000541960.5 |
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| 3UTR-3UTR GCA 90 bp | CATATTCTGCCCTCCAATTCGGCTGCGCAGCTGCCTGCGGTAGTTTTAACTACTAAAACGTCTCAGTCCTaGCTTATCGCGACCAGGTAC | + |
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Preference number: 2 (lower is better) Translates to: HILPSNSAAQLPAVVLTTKTSQS*LIATRY Trigger: GTACCTGGTCGCGATAAGGCAGGACTGAGACGTTTT...AGTAGTTAAAACTACCGCAGGCAGCTGCGCAGCCGAATTGGAGGGCAGAATATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000537201.5 ENST00000539408.5 |
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| 3UTR-3UTR TCA 90 bp | TCCCCCTACCACTTAAGCCATATTCTGCCCTCCAATTCGGCTGCGCAGCCTGCATATCAATTGAGCATGTaGAAATGTGATGACGGTGTG | + |
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Preference number: 2 (lower is better) Translates to: SPYHLSHILPSNSAAQPAYQLSM*KCDDGV Trigger: CACACCGTCATCACATTTTCACATGCTCAATTGATA...TGCAGGCTGCGCAGCCGAATTGGAGGGCAGAATATGGCTTAAGTGGTAGGGGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000540424.5 ENST00000541960.5 ENST00000542722.5 |
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| 3UTR-3UTR TCA 90 bp | GAGGCAAGAGGGCTGTTGGGCAGAGAACGTGACCTTGTTTTCCAGGCCAGGACTCTCCTGACCCATCTATaGAACTGCACAACAATTAAA | + |
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Preference number: 2 (lower is better) Translates to: EARGLLGRERDLVFQARTLLTHL*NCTTIK Trigger: TTTAATTGTTGTGCAGTTTCATAGATGGGTCAGGAG...AGTCCTGGCCTGGAAAACAAGGTCACGTTCTCTGCCCAACAGCCCTCTTGCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000541960.5 |
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| 3UTR-3UTR GCA 90 bp | CCACAGTCCTTCAGACAGGGTTGGAATTCCAGCTCAACCACAGATCAGCAATGTAAAACGTCTCAGTCCTaGCTTATCGCGACCAGGTAC | + |
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Preference number: 2 (lower is better) Translates to: PQSFRQGWNSSSTTDQQCKTSQS*LIATRY Trigger: GTACCTGGTCGCGATAAGGCAGGACTGAGACGTTTT...ACATTGCTGATCTGTGGTTGAGCTGGAATTCCAACCCTGTCTGAAGGACTGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000540424.5 ENST00000541960.5 |
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| 3UTR-3UTR GCA 90 bp | CAGGGTTGGAATTCCAGCTCAACCACAGATCAGCAATGTGAAACCTTTAGGAAGTTCGGCTGCGCAGCCTaGATTAGAGAAACACCAGGC | + |
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Preference number: 2 (lower is better) Translates to: QGWNSSSTTDQQCETFRKFGCAA*IRETPG Trigger: GCCTGGTGTTTCTCTAATGCAGGCTGCGCAGCCGAA...CTTCCTAAAGGTTTCACATTGCTGATCTGTGGTTGAGCTGGAATTCCAACCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000540424.5 ENST00000541960.5 |
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| 3UTR-3UTR GCA 90 bp | CAGGGTTGGAATTCCAGCTCAACCACAGATCAGCAATGTGAAACCTTTAGGAAGGAAATCGACTGGGTTTaGGCAAACCTCACCGCACAG | + |
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Preference number: 2 (lower is better) Translates to: QGWNSSSTTDQQCETFRKEIDWV*ANLTAQ Trigger: CTGTGCGGTGAGGTTTGCGCAAACCCAGTCGATTTC...CTTCCTAAAGGTTTCACATTGCTGATCTGTGGTTGAGCTGGAATTCCAACCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000541960.5 |
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| 3UTR-3UTR TCA 90 bp | CCACAGTCCTTCAGACAGGGTTGGAATTCCAGCTCAACCACAGATCAGCAATGTTTACTGAATAGCTTCTaGACCTTTTCGTCCCAAGAC | + |
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Preference number: 2 (lower is better) Translates to: PQSFRQGWNSSSTTDQQCLLNSF*TFSSQD Trigger: GTCTTGGGACGAAAAGGTTCAGAAGCTATTCAGTAA...ACATTGCTGATCTGTGGTTGAGCTGGAATTCCAACCCTGTCTGAAGGACTGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000541960.5 |
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| 3UTR-3UTR CCA 90 bp | CCACAGTCCTTCAGACAGGGTTGGAATTCCAGCTCAACCACAGATCAGCAATGTCCTTTTTGTAATTCCTaGGGAATGAAGAGCCCTAAT | + |
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Preference number: 2 (lower is better) Translates to: PQSFRQGWNSSSTTDQQCPFCNS*GMKSPN Trigger: ATTAGGGCTCTTCATTCCCCAGGAATTACAAAAAGG...ACATTGCTGATCTGTGGTTGAGCTGGAATTCCAACCCTGTCTGAAGGACTGTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000541960.5 |
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| 3UTR-3UTR CCA 90 bp | CCACAGTCCTTCAGACAGGGTTGGAATTCCAGCTCAACCACAGATCAGCAATGTTGGTATCACCAGAACTaGGCAAAATTTTCAGGTATC | + |
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Preference number: 2 (lower is better) Translates to: PQSFRQGWNSSSTTDQQCWYHQN*AKFSGI Trigger: GATACCTGAAAATTTTGCCCAGTTCTGGTGATACCA...ACATTGCTGATCTGTGGTTGAGCTGGAATTCCAACCCTGTCTGAAGGACTGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000541960.5 |
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| 3UTR-3UTR GCA 90 bp | ATCAGCAATGTGAAACCTTTAGGAAGTTACTGCATTTCTTTGTGCTTTGAATACAGGGGCCCTATTTTGTaGACCGCAACCCACACACGG | + |
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Preference number: 2 (lower is better) Translates to: ISNVKPLGSYCISLCFEYRGPIL*TATHTR Trigger: CCGTGTGTGGGTTGCGGTGCACAAAATAGGGCCCCT...GTATTCAAAGCACAAAGAAATGCAGTAACTTCCTAAAGGTTTCACATTGCTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000541960.5 |
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| 3UTR-3UTR TCA 90 bp | CCACAGATCAGCAATGTGAAACCTTTAGGAAGTTACTGCATTTCTTTGTGCTTTCTCCTGACCCATCTATaGAACTGCACAACAATTAAA | + |
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Preference number: 2 (lower is better) Translates to: PQISNVKPLGSYCISLCFLLTHL*NCTTIK Trigger: TTTAATTGTTGTGCAGTTTCATAGATGGGTCAGGAG...AAAGCACAAAGAAATGCAGTAACTTCCTAAAGGTTTCACATTGCTGATCTGTGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000540424.5 ENST00000541960.5 |
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| 3UTR-3UTR GCA 90 bp | CCACAGATCAGCAATGTGAAACCTTTAGGAAGTTACTGCATTTCTTTGTGCTTTTTCCTACTCACTGCCTaGGGTAGTTTTAACTACTTA | + |
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Preference number: 2 (lower is better) Translates to: PQISNVKPLGSYCISLCFFLLTA*GSFNYL Trigger: TAAGTAGTTAAAACTACCGCAGGCAGTGAGTAGGAA...AAAGCACAAAGAAATGCAGTAACTTCCTAAAGGTTTCACATTGCTGATCTGTGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000540424.5 ENST00000541960.5 |
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| 3UTR-3UTR GCA 90 bp | ATCAGCAATGTGAAACCTTTAGGAAGTTACTGCATTTCTTTGTGCTTTGAATACTTCCTACTCACTGCCTaGGGTAGTTTTAACTACTTA | + |
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Preference number: 2 (lower is better) Translates to: ISNVKPLGSYCISLCFEYFLLTA*GSFNYL Trigger: TAAGTAGTTAAAACTACCGCAGGCAGTGAGTAGGAA...GTATTCAAAGCACAAAGAAATGCAGTAACTTCCTAAAGGTTTCACATTGCTGAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000540424.5 ENST00000541960.5 |
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| 3UTR CCA 72 bp | CACAATGTCCCTGCGTTCTTAAAGGCAGCCAATCCATaGCCCCGATCTAACCAGTCTCGCCCACAGGGGCCC | + |
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Preference number: 3 (lower is better) Translates to: HNVPAFLKAANP*PRSNQSRPQGP Trigger: GGGCCCCTGTGGGCGAGACTGGTTAGATCGGGGCCATGGATTGGCTGCCTTTAAGAACGCAGGGACATTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000541960.5 |
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| 3UTR CCA 72 bp | GCCCCGGAGCCTAGAACGATGAGGCAAGAGGGCTGTTaGGCAGAGAACGTGACCTTGTTTTCCAGGCCAGGA | + |
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Preference number: 3 (lower is better) Translates to: APEPRTMRQEGC*AENVTLFSRPG Trigger: TCCTGGCCTGGAAAACAAGGTCACGTTCTCTGCCCAACAGCCCTCTTGCCTCATCGTTCTAGGCTCCGGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000541960.5 |
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| 3UTR GCA 72 bp | AAGCCATATTCTGCCCTCCAATTCGGCTGCGCAGCCTaGATTAGAGAAACACCAGGCAAGTGGGCGGGGGAG | + |
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Preference number: 3 (lower is better) Translates to: KPYSALQFGCAA*IRETPGKWAGE Trigger: CTCCCCCGCCCACTTGCCTGGTGTTTCTCTAATGCAGGCTGCGCAGCCGAATTGGAGGGCAGAATATGGCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000540424.5 ENST00000541960.5 ENST00000542722.5 |
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| 3UTR GCA 72 bp | GGTTTGCGCAAACCTCACCGCACAGCACAATGTCCCTaGGTTCTTAAAGGCAGCCAATCCATGGCCCCGATC | + |
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Preference number: 3 (lower is better) Translates to: GLRKPHRTAQCP*VLKGSQSMAPI Trigger: GATCGGGGCCATGGATTGGCTGCCTTTAAGAACGCAGGGACATTGTGCTGTGCGGTGAGGTTTGCGCAAACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000541960.5 |
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| 3UTR GCA 72 bp | AAAGGAGAACCAGCCAAGGCAGAAATCGACTGGGTTTaGGCAAACCTCACCGCACAGCACAATGTCCCTGCG | + |
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Preference number: 3 (lower is better) Translates to: KGEPAKAEIDWV*ANLTAQHNVPA Trigger: CGCAGGGACATTGTGCTGTGCGGTGAGGTTTGCGCAAACCCAGTCGATTTCTGCCTTGGCTGGTTCTCCTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000541960.5 |
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| 3UTR-3UTR CAA 90 bp | CAGGGTTGGAATTCCAGCTCAACCACAGATCAGCAATGTGAAACCTTTAGGAAGCAGGCCAGGACTGTCTaGTGCTCCCCTAACCCCCTG | + |
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Preference number: 3 (lower is better) Translates to: QGWNSSSTTDQQCETFRKQARTV*CSPNPL Trigger: CAGGGGGTTAGGGGAGCACAAGACAGTCCTGGCCTG...CTTCCTAAAGGTTTCACATTGCTGATCTGTGGTTGAGCTGGAATTCCAACCCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000541960.5 |
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| 3UTR GCA 72 bp | CTACCACTTAAGCCATATTCTGCCCTCCAATTCGGCTaGGCAGCCTGCATTAGAGAAACACCAGGCAAGTGG | + |
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Preference number: 3 (lower is better) Translates to: LPLKPYSALQFG*AACIRETPGKW Trigger: CCACTTGCCTGGTGTTTCTCTAATGCAGGCTGCGCAGCCGAATTGGAGGGCAGAATATGGCTTAAGTGGTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000540424.5 ENST00000541960.5 ENST00000542722.5 |
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| 3UTR GCA 72 bp | AGGATGCCAGACTGCACTGGACGGCATCCAGTATTGTaGAACCAGAACCATTACCTCATACAGTTGGCCCAT | + |
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Preference number: 3 (lower is better) Translates to: RMPDCTGRHPVL*NQNHYLIQLAH Trigger: ATGGGCCAACTGTATGAGGTAATGGTTCTGGTTGCACAATACTGGATGCCGTCCAGTGCAGTCTGGCATCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000545047.5 |
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| 3UTR GCA 72 bp | TGTGTTATCAACGCATCTAGAACAAGGGCTAGAGGATaGCAGACTGCACTGGACGGCATCCAGTATTGTGCA | + |
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Preference number: 3 (lower is better) Translates to: CVINASRTRARG*QTALDGIQYCA Trigger: TGCACAATACTGGATGCCGTCCAGTGCAGTCTGGCATCCTCTAGCCCTTGTTCTAGATGCGTTGATAACACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000545047.5 |
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| 3UTR CCA 72 bp | TTCATTAAAGGAGAACCAGCCAAGGCAGAAATCGACTaGGTTTGCGCAAACCTCACCGCACAGCACAATGTC | + |
|
Preference number: 3 (lower is better) Translates to: FIKGEPAKAEID*VCANLTAQHNV Trigger: GACATTGTGCTGTGCGGTGAGGTTTGCGCAAACCCAGTCGATTTCTGCCTTGGCTGGTTCTCCTTTAATGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000541960.5 |
||
| 3UTR CCA 72 bp | GGGTTACAAGAGGTTTCTACTGCTGGGCTAAGGCCCTaGTGGCTTCTGGTAGCTATAAAACCACGAACGTTA | + |
|
Preference number: 3 (lower is better) Translates to: GLQEVSTAGLRP*WLLVAIKPRTL Trigger: TAACGTTCGTGGTTTTATAGCTACCAGAAGCCACCAGGGCCTTAGCCCAGCAGTAGAAACCTCTTGTAACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000541960.5 |
||
| 3UTR CCA 72 bp | CATCTAGAACAAGGGCTAGAGGATGCCAGACTGCACTaGACGGCATCCAGTATTGTGCAACCAGAACCATTA | + |
|
Preference number: 3 (lower is better) Translates to: HLEQGLEDARLH*TASSIVQPEPL Trigger: TAATGGTTCTGGTTGCACAATACTGGATGCCGTCCAGTGCAGTCTGGCATCCTCTAGCCCTTGTTCTAGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000545047.5 |
||
| 3UTR CCA 72 bp | TTACAAGAGGTTTCTACTGCTGGGCTAAGGCCCTGGTaGCTTCTGGTAGCTATAAAACCACGAACGTTAGGT | + |
|
Preference number: 3 (lower is better) Translates to: LQEVSTAGLRPW*LLVAIKPRTLG Trigger: ACCTAACGTTCGTGGTTTTATAGCTACCAGAAGCCACCAGGGCCTTAGCCCAGCAGTAGAAACCTCTTGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000541960.5 |
||
| CDS-3UTR TCA 90 bp | CCCTCCAATTCGGCTGCGCAGCCTGCATTAGAGAAACACCAGGCAAGTGGGCGGTGCCTCCTTCGCCGCTaGCCCTGTCCCGCTCCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: PSNSAAQPALEKHQASGRCLLRR*PCPAPS Trigger: TGAGGGAGCGGGACAGGGTCAGCGGCGAAGGAGGCA...CCGCCCACTTGCCTGGTGTTTCTCTAATGCAGGCTGCGCAGCCGAATTGGAGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000540424.5 ENST00000542722.5 |
||
| CDS-3UTR TCA 90 bp | CAACAGCTGCTGGTCCCCCTACCACTTAAGCCATATTCTGCCCTCCAATTCGGCTGCCTCCTTCGCCGCTaGCCCTGTCCCGCTCCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: QQLLVPLPLKPYSALQFGCLLRR*PCPAPS Trigger: TGAGGGAGCGGGACAGGGTCAGCGGCGAAGGAGGCA...GCCGAATTGGAGGGCAGAATATGGCTTAAGTGGTAGGGGGACCAGCAGCTGTTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000537201.5 ENST00000540424.5 ENST00000542722.5 |
||
| CDS-3UTR TCA 90 bp | CCCCTACCACTTAAGCCATATTCTGCCCTCCAATTCGGCTGCGCAGCCTGCATTTGCCTCCTTCGCCGCTaGCCCTGTCCCGCTCCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: PLPLKPYSALQFGCAACICLLRR*PCPAPS Trigger: TGAGGGAGCGGGACAGGGTCAGCGGCGAAGGAGGCA...AATGCAGGCTGCGCAGCCGAATTGGAGGGCAGAATATGGCTTAAGTGGTAGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000540424.5 ENST00000542722.5 |
||
| CDS-3UTR TCA 90 bp | GGAGCCTTCTCTACAATCACCCGAGAGCTCCACAGTCCTTCAGACAGGGTTGGAGGGTTGCTGAGTCACTaGAGACGGCGGCTCGGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: GAFSTITRELHSPSDRVGGLLSH*RRRLGP Trigger: GGGGCCGAGCCGCCGTCTTCAGTGACTCAGCAACCC...TCCAACCCTGTCTGAAGGACTGTGGAGCTCTCGGGTGATTGTAGAGAAGGCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000541960.5 |
||
| CDS-3UTR GCA 90 bp | CTACCACTTAAGCCATATTCTGCCCTCCAATTCGGCTGCGCAGCTGCCTGCGGTGAGCTGTCCCGTGCTTaGACCGTGCCCTCTGCGCGT | + |
|
Preference number: 4 (lower is better) Translates to: LPLKPYSALQFGCAAACGELSRA*TVPSAR Trigger: ACGCGCAGAGGGCACGGTGCAAGCACGGGACAGCTC...ACCGCAGGCAGCTGCGCAGCCGAATTGGAGGGCAGAATATGGCTTAAGTGGTAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000539408.5 |
||
| CDS-3UTR CCA 90 bp | TCCAATTCGGCTGCGCAGCCTGCATTAGAGAAACACCAGGCAAGTGGGCGGGGGGAAACACCAGGCAAGTaGGCGGGGGAGGGGGTAATG | + |
|
Preference number: 4 (lower is better) Translates to: SNSAAQPALEKHQASGRGETPGK*AGEGVM Trigger: CATTACCCCCTCCCCCGCCCACTTGCCTGGTGTTTC...CCCCCGCCCACTTGCCTGGTGTTTCTCTAATGCAGGCTGCGCAGCCGAATTGGA 61% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENST00000540424.5 ENST00000541960.5 ENST00000542722.5 |
||
| CDS-3UTR CCA 90 bp | CAGCTGCTGGTCCCCCTACCACTTAAGCCATATTCTGCCCTCCAATTCGGCTGCCCGTCAGCCCTGAAGTaGGGTTCGGGGCCCAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: QLLVPLPLKPYSALQFGCPSALK*GSGPRH Trigger: ATGCCTGGGCCCCGAACCCCACTTCAGGGCTGACGG...GCAGCCGAATTGGAGGGCAGAATATGGCTTAAGTGGTAGGGGGACCAGCAGCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000541960.5 |
||
| CDS-3UTR TCA 90 bp | TTAAGCCATATTCTGCCCTCCAATTCGGCTGCGCAGCTGCCTGCGGTAGTTTTATGCCTCCTTCGCCGCTaGCCCTGTCCCGCTCCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LSHILPSNSAAQLPAVVLCLLRR*PCPAPS Trigger: TGAGGGAGCGGGACAGGGTCAGCGGCGAAGGAGGCA...TAAAACTACCGCAGGCAGCTGCGCAGCCGAATTGGAGGGCAGAATATGGCTTAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000537201.5 ENST00000539408.5 |
||
| CDS-3UTR GCA 90 bp | CCCTCCAATTCGGCTGCGCAGCCTGCATTAGAGAAACACCAGGCAAGTGGGCGGTTCGGCTGCGCAGCCTaGATTAGAGAAACACCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: PSNSAAQPALEKHQASGRFGCAA*IRETPG Trigger: GCCTGGTGTTTCTCTAATGCAGGCTGCGCAGCCGAA...CCGCCCACTTGCCTGGTGTTTCTCTAATGCAGGCTGCGCAGCCGAATTGGAGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000540424.5 ENST00000541960.5 ENST00000542722.5 |
||
| CDS-3UTR GCA 90 bp | CCCTCCAATTCGGCTGCGCAGCCTGCATTAGAGAAACACCAGGCAAGTGGGCGGGCCCTCCAATTCGGCTaGGCAGCCTGCATTAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: PSNSAAQPALEKHQASGRALQFG*AACIRE Trigger: TTCTCTAATGCAGGCTGCGCAGCCGAATTGGAGGGC...CCGCCCACTTGCCTGGTGTTTCTCTAATGCAGGCTGCGCAGCCGAATTGGAGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000540424.5 ENST00000541960.5 ENST00000542722.5 |
||
| CDS-3UTR GCA 90 bp | CATATTCTGCCCTCCAATTCGGCTGCGCAGCTGCCTGCGGTAGTTTTAACTACTCCCGTGCTTGCACCGTaGCCTCTGCGCGTTCCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: HILPSNSAAQLPAVVLTTPVLAP*PLRVPL Trigger: CAGCGGAACGCGCAGAGGGCACGGTGCAAGCACGGG...AGTAGTTAAAACTACCGCAGGCAGCTGCGCAGCCGAATTGGAGGGCAGAATATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000539408.5 |
||
| CDS-3UTR GCA 90 bp | CACTTAAGCCATATTCTGCCCTCCAATTCGGCTGCGCAGCTGCCTGCGGTAGTTTGCAGAGCTGTCCCGTaGTTGCACCGTGCCCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: HLSHILPSNSAAQLPAVVCRAVP*LHRALC Trigger: GCAGAGGGCACGGTGCAAGCACGGGACAGCTCTGCA...AACTACCGCAGGCAGCTGCGCAGCCGAATTGGAGGGCAGAATATGGCTTAAGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000539408.5 |
||
| CDS-3UTR CCA 90 bp | CTGCTGGTCCCCCTACCACTTAAGCCATATTCTGCCCTCCAATTCGGCTGCGCATCTGTCTCCTTGCGGTaGGAGCCACCCTCTTTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: LLVPLPLKPYSALQFGCASVSLR*EPPSFP Trigger: GGGGAAAGAGGGTGGCTCCCACCGCAAGGAGACAGA...TGCGCAGCCGAATTGGAGGGCAGAATATGGCTTAAGTGGTAGGGGGACCAGCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000540424.5 ENST00000541960.5 ENST00000542722.5 |
||
| CDS-3UTR CCA 90 bp | CAGCTGCTGGTCCCCCTACCACTTAAGCCATATTCTGCCCTCCAATTCGGCTGCGAAACACCAGGCAAGTaGGCGGGGGAGGGGGTAATG | + |
|
Preference number: 4 (lower is better) Translates to: QLLVPLPLKPYSALQFGCETPGK*AGEGVM Trigger: CATTACCCCCTCCCCCGCCCACTTGCCTGGTGTTTC...GCAGCCGAATTGGAGGGCAGAATATGGCTTAAGTGGTAGGGGGACCAGCAGCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENST00000540424.5 ENST00000541960.5 ENST00000542722.5 |
||
| CDS-3UTR CCA 90 bp | TCCAATTCGGCTGCGCAGCCTGCATTAGAGAAACACCAGGCAAGTGGGCGGGGGAGAGGTTTCTACTGCTaGGCTAAGGCCCTGGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SNSAAQPALEKHQASGRGRGFYC*AKALVA Trigger: AGCCACCAGGGCCTTAGCCCAGCAGTAGAAACCTCT...CCCCCGCCCACTTGCCTGGTGTTTCTCTAATGCAGGCTGCGCAGCCGAATTGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000541960.5 |
||
| CDS-3UTR TCA 90 bp | TCCAATTCGGCTGCGCAGCCTGCATTAGAGAAACACCAGGCAAGTGGGCGGGGGCGACCAGGTACCAGGTaGTCAGAAATCAACACGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SNSAAQPALEKHQASGRGRPGTR*SEINTR Trigger: CCTCGTGTTGATTTCTGATCACCTGGTACCTGGTCG...CCCCCGCCCACTTGCCTGGTGTTTCTCTAATGCAGGCTGCGCAGCCGAATTGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000540424.5 ENST00000541960.5 ENST00000542722.5 |
||
| CDS-3UTR TCA 90 bp | TCCCCCTACCACTTAAGCCATATTCTGCCCTCCAATTCGGCTGCGCAGCTGCCTGGCGGGGATCTCGGGTaGGCCTGCCTTTTTCACAAT | + |
|
Preference number: 4 (lower is better) Translates to: SPYHLSHILPSNSAAQLPGGDLG*ACLFHN Trigger: ATTGTGAAAAAGGCAGGCTCACCCGAGATCCCCGCC...AGGCAGCTGCGCAGCCGAATTGGAGGGCAGAATATGGCTTAAGTGGTAGGGGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000539408.5 |
||
| CDS-3UTR TCA 90 bp | TCCAATTCGGCTGCGCAGCCTGCATTAGAGAAACACCAGGCAAGTGGGCGGGGGCATTGGCTCTGGCACTaGAGGGCGTTCAGGATTAAG | + |
|
Preference number: 4 (lower is better) Translates to: SNSAAQPALEKHQASGRGHWLWH*RAFRIK Trigger: CTTAATCCTGAACGCCCTTCAGTGCCAGAGCCAATG...CCCCCGCCCACTTGCCTGGTGTTTCTCTAATGCAGGCTGCGCAGCCGAATTGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000541960.5 |
||
| CDS-3UTR GCA 90 bp | CCCTCCAATTCGGCTGCGCAGCCTGCATTAGAGAAACACCAGGCAAGTGGGCGGACAAGAGGTTTCTACTaGTGGGCTAAGGCCCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: PSNSAAQPALEKHQASGRTRGFY*WAKALV Trigger: CACCAGGGCCTTAGCCCAGCAGTAGAAACCTCTTGT...CCGCCCACTTGCCTGGTGTTTCTCTAATGCAGGCTGCGCAGCCGAATTGGAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000541960.5 |
||
| CDS-3UTR CCA 90 bp | CCCCTACCACTTAAGCCATATTCTGCCCTCCAATTCGGCTGCGCAGCCTGCATTTCTGTCTCCTTGCGGTaGGAGCCACCCTCTTTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: PLPLKPYSALQFGCAACISVSLR*EPPSFP Trigger: GGGGAAAGAGGGTGGCTCCCACCGCAAGGAGACAGA...AATGCAGGCTGCGCAGCCGAATTGGAGGGCAGAATATGGCTTAAGTGGTAGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000540424.5 ENST00000541960.5 ENST00000542722.5 |
||
| CDS-3UTR CCA 90 bp | CAACAGCTGCTGGTCCCCCTACCACTTAAGCCATATTCTGCCCTCCAATTCGGCTCAACACGAGGAGGCTaGCTGTCCCCACACAAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: QQLLVPLPLKPYSALQFGSTRGG*LSPHKP Trigger: GGGCTTGTGTGGGGACAGCCAGCCTCCTCGTGTTGA...GCCGAATTGGAGGGCAGAATATGGCTTAAGTGGTAGGGGGACCAGCAGCTGTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000537201.5 ENST00000540424.5 ENST00000541960.5 ENST00000542722.5 |
||
| CDS-3UTR CCA 90 bp | CCCCTACCACTTAAGCCATATTCTGCCCTCCAATTCGGCTGCGCAGCCTGCATTTCAACACGAGGAGGCTaGCTGTCCCCACACAAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: PLPLKPYSALQFGCAACISTRGG*LSPHKP Trigger: GGGCTTGTGTGGGGACAGCCAGCCTCCTCGTGTTGA...AATGCAGGCTGCGCAGCCGAATTGGAGGGCAGAATATGGCTTAAGTGGTAGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000540424.5 ENST00000541960.5 ENST00000542722.5 |
||
| CDS-3UTR CCA 90 bp | CCCTCCAATTCGGCTGCGCAGCCTGCATTAGAGAAACACCAGGCAAGTGGGCGGCCTTTTCCTGCTGGTTaGGATCCAGCCTCAGGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: PSNSAAQPALEKHQASGRPFPAG*DPASGE Trigger: TTCTCCTGAGGCTGGATCCCAACCAGCAGGAAAAGG...CCGCCCACTTGCCTGGTGTTTCTCTAATGCAGGCTGCGCAGCCGAATTGGAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000542722.5 |
||
| CDS-3UTR CCA 90 bp | CTACCACTTAAGCCATATTCTGCCCTCCAATTCGGCTGCGCAGCTGCCTGCGGTCCAGCCTTTTCCTGCTaGTTGGGATCCAGCCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LPLKPYSALQFGCAAACGPAFSC*LGSSLR Trigger: CCTGAGGCTGGATCCCAACCAGCAGGAAAAGGCTGG...ACCGCAGGCAGCTGCGCAGCCGAATTGGAGGGCAGAATATGGCTTAAGTGGTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000539408.5 |
||
| CDS-3UTR CCA 90 bp | CTGCTGGTCCCCCTACCACTTAAGCCATATTCTGCCCTCCAATTCGGCTGCGCACCAGCCTTTTCCTGCTaGTTGGGATCCAGCCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LLVPLPLKPYSALQFGCAPAFSC*LGSSLR Trigger: CCTGAGGCTGGATCCCAACCAGCAGGAAAAGGCTGG...TGCGCAGCCGAATTGGAGGGCAGAATATGGCTTAAGTGGTAGGGGGACCAGCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000542722.5 |
||
| CDS-3UTR CCA 90 bp | GAGGTTTCTACTGCTGGGCTAAGGCCCTGGTGGCTTCTGGTAGCTATAAAACCATTCTCCAGAGCCGCCTaGGCGCCCCAGGGAAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: EVSTAGLRPWWLLVAIKPFSRAA*APQGSH Trigger: ATGGCTTCCCTGGGGCGCCCAGGCGGCTCTGGAGAA...TGGTTTTATAGCTACCAGAAGCCACCAGGGCCTTAGCCCAGCAGTAGAAACCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000541960.5 |
||
| CDS-3UTR TCA 90 bp | CCCTCCAATTCGGCTGCGCAGCCTGCATTAGAGAAACACCAGGCAAGTGGGCGGATTCCAAGGAAGGGGTaGGATAAGGGGCACCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: PSNSAAQPALEKHQASGRIPRKG*DKGHQR Trigger: TCTTTGGTGCCCCTTATCTCACCCCTTCCTTGGAAT...CCGCCCACTTGCCTGGTGTTTCTCTAATGCAGGCTGCGCAGCCGAATTGGAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000540424.5 ENST00000541960.5 |
||
| CDS-3UTR TCA 90 bp | AGCCAAGGCAGAAATCGACTGGGTTTGCGCAAACCTCACCGCACAGCACAATGTCGGAGCCTAGAACGATaGGGCAAGAGGGCTGTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SQGRNRLGLRKPHRTAQCRSLER*GKRAVG Trigger: CCCAACAGCCCTCTTGCCTCATCGTTCTAGGCTCCG...ACATTGTGCTGTGCGGTGAGGTTTGCGCAAACCCAGTCGATTTCTGCCTTGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000541960.5 |
||
| CDS-3UTR GCA 90 bp | TCCCCCTACCACTTAAGCCATATTCTGCCCTCCAATTCGGCTGCGCAGCTGCCTGATCCCTTTGGCCAATaGAGAGCTGTCCCGTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SPYHLSHILPSNSAAQLPDPFGQ*RAVPCL Trigger: CAAGCACGGGACAGCTCTGCATTGGCCAAAGGGATC...AGGCAGCTGCGCAGCCGAATTGGAGGGCAGAATATGGCTTAAGTGGTAGGGGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000539408.5 |
||
| CDS-3UTR CCA 90 bp | TCCAACAGCTGCTGGTCCCCCTACCACTTAAGCCATATTCTGCCCTCCAATTCGTCAACACGAGGAGGCTaGCTGTCCCCACACAAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SNSCWSPYHLSHILPSNSSTRGG*LSPHKP Trigger: GGGCTTGTGTGGGGACAGCCAGCCTCCTCGTGTTGA...CGAATTGGAGGGCAGAATATGGCTTAAGTGGTAGGGGGACCAGCAGCTGTTGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000537201.5 ENST00000540424.5 ENST00000541960.5 ENST00000542722.5 |
||
| CDS-3UTR CCA 90 bp | TTAAGCCATATTCTGCCCTCCAATTCGGCTGCGCAGCTGCCTGCGGTAGTTTTAGAGGGCCAGGCCTCCTaGGATCCCTTTGGCCAATGC | + |
|
Preference number: 4 (lower is better) Translates to: LSHILPSNSAAQLPAVVLEGQAS*DPFGQC Trigger: GCATTGGCCAAAGGGATCCCAGGAGGCCTGGCCCTC...TAAAACTACCGCAGGCAGCTGCGCAGCCGAATTGGAGGGCAGAATATGGCTTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000539408.5 |
||
| CDS-3UTR CCA 90 bp | CTGCTGGTCCCCCTACCACTTAAGCCATATTCTGCCCTCCAATTCGGCTGCGCAAGGCAAGAGGGCTGTTaGGCAGAGAACGTGACCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LLVPLPLKPYSALQFGCARQEGC*AENVTL Trigger: CAAGGTCACGTTCTCTGCCCAACAGCCCTCTTGCCT...TGCGCAGCCGAATTGGAGGGCAGAATATGGCTTAAGTGGTAGGGGGACCAGCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000541960.5 |
||
| CDS-3UTR CCA 90 bp | CCCTCCAATTCGGCTGCGCAGCCTGCATTAGAGAAACACCAGGCAAGTGGGCGGAAAAGCTCTACAGTCTaGACGTCCATTGGCTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: PSNSAAQPALEKHQASGRKSSTV*TSIGSG Trigger: GCCAGAGCCAATGGACGTCCAGACTGTAGAGCTTTT...CCGCCCACTTGCCTGGTGTTTCTCTAATGCAGGCTGCGCAGCCGAATTGGAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000541960.5 |
||
| CDS-3UTR CCA 90 bp | TCCCCCTACCACTTAAGCCATATTCTGCCCTCCAATTCGGCTGCGCAGCCTGCAGCTGGGCTAAGGCCCTaGTGGCTTCTGGTAGCTATA | + |
|
Preference number: 4 (lower is better) Translates to: SPYHLSHILPSNSAAQPAAGLRP*WLLVAI Trigger: TATAGCTACCAGAAGCCACCAGGGCCTTAGCCCAGC...TGCAGGCTGCGCAGCCGAATTGGAGGGCAGAATATGGCTTAAGTGGTAGGGGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000541960.5 |
||
| CDS-3UTR TCA 90 bp | CAGCTGCTGGTCCCCCTACCACTTAAGCCATATTCTGCCCTCCAATTCGGCTGCCGACCAGGTACCAGGTaGTCAGAAATCAACACGAGG | + |
|
Preference number: 4 (lower is better) Translates to: QLLVPLPLKPYSALQFGCRPGTR*SEINTR Trigger: CCTCGTGTTGATTTCTGATCACCTGGTACCTGGTCG...GCAGCCGAATTGGAGGGCAGAATATGGCTTAAGTGGTAGGGGGACCAGCAGCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000537201.5 ENST00000540424.5 ENST00000541960.5 ENST00000542722.5 |
||
| CDS-3UTR GCA 90 bp | CCCCTACCACTTAAGCCATATTCTGCCCTCCAATTCGGCTGCGCAGCCTGCATTTGTGCTCAGAATAGCTaGAGAAACGTCCGCTCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: PLPLKPYSALQFGCAACICAQNS*RNVRSG Trigger: CCCGGAGCGGACGTTTCTGCAGCTATTCTGAGCACA...AATGCAGGCTGCGCAGCCGAATTGGAGGGCAGAATATGGCTTAAGTGGTAGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000540424.5 ENST00000542722.5 |
||
| CDS-3UTR GCA 90 bp | GCTAGAGGATGCCAGACTGCACTGGACGGCATCCAGTATTGTGCAACCAGAACCTGTGCTCAGAATAGCTaGAGAAACGTCCGCTCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: ARGCQTALDGIQYCATRTCAQNS*RNVRSG Trigger: CCCGGAGCGGACGTTTCTGCAGCTATTCTGAGCACA...GGTTCTGGTTGCACAATACTGGATGCCGTCCAGTGCAGTCTGGCATCCTCTAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000545047.5 |
||
| CDS-3UTR GCA 90 bp | GGAGCCTTCTCTACAATCACCCGAGAGCTCCACAGTCCTTCAGACAGGGTTGGAGCCCTCCAATTCGGCTaGGCAGCCTGCATTAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: GAFSTITRELHSPSDRVGALQFG*AACIRE Trigger: TTCTCTAATGCAGGCTGCGCAGCCGAATTGGAGGGC...TCCAACCCTGTCTGAAGGACTGTGGAGCTCTCGGGTGATTGTAGAGAAGGCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000540424.5 ENST00000541960.5 |
||
| CDS-3UTR GCA 90 bp | TCCCCCTACCACTTAAGCCATATTCTGCCCTCCAATTCGGCTGCGCAGCCTGCAAATCCAGCCTTTTCCTaGTGGTTGGGATCCAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SPYHLSHILPSNSAAQPANPAFS*WLGSSL Trigger: GAGGCTGGATCCCAACCAGCAGGAAAAGGCTGGATT...TGCAGGCTGCGCAGCCGAATTGGAGGGCAGAATATGGCTTAAGTGGTAGGGGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000542722.5 |
||
| 3UTR CAA 72 bp | ATGAGGCAAGAGGGCTGTTGGGCAGAGAACGTGACCTaGTTTTCCAGGCCAGGACTGTCTTGTGCTCCCCTA | + |
|
Preference number: 4 (lower is better) Translates to: MRQEGCWAENVT*FSRPGLSCAPL Trigger: TAGGGGAGCACAAGACAGTCCTGGCCTGGAAAACAAGGTCACGTTCTCTGCCCAACAGCCCTCTTGCCTCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000541960.5 |
||
| CDS-3UTR TCA 90 bp | CAACAGCTGCTGGTCCCCCTACCACTTAAGCCATATTCTGCCCTCCAATTCGGCACTGTGATGTCTGAGTaGGATTGCAACCGGGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: QQLLVPLPLKPYSALQFGTVMSE*DCNRDG Trigger: CCCATCCCGGTTGCAATCTCACTCAGACATCACAGT...GCCGAATTGGAGGGCAGAATATGGCTTAAGTGGTAGGGGGACCAGCAGCTGTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000540424.5 ENST00000541960.5 |
||
| CDS-3UTR TCA 90 bp | GAGGCAAGAGGGCTGTTGGGCAGAGAACGTGACCTTGTTTTCCAGGCCAGGACTATTCCAAGGAAGGGGTaGGATAAGGGGCACCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: EARGLLGRERDLVFQARTIPRKG*DKGHQR Trigger: TCTTTGGTGCCCCTTATCTCACCCCTTCCTTGGAAT...AGTCCTGGCCTGGAAAACAAGGTCACGTTCTCTGCCCAACAGCCCTCTTGCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000541960.5 |
||
| CDS-3UTR GCA 90 bp | CAGCTGCTGGTCCCCCTACCACTTAAGCCATATTCTGCCCTCCAATTCGGCTGCGGCTGCGCAGCTGCCTaGGGTAGTTTTAACTACTTA | + |
|
Preference number: 4 (lower is better) Translates to: QLLVPLPLKPYSALQFGCGCAAA*GSFNYL Trigger: TAAGTAGTTAAAACTACCGCAGGCAGCTGCGCAGCC...GCAGCCGAATTGGAGGGCAGAATATGGCTTAAGTGGTAGGGGGACCAGCAGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000537201.5 |
||
| CDS-3UTR GCA 90 bp | TCCAACAGCTGCTGGTCCCCCTACCACTTAAGCCATATTCTGCCCTCCAATTCGTTCGGCTGCGCAGCCTaGATTAGAGAAACACCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SNSCWSPYHLSHILPSNSFGCAA*IRETPG Trigger: GCCTGGTGTTTCTCTAATGCAGGCTGCGCAGCCGAA...CGAATTGGAGGGCAGAATATGGCTTAAGTGGTAGGGGGACCAGCAGCTGTTGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000540424.5 ENST00000541960.5 ENST00000542722.5 |
||
| CDS-3UTR CCA 90 bp | GAGGCAAGAGGGCTGTTGGGCAGAGAACGTGACCTTGTTTTCCAGGCCAGGACTAAGGCAGAAATCGACTaGGTTTGCGCAAACCTCACC | + |
|
Preference number: 4 (lower is better) Translates to: EARGLLGRERDLVFQARTKAEID*VCANLT Trigger: GGTGAGGTTTGCGCAAACCCAGTCGATTTCTGCCTT...AGTCCTGGCCTGGAAAACAAGGTCACGTTCTCTGCCCAACAGCCCTCTTGCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000541960.5 |
||
| CDS-3UTR CCA 90 bp | AAAGGAAAAGGGTTACAAGAGGTTTCTACTGCTGGGCTAAGGCCCTGGTGGCTTGAAACACCAGGCAAGTaGGCGGGGGAGGGGGTAATG | + |
|
Preference number: 4 (lower is better) Translates to: KGKGLQEVSTAGLRPWWLETPGK*AGEGVM Trigger: CATTACCCCCTCCCCCGCCCACTTGCCTGGTGTTTC...AAGCCACCAGGGCCTTAGCCCAGCAGTAGAAACCTCTTGTAACCCTTTTCCTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000541960.5 |
||
| CDS-3UTR CCA 90 bp | GAGGCAAGAGGGCTGTTGGGCAGAGAACGTGACCTTGTTTTCCAGGCCAGGACTGGGCTAAGGCCCTGGTaGCTTCTGGTAGCTATAAAA | + |
|
Preference number: 4 (lower is better) Translates to: EARGLLGRERDLVFQARTGLRPW*LLVAIK Trigger: TTTTATAGCTACCAGAAGCCACCAGGGCCTTAGCCC...AGTCCTGGCCTGGAAAACAAGGTCACGTTCTCTGCCCAACAGCCCTCTTGCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000541960.5 |
||
| CDS-3UTR TCA 90 bp | CTTAAGCCATATTCTGCCCTCCAATTCGGCTGCGCAGCTGCCTGCGGTAGTTTTCGACCAGGTACCAGGTaGTCAGAAATCAACACGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LKPYSALQFGCAAACGSFRPGTR*SEINTR Trigger: CCTCGTGTTGATTTCTGATCACCTGGTACCTGGTCG...AAAACTACCGCAGGCAGCTGCGCAGCCGAATTGGAGGGCAGAATATGGCTTAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000537201.5 ENST00000539408.5 |
||
| CDS-3UTR GCA 90 bp | CATATTCTGCCCTCCAATTCGGCTGCGCAGCTGCCTGCGGTAGTTTTAACTACTTGTGCTCAGAATAGCTaGAGAAACGTCCGCTCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: HILPSNSAAQLPAVVLTTCAQNS*RNVRSG Trigger: CCCGGAGCGGACGTTTCTGCAGCTATTCTGAGCACA...AGTAGTTAAAACTACCGCAGGCAGCTGCGCAGCCGAATTGGAGGGCAGAATATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000537201.5 ENST00000539408.5 |
||
| CDS-3UTR GCA 90 bp | TTAAGCCATATTCTGCCCTCCAATTCGGCTGCGCAGCTGCCTGCGGTAGTTTTATGTGCTCAGAATAGCTaGAGAAACGTCCGCTCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: LSHILPSNSAAQLPAVVLCAQNS*RNVRSG Trigger: CCCGGAGCGGACGTTTCTGCAGCTATTCTGAGCACA...TAAAACTACCGCAGGCAGCTGCGCAGCCGAATTGGAGGGCAGAATATGGCTTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000537201.5 ENST00000539408.5 |
||
| CDS-3UTR GCA 90 bp | GGACGGCATCCAGTATTGTGCAACCAGAACCATTACCTCATACAGTTGGCCCATACAAGGGCTAGAGGATaGCAGACTGCACTGGACGGC | + |
|
Preference number: 4 (lower is better) Translates to: GRHPVLCNQNHYLIQLAHTRARG*QTALDG Trigger: GCCGTCCAGTGCAGTCTGGCATCCTCTAGCCCTTGT...ATGGGCCAACTGTATGAGGTAATGGTTCTGGTTGCACAATACTGGATGCCGTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000545047.5 |
||
| CDS-3UTR GCA 90 bp | CAACAGCTGCTGGTCCCCCTACCACTTAAGCCATATTCTGCCCTCCAATTCGGCAAAACGTCTCAGTCCTaGCTTATCGCGACCAGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: QQLLVPLPLKPYSALQFGKTSQS*LIATRY Trigger: GTACCTGGTCGCGATAAGGCAGGACTGAGACGTTTT...GCCGAATTGGAGGGCAGAATATGGCTTAAGTGGTAGGGGGACCAGCAGCTGTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000537201.5 ENST00000540424.5 ENST00000541960.5 ENST00000542722.5 |
||
| CDS-3UTR GCA 90 bp | CACTTAAGCCATATTCTGCCCTCCAATTCGGCTGCGCAGCTGCCTGCGGTAGTTAAAACGTCTCAGTCCTaGCTTATCGCGACCAGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: HLSHILPSNSAAQLPAVVKTSQS*LIATRY Trigger: GTACCTGGTCGCGATAAGGCAGGACTGAGACGTTTT...AACTACCGCAGGCAGCTGCGCAGCCGAATTGGAGGGCAGAATATGGCTTAAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000537201.5 ENST00000539408.5 |
||
| CDS-3UTR GCA 90 bp | CACTTAAGCCATATTCTGCCCTCCAATTCGGCTGCGCAGCTGCCTGCGGTAGTTCCAAAATCCAACAGCTaGTGGTCCCCCTACCACTTA | + |
|
Preference number: 4 (lower is better) Translates to: HLSHILPSNSAAQLPAVVPKSNS*WSPYHL Trigger: TAAGTGGTAGGGGGACCAGCAGCTGTTGGATTTTGG...AACTACCGCAGGCAGCTGCGCAGCCGAATTGGAGGGCAGAATATGGCTTAAGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000537201.5 |
||
| CDS-3UTR GCA 90 bp | CAACAGCTGCTGGTCCCCCTACCACTTAAGCCATATTCTGCCCTCCAATTCGGCCCAAAATCCAACAGCTaGTGGTCCCCCTACCACTTA | + |
|
Preference number: 4 (lower is better) Translates to: QQLLVPLPLKPYSALQFGPKSNS*WSPYHL Trigger: TAAGTGGTAGGGGGACCAGCAGCTGTTGGATTTTGG...GCCGAATTGGAGGGCAGAATATGGCTTAAGTGGTAGGGGGACCAGCAGCTGTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENST00000537201.5 ENST00000540424.5 ENST00000541960.5 ENST00000542722.5 |
||
| CDS-3UTR GCA 90 bp | CCACAGTCCTTCAGACAGGGTTGGAATTCCAGCTCAACCACAGATCAGCAATGTAGGGGCCCTATTTTGTaGACCGCAACCCACACACGG | + |
|
Preference number: 4 (lower is better) Translates to: PQSFRQGWNSSSTTDQQCRGPIL*TATHTR Trigger: CCGTGTGTGGGTTGCGGTGCACAAAATAGGGCCCCT...ACATTGCTGATCTGTGGTTGAGCTGGAATTCCAACCCTGTCTGAAGGACTGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000541960.5 |
||
| CDS-3UTR GCA 90 bp | CAGCTGCTGGTCCCCCTACCACTTAAGCCATATTCTGCCCTCCAATTCGGCTGCACAGCACAATGTCCCTaGGTTCTTAAAGGCAGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: QLLVPLPLKPYSALQFGCTAQCP*VLKGSQ Trigger: TTGGCTGCCTTTAAGAACGCAGGGACATTGTGCTGT...GCAGCCGAATTGGAGGGCAGAATATGGCTTAAGTGGTAGGGGGACCAGCAGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000541960.5 |
||
| CDS-3UTR GCA 90 bp | AGCCAAGGCAGAAATCGACTGGGTTTGCGCAAACCTCACCGCACAGCACAATGTGAAATCGACTGGGTTTaGGCAAACCTCACCGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: SQGRNRLGLRKPHRTAQCEIDWV*ANLTAQ Trigger: CTGTGCGGTGAGGTTTGCGCAAACCCAGTCGATTTC...ACATTGTGCTGTGCGGTGAGGTTTGCGCAAACCCAGTCGATTTCTGCCTTGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000541960.5 |
||
| CDS-3UTR CCA 90 bp | GCAGCTGCCTGCGGTAGTTTTAACTACTTAAGCCGGTGTCCAAAACGGAGAAAATCAACACGAGGAGGCTaGCTGTCCCCACACAAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: AAACGSFNYLSRCPKRRKSTRGG*LSPHKP Trigger: GGGCTTGTGTGGGGACAGCCAGCCTCCTCGTGTTGA...TTTTCTCCGTTTTGGACACCGGCTTAAGTAGTTAAAACTACCGCAGGCAGCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000537201.5 ENST00000539408.5 |
||
| CDS-3UTR CCA 90 bp | TCCAACAGCTGCTGGTCCCCCTACCACTTAAGCCATATTCTGCCCTCCAATTCGAAGGCAGCCAATCCATaGCCCCGATCTAACCAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SNSCWSPYHLSHILPSNSKAANP*PRSNQS Trigger: AGACTGGTTAGATCGGGGCCATGGATTGGCTGCCTT...CGAATTGGAGGGCAGAATATGGCTTAAGTGGTAGGGGGACCAGCAGCTGTTGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000541960.5 |
||
| CDS-3UTR TCA 90 bp | TCCAATTCGGCTGCGCAGCCTGCATTAGAGAAACACCAGGCAAGTGGGCGGGGGTATCAATTGAGCATGTaGAAATGTGATGACGGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SNSAAQPALEKHQASGRGYQLSM*KCDDGV Trigger: CACACCGTCATCACATTTTCACATGCTCAATTGATA...CCCCCGCCCACTTGCCTGGTGTTTCTCTAATGCAGGCTGCGCAGCCGAATTGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000540424.5 ENST00000541960.5 ENST00000542722.5 |
||
| CDS-3UTR TCA 90 bp | GAGGCAAGAGGGCTGTTGGGCAGAGAACGTGACCTTGTTTTCCAGGCCAGGACTTCGTCCCAAGACCAATaGTATGAGAGCCAAAGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: EARGLLGRERDLVFQARTSSQDQ*YESQSQ Trigger: TTGACTTTGGCTCTCATATCATTGGTCTTGGGACGA...AGTCCTGGCCTGGAAAACAAGGTCACGTTCTCTGCCCAACAGCCCTCTTGCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000541960.5 |
||
| CDS-3UTR TCA 90 bp | CCCTCCAATTCGGCTGCGCAGCCTGCATTAGAGAAACACCAGGCAAGTGGGCGGAAAACGCCCGGATGCTaGAAGATACCTAATACTTTT | + |
|
Preference number: 4 (lower is better) Translates to: PSNSAAQPALEKHQASGRKTPGC*KIPNTF Trigger: AAAAGTATTAGGTATCTTTCAGCATCCGGGCGTTTT...CCGCCCACTTGCCTGGTGTTTCTCTAATGCAGGCTGCGCAGCCGAATTGGAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000540424.5 ENST00000541960.5 ENST00000542722.5 |
||
| CDS-3UTR TCA 90 bp | TCCAATTCGGCTGCGCAGCCTGCATTAGAGAAACACCAGGCAAGTGGGCGGGGGAAAACGCCCGGATGCTaGAAGATACCTAATACTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SNSAAQPALEKHQASGRGKTPGC*KIPNTF Trigger: AAAAGTATTAGGTATCTTTCAGCATCCGGGCGTTTT...CCCCCGCCCACTTGCCTGGTGTTTCTCTAATGCAGGCTGCGCAGCCGAATTGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000540424.5 ENST00000541960.5 ENST00000542722.5 |
||
| CDS-3UTR TCA 90 bp | TCCAATTCGGCTGCGCAGCCTGCATTAGAGAAACACCAGGCAAGTGGGCGGGGGCACCCCTCTATAAGCTaGAAACCTTTTTGTAATTCC | + |
|
Preference number: 4 (lower is better) Translates to: SNSAAQPALEKHQASGRGHPSIS*KPFCNS Trigger: GGAATTACAAAAAGGTTTTCAGCTTATAGAGGGGTG...CCCCCGCCCACTTGCCTGGTGTTTCTCTAATGCAGGCTGCGCAGCCGAATTGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000541960.5 |
||
| CDS-3UTR GCA 90 bp | AGGGCTAGAGGATGCCAGACTGCACTGGACGGCATCCAGTATTGTGCAACCAGACGGCATCCAGTATTGTaGAACCAGAACCATTACCTC | + |
|
Preference number: 4 (lower is better) Translates to: RARGCQTALDGIQYCATRRHPVL*NQNHYL Trigger: GAGGTAATGGTTCTGGTTGCACAATACTGGATGCCG...TCTGGTTGCACAATACTGGATGCCGTCCAGTGCAGTCTGGCATCCTCTAGCCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000545047.5 |
||
| CDS-3UTR GCA 90 bp | TCCAACAGCTGCTGGTCCCCCTACCACTTAAGCCATATTCTGCCCTCCAATTCGAAAACGTCTCAGTCCTaGCTTATCGCGACCAGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: SNSCWSPYHLSHILPSNSKTSQS*LIATRY Trigger: GTACCTGGTCGCGATAAGGCAGGACTGAGACGTTTT...CGAATTGGAGGGCAGAATATGGCTTAAGTGGTAGGGGGACCAGCAGCTGTTGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000537201.5 ENST00000540424.5 ENST00000541960.5 ENST00000542722.5 |
||
| CDS-3UTR GCA 90 bp | CTCCAATTCGGCTGCGCAGCTGCCTGCGGTAGTTTTAACTACTTAAGCCGGTGTGGCTGCGCAGCTGCCTaGGGTAGTTTTAACTACTTA | + |
|
Preference number: 4 (lower is better) Translates to: LQFGCAAACGSFNYLSRCGCAAA*GSFNYL Trigger: TAAGTAGTTAAAACTACCGCAGGCAGCTGCGCAGCC...ACACCGGCTTAAGTAGTTAAAACTACCGCAGGCAGCTGCGCAGCCGAATTGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000537201.5 ENST00000539408.5 |
||
| CDS-3UTR GCA 90 bp | CCACAGTCCTTCAGACAGGGTTGGAATTCCAGCTCAACCACAGATCAGCAATGTTTCGGCTGCGCAGCCTaGATTAGAGAAACACCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: PQSFRQGWNSSSTTDQQCFGCAA*IRETPG Trigger: GCCTGGTGTTTCTCTAATGCAGGCTGCGCAGCCGAA...ACATTGCTGATCTGTGGTTGAGCTGGAATTCCAACCCTGTCTGAAGGACTGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000540424.5 ENST00000541960.5 |
||
| CDS-3UTR GCA 90 bp | TTCGGCTGCGCAGCTGCCTGCGGTAGTTTTAACTACTTAAGCCGGTGTCCAAAAAATCCAGCCTTTTCCTaGTGGTTGGGATCCAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: FGCAAACGSFNYLSRCPKNPAFS*WLGSSL Trigger: GAGGCTGGATCCCAACCAGCAGGAAAAGGCTGGATT...TTTTGGACACCGGCTTAAGTAGTTAAAACTACCGCAGGCAGCTGCGCAGCCGAA 52% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000539408.5 |
||
| CDS-3UTR CCA 90 bp | GAGGATGCCAGACTGCACTGGACGGCATCCAGTATTGTGCAACCAGAACCATTAGATGCCAGACTGCACTaGACGGCATCCAGTATTGTG | + |
|
Preference number: 4 (lower is better) Translates to: EDARLHWTASSIVQPEPLDARLH*TASSIV Trigger: CACAATACTGGATGCCGTCCAGTGCAGTCTGGCATC...TAATGGTTCTGGTTGCACAATACTGGATGCCGTCCAGTGCAGTCTGGCATCCTC 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000545047.5 |
||
| CDS-3UTR CCA 90 bp | TTAAGCCATATTCTGCCCTCCAATTCGGCTGCGCAGCTGCCTGCGGTAGTTTTACCTTTTCCTGCTGGTTaGGATCCAGCCTCAGGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LSHILPSNSAAQLPAVVLPFPAG*DPASGE Trigger: TTCTCCTGAGGCTGGATCCCAACCAGCAGGAAAAGG...TAAAACTACCGCAGGCAGCTGCGCAGCCGAATTGGAGGGCAGAATATGGCTTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000539408.5 |
||
| CDS-3UTR CCA 90 bp | TCCAATTCGGCTGCGCAGCCTGCATTAGAGAAACACCAGGCAAGTGGGCGGGGGCCTTTTTGTAATTCCTaGGGAATGAAGAGCCCTAAT | + |
|
Preference number: 4 (lower is better) Translates to: SNSAAQPALEKHQASGRGPFCNS*GMKSPN Trigger: ATTAGGGCTCTTCATTCCCCAGGAATTACAAAAAGG...CCCCCGCCCACTTGCCTGGTGTTTCTCTAATGCAGGCTGCGCAGCCGAATTGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000541960.5 |
||
| CDS-3UTR TCA 90 bp | TCCCCCTACCACTTAAGCCATATTCTGCCCTCCAATTCGGCTGCGCAGCCTGCATTACTGAATAGCTTCTaGACCTTTTCGTCCCAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: SPYHLSHILPSNSAAQPALLNSF*TFSSQD Trigger: GTCTTGGGACGAAAAGGTTCAGAAGCTATTCAGTAA...TGCAGGCTGCGCAGCCGAATTGGAGGGCAGAATATGGCTTAAGTGGTAGGGGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000541960.5 |
||
| CDS-3UTR TCA 90 bp | CTGCTGGTCCCCCTACCACTTAAGCCATATTCTGCCCTCCAATTCGGCTGCGCATATCAATTGAGCATGTaGAAATGTGATGACGGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LLVPLPLKPYSALQFGCAYQLSM*KCDDGV Trigger: CACACCGTCATCACATTTTCACATGCTCAATTGATA...TGCGCAGCCGAATTGGAGGGCAGAATATGGCTTAAGTGGTAGGGGGACCAGCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000540424.5 ENST00000541960.5 ENST00000542722.5 |
||
| CDS-3UTR TCA 90 bp | CTGCTGGTCCCCCTACCACTTAAGCCATATTCTGCCCTCCAATTCGGCTGCGCACTCCTGACCCATCTATaGAACTGCACAACAATTAAA | + |
|
Preference number: 4 (lower is better) Translates to: LLVPLPLKPYSALQFGCALLTHL*NCTTIK Trigger: TTTAATTGTTGTGCAGTTTCATAGATGGGTCAGGAG...TGCGCAGCCGAATTGGAGGGCAGAATATGGCTTAAGTGGTAGGGGGACCAGCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000540424.5 ENST00000541960.5 |
||
| CDS-3UTR TCA 90 bp | GCAGCTGCCTGCGGTAGTTTTAACTACTTAAGCCGGTGTCCAAAACGGAGAAAACGACCAGGTACCAGGTaGTCAGAAATCAACACGAGG | + |
|
Preference number: 4 (lower is better) Translates to: AAACGSFNYLSRCPKRRKRPGTR*SEINTR Trigger: CCTCGTGTTGATTTCTGATCACCTGGTACCTGGTCG...TTTTCTCCGTTTTGGACACCGGCTTAAGTAGTTAAAACTACCGCAGGCAGCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000537201.5 ENST00000539408.5 |
||
| CDS-3UTR GCA 90 bp | GAGGCAAGAGGGCTGTTGGGCAGAGAACGTGACCTTGTTTTCCAGGCCAGGACTTTCCTACTCACTGCCTaGGGTAGTTTTAACTACTTA | + |
|
Preference number: 4 (lower is better) Translates to: EARGLLGRERDLVFQARTFLLTA*GSFNYL Trigger: TAAGTAGTTAAAACTACCGCAGGCAGTGAGTAGGAA...AGTCCTGGCCTGGAAAACAAGGTCACGTTCTCTGCCCAACAGCCCTCTTGCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000541960.5 |
||
| CDS-3UTR GCA 90 bp | TCCCCCTACCACTTAAGCCATATTCTGCCCTCCAATTCGGCTGCGCAGCCTGCATTCCTACTCACTGCCTaGGGTAGTTTTAACTACTTA | + |
|
Preference number: 4 (lower is better) Translates to: SPYHLSHILPSNSAAQPAFLLTA*GSFNYL Trigger: TAAGTAGTTAAAACTACCGCAGGCAGTGAGTAGGAA...TGCAGGCTGCGCAGCCGAATTGGAGGGCAGAATATGGCTTAAGTGGTAGGGGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000540424.5 ENST00000541960.5 ENST00000542722.5 |
||
| CDS-3UTR GCA 90 bp | CAGGGTTGGAATTCCAGCTCAACCACAGATCAGCAATGTGAAACCTTTAGGAAGGCCCTCCAATTCGGCTaGGCAGCCTGCATTAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: QGWNSSSTTDQQCETFRKALQFG*AACIRE Trigger: TTCTCTAATGCAGGCTGCGCAGCCGAATTGGAGGGC...CTTCCTAAAGGTTTCACATTGCTGATCTGTGGTTGAGCTGGAATTCCAACCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000540424.5 ENST00000541960.5 |
||
| CDS-3UTR TCA 90 bp | TCAGACAAGACTATAGTCAGACAAGATTTCAGAAGGATTAAATCTAGTAGAGTGTGCCTCCTTCGCCGCTaGCCCTGTCCCGCTCCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SDKTIVRQDFRRIKSSRVCLLRR*PCPAPS Trigger: TGAGGGAGCGGGACAGGGTCAGCGGCGAAGGAGGCA...CACTCTACTAGATTTAATCCTTCTGAAATCTTGTCTGACTATAGTCTTGTCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000421801.6 |
||
| CDS-3UTR TCA 90 bp | CCCCTACCACTTAAGCCATATTCTGCCCTCCAATTCGGCTGCGCAGCCTGCATTCTCCTGACCCATCTATaGAACTGCACAACAATTAAA | + |
|
Preference number: 4 (lower is better) Translates to: PLPLKPYSALQFGCAACILLTHL*NCTTIK Trigger: TTTAATTGTTGTGCAGTTTCATAGATGGGTCAGGAG...AATGCAGGCTGCGCAGCCGAATTGGAGGGCAGAATATGGCTTAAGTGGTAGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000540424.5 ENST00000541960.5 |
||
| CDS-3UTR TCA 90 bp | CAGGGTTGGAATTCCAGCTCAACCACAGATCAGCAATGTGAAACCTTTAGGAAGACTGTGATGTCTGAGTaGGATTGCAACCGGGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: QGWNSSSTTDQQCETFRKTVMSE*DCNRDG Trigger: CCCATCCCGGTTGCAATCTCACTCAGACATCACAGT...CTTCCTAAAGGTTTCACATTGCTGATCTGTGGTTGAGCTGGAATTCCAACCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000540424.5 ENST00000541960.5 |
||
| CDS-3UTR TCA 90 bp | CCACAGATCAGCAATGTGAAACCTTTAGGAAGTTACTGCATTTCTTTGTGCTTTCCGTGTGTGGGTTGCTaGGTCACTGAAGACGGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: PQISNVKPLGSYCISLCFPCVGC*VTEDGG Trigger: GCCGCCGTCTTCAGTGACTCAGCAACCCACACACGG...AAAGCACAAAGAAATGCAGTAACTTCCTAAAGGTTTCACATTGCTGATCTGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000541960.5 |
||
| CDS-3UTR TCA 90 bp | AGCCAAGGCAGAAATCGACTGGGTTTGCGCAAACCTCACCGCACAGCACAATGTCCAAGACCAATGATATaGGAGCCAAAGTCAACTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SQGRNRLGLRKPHRTAQCPRPMI*EPKSTS Trigger: TGAAGTTGACTTTGGCTCTCATATCATTGGTCTTGG...ACATTGTGCTGTGCGGTGAGGTTTGCGCAAACCCAGTCGATTTCTGCCTTGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000541960.5 |
||
| CDS-3UTR CCA 90 bp | CCCCTACCACTTAAGCCATATTCTGCCCTCCAATTCGGCTGCGCAGCCTGCATTTGGTATCACCAGAACTaGGCAAAATTTTCAGGTATC | + |
|
Preference number: 4 (lower is better) Translates to: PLPLKPYSALQFGCAACIWYHQN*AKFSGI Trigger: GATACCTGAAAATTTTGCCCAGTTCTGGTGATACCA...AATGCAGGCTGCGCAGCCGAATTGGAGGGCAGAATATGGCTTAAGTGGTAGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000541960.5 |
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| CDS-3UTR TCA 90 bp | ATCAGCAATGTGAAACCTTTAGGAAGTTACTGCATTTCTTTGTGCTTTGAATACAAACGCCGTCAGCCCTaGAGTGGGGTTCGGGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: ISNVKPLGSYCISLCFEYKRRQP*SGVRGP Trigger: TGGGCCCCGAACCCCACTTCAGGGCTGACGGCGTTT...GTATTCAAAGCACAAAGAAATGCAGTAACTTCCTAAAGGTTTCACATTGCTGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000541960.5 |
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| CDS-3UTR TCA 90 bp | GAGGTTTCTACTGCTGGGCTAAGGCCCTGGTGGCTTCTGGTAGCTATAAAACCAGTAATTCCTGGGGAATaGAGAGCCCTAATGACTTTT | + |
|
Preference number: 4 (lower is better) Translates to: EVSTAGLRPWWLLVAIKPVIPGE*RALMTF Trigger: AAAAGTCATTAGGGCTCTTCATTCCCCAGGAATTAC...TGGTTTTATAGCTACCAGAAGCCACCAGGGCCTTAGCCCAGCAGTAGAAACCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000541960.5 |
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| CDS-3UTR GCA 90 bp | CAGCTGCTGGTCCCCCTACCACTTAAGCCATATTCTGCCCTCCAATTCGGCTGCTACTGCATTTCTTTGTaGTTTGAATACTCCATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: QLLVPLPLKPYSALQFGCYCISL*FEYSIC Trigger: ACAGATGGAGTATTCAAAGCACAAAGAAATGCAGTA...GCAGCCGAATTGGAGGGCAGAATATGGCTTAAGTGGTAGGGGGACCAGCAGCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000541960.5 |
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| CDS-3UTR TCA 90 bp | GAGGTTTCTACTGCTGGGCTAAGGCCCTGGTGGCTTCTGGTAGCTATAAAACCAAAAACGCCCGGATGCTaGAAGATACCTAATACTTTT | + |
|
Preference number: 4 (lower is better) Translates to: EVSTAGLRPWWLLVAIKPKTPGC*KIPNTF Trigger: AAAAGTATTAGGTATCTTTCAGCATCCGGGCGTTTT...TGGTTTTATAGCTACCAGAAGCCACCAGGGCCTTAGCCCAGCAGTAGAAACCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000541960.5 |
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| CDS-3UTR CCA 90 bp | CAACAGCTGCTGGTCCCCCTACCACTTAAGCCATATTCTGCCCTCCAATTCGGCATTATTTTATTTCCTTaGCCTGATGGCATTGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: QQLLVPLPLKPYSALQFGIILFP*PDGIDF Trigger: GAAGTCAATGCCATCAGGCCAAGGAAATAAAATAAT...GCCGAATTGGAGGGCAGAATATGGCTTAAGTGGTAGGGGGACCAGCAGCTGTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000540424.5 ENST00000541960.5 |
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| CDS-3UTR TCA 90 bp | CCACAGTCCTTCAGACAGGGTTGGAATTCCAGCTCAACCACAGATCAGCAATGTTATCAATTGAGCATGTaGAAATGTGATGACGGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: PQSFRQGWNSSSTTDQQCYQLSM*KCDDGV Trigger: CACACCGTCATCACATTTTCACATGCTCAATTGATA...ACATTGCTGATCTGTGGTTGAGCTGGAATTCCAACCCTGTCTGAAGGACTGTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000540424.5 ENST00000541960.5 |
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| CDS-3UTR CCA 90 bp | AACCTCACCGCACAGCACAATGTCCCTGCGTTCTTAAAGGCAGCCAATCCATGGATTATTTTATTTCCTTaGCCTGATGGCATTGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: NLTAQHNVPAFLKAANPWIILFP*PDGIDF Trigger: GAAGTCAATGCCATCAGGCCAAGGAAATAAAATAAT...CCATGGATTGGCTGCCTTTAAGAACGCAGGGACATTGTGCTGTGCGGTGAGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000541960.5 |
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| CDS-3UTR CCA 90 bp | TCAGACAAGACTATAGTCAGACAAGATTTCAGAAGGATTAAATCTAGTAGAGTGGAGCACAAAAACAGCTaGGTGGCGCGTCGGGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SDKTIVRQDFRRIKSSRVEHKNS*VARRAV Trigger: CACAGCCCGACGCGCCACCCAGCTGTTTTTGTGCTC...CACTCTACTAGATTTAATCCTTCTGAAATCTTGTCTGACTATAGTCTTGTCTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000421801.6 |
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| CDS-3UTR GCA 90 bp | TCAGACAAGACTATAGTCAGACAAGATTTCAGAAGGATTAAATCTAGTAGAGTGACAAGGGCTAGAGGATaGCAGACTGCACTGGACGGC | + |
|
Preference number: 4 (lower is better) Translates to: SDKTIVRQDFRRIKSSRVTRARG*QTALDG Trigger: GCCGTCCAGTGCAGTCTGGCATCCTCTAGCCCTTGT...CACTCTACTAGATTTAATCCTTCTGAAATCTTGTCTGACTATAGTCTTGTCTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000421801.6 |
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| CDS-3UTR GCA 90 bp | TCAGACAAGACTATAGTCAGACAAGATTTCAGAAGGATTAAATCTAGTAGAGTGTGTGCTCAGAATAGCTaGAGAAACGTCCGCTCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: SDKTIVRQDFRRIKSSRVCAQNS*RNVRSG Trigger: CCCGGAGCGGACGTTTCTGCAGCTATTCTGAGCACA...CACTCTACTAGATTTAATCCTTCTGAAATCTTGTCTGACTATAGTCTTGTCTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000421801.6 |
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| CDS-3UTR GCA 90 bp | CCACAGATCAGCAATGTGAAACCTTTAGGAAGTTACTGCATTTCTTTGTGCTTTCCAAAATCCAACAGCTaGTGGTCCCCCTACCACTTA | + |
|
Preference number: 4 (lower is better) Translates to: PQISNVKPLGSYCISLCFPKSNS*WSPYHL Trigger: TAAGTGGTAGGGGGACCAGCAGCTGTTGGATTTTGG...AAAGCACAAAGAAATGCAGTAACTTCCTAAAGGTTTCACATTGCTGATCTGTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000540424.5 ENST00000541960.5 |
||
| CDS-3UTR GCA 90 bp | CAGGGTTGGAATTCCAGCTCAACCACAGATCAGCAATGTGAAACCTTTAGGAAGTTCCTACTCACTGCCTaGGGTAGTTTTAACTACTTA | + |
|
Preference number: 4 (lower is better) Translates to: QGWNSSSTTDQQCETFRKFLLTA*GSFNYL Trigger: TAAGTAGTTAAAACTACCGCAGGCAGTGAGTAGGAA...CTTCCTAAAGGTTTCACATTGCTGATCTGTGGTTGAGCTGGAATTCCAACCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000540424.5 ENST00000541960.5 |
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| CDS-3UTR TCA 90 bp | ATCAGCAATGTGAAACCTTTAGGAAGTTACTGCATTTCTTTGTGCTTTGAATACCGACCAGGTACCAGGTaGTCAGAAATCAACACGAGG | + |
|
Preference number: 4 (lower is better) Translates to: ISNVKPLGSYCISLCFEYRPGTR*SEINTR Trigger: CCTCGTGTTGATTTCTGATCACCTGGTACCTGGTCG...GTATTCAAAGCACAAAGAAATGCAGTAACTTCCTAAAGGTTTCACATTGCTGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000540424.5 ENST00000541960.5 |
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| CDS-3UTR CCA 90 bp | TCAGACAAGACTATAGTCAGACAAGATTTCAGAAGGATTAAATCTAGTAGAGTGGATGCCAGACTGCACTaGACGGCATCCAGTATTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SDKTIVRQDFRRIKSSRVDARLH*TASSIV Trigger: CACAATACTGGATGCCGTCCAGTGCAGTCTGGCATC...CACTCTACTAGATTTAATCCTTCTGAAATCTTGTCTGACTATAGTCTTGTCTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000421801.6 |
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| CDS-3UTR GCA 90 bp | TCAGACAAGACTATAGTCAGACAAGATTTCAGAAGGATTAAATCTAGTAGAGTGCGGCATCCAGTATTGTaGAACCAGAACCATTACCTC | + |
|
Preference number: 4 (lower is better) Translates to: SDKTIVRQDFRRIKSSRVRHPVL*NQNHYL Trigger: GAGGTAATGGTTCTGGTTGCACAATACTGGATGCCG...CACTCTACTAGATTTAATCCTTCTGAAATCTTGTCTGACTATAGTCTTGTCTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000421801.6 |
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| CDS-3UTR GCA 90 bp | TCAGACAAGACTATAGTCAGACAAGATTTCAGAAGGATTAAATCTAGTAGAGTGATAAATAACACCTTCTaGCCCACTTCTCAGATGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SDKTIVRQDFRRIKSSRVINNTF*PTSQMC Trigger: ACACATCTGAGAAGTGGGGCAGAAGGTGTTATTTAT...CACTCTACTAGATTTAATCCTTCTGAAATCTTGTCTGACTATAGTCTTGTCTGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000421801.6 |
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| CDS GCA 90 bp | CTCAGGAGAAAAGAGGGCCAGGCCTCCTGGGATCCCTTTGGCCAATaGAGAGCTGTCCCGTGCTTGCACCGTGCCCTCTGCGCGTTCCGC | + |
|
Preference number: 5 (lower is better) Translates to: LRRKEGQASWDPFGQ*RAVPCLHRALCAFR Trigger: GCGGAACGCGCAGAGGGCACGGTGCAAGCACGGGACAGCTCTGCATTGGCCAAAGGGATCCCAGGAGGCCTGGCCCTCTTTTCTCCTGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000539408.5 |
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| CDS-3UTR CAA 90 bp | TTCGGCTGCGCAGCTGCCTGCGGTAGTTTTAACTACTTAAGCCGGTGTCCAAAAAGAGCTGTCCCGTGCTaGCACCGTGCCCTCTGCGCG | + |
|
Preference number: 5 (lower is better) Translates to: FGCAAACGSFNYLSRCPKRAVPC*HRALCA Trigger: CGCGCAGAGGGCACGGTGCAAGCACGGGACAGCTCT...TTTTGGACACCGGCTTAAGTAGTTAAAACTACCGCAGGCAGCTGCGCAGCCGAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000539408.5 |
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| CDS-3UTR CAA 90 bp | CCCTCCAATTCGGCTGCGCAGCCTGCATTAGAGAAACACCAGGCAAGTGGGCGGAGAAATCGACTGGGTTaGCGCAAACCTCACCGCACA | + |
|
Preference number: 5 (lower is better) Translates to: PSNSAAQPALEKHQASGRRNRLG*RKPHRT Trigger: TGTGCGGTGAGGTTTGCGCAAACCCAGTCGATTTCT...CCGCCCACTTGCCTGGTGTTTCTCTAATGCAGGCTGCGCAGCCGAATTGGAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000541960.5 |
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| CDS-3UTR CAA 90 bp | CTGCTGGTCCCCCTACCACTTAAGCCATATTCTGCCCTCCAATTCGGCTGCGCAGCCTTTTCCTGCTGGTaGGGATCCAGCCTCAGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: LLVPLPLKPYSALQFGCAAFSCW*GSSLRR Trigger: TCTCCTGAGGCTGGATCCCAACCAGCAGGAAAAGGC...TGCGCAGCCGAATTGGAGGGCAGAATATGGCTTAAGTGGTAGGGGGACCAGCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000542722.5 |
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| CDS-3UTR CAA 90 bp | GGAGCCTTCTCTACAATCACCCGAGAGCTCCACAGTCCTTCAGACAGGGTTGGACACAGGGGCCCTATTTaGTGCACCGCAACCCACACA | + |
|
Preference number: 5 (lower is better) Translates to: GAFSTITRELHSPSDRVGHRGPI*CTATHT Trigger: TGTGTGGGTTGCGGTGCACAAAATAGGGCCCCTGTG...TCCAACCCTGTCTGAAGGACTGTGGAGCTCTCGGGTGATTGTAGAGAAGGCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000541960.5 |
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| CDS-3UTR CAA 90 bp | CTCCAATTCGGCTGCGCAGCTGCCTGCGGTAGTTTTAACTACTTAAGCCGGTGTGCCTTTTCCTGCTGGTaGGGATCCAGCCTCAGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: LQFGCAAACGSFNYLSRCAFSCW*GSSLRR Trigger: TCTCCTGAGGCTGGATCCCAACCAGCAGGAAAAGGC...ACACCGGCTTAAGTAGTTAAAACTACCGCAGGCAGCTGCGCAGCCGAATTGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000539408.5 |
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| CDS-3UTR CAA 90 bp | AAAGGAAAAGGGTTACAAGAGGTTTCTACTGCTGGGCTAAGGCCCTGGTGGCTTCAGGCCAGGACTGTCTaGTGCTCCCCTAACCCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: KGKGLQEVSTAGLRPWWLQARTV*CSPNPL Trigger: CAGGGGGTTAGGGGAGCACAAGACAGTCCTGGCCTG...AAGCCACCAGGGCCTTAGCCCAGCAGTAGAAACCTCTTGTAACCCTTTTCCTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000541960.5 |
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| CDS-3UTR CAA 90 bp | TCAACGCATCTAGAACAAGGGCTAGAGGATGCCAGACTGCACTGGACGGCATCCGGACGGCATCCAGTATaGTGCAACCAGAACCATTAC | + |
|
Preference number: 5 (lower is better) Translates to: STHLEQGLEDARLHWTASGRHPV*CNQNHY Trigger: GTAATGGTTCTGGTTGCACAATACTGGATGCCGTCC...GGATGCCGTCCAGTGCAGTCTGGCATCCTCTAGCCCTTGTTCTAGATGCGTTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000545047.5 |
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| CDS-3UTR CAA 90 bp | AAAGGAAAAGGGTTACAAGAGGTTTCTACTGCTGGGCTAAGGCCCTGGTGGCTTGCAGAGAACGTGACCTaGTTTTCCAGGCCAGGACTG | + |
|
Preference number: 5 (lower is better) Translates to: KGKGLQEVSTAGLRPWWLAENVT*FSRPGL Trigger: CAGTCCTGGCCTGGAAAACAAGGTCACGTTCTCTGC...AAGCCACCAGGGCCTTAGCCCAGCAGTAGAAACCTCTTGTAACCCTTTTCCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000541960.5 |
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| CDS-3UTR CAA 90 bp | CAGGGTTGGAATTCCAGCTCAACCACAGATCAGCAATGTGAAACCTTTAGGAAGGAGGCAAGAGGGCTGTaGGGCAGAGAACGTGACCTT | + |
|
Preference number: 5 (lower is better) Translates to: QGWNSSSTTDQQCETFRKEARGL*GRERDL Trigger: AAGGTCACGTTCTCTGCCCAACAGCCCTCTTGCCTC...CTTCCTAAAGGTTTCACATTGCTGATCTGTGGTTGAGCTGGAATTCCAACCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000541960.5 |
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| CDS-3UTR CAA 90 bp | CAGCTGCTGGTCCCCCTACCACTTAAGCCATATTCTGCCCTCCAATTCGGCTGCAGTTACTGCATTTCTTaGTGCTTTGAATACTCCATC | + |
|
Preference number: 5 (lower is better) Translates to: QLLVPLPLKPYSALQFGCSYCIS*CFEYSI Trigger: GATGGAGTATTCAAAGCACAAAGAAATGCAGTAACT...GCAGCCGAATTGGAGGGCAGAATATGGCTTAAGTGGTAGGGGGACCAGCAGCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000540424.5 ENST00000541960.5 |
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| CDS-3UTR CAA 90 bp | GGAGCCTTCTCTACAATCACCCGAGAGCTCCACAGTCCTTCAGACAGGGTTGGAAGTTACTGCATTTCTTaGTGCTTTGAATACTCCATC | + |
|
Preference number: 5 (lower is better) Translates to: GAFSTITRELHSPSDRVGSYCIS*CFEYSI Trigger: GATGGAGTATTCAAAGCACAAAGAAATGCAGTAACT...TCCAACCCTGTCTGAAGGACTGTGGAGCTCTCGGGTGATTGTAGAGAAGGCTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000540424.5 ENST00000541960.5 |
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| CDS-3UTR CAA 90 bp | CCACAGATCAGCAATGTGAAACCTTTAGGAAGTTACTGCATTTCTTTGTGCTTTCAGTCTGGACGTCCATaGGCTCTGGCACTGAAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: PQISNVKPLGSYCISLCFQSGRP*ALALKG Trigger: GCCCTTCAGTGCCAGAGCCAATGGACGTCCAGACTG...AAAGCACAAAGAAATGCAGTAACTTCCTAAAGGTTTCACATTGCTGATCTGTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000541960.5 |
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| CDS-3UTR CAA 90 bp | CAACAGCTGCTGGTCCCCCTACCACTTAAGCCATATTCTGCCCTCCAATTCGGCGCATTTCTTTGTGCTTaGAATACTCCATCTGTAGAA | + |
|
Preference number: 5 (lower is better) Translates to: QQLLVPLPLKPYSALQFGAFLCA*NTPSVE Trigger: TTCTACAGATGGAGTATTCAAAGCACAAAGAAATGC...GCCGAATTGGAGGGCAGAATATGGCTTAAGTGGTAGGGGGACCAGCAGCTGTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000541960.5 |
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| CDS-3UTR CAA 90 bp | CCACAGTCCTTCAGACAGGGTTGGAATTCCAGCTCAACCACAGATCAGCAATGTCTTGGCCTGATGGCATaGACTTCATTATACAAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: PQSFRQGWNSSSTTDQQCLGLMA*TSLYKN Trigger: GTTCTTGTATAATGAAGTCAATGCCATCAGGCCAAG...ACATTGCTGATCTGTGGTTGAGCTGGAATTCCAACCCTGTCTGAAGGACTGTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000540424.5 ENST00000541960.5 |
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| CDS-3UTR CAA 90 bp | TCAGACAAGACTATAGTCAGACAAGATTTCAGAAGGATTAAATCTAGTAGAGTGGGACGGCATCCAGTATaGTGCAACCAGAACCATTAC | + |
|
Preference number: 5 (lower is better) Translates to: SDKTIVRQDFRRIKSSRVGRHPV*CNQNHY Trigger: GTAATGGTTCTGGTTGCACAATACTGGATGCCGTCC...CACTCTACTAGATTTAATCCTTCTGAAATCTTGTCTGACTATAGTCTTGTCTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000421801.6 |
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| CDS-3UTR CAA 90 bp | CCACAGATCAGCAATGTGAAACCTTTAGGAAGTTACTGCATTTCTTTGTGCTTTTCATTGCTCAAAAGATaGGTATCACCAGAACTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: PQISNVKPLGSYCISLCFSLLKR*VSPELG Trigger: GCCCAGTTCTGGTGATACCAATCTTTTGAGCAATGA...AAAGCACAAAGAAATGCAGTAACTTCCTAAAGGTTTCACATTGCTGATCTGTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000541960.5 |
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| CDS-3UTR CAA 90 bp | ATCAGCAATGTGAAACCTTTAGGAAGTTACTGCATTTCTTTGTGCTTTGAATACCTTGGCCTGATGGCATaGACTTCATTATACAAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: ISNVKPLGSYCISLCFEYLGLMA*TSLYKN Trigger: GTTCTTGTATAATGAAGTCAATGCCATCAGGCCAAG...GTATTCAAAGCACAAAGAAATGCAGTAACTTCCTAAAGGTTTCACATTGCTGAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000540424.5 ENST00000541960.5 |
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| CDS-3UTR CAA 90 bp | CCACAGATCAGCAATGTGAAACCTTTAGGAAGTTACTGCATTTCTTTGTGCTTTGCATTTCTTTGTGCTTaGAATACTCCATCTGAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: PQISNVKPLGSYCISLCFAFLCA*NTPSED Trigger: ATCTTCAGATGGAGTATTCAAAGCACAAAGAAATGC...AAAGCACAAAGAAATGCAGTAACTTCCTAAAGGTTTCACATTGCTGATCTGTGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540424.5 |
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| CDS GCA 72 bp | TCCTGGGATCCCTTTGGCCAATGCAGAGCTGTCCCGTaGTTGCACCGTGCCCTCTGCGCGTTCCGCTGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: SWDPFGQCRAVP*LHRALCAFRCP Trigger: GGGGCAGCGGAACGCGCAGAGGGCACGGTGCAAGCACGGGACAGCTCTGCATTGGCCAAAGGGATCCCAGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000539408.5 |
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| CDS GCA 72 bp | CTCCCTCAGCCGACGTCAAGGTGTGCTCAGAATAGCTaGAGAAACGTCCGCTCCGGGGGCAACAGCGCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: LPQPTSRCAQNS*RNVRSGGNSAG Trigger: CCCAGCGCTGTTGCCCCCGGAGCGGACGTTTCTGCAGCTATTCTGAGCACACCTTGACGTCGGCTGAGGGAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 10 transcripts: ENST00000266458.10 ENST00000421801.6 ENST00000537201.5 ENST00000539408.5 ENST00000540424.5 ENST00000541453.1 ENST00000542722.5 ENST00000545047.5 ENST00000545859.5 ENST00000629504.1 |
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| CDS GCA 72 bp | AAAGAGGGCCAGGCCTCCTGGGATCCCTTTGGCCAATaGAGAGCTGTCCCGTGCTTGCACCGTGCCCTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: KEGQASWDPFGQ*RAVPCLHRALC Trigger: GCAGAGGGCACGGTGCAAGCACGGGACAGCTCTGCATTGGCCAAAGGGATCCCAGGAGGCCTGGCCCTCTTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000539408.5 |
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| CDS GCA 72 bp | AGCCTTCTCTACAATCACCGCACAGCACAATGTCCCTaGGTTCTTAAAGGCAGCCAATCCATGGCCCCGATC | + |
|
Preference number: 6 (lower is better) Translates to: SLLYNHRTAQCP*VLKGSQSMAPI Trigger: GATCGGGGCCATGGATTGGCTGCCTTTAAGAACGCAGGGACATTGTGCTGTGCGGTGATTGTAGAGAAGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000539170.5 |
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