RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GAB3 (Homo sapiens)

Ensembl gene IDs: ENSG00000160219

Ensembl transcript IDs: ENST00000369568.8, ENST00000369575.7, ENST00000424127.3, ENST00000454973.1, ENST00000496390.5

Found 616 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTGGCTGTGTGTGGTGATGCAGAGCTGGCTGTGGGGCTTAGGGAGTaGGGAGCCCTCTCCTTGCTCTGTCCAGGCTCACTAAGGACCCTG +
Preference number: 1 (lower is better)
Translates to: LAVCGDAELAVGLRE*GALSLLCPGSLRTL
Trigger: CAGGGTCCTTAGTGAGCCTGGACAGAGCAAGGAGAGGGCTCCCCACTCCCTAAGCCCCACAGCCAGCTCTGCATCACCACACACAGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
3UTR CCA 90 bp AAGGCAGCTCCTCACAGGCTCTGGCTGTGTGTGGTGATGCAGAGCTaGCTGTGGGGCTTAGGGAGTGGGGAGCCCTCTCCTTGCTCTGTC +
Preference number: 1 (lower is better)
Translates to: KAAPHRLWLCVVMQS*LWGLGSGEPSPCSV
Trigger: GACAGAGCAAGGAGAGGGCTCCCCACTCCCTAAGCCCCACAGCCAGCTCTGCATCACCACACACAGCCAGAGCCTGTGAGGAGCTGCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
3UTR CCA 90 bp CCCAAGGAAAGCTTAACTCCCAGTGCTCCTGGGTTTGTCACCTTCTaGACTTGCAGGCTTGAGACCCTTGGGTCCCCCGTCCTGCACTGG +
Preference number: 1 (lower is better)
Translates to: PKESLTPSAPGFVTF*TCRLETLGSPVLHW
Trigger: CCAGTGCAGGACGGGGGACCCAAGGGTCTCAAGCCTGCAAGTCCAGAAGGTGACAAACCCAGGAGCACTGGGAGTTAAGCTTTCCTTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
3UTR CCA 90 bp CTCTTTGCAAGTCACATGGGGAAGAAGGCAGCTCCTCACAGGCTCTaGCTGTGTGTGGTGATGCAGAGCTGGCTGTGGGGCTTAGGGAGT +
Preference number: 1 (lower is better)
Translates to: LFASHMGKKAAPHRL*LCVVMQSWLWGLGS
Trigger: ACTCCCTAAGCCCCACAGCCAGCTCTGCATCACCACACACAGCCAGAGCCTGTGAGGAGCTGCCTTCTTCCCCATGTGACTTGCAAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
3UTR TCA 90 bp CTACCCTCCATGGGAACTAGCAGTTTGAAGCCCTGGTTTCTTGCCTaGGACTCTTTGCAAGTCACATGGGGAAGAAGGCAGCTCCTCACA +
Preference number: 1 (lower is better)
Translates to: LPSMGTSSLKPWFLA*DSLQVTWGRRQLLT
Trigger: TGTGAGGAGCTGCCTTCTTCCCCATGTGACTTGCAAAGAGTCTCAGGCAAGAAACCAGGGCTTCAAACTGCTAGTTCCCATGGAGGGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
3UTR GCA 90 bp GTAGGTGCTCAGAAGGATCAAGAATGGACACTAAATAACACTTCATaGCCAACTGACACCTTCATTCTGGGTCTCCTGGACCCCAGGACC +
Preference number: 1 (lower is better)
Translates to: VGAQKDQEWTLNNTS*PTDTFILGLLDPRT
Trigger: GGTCCTGGGGTCCAGGAGACCCAGAATGAAGGTGTCAGTTGGGCATGAAGTGTTATTTAGTGTCCATTCTTGATCCTTCTGAGCACCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
3UTR GCA 90 bp AGATCCCTATTGAAAGGGAGACAGGATGACTACTCATTTTGTGTCTaGAGGTGTTTCCCACATGTCTCCAAGGCTCACCCAATTAATCCA +
Preference number: 1 (lower is better)
Translates to: RSLLKGRQDDYSFCV*RCFPHVSKAHPINP
Trigger: TGGATTAATTGGGTGAGCCTTGGAGACATGTGGGAAACACCTGCAGACACAAAATGAGTAGTCATCCTGTCTCCCTTTCAATAGGGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
3UTR GCA 90 bp CTCATAAAGAAGACACAATCTCAGTCAGAATGCAGGACCAGTATCTaGTTAGTTTCCAGCTGTAGGTGCTCAGAAGGATCAAGAATGGAC +
Preference number: 1 (lower is better)
Translates to: LIKKTQSQSECRTSI*LVSSCRCSEGSRMD
Trigger: GTCCATTCTTGATCCTTCTGAGCACCTACAGCTGGAAACTAAGCAGATACTGGTCCTGCATTCTGACTGAGATTGTGTCTTCTTTATGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
3UTR TCA 90 bp AGTATCAAAACACCTGTTCAGATCCCTATTGAAAGGGAGACAGGATaGCTACTCATTTTGTGTCTGCAGGTGTTTCCCACATGTCTCCAA +
Preference number: 1 (lower is better)
Translates to: SIKTPVQIPIERETG*LLILCLQVFPTCLQ
Trigger: TTGGAGACATGTGGGAAACACCTGCAGACACAAAATGAGTAGTCATCCTGTCTCCCTTTCAATAGGGATCTGAACAGGTGTTTTGATACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
3UTR TCA 90 bp AATCCATTTTGTCAAAATCCTCAGAGGAAGTATGAGGTAGAGGAATaGGCTTGCAATTGGCAGCCTGAACAACTCTATTCTCTAAGCTGG +
Preference number: 1 (lower is better)
Translates to: NPFCQNPQRKYEVEE*ACNWQPEQLYSLSW
Trigger: CCAGCTTAGAGAATAGAGTTGTTCAGGCTGCCAATTGCAAGCTCATTCCTCTACCTCATACTTCCTCTGAGGATTTTGACAAAATGGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
3UTR TCA 90 bp TACAGAAAACGATGTGGGGTTAATTGCTGCATTGCCCTGTTATGCTaGTTCCCACATCTTGTAGGTCTCTGGGATCATTTCTGTAACAAA +
Preference number: 1 (lower is better)
Translates to: YRKRCGVNCCIALLC*FPHLVGLWDHFCNK
Trigger: TTTGTTACAGAAATGATCCCAGAGACCTACAAGATGTGGGAATCAGCATAACAGGGCAATGCAGCAATTAACCCCACATCGTTTTCTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
3UTR TCA 90 bp ACATGCACATCTTTCAAGTATCAAAACACCTGTTCAGATCCCTATTaGAAGGGAGACAGGATGACTACTCATTTTGTGTCTGCAGGTGTT +
Preference number: 1 (lower is better)
Translates to: TCTSFKYQNTCSDPY*KGDRMTTHFVSAGV
Trigger: AACACCTGCAGACACAAAATGAGTAGTCATCCTGTCTCCCTTTCAATAGGGATCTGAACAGGTGTTTTGATACTTGAAAGATGTGCATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
3UTR CCA 90 bp ATCATTCTCATTGAAGCACAGGAGAGAAGTCAGAATTTCAGGTATTaGAGTCAAACGATAAAATCCTGTTGGTGGCAACACTCACTCCAA +
Preference number: 1 (lower is better)
Translates to: IILIEAQERSQNFRY*SQTIKSCWWQHSLQ
Trigger: TTGGAGTGAGTGTTGCCACCAACAGGATTTTATCGTTTGACTCCAATACCTGAAATTCTGACTTCTCTCCTGTGCTTCAATGAGAATGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
3UTR CAA 90 bp GTGCTCCTGGGTTTGTCACCTTCTGGACTTGCAGGCTTGAGACCCTaGGGTCCCCCGTCCTGCACTGGACGACCCCTGACTGGGAGGAAT +
Preference number: 2 (lower is better)
Translates to: VLLGLSPSGLAGLRP*GPPSCTGRPLTGRN
Trigger: ATTCCTCCCAGTCAGGGGTCGTCCAGTGCAGGACGGGGGACCCAAGGGTCTCAAGCCTGCAAGTCCAGAAGGTGACAAACCCAGGAGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
3UTR-3UTR GCA 90 bp GGCTTGAGACCCTTGGGTCCCCCGTCCTGCACTGGACGACCCCTGACTGGGAGGTTATGGTGCCTTTGCTaGTGTCAGCTCAAAAACTAC +
Preference number: 2 (lower is better)
Translates to: GLRPLGPPSCTGRPLTGRLWCLC*CQLKNY
Trigger: GTAGTTTTTGAGCTGACAGCAGCAAAGGCACCATAA...CCTCCCAGTCAGGGGTCGTCCAGTGCAGGACGGGGGACCCAAGGGTCTCAAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
3UTR-3UTR GCA 90 bp TGGACTTGCAGGCTTGAGACCCTTGGGTCCCCCGTCCTGCACTGGACGACCCCTAAAGCAGGACATAATTaGCTACACTCTGGAAATGAG +
Preference number: 2 (lower is better)
Translates to: WTCRLETLGSPVLHWTTPKAGHN*LHSGNE
Trigger: CTCATTTCCAGAGTGTAGGCAATTATGTCCTGCTTT...AGGGGTCGTCCAGTGCAGGACGGGGGACCCAAGGGTCTCAAGCCTGCAAGTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
3UTR-3UTR CCA 90 bp TGGACTTGCAGGCTTGAGACCCTTGGGTCCCCCGTCCTGCACTGGACGACCCCTATAAAATCCTGTTGGTaGCAACACTCACTCCAATCT +
Preference number: 2 (lower is better)
Translates to: WTCRLETLGSPVLHWTTPIKSCW*QHSLQS
Trigger: AGATTGGAGTGAGTGTTGCCACCAACAGGATTTTAT...AGGGGTCGTCCAGTGCAGGACGGGGGACCCAAGGGTCTCAAGCCTGCAAGTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
3UTR-3UTR CCA 90 bp TGGACTTGCAGGCTTGAGACCCTTGGGTCCCCCGTCCTGCACTGGACGACCCCTCAATATTTTGACTTATaGTGCCTTTGCTGCTGTCAG +
Preference number: 2 (lower is better)
Translates to: WTCRLETLGSPVLHWTTPQYFDL*CLCCCQ
Trigger: CTGACAGCAGCAAAGGCACCATAAGTCAAAATATTG...AGGGGTCGTCCAGTGCAGGACGGGGGACCCAAGGGTCTCAAGCCTGCAAGTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
3UTR-3UTR TCA 90 bp CTTGAGACCCTTGGGTCCCCCGTCCTGCACTGGACGACCCCTGACTGGGAGGAAATTTATCATTCTCATTaGAGCACAGGAGAGAAGTCA +
Preference number: 2 (lower is better)
Translates to: LETLGSPVLHWTTPDWEEIYHSH*STGEKS
Trigger: TGACTTCTCTCCTGTGCTTCAATGAGAATGATAAAT...TTCCTCCCAGTCAGGGGTCGTCCAGTGCAGGACGGGGGACCCAAGGGTCTCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
3UTR-3UTR GCA 90 bp TGGACTTGCAGGCTTGAGACCCTTGGGTCCCCCGTCCTGCACTGGACGACCCCTAATGTCACCAGAACCTaGTTCTTTGAAAATCAAAAC +
Preference number: 2 (lower is better)
Translates to: WTCRLETLGSPVLHWTTPNVTRT*FFENQN
Trigger: GTTTTGATTTTCAAAGAAGCAGGTTCTGGTGACATT...AGGGGTCGTCCAGTGCAGGACGGGGGACCCAAGGGTCTCAAGCCTGCAAGTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
3UTR-3UTR CCA 90 bp TTGCTGCATTGCCCTGTTATGCTGATTCCCACATCTTGTAGGTCTCTGGGATCAGAGGCTGGAACAAGATaGTCTCCAGAGGCCCCTTTG +
Preference number: 2 (lower is better)
Translates to: LLHCPVMLIPTSCRSLGSEAGTR*SPEAPL
Trigger: CAAAGGGGCCTCTGGAGACCATCTTGTTCCAGCCTC...TGATCCCAGAGACCTACAAGATGTGGGAATCAGCATAACAGGGCAATGCAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
3UTR-3UTR CCA 90 bp TCTCAGTCAGAATGCAGGACCAGTATCTGCTTAGTTTCCAGCTGTAGGTGCTCAACACGAGACGATGCGTaGGAAAAGGCCAAGAGCAGC +
Preference number: 2 (lower is better)
Translates to: SQSECRTSICLVSSCRCSTRDDA*EKAKSS
Trigger: GCTGCTCTTGGCCTTTTCCCACGCATCGTCTCGTGT...TGAGCACCTACAGCTGGAAACTAAGCAGATACTGGTCCTGCATTCTGACTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
3UTR-3UTR CCA 90 bp GAGAGCCTTCAGTTTCAACTCGGAACTTTTAAAGGTCATGATTCAGCTGATCCTGTGGGGCTTAGGGAGTaGGGAGCCCTCTCCTTGCTC +
Preference number: 2 (lower is better)
Translates to: ESLQFQLGTFKGHDSADPVGLRE*GALSLL
Trigger: GAGCAAGGAGAGGGCTCCCCACTCCCTAAGCCCCAC...AGGATCAGCTGAATCATGACCTTTAAAAGTTCCGAGTTGAAACTGAAGGCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
3UTR-3UTR TCA 90 bp TCTCAGTCAGAATGCAGGACCAGTATCTGCTTAGTTTCCAGCTGTAGGTGCTCAACTTATCTCAGAGCCTaGGATCCATTGCCCCTGTCA +
Preference number: 2 (lower is better)
Translates to: SQSECRTSICLVSSCRCSTYLRA*DPLPLS
Trigger: TGACAGGGGCAATGGATCTCAGGCTCTGAGATAAGT...TGAGCACCTACAGCTGGAAACTAAGCAGATACTGGTCCTGCATTCTGACTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
3UTR-3UTR CCA 90 bp GCTGTAGGTGCTCAGAAGGATCAAGAATGGACACTAAATAACACTTCATGCCCAGAGGCTGGAACAAGATaGTCTCCAGAGGCCCCTTTG +
Preference number: 2 (lower is better)
Translates to: AVGAQKDQEWTLNNTSCPEAGTR*SPEAPL
Trigger: CAAAGGGGCCTCTGGAGACCATCTTGTTCCAGCCTC...TGGGCATGAAGTGTTATTTAGTGTCCATTCTTGATCCTTCTGAGCACCTACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
3UTR-3UTR TCA 90 bp CTACTGATGGGAGAGTTCCAGTTGAACATCGCAGAAAGAAACCCTCACTTGACAACTTATCTCAGAGCCTaGGATCCATTGCCCCTGTCA +
Preference number: 2 (lower is better)
Translates to: LLMGEFQLNIAERNPHLTTYLRA*DPLPLS
Trigger: TGACAGGGGCAATGGATCTCAGGCTCTGAGATAAGT...TGTCAAGTGAGGGTTTCTTTCTGCGATGTTCAACTGGAACTCTCCCATCAGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
3UTR-3UTR CCA 90 bp TCTCAGTCAGAATGCAGGACCAGTATCTGCTTAGTTTCCAGCTGTAGGTGCTCAACTGTCTTCAGAGGCTaGAACAAGATGGTCTCCAGA +
Preference number: 2 (lower is better)
Translates to: SQSECRTSICLVSSCRCSTVFRG*NKMVSR
Trigger: TCTGGAGACCATCTTGTTCCAGCCTCTGAAGACAGT...TGAGCACCTACAGCTGGAAACTAAGCAGATACTGGTCCTGCATTCTGACTGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
3UTR-3UTR CCA 90 bp AAAAGAAGACTTTGGCATTCACTTACCTGTGGGGTGATTGGAAACCCTGAAATCACACGAGACGATGCGTaGGAAAAGGCCAAGAGCAGC +
Preference number: 2 (lower is better)
Translates to: KRRLWHSLTCGVIGNPEITRDDA*EKAKSS
Trigger: GCTGCTCTTGGCCTTTTCCCACGCATCGTCTCGTGT...GATTTCAGGGTTTCCAATCACCCCACAGGTAAGTGAATGCCAAAGTCTTCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
3UTR-3UTR CCA 90 bp GAGAGCCTTCAGTTTCAACTCGGAACTTTTAAAGGTCATGATTCAGCTGATCCTACACGAGACGATGCGTaGGAAAAGGCCAAGAGCAGC +
Preference number: 2 (lower is better)
Translates to: ESLQFQLGTFKGHDSADPTRDDA*EKAKSS
Trigger: GCTGCTCTTGGCCTTTTCCCACGCATCGTCTCGTGT...AGGATCAGCTGAATCATGACCTTTAAAAGTTCCGAGTTGAAACTGAAGGCTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
3UTR-3UTR TCA 90 bp TTGCTGCATTGCCCTGTTATGCTGATTCCCACATCTTGTAGGTCTCTGGGATCAGGTGGGTCAATGGAGTaGCATTTCACTACTGACATA +
Preference number: 2 (lower is better)
Translates to: LLHCPVMLIPTSCRSLGSGGSME*HFTTDI
Trigger: TATGTCAGTAGTGAAATGTCACTCCATTGACCCACC...TGATCCCAGAGACCTACAAGATGTGGGAATCAGCATAACAGGGCAATGCAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
3UTR-3UTR GCA 90 bp TTGCTGCATTGCCCTGTTATGCTGATTCCCACATCTTGTAGGTCTCTGGGATCAGACTTATGGTGCCTTTaGTGCTGTCAGCTCAAAAAC +
Preference number: 2 (lower is better)
Translates to: LLHCPVMLIPTSCRSLGSDLWCL*CCQLKN
Trigger: GTTTTTGAGCTGACAGCAGCAAAGGCACCATAAGTC...TGATCCCAGAGACCTACAAGATGTGGGAATCAGCATAACAGGGCAATGCAGCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
3UTR CAA 90 bp ACAACTGCCCCAACTGCACTGACTATCATGGGCCTGACTGCCAATTaGATCTATCCTCATAAAGAAGACACAATCTCAGTCAGAATGCAG +
Preference number: 2 (lower is better)
Translates to: TTAPTALTIMGLTAN*IYPHKEDTISVRMQ
Trigger: CTGCATTCTGACTGAGATTGTGTCTTCTTTATGAGGATAGATCAAATTGGCAGTCAGGCCCATGATAGTCAGTGCAGTTGGGGCAGTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
3UTR-3UTR GCA 90 bp CACATGTCTCCAAGGCTCACCCAATTAATCCATTTTGTCAAAATCCTCAGAGGAGAGCCTGAGATCCATTaGCCCTGTCACTTGTCTTTC +
Preference number: 2 (lower is better)
Translates to: HMSPRLTQLIHFVKILRGEPEIH*PCHLSF
Trigger: GAAAGACAAGTGACAGGGGCAATGGATCTCAGGCTC...TCCTCTGAGGATTTTGACAAAATGGATTAATTGGGTGAGCCTTGGAGACATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
3UTR-3UTR CCA 90 bp CATCTCCACCAAAACCAATATTTTGACTTATGGTGCCTTTGCTGCTGTCAGCTCACTGTCTTCAGAGGCTaGAACAAGATGGTCTCCAGA +
Preference number: 2 (lower is better)
Translates to: HLHQNQYFDLWCLCCCQLTVFRG*NKMVSR
Trigger: TCTGGAGACCATCTTGTTCCAGCCTCTGAAGACAGT...GAGCTGACAGCAGCAAAGGCACCATAAGTCAAAATATTGGTTTTGGTGGAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
3UTR-3UTR CCA 90 bp GCTGTAGGTGCTCAGAAGGATCAAGAATGGACACTAAATAACACTTCATGCCCAGCAGAAGGGAGCAATTaGCTGGGAAACCTAAGAATG +
Preference number: 2 (lower is better)
Translates to: AVGAQKDQEWTLNNTSCPAEGSN*LGNLRM
Trigger: CATTCTTAGGTTTCCCAGCCAATTGCTCCCTTCTGC...TGGGCATGAAGTGTTATTTAGTGTCCATTCTTGATCCTTCTGAGCACCTACAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
3UTR-3UTR CCA 90 bp TTTTTAAGTAATCACATCCAAACAGGTCACACTACCCATGTGTGTTTCTTCATGGTGGTGATGCAGAGCTaGCTGTGGGGCTTAGGGAGT +
Preference number: 2 (lower is better)
Translates to: FLSNHIQTGHTTHVCFFMVVMQS*LWGLGS
Trigger: ACTCCCTAAGCCCCACAGCCAGCTCTGCATCACCAC...CATGAAGAAACACACATGGGTAGTGTGACCTGTTTGGATGTGATTACTTAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
3UTR CAA 90 bp CTGATGGGAGAGTTCCAGTTGAACATCGCAGAAAGAAACCCTCACTaGACATGCACATCTTTCAAGTATCAAAACACCTGTTCAGATCCC +
Preference number: 2 (lower is better)
Translates to: LMGEFQLNIAERNPH*TCTSFKYQNTCSDP
Trigger: GGGATCTGAACAGGTGTTTTGATACTTGAAAGATGTGCATGTCAAGTGAGGGTTTCTTTCTGCGATGTTCAACTGGAACTCTCCCATCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
3UTR-3UTR TCA 90 bp GACGCCTTCATTATAAAGTGGGAGTGTTTGTACTCTCAGTACCTAGTCACTTCTGCCACCAGTGTCATCTaGTATACTTATCTCAGAGCC +
Preference number: 2 (lower is better)
Translates to: DAFIIKWECLYSQYLVTSATSVI*YTYLRA
Trigger: GGCTCTGAGATAAGTATATCAGATGACACTGGTGGC...AGAAGTGACTAGGTACTGAGAGTACAAACACTCCCACTTTATAATGAAGGCGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
3UTR-3UTR TCA 90 bp CACATGTCTCCAAGGCTCACCCAATTAATCCATTTTGTCAAAATCCTCAGAGGAGCCACCAGTGTCATCTaGTATACTTATCTCAGAGCC +
Preference number: 2 (lower is better)
Translates to: HMSPRLTQLIHFVKILRGATSVI*YTYLRA
Trigger: GGCTCTGAGATAAGTATATCAGATGACACTGGTGGC...TCCTCTGAGGATTTTGACAAAATGGATTAATTGGGTGAGCCTTGGAGACATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
3UTR-3UTR TCA 90 bp GGTGTTTCCCACATGTCTCCAAGGCTCACCCAATTAATCCATTTTGTCAAAATCTATGAGGTAGAGGAATaGGCTTGCAATTGGCAGCCT +
Preference number: 2 (lower is better)
Translates to: GVSHMSPRLTQLIHFVKIYEVEE*ACNWQP
Trigger: AGGCTGCCAATTGCAAGCTCATTCCTCTACCTCATA...GATTTTGACAAAATGGATTAATTGGGTGAGCCTTGGAGACATGTGGGAAACACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
3UTR-3UTR TCA 90 bp CATCTCCACCAAAACCAATATTTTGACTTATGGTGCCTTTGCTGCTGTCAGCTCGAAAGGGAGACAGGATaGCTACTCATTTTGTGTCTG +
Preference number: 2 (lower is better)
Translates to: HLHQNQYFDLWCLCCCQLERETG*LLILCL
Trigger: CAGACACAAAATGAGTAGTCATCCTGTCTCCCTTTC...GAGCTGACAGCAGCAAAGGCACCATAAGTCAAAATATTGGTTTTGGTGGAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
3UTR-3UTR TCA 90 bp TTGCTCTGTCCAGGCTCACTAAGGACCCTGAACTCAGTTAAAATACTTAGAAATCACTTCATGCCCAACTaGCACCTTCATTCTGGGTCT +
Preference number: 2 (lower is better)
Translates to: LLCPGSLRTLNSVKILRNHFMPN*HLHSGS
Trigger: AGACCCAGAATGAAGGTGTCAGTTGGGCATGAAGTG...ATTTCTAAGTATTTTAACTGAGTTCAGGGTCCTTAGTGAGCCTGGACAGAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
3UTR-3UTR TCA 90 bp CATCCTCTAGCAGTTTTATCAAAGCAGGACATAATTGCCTACACTCTGGAAATGCCCTGGTTTCTTGCCTaGGACTCTTTGCAAGTCACA +
Preference number: 2 (lower is better)
Translates to: HPLAVLSKQDIIAYTLEMPWFLA*DSLQVT
Trigger: TGTGACTTGCAAAGAGTCTCAGGCAAGAAACCAGGG...CATTTCCAGAGTGTAGGCAATTATGTCCTGCTTTGATAAAACTGCTAGAGGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
3UTR-3UTR GCA 90 bp GCTCTCTCTCACACACACACATCGATCATCTCCACCAAAACCAATATTTTGACTACTCACTCCAATCTTTaGTCCAATAGGACAGAGGGG +
Preference number: 2 (lower is better)
Translates to: ALSHTHTSIISTKTNILTTHSNL*SNRTEG
Trigger: CCCCTCTGTCCTATTGGAGCAAAGATTGGAGTGAGT...AGTCAAAATATTGGTTTTGGTGGAGATGATCGATGTGTGTGTGTGAGAGAGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
3UTR-3UTR GCA 90 bp TACTCTCAGTACCTAGTCACTTCTAAAGCAGAAGGGAGCAATTGGCTGGGAAACTACTCATTTTGTGTCTaGAGGTGTTTCCCACATGTC +
Preference number: 2 (lower is better)
Translates to: YSQYLVTSKAEGSNWLGNYSFCV*RCFPHV
Trigger: GACATGTGGGAAACACCTGCAGACACAAAATGAGTA...GTTTCCCAGCCAATTGCTCCCTTCTGCTTTAGAAGTGACTAGGTACTGAGAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
3UTR-3UTR CCA 90 bp CTACTCATTTTGTGTCTGCAGGTGTTTCCCACATGTCTCCAAGGCTCACCCAATATAAAATCCTGTTGGTaGCAACACTCACTCCAATCT +
Preference number: 2 (lower is better)
Translates to: LLILCLQVFPTCLQGSPNIKSCW*QHSLQS
Trigger: AGATTGGAGTGAGTGTTGCCACCAACAGGATTTTAT...ATTGGGTGAGCCTTGGAGACATGTGGGAAACACCTGCAGACACAAAATGAGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
3UTR-3UTR CCA 90 bp GACGCCTTCATTATAAAGTGGGAGTGTTTGTACTCTCAGTACCTAGTCACTTCTACTGTCTTCAGAGGCTaGAACAAGATGGTCTCCAGA +
Preference number: 2 (lower is better)
Translates to: DAFIIKWECLYSQYLVTSTVFRG*NKMVSR
Trigger: TCTGGAGACCATCTTGTTCCAGCCTCTGAAGACAGT...AGAAGTGACTAGGTACTGAGAGTACAAACACTCCCACTTTATAATGAAGGCGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
3UTR-3UTR CCA 90 bp TCTCAGTCAGAATGCAGGACCAGTATCTGCTTAGTTTCCAGCTGTAGGTGCTCAGCCTTCATTATAAAGTaGGAGTGTTTGTACTCTCAG +
Preference number: 2 (lower is better)
Translates to: SQSECRTSICLVSSCRCSAFIIK*ECLYSQ
Trigger: CTGAGAGTACAAACACTCCCACTTTATAATGAAGGC...TGAGCACCTACAGCTGGAAACTAAGCAGATACTGGTCCTGCATTCTGACTGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
3UTR-3UTR CCA 90 bp CATCCTCTAGCAGTTTTATCAAAGCAGGACATAATTGCCTACACTCTGGAAATGTCTTTGCAAGTCACATaGGGAAGAAGGCAGCTCCTC +
Preference number: 2 (lower is better)
Translates to: HPLAVLSKQDIIAYTLEMSLQVT*GRRQLL
Trigger: GAGGAGCTGCCTTCTTCCCCATGTGACTTGCAAAGA...CATTTCCAGAGTGTAGGCAATTATGTCCTGCTTTGATAAAACTGCTAGAGGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
3UTR CAA 90 bp GAGAAGTCAGAATTTCAGGTATTGGAGTCAAACGATAAAATCCTGTaGGTGGCAACACTCACTCCAATCTTTGCTCCAATAGGACAGAGG +
Preference number: 2 (lower is better)
Translates to: EKSEFQVLESNDKIL*VATLTPIFAPIGQR
Trigger: CCTCTGTCCTATTGGAGCAAAGATTGGAGTGAGTGTTGCCACCAACAGGATTTTATCGTTTGACTCCAATACCTGAAATTCTGACTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
3UTR CAA 90 bp CTCTCTCACACACACACATCGATCATCTCCACCAAAACCAATATTTaGACTTATGGTGCCTTTGCTGCTGTCAGCTCAAAAACTACCTGT +
Preference number: 2 (lower is better)
Translates to: LSHTHTSIISTKTNI*TYGAFAAVSSKTTC
Trigger: ACAGGTAGTTTTTGAGCTGACAGCAGCAAAGGCACCATAAGTCAAAATATTGGTTTTGGTGGAGATGATCGATGTGTGTGTGTGAGAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
3UTR-3UTR TCA 90 bp GCTGTAGGTGCTCAGAAGGATCAAGAATGGACACTAAATAACACTTCATGCCCAATTCTCTCTTGGTTTTaGCCTGTGTTGACCATCAGT +
Preference number: 2 (lower is better)
Translates to: AVGAQKDQEWTLNNTSCPILSWF*PVLTIS
Trigger: ACTGATGGTCAACACAGGTCAAAACCAAGAGAGAAT...TGGGCATGAAGTGTTATTTAGTGTCCATTCTTGATCCTTCTGAGCACCTACAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
3UTR-3UTR TCA 90 bp TTGCTGCATTGCCCTGTTATGCTGATTCCCACATCTTGTAGGTCTCTGGGATCAACTTCTTGTATGGTCTaGAAAAAGAAGACTTTGGCA +
Preference number: 2 (lower is better)
Translates to: LLHCPVMLIPTSCRSLGSTSCMV*KKKTLA
Trigger: TGCCAAAGTCTTCTTTTTTCAGACCATACAAGAAGT...TGATCCCAGAGACCTACAAGATGTGGGAATCAGCATAACAGGGCAATGCAGCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
3UTR-3UTR GCA 90 bp TCAGAATTTCAGGTATTGGAGTCAAACGATAAAATCCTGTTGGTGGCAACACTCCCTCCGGAAGGCAACTaGTTCCTTCTTTTCTTCCTT +
Preference number: 2 (lower is better)
Translates to: SEFQVLESNDKILLVATLPPEGN*FLLFFL
Trigger: AAGGAAGAAAAGAAGGAAGCAGTTGCCTTCCGGAGG...GAGTGTTGCCACCAACAGGATTTTATCGTTTGACTCCAATACCTGAAATTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
3UTR-3UTR GCA 90 bp TTGCTCTGTCCAGGCTCACTAAGGACCCTGAACTCAGTTAAAATACTTAGAAATACTCACTCCAATCTTTaGTCCAATAGGACAGAGGGG +
Preference number: 2 (lower is better)
Translates to: LLCPGSLRTLNSVKILRNTHSNL*SNRTEG
Trigger: CCCCTCTGTCCTATTGGAGCAAAGATTGGAGTGAGT...ATTTCTAAGTATTTTAACTGAGTTCAGGGTCCTTAGTGAGCCTGGACAGAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
3UTR-3UTR GCA 90 bp CATCCTCTAGCAGTTTTATCAAAGCAGGACATAATTGCCTACACTCTGGAAATGACTCACTCCAATCTTTaGTCCAATAGGACAGAGGGG +
Preference number: 2 (lower is better)
Translates to: HPLAVLSKQDIIAYTLEMTHSNL*SNRTEG
Trigger: CCCCTCTGTCCTATTGGAGCAAAGATTGGAGTGAGT...CATTTCCAGAGTGTAGGCAATTATGTCCTGCTTTGATAAAACTGCTAGAGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
3UTR-3UTR GCA 90 bp ATCGTTATGCTTTTGCATAGCCATCCTCTAGCAGTTTTATCAAAGCAGGACATAGAGCCTGAGATCCATTaGCCCTGTCACTTGTCTTTC +
Preference number: 2 (lower is better)
Translates to: IVMLLHSHPLAVLSKQDIEPEIH*PCHLSF
Trigger: GAAAGACAAGTGACAGGGGCAATGGATCTCAGGCTC...TATGTCCTGCTTTGATAAAACTGCTAGAGGATGGCTATGCAAAAGCATAACGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
3UTR-3UTR GCA 90 bp AAAAGAAGACTTTGGCATTCACTTACCTGTGGGGTGATTGGAAACCCTGAAATCGTTTCCAGCTGTAGGTaGTCAGAAGGATCAAGAATG +
Preference number: 2 (lower is better)
Translates to: KRRLWHSLTCGVIGNPEIVSSCR*SEGSRM
Trigger: CATTCTTGATCCTTCTGAGCACCTACAGCTGGAAAC...GATTTCAGGGTTTCCAATCACCCCACAGGTAAGTGAATGCCAAAGTCTTCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
3UTR-3UTR GCA 90 bp ATCGTTATGCTTTTGCATAGCCATCCTCTAGCAGTTTTATCAAAGCAGGACATATACAACTGCCCCAACTaGACTGACTATCATGGGCCT +
Preference number: 2 (lower is better)
Translates to: IVMLLHSHPLAVLSKQDIYNCPN*TDYHGP
Trigger: AGGCCCATGATAGTCAGTGCAGTTGGGGCAGTTGTA...TATGTCCTGCTTTGATAAAACTGCTAGAGGATGGCTATGCAAAAGCATAACGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
3UTR-3UTR CCA 90 bp GTAGGTGCTCAGAAGGATCAAGAATGGACACTAAATAACACTTCATGCCCAACTCTCTATTCTCTAAGCTaGACTCTGGGTCTTGGCTTT +
Preference number: 2 (lower is better)
Translates to: VGAQKDQEWTLNNTSCPTLYSLS*TLGLGF
Trigger: AAAGCCAAGACCCAGAGTCCAGCTTAGAGAATAGAG...AGTTGGGCATGAAGTGTTATTTAGTGTCCATTCTTGATCCTTCTGAGCACCTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
3UTR-3UTR CCA 90 bp CATCCTCTAGCAGTTTTATCAAAGCAGGACATAATTGCCTACACTCTGGAAATGGCAGAAGGGAGCAATTaGCTGGGAAACCTAAGAATG +
Preference number: 2 (lower is better)
Translates to: HPLAVLSKQDIIAYTLEMAEGSN*LGNLRM
Trigger: CATTCTTAGGTTTCCCAGCCAATTGCTCCCTTCTGC...CATTTCCAGAGTGTAGGCAATTATGTCCTGCTTTGATAAAACTGCTAGAGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
3UTR-3UTR CCA 90 bp CATCTCCACCAAAACCAATATTTTGACTTATGGTGCCTTTGCTGCTGTCAGCTCTTTTCGGTGGGTCAATaGAGTGACATTTCACTACTG +
Preference number: 2 (lower is better)
Translates to: HLHQNQYFDLWCLCCCQLFSVGQ*SDISLL
Trigger: CAGTAGTGAAATGTCACTCCATTGACCCACCGAAAA...GAGCTGACAGCAGCAAAGGCACCATAAGTCAAAATATTGGTTTTGGTGGAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
3UTR-3UTR TCA 90 bp GAGAGCCTTCAGTTTCAACTCGGAACTTTTAAAGGTCATGATTCAGCTGATCCTATTCTCTCTTGGTTTTaGCCTGTGTTGACCATCAGT +
Preference number: 2 (lower is better)
Translates to: ESLQFQLGTFKGHDSADPILSWF*PVLTIS
Trigger: ACTGATGGTCAACACAGGTCAAAACCAAGAGAGAAT...AGGATCAGCTGAATCATGACCTTTAAAAGTTCCGAGTTGAAACTGAAGGCTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
3UTR-3UTR TCA 90 bp GAGAGCCTTCAGTTTCAACTCGGAACTTTTAAAGGTCATGATTCAGCTGATCCTTTCTGGCCAAGACCTTaGAAACTACACATTCTCTCT +
Preference number: 2 (lower is better)
Translates to: ESLQFQLGTFKGHDSADPFWPRP*KLHILS
Trigger: AGAGAGAATGTGTAGTTTTCAAGGTCTTGGCCAGAA...AGGATCAGCTGAATCATGACCTTTAAAAGTTCCGAGTTGAAACTGAAGGCTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
3UTR-3UTR TCA 90 bp ATTCCATTTTTAAGTAATCACATCCAAACAGGTCACACTACCCATGTGTGTTTCACTTATCTCAGAGCCTaGGATCCATTGCCCCTGTCA +
Preference number: 2 (lower is better)
Translates to: IPFLSNHIQTGHTTHVCFTYLRA*DPLPLS
Trigger: TGACAGGGGCAATGGATCTCAGGCTCTGAGATAAGT...GAAACACACATGGGTAGTGTGACCTGTTTGGATGTGATTACTTAAAAATGGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
3UTR-3UTR TCA 90 bp TTGCTCTGTCCAGGCTCACTAAGGACCCTGAACTCAGTTAAAATACTTAGAAATGAAAGGGAGACAGGATaGCTACTCATTTTGTGTCTG +
Preference number: 2 (lower is better)
Translates to: LLCPGSLRTLNSVKILRNERETG*LLILCL
Trigger: CAGACACAAAATGAGTAGTCATCCTGTCTCCCTTTC...ATTTCTAAGTATTTTAACTGAGTTCAGGGTCCTTAGTGAGCCTGGACAGAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
3UTR-3UTR TCA 90 bp CATCCTCTAGCAGTTTTATCAAAGCAGGACATAATTGCCTACACTCTGGAAATGGGTGATTGGAAACCCTaGAATCCTGTAGCAAAGTCT +
Preference number: 2 (lower is better)
Translates to: HPLAVLSKQDIIAYTLEMGDWKP*NPVAKS
Trigger: AGACTTTGCTACAGGATTTCAGGGTTTCCAATCACC...CATTTCCAGAGTGTAGGCAATTATGTCCTGCTTTGATAAAACTGCTAGAGGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
3UTR-3UTR GCA 90 bp CAAAAACTACCTGTACTTTGTTTCCTTGAATCGTTATGCTTTTGCATAGCCATCGAGCCTGAGATCCATTaGCCCTGTCACTTGTCTTTC +
Preference number: 2 (lower is better)
Translates to: QKLPVLCFLESLCFCIAIEPEIH*PCHLSF
Trigger: GAAAGACAAGTGACAGGGGCAATGGATCTCAGGCTC...GATGGCTATGCAAAAGCATAACGATTCAAGGAAACAAAGTACAGGTAGTTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
3UTR-3UTR GCA 90 bp GTAGGTGCTCAGAAGGATCAAGAATGGACACTAAATAACACTTCATGCCCAACTTACTCATTTTGTGTCTaGAGGTGTTTCCCACATGTC +
Preference number: 2 (lower is better)
Translates to: VGAQKDQEWTLNNTSCPTYSFCV*RCFPHV
Trigger: GACATGTGGGAAACACCTGCAGACACAAAATGAGTA...AGTTGGGCATGAAGTGTTATTTAGTGTCCATTCTTGATCCTTCTGAGCACCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
3UTR-3UTR GCA 90 bp TCTGGGATCATTTCTGTAACAAACATTAGGCCCTTGGTTAGAAACATAGCTCTCGTTTCCAGCTGTAGGTaGTCAGAAGGATCAAGAATG +
Preference number: 2 (lower is better)
Translates to: SGIISVTNIRPLVRNIALVSSCR*SEGSRM
Trigger: CATTCTTGATCCTTCTGAGCACCTACAGCTGGAAAC...GAGAGCTATGTTTCTAACCAAGGGCCTAATGTTTGTTACAGAAATGATCCCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
3UTR-3UTR GCA 90 bp GAGAGCCTTCAGTTTCAACTCGGAACTTTTAAAGGTCATGATTCAGCTGATCCTCAATCTCAGTCAGAATaGAGGACCAGTATCTGCTTA +
Preference number: 2 (lower is better)
Translates to: ESLQFQLGTFKGHDSADPQSQSE*RTSICL
Trigger: TAAGCAGATACTGGTCCTGCATTCTGACTGAGATTG...AGGATCAGCTGAATCATGACCTTTAAAAGTTCCGAGTTGAAACTGAAGGCTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
3UTR-3UTR GCA 90 bp TCTGGGATCATTTCTGTAACAAACATTAGGCCCTTGGTTAGAAACATAGCTCTCTTGCCTGAGACTCTTTaGAAGTCACATGGGGAAGAA +
Preference number: 2 (lower is better)
Translates to: SGIISVTNIRPLVRNIALLPETL*KSHGEE
Trigger: TTCTTCCCCATGTGACTTGCAAAGAGTCTCAGGCAA...GAGAGCTATGTTTCTAACCAAGGGCCTAATGTTTGTTACAGAAATGATCCCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
3UTR-3UTR TCA 90 bp TTGCTCTGTCCAGGCTCACTAAGGACCCTGAACTCAGTTAAAATACTTAGAAATTTCTGGCCAAGACCTTaGAAACTACACATTCTCTCT +
Preference number: 2 (lower is better)
Translates to: LLCPGSLRTLNSVKILRNFWPRP*KLHILS
Trigger: AGAGAGAATGTGTAGTTTTCAAGGTCTTGGCCAGAA...ATTTCTAAGTATTTTAACTGAGTTCAGGGTCCTTAGTGAGCCTGGACAGAGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
3UTR-3UTR TCA 90 bp CATCTCCACCAAAACCAATATTTTGACTTATGGTGCCTTTGCTGCTGTCAGCTCATTTATCATTCTCATTaGAGCACAGGAGAGAAGTCA +
Preference number: 2 (lower is better)
Translates to: HLHQNQYFDLWCLCCCQLIYHSH*STGEKS
Trigger: TGACTTCTCTCCTGTGCTTCAATGAGAATGATAAAT...GAGCTGACAGCAGCAAAGGCACCATAAGTCAAAATATTGGTTTTGGTGGAGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
3UTR-3UTR TCA 90 bp TTTTTAAGTAATCACATCCAAACAGGTCACACTACCCATGTGTGTTTCTTCATGGCCACCAGTGTCATCTaGTATACTTATCTCAGAGCC +
Preference number: 2 (lower is better)
Translates to: FLSNHIQTGHTTHVCFFMATSVI*YTYLRA
Trigger: GGCTCTGAGATAAGTATATCAGATGACACTGGTGGC...CATGAAGAAACACACATGGGTAGTGTGACCTGTTTGGATGTGATTACTTAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
3UTR-3UTR GCA 90 bp CAAAAACTACCTGTACTTTGTTTCCTTGAATCGTTATGCTTTTGCATAGCCATCCCTCCGGAAGGCAACTaGTTCCTTCTTTTCTTCCTT +
Preference number: 2 (lower is better)
Translates to: QKLPVLCFLESLCFCIAIPPEGN*FLLFFL
Trigger: AAGGAAGAAAAGAAGGAAGCAGTTGCCTTCCGGAGG...GATGGCTATGCAAAAGCATAACGATTCAAGGAAACAAAGTACAGGTAGTTTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
3UTR-3UTR GCA 90 bp TTTTTAAGTAATCACATCCAAACAGGTCACACTACCCATGTGTGTTTCTTCATGGAAGCCCTGGTTTCTTaGCTGAGACTCTTTGCAAGT +
Preference number: 2 (lower is better)
Translates to: FLSNHIQTGHTTHVCFFMEALVS*LRLFAS
Trigger: ACTTGCAAAGAGTCTCAGGCAAGAAACCAGGGCTTC...CATGAAGAAACACACATGGGTAGTGTGACCTGTTTGGATGTGATTACTTAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
3UTR-3UTR CCA 90 bp TTGCTCTGTCCAGGCTCACTAAGGACCCTGAACTCAGTTAAAATACTTAGAAATACGATAAAATCCTGTTaGTGGCAACACTCACTCCAA +
Preference number: 2 (lower is better)
Translates to: LLCPGSLRTLNSVKILRNTIKSC*WQHSLQ
Trigger: TTGGAGTGAGTGTTGCCACCAACAGGATTTTATCGT...ATTTCTAAGTATTTTAACTGAGTTCAGGGTCCTTAGTGAGCCTGGACAGAGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
3UTR CAA 90 bp CAATGTATAAACAGGTCTTCTTTCCTAAAGGTTCTGGCCAAGACCTaGAAAACTACACATTCTCTCTTGGTTTTGACCTGTGTTGACCAT +
Preference number: 2 (lower is better)
Translates to: QCINRSSFLKVLAKT*KTTHSLLVLTCVDH
Trigger: ATGGTCAACACAGGTCAAAACCAAGAGAGAATGTGTAGTTTTCAAGGTCTTGGCCAGAACCTTTAGGAAAGAAGACCTGTTTATACATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
3UTR-3UTR TCA 90 bp CACATGTCTCCAAGGCTCACCCAATTAATCCATTTTGTCAAAATCCTCAGAGGAATTTATCATTCTCATTaGAGCACAGGAGAGAAGTCA +
Preference number: 2 (lower is better)
Translates to: HMSPRLTQLIHFVKILRGIYHSH*STGEKS
Trigger: TGACTTCTCTCCTGTGCTTCAATGAGAATGATAAAT...TCCTCTGAGGATTTTGACAAAATGGATTAATTGGGTGAGCCTTGGAGACATGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
3UTR-3UTR TCA 90 bp GAGAGCCTTCAGTTTCAACTCGGAACTTTTAAAGGTCATGATTCAGCTGATCCTACTTCTTGTATGGTCTaGAAAAAGAAGACTTTGGCA +
Preference number: 2 (lower is better)
Translates to: ESLQFQLGTFKGHDSADPTSCMV*KKKTLA
Trigger: TGCCAAAGTCTTCTTTTTTCAGACCATACAAGAAGT...AGGATCAGCTGAATCATGACCTTTAAAAGTTCCGAGTTGAAACTGAAGGCTCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
3UTR-3UTR TCA 90 bp CAAAAACTACCTGTACTTTGTTTCCTTGAATCGTTATGCTTTTGCATAGCCATCGGTGGGTCAATGGAGTaGCATTTCACTACTGACATA +
Preference number: 2 (lower is better)
Translates to: QKLPVLCFLESLCFCIAIGGSME*HFTTDI
Trigger: TATGTCAGTAGTGAAATGTCACTCCATTGACCCACC...GATGGCTATGCAAAAGCATAACGATTCAAGGAAACAAAGTACAGGTAGTTTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
3UTR-3UTR GCA 90 bp CAAAAACTACCTGTACTTTGTTTCCTTGAATCGTTATGCTTTTGCATAGCCATCAGCAAAGTCTACAACTaGCCCAACTGCACTGACTAT +
Preference number: 2 (lower is better)
Translates to: QKLPVLCFLESLCFCIAISKVYN*PNCTDY
Trigger: ATAGTCAGTGCAGTTGGGGCAGTTGTAGACTTTGCT...GATGGCTATGCAAAAGCATAACGATTCAAGGAAACAAAGTACAGGTAGTTTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
3UTR-3UTR GCA 90 bp CAAAAACTACCTGTACTTTGTTTCCTTGAATCGTTATGCTTTTGCATAGCCATCTTGCCTGAGACTCTTTaGAAGTCACATGGGGAAGAA +
Preference number: 2 (lower is better)
Translates to: QKLPVLCFLESLCFCIAILPETL*KSHGEE
Trigger: TTCTTCCCCATGTGACTTGCAAAGAGTCTCAGGCAA...GATGGCTATGCAAAAGCATAACGATTCAAGGAAACAAAGTACAGGTAGTTTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
3UTR-3UTR TCA 90 bp CAAAAACTACCTGTACTTTGTTTCCTTGAATCGTTATGCTTTTGCATAGCCATCATTCTCTCTTGGTTTTaGCCTGTGTTGACCATCAGT +
Preference number: 2 (lower is better)
Translates to: QKLPVLCFLESLCFCIAIILSWF*PVLTIS
Trigger: ACTGATGGTCAACACAGGTCAAAACCAAGAGAGAAT...GATGGCTATGCAAAAGCATAACGATTCAAGGAAACAAAGTACAGGTAGTTTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
3UTR-3UTR GCA 90 bp TTGCTCTGTCCAGGCTCACTAAGGACCCTGAACTCAGTTAAAATACTTAGAAATCTAAATAACACTTCATaGCCAACTGACACCTTCATT +
Preference number: 2 (lower is better)
Translates to: LLCPGSLRTLNSVKILRNLNNTS*PTDTFI
Trigger: AATGAAGGTGTCAGTTGGGCATGAAGTGTTATTTAG...ATTTCTAAGTATTTTAACTGAGTTCAGGGTCCTTAGTGAGCCTGGACAGAGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
3UTR-3UTR TCA 90 bp TTTTTAAGTAATCACATCCAAACAGGTCACACTACCCATGTGTGTTTCTTCATGCAGAACCTGCTTCTTTaGAAATCAAAACGGCTTCTT +
Preference number: 2 (lower is better)
Translates to: FLSNHIQTGHTTHVCFFMQNLLL*KSKRLL
Trigger: AAGAAGCCGTTTTGATTTTCAAAGAAGCAGGTTCTG...CATGAAGAAACACACATGGGTAGTGTGACCTGTTTGGATGTGATTACTTAAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
3UTR-3UTR GCA 90 bp CAAAAACTACCTGTACTTTGTTTCCTTGAATCGTTATGCTTTTGCATAGCCATCCTAAATAACACTTCATaGCCAACTGACACCTTCATT +
Preference number: 2 (lower is better)
Translates to: QKLPVLCFLESLCFCIAILNNTS*PTDTFI
Trigger: AATGAAGGTGTCAGTTGGGCATGAAGTGTTATTTAG...GATGGCTATGCAAAAGCATAACGATTCAAGGAAACAAAGTACAGGTAGTTTTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
3UTR CCA 72 bp CCTCACAGGCTCTGGCTGTGTGTGGTGATGCAGAGCTaGCTGTGGGGCTTAGGGAGTGGGGAGCCCTCTCCT +
Preference number: 3 (lower is better)
Translates to: PHRLWLCVVMQS*LWGLGSGEPSP
Trigger: AGGAGAGGGCTCCCCACTCCCTAAGCCCCACAGCCAGCTCTGCATCACCACACACAGCCAGAGCCTGTGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
3UTR TCA 72 bp TGCTCCTGGGTTTGTCACCTTCTGGACTTGCAGGCTTaGGACCCTTGGGTCCCCCGTCCTGCACTGGACGAC +
Preference number: 3 (lower is better)
Translates to: CSWVCHLLDLQA*DPWVPRPALDD
Trigger: GTCGTCCAGTGCAGGACGGGGGACCCAAGGGTCTCAAGCCTGCAAGTCCAGAAGGTGACAAACCCAGGAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
3UTR CCA 72 bp AGTCACATGGGGAAGAAGGCAGCTCCTCACAGGCTCTaGCTGTGTGTGGTGATGCAGAGCTGGCTGTGGGGC +
Preference number: 3 (lower is better)
Translates to: SHMGKKAAPHRL*LCVVMQSWLWG
Trigger: GCCCCACAGCCAGCTCTGCATCACCACACACAGCCAGAGCCTGTGAGGAGCTGCCTTCTTCCCCATGTGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
3UTR-3UTR CAA 90 bp TGGACTTGCAGGCTTGAGACCCTTGGGTCCCCCGTCCTGCACTGGACGACCCCTGGGTTAATTGCTGCATaGCCCTGTTATGCTGATTCC +
Preference number: 3 (lower is better)
Translates to: WTCRLETLGSPVLHWTTPGLIAA*PCYADS
Trigger: GGAATCAGCATAACAGGGCAATGCAGCAATTAACCC...AGGGGTCGTCCAGTGCAGGACGGGGGACCCAAGGGTCTCAAGCCTGCAAGTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
3UTR CCA 72 bp AGCTTAACTCCCAGTGCTCCTGGGTTTGTCACCTTCTaGACTTGCAGGCTTGAGACCCTTGGGTCCCCCGTC +
Preference number: 3 (lower is better)
Translates to: SLTPSAPGFVTF*TCRLETLGSPV
Trigger: GACGGGGGACCCAAGGGTCTCAAGCCTGCAAGTCCAGAAGGTGACAAACCCAGGAGCACTGGGAGTTAAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
3UTR-3UTR CAA 90 bp CTTGAGACCCTTGGGTCCCCCGTCCTGCACTGGACGACCCCTGACTGGGAGGAACATTCTCTCTTGGTTTaGACCTGTGTTGACCATCAG +
Preference number: 3 (lower is better)
Translates to: LETLGSPVLHWTTPDWEEHSLLV*TCVDHQ
Trigger: CTGATGGTCAACACAGGTCAAAACCAAGAGAGAATG...TTCCTCCCAGTCAGGGGTCGTCCAGTGCAGGACGGGGGACCCAAGGGTCTCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
3UTR-3UTR CAA 90 bp TGGACTTGCAGGCTTGAGACCCTTGGGTCCCCCGTCCTGCACTGGACGACCCCTCATTCTCTCTTGGTTTaGACCTGTGTTGACCATCAG +
Preference number: 3 (lower is better)
Translates to: WTCRLETLGSPVLHWTTPHSLLV*TCVDHQ
Trigger: CTGATGGTCAACACAGGTCAAAACCAAGAGAGAATG...AGGGGTCGTCCAGTGCAGGACGGGGGACCCAAGGGTCTCAAGCCTGCAAGTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
3UTR-3UTR CAA 90 bp CTTGAGACCCTTGGGTCCCCCGTCCTGCACTGGACGACCCCTGACTGGGAGGAAACTACACATTCTCTCTaGGTTTTGACCTGTGTTGAC +
Preference number: 3 (lower is better)
Translates to: LETLGSPVLHWTTPDWEETTHSL*VLTCVD
Trigger: GTCAACACAGGTCAAAACCAAGAGAGAATGTGTAGT...TTCCTCCCAGTCAGGGGTCGTCCAGTGCAGGACGGGGGACCCAAGGGTCTCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
3UTR GCA 72 bp AGGCTCTTCCCTCCCCAAGGAAAGCTTAACTCCCAGTaGTCCTGGGTTTGTCACCTTCTGGACTTGCAGGCT +
Preference number: 3 (lower is better)
Translates to: RLFPPQGKLNSQ*SWVCHLLDLQA
Trigger: AGCCTGCAAGTCCAGAAGGTGACAAACCCAGGAGCACTGGGAGTTAAGCTTTCCTTGGGGAGGGAAGAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
3UTR CCA 72 bp TTGCTGGGCTTGATCTCCTCAACTGTCTTCAGAGGCTaGAACAAGATGGTCTCCAGAGGCCCCTTTGCTAGG +
Preference number: 3 (lower is better)
Translates to: LLGLISSTVFRG*NKMVSRGPFAR
Trigger: CCTAGCAAAGGGGCCTCTGGAGACCATCTTGTTCCAGCCTCTGAAGACAGTTGAGGAGATCAAGCCCAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
3UTR CCA 72 bp TTCCAAGGTCTTTCGGAGAAGACACGAGACGATGCGTaGGAAAAGGCCAAGAGCAGCAGAATACCTGGCTAC +
Preference number: 3 (lower is better)
Translates to: FQGLSEKTRDDA*EKAKSSRIPGY
Trigger: GTAGCCAGGTATTCTGCTGCTCTTGGCCTTTTCCCACGCATCGTCTCGTGTCTTCTCCGAAAGACCTTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
3UTR GCA 72 bp TATCTTCCAAGGTCTTTCGGAGAAGACACGAGACGATaGGTGGGAAAAGGCCAAGAGCAGCAGAATACCTGG +
Preference number: 3 (lower is better)
Translates to: YLPRSFGEDTRR*VGKGQEQQNTW
Trigger: CCAGGTATTCTGCTGCTCTTGGCCTTTTCCCACGCATCGTCTCGTGTCTTCTCCGAAAGACCTTGGAAGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
3UTR-3UTR CAA 90 bp TCTCAGTCAGAATGCAGGACCAGTATCTGCTTAGTTTCCAGCTGTAGGTGCTCACCACCATTGCTGGGCTaGATCTCCTCAACTGTCTTC +
Preference number: 3 (lower is better)
Translates to: SQSECRTSICLVSSCRCSPPLLG*ISSTVF
Trigger: GAAGACAGTTGAGGAGATCAAGCCCAGCAATGGTGG...TGAGCACCTACAGCTGGAAACTAAGCAGATACTGGTCCTGCATTCTGACTGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
3UTR TCA 72 bp GTCTGTGGAGTAAGATTCTGCCACCATTGCTGGGCTTaGTCTCCTCAACTGTCTTCAGAGGCTGGAACAAGA +
Preference number: 3 (lower is better)
Translates to: VCGVRFCHHCWA*SPQLSSEAGTR
Trigger: TCTTGTTCCAGCCTCTGAAGACAGTTGAGGAGATCAAGCCCAGCAATGGTGGCAGAATCTTACTCCACAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
3UTR GCA 72 bp TTGAAAGGGAGACAGGATGACTACTCATTTTGTGTCTaGAGGTGTTTCCCACATGTCTCCAAGGCTCACCCA +
Preference number: 3 (lower is better)
Translates to: LKGRQDDYSFCV*RCFPHVSKAHP
Trigger: TGGGTGAGCCTTGGAGACATGTGGGAAACACCTGCAGACACAAAATGAGTAGTCATCCTGTCTCCCTTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
3UTR-3UTR CAA 90 bp TCTCAGTCAGAATGCAGGACCAGTATCTGCTTAGTTTCCAGCTGTAGGTGCTCACTGTTCAGATCCCTATaGAAAGGGAGACAGGATGAC +
Preference number: 3 (lower is better)
Translates to: SQSECRTSICLVSSCRCSLFRSL*KGRQDD
Trigger: GTCATCCTGTCTCCCTTTCAATAGGGATCTGAACAG...TGAGCACCTACAGCTGGAAACTAAGCAGATACTGGTCCTGCATTCTGACTGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
3UTR-3UTR CAA 90 bp TCTCAGTCAGAATGCAGGACCAGTATCTGCTTAGTTTCCAGCTGTAGGTGCTCAAACGATAAAATCCTGTaGGTGGCAACACTCACTCCA +
Preference number: 3 (lower is better)
Translates to: SQSECRTSICLVSSCRCSNDKIL*VATLTP
Trigger: TGGAGTGAGTGTTGCCACCAACAGGATTTTATCGTT...TGAGCACCTACAGCTGGAAACTAAGCAGATACTGGTCCTGCATTCTGACTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
3UTR-3UTR CAA 90 bp GTAGGTGCTCAGAAGGATCAAGAATGGACACTAAATAACACTTCATGCCCAACTCCACCATTGCTGGGCTaGATCTCCTCAACTGTCTTC +
Preference number: 3 (lower is better)
Translates to: VGAQKDQEWTLNNTSCPTPPLLG*ISSTVF
Trigger: GAAGACAGTTGAGGAGATCAAGCCCAGCAATGGTGG...AGTTGGGCATGAAGTGTTATTTAGTGTCCATTCTTGATCCTTCTGAGCACCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
3UTR TCA 72 bp CGATGTGGGGTTAATTGCTGCATTGCCCTGTTATGCTaGTTCCCACATCTTGTAGGTCTCTGGGATCATTTC +
Preference number: 3 (lower is better)
Translates to: RCGVNCCIALLC*FPHLVGLWDHF
Trigger: GAAATGATCCCAGAGACCTACAAGATGTGGGAATCAGCATAACAGGGCAATGCAGCAATTAACCCCACATCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
3UTR-3UTR CAA 90 bp CTACTCATTTTGTGTCTGCAGGTGTTTCCCACATGTCTCCAAGGCTCACCCAATACTACACATTCTCTCTaGGTTTTGACCTGTGTTGAC +
Preference number: 3 (lower is better)
Translates to: LLILCLQVFPTCLQGSPNTTHSL*VLTCVD
Trigger: GTCAACACAGGTCAAAACCAAGAGAGAATGTGTAGT...ATTGGGTGAGCCTTGGAGACATGTGGGAAACACCTGCAGACACAAAATGAGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
3UTR-3UTR CAA 90 bp TTGCTCTGTCCAGGCTCACTAAGGACCCTGAACTCAGTTAAAATACTTAGAAATCCACCATTGCTGGGCTaGATCTCCTCAACTGTCTTC +
Preference number: 3 (lower is better)
Translates to: LLCPGSLRTLNSVKILRNPPLLG*ISSTVF
Trigger: GAAGACAGTTGAGGAGATCAAGCCCAGCAATGGTGG...ATTTCTAAGTATTTTAACTGAGTTCAGGGTCCTTAGTGAGCCTGGACAGAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
3UTR-3UTR CAA 90 bp TTGCTGCATTGCCCTGTTATGCTGATTCCCACATCTTGTAGGTCTCTGGGATCAATAAAGTGGGAGTGTTaGTACTCTCAGTACCTAGTC +
Preference number: 3 (lower is better)
Translates to: LLHCPVMLIPTSCRSLGSIKWEC*YSQYLV
Trigger: GACTAGGTACTGAGAGTACAAACACTCCCACTTTAT...TGATCCCAGAGACCTACAAGATGTGGGAATCAGCATAACAGGGCAATGCAGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
3UTR TCA 72 bp ACACCTGTTCAGATCCCTATTGAAAGGGAGACAGGATaGCTACTCATTTTGTGTCTGCAGGTGTTTCCCACA +
Preference number: 3 (lower is better)
Translates to: TPVQIPIERETG*LLILCLQVFPT
Trigger: TGTGGGAAACACCTGCAGACACAAAATGAGTAGTCATCCTGTCTCCCTTTCAATAGGGATCTGAACAGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
3UTR-3UTR CAA 90 bp GCTCTCTCTCACACACACACATCGATCATCTCCACCAAAACCAATATTTTGACTCTGTTCAGATCCCTATaGAAAGGGAGACAGGATGAC +
Preference number: 3 (lower is better)
Translates to: ALSHTHTSIISTKTNILTLFRSL*KGRQDD
Trigger: GTCATCCTGTCTCCCTTTCAATAGGGATCTGAACAG...AGTCAAAATATTGGTTTTGGTGGAGATGATCGATGTGTGTGTGTGAGAGAGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
3UTR-3UTR CAA 90 bp CATCCTCTAGCAGTTTTATCAAAGCAGGACATAATTGCCTACACTCTGGAAATGATGGGAACTAGCAGTTaGAAGCCCTGGTTTCTTGCC +
Preference number: 3 (lower is better)
Translates to: HPLAVLSKQDIIAYTLEMMGTSS*KPWFLA
Trigger: GGCAAGAAACCAGGGCTTCAAACTGCTAGTTCCCAT...CATTTCCAGAGTGTAGGCAATTATGTCCTGCTTTGATAAAACTGCTAGAGGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
3UTR CCA 72 bp ACTTTTAAAGGTCATGATTCAGCTGATCCTGTGAAGTaGACTGTACAGTGGGTAGGTCGCTTCGTGTCTTTA +
Preference number: 3 (lower is better)
Translates to: TFKGHDSADPVK*TVQWVGRFVSL
Trigger: TAAAGACACGAAGCGACCTACCCACTGTACAGTCCACTTCACAGGATCAGCTGAATCATGACCTTTAAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
3UTR-3UTR CAA 90 bp GTAGGTGCTCAGAAGGATCAAGAATGGACACTAAATAACACTTCATGCCCAACTCATTCTCTCTTGGTTTaGACCTGTGTTGACCATCAG +
Preference number: 3 (lower is better)
Translates to: VGAQKDQEWTLNNTSCPTHSLLV*TCVDHQ
Trigger: CTGATGGTCAACACAGGTCAAAACCAAGAGAGAATG...AGTTGGGCATGAAGTGTTATTTAGTGTCCATTCTTGATCCTTCTGAGCACCTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
3UTR-3UTR CAA 90 bp GTAGGTGCTCAGAAGGATCAAGAATGGACACTAAATAACACTTCATGCCCAACTAACGATAAAATCCTGTaGGTGGCAACACTCACTCCA +
Preference number: 3 (lower is better)
Translates to: VGAQKDQEWTLNNTSCPTNDKIL*VATLTP
Trigger: TGGAGTGAGTGTTGCCACCAACAGGATTTTATCGTT...AGTTGGGCATGAAGTGTTATTTAGTGTCCATTCTTGATCCTTCTGAGCACCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
3UTR GCA 72 bp TCTATCCTCATAAAGAAGACACAATCTCAGTCAGAATaGAGGACCAGTATCTGCTTAGTTTCCAGCTGTAGG +
Preference number: 3 (lower is better)
Translates to: SILIKKTQSQSE*RTSICLVSSCR
Trigger: CCTACAGCTGGAAACTAAGCAGATACTGGTCCTGCATTCTGACTGAGATTGTGTCTTCTTTATGAGGATAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
3UTR-3UTR CAA 90 bp TTGCTCTGTCCAGGCTCACTAAGGACCCTGAACTCAGTTAAAATACTTAGAAATAACGATAAAATCCTGTaGGTGGCAACACTCACTCCA +
Preference number: 3 (lower is better)
Translates to: LLCPGSLRTLNSVKILRNNDKIL*VATLTP
Trigger: TGGAGTGAGTGTTGCCACCAACAGGATTTTATCGTT...ATTTCTAAGTATTTTAACTGAGTTCAGGGTCCTTAGTGAGCCTGGACAGAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
3UTR-3UTR CAA 90 bp GCTCTCTCTCACACACACACATCGATCATCTCCACCAAAACCAATATTTTGACTCCAGAACCTGCTTCTTaGAAAATCAAAACGGCTTCT +
Preference number: 3 (lower is better)
Translates to: ALSHTHTSIISTKTNILTPEPAS*KIKTAS
Trigger: AGAAGCCGTTTTGATTTTCAAAGAAGCAGGTTCTGG...AGTCAAAATATTGGTTTTGGTGGAGATGATCGATGTGTGTGTGTGAGAGAGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
3UTR TCA 72 bp GCTGTCAGCTCAAAAACTACCTGTACTTTGTTTCCTTaGATCGTTATGCTTTTGCATAGCCATCCTCTAGCA +
Preference number: 3 (lower is better)
Translates to: AVSSKTTCTLFP*IVMLLHSHPLA
Trigger: TGCTAGAGGATGGCTATGCAAAAGCATAACGATTCAAGGAAACAAAGTACAGGTAGTTTTTGAGCTGACAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
3UTR-3UTR CAA 90 bp TCTGGGATCATTTCTGTAACAAACATTAGGCCCTTGGTTAGAAACATAGCTCTCGGCCTGACTGCCAATTaGATCTATCCTCATAAAGAA +
Preference number: 3 (lower is better)
Translates to: SGIISVTNIRPLVRNIALGLTAN*IYPHKE
Trigger: TTCTTTATGAGGATAGATCAAATTGGCAGTCAGGCC...GAGAGCTATGTTTCTAACCAAGGGCCTAATGTTTGTTACAGAAATGATCCCAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
3UTR-3UTR CAA 90 bp GACGCCTTCATTATAAAGTGGGAGTGTTTGTACTCTCAGTACCTAGTCACTTCTGTCACTTGTCTTTCTTaGGGTATTGAAATGACTAGT +
Preference number: 3 (lower is better)
Translates to: DAFIIKWECLYSQYLVTSVTCLS*GIEMTS
Trigger: ACTAGTCATTTCAATACCCAAAGAAAGACAAGTGAC...AGAAGTGACTAGGTACTGAGAGTACAAACACTCCCACTTTATAATGAAGGCGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
3UTR-3UTR CAA 90 bp ATTCCATTTTTAAGTAATCACATCCAAACAGGTCACACTACCCATGTGTGTTTCAATCTGGTGTGGTTCTaGACACTTGGGCCTACAATT +
Preference number: 3 (lower is better)
Translates to: IPFLSNHIQTGHTTHVCFNLVWF*TLGPTI
Trigger: AATTGTAGGCCCAAGTGTCAAGAACCACACCAGATT...GAAACACACATGGGTAGTGTGACCTGTTTGGATGTGATTACTTAAAAATGGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
3UTR-3UTR CAA 90 bp CATCCTCTAGCAGTTTTATCAAAGCAGGACATAATTGCCTACACTCTGGAAATGGTCACTTGTCTTTCTTaGGGTATTGAAATGACTAGT +
Preference number: 3 (lower is better)
Translates to: HPLAVLSKQDIIAYTLEMVTCLS*GIEMTS
Trigger: ACTAGTCATTTCAATACCCAAAGAAAGACAAGTGAC...CATTTCCAGAGTGTAGGCAATTATGTCCTGCTTTGATAAAACTGCTAGAGGATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR TCA 90 bp GGCTTGAGACCCTTGGGTCCCCCGTCCTGCACTGGACGACCCCTGACTGGGAGGGAGGGGTGGACCAAATaGCTGGAGGGGAGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: GLRPLGPPSCTGRPLTGREGWTK*LEGSGC
Trigger: GCAGCCGCTCCCCTCCAGTCATTTGGTCCACCCCTC...CCTCCCAGTCAGGGGTCGTCCAGTGCAGGACGGGGGACCCAAGGGTCTCAAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR TCA 90 bp CTTGAGACCCTTGGGTCCCCCGTCCTGCACTGGACGACCCCTGACTGGGAGGAAGAGGGGTGGACCAAATaGCTGGAGGGGAGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: LETLGSPVLHWTTPDWEEEGWTK*LEGSGC
Trigger: GCAGCCGCTCCCCTCCAGTCATTTGGTCCACCCCTC...TTCCTCCCAGTCAGGGGTCGTCCAGTGCAGGACGGGGGACCCAAGGGTCTCAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp GGCTTGAGACCCTTGGGTCCCCCGTCCTGCACTGGACGACCCCTGACTGGGAGGGGTCTATCACCCGGATaGGCTTGCTGGAGTGCTTGT +
Preference number: 4 (lower is better)
Translates to: GLRPLGPPSCTGRPLTGRGLSPG*ACWSAC
Trigger: ACAAGCACTCCAGCAAGCCCATCCGGGTGATAGACC...CCTCCCAGTCAGGGGTCGTCCAGTGCAGGACGGGGGACCCAAGGGTCTCAAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR TCA 90 bp AATAGGACAGAGGGGAGGCTAGATTCTCTCAGAGCCCCCTCCGGAAGGCAACTGGAGGGGTGGACCAAATaGCTGGAGGGGAGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: NRTEGRLDSLRAPSGRQLEGWTK*LEGSGC
Trigger: GCAGCCGCTCCCCTCCAGTCATTTGGTCCACCCCTC...CAGTTGCCTTCCGGAGGGGGCTCTGAGAGAATCTAGCCTCCCCTCTGTCCTATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR TCA 90 bp AATAGGACAGAGGGGAGGCTAGATTCTCTCAGAGCCCCCTCCGGAAGGCAACTGCAGATCAGGGCAGCCTaGGGCCTCGAGGATGGCACC +
Preference number: 4 (lower is better)
Translates to: NRTEGRLDSLRAPSGRQLQIRAA*GLEDGT
Trigger: GGTGCCATCCTCGAGGCCTCAGGCTGCCCTGATCTG...CAGTTGCCTTCCGGAGGGGGCTCTGAGAGAATCTAGCCTCCCCTCTGTCCTATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR TCA 90 bp GGCTTGAGACCCTTGGGTCCCCCGTCCTGCACTGGACGACCCCTGACTGGGAGGATTCAGCTGATCCTGTaGAGTGGACTGTACAGTGGG +
Preference number: 4 (lower is better)
Translates to: GLRPLGPPSCTGRPLTGRIQLIL*SGLYSG
Trigger: CCCACTGTACAGTCCACTTCACAGGATCAGCTGAAT...CCTCCCAGTCAGGGGTCGTCCAGTGCAGGACGGGGGACCCAAGGGTCTCAAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp CTTGAGACCCTTGGGTCCCCCGTCCTGCACTGGACGACCCCTGACTGGGAGGAATGTAGTCATCAGGGCTaGAGTGGGGTCCAAGACCAG +
Preference number: 4 (lower is better)
Translates to: LETLGSPVLHWTTPDWEECSHQG*SGVQDQ
Trigger: CTGGTCTTGGACCCCACTGCAGCCCTGATGACTACA...TTCCTCCCAGTCAGGGGTCGTCCAGTGCAGGACGGGGGACCCAAGGGTCTCAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp GGCTTGAGACCCTTGGGTCCCCCGTCCTGCACTGGACGACCCCTGACTGGGAGGCAAGTGGTCCCTGGGTaGCCCATTGATTTCTCTACT +
Preference number: 4 (lower is better)
Translates to: GLRPLGPPSCTGRPLTGRQVVPG*PIDFST
Trigger: AGTAGAGAAATCAATGGGCCACCCAGGGACCACTTG...CCTCCCAGTCAGGGGTCGTCCAGTGCAGGACGGGGGACCCAAGGGTCTCAAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp GGCTTGAGACCCTTGGGTCCCCCGTCCTGCACTGGACGACCCCTGACTGGGAGGCGGGGAGAACCTGCATaGCAAATTCAAACTAAGCCG +
Preference number: 4 (lower is better)
Translates to: GLRPLGPPSCTGRPLTGRRGEPA*QIQTKP
Trigger: CGGCTTAGTTTGAATTTGCCATGCAGGTTCTCCCCG...CCTCCCAGTCAGGGGTCGTCCAGTGCAGGACGGGGGACCCAAGGGTCTCAAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp CTTGAGACCCTTGGGTCCCCCGTCCTGCACTGGACGACCCCTGACTGGGAGGAAGAGGCTGGAACAAGATaGTCTCCAGAGGCCCCTTTG +
Preference number: 4 (lower is better)
Translates to: LETLGSPVLHWTTPDWEEEAGTR*SPEAPL
Trigger: CAAAGGGGCCTCTGGAGACCATCTTGTTCCAGCCTC...TTCCTCCCAGTCAGGGGTCGTCCAGTGCAGGACGGGGGACCCAAGGGTCTCAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
3UTR CAA 72 bp GGTTTGTCACCTTCTGGACTTGCAGGCTTGAGACCCTaGGGTCCCCCGTCCTGCACTGGACGACCCCTGACT +
Preference number: 4 (lower is better)
Translates to: GLSPSGLAGLRP*GPPSCTGRPLT
Trigger: AGTCAGGGGTCGTCCAGTGCAGGACGGGGGACCCAAGGGTCTCAAGCCTGCAAGTCCAGAAGGTGACAAACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp CCTGTTGGTGGCAACACTCACTCCAATCTTTGCTCCAATAGGACAGAGGGGAGGCGGGGTTGCCGCTCATaGGGCCTCGCCGGAGGACAA +
Preference number: 4 (lower is better)
Translates to: PVGGNTHSNLCSNRTEGRRGCRS*GLAGGQ
Trigger: TTGTCCTCCGGCGAGGCCGCATGAGCGGCAACCCCG...CCTCCCCTCTGTCCTATTGGAGCAAAGATTGGAGTGAGTGTTGCCACCAACAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp GGCTTGAGACCCTTGGGTCCCCCGTCCTGCACTGGACGACCCCTGACTGGGAGGGAGGGAGATTCTTCTTaGAACCAGAGTGCATTCTGG +
Preference number: 4 (lower is better)
Translates to: GLRPLGPPSCTGRPLTGREGDSS*NQSAFW
Trigger: CCAGAATGCACTCTGGTTCCAAGAAGAATCTCCCTC...CCTCCCAGTCAGGGGTCGTCCAGTGCAGGACGGGGGACCCAAGGGTCTCAAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp CCTGTTGGTGGCAACACTCACTCCAATCTTTGCTCCAATAGGACAGAGGGGAGGCCAAGACATCGGGGTTaGCGCTCATGCGGCCTCGCC +
Preference number: 4 (lower is better)
Translates to: PVGGNTHSNLCSNRTEGRPRHRG*RSCGLA
Trigger: GGCGAGGCCGCATGAGCGGCAACCCCGATGTCTTGG...CCTCCCCTCTGTCCTATTGGAGCAAAGATTGGAGTGAGTGTTGCCACCAACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp CTTGAGACCCTTGGGTCCCCCGTCCTGCACTGGACGACCCCTGACTGGGAGGAACACATGCTTCCACACTaGACACTCGCTGAGGTCTAT +
Preference number: 4 (lower is better)
Translates to: LETLGSPVLHWTTPDWEEHMLPH*TLAEVY
Trigger: ATAGACCTCAGCGAGTGTGCAGTGTGGAAGCATGTG...TTCCTCCCAGTCAGGGGTCGTCCAGTGCAGGACGGGGGACCCAAGGGTCTCAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp AATAGGACAGAGGGGAGGCTAGATTCTCTCAGAGCCCCCTCCGGAAGGCAACTGCCTCCTGAGCTCCACTaGCATGGCATGAGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: NRTEGRLDSLRAPSGRQLPPELH*HGMRGG
Trigger: TCCACCCCTCATGCCATGGCAGTGGAGCTCAGGAGG...CAGTTGCCTTCCGGAGGGGGCTCTGAGAGAATCTAGCCTCCCCTCTGTCCTATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp TGGACTTGCAGGCTTGAGACCCTTGGGTCCCCCGTCCTGCACTGGACGACCCCTGGTCCTGGTAAGAGATaGATGTTCCCGGATGATCGA +
Preference number: 4 (lower is better)
Translates to: WTCRLETLGSPVLHWTTPGPGKR*MFPDDR
Trigger: TCGATCATCCGGGAACATGCATCTCTTACCAGGACC...AGGGGTCGTCCAGTGCAGGACGGGGGACCCAAGGGTCTCAAGCCTGCAAGTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp GGCTTGAGACCCTTGGGTCCCCCGTCCTGCACTGGACGACCCCTGACTGGGAGGGACTTATGGTGCCTTTaGTGCTGTCAGCTCAAAAAC +
Preference number: 4 (lower is better)
Translates to: GLRPLGPPSCTGRPLTGRDLWCL*CCQLKN
Trigger: GTTTTTGAGCTGACAGCAGCAAAGGCACCATAAGTC...CCTCCCAGTCAGGGGTCGTCCAGTGCAGGACGGGGGACCCAAGGGTCTCAAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp TGGACTTGCAGGCTTGAGACCCTTGGGTCCCCCGTCCTGCACTGGACGACCCCTAGCTGTCTTCGATACTaGCTGAAGCTGTGGGGTACA +
Preference number: 4 (lower is better)
Translates to: WTCRLETLGSPVLHWTTPSCLRY*LKLWGT
Trigger: TGTACCCCACAGCTTCAGCCAGTATCGAAGACAGCT...AGGGGTCGTCCAGTGCAGGACGGGGGACCCAAGGGTCTCAAGCCTGCAAGTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp CTTGAGACCCTTGGGTCCCCCGTCCTGCACTGGACGACCCCTGACTGGGAGGAAGAGATCTCTATTCACTaGGGGAGGTTCCAGGTTTGC +
Preference number: 4 (lower is better)
Translates to: LETLGSPVLHWTTPDWEEEISIH*GRFQVC
Trigger: GCAAACCTGGAACCTCCCCCAGTGAATAGAGATCTC...TTCCTCCCAGTCAGGGGTCGTCCAGTGCAGGACGGGGGACCCAAGGGTCTCAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp CTTGAGACCCTTGGGTCCCCCGTCCTGCACTGGACGACCCCTGACTGGGAGGAAAAGTGGACTGTACAGTaGGTAGGTCGCTTCGTGTCT +
Preference number: 4 (lower is better)
Translates to: LETLGSPVLHWTTPDWEEKWTVQ*VGRFVS
Trigger: AGACACGAAGCGACCTACCCACTGTACAGTCCACTT...TTCCTCCCAGTCAGGGGTCGTCCAGTGCAGGACGGGGGACCCAAGGGTCTCAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp TGGACTTGCAGGCTTGAGACCCTTGGGTCCCCCGTCCTGCACTGGACGACCCCTTTGTGGGTGCAGAGATaGTATGAACAGGGACTGAGG +
Preference number: 4 (lower is better)
Translates to: WTCRLETLGSPVLHWTTPLWVQR*YEQGLR
Trigger: CCTCAGTCCCTGTTCATACCATCTCTGCACCCACAA...AGGGGTCGTCCAGTGCAGGACGGGGGACCCAAGGGTCTCAAGCCTGCAAGTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR TCA 90 bp AATAGGACAGAGGGGAGGCTAGATTCTCTCAGAGCCCCCTCCGGAAGGCAACTGACACTGCACACTCGCTaGGGTCTATCACCCGGATGG +
Preference number: 4 (lower is better)
Translates to: NRTEGRLDSLRAPSGRQLTLHTR*GLSPGW
Trigger: CCATCCGGGTGATAGACCTCAGCGAGTGTGCAGTGT...CAGTTGCCTTCCGGAGGGGGCTCTGAGAGAATCTAGCCTCCCCTCTGTCCTATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR TCA 90 bp GGCTTGAGACCCTTGGGTCCCCCGTCCTGCACTGGACGACCCCTGACTGGGAGGTTCTGGCCAAGACCTTaGAAACTACACATTCTCTCT +
Preference number: 4 (lower is better)
Translates to: GLRPLGPPSCTGRPLTGRFWPRP*KLHILS
Trigger: AGAGAGAATGTGTAGTTTTCAAGGTCTTGGCCAGAA...CCTCCCAGTCAGGGGTCGTCCAGTGCAGGACGGGGGACCCAAGGGTCTCAAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp GGCTTGAGACCCTTGGGTCCCCCGTCCTGCACTGGACGACCCCTGACTGGGAGGTATCATGGGCCTGACTaGCAATTTGATCTATCCTCA +
Preference number: 4 (lower is better)
Translates to: GLRPLGPPSCTGRPLTGRYHGPD*QFDLSS
Trigger: TGAGGATAGATCAAATTGGCAGTCAGGCCCATGATA...CCTCCCAGTCAGGGGTCGTCCAGTGCAGGACGGGGGACCCAAGGGTCTCAAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp CTTGAGACCCTTGGGTCCCCCGTCCTGCACTGGACGACCCCTGACTGGGAGGAAAAGCTTAACTCCCAGTaGTCCTGGGTTTGTCACCTT +
Preference number: 4 (lower is better)
Translates to: LETLGSPVLHWTTPDWEEKLNSQ*SWVCHL
Trigger: AAGGTGACAAACCCAGGAGCACTGGGAGTTAAGCTT...TTCCTCCCAGTCAGGGGTCGTCCAGTGCAGGACGGGGGACCCAAGGGTCTCAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp CCTGTTGGTGGCAACACTCACTCCAATCTTTGCTCCAATAGGACAGAGGGGAGGGGTGGACCAAATGACTaGAGGGGAGCGGCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: PVGGNTHSNLCSNRTEGRGGPND*RGAAAG
Trigger: GCCTGCAGCCGCTCCCCTCCAGTCATTTGGTCCACC...CCTCCCCTCTGTCCTATTGGAGCAAAGATTGGAGTGAGTGTTGCCACCAACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp AATAGGACAGAGGGGAGGCTAGATTCTCTCAGAGCCCCCTCCGGAAGGCAACTGTCATCAGGGCTGCAGTaGGGTCCAAGACCAGAGGCA +
Preference number: 4 (lower is better)
Translates to: NRTEGRLDSLRAPSGRQLSSGLQ*GPRPEA
Trigger: TGCCTCTGGTCTTGGACCCCACTGCAGCCCTGATGA...CAGTTGCCTTCCGGAGGGGGCTCTGAGAGAATCTAGCCTCCCCTCTGTCCTATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp AATAGGACAGAGGGGAGGCTAGATTCTCTCAGAGCCCCCTCCGGAAGGCAACTGGTGGTGATGCAGAGCTaGCTGTGGGGCTTAGGGAGT +
Preference number: 4 (lower is better)
Translates to: NRTEGRLDSLRAPSGRQLVVMQS*LWGLGS
Trigger: ACTCCCTAAGCCCCACAGCCAGCTCTGCATCACCAC...CAGTTGCCTTCCGGAGGGGGCTCTGAGAGAATCTAGCCTCCCCTCTGTCCTATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR TCA 90 bp GGCTTGAGACCCTTGGGTCCCCCGTCCTGCACTGGACGACCCCTGACTGGGAGGTACTCTTTGTTCTTCTaGAAGGAGAAGTTTCTGCTG +
Preference number: 4 (lower is better)
Translates to: GLRPLGPPSCTGRPLTGRYSLFF*KEKFLL
Trigger: CAGCAGAAACTTCTCCTTTCAGAAGAACAAAGAGTA...CCTCCCAGTCAGGGGTCGTCCAGTGCAGGACGGGGGACCCAAGGGTCTCAAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp CTACTCATTTTGTGTCTGCAGGTGTTTCCCACATGTCTCCAAGGCTCACCCAATCGGGGTTGCCGCTCATaGGGCCTCGCCGGAGGACAA +
Preference number: 4 (lower is better)
Translates to: LLILCLQVFPTCLQGSPNRGCRS*GLAGGQ
Trigger: TTGTCCTCCGGCGAGGCCGCATGAGCGGCAACCCCG...ATTGGGTGAGCCTTGGAGACATGTGGGAAACACCTGCAGACACAAAATGAGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp AATAGGACAGAGGGGAGGCTAGATTCTCTCAGAGCCCCCTCCGGAAGGCAACTGTGTAGTCATCAGGGCTaGAGTGGGGTCCAAGACCAG +
Preference number: 4 (lower is better)
Translates to: NRTEGRLDSLRAPSGRQLCSHQG*SGVQDQ
Trigger: CTGGTCTTGGACCCCACTGCAGCCCTGATGACTACA...CAGTTGCCTTCCGGAGGGGGCTCTGAGAGAATCTAGCCTCCCCTCTGTCCTATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp CCTGTTGGTGGCAACACTCACTCCAATCTTTGCTCCAATAGGACAGAGGGGAGGGGGAGGTTCCAGGTTTaGAGGCAGCTCAGGCAACGG +
Preference number: 4 (lower is better)
Translates to: PVGGNTHSNLCSNRTEGRGRFQV*RQLRQR
Trigger: CCGTTGCCTGAGCTGCCTGCAAACCTGGAACCTCCC...CCTCCCCTCTGTCCTATTGGAGCAAAGATTGGAGTGAGTGTTGCCACCAACAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp TGGACTTGCAGGCTTGAGACCCTTGGGTCCCCCGTCCTGCACTGGACGACCCCTTTGCCTGAGACTCTTTaGAAGTCACATGGGGAAGAA +
Preference number: 4 (lower is better)
Translates to: WTCRLETLGSPVLHWTTPLPETL*KSHGEE
Trigger: TTCTTCCCCATGTGACTTGCAAAGAGTCTCAGGCAA...AGGGGTCGTCCAGTGCAGGACGGGGGACCCAAGGGTCTCAAGCCTGCAAGTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp AATAGGACAGAGGGGAGGCTAGATTCTCTCAGAGCCCCCTCCGGAAGGCAACTGGGTCTATCACCCGGATaGGCTTGCTGGAGTGCTTGT +
Preference number: 4 (lower is better)
Translates to: NRTEGRLDSLRAPSGRQLGLSPG*ACWSAC
Trigger: ACAAGCACTCCAGCAAGCCCATCCGGGTGATAGACC...CAGTTGCCTTCCGGAGGGGGCTCTGAGAGAATCTAGCCTCCCCTCTGTCCTATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp TGGACTTGCAGGCTTGAGACCCTTGGGTCCCCCGTCCTGCACTGGACGACCCCTCGGTGTCTTAAGGATTaGCCTTCTACATCAGCTTTC +
Preference number: 4 (lower is better)
Translates to: WTCRLETLGSPVLHWTTPRCLKD*PSTSAF
Trigger: GAAAGCTGATGTAGAAGGCCAATCCTTAAGACACCG...AGGGGTCGTCCAGTGCAGGACGGGGGACCCAAGGGTCTCAAGCCTGCAAGTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp GGCTTGAGACCCTTGGGTCCCCCGTCCTGCACTGGACGACCCCTGACTGGGAGGGCCTTCATTATAAAGTaGGAGTGTTTGTACTCTCAG +
Preference number: 4 (lower is better)
Translates to: GLRPLGPPSCTGRPLTGRAFIIK*ECLYSQ
Trigger: CTGAGAGTACAAACACTCCCACTTTATAATGAAGGC...CCTCCCAGTCAGGGGTCGTCCAGTGCAGGACGGGGGACCCAAGGGTCTCAAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR TCA 90 bp TCTCAGTCAGAATGCAGGACCAGTATCTGCTTAGTTTCCAGCTGTAGGTGCTCACAGATCAGGGCAGCCTaGGGCCTCGAGGATGGCACC +
Preference number: 4 (lower is better)
Translates to: SQSECRTSICLVSSCRCSQIRAA*GLEDGT
Trigger: GGTGCCATCCTCGAGGCCTCAGGCTGCCCTGATCTG...TGAGCACCTACAGCTGGAAACTAAGCAGATACTGGTCCTGCATTCTGACTGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp CCTGTTGGTGGCAACACTCACTCCAATCTTTGCTCCAATAGGACAGAGGGGAGGAAGCTGGGGCCCACATaGTTCCACACTGCACACTCG +
Preference number: 4 (lower is better)
Translates to: PVGGNTHSNLCSNRTEGRKLGPT*FHTAHS
Trigger: CGAGTGTGCAGTGTGGAAGCATGTGGGCCCCAGCTT...CCTCCCCTCTGTCCTATTGGAGCAAAGATTGGAGTGAGTGTTGCCACCAACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp AATAGGACAGAGGGGAGGCTAGATTCTCTCAGAGCCCCCTCCGGAAGGCAACTGAGGAGAAGTTTCTGCTaGATGGGGGCTGGTGATGCT +
Preference number: 4 (lower is better)
Translates to: NRTEGRLDSLRAPSGRQLRRSFC*MGAGDA
Trigger: AGCATCACCAGCCCCCATGCAGCAGAAACTTCTCCT...CAGTTGCCTTCCGGAGGGGGCTCTGAGAGAATCTAGCCTCCCCTCTGTCCTATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp AATAGGACAGAGGGGAGGCTAGATTCTCTCAGAGCCCCCTCCGGAAGGCAACTGGCTCTGACTCACTTCTaGTTTCCTCAGTGGCTACGG +
Preference number: 4 (lower is better)
Translates to: NRTEGRLDSLRAPSGRQLALTHF*FPQWLR
Trigger: CCGTAGCCACTGAGGAAACCAGAAGTGAGTCAGAGC...CAGTTGCCTTCCGGAGGGGGCTCTGAGAGAATCTAGCCTCCCCTCTGTCCTATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR TCA 90 bp AATAGGACAGAGGGGAGGCTAGATTCTCTCAGAGCCCCCTCCGGAAGGCAACTGTGGGAACTAGCAGTTTaGAGCCCTGGTTTCTTGCCT +
Preference number: 4 (lower is better)
Translates to: NRTEGRLDSLRAPSGRQLWELAV*SPGFLP
Trigger: AGGCAAGAAACCAGGGCTTCAAACTGCTAGTTCCCA...CAGTTGCCTTCCGGAGGGGGCTCTGAGAGAATCTAGCCTCCCCTCTGTCCTATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp AATAGGACAGAGGGGAGGCTAGATTCTCTCAGAGCCCCCTCCGGAAGGCAACTGCACATGCTTCCACACTaGACACTCGCTGAGGTCTAT +
Preference number: 4 (lower is better)
Translates to: NRTEGRLDSLRAPSGRQLHMLPH*TLAEVY
Trigger: ATAGACCTCAGCGAGTGTGCAGTGTGGAAGCATGTG...CAGTTGCCTTCCGGAGGGGGCTCTGAGAGAATCTAGCCTCCCCTCTGTCCTATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp AATAGGACAGAGGGGAGGCTAGATTCTCTCAGAGCCCCCTCCGGAAGGCAACTGGAGCCTGAGATCCATTaGCCCTGTCACTTGTCTTTC +
Preference number: 4 (lower is better)
Translates to: NRTEGRLDSLRAPSGRQLEPEIH*PCHLSF
Trigger: GAAAGACAAGTGACAGGGGCAATGGATCTCAGGCTC...CAGTTGCCTTCCGGAGGGGGCTCTGAGAGAATCTAGCCTCCCCTCTGTCCTATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp CTTGAGACCCTTGGGTCCCCCGTCCTGCACTGGACGACCCCTGACTGGGAGGAAAAAGCAGGACATAATTaGCTACACTCTGGAAATGAG +
Preference number: 4 (lower is better)
Translates to: LETLGSPVLHWTTPDWEEKAGHN*LHSGNE
Trigger: CTCATTTCCAGAGTGTAGGCAATTATGTCCTGCTTT...TTCCTCCCAGTCAGGGGTCGTCCAGTGCAGGACGGGGGACCCAAGGGTCTCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp TCTCAGTCAGAATGCAGGACCAGTATCTGCTTAGTTTCCAGCTGTAGGTGCTCATTGGGTCCCCCGTCCTaGACTGGACGACCCCTGACT +
Preference number: 4 (lower is better)
Translates to: SQSECRTSICLVSSCRCSLGPPS*TGRPLT
Trigger: AGTCAGGGGTCGTCCAGTGCAGGACGGGGGACCCAA...TGAGCACCTACAGCTGGAAACTAAGCAGATACTGGTCCTGCATTCTGACTGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp CCTGTTGGTGGCAACACTCACTCCAATCTTTGCTCCAATAGGACAGAGGGGAGGCCCGGATGGGCTTGCTaGAGTGCTTGTTCCTGTAGT +
Preference number: 4 (lower is better)
Translates to: PVGGNTHSNLCSNRTEGRPGWAC*SACSCS
Trigger: ACTACAGGAACAAGCACTCCAGCAAGCCCATCCGGG...CCTCCCCTCTGTCCTATTGGAGCAAAGATTGGAGTGAGTGTTGCCACCAACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp AATAGGACAGAGGGGAGGCTAGATTCTCTCAGAGCCCCCTCCGGAAGGCAACTGCAAGTGGTCCCTGGGTaGCCCATTGATTTCTCTACT +
Preference number: 4 (lower is better)
Translates to: NRTEGRLDSLRAPSGRQLQVVPG*PIDFST
Trigger: AGTAGAGAAATCAATGGGCCACCCAGGGACCACTTG...CAGTTGCCTTCCGGAGGGGGCTCTGAGAGAATCTAGCCTCCCCTCTGTCCTATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp CTACTGATGGGAGAGTTCCAGTTGAACATCGCAGAAAGAAACCCTCACTTGACATCCCCCGTCCTGCACTaGACGACCCCTGACTGGGAG +
Preference number: 4 (lower is better)
Translates to: LLMGEFQLNIAERNPHLTSPVLH*TTPDWE
Trigger: CTCCCAGTCAGGGGTCGTCCAGTGCAGGACGGGGGA...TGTCAAGTGAGGGTTTCTTTCTGCGATGTTCAACTGGAACTCTCCCATCAGTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR TCA 90 bp CTTGAGACCCTTGGGTCCCCCGTCCTGCACTGGACGACCCCTGACTGGGAGGAAACTTCTTGTATGGTCTaGAAAAAGAAGACTTTGGCA +
Preference number: 4 (lower is better)
Translates to: LETLGSPVLHWTTPDWEETSCMV*KKKTLA
Trigger: TGCCAAAGTCTTCTTTTTTCAGACCATACAAGAAGT...TTCCTCCCAGTCAGGGGTCGTCCAGTGCAGGACGGGGGACCCAAGGGTCTCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp TTGCTGCATTGCCCTGTTATGCTGATTCCCACATCTTGTAGGTCTCTGGGATCAGGACAAACCAGCGCTTaGGCCAGGCGTAGCGCTGTA +
Preference number: 4 (lower is better)
Translates to: LLHCPVMLIPTSCRSLGSGQTSA*ARRSAV
Trigger: TACAGCGCTACGCCTGGCGCAAGCGCTGGTTTGTCC...TGATCCCAGAGACCTACAAGATGTGGGAATCAGCATAACAGGGCAATGCAGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp CACATGTCTCCAAGGCTCACCCAATTAATCCATTTTGTCAAAATCCTCAGAGGACGGGGTTGCCGCTCATaGGGCCTCGCCGGAGGACAA +
Preference number: 4 (lower is better)
Translates to: HMSPRLTQLIHFVKILRGRGCRS*GLAGGQ
Trigger: TTGTCCTCCGGCGAGGCCGCATGAGCGGCAACCCCG...TCCTCTGAGGATTTTGACAAAATGGATTAATTGGGTGAGCCTTGGAGACATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp TACTCTCAGTACCTAGTCACTTCTAAAGCAGAAGGGAGCAATTGGCTGGGAAACGTGGGGCTTAGGGAGTaGGGAGCCCTCTCCTTGCTC +
Preference number: 4 (lower is better)
Translates to: YSQYLVTSKAEGSNWLGNVGLRE*GALSLL
Trigger: GAGCAAGGAGAGGGCTCCCCACTCCCTAAGCCCCAC...GTTTCCCAGCCAATTGCTCCCTTCTGCTTTAGAAGTGACTAGGTACTGAGAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR TCA 90 bp CCTGTTGGTGGCAACACTCACTCCAATCTTTGCTCCAATAGGACAGAGGGGAGGATGCATGTTCCCGGATaGTCGAGAGGTTTCTCAGGT +
Preference number: 4 (lower is better)
Translates to: PVGGNTHSNLCSNRTEGRMHVPG*SRGFSG
Trigger: ACCTGAGAAACCTCTCGATCATCCGGGAACATGCAT...CCTCCCCTCTGTCCTATTGGAGCAAAGATTGGAGTGAGTGTTGCCACCAACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR TCA 90 bp CCTGTTGGTGGCAACACTCACTCCAATCTTTGCTCCAATAGGACAGAGGGGAGGCACTTCATGCCCAACTaGCACCTTCATTCTGGGTCT +
Preference number: 4 (lower is better)
Translates to: PVGGNTHSNLCSNRTEGRHFMPN*HLHSGS
Trigger: AGACCCAGAATGAAGGTGTCAGTTGGGCATGAAGTG...CCTCCCCTCTGTCCTATTGGAGCAAAGATTGGAGTGAGTGTTGCCACCAACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp GGTGTTTCCCACATGTCTCCAAGGCTCACCCAATTAATCCATTTTGTCAAAATCCCAGCCGGTGCACACTaGGTCGCCCGCACTCATCGT +
Preference number: 4 (lower is better)
Translates to: GVSHMSPRLTQLIHFVKIPAGAH*VARTHR
Trigger: ACGATGAGTGCGGGCGACGCAGTGTGCACCGGCTGG...GATTTTGACAAAATGGATTAATTGGGTGAGCCTTGGAGACATGTGGGAAACACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp GAGAGCCTTCAGTTTCAACTCGGAACTTTTAAAGGTCATGATTCAGCTGATCCTCCAAGACATCGGGGTTaGCGCTCATGCGGCCTCGCC +
Preference number: 4 (lower is better)
Translates to: ESLQFQLGTFKGHDSADPPRHRG*RSCGLA
Trigger: GGCGAGGCCGCATGAGCGGCAACCCCGATGTCTTGG...AGGATCAGCTGAATCATGACCTTTAAAAGTTCCGAGTTGAAACTGAAGGCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp TTGCTGCATTGCCCTGTTATGCTGATTCCCACATCTTGTAGGTCTCTGGGATCAAAGCTGGGGCCCACATaGTTCCACACTGCACACTCG +
Preference number: 4 (lower is better)
Translates to: LLHCPVMLIPTSCRSLGSKLGPT*FHTAHS
Trigger: CGAGTGTGCAGTGTGGAAGCATGTGGGCCCCAGCTT...TGATCCCAGAGACCTACAAGATGTGGGAATCAGCATAACAGGGCAATGCAGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp CCTGTTGGTGGCAACACTCACTCCAATCTTTGCTCCAATAGGACAGAGGGGAGGCACACCTGCATTTCTTaGTCAGTTTTGGCCACCAGG +
Preference number: 4 (lower is better)
Translates to: PVGGNTHSNLCSNRTEGRHTCIS*SVLATR
Trigger: CCTGGTGGCCAAAACTGAGCAAGAAATGCAGGTGTG...CCTCCCCTCTGTCCTATTGGAGCAAAGATTGGAGTGAGTGTTGCCACCAACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp CCTGTTGGTGGCAACACTCACTCCAATCTTTGCTCCAATAGGACAGAGGGGAGGTCCACTCCTGTTTTGTaGTCTGGAGAGCCTGTGTCT +
Preference number: 4 (lower is better)
Translates to: PVGGNTHSNLCSNRTEGRSTPVL*SGEPVS
Trigger: AGACACAGGCTCTCCAGAGCACAAAACAGGAGTGGA...CCTCCCCTCTGTCCTATTGGAGCAAAGATTGGAGTGAGTGTTGCCACCAACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp CCTGTTGGTGGCAACACTCACTCCAATCTTTGCTCCAATAGGACAGAGGGGAGGATCTGGTGGGTAGACTaGTATGGTGCAGTCTTCCAG +
Preference number: 4 (lower is better)
Translates to: PVGGNTHSNLCSNRTEGRIWWVD*YGAVFQ
Trigger: CTGGAAGACTGCACCATACCAGTCTACCCACCAGAT...CCTCCCCTCTGTCCTATTGGAGCAAAGATTGGAGTGAGTGTTGCCACCAACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp CCTGTTGGTGGCAACACTCACTCCAATCTTTGCTCCAATAGGACAGAGGGGAGGGAGATCTCTATTCACTaGGGGAGGTTCCAGGTTTGC +
Preference number: 4 (lower is better)
Translates to: PVGGNTHSNLCSNRTEGREISIH*GRFQVC
Trigger: GCAAACCTGGAACCTCCCCCAGTGAATAGAGATCTC...CCTCCCCTCTGTCCTATTGGAGCAAAGATTGGAGTGAGTGTTGCCACCAACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp TTGCTGCATTGCCCTGTTATGCTGATTCCCACATCTTGTAGGTCTCTGGGATCAGTGGTGATGCAGAGCTaGCTGTGGGGCTTAGGGAGT +
Preference number: 4 (lower is better)
Translates to: LLHCPVMLIPTSCRSLGSVVMQS*LWGLGS
Trigger: ACTCCCTAAGCCCCACAGCCAGCTCTGCATCACCAC...TGATCCCAGAGACCTACAAGATGTGGGAATCAGCATAACAGGGCAATGCAGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp TCTCAGTCAGAATGCAGGACCAGTATCTGCTTAGTTTCCAGCTGTAGGTGCTCAGCTCCTCACAGGCTCTaGCTGTGTGTGGTGATGCAG +
Preference number: 4 (lower is better)
Translates to: SQSECRTSICLVSSCRCSAPHRL*LCVVMQ
Trigger: CTGCATCACCACACACAGCCAGAGCCTGTGAGGAGC...TGAGCACCTACAGCTGGAAACTAAGCAGATACTGGTCCTGCATTCTGACTGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp CCTGTTGGTGGCAACACTCACTCCAATCTTTGCTCCAATAGGACAGAGGGGAGGTGGACGACCCCTGACTaGGAGGAATTTTCTAACGAG +
Preference number: 4 (lower is better)
Translates to: PVGGNTHSNLCSNRTEGRWTTPD*EEFSNE
Trigger: CTCGTTAGAAAATTCCTCCCAGTCAGGGGTCGTCCA...CCTCCCCTCTGTCCTATTGGAGCAAAGATTGGAGTGAGTGTTGCCACCAACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp AACGATAAAATCCTGTTGGTGGCAACACTCACTCCAATCTTTGCTCCAATAGGATCCCCCGTCCTGCACTaGACGACCCCTGACTGGGAG +
Preference number: 4 (lower is better)
Translates to: NDKILLVATLTPIFAPIGSPVLH*TTPDWE
Trigger: CTCCCAGTCAGGGGTCGTCCAGTGCAGGACGGGGGA...TCCTATTGGAGCAAAGATTGGAGTGAGTGTTGCCACCAACAGGATTTTATCGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR TCA 90 bp TACTCTCAGTACCTAGTCACTTCTAAAGCAGAAGGGAGCAATTGGCTGGGAAACGGTTGCAGACCTGACTaGTGCTGTGCACCCACACCT +
Preference number: 4 (lower is better)
Translates to: YSQYLVTSKAEGSNWLGNGCRPD*CCAPTP
Trigger: AGGTGTGGGTGCACAGCATCAGTCAGGTCTGCAACC...GTTTCCCAGCCAATTGCTCCCTTCTGCTTTAGAAGTGACTAGGTACTGAGAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR TCA 90 bp TTGCTCTGTCCAGGCTCACTAAGGACCCTGAACTCAGTTAAAATACTTAGAAATCAGATCAGGGCAGCCTaGGGCCTCGAGGATGGCACC +
Preference number: 4 (lower is better)
Translates to: LLCPGSLRTLNSVKILRNQIRAA*GLEDGT
Trigger: GGTGCCATCCTCGAGGCCTCAGGCTGCCCTGATCTG...ATTTCTAAGTATTTTAACTGAGTTCAGGGTCCTTAGTGAGCCTGGACAGAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR TCA 90 bp AATAGGACAGAGGGGAGGCTAGATTCTCTCAGAGCCCCCTCCGGAAGGCAACTGATTCTCTCTTGGTTTTaGCCTGTGTTGACCATCAGT +
Preference number: 4 (lower is better)
Translates to: NRTEGRLDSLRAPSGRQLILSWF*PVLTIS
Trigger: ACTGATGGTCAACACAGGTCAAAACCAAGAGAGAAT...CAGTTGCCTTCCGGAGGGGGCTCTGAGAGAATCTAGCCTCCCCTCTGTCCTATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR TCA 90 bp GCTCTCTCTCACACACACACATCGATCATCTCCACCAAAACCAATATTTTGACTCTGGACTTGCAGGCTTaGGACCCTTGGGTCCCCCGT +
Preference number: 4 (lower is better)
Translates to: ALSHTHTSIISTKTNILTLDLQA*DPWVPR
Trigger: ACGGGGGACCCAAGGGTCTCAAGCCTGCAAGTCCAG...AGTCAAAATATTGGTTTTGGTGGAGATGATCGATGTGTGTGTGTGAGAGAGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp TCTGGGATCATTTCTGTAACAAACATTAGGCCCTTGGTTAGAAACATAGCTCTCCCAGCCGGTGCACACTaGGTCGCCCGCACTCATCGT +
Preference number: 4 (lower is better)
Translates to: SGIISVTNIRPLVRNIALPAGAH*VARTHR
Trigger: ACGATGAGTGCGGGCGACGCAGTGTGCACCGGCTGG...GAGAGCTATGTTTCTAACCAAGGGCCTAATGTTTGTTACAGAAATGATCCCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp TTGCTCTGTCCAGGCTCACTAAGGACCCTGAACTCAGTTAAAATACTTAGAAATCCAAGACATCGGGGTTaGCGCTCATGCGGCCTCGCC +
Preference number: 4 (lower is better)
Translates to: LLCPGSLRTLNSVKILRNPRHRG*RSCGLA
Trigger: GGCGAGGCCGCATGAGCGGCAACCCCGATGTCTTGG...ATTTCTAAGTATTTTAACTGAGTTCAGGGTCCTTAGTGAGCCTGGACAGAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp CTACTCATTTTGTGTCTGCAGGTGTTTCCCACATGTCTCCAAGGCTCACCCAATTCACCCGGATGGGCTTaGTGGAGTGCTTGTTCCTGT +
Preference number: 4 (lower is better)
Translates to: LLILCLQVFPTCLQGSPNSPGWA*WSACSC
Trigger: ACAGGAACAAGCACTCCAGCAAGCCCATCCGGGTGA...ATTGGGTGAGCCTTGGAGACATGTGGGAAACACCTGCAGACACAAAATGAGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp TCTCAGTCAGAATGCAGGACCAGTATCTGCTTAGTTTCCAGCTGTAGGTGCTCACTGGAGGGGAGCGGCTaGAGGCAGTCAACAAAAACA +
Preference number: 4 (lower is better)
Translates to: SQSECRTSICLVSSCRCSLEGSG*RQSTKT
Trigger: TGTTTTTGTTGACTGCCTGCAGCCGCTCCCCTCCAG...TGAGCACCTACAGCTGGAAACTAAGCAGATACTGGTCCTGCATTCTGACTGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp AATAGGACAGAGGGGAGGCTAGATTCTCTCAGAGCCCCCTCCGGAAGGCAACTGTATCATGGGCCTGACTaGCAATTTGATCTATCCTCA +
Preference number: 4 (lower is better)
Translates to: NRTEGRLDSLRAPSGRQLYHGPD*QFDLSS
Trigger: TGAGGATAGATCAAATTGGCAGTCAGGCCCATGATA...CAGTTGCCTTCCGGAGGGGGCTCTGAGAGAATCTAGCCTCCCCTCTGTCCTATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp CCTGTTGGTGGCAACACTCACTCCAATCTTTGCTCCAATAGGACAGAGGGGAGGACCAGCTATCACATCTaGTGGGTAGACTGGTATGGT +
Preference number: 4 (lower is better)
Translates to: PVGGNTHSNLCSNRTEGRTSYHI*WVDWYG
Trigger: ACCATACCAGTCTACCCACCAGATGTGATAGCTGGT...CCTCCCCTCTGTCCTATTGGAGCAAAGATTGGAGTGAGTGTTGCCACCAACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp GCTCTCTCTCACACACACACATCGATCATCTCCACCAAAACCAATATTTTGACTGGTGGACCAAATGACTaGAGGGGAGCGGCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: ALSHTHTSIISTKTNILTGGPND*RGAAAG
Trigger: GCCTGCAGCCGCTCCCCTCCAGTCATTTGGTCCACC...AGTCAAAATATTGGTTTTGGTGGAGATGATCGATGTGTGTGTGTGAGAGAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp TTGCTGCATTGCCCTGTTATGCTGATTCCCACATCTTGTAGGTCTCTGGGATCAGTACTCCACTCCTCTTaGCGCCGTTCAGACAGATGG +
Preference number: 4 (lower is better)
Translates to: LLHCPVMLIPTSCRSLGSVLHSS*RRSDRW
Trigger: CCATCTGTCTGAACGGCGCCAAGAGGAGTGGAGTAC...TGATCCCAGAGACCTACAAGATGTGGGAATCAGCATAACAGGGCAATGCAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp CTACTGATGGGAGAGTTCCAGTTGAACATCGCAGAAAGAAACCCTCACTTGACATCATCAGGGCTGCAGTaGGGTCCAAGACCAGAGGCA +
Preference number: 4 (lower is better)
Translates to: LLMGEFQLNIAERNPHLTSSGLQ*GPRPEA
Trigger: TGCCTCTGGTCTTGGACCCCACTGCAGCCCTGATGA...TGTCAAGTGAGGGTTTCTTTCTGCGATGTTCAACTGGAACTCTCCCATCAGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp TTGCTGCATTGCCCTGTTATGCTGATTCCCACATCTTGTAGGTCTCTGGGATCATCCCTGTTTCACACATaGCACAAGCCCGCACCTCTC +
Preference number: 4 (lower is better)
Translates to: LLHCPVMLIPTSCRSLGSSLFHT*HKPAPL
Trigger: GAGAGGTGCGGGCTTGTGCCATGTGTGAAACAGGGA...TGATCCCAGAGACCTACAAGATGTGGGAATCAGCATAACAGGGCAATGCAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp GACGCCTTCATTATAAAGTGGGAGTGTTTGTACTCTCAGTACCTAGTCACTTCTGTGGGGCTTAGGGAGTaGGGAGCCCTCTCCTTGCTC +
Preference number: 4 (lower is better)
Translates to: DAFIIKWECLYSQYLVTSVGLRE*GALSLL
Trigger: GAGCAAGGAGAGGGCTCCCCACTCCCTAAGCCCCAC...AGAAGTGACTAGGTACTGAGAGTACAAACACTCCCACTTTATAATGAAGGCGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp GGTGTTTCCCACATGTCTCCAAGGCTCACCCAATTAATCCATTTTGTCAAAATCGTGGGGCTTAGGGAGTaGGGAGCCCTCTCCTTGCTC +
Preference number: 4 (lower is better)
Translates to: GVSHMSPRLTQLIHFVKIVGLRE*GALSLL
Trigger: GAGCAAGGAGAGGGCTCCCCACTCCCTAAGCCCCAC...GATTTTGACAAAATGGATTAATTGGGTGAGCCTTGGAGACATGTGGGAAACACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR TCA 90 bp TCATTTTGTGTCTGCAGGTGTTTCCCACATGTCTCCAAGGCTCACCCAATTAATCCAAGGTTGCAGACCTaGCTGATGCTGTGCACCCAC +
Preference number: 4 (lower is better)
Translates to: SFCVCRCFPHVSKAHPINPRLQT*LMLCTH
Trigger: GTGGGTGCACAGCATCAGTCAGGTCTGCAACCTTGG...ATTAATTGGGTGAGCCTTGGAGACATGTGGGAAACACCTGCAGACACAAAATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR TCA 90 bp GCTGTAGGTGCTCAGAAGGATCAAGAATGGACACTAAATAACACTTCATGCCCACAGAGGAGGTGGCCGTaGTTTCCTCTGAGGCTTGAG +
Preference number: 4 (lower is better)
Translates to: AVGAQKDQEWTLNNTSCPQRRWP*FPLRLE
Trigger: CTCAAGCCTCAGAGGAAATCACGGCCACCTCCTCTG...TGGGCATGAAGTGTTATTTAGTGTCCATTCTTGATCCTTCTGAGCACCTACAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR TCA 90 bp AGGAAAAAGCCAGGTCTGAGGAGAGCCTTCAGTTTCAACTCGGAACTTTTAAAGCAGAGGAGGTGGCCGTaGTTTCCTCTGAGGCTTGAG +
Preference number: 4 (lower is better)
Translates to: RKKPGLRRAFSFNSELLKQRRWP*FPLRLE
Trigger: CTCAAGCCTCAGAGGAAATCACGGCCACCTCCTCTG...CTTTAAAAGTTCCGAGTTGAAACTGAAGGCTCTCCTCAGACCTGGCTTTTTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR TCA 90 bp AACGATAAAATCCTGTTGGTGGCAACACTCACTCCAATCTTTGCTCCAATAGGATCTGGCTGTGTGTGGTaGTGCAGAGCTGGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: NDKILLVATLTPIFAPIGSGCVW*CRAGCG
Trigger: CCCACAGCCAGCTCTGCATCACCACACACAGCCAGA...TCCTATTGGAGCAAAGATTGGAGTGAGTGTTGCCACCAACAGGATTTTATCGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR TCA 90 bp GAGAGCCTTCAGTTTCAACTCGGAACTTTTAAAGGTCATGATTCAGCTGATCCTTCTGGCTGTGTGTGGTaGTGCAGAGCTGGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: ESLQFQLGTFKGHDSADPSGCVW*CRAGCG
Trigger: CCCACAGCCAGCTCTGCATCACCACACACAGCCAGA...AGGATCAGCTGAATCATGACCTTTAAAAGTTCCGAGTTGAAACTGAAGGCTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR TCA 90 bp GACGCCTTCATTATAAAGTGGGAGTGTTTGTACTCTCAGTACCTAGTCACTTCTTCTGGCTGTGTGTGGTaGTGCAGAGCTGGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: DAFIIKWECLYSQYLVTSSGCVW*CRAGCG
Trigger: CCCACAGCCAGCTCTGCATCACCACACACAGCCAGA...AGAAGTGACTAGGTACTGAGAGTACAAACACTCCCACTTTATAATGAAGGCGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR TCA 90 bp CATCCTCTAGCAGTTTTATCAAAGCAGGACATAATTGCCTACACTCTGGAAATGCTGGACTTGCAGGCTTaGGACCCTTGGGTCCCCCGT +
Preference number: 4 (lower is better)
Translates to: HPLAVLSKQDIIAYTLEMLDLQA*DPWVPR
Trigger: ACGGGGGACCCAAGGGTCTCAAGCCTGCAAGTCCAG...CATTTCCAGAGTGTAGGCAATTATGTCCTGCTTTGATAAAACTGCTAGAGGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp ATCGTTATGCTTTTGCATAGCCATCCTCTAGCAGTTTTATCAAAGCAGGACATACCAGCCGGTGCACACTaGGTCGCCCGCACTCATCGT +
Preference number: 4 (lower is better)
Translates to: IVMLLHSHPLAVLSKQDIPAGAH*VARTHR
Trigger: ACGATGAGTGCGGGCGACGCAGTGTGCACCGGCTGG...TATGTCCTGCTTTGATAAAACTGCTAGAGGATGGCTATGCAAAAGCATAACGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp TACTCTCAGTACCTAGTCACTTCTAAAGCAGAAGGGAGCAATTGGCTGGGAAACCTGGAGGGGAGCGGCTaGAGGCAGTCAACAAAAACA +
Preference number: 4 (lower is better)
Translates to: YSQYLVTSKAEGSNWLGNLEGSG*RQSTKT
Trigger: TGTTTTTGTTGACTGCCTGCAGCCGCTCCCCTCCAG...GTTTCCCAGCCAATTGCTCCCTTCTGCTTTAGAAGTGACTAGGTACTGAGAGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp GTAGGTGCTCAGAAGGATCAAGAATGGACACTAAATAACACTTCATGCCCAACTCCTCCTGAGCTCCACTaGCATGGCATGAGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: VGAQKDQEWTLNNTSCPTPPELH*HGMRGG
Trigger: TCCACCCCTCATGCCATGGCAGTGGAGCTCAGGAGG...AGTTGGGCATGAAGTGTTATTTAGTGTCCATTCTTGATCCTTCTGAGCACCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp AACGATAAAATCCTGTTGGTGGCAACACTCACTCCAATCTTTGCTCCAATAGGACCTCCTGAGCTCCACTaGCATGGCATGAGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: NDKILLVATLTPIFAPIGPPELH*HGMRGG
Trigger: TCCACCCCTCATGCCATGGCAGTGGAGCTCAGGAGG...TCCTATTGGAGCAAAGATTGGAGTGAGTGTTGCCACCAACAGGATTTTATCGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp AACGATAAAATCCTGTTGGTGGCAACACTCACTCCAATCTTTGCTCCAATAGGAGGGAGGTTCCAGGTTTaGAGGCAGCTCAGGCAACGG +
Preference number: 4 (lower is better)
Translates to: NDKILLVATLTPIFAPIGGRFQV*RQLRQR
Trigger: CCGTTGCCTGAGCTGCCTGCAAACCTGGAACCTCCC...TCCTATTGGAGCAAAGATTGGAGTGAGTGTTGCCACCAACAGGATTTTATCGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp GGTGTTTCCCACATGTCTCCAAGGCTCACCCAATTAATCCATTTTGTCAAAATCGGGAGGTTCCAGGTTTaGAGGCAGCTCAGGCAACGG +
Preference number: 4 (lower is better)
Translates to: GVSHMSPRLTQLIHFVKIGRFQV*RQLRQR
Trigger: CCGTTGCCTGAGCTGCCTGCAAACCTGGAACCTCCC...GATTTTGACAAAATGGATTAATTGGGTGAGCCTTGGAGACATGTGGGAAACACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp CATCTCCACCAAAACCAATATTTTGACTTATGGTGCCTTTGCTGCTGTCAGCTCCTCCATGGAATCTGCTaGACCATCCTCCAGGTGGCC +
Preference number: 4 (lower is better)
Translates to: HLHQNQYFDLWCLCCCQLLHGIC*TILQVA
Trigger: GGCCACCTGGAGGATGGTGCAGCAGATTCCATGGAG...GAGCTGACAGCAGCAAAGGCACCATAAGTCAAAATATTGGTTTTGGTGGAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424127.3
CDS-3UTR CCA 90 bp CTACTCATTTTGTGTCTGCAGGTGTTTCCCACATGTCTCCAAGGCTCACCCAATGCTCTGACTCACTTCTaGTTTCCTCAGTGGCTACGG +
Preference number: 4 (lower is better)
Translates to: LLILCLQVFPTCLQGSPNALTHF*FPQWLR
Trigger: CCGTAGCCACTGAGGAAACCAGAAGTGAGTCAGAGC...ATTGGGTGAGCCTTGGAGACATGTGGGAAACACCTGCAGACACAAAATGAGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp CTACTCATTTTGTGTCTGCAGGTGTTTCCCACATGTCTCCAAGGCTCACCCAATGTGGGTAGACTGGTATaGTGCAGTCTTCCAGTCTCG +
Preference number: 4 (lower is better)
Translates to: LLILCLQVFPTCLQGSPNVGRLV*CSLPVS
Trigger: CGAGACTGGAAGACTGCACCATACCAGTCTACCCAC...ATTGGGTGAGCCTTGGAGACATGTGGGAAACACCTGCAGACACAAAATGAGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp GACGCCTTCATTATAAAGTGGGAGTGTTTGTACTCTCAGTACCTAGTCACTTCTCTGAGGCCTCGAGGATaGCACCTCCTGAGCTCCACT +
Preference number: 4 (lower is better)
Translates to: DAFIIKWECLYSQYLVTSLRPRG*HLLSST
Trigger: AGTGGAGCTCAGGAGGTGCCATCCTCGAGGCCTCAG...AGAAGTGACTAGGTACTGAGAGTACAAACACTCCCACTTTATAATGAAGGCGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp AACGATAAAATCCTGTTGGTGGCAACACTCACTCCAATCTTTGCTCCAATAGGACTGAGGCCTCGAGGATaGCACCTCCTGAGCTCCACT +
Preference number: 4 (lower is better)
Translates to: NDKILLVATLTPIFAPIGLRPRG*HLLSST
Trigger: AGTGGAGCTCAGGAGGTGCCATCCTCGAGGCCTCAG...TCCTATTGGAGCAAAGATTGGAGTGAGTGTTGCCACCAACAGGATTTTATCGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp TACTCTCAGTACCTAGTCACTTCTAAAGCAGAAGGGAGCAATTGGCTGGGAAACGGTGAAGAAGACAAGTaGTCCCTGGGTGGCCCATTG +
Preference number: 4 (lower is better)
Translates to: YSQYLVTSKAEGSNWLGNGEEDK*SLGGPL
Trigger: CAATGGGCCACCCAGGGACCACTTGTCTTCTTCACC...GTTTCCCAGCCAATTGCTCCCTTCTGCTTTAGAAGTGACTAGGTACTGAGAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp AGGAAAAAGCCAGGTCTGAGGAGAGCCTTCAGTTTCAACTCGGAACTTTTAAAGCAGCCTGGGGGCTCATaGGCACATAGCTGTCTTCGA +
Preference number: 4 (lower is better)
Translates to: RKKPGLRRAFSFNSELLKQPGGS*AHSCLR
Trigger: TCGAAGACAGCTATGTGCCCATGAGCCCCCAGGCTG...CTTTAAAAGTTCCGAGTTGAAACTGAAGGCTCTCCTCAGACCTGGCTTTTTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp GCTGTAGGTGCTCAGAAGGATCAAGAATGGACACTAAATAACACTTCATGCCCACACTGCTCAGGGAACTaGCTGTTCGGTGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: AVGAQKDQEWTLNNTSCPHCSGN*LFGAPP
Trigger: TGGAGGAGCACCGAACAGCCAGTTCCCTGAGCAGTG...TGGGCATGAAGTGTTATTTAGTGTCCATTCTTGATCCTTCTGAGCACCTACAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp CTACTGATGGGAGAGTTCCAGTTGAACATCGCAGAAAGAAACCCTCACTTGACATCCCTGTTTCACACATaGCACAAGCCCGCACCTCTC +
Preference number: 4 (lower is better)
Translates to: LLMGEFQLNIAERNPHLTSLFHT*HKPAPL
Trigger: GAGAGGTGCGGGCTTGTGCCATGTGTGAAACAGGGA...TGTCAAGTGAGGGTTTCTTTCTGCGATGTTCAACTGGAACTCTCCCATCAGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp TACTCTCAGTACCTAGTCACTTCTAAAGCAGAAGGGAGCAATTGGCTGGGAAACGAGGCTGGAACAAGATaGTCTCCAGAGGCCCCTTTG +
Preference number: 4 (lower is better)
Translates to: YSQYLVTSKAEGSNWLGNEAGTR*SPEAPL
Trigger: CAAAGGGGCCTCTGGAGACCATCTTGTTCCAGCCTC...GTTTCCCAGCCAATTGCTCCCTTCTGCTTTAGAAGTGACTAGGTACTGAGAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp TACTCTCAGTACCTAGTCACTTCTAAAGCAGAAGGGAGCAATTGGCTGGGAAACACACGAGACGATGCGTaGGAAAAGGCCAAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: YSQYLVTSKAEGSNWLGNTRDDA*EKAKSS
Trigger: GCTGCTCTTGGCCTTTTCCCACGCATCGTCTCGTGT...GTTTCCCAGCCAATTGCTCCCTTCTGCTTTAGAAGTGACTAGGTACTGAGAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp TTGCTGCATTGCCCTGTTATGCTGATTCCCACATCTTGTAGGTCTCTGGGATCAGGGTTTGTCACCTTCTaGACTTGCAGGCTTGAGACC +
Preference number: 4 (lower is better)
Translates to: LLHCPVMLIPTSCRSLGSGFVTF*TCRLET
Trigger: GGTCTCAAGCCTGCAAGTCCAGAAGGTGACAAACCC...TGATCCCAGAGACCTACAAGATGTGGGAATCAGCATAACAGGGCAATGCAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp CTACTCATTTTGTGTCTGCAGGTGTTTCCCACATGTCTCCAAGGCTCACCCAATAACTCCCAGTGCTCCTaGGTTTGTCACCTTCTGGAC +
Preference number: 4 (lower is better)
Translates to: LLILCLQVFPTCLQGSPNNSQCS*VCHLLD
Trigger: GTCCAGAAGGTGACAAACCCAGGAGCACTGGGAGTT...ATTGGGTGAGCCTTGGAGACATGTGGGAAACACCTGCAGACACAAAATGAGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
3UTR CAA 72 bp AGTCTGTGGAGTAAGATTCTGCCACCATTGCTGGGCTaGATCTCCTCAACTGTCTTCAGAGGCTGGAACAAG +
Preference number: 4 (lower is better)
Translates to: SLWSKILPPLLG*ISSTVFRGWNK
Trigger: CTTGTTCCAGCCTCTGAAGACAGTTGAGGAGATCAAGCCCAGCAATGGTGGCAGAATCTTACTCCACAGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR TCA 90 bp GGTGTTTCCCACATGTCTCCAAGGCTCACCCAATTAATCCATTTTGTCAAAATCACACTGCACACTCGCTaGGGTCTATCACCCGGATGG +
Preference number: 4 (lower is better)
Translates to: GVSHMSPRLTQLIHFVKITLHTR*GLSPGW
Trigger: CCATCCGGGTGATAGACCTCAGCGAGTGTGCAGTGT...GATTTTGACAAAATGGATTAATTGGGTGAGCCTTGGAGACATGTGGGAAACACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR TCA 90 bp AACGATAAAATCCTGTTGGTGGCAACACTCACTCCAATCTTTGCTCCAATAGGAGGTTGCAGACCTGACTaGTGCTGTGCACCCACACCT +
Preference number: 4 (lower is better)
Translates to: NDKILLVATLTPIFAPIGGCRPD*CCAPTP
Trigger: AGGTGTGGGTGCACAGCATCAGTCAGGTCTGCAACC...TCCTATTGGAGCAAAGATTGGAGTGAGTGTTGCCACCAACAGGATTTTATCGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR TCA 90 bp CATCTCCACCAAAACCAATATTTTGACTTATGGTGCCTTTGCTGCTGTCAGCTCGTCTTCGATACTGGCTaGAGCTGTGGGGTACATCGG +
Preference number: 4 (lower is better)
Translates to: HLHQNQYFDLWCLCCCQLVFDTG*SCGVHR
Trigger: CCGATGTACCCCACAGCTTCAGCCAGTATCGAAGAC...GAGCTGACAGCAGCAAAGGCACCATAAGTCAAAATATTGGTTTTGGTGGAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR TCA 90 bp TCTCAGTCAGAATGCAGGACCAGTATCTGCTTAGTTTCCAGCTGTAGGTGCTCAGGCCGTGATTTCCTCTaGGGCTTGAGATCTCTATTC +
Preference number: 4 (lower is better)
Translates to: SQSECRTSICLVSSCRCSGRDFL*GLRSLF
Trigger: GAATAGAGATCTCAAGCCTCAGAGGAAATCACGGCC...TGAGCACCTACAGCTGGAAACTAAGCAGATACTGGTCCTGCATTCTGACTGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR TCA 90 bp AATAGGACAGAGGGGAGGCTAGATTCTCTCAGAGCCCCCTCCGGAAGGCAACTGACTTCTTGTATGGTCTaGAAAAAGAAGACTTTGGCA +
Preference number: 4 (lower is better)
Translates to: NRTEGRLDSLRAPSGRQLTSCMV*KKKTLA
Trigger: TGCCAAAGTCTTCTTTTTTCAGACCATACAAGAAGT...CAGTTGCCTTCCGGAGGGGGCTCTGAGAGAATCTAGCCTCCCCTCTGTCCTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp TCAGAATTTCAGGTATTGGAGTCAAACGATAAAATCCTGTTGGTGGCAACACTCGGACAAACCAGCGCTTaGGCCAGGCGTAGCGCTGTA +
Preference number: 4 (lower is better)
Translates to: SEFQVLESNDKILLVATLGQTSA*ARRSAV
Trigger: TACAGCGCTACGCCTGGCGCAAGCGCTGGTTTGTCC...GAGTGTTGCCACCAACAGGATTTTATCGTTTGACTCCAATACCTGAAATTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp AACGATAAAATCCTGTTGGTGGCAACACTCACTCCAATCTTTGCTCCAATAGGAAAGCTGGGGCCCACATaGTTCCACACTGCACACTCG +
Preference number: 4 (lower is better)
Translates to: NDKILLVATLTPIFAPIGKLGPT*FHTAHS
Trigger: CGAGTGTGCAGTGTGGAAGCATGTGGGCCCCAGCTT...TCCTATTGGAGCAAAGATTGGAGTGAGTGTTGCCACCAACAGGATTTTATCGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp CTACTCATTTTGTGTCTGCAGGTGTTTCCCACATGTCTCCAAGGCTCACCCAATGGTCCTGGTAAGAGATaGATGTTCCCGGATGATCGA +
Preference number: 4 (lower is better)
Translates to: LLILCLQVFPTCLQGSPNGPGKR*MFPDDR
Trigger: TCGATCATCCGGGAACATGCATCTCTTACCAGGACC...ATTGGGTGAGCCTTGGAGACATGTGGGAAACACCTGCAGACACAAAATGAGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp CACATGTCTCCAAGGCTCACCCAATTAATCCATTTTGTCAAAATCCTCAGAGGACTCCATGGAATCTGCTaGACCATCCTCCAGGTGGCC +
Preference number: 4 (lower is better)
Translates to: HMSPRLTQLIHFVKILRGLHGIC*TILQVA
Trigger: GGCCACCTGGAGGATGGTGCAGCAGATTCCATGGAG...TCCTCTGAGGATTTTGACAAAATGGATTAATTGGGTGAGCCTTGGAGACATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369568.8
ENST00000424127.3
CDS-3UTR CCA 90 bp GCTGTAGGTGCTCAGAAGGATCAAGAATGGACACTAAATAACACTTCATGCCCACCCGGATGGGCTTGCTaGAGTGCTTGTTCCTGTAGT +
Preference number: 4 (lower is better)
Translates to: AVGAQKDQEWTLNNTSCPPGWAC*SACSCS
Trigger: ACTACAGGAACAAGCACTCCAGCAAGCCCATCCGGG...TGGGCATGAAGTGTTATTTAGTGTCCATTCTTGATCCTTCTGAGCACCTACAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp TCTCAGTCAGAATGCAGGACCAGTATCTGCTTAGTTTCCAGCTGTAGGTGCTCAATCTGGTGGGTAGACTaGTATGGTGCAGTCTTCCAG +
Preference number: 4 (lower is better)
Translates to: SQSECRTSICLVSSCRCSIWWVD*YGAVFQ
Trigger: CTGGAAGACTGCACCATACCAGTCTACCCACCAGAT...TGAGCACCTACAGCTGGAAACTAAGCAGATACTGGTCCTGCATTCTGACTGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp TTGCTCTGTCCAGGCTCACTAAGGACCCTGAACTCAGTTAAAATACTTAGAAATCTGAGGCCTCGAGGATaGCACCTCCTGAGCTCCACT +
Preference number: 4 (lower is better)
Translates to: LLCPGSLRTLNSVKILRNLRPRG*HLLSST
Trigger: AGTGGAGCTCAGGAGGTGCCATCCTCGAGGCCTCAG...ATTTCTAAGTATTTTAACTGAGTTCAGGGTCCTTAGTGAGCCTGGACAGAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp GCTGTAGGTGCTCAGAAGGATCAAGAATGGACACTAAATAACACTTCATGCCCATACTGGCTGAAGCTGTaGGGTACATCGGGGAGAACC +
Preference number: 4 (lower is better)
Translates to: AVGAQKDQEWTLNNTSCPYWLKL*GTSGRT
Trigger: GGTTCTCCCCGATGTACCCCACAGCTTCAGCCAGTA...TGGGCATGAAGTGTTATTTAGTGTCCATTCTTGATCCTTCTGAGCACCTACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp TCTCAGTCAGAATGCAGGACCAGTATCTGCTTAGTTTCCAGCTGTAGGTGCTCAAGCTGTCTTCGATACTaGCTGAAGCTGTGGGGTACA +
Preference number: 4 (lower is better)
Translates to: SQSECRTSICLVSSCRCSSCLRY*LKLWGT
Trigger: TGTACCCCACAGCTTCAGCCAGTATCGAAGACAGCT...TGAGCACCTACAGCTGGAAACTAAGCAGATACTGGTCCTGCATTCTGACTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp GGTGTTTCCCACATGTCTCCAAGGCTCACCCAATTAATCCATTTTGTCAAAATCCAGCCTGGGGGCTCATaGGCACATAGCTGTCTTCGA +
Preference number: 4 (lower is better)
Translates to: GVSHMSPRLTQLIHFVKIQPGGS*AHSCLR
Trigger: TCGAAGACAGCTATGTGCCCATGAGCCCCCAGGCTG...GATTTTGACAAAATGGATTAATTGGGTGAGCCTTGGAGACATGTGGGAAACACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp CTACTCATTTTGTGTCTGCAGGTGTTTCCCACATGTCTCCAAGGCTCACCCAATGAGATCTCTATTCACTaGGGGAGGTTCCAGGTTTGC +
Preference number: 4 (lower is better)
Translates to: LLILCLQVFPTCLQGSPNEISIH*GRFQVC
Trigger: GCAAACCTGGAACCTCCCCCAGTGAATAGAGATCTC...ATTGGGTGAGCCTTGGAGACATGTGGGAAACACCTGCAGACACAAAATGAGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp GACGCCTTCATTATAAAGTGGGAGTGTTTGTACTCTCAGTACCTAGTCACTTCTCACTGCTCAGGGAACTaGCTGTTCGGTGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: DAFIIKWECLYSQYLVTSHCSGN*LFGAPP
Trigger: TGGAGGAGCACCGAACAGCCAGTTCCCTGAGCAGTG...AGAAGTGACTAGGTACTGAGAGTACAAACACTCCCACTTTATAATGAAGGCGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp AAAAGAAGACTTTGGCATTCACTTACCTGTGGGGTGATTGGAAACCCTGAAATCGTGGTGATGCAGAGCTaGCTGTGGGGCTTAGGGAGT +
Preference number: 4 (lower is better)
Translates to: KRRLWHSLTCGVIGNPEIVVMQS*LWGLGS
Trigger: ACTCCCTAAGCCCCACAGCCAGCTCTGCATCACCAC...GATTTCAGGGTTTCCAATCACCCCACAGGTAAGTGAATGCCAAAGTCTTCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp GTAGGTGCTCAGAAGGATCAAGAATGGACACTAAATAACACTTCATGCCCAACTGCTCCTCACAGGCTCTaGCTGTGTGTGGTGATGCAG +
Preference number: 4 (lower is better)
Translates to: VGAQKDQEWTLNNTSCPTAPHRL*LCVVMQ
Trigger: CTGCATCACCACACACAGCCAGAGCCTGTGAGGAGC...AGTTGGGCATGAAGTGTTATTTAGTGTCCATTCTTGATCCTTCTGAGCACCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR TCA 90 bp TCTGGGATCATTTCTGTAACAAACATTAGGCCCTTGGTTAGAAACATAGCTCTCACACTGCACACTCGCTaGGGTCTATCACCCGGATGG +
Preference number: 4 (lower is better)
Translates to: SGIISVTNIRPLVRNIALTLHTR*GLSPGW
Trigger: CCATCCGGGTGATAGACCTCAGCGAGTGTGCAGTGT...GAGAGCTATGTTTCTAACCAAGGGCCTAATGTTTGTTACAGAAATGATCCCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR TCA 90 bp CACATGTCTCCAAGGCTCACCCAATTAATCCATTTTGTCAAAATCCTCAGAGGATCCACTGCCATGGCATaGGGGGTGGACCAAATGACT +
Preference number: 4 (lower is better)
Translates to: HMSPRLTQLIHFVKILRGSTAMA*GVDQMT
Trigger: AGTCATTTGGTCCACCCCTCATGCCATGGCAGTGGA...TCCTCTGAGGATTTTGACAAAATGGATTAATTGGGTGAGCCTTGGAGACATGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR TCA 90 bp GTAGGTGCTCAGAAGGATCAAGAATGGACACTAAATAACACTTCATGCCCAACTTCCACTGCCATGGCATaGGGGGTGGACCAAATGACT +
Preference number: 4 (lower is better)
Translates to: VGAQKDQEWTLNNTSCPTSTAMA*GVDQMT
Trigger: AGTCATTTGGTCCACCCCTCATGCCATGGCAGTGGA...AGTTGGGCATGAAGTGTTATTTAGTGTCCATTCTTGATCCTTCTGAGCACCTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR TCA 90 bp GCTGTAGGTGCTCAGAAGGATCAAGAATGGACACTAAATAACACTTCATGCCCACCCTGGGTGGCCCATTaGTTTCTCTACTCCAGATCA +
Preference number: 4 (lower is better)
Translates to: AVGAQKDQEWTLNNTSCPPWVAH*FLYSRS
Trigger: TGATCTGGAGTAGAGAAATCAATGGGCCACCCAGGG...TGGGCATGAAGTGTTATTTAGTGTCCATTCTTGATCCTTCTGAGCACCTACAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR TCA 90 bp AGGAAAAAGCCAGGTCTGAGGAGAGCCTTCAGTTTCAACTCGGAACTTTTAAAGCCCTGGGTGGCCCATTaGTTTCTCTACTCCAGATCA +
Preference number: 4 (lower is better)
Translates to: RKKPGLRRAFSFNSELLKPWVAH*FLYSRS
Trigger: TGATCTGGAGTAGAGAAATCAATGGGCCACCCAGGG...CTTTAAAAGTTCCGAGTTGAAACTGAAGGCTCTCCTCAGACCTGGCTTTTTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR TCA 90 bp GACGCCTTCATTATAAAGTGGGAGTGTTTGTACTCTCAGTACCTAGTCACTTCTGTCTTCGATACTGGCTaGAGCTGTGGGGTACATCGG +
Preference number: 4 (lower is better)
Translates to: DAFIIKWECLYSQYLVTSVFDTG*SCGVHR
Trigger: CCGATGTACCCCACAGCTTCAGCCAGTATCGAAGAC...AGAAGTGACTAGGTACTGAGAGTACAAACACTCCCACTTTATAATGAAGGCGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp GGTGTTTCCCACATGTCTCCAAGGCTCACCCAATTAATCCATTTTGTCAAAATCTCACCCGGATGGGCTTaGTGGAGTGCTTGTTCCTGT +
Preference number: 4 (lower is better)
Translates to: GVSHMSPRLTQLIHFVKISPGWA*WSACSC
Trigger: ACAGGAACAAGCACTCCAGCAAGCCCATCCGGGTGA...GATTTTGACAAAATGGATTAATTGGGTGAGCCTTGGAGACATGTGGGAAACACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp GACGCCTTCATTATAAAGTGGGAGTGTTTGTACTCTCAGTACCTAGTCACTTCTTCACCCGGATGGGCTTaGTGGAGTGCTTGTTCCTGT +
Preference number: 4 (lower is better)
Translates to: DAFIIKWECLYSQYLVTSSPGWA*WSACSC
Trigger: ACAGGAACAAGCACTCCAGCAAGCCCATCCGGGTGA...AGAAGTGACTAGGTACTGAGAGTACAAACACTCCCACTTTATAATGAAGGCGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp CTACTCATTTTGTGTCTGCAGGTGTTTCCCACATGTCTCCAAGGCTCACCCAATTGCATTCTGGCTTCTTaGTACCACTGTGTGTACTCC +
Preference number: 4 (lower is better)
Translates to: LLILCLQVFPTCLQGSPNCILAS*YHCVYS
Trigger: GGAGTACACACAGTGGTAGCAAGAAGCCAGAATGCA...ATTGGGTGAGCCTTGGAGACATGTGGGAAACACCTGCAGACACAAAATGAGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp GACGCCTTCATTATAAAGTGGGAGTGTTTGTACTCTCAGTACCTAGTCACTTCTTGTAGTCATCAGGGCTaGAGTGGGGTCCAAGACCAG +
Preference number: 4 (lower is better)
Translates to: DAFIIKWECLYSQYLVTSCSHQG*SGVQDQ
Trigger: CTGGTCTTGGACCCCACTGCAGCCCTGATGACTACA...AGAAGTGACTAGGTACTGAGAGTACAAACACTCCCACTTTATAATGAAGGCGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp CTACTGATGGGAGAGTTCCAGTTGAACATCGCAGAAAGAAACCCTCACTTGACATCCACTCCTGTTTTGTaGTCTGGAGAGCCTGTGTCT +
Preference number: 4 (lower is better)
Translates to: LLMGEFQLNIAERNPHLTSTPVL*SGEPVS
Trigger: AGACACAGGCTCTCCAGAGCACAAAACAGGAGTGGA...TGTCAAGTGAGGGTTTCTTTCTGCGATGTTCAACTGGAACTCTCCCATCAGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp ATTCCATTTTTAAGTAATCACATCCAAACAGGTCACACTACCCATGTGTGTTTCTTGGGTCCCCCGTCCTaGACTGGACGACCCCTGACT +
Preference number: 4 (lower is better)
Translates to: IPFLSNHIQTGHTTHVCFLGPPS*TGRPLT
Trigger: AGTCAGGGGTCGTCCAGTGCAGGACGGGGGACCCAA...GAAACACACATGGGTAGTGTGACCTGTTTGGATGTGATTACTTAAAAATGGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp GCTCTCTCTCACACACACACATCGATCATCTCCACCAAAACCAATATTTTGACTGTCACCTTCTGGACTTaGAGGCTTGAGACCCTTGGG +
Preference number: 4 (lower is better)
Translates to: ALSHTHTSIISTKTNILTVTFWT*RLETLG
Trigger: CCCAAGGGTCTCAAGCCTGCAAGTCCAGAAGGTGAC...AGTCAAAATATTGGTTTTGGTGGAGATGATCGATGTGTGTGTGTGAGAGAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp TACTCTCAGTACCTAGTCACTTCTAAAGCAGAAGGGAGCAATTGGCTGGGAAACTATAGCCAGGCTGTGTaGTGGACATCAAGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: YSQYLVTSKAEGSNWLGNYSQAV*WTSRLF
Trigger: GAAGAGCCTTGATGTCCAGCACACAGCCTGGCTATA...GTTTCCCAGCCAATTGCTCCCTTCTGCTTTAGAAGTGACTAGGTACTGAGAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp AAAAGAAGACTTTGGCATTCACTTACCTGTGGGGTGATTGGAAACCCTGAAATCCCCGGATGGGCTTGCTaGAGTGCTTGTTCCTGTAGT +
Preference number: 4 (lower is better)
Translates to: KRRLWHSLTCGVIGNPEIPGWAC*SACSCS
Trigger: ACTACAGGAACAAGCACTCCAGCAAGCCCATCCGGG...GATTTCAGGGTTTCCAATCACCCCACAGGTAAGTGAATGCCAAAGTCTTCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp GCTGTAGGTGCTCAGAAGGATCAAGAATGGACACTAAATAACACTTCATGCCCAGTGGGTAGACTGGTATaGTGCAGTCTTCCAGTCTCG +
Preference number: 4 (lower is better)
Translates to: AVGAQKDQEWTLNNTSCPVGRLV*CSLPVS
Trigger: CGAGACTGGAAGACTGCACCATACCAGTCTACCCAC...TGGGCATGAAGTGTTATTTAGTGTCCATTCTTGATCCTTCTGAGCACCTACAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp TACTCTCAGTACCTAGTCACTTCTAAAGCAGAAGGGAGCAATTGGCTGGGAAACATCTGGTGGGTAGACTaGTATGGTGCAGTCTTCCAG +
Preference number: 4 (lower is better)
Translates to: YSQYLVTSKAEGSNWLGNIWWVD*YGAVFQ
Trigger: CTGGAAGACTGCACCATACCAGTCTACCCACCAGAT...GTTTCCCAGCCAATTGCTCCCTTCTGCTTTAGAAGTGACTAGGTACTGAGAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp CTACTCATTTTGTGTCTGCAGGTGTTTCCCACATGTCTCCAAGGCTCACCCAATAGCTATCACATCTGGTaGGTAGACTGGTATGGTGCA +
Preference number: 4 (lower is better)
Translates to: LLILCLQVFPTCLQGSPNSYHIW*VDWYGA
Trigger: TGCACCATACCAGTCTACCCACCAGATGTGATAGCT...ATTGGGTGAGCCTTGGAGACATGTGGGAAACACCTGCAGACACAAAATGAGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp TTTTTAAGTAATCACATCCAAACAGGTCACACTACCCATGTGTGTTTCTTCATGGGTGGACCAAATGACTaGAGGGGAGCGGCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: FLSNHIQTGHTTHVCFFMGGPND*RGAAAG
Trigger: GCCTGCAGCCGCTCCCCTCCAGTCATTTGGTCCACC...CATGAAGAAACACACATGGGTAGTGTGACCTGTTTGGATGTGATTACTTAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp GGTGTTTCCCACATGTCTCCAAGGCTCACCCAATTAATCCATTTTGTCAAAATCGGTGAAGAAGACAAGTaGTCCCTGGGTGGCCCATTG +
Preference number: 4 (lower is better)
Translates to: GVSHMSPRLTQLIHFVKIGEEDK*SLGGPL
Trigger: CAATGGGCCACCCAGGGACCACTTGTCTTCTTCACC...GATTTTGACAAAATGGATTAATTGGGTGAGCCTTGGAGACATGTGGGAAACACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp GAGAGCCTTCAGTTTCAACTCGGAACTTTTAAAGGTCATGATTCAGCTGATCCTGGTGAAGAAGACAAGTaGTCCCTGGGTGGCCCATTG +
Preference number: 4 (lower is better)
Translates to: ESLQFQLGTFKGHDSADPGEEDK*SLGGPL
Trigger: CAATGGGCCACCCAGGGACCACTTGTCTTCTTCACC...AGGATCAGCTGAATCATGACCTTTAAAAGTTCCGAGTTGAAACTGAAGGCTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp GACGCCTTCATTATAAAGTGGGAGTGTTTGTACTCTCAGTACCTAGTCACTTCTGTACTCCACTCCTCTTaGCGCCGTTCAGACAGATGG +
Preference number: 4 (lower is better)
Translates to: DAFIIKWECLYSQYLVTSVLHSS*RRSDRW
Trigger: CCATCTGTCTGAACGGCGCCAAGAGGAGTGGAGTAC...AGAAGTGACTAGGTACTGAGAGTACAAACACTCCCACTTTATAATGAAGGCGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp GCTCTCTCTCACACACACACATCGATCATCTCCACCAAAACCAATATTTTGACTGTACTCCACTCCTCTTaGCGCCGTTCAGACAGATGG +
Preference number: 4 (lower is better)
Translates to: ALSHTHTSIISTKTNILTVLHSS*RRSDRW
Trigger: CCATCTGTCTGAACGGCGCCAAGAGGAGTGGAGTAC...AGTCAAAATATTGGTTTTGGTGGAGATGATCGATGTGTGTGTGTGAGAGAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp CACATGTCTCCAAGGCTCACCCAATTAATCCATTTTGTCAAAATCCTCAGAGGATACTGGCTGAAGCTGTaGGGTACATCGGGGAGAACC +
Preference number: 4 (lower is better)
Translates to: HMSPRLTQLIHFVKILRGYWLKL*GTSGRT
Trigger: GGTTCTCCCCGATGTACCCCACAGCTTCAGCCAGTA...TCCTCTGAGGATTTTGACAAAATGGATTAATTGGGTGAGCCTTGGAGACATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp GGTGTTTCCCACATGTCTCCAAGGCTCACCCAATTAATCCATTTTGTCAAAATCTACTGGCTGAAGCTGTaGGGTACATCGGGGAGAACC +
Preference number: 4 (lower is better)
Translates to: GVSHMSPRLTQLIHFVKIYWLKL*GTSGRT
Trigger: GGTTCTCCCCGATGTACCCCACAGCTTCAGCCAGTA...GATTTTGACAAAATGGATTAATTGGGTGAGCCTTGGAGACATGTGGGAAACACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp TCAGAATTTCAGGTATTGGAGTCAAACGATAAAATCCTGTTGGTGGCAACACTCTCATCAGGGCTGCAGTaGGGTCCAAGACCAGAGGCA +
Preference number: 4 (lower is better)
Translates to: SEFQVLESNDKILLVATLSSGLQ*GPRPEA
Trigger: TGCCTCTGGTCTTGGACCCCACTGCAGCCCTGATGA...GAGTGTTGCCACCAACAGGATTTTATCGTTTGACTCCAATACCTGAAATTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp CACATGTCTCCAAGGCTCACCCAATTAATCCATTTTGTCAAAATCCTCAGAGGATCCCTGTTTCACACATaGCACAAGCCCGCACCTCTC +
Preference number: 4 (lower is better)
Translates to: HMSPRLTQLIHFVKILRGSLFHT*HKPAPL
Trigger: GAGAGGTGCGGGCTTGTGCCATGTGTGAAACAGGGA...TCCTCTGAGGATTTTGACAAAATGGATTAATTGGGTGAGCCTTGGAGACATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp AACGATAAAATCCTGTTGGTGGCAACACTCACTCCAATCTTTGCTCCAATAGGAGAGGCTGGAACAAGATaGTCTCCAGAGGCCCCTTTG +
Preference number: 4 (lower is better)
Translates to: NDKILLVATLTPIFAPIGEAGTR*SPEAPL
Trigger: CAAAGGGGCCTCTGGAGACCATCTTGTTCCAGCCTC...TCCTATTGGAGCAAAGATTGGAGTGAGTGTTGCCACCAACAGGATTTTATCGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR TCA 90 bp TACTCTCAGTACCTAGTCACTTCTAAAGCAGAAGGGAGCAATTGGCTGGGAAACAAGGAAGAGAAGCTCTaGCTCACTTCTGGTTTCCTC +
Preference number: 4 (lower is better)
Translates to: YSQYLVTSKAEGSNWLGNKEEKL*LTSGFL
Trigger: GAGGAAACCAGAAGTGAGTCAGAGCTTCTCTTCCTT...GTTTCCCAGCCAATTGCTCCCTTCTGCTTTAGAAGTGACTAGGTACTGAGAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR TCA 90 bp GGTGTTTCCCACATGTCTCCAAGGCTCACCCAATTAATCCATTTTGTCAAAATCCCCTGGGTGGCCCATTaGTTTCTCTACTCCAGATCA +
Preference number: 4 (lower is better)
Translates to: GVSHMSPRLTQLIHFVKIPWVAH*FLYSRS
Trigger: TGATCTGGAGTAGAGAAATCAATGGGCCACCCAGGG...GATTTTGACAAAATGGATTAATTGGGTGAGCCTTGGAGACATGTGGGAAACACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR TCA 90 bp TTGCTCTGTCCAGGCTCACTAAGGACCCTGAACTCAGTTAAAATACTTAGAAATGTCTTCGATACTGGCTaGAGCTGTGGGGTACATCGG +
Preference number: 4 (lower is better)
Translates to: LLCPGSLRTLNSVKILRNVFDTG*SCGVHR
Trigger: CCGATGTACCCCACAGCTTCAGCCAGTATCGAAGAC...ATTTCTAAGTATTTTAACTGAGTTCAGGGTCCTTAGTGAGCCTGGACAGAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR TCA 90 bp CATCTCCACCAAAACCAATATTTTGACTTATGGTGCCTTTGCTGCTGTCAGCTCACTTATCTCAGAGCCTaGGATCCATTGCCCCTGTCA +
Preference number: 4 (lower is better)
Translates to: HLHQNQYFDLWCLCCCQLTYLRA*DPLPLS
Trigger: TGACAGGGGCAATGGATCTCAGGCTCTGAGATAAGT...GAGCTGACAGCAGCAAAGGCACCATAAGTCAAAATATTGGTTTTGGTGGAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR TCA 90 bp CTACTGATGGGAGAGTTCCAGTTGAACATCGCAGAAAGAAACCCTCACTTGACATATGAGGTAGAGGAATaGGCTTGCAATTGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: LLMGEFQLNIAERNPHLTYEVEE*ACNWQP
Trigger: AGGCTGCCAATTGCAAGCTCATTCCTCTACCTCATA...TGTCAAGTGAGGGTTTCTTTCTGCGATGTTCAACTGGAACTCTCCCATCAGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR TCA 90 bp TCATTTTGTGTCTGCAGGTGTTTCCCACATGTCTCCAAGGCTCACCCAATTAATCACTTCATGCCCAACTaGCACCTTCATTCTGGGTCT +
Preference number: 4 (lower is better)
Translates to: SFCVCRCFPHVSKAHPINHFMPN*HLHSGS
Trigger: AGACCCAGAATGAAGGTGTCAGTTGGGCATGAAGTG...ATTAATTGGGTGAGCCTTGGAGACATGTGGGAAACACCTGCAGACACAAAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR TCA 90 bp GCTGTAGGTGCTCAGAAGGATCAAGAATGGACACTAAATAACACTTCATGCCCATGGGAACTAGCAGTTTaGAGCCCTGGTTTCTTGCCT +
Preference number: 4 (lower is better)
Translates to: AVGAQKDQEWTLNNTSCPWELAV*SPGFLP
Trigger: AGGCAAGAAACCAGGGCTTCAAACTGCTAGTTCCCA...TGGGCATGAAGTGTTATTTAGTGTCCATTCTTGATCCTTCTGAGCACCTACAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR TCA 90 bp TTGCTGCATTGCCCTGTTATGCTGATTCCCACATCTTGTAGGTCTCTGGGATCAATCTGGTGTGGTTCTTaGCACTTGGGCCTACAATTT +
Preference number: 4 (lower is better)
Translates to: LLHCPVMLIPTSCRSLGSIWCGS*HLGLQF
Trigger: AAATTGTAGGCCCAAGTGTCAAGAACCACACCAGAT...TGATCCCAGAGACCTACAAGATGTGGGAATCAGCATAACAGGGCAATGCAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR TCA 90 bp TCTCAGTCAGAATGCAGGACCAGTATCTGCTTAGTTTCCAGCTGTAGGTGCTCAGGTGGGTCAATGGAGTaGCATTTCACTACTGACATA +
Preference number: 4 (lower is better)
Translates to: SQSECRTSICLVSSCRCSGGSME*HFTTDI
Trigger: TATGTCAGTAGTGAAATGTCACTCCATTGACCCACC...TGAGCACCTACAGCTGGAAACTAAGCAGATACTGGTCCTGCATTCTGACTGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp GTAGGTGCTCAGAAGGATCAAGAATGGACACTAAATAACACTTCATGCCCAACTGGTAGACTGGTATGGTaGAGTCTTCCAGTCTCGCAG +
Preference number: 4 (lower is better)
Translates to: VGAQKDQEWTLNNTSCPTGRLVW*SLPVSQ
Trigger: CTGCGAGACTGGAAGACTGCACCATACCAGTCTACC...AGTTGGGCATGAAGTGTTATTTAGTGTCCATTCTTGATCCTTCTGAGCACCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp GGTGTTTCCCACATGTCTCCAAGGCTCACCCAATTAATCCATTTTGTCAAAATCGGTAGACTGGTATGGTaGAGTCTTCCAGTCTCGCAG +
Preference number: 4 (lower is better)
Translates to: GVSHMSPRLTQLIHFVKIGRLVW*SLPVSQ
Trigger: CTGCGAGACTGGAAGACTGCACCATACCAGTCTACC...GATTTTGACAAAATGGATTAATTGGGTGAGCCTTGGAGACATGTGGGAAACACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp TCTCAGTCAGAATGCAGGACCAGTATCTGCTTAGTTTCCAGCTGTAGGTGCTCATTCTTGGAACCAGAGTaGATTCTGGCTTCTTGCTAC +
Preference number: 4 (lower is better)
Translates to: SQSECRTSICLVSSCRCSFLEPE*ILASCY
Trigger: GTAGCAAGAAGCCAGAATGCACTCTGGTTCCAAGAA...TGAGCACCTACAGCTGGAAACTAAGCAGATACTGGTCCTGCATTCTGACTGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp GGTGTTTCCCACATGTCTCCAAGGCTCACCCAATTAATCCATTTTGTCAAAATCAGGAGAAGTTTCTGCTaGATGGGGGCTGGTGATGCT +
Preference number: 4 (lower is better)
Translates to: GVSHMSPRLTQLIHFVKIRRSFC*MGAGDA
Trigger: AGCATCACCAGCCCCCATGCAGCAGAAACTTCTCCT...GATTTTGACAAAATGGATTAATTGGGTGAGCCTTGGAGACATGTGGGAAACACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp TCATTTTGTGTCTGCAGGTGTTTCCCACATGTCTCCAAGGCTCACCCAATTAATTACAACTGCCCCAACTaGACTGACTATCATGGGCCT +
Preference number: 4 (lower is better)
Translates to: SFCVCRCFPHVSKAHPINYNCPN*TDYHGP
Trigger: AGGCCCATGATAGTCAGTGCAGTTGGGGCAGTTGTA...ATTAATTGGGTGAGCCTTGGAGACATGTGGGAAACACCTGCAGACACAAAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp CTACTCATTTTGTGTCTGCAGGTGTTTCCCACATGTCTCCAAGGCTCACCCAATAGCAAAGTCTACAACTaGCCCAACTGCACTGACTAT +
Preference number: 4 (lower is better)
Translates to: LLILCLQVFPTCLQGSPNSKVYN*PNCTDY
Trigger: ATAGTCAGTGCAGTTGGGGCAGTTGTAGACTTTGCT...ATTGGGTGAGCCTTGGAGACATGTGGGAAACACCTGCAGACACAAAATGAGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp TACTCTCAGTACCTAGTCACTTCTAAAGCAGAAGGGAGCAATTGGCTGGGAAACACCAGCTATCACATCTaGTGGGTAGACTGGTATGGT +
Preference number: 4 (lower is better)
Translates to: YSQYLVTSKAEGSNWLGNTSYHI*WVDWYG
Trigger: ACCATACCAGTCTACCCACCAGATGTGATAGCTGGT...GTTTCCCAGCCAATTGCTCCCTTCTGCTTTAGAAGTGACTAGGTACTGAGAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp TACTCTCAGTACCTAGTCACTTCTAAAGCAGAAGGGAGCAATTGGCTGGGAAACGCAGAAGGGAGCAATTaGCTGGGAAACCTAAGAATG +
Preference number: 4 (lower is better)
Translates to: YSQYLVTSKAEGSNWLGNAEGSN*LGNLRM
Trigger: CATTCTTAGGTTTCCCAGCCAATTGCTCCCTTCTGC...GTTTCCCAGCCAATTGCTCCCTTCTGCTTTAGAAGTGACTAGGTACTGAGAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp TCATTTTGTGTCTGCAGGTGTTTCCCACATGTCTCCAAGGCTCACCCAATTAATTGGACGACCCCTGACTaGGAGGAATTTTCTAACGAG +
Preference number: 4 (lower is better)
Translates to: SFCVCRCFPHVSKAHPINWTTPD*EEFSNE
Trigger: CTCGTTAGAAAATTCCTCCCAGTCAGGGGTCGTCCA...ATTAATTGGGTGAGCCTTGGAGACATGTGGGAAACACCTGCAGACACAAAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp GCTCTCTCTCACACACACACATCGATCATCTCCACCAAAACCAATATTTTGACTGGGTTTGTCACCTTCTaGACTTGCAGGCTTGAGACC +
Preference number: 4 (lower is better)
Translates to: ALSHTHTSIISTKTNILTGFVTF*TCRLET
Trigger: GGTCTCAAGCCTGCAAGTCCAGAAGGTGACAAACCC...AGTCAAAATATTGGTTTTGGTGGAGATGATCGATGTGTGTGTGTGAGAGAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp AGGAAAAAGCCAGGTCTGAGGAGAGCCTTCAGTTTCAACTCGGAACTTTTAAAGAAGTGGACTGTACAGTaGGTAGGTCGCTTCGTGTCT +
Preference number: 4 (lower is better)
Translates to: RKKPGLRRAFSFNSELLKKWTVQ*VGRFVS
Trigger: AGACACGAAGCGACCTACCCACTGTACAGTCCACTT...CTTTAAAAGTTCCGAGTTGAAACTGAAGGCTCTCCTCAGACCTGGCTTTTTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp GCTGTAGGTGCTCAGAAGGATCAAGAATGGACACTAAATAACACTTCATGCCCAAAGAGAGGCTCTCCATaGAATCTGCTGCACCATCCT +
Preference number: 4 (lower is better)
Translates to: AVGAQKDQEWTLNNTSCPKRGSP*NLLHHP
Trigger: AGGATGGTGCAGCAGATTCCATGGAGAGCCTCTCTT...TGGGCATGAAGTGTTATTTAGTGTCCATTCTTGATCCTTCTGAGCACCTACAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369568.8
ENST00000424127.3
CDS-3UTR TCA 90 bp ATTCCATTTTTAAGTAATCACATCCAAACAGGTCACACTACCCATGTGTGTTTCCCAAGGTTGCAGACCTaGCTGATGCTGTGCACCCAC +
Preference number: 4 (lower is better)
Translates to: IPFLSNHIQTGHTTHVCFPRLQT*LMLCTH
Trigger: GTGGGTGCACAGCATCAGTCAGGTCTGCAACCTTGG...GAAACACACATGGGTAGTGTGACCTGTTTGGATGTGATTACTTAAAAATGGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR TCA 90 bp CAAAAACTACCTGTACTTTGTTTCCTTGAATCGTTATGCTTTTGCATAGCCATCCCAAGGTTGCAGACCTaGCTGATGCTGTGCACCCAC +
Preference number: 4 (lower is better)
Translates to: QKLPVLCFLESLCFCIAIPRLQT*LMLCTH
Trigger: GTGGGTGCACAGCATCAGTCAGGTCTGCAACCTTGG...GATGGCTATGCAAAAGCATAACGATTCAAGGAAACAAAGTACAGGTAGTTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR TCA 90 bp AGGAAAAAGCCAGGTCTGAGGAGAGCCTTCAGTTTCAACTCGGAACTTTTAAAGAAGGAAGAGAAGCTCTaGCTCACTTCTGGTTTCCTC +
Preference number: 4 (lower is better)
Translates to: RKKPGLRRAFSFNSELLKKEEKL*LTSGFL
Trigger: GAGGAAACCAGAAGTGAGTCAGAGCTTCTCTTCCTT...CTTTAAAAGTTCCGAGTTGAAACTGAAGGCTCTCCTCAGACCTGGCTTTTTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR TCA 90 bp CATCTCCACCAAAACCAATATTTTGACTTATGGTGCCTTTGCTGCTGTCAGCTCACTTTCCAGCAATGGTaGAGAAGACAAGTGGTCCCT +
Preference number: 4 (lower is better)
Translates to: HLHQNQYFDLWCLCCCQLTFQQW*RRQVVP
Trigger: AGGGACCACTTGTCTTCTTCACCATTGCTGGAAAGT...GAGCTGACAGCAGCAAAGGCACCATAAGTCAAAATATTGGTTTTGGTGGAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR TCA 90 bp TTTTTAAGTAATCACATCCAAACAGGTCACACTACCCATGTGTGTTTCTTCATGCAGAGGAGGTGGCCGTaGTTTCCTCTGAGGCTTGAG +
Preference number: 4 (lower is better)
Translates to: FLSNHIQTGHTTHVCFFMQRRWP*FPLRLE
Trigger: CTCAAGCCTCAGAGGAAATCACGGCCACCTCCTCTG...CATGAAGAAACACACATGGGTAGTGTGACCTGTTTGGATGTGATTACTTAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR TCA 90 bp CTACTCATTTTGTGTCTGCAGGTGTTTCCCACATGTCTCCAAGGCTCACCCAATTTCTGGCCAAGACCTTaGAAACTACACATTCTCTCT +
Preference number: 4 (lower is better)
Translates to: LLILCLQVFPTCLQGSPNFWPRP*KLHILS
Trigger: AGAGAGAATGTGTAGTTTTCAAGGTCTTGGCCAGAA...ATTGGGTGAGCCTTGGAGACATGTGGGAAACACCTGCAGACACAAAATGAGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR TCA 90 bp GCTGTAGGTGCTCAGAAGGATCAAGAATGGACACTAAATAACACTTCATGCCCAGCCACCAGTGTCATCTaGTATACTTATCTCAGAGCC +
Preference number: 4 (lower is better)
Translates to: AVGAQKDQEWTLNNTSCPATSVI*YTYLRA
Trigger: GGCTCTGAGATAAGTATATCAGATGACACTGGTGGC...TGGGCATGAAGTGTTATTTAGTGTCCATTCTTGATCCTTCTGAGCACCTACAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR TCA 90 bp GTAGGTGCTCAGAAGGATCAAGAATGGACACTAAATAACACTTCATGCCCAACTCACTTCATGCCCAACTaGCACCTTCATTCTGGGTCT +
Preference number: 4 (lower is better)
Translates to: VGAQKDQEWTLNNTSCPTHFMPN*HLHSGS
Trigger: AGACCCAGAATGAAGGTGTCAGTTGGGCATGAAGTG...AGTTGGGCATGAAGTGTTATTTAGTGTCCATTCTTGATCCTTCTGAGCACCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR TCA 90 bp AAAAGAAGACTTTGGCATTCACTTACCTGTGGGGTGATTGGAAACCCTGAAATCCACTTACCTGTGGGGTaGTTGGAAACCCTGAAATCC +
Preference number: 4 (lower is better)
Translates to: KRRLWHSLTCGVIGNPEIHLPVG*LETLKS
Trigger: GGATTTCAGGGTTTCCAATCACCCCACAGGTAAGTG...GATTTCAGGGTTTCCAATCACCCCACAGGTAAGTGAATGCCAAAGTCTTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR TCA 90 bp AAAAGAAGACTTTGGCATTCACTTACCTGTGGGGTGATTGGAAACCCTGAAATCCCCTGGTTTCTTGCCTaGGACTCTTTGCAAGTCACA +
Preference number: 4 (lower is better)
Translates to: KRRLWHSLTCGVIGNPEIPWFLA*DSLQVT
Trigger: TGTGACTTGCAAAGAGTCTCAGGCAAGAAACCAGGG...GATTTCAGGGTTTCCAATCACCCCACAGGTAAGTGAATGCCAAAGTCTTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR TCA 90 bp AAAAGAAGACTTTGGCATTCACTTACCTGTGGGGTGATTGGAAACCCTGAAATCGGAAAAAGCCAGGTCTaGGGAGAGCCTTCAGTTTCA +
Preference number: 4 (lower is better)
Translates to: KRRLWHSLTCGVIGNPEIGKSQV*GEPSVS
Trigger: TGAAACTGAAGGCTCTCCTCAGACCTGGCTTTTTCC...GATTTCAGGGTTTCCAATCACCCCACAGGTAAGTGAATGCCAAAGTCTTCTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR TCA 90 bp CACATGTCTCCAAGGCTCACCCAATTAATCCATTTTGTCAAAATCCTCAGAGGAGGAAAAAGCCAGGTCTaGGGAGAGCCTTCAGTTTCA +
Preference number: 4 (lower is better)
Translates to: HMSPRLTQLIHFVKILRGGKSQV*GEPSVS
Trigger: TGAAACTGAAGGCTCTCCTCAGACCTGGCTTTTTCC...TCCTCTGAGGATTTTGACAAAATGGATTAATTGGGTGAGCCTTGGAGACATGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp GCTCTCTCTCACACACACACATCGATCATCTCCACCAAAACCAATATTTTGACTCACATGCTTCCACACTaGACACTCGCTGAGGTCTAT +
Preference number: 4 (lower is better)
Translates to: ALSHTHTSIISTKTNILTHMLPH*TLAEVY
Trigger: ATAGACCTCAGCGAGTGTGCAGTGTGGAAGCATGTG...AGTCAAAATATTGGTTTTGGTGGAGATGATCGATGTGTGTGTGTGAGAGAGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp TTGCTCTGTCCAGGCTCACTAAGGACCCTGAACTCAGTTAAAATACTTAGAAATGGTAGACTGGTATGGTaGAGTCTTCCAGTCTCGCAG +
Preference number: 4 (lower is better)
Translates to: LLCPGSLRTLNSVKILRNGRLVW*SLPVSQ
Trigger: CTGCGAGACTGGAAGACTGCACCATACCAGTCTACC...ATTTCTAAGTATTTTAACTGAGTTCAGGGTCCTTAGTGAGCCTGGACAGAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp CTACTGATGGGAGAGTTCCAGTTGAACATCGCAGAAAGAAACCCTCACTTGACATTCTTGGAACCAGAGTaGATTCTGGCTTCTTGCTAC +
Preference number: 4 (lower is better)
Translates to: LLMGEFQLNIAERNPHLTFLEPE*ILASCY
Trigger: GTAGCAAGAAGCCAGAATGCACTCTGGTTCCAAGAA...TGTCAAGTGAGGGTTTCTTTCTGCGATGTTCAACTGGAACTCTCCCATCAGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp GACGCCTTCATTATAAAGTGGGAGTGTTTGTACTCTCAGTACCTAGTCACTTCTGAGCCTGAGATCCATTaGCCCTGTCACTTGTCTTTC +
Preference number: 4 (lower is better)
Translates to: DAFIIKWECLYSQYLVTSEPEIH*PCHLSF
Trigger: GAAAGACAAGTGACAGGGGCAATGGATCTCAGGCTC...AGAAGTGACTAGGTACTGAGAGTACAAACACTCCCACTTTATAATGAAGGCGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp GACGCCTTCATTATAAAGTGGGAGTGTTTGTACTCTCAGTACCTAGTCACTTCTTACAACTGCCCCAACTaGACTGACTATCATGGGCCT +
Preference number: 4 (lower is better)
Translates to: DAFIIKWECLYSQYLVTSYNCPN*TDYHGP
Trigger: AGGCCCATGATAGTCAGTGCAGTTGGGGCAGTTGTA...AGAAGTGACTAGGTACTGAGAGTACAAACACTCCCACTTTATAATGAAGGCGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp GTAGGTGCTCAGAAGGATCAAGAATGGACACTAAATAACACTTCATGCCCAACTTACAACTGCCCCAACTaGACTGACTATCATGGGCCT +
Preference number: 4 (lower is better)
Translates to: VGAQKDQEWTLNNTSCPTYNCPN*TDYHGP
Trigger: AGGCCCATGATAGTCAGTGCAGTTGGGGCAGTTGTA...AGTTGGGCATGAAGTGTTATTTAGTGTCCATTCTTGATCCTTCTGAGCACCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp AAAAGAAGACTTTGGCATTCACTTACCTGTGGGGTGATTGGAAACCCTGAAATCTATAGCCAGGCTGTGTaGTGGACATCAAGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: KRRLWHSLTCGVIGNPEIYSQAV*WTSRLF
Trigger: GAAGAGCCTTGATGTCCAGCACACAGCCTGGCTATA...GATTTCAGGGTTTCCAATCACCCCACAGGTAAGTGAATGCCAAAGTCTTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp GGTGTTTCCCACATGTCTCCAAGGCTCACCCAATTAATCCATTTTGTCAAAATCAAGAGAGGCTCTCCATaGAATCTGCACCATCCTCCA +
Preference number: 4 (lower is better)
Translates to: GVSHMSPRLTQLIHFVKIKRGSP*NLHHPP
Trigger: TGGAGGATGGTGCAGATTCCATGGAGAGCCTCTCTT...GATTTTGACAAAATGGATTAATTGGGTGAGCCTTGGAGACATGTGGGAAACACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369575.7
CDS-3UTR CCA 90 bp CATCTCCACCAAAACCAATATTTTGACTTATGGTGCCTTTGCTGCTGTCAGCTCACCAGCTATCACATCTaGTGGGTAGACTGGTATGGT +
Preference number: 4 (lower is better)
Translates to: HLHQNQYFDLWCLCCCQLTSYHI*WVDWYG
Trigger: ACCATACCAGTCTACCCACCAGATGTGATAGCTGGT...GAGCTGACAGCAGCAAAGGCACCATAAGTCAAAATATTGGTTTTGGTGGAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp TCATTTTGTGTCTGCAGGTGTTTCCCACATGTCTCCAAGGCTCACCCAATTAATGAGGGAGATTCTTCTTaGAACCAGAGTGCATTCTGG +
Preference number: 4 (lower is better)
Translates to: SFCVCRCFPHVSKAHPINEGDSS*NQSAFW
Trigger: CCAGAATGCACTCTGGTTCCAAGAAGAATCTCCCTC...ATTAATTGGGTGAGCCTTGGAGACATGTGGGAAACACCTGCAGACACAAAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp AAAAGAAGACTTTGGCATTCACTTACCTGTGGGGTGATTGGAAACCCTGAAATCCGGGGAGAACCTGCATaGCAAATTCAAACTAAGCCG +
Preference number: 4 (lower is better)
Translates to: KRRLWHSLTCGVIGNPEIRGEPA*QIQTKP
Trigger: CGGCTTAGTTTGAATTTGCCATGCAGGTTCTCCCCG...GATTTCAGGGTTTCCAATCACCCCACAGGTAAGTGAATGCCAAAGTCTTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp GAGAGCCTTCAGTTTCAACTCGGAACTTTTAAAGGTCATGATTCAGCTGATCCTCGGGGAGAACCTGCATaGCAAATTCAAACTAAGCCG +
Preference number: 4 (lower is better)
Translates to: ESLQFQLGTFKGHDSADPRGEPA*QIQTKP
Trigger: CGGCTTAGTTTGAATTTGCCATGCAGGTTCTCCCCG...AGGATCAGCTGAATCATGACCTTTAAAAGTTCCGAGTTGAAACTGAAGGCTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp AACGATAAAATCCTGTTGGTGGCAACACTCACTCCAATCTTTGCTCCAATAGGAAGCTGTCTTCGATACTaGCTGAAGCTGTGGGGTACA +
Preference number: 4 (lower is better)
Translates to: NDKILLVATLTPIFAPIGSCLRY*LKLWGT
Trigger: TGTACCCCACAGCTTCAGCCAGTATCGAAGACAGCT...TCCTATTGGAGCAAAGATTGGAGTGAGTGTTGCCACCAACAGGATTTTATCGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp CAAAAACTACCTGTACTTTGTTTCCTTGAATCGTTATGCTTTTGCATAGCCATCCAGCCTGGGGGCTCATaGGCACATAGCTGTCTTCGA +
Preference number: 4 (lower is better)
Translates to: QKLPVLCFLESLCFCIAIQPGGS*AHSCLR
Trigger: TCGAAGACAGCTATGTGCCCATGAGCCCCCAGGCTG...GATGGCTATGCAAAAGCATAACGATTCAAGGAAACAAAGTACAGGTAGTTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp GACGCCTTCATTATAAAGTGGGAGTGTTTGTACTCTCAGTACCTAGTCACTTCTGAAGTTTCTGCTGCATaGGGGCTGGTGATGCTGAAT +
Preference number: 4 (lower is better)
Translates to: DAFIIKWECLYSQYLVTSEVSAA*GLVMLN
Trigger: ATTCAGCATCACCAGCCCCCATGCAGCAGAAACTTC...AGAAGTGACTAGGTACTGAGAGTACAAACACTCCCACTTTATAATGAAGGCGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp AACGATAAAATCCTGTTGGTGGCAACACTCACTCCAATCTTTGCTCCAATAGGAGAAGTTTCTGCTGCATaGGGGCTGGTGATGCTGAAT +
Preference number: 4 (lower is better)
Translates to: NDKILLVATLTPIFAPIGEVSAA*GLVMLN
Trigger: ATTCAGCATCACCAGCCCCCATGCAGCAGAAACTTC...TCCTATTGGAGCAAAGATTGGAGTGAGTGTTGCCACCAACAGGATTTTATCGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp AACGATAAAATCCTGTTGGTGGCAACACTCACTCCAATCTTTGCTCCAATAGGATCCTGTTTTGTGCTCTaGAGAGCCTGTGTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: NDKILLVATLTPIFAPIGSCFVL*RACVFC
Trigger: GCAGAAGACACAGGCTCTCCAGAGCACAAAACAGGA...TCCTATTGGAGCAAAGATTGGAGTGAGTGTTGCCACCAACAGGATTTTATCGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp GGTGTTTCCCACATGTCTCCAAGGCTCACCCAATTAATCCATTTTGTCAAAATCTCCTGTTTTGTGCTCTaGAGAGCCTGTGTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: GVSHMSPRLTQLIHFVKISCFVL*RACVFC
Trigger: GCAGAAGACACAGGCTCTCCAGAGCACAAAACAGGA...GATTTTGACAAAATGGATTAATTGGGTGAGCCTTGGAGACATGTGGGAAACACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp TCATTTTGTGTCTGCAGGTGTTTCCCACATGTCTCCAAGGCTCACCCAATTAATACTGTCTTCAGAGGCTaGAACAAGATGGTCTCCAGA +
Preference number: 4 (lower is better)
Translates to: SFCVCRCFPHVSKAHPINTVFRG*NKMVSR
Trigger: TCTGGAGACCATCTTGTTCCAGCCTCTGAAGACAGT...ATTAATTGGGTGAGCCTTGGAGACATGTGGGAAACACCTGCAGACACAAAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp AGGAAAAAGCCAGGTCTGAGGAGAGCCTTCAGTTTCAACTCGGAACTTTTAAAGACTGTCTTCAGAGGCTaGAACAAGATGGTCTCCAGA +
Preference number: 4 (lower is better)
Translates to: RKKPGLRRAFSFNSELLKTVFRG*NKMVSR
Trigger: TCTGGAGACCATCTTGTTCCAGCCTCTGAAGACAGT...CTTTAAAAGTTCCGAGTTGAAACTGAAGGCTCTCCTCAGACCTGGCTTTTTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp CTACTGATGGGAGAGTTCCAGTTGAACATCGCAGAAAGAAACCCTCACTTGACACTCTATTCTCTAAGCTaGACTCTGGGTCTTGGCTTT +
Preference number: 4 (lower is better)
Translates to: LLMGEFQLNIAERNPHLTLYSLS*TLGLGF
Trigger: AAAGCCAAGACCCAGAGTCCAGCTTAGAGAATAGAG...TGTCAAGTGAGGGTTTCTTTCTGCGATGTTCAACTGGAACTCTCCCATCAGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp TACTCTCAGTACCTAGTCACTTCTAAAGCAGAAGGGAGCAATTGGCTGGGAAACCTCTATTCTCTAAGCTaGACTCTGGGTCTTGGCTTT +
Preference number: 4 (lower is better)
Translates to: YSQYLVTSKAEGSNWLGNLYSLS*TLGLGF
Trigger: AAAGCCAAGACCCAGAGTCCAGCTTAGAGAATAGAG...GTTTCCCAGCCAATTGCTCCCTTCTGCTTTAGAAGTGACTAGGTACTGAGAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp TCATTTTGTGTCTGCAGGTGTTTCCCACATGTCTCCAAGGCTCACCCAATTAATGCAGAAGGGAGCAATTaGCTGGGAAACCTAAGAATG +
Preference number: 4 (lower is better)
Translates to: SFCVCRCFPHVSKAHPINAEGSN*LGNLRM
Trigger: CATTCTTAGGTTTCCCAGCCAATTGCTCCCTTCTGC...ATTAATTGGGTGAGCCTTGGAGACATGTGGGAAACACCTGCAGACACAAAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp GTAGGTGCTCAGAAGGATCAAGAATGGACACTAAATAACACTTCATGCCCAACTTCTTTGCAAGTCACATaGGGAAGAAGGCAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: VGAQKDQEWTLNNTSCPTSLQVT*GRRQLL
Trigger: GAGGAGCTGCCTTCTTCCCCATGTGACTTGCAAAGA...AGTTGGGCATGAAGTGTTATTTAGTGTCCATTCTTGATCCTTCTGAGCACCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp AACGATAAAATCCTGTTGGTGGCAACACTCACTCCAATCTTTGCTCCAATAGGATCTTTGCAAGTCACATaGGGAAGAAGGCAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: NDKILLVATLTPIFAPIGSLQVT*GRRQLL
Trigger: GAGGAGCTGCCTTCTTCCCCATGTGACTTGCAAAGA...TCCTATTGGAGCAAAGATTGGAGTGAGTGTTGCCACCAACAGGATTTTATCGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp TCAGAATTTCAGGTATTGGAGTCAAACGATAAAATCCTGTTGGTGGCAACACTCAACTCCCAGTGCTCCTaGGTTTGTCACCTTCTGGAC +
Preference number: 4 (lower is better)
Translates to: SEFQVLESNDKILLVATLNSQCS*VCHLLD
Trigger: GTCCAGAAGGTGACAAACCCAGGAGCACTGGGAGTT...GAGTGTTGCCACCAACAGGATTTTATCGTTTGACTCCAATACCTGAAATTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp ATCGTTATGCTTTTGCATAGCCATCCTCTAGCAGTTTTATCAAAGCAGGACATAAGCCAGGCTGTGTGCTaGACATCAAGGCTCTTCCCT +
Preference number: 4 (lower is better)
Translates to: IVMLLHSHPLAVLSKQDISQAVC*TSRLFP
Trigger: AGGGAAGAGCCTTGATGTCCAGCACACAGCCTGGCT...TATGTCCTGCTTTGATAAAACTGCTAGAGGATGGCTATGCAAAAGCATAACGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp CACATGTCTCCAAGGCTCACCCAATTAATCCATTTTGTCAAAATCCTCAGAGGAGCTGATCCTGTGAAGTaGACTGTACAGTGGGTAGGT +
Preference number: 4 (lower is better)
Translates to: HMSPRLTQLIHFVKILRGADPVK*TVQWVG
Trigger: ACCTACCCACTGTACAGTCCACTTCACAGGATCAGC...TCCTCTGAGGATTTTGACAAAATGGATTAATTGGGTGAGCCTTGGAGACATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp GAGAGCCTTCAGTTTCAACTCGGAACTTTTAAAGGTCATGATTCAGCTGATCCTTTGTGGGTGCAGAGATaGTATGAACAGGGACTGAGG +
Preference number: 4 (lower is better)
Translates to: ESLQFQLGTFKGHDSADPLWVQR*YEQGLR
Trigger: CCTCAGTCCCTGTTCATACCATCTCTGCACCCACAA...AGGATCAGCTGAATCATGACCTTTAAAAGTTCCGAGTTGAAACTGAAGGCTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp GGTGTTTCCCACATGTCTCCAAGGCTCACCCAATTAATCCATTTTGTCAAAATCAAGAGAGGCTCTCCATaGAATCTGCTGCACCATCCT +
Preference number: 4 (lower is better)
Translates to: GVSHMSPRLTQLIHFVKIKRGSP*NLLHHP
Trigger: AGGATGGTGCAGCAGATTCCATGGAGAGCCTCTCTT...GATTTTGACAAAATGGATTAATTGGGTGAGCCTTGGAGACATGTGGGAAACACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369568.8
ENST00000424127.3
3UTR CAA 72 bp AGCCTGAGATCCATTGCCCCTGTCACTTGTCTTTCTTaGGGTATTGAAATGACTAGTCTGCTGAAGTCTGTG +
Preference number: 4 (lower is better)
Translates to: SLRSIAPVTCLS*GIEMTSLLKSV
Trigger: CACAGACTTCAGCAGACTAGTCATTTCAATACCCAAAGAAAGACAAGTGACAGGGGCAATGGATCTCAGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR TCA 90 bp ATTCCATTTTTAAGTAATCACATCCAAACAGGTCACACTACCCATGTGTGTTTCTCCACTGCCATGGCATaGGGGGTGGACCAAATGACT +
Preference number: 4 (lower is better)
Translates to: IPFLSNHIQTGHTTHVCFSTAMA*GVDQMT
Trigger: AGTCATTTGGTCCACCCCTCATGCCATGGCAGTGGA...GAAACACACATGGGTAGTGTGACCTGTTTGGATGTGATTACTTAAAAATGGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR TCA 90 bp CACATGTCTCCAAGGCTCACCCAATTAATCCATTTTGTCAAAATCCTCAGAGGAATTTCCTCTGAGGCTTaGGATCTCTATTCACTGGGG +
Preference number: 4 (lower is better)
Translates to: HMSPRLTQLIHFVKILRGISSEA*DLYSLG
Trigger: CCCCAGTGAATAGAGATCTCAAGCCTCAGAGGAAAT...TCCTCTGAGGATTTTGACAAAATGGATTAATTGGGTGAGCCTTGGAGACATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR TCA 90 bp CATCCTCTAGCAGTTTTATCAAAGCAGGACATAATTGCCTACACTCTGGAAATGGGCCGTGATTTCCTCTaGGGCTTGAGATCTCTATTC +
Preference number: 4 (lower is better)
Translates to: HPLAVLSKQDIIAYTLEMGRDFL*GLRSLF
Trigger: GAATAGAGATCTCAAGCCTCAGAGGAAATCACGGCC...CATTTCCAGAGTGTAGGCAATTATGTCCTGCTTTGATAAAACTGCTAGAGGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR TCA 90 bp TCAGAATTTCAGGTATTGGAGTCAAACGATAAAATCCTGTTGGTGGCAACACTCACTTATCTCAGAGCCTaGGATCCATTGCCCCTGTCA +
Preference number: 4 (lower is better)
Translates to: SEFQVLESNDKILLVATLTYLRA*DPLPLS
Trigger: TGACAGGGGCAATGGATCTCAGGCTCTGAGATAAGT...GAGTGTTGCCACCAACAGGATTTTATCGTTTGACTCCAATACCTGAAATTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR TCA 90 bp TCTGGGATCATTTCTGTAACAAACATTAGGCCCTTGGTTAGAAACATAGCTCTCACTTATCTCAGAGCCTaGGATCCATTGCCCCTGTCA +
Preference number: 4 (lower is better)
Translates to: SGIISVTNIRPLVRNIALTYLRA*DPLPLS
Trigger: TGACAGGGGCAATGGATCTCAGGCTCTGAGATAAGT...GAGAGCTATGTTTCTAACCAAGGGCCTAATGTTTGTTACAGAAATGATCCCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR TCA 90 bp GTAGGTGCTCAGAAGGATCAAGAATGGACACTAAATAACACTTCATGCCCAACTGCCACCAGTGTCATCTaGTATACTTATCTCAGAGCC +
Preference number: 4 (lower is better)
Translates to: VGAQKDQEWTLNNTSCPTATSVI*YTYLRA
Trigger: GGCTCTGAGATAAGTATATCAGATGACACTGGTGGC...AGTTGGGCATGAAGTGTTATTTAGTGTCCATTCTTGATCCTTCTGAGCACCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR TCA 90 bp AGGAAAAAGCCAGGTCTGAGGAGAGCCTTCAGTTTCAACTCGGAACTTTTAAAGGAAAGGGAGACAGGATaGCTACTCATTTTGTGTCTG +
Preference number: 4 (lower is better)
Translates to: RKKPGLRRAFSFNSELLKERETG*LLILCL
Trigger: CAGACACAAAATGAGTAGTCATCCTGTCTCCCTTTC...CTTTAAAAGTTCCGAGTTGAAACTGAAGGCTCTCCTCAGACCTGGCTTTTTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR TCA 90 bp GCTGTAGGTGCTCAGAAGGATCAAGAATGGACACTAAATAACACTTCATGCCCAGGTGATTGGAAACCCTaGAATCCTGTAGCAAAGTCT +
Preference number: 4 (lower is better)
Translates to: AVGAQKDQEWTLNNTSCPGDWKP*NPVAKS
Trigger: AGACTTTGCTACAGGATTTCAGGGTTTCCAATCACC...TGGGCATGAAGTGTTATTTAGTGTCCATTCTTGATCCTTCTGAGCACCTACAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR TCA 90 bp TCTGGGATCATTTCTGTAACAAACATTAGGCCCTTGGTTAGAAACATAGCTCTCCCCTGGTTTCTTGCCTaGGACTCTTTGCAAGTCACA +
Preference number: 4 (lower is better)
Translates to: SGIISVTNIRPLVRNIALPWFLA*DSLQVT
Trigger: TGTGACTTGCAAAGAGTCTCAGGCAAGAAACCAGGG...GAGAGCTATGTTTCTAACCAAGGGCCTAATGTTTGTTACAGAAATGATCCCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR TCA 90 bp TCAGAATTTCAGGTATTGGAGTCAAACGATAAAATCCTGTTGGTGGCAACACTCTGGGAACTAGCAGTTTaGAGCCCTGGTTTCTTGCCT +
Preference number: 4 (lower is better)
Translates to: SEFQVLESNDKILLVATLWELAV*SPGFLP
Trigger: AGGCAAGAAACCAGGGCTTCAAACTGCTAGTTCCCA...GAGTGTTGCCACCAACAGGATTTTATCGTTTGACTCCAATACCTGAAATTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR TCA 90 bp AACGATAAAATCCTGTTGGTGGCAACACTCACTCCAATCTTTGCTCCAATAGGACCTACACTCTGGAAATaGGGGGTGAGTCACCTTTTT +
Preference number: 4 (lower is better)
Translates to: NDKILLVATLTPIFAPIGPTLWK*GVSHLF
Trigger: AAAAAGGTGACTCACCCCTCATTTCCAGAGTGTAGG...TCCTATTGGAGCAAAGATTGGAGTGAGTGTTGCCACCAACAGGATTTTATCGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp TTGCTCTGTCCAGGCTCACTAAGGACCCTGAACTCAGTTAAAATACTTAGAAATCACACCTGCATTTCTTaGTCAGTTTTGGCCACCAGG +
Preference number: 4 (lower is better)
Translates to: LLCPGSLRTLNSVKILRNHTCIS*SVLATR
Trigger: CCTGGTGGCCAAAACTGAGCAAGAAATGCAGGTGTG...ATTTCTAAGTATTTTAACTGAGTTCAGGGTCCTTAGTGAGCCTGGACAGAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp AAAAGAAGACTTTGGCATTCACTTACCTGTGGGGTGATTGGAAACCCTGAAATCCTGTGCACCCACACCTaGATTTCTTGCTCAGTTTTG +
Preference number: 4 (lower is better)
Translates to: KRRLWHSLTCGVIGNPEILCTHT*ISCSVL
Trigger: CAAAACTGAGCAAGAAATGCAGGTGTGGGTGCACAG...GATTTCAGGGTTTCCAATCACCCCACAGGTAAGTGAATGCCAAAGTCTTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp ATTCCATTTTTAAGTAATCACATCCAAACAGGTCACACTACCCATGTGTGTTTCCTGGAGGGGAGCGGCTaGAGGCAGTCAACAAAAACA +
Preference number: 4 (lower is better)
Translates to: IPFLSNHIQTGHTTHVCFLEGSG*RQSTKT
Trigger: TGTTTTTGTTGACTGCCTGCAGCCGCTCCCCTCCAG...GAAACACACATGGGTAGTGTGACCTGTTTGGATGTGATTACTTAAAAATGGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp GTAGGTGCTCAGAAGGATCAAGAATGGACACTAAATAACACTTCATGCCCAACTTGCATTCTGGCTTCTTaGTACCACTGTGTGTACTCC +
Preference number: 4 (lower is better)
Translates to: VGAQKDQEWTLNNTSCPTCILAS*YHCVYS
Trigger: GGAGTACACACAGTGGTAGCAAGAAGCCAGAATGCA...AGTTGGGCATGAAGTGTTATTTAGTGTCCATTCTTGATCCTTCTGAGCACCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp GCTGTAGGTGCTCAGAAGGATCAAGAATGGACACTAAATAACACTTCATGCCCATCTCATACTTTGGATTaGCTTTCATCCGTCCACTCC +
Preference number: 4 (lower is better)
Translates to: AVGAQKDQEWTLNNTSCPSHTLD*LSSVHS
Trigger: GGAGTGGACGGATGAAAGGCAATCCAAAGTATGAGA...TGGGCATGAAGTGTTATTTAGTGTCCATTCTTGATCCTTCTGAGCACCTACAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp CACATGTCTCCAAGGCTCACCCAATTAATCCATTTTGTCAAAATCCTCAGAGGACCTCCGGAAGGCAACTaGTTCCTTCTTTTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: HMSPRLTQLIHFVKILRGPPEGN*FLLFFL
Trigger: AAGGAAGAAAAGAAGGAAGCAGTTGCCTTCCGGAGG...TCCTCTGAGGATTTTGACAAAATGGATTAATTGGGTGAGCCTTGGAGACATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp GACGCCTTCATTATAAAGTGGGAGTGTTTGTACTCTCAGTACCTAGTCACTTCTACTCACTCCAATCTTTaGTCCAATAGGACAGAGGGG +
Preference number: 4 (lower is better)
Translates to: DAFIIKWECLYSQYLVTSTHSNL*SNRTEG
Trigger: CCCCTCTGTCCTATTGGAGCAAAGATTGGAGTGAGT...AGAAGTGACTAGGTACTGAGAGTACAAACACTCCCACTTTATAATGAAGGCGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp TCATTTTGTGTCTGCAGGTGTTTCCCACATGTCTCCAAGGCTCACCCAATTAATGTTTCCAGCTGTAGGTaGTCAGAAGGATCAAGAATG +
Preference number: 4 (lower is better)
Translates to: SFCVCRCFPHVSKAHPINVSSCR*SEGSRM
Trigger: CATTCTTGATCCTTCTGAGCACCTACAGCTGGAAAC...ATTAATTGGGTGAGCCTTGGAGACATGTGGGAAACACCTGCAGACACAAAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp CATCTCCACCAAAACCAATATTTTGACTTATGGTGCCTTTGCTGCTGTCAGCTCGTTTCCAGCTGTAGGTaGTCAGAAGGATCAAGAATG +
Preference number: 4 (lower is better)
Translates to: HLHQNQYFDLWCLCCCQLVSSCR*SEGSRM
Trigger: CATTCTTGATCCTTCTGAGCACCTACAGCTGGAAAC...GAGCTGACAGCAGCAAAGGCACCATAAGTCAAAATATTGGTTTTGGTGGAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp GTAGGTGCTCAGAAGGATCAAGAATGGACACTAAATAACACTTCATGCCCAACTGAAGCCCTGGTTTCTTaGCTGAGACTCTTTGCAAGT +
Preference number: 4 (lower is better)
Translates to: VGAQKDQEWTLNNTSCPTEALVS*LRLFAS
Trigger: ACTTGCAAAGAGTCTCAGGCAAGAAACCAGGGCTTC...AGTTGGGCATGAAGTGTTATTTAGTGTCCATTCTTGATCCTTCTGAGCACCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp GAGAGCCTTCAGTTTCAACTCGGAACTTTTAAAGGTCATGATTCAGCTGATCCTGAAGCCCTGGTTTCTTaGCTGAGACTCTTTGCAAGT +
Preference number: 4 (lower is better)
Translates to: ESLQFQLGTFKGHDSADPEALVS*LRLFAS
Trigger: ACTTGCAAAGAGTCTCAGGCAAGAAACCAGGGCTTC...AGGATCAGCTGAATCATGACCTTTAAAAGTTCCGAGTTGAAACTGAAGGCTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp TTGCTGCATTGCCCTGTTATGCTGATTCCCACATCTTGTAGGTCTCTGGGATCATTCCTTGAATCGTTATaGTTTTGCATAGCCATCCTC +
Preference number: 4 (lower is better)
Translates to: LLHCPVMLIPTSCRSLGSFLESL*FCIAIL
Trigger: GAGGATGGCTATGCAAAAGCATAACGATTCAAGGAA...TGATCCCAGAGACCTACAAGATGTGGGAATCAGCATAACAGGGCAATGCAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp CTACTGATGGGAGAGTTCCAGTTGAACATCGCAGAAAGAAACCCTCACTTGACATTATGGTGCCTTTGCTaGTGTCAGCTCAAAAACTAC +
Preference number: 4 (lower is better)
Translates to: LLMGEFQLNIAERNPHLTLWCLC*CQLKNY
Trigger: GTAGTTTTTGAGCTGACAGCAGCAAAGGCACCATAA...TGTCAAGTGAGGGTTTCTTTCTGCGATGTTCAACTGGAACTCTCCCATCAGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp CAAAAACTACCTGTACTTTGTTTCCTTGAATCGTTATGCTTTTGCATAGCCATCGTCACCTTCTGGACTTaGAGGCTTGAGACCCTTGGG +
Preference number: 4 (lower is better)
Translates to: QKLPVLCFLESLCFCIAIVTFWT*RLETLG
Trigger: CCCAAGGGTCTCAAGCCTGCAAGTCCAGAAGGTGAC...GATGGCTATGCAAAAGCATAACGATTCAAGGAAACAAAGTACAGGTAGTTTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp GAGAGCCTTCAGTTTCAACTCGGAACTTTTAAAGGTCATGATTCAGCTGATCCTAAGCTTAACTCCCAGTaGTCCTGGGTTTGTCACCTT +
Preference number: 4 (lower is better)
Translates to: ESLQFQLGTFKGHDSADPKLNSQ*SWVCHL
Trigger: AAGGTGACAAACCCAGGAGCACTGGGAGTTAAGCTT...AGGATCAGCTGAATCATGACCTTTAAAAGTTCCGAGTTGAAACTGAAGGCTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp ATCGTTATGCTTTTGCATAGCCATCCTCTAGCAGTTTTATCAAAGCAGGACATAGCTCTGACTCACTTCTaGTTTCCTCAGTGGCTACGG +
Preference number: 4 (lower is better)
Translates to: IVMLLHSHPLAVLSKQDIALTHF*FPQWLR
Trigger: CCGTAGCCACTGAGGAAACCAGAAGTGAGTCAGAGC...TATGTCCTGCTTTGATAAAACTGCTAGAGGATGGCTATGCAAAAGCATAACGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp TCTGGGATCATTTCTGTAACAAACATTAGGCCCTTGGTTAGAAACATAGCTCTCTCCTGTTTTGTGCTCTaGAGAGCCTGTGTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: SGIISVTNIRPLVRNIALSCFVL*RACVFC
Trigger: GCAGAAGACACAGGCTCTCCAGAGCACAAAACAGGA...GAGAGCTATGTTTCTAACCAAGGGCCTAATGTTTGTTACAGAAATGATCCCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp TCTCAGTCAGAATGCAGGACCAGTATCTGCTTAGTTTCCAGCTGTAGGTGCTCAATAAAATCCTGTTGGTaGCAACACTCACTCCAATCT +
Preference number: 4 (lower is better)
Translates to: SQSECRTSICLVSSCRCSIKSCW*QHSLQS
Trigger: AGATTGGAGTGAGTGTTGCCACCAACAGGATTTTAT...TGAGCACCTACAGCTGGAAACTAAGCAGATACTGGTCCTGCATTCTGACTGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp TTGCTGCATTGCCCTGTTATGCTGATTCCCACATCTTGTAGGTCTCTGGGATCACAATATTTTGACTTATaGTGCCTTTGCTGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: LLHCPVMLIPTSCRSLGSQYFDL*CLCCCQ
Trigger: CTGACAGCAGCAAAGGCACCATAAGTCAAAATATTG...TGATCCCAGAGACCTACAAGATGTGGGAATCAGCATAACAGGGCAATGCAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp CAAAAACTACCTGTACTTTGTTTCCTTGAATCGTTATGCTTTTGCATAGCCATCAGCCAGGCTGTGTGCTaGACATCAAGGCTCTTCCCT +
Preference number: 4 (lower is better)
Translates to: QKLPVLCFLESLCFCIAISQAVC*TSRLFP
Trigger: AGGGAAGAGCCTTGATGTCCAGCACACAGCCTGGCT...GATGGCTATGCAAAAGCATAACGATTCAAGGAAACAAAGTACAGGTAGTTTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
3UTR CAA 72 bp CCAACTGCACTGACTATCATGGGCCTGACTGCCAATTaGATCTATCCTCATAAAGAAGACACAATCTCAGTC +
Preference number: 4 (lower is better)
Translates to: PTALTIMGLTAN*IYPHKEDTISV
Trigger: GACTGAGATTGTGTCTTCTTTATGAGGATAGATCAAATTGGCAGTCAGGCCCATGATAGTCAGTGCAGTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR TCA 90 bp TTGCTCTGTCCAGGCTCACTAAGGACCCTGAACTCAGTTAAAATACTTAGAAATACTTTCCAGCAATGGTaGAGAAGACAAGTGGTCCCT +
Preference number: 4 (lower is better)
Translates to: LLCPGSLRTLNSVKILRNTFQQW*RRQVVP
Trigger: AGGGACCACTTGTCTTCTTCACCATTGCTGGAAAGT...ATTTCTAAGTATTTTAACTGAGTTCAGGGTCCTTAGTGAGCCTGGACAGAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR TCA 90 bp GAGAGCCTTCAGTTTCAACTCGGAACTTTTAAAGGTCATGATTCAGCTGATCCTCTGGTGATGCTGAATTaGAGTCCAGGGCCAAATAAT +
Preference number: 4 (lower is better)
Translates to: ESLQFQLGTFKGHDSADPLVMLN*SPGPNN
Trigger: ATTATTTGGCCCTGGACTTCAATTCAGCATCACCAG...AGGATCAGCTGAATCATGACCTTTAAAAGTTCCGAGTTGAAACTGAAGGCTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR TCA 90 bp CACATGTCTCCAAGGCTCACCCAATTAATCCATTTTGTCAAAATCCTCAGAGGACTGGTGATGCTGAATTaGAGTCCAGGGCCAAATAAT +
Preference number: 4 (lower is better)
Translates to: HMSPRLTQLIHFVKILRGLVMLN*SPGPNN
Trigger: ATTATTTGGCCCTGGACTTCAATTCAGCATCACCAG...TCCTCTGAGGATTTTGACAAAATGGATTAATTGGGTGAGCCTTGGAGACATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR TCA 90 bp TCTCAGTCAGAATGCAGGACCAGTATCTGCTTAGTTTCCAGCTGTAGGTGCTCAATTTATCATTCTCATTaGAGCACAGGAGAGAAGTCA +
Preference number: 4 (lower is better)
Translates to: SQSECRTSICLVSSCRCSIYHSH*STGEKS
Trigger: TGACTTCTCTCCTGTGCTTCAATGAGAATGATAAAT...TGAGCACCTACAGCTGGAAACTAAGCAGATACTGGTCCTGCATTCTGACTGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR TCA 90 bp TTGCTCTGTCCAGGCTCACTAAGGACCCTGAACTCAGTTAAAATACTTAGAAATTATGAGGTAGAGGAATaGGCTTGCAATTGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: LLCPGSLRTLNSVKILRNYEVEE*ACNWQP
Trigger: AGGCTGCCAATTGCAAGCTCATTCCTCTACCTCATA...ATTTCTAAGTATTTTAACTGAGTTCAGGGTCCTTAGTGAGCCTGGACAGAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR TCA 90 bp CACATGTCTCCAAGGCTCACCCAATTAATCCATTTTGTCAAAATCCTCAGAGGAGAAAGGGAGACAGGATaGCTACTCATTTTGTGTCTG +
Preference number: 4 (lower is better)
Translates to: HMSPRLTQLIHFVKILRGERETG*LLILCL
Trigger: CAGACACAAAATGAGTAGTCATCCTGTCTCCCTTTC...TCCTCTGAGGATTTTGACAAAATGGATTAATTGGGTGAGCCTTGGAGACATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR TCA 90 bp GTAGGTGCTCAGAAGGATCAAGAATGGACACTAAATAACACTTCATGCCCAACTGAAAGGGAGACAGGATaGCTACTCATTTTGTGTCTG +
Preference number: 4 (lower is better)
Translates to: VGAQKDQEWTLNNTSCPTERETG*LLILCL
Trigger: CAGACACAAAATGAGTAGTCATCCTGTCTCCCTTTC...AGTTGGGCATGAAGTGTTATTTAGTGTCCATTCTTGATCCTTCTGAGCACCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR TCA 90 bp GACGCCTTCATTATAAAGTGGGAGTGTTTGTACTCTCAGTACCTAGTCACTTCTGGTGATTGGAAACCCTaGAATCCTGTAGCAAAGTCT +
Preference number: 4 (lower is better)
Translates to: DAFIIKWECLYSQYLVTSGDWKP*NPVAKS
Trigger: AGACTTTGCTACAGGATTTCAGGGTTTCCAATCACC...AGAAGTGACTAGGTACTGAGAGTACAAACACTCCCACTTTATAATGAAGGCGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR TCA 90 bp ATCGTTATGCTTTTGCATAGCCATCCTCTAGCAGTTTTATCAAAGCAGGACATACACTTACCTGTGGGGTaGTTGGAAACCCTGAAATCC +
Preference number: 4 (lower is better)
Translates to: IVMLLHSHPLAVLSKQDIHLPVG*LETLKS
Trigger: GGATTTCAGGGTTTCCAATCACCCCACAGGTAAGTG...TATGTCCTGCTTTGATAAAACTGCTAGAGGATGGCTATGCAAAAGCATAACGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR TCA 90 bp GTAGGTGCTCAGAAGGATCAAGAATGGACACTAAATAACACTTCATGCCCAACTATCTGGTGTGGTTCTTaGCACTTGGGCCTACAATTT +
Preference number: 4 (lower is better)
Translates to: VGAQKDQEWTLNNTSCPTIWCGS*HLGLQF
Trigger: AAATTGTAGGCCCAAGTGTCAAGAACCACACCAGAT...AGTTGGGCATGAAGTGTTATTTAGTGTCCATTCTTGATCCTTCTGAGCACCTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR TCA 90 bp GCTCTCTCTCACACACACACATCGATCATCTCCACCAAAACCAATATTTTGACTATCTGGTGTGGTTCTTaGCACTTGGGCCTACAATTT +
Preference number: 4 (lower is better)
Translates to: ALSHTHTSIISTKTNILTIWCGS*HLGLQF
Trigger: AAATTGTAGGCCCAAGTGTCAAGAACCACACCAGAT...AGTCAAAATATTGGTTTTGGTGGAGATGATCGATGTGTGTGTGTGAGAGAGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR TCA 90 bp AACGATAAAATCCTGTTGGTGGCAACACTCACTCCAATCTTTGCTCCAATAGGAATTGCCCTGTTATGCTaGTTCCCACATCTTGTAGGT +
Preference number: 4 (lower is better)
Translates to: NDKILLVATLTPIFAPIGIALLC*FPHLVG
Trigger: ACCTACAAGATGTGGGAATCAGCATAACAGGGCAAT...TCCTATTGGAGCAAAGATTGGAGTGAGTGTTGCCACCAACAGGATTTTATCGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp CATCCTCTAGCAGTTTTATCAAAGCAGGACATAATTGCCTACACTCTGGAAATGCTGTGCACCCACACCTaGATTTCTTGCTCAGTTTTG +
Preference number: 4 (lower is better)
Translates to: HPLAVLSKQDIIAYTLEMLCTHT*ISCSVL
Trigger: CAAAACTGAGCAAGAAATGCAGGTGTGGGTGCACAG...CATTTCCAGAGTGTAGGCAATTATGTCCTGCTTTGATAAAACTGCTAGAGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp CATCCTCTAGCAGTTTTATCAAAGCAGGACATAATTGCCTACACTCTGGAAATGTGCATTCTGGCTTCTTaGTACCACTGTGTGTACTCC +
Preference number: 4 (lower is better)
Translates to: HPLAVLSKQDIIAYTLEMCILAS*YHCVYS
Trigger: GGAGTACACACAGTGGTAGCAAGAAGCCAGAATGCA...CATTTCCAGAGTGTAGGCAATTATGTCCTGCTTTGATAAAACTGCTAGAGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp AAAAGAAGACTTTGGCATTCACTTACCTGTGGGGTGATTGGAAACCCTGAAATCTTCTTGGAACCAGAGTaGATTCTGGCTTCTTGCTAC +
Preference number: 4 (lower is better)
Translates to: KRRLWHSLTCGVIGNPEIFLEPE*ILASCY
Trigger: GTAGCAAGAAGCCAGAATGCACTCTGGTTCCAAGAA...GATTTCAGGGTTTCCAATCACCCCACAGGTAAGTGAATGCCAAAGTCTTCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp ATCGTTATGCTTTTGCATAGCCATCCTCTAGCAGTTTTATCAAAGCAGGACATATCCACTCCTGTTTTGTaGTCTGGAGAGCCTGTGTCT +
Preference number: 4 (lower is better)
Translates to: IVMLLHSHPLAVLSKQDISTPVL*SGEPVS
Trigger: AGACACAGGCTCTCCAGAGCACAAAACAGGAGTGGA...TATGTCCTGCTTTGATAAAACTGCTAGAGGATGGCTATGCAAAAGCATAACGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp TCTGGGATCATTTCTGTAACAAACATTAGGCCCTTGGTTAGAAACATAGCTCTCCCTCCGGAAGGCAACTaGTTCCTTCTTTTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: SGIISVTNIRPLVRNIALPPEGN*FLLFFL
Trigger: AAGGAAGAAAAGAAGGAAGCAGTTGCCTTCCGGAGG...GAGAGCTATGTTTCTAACCAAGGGCCTAATGTTTGTTACAGAAATGATCCCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp CATCTCCACCAAAACCAATATTTTGACTTATGGTGCCTTTGCTGCTGTCAGCTCTACTCATTTTGTGTCTaGAGGTGTTTCCCACATGTC +
Preference number: 4 (lower is better)
Translates to: HLHQNQYFDLWCLCCCQLYSFCV*RCFPHV
Trigger: GACATGTGGGAAACACCTGCAGACACAAAATGAGTA...GAGCTGACAGCAGCAAAGGCACCATAAGTCAAAATATTGGTTTTGGTGGAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp AACGATAAAATCCTGTTGGTGGCAACACTCACTCCAATCTTTGCTCCAATAGGAGTTTCCAGCTGTAGGTaGTCAGAAGGATCAAGAATG +
Preference number: 4 (lower is better)
Translates to: NDKILLVATLTPIFAPIGVSSCR*SEGSRM
Trigger: CATTCTTGATCCTTCTGAGCACCTACAGCTGGAAAC...TCCTATTGGAGCAAAGATTGGAGTGAGTGTTGCCACCAACAGGATTTTATCGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp TCATTTTGTGTCTGCAGGTGTTTCCCACATGTCTCCAAGGCTCACCCAATTAATCAATCTCAGTCAGAATaGAGGACCAGTATCTGCTTA +
Preference number: 4 (lower is better)
Translates to: SFCVCRCFPHVSKAHPINQSQSE*RTSICL
Trigger: TAAGCAGATACTGGTCCTGCATTCTGACTGAGATTG...ATTAATTGGGTGAGCCTTGGAGACATGTGGGAAACACCTGCAGACACAAAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp AGGAAAAAGCCAGGTCTGAGGAGAGCCTTCAGTTTCAACTCGGAACTTTTAAAGTATCATGGGCCTGACTaGCAATTTGATCTATCCTCA +
Preference number: 4 (lower is better)
Translates to: RKKPGLRRAFSFNSELLKYHGPD*QFDLSS
Trigger: TGAGGATAGATCAAATTGGCAGTCAGGCCCATGATA...CTTTAAAAGTTCCGAGTTGAAACTGAAGGCTCTCCTCAGACCTGGCTTTTTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp GTAGGTGCTCAGAAGGATCAAGAATGGACACTAAATAACACTTCATGCCCAACTAGCAAAGTCTACAACTaGCCCAACTGCACTGACTAT +
Preference number: 4 (lower is better)
Translates to: VGAQKDQEWTLNNTSCPTSKVYN*PNCTDY
Trigger: ATAGTCAGTGCAGTTGGGGCAGTTGTAGACTTTGCT...AGTTGGGCATGAAGTGTTATTTAGTGTCCATTCTTGATCCTTCTGAGCACCTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp GGTGTTTCCCACATGTCTCCAAGGCTCACCCAATTAATCCATTTTGTCAAAATCAGCAAAGTCTACAACTaGCCCAACTGCACTGACTAT +
Preference number: 4 (lower is better)
Translates to: GVSHMSPRLTQLIHFVKISKVYN*PNCTDY
Trigger: ATAGTCAGTGCAGTTGGGGCAGTTGTAGACTTTGCT...GATTTTGACAAAATGGATTAATTGGGTGAGCCTTGGAGACATGTGGGAAACACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp CACATGTCTCCAAGGCTCACCCAATTAATCCATTTTGTCAAAATCCTCAGAGGATTGCCTGAGACTCTTTaGAAGTCACATGGGGAAGAA +
Preference number: 4 (lower is better)
Translates to: HMSPRLTQLIHFVKILRGLPETL*KSHGEE
Trigger: TTCTTCCCCATGTGACTTGCAAAGAGTCTCAGGCAA...TCCTCTGAGGATTTTGACAAAATGGATTAATTGGGTGAGCCTTGGAGACATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp CTACTGATGGGAGAGTTCCAGTTGAACATCGCAGAAAGAAACCCTCACTTGACAAAAGCAGGACATAATTaGCTACACTCTGGAAATGAG +
Preference number: 4 (lower is better)
Translates to: LLMGEFQLNIAERNPHLTKAGHN*LHSGNE
Trigger: CTCATTTCCAGAGTGTAGGCAATTATGTCCTGCTTT...TGTCAAGTGAGGGTTTCTTTCTGCGATGTTCAACTGGAACTCTCCCATCAGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp GCTGTAGGTGCTCAGAAGGATCAAGAATGGACACTAAATAACACTTCATGCCCATTTCTTGCTCAGTTTTaGCCACCAGGTAGAATGTAC +
Preference number: 4 (lower is better)
Translates to: AVGAQKDQEWTLNNTSCPFLAQF*PPGRMY
Trigger: GTACATTCTACCTGGTGGCCAAAACTGAGCAAGAAA...TGGGCATGAAGTGTTATTTAGTGTCCATTCTTGATCCTTCTGAGCACCTACAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp TCAGAATTTCAGGTATTGGAGTCAAACGATAAAATCCTGTTGGTGGCAACACTCAGCTATCACATCTGGTaGGTAGACTGGTATGGTGCA +
Preference number: 4 (lower is better)
Translates to: SEFQVLESNDKILLVATLSYHIW*VDWYGA
Trigger: TGCACCATACCAGTCTACCCACCAGATGTGATAGCT...GAGTGTTGCCACCAACAGGATTTTATCGTTTGACTCCAATACCTGAAATTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp CTACTCATTTTGTGTCTGCAGGTGTTTCCCACATGTCTCCAAGGCTCACCCAATTATCTACCTGAATGGTaGAACTTAAGGAACTTTCCA +
Preference number: 4 (lower is better)
Translates to: LLILCLQVFPTCLQGSPNYLPEW*NLRNFP
Trigger: TGGAAAGTTCCTTAAGTTCCACCATTCAGGTAGATA...ATTGGGTGAGCCTTGGAGACATGTGGGAAACACCTGCAGACACAAAATGAGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp GGTGTTTCCCACATGTCTCCAAGGCTCACCCAATTAATCCATTTTGTCAAAATCCGGTGTCTTAAGGATTaGCCTTCTACATCAGCTTTC +
Preference number: 4 (lower is better)
Translates to: GVSHMSPRLTQLIHFVKIRCLKD*PSTSAF
Trigger: GAAAGCTGATGTAGAAGGCCAATCCTTAAGACACCG...GATTTTGACAAAATGGATTAATTGGGTGAGCCTTGGAGACATGTGGGAAACACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp TCTGGGATCATTTCTGTAACAAACATTAGGCCCTTGGTTAGAAACATAGCTCTCACTGTCTTCAGAGGCTaGAACAAGATGGTCTCCAGA +
Preference number: 4 (lower is better)
Translates to: SGIISVTNIRPLVRNIALTVFRG*NKMVSR
Trigger: TCTGGAGACCATCTTGTTCCAGCCTCTGAAGACAGT...GAGAGCTATGTTTCTAACCAAGGGCCTAATGTTTGTTACAGAAATGATCCCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp ATCGTTATGCTTTTGCATAGCCATCCTCTAGCAGTTTTATCAAAGCAGGACATATCTTTGCAAGTCACATaGGGAAGAAGGCAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: IVMLLHSHPLAVLSKQDISLQVT*GRRQLL
Trigger: GAGGAGCTGCCTTCTTCCCCATGTGACTTGCAAAGA...TATGTCCTGCTTTGATAAAACTGCTAGAGGATGGCTATGCAAAAGCATAACGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp AGGAAAAAGCCAGGTCTGAGGAGAGCCTTCAGTTTCAACTCGGAACTTTTAAAGTTTTCGGTGGGTCAATaGAGTGACATTTCACTACTG +
Preference number: 4 (lower is better)
Translates to: RKKPGLRRAFSFNSELLKFSVGQ*SDISLL
Trigger: CAGTAGTGAAATGTCACTCCATTGACCCACCGAAAA...CTTTAAAAGTTCCGAGTTGAAACTGAAGGCTCTCCTCAGACCTGGCTTTTTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR TCA 90 bp ATTCCATTTTTAAGTAATCACATCCAAACAGGTCACACTACCCATGTGTGTTTCGGCCGTGATTTCCTCTaGGGCTTGAGATCTCTATTC +
Preference number: 4 (lower is better)
Translates to: IPFLSNHIQTGHTTHVCFGRDFL*GLRSLF
Trigger: GAATAGAGATCTCAAGCCTCAGAGGAAATCACGGCC...GAAACACACATGGGTAGTGTGACCTGTTTGGATGTGATTACTTAAAAATGGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR TCA 90 bp CAAAAACTACCTGTACTTTGTTTCCTTGAATCGTTATGCTTTTGCATAGCCATCATGCATGTTCCCGGATaGTCGAGAGGTTTCTCAGGT +
Preference number: 4 (lower is better)
Translates to: QKLPVLCFLESLCFCIAIMHVPG*SRGFSG
Trigger: ACCTGAGAAACCTCTCGATCATCCGGGAACATGCAT...GATGGCTATGCAAAAGCATAACGATTCAAGGAAACAAAGTACAGGTAGTTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR TCA 90 bp GTAGGTGCTCAGAAGGATCAAGAATGGACACTAAATAACACTTCATGCCCAACTATTCTCTCTTGGTTTTaGCCTGTGTTGACCATCAGT +
Preference number: 4 (lower is better)
Translates to: VGAQKDQEWTLNNTSCPTILSWF*PVLTIS
Trigger: ACTGATGGTCAACACAGGTCAAAACCAAGAGAGAAT...AGTTGGGCATGAAGTGTTATTTAGTGTCCATTCTTGATCCTTCTGAGCACCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR TCA 90 bp GGTGTTTCCCACATGTCTCCAAGGCTCACCCAATTAATCCATTTTGTCAAAATCATTCTCTCTTGGTTTTaGCCTGTGTTGACCATCAGT +
Preference number: 4 (lower is better)
Translates to: GVSHMSPRLTQLIHFVKIILSWF*PVLTIS
Trigger: ACTGATGGTCAACACAGGTCAAAACCAAGAGAGAAT...GATTTTGACAAAATGGATTAATTGGGTGAGCCTTGGAGACATGTGGGAAACACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR TCA 90 bp TTTTTAAGTAATCACATCCAAACAGGTCACACTACCCATGTGTGTTTCTTCATGCACTTACCTGTGGGGTaGTTGGAAACCCTGAAATCC +
Preference number: 4 (lower is better)
Translates to: FLSNHIQTGHTTHVCFFMHLPVG*LETLKS
Trigger: GGATTTCAGGGTTTCCAATCACCCCACAGGTAAGTG...CATGAAGAAACACACATGGGTAGTGTGACCTGTTTGGATGTGATTACTTAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR TCA 90 bp CATCTCCACCAAAACCAATATTTTGACTTATGGTGCCTTTGCTGCTGTCAGCTCCAGAACCTGCTTCTTTaGAAATCAAAACGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: HLHQNQYFDLWCLCCCQLQNLLL*KSKRLL
Trigger: AAGAAGCCGTTTTGATTTTCAAAGAAGCAGGTTCTG...GAGCTGACAGCAGCAAAGGCACCATAAGTCAAAATATTGGTTTTGGTGGAGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR TCA 90 bp CAAAAACTACCTGTACTTTGTTTCCTTGAATCGTTATGCTTTTGCATAGCCATCCCCTGGTTTCTTGCCTaGGACTCTTTGCAAGTCACA +
Preference number: 4 (lower is better)
Translates to: QKLPVLCFLESLCFCIAIPWFLA*DSLQVT
Trigger: TGTGACTTGCAAAGAGTCTCAGGCAAGAAACCAGGG...GATGGCTATGCAAAAGCATAACGATTCAAGGAAACAAAGTACAGGTAGTTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR TCA 90 bp TCTGGGATCATTTCTGTAACAAACATTAGGCCCTTGGTTAGAAACATAGCTCTCGGTGGGTCAATGGAGTaGCATTTCACTACTGACATA +
Preference number: 4 (lower is better)
Translates to: SGIISVTNIRPLVRNIALGGSME*HFTTDI
Trigger: TATGTCAGTAGTGAAATGTCACTCCATTGACCCACC...GAGAGCTATGTTTCTAACCAAGGGCCTAATGTTTGTTACAGAAATGATCCCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR TCA 90 bp TCAGAATTTCAGGTATTGGAGTCAAACGATAAAATCCTGTTGGTGGCAACACTCATTGCCCTGTTATGCTaGTTCCCACATCTTGTAGGT +
Preference number: 4 (lower is better)
Translates to: SEFQVLESNDKILLVATLIALLC*FPHLVG
Trigger: ACCTACAAGATGTGGGAATCAGCATAACAGGGCAAT...GAGTGTTGCCACCAACAGGATTTTATCGTTTGACTCCAATACCTGAAATTCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR TCA 90 bp ATTCCATTTTTAAGTAATCACATCCAAACAGGTCACACTACCCATGTGTGTTTCATTCAGCTGATCCTGTaGAGTGGACTGTACAGTGGG +
Preference number: 4 (lower is better)
Translates to: IPFLSNHIQTGHTTHVCFIQLIL*SGLYSG
Trigger: CCCACTGTACAGTCCACTTCACAGGATCAGCTGAAT...GAAACACACATGGGTAGTGTGACCTGTTTGGATGTGATTACTTAAAAATGGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp ATTCCATTTTTAAGTAATCACATCCAAACAGGTCACACTACCCATGTGTGTTTCCACACCTGCATTTCTTaGTCAGTTTTGGCCACCAGG +
Preference number: 4 (lower is better)
Translates to: IPFLSNHIQTGHTTHVCFHTCIS*SVLATR
Trigger: CCTGGTGGCCAAAACTGAGCAAGAAATGCAGGTGTG...GAAACACACATGGGTAGTGTGACCTGTTTGGATGTGATTACTTAAAAATGGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp TCTGGGATCATTTCTGTAACAAACATTAGGCCCTTGGTTAGAAACATAGCTCTCTCTCATACTTTGGATTaGCTTTCATCCGTCCACTCC +
Preference number: 4 (lower is better)
Translates to: SGIISVTNIRPLVRNIALSHTLD*LSSVHS
Trigger: GGAGTGGACGGATGAAAGGCAATCCAAAGTATGAGA...GAGAGCTATGTTTCTAACCAAGGGCCTAATGTTTGTTACAGAAATGATCCCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp AACGATAAAATCCTGTTGGTGGCAACACTCACTCCAATCTTTGCTCCAATAGGATACTCATTTTGTGTCTaGAGGTGTTTCCCACATGTC +
Preference number: 4 (lower is better)
Translates to: NDKILLVATLTPIFAPIGYSFCV*RCFPHV
Trigger: GACATGTGGGAAACACCTGCAGACACAAAATGAGTA...TCCTATTGGAGCAAAGATTGGAGTGAGTGTTGCCACCAACAGGATTTTATCGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp GACGCCTTCATTATAAAGTGGGAGTGTTTGTACTCTCAGTACCTAGTCACTTCTTACTCATTTTGTGTCTaGAGGTGTTTCCCACATGTC +
Preference number: 4 (lower is better)
Translates to: DAFIIKWECLYSQYLVTSYSFCV*RCFPHV
Trigger: GACATGTGGGAAACACCTGCAGACACAAAATGAGTA...AGAAGTGACTAGGTACTGAGAGTACAAACACTCCCACTTTATAATGAAGGCGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp CATCCTCTAGCAGTTTTATCAAAGCAGGACATAATTGCCTACACTCTGGAAATGTTGCCTGAGACTCTTTaGAAGTCACATGGGGAAGAA +
Preference number: 4 (lower is better)
Translates to: HPLAVLSKQDIIAYTLEMLPETL*KSHGEE
Trigger: TTCTTCCCCATGTGACTTGCAAAGAGTCTCAGGCAA...CATTTCCAGAGTGTAGGCAATTATGTCCTGCTTTGATAAAACTGCTAGAGGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp AGGAAAAAGCCAGGTCTGAGGAGAGCCTTCAGTTTCAACTCGGAACTTTTAAAGTTCCTTGAATCGTTATaGTTTTGCATAGCCATCCTC +
Preference number: 4 (lower is better)
Translates to: RKKPGLRRAFSFNSELLKFLESL*FCIAIL
Trigger: GAGGATGGCTATGCAAAAGCATAACGATTCAAGGAA...CTTTAAAAGTTCCGAGTTGAAACTGAAGGCTCTCCTCAGACCTGGCTTTTTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp CACATGTCTCCAAGGCTCACCCAATTAATCCATTTTGTCAAAATCCTCAGAGGATTCCAGTCTCGCAGTTaGACAAAACCAGATAATCTG +
Preference number: 4 (lower is better)
Translates to: HMSPRLTQLIHFVKILRGFQSRS*TKPDNL
Trigger: CAGATTATCTGGTTTTGTCCAACTGCGAGACTGGAA...TCCTCTGAGGATTTTGACAAAATGGATTAATTGGGTGAGCCTTGGAGACATGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp GTAGGTGCTCAGAAGGATCAAGAATGGACACTAAATAACACTTCATGCCCAACTTTCCAGTCTCGCAGTTaGACAAAACCAGATAATCTG +
Preference number: 4 (lower is better)
Translates to: VGAQKDQEWTLNNTSCPTFQSRS*TKPDNL
Trigger: CAGATTATCTGGTTTTGTCCAACTGCGAGACTGGAA...AGTTGGGCATGAAGTGTTATTTAGTGTCCATTCTTGATCCTTCTGAGCACCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp ATCGTTATGCTTTTGCATAGCCATCCTCTAGCAGTTTTATCAAAGCAGGACATAAGCTATCACATCTGGTaGGTAGACTGGTATGGTGCA +
Preference number: 4 (lower is better)
Translates to: IVMLLHSHPLAVLSKQDISYHIW*VDWYGA
Trigger: TGCACCATACCAGTCTACCCACCAGATGTGATAGCT...TATGTCCTGCTTTGATAAAACTGCTAGAGGATGGCTATGCAAAAGCATAACGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp ATTCCATTTTTAAGTAATCACATCCAAACAGGTCACACTACCCATGTGTGTTTCCAAGTGGTCCCTGGGTaGCCCATTGATTTCTCTACT +
Preference number: 4 (lower is better)
Translates to: IPFLSNHIQTGHTTHVCFQVVPG*PIDFST
Trigger: AGTAGAGAAATCAATGGGCCACCCAGGGACCACTTG...GAAACACACATGGGTAGTGTGACCTGTTTGGATGTGATTACTTAAAAATGGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp TCAGAATTTCAGGTATTGGAGTCAAACGATAAAATCCTGTTGGTGGCAACACTCCGGTGTCTTAAGGATTaGCCTTCTACATCAGCTTTC +
Preference number: 4 (lower is better)
Translates to: SEFQVLESNDKILLVATLRCLKD*PSTSAF
Trigger: GAAAGCTGATGTAGAAGGCCAATCCTTAAGACACCG...GAGTGTTGCCACCAACAGGATTTTATCGTTTGACTCCAATACCTGAAATTCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp GACGCCTTCATTATAAAGTGGGAGTGTTTGTACTCTCAGTACCTAGTCACTTCTACGATAAAATCCTGTTaGTGGCAACACTCACTCCAA +
Preference number: 4 (lower is better)
Translates to: DAFIIKWECLYSQYLVTSTIKSC*WQHSLQ
Trigger: TTGGAGTGAGTGTTGCCACCAACAGGATTTTATCGT...AGAAGTGACTAGGTACTGAGAGTACAAACACTCCCACTTTATAATGAAGGCGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp GGTGTTTCCCACATGTCTCCAAGGCTCACCCAATTAATCCATTTTGTCAAAATCACGATAAAATCCTGTTaGTGGCAACACTCACTCCAA +
Preference number: 4 (lower is better)
Translates to: GVSHMSPRLTQLIHFVKITIKSC*WQHSLQ
Trigger: TTGGAGTGAGTGTTGCCACCAACAGGATTTTATCGT...GATTTTGACAAAATGGATTAATTGGGTGAGCCTTGGAGACATGTGGGAAACACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp TTGCTCTGTCCAGGCTCACTAAGGACCCTGAACTCAGTTAAAATACTTAGAAATCTCTATTCTCTAAGCTaGACTCTGGGTCTTGGCTTT +
Preference number: 4 (lower is better)
Translates to: LLCPGSLRTLNSVKILRNLYSLS*TLGLGF
Trigger: AAAGCCAAGACCCAGAGTCCAGCTTAGAGAATAGAG...ATTTCTAAGTATTTTAACTGAGTTCAGGGTCCTTAGTGAGCCTGGACAGAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp TCATTTTGTGTCTGCAGGTGTTTCCCACATGTCTCCAAGGCTCACCCAATTAATCAATATTTTGACTTATaGTGCCTTTGCTGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: SFCVCRCFPHVSKAHPINQYFDL*CLCCCQ
Trigger: CTGACAGCAGCAAAGGCACCATAAGTCAAAATATTG...ATTAATTGGGTGAGCCTTGGAGACATGTGGGAAACACCTGCAGACACAAAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp CAAAAACTACCTGTACTTTGTTTCCTTGAATCGTTATGCTTTTGCATAGCCATCGCTGATCCTGTGAAGTaGACTGTACAGTGGGTAGGT +
Preference number: 4 (lower is better)
Translates to: QKLPVLCFLESLCFCIAIADPVK*TVQWVG
Trigger: ACCTACCCACTGTACAGTCCACTTCACAGGATCAGC...GATGGCTATGCAAAAGCATAACGATTCAAGGAAACAAAGTACAGGTAGTTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
3UTR CAA 72 bp GTTCTGGCCAAGACCTTGAAAACTACACATTCTCTCTaGGTTTTGACCTGTGTTGACCATCAGTGTGTTTTT +
Preference number: 4 (lower is better)
Translates to: VLAKTLKTTHSL*VLTCVDHQCVF
Trigger: AAAAACACACTGATGGTCAACACAGGTCAAAACCAAGAGAGAATGTGTAGTTTTCAAGGTCTTGGCCAGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR TCA 90 bp ATTCCATTTTTAAGTAATCACATCCAAACAGGTCACACTACCCATGTGTGTTTCAAGGAAGAGAAGCTCTaGCTCACTTCTGGTTTCCTC +
Preference number: 4 (lower is better)
Translates to: IPFLSNHIQTGHTTHVCFKEEKL*LTSGFL
Trigger: GAGGAAACCAGAAGTGAGTCAGAGCTTCTCTTCCTT...GAAACACACATGGGTAGTGTGACCTGTTTGGATGTGATTACTTAAAAATGGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR TCA 90 bp CAAAAACTACCTGTACTTTGTTTCCTTGAATCGTTATGCTTTTGCATAGCCATCATTTCCTCTGAGGCTTaGGATCTCTATTCACTGGGG +
Preference number: 4 (lower is better)
Translates to: QKLPVLCFLESLCFCIAIISSEA*DLYSLG
Trigger: CCCCAGTGAATAGAGATCTCAAGCCTCAGAGGAAAT...GATGGCTATGCAAAAGCATAACGATTCAAGGAAACAAAGTACAGGTAGTTTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR TCA 90 bp CATCCTCTAGCAGTTTTATCAAAGCAGGACATAATTGCCTACACTCTGGAAATGTTCTGGCCAAGACCTTaGAAACTACACATTCTCTCT +
Preference number: 4 (lower is better)
Translates to: HPLAVLSKQDIIAYTLEMFWPRP*KLHILS
Trigger: AGAGAGAATGTGTAGTTTTCAAGGTCTTGGCCAGAA...CATTTCCAGAGTGTAGGCAATTATGTCCTGCTTTGATAAAACTGCTAGAGGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR TCA 90 bp TCATTTTGTGTCTGCAGGTGTTTCCCACATGTCTCCAAGGCTCACCCAATTAATATTTATCATTCTCATTaGAGCACAGGAGAGAAGTCA +
Preference number: 4 (lower is better)
Translates to: SFCVCRCFPHVSKAHPINIYHSH*STGEKS
Trigger: TGACTTCTCTCCTGTGCTTCAATGAGAATGATAAAT...ATTAATTGGGTGAGCCTTGGAGACATGTGGGAAACACCTGCAGACACAAAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR TCA 90 bp GCTGTAGGTGCTCAGAAGGATCAAGAATGGACACTAAATAACACTTCATGCCCAATTTATCATTCTCATTaGAGCACAGGAGAGAAGTCA +
Preference number: 4 (lower is better)
Translates to: AVGAQKDQEWTLNNTSCPIYHSH*STGEKS
Trigger: TGACTTCTCTCCTGTGCTTCAATGAGAATGATAAAT...TGGGCATGAAGTGTTATTTAGTGTCCATTCTTGATCCTTCTGAGCACCTACAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR TCA 90 bp CACATGTCTCCAAGGCTCACCCAATTAATCCATTTTGTCAAAATCCTCAGAGGACAGAACCTGCTTCTTTaGAAATCAAAACGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: HMSPRLTQLIHFVKILRGQNLLL*KSKRLL
Trigger: AAGAAGCCGTTTTGATTTTCAAAGAAGCAGGTTCTG...TCCTCTGAGGATTTTGACAAAATGGATTAATTGGGTGAGCCTTGGAGACATGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR TCA 90 bp TTTTTAAGTAATCACATCCAAACAGGTCACACTACCCATGTGTGTTTCTTCATGCCTACACTCTGGAAATaGGGGGTGAGTCACCTTTTT +
Preference number: 4 (lower is better)
Translates to: FLSNHIQTGHTTHVCFFMPTLWK*GVSHLF
Trigger: AAAAAGGTGACTCACCCCTCATTTCCAGAGTGTAGG...CATGAAGAAACACACATGGGTAGTGTGACCTGTTTGGATGTGATTACTTAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp ATTCCATTTTTAAGTAATCACATCCAAACAGGTCACACTACCCATGTGTGTTTCCTGTGCACCCACACCTaGATTTCTTGCTCAGTTTTG +
Preference number: 4 (lower is better)
Translates to: IPFLSNHIQTGHTTHVCFLCTHT*ISCSVL
Trigger: CAAAACTGAGCAAGAAATGCAGGTGTGGGTGCACAG...GAAACACACATGGGTAGTGTGACCTGTTTGGATGTGATTACTTAAAAATGGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp TTTTTAAGTAATCACATCCAAACAGGTCACACTACCCATGTGTGTTTCTTCATGCCTCCGGAAGGCAACTaGTTCCTTCTTTTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: FLSNHIQTGHTTHVCFFMPPEGN*FLLFFL
Trigger: AAGGAAGAAAAGAAGGAAGCAGTTGCCTTCCGGAGG...CATGAAGAAACACACATGGGTAGTGTGACCTGTTTGGATGTGATTACTTAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp TTTTTAAGTAATCACATCCAAACAGGTCACACTACCCATGTGTGTTTCTTCATGACTCACTCCAATCTTTaGTCCAATAGGACAGAGGGG +
Preference number: 4 (lower is better)
Translates to: FLSNHIQTGHTTHVCFFMTHSNL*SNRTEG
Trigger: CCCCTCTGTCCTATTGGAGCAAAGATTGGAGTGAGT...CATGAAGAAACACACATGGGTAGTGTGACCTGTTTGGATGTGATTACTTAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp TCAGAATTTCAGGTATTGGAGTCAAACGATAAAATCCTGTTGGTGGCAACACTCCAATCTCAGTCAGAATaGAGGACCAGTATCTGCTTA +
Preference number: 4 (lower is better)
Translates to: SEFQVLESNDKILLVATLQSQSE*RTSICL
Trigger: TAAGCAGATACTGGTCCTGCATTCTGACTGAGATTG...GAGTGTTGCCACCAACAGGATTTTATCGTTTGACTCCAATACCTGAAATTCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp TTGCTCTGTCCAGGCTCACTAAGGACCCTGAACTCAGTTAAAATACTTAGAAATCAATCTCAGTCAGAATaGAGGACCAGTATCTGCTTA +
Preference number: 4 (lower is better)
Translates to: LLCPGSLRTLNSVKILRNQSQSE*RTSICL
Trigger: TAAGCAGATACTGGTCCTGCATTCTGACTGAGATTG...ATTTCTAAGTATTTTAACTGAGTTCAGGGTCCTTAGTGAGCCTGGACAGAGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp CATCCTCTAGCAGTTTTATCAAAGCAGGACATAATTGCCTACACTCTGGAAATGTTTCTTGCTCAGTTTTaGCCACCAGGTAGAATGTAC +
Preference number: 4 (lower is better)
Translates to: HPLAVLSKQDIIAYTLEMFLAQF*PPGRMY
Trigger: GTACATTCTACCTGGTGGCCAAAACTGAGCAAGAAA...CATTTCCAGAGTGTAGGCAATTATGTCCTGCTTTGATAAAACTGCTAGAGGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp AGGAAAAAGCCAGGTCTGAGGAGAGCCTTCAGTTTCAACTCGGAACTTTTAAAGTATCTACCTGAATGGTaGAACTTAAGGAACTTTCCA +
Preference number: 4 (lower is better)
Translates to: RKKPGLRRAFSFNSELLKYLPEW*NLRNFP
Trigger: TGGAAAGTTCCTTAAGTTCCACCATTCAGGTAGATA...CTTTAAAAGTTCCGAGTTGAAACTGAAGGCTCTCCTCAGACCTGGCTTTTTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp TTTTTAAGTAATCACATCCAAACAGGTCACACTACCCATGTGTGTTTCTTCATGGAGGGAGATTCTTCTTaGAACCAGAGTGCATTCTGG +
Preference number: 4 (lower is better)
Translates to: FLSNHIQTGHTTHVCFFMEGDSS*NQSAFW
Trigger: CCAGAATGCACTCTGGTTCCAAGAAGAATCTCCCTC...CATGAAGAAACACACATGGGTAGTGTGACCTGTTTGGATGTGATTACTTAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp TCAGAATTTCAGGTATTGGAGTCAAACGATAAAATCCTGTTGGTGGCAACACTCACGATAAAATCCTGTTaGTGGCAACACTCACTCCAA +
Preference number: 4 (lower is better)
Translates to: SEFQVLESNDKILLVATLTIKSC*WQHSLQ
Trigger: TTGGAGTGAGTGTTGCCACCAACAGGATTTTATCGT...GAGTGTTGCCACCAACAGGATTTTATCGTTTGACTCCAATACCTGAAATTCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp ATTCCATTTTTAAGTAATCACATCCAAACAGGTCACACTACCCATGTGTGTTTCGCAGAAGGGAGCAATTaGCTGGGAAACCTAAGAATG +
Preference number: 4 (lower is better)
Translates to: IPFLSNHIQTGHTTHVCFAEGSN*LGNLRM
Trigger: CATTCTTAGGTTTCCCAGCCAATTGCTCCCTTCTGC...GAAACACACATGGGTAGTGTGACCTGTTTGGATGTGATTACTTAAAAATGGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp GACGCCTTCATTATAAAGTGGGAGTGTTTGTACTCTCAGTACCTAGTCACTTCTGCCTTCATTATAAAGTaGGAGTGTTTGTACTCTCAG +
Preference number: 4 (lower is better)
Translates to: DAFIIKWECLYSQYLVTSAFIIK*ECLYSQ
Trigger: CTGAGAGTACAAACACTCCCACTTTATAATGAAGGC...AGAAGTGACTAGGTACTGAGAGTACAAACACTCCCACTTTATAATGAAGGCGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR TCA 90 bp ATTCCATTTTTAAGTAATCACATCCAAACAGGTCACACTACCCATGTGTGTTTCGGTGATTGGAAACCCTaGAATCCTGTAGCAAAGTCT +
Preference number: 4 (lower is better)
Translates to: IPFLSNHIQTGHTTHVCFGDWKP*NPVAKS
Trigger: AGACTTTGCTACAGGATTTCAGGGTTTCCAATCACC...GAAACACACATGGGTAGTGTGACCTGTTTGGATGTGATTACTTAAAAATGGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR TCA 90 bp TCAGAATTTCAGGTATTGGAGTCAAACGATAAAATCCTGTTGGTGGCAACACTCCAGAACCTGCTTCTTTaGAAATCAAAACGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: SEFQVLESNDKILLVATLQNLLL*KSKRLL
Trigger: AAGAAGCCGTTTTGATTTTCAAAGAAGCAGGTTCTG...GAGTGTTGCCACCAACAGGATTTTATCGTTTGACTCCAATACCTGAAATTCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp GGTGTTTCCCACATGTCTCCAAGGCTCACCCAATTAATCCATTTTGTCAAAATCCTAAATAACACTTCATaGCCAACTGACACCTTCATT +
Preference number: 4 (lower is better)
Translates to: GVSHMSPRLTQLIHFVKILNNTS*PTDTFI
Trigger: AATGAAGGTGTCAGTTGGGCATGAAGTGTTATTTAG...GATTTTGACAAAATGGATTAATTGGGTGAGCCTTGGAGACATGTGGGAAACACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp TCATTTTGTGTCTGCAGGTGTTTCCCACATGTCTCCAAGGCTCACCCAATTAATAATGTCACCAGAACCTaGTTCTTTGAAAATCAAAAC +
Preference number: 4 (lower is better)
Translates to: SFCVCRCFPHVSKAHPINNVTRT*FFENQN
Trigger: GTTTTGATTTTCAAAGAAGCAGGTTCTGGTGACATT...ATTAATTGGGTGAGCCTTGGAGACATGTGGGAAACACCTGCAGACACAAAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp TCAGAATTTCAGGTATTGGAGTCAAACGATAAAATCCTGTTGGTGGCAACACTCGCCTTCATTATAAAGTaGGAGTGTTTGTACTCTCAG +
Preference number: 4 (lower is better)
Translates to: SEFQVLESNDKILLVATLAFIIK*ECLYSQ
Trigger: CTGAGAGTACAAACACTCCCACTTTATAATGAAGGC...GAGTGTTGCCACCAACAGGATTTTATCGTTTGACTCCAATACCTGAAATTCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp ATCGTTATGCTTTTGCATAGCCATCCTCTAGCAGTTTTATCAAAGCAGGACATATTTTCGGTGGGTCAATaGAGTGACATTTCACTACTG +
Preference number: 4 (lower is better)
Translates to: IVMLLHSHPLAVLSKQDIFSVGQ*SDISLL
Trigger: CAGTAGTGAAATGTCACTCCATTGACCCACCGAAAA...TATGTCCTGCTTTGATAAAACTGCTAGAGGATGGCTATGCAAAAGCATAACGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
3UTR CAA 72 bp GAATTTCAGGTATTGGAGTCAAACGATAAAATCCTGTaGGTGGCAACACTCACTCCAATCTTTGCTCCAATA +
Preference number: 4 (lower is better)
Translates to: EFQVLESNDKIL*VATLTPIFAPI
Trigger: TATTGGAGCAAAGATTGGAGTGAGTGTTGCCACCAACAGGATTTTATCGTTTGACTCCAATACCTGAAATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp GGTGTTTCCCACATGTCTCCAAGGCTCACCCAATTAATCCATTTTGTCAAAATCAATGTCACCAGAACCTaGTTCTTTGAAAATCAAAAC +
Preference number: 4 (lower is better)
Translates to: GVSHMSPRLTQLIHFVKINVTRT*FFENQN
Trigger: GTTTTGATTTTCAAAGAAGCAGGTTCTGGTGACATT...GATTTTGACAAAATGGATTAATTGGGTGAGCCTTGGAGACATGTGGGAAACACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp AACGATAAAATCCTGTTGGTGGCAACACTCACTCCAATCTTTGCTCCAATAGGAAATGTCACCAGAACCTaGTTCTTTGAAAATCAAAAC +
Preference number: 4 (lower is better)
Translates to: NDKILLVATLTPIFAPIGNVTRT*FFENQN
Trigger: GTTTTGATTTTCAAAGAAGCAGGTTCTGGTGACATT...TCCTATTGGAGCAAAGATTGGAGTGAGTGTTGCCACCAACAGGATTTTATCGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp ATTCCATTTTTAAGTAATCACATCCAAACAGGTCACACTACCCATGTGTGTTTCTTATGGTGCCTTTGCTaGTGTCAGCTCAAAAACTAC +
Preference number: 4 (lower is better)
Translates to: IPFLSNHIQTGHTTHVCFLWCLC*CQLKNY
Trigger: GTAGTTTTTGAGCTGACAGCAGCAAAGGCACCATAA...GAAACACACATGGGTAGTGTGACCTGTTTGGATGTGATTACTTAAAAATGGAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp ATTCCATTTTTAAGTAATCACATCCAAACAGGTCACACTACCCATGTGTGTTTCTATTTTGACTTATGGTaGCTTTGCTGCTGTCAGCTC +
Preference number: 4 (lower is better)
Translates to: IPFLSNHIQTGHTTHVCFYFDLW*LCCCQL
Trigger: GAGCTGACAGCAGCAAAGGCACCATAAGTCAAAATA...GAAACACACATGGGTAGTGTGACCTGTTTGGATGTGATTACTTAAAAATGGAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR GCA 90 bp CAAAAACTACCTGTACTTTGTTTCCTTGAATCGTTATGCTTTTGCATAGCCATCTATTTTGACTTATGGTaGCTTTGCTGCTGTCAGCTC +
Preference number: 4 (lower is better)
Translates to: QKLPVLCFLESLCFCIAIYFDLW*LCCCQL
Trigger: GAGCTGACAGCAGCAAAGGCACCATAAGTCAAAATA...GATGGCTATGCAAAAGCATAACGATTCAAGGAAACAAAGTACAGGTAGTTTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CCA 90 bp TCTGGGATCATTTCTGTAACAAACATTAGGCCCTTGGTTAGAAACATAGCTCTCTATCTACCTGAATGGTaGAACTTAAGGAACTTTCCA +
Preference number: 4 (lower is better)
Translates to: SGIISVTNIRPLVRNIALYLPEW*NLRNFP
Trigger: TGGAAAGTTCCTTAAGTTCCACCATTCAGGTAGATA...GAGAGCTATGTTTCTAACCAAGGGCCTAATGTTTGTTACAGAAATGATCCCAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR TCA 90 bp ATTCCATTTTTAAGTAATCACATCCAAACAGGTCACACTACCCATGTGTGTTTCTACTCTTTGTTCTTCTaGAAGGAGAAGTTTCTGCTG +
Preference number: 4 (lower is better)
Translates to: IPFLSNHIQTGHTTHVCFYSLFF*KEKFLL
Trigger: CAGCAGAAACTTCTCCTTTCAGAAGAACAAAGAGTA...GAAACACACATGGGTAGTGTGACCTGTTTGGATGTGATTACTTAAAAATGGAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR TCA 90 bp TTTTTAAGTAATCACATCCAAACAGGTCACACTACCCATGTGTGTTTCTTCATGACTTCTTGTATGGTCTaGAAAAAGAAGACTTTGGCA +
Preference number: 4 (lower is better)
Translates to: FLSNHIQTGHTTHVCFFMTSCMV*KKKTLA
Trigger: TGCCAAAGTCTTCTTTTTTCAGACCATACAAGAAGT...CATGAAGAAACACACATGGGTAGTGTGACCTGTTTGGATGTGATTACTTAAAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CAA 90 bp CTTGAGACCCTTGGGTCCCCCGTCCTGCACTGGACGACCCCTGACTGGGAGGAAGGGGAGGTTCCAGGTTaGCAGGCAGCTCAGGCAACG +
Preference number: 5 (lower is better)
Translates to: LETLGSPVLHWTTPDWEEGEVPG*QAAQAT
Trigger: CGTTGCCTGAGCTGCCTGCAAACCTGGAACCTCCCC...TTCCTCCCAGTCAGGGGTCGTCCAGTGCAGGACGGGGGACCCAAGGGTCTCAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS TCA 90 bp CTTCAGATGGGGGCTGCTTCTCTTGCCTCGGCCCTGGACTGGAGATaGCCTGGAACACAAAGGCTCTGGCCTGCTGCATGGGGGCTGGTG +
Preference number: 5 (lower is better)
Translates to: LQMGAASLASALDWR*PGTQRLWPAAWGLV
Trigger: CACCAGCCCCCATGCAGCAGGCCAGAGCCTTTGTGTTCCAGGTCATCTCCAGTCCAGGGCCGAGGCAAGAGAAGCAGCCCCCATCTGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000454973.1
CDS GCA 90 bp AGTGCTTGTTCCTGTAGTACTCCAAGACATCGGGGTTGCCGCTCATaGGGCCTCGCCGGAGGACAAACCAGCGCTTGCGCCAGGCGTAGC +
Preference number: 5 (lower is better)
Translates to: SACSCSTPRHRGCRS*GLAGGQTSACARRS
Trigger: GCTACGCCTGGCGCAAGCGCTGGTTTGTCCTCCGGCGAGGCCGCATGAGCGGCAACCCCGATGTCTTGGAGTACTACAGGAACAAGCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS GCA 90 bp GCTTGCTGGAGTGCTTGTTCCTGTAGTACTCCAAGACATCGGGGTTaGCGCTCATGCGGCCTCGCCGGAGGACAAACCAGCGCTTGCGCC +
Preference number: 5 (lower is better)
Translates to: ACWSACSCSTPRHRG*RSCGLAGGQTSACA
Trigger: GGCGCAAGCGCTGGTTTGTCCTCCGGCGAGGCCGCATGAGCGGCAACCCCGATGTCTTGGAGTACTACAGGAACAAGCACTCCAGCAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
ENST00000496390.5
CDS GCA 90 bp AGTGCTTGTTCCTGTAGTACTCCAAGACATCGGGGTTGCCGCTCATaGGGCCTCGCCGGAGGACAAACCAGCGCTTGCGCCAGGCCTGCA +
Preference number: 5 (lower is better)
Translates to: SACSCSTPRHRGCRS*GLAGGQTSACARPA
Trigger: TGCAGGCCTGGCGCAAGCGCTGGTTTGTCCTCCGGCGAGGCCGCATGAGCGGCAACCCCGATGTCTTGGAGTACTACAGGAACAAGCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496390.5
CDS-3UTR CAA 90 bp CTTGAGACCCTTGGGTCCCCCGTCCTGCACTGGACGACCCCTGACTGGGAGGAACCGTCCACTCCTGTTTaGTGCTCTGGAGAGCCTGTG +
Preference number: 5 (lower is better)
Translates to: LETLGSPVLHWTTPDWEEPSTPV*CSGEPV
Trigger: CACAGGCTCTCCAGAGCACAAAACAGGAGTGGACGG...TTCCTCCCAGTCAGGGGTCGTCCAGTGCAGGACGGGGGACCCAAGGGTCTCAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CAA 90 bp CTTGAGACCCTTGGGTCCCCCGTCCTGCACTGGACGACCCCTGACTGGGAGGAATGTACTCCACTCCTCTaGGCGCCGTTCAGACAGATG +
Preference number: 5 (lower is better)
Translates to: LETLGSPVLHWTTPDWEECTPLL*APFRQM
Trigger: CATCTGTCTGAACGGCGCCAAGAGGAGTGGAGTACA...TTCCTCCCAGTCAGGGGTCGTCCAGTGCAGGACGGGGGACCCAAGGGTCTCAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS CCA 90 bp AGGCCAGCACACTTCAGATGGGGGCTGCTTCTCTTGCCTCGGCCCTaGACTGGAGATGACCTGGAACACAAAGGCTCTGGCCTGCTGCAT +
Preference number: 5 (lower is better)
Translates to: RPAHFRWGLLLLPRP*TGDDLEHKGSGLLH
Trigger: ATGCAGCAGGCCAGAGCCTTTGTGTTCCAGGTCATCTCCAGTCCAGGGCCGAGGCAAGAGAAGCAGCCCCCATCTGAAGTGTGCTGGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454973.1
CDS-3UTR CAA 90 bp CTTGAGACCCTTGGGTCCCCCGTCCTGCACTGGACGACCCCTGACTGGGAGGAACGGGGAGGTGGAGTGTaGGACATAATGTCTAGTTCT +
Preference number: 5 (lower is better)
Translates to: LETLGSPVLHWTTPDWEERGGGV*DIMSSS
Trigger: AGAACTAGACATTATGTCCAACACTCCACCTCCCCG...TTCCTCCCAGTCAGGGGTCGTCCAGTGCAGGACGGGGGACCCAAGGGTCTCAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CAA 90 bp CTTGAGACCCTTGGGTCCCCCGTCCTGCACTGGACGACCCCTGACTGGGAGGAAATGGGAACTAGCAGTTaGAAGCCCTGGTTTCTTGCC +
Preference number: 5 (lower is better)
Translates to: LETLGSPVLHWTTPDWEEMGTSS*KPWFLA
Trigger: GGCAAGAAACCAGGGCTTCAAACTGCTAGTTCCCAT...TTCCTCCCAGTCAGGGGTCGTCCAGTGCAGGACGGGGGACCCAAGGGTCTCAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS TCA 90 bp TCCGAACAAAGCTGGGGCCCACATGCTTCCACACTGCACACTCGCTaGGGTCTATCACCCGGATGGGCTTGCTGGAGTGCTTGTTCCTGT +
Preference number: 5 (lower is better)
Translates to: SEQSWGPHASTLHTR*GLSPGWACWSACSC
Trigger: ACAGGAACAAGCACTCCAGCAAGCCCATCCGGGTGATAGACCTCAGCGAGTGTGCAGTGTGGAAGCATGTGGGCCCCAGCTTTGTTCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
ENST00000496390.5
CDS CCA 90 bp TGCAATCTCTCTTTTTCCTCTGCCAGGAGGCCAGCACACTTCAGATaGGGGCTGCTTCTCTTGCCTCGGCCCTGGACTGGAGATGACCTG +
Preference number: 5 (lower is better)
Translates to: CNLSFSSARRPAHFR*GLLLLPRPWTGDDL
Trigger: CAGGTCATCTCCAGTCCAGGGCCGAGGCAAGAGAAGCAGCCCCCATCTGAAGTGTGCTGGCCTCCTGGCAGAGGAAAAAGAGAGATTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454973.1
CDS-3UTR CAA 90 bp TGGACTTGCAGGCTTGAGACCCTTGGGTCCCCCGTCCTGCACTGGACGACCCCTCTGTTCAGATCCCTATaGAAAGGGAGACAGGATGAC +
Preference number: 5 (lower is better)
Translates to: WTCRLETLGSPVLHWTTPLFRSL*KGRQDD
Trigger: GTCATCCTGTCTCCCTTTCAATAGGGATCTGAACAG...AGGGGTCGTCCAGTGCAGGACGGGGGACCCAAGGGTCTCAAGCCTGCAAGTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS GCA 90 bp CTGAAATTCCTTCCGAACAAAGCTGGGGCCCACATGCTTCCACACTaGACACTCGCTGAGGTCTATCACCCGGATGGGCTTGCTGGAGTG +
Preference number: 5 (lower is better)
Translates to: LKFLPNKAGAHMLPH*TLAEVYHPDGLAGV
Trigger: CACTCCAGCAAGCCCATCCGGGTGATAGACCTCAGCGAGTGTGCAGTGTGGAAGCATGTGGGCCCCAGCTTTGTTCGGAAGGAATTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
ENST00000496390.5
CDS GCA 90 bp GGGGAGGTTCCAGGTTTGCAGGCAGCTCAGGCAACGGGCTTGAGATaGTTCCTGAGTTCATTGGAATGTAGTCATCAGGGCTGCAGTGGG +
Preference number: 5 (lower is better)
Translates to: GEVPGLQAAQATGLR*FLSSLECSHQGCSG
Trigger: CCCACTGCAGCCCTGATGACTACATTCCAATGAACTCAGGAAGCATCTCAAGCCCGTTGCCTGAGCTGCCTGCAAACCTGGAACCTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
ENST00000496390.5
CDS-3UTR CAA 90 bp AATAGGACAGAGGGGAGGCTAGATTCTCTCAGAGCCCCCTCCGGAAGGCAACTGGCTCAGGCAACGGGCTaGAGATGCTTCCTGAGTTCA +
Preference number: 5 (lower is better)
Translates to: NRTEGRLDSLRAPSGRQLAQATG*RCFLSS
Trigger: TGAACTCAGGAAGCATCTCAAGCCCGTTGCCTGAGC...CAGTTGCCTTCCGGAGGGGGCTCTGAGAGAATCTAGCCTCCCCTCTGTCCTATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS GCA 90 bp AAAGCTGGTTCGACTGCAAGGCACAGTGCGGGTCCTGGTAAGAGATaGATGTTCCCGGATGATCGAGAGGTTTCTCAGGTCCAGAGGAGG +
Preference number: 5 (lower is better)
Translates to: KAGSTARHSAGPGKR*MFPDDREVSQVQRR
Trigger: CCTCCTCTGGACCTGAGAAACCTCTCGATCATCCGGGAACATGCATCTCTTACCAGGACCCGCACTGTGCCTTGCAGTCGAACCAGCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
ENST00000496390.5
CDS CCA 90 bp TCTGGTTTCCTCAGTGGCTACGGCATTAGTGTTTGGGTCATCTCTTaGCAAAGAGGAGCTGGCAGCATGGGCGGTAAGAAGGGAGCTGGC +
Preference number: 5 (lower is better)
Translates to: SGFLSGYGISVWVIS*QRGAGSMGGKKGAG
Trigger: GCCAGCTCCCTTCTTACCGCCCATGCTGCCAGCTCCTCTTTGCCAAGAGATGACCCAAACACTAATGCCGTAGCCACTGAGGAAACCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
ENST00000496390.5
CDS-3UTR CAA 90 bp CTACTCATTTTGTGTCTGCAGGTGTTTCCCACATGTCTCCAAGGCTCACCCAATTCCAAGACATCGGGGTaGCCGCTCATGCGGCCTCGC +
Preference number: 5 (lower is better)
Translates to: LLILCLQVFPTCLQGSPNSKTSG*PLMRPR
Trigger: GCGAGGCCGCATGAGCGGCAACCCCGATGTCTTGGA...ATTGGGTGAGCCTTGGAGACATGTGGGAAACACCTGCAGACACAAAATGAGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CAA 90 bp CTTGAGACCCTTGGGTCCCCCGTCCTGCACTGGACGACCCCTGACTGGGAGGAAATAAAGTGGGAGTGTTaGTACTCTCAGTACCTAGTC +
Preference number: 5 (lower is better)
Translates to: LETLGSPVLHWTTPDWEEIKWEC*YSQYLV
Trigger: GACTAGGTACTGAGAGTACAAACACTCCCACTTTAT...TTCCTCCCAGTCAGGGGTCGTCCAGTGCAGGACGGGGGACCCAAGGGTCTCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CAA 90 bp CTTGAGACCCTTGGGTCCCCCGTCCTGCACTGGACGACCCCTGACTGGGAGGAAGGCCTGACTGCCAATTaGATCTATCCTCATAAAGAA +
Preference number: 5 (lower is better)
Translates to: LETLGSPVLHWTTPDWEEGLTAN*IYPHKE
Trigger: TTCTTTATGAGGATAGATCAAATTGGCAGTCAGGCC...TTCCTCCCAGTCAGGGGTCGTCCAGTGCAGGACGGGGGACCCAAGGGTCTCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CAA 90 bp CTTGAGACCCTTGGGTCCCCCGTCCTGCACTGGACGACCCCTGACTGGGAGGAAACAAACATTAGGCCCTaGGTTAGAAACATAGCTCTC +
Preference number: 5 (lower is better)
Translates to: LETLGSPVLHWTTPDWEETNIRP*VRNIAL
Trigger: GAGAGCTATGTTTCTAACCAAGGGCCTAATGTTTGT...TTCCTCCCAGTCAGGGGTCGTCCAGTGCAGGACGGGGGACCCAAGGGTCTCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS TCA 90 bp TGGAATCTGCACCATCCTCCAGGTGGCCAAGGTTGCAGACCTGACTaGTGCTGTGCACCCACACCTGCATTTCTTGCTCAGTTTTGGCCA +
Preference number: 5 (lower is better)
Translates to: WNLHHPPGGQGCRPD*CCAPTPAFLAQFWP
Trigger: TGGCCAAAACTGAGCAAGAAATGCAGGTGTGGGTGCACAGCATCAGTCAGGTCTGCAACCTTGGCCACCTGGAGGATGGTGCAGATTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369575.7
CDS TCA 90 bp TTTCCAGCAATGGTGAAGAAGACAAGTGGTCCCTGGGTGGCCCATTaGTTTCTCTACTCCAGATCAGGGCAGCCTGAGGCCTCGAGGATG +
Preference number: 5 (lower is better)
Translates to: FPAMVKKTSGPWVAH*FLYSRSGQPEASRM
Trigger: CATCCTCGAGGCCTCAGGCTGCCCTGATCTGGAGTAGAGAAATCAATGGGCCACCCAGGGACCACTTGTCTTCTTCACCATTGCTGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS TCA 90 bp AATCTGCTGCACCATCCTCCAGGTGGCCAAGGTTGCAGACCTGACTaGTGCTGTGCACCCACACCTGCATTTCTTGCTCAGTTTTGGCCA +
Preference number: 5 (lower is better)
Translates to: NLLHHPPGGQGCRPD*CCAPTPAFLAQFWP
Trigger: TGGCCAAAACTGAGCAAGAAATGCAGGTGTGGGTGCACAGCATCAGTCAGGTCTGCAACCTTGGCCACCTGGAGGATGGTGCAGCAGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000424127.3
ENST00000496390.5
CDS-3UTR CAA 90 bp CTACTCATTTTGTGTCTGCAGGTGTTTCCCACATGTCTCCAAGGCTCACCCAATGGGGAGGTTCCAGGTTaGCAGGCAGCTCAGGCAACG +
Preference number: 5 (lower is better)
Translates to: LLILCLQVFPTCLQGSPNGEVPG*QAAQAT
Trigger: CGTTGCCTGAGCTGCCTGCAAACCTGGAACCTCCCC...ATTGGGTGAGCCTTGGAGACATGTGGGAAACACCTGCAGACACAAAATGAGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CAA 90 bp AGGAAAAAGCCAGGTCTGAGGAGAGCCTTCAGTTTCAACTCGGAACTTTTAAAGTCCAAGACATCGGGGTaGCCGCTCATGCGGCCTCGC +
Preference number: 5 (lower is better)
Translates to: RKKPGLRRAFSFNSELLKSKTSG*PLMRPR
Trigger: GCGAGGCCGCATGAGCGGCAACCCCGATGTCTTGGA...CTTTAAAAGTTCCGAGTTGAAACTGAAGGCTCTCCTCAGACCTGGCTTTTTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CAA 90 bp CATCTCCACCAAAACCAATATTTTGACTTATGGTGCCTTTGCTGCTGTCAGCTCGCAGGCTTGAGACCCTaGGGTCCCCCGTCCTGCACT +
Preference number: 5 (lower is better)
Translates to: HLHQNQYFDLWCLCCCQLAGLRP*GPPSCT
Trigger: AGTGCAGGACGGGGGACCCAAGGGTCTCAAGCCTGC...GAGCTGACAGCAGCAAAGGCACCATAAGTCAAAATATTGGTTTTGGTGGAGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS GCA 90 bp CAGAGAGGGAGATTCTTCTTGGAACCAGAGTGCATTCTGGCTTCTTaGTACCACTGTGTGTACTCCACTCCTCTTGGCGCCGTTCAGACA +
Preference number: 5 (lower is better)
Translates to: QRGRFFLEPECILAS*YHCVYSTPLGAVQT
Trigger: TGTCTGAACGGCGCCAAGAGGAGTGGAGTACACACAGTGGTAGCAAGAAGCCAGAATGCACTCTGGTTCCAAGAAGAATCTCCCTCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS GCA 90 bp CCTGTTTCACACATGGCACAAGCCCGCACCTCTCATACTTTGGATTaGCTTTCATCCGTCCACTCCTGTTTTGTGCTCTGGAGAGCCTGT +
Preference number: 5 (lower is better)
Translates to: PVSHMAQARTSHTLD*LSSVHSCFVLWRAC
Trigger: ACAGGCTCTCCAGAGCACAAAACAGGAGTGGACGGATGAAAGGCAATCCAAAGTATGAGAGGTGCGGGCTTGTGCCATGTGTGAAACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
ENST00000496390.5
CDS CCA 90 bp GCTTCCCTGTTTCACACATGGCACAAGCCCGCACCTCTCATACTTTaGATTGCCTTTCATCCGTCCACTCCTGTTTTGTGCTCTGGAGAG +
Preference number: 5 (lower is better)
Translates to: ASLFHTWHKPAPLIL*IAFHPSTPVLCSGE
Trigger: CTCTCCAGAGCACAAAACAGGAGTGGACGGATGAAAGGCAATCCAAAGTATGAGAGGTGCGGGCTTGTGCCATGTGTGAAACAGGGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
ENST00000496390.5
CDS-3UTR CAA 90 bp CCTGTTGGTGGCAACACTCACTCCAATCTTTGCTCCAATAGGACAGAGGGGAGGATGGGAACTAGCAGTTaGAAGCCCTGGTTTCTTGCC +
Preference number: 5 (lower is better)
Translates to: PVGGNTHSNLCSNRTEGRMGTSS*KPWFLA
Trigger: GGCAAGAAACCAGGGCTTCAAACTGCTAGTTCCCAT...CCTCCCCTCTGTCCTATTGGAGCAAAGATTGGAGTGAGTGTTGCCACCAACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS GCA 90 bp AGGAGAAAGAGGTATTCTGTGATTCTGCAATCTCTCTTTTTCCTCTaGCAGGAGGCCAGCACACTTCAGATGGGGGCTGCTTCTCTTGCC +
Preference number: 5 (lower is better)
Translates to: RRKRYSVILQSLFFL*QEASTLQMGAASLA
Trigger: GGCAAGAGAAGCAGCCCCCATCTGAAGTGTGCTGGCCTCCTGGCAGAGGAAAAAGAGAGATTGCAGAATCACAGAATACCTCTTTCTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000454973.1
CDS-3UTR CAA 90 bp TCTCAGTCAGAATGCAGGACCAGTATCTGCTTAGTTTCCAGCTGTAGGTGCTCAGCTCAGGCAACGGGCTaGAGATGCTTCCTGAGTTCA +
Preference number: 5 (lower is better)
Translates to: SQSECRTSICLVSSCRCSAQATG*RCFLSS
Trigger: TGAACTCAGGAAGCATCTCAAGCCCGTTGCCTGAGC...TGAGCACCTACAGCTGGAAACTAAGCAGATACTGGTCCTGCATTCTGACTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CAA 90 bp GTAGGTGCTCAGAAGGATCAAGAATGGACACTAAATAACACTTCATGCCCAACTGGGGAGGTTCCAGGTTaGCAGGCAGCTCAGGCAACG +
Preference number: 5 (lower is better)
Translates to: VGAQKDQEWTLNNTSCPTGEVPG*QAAQAT
Trigger: CGTTGCCTGAGCTGCCTGCAAACCTGGAACCTCCCC...AGTTGGGCATGAAGTGTTATTTAGTGTCCATTCTTGATCCTTCTGAGCACCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CAA 90 bp AGGAAAAAGCCAGGTCTGAGGAGAGCCTTCAGTTTCAACTCGGAACTTTTAAAGATCACCCGGATGGGCTaGCTGGAGTGCTTGTTCCTG +
Preference number: 5 (lower is better)
Translates to: RKKPGLRRAFSFNSELLKITRMG*LECLFL
Trigger: CAGGAACAAGCACTCCAGCAAGCCCATCCGGGTGAT...CTTTAAAAGTTCCGAGTTGAAACTGAAGGCTCTCCTCAGACCTGGCTTTTTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CAA 90 bp TCTCAGTCAGAATGCAGGACCAGTATCTGCTTAGTTTCCAGCTGTAGGTGCTCATCCCTGGGTGGCCCATaGATTTCTCTACTCCAGATC +
Preference number: 5 (lower is better)
Translates to: SQSECRTSICLVSSCRCSSLGGP*ISLLQI
Trigger: GATCTGGAGTAGAGAAATCAATGGGCCACCCAGGGA...TGAGCACCTACAGCTGGAAACTAAGCAGATACTGGTCCTGCATTCTGACTGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CAA 90 bp TTGCTGCATTGCCCTGTTATGCTGATTCCCACATCTTGTAGGTCTCTGGGATCACCACCATTGCTGGGCTaGATCTCCTCAACTGTCTTC +
Preference number: 5 (lower is better)
Translates to: LLHCPVMLIPTSCRSLGSPPLLG*ISSTVF
Trigger: GAAGACAGTTGAGGAGATCAAGCCCAGCAATGGTGG...TGATCCCAGAGACCTACAAGATGTGGGAATCAGCATAACAGGGCAATGCAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS CCA 90 bp ATGGTGGAACTTAAGGAACTTTCCAGCAATGGTGAAGAAGACAAGTaGTCCCTGGGTGGCCCATTGATTTCTCTACTCCAGATCAGGGCA +
Preference number: 5 (lower is better)
Translates to: MVELKELSSNGEEDK*SLGGPLISLLQIRA
Trigger: TGCCCTGATCTGGAGTAGAGAAATCAATGGGCCACCCAGGGACCACTTGTCTTCTTCACCATTGCTGGAAAGTTCCTTAAGTTCCACCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CAA 90 bp TACTCTCAGTACCTAGTCACTTCTAAAGCAGAAGGGAGCAATTGGCTGGGAAACCCACACCTGCATTTCTaGCTCAGTTTTGGCCACCAG +
Preference number: 5 (lower is better)
Translates to: YSQYLVTSKAEGSNWLGNPHLHF*LSFGHQ
Trigger: CTGGTGGCCAAAACTGAGCAAGAAATGCAGGTGTGG...GTTTCCCAGCCAATTGCTCCCTTCTGCTTTAGAAGTGACTAGGTACTGAGAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CAA 90 bp GACGCCTTCATTATAAAGTGGGAGTGTTTGTACTCTCAGTACCTAGTCACTTCTCCGTCCACTCCTGTTTaGTGCTCTGGAGAGCCTGTG +
Preference number: 5 (lower is better)
Translates to: DAFIIKWECLYSQYLVTSPSTPV*CSGEPV
Trigger: CACAGGCTCTCCAGAGCACAAAACAGGAGTGGACGG...AGAAGTGACTAGGTACTGAGAGTACAAACACTCCCACTTTATAATGAAGGCGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CAA 90 bp TTGCTCTGTCCAGGCTCACTAAGGACCCTGAACTCAGTTAAAATACTTAGAAATATCACCCGGATGGGCTaGCTGGAGTGCTTGTTCCTG +
Preference number: 5 (lower is better)
Translates to: LLCPGSLRTLNSVKILRNITRMG*LECLFL
Trigger: CAGGAACAAGCACTCCAGCAAGCCCATCCGGGTGAT...ATTTCTAAGTATTTTAACTGAGTTCAGGGTCCTTAGTGAGCCTGGACAGAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CAA 90 bp TCAGAATTTCAGGTATTGGAGTCAAACGATAAAATCCTGTTGGTGGCAACACTCATCACCCGGATGGGCTaGCTGGAGTGCTTGTTCCTG +
Preference number: 5 (lower is better)
Translates to: SEFQVLESNDKILLVATLITRMG*LECLFL
Trigger: CAGGAACAAGCACTCCAGCAAGCCCATCCGGGTGAT...GAGTGTTGCCACCAACAGGATTTTATCGTTTGACTCCAATACCTGAAATTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CAA 90 bp CCTGTTGGTGGCAACACTCACTCCAATCTTTGCTCCAATAGGACAGAGGGGAGGGTACGGGAAGTAGTCTaGACAATGAACACGAAATTA +
Preference number: 5 (lower is better)
Translates to: PVGGNTHSNLCSNRTEGRVREVV*TMNTKL
Trigger: TAATTTCGTGTTCATTGTCAAGACTACTTCCCGTAC...CCTCCCCTCTGTCCTATTGGAGCAAAGATTGGAGTGAGTGTTGCCACCAACAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CAA 90 bp GCTGTAGGTGCTCAGAAGGATCAAGAATGGACACTAAATAACACTTCATGCCCATGTTTGGGTCATCTCTaGGCAAAGAGGAGCTGGCAG +
Preference number: 5 (lower is better)
Translates to: AVGAQKDQEWTLNNTSCPCLGHL*AKRSWQ
Trigger: CTGCCAGCTCCTCTTTGCCAAGAGATGACCCAAACA...TGGGCATGAAGTGTTATTTAGTGTCCATTCTTGATCCTTCTGAGCACCTACAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CAA 90 bp CATCTCCACCAAAACCAATATTTTGACTTATGGTGCCTTTGCTGCTGTCAGCTCTCCCTGGGTGGCCCATaGATTTCTCTACTCCAGATC +
Preference number: 5 (lower is better)
Translates to: HLHQNQYFDLWCLCCCQLSLGGP*ISLLQI
Trigger: GATCTGGAGTAGAGAAATCAATGGGCCACCCAGGGA...GAGCTGACAGCAGCAAAGGCACCATAAGTCAAAATATTGGTTTTGGTGGAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CAA 90 bp CACATGTCTCCAAGGCTCACCCAATTAATCCATTTTGTCAAAATCCTCAGAGGATGTACTCCACTCCTCTaGGCGCCGTTCAGACAGATG +
Preference number: 5 (lower is better)
Translates to: HMSPRLTQLIHFVKILRGCTPLL*APFRQM
Trigger: CATCTGTCTGAACGGCGCCAAGAGGAGTGGAGTACA...TCCTCTGAGGATTTTGACAAAATGGATTAATTGGGTGAGCCTTGGAGACATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CAA 90 bp TACTCTCAGTACCTAGTCACTTCTAAAGCAGAAGGGAGCAATTGGCTGGGAAACCGCACCTCTCATACTTaGGATTGCCTTTCATCCGTC +
Preference number: 5 (lower is better)
Translates to: YSQYLVTSKAEGSNWLGNRTSHT*DCLSSV
Trigger: GACGGATGAAAGGCAATCCAAAGTATGAGAGGTGCG...GTTTCCCAGCCAATTGCTCCCTTCTGCTTTAGAAGTGACTAGGTACTGAGAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CAA 90 bp GGTGTTTCCCACATGTCTCCAAGGCTCACCCAATTAATCCATTTTGTCAAAATCCCAGTGCTCCTGGGTTaGTCACCTTCTGGACTTGCA +
Preference number: 5 (lower is better)
Translates to: GVSHMSPRLTQLIHFVKIPVLLG*SPSGLA
Trigger: TGCAAGTCCAGAAGGTGACAAACCCAGGAGCACTGG...GATTTTGACAAAATGGATTAATTGGGTGAGCCTTGGAGACATGTGGGAAACACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CAA 90 bp AACGATAAAATCCTGTTGGTGGCAACACTCACTCCAATCTTTGCTCCAATAGGACCAGTGCTCCTGGGTTaGTCACCTTCTGGACTTGCA +
Preference number: 5 (lower is better)
Translates to: NDKILLVATLTPIFAPIGPVLLG*SPSGLA
Trigger: TGCAAGTCCAGAAGGTGACAAACCCAGGAGCACTGG...TCCTATTGGAGCAAAGATTGGAGTGAGTGTTGCCACCAACAGGATTTTATCGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS GCA 90 bp TCATGTTGTCTAAACCAGAGAGGGAGATTCTTCTTGGAACCAGAGTaGATTCTGGCTTCTTGCTACCACTGTGTGTACTCCACTCCTCTT +
Preference number: 5 (lower is better)
Translates to: SCCLNQRGRFFLEPE*ILASCYHCVYSTPL
Trigger: AAGAGGAGTGGAGTACACACAGTGGTAGCAAGAAGCCAGAATGCACTCTGGTTCCAAGAAGAATCTCCCTCTCTGGTTTAGACAACATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CAA 90 bp GAGAGCCTTCAGTTTCAACTCGGAACTTTTAAAGGTCATGATTCAGCTGATCCTCCACACCTGCATTTCTaGCTCAGTTTTGGCCACCAG +
Preference number: 5 (lower is better)
Translates to: ESLQFQLGTFKGHDSADPPHLHF*LSFGHQ
Trigger: CTGGTGGCCAAAACTGAGCAAGAAATGCAGGTGTGG...AGGATCAGCTGAATCATGACCTTTAAAAGTTCCGAGTTGAAACTGAAGGCTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CAA 90 bp GCTCTCTCTCACACACACACATCGATCATCTCCACCAAAACCAATATTTTGACTCCACACCTGCATTTCTaGCTCAGTTTTGGCCACCAG +
Preference number: 5 (lower is better)
Translates to: ALSHTHTSIISTKTNILTPHLHF*LSFGHQ
Trigger: CTGGTGGCCAAAACTGAGCAAGAAATGCAGGTGTGG...AGTCAAAATATTGGTTTTGGTGGAGATGATCGATGTGTGTGTGTGAGAGAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CAA 90 bp GACGCCTTCATTATAAAGTGGGAGTGTTTGTACTCTCAGTACCTAGTCACTTCTTGTTTGGGTCATCTCTaGGCAAAGAGGAGCTGGCAG +
Preference number: 5 (lower is better)
Translates to: DAFIIKWECLYSQYLVTSCLGHL*AKRSWQ
Trigger: CTGCCAGCTCCTCTTTGCCAAGAGATGACCCAAACA...AGAAGTGACTAGGTACTGAGAGTACAAACACTCCCACTTTATAATGAAGGCGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CAA 90 bp AAAAGAAGACTTTGGCATTCACTTACCTGTGGGGTGATTGGAAACCCTGAAATCTCCCTGGGTGGCCCATaGATTTCTCTACTCCAGATC +
Preference number: 5 (lower is better)
Translates to: KRRLWHSLTCGVIGNPEISLGGP*ISLLQI
Trigger: GATCTGGAGTAGAGAAATCAATGGGCCACCCAGGGA...GATTTCAGGGTTTCCAATCACCCCACAGGTAAGTGAATGCCAAAGTCTTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CAA 90 bp CTACTCATTTTGTGTCTGCAGGTGTTTCCCACATGTCTCCAAGGCTCACCCAATCTTCTGCTCATCCACTaGGACATAGTCTACTCTTTG +
Preference number: 5 (lower is better)
Translates to: LLILCLQVFPTCLQGSPNLLLIH*DIVYSL
Trigger: CAAAGAGTAGACTATGTCCAAGTGGATGAGCAGAAG...ATTGGGTGAGCCTTGGAGACATGTGGGAAACACCTGCAGACACAAAATGAGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CAA 90 bp ATCGTTATGCTTTTGCATAGCCATCCTCTAGCAGTTTTATCAAAGCAGGACATACCGTCCACTCCTGTTTaGTGCTCTGGAGAGCCTGTG +
Preference number: 5 (lower is better)
Translates to: IVMLLHSHPLAVLSKQDIPSTPV*CSGEPV
Trigger: CACAGGCTCTCCAGAGCACAAAACAGGAGTGGACGG...TATGTCCTGCTTTGATAAAACTGCTAGAGGATGGCTATGCAAAAGCATAACGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CAA 90 bp CTACTCATTTTGTGTCTGCAGGTGTTTCCCACATGTCTCCAAGGCTCACCCAATAACGATAAAATCCTGTaGGTGGCAACACTCACTCCA +
Preference number: 5 (lower is better)
Translates to: LLILCLQVFPTCLQGSPNNDKIL*VATLTP
Trigger: TGGAGTGAGTGTTGCCACCAACAGGATTTTATCGTT...ATTGGGTGAGCCTTGGAGACATGTGGGAAACACCTGCAGACACAAAATGAGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CAA 90 bp GAGAGCCTTCAGTTTCAACTCGGAACTTTTAAAGGTCATGATTCAGCTGATCCTCCACCATTGCTGGGCTaGATCTCCTCAACTGTCTTC +
Preference number: 5 (lower is better)
Translates to: ESLQFQLGTFKGHDSADPPPLLG*ISSTVF
Trigger: GAAGACAGTTGAGGAGATCAAGCCCAGCAATGGTGG...AGGATCAGCTGAATCATGACCTTTAAAAGTTCCGAGTTGAAACTGAAGGCTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CAA 90 bp TCTCAGTCAGAATGCAGGACCAGTATCTGCTTAGTTTCCAGCTGTAGGTGCTCAAATCTGGTGTGGTTCTaGACACTTGGGCCTACAATT +
Preference number: 5 (lower is better)
Translates to: SQSECRTSICLVSSCRCSNLVWF*TLGPTI
Trigger: AATTGTAGGCCCAAGTGTCAAGAACCACACCAGATT...TGAGCACCTACAGCTGGAAACTAAGCAGATACTGGTCCTGCATTCTGACTGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CAA 90 bp TCATTTTGTGTCTGCAGGTGTTTCCCACATGTCTCCAAGGCTCACCCAATTAATATGAACGGTCTGAGTTaGACCAGCTATCACATCTGG +
Preference number: 5 (lower is better)
Translates to: SFCVCRCFPHVSKAHPINMNGLS*TSYHIW
Trigger: CCAGATGTGATAGCTGGTCAAACTCAGACCGTTCAT...ATTAATTGGGTGAGCCTTGGAGACATGTGGGAAACACCTGCAGACACAAAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CAA 90 bp CACATGTCTCCAAGGCTCACCCAATTAATCCATTTTGTCAAAATCCTCAGAGGACGGGGAGGTGGAGTGTaGGACATAATGTCTAGTTCT +
Preference number: 5 (lower is better)
Translates to: HMSPRLTQLIHFVKILRGRGGGV*DIMSSS
Trigger: AGAACTAGACATTATGTCCAACACTCCACCTCCCCG...TCCTCTGAGGATTTTGACAAAATGGATTAATTGGGTGAGCCTTGGAGACATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CAA 90 bp AAAAGAAGACTTTGGCATTCACTTACCTGTGGGGTGATTGGAAACCCTGAAATCGTGCATTCTGGCTTCTaGCTACCACTGTGTGTACTC +
Preference number: 5 (lower is better)
Translates to: KRRLWHSLTCGVIGNPEIVHSGF*LPLCVL
Trigger: GAGTACACACAGTGGTAGCAAGAAGCCAGAATGCAC...GATTTCAGGGTTTCCAATCACCCCACAGGTAAGTGAATGCCAAAGTCTTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CAA 90 bp TCATTTTGTGTCTGCAGGTGTTTCCCACATGTCTCCAAGGCTCACCCAATTAATTTCCAGGTTCTCATGTaGTCTAAACCAGAGAGGGAG +
Preference number: 5 (lower is better)
Translates to: SFCVCRCFPHVSKAHPINFQVLM*SKPERE
Trigger: CTCCCTCTCTGGTTTAGACAACATGAGAACCTGGAA...ATTAATTGGGTGAGCCTTGGAGACATGTGGGAAACACCTGCAGACACAAAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CAA 90 bp AAAAGAAGACTTTGGCATTCACTTACCTGTGGGGTGATTGGAAACCCTGAAATCCGCACCTCTCATACTTaGGATTGCCTTTCATCCGTC +
Preference number: 5 (lower is better)
Translates to: KRRLWHSLTCGVIGNPEIRTSHT*DCLSSV
Trigger: GACGGATGAAAGGCAATCCAAAGTATGAGAGGTGCG...GATTTCAGGGTTTCCAATCACCCCACAGGTAAGTGAATGCCAAAGTCTTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CAA 90 bp GAGAGCCTTCAGTTTCAACTCGGAACTTTTAAAGGTCATGATTCAGCTGATCCTCGCACCTCTCATACTTaGGATTGCCTTTCATCCGTC +
Preference number: 5 (lower is better)
Translates to: ESLQFQLGTFKGHDSADPRTSHT*DCLSSV
Trigger: GACGGATGAAAGGCAATCCAAAGTATGAGAGGTGCG...AGGATCAGCTGAATCATGACCTTTAAAAGTTCCGAGTTGAAACTGAAGGCTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CAA 90 bp TCTCAGTCAGAATGCAGGACCAGTATCTGCTTAGTTTCCAGCTGTAGGTGCTCAACTACACATTCTCTCTaGGTTTTGACCTGTGTTGAC +
Preference number: 5 (lower is better)
Translates to: SQSECRTSICLVSSCRCSTTHSL*VLTCVD
Trigger: GTCAACACAGGTCAAAACCAAGAGAGAATGTGTAGT...TGAGCACCTACAGCTGGAAACTAAGCAGATACTGGTCCTGCATTCTGACTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CAA 90 bp GCTGTAGGTGCTCAGAAGGATCAAGAATGGACACTAAATAACACTTCATGCCCACTGTTCAGATCCCTATaGAAAGGGAGACAGGATGAC +
Preference number: 5 (lower is better)
Translates to: AVGAQKDQEWTLNNTSCPLFRSL*KGRQDD
Trigger: GTCATCCTGTCTCCCTTTCAATAGGGATCTGAACAG...TGGGCATGAAGTGTTATTTAGTGTCCATTCTTGATCCTTCTGAGCACCTACAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CAA 90 bp AGGAAAAAGCCAGGTCTGAGGAGAGCCTTCAGTTTCAACTCGGAACTTTTAAAGCTGTTCAGATCCCTATaGAAAGGGAGACAGGATGAC +
Preference number: 5 (lower is better)
Translates to: RKKPGLRRAFSFNSELLKLFRSL*KGRQDD
Trigger: GTCATCCTGTCTCCCTTTCAATAGGGATCTGAACAG...CTTTAAAAGTTCCGAGTTGAAACTGAAGGCTCTCCTCAGACCTGGCTTTTTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CAA 90 bp TCTCAGTCAGAATGCAGGACCAGTATCTGCTTAGTTTCCAGCTGTAGGTGCTCAGGCCTGACTGCCAATTaGATCTATCCTCATAAAGAA +
Preference number: 5 (lower is better)
Translates to: SQSECRTSICLVSSCRCSGLTAN*IYPHKE
Trigger: TTCTTTATGAGGATAGATCAAATTGGCAGTCAGGCC...TGAGCACCTACAGCTGGAAACTAAGCAGATACTGGTCCTGCATTCTGACTGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CAA 90 bp GAGAGCCTTCAGTTTCAACTCGGAACTTTTAAAGGTCATGATTCAGCTGATCCTATGGGAACTAGCAGTTaGAAGCCCTGGTTTCTTGCC +
Preference number: 5 (lower is better)
Translates to: ESLQFQLGTFKGHDSADPMGTSS*KPWFLA
Trigger: GGCAAGAAACCAGGGCTTCAAACTGCTAGTTCCCAT...AGGATCAGCTGAATCATGACCTTTAAAAGTTCCGAGTTGAAACTGAAGGCTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CAA 90 bp TCATTTTGTGTCTGCAGGTGTTTCCCACATGTCTCCAAGGCTCACCCAATTAATGGGTTAATTGCTGCATaGCCCTGTTATGCTGATTCC +
Preference number: 5 (lower is better)
Translates to: SFCVCRCFPHVSKAHPINGLIAA*PCYADS
Trigger: GGAATCAGCATAACAGGGCAATGCAGCAATTAACCC...ATTAATTGGGTGAGCCTTGGAGACATGTGGGAAACACCTGCAGACACAAAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CAA 90 bp TTGCTGCATTGCCCTGTTATGCTGATTCCCACATCTTGTAGGTCTCTGGGATCAGTACGGGAAGTAGTCTaGACAATGAACACGAAATTA +
Preference number: 5 (lower is better)
Translates to: LLHCPVMLIPTSCRSLGSVREVV*TMNTKL
Trigger: TAATTTCGTGTTCATTGTCAAGACTACTTCCCGTAC...TGATCCCAGAGACCTACAAGATGTGGGAATCAGCATAACAGGGCAATGCAGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CAA 90 bp GAGAGCCTTCAGTTTCAACTCGGAACTTTTAAAGGTCATGATTCAGCTGATCCTATGAACGGTCTGAGTTaGACCAGCTATCACATCTGG +
Preference number: 5 (lower is better)
Translates to: ESLQFQLGTFKGHDSADPMNGLS*TSYHIW
Trigger: CCAGATGTGATAGCTGGTCAAACTCAGACCGTTCAT...AGGATCAGCTGAATCATGACCTTTAAAAGTTCCGAGTTGAAACTGAAGGCTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CAA 90 bp TCAGAATTTCAGGTATTGGAGTCAAACGATAAAATCCTGTTGGTGGCAACACTCCGGGGAGGTGGAGTGTaGGACATAATGTCTAGTTCT +
Preference number: 5 (lower is better)
Translates to: SEFQVLESNDKILLVATLRGGGV*DIMSSS
Trigger: AGAACTAGACATTATGTCCAACACTCCACCTCCCCG...GAGTGTTGCCACCAACAGGATTTTATCGTTTGACTCCAATACCTGAAATTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CAA 90 bp TTGCTCTGTCCAGGCTCACTAAGGACCCTGAACTCAGTTAAAATACTTAGAAATGTGCATTCTGGCTTCTaGCTACCACTGTGTGTACTC +
Preference number: 5 (lower is better)
Translates to: LLCPGSLRTLNSVKILRNVHSGF*LPLCVL
Trigger: GAGTACACACAGTGGTAGCAAGAAGCCAGAATGCAC...ATTTCTAAGTATTTTAACTGAGTTCAGGGTCCTTAGTGAGCCTGGACAGAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CAA 90 bp GACGCCTTCATTATAAAGTGGGAGTGTTTGTACTCTCAGTACCTAGTCACTTCTTTCCAGGTTCTCATGTaGTCTAAACCAGAGAGGGAG +
Preference number: 5 (lower is better)
Translates to: DAFIIKWECLYSQYLVTSFQVLM*SKPERE
Trigger: CTCCCTCTCTGGTTTAGACAACATGAGAACCTGGAA...AGAAGTGACTAGGTACTGAGAGTACAAACACTCCCACTTTATAATGAAGGCGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CAA 90 bp GAGAGCCTTCAGTTTCAACTCGGAACTTTTAAAGGTCATGATTCAGCTGATCCTTTCCAGGTTCTCATGTaGTCTAAACCAGAGAGGGAG +
Preference number: 5 (lower is better)
Translates to: ESLQFQLGTFKGHDSADPFQVLM*SKPERE
Trigger: CTCCCTCTCTGGTTTAGACAACATGAGAACCTGGAA...AGGATCAGCTGAATCATGACCTTTAAAAGTTCCGAGTTGAAACTGAAGGCTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CAA 90 bp CAAAAACTACCTGTACTTTGTTTCCTTGAATCGTTATGCTTTTGCATAGCCATCGCTCAGGCAACGGGCTaGAGATGCTTCCTGAGTTCA +
Preference number: 5 (lower is better)
Translates to: QKLPVLCFLESLCFCIAIAQATG*RCFLSS
Trigger: TGAACTCAGGAAGCATCTCAAGCCCGTTGCCTGAGC...GATGGCTATGCAAAAGCATAACGATTCAAGGAAACAAAGTACAGGTAGTTTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CAA 90 bp AGGAAAAAGCCAGGTCTGAGGAGAGCCTTCAGTTTCAACTCGGAACTTTTAAAGCTTCTGCTCATCCACTaGGACATAGTCTACTCTTTG +
Preference number: 5 (lower is better)
Translates to: RKKPGLRRAFSFNSELLKLLLIH*DIVYSL
Trigger: CAAAGAGTAGACTATGTCCAAGTGGATGAGCAGAAG...CTTTAAAAGTTCCGAGTTGAAACTGAAGGCTCTCCTCAGACCTGGCTTTTTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CAA 90 bp GTAGGTGCTCAGAAGGATCAAGAATGGACACTAAATAACACTTCATGCCCAACTCTCTCATACTTTGGATaGCCTTTCATCCGTCCACTC +
Preference number: 5 (lower is better)
Translates to: VGAQKDQEWTLNNTSCPTLSYFG*PFIRPL
Trigger: GAGTGGACGGATGAAAGGCAATCCAAAGTATGAGAG...AGTTGGGCATGAAGTGTTATTTAGTGTCCATTCTTGATCCTTCTGAGCACCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CAA 90 bp CACATGTCTCCAAGGCTCACCCAATTAATCCATTTTGTCAAAATCCTCAGAGGACTCTCATACTTTGGATaGCCTTTCATCCGTCCACTC +
Preference number: 5 (lower is better)
Translates to: HMSPRLTQLIHFVKILRGLSYFG*PFIRPL
Trigger: GAGTGGACGGATGAAAGGCAATCCAAAGTATGAGAG...TCCTCTGAGGATTTTGACAAAATGGATTAATTGGGTGAGCCTTGGAGACATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CAA 90 bp TACTCTCAGTACCTAGTCACTTCTAAAGCAGAAGGGAGCAATTGGCTGGGAAACACTACACATTCTCTCTaGGTTTTGACCTGTGTTGAC +
Preference number: 5 (lower is better)
Translates to: YSQYLVTSKAEGSNWLGNTTHSL*VLTCVD
Trigger: GTCAACACAGGTCAAAACCAAGAGAGAATGTGTAGT...GTTTCCCAGCCAATTGCTCCCTTCTGCTTTAGAAGTGACTAGGTACTGAGAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CAA 90 bp TCATTTTGTGTCTGCAGGTGTTTCCCACATGTCTCCAAGGCTCACCCAATTAATAACGATAAAATCCTGTaGGTGGCAACACTCACTCCA +
Preference number: 5 (lower is better)
Translates to: SFCVCRCFPHVSKAHPINNDKIL*VATLTP
Trigger: TGGAGTGAGTGTTGCCACCAACAGGATTTTATCGTT...ATTAATTGGGTGAGCCTTGGAGACATGTGGGAAACACCTGCAGACACAAAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CAA 90 bp CTACTGATGGGAGAGTTCCAGTTGAACATCGCAGAAAGAAACCCTCACTTGACAATAAAGTGGGAGTGTTaGTACTCTCAGTACCTAGTC +
Preference number: 5 (lower is better)
Translates to: LLMGEFQLNIAERNPHLTIKWEC*YSQYLV
Trigger: GACTAGGTACTGAGAGTACAAACACTCCCACTTTAT...TGTCAAGTGAGGGTTTCTTTCTGCGATGTTCAACTGGAACTCTCCCATCAGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CAA 90 bp CTACTGATGGGAGAGTTCCAGTTGAACATCGCAGAAAGAAACCCTCACTTGACACCAGAACCTGCTTCTTaGAAAATCAAAACGGCTTCT +
Preference number: 5 (lower is better)
Translates to: LLMGEFQLNIAERNPHLTPEPAS*KIKTAS
Trigger: AGAAGCCGTTTTGATTTTCAAAGAAGCAGGTTCTGG...TGTCAAGTGAGGGTTTCTTTCTGCGATGTTCAACTGGAACTCTCCCATCAGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CAA 90 bp CTACTGATGGGAGAGTTCCAGTTGAACATCGCAGAAAGAAACCCTCACTTGACAGTACGGGAAGTAGTCTaGACAATGAACACGAAATTA +
Preference number: 5 (lower is better)
Translates to: LLMGEFQLNIAERNPHLTVREVV*TMNTKL
Trigger: TAATTTCGTGTTCATTGTCAAGACTACTTCCCGTAC...TGTCAAGTGAGGGTTTCTTTCTGCGATGTTCAACTGGAACTCTCCCATCAGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CAA 90 bp TTTTTAAGTAATCACATCCAAACAGGTCACACTACCCATGTGTGTTTCTTCATGTGTTTGGGTCATCTCTaGGCAAAGAGGAGCTGGCAG +
Preference number: 5 (lower is better)
Translates to: FLSNHIQTGHTTHVCFFMCLGHL*AKRSWQ
Trigger: CTGCCAGCTCCTCTTTGCCAAGAGATGACCCAAACA...CATGAAGAAACACACATGGGTAGTGTGACCTGTTTGGATGTGATTACTTAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CAA 90 bp TCTGGGATCATTTCTGTAACAAACATTAGGCCCTTGGTTAGAAACATAGCTCTCATGAACGGTCTGAGTTaGACCAGCTATCACATCTGG +
Preference number: 5 (lower is better)
Translates to: SGIISVTNIRPLVRNIALMNGLS*TSYHIW
Trigger: CCAGATGTGATAGCTGGTCAAACTCAGACCGTTCAT...GAGAGCTATGTTTCTAACCAAGGGCCTAATGTTTGTTACAGAAATGATCCCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CAA 90 bp TCAGAATTTCAGGTATTGGAGTCAAACGATAAAATCCTGTTGGTGGCAACACTCCTCTCATACTTTGGATaGCCTTTCATCCGTCCACTC +
Preference number: 5 (lower is better)
Translates to: SEFQVLESNDKILLVATLLSYFG*PFIRPL
Trigger: GAGTGGACGGATGAAAGGCAATCCAAAGTATGAGAG...GAGTGTTGCCACCAACAGGATTTTATCGTTTGACTCCAATACCTGAAATTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CAA 90 bp AACGATAAAATCCTGTTGGTGGCAACACTCACTCCAATCTTTGCTCCAATAGGAAACGATAAAATCCTGTaGGTGGCAACACTCACTCCA +
Preference number: 5 (lower is better)
Translates to: NDKILLVATLTPIFAPIGNDKIL*VATLTP
Trigger: TGGAGTGAGTGTTGCCACCAACAGGATTTTATCGTT...TCCTATTGGAGCAAAGATTGGAGTGAGTGTTGCCACCAACAGGATTTTATCGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS CCA 90 bp TTGCTCCACAGGGTAAGGAACCTTGATTTTTATCTACCTGAATGGTaGAACTTAAGGAACTTTCCAGCAATGGTGAAGAAGACAAGTGGT +
Preference number: 5 (lower is better)
Translates to: LLHRVRNLDFYLPEW*NLRNFPAMVKKTSG
Trigger: ACCACTTGTCTTCTTCACCATTGCTGGAAAGTTCCTTAAGTTCCACCATTCAGGTAGATAAAAATCAAGGTTCCTTACCCTGTGGAGCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CAA 90 bp CAAAAACTACCTGTACTTTGTTTCCTTGAATCGTTATGCTTTTGCATAGCCATCGTGCATTCTGGCTTCTaGCTACCACTGTGTGTACTC +
Preference number: 5 (lower is better)
Translates to: QKLPVLCFLESLCFCIAIVHSGF*LPLCVL
Trigger: GAGTACACACAGTGGTAGCAAGAAGCCAGAATGCAC...GATGGCTATGCAAAAGCATAACGATTCAAGGAAACAAAGTACAGGTAGTTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CAA 90 bp TTGCTCTGTCCAGGCTCACTAAGGACCCTGAACTCAGTTAAAATACTTAGAAATTTCAAACTAAGCCGCTaGTCTCGGTGTCTTAAGGAT +
Preference number: 5 (lower is better)
Translates to: LLCPGSLRTLNSVKILRNFKLSR*SRCLKD
Trigger: ATCCTTAAGACACCGAGACAAGCGGCTTAGTTTGAA...ATTTCTAAGTATTTTAACTGAGTTCAGGGTCCTTAGTGAGCCTGGACAGAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CAA 90 bp TCAGAATTTCAGGTATTGGAGTCAAACGATAAAATCCTGTTGGTGGCAACACTCTTCAAACTAAGCCGCTaGTCTCGGTGTCTTAAGGAT +
Preference number: 5 (lower is better)
Translates to: SEFQVLESNDKILLVATLFKLSR*SRCLKD
Trigger: ATCCTTAAGACACCGAGACAAGCGGCTTAGTTTGAA...GAGTGTTGCCACCAACAGGATTTTATCGTTTGACTCCAATACCTGAAATTCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CAA 90 bp TTGCTCTGTCCAGGCTCACTAAGGACCCTGAACTCAGTTAAAATACTTAGAAATCTTCTGCTCATCCACTaGGACATAGTCTACTCTTTG +
Preference number: 5 (lower is better)
Translates to: LLCPGSLRTLNSVKILRNLLLIH*DIVYSL
Trigger: CAAAGAGTAGACTATGTCCAAGTGGATGAGCAGAAG...ATTTCTAAGTATTTTAACTGAGTTCAGGGTCCTTAGTGAGCCTGGACAGAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CAA 90 bp TCAGAATTTCAGGTATTGGAGTCAAACGATAAAATCCTGTTGGTGGCAACACTCCATTCTCTCTTGGTTTaGACCTGTGTTGACCATCAG +
Preference number: 5 (lower is better)
Translates to: SEFQVLESNDKILLVATLHSLLV*TCVDHQ
Trigger: CTGATGGTCAACACAGGTCAAAACCAAGAGAGAATG...GAGTGTTGCCACCAACAGGATTTTATCGTTTGACTCCAATACCTGAAATTCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CAA 90 bp CATCCTCTAGCAGTTTTATCAAAGCAGGACATAATTGCCTACACTCTGGAAATGCATTCTCTCTTGGTTTaGACCTGTGTTGACCATCAG +
Preference number: 5 (lower is better)
Translates to: HPLAVLSKQDIIAYTLEMHSLLV*TCVDHQ
Trigger: CTGATGGTCAACACAGGTCAAAACCAAGAGAGAATG...CATTTCCAGAGTGTAGGCAATTATGTCCTGCTTTGATAAAACTGCTAGAGGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CAA 90 bp GCTCTCTCTCACACACACACATCGATCATCTCCACCAAAACCAATATTTTGACTACTACACATTCTCTCTaGGTTTTGACCTGTGTTGAC +
Preference number: 5 (lower is better)
Translates to: ALSHTHTSIISTKTNILTTTHSL*VLTCVD
Trigger: GTCAACACAGGTCAAAACCAAGAGAGAATGTGTAGT...AGTCAAAATATTGGTTTTGGTGGAGATGATCGATGTGTGTGTGTGAGAGAGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CAA 90 bp TACTCTCAGTACCTAGTCACTTCTAAAGCAGAAGGGAGCAATTGGCTGGGAAACGTCACTTGTCTTTCTTaGGGTATTGAAATGACTAGT +
Preference number: 5 (lower is better)
Translates to: YSQYLVTSKAEGSNWLGNVTCLS*GIEMTS
Trigger: ACTAGTCATTTCAATACCCAAAGAAAGACAAGTGAC...GTTTCCCAGCCAATTGCTCCCTTCTGCTTTAGAAGTGACTAGGTACTGAGAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CAA 90 bp TACTCTCAGTACCTAGTCACTTCTAAAGCAGAAGGGAGCAATTGGCTGGGAAACCTGTACTTTGTTTCCTaGAATCGTTATGCTTTTGCA +
Preference number: 5 (lower is better)
Translates to: YSQYLVTSKAEGSNWLGNLYFVS*NRYAFA
Trigger: TGCAAAAGCATAACGATTCAAGGAAACAAAGTACAG...GTTTCCCAGCCAATTGCTCCCTTCTGCTTTAGAAGTGACTAGGTACTGAGAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CAA 90 bp ATCGTTATGCTTTTGCATAGCCATCCTCTAGCAGTTTTATCAAAGCAGGACATAGGGTTAATTGCTGCATaGCCCTGTTATGCTGATTCC +
Preference number: 5 (lower is better)
Translates to: IVMLLHSHPLAVLSKQDIGLIAA*PCYADS
Trigger: GGAATCAGCATAACAGGGCAATGCAGCAATTAACCC...TATGTCCTGCTTTGATAAAACTGCTAGAGGATGGCTATGCAAAAGCATAACGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS CCA 90 bp CTTTTGCTCCACAGGGTAAGGAACCTTGATTTTTATCTACCTGAATaGTGGAACTTAAGGAACTTTCCAGCAATGGTGAAGAAGACAAGT +
Preference number: 5 (lower is better)
Translates to: LLLHRVRNLDFYLPE*WNLRNFPAMVKKTS
Trigger: ACTTGTCTTCTTCACCATTGCTGGAAAGTTCCTTAAGTTCCACCATTCAGGTAGATAAAAATCAAGGTTCCTTACCCTGTGGAGCAAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CAA 90 bp ATCGTTATGCTTTTGCATAGCCATCCTCTAGCAGTTTTATCAAAGCAGGACATAAATCTGGTGTGGTTCTaGACACTTGGGCCTACAATT +
Preference number: 5 (lower is better)
Translates to: IVMLLHSHPLAVLSKQDINLVWF*TLGPTI
Trigger: AATTGTAGGCCCAAGTGTCAAGAACCACACCAGATT...TATGTCCTGCTTTGATAAAACTGCTAGAGGATGGCTATGCAAAAGCATAACGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CAA 90 bp TTTTTAAGTAATCACATCCAAACAGGTCACACTACCCATGTGTGTTTCTTCATGCATTCTCTCTTGGTTTaGACCTGTGTTGACCATCAG +
Preference number: 5 (lower is better)
Translates to: FLSNHIQTGHTTHVCFFMHSLLV*TCVDHQ
Trigger: CTGATGGTCAACACAGGTCAAAACCAAGAGAGAATG...CATGAAGAAACACACATGGGTAGTGTGACCTGTTTGGATGTGATTACTTAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CAA 90 bp AACGATAAAATCCTGTTGGTGGCAACACTCACTCCAATCTTTGCTCCAATAGGAGTCACTTGTCTTTCTTaGGGTATTGAAATGACTAGT +
Preference number: 5 (lower is better)
Translates to: NDKILLVATLTPIFAPIGVTCLS*GIEMTS
Trigger: ACTAGTCATTTCAATACCCAAAGAAAGACAAGTGAC...TCCTATTGGAGCAAAGATTGGAGTGAGTGTTGCCACCAACAGGATTTTATCGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CAA 90 bp ATCGTTATGCTTTTGCATAGCCATCCTCTAGCAGTTTTATCAAAGCAGGACATAGGCCTGACTGCCAATTaGATCTATCCTCATAAAGAA +
Preference number: 5 (lower is better)
Translates to: IVMLLHSHPLAVLSKQDIGLTAN*IYPHKE
Trigger: TTCTTTATGAGGATAGATCAAATTGGCAGTCAGGCC...TATGTCCTGCTTTGATAAAACTGCTAGAGGATGGCTATGCAAAAGCATAACGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CAA 90 bp TTTTTAAGTAATCACATCCAAACAGGTCACACTACCCATGTGTGTTTCTTCATGAATCTGGTGTGGTTCTaGACACTTGGGCCTACAATT +
Preference number: 5 (lower is better)
Translates to: FLSNHIQTGHTTHVCFFMNLVWF*TLGPTI
Trigger: AATTGTAGGCCCAAGTGTCAAGAACCACACCAGATT...CATGAAGAAACACACATGGGTAGTGTGACCTGTTTGGATGTGATTACTTAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CAA 90 bp GGTGTTTCCCACATGTCTCCAAGGCTCACCCAATTAATCCATTTTGTCAAAATCCTGTACTTTGTTTCCTaGAATCGTTATGCTTTTGCA +
Preference number: 5 (lower is better)
Translates to: GVSHMSPRLTQLIHFVKILYFVS*NRYAFA
Trigger: TGCAAAAGCATAACGATTCAAGGAAACAAAGTACAG...GATTTTGACAAAATGGATTAATTGGGTGAGCCTTGGAGACATGTGGGAAACACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CAA 90 bp ATTCCATTTTTAAGTAATCACATCCAAACAGGTCACACTACCCATGTGTGTTTCATAAAGTGGGAGTGTTaGTACTCTCAGTACCTAGTC +
Preference number: 5 (lower is better)
Translates to: IPFLSNHIQTGHTTHVCFIKWEC*YSQYLV
Trigger: GACTAGGTACTGAGAGTACAAACACTCCCACTTTAT...GAAACACACATGGGTAGTGTGACCTGTTTGGATGTGATTACTTAAAAATGGAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CAA 90 bp TTTTTAAGTAATCACATCCAAACAGGTCACACTACCCATGTGTGTTTCTTCATGCCAGAACCTGCTTCTTaGAAAATCAAAACGGCTTCT +
Preference number: 5 (lower is better)
Translates to: FLSNHIQTGHTTHVCFFMPEPAS*KIKTAS
Trigger: AGAAGCCGTTTTGATTTTCAAAGAAGCAGGTTCTGG...CATGAAGAAACACACATGGGTAGTGTGACCTGTTTGGATGTGATTACTTAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS-3UTR CAA 90 bp TTTTTAAGTAATCACATCCAAACAGGTCACACTACCCATGTGTGTTTCTTCATGACAAACATTAGGCCCTaGGTTAGAAACATAGCTCTC +
Preference number: 5 (lower is better)
Translates to: FLSNHIQTGHTTHVCFFMTNIRP*VRNIAL
Trigger: GAGAGCTATGTTTCTAACCAAGGGCCTAATGTTTGT...CATGAAGAAACACACATGGGTAGTGTGACCTGTTTGGATGTGATTACTTAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369575.7
ENST00000424127.3
CDS GCA 72 bp TCCTGTAGTACTCCAAGACATCGGGGTTGCCGCTCATaGGGCCTCGCCGGAGGACAAACCAGCGCTTGCGCC +
Preference number: 6 (lower is better)
Translates to: SCSTPRHRGCRS*GLAGGQTSACA
Trigger: GGCGCAAGCGCTGGTTTGTCCTCCGGCGAGGCCGCATGAGCGGCAACCCCGATGTCTTGGAGTACTACAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
ENST00000496390.5
CDS TCA 72 bp GGGGCTGCTTCTCTTGCCTCGGCCCTGGACTGGAGATaGCCTGGAACACAAAGGCTCTGGCCTGCTGCATGG +
Preference number: 6 (lower is better)
Translates to: GAASLASALDWR*PGTQRLWPAAW
Trigger: CCATGCAGCAGGCCAGAGCCTTTGTGTTCCAGGTCATCTCCAGTCCAGGGCCGAGGCAAGAGAAGCAGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454973.1
CDS GCA 72 bp CCTGAGGCCTCGAGGATGGCACCTCCTGAGCTCCACTaGCATGGCATGAGGGGTGGACCAAATGACTGGAGG +
Preference number: 6 (lower is better)
Translates to: PEASRMAPPELH*HGMRGGPNDWR
Trigger: CCTCCAGTCATTTGGTCCACCCCTCATGCCATGGCAGTGGAGCTCAGGAGGTGCCATCCTCGAGGCCTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS GCA 72 bp GGAGGCCAGCACACTTCAGATGGGGGCTGCTTCTCTTaGCTCGGCCCTGGACTGGAGATGACCTGGAACACA +
Preference number: 6 (lower is better)
Translates to: GGQHTSDGGCFS*LGPGLEMTWNT
Trigger: TGTGTTCCAGGTCATCTCCAGTCCAGGGCCGAGGCAAGAGAAGCAGCCCCCATCTGAAGTGTGCTGGCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454973.1
CDS CAA 72 bp AGGAGGCCAGCACACTTCAGATGGGGGCTGCTTCTCTaGCCTCGGCCCTGGACTGGAGATGACCTGGAACAC +
Preference number: 6 (lower is better)
Translates to: RRPAHFRWGLLL*PRPWTGDDLEH
Trigger: GTGTTCCAGGTCATCTCCAGTCCAGGGCCGAGGCAAGAGAAGCAGCCCCCATCTGAAGTGTGCTGGCCTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454973.1
CDS GCA 72 bp AGTGCTTGTTCCTGTAGTACTCCAAGACATCGGGGTTaGCGCTCATGCGGCCTCGCCGGAGGACAAACCAGC +
Preference number: 6 (lower is better)
Translates to: SACSCSTPRHRG*RSCGLAGGQTS
Trigger: GCTGGTTTGTCCTCCGGCGAGGCCGCATGAGCGGCAACCCCGATGTCTTGGAGTACTACAGGAACAAGCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
ENST00000496390.5
CDS CCA 72 bp CACTTCAGATGGGGGCTGCTTCTCTTGCCTCGGCCCTaGACTGGAGATGACCTGGAACACAAAGGCTCTGGC +
Preference number: 6 (lower is better)
Translates to: HFRWGLLLLPRP*TGDDLEHKGSG
Trigger: GCCAGAGCCTTTGTGTTCCAGGTCATCTCCAGTCCAGGGCCGAGGCAAGAGAAGCAGCCCCCATCTGAAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454973.1
CDS GCA 72 bp CTTCCGAACAAAGCTGGGGCCCACATGCTTCCACACTaGACACTCGCTGAGGTCTATCACCCGGATGGGCTT +
Preference number: 6 (lower is better)
Translates to: LPNKAGAHMLPH*TLAEVYHPDGL
Trigger: AAGCCCATCCGGGTGATAGACCTCAGCGAGTGTGCAGTGTGGAAGCATGTGGGCCCCAGCTTTGTTCGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
ENST00000496390.5
CDS TCA 72 bp CACCATCCTCCAGGTGGCCAAGGTTGCAGACCTGACTaGTGCTGTGCACCCACACCTGCATTTCTTGCTCAG +
Preference number: 6 (lower is better)
Translates to: HHPPGGQGCRPD*CCAPTPAFLAQ
Trigger: CTGAGCAAGAAATGCAGGTGTGGGTGCACAGCATCAGTCAGGTCTGCAACCTTGGCCACCTGGAGGATGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
ENST00000496390.5
CDS GCA 72 bp GGACTGGAGATGACCTGGAACACAAAGGCTCTGGCCTaGTGCATGGGGGCTGGTGATGCTGAATTGAAGTCC +
Preference number: 6 (lower is better)
Translates to: GLEMTWNTKALA*CMGAGDAELKS
Trigger: GGACTTCAATTCAGCATCACCAGCCCCCATGCAGCAGGCCAGAGCCTTTGTGTTCCAGGTCATCTCCAGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454973.1
CDS CAA 72 bp TGGCTTCTTGCTACCACTGTGTGTACTCCACTCCTCTaGGCGCCGTTCAGACAGATGGCTTGGCTTAGGGGG +
Preference number: 6 (lower is better)
Translates to: WLLATTVCTPLL*APFRQMAWLRG
Trigger: CCCCCTAAGCCAAGCCATCTGTCTGAACGGCGCCAAGAGGAGTGGAGTACACACAGTGGTAGCAAGAAGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS CAA 90 bp TTGCAGGCAGCTCAGGCAACGGGCTTGAGATGCTTCCTGAGTTCATaGGAATGTAGTCATCAGGGCTGCAGTGGGGTCCAAGACCAGAGG +
Preference number: 6 (lower is better)
Translates to: LQAAQATGLRCFLSS*ECSHQGCSGVQDQR
Trigger: CCTCTGGTCTTGGACCCCACTGCAGCCCTGATGACTACATTCCAATGAACTCAGGAAGCATCTCAAGCCCGTTGCCTGAGCTGCCTGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
ENST00000496390.5
CDS CAA 90 bp TCACTGGGGGAGGTTCCAGGTTTGCAGGCAGCTCAGGCAACGGGCTaGAGATGCTTCCTGAGTTCATTGGAATGTAGTCATCAGGGCTGC +
Preference number: 6 (lower is better)
Translates to: SLGEVPGLQAAQATG*RCFLSSLECSHQGC
Trigger: GCAGCCCTGATGACTACATTCCAATGAACTCAGGAAGCATCTCAAGCCCGTTGCCTGAGCTGCCTGCAAACCTGGAACCTCCCCCAGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
ENST00000496390.5
CDS TCA 72 bp ATGGTGAAGAAGACAAGTGGTCCCTGGGTGGCCCATTaGTTTCTCTACTCCAGATCAGGGCAGCCTGAGGCC +
Preference number: 6 (lower is better)
Translates to: MVKKTSGPWVAH*FLYSRSGQPEA
Trigger: GGCCTCAGGCTGCCCTGATCTGGAGTAGAGAAATCAATGGGCCACCCAGGGACCACTTGTCTTCTTCACCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS TCA 72 bp GGTCCAGAGGAGGTGGCCGTGATTTCCTCTGAGGCTTaGGATCTCTATTCACTGGGGGAGGTTCCAGGTTTG +
Preference number: 6 (lower is better)
Translates to: GPEEVAVISSEA*DLYSLGEVPGL
Trigger: CAAACCTGGAACCTCCCCCAGTGAATAGAGATCTCAAGCCTCAGAGGAAATCACGGCCACCTCCTCTGGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
ENST00000496390.5
CDS GCA 72 bp TCGACTGCAAGGCACAGTGCGGGTCCTGGTAAGAGATaGATGTTCCCGGATGATCGAGAGGTTTCTCAGGTC +
Preference number: 6 (lower is better)
Translates to: STARHSAGPGKR*MFPDDREVSQV
Trigger: GACCTGAGAAACCTCTCGATCATCCGGGAACATGCATCTCTTACCAGGACCCGCACTGTGCCTTGCAGTCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
ENST00000496390.5
CDS CCA 72 bp CTCAGTGGCTACGGCATTAGTGTTTGGGTCATCTCTTaGCAAAGAGGAGCTGGCAGCATGGGCGGTAAGAAG +
Preference number: 6 (lower is better)
Translates to: LSGYGISVWVIS*QRGAGSMGGKK
Trigger: CTTCTTACCGCCCATGCTGCCAGCTCCTCTTTGCCAAGAGATGACCCAAACACTAATGCCGTAGCCACTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
ENST00000496390.5
CDS CAA 72 bp GCTCAGGCAACGGGCTTGAGATGCTTCCTGAGTTCATaGGAATGTAGTCATCAGGGCTGCAGTGGGGTCCAA +
Preference number: 6 (lower is better)
Translates to: AQATGLRCFLSS*ECSHQGCSGVQ
Trigger: TTGGACCCCACTGCAGCCCTGATGACTACATTCCAATGAACTCAGGAAGCATCTCAAGCCCGTTGCCTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
ENST00000496390.5
CDS CAA 90 bp CCAGAGAGGGAGATTCTTCTTGGAACCAGAGTGCATTCTGGCTTCTaGCTACCACTGTGTGTACTCCACTCCTCTTGGCGCCGTTCAGAC +
Preference number: 6 (lower is better)
Translates to: PEREILLGTRVHSGF*LPLCVLHSSWRRSD
Trigger: GTCTGAACGGCGCCAAGAGGAGTGGAGTACACACAGTGGTAGCAAGAAGCCAGAATGCACTCTGGTTCCAAGAAGAATCTCCCTCTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS CAA 90 bp CCCTGTTTCACACATGGCACAAGCCCGCACCTCTCATACTTTGGATaGCCTTTCATCCGTCCACTCCTGTTTTGTGCTCTGGAGAGCCTG +
Preference number: 6 (lower is better)
Translates to: PCFTHGTSPHLSYFG*PFIRPLLFCALESL
Trigger: CAGGCTCTCCAGAGCACAAAACAGGAGTGGACGGATGAAAGGCAATCCAAAGTATGAGAGGTGCGGGCTTGTGCCATGTGTGAAACAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
ENST00000496390.5
CDS GCA 72 bp CACATGGCACAAGCCCGCACCTCTCATACTTTGGATTaGCTTTCATCCGTCCACTCCTGTTTTGTGCTCTGG +
Preference number: 6 (lower is better)
Translates to: HMAQARTSHTLD*LSSVHSCFVLW
Trigger: CCAGAGCACAAAACAGGAGTGGACGGATGAAAGGCAATCCAAAGTATGAGAGGTGCGGGCTTGTGCCATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
ENST00000496390.5
CDS CCA 72 bp ACTCAAACTGAGCCCCAAGCTTCCCTGTTTCACACATaGCACAAGCCCGCACCTCTCATACTTTGGATTGCC +
Preference number: 6 (lower is better)
Translates to: TQTEPQASLFHT*HKPAPLILWIA
Trigger: GGCAATCCAAAGTATGAGAGGTGCGGGCTTGTGCCATGTGTGAAACAGGGAAGCTTGGGGCTCAGTTTGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
ENST00000496390.5
CDS CAA 90 bp AGCTTCCCTGTTTCACACATGGCACAAGCCCGCACCTCTCATACTTaGGATTGCCTTTCATCCGTCCACTCCTGTTTTGTGCTCTGGAGA +
Preference number: 6 (lower is better)
Translates to: SFPVSHMAQARTSHT*DCLSSVHSCFVLWR
Trigger: TCTCCAGAGCACAAAACAGGAGTGGACGGATGAAAGGCAATCCAAAGTATGAGAGGTGCGGGCTTGTGCCATGTGTGAAACAGGGAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
ENST00000496390.5
CDS GCA 72 bp AGATTCTTCTTGGAACCAGAGTGCATTCTGGCTTCTTaGTACCACTGTGTGTACTCCACTCCTCTTGGCGCC +
Preference number: 6 (lower is better)
Translates to: RFFLEPECILAS*YHCVYSTPLGA
Trigger: GGCGCCAAGAGGAGTGGAGTACACACAGTGGTAGCAAGAAGCCAGAATGCACTCTGGTTCCAAGAAGAATCT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS CCA 72 bp ACTTCTGGTTTCCTCAGTGGCTACGGCATTAGTGTTTaGGTCATCTCTTGGCAAAGAGGAGCTGGCAGCATG +
Preference number: 6 (lower is better)
Translates to: TSGFLSGYGISV*VISWQRGAGSM
Trigger: CATGCTGCCAGCTCCTCTTTGCCAAGAGATGACCCAAACACTAATGCCGTAGCCACTGAGGAAACCAGAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
ENST00000496390.5
CDS CAA 72 bp GAGATTCTTCTTGGAACCAGAGTGCATTCTGGCTTCTaGCTACCACTGTGTGTACTCCACTCCTCTTGGCGC +
Preference number: 6 (lower is better)
Translates to: EILLGTRVHSGF*LPLCVLHSSWR
Trigger: GCGCCAAGAGGAGTGGAGTACACACAGTGGTAGCAAGAAGCCAGAATGCACTCTGGTTCCAAGAAGAATCTC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS CAA 72 bp GAGGTTCCAGGTTTGCAGGCAGCTCAGGCAACGGGCTaGAGATGCTTCCTGAGTTCATTGGAATGTAGTCAT +
Preference number: 6 (lower is better)
Translates to: EVPGLQAAQATG*RCFLSSLECSH
Trigger: ATGACTACATTCCAATGAACTCAGGAAGCATCTCAAGCCCGTTGCCTGAGCTGCCTGCAAACCTGGAACCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
ENST00000496390.5
CDS CAA 72 bp ACACATGGCACAAGCCCGCACCTCTCATACTTTGGATaGCCTTTCATCCGTCCACTCCTGTTTTGTGCTCTG +
Preference number: 6 (lower is better)
Translates to: THGTSPHLSYFG*PFIRPLLFCAL
Trigger: CAGAGCACAAAACAGGAGTGGACGGATGAAAGGCAATCCAAAGTATGAGAGGTGCGGGCTTGTGCCATGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
ENST00000496390.5
CDS CAA 72 bp GTTTCACACATGGCACAAGCCCGCACCTCTCATACTTaGGATTGCCTTTCATCCGTCCACTCCTGTTTTGTG +
Preference number: 6 (lower is better)
Translates to: VSHMAQARTSHT*DCLSSVHSCFV
Trigger: CACAAAACAGGAGTGGACGGATGAAAGGCAATCCAAAGTATGAGAGGTGCGGGCTTGTGCCATGTGTGAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
ENST00000496390.5
CDS GCA 72 bp CTAAACCAGAGAGGGAGATTCTTCTTGGAACCAGAGTaGATTCTGGCTTCTTGCTACCACTGTGTGTACTCC +
Preference number: 6 (lower is better)
Translates to: LNQRGRFFLEPE*ILASCYHCVYS
Trigger: GGAGTACACACAGTGGTAGCAAGAAGCCAGAATGCACTCTGGTTCCAAGAAGAATCTCCCTCTCTGGTTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS CCA 72 bp TTCAAACTAAGCCGCTTGTCTCGGTGTCTTAAGGATTaGCCTTCTACATCAGCTGGTATGGTGCAGTCTTCC +
Preference number: 6 (lower is better)
Translates to: FKLSRLSRCLKD*PSTSAGMVQSS
Trigger: GGAAGACTGCACCATACCAGCTGATGTAGAAGGCCAATCCTTAAGACACCGAGACAAGCGGCTTAGTTTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496390.5
CDS CAA 72 bp GGGGAGAACCTGCATGGCAAATTCAAACTAAGCCGCTaGTCTCGGTGTCTTAAGGATTGGCCTTCTACATCA +
Preference number: 6 (lower is better)
Translates to: GENLHGKFKLSR*SRCLKDWPSTS
Trigger: TGATGTAGAAGGCCAATCCTTAAGACACCGAGACAAGCGGCTTAGTTTGAATTTGCCATGCAGGTTCTCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
ENST00000496390.5
CDS CAA 90 bp CTTTCCAGGTTCTCATGTTGTCTAAACCAGAGAGGGAGATTCTTCTaGGAACCAGAGTGCATTCTGGCTTCTTGCTACCACTGTGTGTAC +
Preference number: 6 (lower is better)
Translates to: LSRFSCCLNQRGRFF*EPECILASCYHCVY
Trigger: GTACACACAGTGGTAGCAAGAAGCCAGAATGCACTCTGGTTCCAAGAAGAATCTCCCTCTCTGGTTTAGACAACATGAGAACCTGGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS CAA 90 bp CAAAAACATCATCAAATGAAGCCTGTTCCAATGAACGGTCTGAGTTaGACCAGCTATCACATCTGGTGGGTAGACTGGTATGGTGCAGTC +
Preference number: 6 (lower is better)
Translates to: QKHHQMKPVPMNGLS*TSYHIWWVDWYGAV
Trigger: GACTGCACCATACCAGTCTACCCACCAGATGTGATAGCTGGTCAAACTCAGACCGTTCATTGGAACAGGCTTCATTTGATGATGTTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS CCA 72 bp TTCAAACTAAGCCGCTTGTCTCGGTGTCTTAAGGATTaGCCTTCTACATCAGCTTTCCAGGTTCTCATGTTG +
Preference number: 6 (lower is better)
Translates to: FKLSRLSRCLKD*PSTSAFQVLML
Trigger: CAACATGAGAACCTGGAAAGCTGATGTAGAAGGCCAATCCTTAAGACACCGAGACAAGCGGCTTAGTTTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3
CDS CAA 72 bp CATCAAATGAAGCCTGTTCCAATGAACGGTCTGAGTTaGACCAGCTATCACATCTGGTGGGTAGACTGGTAT +
Preference number: 6 (lower is better)
Translates to: HQMKPVPMNGLS*TSYHIWWVDWY
Trigger: ATACCAGTCTACCCACCAGATGTGATAGCTGGTCAAACTCAGACCGTTCATTGGAACAGGCTTCATTTGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369568.8
ENST00000369575.7
ENST00000424127.3