RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GAB2 (Homo sapiens)

Ensembl gene IDs: ENSG00000033327

Ensembl transcript IDs: ENST00000340149.6, ENST00000361507.5, ENST00000526030.1, ENST00000528329.1, ENST00000534823.1

Found 637 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AACACTGGGCCGGCACCAGGCCAGACTCGTTCCTACCCTGCGATCTaGCATACGCCACAGCCCATGGGCACAAGCTGTCAGCCATGCCTG +
Preference number: 1 (lower is better)
Translates to: NTGPAPGQTRSYPAI*HTPQPMGTSCQPCL
Trigger: CAGGCATGGCTGACAGCTTGTGCCCATGGGCTGTGGCGTATGTCAGATCGCAGGGTAGGAACGAGTCTGGCCTGGTGCCGGCCCAGTGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR GCA 90 bp CTGAGGAAACACTGGGCCGGCACCAGGCCAGACTCGTTCCTACCCTaGGATCTGACATACGCCACAGCCCATGGGCACAAGCTGTCAGCC +
Preference number: 1 (lower is better)
Translates to: LRKHWAGTRPDSFLP*DLTYATAHGHKLSA
Trigger: GGCTGACAGCTTGTGCCCATGGGCTGTGGCGTATGTCAGATCGCAGGGTAGGAACGAGTCTGGCCTGGTGCCGGCCCAGTGTTTCCTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR TCA 90 bp AAGATGGCTCCTGGAATGCTAGGGAGCAACAGAGGGCGGATGAGCTaGGGAAACACTGGGCCGGCACCAGGCCAGACTCGTTCCTACCCT +
Preference number: 1 (lower is better)
Translates to: KMAPGMLGSNRGRMS*GNTGPAPGQTRSYP
Trigger: AGGGTAGGAACGAGTCTGGCCTGGTGCCGGCCCAGTGTTTCCTCAGCTCATCCGCCCTCTGTTGCTCCCTAGCATTCCAGGAGCCATCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR CCA 90 bp TGGAATGCTAGGGAGCAACAGAGGGCGGATGAGCTGAGGAAACACTaGGCCGGCACCAGGCCAGACTCGTTCCTACCCTGCGATCTGACA +
Preference number: 1 (lower is better)
Translates to: WNAREQQRADELRKH*AGTRPDSFLPCDLT
Trigger: TGTCAGATCGCAGGGTAGGAACGAGTCTGGCCTGGTGCCGGCCCAGTGTTTCCTCAGCTCATCCGCCCTCTGTTGCTCCCTAGCATTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR CCA 90 bp GTCCTTCATCTTCTGCCTCTGCACCCCACAGCAGCTGTCCTGCCATaGCCTCAGCCTCAAAGTGGGTTCCCTGCAGATGTCAGCTTTCCC +
Preference number: 1 (lower is better)
Translates to: VLHLLPLHPTAAVLP*PQPQSGFPADVSFP
Trigger: GGGAAAGCTGACATCTGCAGGGAACCCACTTTGAGGCTGAGGCCATGGCAGGACAGCTGCTGTGGGGTGCAGAGGCAGAAGATGAAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR CCA 90 bp AGAGGAGGGAGTCTCCCCTTCAAGCAGCTGAGCACCAGCTGTGGATaGGACCTCAGCGCAGCTAATCCAACCTCCCATTCCACAGACAGG +
Preference number: 1 (lower is better)
Translates to: RGGSLPFKQLSTSCG*DLSAANPTSHSTDR
Trigger: CCTGTCTGTGGAATGGGAGGTTGGATTAGCTGCGCTGAGGTCCCATCCACAGCTGGTGCTCAGCTGCTTGAAGGGGAGACTCCCTCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR CCA 90 bp ACTAAGGTGGGTGGAGGCATGGCCATTACTGATAAAAATCACAGCTaGGCCCCGAGTGGGCAGAGGAGGTGCCTTGATCAGGCCCTCACC +
Preference number: 1 (lower is better)
Translates to: TKVGGGMAITDKNHS*APSGQRRCLDQALT
Trigger: GGTGAGGGCCTGATCAAGGCACCTCCTCTGCCCACTCGGGGCCCAGCTGTGATTTTTATCAGTAATGGCCATGCCTCCACCCACCTTAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR CCA 90 bp TCTGCACCCCACAGCAGCTGTCCTGCCATGGCCTCAGCCTCAAAGTaGGTTCCCTGCAGATGTCAGCTTTCCCTCTTCATCTGGGCATCT +
Preference number: 1 (lower is better)
Translates to: SAPHSSCPAMASASK*VPCRCQLSLFIWAS
Trigger: AGATGCCCAGATGAAGAGGGAAAGCTGACATCTGCAGGGAACCCACTTTGAGGCTGAGGCCATGGCAGGACAGCTGCTGTGGGGTGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR GCA 90 bp CTTTTGTCCTTCATCTTCTGCCTCTGCACCCCACAGCAGCTGTCCTaGCATGGCCTCAGCCTCAAAGTGGGTTCCCTGCAGATGTCAGCT +
Preference number: 1 (lower is better)
Translates to: LLSFIFCLCTPQQLS*HGLSLKVGSLQMSA
Trigger: AGCTGACATCTGCAGGGAACCCACTTTGAGGCTGAGGCCATGGCAGGACAGCTGCTGTGGGGTGCAGAGGCAGAAGATGAAGGACAAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR CCA 90 bp ATGTCAAGTGCTTTGAAGGCTGAGACTGGCAGAGTAGAGAGGAGGTaGATGGGAGGAAGAACGGGAGAGGGGAGAGGGGAGATGGGAAGG +
Preference number: 1 (lower is better)
Translates to: MSSALKAETGRVERR*MGGRTGEGRGEMGR
Trigger: CCTTCCCATCTCCCCTCTCCCCTCTCCCGTTCTTCCTCCCATCCACCTCCTCTCTACTCTGCCAGTCTCAGCCTTCAAAGCACTTGACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR CCA 90 bp CCCCCAACTCCCAGGCCCTTTGGATGTATTTCCCCACTTGCTACATaGCCTTCACCACTGCTTCACATCTGTCTGCTACCTCTGTGCCCG +
Preference number: 1 (lower is better)
Translates to: PPTPRPFGCISPLAT*PSPLLHICLLPLCP
Trigger: CGGGCACAGAGGTAGCAGACAGATGTGAAGCAGTGGTGAAGGCCATGTAGCAAGTGGGGAAATACATCCAAAGGGCCTGGGAGTTGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR CCA 90 bp GATGCCCTACACCCCGTCCCTGCTAATCTGATGGCCTTTCAAACCTaGGGAGGAGAGTCCAAGATGGCTCCTGGAATGCTAGGGAGCAAC +
Preference number: 1 (lower is better)
Translates to: DALHPVPANLMAFQT*GGESKMAPGMLGSN
Trigger: GTTGCTCCCTAGCATTCCAGGAGCCATCTTGGACTCTCCTCCCCAGGTTTGAAAGGCCATCAGATTAGCAGGGACGGGGTGTAGGGCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR TCA 90 bp TCTGACATACGCCACAGCCCATGGGCACAAGCTGTCAGCCATGCCTaGTGTGGTCCTCTAGGCATCATTCTGCCCTGCTTTCTCCTTGTC +
Preference number: 1 (lower is better)
Translates to: SDIRHSPWAQAVSHA*CGPLGIILPCFLLV
Trigger: GACAAGGAGAAAGCAGGGCAGAATGATGCCTAGAGGACCACATCAGGCATGGCTGACAGCTTGTGCCCATGGGCTGTGGCGTATGTCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR GCA 90 bp ACCACTGCTTCACATCTGTCTGCTACCTCTGTGCCCGACTTCCACTaGACTGCTCACTGCAAAGAAACTCACTTCCCGACCCCACTGCAG +
Preference number: 1 (lower is better)
Translates to: TTASHLSATSVPDFH*TAHCKETHFPTPLQ
Trigger: CTGCAGTGGGGTCGGGAAGTGAGTTTCTTTGCAGTGAGCAGTGCAGTGGAAGTCGGGCACAGAGGTAGCAGACAGATGTGAAGCAGTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR GCA 90 bp GGCCCTTTGGATGTATTTCCCCACTTGCTACATGGCCTTCACCACTaGTTCACATCTGTCTGCTACCTCTGTGCCCGACTTCCACTGCAC +
Preference number: 1 (lower is better)
Translates to: GPLDVFPHLLHGLHH*FTSVCYLCARLPLH
Trigger: GTGCAGTGGAAGTCGGGCACAGAGGTAGCAGACAGATGTGAAGCAGTGGTGAAGGCCATGTAGCAAGTGGGGAAATACATCCAAAGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR CCA 90 bp ATGCTCACATGTTTATGGGAGGCTGCAATAGTCTGGGCCCACTTGTaGCTGCTGCGGGTACAGGGAAGGCACCAGTTAAAAGCTCTGTCG +
Preference number: 1 (lower is better)
Translates to: MLTCLWEAAIVWAHL*LLRVQGRHQLKALS
Trigger: CGACAGAGCTTTTAACTGGTGCCTTCCCTGTACCCGCAGCAGCCACAAGTGGGCCCAGACTATTGCAGCCTCCCATAAACATGTGAGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR CCA 90 bp GGTCCACTCACATCATGGCACACTCAGAACATGCTCACATGTTTATaGGAGGCTGCAATAGTCTGGGCCCACTTGTGGCTGCTGCGGGTA +
Preference number: 1 (lower is better)
Translates to: GPLTSWHTQNMLTCL*EAAIVWAHLWLLRV
Trigger: TACCCGCAGCAGCCACAAGTGGGCCCAGACTATTGCAGCCTCCCATAAACATGTGAGCATGTTCTGAGTGTGCCATGATGTGAGTGGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR GCA 90 bp GCTACATGGCCTTCACCACTGCTTCACATCTGTCTGCTACCTCTGTaGCCGACTTCCACTGCACTGCTCACTGCAAAGAAACTCACTTCC +
Preference number: 1 (lower is better)
Translates to: ATWPSPLLHICLLPL*PTSTALLTAKKLTS
Trigger: GGAAGTGAGTTTCTTTGCAGTGAGCAGTGCAGTGGAAGTCGGGCACAGAGGTAGCAGACAGATGTGAAGCAGTGGTGAAGGCCATGTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR GCA 90 bp TTTCCCCACTTGCTACATGGCCTTCACCACTGCTTCACATCTGTCTaGTACCTCTGTGCCCGACTTCCACTGCACTGCTCACTGCAAAGA +
Preference number: 1 (lower is better)
Translates to: FPHLLHGLHHCFTSV*YLCARLPLHCSLQR
Trigger: TCTTTGCAGTGAGCAGTGCAGTGGAAGTCGGGCACAGAGGTAGCAGACAGATGTGAAGCAGTGGTGAAGGCCATGTAGCAAGTGGGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR GCA 90 bp AGGATGGGACTTAGAGAATGGCTAGGCCATTGGTCTGGTGAACTATaGATGCTCATGGGAGCTGAAAGGGGAATGGGGGCAGAGGACAGT +
Preference number: 1 (lower is better)
Translates to: RMGLREWLGHWSGEL*MLMGAERGMGAEDS
Trigger: ACTGTCCTCTGCCCCCATTCCCCTTTCAGCTCCCATGAGCATGCATAGTTCACCAGACCAATGGCCTAGCCATTCTCTAAGTCCCATCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR CCA 90 bp CACTTATTGGAACACCAAGGCATGGCCCCTACACTTCTGAGTGGCTaGACCCATATGCTCAAAGGCCTTTTGTTCCCAAGACACAAGGCT +
Preference number: 1 (lower is better)
Translates to: HLLEHQGMAPTLLSG*THMLKGLLFPRHKA
Trigger: AGCCTTGTGTCTTGGGAACAAAAGGCCTTTGAGCATATGGGTCCAGCCACTCAGAAGTGTAGGGGCCATGCCTTGGTGTTCCAATAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR CCA 90 bp CATTCACTTATTGGAACACCAAGGCATGGCCCCTACACTTCTGAGTaGCTGGACCCATATGCTCAAAGGCCTTTTGTTCCCAAGACACAA +
Preference number: 1 (lower is better)
Translates to: HSLIGTPRHGPYTSE*LDPYAQRPFVPKTQ
Trigger: TTGTGTCTTGGGAACAAAAGGCCTTTGAGCATATGGGTCCAGCCACTCAGAAGTGTAGGGGCCATGCCTTGGTGTTCCAATAAGTGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR TCA 90 bp CCTAAGTACTTCCTCTGCCCTCCATCAGCATTTGAAGTCTCTGTCTaGTGGCCATCACCACTGTCTCATGTCCTTGTCCTTTTTCTGATT +
Preference number: 1 (lower is better)
Translates to: PKYFLCPPSAFEVSV*WPSPLSHVLVLFLI
Trigger: AATCAGAAAAAGGACAAGGACATGAGACAGTGGTGATGGCCATCAGACAGAGACTTCAAATGCTGATGGAGGGCAGAGGAAGTACTTAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR TCA 90 bp CCCCAGAAACTGGAGACAGCAGCCATTAATAAATACTCCTTGAGTTaGTCTAAACTAATGCTAGGAGGAGAGGTGCAGCTCTTGAAGAAA +
Preference number: 1 (lower is better)
Translates to: PQKLETAAINKYSLS*SKLMLGGEVQLLKK
Trigger: TTTCTTCAAGAGCTGCACCTCTCCTCCTAGCATTAGTTTAGATCAACTCAAGGAGTATTTATTAATGGCTGCTGTCTCCAGTTTCTGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR TCA 90 bp TGTCCTTTTTCTGATTGTGGCTATCTTAAGTTCAGGGAGAAGGTCTaGTTGATTCTTGTGTCCTTAGTGCTTAACCCCAGAAACTGGAGA +
Preference number: 1 (lower is better)
Translates to: CPFSDCGYLKFREKV*LILVSLVLNPRNWR
Trigger: TCTCCAGTTTCTGGGGTTAAGCACTAAGGACACAAGAATCAATCAGACCTTCTCCCTGAACTTAAGATAGCCACAATCAGAAAAAGGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR-3UTR GCA 90 bp CGAGCTCCAAGCCCTGCTCCTTGCTGCTCTAGGTTGGCCATCAGTTTTCCCTTCGGCCAGCTCTGGAGATaGTGCCTCCTGGGCTCTGCG +
Preference number: 2 (lower is better)
Translates to: RAPSPAPCCSRLAISFPFGQLWR*CLLGSA
Trigger: CGCAGAGCCCAGGAGGCAGCATCTCCAGAGCTGGCC...GAAGGGAAAACTGATGGCCAACCTAGAGCAGCAAGGAGCAGGGCTTGGAGCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR-3UTR GCA 90 bp CATGCCACCATAAATCACATGACAGCCTGGATCTCTTGGGGACCCCCTCGGCAGGGGCCCACTTGTGGCTaGTGCGGGTACAGGGAAGGC +
Preference number: 2 (lower is better)
Translates to: HATINHMTAWISWGPPRQGPTCG*CGYREG
Trigger: GCCTTCCCTGTACCCGCAGCAGCCACAAGTGGGCCC...CTGCCGAGGGGGTCCCCAAGAGATCCAGGCTGTCATGTGATTTATGGTGGCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR-3UTR CCA 90 bp CCCTGCTTTCTCCTTGTCCTGCCTGACCCACTGTCCCATCCTAGGAACGGTCCTAGGGGAGAGGGGAGATaGGAAGGGCCAGCTCTGGAG +
Preference number: 2 (lower is better)
Translates to: PCFLLVLPDPLSHPRNGPRGEGR*EGPALE
Trigger: CTCCAGAGCTGGCCCTTCCCATCTCCCCTCTCCCCT...AGGACCGTTCCTAGGATGGGACAGTGGGTCAGGCAGGACAAGGAGAAAGCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR-3UTR TCA 90 bp GGGCCTAGAGTGGCCTGTAGCTCCAGAGTTCTGGGGACCCAGACCCCACAGTGTCTTGTCTTCTGGGACTaGAGGAGAGGTAGCCCAGTG +
Preference number: 2 (lower is better)
Translates to: GPRVACSSRVLGTQTPQCLVFWD*RRGSPV
Trigger: CACTGGGCTACCTCTCCTTCAGTCCCAGAAGACAAG...ACACTGTGGGGTCTGGGTCCCCAGAACTCTGGAGCTACAGGCCACTCTAGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR-3UTR TCA 90 bp GGGCCTAGAGTGGCCTGTAGCTCCAGAGTTCTGGGGACCCAGACCCCACAGTGTTGGTTTGCTGGTCCTTaGCTCCCTGGGTTGGTGAGA +
Preference number: 2 (lower is better)
Translates to: GPRVACSSRVLGTQTPQCWFAGP*LPGLVR
Trigger: TCTCACCAACCCAGGGAGTCAAGGACCAGCAAACCA...ACACTGTGGGGTCTGGGTCCCCAGAACTCTGGAGCTACAGGCCACTCTAGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR-3UTR TCA 90 bp CCCTGCTTTCTCCTTGTCCTGCCTGACCCACTGTCCCATCCTAGGAACGGTCCTCCTCAAGACCACTGCTaGGCCTCCGTCTCCACCATC +
Preference number: 2 (lower is better)
Translates to: PCFLLVLPDPLSHPRNGPPQDHC*ASVSTI
Trigger: GATGGTGGAGACGGAGGCTCAGCAGTGGTCTTGAGG...AGGACCGTTCCTAGGATGGGACAGTGGGTCAGGCAGGACAAGGAGAAAGCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR-3UTR GCA 90 bp TTTGTCCTTCATCTTCTGCCTCTGCACCCCACAGCAGCTGTCCTGCCATGGCCTCAGCTCTGGAGATGCTaGCTCCTGGGCTCTGCGGTG +
Preference number: 2 (lower is better)
Translates to: FVLHLLPLHPTAAVLPWPQLWRC*LLGSAV
Trigger: CACCGCAGAGCCCAGGAGGCAGCATCTCCAGAGCTG...AGGCCATGGCAGGACAGCTGCTGTGGGGTGCAGAGGCAGAAGATGAAGGACAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR-3UTR GCA 90 bp CATGCCACCATAAATCACATGACAGCCTGGATCTCTTGGGGACCCCCTCGGCAGCAGCTCTGGAGATGCTaGCTCCTGGGCTCTGCGGTG +
Preference number: 2 (lower is better)
Translates to: HATINHMTAWISWGPPRQQLWRC*LLGSAV
Trigger: CACCGCAGAGCCCAGGAGGCAGCATCTCCAGAGCTG...CTGCCGAGGGGGTCCCCAAGAGATCCAGGCTGTCATGTGATTTATGGTGGCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR-3UTR GCA 90 bp CTGTCCCATCCTAGGAACGGTCCTCATGTCACACCACCATGCACACCACTCTTGGGCCAGCTCTGGAGATaGTGCCTCCTGGGCTCTGCG +
Preference number: 2 (lower is better)
Translates to: LSHPRNGPHVTPPCTPLLGQLWR*CLLGSA
Trigger: CGCAGAGCCCAGGAGGCAGCATCTCCAGAGCTGGCC...CAAGAGTGGTGTGCATGGTGGTGTGACATGAGGACCGTTCCTAGGATGGGACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR-3UTR GCA 90 bp ACACCTCAGTCGCTCTCCGAAGATTCCAGCCAGGTCCACTCACATCATGGCACACCTCTGCCCAGCCTGTaGCTGTCCCAGGGTTCCCCT +
Preference number: 2 (lower is better)
Translates to: TPQSLSEDSSQVHSHHGTPLPSL*LSQGSP
Trigger: AGGGGAACCCTGGGACAGGCACAGGCTGGGCAGAGG...TGTGCCATGATGTGAGTGGACCTGGCTGGAATCTTCGGAGAGCGACTGAGGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR-3UTR GCA 90 bp ACACCTCAGTCGCTCTCCGAAGATTCCAGCCAGGTCCACTCACATCATGGCACAGGGCCCACTTGTGGCTaGTGCGGGTACAGGGAAGGC +
Preference number: 2 (lower is better)
Translates to: TPQSLSEDSSQVHSHHGTGPTCG*CGYREG
Trigger: GCCTTCCCTGTACCCGCAGCAGCCACAAGTGGGCCC...TGTGCCATGATGTGAGTGGACCTGGCTGGAATCTTCGGAGAGCGACTGAGGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR-3UTR TCA 90 bp CTGTCCCATCCTAGGAACGGTCCTCATGTCACACCACCATGCACACCACTCTTGGCAGAGGAGGTGCCTTaGTCAGGCCCTCACCTCCCA +
Preference number: 2 (lower is better)
Translates to: LSHPRNGPHVTPPCTPLLAEEVP*SGPHLP
Trigger: TGGGAGGTGAGGGCCTGATCAAGGCACCTCCTCTGC...CAAGAGTGGTGTGCATGGTGGTGTGACATGAGGACCGTTCCTAGGATGGGACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR-3UTR TCA 90 bp TTCTGGGGACCCAGACCCCACAGTGTCCTTGTCATCTCCACCACCCGAGCTCCAGACTCCCTGGGTTGGTaGGACTTGTCTTCTGGGACT +
Preference number: 2 (lower is better)
Translates to: FWGPRPHSVLVISTTRAPDSLGW*DLSSGT
Trigger: AGTCCCAGAAGACAAGTCTCACCAACCCAGGGAGTC...TGGAGCTCGGGTGGTGGAGATGACAAGGACACTGTGGGGTCTGGGTCCCCAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR-3UTR TCA 90 bp GCTTCACATCTGTCTGCTACCTCTGTGCCCGACTTCCACTGCACTGCTCACTGCCCTCAAGACCACTGCTaGGCCTCCGTCTCCACCATC +
Preference number: 2 (lower is better)
Translates to: ASHLSATSVPDFHCTAHCPQDHC*ASVSTI
Trigger: GATGGTGGAGACGGAGGCTCAGCAGTGGTCTTGAGG...GCAGTGAGCAGTGCAGTGGAAGTCGGGCACAGAGGTAGCAGACAGATGTGAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR-3UTR GCA 90 bp TCACTTATTGGAACACCAAGGCATGGCCCCTACACTTCTGAGTGGCTGGACCCACCTCTGCCCAGCCTGTaGCTGTCCCAGGGTTCCCCT +
Preference number: 2 (lower is better)
Translates to: SLIGTPRHGPYTSEWLDPPLPSL*LSQGSP
Trigger: AGGGGAACCCTGGGACAGGCACAGGCTGGGCAGAGG...TGGGTCCAGCCACTCAGAAGTGTAGGGGCCATGCCTTGGTGTTCCAATAAGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR-3UTR GCA 90 bp ACACCTCAGTCGCTCTCCGAAGATTCCAGCCAGGTCCACTCACATCATGGCACACACTGCAGAGTCCCCTaGACTGCCCTGTGCCTCTGC +
Preference number: 2 (lower is better)
Translates to: TPQSLSEDSSQVHSHHGTHCRVP*TALCLC
Trigger: GCAGAGGCACAGGGCAGTGCAGGGGACTCTGCAGTG...TGTGCCATGATGTGAGTGGACCTGGCTGGAATCTTCGGAGAGCGACTGAGGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR-3UTR CCA 90 bp GCTTCACATCTGTCTGCTACCTCTGTGCCCGACTTCCACTGCACTGCTCACTGCCCTGCCCCATGTGCTTaGTCGCCCAGCTTGGTCCAA +
Preference number: 2 (lower is better)
Translates to: ASHLSATSVPDFHCTAHCPAPCA*SPSLVQ
Trigger: TTGGACCAAGCTGGGCGACCAAGCACATGGGGCAGG...GCAGTGAGCAGTGCAGTGGAAGTCGGGCACAGAGGTAGCAGACAGATGTGAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR-3UTR TCA 90 bp ATGGGGAAGGAAGAACTCTGGAAATGGGATAGGGGTGCTGGGCCGAGATGTCCCAGAATCCACCTTCCCTaGTCCCCCACTCCTGCCTCT +
Preference number: 2 (lower is better)
Translates to: MGKEELWKWDRGAGPRCPRIHLP*SPTPAS
Trigger: AGAGGCAGGAGTGGGGGATCAGGGAAGGTGGATTCT...GGGACATCTCGGCCCAGCACCCCTATCCCATTTCCAGAGTTCTTCCTTCCCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR-3UTR GCA 90 bp AGAGTGGCCTGTAGCTCCAGAGTTCTGGGGACCCAGACCCCACAGTGTCCTTGTAGCCCTGCTCCTTGCTaGTCTAGGTTGGCCATCAGT +
Preference number: 2 (lower is better)
Translates to: RVACSSRVLGTQTPQCPCSPAPC*SRLAIS
Trigger: ACTGATGGCCAACCTAGAGCAGCAAGGAGCAGGGCT...ACAAGGACACTGTGGGGTCTGGGTCCCCAGAACTCTGGAGCTACAGGCCACTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR-3UTR GCA 90 bp ATGGGGAAGGAAGAACTCTGGAAATGGGATAGGGGTGCTGGGCCGAGATGTCCCCCAAGCCCTGCTCCTTaGTGCTCTAGGTTGGCCATC +
Preference number: 2 (lower is better)
Translates to: MGKEELWKWDRGAGPRCPPSPAP*CSRLAI
Trigger: GATGGCCAACCTAGAGCAGCAAGGAGCAGGGCTTGG...GGGACATCTCGGCCCAGCACCCCTATCCCATTTCCAGAGTTCTTCCTTCCCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR-3UTR GCA 90 bp ATGGGGAAGGAAGAACTCTGGAAATGGGATAGGGGTGCTGGGCCGAGATGTCCCCCTTCCCCTGTATGCTaGTTTCAAGGTGGGGCTGGC +
Preference number: 2 (lower is better)
Translates to: MGKEELWKWDRGAGPRCPPSPVC*FQGGAG
Trigger: GCCAGCCCCACCTTGAAAGCAGCATACAGGGGAAGG...GGGACATCTCGGCCCAGCACCCCTATCCCATTTCCAGAGTTCTTCCTTCCCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR-3UTR CCA 90 bp ATGGGGAAGGAAGAACTCTGGAAATGGGATAGGGGTGCTGGGCCGAGATGTCCCCCCTTGGGCCTAGAGTaGCCTGTAGCTCCAGAGTTC +
Preference number: 2 (lower is better)
Translates to: MGKEELWKWDRGAGPRCPPLGLE*PVAPEF
Trigger: GAACTCTGGAGCTACAGGCCACTCTAGGCCCAAGGG...GGGACATCTCGGCCCAGCACCCCTATCCCATTTCCAGAGTTCTTCCTTCCCCAT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR-3UTR CCA 90 bp TCACTTATTGGAACACCAAGGCATGGCCCCTACACTTCTGAGTGGCTGGACCCAATGCTGCTTTCAAGGTaGGGCTGGCGGGGGCCTCTG +
Preference number: 2 (lower is better)
Translates to: SLIGTPRHGPYTSEWLDPMLLSR*GWRGPL
Trigger: CAGAGGCCCCCGCCAGCCCCACCTTGAAAGCAGCAT...TGGGTCCAGCCACTCAGAAGTGTAGGGGCCATGCCTTGGTGTTCCAATAAGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR-3UTR CCA 90 bp ACACCTCAGTCGCTCTCCGAAGATTCCAGCCAGGTCCACTCACATCATGGCACACCTGCCCCATGTGCTTaGTCGCCCAGCTTGGTCCAA +
Preference number: 2 (lower is better)
Translates to: TPQSLSEDSSQVHSHHGTPAPCA*SPSLVQ
Trigger: TTGGACCAAGCTGGGCGACCAAGCACATGGGGCAGG...TGTGCCATGATGTGAGTGGACCTGGCTGGAATCTTCGGAGAGCGACTGAGGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR-3UTR TCA 90 bp ACACCTCAGTCGCTCTCCGAAGATTCCAGCCAGGTCCACTCACATCATGGCACAGCTGTCAGCCATGCCTaGTGTGGTCCTCTAGGCATC +
Preference number: 2 (lower is better)
Translates to: TPQSLSEDSSQVHSHHGTAVSHA*CGPLGI
Trigger: GATGCCTAGAGGACCACATCAGGCATGGCTGACAGC...TGTGCCATGATGTGAGTGGACCTGGCTGGAATCTTCGGAGAGCGACTGAGGTGT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR-3UTR TCA 90 bp ACCTCAGTCGCTCTCCGAAGATTCCAGCCAGGTCCACTCACATCATGGCACACTTCCTACCCTGCGATCTaGCATACGCCACAGCCCATG +
Preference number: 2 (lower is better)
Translates to: TSVALRRFQPGPLTSWHTSYPAI*HTPQPM
Trigger: CATGGGCTGTGGCGTATGTCAGATCGCAGGGTAGGA...AGTGTGCCATGATGTGAGTGGACCTGGCTGGAATCTTCGGAGAGCGACTGAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR-3UTR GCA 90 bp CATGCCACCATAAATCACATGACAGCCTGGATCTCTTGGGGACCCCCTCGGCAGTGTCTGCTACCTCTGTaGCCGACTTCCACTGCACTG +
Preference number: 2 (lower is better)
Translates to: HATINHMTAWISWGPPRQCLLPL*PTSTAL
Trigger: CAGTGCAGTGGAAGTCGGGCACAGAGGTAGCAGACA...CTGCCGAGGGGGTCCCCAAGAGATCCAGGCTGTCATGTGATTTATGGTGGCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR-3UTR GCA 90 bp CCCTGCTTTCTCCTTGTCCTGCCTGACCCACTGTCCCATCCTAGGAACGGTCCTCATGCACACCACTCTTaGACGTGTCCCTCCTTCACT +
Preference number: 2 (lower is better)
Translates to: PCFLLVLPDPLSHPRNGPHAHHS*TCPSFT
Trigger: AGTGAAGGAGGGACACGTGCAAGAGTGGTGTGCATG...AGGACCGTTCCTAGGATGGGACAGTGGGTCAGGCAGGACAAGGAGAAAGCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR-3UTR GCA 90 bp ATGGGGAAGGAAGAACTCTGGAAATGGGATAGGGGTGCTGGGCCGAGATGTCCCGCTTTCTCCTTGTCCTaGCTGACCCACTGTCCCATC +
Preference number: 2 (lower is better)
Translates to: MGKEELWKWDRGAGPRCPAFSLS*LTHCPI
Trigger: GATGGGACAGTGGGTCAGGCAGGACAAGGAGAAAGC...GGGACATCTCGGCCCAGCACCCCTATCCCATTTCCAGAGTTCTTCCTTCCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR-3UTR GCA 90 bp CATGCCACCATAAATCACATGACAGCCTGGATCTCTTGGGGACCCCCTCGGCAGGCTTTCTCCTTGTCCTaGCTGACCCACTGTCCCATC +
Preference number: 2 (lower is better)
Translates to: HATINHMTAWISWGPPRQAFSLS*LTHCPI
Trigger: GATGGGACAGTGGGTCAGGCAGGACAAGGAGAAAGC...CTGCCGAGGGGGTCCCCAAGAGATCCAGGCTGTCATGTGATTTATGGTGGCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR-3UTR CCA 90 bp ACACCTCAGTCGCTCTCCGAAGATTCCAGCCAGGTCCACTCACATCATGGCACAGTGAGGTGTGGAATCTaGCTCAGAGCCCCAGCCCTT +
Preference number: 2 (lower is better)
Translates to: TPQSLSEDSSQVHSHHGTVRCGI*LRAPAL
Trigger: AAGGGCTGGGGCTCTGAGCCAGATTCCACACCTCAC...TGTGCCATGATGTGAGTGGACCTGGCTGGAATCTTCGGAGAGCGACTGAGGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR-3UTR CCA 90 bp GCTTCACATCTGTCTGCTACCTCTGTGCCCGACTTCCACTGCACTGCTCACTGCGCCTCAGCCTCAAAGTaGGTTCCCTGCAGATGTCAG +
Preference number: 2 (lower is better)
Translates to: ASHLSATSVPDFHCTAHCASASK*VPCRCQ
Trigger: CTGACATCTGCAGGGAACCCACTTTGAGGCTGAGGC...GCAGTGAGCAGTGCAGTGGAAGTCGGGCACAGAGGTAGCAGACAGATGTGAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR-3UTR CCA 90 bp ATGGGGAAGGAAGAACTCTGGAAATGGGATAGGGGTGCTGGGCCGAGATGTCCCAGCACCAGCTGTGGATaGGACCTCAGCGCAGCTAAT +
Preference number: 2 (lower is better)
Translates to: MGKEELWKWDRGAGPRCPSTSCG*DLSAAN
Trigger: ATTAGCTGCGCTGAGGTCCCATCCACAGCTGGTGCT...GGGACATCTCGGCCCAGCACCCCTATCCCATTTCCAGAGTTCTTCCTTCCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR-3UTR GCA 90 bp CTGTCCCATCCTAGGAACGGTCCTCATGTCACACCACCATGCACACCACTCTTGAGCCCTGCTCCTTGCTaGTCTAGGTTGGCCATCAGT +
Preference number: 2 (lower is better)
Translates to: LSHPRNGPHVTPPCTPLLSPAPC*SRLAIS
Trigger: ACTGATGGCCAACCTAGAGCAGCAAGGAGCAGGGCT...CAAGAGTGGTGTGCATGGTGGTGTGACATGAGGACCGTTCCTAGGATGGGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR-3UTR GCA 90 bp TCACTTATTGGAACACCAAGGCATGGCCCCTACACTTCTGAGTGGCTGGACCCACCTTCCCCTGTATGCTaGTTTCAAGGTGGGGCTGGC +
Preference number: 2 (lower is better)
Translates to: SLIGTPRHGPYTSEWLDPPSPVC*FQGGAG
Trigger: GCCAGCCCCACCTTGAAAGCAGCATACAGGGGAAGG...TGGGTCCAGCCACTCAGAAGTGTAGGGGCCATGCCTTGGTGTTCCAATAAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR-3UTR GCA 90 bp CATGCCACCATAAATCACATGACAGCCTGGATCTCTTGGGGACCCCCTCGGCAGTTTACCATGTGTTCCTaGCCCATGTGCTTGGTCGCC +
Preference number: 2 (lower is better)
Translates to: HATINHMTAWISWGPPRQFTMCS*PMCLVA
Trigger: GGCGACCAAGCACATGGGGCAGGAACACATGGTAAA...CTGCCGAGGGGGTCCCCAAGAGATCCAGGCTGTCATGTGATTTATGGTGGCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR-3UTR GCA 90 bp ACACCAACCTCCCTAAGTACTTCCTCTGCCCTCCATCAGCATTTGAAGTCTCTGCACTGCAGAGTCCCCTaGACTGCCCTGTGCCTCTGC +
Preference number: 2 (lower is better)
Translates to: TPTSLSTSSALHQHLKSLHCRVP*TALCLC
Trigger: GCAGAGGCACAGGGCAGTGCAGGGGACTCTGCAGTG...CAGAGACTTCAAATGCTGATGGAGGGCAGAGGAAGTACTTAGGGAGGTTGGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR-3UTR CCA 90 bp ACACCTCAGTCGCTCTCCGAAGATTCCAGCCAGGTCCACTCACATCATGGCACAACTGAACGTGAGGTGTaGAATCTGGCTCAGAGCCCC +
Preference number: 2 (lower is better)
Translates to: TPQSLSEDSSQVHSHHGTTEREV*NLAQSP
Trigger: GGGGCTCTGAGCCAGATTCCACACCTCACGTTCAGT...TGTGCCATGATGTGAGTGGACCTGGCTGGAATCTTCGGAGAGCGACTGAGGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR-3UTR TCA 90 bp TGTATTTCCCCACTTGCTACATGGCCTTCACCACTGCTTCACATCTGTCTGCTAGCAGAGGAGGTGCCTTaGTCAGGCCCTCACCTCCCA +
Preference number: 2 (lower is better)
Translates to: CISPLATWPSPLLHICLLAEEVP*SGPHLP
Trigger: TGGGAGGTGAGGGCCTGATCAAGGCACCTCCTCTGC...TAGCAGACAGATGTGAAGCAGTGGTGAAGGCCATGTAGCAAGTGGGGAAATACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR-3UTR TCA 90 bp CTGCTACCTCTGTGCCCGACTTCCACTGCACTGCTCACTGCAAAGAAACTCACTGACTCCCTGGGTTGGTaGGACTTGTCTTCTGGGACT +
Preference number: 2 (lower is better)
Translates to: LLPLCPTSTALLTAKKLTDSLGW*DLSSGT
Trigger: AGTCCCAGAAGACAAGTCTCACCAACCCAGGGAGTC...AGTGAGTTTCTTTGCAGTGAGCAGTGCAGTGGAAGTCGGGCACAGAGGTAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR-3UTR TCA 90 bp TCACTTATTGGAACACCAAGGCATGGCCCCTACACTTCTGAGTGGCTGGACCCACCGTCCCTGCTAATCTaGTGGCCTTTCAAACCTGGG +
Preference number: 2 (lower is better)
Translates to: SLIGTPRHGPYTSEWLDPPSLLI*WPFKPG
Trigger: CCCAGGTTTGAAAGGCCATCAGATTAGCAGGGACGG...TGGGTCCAGCCACTCAGAAGTGTAGGGGCCATGCCTTGGTGTTCCAATAAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR-3UTR GCA 90 bp AGAGTGGCCTGTAGCTCCAGAGTTCTGGGGACCCAGACCCCACAGTGTCCTTGTTTATCCACTTTGGTTTaGTGGTCCTTGACTCCCTGG +
Preference number: 2 (lower is better)
Translates to: RVACSSRVLGTQTPQCPCLSTLV*WSLTPW
Trigger: CCAGGGAGTCAAGGACCAGCAAACCAAAGTGGATAA...ACAAGGACACTGTGGGGTCTGGGTCCCCAGAACTCTGGAGCTACAGGCCACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR-3UTR GCA 90 bp TGTAGCTACCACCACTGCTTCCATTCACTTATTGGAACACCAAGGCATGGCCCCTGTTCCTGCCCCATGTaGTTGGTCGCCCAGCTTGGT +
Preference number: 2 (lower is better)
Translates to: CSYHHCFHSLIGTPRHGPCSCPM*LVAQLG
Trigger: ACCAAGCTGGGCGACCAAGCACATGGGGCAGGAACA...GGGGCCATGCCTTGGTGTTCCAATAAGTGAATGGAAGCAGTGGTGGTAGCTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR-3UTR GCA 90 bp ACCTCAGTCGCTCTCCGAAGATTCCAGCCAGGTCCACTCACATCATGGCACACTACAAGCTGTCAGCCATaGCTGATGTGGTCCTCTAGG +
Preference number: 2 (lower is better)
Translates to: TSVALRRFQPGPLTSWHTTSCQP*LMWSSR
Trigger: CCTAGAGGACCACATCAGGCATGGCTGACAGCTTGT...AGTGTGCCATGATGTGAGTGGACCTGGCTGGAATCTTCGGAGAGCGACTGAGGT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR-3UTR GCA 90 bp CATGCCACCATAAATCACATGACAGCCTGGATCTCTTGGGGACCCCCTCGGCAGGTGGCTGGACCCATATaGTCAAAGGCCTTTTGTTCC +
Preference number: 2 (lower is better)
Translates to: HATINHMTAWISWGPPRQVAGPI*SKAFCS
Trigger: GGAACAAAAGGCCTTTGAGCATATGGGTCCAGCCAC...CTGCCGAGGGGGTCCCCAAGAGATCCAGGCTGTCATGTGATTTATGGTGGCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR-3UTR CCA 90 bp TGTATTTCCCCACTTGCTACATGGCCTTCACCACTGCTTCACATCTGTCTGCTAAGGGGAGAGGGGAGATaGGAAGGGCCAGCTCTGGAG +
Preference number: 2 (lower is better)
Translates to: CISPLATWPSPLLHICLLRGEGR*EGPALE
Trigger: CTCCAGAGCTGGCCCTTCCCATCTCCCCTCTCCCCT...TAGCAGACAGATGTGAAGCAGTGGTGAAGGCCATGTAGCAAGTGGGGAAATACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR-3UTR CCA 90 bp TCACTTATTGGAACACCAAGGCATGGCCCCTACACTTCTGAGTGGCTGGACCCAACTGAACGTGAGGTGTaGAATCTGGCTCAGAGCCCC +
Preference number: 2 (lower is better)
Translates to: SLIGTPRHGPYTSEWLDPTEREV*NLAQSP
Trigger: GGGGCTCTGAGCCAGATTCCACACCTCACGTTCAGT...TGGGTCCAGCCACTCAGAAGTGTAGGGGCCATGCCTTGGTGTTCCAATAAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR-3UTR CCA 90 bp GTATTTCCCCACTTGCTACATGGCCTTCACCACTGCTTCACATCTGTCTGCTACGCAGCTGTCCTGCCATaGCCTCAGCCTCAAAGTGGG +
Preference number: 2 (lower is better)
Translates to: VFPHLLHGLHHCFTSVCYAAVLP*PQPQSG
Trigger: CCCACTTTGAGGCTGAGGCCATGGCAGGACAGCTGC...GTAGCAGACAGATGTGAAGCAGTGGTGAAGGCCATGTAGCAAGTGGGGAAATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR-3UTR CCA 90 bp GCCTCTGACACCAACCTCCCTAAGTACTTCCTCTGCCCTCCATCAGCATTTGAAGTAGCTCCAGAGTTCTaGGGACCCAGACCCCACAGT +
Preference number: 2 (lower is better)
Translates to: ASDTNLPKYFLCPPSAFEVAPEF*GPRPHS
Trigger: ACTGTGGGGTCTGGGTCCCCAGAACTCTGGAGCTAC...TTCAAATGCTGATGGAGGGCAGAGGAAGTACTTAGGGAGGTTGGTGTCAGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR-3UTR CCA 90 bp TGTAGCTACCACCACTGCTTCCATTCACTTATTGGAACACCAAGGCATGGCCCCCTTGGTCGCCCAGCTTaGTCCAAGCCTTCCCCTGTA +
Preference number: 2 (lower is better)
Translates to: CSYHHCFHSLIGTPRHGPLGRPA*SKPSPV
Trigger: TACAGGGGAAGGCTTGGACCAAGCTGGGCGACCAAG...GGGGCCATGCCTTGGTGTTCCAATAAGTGAATGGAAGCAGTGGTGGTAGCTACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR-3UTR CCA 90 bp TGCTTTCTCCTTGTCCTGCCTGACCCACTGTCCCATCCTAGGAACGGTCCTCATTCCCCACTTGCTACATaGCCTTCACCACTGCTTCAC +
Preference number: 2 (lower is better)
Translates to: CFLLVLPDPLSHPRNGPHSPLAT*PSPLLH
Trigger: GTGAAGCAGTGGTGAAGGCCATGTAGCAAGTGGGGA...ATGAGGACCGTTCCTAGGATGGGACAGTGGGTCAGGCAGGACAAGGAGAAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR-3UTR CCA 90 bp ATGGGGAAGGAAGAACTCTGGAAATGGGATAGGGGTGCTGGGCCGAGATGTCCCACACTTCTGAGTGGCTaGACCCATATGCTCAAAGGC +
Preference number: 2 (lower is better)
Translates to: MGKEELWKWDRGAGPRCPTLLSG*THMLKG
Trigger: GCCTTTGAGCATATGGGTCCAGCCACTCAGAAGTGT...GGGACATCTCGGCCCAGCACCCCTATCCCATTTCCAGAGTTCTTCCTTCCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR CAA 90 bp AACATGCTCACATGTTTATGGGAGGCTGCAATAGTCTGGGCCCACTaGTGGCTGCTGCGGGTACAGGGAAGGCACCAGTTAAAAGCTCTG +
Preference number: 2 (lower is better)
Translates to: NMLTCLWEAAIVWAH*WLLRVQGRHQLKAL
Trigger: CAGAGCTTTTAACTGGTGCCTTCCCTGTACCCGCAGCAGCCACAAGTGGGCCCAGACTATTGCAGCCTCCCATAAACATGTGAGCATGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR-3UTR GCA 90 bp TCACTTATTGGAACACCAAGGCATGGCCCCTACACTTCTGAGTGGCTGGACCCAAAGCCTTCCCCTGTATaGTGCTTTCAAGGTGGGGCT +
Preference number: 2 (lower is better)
Translates to: SLIGTPRHGPYTSEWLDPKPSPV*CFQGGA
Trigger: AGCCCCACCTTGAAAGCAGCATACAGGGGAAGGCTT...TGGGTCCAGCCACTCAGAAGTGTAGGGGCCATGCCTTGGTGTTCCAATAAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR-3UTR GCA 90 bp TCACTTATTGGAACACCAAGGCATGGCCCCTACACTTCTGAGTGGCTGGACCCAGTGCCCGACTTCCACTaGACTGCTCACTGCAAAGAA +
Preference number: 2 (lower is better)
Translates to: SLIGTPRHGPYTSEWLDPVPDFH*TAHCKE
Trigger: TTCTTTGCAGTGAGCAGTGCAGTGGAAGTCGGGCAC...TGGGTCCAGCCACTCAGAAGTGTAGGGGCCATGCCTTGGTGTTCCAATAAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR-3UTR GCA 90 bp GCCTCTGACACCAACCTCCCTAAGTACTTCCTCTGCCCTCCATCAGCATTTGAACTTTCTGCTCCACCCTaGACCCCCAAGGATTGCGTT +
Preference number: 2 (lower is better)
Translates to: ASDTNLPKYFLCPPSAFELSAPP*TPKDCV
Trigger: AACGCAATCCTTGGGGGTGCAGGGTGGAGCAGAAAG...TTCAAATGCTGATGGAGGGCAGAGGAAGTACTTAGGGAGGTTGGTGTCAGAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR-3UTR CCA 90 bp GCCTCTGACACCAACCTCCCTAAGTACTTCCTCTGCCCTCCATCAGCATTTGAAGATAAAAATCACAGCTaGGCCCCGAGTGGGCAGAGG +
Preference number: 2 (lower is better)
Translates to: ASDTNLPKYFLCPPSAFEDKNHS*APSGQR
Trigger: CCTCTGCCCACTCGGGGCCCAGCTGTGATTTTTATC...TTCAAATGCTGATGGAGGGCAGAGGAAGTACTTAGGGAGGTTGGTGTCAGAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR-3UTR CCA 90 bp TGCTTTCTCCTTGTCCTGCCTGACCCACTGTCCCATCCTAGGAACGGTCCTCATCTTGCTGCTCTAGGTTaGCCATCAGTTTTCCCTTCC +
Preference number: 2 (lower is better)
Translates to: CFLLVLPDPLSHPRNGPHLAALG*PSVFPS
Trigger: GGAAGGGAAAACTGATGGCCAACCTAGAGCAGCAAG...ATGAGGACCGTTCCTAGGATGGGACAGTGGGTCAGGCAGGACAAGGAGAAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR-3UTR CCA 90 bp ATGGGGAAGGAAGAACTCTGGAAATGGGATAGGGGTGCTGGGCCGAGATGTCCCGAATGGCTAGGCCATTaGTCTGGTGAACTATGCATG +
Preference number: 2 (lower is better)
Translates to: MGKEELWKWDRGAGPRCPEWLGH*SGELCM
Trigger: CATGCATAGTTCACCAGACCAATGGCCTAGCCATTC...GGGACATCTCGGCCCAGCACCCCTATCCCATTTCCAGAGTTCTTCCTTCCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR-3UTR CCA 90 bp CATGCCACCATAAATCACATGACAGCCTGGATCTCTTGGGGACCCCCTCGGCAGGAATGGCTAGGCCATTaGTCTGGTGAACTATGCATG +
Preference number: 2 (lower is better)
Translates to: HATINHMTAWISWGPPRQEWLGH*SGELCM
Trigger: CATGCATAGTTCACCAGACCAATGGCCTAGCCATTC...CTGCCGAGGGGGTCCCCAAGAGATCCAGGCTGTCATGTGATTTATGGTGGCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR-3UTR TCA 90 bp CTGCTACCTCTGTGCCCGACTTCCACTGCACTGCTCACTGCAAAGAAACTCACTAAGTGCTTTGAAGGCTaGGACTGGCAGAGTAGAGAG +
Preference number: 2 (lower is better)
Translates to: LLPLCPTSTALLTAKKLTKCFEG*DWQSRE
Trigger: CTCTCTACTCTGCCAGTCTCAGCCTTCAAAGCACTT...AGTGAGTTTCTTTGCAGTGAGCAGTGCAGTGGAAGTCGGGCACAGAGGTAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR-3UTR TCA 90 bp GTATTTCCCCACTTGCTACATGGCCTTCACCACTGCTTCACATCTGTCTGCTACTGGTTTGCTGGTCCTTaGCTCCCTGGGTTGGTGAGA +
Preference number: 2 (lower is better)
Translates to: VFPHLLHGLHHCFTSVCYWFAGP*LPGLVR
Trigger: TCTCACCAACCCAGGGAGTCAAGGACCAGCAAACCA...GTAGCAGACAGATGTGAAGCAGTGGTGAAGGCCATGTAGCAAGTGGGGAAATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR-3UTR TCA 90 bp TGTAGCTACCACCACTGCTTCCATTCACTTATTGGAACACCAAGGCATGGCCCCAGGCCATTGGTCTGGTaGACTATGCATGCTCATGGG +
Preference number: 2 (lower is better)
Translates to: CSYHHCFHSLIGTPRHGPRPLVW*TMHAHG
Trigger: CCCATGAGCATGCATAGTTCACCAGACCAATGGCCT...GGGGCCATGCCTTGGTGTTCCAATAAGTGAATGGAAGCAGTGGTGGTAGCTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR-3UTR GCA 90 bp TCACTTATTGGAACACCAAGGCATGGCCCCTACACTTCTGAGTGGCTGGACCCACATGGCCTTCACCACTaGTTCACATCTGTCTGCTAC +
Preference number: 2 (lower is better)
Translates to: SLIGTPRHGPYTSEWLDPHGLHH*FTSVCY
Trigger: GTAGCAGACAGATGTGAAGCAGTGGTGAAGGCCATG...TGGGTCCAGCCACTCAGAAGTGTAGGGGCCATGCCTTGGTGTTCCAATAAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR-3UTR CCA 90 bp TTTGTCCTTCATCTTCTGCCTCTGCACCCCACAGCAGCTGTCCTGCCATGGCCTAGGTGGGTGGAGGCATaGCCATTACTGATAAAAATC +
Preference number: 2 (lower is better)
Translates to: FVLHLLPLHPTAAVLPWPRWVEA*PLLIKI
Trigger: GATTTTTATCAGTAATGGCCATGCCTCCACCCACCT...AGGCCATGGCAGGACAGCTGCTGTGGGGTGCAGAGGCAGAAGATGAAGGACAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR-3UTR CCA 90 bp TGTATTTCCCCACTTGCTACATGGCCTTCACCACTGCTTCACATCTGTCTGCTAGTGAGGTGTGGAATCTaGCTCAGAGCCCCAGCCCTT +
Preference number: 2 (lower is better)
Translates to: CISPLATWPSPLLHICLLVRCGI*LRAPAL
Trigger: AAGGGCTGGGGCTCTGAGCCAGATTCCACACCTCAC...TAGCAGACAGATGTGAAGCAGTGGTGAAGGCCATGTAGCAAGTGGGGAAATACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR-3UTR CCA 90 bp TTTGTCCTTCATCTTCTGCCTCTGCACCCCACAGCAGCTGTCCTGCCATGGCCTCTTTCCCTCTTCATCTaGGCATCTAAGTCCTTTACC +
Preference number: 2 (lower is better)
Translates to: FVLHLLPLHPTAAVLPWPLSLFI*ASKSFT
Trigger: GGTAAAGGACTTAGATGCCCAGATGAAGAGGGAAAG...AGGCCATGGCAGGACAGCTGCTGTGGGGTGCAGAGGCAGAAGATGAAGGACAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR-3UTR CCA 90 bp GTATTTCCCCACTTGCTACATGGCCTTCACCACTGCTTCACATCTGTCTGCTACGCCTCAGCCTCAAAGTaGGTTCCCTGCAGATGTCAG +
Preference number: 2 (lower is better)
Translates to: VFPHLLHGLHHCFTSVCYASASK*VPCRCQ
Trigger: CTGACATCTGCAGGGAACCCACTTTGAGGCTGAGGC...GTAGCAGACAGATGTGAAGCAGTGGTGAAGGCCATGTAGCAAGTGGGGAAATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR-3UTR CCA 90 bp ACACCTCAGTCGCTCTCCGAAGATTCCAGCCAGGTCCACTCACATCATGGCACACTTCCATTCACTTATTaGAACACCAAGGCATGGCCC +
Preference number: 2 (lower is better)
Translates to: TPQSLSEDSSQVHSHHGTLPFTY*NTKAWP
Trigger: GGGCCATGCCTTGGTGTTCCAATAAGTGAATGGAAG...TGTGCCATGATGTGAGTGGACCTGGCTGGAATCTTCGGAGAGCGACTGAGGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR-3UTR GCA 90 bp ACACCAACCTCCCTAAGTACTTCCTCTGCCCTCCATCAGCATTTGAAGTCTCTGGTGCCCGACTTCCACTaGACTGCTCACTGCAAAGAA +
Preference number: 2 (lower is better)
Translates to: TPTSLSTSSALHQHLKSLVPDFH*TAHCKE
Trigger: TTCTTTGCAGTGAGCAGTGCAGTGGAAGTCGGGCAC...CAGAGACTTCAAATGCTGATGGAGGGCAGAGGAAGTACTTAGGGAGGTTGGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR-3UTR GCA 90 bp GCCTCTGACACCAACCTCCCTAAGTACTTCCTCTGCCCTCCATCAGCATTTGAACTGGTGAACTATGCATaGTCATGGGAGCTGAAAGGG +
Preference number: 2 (lower is better)
Translates to: ASDTNLPKYFLCPPSAFELVNYA*SWELKG
Trigger: CCCTTTCAGCTCCCATGAGCATGCATAGTTCACCAG...TTCAAATGCTGATGGAGGGCAGAGGAAGTACTTAGGGAGGTTGGTGTCAGAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR-3UTR GCA 90 bp TCACTTATTGGAACACCAAGGCATGGCCCCTACACTTCTGAGTGGCTGGACCCATGGTCTGGTGAACTATaGATGCTCATGGGAGCTGAA +
Preference number: 2 (lower is better)
Translates to: SLIGTPRHGPYTSEWLDPWSGEL*MLMGAE
Trigger: TTCAGCTCCCATGAGCATGCATAGTTCACCAGACCA...TGGGTCCAGCCACTCAGAAGTGTAGGGGCCATGCCTTGGTGTTCCAATAAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR-3UTR CCA 90 bp GCCTCTGACACCAACCTCCCTAAGTACTTCCTCTGCCCTCCATCAGCATTTGAAATGGCCTTTCAAACCTaGGGAGGAGAGTCCAAGATG +
Preference number: 2 (lower is better)
Translates to: ASDTNLPKYFLCPPSAFEMAFQT*GGESKM
Trigger: CATCTTGGACTCTCCTCCCCAGGTTTGAAAGGCCAT...TTCAAATGCTGATGGAGGGCAGAGGAAGTACTTAGGGAGGTTGGTGTCAGAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR-3UTR TCA 90 bp GTATTTCCCCACTTGCTACATGGCCTTCACCACTGCTTCACATCTGTCTGCTACAAGTGCTTTGAAGGCTaGGACTGGCAGAGTAGAGAG +
Preference number: 2 (lower is better)
Translates to: VFPHLLHGLHHCFTSVCYKCFEG*DWQSRE
Trigger: CTCTCTACTCTGCCAGTCTCAGCCTTCAAAGCACTT...GTAGCAGACAGATGTGAAGCAGTGGTGAAGGCCATGTAGCAAGTGGGGAAATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR-3UTR GCA 90 bp TGTATTTCCCCACTTGCTACATGGCCTTCACCACTGCTTCACATCTGTCTGCTATTTACCATGTGTTCCTaGCCCATGTGCTTGGTCGCC +
Preference number: 2 (lower is better)
Translates to: CISPLATWPSPLLHICLLFTMCS*PMCLVA
Trigger: GGCGACCAAGCACATGGGGCAGGAACACATGGTAAA...TAGCAGACAGATGTGAAGCAGTGGTGAAGGCCATGTAGCAAGTGGGGAAATACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR-3UTR GCA 90 bp GTATTTCCCCACTTGCTACATGGCCTTCACCACTGCTTCACATCTGTCTGCTACCACTGCACTGCTCACTaGAAAGAAACTCACTTCCCG +
Preference number: 2 (lower is better)
Translates to: VFPHLLHGLHHCFTSVCYHCTAH*KETHFP
Trigger: CGGGAAGTGAGTTTCTTTGCAGTGAGCAGTGCAGTG...GTAGCAGACAGATGTGAAGCAGTGGTGAAGGCCATGTAGCAAGTGGGGAAATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR-3UTR CCA 90 bp GTATTTCCCCACTTGCTACATGGCCTTCACCACTGCTTCACATCTGTCTGCTACTGGTCCTTGACTCCCTaGGTTGGTGAGACTTGTCTT +
Preference number: 2 (lower is better)
Translates to: VFPHLLHGLHHCFTSVCYWSLTP*VGETCL
Trigger: AAGACAAGTCTCACCAACCCAGGGAGTCAAGGACCA...GTAGCAGACAGATGTGAAGCAGTGGTGAAGGCCATGTAGCAAGTGGGGAAATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR-3UTR CCA 90 bp ACACCAACCTCCCTAAGTACTTCCTCTGCCCTCCATCAGCATTTGAAGTCTCTGTGGTCCTTGACTCCCTaGGTTGGTGAGACTTGTCTT +
Preference number: 2 (lower is better)
Translates to: TPTSLSTSSALHQHLKSLWSLTP*VGETCL
Trigger: AAGACAAGTCTCACCAACCCAGGGAGTCAAGGACCA...CAGAGACTTCAAATGCTGATGGAGGGCAGAGGAAGTACTTAGGGAGGTTGGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR-3UTR CCA 90 bp TGTAGCTACCACCACTGCTTCCATTCACTTATTGGAACACCAAGGCATGGCCCCAGGTGGGTGGAGGCATaGCCATTACTGATAAAAATC +
Preference number: 2 (lower is better)
Translates to: CSYHHCFHSLIGTPRHGPRWVEA*PLLIKI
Trigger: GATTTTTATCAGTAATGGCCATGCCTCCACCCACCT...GGGGCCATGCCTTGGTGTTCCAATAAGTGAATGGAAGCAGTGGTGGTAGCTACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR-3UTR CCA 90 bp TGTAGCTACCACCACTGCTTCCATTCACTTATTGGAACACCAAGGCATGGCCCCCAGGAAGTCATTGTTTaGGAGGAAGAAGTTCTGTTC +
Preference number: 2 (lower is better)
Translates to: CSYHHCFHSLIGTPRHGPQEVIV*EEEVLF
Trigger: GAACAGAACTTCTTCCTCCCAAACAATGACTTCCTG...GGGGCCATGCCTTGGTGTTCCAATAAGTGAATGGAAGCAGTGGTGGTAGCTACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR GCA 72 bp CACTGGGCCGGCACCAGGCCAGACTCGTTCCTACCCTaGGATCTGACATACGCCACAGCCCATGGGCACAAG +
Preference number: 3 (lower is better)
Translates to: HWAGTRPDSFLP*DLTYATAHGHK
Trigger: CTTGTGCCCATGGGCTGTGGCGTATGTCAGATCGCAGGGTAGGAACGAGTCTGGCCTGGTGCCGGCCCAGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR CCA 72 bp AGGGAGCAACAGAGGGCGGATGAGCTGAGGAAACACTaGGCCGGCACCAGGCCAGACTCGTTCCTACCCTGC +
Preference number: 3 (lower is better)
Translates to: REQQRADELRKH*AGTRPDSFLPC
Trigger: GCAGGGTAGGAACGAGTCTGGCCTGGTGCCGGCCCAGTGTTTCCTCAGCTCATCCGCCCTCTGTTGCTCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR TCA 72 bp CCGGCACCAGGCCAGACTCGTTCCTACCCTGCGATCTaGCATACGCCACAGCCCATGGGCACAAGCTGTCAG +
Preference number: 3 (lower is better)
Translates to: PAPGQTRSYPAI*HTPQPMGTSCQ
Trigger: CTGACAGCTTGTGCCCATGGGCTGTGGCGTATGTCAGATCGCAGGGTAGGAACGAGTCTGGCCTGGTGCCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR TCA 72 bp CCTGGAATGCTAGGGAGCAACAGAGGGCGGATGAGCTaGGGAAACACTGGGCCGGCACCAGGCCAGACTCGT +
Preference number: 3 (lower is better)
Translates to: PGMLGSNRGRMS*GNTGPAPGQTR
Trigger: ACGAGTCTGGCCTGGTGCCGGCCCAGTGTTTCCTCAGCTCATCCGCCCTCTGTTGCTCCCTAGCATTCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR-3UTR CAA 90 bp CCCTGCTTTCTCCTTGTCCTGCCTGACCCACTGTCCCATCCTAGGAACGGTCCTTCCTGCCCCATGTGCTaGGTCGCCCAGCTTGGTCCA +
Preference number: 3 (lower is better)
Translates to: PCFLLVLPDPLSHPRNGPSCPMC*VAQLGP
Trigger: TGGACCAAGCTGGGCGACCAAGCACATGGGGCAGGA...AGGACCGTTCCTAGGATGGGACAGTGGGTCAGGCAGGACAAGGAGAAAGCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR CCA 72 bp CCCTTGGGCCTAGAGTGGCCTGTAGCTCCAGAGTTCTaGGGACCCAGACCCCACAGTGTCCTTGTCATCTCC +
Preference number: 3 (lower is better)
Translates to: PLGLEWPVAPEF*GPRPHSVLVIS
Trigger: GGAGATGACAAGGACACTGTGGGGTCTGGGTCCCCAGAACTCTGGAGCTACAGGCCACTCTAGGCCCAAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR-3UTR CAA 90 bp ATGGGGAAGGAAGAACTCTGGAAATGGGATAGGGGTGCTGGGCCGAGATGTCCCGCTTGGTCGCCCAGCTaGGTCCAAGCCTTCCCCTGT +
Preference number: 3 (lower is better)
Translates to: MGKEELWKWDRGAGPRCPAWSPS*VQAFPC
Trigger: ACAGGGGAAGGCTTGGACCAAGCTGGGCGACCAAGC...GGGACATCTCGGCCCAGCACCCCTATCCCATTTCCAGAGTTCTTCCTTCCCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR GCA 72 bp TTCATCTTCTGCCTCTGCACCCCACAGCAGCTGTCCTaGCATGGCCTCAGCCTCAAAGTGGGTTCCCTGCAG +
Preference number: 3 (lower is better)
Translates to: FIFCLCTPQQLS*HGLSLKVGSLQ
Trigger: CTGCAGGGAACCCACTTTGAGGCTGAGGCCATGGCAGGACAGCTGCTGTGGGGTGCAGAGGCAGAAGATGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR CCA 72 bp GCTTTGAAGGCTGAGACTGGCAGAGTAGAGAGGAGGTaGATGGGAGGAAGAACGGGAGAGGGGAGAGGGGAG +
Preference number: 3 (lower is better)
Translates to: ALKAETGRVERR*MGGRTGEGRGE
Trigger: CTCCCCTCTCCCCTCTCCCGTTCTTCCTCCCATCCACCTCCTCTCTACTCTGCCAGTCTCAGCCTTCAAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR-3UTR CAA 90 bp ATGGGGAAGGAAGAACTCTGGAAATGGGATAGGGGTGCTGGGCCGAGATGTCCCGACCCCACAGTGTCCTaGTCATCTCCACCACCCGAG +
Preference number: 3 (lower is better)
Translates to: MGKEELWKWDRGAGPRCPDPTVS*SSPPPE
Trigger: CTCGGGTGGTGGAGATGACAAGGACACTGTGGGGTC...GGGACATCTCGGCCCAGCACCCCTATCCCATTTCCAGAGTTCTTCCTTCCCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR-3UTR CAA 90 bp CATGCCACCATAAATCACATGACAGCCTGGATCTCTTGGGGACCCCCTCGGCAGGATACGGCTGGTAGTTaGGGGCCTGTGAGCCAGAGC +
Preference number: 3 (lower is better)
Translates to: HATINHMTAWISWGPPRQDTAGS*GPVSQS
Trigger: GCTCTGGCTCACAGGCCCCAAACTACCAGCCGTATC...CTGCCGAGGGGGTCCCCAAGAGATCCAGGCTGTCATGTGATTTATGGTGGCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR-3UTR CAA 90 bp TGTAGCTACCACCACTGCTTCCATTCACTTATTGGAACACCAAGGCATGGCCCCGGCAGAGGAGGTGCCTaGATCAGGCCCTCACCTCCC +
Preference number: 3 (lower is better)
Translates to: CSYHHCFHSLIGTPRHGPGRGGA*IRPSPP
Trigger: GGGAGGTGAGGGCCTGATCAAGGCACCTCCTCTGCC...GGGGCCATGCCTTGGTGTTCCAATAAGTGAATGGAAGCAGTGGTGGTAGCTACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR-3UTR CAA 90 bp GGGCCTAGAGTGGCCTGTAGCTCCAGAGTTCTGGGGACCCAGACCCCACAGTGTCCTCTTTTAGTGGCCTaGCTTCTCTCCTGCCAAGAA +
Preference number: 3 (lower is better)
Translates to: GPRVACSSRVLGTQTPQCPLLVA*LLSCQE
Trigger: TTCTTGGCAGGAGAGAAGCAAGGCCACTAAAAGAGG...ACACTGTGGGGTCTGGGTCCCCAGAACTCTGGAGCTACAGGCCACTCTAGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR-3UTR CAA 90 bp TCACTTATTGGAACACCAAGGCATGGCCCCTACACTTCTGAGTGGCTGGACCCATCCTGCCCCATGTGCTaGGTCGCCCAGCTTGGTCCA +
Preference number: 3 (lower is better)
Translates to: SLIGTPRHGPYTSEWLDPSCPMC*VAQLGP
Trigger: TGGACCAAGCTGGGCGACCAAGCACATGGGGCAGGA...TGGGTCCAGCCACTCAGAAGTGTAGGGGCCATGCCTTGGTGTTCCAATAAGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR-3UTR CAA 90 bp ATGGGGAAGGAAGAACTCTGGAAATGGGATAGGGGTGCTGGGCCGAGATGTCCCTGCCCTGCTTTCTCCTaGTCCTGCCTGACCCACTGT +
Preference number: 3 (lower is better)
Translates to: MGKEELWKWDRGAGPRCPCPAFS*SCLTHC
Trigger: ACAGTGGGTCAGGCAGGACAAGGAGAAAGCAGGGCA...GGGACATCTCGGCCCAGCACCCCTATCCCATTTCCAGAGTTCTTCCTTCCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR TCA 72 bp CGCCACAGCCCATGGGCACAAGCTGTCAGCCATGCCTaGTGTGGTCCTCTAGGCATCATTCTGCCCTGCTTT +
Preference number: 3 (lower is better)
Translates to: RHSPWAQAVSHA*CGPLGIILPCF
Trigger: AAAGCAGGGCAGAATGATGCCTAGAGGACCACATCAGGCATGGCTGACAGCTTGTGCCCATGGGCTGTGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR TCA 72 bp CCTCAGGCACTCCCTTTTCCTAGAATCCACCTTCCCTaGTCCCCCACTCCTGCCTCTGACACCAACCTCCCT +
Preference number: 3 (lower is better)
Translates to: PQALPFPRIHLP*SPTPASDTNLP
Trigger: AGGGAGGTTGGTGTCAGAGGCAGGAGTGGGGGATCAGGGAAGGTGGATTCTAGGAAAAGGGAGTGCCTGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR-3UTR CAA 90 bp AGAGTGGCCTGTAGCTCCAGAGTTCTGGGGACCCAGACCCCACAGTGTCCTTGTCCTTGCTGCTCTAGGTaGGCCATCAGTTTTCCCTTC +
Preference number: 3 (lower is better)
Translates to: RVACSSRVLGTQTPQCPCPCCSR*AISFPF
Trigger: GAAGGGAAAACTGATGGCCAACCTAGAGCAGCAAGG...ACAAGGACACTGTGGGGTCTGGGTCCCCAGAACTCTGGAGCTACAGGCCACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR GCA 72 bp GCTACCTCTGTGCCCGACTTCCACTGCACTGCTCACTaGAAAGAAACTCACTTCCCGACCCCACTGCAGAGT +
Preference number: 3 (lower is better)
Translates to: ATSVPDFHCTAH*KETHFPTPLQS
Trigger: ACTCTGCAGTGGGGTCGGGAAGTGAGTTTCTTTGCAGTGAGCAGTGCAGTGGAAGTCGGGCACAGAGGTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR CCA 72 bp GGTGGAGGCATGGCCATTACTGATAAAAATCACAGCTaGGCCCCGAGTGGGCAGAGGAGGTGCCTTGATCAG +
Preference number: 3 (lower is better)
Translates to: GGGMAITDKNHS*APSGQRRCLDQ
Trigger: CTGATCAAGGCACCTCCTCTGCCCACTCGGGGCCCAGCTGTGATTTTTATCAGTAATGGCCATGCCTCCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR CCA 72 bp CATGTGTTCCTGCCCCATGTGCTTGGTCGCCCAGCTTaGTCCAAGCCTTCCCCTGTATGCTGCTTTCAAGGT +
Preference number: 3 (lower is better)
Translates to: HVFLPHVLGRPA*SKPSPVCCFQG
Trigger: ACCTTGAAAGCAGCATACAGGGGAAGGCTTGGACCAAGCTGGGCGACCAAGCACATGGGGCAGGAACACATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR CCA 72 bp CAGCCCATGGGCACAAGCTGTCAGCCATGCCTGATGTaGTCCTCTAGGCATCATTCTGCCCTGCTTTCTCCT +
Preference number: 3 (lower is better)
Translates to: QPMGTSCQPCLM*SSRHHSALLSP
Trigger: AGGAGAAAGCAGGGCAGAATGATGCCTAGAGGACCACATCAGGCATGGCTGACAGCTTGTGCCCATGGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR-3UTR CAA 90 bp CCCTGCTTTCTCCTTGTCCTGCCTGACCCACTGTCCCATCCTAGGAACGGTCCTCTGATGTCAAGTGCTTaGAAGGCTGAGACTGGCAGA +
Preference number: 3 (lower is better)
Translates to: PCFLLVLPDPLSHPRNGPLMSSA*KAETGR
Trigger: TCTGCCAGTCTCAGCCTTCAAAGCACTTGACATCAG...AGGACCGTTCCTAGGATGGGACAGTGGGTCAGGCAGGACAAGGAGAAAGCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR-3UTR CAA 90 bp TGTATTTCCCCACTTGCTACATGGCCTTCACCACTGCTTCACATCTGTCTGCTAGGCAGAGGAGGTGCCTaGATCAGGCCCTCACCTCCC +
Preference number: 3 (lower is better)
Translates to: CISPLATWPSPLLHICLLGRGGA*IRPSPP
Trigger: GGGAGGTGAGGGCCTGATCAAGGCACCTCCTCTGCC...TAGCAGACAGATGTGAAGCAGTGGTGAAGGCCATGTAGCAAGTGGGGAAATACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR-3UTR CAA 90 bp ATGGGGAAGGAAGAACTCTGGAAATGGGATAGGGGTGCTGGGCCGAGATGTCCCCCTTGCTGCTCTAGGTaGGCCATCAGTTTTCCCTTC +
Preference number: 3 (lower is better)
Translates to: MGKEELWKWDRGAGPRCPPCCSR*AISFPF
Trigger: GAAGGGAAAACTGATGGCCAACCTAGAGCAGCAAGG...GGGACATCTCGGCCCAGCACCCCTATCCCATTTCCAGAGTTCTTCCTTCCCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR-3UTR CAA 90 bp CATGCCACCATAAATCACATGACAGCCTGGATCTCTTGGGGACCCCCTCGGCAGCCTGGGAGATTCGATTaGAACACCTCAGTCGCTCTC +
Preference number: 3 (lower is better)
Translates to: HATINHMTAWISWGPPRQPGRFD*NTSVAL
Trigger: GAGAGCGACTGAGGTGTTCAAATCGAATCTCCCAGG...CTGCCGAGGGGGTCCCCAAGAGATCCAGGCTGTCATGTGATTTATGGTGGCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR CCA 72 bp CACCCCGTCCCTGCTAATCTGATGGCCTTTCAAACCTaGGGAGGAGAGTCCAAGATGGCTCCTGGAATGCTA +
Preference number: 3 (lower is better)
Translates to: HPVPANLMAFQT*GGESKMAPGML
Trigger: TAGCATTCCAGGAGCCATCTTGGACTCTCCTCCCCAGGTTTGAAAGGCCATCAGATTAGCAGGGACGGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR CCA 72 bp AACATGCTCACATGTTTATGGGAGGCTGCAATAGTCTaGGCCCACTTGTGGCTGCTGCGGGTACAGGGAAGG +
Preference number: 3 (lower is better)
Translates to: NMLTCLWEAAIV*AHLWLLRVQGR
Trigger: CCTTCCCTGTACCCGCAGCAGCCACAAGTGGGCCCAGACTATTGCAGCCTCCCATAAACATGTGAGCATGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR-3UTR CAA 90 bp ACACCTCAGTCGCTCTCCGAAGATTCCAGCCAGGTCCACTCACATCATGGCACAGCCCTCCATCAGCATTaGAAGTCTCTGTCTGATGGC +
Preference number: 3 (lower is better)
Translates to: TPQSLSEDSSQVHSHHGTALHQH*KSLSDG
Trigger: GCCATCAGACAGAGACTTCAAATGCTGATGGAGGGC...TGTGCCATGATGTGAGTGGACCTGGCTGGAATCTTCGGAGAGCGACTGAGGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR GCA 72 bp TCACATCTGTCTGCTACCTCTGTGCCCGACTTCCACTaGACTGCTCACTGCAAAGAAACTCACTTCCCGACC +
Preference number: 3 (lower is better)
Translates to: SHLSATSVPDFH*TAHCKETHFPT
Trigger: GGTCGGGAAGTGAGTTTCTTTGCAGTGAGCAGTGCAGTGGAAGTCGGGCACAGAGGTAGCAGACAGATGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR GCA 72 bp TTGCTACATGGCCTTCACCACTGCTTCACATCTGTCTaGTACCTCTGTGCCCGACTTCCACTGCACTGCTCA +
Preference number: 3 (lower is better)
Translates to: LLHGLHHCFTSV*YLCARLPLHCS
Trigger: TGAGCAGTGCAGTGGAAGTCGGGCACAGAGGTAGCAGACAGATGTGAAGCAGTGGTGAAGGCCATGTAGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR GCA 72 bp TCCCATCCTAGGAACGGTCCTCATGTCACACCACCATaGACACCACTCTTGCACGTGTCCCTCCTTCACTTT +
Preference number: 3 (lower is better)
Translates to: SHPRNGPHVTPP*TPLLHVSLLHF
Trigger: AAAGTGAAGGAGGGACACGTGCAAGAGTGGTGTGCATGGTGGTGTGACATGAGGACCGTTCCTAGGATGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR GCA 72 bp CACCCTGCCAACTCTGCCCAGTGTAGCTACCACCACTaGTTCCATTCACTTATTGGAACACCAAGGCATGGC +
Preference number: 3 (lower is better)
Translates to: HPANSAQCSYHH*FHSLIGTPRHG
Trigger: GCCATGCCTTGGTGTTCCAATAAGTGAATGGAAGCAGTGGTGGTAGCTACACTGGGCAGAGTTGGCAGGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR-3UTR CAA 90 bp TGCTTTCTCCTTGTCCTGCCTGACCCACTGTCCCATCCTAGGAACGGTCCTCATCCTCTTTTAGTGGCCTaGCTTCTCTCCTGCCAAGAA +
Preference number: 3 (lower is better)
Translates to: CFLLVLPDPLSHPRNGPHPLLVA*LLSCQE
Trigger: TTCTTGGCAGGAGAGAAGCAAGGCCACTAAAAGAGG...ATGAGGACCGTTCCTAGGATGGGACAGTGGGTCAGGCAGGACAAGGAGAAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR-3UTR CAA 90 bp ATGGGGAAGGAAGAACTCTGGAAATGGGATAGGGGTGCTGGGCCGAGATGTCCCCATGGCAGGAAGTCATaGTTTGGGAGGAAGAAGTTC +
Preference number: 3 (lower is better)
Translates to: MGKEELWKWDRGAGPRCPHGRKS*FGRKKF
Trigger: GAACTTCTTCCTCCCAAACAATGACTTCCTGCCATG...GGGACATCTCGGCCCAGCACCCCTATCCCATTTCCAGAGTTCTTCCTTCCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR-3UTR CAA 90 bp ATGGGGAAGGAAGAACTCTGGAAATGGGATAGGGGTGCTGGGCCGAGATGTCCCTCACTTGACTTAACCTaGCAGAAGTGGAGCTGGAAG +
Preference number: 3 (lower is better)
Translates to: MGKEELWKWDRGAGPRCPSLDLT*QKWSWK
Trigger: CTTCCAGCTCCACTTCTGCAAGGTTAAGTCAAGTGA...GGGACATCTCGGCCCAGCACCCCTATCCCATTTCCAGAGTTCTTCCTTCCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR GCA 72 bp CCTTCACCACTGCTTCACATCTGTCTGCTACCTCTGTaGCCGACTTCCACTGCACTGCTCACTGCAAAGAAA +
Preference number: 3 (lower is better)
Translates to: PSPLLHICLLPL*PTSTALLTAKK
Trigger: TTTCTTTGCAGTGAGCAGTGCAGTGGAAGTCGGGCACAGAGGTAGCAGACAGATGTGAAGCAGTGGTGAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR GCA 72 bp CCCAACTCCCAGGCCCTTTGGATGTATTTCCCCACTTaGTACATGGCCTTCACCACTGCTTCACATCTGTCT +
Preference number: 3 (lower is better)
Translates to: PNSQALWMYFPT*YMAFTTASHLS
Trigger: AGACAGATGTGAAGCAGTGGTGAAGGCCATGTAGCAAGTGGGGAAATACATCCAAAGGGCCTGGGAGTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR CCA 72 bp ATTGGAACACCAAGGCATGGCCCCTACACTTCTGAGTaGCTGGACCCATATGCTCAAAGGCCTTTTGTTCCC +
Preference number: 3 (lower is better)
Translates to: IGTPRHGPYTSE*LDPYAQRPFVP
Trigger: GGGAACAAAAGGCCTTTGAGCATATGGGTCCAGCCACTCAGAAGTGTAGGGGCCATGCCTTGGTGTTCCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR-3UTR CAA 90 bp GTATTTCCCCACTTGCTACATGGCCTTCACCACTGCTTCACATCTGTCTGCTACTTGGTTTGCTGGTCCTaGACTCCCTGGGTTGGTGAG +
Preference number: 3 (lower is better)
Translates to: VFPHLLHGLHHCFTSVCYLVCWS*TPWVGE
Trigger: CTCACCAACCCAGGGAGTCAAGGACCAGCAAACCAA...GTAGCAGACAGATGTGAAGCAGTGGTGAAGGCCATGTAGCAAGTGGGGAAATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR-3UTR CAA 90 bp GCTTCACATCTGTCTGCTACCTCTGTGCCCGACTTCCACTGCACTGCTCACTGCAGTCCATTATCCACTTaGGTTTGCTGGTCCTTGACT +
Preference number: 3 (lower is better)
Translates to: ASHLSATSVPDFHCTAHCSPLST*VCWSLT
Trigger: AGTCAAGGACCAGCAAACCAAAGTGGATAATGGACT...GCAGTGAGCAGTGCAGTGGAAGTCGGGCACAGAGGTAGCAGACAGATGTGAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR-3UTR CAA 90 bp CTGCTACCTCTGTGCCCGACTTCCACTGCACTGCTCACTGCAAAGAAACTCACTATTATCCACTTTGGTTaGCTGGTCCTTGACTCCCTG +
Preference number: 3 (lower is better)
Translates to: LLPLCPTSTALLTAKKLTIIHFG*LVLDSL
Trigger: CAGGGAGTCAAGGACCAGCAAACCAAAGTGGATAAT...AGTGAGTTTCTTTGCAGTGAGCAGTGCAGTGGAAGTCGGGCACAGAGGTAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR CCA 72 bp CCATTATCCACTTTGGTTTGCTGGTCCTTGACTCCCTaGGTTGGTGAGACTTGTCTTCTGGGACTGAAGGAG +
Preference number: 3 (lower is better)
Translates to: PLSTLVCWSLTP*VGETCLLGLKE
Trigger: CTCCTTCAGTCCCAGAAGACAAGTCTCACCAACCCAGGGAGTCAAGGACCAGCAAACCAAAGTGGATAATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR-3UTR CAA 90 bp AGCTTTCCCTCTTCATCTGGGCATCTAAGTCCTTTACCCCTCAAGACCACTGCTCTGATGTCAAGTGCTTaGAAGGCTGAGACTGGCAGA +
Preference number: 3 (lower is better)
Translates to: SFPSSSGHLSPLPLKTTALMSSA*KAETGR
Trigger: TCTGCCAGTCTCAGCCTTCAAAGCACTTGACATCAG...AGCAGTGGTCTTGAGGGGTAAAGGACTTAGATGCCCAGATGAAGAGGGAAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR CCA 72 bp TCTTCCAGGATGGGACTTAGAGAATGGCTAGGCCATTaGTCTGGTGAACTATGCATGCTCATGGGAGCTGAA +
Preference number: 3 (lower is better)
Translates to: SSRMGLREWLGH*SGELCMLMGAE
Trigger: TTCAGCTCCCATGAGCATGCATAGTTCACCAGACCAATGGCCTAGCCATTCTCTAAGTCCCATCCTGGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR-3UTR CAA 90 bp ACACCAACCTCCCTAAGTACTTCCTCTGCCCTCCATCAGCATTTGAAGTCTCTGATTATCCACTTTGGTTaGCTGGTCCTTGACTCCCTG +
Preference number: 3 (lower is better)
Translates to: TPTSLSTSSALHQHLKSLIIHFG*LVLDSL
Trigger: CAGGGAGTCAAGGACCAGCAAACCAAAGTGGATAAT...CAGAGACTTCAAATGCTGATGGAGGGCAGAGGAAGTACTTAGGGAGGTTGGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR TCA 72 bp GAAAAAGTCCATTATCCACTTTGGTTTGCTGGTCCTTaGCTCCCTGGGTTGGTGAGACTTGTCTTCTGGGAC +
Preference number: 3 (lower is better)
Translates to: EKVHYPLWFAGP*LPGLVRLVFWD
Trigger: GTCCCAGAAGACAAGTCTCACCAACCCAGGGAGTCAAGGACCAGCAAACCAAAGTGGATAATGGACTTTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR TCA 72 bp GGAGACACCATCTCCCTATTTCTCATCGTTCTCACTTaGCTTAACCTTGCAGAAGTGGAGCTGGAAGTGGGT +
Preference number: 3 (lower is better)
Translates to: GDTISLFLIVLT*LNLAEVELEVG
Trigger: ACCCACTTCCAGCTCCACTTCTGCAAGGTTAAGTCAAGTGAGAACGATGAGAAATAGGGAGATGGTGTCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR-3UTR CAA 90 bp AGCTTTCCCTCTTCATCTGGGCATCTAAGTCCTTTACCCCTCAAGACCACTGCTAGTCCATTATCCACTTaGGTTTGCTGGTCCTTGACT +
Preference number: 3 (lower is better)
Translates to: SFPSSSGHLSPLPLKTTASPLST*VCWSLT
Trigger: AGTCAAGGACCAGCAAACCAAAGTGGATAATGGACT...AGCAGTGGTCTTGAGGGGTAAAGGACTTAGATGCCCAGATGAAGAGGGAAAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR CCA 72 bp GAAGAAATAACTTCTTCCAGGATGGGACTTAGAGAATaGCTAGGCCATTGGTCTGGTGAACTATGCATGCTC +
Preference number: 3 (lower is better)
Translates to: EEITSSRMGLRE*LGHWSGELCML
Trigger: GAGCATGCATAGTTCACCAGACCAATGGCCTAGCCATTCTCTAAGTCCCATCCTGGAAGAAGTTATTTCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR TCA 72 bp TCTGATTGTGGCTATCTTAAGTTCAGGGAGAAGGTCTaGTTGATTCTTGTGTCCTTAGTGCTTAACCCCAGA +
Preference number: 3 (lower is better)
Translates to: SDCGYLKFREKV*LILVSLVLNPR
Trigger: TCTGGGGTTAAGCACTAAGGACACAAGAATCAATCAGACCTTCTCCCTGAACTTAAGATAGCCACAATCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp GGGCCTAGAGTGGCCTGTAGCTCCAGAGTTCTGGGGACCCAGACCCCACAGTGTGGTCCCCGAACTCCCTaGACAGGGTGTTGCTGGGCG +
Preference number: 4 (lower is better)
Translates to: GPRVACSSRVLGTQTPQCGPRTP*TGCCWA
Trigger: CGCCCAGCAACACCCTGTGCAGGGAGTTCGGGGACC...ACACTGTGGGGTCTGGGTCCCCAGAACTCTGGAGCTACAGGCCACTCTAGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp GGGCCTAGAGTGGCCTGTAGCTCCAGAGTTCTGGGGACCCAGACCCCACAGTGTCAGCTCTGGAGATGCTaGCTCCTGGGCTCTGCGGTG +
Preference number: 4 (lower is better)
Translates to: GPRVACSSRVLGTQTPQCQLWRC*LLGSAV
Trigger: CACCGCAGAGCCCAGGAGGCAGCATCTCCAGAGCTG...ACACTGTGGGGTCTGGGTCCCCAGAACTCTGGAGCTACAGGCCACTCTAGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp CCCTGCTTTCTCCTTGTCCTGCCTGACCCACTGTCCCATCCTAGGAACGGTCCTGGTCCCCGAACTCCCTaGACAGGGTGTTGCTGGGCG +
Preference number: 4 (lower is better)
Translates to: PCFLLVLPDPLSHPRNGPGPRTP*TGCCWA
Trigger: CGCCCAGCAACACCCTGTGCAGGGAGTTCGGGGACC...AGGACCGTTCCTAGGATGGGACAGTGGGTCAGGCAGGACAAGGAGAAAGCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp GGGCCTAGAGTGGCCTGTAGCTCCAGAGTTCTGGGGACCCAGACCCCACAGTGTTTGCAGGGAGGGTGTTaGGTCTGGGGATGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: GPRVACSSRVLGTQTPQCLQGGC*VWGWWQ
Trigger: CTGCCACCATCCCCAGACGCAACACCCTCCCTGCAA...ACACTGTGGGGTCTGGGTCCCCAGAACTCTGGAGCTACAGGCCACTCTAGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp AGAGTGGCCTGTAGCTCCAGAGTTCTGGGGACCCAGACCCCACAGTGTCCTTGTCAGAGTCCCCTGCACTaGCCTGTGCCTCTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: RVACSSRVLGTQTPQCPCQSPLH*PVPLPS
Trigger: GCTGGGCAGAGGCACAGGGCAGTGCAGGGGACTCTG...ACAAGGACACTGTGGGGTCTGGGTCCCCAGAACTCTGGAGCTACAGGCCACTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp GGGCCTAGAGTGGCCTGTAGCTCCAGAGTTCTGGGGACCCAGACCCCACAGTGTGGCCCCTGGGCTCATTaGGATGTAGACGCTCTGGGA +
Preference number: 4 (lower is better)
Translates to: GPRVACSSRVLGTQTPQCGPWAH*DVDALG
Trigger: TCCCAGAGCGTCTACATCCCAATGAGCCCAGGGGCC...ACACTGTGGGGTCTGGGTCCCCAGAACTCTGGAGCTACAGGCCACTCTAGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp GGGCCTAGAGTGGCCTGTAGCTCCAGAGTTCTGGGGACCCAGACCCCACAGTGTCCTGCCCCATGTGCTTaGTCGCCCAGCTTGGTCCAA +
Preference number: 4 (lower is better)
Translates to: GPRVACSSRVLGTQTPQCPAPCA*SPSLVQ
Trigger: TTGGACCAAGCTGGGCGACCAAGCACATGGGGCAGG...ACACTGTGGGGTCTGGGTCCCCAGAACTCTGGAGCTACAGGCCACTCTAGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR CAA 72 bp CTCCAGAGTTCTGGGGACCCAGACCCCACAGTGTCCTaGTCATCTCCACCACCCGAGCTCCAAGCCCTGCTC +
Preference number: 4 (lower is better)
Translates to: LQSSGDPDPTVS*SSPPPELQALL
Trigger: GAGCAGGGCTTGGAGCTCGGGTGGTGGAGATGACAAGGACACTGTGGGGTCTGGGTCCCCAGAACTCTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR TCA 90 bp CGAGCTCCAAGCCCTGCTCCTTGCTGCTCTAGGTTGGCCATCAGTTTTCCCTTCCTGTCTCGGAGCCTGTaGGGCTGCCCTTGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: RAPSPAPCCSRLAISFPFLSRSL*GCPWCG
Trigger: GCCACACCAAGGGCAGCCTCACAGGCTCCGAGACAG...GAAGGGAAAACTGATGGCCAACCTAGAGCAGCAAGGAGCAGGGCTTGGAGCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR TCA 90 bp TTTGTCCTTCATCTTCTGCCTCTGCACCCCACAGCAGCTGTCCTGCCATGGCCTTGGGGGAGCTATGGCTaGGTCCCCAGGAGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: FVLHLLPLHPTAAVLPWPWGSYG*VPRSGH
Trigger: GTGGCCACTCCTGGGGACTCAGCCATAGCTCCCCCA...AGGCCATGGCAGGACAGCTGCTGTGGGGTGCAGAGGCAGAAGATGAAGGACAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR TCA 90 bp GGGCCTAGAGTGGCCTGTAGCTCCAGAGTTCTGGGGACCCAGACCCCACAGTGTGCTGTCAGCCATGCCTaGTGTGGTCCTCTAGGCATC +
Preference number: 4 (lower is better)
Translates to: GPRVACSSRVLGTQTPQCAVSHA*CGPLGI
Trigger: GATGCCTAGAGGACCACATCAGGCATGGCTGACAGC...ACACTGTGGGGTCTGGGTCCCCAGAACTCTGGAGCTACAGGCCACTCTAGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR TCA 90 bp CCCTGCTTTCTCCTTGTCCTGCCTGACCCACTGTCCCATCCTAGGAACGGTCCTGGCAGGGGGCCTGTGTaGAGCAGTGCTGAGTGGGAA +
Preference number: 4 (lower is better)
Translates to: PCFLLVLPDPLSHPRNGPGRGPV*SSAEWE
Trigger: TTCCCACTCAGCACTGCTTCACACAGGCCCCCTGCC...AGGACCGTTCCTAGGATGGGACAGTGGGTCAGGCAGGACAAGGAGAAAGCAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR TCA 90 bp CATGCCACCATAAATCACATGACAGCCTGGATCTCTTGGGGACCCCCTCGGCAGGGGCCAGAGGGAGGATaGGCTGAGCCCATGCTCCAG +
Preference number: 4 (lower is better)
Translates to: HATINHMTAWISWGPPRQGPEGG*AEPMLQ
Trigger: CTGGAGCATGGGCTCAGCTCATCCTCCCTCTGGCCC...CTGCCGAGGGGGTCCCCAAGAGATCCAGGCTGTCATGTGATTTATGGTGGCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp TTCTGGGGACCCAGACCCCACAGTGTCCTTGTCATCTCCACCACCCGAGCTCCATTCAGCAGACCGGCCTaGACTCTCTCCACCACGCTG +
Preference number: 4 (lower is better)
Translates to: FWGPRPHSVLVISTTRAPFSRPA*TLSTTL
Trigger: CAGCGTGGTGGAGAGAGTGCAGGCCGGTCTGCTGAA...TGGAGCTCGGGTGGTGGAGATGACAAGGACACTGTGGGGTCTGGGTCCCCAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp GCTTCACATCTGTCTGCTACCTCTGTGCCCGACTTCCACTGCACTGCTCACTGCCCTCTGCCCAGCCTGTaGCTGTCCCAGGGTTCCCCT +
Preference number: 4 (lower is better)
Translates to: ASHLSATSVPDFHCTAHCPLPSL*LSQGSP
Trigger: AGGGGAACCCTGGGACAGGCACAGGCTGGGCAGAGG...GCAGTGAGCAGTGCAGTGGAAGTCGGGCACAGAGGTAGCAGACAGATGTGAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp CCCTGCTTTCTCCTTGTCCTGCCTGACCCACTGTCCCATCCTAGGAACGGTCCTGGAGGGTGTTGCGTCTaGGGATGGTGGCAGCGACAG +
Preference number: 4 (lower is better)
Translates to: PCFLLVLPDPLSHPRNGPGGCCV*GWWQRQ
Trigger: CTGTCGCTGCCACCATCCCCAGACGCAACACCCTCC...AGGACCGTTCCTAGGATGGGACAGTGGGTCAGGCAGGACAAGGAGAAAGCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp AGAGTGGCCTGTAGCTCCAGAGTTCTGGGGACCCAGACCCCACAGTGTCCTTGTGTCTGGGCCCACTTGTaGCTGCTGCGGGTACAGGGA +
Preference number: 4 (lower is better)
Translates to: RVACSSRVLGTQTPQCPCVWAHL*LLRVQG
Trigger: TCCCTGTACCCGCAGCAGCCACAAGTGGGCCCAGAC...ACAAGGACACTGTGGGGTCTGGGTCCCCAGAACTCTGGAGCTACAGGCCACTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR TCA 90 bp TTCTGGGGACCCAGACCCCACAGTGTCCTTGTCATCTCCACCACCCGAGCTCCAGGGGCCATGACCGGCTaGGGAAACATTTCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: FWGPRPHSVLVISTTRAPGAMTG*GNISQG
Trigger: TCCCTGAGAAATGTTTCCTCAGCCGGTCATGGCCCC...TGGAGCTCGGGTGGTGGAGATGACAAGGACACTGTGGGGTCTGGGTCCCCAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR TCA 90 bp ACCTCAGTCGCTCTCCGAAGATTCCAGCCAGGTCCACTCACATCATGGCACACTCTGTCTCGGAGCCTGTaGGGCTGCCCTTGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: TSVALRRFQPGPLTSWHTLSRSL*GCPWCG
Trigger: GCCACACCAAGGGCAGCCTCACAGGCTCCGAGACAG...AGTGTGCCATGATGTGAGTGGACCTGGCTGGAATCTTCGGAGAGCGACTGAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR TCA 90 bp ACACCTCAGTCGCTCTCCGAAGATTCCAGCCAGGTCCACTCACATCATGGCACATGGGGGAGCTATGGCTaGGTCCCCAGGAGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: TPQSLSEDSSQVHSHHGTWGSYG*VPRSGH
Trigger: GTGGCCACTCCTGGGGACTCAGCCATAGCTCCCCCA...TGTGCCATGATGTGAGTGGACCTGGCTGGAATCTTCGGAGAGCGACTGAGGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR TCA 90 bp GCTTCACATCTGTCTGCTACCTCTGTGCCCGACTTCCACTGCACTGCTCACTGCAGAGGGCGGATGAGCTaGGGAAACACTGGGCCGGCA +
Preference number: 4 (lower is better)
Translates to: ASHLSATSVPDFHCTAHCRGRMS*GNTGPA
Trigger: TGCCGGCCCAGTGTTTCCTCAGCTCATCCGCCCTCT...GCAGTGAGCAGTGCAGTGGAAGTCGGGCACAGAGGTAGCAGACAGATGTGAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR TCA 90 bp TTCTGGGGACCCAGACCCCACAGTGTCCTTGTCATCTCCACCACCCGAGCTCCAAGAATCCACCTTCCCTaGTCCCCCACTCCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: FWGPRPHSVLVISTTRAPRIHLP*SPTPAS
Trigger: AGAGGCAGGAGTGGGGGATCAGGGAAGGTGGATTCT...TGGAGCTCGGGTGGTGGAGATGACAAGGACACTGTGGGGTCTGGGTCCCCAGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR TCA 90 bp TTCTGGGGACCCAGACCCCACAGTGTCCTTGTCATCTCCACCACCCGAGCTCCATGGCCCCTACACTTCTaGGTGGCTGGACCCATATGC +
Preference number: 4 (lower is better)
Translates to: FWGPRPHSVLVISTTRAPWPLHF*VAGPIC
Trigger: GCATATGGGTCCAGCCACTCAGAAGTGTAGGGGCCA...TGGAGCTCGGGTGGTGGAGATGACAAGGACACTGTGGGGTCTGGGTCCCCAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR TCA 90 bp ACCTCAGTCGCTCTCCGAAGATTCCAGCCAGGTCCACTCACATCATGGCACACTGGGCCAGAGGGAGGATaGGCTGAGCCCATGCTCCAG +
Preference number: 4 (lower is better)
Translates to: TSVALRRFQPGPLTSWHTGPEGG*AEPMLQ
Trigger: CTGGAGCATGGGCTCAGCTCATCCTCCCTCTGGCCC...AGTGTGCCATGATGTGAGTGGACCTGGCTGGAATCTTCGGAGAGCGACTGAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp ACCTCAGTCGCTCTCCGAAGATTCCAGCCAGGTCCACTCACATCATGGCACACTCAGAGTCCCCTGCACTaGCCTGTGCCTCTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: TSVALRRFQPGPLTSWHTQSPLH*PVPLPS
Trigger: GCTGGGCAGAGGCACAGGGCAGTGCAGGGGACTCTG...AGTGTGCCATGATGTGAGTGGACCTGGCTGGAATCTTCGGAGAGCGACTGAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp GCTTCACATCTGTCTGCTACCTCTGTGCCCGACTTCCACTGCACTGCTCACTGCCACTGCAGAGTCCCCTaGACTGCCCTGTGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: ASHLSATSVPDFHCTAHCHCRVP*TALCLC
Trigger: GCAGAGGCACAGGGCAGTGCAGGGGACTCTGCAGTG...GCAGTGAGCAGTGCAGTGGAAGTCGGGCACAGAGGTAGCAGACAGATGTGAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp TTTGTCCTTCATCTTCTGCCTCTGCACCCCACAGCAGCTGTCCTGCCATGGCCTCCCACTTGTGGCTGCTaGGGGTACAGGGAAGGCACC +
Preference number: 4 (lower is better)
Translates to: FVLHLLPLHPTAAVLPWPPTCGC*GYREGT
Trigger: GGTGCCTTCCCTGTACCCGCAGCAGCCACAAGTGGG...AGGCCATGGCAGGACAGCTGCTGTGGGGTGCAGAGGCAGAAGATGAAGGACAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp GCTTCACATCTGTCTGCTACCTCTGTGCCCGACTTCCACTGCACTGCTCACTGCGCTGCTGAGCTCAGCTaGAGAAGAGCGGGGGCCATG +
Preference number: 4 (lower is better)
Translates to: ASHLSATSVPDFHCTAHCAAELS*RRAGAM
Trigger: CATGGCCCCCGCTCTTCTCCAGCTGAGCTCAGCAGC...GCAGTGAGCAGTGCAGTGGAAGTCGGGCACAGAGGTAGCAGACAGATGTGAAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp TTTGTCCTTCATCTTCTGCCTCTGCACCCCACAGCAGCTGTCCTGCCATGGCCTGGAGGGTGTTGCGTCTaGGGATGGTGGCAGCGACAG +
Preference number: 4 (lower is better)
Translates to: FVLHLLPLHPTAAVLPWPGGCCV*GWWQRQ
Trigger: CTGTCGCTGCCACCATCCCCAGACGCAACACCCTCC...AGGCCATGGCAGGACAGCTGCTGTGGGGTGCAGAGGCAGAAGATGAAGGACAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp GGGCCTAGAGTGGCCTGTAGCTCCAGAGTTCTGGGGACCCAGACCCCACAGTGTCACCTGCTCGTTCCATaGCCAACAGGGTGGAAGAAC +
Preference number: 4 (lower is better)
Translates to: GPRVACSSRVLGTQTPQCHLLVP*PTGWKN
Trigger: GTTCTTCCACCCTGTTGGCCATGGAACGAGCAGGTG...ACACTGTGGGGTCTGGGTCCCCAGAACTCTGGAGCTACAGGCCACTCTAGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp ACCTCAGTCGCTCTCCGAAGATTCCAGCCAGGTCCACTCACATCATGGCACACTGTAGATGGCTTGCGGTaGGGGCTTGGGGAGCTCGGC +
Preference number: 4 (lower is better)
Translates to: TSVALRRFQPGPLTSWHTVDGLR*GLGELG
Trigger: GCCGAGCTCCCCAAGCCCCCACCGCAAGCCATCTAC...AGTGTGCCATGATGTGAGTGGACCTGGCTGGAATCTTCGGAGAGCGACTGAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp GGGCCTAGAGTGGCCTGTAGCTCCAGAGTTCTGGGGACCCAGACCCCACAGTGTACTGAACGTGAGGTGTaGAATCTGGCTCAGAGCCCC +
Preference number: 4 (lower is better)
Translates to: GPRVACSSRVLGTQTPQCTEREV*NLAQSP
Trigger: GGGGCTCTGAGCCAGATTCCACACCTCACGTTCAGT...ACACTGTGGGGTCTGGGTCCCCAGAACTCTGGAGCTACAGGCCACTCTAGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp GCTTCACATCTGTCTGCTACCTCTGTGCCCGACTTCCACTGCACTGCTCACTGCGCCGAGATGTCCCCATaGGAGAAGGGGCCAGAGGGA +
Preference number: 4 (lower is better)
Translates to: ASHLSATSVPDFHCTAHCAEMSP*EKGPEG
Trigger: TCCCTCTGGCCCCTTCTCCCATGGGGACATCTCGGC...GCAGTGAGCAGTGCAGTGGAAGTCGGGCACAGAGGTAGCAGACAGATGTGAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR TCA 90 bp GCTTCACATCTGTCTGCTACCTCTGTGCCCGACTTCCACTGCACTGCTCACTGCATTGGCGGTCTCTGCTaGGGACTGCCCCATCGAGGT +
Preference number: 4 (lower is better)
Translates to: ASHLSATSVPDFHCTAHCIGGLC*GLPHRG
Trigger: ACCTCGATGGGGCAGTCCTCAGCAGAGACCGCCAAT...GCAGTGAGCAGTGCAGTGGAAGTCGGGCACAGAGGTAGCAGACAGATGTGAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR TCA 90 bp TTCTGGGGACCCAGACCCCACAGTGTCCTTGTCATCTCCACCACCCGAGCTCCACCGTCCCTGCTAATCTaGTGGCCTTTCAAACCTGGG +
Preference number: 4 (lower is better)
Translates to: FWGPRPHSVLVISTTRAPPSLLI*WPFKPG
Trigger: CCCAGGTTTGAAAGGCCATCAGATTAGCAGGGACGG...TGGAGCTCGGGTGGTGGAGATGACAAGGACACTGTGGGGTCTGGGTCCCCAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR TCA 90 bp CGAGCTCCAAGCCCTGCTCCTTGCTGCTCTAGGTTGGCCATCAGTTTTCCCTTCAGAAGGAACCTTGGGTaGTGCCCTACACCCCGTCCC +
Preference number: 4 (lower is better)
Translates to: RAPSPAPCCSRLAISFPFRRNLG*CPTPRP
Trigger: GGGACGGGGTGTAGGGCATCACCCAAGGTTCCTTCT...GAAGGGAAAACTGATGGCCAACCTAGAGCAGCAAGGAGCAGGGCTTGGAGCTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR TCA 90 bp CCCTGCTTTCTCCTTGTCCTGCCTGACCCACTGTCCCATCCTAGGAACGGTCCTCGCCCCAGGGTAGAATaGAACGTCTGGTCTGTCCTG +
Preference number: 4 (lower is better)
Translates to: PCFLLVLPDPLSHPRNGPRPRVE*NVWSVL
Trigger: CAGGACAGACCAGACGTTTCATTCTACCCTGGGGCG...AGGACCGTTCCTAGGATGGGACAGTGGGTCAGGCAGGACAAGGAGAAAGCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR TCA 90 bp GGGCCTAGAGTGGCCTGTAGCTCCAGAGTTCTGGGGACCCAGACCCCACAGTGTCTGGGAGATTCGATTTaGACACCTCAGTCGCTCTCC +
Preference number: 4 (lower is better)
Translates to: GPRVACSSRVLGTQTPQCLGDSI*TPQSLS
Trigger: GGAGAGCGACTGAGGTGTTCAAATCGAATCTCCCAG...ACACTGTGGGGTCTGGGTCCCCAGAACTCTGGAGCTACAGGCCACTCTAGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR TCA 90 bp ACACCTCAGTCGCTCTCCGAAGATTCCAGCCAGGTCCACTCACATCATGGCACAGGCAGGGGGCCTGTGTaGAGCAGTGCTGAGTGGGAA +
Preference number: 4 (lower is better)
Translates to: TPQSLSEDSSQVHSHHGTGRGPV*SSAEWE
Trigger: TTCCCACTCAGCACTGCTTCACACAGGCCCCCTGCC...TGTGCCATGATGTGAGTGGACCTGGCTGGAATCTTCGGAGAGCGACTGAGGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp GCTTCACATCTGTCTGCTACCTCTGTGCCCGACTTCCACTGCACTGCTCACTGCTTGCAGGGAGGGTGTTaGGTCTGGGGATGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: ASHLSATSVPDFHCTAHCLQGGC*VWGWWQ
Trigger: CTGCCACCATCCCCAGACGCAACACCCTCCCTGCAA...GCAGTGAGCAGTGCAGTGGAAGTCGGGCACAGAGGTAGCAGACAGATGTGAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp CTGCTACCTCTGTGCCCGACTTCCACTGCACTGCTCACTGCAAAGAAACTCACTCCTCTGCCCAGCCTGTaGCTGTCCCAGGGTTCCCCT +
Preference number: 4 (lower is better)
Translates to: LLPLCPTSTALLTAKKLTPLPSL*LSQGSP
Trigger: AGGGGAACCCTGGGACAGGCACAGGCTGGGCAGAGG...AGTGAGTTTCTTTGCAGTGAGCAGTGCAGTGGAAGTCGGGCACAGAGGTAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp CTGTCCCATCCTAGGAACGGTCCTCATGTCACACCACCATGCACACCACTCTTGCCCACTTGTGGCTGCTaGGGGTACAGGGAAGGCACC +
Preference number: 4 (lower is better)
Translates to: LSHPRNGPHVTPPCTPLLPTCGC*GYREGT
Trigger: GGTGCCTTCCCTGTACCCGCAGCAGCCACAAGTGGG...CAAGAGTGGTGTGCATGGTGGTGTGACATGAGGACCGTTCCTAGGATGGGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp CTGCTACCTCTGTGCCCGACTTCCACTGCACTGCTCACTGCAAAGAAACTCACTGGGCCCACTTGTGGCTaGTGCGGGTACAGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: LLPLCPTSTALLTAKKLTGPTCG*CGYREG
Trigger: GCCTTCCCTGTACCCGCAGCAGCCACAAGTGGGCCC...AGTGAGTTTCTTTGCAGTGAGCAGTGCAGTGGAAGTCGGGCACAGAGGTAGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp GTATTTCCCCACTTGCTACATGGCCTTCACCACTGCTTCACATCTGTCTGCTACTCCTCAGCCAGCCGGTaGACACCACGTCGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: VFPHLLHGLHHCFTSVCYSSASR*TPRRRR
Trigger: GCGGCGGCGACGTGGTGTGCACCGGCTGGCTGAGGA...GTAGCAGACAGATGTGAAGCAGTGGTGAAGGCCATGTAGCAAGTGGGGAAATAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361507.5
CDS-3UTR CCA 90 bp ATGGGGAAGGAAGAACTCTGGAAATGGGATAGGGGTGCTGGGCCGAGATGTCCCCCTGAGGTGCGCTGGTaGACAAGGTGGGCTGCATGT +
Preference number: 4 (lower is better)
Translates to: MGKEELWKWDRGAGPRCPPEVRW*TRWAAC
Trigger: ACATGCAGCCCACCTTGTCCACCAGCGCACCTCAGG...GGGACATCTCGGCCCAGCACCCCTATCCCATTTCCAGAGTTCTTCCTTCCCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp TTTGTCCTTCATCTTCTGCCTCTGCACCCCACAGCAGCTGTCCTGCCATGGCCTACTCCTGAGGTGCGCTaGTGGACAAGGTGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: FVLHLLPLHPTAAVLPWPTPEVR*WTRWAA
Trigger: TGCAGCCCACCTTGTCCACCAGCGCACCTCAGGAGT...AGGCCATGGCAGGACAGCTGCTGTGGGGTGCAGAGGCAGAAGATGAAGGACAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp CTGTCCCATCCTAGGAACGGTCCTCATGTCACACCACCATGCACACCACTCTTGAGGGGAGAGGGGAGATaGGAAGGGCCAGCTCTGGAG +
Preference number: 4 (lower is better)
Translates to: LSHPRNGPHVTPPCTPLLRGEGR*EGPALE
Trigger: CTCCAGAGCTGGCCCTTCCCATCTCCCCTCTCCCCT...CAAGAGTGGTGTGCATGGTGGTGTGACATGAGGACCGTTCCTAGGATGGGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp GGGCCTAGAGTGGCCTGTAGCTCCAGAGTTCTGGGGACCCAGACCCCACAGTGTTCCCCACTTGCTACATaGCCTTCACCACTGCTTCAC +
Preference number: 4 (lower is better)
Translates to: GPRVACSSRVLGTQTPQCSPLAT*PSPLLH
Trigger: GTGAAGCAGTGGTGAAGGCCATGTAGCAAGTGGGGA...ACACTGTGGGGTCTGGGTCCCCAGAACTCTGGAGCTACAGGCCACTCTAGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp TGCTTTCTCCTTGTCCTGCCTGACCCACTGTCCCATCCTAGGAACGGTCCTCATGTCTGGGCCCACTTGTaGCTGCTGCGGGTACAGGGA +
Preference number: 4 (lower is better)
Translates to: CFLLVLPDPLSHPRNGPHVWAHL*LLRVQG
Trigger: TCCCTGTACCCGCAGCAGCCACAAGTGGGCCCAGAC...ATGAGGACCGTTCCTAGGATGGGACAGTGGGTCAGGCAGGACAAGGAGAAAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp GCTTCACATCTGTCTGCTACCTCTGTGCCCGACTTCCACTGCACTGCTCACTGCACAGCCTGGATCTCTTaGGGACCCCCTCGGCAGGTA +
Preference number: 4 (lower is better)
Translates to: ASHLSATSVPDFHCTAHCTAWIS*GPPRQV
Trigger: TACCTGCCGAGGGGGTCCCCAAGAGATCCAGGCTGT...GCAGTGAGCAGTGCAGTGGAAGTCGGGCACAGAGGTAGCAGACAGATGTGAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp CGAGCTCCAAGCCCTGCTCCTTGCTGCTCTAGGTTGGCCATCAGTTTTCCCTTCACAGCCTGGATCTCTTaGGGACCCCCTCGGCAGGTA +
Preference number: 4 (lower is better)
Translates to: RAPSPAPCCSRLAISFPFTAWIS*GPPRQV
Trigger: TACCTGCCGAGGGGGTCCCCAAGAGATCCAGGCTGT...GAAGGGAAAACTGATGGCCAACCTAGAGCAGCAAGGAGCAGGGCTTGGAGCTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR TCA 90 bp TTTGTCCTTCATCTTCTGCCTCTGCACCCCACAGCAGCTGTCCTGCCATGGCCTCAGGGGGTTCAAACGTaGACAGAGTTGGCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: FVLHLLPLHPTAAVLPWPQGVQT*TELAGW
Trigger: CCAGCCAGCCAACTCTGTTCACGTTTGAACCCCCTG...AGGCCATGGCAGGACAGCTGCTGTGGGGTGCAGAGGCAGAAGATGAAGGACAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR TCA 90 bp CCCTGCTTTCTCCTTGTCCTGCCTGACCCACTGTCCCATCCTAGGAACGGTCCTGGGCTGCATGTGGTTTaGCACAGGGGGTTCAAACGT +
Preference number: 4 (lower is better)
Translates to: PCFLLVLPDPLSHPRNGPGLHVV*HRGFKR
Trigger: ACGTTTGAACCCCCTGTGTCAAACCACATGCAGCCC...AGGACCGTTCCTAGGATGGGACAGTGGGTCAGGCAGGACAAGGAGAAAGCAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR TCA 90 bp CCCTGCTTTCTCCTTGTCCTGCCTGACCCACTGTCCCATCCTAGGAACGGTCCTTTGACAGGGGGTGGCTaGATCTCACTTCCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: PCFLLVLPDPLSHPRNGPLTGGG*ISLPLL
Trigger: CAGCAGAGGAAGTGAGATTCAGCCACCCCCTGTCAA...AGGACCGTTCCTAGGATGGGACAGTGGGTCAGGCAGGACAAGGAGAAAGCAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR TCA 90 bp GCTTCACATCTGTCTGCTACCTCTGTGCCCGACTTCCACTGCACTGCTCACTGCTCCTACCCTGCGATCTaGCATACGCCACAGCCCATG +
Preference number: 4 (lower is better)
Translates to: ASHLSATSVPDFHCTAHCSYPAI*HTPQPM
Trigger: CATGGGCTGTGGCGTATGTCAGATCGCAGGGTAGGA...GCAGTGAGCAGTGCAGTGGAAGTCGGGCACAGAGGTAGCAGACAGATGTGAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR TCA 90 bp CGAGCTCCAAGCCCTGCTCCTTGCTGCTCTAGGTTGGCCATCAGTTTTCCCTTCAGAATCCACCTTCCCTaGTCCCCCACTCCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: RAPSPAPCCSRLAISFPFRIHLP*SPTPAS
Trigger: AGAGGCAGGAGTGGGGGATCAGGGAAGGTGGATTCT...GAAGGGAAAACTGATGGCCAACCTAGAGCAGCAAGGAGCAGGGCTTGGAGCTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR TCA 90 bp CGAGCTCCAAGCCCTGCTCCTTGCTGCTCTAGGTTGGCCATCAGTTTTCCCTTCTGGCCCCTACACTTCTaGGTGGCTGGACCCATATGC +
Preference number: 4 (lower is better)
Translates to: RAPSPAPCCSRLAISFPFWPLHF*VAGPIC
Trigger: GCATATGGGTCCAGCCACTCAGAAGTGTAGGGGCCA...GAAGGGAAAACTGATGGCCAACCTAGAGCAGCAAGGAGCAGGGCTTGGAGCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR TCA 90 bp TTCTGGGGACCCAGACCCCACAGTGTCCTTGTCATCTCCACCACCCGAGCTCCAGTAGTTTGGGGCCTGTaGGCCAGAGCTTTGCTTTCA +
Preference number: 4 (lower is better)
Translates to: FWGPRPHSVLVISTTRAPVVWGL*ARALLS
Trigger: TGAAAGCAAAGCTCTGGCTCACAGGCCCCAAACTAC...TGGAGCTCGGGTGGTGGAGATGACAAGGACACTGTGGGGTCTGGGTCCCCAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp CCCTGCTTTCTCCTTGTCCTGCCTGACCCACTGTCCCATCCTAGGAACGGTCCTGTGGACAAGGTGGGCTaGATGTGGTTTGACACAGGG +
Preference number: 4 (lower is better)
Translates to: PCFLLVLPDPLSHPRNGPVDKVG*MWFDTG
Trigger: CCCTGTGTCAAACCACATGCAGCCCACCTTGTCCAC...AGGACCGTTCCTAGGATGGGACAGTGGGTCAGGCAGGACAAGGAGAAAGCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp TGCTTTCTCCTTGTCCTGCCTGACCCACTGTCCCATCCTAGGAACGGTCCTCATGGGCAGGACTGTTCGTaGCACTGGGAACGGGAGATG +
Preference number: 4 (lower is better)
Translates to: CFLLVLPDPLSHPRNGPHGQDCS*HWEREM
Trigger: CATCTCCCGTTCCCAGTGGCACGAACAGTCCTGCCC...ATGAGGACCGTTCCTAGGATGGGACAGTGGGTCAGGCAGGACAAGGAGAAAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp CATGCCACCATAAATCACATGACAGCCTGGATCTCTTGGGGACCCCCTCGGCAGACGTCTGTCCACTCCTaGATGGTGTTCTGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: HATINHMTAWISWGPPRQTSVHS*MVFCRA
Trigger: GGCCCTGCAGAACACCATGCAGGAGTGGACAGACGT...CTGCCGAGGGGGTCCCCAAGAGATCCAGGCTGTCATGTGATTTATGGTGGCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp ACACCTCAGTCGCTCTCCGAAGATTCCAGCCAGGTCCACTCACATCATGGCACAGAAGGCTCTGAGGACTaGCGCACGTCTGTCCACTCC +
Preference number: 4 (lower is better)
Translates to: TPQSLSEDSSQVHSHHGTEGSED*RTSVHS
Trigger: GGAGTGGACAGACGTGCGGCAGTCCTCAGAGCCTTC...TGTGCCATGATGTGAGTGGACCTGGCTGGAATCTTCGGAGAGCGACTGAGGTGT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp CCCTGCTTTCTCCTTGTCCTGCCTGACCCACTGTCCCATCCTAGGAACGGTCCTTCTCGGAGAAGGTGCTaGCTAGAGCTGCTGAGCTCA +
Preference number: 4 (lower is better)
Translates to: PCFLLVLPDPLSHPRNGPSRRRC*LELLSS
Trigger: TGAGCTCAGCAGCTCTAGCCAGCACCTTCTCCGAGA...AGGACCGTTCCTAGGATGGGACAGTGGGTCAGGCAGGACAAGGAGAAAGCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp ATGGGGAAGGAAGAACTCTGGAAATGGGATAGGGGTGCTGGGCCGAGATGTCCCACAGAGTTGGCTGGCTaGAGTGTGATGGGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: MGKEELWKWDRGAGPRCPTELAG*SVMGLR
Trigger: CCTCAGCCCCATCACACTCCAGCCAGCCAACTCTGT...GGGACATCTCGGCCCAGCACCCCTATCCCATTTCCAGAGTTCTTCCTTCCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp ACACCTCAGTCGCTCTCCGAAGATTCCAGCCAGGTCCACTCACATCATGGCACAACTCCTGAGGTGCGCTaGTGGACAAGGTGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: TPQSLSEDSSQVHSHHGTTPEVR*WTRWAA
Trigger: TGCAGCCCACCTTGTCCACCAGCGCACCTCAGGAGT...TGTGCCATGATGTGAGTGGACCTGGCTGGAATCTTCGGAGAGCGACTGAGGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp CGAGCTCCAAGCCCTGCTCCTTGCTGCTCTAGGTTGGCCATCAGTTTTCCCTTCTGTTGCGTCTGGGGATaGTGGCAGCGACAGATCTGC +
Preference number: 4 (lower is better)
Translates to: RAPSPAPCCSRLAISFPFCCVWG*WQRQIC
Trigger: GCAGATCTGTCGCTGCCACCATCCCCAGACGCAACA...GAAGGGAAAACTGATGGCCAACCTAGAGCAGCAAGGAGCAGGGCTTGGAGCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp GGGCCTAGAGTGGCCTGTAGCTCCAGAGTTCTGGGGACCCAGACCCCACAGTGTAGTTGTCTTCAGAATTaGTGCTGTCCGATCGGCCCA +
Preference number: 4 (lower is better)
Translates to: GPRVACSSRVLGTQTPQCSCLQN*CCPIGP
Trigger: TGGGCCGATCGGACAGCACCAATTCTGAAGACAACT...ACACTGTGGGGTCTGGGTCCCCAGAACTCTGGAGCTACAGGCCACTCTAGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp GGGCCTAGAGTGGCCTGTAGCTCCAGAGTTCTGGGGACCCAGACCCCACAGTGTCAGGTCAAGTGGTGTTaGCTTTGCTTTCCGATCAGG +
Preference number: 4 (lower is better)
Translates to: GPRVACSSRVLGTQTPQCQVKWC*LCFPIR
Trigger: CCTGATCGGAAAGCAAAGCCAACACCACTTGACCTG...ACACTGTGGGGTCTGGGTCCCCAGAACTCTGGAGCTACAGGCCACTCTAGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp AGAGTGGCCTGTAGCTCCAGAGTTCTGGGGACCCAGACCCCACAGTGTCCTTGTGCCTCAGCCTCAAAGTaGGTTCCCTGCAGATGTCAG +
Preference number: 4 (lower is better)
Translates to: RVACSSRVLGTQTPQCPCASASK*VPCRCQ
Trigger: CTGACATCTGCAGGGAACCCACTTTGAGGCTGAGGC...ACAAGGACACTGTGGGGTCTGGGTCCCCAGAACTCTGGAGCTACAGGCCACTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp CTGTCCCATCCTAGGAACGGTCCTCATGTCACACCACCATGCACACCACTCTTGGCAGCTGTCCTGCCATaGCCTCAGCCTCAAAGTGGG +
Preference number: 4 (lower is better)
Translates to: LSHPRNGPHVTPPCTPLLAAVLP*PQPQSG
Trigger: CCCACTTTGAGGCTGAGGCCATGGCAGGACAGCTGC...CAAGAGTGGTGTGCATGGTGGTGTGACATGAGGACCGTTCCTAGGATGGGACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp CTGTCCCATCCTAGGAACGGTCCTCATGTCACACCACCATGCACACCACTCTTGCCTGCCCCATGTGCTTaGTCGCCCAGCTTGGTCCAA +
Preference number: 4 (lower is better)
Translates to: LSHPRNGPHVTPPCTPLLPAPCA*SPSLVQ
Trigger: TTGGACCAAGCTGGGCGACCAAGCACATGGGGCAGG...CAAGAGTGGTGTGCATGGTGGTGTGACATGAGGACCGTTCCTAGGATGGGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp CTGTCCCATCCTAGGAACGGTCCTCATGTCACACCACCATGCACACCACTCTTGTCCTTCTTCCTCCACTaGACCCAAGCCCTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: LSHPRNGPHVTPPCTPLLSFFLH*TQALPS
Trigger: GGAGGGCAGGGCTTGGGTCCAGTGGAGGAAGAAGGA...CAAGAGTGGTGTGCATGGTGGTGTGACATGAGGACCGTTCCTAGGATGGGACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp GCTTCACATCTGTCTGCTACCTCTGTGCCCGACTTCCACTGCACTGCTCACTGCGAGGCTGCAATAGTCTaGGCCCACTTGTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: ASHLSATSVPDFHCTAHCEAAIV*AHLWLL
Trigger: CAGCAGCCACAAGTGGGCCCAGACTATTGCAGCCTC...GCAGTGAGCAGTGCAGTGGAAGTCGGGCACAGAGGTAGCAGACAGATGTGAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp AGAGTGGCCTGTAGCTCCAGAGTTCTGGGGACCCAGACCCCACAGTGTCCTTGTGTAGTGGGTGGAGGGTaGGGATATGCTAGATACGGC +
Preference number: 4 (lower is better)
Translates to: RVACSSRVLGTQTPQCPCVVGGG*GYARYG
Trigger: GCCGTATCTAGCATATCCCCACCCTCCACCCACTAC...ACAAGGACACTGTGGGGTCTGGGTCCCCAGAACTCTGGAGCTACAGGCCACTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp TCACTTATTGGAACACCAAGGCATGGCCCCTACACTTCTGAGTGGCTGGACCCAGCTGAGCACCAGCTGTaGATGGGACCTCAGCGCAGC +
Preference number: 4 (lower is better)
Translates to: SLIGTPRHGPYTSEWLDPAEHQL*MGPQRS
Trigger: GCTGCGCTGAGGTCCCATCCACAGCTGGTGCTCAGC...TGGGTCCAGCCACTCAGAAGTGTAGGGGCCATGCCTTGGTGTTCCAATAAGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp CTGCTACCTCTGTGCCCGACTTCCACTGCACTGCTCACTGCAAAGAAACTCACTGCTGAGCACCAGCTGTaGATGGGACCTCAGCGCAGC +
Preference number: 4 (lower is better)
Translates to: LLPLCPTSTALLTAKKLTAEHQL*MGPQRS
Trigger: GCTGCGCTGAGGTCCCATCCACAGCTGGTGCTCAGC...AGTGAGTTTCTTTGCAGTGAGCAGTGCAGTGGAAGTCGGGCACAGAGGTAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp GGGCCTAGAGTGGCCTGTAGCTCCAGAGTTCTGGGGACCCAGACCCCACAGTGTCTCCTGAGACCAGTCTaGCTTCCCCTGCATTTTATG +
Preference number: 4 (lower is better)
Translates to: GPRVACSSRVLGTQTPQCLLRPV*LPLHFM
Trigger: CATAAAATGCAGGGGAAGCCAGACTGGTCTCAGGAG...ACACTGTGGGGTCTGGGTCCCCAGAACTCTGGAGCTACAGGCCACTCTAGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR CAA 72 bp CCATGTGTTCCTGCCCCATGTGCTTGGTCGCCCAGCTaGGTCCAAGCCTTCCCCTGTATGCTGCTTTCAAGG +
Preference number: 4 (lower is better)
Translates to: PCVPAPCAWSPS*VQAFPCMLLSR
Trigger: CCTTGAAAGCAGCATACAGGGGAAGGCTTGGACCAAGCTGGGCGACCAAGCACATGGGGCAGGAACACATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR TCA 90 bp TGCTTTCTCCTTGTCCTGCCTGACCCACTGTCCCATCCTAGGAACGGTCCTCATGAAGAGCGGGGGCCATaGCCGGCTGAGGAAACATTT +
Preference number: 4 (lower is better)
Translates to: CFLLVLPDPLSHPRNGPHEERGP*PAEETF
Trigger: AAATGTTTCCTCAGCCGGTCATGGCCCCCGCTCTTC...ATGAGGACCGTTCCTAGGATGGGACAGTGGGTCAGGCAGGACAAGGAGAAAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR TCA 90 bp AGAGTGGCCTGTAGCTCCAGAGTTCTGGGGACCCAGACCCCACAGTGTCCTTGTAGGGGAGTTCATCGATaGCGGTGTTGTTCCTCAGGT +
Preference number: 4 (lower is better)
Translates to: RVACSSRVLGTQTPQCPCRGVHR*RCCSSG
Trigger: ACCTGAGGAACAACACCGTCATCGATGAACTCCCCT...ACAAGGACACTGTGGGGTCTGGGTCCCCAGAACTCTGGAGCTACAGGCCACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR TCA 90 bp GGGCCTAGAGTGGCCTGTAGCTCCAGAGTTCTGGGGACCCAGACCCCACAGTGTAGACTTGGTGATAGGTaGCTTGAAGGGGAGTTCATC +
Preference number: 4 (lower is better)
Translates to: GPRVACSSRVLGTQTPQCRLGDR*LEGEFI
Trigger: GATGAACTCCCCTTCAAGTCACCTATCACCAAGTCT...ACACTGTGGGGTCTGGGTCCCCAGAACTCTGGAGCTACAGGCCACTCTAGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR TCA 90 bp CCCTGCTTTCTCCTTGTCCTGCCTGACCCACTGTCCCATCCTAGGAACGGTCCTATCAGAGGTGACGGATaGAGTAGATGGCTTGCGGTG +
Preference number: 4 (lower is better)
Translates to: PCFLLVLPDPLSHPRNGPIRGDG*SRWLAV
Trigger: CACCGCAAGCCATCTACTTCATCCGTCACCTCTGAT...AGGACCGTTCCTAGGATGGGACAGTGGGTCAGGCAGGACAAGGAGAAAGCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR TCA 90 bp ATGGGGAAGGAAGAACTCTGGAAATGGGATAGGGGTGCTGGGCCGAGATGTCCCCTTGTCTTCTGGGACTaGAGGAGAGGTAGCCCAGTG +
Preference number: 4 (lower is better)
Translates to: MGKEELWKWDRGAGPRCPLVFWD*RRGSPV
Trigger: CACTGGGCTACCTCTCCTTCAGTCCCAGAAGACAAG...GGGACATCTCGGCCCAGCACCCCTATCCCATTTCCAGAGTTCTTCCTTCCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR TCA 90 bp CGAGCTCCAAGCCCTGCTCCTTGCTGCTCTAGGTTGGCCATCAGTTTTCCCTTCGACTCCCTGGGTTGGTaGGACTTGTCTTCTGGGACT +
Preference number: 4 (lower is better)
Translates to: RAPSPAPCCSRLAISFPFDSLGW*DLSSGT
Trigger: AGTCCCAGAAGACAAGTCTCACCAACCCAGGGAGTC...GAAGGGAAAACTGATGGCCAACCTAGAGCAGCAAGGAGCAGGGCTTGGAGCTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR TCA 90 bp CTGCTACCTCTGTGCCCGACTTCCACTGCACTGCTCACTGCAAAGAAACTCACTCCTCAAGACCACTGCTaGGCCTCCGTCTCCACCATC +
Preference number: 4 (lower is better)
Translates to: LLPLCPTSTALLTAKKLTPQDHC*ASVSTI
Trigger: GATGGTGGAGACGGAGGCTCAGCAGTGGTCTTGAGG...AGTGAGTTTCTTTGCAGTGAGCAGTGCAGTGGAAGTCGGGCACAGAGGTAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR TCA 90 bp TCACTTATTGGAACACCAAGGCATGGCCCCTACACTTCTGAGTGGCTGGACCCACCTCAAGACCACTGCTaGGCCTCCGTCTCCACCATC +
Preference number: 4 (lower is better)
Translates to: SLIGTPRHGPYTSEWLDPPQDHC*ASVSTI
Trigger: GATGGTGGAGACGGAGGCTCAGCAGTGGTCTTGAGG...TGGGTCCAGCCACTCAGAAGTGTAGGGGCCATGCCTTGGTGTTCCAATAAGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR TCA 90 bp CCCTGCTTTCTCCTTGTCCTGCCTGACCCACTGTCCCATCCTAGGAACGGTCCTAGGAGAGGTGGACTTTaGCCCATGGATAGGCCAAAG +
Preference number: 4 (lower is better)
Translates to: PCFLLVLPDPLSHPRNGPRRGGL*PMDRPK
Trigger: CTTTGGCCTATCCATGGGTCAAAGTCCACCTCTCCT...AGGACCGTTCCTAGGATGGGACAGTGGGTCAGGCAGGACAAGGAGAAAGCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR TCA 90 bp TTTGTCCTTCATCTTCTGCCTCTGCACCCCACAGCAGCTGTCCTGCCATGGCCTAGAGGGAGGATGAGCTaGGCCCATGCTCCAGTAACT +
Preference number: 4 (lower is better)
Translates to: FVLHLLPLHPTAAVLPWPRGRMS*AHAPVT
Trigger: AGTTACTGGAGCATGGGCTCAGCTCATCCTCCCTCT...AGGCCATGGCAGGACAGCTGCTGTGGGGTGCAGAGGCAGAAGATGAAGGACAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp CTGCTACCTCTGTGCCCGACTTCCACTGCACTGCTCACTGCAAAGAAACTCACTCGCTCTCGGAGAAGGTaGTGGCTAGAGCTGCTGAGC +
Preference number: 4 (lower is better)
Translates to: LLPLCPTSTALLTAKKLTRSRRR*WLELLS
Trigger: GCTCAGCAGCTCTAGCCAGCACCTTCTCCGAGAGCG...AGTGAGTTTCTTTGCAGTGAGCAGTGCAGTGGAAGTCGGGCACAGAGGTAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp TTTGTCCTTCATCTTCTGCCTCTGCACCCCACAGCAGCTGTCCTGCCATGGCCTGAAAAGAGGCTCTGGTaGCCTGAGAGAAGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: FVLHLLPLHPTAAVLPWPEKRLW*PERSWH
Trigger: GTGCCAGCTTCTCTCAGGGCACCAGAGCCTCTTTTC...AGGCCATGGCAGGACAGCTGCTGTGGGGTGCAGAGGCAGAAGATGAAGGACAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp CTGTCCCATCCTAGGAACGGTCCTCATGTCACACCACCATGCACACCACTCTTGACGTCTGTCCACTCCTaGATGGTGTTCTGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: LSHPRNGPHVTPPCTPLLTSVHS*MVFCRA
Trigger: GGCCCTGCAGAACACCATGCAGGAGTGGACAGACGT...CAAGAGTGGTGTGCATGGTGGTGTGACATGAGGACCGTTCCTAGGATGGGACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp ACACCAACCTCCCTAAGTACTTCCTCTGCCCTCCATCAGCATTTGAAGTCTCTGGGCCAGCTCTGGAGATaGTGCCTCCTGGGCTCTGCG +
Preference number: 4 (lower is better)
Translates to: TPTSLSTSSALHQHLKSLGQLWR*CLLGSA
Trigger: CGCAGAGCCCAGGAGGCAGCATCTCCAGAGCTGGCC...CAGAGACTTCAAATGCTGATGGAGGGCAGAGGAAGTACTTAGGGAGGTTGGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp CGAGCTCCAAGCCCTGCTCCTTGCTGCTCTAGGTTGGCCATCAGTTTTCCCTTCAGCCCTGCTCCTTGCTaGTCTAGGTTGGCCATCAGT +
Preference number: 4 (lower is better)
Translates to: RAPSPAPCCSRLAISFPFSPAPC*SRLAIS
Trigger: ACTGATGGCCAACCTAGAGCAGCAAGGAGCAGGGCT...GAAGGGAAAACTGATGGCCAACCTAGAGCAGCAAGGAGCAGGGCTTGGAGCTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp CTGTCCCATCCTAGGAACGGTCCTCATGTCACACCACCATGCACACCACTCTTGTGTTCCTGCCCCATGTaGTTGGTCGCCCAGCTTGGT +
Preference number: 4 (lower is better)
Translates to: LSHPRNGPHVTPPCTPLLCSCPM*LVAQLG
Trigger: ACCAAGCTGGGCGACCAAGCACATGGGGCAGGAACA...CAAGAGTGGTGTGCATGGTGGTGTGACATGAGGACCGTTCCTAGGATGGGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp AGAGTGGCCTGTAGCTCCAGAGTTCTGGGGACCCAGACCCCACAGTGTCCTTGTGTGCCCGACTTCCACTaGACTGCTCACTGCAAAGAA +
Preference number: 4 (lower is better)
Translates to: RVACSSRVLGTQTPQCPCVPDFH*TAHCKE
Trigger: TTCTTTGCAGTGAGCAGTGCAGTGGAAGTCGGGCAC...ACAAGGACACTGTGGGGTCTGGGTCCCCAGAACTCTGGAGCTACAGGCCACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp ATGGGGAAGGAAGAACTCTGGAAATGGGATAGGGGTGCTGGGCCGAGATGTCCCCTTTCTGCTCCACCCTaGACCCCCAAGGATTGCGTT +
Preference number: 4 (lower is better)
Translates to: MGKEELWKWDRGAGPRCPLSAPP*TPKDCV
Trigger: AACGCAATCCTTGGGGGTGCAGGGTGGAGCAGAAAG...GGGACATCTCGGCCCAGCACCCCTATCCCATTTCCAGAGTTCTTCCTTCCCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp AGAGTGGCCTGTAGCTCCAGAGTTCTGGGGACCCAGACCCCACAGTGTCCTTGTGACTCGTTCCTACCCTaGGATCTGACATACGCCACA +
Preference number: 4 (lower is better)
Translates to: RVACSSRVLGTQTPQCPCDSFLP*DLTYAT
Trigger: TGTGGCGTATGTCAGATCGCAGGGTAGGAACGAGTC...ACAAGGACACTGTGGGGTCTGGGTCCCCAGAACTCTGGAGCTACAGGCCACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp CTGTCCCATCCTAGGAACGGTCCTCATGTCACACCACCATGCACACCACTCTTGACAGAGTTGGCTGGCTaGAGTGTGATGGGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: LSHPRNGPHVTPPCTPLLTELAG*SVMGLR
Trigger: CCTCAGCCCCATCACACTCCAGCCAGCCAACTCTGT...CAAGAGTGGTGTGCATGGTGGTGTGACATGAGGACCGTTCCTAGGATGGGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp CCCTGCTTTCTCCTTGTCCTGCCTGACCCACTGTCCCATCCTAGGAACGGTCCTAAGGTGGGCTGCATGTaGTTTGACACAGGGGGTTCA +
Preference number: 4 (lower is better)
Translates to: PCFLLVLPDPLSHPRNGPKVGCM*FDTGGS
Trigger: TGAACCCCCTGTGTCAAACCACATGCAGCCCACCTT...AGGACCGTTCCTAGGATGGGACAGTGGGTCAGGCAGGACAAGGAGAAAGCAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp TCACTTATTGGAACACCAAGGCATGGCCCCTACACTTCTGAGTGGCTGGACCCACCTGAGGTGCGCTGGTaGACAAGGTGGGCTGCATGT +
Preference number: 4 (lower is better)
Translates to: SLIGTPRHGPYTSEWLDPPEVRW*TRWAAC
Trigger: ACATGCAGCCCACCTTGTCCACCAGCGCACCTCAGG...TGGGTCCAGCCACTCAGAAGTGTAGGGGCCATGCCTTGGTGTTCCAATAAGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp TTTGTCCTTCATCTTCTGCCTCTGCACCCCACAGCAGCTGTCCTGCCATGGCCTTGTGCCGGCTCGGCTTaGGAAGGCTATAGAAGCCAT +
Preference number: 4 (lower is better)
Translates to: FVLHLLPLHPTAAVLPWPCAGSA*EGYRSH
Trigger: ATGGCTTCTATAGCCTTCCCAAGCCGAGCCGGCACA...AGGCCATGGCAGGACAGCTGCTGTGGGGTGCAGAGGCAGAAGATGAAGGACAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp CATGCCACCATAAATCACATGACAGCCTGGATCTCTTGGGGACCCCCTCGGCAGCTCTCCACCACGCTGTaGGTACTCGTAGGTCTCACA +
Preference number: 4 (lower is better)
Translates to: HATINHMTAWISWGPPRQLSTTL*VLVGLT
Trigger: TGTGAGACCTACGAGTACCCACAGCGTGGTGGAGAG...CTGCCGAGGGGGTCCCCAAGAGATCCAGGCTGTCATGTGATTTATGGTGGCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp CCCTGCTTTCTCCTTGTCCTGCCTGACCCACTGTCCCATCCTAGGAACGGTCCTCAACTCCATCACTCATaGATTCAGCAGACCGGCCTG +
Preference number: 4 (lower is better)
Translates to: PCFLLVLPDPLSHPRNGPQLHHS*IQQTGL
Trigger: CAGGCCGGTCTGCTGAATCCATGAGTGATGGAGTTG...AGGACCGTTCCTAGGATGGGACAGTGGGTCAGGCAGGACAAGGAGAAAGCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp CATGCCACCATAAATCACATGACAGCCTGGATCTCTTGGGGACCCCCTCGGCAGCACCTGCTCGTTCCATaGCCAACAGGGTGGAAGAAC +
Preference number: 4 (lower is better)
Translates to: HATINHMTAWISWGPPRQHLLVP*PTGWKN
Trigger: GTTCTTCCACCCTGTTGGCCATGGAACGAGCAGGTG...CTGCCGAGGGGGTCCCCAAGAGATCCAGGCTGTCATGTGATTTATGGTGGCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp AGAGTGGCCTGTAGCTCCAGAGTTCTGGGGACCCAGACCCCACAGTGTCCTTGTAAAGTGATGGGCCCCTaGGCTCATTGGGATGTAGAC +
Preference number: 4 (lower is better)
Translates to: RVACSSRVLGTQTPQCPCKVMGP*AHWDVD
Trigger: GTCTACATCCCAATGAGCCCAGGGGCCCATCACTTT...ACAAGGACACTGTGGGGTCTGGGTCCCCAGAACTCTGGAGCTACAGGCCACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp GTATTTCCCCACTTGCTACATGGCCTTCACCACTGCTTCACATCTGTCTGCTACGTAGATGGCTTGCGGTaGGGGCTTGGGGAGCTCGGC +
Preference number: 4 (lower is better)
Translates to: VFPHLLHGLHHCFTSVCYVDGLR*GLGELG
Trigger: GCCGAGCTCCCCAAGCCCCCACCGCAAGCCATCTAC...GTAGCAGACAGATGTGAAGCAGTGGTGAAGGCCATGTAGCAAGTGGGGAAATAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp TCACTTATTGGAACACCAAGGCATGGCCCCTACACTTCTGAGTGGCTGGACCCATCCTGGGCTCTGCGGTaGCCCTCTCATCACAGCTTG +
Preference number: 4 (lower is better)
Translates to: SLIGTPRHGPYTSEWLDPSWALR*PSHHSL
Trigger: CAAGCTGTGATGAGAGGGCCACCGCAGAGCCCAGGA...TGGGTCCAGCCACTCAGAAGTGTAGGGGCCATGCCTTGGTGTTCCAATAAGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp ATGGGGAAGGAAGAACTCTGGAAATGGGATAGGGGTGCTGGGCCGAGATGTCCCACTGAACGTGAGGTGTaGAATCTGGCTCAGAGCCCC +
Preference number: 4 (lower is better)
Translates to: MGKEELWKWDRGAGPRCPTEREV*NLAQSP
Trigger: GGGGCTCTGAGCCAGATTCCACACCTCACGTTCAGT...GGGACATCTCGGCCCAGCACCCCTATCCCATTTCCAGAGTTCTTCCTTCCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp CTGCTACCTCTGTGCCCGACTTCCACTGCACTGCTCACTGCAAAGAAACTCACTGCAGCTGTCCTGCCATaGCCTCAGCCTCAAAGTGGG +
Preference number: 4 (lower is better)
Translates to: LLPLCPTSTALLTAKKLTAAVLP*PQPQSG
Trigger: CCCACTTTGAGGCTGAGGCCATGGCAGGACAGCTGC...AGTGAGTTTCTTTGCAGTGAGCAGTGCAGTGGAAGTCGGGCACAGAGGTAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp CTGTCCCATCCTAGGAACGGTCCTCATGTCACACCACCATGCACACCACTCTTGGTAGCTCCAGAGTTCTaGGGACCCAGACCCCACAGT +
Preference number: 4 (lower is better)
Translates to: LSHPRNGPHVTPPCTPLLVAPEF*GPRPHS
Trigger: ACTGTGGGGTCTGGGTCCCCAGAACTCTGGAGCTAC...CAAGAGTGGTGTGCATGGTGGTGTGACATGAGGACCGTTCCTAGGATGGGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp ACCTCAGTCGCTCTCCGAAGATTCCAGCCAGGTCCACTCACATCATGGCACACTCTTGGTCGCCCAGCTTaGTCCAAGCCTTCCCCTGTA +
Preference number: 4 (lower is better)
Translates to: TSVALRRFQPGPLTSWHTLGRPA*SKPSPV
Trigger: TACAGGGGAAGGCTTGGACCAAGCTGGGCGACCAAG...AGTGTGCCATGATGTGAGTGGACCTGGCTGGAATCTTCGGAGAGCGACTGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp CATGCCACCATAAATCACATGACAGCCTGGATCTCTTGGGGACCCCCTCGGCAGATACGCCACAGCCCATaGGCACAAGCTGTCAGCCAT +
Preference number: 4 (lower is better)
Translates to: HATINHMTAWISWGPPRQIRHSP*AQAVSH
Trigger: ATGGCTGACAGCTTGTGCCCATGGGCTGTGGCGTAT...CTGCCGAGGGGGTCCCCAAGAGATCCAGGCTGTCATGTGATTTATGGTGGCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp GGGCCTAGAGTGGCCTGTAGCTCCAGAGTTCTGGGGACCCAGACCCCACAGTGTCTTCCATTCACTTATTaGAACACCAAGGCATGGCCC +
Preference number: 4 (lower is better)
Translates to: GPRVACSSRVLGTQTPQCLPFTY*NTKAWP
Trigger: GGGCCATGCCTTGGTGTTCCAATAAGTGAATGGAAG...ACACTGTGGGGTCTGGGTCCCCAGAACTCTGGAGCTACAGGCCACTCTAGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp TTTGTCCTTCATCTTCTGCCTCTGCACCCCACAGCAGCTGTCCTGCCATGGCCTAGCACCAGCTGTGGATaGGACCTCAGCGCAGCTAAT +
Preference number: 4 (lower is better)
Translates to: FVLHLLPLHPTAAVLPWPSTSCG*DLSAAN
Trigger: ATTAGCTGCGCTGAGGTCCCATCCACAGCTGGTGCT...AGGCCATGGCAGGACAGCTGCTGTGGGGTGCAGAGGCAGAAGATGAAGGACAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp TTCTGGGGACCCAGACCCCACAGTGTCCTTGTCATCTCCACCACCCGAGCTCCAGGGAAGGAAGAACTCTaGAAATGGGATAGGGGTGCT +
Preference number: 4 (lower is better)
Translates to: FWGPRPHSVLVISTTRAPGKEEL*KWDRGA
Trigger: AGCACCCCTATCCCATTTCCAGAGTTCTTCCTTCCC...TGGAGCTCGGGTGGTGGAGATGACAAGGACACTGTGGGGTCTGGGTCCCCAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR CAA 72 bp CAGGGGAAGGGTTCAGGGTCCCTGATGTCAAGTGCTTaGAAGGCTGAGACTGGCAGAGTAGAGAGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: QGKGSGSLMSSA*KAETGRVERRW
Trigger: CCACCTCCTCTCTACTCTGCCAGTCTCAGCCTTCAAAGCACTTGACATCAGGGACCCTGAACCCTTCCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR TCA 90 bp CTGCTACCTCTGTGCCCGACTTCCACTGCACTGCTCACTGCAAAGAAACTCACTCAGGGGGTTCAAACGTaGACAGAGTTGGCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: LLPLCPTSTALLTAKKLTQGVQT*TELAGW
Trigger: CCAGCCAGCCAACTCTGTTCACGTTTGAACCCCCTG...AGTGAGTTTCTTTGCAGTGAGCAGTGCAGTGGAAGTCGGGCACAGAGGTAGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR TCA 90 bp TTTGTCCTTCATCTTCTGCCTCTGCACCCCACAGCAGCTGTCCTGCCATGGCCTCTGTGTCACTCCTCATaGGAAAAGAGGCTCTGGTGC +
Preference number: 4 (lower is better)
Translates to: FVLHLLPLHPTAAVLPWPLCHSS*EKRLWC
Trigger: GCACCAGAGCCTCTTTTCTCATGAGGAGTGACACAG...AGGCCATGGCAGGACAGCTGCTGTGGGGTGCAGAGGCAGAAGATGAAGGACAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR TCA 90 bp GCTTCACATCTGTCTGCTACCTCTGTGCCCGACTTCCACTGCACTGCTCACTGCCAGGAAGAAGCTCGGTaGAGTCGGCTGTTGTCCATT +
Preference number: 4 (lower is better)
Translates to: ASHLSATSVPDFHCTAHCQEEAR*SRLLSI
Trigger: AATGGACAACAGCCGACTTCACCGAGCTTCTTCCTG...GCAGTGAGCAGTGCAGTGGAAGTCGGGCACAGAGGTAGCAGACAGATGTGAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR TCA 90 bp TGCTTTCTCCTTGTCCTGCCTGACCCACTGTCCCATCCTAGGAACGGTCCTCATTTGACAGGGGGTGGCTaGATCTCACTTCCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: CFLLVLPDPLSHPRNGPHLTGGG*ISLPLL
Trigger: CAGCAGAGGAAGTGAGATTCAGCCACCCCCTGTCAA...ATGAGGACCGTTCCTAGGATGGGACAGTGGGTCAGGCAGGACAAGGAGAAAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR TCA 90 bp CGAGCTCCAAGCCCTGCTCCTTGCTGCTCTAGGTTGGCCATCAGTTTTCCCTTCAGGGGAGTTCATCGATaGCGGTGTTGTTCCTCAGGT +
Preference number: 4 (lower is better)
Translates to: RAPSPAPCCSRLAISFPFRGVHR*RCCSSG
Trigger: ACCTGAGGAACAACACCGTCATCGATGAACTCCCCT...GAAGGGAAAACTGATGGCCAACCTAGAGCAGCAAGGAGCAGGGCTTGGAGCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR TCA 90 bp TTTGTCCTTCATCTTCTGCCTCTGCACCCCACAGCAGCTGTCCTGCCATGGCCTATCAGAGGTGACGGATaGAGTAGATGGCTTGCGGTG +
Preference number: 4 (lower is better)
Translates to: FVLHLLPLHPTAAVLPWPIRGDG*SRWLAV
Trigger: CACCGCAAGCCATCTACTTCATCCGTCACCTCTGAT...AGGCCATGGCAGGACAGCTGCTGTGGGGTGCAGAGGCAGAAGATGAAGGACAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR TCA 90 bp TGTAGCTACCACCACTGCTTCCATTCACTTATTGGAACACCAAGGCATGGCCCCACCCTTGGAAGGCTCTaGGGACTGCCGCACGTCTGT +
Preference number: 4 (lower is better)
Translates to: CSYHHCFHSLIGTPRHGPTLGRL*GLPHVC
Trigger: ACAGACGTGCGGCAGTCCTCAGAGCCTTCCAAGGGT...GGGGCCATGCCTTGGTGTTCCAATAAGTGAATGGAAGCAGTGGTGGTAGCTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR TCA 90 bp AGCTTTCCCTCTTCATCTGGGCATCTAAGTCCTTTACCCCTCAAGACCACTGCTGCAGAGGAGGTGCCTTaGTCAGGCCCTCACCTCCCA +
Preference number: 4 (lower is better)
Translates to: SFPSSSGHLSPLPLKTTAAEEVP*SGPHLP
Trigger: TGGGAGGTGAGGGCCTGATCAAGGCACCTCCTCTGC...AGCAGTGGTCTTGAGGGGTAAAGGACTTAGATGCCCAGATGAAGAGGGAAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR TCA 90 bp CGAGCTCCAAGCCCTGCTCCTTGCTGCTCTAGGTTGGCCATCAGTTTTCCCTTCAGGCCATTGGTCTGGTaGACTATGCATGCTCATGGG +
Preference number: 4 (lower is better)
Translates to: RAPSPAPCCSRLAISFPFRPLVW*TMHAHG
Trigger: CCCATGAGCATGCATAGTTCACCAGACCAATGGCCT...GAAGGGAAAACTGATGGCCAACCTAGAGCAGCAAGGAGCAGGGCTTGGAGCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR TCA 90 bp CGAGCTCCAAGCCCTGCTCCTTGCTGCTCTAGGTTGGCCATCAGTTTTCCCTTCAGGAGAGGTGGACTTTaGCCCATGGATAGGCCAAAG +
Preference number: 4 (lower is better)
Translates to: RAPSPAPCCSRLAISFPFRRGGL*PMDRPK
Trigger: CTTTGGCCTATCCATGGGTCAAAGTCCACCTCTCCT...GAAGGGAAAACTGATGGCCAACCTAGAGCAGCAAGGAGCAGGGCTTGGAGCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp GCCTCTGACACCAACCTCCCTAAGTACTTCCTCTGCCCTCCATCAGCATTTGAACGCTCTCGGAGAAGGTaGTGGCTAGAGCTGCTGAGC +
Preference number: 4 (lower is better)
Translates to: ASDTNLPKYFLCPPSAFERSRRR*WLELLS
Trigger: GCTCAGCAGCTCTAGCCAGCACCTTCTCCGAGAGCG...TTCAAATGCTGATGGAGGGCAGAGGAAGTACTTAGGGAGGTTGGTGTCAGAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp CTGCTACCTCTGTGCCCGACTTCCACTGCACTGCTCACTGCAAAGAAACTCACTGAGATACTCCTGAGGTaGGCTGGTGGACAAGGTGGG +
Preference number: 4 (lower is better)
Translates to: LLPLCPTSTALLTAKKLTEILLR*AGGQGG
Trigger: CCCACCTTGTCCACCAGCGCACCTCAGGAGTATCTC...AGTGAGTTTCTTTGCAGTGAGCAGTGCAGTGGAAGTCGGGCACAGAGGTAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp TTCTGGGGACCCAGACCCCACAGTGTCCTTGTCATCTCCACCACCCGAGCTCCACTGCTCTTCGGCTTATaGACTGGTGCAAGTAGAGAT +
Preference number: 4 (lower is better)
Translates to: FWGPRPHSVLVISTTRAPLLFGL*TGASRD
Trigger: ATCTCTACTTGCACCAGTGCATAAGCCGAAGAGCAG...TGGAGCTCGGGTGGTGGAGATGACAAGGACACTGTGGGGTCTGGGTCCCCAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp AGAGTGGCCTGTAGCTCCAGAGTTCTGGGGACCCAGACCCCACAGTGTCCTTGTGAAGCTGGCACTCCTTaGATTTTCTGCTCTTCGGCT +
Preference number: 4 (lower is better)
Translates to: RVACSSRVLGTQTPQCPCEAGTP*IFCSSA
Trigger: AGCCGAAGAGCAGAAAATGCAAGGAGTGCCAGCTTC...ACAAGGACACTGTGGGGTCTGGGTCCCCAGAACTCTGGAGCTACAGGCCACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp TGCTTTCTCCTTGTCCTGCCTGACCCACTGTCCCATCCTAGGAACGGTCCTCATTCGGCTGTTGTCCATTaGAGGGAGGGTGTTGCGTCT +
Preference number: 4 (lower is better)
Translates to: CFLLVLPDPLSHPRNGPHSAVVH*REGVAS
Trigger: AGACGCAACACCCTCCCTGCAATGGACAACAGCCGA...ATGAGGACCGTTCCTAGGATGGGACAGTGGGTCAGGCAGGACAAGGAGAAAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp ACCTCAGTCGCTCTCCGAAGATTCCAGCCAGGTCCACTCACATCATGGCACACTTCGGCTGTTGTCCATTaGAGGGAGGGTGTTGCGTCT +
Preference number: 4 (lower is better)
Translates to: TSVALRRFQPGPLTSWHTSAVVH*REGVAS
Trigger: AGACGCAACACCCTCCCTGCAATGGACAACAGCCGA...AGTGTGCCATGATGTGAGTGGACCTGGCTGGAATCTTCGGAGAGCGACTGAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp TGTAGCTACCACCACTGCTTCCATTCACTTATTGGAACACCAAGGCATGGCCCCTTCAGCAGACCGGCCTaGACTCTCTCCACCACGCTG +
Preference number: 4 (lower is better)
Translates to: CSYHHCFHSLIGTPRHGPFSRPA*TLSTTL
Trigger: CAGCGTGGTGGAGAGAGTGCAGGCCGGTCTGCTGAA...GGGGCCATGCCTTGGTGTTCCAATAAGTGAATGGAAGCAGTGGTGGTAGCTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp TCACTTATTGGAACACCAAGGCATGGCCCCTACACTTCTGAGTGGCTGGACCCACTGCTGGGGCCTCGGTaGACAGGAAGGGTTGTTGAT +
Preference number: 4 (lower is better)
Translates to: SLIGTPRHGPYTSEWLDPLLGPR*TGRVVD
Trigger: ATCAACAACCCTTCCTGTGCACCGAGGCCCCAGCAG...TGGGTCCAGCCACTCAGAAGTGTAGGGGCCATGCCTTGGTGTTCCAATAAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp TGTAGCTACCACCACTGCTTCCATTCACTTATTGGAACACCAAGGCATGGCCCCGGGCAGGACTGTTCGTaGCACTGGGAACGGGAGATG +
Preference number: 4 (lower is better)
Translates to: CSYHHCFHSLIGTPRHGPGQDCS*HWEREM
Trigger: CATCTCCCGTTCCCAGTGGCACGAACAGTCCTGCCC...GGGGCCATGCCTTGGTGTTCCAATAAGTGAATGGAAGCAGTGGTGGTAGCTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp TGTATTTCCCCACTTGCTACATGGCCTTCACCACTGCTTCACATCTGTCTGCTAGGCCAGCTCTGGAGATaGTGCCTCCTGGGCTCTGCG +
Preference number: 4 (lower is better)
Translates to: CISPLATWPSPLLHICLLGQLWR*CLLGSA
Trigger: CGCAGAGCCCAGGAGGCAGCATCTCCAGAGCTGGCC...TAGCAGACAGATGTGAAGCAGTGGTGAAGGCCATGTAGCAAGTGGGGAAATACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp TCACTTATTGGAACACCAAGGCATGGCCCCTACACTTCTGAGTGGCTGGACCCACCAAGCCCTGCTCCTTaGTGCTCTAGGTTGGCCATC +
Preference number: 4 (lower is better)
Translates to: SLIGTPRHGPYTSEWLDPPSPAP*CSRLAI
Trigger: GATGGCCAACCTAGAGCAGCAAGGAGCAGGGCTTGG...TGGGTCCAGCCACTCAGAAGTGTAGGGGCCATGCCTTGGTGTTCCAATAAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp CGAGCTCCAAGCCCTGCTCCTTGCTGCTCTAGGTTGGCCATCAGTTTTCCCTTCAAGCCTTCCCCTGTATaGTGCTTTCAAGGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: RAPSPAPCCSRLAISFPFKPSPV*CFQGGA
Trigger: AGCCCCACCTTGAAAGCAGCATACAGGGGAAGGCTT...GAAGGGAAAACTGATGGCCAACCTAGAGCAGCAAGGAGCAGGGCTTGGAGCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp GCTTCACATCTGTCTGCTACCTCTGTGCCCGACTTCCACTGCACTGCTCACTGCTTTACCATGTGTTCCTaGCCCATGTGCTTGGTCGCC +
Preference number: 4 (lower is better)
Translates to: ASHLSATSVPDFHCTAHCFTMCS*PMCLVA
Trigger: GGCGACCAAGCACATGGGGCAGGAACACATGGTAAA...GCAGTGAGCAGTGCAGTGGAAGTCGGGCACAGAGGTAGCAGACAGATGTGAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp GTATTTCCCCACTTGCTACATGGCCTTCACCACTGCTTCACATCTGTCTGCTACCACTGCAGAGTCCCCTaGACTGCCCTGTGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: VFPHLLHGLHHCFTSVCYHCRVP*TALCLC
Trigger: GCAGAGGCACAGGGCAGTGCAGGGGACTCTGCAGTG...GTAGCAGACAGATGTGAAGCAGTGGTGAAGGCCATGTAGCAAGTGGGGAAATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp AGAGTGGCCTGTAGCTCCAGAGTTCTGGGGACCCAGACCCCACAGTGTCCTTGTCACTGCACTGCTCACTaGAAAGAAACTCACTTCCCG +
Preference number: 4 (lower is better)
Translates to: RVACSSRVLGTQTPQCPCHCTAH*KETHFP
Trigger: CGGGAAGTGAGTTTCTTTGCAGTGAGCAGTGCAGTG...ACAAGGACACTGTGGGGTCTGGGTCCCCAGAACTCTGGAGCTACAGGCCACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp CTGTCCCATCCTAGGAACGGTCCTCATGTCACACCACCATGCACACCACTCTTGTGTCTGCTACCTCTGTaGCCGACTTCCACTGCACTG +
Preference number: 4 (lower is better)
Translates to: LSHPRNGPHVTPPCTPLLCLLPL*PTSTAL
Trigger: CAGTGCAGTGGAAGTCGGGCACAGAGGTAGCAGACA...CAAGAGTGGTGTGCATGGTGGTGTGACATGAGGACCGTTCCTAGGATGGGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp CCCTGCTTTCTCCTTGTCCTGCCTGACCCACTGTCCCATCCTAGGAACGGTCCTCATGGCCTTCACCACTaGTTCACATCTGTCTGCTAC +
Preference number: 4 (lower is better)
Translates to: PCFLLVLPDPLSHPRNGPHGLHH*FTSVCY
Trigger: GTAGCAGACAGATGTGAAGCAGTGGTGAAGGCCATG...AGGACCGTTCCTAGGATGGGACAGTGGGTCAGGCAGGACAAGGAGAAAGCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp CTGTCCCATCCTAGGAACGGTCCTCATGTCACACCACCATGCACACCACTCTTGGCTTTCTCCTTGTCCTaGCTGACCCACTGTCCCATC +
Preference number: 4 (lower is better)
Translates to: LSHPRNGPHVTPPCTPLLAFSLS*LTHCPI
Trigger: GATGGGACAGTGGGTCAGGCAGGACAAGGAGAAAGC...CAAGAGTGGTGTGCATGGTGGTGTGACATGAGGACCGTTCCTAGGATGGGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp CGAGCTCCAAGCCCTGCTCCTTGCTGCTCTAGGTTGGCCATCAGTTTTCCCTTCACAAGCTGTCAGCCATaGCTGATGTGGTCCTCTAGG +
Preference number: 4 (lower is better)
Translates to: RAPSPAPCCSRLAISFPFTSCQP*LMWSSR
Trigger: CCTAGAGGACCACATCAGGCATGGCTGACAGCTTGT...GAAGGGAAAACTGATGGCCAACCTAGAGCAGCAAGGAGCAGGGCTTGGAGCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp TGCTTTCTCCTTGTCCTGCCTGACCCACTGTCCCATCCTAGGAACGGTCCTCATCGCTGGTGGACAAGGTaGGCTGCATGTGGTTTGACA +
Preference number: 4 (lower is better)
Translates to: CFLLVLPDPLSHPRNGPHRWWTR*AACGLT
Trigger: TGTCAAACCACATGCAGCCCACCTTGTCCACCAGCG...ATGAGGACCGTTCCTAGGATGGGACAGTGGGTCAGGCAGGACAAGGAGAAAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp TCACTTATTGGAACACCAAGGCATGGCCCCTACACTTCTGAGTGGCTGGACCCATCTCACTTCCTCTGCTaGGGCCTCGGTGCACAGGAA +
Preference number: 4 (lower is better)
Translates to: SLIGTPRHGPYTSEWLDPSHFLC*GLGAQE
Trigger: TTCCTGTGCACCGAGGCCCCAGCAGAGGAAGTGAGA...TGGGTCCAGCCACTCAGAAGTGTAGGGGCCATGCCTTGGTGTTCCAATAAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp ACACCTCAGTCGCTCTCCGAAGATTCCAGCCAGGTCCACTCACATCATGGCACAGACTGTTCGTGCCACTaGGAACGGGAGATGCAGACA +
Preference number: 4 (lower is better)
Translates to: TPQSLSEDSSQVHSHHGTDCSCH*EREMQT
Trigger: TGTCTGCATCTCCCGTTCCCAGTGGCACGAACAGTC...TGTGCCATGATGTGAGTGGACCTGGCTGGAATCTTCGGAGAGCGACTGAGGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp TGTAGCTACCACCACTGCTTCCATTCACTTATTGGAACACCAAGGCATGGCCCCTCCTGGGCTCTGCGGTaGCCCTCTCATCACAGCTTG +
Preference number: 4 (lower is better)
Translates to: CSYHHCFHSLIGTPRHGPSWALR*PSHHSL
Trigger: CAAGCTGTGATGAGAGGGCCACCGCAGAGCCCAGGA...GGGGCCATGCCTTGGTGTTCCAATAAGTGAATGGAAGCAGTGGTGGTAGCTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp ACACCAACCTCCCTAAGTACTTCCTCTGCCCTCCATCAGCATTTGAAGTCTCTGAGGGGAGAGGGGAGATaGGAAGGGCCAGCTCTGGAG +
Preference number: 4 (lower is better)
Translates to: TPTSLSTSSALHQHLKSLRGEGR*EGPALE
Trigger: CTCCAGAGCTGGCCCTTCCCATCTCCCCTCTCCCCT...CAGAGACTTCAAATGCTGATGGAGGGCAGAGGAAGTACTTAGGGAGGTTGGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp ACACCTCAGTCGCTCTCCGAAGATTCCAGCCAGGTCCACTCACATCATGGCACAGATAAAAATCACAGCTaGGCCCCGAGTGGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: TPQSLSEDSSQVHSHHGTDKNHS*APSGQR
Trigger: CCTCTGCCCACTCGGGGCCCAGCTGTGATTTTTATC...TGTGCCATGATGTGAGTGGACCTGGCTGGAATCTTCGGAGAGCGACTGAGGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp AGAGTGGCCTGTAGCTCCAGAGTTCTGGGGACCCAGACCCCACAGTGTCCTTGTTGGTCCTTGACTCCCTaGGTTGGTGAGACTTGTCTT +
Preference number: 4 (lower is better)
Translates to: RVACSSRVLGTQTPQCPCWSLTP*VGETCL
Trigger: AAGACAAGTCTCACCAACCCAGGGAGTCAAGGACCA...ACAAGGACACTGTGGGGTCTGGGTCCCCAGAACTCTGGAGCTACAGGCCACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp TCACTTATTGGAACACCAAGGCATGGCCCCTACACTTCTGAGTGGCTGGACCCACCCTTGGGCCTAGAGTaGCCTGTAGCTCCAGAGTTC +
Preference number: 4 (lower is better)
Translates to: SLIGTPRHGPYTSEWLDPPLGLE*PVAPEF
Trigger: GAACTCTGGAGCTACAGGCCACTCTAGGCCCAAGGG...TGGGTCCAGCCACTCAGAAGTGTAGGGGCCATGCCTTGGTGTTCCAATAAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp AGCTTTCCCTCTTCATCTGGGCATCTAAGTCCTTTACCCCTCAAGACCACTGCTATGCTGCTTTCAAGGTaGGGCTGGCGGGGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: SFPSSSGHLSPLPLKTTAMLLSR*GWRGPL
Trigger: CAGAGGCCCCCGCCAGCCCCACCTTGAAAGCAGCAT...AGCAGTGGTCTTGAGGGGTAAAGGACTTAGATGCCCAGATGAAGAGGGAAAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp ACACCAACCTCCCTAAGTACTTCCTCTGCCCTCCATCAGCATTTGAAGTCTCTGATGCTGCTTTCAAGGTaGGGCTGGCGGGGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: TPTSLSTSSALHQHLKSLMLLSR*GWRGPL
Trigger: CAGAGGCCCCCGCCAGCCCCACCTTGAAAGCAGCAT...CAGAGACTTCAAATGCTGATGGAGGGCAGAGGAAGTACTTAGGGAGGTTGGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp CTGCTACCTCTGTGCCCGACTTCCACTGCACTGCTCACTGCAAAGAAACTCACTCTTGGTCGCCCAGCTTaGTCCAAGCCTTCCCCTGTA +
Preference number: 4 (lower is better)
Translates to: LLPLCPTSTALLTAKKLTLGRPA*SKPSPV
Trigger: TACAGGGGAAGGCTTGGACCAAGCTGGGCGACCAAG...AGTGAGTTTCTTTGCAGTGAGCAGTGCAGTGGAAGTCGGGCACAGAGGTAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp AGAGTGGCCTGTAGCTCCAGAGTTCTGGGGACCCAGACCCCACAGTGTCCTTGTATGGCCTTTCAAACCTaGGGAGGAGAGTCCAAGATG +
Preference number: 4 (lower is better)
Translates to: RVACSSRVLGTQTPQCPCMAFQT*GGESKM
Trigger: CATCTTGGACTCTCCTCCCCAGGTTTGAAAGGCCAT...ACAAGGACACTGTGGGGTCTGGGTCCCCAGAACTCTGGAGCTACAGGCCACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp GCCTCTGACACCAACCTCCCTAAGTACTTCCTCTGCCCTCCATCAGCATTTGAATCCTTCTTCCTCCACTaGACCCAAGCCCTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: ASDTNLPKYFLCPPSAFESFFLH*TQALPS
Trigger: GGAGGGCAGGGCTTGGGTCCAGTGGAGGAAGAAGGA...TTCAAATGCTGATGGAGGGCAGAGGAAGTACTTAGGGAGGTTGGTGTCAGAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp AGAGTGGCCTGTAGCTCCAGAGTTCTGGGGACCCAGACCCCACAGTGTCCTTGTGTGGACTTTGACCCATaGATAGGCCAAAGGACCAGT +
Preference number: 4 (lower is better)
Translates to: RVACSSRVLGTQTPQCPCVDFDP*IGQRTS
Trigger: ACTGGTCCTTTGGCCTATCCATGGGTCAAAGTCCAC...ACAAGGACACTGTGGGGTCTGGGTCCCCAGAACTCTGGAGCTACAGGCCACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp GTATTTCCCCACTTGCTACATGGCCTTCACCACTGCTTCACATCTGTCTGCTACGCCGAGATGTCCCCATaGGAGAAGGGGCCAGAGGGA +
Preference number: 4 (lower is better)
Translates to: VFPHLLHGLHHCFTSVCYAEMSP*EKGPEG
Trigger: TCCCTCTGGCCCCTTCTCCCATGGGGACATCTCGGC...GTAGCAGACAGATGTGAAGCAGTGGTGAAGGCCATGTAGCAAGTGGGGAAATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp CTGTCCCATCCTAGGAACGGTCCTCATGTCACACCACCATGCACACCACTCTTGGCAGGTACCCCATTGTaGTCCCAGGTCCTAAACAGC +
Preference number: 4 (lower is better)
Translates to: LSHPRNGPHVTPPCTPLLAGTPL*SQVLNS
Trigger: GCTGTTTAGGACCTGGGACCACAATGGGGTACCTGC...CAAGAGTGGTGTGCATGGTGGTGTGACATGAGGACCGTTCCTAGGATGGGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp ACCTCAGTCGCTCTCCGAAGATTCCAGCCAGGTCCACTCACATCATGGCACACTGCAGGTACCCCATTGTaGTCCCAGGTCCTAAACAGC +
Preference number: 4 (lower is better)
Translates to: TSVALRRFQPGPLTSWHTAGTPL*SQVLNS
Trigger: GCTGTTTAGGACCTGGGACCACAATGGGGTACCTGC...AGTGTGCCATGATGTGAGTGGACCTGGCTGGAATCTTCGGAGAGCGACTGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp CGAGCTCCAAGCCCTGCTCCTTGCTGCTCTAGGTTGGCCATCAGTTTTCCCTTCAATCACATGACAGCCTaGATCTCTTGGGGACCCCCT +
Preference number: 4 (lower is better)
Translates to: RAPSPAPCCSRLAISFPFNHMTA*ISWGPP
Trigger: AGGGGGTCCCCAAGAGATCCAGGCTGTCATGTGATT...GAAGGGAAAACTGATGGCCAACCTAGAGCAGCAAGGAGCAGGGCTTGGAGCTCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR CAA 72 bp ACATGTTTATGGGAGGCTGCAATAGTCTGGGCCCACTaGTGGCTGCTGCGGGTACAGGGAAGGCACCAGTTA +
Preference number: 4 (lower is better)
Translates to: TCLWEAAIVWAH*WLLRVQGRHQL
Trigger: TAACTGGTGCCTTCCCTGTACCCGCAGCAGCCACAAGTGGGCCCAGACTATTGCAGCCTCCCATAAACATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR TCA 90 bp TGTAGCTACCACCACTGCTTCCATTCACTTATTGGAACACCAAGGCATGGCCCCGAAGAGCGGGGGCCATaGCCGGCTGAGGAAACATTT +
Preference number: 4 (lower is better)
Translates to: CSYHHCFHSLIGTPRHGPEERGP*PAEETF
Trigger: AAATGTTTCCTCAGCCGGTCATGGCCCCCGCTCTTC...GGGGCCATGCCTTGGTGTTCCAATAAGTGAATGGAAGCAGTGGTGGTAGCTACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR TCA 90 bp TTTGTCCTTCATCTTCTGCCTCTGCACCCCACAGCAGCTGTCCTGCCATGGCCTCGTAGGTACTGTCTCTaGATTCTGTATTGTGCCGGC +
Preference number: 4 (lower is better)
Translates to: FVLHLLPLHPTAAVLPWPRRYCL*ILYCAG
Trigger: GCCGGCACAATACAGAATTCAGAGACAGTACCTACG...AGGCCATGGCAGGACAGCTGCTGTGGGGTGCAGAGGCAGAAGATGAAGGACAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR TCA 90 bp TCACTTATTGGAACACCAAGGCATGGCCCCTACACTTCTGAGTGGCTGGACCCATGGTTTGCTGGTCCTTaGCTCCCTGGGTTGGTGAGA +
Preference number: 4 (lower is better)
Translates to: SLIGTPRHGPYTSEWLDPWFAGP*LPGLVR
Trigger: TCTCACCAACCCAGGGAGTCAAGGACCAGCAAACCA...TGGGTCCAGCCACTCAGAAGTGTAGGGGCCATGCCTTGGTGTTCCAATAAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR TCA 90 bp GCCTCTGACACCAACCTCCCTAAGTACTTCCTCTGCCCTCCATCAGCATTTGAATCCTACCCTGCGATCTaGCATACGCCACAGCCCATG +
Preference number: 4 (lower is better)
Translates to: ASDTNLPKYFLCPPSAFESYPAI*HTPQPM
Trigger: CATGGGCTGTGGCGTATGTCAGATCGCAGGGTAGGA...TTCAAATGCTGATGGAGGGCAGAGGAAGTACTTAGGGAGGTTGGTGTCAGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR TCA 90 bp TGTATTTCCCCACTTGCTACATGGCCTTCACCACTGCTTCACATCTGTCTGCTAAGAGGGCGGATGAGCTaGGGAAACACTGGGCCGGCA +
Preference number: 4 (lower is better)
Translates to: CISPLATWPSPLLHICLLRGRMS*GNTGPA
Trigger: TGCCGGCCCAGTGTTTCCTCAGCTCATCCGCCCTCT...TAGCAGACAGATGTGAAGCAGTGGTGAAGGCCATGTAGCAAGTGGGGAAATACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR TCA 90 bp ACACCTCAGTCGCTCTCCGAAGATTCCAGCCAGGTCCACTCACATCATGGCACACTGGGAGATTCGATTTaGACACCTCAGTCGCTCTCC +
Preference number: 4 (lower is better)
Translates to: TPQSLSEDSSQVHSHHGTLGDSI*TPQSLS
Trigger: GGAGAGCGACTGAGGTGTTCAAATCGAATCTCCCAG...TGTGCCATGATGTGAGTGGACCTGGCTGGAATCTTCGGAGAGCGACTGAGGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR TCA 90 bp TCACTTATTGGAACACCAAGGCATGGCCCCTACACTTCTGAGTGGCTGGACCCAAGAGGGAGGATGAGCTaGGCCCATGCTCCAGTAACT +
Preference number: 4 (lower is better)
Translates to: SLIGTPRHGPYTSEWLDPRGRMS*AHAPVT
Trigger: AGTTACTGGAGCATGGGCTCAGCTCATCCTCCCTCT...TGGGTCCAGCCACTCAGAAGTGTAGGGGCCATGCCTTGGTGTTCCAATAAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp ATGGGGAAGGAAGAACTCTGGAAATGGGATAGGGGTGCTGGGCCGAGATGTCCCAGGCCTGCATCTACCTaGTCACAGAAGTTCAGGTTG +
Preference number: 4 (lower is better)
Translates to: MGKEELWKWDRGAGPRCPRPAST*SQKFRL
Trigger: CAACCTGAACTTCTGTGAGCAGGTAGATGCAGGCCT...GGGACATCTCGGCCCAGCACCCCTATCCCATTTCCAGAGTTCTTCCTTCCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp CGAGCTCCAAGCCCTGCTCCTTGCTGCTCTAGGTTGGCCATCAGTTTTCCCTTCAGGCCTGCATCTACCTaGTCACAGAAGTTCAGGTTG +
Preference number: 4 (lower is better)
Translates to: RAPSPAPCCSRLAISFPFRPAST*SQKFRL
Trigger: CAACCTGAACTTCTGTGAGCAGGTAGATGCAGGCCT...GAAGGGAAAACTGATGGCCAACCTAGAGCAGCAAGGAGCAGGGCTTGGAGCTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp TTCTGGGGACCCAGACCCCACAGTGTCCTTGTCATCTCCACCACCCGAGCTCCAACTCCTTGCATTTTCTaGTCTTCGGCTTATGCACTG +
Preference number: 4 (lower is better)
Translates to: FWGPRPHSVLVISTTRAPTPCIF*SSAYAL
Trigger: CAGTGCATAAGCCGAAGAGCAGAAAATGCAAGGAGT...TGGAGCTCGGGTGGTGGAGATGACAAGGACACTGTGGGGTCTGGGTCCCCAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp ACCTCAGTCGCTCTCCGAAGATTCCAGCCAGGTCCACTCACATCATGGCACACTCTGAATTCTGTATTGTaGCGGCTCGGCTTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: TSVALRRFQPGPLTSWHTLNSVL*RLGLGR
Trigger: CCTTCCCAAGCCGAGCCGGCACAATACAGAATTCAG...AGTGTGCCATGATGTGAGTGGACCTGGCTGGAATCTTCGGAGAGCGACTGAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp CATGCCACCATAAATCACATGACAGCCTGGATCTCTTGGGGACCCCCTCGGCAGTGTCTTCAGAATTGGTaGTGTCCGATCGGCCCACAA +
Preference number: 4 (lower is better)
Translates to: HATINHMTAWISWGPPRQCLQNW*CPIGPQ
Trigger: TTGTGGGCCGATCGGACAGCACCAATTCTGAAGACA...CTGCCGAGGGGGTCCCCAAGAGATCCAGGCTGTCATGTGATTTATGGTGGCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp CATGCCACCATAAATCACATGACAGCCTGGATCTCTTGGGGACCCCCTCGGCAGCTGGGAATTATCACCTaGTCGTTCCATGGCCAACAG +
Preference number: 4 (lower is better)
Translates to: HATINHMTAWISWGPPRQLGIIT*SFHGQQ
Trigger: CTGTTGGCCATGGAACGAGCAGGTGATAATTCCCAG...CTGCCGAGGGGGTCCCCAAGAGATCCAGGCTGTCATGTGATTTATGGTGGCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp TGTAGCTACCACCACTGCTTCCATTCACTTATTGGAACACCAAGGCATGGCCCCGAATCTCACTTCCTCTaGTGGGGCCTCGGTGCACAG +
Preference number: 4 (lower is better)
Translates to: CSYHHCFHSLIGTPRHGPESHFL*WGLGAQ
Trigger: CTGTGCACCGAGGCCCCAGCAGAGGAAGTGAGATTC...GGGGCCATGCCTTGGTGTTCCAATAAGTGAATGGAAGCAGTGGTGGTAGCTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp GCCTCTGACACCAACCTCCCTAAGTACTTCCTCTGCCCTCCATCAGCATTTGAAGAATCTCACTTCCTCTaGTGGGGCCTCGGTGCACAG +
Preference number: 4 (lower is better)
Translates to: ASDTNLPKYFLCPPSAFEESHFL*WGLGAQ
Trigger: CTGTGCACCGAGGCCCCAGCAGAGGAAGTGAGATTC...TTCAAATGCTGATGGAGGGCAGAGGAAGTACTTAGGGAGGTTGGTGTCAGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp GCTTCACATCTGTCTGCTACCTCTGTGCCCGACTTCCACTGCACTGCTCACTGCACTGGGAACGGGAGATaGAGACACTGGGTTTTGCAT +
Preference number: 4 (lower is better)
Translates to: ASHLSATSVPDFHCTAHCTGNGR*RHWVLH
Trigger: ATGCAAAACCCAGTGTCTGCATCTCCCGTTCCCAGT...GCAGTGAGCAGTGCAGTGGAAGTCGGGCACAGAGGTAGCAGACAGATGTGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp CATGCCACCATAAATCACATGACAGCCTGGATCTCTTGGGGACCCCCTCGGCAGACTGGGAACGGGAGATaGAGACACTGGGTTTTGCAT +
Preference number: 4 (lower is better)
Translates to: HATINHMTAWISWGPPRQTGNGR*RHWVLH
Trigger: ATGCAAAACCCAGTGTCTGCATCTCCCGTTCCCAGT...CTGCCGAGGGGGTCCCCAAGAGATCCAGGCTGTCATGTGATTTATGGTGGCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp GTATTTCCCCACTTGCTACATGGCCTTCACCACTGCTTCACATCTGTCTGCTACGAAGGCTCTGAGGACTaGCGCACGTCTGTCCACTCC +
Preference number: 4 (lower is better)
Translates to: VFPHLLHGLHHCFTSVCYEGSED*RTSVHS
Trigger: GGAGTGGACAGACGTGCGGCAGTCCTCAGAGCCTTC...GTAGCAGACAGATGTGAAGCAGTGGTGAAGGCCATGTAGCAAGTGGGGAAATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp TGTATTTCCCCACTTGCTACATGGCCTTCACCACTGCTTCACATCTGTCTGCTACAGCTCTGGAGATGCTaGCTCCTGGGCTCTGCGGTG +
Preference number: 4 (lower is better)
Translates to: CISPLATWPSPLLHICLLQLWRC*LLGSAV
Trigger: CACCGCAGAGCCCAGGAGGCAGCATCTCCAGAGCTG...TAGCAGACAGATGTGAAGCAGTGGTGAAGGCCATGTAGCAAGTGGGGAAATACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp CTGTCCCATCCTAGGAACGGTCCTCATGTCACACCACCATGCACACCACTCTTGAAGCCTTCCCCTGTATaGTGCTTTCAAGGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: LSHPRNGPHVTPPCTPLLKPSPV*CFQGGA
Trigger: AGCCCCACCTTGAAAGCAGCATACAGGGGAAGGCTT...CAAGAGTGGTGTGCATGGTGGTGTGACATGAGGACCGTTCCTAGGATGGGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp TGCTTTCTCCTTGTCCTGCCTGACCCACTGTCCCATCCTAGGAACGGTCCTCATTTTACCATGTGTTCCTaGCCCATGTGCTTGGTCGCC +
Preference number: 4 (lower is better)
Translates to: CFLLVLPDPLSHPRNGPHFTMCS*PMCLVA
Trigger: GGCGACCAAGCACATGGGGCAGGAACACATGGTAAA...ATGAGGACCGTTCCTAGGATGGGACAGTGGGTCAGGCAGGACAAGGAGAAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp CATGCCACCATAAATCACATGACAGCCTGGATCTCTTGGGGACCCCCTCGGCAGCACTGCACTGCTCACTaGAAAGAAACTCACTTCCCG +
Preference number: 4 (lower is better)
Translates to: HATINHMTAWISWGPPRQHCTAH*KETHFP
Trigger: CGGGAAGTGAGTTTCTTTGCAGTGAGCAGTGCAGTG...CTGCCGAGGGGGTCCCCAAGAGATCCAGGCTGTCATGTGATTTATGGTGGCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp ACCTCAGTCGCTCTCCGAAGATTCCAGCCAGGTCCACTCACATCATGGCACACTGTGCCCGACTTCCACTaGACTGCTCACTGCAAAGAA +
Preference number: 4 (lower is better)
Translates to: TSVALRRFQPGPLTSWHTVPDFH*TAHCKE
Trigger: TTCTTTGCAGTGAGCAGTGCAGTGGAAGTCGGGCAC...AGTGTGCCATGATGTGAGTGGACCTGGCTGGAATCTTCGGAGAGCGACTGAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp TCACTTATTGGAACACCAAGGCATGGCCCCTACACTTCTGAGTGGCTGGACCCACTTTCTGCTCCACCCTaGACCCCCAAGGATTGCGTT +
Preference number: 4 (lower is better)
Translates to: SLIGTPRHGPYTSEWLDPLSAPP*TPKDCV
Trigger: AACGCAATCCTTGGGGGTGCAGGGTGGAGCAGAAAG...TGGGTCCAGCCACTCAGAAGTGTAGGGGCCATGCCTTGGTGTTCCAATAAGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp CTGCTACCTCTGTGCCCGACTTCCACTGCACTGCTCACTGCAAAGAAACTCACTGCTTTCTCCTTGTCCTaGCTGACCCACTGTCCCATC +
Preference number: 4 (lower is better)
Translates to: LLPLCPTSTALLTAKKLTAFSLS*LTHCPI
Trigger: GATGGGACAGTGGGTCAGGCAGGACAAGGAGAAAGC...AGTGAGTTTCTTTGCAGTGAGCAGTGCAGTGGAAGTCGGGCACAGAGGTAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp CATGCCACCATAAATCACATGACAGCCTGGATCTCTTGGGGACCCCCTCGGCAGCTGGTGAACTATGCATaGTCATGGGAGCTGAAAGGG +
Preference number: 4 (lower is better)
Translates to: HATINHMTAWISWGPPRQLVNYA*SWELKG
Trigger: CCCTTTCAGCTCCCATGAGCATGCATAGTTCACCAG...CTGCCGAGGGGGTCCCCAAGAGATCCAGGCTGTCATGTGATTTATGGTGGCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp GCTTCACATCTGTCTGCTACCTCTGTGCCCGACTTCCACTGCACTGCTCACTGCGTGGCTGGACCCATATaGTCAAAGGCCTTTTGTTCC +
Preference number: 4 (lower is better)
Translates to: ASHLSATSVPDFHCTAHCVAGPI*SKAFCS
Trigger: GGAACAAAAGGCCTTTGAGCATATGGGTCCAGCCAC...GCAGTGAGCAGTGCAGTGGAAGTCGGGCACAGAGGTAGCAGACAGATGTGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp ATGGGGAAGGAAGAACTCTGGAAATGGGATAGGGGTGCTGGGCCGAGATGTCCCCTCTACCCCTACACTTaGACCCGAGGGATTTTGGTA +
Preference number: 4 (lower is better)
Translates to: MGKEELWKWDRGAGPRCPLYPYT*TRGILV
Trigger: TACCAAAATCCCTCGGGTGCAAGTGTAGGGGTAGAG...GGGACATCTCGGCCCAGCACCCCTATCCCATTTCCAGAGTTCTTCCTTCCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp AGAGTGGCCTGTAGCTCCAGAGTTCTGGGGACCCAGACCCCACAGTGTCCTTGTTCCGCAGAGGCTTCTTaGAGTGATCGTTCTTGTAGT +
Preference number: 4 (lower is better)
Translates to: RVACSSRVLGTQTPQCPCSAEAS*SDRSCS
Trigger: ACTACAAGAACGATCACTCCAAGAAGCCTCTGCGGA...ACAAGGACACTGTGGGGTCTGGGTCCCCAGAACTCTGGAGCTACAGGCCACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp TCACTTATTGGAACACCAAGGCATGGCCCCTACACTTCTGAGTGGCTGGACCCATCTCGGAGAAGGTGCTaGCTAGAGCTGCTGAGCTCA +
Preference number: 4 (lower is better)
Translates to: SLIGTPRHGPYTSEWLDPSRRRC*LELLSS
Trigger: TGAGCTCAGCAGCTCTAGCCAGCACCTTCTCCGAGA...TGGGTCCAGCCACTCAGAAGTGTAGGGGCCATGCCTTGGTGTTCCAATAAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp ACCTCAGTCGCTCTCCGAAGATTCCAGCCAGGTCCACTCACATCATGGCACACTAAGGTGGGCTGCATGTaGTTTGACACAGGGGGTTCA +
Preference number: 4 (lower is better)
Translates to: TSVALRRFQPGPLTSWHTKVGCM*FDTGGS
Trigger: TGAACCCCCTGTGTCAAACCACATGCAGCCCACCTT...AGTGTGCCATGATGTGAGTGGACCTGGCTGGAATCTTCGGAGAGCGACTGAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp AGAGTGGCCTGTAGCTCCAGAGTTCTGGGGACCCAGACCCCACAGTGTCCTTGTCAGGGTGGAAGAACCTaGATTCATGGGCACATAGTT +
Preference number: 4 (lower is better)
Translates to: RVACSSRVLGTQTPQCPCQGGRT*IHGHIV
Trigger: AACTATGTGCCCATGAATCCAGGTTCTTCCACCCTG...ACAAGGACACTGTGGGGTCTGGGTCCCCAGAACTCTGGAGCTACAGGCCACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp ACACCAACCTCCCTAAGTACTTCCTCTGCCCTCCATCAGCATTTGAAGTCTCTGGGCCCCTGGGCTCATTaGGATGTAGACGCTCTGGGA +
Preference number: 4 (lower is better)
Translates to: TPTSLSTSSALHQHLKSLGPWAH*DVDALG
Trigger: TCCCAGAGCGTCTACATCCCAATGAGCCCAGGGGCC...CAGAGACTTCAAATGCTGATGGAGGGCAGAGGAAGTACTTAGGGAGGTTGGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp TGTAGCTACCACCACTGCTTCCATTCACTTATTGGAACACCAAGGCATGGCCCCTCTCACTTCCTCTGCTaGGGCCTCGGTGCACAGGAA +
Preference number: 4 (lower is better)
Translates to: CSYHHCFHSLIGTPRHGPSHFLC*GLGAQE
Trigger: TTCCTGTGCACCGAGGCCCCAGCAGAGGAAGTGAGA...GGGGCCATGCCTTGGTGTTCCAATAAGTGAATGGAAGCAGTGGTGGTAGCTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp AGAGTGGCCTGTAGCTCCAGAGTTCTGGGGACCCAGACCCCACAGTGTCCTTGTGGGAGATGCAGACACTaGGTTTTGCATAGGGACATA +
Preference number: 4 (lower is better)
Translates to: RVACSSRVLGTQTPQCPCGRCRH*VLHRDI
Trigger: TATGTCCCTATGCAAAACCCAGTGTCTGCATCTCCC...ACAAGGACACTGTGGGGTCTGGGTCCCCAGAACTCTGGAGCTACAGGCCACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp TCACTTATTGGAACACCAAGGCATGGCCCCTACACTTCTGAGTGGCTGGACCCACCTCTCATCACAGCTTaGCACCCTTGGAAGGCTCTG +
Preference number: 4 (lower is better)
Translates to: SLIGTPRHGPYTSEWLDPPLITA*HPWKAL
Trigger: CAGAGCCTTCCAAGGGTGCCAAGCTGTGATGAGAGG...TGGGTCCAGCCACTCAGAAGTGTAGGGGCCATGCCTTGGTGTTCCAATAAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp TTCTGGGGACCCAGACCCCACAGTGTCCTTGTCATCTCCACCACCCGAGCTCCAAGGTGGGTGGAGGCATaGCCATTACTGATAAAAATC +
Preference number: 4 (lower is better)
Translates to: FWGPRPHSVLVISTTRAPRWVEA*PLLIKI
Trigger: GATTTTTATCAGTAATGGCCATGCCTCCACCCACCT...TGGAGCTCGGGTGGTGGAGATGACAAGGACACTGTGGGGTCTGGGTCCCCAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp ATGGGGAAGGAAGAACTCTGGAAATGGGATAGGGGTGCTGGGCCGAGATGTCCCCTTGCTGCTCTAGGTTaGCCATCAGTTTTCCCTTCC +
Preference number: 4 (lower is better)
Translates to: MGKEELWKWDRGAGPRCPLAALG*PSVFPS
Trigger: GGAAGGGAAAACTGATGGCCAACCTAGAGCAGCAAG...GGGACATCTCGGCCCAGCACCCCTATCCCATTTCCAGAGTTCTTCCTTCCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp TGTAGCTACCACCACTGCTTCCATTCACTTATTGGAACACCAAGGCATGGCCCCCCCTTGGGCCTAGAGTaGCCTGTAGCTCCAGAGTTC +
Preference number: 4 (lower is better)
Translates to: CSYHHCFHSLIGTPRHGPPLGLE*PVAPEF
Trigger: GAACTCTGGAGCTACAGGCCACTCTAGGCCCAAGGG...GGGGCCATGCCTTGGTGTTCCAATAAGTGAATGGAAGCAGTGGTGGTAGCTACA
54% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp CGAGCTCCAAGCCCTGCTCCTTGCTGCTCTAGGTTGGCCATCAGTTTTCCCTTCCAGCCATGCCTGATGTaGTCCTCTAGGCATCATTCT +
Preference number: 4 (lower is better)
Translates to: RAPSPAPCCSRLAISFPFQPCLM*SSRHHS
Trigger: AGAATGATGCCTAGAGGACCACATCAGGCATGGCTG...GAAGGGAAAACTGATGGCCAACCTAGAGCAGCAAGGAGCAGGGCTTGGAGCTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp GCCTCTGACACCAACCTCCCTAAGTACTTCCTCTGCCCTCCATCAGCATTTGAAGAGGCTGCAATAGTCTaGGCCCACTTGTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: ASDTNLPKYFLCPPSAFEEAAIV*AHLWLL
Trigger: CAGCAGCCACAAGTGGGCCCAGACTATTGCAGCCTC...TTCAAATGCTGATGGAGGGCAGAGGAAGTACTTAGGGAGGTTGGTGTCAGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp GCTTCACATCTGTCTGCTACCTCTGTGCCCGACTTCCACTGCACTGCTCACTGCGGTCCACTCACATCATaGCACACTCAGAACATGCTC +
Preference number: 4 (lower is better)
Translates to: ASHLSATSVPDFHCTAHCGPLTS*HTQNML
Trigger: GAGCATGTTCTGAGTGTGCCATGATGTGAGTGGACC...GCAGTGAGCAGTGCAGTGGAAGTCGGGCACAGAGGTAGCAGACAGATGTGAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp CATGCCACCATAAATCACATGACAGCCTGGATCTCTTGGGGACCCCCTCGGCAGGGGAAGGAAGAACTCTaGAAATGGGATAGGGGTGCT +
Preference number: 4 (lower is better)
Translates to: HATINHMTAWISWGPPRQGKEEL*KWDRGA
Trigger: AGCACCCCTATCCCATTTCCAGAGTTCTTCCTTCCC...CTGCCGAGGGGGTCCCCAAGAGATCCAGGCTGTCATGTGATTTATGGTGGCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp CGAGCTCCAAGCCCTGCTCCTTGCTGCTCTAGGTTGGCCATCAGTTTTCCCTTCCTCCTGAGACCAGTCTaGCTTCCCCTGCATTTTATG +
Preference number: 4 (lower is better)
Translates to: RAPSPAPCCSRLAISFPFLLRPV*LPLHFM
Trigger: CATAAAATGCAGGGGAAGCCAGACTGGTCTCAGGAG...GAAGGGAAAACTGATGGCCAACCTAGAGCAGCAAGGAGCAGGGCTTGGAGCTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR CAA 72 bp CCCCAACTCCCAGGCCCTTTGGATGTATTTCCCCACTaGCTACATGGCCTTCACCACTGCTTCACATCTGTC +
Preference number: 4 (lower is better)
Translates to: PQLPGPLDVFPH*LHGLHHCFTSV
Trigger: GACAGATGTGAAGCAGTGGTGAAGGCCATGTAGCAAGTGGGGAAATACATCCAAAGGGCCTGGGAGTTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR TCA 90 bp ACCTCAGTCGCTCTCCGAAGATTCCAGCCAGGTCCACTCACATCATGGCACACTCGTAGGTACTGTCTCTaGATTCTGTATTGTGCCGGC +
Preference number: 4 (lower is better)
Translates to: TSVALRRFQPGPLTSWHTRRYCL*ILYCAG
Trigger: GCCGGCACAATACAGAATTCAGAGACAGTACCTACG...AGTGTGCCATGATGTGAGTGGACCTGGCTGGAATCTTCGGAGAGCGACTGAGGT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR TCA 90 bp TGCTTTCTCCTTGTCCTGCCTGACCCACTGTCCCATCCTAGGAACGGTCCTCATTGTTGCTGGGCGTCTTaGAGGTGTACACATCCTCAT +
Preference number: 4 (lower is better)
Translates to: CFLLVLPDPLSHPRNGPHCCWAS*RCTHPH
Trigger: ATGAGGATGTGTACACCTTCAAGACGCCCAGCAACA...ATGAGGACCGTTCCTAGGATGGGACAGTGGGTCAGGCAGGACAAGGAGAAAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR TCA 90 bp TGTATTTCCCCACTTGCTACATGGCCTTCACCACTGCTTCACATCTGTCTGCTAATTGGCGGTCTCTGCTaGGGACTGCCCCATCGAGGT +
Preference number: 4 (lower is better)
Translates to: CISPLATWPSPLLHICLLIGGLC*GLPHRG
Trigger: ACCTCGATGGGGCAGTCCTCAGCAGAGACCGCCAAT...TAGCAGACAGATGTGAAGCAGTGGTGAAGGCCATGTAGCAAGTGGGGAAATACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR TCA 90 bp ACACCTCAGTCGCTCTCCGAAGATTCCAGCCAGGTCCACTCACATCATGGCACAAAGTGCTTTGAAGGCTaGGACTGGCAGAGTAGAGAG +
Preference number: 4 (lower is better)
Translates to: TPQSLSEDSSQVHSHHGTKCFEG*DWQSRE
Trigger: CTCTCTACTCTGCCAGTCTCAGCCTTCAAAGCACTT...TGTGCCATGATGTGAGTGGACCTGGCTGGAATCTTCGGAGAGCGACTGAGGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR TCA 90 bp GCCTCTGACACCAACCTCCCTAAGTACTTCCTCTGCCCTCCATCAGCATTTGAAGACTCCCTGGGTTGGTaGGACTTGTCTTCTGGGACT +
Preference number: 4 (lower is better)
Translates to: ASDTNLPKYFLCPPSAFEDSLGW*DLSSGT
Trigger: AGTCCCAGAAGACAAGTCTCACCAACCCAGGGAGTC...TTCAAATGCTGATGGAGGGCAGAGGAAGTACTTAGGGAGGTTGGTGTCAGAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR TCA 90 bp AGCTTTCCCTCTTCATCTGGGCATCTAAGTCCTTTACCCCTCAAGACCACTGCTCGCCCCAGGGTAGAATaGAACGTCTGGTCTGTCCTG +
Preference number: 4 (lower is better)
Translates to: SFPSSSGHLSPLPLKTTARPRVE*NVWSVL
Trigger: CAGGACAGACCAGACGTTTCATTCTACCCTGGGGCG...AGCAGTGGTCTTGAGGGGTAAAGGACTTAGATGCCCAGATGAAGAGGGAAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR TCA 90 bp CTGCTACCTCTGTGCCCGACTTCCACTGCACTGCTCACTGCAAAGAAACTCACTGTAGTTTGGGGCCTGTaGGCCAGAGCTTTGCTTTCA +
Preference number: 4 (lower is better)
Translates to: LLPLCPTSTALLTAKKLTVVWGL*ARALLS
Trigger: TGAAAGCAAAGCTCTGGCTCACAGGCCCCAAACTAC...AGTGAGTTTCTTTGCAGTGAGCAGTGCAGTGGAAGTCGGGCACAGAGGTAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp ACACCAACCTCCCTAAGTACTTCCTCTGCCCTCCATCAGCATTTGAAGTCTCTGGAGATACTCCTGAGGTaGGCTGGTGGACAAGGTGGG +
Preference number: 4 (lower is better)
Translates to: TPTSLSTSSALHQHLKSLEILLR*AGGQGG
Trigger: CCCACCTTGTCCACCAGCGCACCTCAGGAGTATCTC...CAGAGACTTCAAATGCTGATGGAGGGCAGAGGAAGTACTTAGGGAGGTTGGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp TGTAGCTACCACCACTGCTTCCATTCACTTATTGGAACACCAAGGCATGGCCCCGAAAAGAGGCTCTGGTaGCCTGAGAGAAGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: CSYHHCFHSLIGTPRHGPEKRLW*PERSWH
Trigger: GTGCCAGCTTCTCTCAGGGCACCAGAGCCTCTTTTC...GGGGCCATGCCTTGGTGTTCCAATAAGTGAATGGAAGCAGTGGTGGTAGCTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp ACACCAACCTCCCTAAGTACTTCCTCTGCCCTCCATCAGCATTTGAAGTCTCTGCTGCTGGGGCCTCGGTaGACAGGAAGGGTTGTTGAT +
Preference number: 4 (lower is better)
Translates to: TPTSLSTSSALHQHLKSLLLGPR*TGRVVD
Trigger: ATCAACAACCCTTCCTGTGCACCGAGGCCCCAGCAG...CAGAGACTTCAAATGCTGATGGAGGGCAGAGGAAGTACTTAGGGAGGTTGGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp CGAGCTCCAAGCCCTGCTCCTTGCTGCTCTAGGTTGGCCATCAGTTTTCCCTTCTTATCCACTTTGGTTTaGTGGTCCTTGACTCCCTGG +
Preference number: 4 (lower is better)
Translates to: RAPSPAPCCSRLAISFPFLSTLV*WSLTPW
Trigger: CCAGGGAGTCAAGGACCAGCAAACCAAAGTGGATAA...GAAGGGAAAACTGATGGCCAACCTAGAGCAGCAAGGAGCAGGGCTTGGAGCTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp GTATTTCCCCACTTGCTACATGGCCTTCACCACTGCTTCACATCTGTCTGCTACCCAAGCCCTGCTCCTTaGTGCTCTAGGTTGGCCATC +
Preference number: 4 (lower is better)
Translates to: VFPHLLHGLHHCFTSVCYPSPAP*CSRLAI
Trigger: GATGGCCAACCTAGAGCAGCAAGGAGCAGGGCTTGG...GTAGCAGACAGATGTGAAGCAGTGGTGAAGGCCATGTAGCAAGTGGGGAAATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp AGCTTTCCCTCTTCATCTGGGCATCTAAGTCCTTTACCCCTCAAGACCACTGCTCCTTCCCCTGTATGCTaGTTTCAAGGTGGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: SFPSSSGHLSPLPLKTTAPSPVC*FQGGAG
Trigger: GCCAGCCCCACCTTGAAAGCAGCATACAGGGGAAGG...AGCAGTGGTCTTGAGGGGTAAAGGACTTAGATGCCCAGATGAAGAGGGAAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp ACACCAACCTCCCTAAGTACTTCCTCTGCCCTCCATCAGCATTTGAAGTCTCTGCCTTCCCCTGTATGCTaGTTTCAAGGTGGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: TPTSLSTSSALHQHLKSLPSPVC*FQGGAG
Trigger: GCCAGCCCCACCTTGAAAGCAGCATACAGGGGAAGG...CAGAGACTTCAAATGCTGATGGAGGGCAGAGGAAGTACTTAGGGAGGTTGGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp GTATTTCCCCACTTGCTACATGGCCTTCACCACTGCTTCACATCTGTCTGCTACTGTTCCTGCCCCATGTaGTTGGTCGCCCAGCTTGGT +
Preference number: 4 (lower is better)
Translates to: VFPHLLHGLHHCFTSVCYCSCPM*LVAQLG
Trigger: ACCAAGCTGGGCGACCAAGCACATGGGGCAGGAACA...GTAGCAGACAGATGTGAAGCAGTGGTGAAGGCCATGTAGCAAGTGGGGAAATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp TGTAGCTACCACCACTGCTTCCATTCACTTATTGGAACACCAAGGCATGGCCCCTGTCTGCTACCTCTGTaGCCGACTTCCACTGCACTG +
Preference number: 4 (lower is better)
Translates to: CSYHHCFHSLIGTPRHGPCLLPL*PTSTAL
Trigger: CAGTGCAGTGGAAGTCGGGCACAGAGGTAGCAGACA...GGGGCCATGCCTTGGTGTTCCAATAAGTGAATGGAAGCAGTGGTGGTAGCTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp CTGTCCCATCCTAGGAACGGTCCTCATGTCACACCACCATGCACACCACTCTTGCATGGCCTTCACCACTaGTTCACATCTGTCTGCTAC +
Preference number: 4 (lower is better)
Translates to: LSHPRNGPHVTPPCTPLLHGLHH*FTSVCY
Trigger: GTAGCAGACAGATGTGAAGCAGTGGTGAAGGCCATG...CAAGAGTGGTGTGCATGGTGGTGTGACATGAGGACCGTTCCTAGGATGGGACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp TTTGTCCTTCATCTTCTGCCTCTGCACCCCACAGCAGCTGTCCTGCCATGGCCTTGGTCTGGTGAACTATaGATGCTCATGGGAGCTGAA +
Preference number: 4 (lower is better)
Translates to: FVLHLLPLHPTAAVLPWPWSGEL*MLMGAE
Trigger: TTCAGCTCCCATGAGCATGCATAGTTCACCAGACCA...AGGCCATGGCAGGACAGCTGCTGTGGGGTGCAGAGGCAGAAGATGAAGGACAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp ATGGGGAAGGAAGAACTCTGGAAATGGGATAGGGGTGCTGGGCCGAGATGTCCCGGCACACTCAGAACATaGTCACATGTTTATGGGAGG +
Preference number: 4 (lower is better)
Translates to: MGKEELWKWDRGAGPRCPGTLRT*SHVYGR
Trigger: CCTCCCATAAACATGTGAGCATGTTCTGAGTGTGCC...GGGACATCTCGGCCCAGCACCCCTATCCCATTTCCAGAGTTCTTCCTTCCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp GCTTCACATCTGTCTGCTACCTCTGTGCCCGACTTCCACTGCACTGCTCACTGCCAGTGTCCATTGCCCTaGGCAAGTTTTTGTACAGCT +
Preference number: 4 (lower is better)
Translates to: ASHLSATSVPDFHCTAHCQCPLP*ASFCTA
Trigger: AGCTGTACAAAAACTTGCCCAGGGCAATGGACACTG...GCAGTGAGCAGTGCAGTGGAAGTCGGGCACAGAGGTAGCAGACAGATGTGAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp CATGCCACCATAAATCACATGACAGCCTGGATCTCTTGGGGACCCCCTCGGCAGGAGTGGCCACTGTCATaGCATTGTGGTTTTTGTCCA +
Preference number: 4 (lower is better)
Translates to: HATINHMTAWISWGPPRQEWPLS*HCGFCP
Trigger: TGGACAAAAACCACAATGCCATGACAGTGGCCACTC...CTGCCGAGGGGGTCCCCAAGAGATCCAGGCTGTCATGTGATTTATGGTGGCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp TGTAGCTACCACCACTGCTTCCATTCACTTATTGGAACACCAAGGCATGGCCCCTGCGTCTGGGGATGGTaGCAGCGACAGATCTGCTAT +
Preference number: 4 (lower is better)
Translates to: CSYHHCFHSLIGTPRHGPCVWGW*QRQICY
Trigger: ATAGCAGATCTGTCGCTGCCACCATCCCCAGACGCA...GGGGCCATGCCTTGGTGTTCCAATAAGTGAATGGAAGCAGTGGTGGTAGCTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp GCCTCTGACACCAACCTCCCTAAGTACTTCCTCTGCCCTCCATCAGCATTTGAATGCGTCTGGGGATGGTaGCAGCGACAGATCTGCTAT +
Preference number: 4 (lower is better)
Translates to: ASDTNLPKYFLCPPSAFECVWGW*QRQICY
Trigger: ATAGCAGATCTGTCGCTGCCACCATCCCCAGACGCA...TTCAAATGCTGATGGAGGGCAGAGGAAGTACTTAGGGAGGTTGGTGTCAGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp AGCTTTCCCTCTTCATCTGGGCATCTAAGTCCTTTACCCCTCAAGACCACTGCTTGTTGCGTCTGGGGATaGTGGCAGCGACAGATCTGC +
Preference number: 4 (lower is better)
Translates to: SFPSSSGHLSPLPLKTTACCVWG*WQRQIC
Trigger: GCAGATCTGTCGCTGCCACCATCCCCAGACGCAACA...AGCAGTGGTCTTGAGGGGTAAAGGACTTAGATGCCCAGATGAAGAGGGAAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp CTGTCCCATCCTAGGAACGGTCCTCATGTCACACCACCATGCACACCACTCTTGAGTTGTCTTCAGAATTaGTGCTGTCCGATCGGCCCA +
Preference number: 4 (lower is better)
Translates to: LSHPRNGPHVTPPCTPLLSCLQN*CCPIGP
Trigger: TGGGCCGATCGGACAGCACCAATTCTGAAGACAACT...CAAGAGTGGTGTGCATGGTGGTGTGACATGAGGACCGTTCCTAGGATGGGACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp TGTAGCTACCACCACTGCTTCCATTCACTTATTGGAACACCAAGGCATGGCCCCCCTCTCATCACAGCTTaGCACCCTTGGAAGGCTCTG +
Preference number: 4 (lower is better)
Translates to: CSYHHCFHSLIGTPRHGPPLITA*HPWKAL
Trigger: CAGAGCCTTCCAAGGGTGCCAAGCTGTGATGAGAGG...GGGGCCATGCCTTGGTGTTCCAATAAGTGAATGGAAGCAGTGGTGGTAGCTACA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp TGTAGCTACCACCACTGCTTCCATTCACTTATTGGAACACCAAGGCATGGCCCCGATAAAAATCACAGCTaGGCCCCGAGTGGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: CSYHHCFHSLIGTPRHGPDKNHS*APSGQR
Trigger: CCTCTGCCCACTCGGGGCCCAGCTGTGATTTTTATC...GGGGCCATGCCTTGGTGTTCCAATAAGTGAATGGAAGCAGTGGTGGTAGCTACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp AGAGTGGCCTGTAGCTCCAGAGTTCTGGGGACCCAGACCCCACAGTGTCCTTGTAGGTGGGTGGAGGCATaGCCATTACTGATAAAAATC +
Preference number: 4 (lower is better)
Translates to: RVACSSRVLGTQTPQCPCRWVEA*PLLIKI
Trigger: GATTTTTATCAGTAATGGCCATGCCTCCACCCACCT...ACAAGGACACTGTGGGGTCTGGGTCCCCAGAACTCTGGAGCTACAGGCCACTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp ACACCAACCTCCCTAAGTACTTCCTCTGCCCTCCATCAGCATTTGAAGTCTCTGGTGAGGTGTGGAATCTaGCTCAGAGCCCCAGCCCTT +
Preference number: 4 (lower is better)
Translates to: TPTSLSTSSALHQHLKSLVRCGI*LRAPAL
Trigger: AAGGGCTGGGGCTCTGAGCCAGATTCCACACCTCAC...CAGAGACTTCAAATGCTGATGGAGGGCAGAGGAAGTACTTAGGGAGGTTGGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp ACCTCAGTCGCTCTCCGAAGATTCCAGCCAGGTCCACTCACATCATGGCACACTTGGTCCTTGACTCCCTaGGTTGGTGAGACTTGTCTT +
Preference number: 4 (lower is better)
Translates to: TSVALRRFQPGPLTSWHTWSLTP*VGETCL
Trigger: AAGACAAGTCTCACCAACCCAGGGAGTCAAGGACCA...AGTGTGCCATGATGTGAGTGGACCTGGCTGGAATCTTCGGAGAGCGACTGAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp CTGCTACCTCTGTGCCCGACTTCCACTGCACTGCTCACTGCAAAGAAACTCACTTCCCCACTTGCTACATaGCCTTCACCACTGCTTCAC +
Preference number: 4 (lower is better)
Translates to: LLPLCPTSTALLTAKKLTSPLAT*PSPLLH
Trigger: GTGAAGCAGTGGTGAAGGCCATGTAGCAAGTGGGGA...AGTGAGTTTCTTTGCAGTGAGCAGTGCAGTGGAAGTCGGGCACAGAGGTAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp TGCTTTCTCCTTGTCCTGCCTGACCCACTGTCCCATCCTAGGAACGGTCCTCATCAGCCATGCCTGATGTaGTCCTCTAGGCATCATTCT +
Preference number: 4 (lower is better)
Translates to: CFLLVLPDPLSHPRNGPHQPCLM*SSRHHS
Trigger: AGAATGATGCCTAGAGGACCACATCAGGCATGGCTG...ATGAGGACCGTTCCTAGGATGGGACAGTGGGTCAGGCAGGACAAGGAGAAAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp CGAGCTCCAAGCCCTGCTCCTTGCTGCTCTAGGTTGGCCATCAGTTTTCCCTTCATGGGACTTAGAGAATaGCTAGGCCATTGGTCTGGT +
Preference number: 4 (lower is better)
Translates to: RAPSPAPCCSRLAISFPFMGLRE*LGHWSG
Trigger: ACCAGACCAATGGCCTAGCCATTCTCTAAGTCCCAT...GAAGGGAAAACTGATGGCCAACCTAGAGCAGCAAGGAGCAGGGCTTGGAGCTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp CTGTCCCATCCTAGGAACGGTCCTCATGTCACACCACCATGCACACCACTCTTGCCCTACACTTCTGAGTaGCTGGACCCATATGCTCAA +
Preference number: 4 (lower is better)
Translates to: LSHPRNGPHVTPPCTPLLPYTSE*LDPYAQ
Trigger: TTGAGCATATGGGTCCAGCCACTCAGAAGTGTAGGG...CAAGAGTGGTGTGCATGGTGGTGTGACATGAGGACCGTTCCTAGGATGGGACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp GCTTCACATCTGTCTGCTACCTCTGTGCCCGACTTCCACTGCACTGCTCACTGCTGGAAGGAAGCCTCCTaGGAGATTCGATTTGAACAC +
Preference number: 4 (lower is better)
Translates to: ASHLSATSVPDFHCTAHCWKEAS*EIRFEH
Trigger: GTGTTCAAATCGAATCTCCCAGGAGGCTTCCTTCCA...GCAGTGAGCAGTGCAGTGGAAGTCGGGCACAGAGGTAGCAGACAGATGTGAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR CAA 72 bp TTCAGATCCCCCACCCTTAGTTTAAGAGAAGGAACCTaGGGTGATGCCCTACACCCCGTCCCTGCTAATCTG +
Preference number: 4 (lower is better)
Translates to: FRSPTLSLREGT*GDALHPVPANL
Trigger: CAGATTAGCAGGGACGGGGTGTAGGGCATCACCCAAGGTTCCTTCTCTTAAACTAAGGGTGGGGGATCTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR CAA 72 bp GTGGTAGCTGTCCCCATCAAACATGGCAGGAAGTCATaGTTTGGGAGGAAGAAGTTCTGTTCGCCCCAGGGT +
Preference number: 4 (lower is better)
Translates to: VVAVPIKHGRKS*FGRKKFCSPQG
Trigger: ACCCTGGGGCGAACAGAACTTCTTCCTCCCAAACAATGACTTCCTGCCATGTTTGATGGGGACAGCTACCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR TCA 90 bp TTCTGGGGACCCAGACCCCACAGTGTCCTTGTCATCTCCACCACCCGAGCTCCATGCGTTCACTGGTCTTaGTGTCAAACACAAAACTAT +
Preference number: 4 (lower is better)
Translates to: FWGPRPHSVLVISTTRAPCVHWS*CQTQNY
Trigger: ATAGTTTTGTGTTTGACATCAAGACCAGTGAACGCA...TGGAGCTCGGGTGGTGGAGATGACAAGGACACTGTGGGGTCTGGGTCCCCAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR TCA 90 bp GCCTCTGACACCAACCTCCCTAAGTACTTCCTCTGCCCTCCATCAGCATTTGAATCTCCTCAGCCTGATTaGAGCCACAGATCTGGCAGA +
Preference number: 4 (lower is better)
Translates to: ASDTNLPKYFLCPPSAFESPQPD*SHRSGR
Trigger: TCTGCCAGATCTGTGGCTTCAATCAGGCTGAGGAGA...TTCAAATGCTGATGGAGGGCAGAGGAAGTACTTAGGGAGGTTGGTGTCAGAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR TCA 90 bp AGCTTTCCCTCTTCATCTGGGCATCTAAGTCCTTTACCCCTCAAGACCACTGCTCTTGTCTTCTGGGACTaGAGGAGAGGTAGCCCAGTG +
Preference number: 4 (lower is better)
Translates to: SFPSSSGHLSPLPLKTTALVFWD*RRGSPV
Trigger: CACTGGGCTACCTCTCCTTCAGTCCCAGAAGACAAG...AGCAGTGGTCTTGAGGGGTAAAGGACTTAGATGCCCAGATGAAGAGGGAAAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp TGCTTTCTCCTTGTCCTGCCTGACCCACTGTCCCATCCTAGGAACGGTCCTCATGTTAAAGGTCAGGCCTaGATCTACCTGCTCACAGAA +
Preference number: 4 (lower is better)
Translates to: CFLLVLPDPLSHPRNGPHVKGQA*IYLLTE
Trigger: TTCTGTGAGCAGGTAGATGCAGGCCTGACCTTTAAC...ATGAGGACCGTTCCTAGGATGGGACAGTGGGTCAGGCAGGACAAGGAGAAAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp ACCTCAGTCGCTCTCCGAAGATTCCAGCCAGGTCCACTCACATCATGGCACACTGTTAAAGGTCAGGCCTaGATCTACCTGCTCACAGAA +
Preference number: 4 (lower is better)
Translates to: TSVALRRFQPGPLTSWHTVKGQA*IYLLTE
Trigger: TTCTGTGAGCAGGTAGATGCAGGCCTGACCTTTAAC...AGTGTGCCATGATGTGAGTGGACCTGGCTGGAATCTTCGGAGAGCGACTGAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp TGTAGCTACCACCACTGCTTCCATTCACTTATTGGAACACCAAGGCATGGCCCCCTGAATTCTGTATTGTaGCGGCTCGGCTTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: CSYHHCFHSLIGTPRHGPLNSVL*RLGLGR
Trigger: CCTTCCCAAGCCGAGCCGGCACAATACAGAATTCAG...GGGGCCATGCCTTGGTGTTCCAATAAGTGAATGGAAGCAGTGGTGGTAGCTACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp CTGCTACCTCTGTGCCCGACTTCCACTGCACTGCTCACTGCAAAGAAACTCACTTGTCTTCAGAATTGGTaGTGTCCGATCGGCCCACAA +
Preference number: 4 (lower is better)
Translates to: LLPLCPTSTALLTAKKLTCLQNW*CPIGPQ
Trigger: TTGTGGGCCGATCGGACAGCACCAATTCTGAAGACA...AGTGAGTTTCTTTGCAGTGAGCAGTGCAGTGGAAGTCGGGCACAGAGGTAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp ACACCTCAGTCGCTCTCCGAAGATTCCAGCCAGGTCCACTCACATCATGGCACATTATCCACTTTGGTTTaGTGGTCCTTGACTCCCTGG +
Preference number: 4 (lower is better)
Translates to: TPQSLSEDSSQVHSHHGTLSTLV*WSLTPW
Trigger: CCAGGGAGTCAAGGACCAGCAAACCAAAGTGGATAA...TGTGCCATGATGTGAGTGGACCTGGCTGGAATCTTCGGAGAGCGACTGAGGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp CGAGCTCCAAGCCCTGCTCCTTGCTGCTCTAGGTTGGCCATCAGTTTTCCCTTCATGTATTTCCCCACTTaGTACATGGCCTTCACCACT +
Preference number: 4 (lower is better)
Translates to: RAPSPAPCCSRLAISFPFMYFPT*YMAFTT
Trigger: AGTGGTGAAGGCCATGTAGCAAGTGGGGAAATACAT...GAAGGGAAAACTGATGGCCAACCTAGAGCAGCAAGGAGCAGGGCTTGGAGCTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp TGTAGCTACCACCACTGCTTCCATTCACTTATTGGAACACCAAGGCATGGCCCCCATGCACACCACTCTTaGACGTGTCCCTCCTTCACT +
Preference number: 4 (lower is better)
Translates to: CSYHHCFHSLIGTPRHGPHAHHS*TCPSFT
Trigger: AGTGAAGGAGGGACACGTGCAAGAGTGGTGTGCATG...GGGGCCATGCCTTGGTGTTCCAATAAGTGAATGGAAGCAGTGGTGGTAGCTACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp GCCTCTGACACCAACCTCCCTAAGTACTTCCTCTGCCCTCCATCAGCATTTGAACATGCACACCACTCTTaGACGTGTCCCTCCTTCACT +
Preference number: 4 (lower is better)
Translates to: ASDTNLPKYFLCPPSAFEHAHHS*TCPSFT
Trigger: AGTGAAGGAGGGACACGTGCAAGAGTGGTGTGCATG...TTCAAATGCTGATGGAGGGCAGAGGAAGTACTTAGGGAGGTTGGTGTCAGAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp CTGTCCCATCCTAGGAACGGTCCTCATGTCACACCACCATGCACACCACTCTTGTGGTCTGGTGAACTATaGATGCTCATGGGAGCTGAA +
Preference number: 4 (lower is better)
Translates to: LSHPRNGPHVTPPCTPLLWSGEL*MLMGAE
Trigger: TTCAGCTCCCATGAGCATGCATAGTTCACCAGACCA...CAAGAGTGGTGTGCATGGTGGTGTGACATGAGGACCGTTCCTAGGATGGGACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp TCACTTATTGGAACACCAAGGCATGGCCCCTACACTTCTGAGTGGCTGGACCCAGTGGCTGGACCCATATaGTCAAAGGCCTTTTGTTCC +
Preference number: 4 (lower is better)
Translates to: SLIGTPRHGPYTSEWLDPVAGPI*SKAFCS
Trigger: GGAACAAAAGGCCTTTGAGCATATGGGTCCAGCCAC...TGGGTCCAGCCACTCAGAAGTGTAGGGGCCATGCCTTGGTGTTCCAATAAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp CCCTGCTTTCTCCTTGTCCTGCCTGACCCACTGTCCCATCCTAGGAACGGTCCTTGTAGCTACCACCACTaGTTCCATTCACTTATTGGA +
Preference number: 4 (lower is better)
Translates to: PCFLLVLPDPLSHPRNGPCSYHH*FHSLIG
Trigger: TCCAATAAGTGAATGGAAGCAGTGGTGGTAGCTACA...AGGACCGTTCCTAGGATGGGACAGTGGGTCAGGCAGGACAAGGAGAAAGCAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp TGCTTTCTCCTTGTCCTGCCTGACCCACTGTCCCATCCTAGGAACGGTCCTCATATGTTTATGGGAGGCTaGAATAGTCTGGGCCCACTT +
Preference number: 4 (lower is better)
Translates to: CFLLVLPDPLSHPRNGPHMFMGG*NSLGPL
Trigger: AAGTGGGCCCAGACTATTGCAGCCTCCCATAAACAT...ATGAGGACCGTTCCTAGGATGGGACAGTGGGTCAGGCAGGACAAGGAGAAAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp CTGTCCCATCCTAGGAACGGTCCTCATGTCACACCACCATGCACACCACTCTTGGGCACACTCAGAACATaGTCACATGTTTATGGGAGG +
Preference number: 4 (lower is better)
Translates to: LSHPRNGPHVTPPCTPLLGTLRT*SHVYGR
Trigger: CCTCCCATAAACATGTGAGCATGTTCTGAGTGTGCC...CAAGAGTGGTGTGCATGGTGGTGTGACATGAGGACCGTTCCTAGGATGGGACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp TGCTTTCTCCTTGTCCTGCCTGACCCACTGTCCCATCCTAGGAACGGTCCTCATATCTGGCAGATGCTCTaGACCCACTTATTCATGTCC +
Preference number: 4 (lower is better)
Translates to: CFLLVLPDPLSHPRNGPHIWQML*THLFMS
Trigger: GGACATGAATAAGTGGGTCCAGAGCATCTGCCAGAT...ATGAGGACCGTTCCTAGGATGGGACAGTGGGTCAGGCAGGACAAGGAGAAAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp ACCTCAGTCGCTCTCCGAAGATTCCAGCCAGGTCCACTCACATCATGGCACACTATCTGGCAGATGCTCTaGACCCACTTATTCATGTCC +
Preference number: 4 (lower is better)
Translates to: TSVALRRFQPGPLTSWHTIWQML*THLFMS
Trigger: GGACATGAATAAGTGGGTCCAGAGCATCTGCCAGAT...AGTGTGCCATGATGTGAGTGGACCTGGCTGGAATCTTCGGAGAGCGACTGAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp GTATTTCCCCACTTGCTACATGGCCTTCACCACTGCTTCACATCTGTCTGCTACCGCTGGTGGACAAGGTaGGCTGCATGTGGTTTGACA +
Preference number: 4 (lower is better)
Translates to: VFPHLLHGLHHCFTSVCYRWWTR*AACGLT
Trigger: TGTCAAACCACATGCAGCCCACCTTGTCCACCAGCG...GTAGCAGACAGATGTGAAGCAGTGGTGAAGGCCATGTAGCAAGTGGGGAAATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp TGCTTTCTCCTTGTCCTGCCTGACCCACTGTCCCATCCTAGGAACGGTCCTCATCAGTGTCCATTGCCCTaGGCAAGTTTTTGTACAGCT +
Preference number: 4 (lower is better)
Translates to: CFLLVLPDPLSHPRNGPHQCPLP*ASFCTA
Trigger: AGCTGTACAAAAACTTGCCCAGGGCAATGGACACTG...ATGAGGACCGTTCCTAGGATGGGACAGTGGGTCAGGCAGGACAAGGAGAAAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp ACACCTCAGTCGCTCTCCGAAGATTCCAGCCAGGTCCACTCACATCATGGCACAGAGTGGCCACTGTCATaGCATTGTGGTTTTTGTCCA +
Preference number: 4 (lower is better)
Translates to: TPQSLSEDSSQVHSHHGTEWPLS*HCGFCP
Trigger: TGGACAAAAACCACAATGCCATGACAGTGGCCACTC...TGTGCCATGATGTGAGTGGACCTGGCTGGAATCTTCGGAGAGCGACTGAGGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp ACACCAACCTCCCTAAGTACTTCCTCTGCCCTCCATCAGCATTTGAAGTCTCTGGACTGTTCGTGCCACTaGGAACGGGAGATGCAGACA +
Preference number: 4 (lower is better)
Translates to: TPTSLSTSSALHQHLKSLDCSCH*EREMQT
Trigger: TGTCTGCATCTCCCGTTCCCAGTGGCACGAACAGTC...CAGAGACTTCAAATGCTGATGGAGGGCAGAGGAAGTACTTAGGGAGGTTGGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp ATGGGGAAGGAAGAACTCTGGAAATGGGATAGGGGTGCTGGGCCGAGATGTCCCCTTTCCCTCTTCATCTaGGCATCTAAGTCCTTTACC +
Preference number: 4 (lower is better)
Translates to: MGKEELWKWDRGAGPRCPLSLFI*ASKSFT
Trigger: GGTAAAGGACTTAGATGCCCAGATGAAGAGGGAAAG...GGGACATCTCGGCCCAGCACCCCTATCCCATTTCCAGAGTTCTTCCTTCCCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp AGCTTTCCCTCTTCATCTGGGCATCTAAGTCCTTTACCCCTCAAGACCACTGCTGCCTCAGCCTCAAAGTaGGTTCCCTGCAGATGTCAG +
Preference number: 4 (lower is better)
Translates to: SFPSSSGHLSPLPLKTTAASASK*VPCRCQ
Trigger: CTGACATCTGCAGGGAACCCACTTTGAGGCTGAGGC...AGCAGTGGTCTTGAGGGGTAAAGGACTTAGATGCCCAGATGAAGAGGGAAAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp CTGCTACCTCTGTGCCCGACTTCCACTGCACTGCTCACTGCAAAGAAACTCACTCTTGCTGCTCTAGGTTaGCCATCAGTTTTCCCTTCC +
Preference number: 4 (lower is better)
Translates to: LLPLCPTSTALLTAKKLTLAALG*PSVFPS
Trigger: GGAAGGGAAAACTGATGGCCAACCTAGAGCAGCAAG...AGTGAGTTTCTTTGCAGTGAGCAGTGCAGTGGAAGTCGGGCACAGAGGTAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp TGTATTTCCCCACTTGCTACATGGCCTTCACCACTGCTTCACATCTGTCTGCTAGTAGCTCCAGAGTTCTaGGGACCCAGACCCCACAGT +
Preference number: 4 (lower is better)
Translates to: CISPLATWPSPLLHICLLVAPEF*GPRPHS
Trigger: ACTGTGGGGTCTGGGTCCCCAGAACTCTGGAGCTAC...TAGCAGACAGATGTGAAGCAGTGGTGAAGGCCATGTAGCAAGTGGGGAAATACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp TGCTTTCTCCTTGTCCTGCCTGACCCACTGTCCCATCCTAGGAACGGTCCTCATGAATGGCTAGGCCATTaGTCTGGTGAACTATGCATG +
Preference number: 4 (lower is better)
Translates to: CFLLVLPDPLSHPRNGPHEWLGH*SGELCM
Trigger: CATGCATAGTTCACCAGACCAATGGCCTAGCCATTC...ATGAGGACCGTTCCTAGGATGGGACAGTGGGTCAGGCAGGACAAGGAGAAAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp ACCTCAGTCGCTCTCCGAAGATTCCAGCCAGGTCCACTCACATCATGGCACACTTGGAAGGAAGCCTCCTaGGAGATTCGATTTGAACAC +
Preference number: 4 (lower is better)
Translates to: TSVALRRFQPGPLTSWHTWKEAS*EIRFEH
Trigger: GTGTTCAAATCGAATCTCCCAGGAGGCTTCCTTCCA...AGTGTGCCATGATGTGAGTGGACCTGGCTGGAATCTTCGGAGAGCGACTGAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp TGTAGCTACCACCACTGCTTCCATTCACTTATTGGAACACCAAGGCATGGCCCCAAGTGGAGCTGGAAGTaGGTGAAGAAGGCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: CSYHHCFHSLIGTPRHGPKWSWK*VKKAPW
Trigger: CCAAGGAGCCTTCTTCACCCACTTCCAGCTCCACTT...GGGGCCATGCCTTGGTGTTCCAATAAGTGAATGGAAGCAGTGGTGGTAGCTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp AGCTTTCCCTCTTCATCTGGGCATCTAAGTCCTTTACCCCTCAAGACCACTGCTAGCACCAGCTGTGGATaGGACCTCAGCGCAGCTAAT +
Preference number: 4 (lower is better)
Translates to: SFPSSSGHLSPLPLKTTASTSCG*DLSAAN
Trigger: ATTAGCTGCGCTGAGGTCCCATCCACAGCTGGTGCT...AGCAGTGGTCTTGAGGGGTAAAGGACTTAGATGCCCAGATGAAGAGGGAAAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR TCA 90 bp ACACCAACCTCCCTAAGTACTTCCTCTGCCCTCCATCAGCATTTGAAGTCTCTGTCTCCTCAGCCTGATTaGAGCCACAGATCTGGCAGA +
Preference number: 4 (lower is better)
Translates to: TPTSLSTSSALHQHLKSLSPQPD*SHRSGR
Trigger: TCTGCCAGATCTGTGGCTTCAATCAGGCTGAGGAGA...CAGAGACTTCAAATGCTGATGGAGGGCAGAGGAAGTACTTAGGGAGGTTGGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR TCA 90 bp TGTATTTCCCCACTTGCTACATGGCCTTCACCACTGCTTCACATCTGTCTGCTAGTGCTCTCCTCAGCCTaGTTGAAGCCACAGATCTGG +
Preference number: 4 (lower is better)
Translates to: CISPLATWPSPLLHICLLVLSSA*LKPQIW
Trigger: CCAGATCTGTGGCTTCAATCAGGCTGAGGAGAGCAC...TAGCAGACAGATGTGAAGCAGTGGTGAAGGCCATGTAGCAAGTGGGGAAATACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR TCA 90 bp GTATTTCCCCACTTGCTACATGGCCTTCACCACTGCTTCACATCTGTCTGCTACCTGTGTCACTCCTCATaGGAAAAGAGGCTCTGGTGC +
Preference number: 4 (lower is better)
Translates to: VFPHLLHGLHHCFTSVCYLCHSS*EKRLWC
Trigger: GCACCAGAGCCTCTTTTCTCATGAGGAGTGACACAG...GTAGCAGACAGATGTGAAGCAGTGGTGAAGGCCATGTAGCAAGTGGGGAAATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR TCA 90 bp GCCTCTGACACCAACCTCCCTAAGTACTTCCTCTGCCCTCCATCAGCATTTGAATGTTGCTGGGCGTCTTaGAGGTGTACACATCCTCAT +
Preference number: 4 (lower is better)
Translates to: ASDTNLPKYFLCPPSAFECCWAS*RCTHPH
Trigger: ATGAGGATGTGTACACCTTCAAGACGCCCAGCAACA...TTCAAATGCTGATGGAGGGCAGAGGAAGTACTTAGGGAGGTTGGTGTCAGAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR TCA 90 bp GTATTTCCCCACTTGCTACATGGCCTTCACCACTGCTTCACATCTGTCTGCTACCAGGAAGAAGCTCGGTaGAGTCGGCTGTTGTCCATT +
Preference number: 4 (lower is better)
Translates to: VFPHLLHGLHHCFTSVCYQEEAR*SRLLSI
Trigger: AATGGACAACAGCCGACTTCACCGAGCTTCTTCCTG...GTAGCAGACAGATGTGAAGCAGTGGTGAAGGCCATGTAGCAAGTGGGGAAATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR TCA 90 bp TGTATTTCCCCACTTGCTACATGGCCTTCACCACTGCTTCACATCTGTCTGCTATGGTTTGCTGGTCCTTaGCTCCCTGGGTTGGTGAGA +
Preference number: 4 (lower is better)
Translates to: CISPLATWPSPLLHICLLWFAGP*LPGLVR
Trigger: TCTCACCAACCCAGGGAGTCAAGGACCAGCAAACCA...TAGCAGACAGATGTGAAGCAGTGGTGAAGGCCATGTAGCAAGTGGGGAAATACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR TCA 90 bp TGTATTTCCCCACTTGCTACATGGCCTTCACCACTGCTTCACATCTGTCTGCTACCGTCCCTGCTAATCTaGTGGCCTTTCAAACCTGGG +
Preference number: 4 (lower is better)
Translates to: CISPLATWPSPLLHICLLPSLLI*WPFKPG
Trigger: CCCAGGTTTGAAAGGCCATCAGATTAGCAGGGACGG...TAGCAGACAGATGTGAAGCAGTGGTGAAGGCCATGTAGCAAGTGGGGAAATACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR TCA 90 bp ACCTCAGTCGCTCTCCGAAGATTCCAGCCAGGTCCACTCACATCATGGCACACTGAGAGGTGCAGCTCTTaGAGAAATAACTTCTTCCAG +
Preference number: 4 (lower is better)
Translates to: TSVALRRFQPGPLTSWHTERCSS*RNNFFQ
Trigger: CTGGAAGAAGTTATTTCTTCAAGAGCTGCACCTCTC...AGTGTGCCATGATGTGAGTGGACCTGGCTGGAATCTTCGGAGAGCGACTGAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR TCA 90 bp CTGTCCCATCCTAGGAACGGTCCTCATGTCACACCACCATGCACACCACTCTTGCTCATCGTTCTCACTTaGCTTAACCTTGCAGAAGTG +
Preference number: 4 (lower is better)
Translates to: LSHPRNGPHVTPPCTPLLLIVLT*LNLAEV
Trigger: CACTTCTGCAAGGTTAAGTCAAGTGAGAACGATGAG...CAAGAGTGGTGTGCATGGTGGTGTGACATGAGGACCGTTCCTAGGATGGGACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp ACACCTCAGTCGCTCTCCGAAGATTCCAGCCAGGTCCACTCACATCATGGCACAACTCCTTGCATTTTCTaGTCTTCGGCTTATGCACTG +
Preference number: 4 (lower is better)
Translates to: TPQSLSEDSSQVHSHHGTTPCIF*SSAYAL
Trigger: CAGTGCATAAGCCGAAGAGCAGAAAATGCAAGGAGT...TGTGCCATGATGTGAGTGGACCTGGCTGGAATCTTCGGAGAGCGACTGAGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp TGTAGCTACCACCACTGCTTCCATTCACTTATTGGAACACCAAGGCATGGCCCCCTGGGAATTATCACCTaGTCGTTCCATGGCCAACAG +
Preference number: 4 (lower is better)
Translates to: CSYHHCFHSLIGTPRHGPLGIIT*SFHGQQ
Trigger: CTGTTGGCCATGGAACGAGCAGGTGATAATTCCCAG...GGGGCCATGCCTTGGTGTTCCAATAAGTGAATGGAAGCAGTGGTGGTAGCTACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp TGTATTTCCCCACTTGCTACATGGCCTTCACCACTGCTTCACATCTGTCTGCTAAGCCCTGCTCCTTGCTaGTCTAGGTTGGCCATCAGT +
Preference number: 4 (lower is better)
Translates to: CISPLATWPSPLLHICLLSPAPC*SRLAIS
Trigger: ACTGATGGCCAACCTAGAGCAGCAAGGAGCAGGGCT...TAGCAGACAGATGTGAAGCAGTGGTGAAGGCCATGTAGCAAGTGGGGAAATACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp ACCTCAGTCGCTCTCCGAAGATTCCAGCCAGGTCCACTCACATCATGGCACACTATGTATTTCCCCACTTaGTACATGGCCTTCACCACT +
Preference number: 4 (lower is better)
Translates to: TSVALRRFQPGPLTSWHTMYFPT*YMAFTT
Trigger: AGTGGTGAAGGCCATGTAGCAAGTGGGGAAATACAT...AGTGTGCCATGATGTGAGTGGACCTGGCTGGAATCTTCGGAGAGCGACTGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp ACACCAACCTCCCTAAGTACTTCCTCTGCCCTCCATCAGCATTTGAAGTCTCTGGACTCGTTCCTACCCTaGGATCTGACATACGCCACA +
Preference number: 4 (lower is better)
Translates to: TPTSLSTSSALHQHLKSLDSFLP*DLTYAT
Trigger: TGTGGCGTATGTCAGATCGCAGGGTAGGAACGAGTC...CAGAGACTTCAAATGCTGATGGAGGGCAGAGGAAGTACTTAGGGAGGTTGGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp CTGCTACCTCTGTGCCCGACTTCCACTGCACTGCTCACTGCAAAGAAACTCACTATGTTTATGGGAGGCTaGAATAGTCTGGGCCCACTT +
Preference number: 4 (lower is better)
Translates to: LLPLCPTSTALLTAKKLTMFMGG*NSLGPL
Trigger: AAGTGGGCCCAGACTATTGCAGCCTCCCATAAACAT...AGTGAGTTTCTTTGCAGTGAGCAGTGCAGTGGAAGTCGGGCACAGAGGTAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp GCCTCTGACACCAACCTCCCTAAGTACTTCCTCTGCCCTCCATCAGCATTTGAACTCTACCCCTACACTTaGACCCGAGGGATTTTGGTA +
Preference number: 4 (lower is better)
Translates to: ASDTNLPKYFLCPPSAFELYPYT*TRGILV
Trigger: TACCAAAATCCCTCGGGTGCAAGTGTAGGGGTAGAG...TTCAAATGCTGATGGAGGGCAGAGGAAGTACTTAGGGAGGTTGGTGTCAGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp TGTAGCTACCACCACTGCTTCCATTCACTTATTGGAACACCAAGGCATGGCCCCTGCCCTGAGAGAAGCTaGCACTCCTTGCATTTTCTG +
Preference number: 4 (lower is better)
Translates to: CSYHHCFHSLIGTPRHGPCPERS*HSLHFL
Trigger: CAGAAAATGCAAGGAGTGCCAGCTTCTCTCAGGGCA...GGGGCCATGCCTTGGTGTTCCAATAAGTGAATGGAAGCAGTGGTGGTAGCTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp TGTATTTCCCCACTTGCTACATGGCCTTCACCACTGCTTCACATCTGTCTGCTATGTGCCGGCTCGGCTTaGGAAGGCTATAGAAGCCAT +
Preference number: 4 (lower is better)
Translates to: CISPLATWPSPLLHICLLCAGSA*EGYRSH
Trigger: ATGGCTTCTATAGCCTTCCCAAGCCGAGCCGGCACA...TAGCAGACAGATGTGAAGCAGTGGTGAAGGCCATGTAGCAAGTGGGGAAATACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp ACACCAACCTCCCTAAGTACTTCCTCTGCCCTCCATCAGCATTTGAAGTCTCTGCAACTCCATCACTCATaGATTCAGCAGACCGGCCTG +
Preference number: 4 (lower is better)
Translates to: TPTSLSTSSALHQHLKSLQLHHS*IQQTGL
Trigger: CAGGCCGGTCTGCTGAATCCATGAGTGATGGAGTTG...CAGAGACTTCAAATGCTGATGGAGGGCAGAGGAAGTACTTAGGGAGGTTGGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp TGTAGCTACCACCACTGCTTCCATTCACTTATTGGAACACCAAGGCATGGCCCCCAGGTCAAGTGGTGTTaGCTTTGCTTTCCGATCAGG +
Preference number: 4 (lower is better)
Translates to: CSYHHCFHSLIGTPRHGPQVKWC*LCFPIR
Trigger: CCTGATCGGAAAGCAAAGCCAACACCACTTGACCTG...GGGGCCATGCCTTGGTGTTCCAATAAGTGAATGGAAGCAGTGGTGGTAGCTACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp TGTAGCTACCACCACTGCTTCCATTCACTTATTGGAACACCAAGGCATGGCCCCGTTCCTCAGGTCAAGTaGTGTTGGCTTTGCTTTCCG +
Preference number: 4 (lower is better)
Translates to: CSYHHCFHSLIGTPRHGPVPQVK*CWLCFP
Trigger: CGGAAAGCAAAGCCAACACCACTTGACCTGAGGAAC...GGGGCCATGCCTTGGTGTTCCAATAAGTGAATGGAAGCAGTGGTGGTAGCTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp CTGCTACCTCTGTGCCCGACTTCCACTGCACTGCTCACTGCAAAGAAACTCACTGGGAGATGCAGACACTaGGTTTTGCATAGGGACATA +
Preference number: 4 (lower is better)
Translates to: LLPLCPTSTALLTAKKLTGRCRH*VLHRDI
Trigger: TATGTCCCTATGCAAAACCCAGTGTCTGCATCTCCC...AGTGAGTTTCTTTGCAGTGAGCAGTGCAGTGGAAGTCGGGCACAGAGGTAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp ATGGGGAAGGAAGAACTCTGGAAATGGGATAGGGGTGCTGGGCCGAGATGTCCCCAGGAAGTCATTGTTTaGGAGGAAGAAGTTCTGTTC +
Preference number: 4 (lower is better)
Translates to: MGKEELWKWDRGAGPRCPQEVIV*EEEVLF
Trigger: GAACAGAACTTCTTCCTCCCAAACAATGACTTCCTG...GGGACATCTCGGCCCAGCACCCCTATCCCATTTCCAGAGTTCTTCCTTCCCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp CTGCTACCTCTGTGCCCGACTTCCACTGCACTGCTCACTGCAAAGAAACTCACTAACTATGCATGCTCATaGGAGCTGAAAGGGGAATGG +
Preference number: 4 (lower is better)
Translates to: LLPLCPTSTALLTAKKLTNYACS*ELKGEW
Trigger: CCATTCCCCTTTCAGCTCCCATGAGCATGCATAGTT...AGTGAGTTTCTTTGCAGTGAGCAGTGCAGTGGAAGTCGGGCACAGAGGTAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp ACCTCAGTCGCTCTCCGAAGATTCCAGCCAGGTCCACTCACATCATGGCACACTATGCTCACATGTTTATaGGAGGCTGCAATAGTCTGG +
Preference number: 4 (lower is better)
Translates to: TSVALRRFQPGPLTSWHTMLTCL*EAAIVW
Trigger: CCAGACTATTGCAGCCTCCCATAAACATGTGAGCAT...AGTGTGCCATGATGTGAGTGGACCTGGCTGGAATCTTCGGAGAGCGACTGAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp TGCTTTCTCCTTGTCCTGCCTGACCCACTGTCCCATCCTAGGAACGGTCCTCATATGCTCACATGTTTATaGGAGGCTGCAATAGTCTGG +
Preference number: 4 (lower is better)
Translates to: CFLLVLPDPLSHPRNGPHMLTCL*EAAIVW
Trigger: CCAGACTATTGCAGCCTCCCATAAACATGTGAGCAT...ATGAGGACCGTTCCTAGGATGGGACAGTGGGTCAGGCAGGACAAGGAGAAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp TGTATTTCCCCACTTGCTACATGGCCTTCACCACTGCTTCACATCTGTCTGCTAGTAGTGGGTGGAGGGTaGGGATATGCTAGATACGGC +
Preference number: 4 (lower is better)
Translates to: CISPLATWPSPLLHICLLVVGGG*GYARYG
Trigger: GCCGTATCTAGCATATCCCCACCCTCCACCCACTAC...TAGCAGACAGATGTGAAGCAGTGGTGAAGGCCATGTAGCAAGTGGGGAAATACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp ACACCAACCTCCCTAAGTACTTCCTCTGCCCTCCATCAGCATTTGAAGTCTCTGAATCACATGACAGCCTaGATCTCTTGGGGACCCCCT +
Preference number: 4 (lower is better)
Translates to: TPTSLSTSSALHQHLKSLNHMTA*ISWGPP
Trigger: AGGGGGTCCCCAAGAGATCCAGGCTGTCATGTGATT...CAGAGACTTCAAATGCTGATGGAGGGCAGAGGAAGTACTTAGGGAGGTTGGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR CAA 72 bp ACCTCCCTAAGTACTTCCTCTGCCCTCCATCAGCATTaGAAGTCTCTGTCTGATGGCCATCACCACTGTCTC +
Preference number: 4 (lower is better)
Translates to: TSLSTSSALHQH*KSLSDGHHHCL
Trigger: GAGACAGTGGTGATGGCCATCAGACAGAGACTTCAAATGCTGATGGAGGGCAGAGGAAGTACTTAGGGAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR TCA 90 bp ACACCAACCTCCCTAAGTACTTCCTCTGCCCTCCATCAGCATTTGAAGTCTCTGAAGTGCTTTGAAGGCTaGGACTGGCAGAGTAGAGAG +
Preference number: 4 (lower is better)
Translates to: TPTSLSTSSALHQHLKSLKCFEG*DWQSRE
Trigger: CTCTCTACTCTGCCAGTCTCAGCCTTCAAAGCACTT...CAGAGACTTCAAATGCTGATGGAGGGCAGAGGAAGTACTTAGGGAGGTTGGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR TCA 90 bp TGTATTTCCCCACTTGCTACATGGCCTTCACCACTGCTTCACATCTGTCTGCTAAGGCCATTGGTCTGGTaGACTATGCATGCTCATGGG +
Preference number: 4 (lower is better)
Translates to: CISPLATWPSPLLHICLLRPLVW*TMHAHG
Trigger: CCCATGAGCATGCATAGTTCACCAGACCAATGGCCT...TAGCAGACAGATGTGAAGCAGTGGTGAAGGCCATGTAGCAAGTGGGGAAATACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp GTATTTCCCCACTTGCTACATGGCCTTCACCACTGCTTCACATCTGTCTGCTACGAAGCTGGCACTCCTTaGATTTTCTGCTCTTCGGCT +
Preference number: 4 (lower is better)
Translates to: VFPHLLHGLHHCFTSVCYEAGTP*IFCSSA
Trigger: AGCCGAAGAGCAGAAAATGCAAGGAGTGCCAGCTTC...GTAGCAGACAGATGTGAAGCAGTGGTGAAGGCCATGTAGCAAGTGGGGAAATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp ACACCAACCTCCCTAAGTACTTCCTCTGCCCTCCATCAGCATTTGAAGTCTCTGCTGGTGAACTATGCATaGTCATGGGAGCTGAAAGGG +
Preference number: 4 (lower is better)
Translates to: TPTSLSTSSALHQHLKSLLVNYA*SWELKG
Trigger: CCCTTTCAGCTCCCATGAGCATGCATAGTTCACCAG...CAGAGACTTCAAATGCTGATGGAGGGCAGAGGAAGTACTTAGGGAGGTTGGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp AGAGTGGCCTGTAGCTCCAGAGTTCTGGGGACCCAGACCCCACAGTGTCCTTGTCAAATACACAACACATaGCACCATAAATCACATGAC +
Preference number: 4 (lower is better)
Translates to: RVACSSRVLGTQTPQCPCQIHNT*HHKSHD
Trigger: GTCATGTGATTTATGGTGGCATGTGTTGTGTATTTG...ACAAGGACACTGTGGGGTCTGGGTCCCCAGAACTCTGGAGCTACAGGCCACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp CGAGCTCCAAGCCCTGCTCCTTGCTGCTCTAGGTTGGCCATCAGTTTTCCCTTCACTGTCATGGCATTGTaGTTTTTGTCCAGAGTGAAT +
Preference number: 4 (lower is better)
Translates to: RAPSPAPCCSRLAISFPFTVMAL*FLSRVN
Trigger: ATTCACTCTGGACAAAAACCACAATGCCATGACAGT...GAAGGGAAAACTGATGGCCAACCTAGAGCAGCAAGGAGCAGGGCTTGGAGCTCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp TGTATTTCCCCACTTGCTACATGGCCTTCACCACTGCTTCACATCTGTCTGCTAAAAGTGATGGGCCCCTaGGCTCATTGGGATGTAGAC +
Preference number: 4 (lower is better)
Translates to: CISPLATWPSPLLHICLLKVMGP*AHWDVD
Trigger: GTCTACATCCCAATGAGCCCAGGGGCCCATCACTTT...TAGCAGACAGATGTGAAGCAGTGGTGAAGGCCATGTAGCAAGTGGGGAAATACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp AGCTTTCCCTCTTCATCTGGGCATCTAAGTCCTTTACCCCTCAAGACCACTGCTGTTCCTCAGGTCAAGTaGTGTTGGCTTTGCTTTCCG +
Preference number: 4 (lower is better)
Translates to: SFPSSSGHLSPLPLKTTAVPQVK*CWLCFP
Trigger: CGGAAAGCAAAGCCAACACCACTTGACCTGAGGAAC...AGCAGTGGTCTTGAGGGGTAAAGGACTTAGATGCCCAGATGAAGAGGGAAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp CTGCTACCTCTGTGCCCGACTTCCACTGCACTGCTCACTGCAAAGAAACTCACTCTTTCCCTCTTCATCTaGGCATCTAAGTCCTTTACC +
Preference number: 4 (lower is better)
Translates to: LLPLCPTSTALLTAKKLTLSLFI*ASKSFT
Trigger: GGTAAAGGACTTAGATGCCCAGATGAAGAGGGAAAG...AGTGAGTTTCTTTGCAGTGAGCAGTGCAGTGGAAGTCGGGCACAGAGGTAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp GTATTTCCCCACTTGCTACATGGCCTTCACCACTGCTTCACATCTGTCTGCTACATGGCCTTTCAAACCTaGGGAGGAGAGTCCAAGATG +
Preference number: 4 (lower is better)
Translates to: VFPHLLHGLHHCFTSVCYMAFQT*GGESKM
Trigger: CATCTTGGACTCTCCTCCCCAGGTTTGAAAGGCCAT...GTAGCAGACAGATGTGAAGCAGTGGTGAAGGCCATGTAGCAAGTGGGGAAATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp GTATTTCCCCACTTGCTACATGGCCTTCACCACTGCTTCACATCTGTCTGCTACCCCTACACTTCTGAGTaGCTGGACCCATATGCTCAA +
Preference number: 4 (lower is better)
Translates to: VFPHLLHGLHHCFTSVCYPYTSE*LDPYAQ
Trigger: TTGAGCATATGGGTCCAGCCACTCAGAAGTGTAGGG...GTAGCAGACAGATGTGAAGCAGTGGTGAAGGCCATGTAGCAAGTGGGGAAATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp ACACCAACCTCCCTAAGTACTTCCTCTGCCCTCCATCAGCATTTGAAGTCTCTGGGTCCACTCACATCATaGCACACTCAGAACATGCTC +
Preference number: 4 (lower is better)
Translates to: TPTSLSTSSALHQHLKSLGPLTS*HTQNML
Trigger: GAGCATGTTCTGAGTGTGCCATGATGTGAGTGGACC...CAGAGACTTCAAATGCTGATGGAGGGCAGAGGAAGTACTTAGGGAGGTTGGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp ACACCAACCTCCCTAAGTACTTCCTCTGCCCTCCATCAGCATTTGAAGTCTCTGGTGGACTTTGACCCATaGATAGGCCAAAGGACCAGT +
Preference number: 4 (lower is better)
Translates to: TPTSLSTSSALHQHLKSLVDFDP*IGQRTS
Trigger: ACTGGTCCTTTGGCCTATCCATGGGTCAAAGTCCAC...CAGAGACTTCAAATGCTGATGGAGGGCAGAGGAAGTACTTAGGGAGGTTGGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp TGTATTTCCCCACTTGCTACATGGCCTTCACCACTGCTTCACATCTGTCTGCTAAAGTGGAGCTGGAAGTaGGTGAAGAAGGCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: CISPLATWPSPLLHICLLKWSWK*VKKAPW
Trigger: CCAAGGAGCCTTCTTCACCCACTTCCAGCTCCACTT...TAGCAGACAGATGTGAAGCAGTGGTGAAGGCCATGTAGCAAGTGGGGAAATACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR TCA 90 bp TGCTTTCTCCTTGTCCTGCCTGACCCACTGTCCCATCCTAGGAACGGTCCTCATTGCGTTCACTGGTCTTaGTGTCAAACACAAAACTAT +
Preference number: 4 (lower is better)
Translates to: CFLLVLPDPLSHPRNGPHCVHWS*CQTQNY
Trigger: ATAGTTTTGTGTTTGACATCAAGACCAGTGAACGCA...ATGAGGACCGTTCCTAGGATGGGACAGTGGGTCAGGCAGGACAAGGAGAAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR TCA 90 bp ACACCAACCTCCCTAAGTACTTCCTCTGCCCTCCATCAGCATTTGAAGTCTCTGATCTGCTATTTTCACTaGTTGGCGGTCTCTGCTGAG +
Preference number: 4 (lower is better)
Translates to: TPTSLSTSSALHQHLKSLICYFH*LAVSAE
Trigger: CTCAGCAGAGACCGCCAATCAGTGAAAATAGCAGAT...CAGAGACTTCAAATGCTGATGGAGGGCAGAGGAAGTACTTAGGGAGGTTGGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR TCA 90 bp GTATTTCCCCACTTGCTACATGGCCTTCACCACTGCTTCACATCTGTCTGCTACAGACTTGGTGATAGGTaGCTTGAAGGGGAGTTCATC +
Preference number: 4 (lower is better)
Translates to: VFPHLLHGLHHCFTSVCYRLGDR*LEGEFI
Trigger: GATGAACTCCCCTTCAAGTCACCTATCACCAAGTCT...GTAGCAGACAGATGTGAAGCAGTGGTGAAGGCCATGTAGCAAGTGGGGAAATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp ACACCAACCTCCCTAAGTACTTCCTCTGCCCTCCATCAGCATTTGAAGTCTCTGCTGCTCTTCGGCTTATaGACTGGTGCAAGTAGAGAT +
Preference number: 4 (lower is better)
Translates to: TPTSLSTSSALHQHLKSLLLFGL*TGASRD
Trigger: ATCTCTACTTGCACCAGTGCATAAGCCGAAGAGCAG...CAGAGACTTCAAATGCTGATGGAGGGCAGAGGAAGTACTTAGGGAGGTTGGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp TCACTTATTGGAACACCAAGGCATGGCCCCTACACTTCTGAGTGGCTGGACCCATGGACTTTATTGTCCTaGTCCAACACCACAGTAGAA +
Preference number: 4 (lower is better)
Translates to: SLIGTPRHGPYTSEWLDPWTLLS*SNTTVE
Trigger: TTCTACTGTGGTGTTGGAGCAGGACAATAAAGTCCA...TGGGTCCAGCCACTCAGAAGTGTAGGGGCCATGCCTTGGTGTTCCAATAAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp AGCTTTCCCTCTTCATCTGGGCATCTAAGTCCTTTACCCCTCAAGACCACTGCTTCCGCAGAGGCTTCTTaGAGTGATCGTTCTTGTAGT +
Preference number: 4 (lower is better)
Translates to: SFPSSSGHLSPLPLKTTASAEAS*SDRSCS
Trigger: ACTACAAGAACGATCACTCCAAGAAGCCTCTGCGGA...AGCAGTGGTCTTGAGGGGTAAAGGACTTAGATGCCCAGATGAAGAGGGAAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp TGTATTTCCCCACTTGCTACATGGCCTTCACCACTGCTTCACATCTGTCTGCTATGCCCTGAGAGAAGCTaGCACTCCTTGCATTTTCTG +
Preference number: 4 (lower is better)
Translates to: CISPLATWPSPLLHICLLCPERS*HSLHFL
Trigger: CAGAAAATGCAAGGAGTGCCAGCTTCTCTCAGGGCA...TAGCAGACAGATGTGAAGCAGTGGTGAAGGCCATGTAGCAAGTGGGGAAATACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp ACCTCAGTCGCTCTCCGAAGATTCCAGCCAGGTCCACTCACATCATGGCACACTACTGTCATGGCATTGTaGTTTTTGTCCAGAGTGAAT +
Preference number: 4 (lower is better)
Translates to: TSVALRRFQPGPLTSWHTTVMAL*FLSRVN
Trigger: ATTCACTCTGGACAAAAACCACAATGCCATGACAGT...AGTGTGCCATGATGTGAGTGGACCTGGCTGGAATCTTCGGAGAGCGACTGAGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp ACACCAACCTCCCTAAGTACTTCCTCTGCCCTCCATCAGCATTTGAAGTCTCTGGAATGGCTAGGCCATTaGTCTGGTGAACTATGCATG +
Preference number: 4 (lower is better)
Translates to: TPTSLSTSSALHQHLKSLEWLGH*SGELCM
Trigger: CATGCATAGTTCACCAGACCAATGGCCTAGCCATTC...CAGAGACTTCAAATGCTGATGGAGGGCAGAGGAAGTACTTAGGGAGGTTGGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp TGTATTTCCCCACTTGCTACATGGCCTTCACCACTGCTTCACATCTGTCTGCTAACACTTCTGAGTGGCTaGACCCATATGCTCAAAGGC +
Preference number: 4 (lower is better)
Translates to: CISPLATWPSPLLHICLLTLLSG*THMLKG
Trigger: GCCTTTGAGCATATGGGTCCAGCCACTCAGAAGTGT...TAGCAGACAGATGTGAAGCAGTGGTGAAGGCCATGTAGCAAGTGGGGAAATACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp AGCTTTCCCTCTTCATCTGGGCATCTAAGTCCTTTACCCCTCAAGACCACTGCTCTTCCATTCACTTATTaGAACACCAAGGCATGGCCC +
Preference number: 4 (lower is better)
Translates to: SFPSSSGHLSPLPLKTTALPFTY*NTKAWP
Trigger: GGGCCATGCCTTGGTGTTCCAATAAGTGAATGGAAG...AGCAGTGGTCTTGAGGGGTAAAGGACTTAGATGCCCAGATGAAGAGGGAAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR TCA 90 bp TGTATTTCCCCACTTGCTACATGGCCTTCACCACTGCTTCACATCTGTCTGCTAATCTGCTATTTTCACTaGTTGGCGGTCTCTGCTGAG +
Preference number: 4 (lower is better)
Translates to: CISPLATWPSPLLHICLLICYFH*LAVSAE
Trigger: CTCAGCAGAGACCGCCAATCAGTGAAAATAGCAGAT...TAGCAGACAGATGTGAAGCAGTGGTGAAGGCCATGTAGCAAGTGGGGAAATACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR TCA 90 bp AGCTTTCCCTCTTCATCTGGGCATCTAAGTCCTTTACCCCTCAAGACCACTGCTGAGAGGTGCAGCTCTTaGAGAAATAACTTCTTCCAG +
Preference number: 4 (lower is better)
Translates to: SFPSSSGHLSPLPLKTTAERCSS*RNNFFQ
Trigger: CTGGAAGAAGTTATTTCTTCAAGAGCTGCACCTCTC...AGCAGTGGTCTTGAGGGGTAAAGGACTTAGATGCCCAGATGAAGAGGGAAAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp ACACCTCAGTCGCTCTCCGAAGATTCCAGCCAGGTCCACTCACATCATGGCACAAACACAAAACTATCCTaGAGCTCCTTCTTGTTAAAG +
Preference number: 4 (lower is better)
Translates to: TPQSLSEDSSQVHSHHGTNTKLS*SSFLLK
Trigger: CTTTAACAAGAAGGAGCTGCAGGATAGTTTTGTGTT...TGTGCCATGATGTGAGTGGACCTGGCTGGAATCTTCGGAGAGCGACTGAGGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp ACACCTCAGTCGCTCTCCGAAGATTCCAGCCAGGTCCACTCACATCATGGCACACAAATACACAACACATaGCACCATAAATCACATGAC +
Preference number: 4 (lower is better)
Translates to: TPQSLSEDSSQVHSHHGTQIHNT*HHKSHD
Trigger: GTCATGTGATTTATGGTGGCATGTGTTGTGTATTTG...TGTGCCATGATGTGAGTGGACCTGGCTGGAATCTTCGGAGAGCGACTGAGGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp GCCTCTGACACCAACCTCCCTAAGTACTTCCTCTGCCCTCCATCAGCATTTGAATGGACTTTATTGTCCTaGTCCAACACCACAGTAGAA +
Preference number: 4 (lower is better)
Translates to: ASDTNLPKYFLCPPSAFEWTLLS*SNTTVE
Trigger: TTCTACTGTGGTGTTGGAGCAGGACAATAAAGTCCA...TTCAAATGCTGATGGAGGGCAGAGGAAGTACTTAGGGAGGTTGGTGTCAGAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp TGTATTTCCCCACTTGCTACATGGCCTTCACCACTGCTTCACATCTGTCTGCTAAACTATGCATGCTCATaGGAGCTGAAAGGGGAATGG +
Preference number: 4 (lower is better)
Translates to: CISPLATWPSPLLHICLLNYACS*ELKGEW
Trigger: CCATTCCCCTTTCAGCTCCCATGAGCATGCATAGTT...TAGCAGACAGATGTGAAGCAGTGGTGAAGGCCATGTAGCAAGTGGGGAAATACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR TCA 90 bp TGTATTTCCCCACTTGCTACATGGCCTTCACCACTGCTTCACATCTGTCTGCTACTCATCGTTCTCACTTaGCTTAACCTTGCAGAAGTG +
Preference number: 4 (lower is better)
Translates to: CISPLATWPSPLLHICLLLIVLT*LNLAEV
Trigger: CACTTCTGCAAGGTTAAGTCAAGTGAGAACGATGAG...TAGCAGACAGATGTGAAGCAGTGGTGAAGGCCATGTAGCAAGTGGGGAAATACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR CAA 72 bp ATTTCACCTCTCATCCTTCCATCTCTACCCCTACACTaGCACCCGAGGGATTTTGGTAGTTACCAGAATAGG +
Preference number: 4 (lower is better)
Translates to: ISPLILPSLPLH*HPRDFGSYQNR
Trigger: CCTATTCTGGTAACTACCAAAATCCCTCGGGTGCAAGTGTAGGGGTAGAGATGGAAGGATGAGAGGTGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR GCA 90 bp TGTATTTCCCCACTTGCTACATGGCCTTCACCACTGCTTCACATCTGTCTGCTATGTAGCTACCACCACTaGTTCCATTCACTTATTGGA +
Preference number: 4 (lower is better)
Translates to: CISPLATWPSPLLHICLLCSYHH*FHSLIG
Trigger: TCCAATAAGTGAATGGAAGCAGTGGTGGTAGCTACA...TAGCAGACAGATGTGAAGCAGTGGTGAAGGCCATGTAGCAAGTGGGGAAATACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CCA 90 bp TGTATTTCCCCACTTGCTACATGGCCTTCACCACTGCTTCACATCTGTCTGCTACAGGAAGTCATTGTTTaGGAGGAAGAAGTTCTGTTC +
Preference number: 4 (lower is better)
Translates to: CISPLATWPSPLLHICLLQEVIV*EEEVLF
Trigger: GAACAGAACTTCTTCCTCCCAAACAATGACTTCCTG...TAGCAGACAGATGTGAAGCAGTGGTGAAGGCCATGTAGCAAGTGGGGAAATACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
3UTR CAA 72 bp GTCACAGGAATGGGGCATACTTTGTTAACTTCTACATaGGAAACCACTAAAGTCAAGCTAGGAGGGGACTGG +
Preference number: 4 (lower is better)
Translates to: VTGMGHTLLTST*ETTKVKLGGDW
Trigger: CCAGTCCCCTCCTAGCTTGACTTTAGTGGTTTCCAATGTAGAAGTTAACAAAGTATGCCCCATTCCTGTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CAA 90 bp GGGCCTAGAGTGGCCTGTAGCTCCAGAGTTCTGGGGACCCAGACCCCACAGTGTGGTGAAGAAGGCTCCTaGGAGAGCCCCAGGCAGGGG +
Preference number: 5 (lower is better)
Translates to: GPRVACSSRVLGTQTPQCGEEGS*ESPRQG
Trigger: CCCCTGCCTGGGGCTCTCCAAGGAGCCTTCTTCACC...ACACTGTGGGGTCTGGGTCCCCAGAACTCTGGAGCTACAGGCCACTCTAGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CAA 90 bp GGGCCTAGAGTGGCCTGTAGCTCCAGAGTTCTGGGGACCCAGACCCCACAGTGTGCTTGGTCGCCCAGCTaGGTCCAAGCCTTCCCCTGT +
Preference number: 5 (lower is better)
Translates to: GPRVACSSRVLGTQTPQCAWSPS*VQAFPC
Trigger: ACAGGGGAAGGCTTGGACCAAGCTGGGCGACCAAGC...ACACTGTGGGGTCTGGGTCCCCAGAACTCTGGAGCTACAGGCCACTCTAGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CAA 90 bp GGGCCTAGAGTGGCCTGTAGCTCCAGAGTTCTGGGGACCCAGACCCCACAGTGTTCCTGCCCCATGTGCTaGGTCGCCCAGCTTGGTCCA +
Preference number: 5 (lower is better)
Translates to: GPRVACSSRVLGTQTPQCSCPMC*VAQLGP
Trigger: TGGACCAAGCTGGGCGACCAAGCACATGGGGCAGGA...ACACTGTGGGGTCTGGGTCCCCAGAACTCTGGAGCTACAGGCCACTCTAGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CAA 90 bp TTTGTCCTTCATCTTCTGCCTCTGCACCCCACAGCAGCTGTCCTGCCATGGCCTGCTTGCGGTGGGGGCTaGGGGAGCTCGGCTGGAAGT +
Preference number: 5 (lower is better)
Translates to: FVLHLLPLHPTAAVLPWPACGGG*GSSAGS
Trigger: ACTTCCAGCCGAGCTCCCCAAGCCCCCACCGCAAGC...AGGCCATGGCAGGACAGCTGCTGTGGGGTGCAGAGGCAGAAGATGAAGGACAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CAA 90 bp GCTTCACATCTGTCTGCTACCTCTGTGCCCGACTTCCACTGCACTGCTCACTGCGCTTGCGGTGGGGGCTaGGGGAGCTCGGCTGGAAGT +
Preference number: 5 (lower is better)
Translates to: ASHLSATSVPDFHCTAHCACGGG*GSSAGS
Trigger: ACTTCCAGCCGAGCTCCCCAAGCCCCCACCGCAAGC...GCAGTGAGCAGTGCAGTGGAAGTCGGGCACAGAGGTAGCAGACAGATGTGAAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CAA 90 bp CGAGCTCCAAGCCCTGCTCCTTGCTGCTCTAGGTTGGCCATCAGTTTTCCCTTCGGGCCCCTGGGCTCATaGGGATGTAGACGCTCTGGG +
Preference number: 5 (lower is better)
Translates to: RAPSPAPCCSRLAISFPFGPLGS*GCRRSG
Trigger: CCCAGAGCGTCTACATCCCAATGAGCCCAGGGGCCC...GAAGGGAAAACTGATGGCCAACCTAGAGCAGCAAGGAGCAGGGCTTGGAGCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CAA 90 bp GCTTCACATCTGTCTGCTACCTCTGTGCCCGACTTCCACTGCACTGCTCACTGCGGCAGAGGAGGTGCCTaGATCAGGCCCTCACCTCCC +
Preference number: 5 (lower is better)
Translates to: ASHLSATSVPDFHCTAHCGRGGA*IRPSPP
Trigger: GGGAGGTGAGGGCCTGATCAAGGCACCTCCTCTGCC...GCAGTGAGCAGTGCAGTGGAAGTCGGGCACAGAGGTAGCAGACAGATGTGAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CAA 90 bp GGGCCTAGAGTGGCCTGTAGCTCCAGAGTTCTGGGGACCCAGACCCCACAGTGTTGCCCTGCTTTCTCCTaGTCCTGCCTGACCCACTGT +
Preference number: 5 (lower is better)
Translates to: GPRVACSSRVLGTQTPQCCPAFS*SCLTHC
Trigger: ACAGTGGGTCAGGCAGGACAAGGAGAAAGCAGGGCA...ACACTGTGGGGTCTGGGTCCCCAGAACTCTGGAGCTACAGGCCACTCTAGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CAA 90 bp TTCTGGGGACCCAGACCCCACAGTGTCCTTGTCATCTCCACCACCCGAGCTCCAATAGTCTGGGCCCACTaGTGGCTGCTGCGGGTACAG +
Preference number: 5 (lower is better)
Translates to: FWGPRPHSVLVISTTRAPIVWAH*WLLRVQ
Trigger: CTGTACCCGCAGCAGCCACAAGTGGGCCCAGACTAT...TGGAGCTCGGGTGGTGGAGATGACAAGGACACTGTGGGGTCTGGGTCCCCAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CAA 90 bp CGAGCTCCAAGCCCTGCTCCTTGCTGCTCTAGGTTGGCCATCAGTTTTCCCTTCGATGGGGCTGAGGACTaGCGCTCTCGGAGAAGGTGC +
Preference number: 5 (lower is better)
Translates to: RAPSPAPCCSRLAISFPFDGAED*RSRRRC
Trigger: GCACCTTCTCCGAGAGCGCAAGTCCTCAGCCCCATC...GAAGGGAAAACTGATGGCCAACCTAGAGCAGCAAGGAGCAGGGCTTGGAGCTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CAA 90 bp CCCTGCTTTCTCCTTGTCCTGCCTGACCCACTGTCCCATCCTAGGAACGGTCCTTCCCTGCACAGGGTGTaGCTGGGCGTCTTGAAGGTG +
Preference number: 5 (lower is better)
Translates to: PCFLLVLPDPLSHPRNGPSLHRV*LGVLKV
Trigger: CACCTTCAAGACGCCCAGCAACACCCTGTGCAGGGA...AGGACCGTTCCTAGGATGGGACAGTGGGTCAGGCAGGACAAGGAGAAAGCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CAA 90 bp AGAGTGGCCTGTAGCTCCAGAGTTCTGGGGACCCAGACCCCACAGTGTCCTTGTGATGAAGTAGATGGCTaGCGGTGGGGGCTTGGGGAG +
Preference number: 5 (lower is better)
Translates to: RVACSSRVLGTQTPQCPCDEVDG*RWGLGE
Trigger: CTCCCCAAGCCCCCACCGCAAGCCATCTACTTCATC...ACAAGGACACTGTGGGGTCTGGGTCCCCAGAACTCTGGAGCTACAGGCCACTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CAA 90 bp ACCTCAGTCGCTCTCCGAAGATTCCAGCCAGGTCCACTCACATCATGGCACACTGGCAGAGGAGGTGCCTaGATCAGGCCCTCACCTCCC +
Preference number: 5 (lower is better)
Translates to: TSVALRRFQPGPLTSWHTGRGGA*IRPSPP
Trigger: GGGAGGTGAGGGCCTGATCAAGGCACCTCCTCTGCC...AGTGTGCCATGATGTGAGTGGACCTGGCTGGAATCTTCGGAGAGCGACTGAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CAA 90 bp CCCTGCTTTCTCCTTGTCCTGCCTGACCCACTGTCCCATCCTAGGAACGGTCCTGATACGGCTGGTAGTTaGGGGCCTGTGAGCCAGAGC +
Preference number: 5 (lower is better)
Translates to: PCFLLVLPDPLSHPRNGPDTAGS*GPVSQS
Trigger: GCTCTGGCTCACAGGCCCCAAACTACCAGCCGTATC...AGGACCGTTCCTAGGATGGGACAGTGGGTCAGGCAGGACAAGGAGAAAGCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CAA 90 bp CGAGCTCCAAGCCCTGCTCCTTGCTGCTCTAGGTTGGCCATCAGTTTTCCCTTCTCCCTGCACAGGGTGTaGCTGGGCGTCTTGAAGGTG +
Preference number: 5 (lower is better)
Translates to: RAPSPAPCCSRLAISFPFSLHRV*LGVLKV
Trigger: CACCTTCAAGACGCCCAGCAACACCCTGTGCAGGGA...GAAGGGAAAACTGATGGCCAACCTAGAGCAGCAAGGAGCAGGGCTTGGAGCTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CAA 90 bp CGAGCTCCAAGCCCTGCTCCTTGCTGCTCTAGGTTGGCCATCAGTTTTCCCTTCGTCGGCTGTTGTCCATaGCAGGGAGGGTGTTGCGTC +
Preference number: 5 (lower is better)
Translates to: RAPSPAPCCSRLAISFPFVGCCP*QGGCCV
Trigger: GACGCAACACCCTCCCTGCAATGGACAACAGCCGAC...GAAGGGAAAACTGATGGCCAACCTAGAGCAGCAAGGAGCAGGGCTTGGAGCTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CAA 90 bp GCTTCACATCTGTCTGCTACCTCTGTGCCCGACTTCCACTGCACTGCTCACTGCCGATCAGGTTTGAGGTaGCGGTTGACAGGGGGTGGC +
Preference number: 5 (lower is better)
Translates to: ASHLSATSVPDFHCTAHCRSGLR*RLTGGG
Trigger: GCCACCCCCTGTCAACCGCAACCTCAAACCTGATCG...GCAGTGAGCAGTGCAGTGGAAGTCGGGCACAGAGGTAGCAGACAGATGTGAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CAA 90 bp CCCTGCTTTCTCCTTGTCCTGCCTGACCCACTGTCCCATCCTAGGAACGGTCCTCCCTCTCATCACAGCTaGGCACCCTTGGAAGGCTCT +
Preference number: 5 (lower is better)
Translates to: PCFLLVLPDPLSHPRNGPPSHHS*APLEGS
Trigger: AGAGCCTTCCAAGGGTGCCAAGCTGTGATGAGAGGG...AGGACCGTTCCTAGGATGGGACAGTGGGTCAGGCAGGACAAGGAGAAAGCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CAA 90 bp CCCTGCTTTCTCCTTGTCCTGCCTGACCCACTGTCCCATCCTAGGAACGGTCCTCCATGCACACCACTCTaGCACGTGTCCCTCCTTCAC +
Preference number: 5 (lower is better)
Translates to: PCFLLVLPDPLSHPRNGPPCTPL*HVSLLH
Trigger: GTGAAGGAGGGACACGTGCAAGAGTGGTGTGCATGG...AGGACCGTTCCTAGGATGGGACAGTGGGTCAGGCAGGACAAGGAGAAAGCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CAA 90 bp CTGCTACCTCTGTGCCCGACTTCCACTGCACTGCTCACTGCAAAGAAACTCACTGGTGAAGAAGGCTCCTaGGAGAGCCCCAGGCAGGGG +
Preference number: 5 (lower is better)
Translates to: LLPLCPTSTALLTAKKLTGEEGS*ESPRQG
Trigger: CCCCTGCCTGGGGCTCTCCAAGGAGCCTTCTTCACC...AGTGAGTTTCTTTGCAGTGAGCAGTGCAGTGGAAGTCGGGCACAGAGGTAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CAA 90 bp TTCTGGGGACCCAGACCCCACAGTGTCCTTGTCATCTCCACCACCCGAGCTCCATCCTGCAGCTCCTTCTaGTTAAAGGTCAGGCCTGCA +
Preference number: 5 (lower is better)
Translates to: FWGPRPHSVLVISTTRAPSCSSF*LKVRPA
Trigger: TGCAGGCCTGACCTTTAACAAGAAGGAGCTGCAGGA...TGGAGCTCGGGTGGTGGAGATGACAAGGACACTGTGGGGTCTGGGTCCCCAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CAA 90 bp ACACCTCAGTCGCTCTCCGAAGATTCCAGCCAGGTCCACTCACATCATGGCACAGTCGGCTGTTGTCCATaGCAGGGAGGGTGTTGCGTC +
Preference number: 5 (lower is better)
Translates to: TPQSLSEDSSQVHSHHGTVGCCP*QGGCCV
Trigger: GACGCAACACCCTCCCTGCAATGGACAACAGCCGAC...TGTGCCATGATGTGAGTGGACCTGGCTGGAATCTTCGGAGAGCGACTGAGGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CAA 90 bp GCTTCACATCTGTCTGCTACCTCTGTGCCCGACTTCCACTGCACTGCTCACTGCCCATGCACACCACTCTaGCACGTGTCCCTCCTTCAC +
Preference number: 5 (lower is better)
Translates to: ASHLSATSVPDFHCTAHCPCTPL*HVSLLH
Trigger: GTGAAGGAGGGACACGTGCAAGAGTGGTGTGCATGG...GCAGTGAGCAGTGCAGTGGAAGTCGGGCACAGAGGTAGCAGACAGATGTGAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CAA 90 bp GCTTCACATCTGTCTGCTACCTCTGTGCCCGACTTCCACTGCACTGCTCACTGCTGCCCTGCTTTCTCCTaGTCCTGCCTGACCCACTGT +
Preference number: 5 (lower is better)
Translates to: ASHLSATSVPDFHCTAHCCPAFS*SCLTHC
Trigger: ACAGTGGGTCAGGCAGGACAAGGAGAAAGCAGGGCA...GCAGTGAGCAGTGCAGTGGAAGTCGGGCACAGAGGTAGCAGACAGATGTGAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CAA 90 bp GGGCCTAGAGTGGCCTGTAGCTCCAGAGTTCTGGGGACCCAGACCCCACAGTGTGCTTCCATTCACTTATaGGAACACCAAGGCATGGCC +
Preference number: 5 (lower is better)
Translates to: GPRVACSSRVLGTQTPQCASIHL*EHQGMA
Trigger: GGCCATGCCTTGGTGTTCCAATAAGTGAATGGAAGC...ACACTGTGGGGTCTGGGTCCCCAGAACTCTGGAGCTACAGGCCACTCTAGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CAA 90 bp ACCTCAGTCGCTCTCCGAAGATTCCAGCCAGGTCCACTCACATCATGGCACACTGATACGGCTGGTAGTTaGGGGCCTGTGAGCCAGAGC +
Preference number: 5 (lower is better)
Translates to: TSVALRRFQPGPLTSWHTDTAGS*GPVSQS
Trigger: GCTCTGGCTCACAGGCCCCAAACTACCAGCCGTATC...AGTGTGCCATGATGTGAGTGGACCTGGCTGGAATCTTCGGAGAGCGACTGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CAA 90 bp ATGGGGAAGGAAGAACTCTGGAAATGGGATAGGGGTGCTGGGCCGAGATGTCCCTCGGCAGGTACCCCATaGTGGTCCCAGGTCCTAAAC +
Preference number: 5 (lower is better)
Translates to: MGKEELWKWDRGAGPRCPSAGTP*WSQVLN
Trigger: GTTTAGGACCTGGGACCACAATGGGGTACCTGCCGA...GGGACATCTCGGCCCAGCACCCCTATCCCATTTCCAGAGTTCTTCCTTCCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS TCA 90 bp TGGACAAGGTGGGCTGCATGTGGTTTGACACAGGGGGTTCAAACGTaGACAGAGTTGGCTGGCTGGAGTGTGATGGGGCTGAGGACTTGC +
Preference number: 5 (lower is better)
Translates to: WTRWAACGLTQGVQT*TELAGWSVMGLRTC
Trigger: GCAAGTCCTCAGCCCCATCACACTCCAGCCAGCCAACTCTGTTCACGTTTGAACCCCCTGTGTCAAACCACATGCAGCCCACCTTGTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS TCA 90 bp ATACTCCTGAGGTGCGCTGGTGGACAAGGTGGGCTGCATGTGGTTTaGCACAGGGGGTTCAAACGTGAACAGAGTTGGCTGGCTGGAGTG +
Preference number: 5 (lower is better)
Translates to: ILLRCAGGQGGLHVV*HRGFKREQSWLAGV
Trigger: CACTCCAGCCAGCCAACTCTGTTCACGTTTGAACCCCCTGTGTCAAACCACATGCAGCCCACCTTGTCCACCAGCGCACCTCAGGAGTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS GCA 90 bp CAGGAAAGAGCCAACTCCATCACTCATGGATTCAGCAGACCGGCCTaGACTCTCTCCACCACGCTGTGGGTACTCGTAGGTCTCACAGGA +
Preference number: 5 (lower is better)
Translates to: QERANSITHGFSRPA*TLSTTLWVLVGLTG
Trigger: TCCTGTGAGACCTACGAGTACCCACAGCGTGGTGGAGAGAGTGCAGGCCGGTCTGCTGAATCCATGAGTGATGGAGTTGGCTCTTTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS GCA 90 bp GGCCCCTGGGCTCATTGGGATGTAGACGCTCTGGGAATTATCACCTaGTCGTTCCATGGCCAACAGGGTGGAAGAACCTGGATTCATGGG +
Preference number: 5 (lower is better)
Translates to: GPWAHWDVDALGIIT*SFHGQQGGRTWIHG
Trigger: CCCATGAATCCAGGTTCTTCCACCCTGTTGGCCATGGAACGAGCAGGTGATAATTCCCAGAGCGTCTACATCCCAATGAGCCCAGGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS CCA 90 bp TGCATGTGGTTTGACACAGGGGGTTCAAACGTGAACAGAGTTGGCTaGCTGGAGTGTGATGGGGCTGAGGACTTGCGCTCTCGGAGAAGG +
Preference number: 5 (lower is better)
Translates to: CMWFDTGGSNVNRVG*LECDGAEDLRSRRR
Trigger: CCTTCTCCGAGAGCGCAAGTCCTCAGCCCCATCACACTCCAGCCAGCCAACTCTGTTCACGTTTGAACCCCCTGTGTCAAACCACATGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CAA 90 bp AGAGTGGCCTGTAGCTCCAGAGTTCTGGGGACCCAGACCCCACAGTGTCCTTGTAGAAGCTGGCACTCCTaGCATTTTCTGCTCTTCGGC +
Preference number: 5 (lower is better)
Translates to: RVACSSRVLGTQTPQCPCRSWHS*HFLLFG
Trigger: GCCGAAGAGCAGAAAATGCAAGGAGTGCCAGCTTCT...ACAAGGACACTGTGGGGTCTGGGTCCCCAGAACTCTGGAGCTACAGGCCACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CAA 90 bp TGCTTTCTCCTTGTCCTGCCTGACCCACTGTCCCATCCTAGGAACGGTCCTCATGCCGGAACATCCATATaGTCTACCAGGAGGTCCCCG +
Preference number: 5 (lower is better)
Translates to: CFLLVLPDPLSHPRNGPHAGTSI*STRRSP
Trigger: CGGGGACCTCCTGGTAGACAATATGGATGTTCCGGC...ATGAGGACCGTTCCTAGGATGGGACAGTGGGTCAGGCAGGACAAGGAGAAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CAA 90 bp ACACCAACCTCCCTAAGTACTTCCTCTGCCCTCCATCAGCATTTGAAGTCTCTGGGGCCCCTGGGCTCATaGGGATGTAGACGCTCTGGG +
Preference number: 5 (lower is better)
Translates to: TPTSLSTSSALHQHLKSLGPLGS*GCRRSG
Trigger: CCCAGAGCGTCTACATCCCAATGAGCCCAGGGGCCC...CAGAGACTTCAAATGCTGATGGAGGGCAGAGGAAGTACTTAGGGAGGTTGGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CAA 90 bp TGCTTTCTCCTTGTCCTGCCTGACCCACTGTCCCATCCTAGGAACGGTCCTCATCCCTCTCATCACAGCTaGGCACCCTTGGAAGGCTCT +
Preference number: 5 (lower is better)
Translates to: CFLLVLPDPLSHPRNGPHPSHHS*APLEGS
Trigger: AGAGCCTTCCAAGGGTGCCAAGCTGTGATGAGAGGG...ATGAGGACCGTTCCTAGGATGGGACAGTGGGTCAGGCAGGACAAGGAGAAAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CAA 90 bp GCTTCACATCTGTCTGCTACCTCTGTGCCCGACTTCCACTGCACTGCTCACTGCTTGGTTTGCTGGTCCTaGACTCCCTGGGTTGGTGAG +
Preference number: 5 (lower is better)
Translates to: ASHLSATSVPDFHCTAHCLVCWS*TPWVGE
Trigger: CTCACCAACCCAGGGAGTCAAGGACCAGCAAACCAA...GCAGTGAGCAGTGCAGTGGAAGTCGGGCACAGAGGTAGCAGACAGATGTGAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CAA 90 bp CTGCTACCTCTGTGCCCGACTTCCACTGCACTGCTCACTGCAAAGAAACTCACTGACCCCACAGTGTCCTaGTCATCTCCACCACCCGAG +
Preference number: 5 (lower is better)
Translates to: LLPLCPTSTALLTAKKLTDPTVS*SSPPPE
Trigger: CTCGGGTGGTGGAGATGACAAGGACACTGTGGGGTC...AGTGAGTTTCTTTGCAGTGAGCAGTGCAGTGGAAGTCGGGCACAGAGGTAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CAA 90 bp TGTAGCTACCACCACTGCTTCCATTCACTTATTGGAACACCAAGGCATGGCCCCTCCTGCCCCATGTGCTaGGTCGCCCAGCTTGGTCCA +
Preference number: 5 (lower is better)
Translates to: CSYHHCFHSLIGTPRHGPSCPMC*VAQLGP
Trigger: TGGACCAAGCTGGGCGACCAAGCACATGGGGCAGGA...GGGGCCATGCCTTGGTGTTCCAATAAGTGAATGGAAGCAGTGGTGGTAGCTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CAA 90 bp TCACTTATTGGAACACCAAGGCATGGCCCCTACACTTCTGAGTGGCTGGACCCAATAGTCTGGGCCCACTaGTGGCTGCTGCGGGTACAG +
Preference number: 5 (lower is better)
Translates to: SLIGTPRHGPYTSEWLDPIVWAH*WLLRVQ
Trigger: CTGTACCCGCAGCAGCCACAAGTGGGCCCAGACTAT...TGGGTCCAGCCACTCAGAAGTGTAGGGGCCATGCCTTGGTGTTCCAATAAGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS CCA 90 bp GGCTTATGCACTGGTGCAAGTAGAGATACTCCTGAGGTGCGCTGGTaGACAAGGTGGGCTGCATGTGGTTTGACACAGGGGGTTCAAACG +
Preference number: 5 (lower is better)
Translates to: GLCTGASRDTPEVRW*TRWAACGLTQGVQT
Trigger: CGTTTGAACCCCCTGTGTCAAACCACATGCAGCCCACCTTGTCCACCAGCGCACCTCAGGAGTATCTCTACTTGCACCAGTGCATAAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS CCA 90 bp CCACAATCATTTTCCCTGGCAGGAAAGAGCCAACTCCATCACTCATaGATTCAGCAGACCGGCCTGCACTCTCTCCACCACGCTGTGGGT +
Preference number: 5 (lower is better)
Translates to: PQSFSLAGKSQLHHS*IQQTGLHSLHHAVG
Trigger: ACCCACAGCGTGGTGGAGAGAGTGCAGGCCGGTCTGCTGAATCCATGAGTGATGGAGTTGGCTCTTTCCTGCCAGGGAAAATGATTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CAA 90 bp CCCTGCTTTCTCCTTGTCCTGCCTGACCCACTGTCCCATCCTAGGAACGGTCCTTCACAGAAGTTCAGGTaGATGATCCGCAGAGGCTTC +
Preference number: 5 (lower is better)
Translates to: PCFLLVLPDPLSHPRNGPSQKFR*MIRRGF
Trigger: GAAGCCTCTGCGGATCATCAACCTGAACTTCTGTGA...AGGACCGTTCCTAGGATGGGACAGTGGGTCAGGCAGGACAAGGAGAAAGCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CAA 90 bp ACACCTCAGTCGCTCTCCGAAGATTCCAGCCAGGTCCACTCACATCATGGCACAGCTTTCCGATCAGGTTaGAGGTTGCGGTTGACAGGG +
Preference number: 5 (lower is better)
Translates to: TPQSLSEDSSQVHSHHGTAFRSG*RLRLTG
Trigger: CCCTGTCAACCGCAACCTCAAACCTGATCGGAAAGC...TGTGCCATGATGTGAGTGGACCTGGCTGGAATCTTCGGAGAGCGACTGAGGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CAA 90 bp AGAGTGGCCTGTAGCTCCAGAGTTCTGGGGACCCAGACCCCACAGTGTCCTTGTTCAGGTCAAGTGGTGTaGGCTTTGCTTTCCGATCAG +
Preference number: 5 (lower is better)
Translates to: RVACSSRVLGTQTPQCPCSGQVV*ALLSDQ
Trigger: CTGATCGGAAAGCAAAGCCAACACCACTTGACCTGA...ACAAGGACACTGTGGGGTCTGGGTCCCCAGAACTCTGGAGCTACAGGCCACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CAA 90 bp GGGCCTAGAGTGGCCTGTAGCTCCAGAGTTCTGGGGACCCAGACCCCACAGTGTAGTCCATTATCCACTTaGGTTTGCTGGTCCTTGACT +
Preference number: 5 (lower is better)
Translates to: GPRVACSSRVLGTQTPQCSPLST*VCWSLT
Trigger: AGTCAAGGACCAGCAAACCAAAGTGGATAATGGACT...ACACTGTGGGGTCTGGGTCCCCAGAACTCTGGAGCTACAGGCCACTCTAGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CAA 90 bp TTTGTCCTTCATCTTCTGCCTCTGCACCCCACAGCAGCTGTCCTGCCATGGCCTCCTTGCTGCTCTAGGTaGGCCATCAGTTTTCCCTTC +
Preference number: 5 (lower is better)
Translates to: FVLHLLPLHPTAAVLPWPPCCSR*AISFPF
Trigger: GAAGGGAAAACTGATGGCCAACCTAGAGCAGCAAGG...AGGCCATGGCAGGACAGCTGCTGTGGGGTGCAGAGGCAGAAGATGAAGGACAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CAA 90 bp ACACCAACCTCCCTAAGTACTTCCTCTGCCCTCCATCAGCATTTGAAGTCTCTGGCTTGGTCGCCCAGCTaGGTCCAAGCCTTCCCCTGT +
Preference number: 5 (lower is better)
Translates to: TPTSLSTSSALHQHLKSLAWSPS*VQAFPC
Trigger: ACAGGGGAAGGCTTGGACCAAGCTGGGCGACCAAGC...CAGAGACTTCAAATGCTGATGGAGGGCAGAGGAAGTACTTAGGGAGGTTGGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CAA 90 bp TTCTGGGGACCCAGACCCCACAGTGTCCTTGTCATCTCCACCACCCGAGCTCCACATGGCAGGAAGTCATaGTTTGGGAGGAAGAAGTTC +
Preference number: 5 (lower is better)
Translates to: FWGPRPHSVLVISTTRAPHGRKS*FGRKKF
Trigger: GAACTTCTTCCTCCCAAACAATGACTTCCTGCCATG...TGGAGCTCGGGTGGTGGAGATGACAAGGACACTGTGGGGTCTGGGTCCCCAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CAA 90 bp AGAGTGGCCTGTAGCTCCAGAGTTCTGGGGACCCAGACCCCACAGTGTCCTTGTTGCACCCGAGGGATTTaGGTAGTTACCAGAATAGGG +
Preference number: 5 (lower is better)
Translates to: RVACSSRVLGTQTPQCPCCTRGI*VVTRIG
Trigger: CCCTATTCTGGTAACTACCAAAATCCCTCGGGTGCA...ACAAGGACACTGTGGGGTCTGGGTCCCCAGAACTCTGGAGCTACAGGCCACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS CCA 90 bp TTCGGCTTATGCACTGGTGCAAGTAGAGATACTCCTGAGGTGCGCTaGTGGACAAGGTGGGCTGCATGTGGTTTGACACAGGGGGTTCAA +
Preference number: 5 (lower is better)
Translates to: FGLCTGASRDTPEVR*WTRWAACGLTQGVQ
Trigger: TTGAACCCCCTGTGTCAAACCACATGCAGCCCACCTTGTCCACCAGCGCACCTCAGGAGTATCTCTACTTGCACCAGTGCATAAGCCGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS CCA 90 bp CACCTGCTCGTTCCATGGCCAACAGGGTGGAAGAACCTGGATTCATaGGCACATAGTTGTCTTCAGAATTGGTGCTGTCCGATCGGCCCA +
Preference number: 5 (lower is better)
Translates to: HLLVPWPTGWKNLDS*AHSCLQNWCCPIGP
Trigger: TGGGCCGATCGGACAGCACCAATTCTGAAGACAACTATGTGCCCATGAATCCAGGTTCTTCCACCCTGTTGGCCATGGAACGAGCAGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CAA 90 bp TTTGTCCTTCATCTTCTGCCTCTGCACCCCACAGCAGCTGTCCTGCCATGGCCTTTGCTAGCCTCGCCTTaGTCTCAGTTACTCCTCTCT +
Preference number: 5 (lower is better)
Translates to: FVLHLLPLHPTAAVLPWPLLASP*SQLLLS
Trigger: AGAGAGGAGTAACTGAGACAAAGGCGAGGCTAGCAA...AGGCCATGGCAGGACAGCTGCTGTGGGGTGCAGAGGCAGAAGATGAAGGACAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340149.6
CDS-3UTR CAA 90 bp TGTATTTCCCCACTTGCTACATGGCCTTCACCACTGCTTCACATCTGTCTGCTAGATGGGGCTGAGGACTaGCGCTCTCGGAGAAGGTGC +
Preference number: 5 (lower is better)
Translates to: CISPLATWPSPLLHICLLDGAED*RSRRRC
Trigger: GCACCTTCTCCGAGAGCGCAAGTCCTCAGCCCCATC...TAGCAGACAGATGTGAAGCAGTGGTGAAGGCCATGTAGCAAGTGGGGAAATACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CAA 90 bp ACACCTCAGTCGCTCTCCGAAGATTCCAGCCAGGTCCACTCACATCATGGCACAGCCCTGGGCAAGTTTTaGTACAGCTGTGTCACTCCT +
Preference number: 5 (lower is better)
Translates to: TPQSLSEDSSQVHSHHGTALGKF*YSCVTP
Trigger: AGGAGTGACACAGCTGTACAAAAACTTGCCCAGGGC...TGTGCCATGATGTGAGTGGACCTGGCTGGAATCTTCGGAGAGCGACTGAGGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CAA 90 bp CGAGCTCCAAGCCCTGCTCCTTGCTGCTCTAGGTTGGCCATCAGTTTTCCCTTCATAGAAGCCATGGACTaGACCACTGATCCCGTTGAC +
Preference number: 5 (lower is better)
Translates to: RAPSPAPCCSRLAISFPFIEAMD*TTDPVD
Trigger: GTCAACGGGATCAGTGGTCAAGTCCATGGCTTCTAT...GAAGGGAAAACTGATGGCCAACCTAGAGCAGCAAGGAGCAGGGCTTGGAGCTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CAA 90 bp ACCTCAGTCGCTCTCCGAAGATTCCAGCCAGGTCCACTCACATCATGGCACACTGTGTTGCTGGGCGTCTaGAAGGTGTACACATCCTCA +
Preference number: 5 (lower is better)
Translates to: TSVALRRFQPGPLTSWHTVLLGV*KVYTSS
Trigger: TGAGGATGTGTACACCTTCAAGACGCCCAGCAACAC...AGTGTGCCATGATGTGAGTGGACCTGGCTGGAATCTTCGGAGAGCGACTGAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CAA 90 bp GTATTTCCCCACTTGCTACATGGCCTTCACCACTGCTTCACATCTGTCTGCTACCGATCAGGTTTGAGGTaGCGGTTGACAGGGGGTGGC +
Preference number: 5 (lower is better)
Translates to: VFPHLLHGLHHCFTSVCYRSGLR*RLTGGG
Trigger: GCCACCCCCTGTCAACCGCAACCTCAAACCTGATCG...GTAGCAGACAGATGTGAAGCAGTGGTGAAGGCCATGTAGCAAGTGGGGAAATAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CAA 90 bp CTGCTACCTCTGTGCCCGACTTCCACTGCACTGCTCACTGCAAAGAAACTCACTGCTTTCCGATCAGGTTaGAGGTTGCGGTTGACAGGG +
Preference number: 5 (lower is better)
Translates to: LLPLCPTSTALLTAKKLTAFRSG*RLRLTG
Trigger: CCCTGTCAACCGCAACCTCAAACCTGATCGGAAAGC...AGTGAGTTTCTTTGCAGTGAGCAGTGCAGTGGAAGTCGGGCACAGAGGTAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CAA 90 bp GCTTCACATCTGTCTGCTACCTCTGTGCCCGACTTCCACTGCACTGCTCACTGCTCATCGATGACGGTGTaGTTCCTCAGGTCAAGTGGT +
Preference number: 5 (lower is better)
Translates to: ASHLSATSVPDFHCTAHCSSMTV*FLRSSG
Trigger: ACCACTTGACCTGAGGAACAACACCGTCATCGATGA...GCAGTGAGCAGTGCAGTGGAAGTCGGGCACAGAGGTAGCAGACAGATGTGAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CAA 90 bp TTTGTCCTTCATCTTCTGCCTCTGCACCCCACAGCAGCTGTCCTGCCATGGCCTGCCCTAGACCAAGACTaGGTGATAGGTGACTTGAAG +
Preference number: 5 (lower is better)
Translates to: FVLHLLPLHPTAAVLPWPALDQD*VIGDLK
Trigger: CTTCAAGTCACCTATCACCAAGTCTTGGTCTAGGGC...AGGCCATGGCAGGACAGCTGCTGTGGGGTGCAGAGGCAGAAGATGAAGGACAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CAA 90 bp ACACCAACCTCCCTAAGTACTTCCTCTGCCCTCCATCAGCATTTGAAGTCTCTGGATGAAGTAGATGGCTaGCGGTGGGGGCTTGGGGAG +
Preference number: 5 (lower is better)
Translates to: TPTSLSTSSALHQHLKSLDEVDG*RWGLGE
Trigger: CTCCCCAAGCCCCCACCGCAAGCCATCTACTTCATC...CAGAGACTTCAAATGCTGATGGAGGGCAGAGGAAGTACTTAGGGAGGTTGGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CAA 90 bp ATGGGGAAGGAAGAACTCTGGAAATGGGATAGGGGTGCTGGGCCGAGATGTCCCCTGATGTCAAGTGCTTaGAAGGCTGAGACTGGCAGA +
Preference number: 5 (lower is better)
Translates to: MGKEELWKWDRGAGPRCPLMSSA*KAETGR
Trigger: TCTGCCAGTCTCAGCCTTCAAAGCACTTGACATCAG...GGGACATCTCGGCCCAGCACCCCTATCCCATTTCCAGAGTTCTTCCTTCCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CAA 90 bp CTGTCCCATCCTAGGAACGGTCCTCATGTCACACCACCATGCACACCACTCTTGCCTGGGAGATTCGATTaGAACACCTCAGTCGCTCTC +
Preference number: 5 (lower is better)
Translates to: LSHPRNGPHVTPPCTPLLPGRFD*NTSVAL
Trigger: GAGAGCGACTGAGGTGTTCAAATCGAATCTCCCAGG...CAAGAGTGGTGTGCATGGTGGTGTGACATGAGGACCGTTCCTAGGATGGGACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CAA 90 bp TTCTGGGGACCCAGACCCCACAGTGTCCTTGTCATCTCCACCACCCGAGCTCCAAGAATGGTTGTGCTTTaGTCACAGGAATGGGGCATA +
Preference number: 5 (lower is better)
Translates to: FWGPRPHSVLVISTTRAPRMVVL*SQEWGI
Trigger: TATGCCCCATTCCTGTGACAAAAGCACAACCATTCT...TGGAGCTCGGGTGGTGGAGATGACAAGGACACTGTGGGGTCTGGGTCCCCAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS GCA 90 bp CCTGAGAGAAGCTGGCACTCCTTGCATTTTCTGCTCTTCGGCTTATaGACTGGTGCAAGTAGAGATACTCCTGAGGTGCGCTGGTGGACA +
Preference number: 5 (lower is better)
Translates to: PERSWHSLHFLLFGL*TGASRDTPEVRWWT
Trigger: TGTCCACCAGCGCACCTCAGGAGTATCTCTACTTGCACCAGTGCATAAGCCGAAGAGCAGAAAATGCAAGGAGTGCCAGCTTCTCTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CAA 90 bp GCTTCACATCTGTCTGCTACCTCTGTGCCCGACTTCCACTGCACTGCTCACTGCTCACTTGTCTCTCTATaGCTAGCCTCGCCTTTGTCT +
Preference number: 5 (lower is better)
Translates to: ASHLSATSVPDFHCTAHCSLVSL*LASPLS
Trigger: AGACAAAGGCGAGGCTAGCAATAGAGAGACAAGTGA...GCAGTGAGCAGTGCAGTGGAAGTCGGGCACAGAGGTAGCAGACAGATGTGAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340149.6
CDS-3UTR CAA 90 bp ACCTCAGTCGCTCTCCGAAGATTCCAGCCAGGTCCACTCACATCATGGCACACTTCACAGAAGTTCAGGTaGATGATCCGCAGAGGCTTC +
Preference number: 5 (lower is better)
Translates to: TSVALRRFQPGPLTSWHTSQKFR*MIRRGF
Trigger: GAAGCCTCTGCGGATCATCAACCTGAACTTCTGTGA...AGTGTGCCATGATGTGAGTGGACCTGGCTGGAATCTTCGGAGAGCGACTGAGGT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CAA 90 bp TCACTTATTGGAACACCAAGGCATGGCCCCTACACTTCTGAGTGGCTGGACCCAAGAAGCTGGCACTCCTaGCATTTTCTGCTCTTCGGC +
Preference number: 5 (lower is better)
Translates to: SLIGTPRHGPYTSEWLDPRSWHS*HFLLFG
Trigger: GCCGAAGAGCAGAAAATGCAAGGAGTGCCAGCTTCT...TGGGTCCAGCCACTCAGAAGTGTAGGGGCCATGCCTTGGTGTTCCAATAAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CAA 90 bp GCTTCACATCTGTCTGCTACCTCTGTGCCCGACTTCCACTGCACTGCTCACTGCTTGACACAGTGTCCATaGCCCTGGGCAAGTTTTTGT +
Preference number: 5 (lower is better)
Translates to: ASHLSATSVPDFHCTAHCLTQCP*PWASFC
Trigger: ACAAAAACTTGCCCAGGGCAATGGACACTGTGTCAA...GCAGTGAGCAGTGCAGTGGAAGTCGGGCACAGAGGTAGCAGACAGATGTGAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CAA 90 bp TTTGTCCTTCATCTTCTGCCTCTGCACCCCACAGCAGCTGTCCTGCCATGGCCTTTGACACAGTGTCCATaGCCCTGGGCAAGTTTTTGT +
Preference number: 5 (lower is better)
Translates to: FVLHLLPLHPTAAVLPWPLTQCP*PWASFC
Trigger: ACAAAAACTTGCCCAGGGCAATGGACACTGTGTCAA...AGGCCATGGCAGGACAGCTGCTGTGGGGTGCAGAGGCAGAAGATGAAGGACAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CAA 90 bp GTATTTCCCCACTTGCTACATGGCCTTCACCACTGCTTCACATCTGTCTGCTACGCCGGAACATCCATATaGTCTACCAGGAGGTCCCCG +
Preference number: 5 (lower is better)
Translates to: VFPHLLHGLHHCFTSVCYAGTSI*STRRSP
Trigger: CGGGGACCTCCTGGTAGACAATATGGATGTTCCGGC...GTAGCAGACAGATGTGAAGCAGTGGTGAAGGCCATGTAGCAAGTGGGGAAATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CAA 90 bp TCACTTATTGGAACACCAAGGCATGGCCCCTACACTTCTGAGTGGCTGGACCCAGCACAGGAAGGGTTGTaGATGGGTAGCCAAGTGAGT +
Preference number: 5 (lower is better)
Translates to: SLIGTPRHGPYTSEWLDPAQEGL*MGSQVS
Trigger: ACTCACTTGGCTACCCATCAACAACCCTTCCTGTGC...TGGGTCCAGCCACTCAGAAGTGTAGGGGCCATGCCTTGGTGTTCCAATAAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CAA 90 bp TGCTTTCTCCTTGTCCTGCCTGACCCACTGTCCCATCCTAGGAACGGTCCTCATTCATCGATGACGGTGTaGTTCCTCAGGTCAAGTGGT +
Preference number: 5 (lower is better)
Translates to: CFLLVLPDPLSHPRNGPHSSMTV*FLRSSG
Trigger: ACCACTTGACCTGAGGAACAACACCGTCATCGATGA...ATGAGGACCGTTCCTAGGATGGGACAGTGGGTCAGGCAGGACAAGGAGAAAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CAA 90 bp ACCTCAGTCGCTCTCCGAAGATTCCAGCCAGGTCCACTCACATCATGGCACACTGCCCTAGACCAAGACTaGGTGATAGGTGACTTGAAG +
Preference number: 5 (lower is better)
Translates to: TSVALRRFQPGPLTSWHTALDQD*VIGDLK
Trigger: CTTCAAGTCACCTATCACCAAGTCTTGGTCTAGGGC...AGTGTGCCATGATGTGAGTGGACCTGGCTGGAATCTTCGGAGAGCGACTGAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CAA 90 bp CTGTCCCATCCTAGGAACGGTCCTCATGTCACACCACCATGCACACCACTCTTGCCTCTTTTAGTGGCCTaGCTTCTCTCCTGCCAAGAA +
Preference number: 5 (lower is better)
Translates to: LSHPRNGPHVTPPCTPLLPLLVA*LLSCQE
Trigger: TTCTTGGCAGGAGAGAAGCAAGGCCACTAAAAGAGG...CAAGAGTGGTGTGCATGGTGGTGTGACATGAGGACCGTTCCTAGGATGGGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CAA 90 bp ACACCTCAGTCGCTCTCCGAAGATTCCAGCCAGGTCCACTCACATCATGGCACACCTCTTTTAGTGGCCTaGCTTCTCTCCTGCCAAGAA +
Preference number: 5 (lower is better)
Translates to: TPQSLSEDSSQVHSHHGTPLLVA*LLSCQE
Trigger: TTCTTGGCAGGAGAGAAGCAAGGCCACTAAAAGAGG...TGTGCCATGATGTGAGTGGACCTGGCTGGAATCTTCGGAGAGCGACTGAGGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CAA 90 bp ACCTCAGTCGCTCTCCGAAGATTCCAGCCAGGTCCACTCACATCATGGCACACTGATGTATTTCCCCACTaGCTACATGGCCTTCACCAC +
Preference number: 5 (lower is better)
Translates to: TSVALRRFQPGPLTSWHTDVFPH*LHGLHH
Trigger: GTGGTGAAGGCCATGTAGCAAGTGGGGAAATACATC...AGTGTGCCATGATGTGAGTGGACCTGGCTGGAATCTTCGGAGAGCGACTGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CAA 90 bp TCACTTATTGGAACACCAAGGCATGGCCCCTACACTTCTGAGTGGCTGGACCCAGCCCTCCATCAGCATTaGAAGTCTCTGTCTGATGGC +
Preference number: 5 (lower is better)
Translates to: SLIGTPRHGPYTSEWLDPALHQH*KSLSDG
Trigger: GCCATCAGACAGAGACTTCAAATGCTGATGGAGGGC...TGGGTCCAGCCACTCAGAAGTGTAGGGGCCATGCCTTGGTGTTCCAATAAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CAA 90 bp CGAGCTCCAAGCCCTGCTCCTTGCTGCTCTAGGTTGGCCATCAGTTTTCCCTTCATGCTCAAAGGCCTTTaGTTCCCAAGACACAAGGCT +
Preference number: 5 (lower is better)
Translates to: RAPSPAPCCSRLAISFPFMLKGL*FPRHKA
Trigger: AGCCTTGTGTCTTGGGAACAAAAGGCCTTTGAGCAT...GAAGGGAAAACTGATGGCCAACCTAGAGCAGCAAGGAGCAGGGCTTGGAGCTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CAA 90 bp ACCTCAGTCGCTCTCCGAAGATTCCAGCCAGGTCCACTCACATCATGGCACACTACTGAGTTGACTCCTTaGTTGGAGGAGGTAGTGGGT +
Preference number: 5 (lower is better)
Translates to: TSVALRRFQPGPLTSWHTTELTP*LEEVVG
Trigger: ACCCACTACCTCCTCCAACAAAGGAGTCAACTCAGT...AGTGTGCCATGATGTGAGTGGACCTGGCTGGAATCTTCGGAGAGCGACTGAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CAA 90 bp AGCTTTCCCTCTTCATCTGGGCATCTAAGTCCTTTACCCCTCAAGACCACTGCTTCGGCAGGTACCCCATaGTGGTCCCAGGTCCTAAAC +
Preference number: 5 (lower is better)
Translates to: SFPSSSGHLSPLPLKTTASAGTP*WSQVLN
Trigger: GTTTAGGACCTGGGACCACAATGGGGTACCTGCCGA...AGCAGTGGTCTTGAGGGGTAAAGGACTTAGATGCCCAGATGAAGAGGGAAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CAA 90 bp GCCTCTGACACCAACCTCCCTAAGTACTTCCTCTGCCCTCCATCAGCATTTGAAGCCCTGGGCAAGTTTTaGTACAGCTGTGTCACTCCT +
Preference number: 5 (lower is better)
Translates to: ASDTNLPKYFLCPPSAFEALGKF*YSCVTP
Trigger: AGGAGTGACACAGCTGTACAAAAACTTGCCCAGGGC...TTCAAATGCTGATGGAGGGCAGAGGAAGTACTTAGGGAGGTTGGTGTCAGAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CAA 90 bp CTGCTACCTCTGTGCCCGACTTCCACTGCACTGCTCACTGCAAAGAAACTCACTATAGAAGCCATGGACTaGACCACTGATCCCGTTGAC +
Preference number: 5 (lower is better)
Translates to: LLPLCPTSTALLTAKKLTIEAMD*TTDPVD
Trigger: GTCAACGGGATCAGTGGTCAAGTCCATGGCTTCTAT...AGTGAGTTTCTTTGCAGTGAGCAGTGCAGTGGAAGTCGGGCACAGAGGTAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CAA 90 bp GCCTCTGACACCAACCTCCCTAAGTACTTCCTCTGCCCTCCATCAGCATTTGAAGTGTTGCTGGGCGTCTaGAAGGTGTACACATCCTCA +
Preference number: 5 (lower is better)
Translates to: ASDTNLPKYFLCPPSAFEVLLGV*KVYTSS
Trigger: TGAGGATGTGTACACCTTCAAGACGCCCAGCAACAC...TTCAAATGCTGATGGAGGGCAGAGGAAGTACTTAGGGAGGTTGGTGTCAGAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CAA 90 bp CTGCTACCTCTGTGCCCGACTTCCACTGCACTGCTCACTGCAAAGAAACTCACTTCAGGTCAAGTGGTGTaGGCTTTGCTTTCCGATCAG +
Preference number: 5 (lower is better)
Translates to: LLPLCPTSTALLTAKKLTSGQVV*ALLSDQ
Trigger: CTGATCGGAAAGCAAAGCCAACACCACTTGACCTGA...AGTGAGTTTCTTTGCAGTGAGCAGTGCAGTGGAAGTCGGGCACAGAGGTAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CAA 90 bp ACACCTCAGTCGCTCTCCGAAGATTCCAGCCAGGTCCACTCACATCATGGCACATTGGTGATAGGTGACTaGAAGGGGAGTTCATCGATG +
Preference number: 5 (lower is better)
Translates to: TPQSLSEDSSQVHSHHGTLVIGD*KGSSSM
Trigger: CATCGATGAACTCCCCTTCAAGTCACCTATCACCAA...TGTGCCATGATGTGAGTGGACCTGGCTGGAATCTTCGGAGAGCGACTGAGGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CAA 90 bp TGTAGCTACCACCACTGCTTCCATTCACTTATTGGAACACCAAGGCATGGCCCCGAGTTGAAGGTGTGGTaGGCCCTAGACCAAGACTTG +
Preference number: 5 (lower is better)
Translates to: CSYHHCFHSLIGTPRHGPELKVW*ALDQDL
Trigger: CAAGTCTTGGTCTAGGGCCAACCACACCTTCAACTC...GGGGCCATGCCTTGGTGTTCCAATAAGTGAATGGAAGCAGTGGTGGTAGCTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CAA 90 bp TGCTTTCTCCTTGTCCTGCCTGACCCACTGTCCCATCCTAGGAACGGTCCTCATCATGGCAGGAAGTCATaGTTTGGGAGGAAGAAGTTC +
Preference number: 5 (lower is better)
Translates to: CFLLVLPDPLSHPRNGPHHGRKS*FGRKKF
Trigger: GAACTTCTTCCTCCCAAACAATGACTTCCTGCCATG...ATGAGGACCGTTCCTAGGATGGGACAGTGGGTCAGGCAGGACAAGGAGAAAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CAA 90 bp CTGCTACCTCTGTGCCCGACTTCCACTGCACTGCTCACTGCAAAGAAACTCACTTGCACCCGAGGGATTTaGGTAGTTACCAGAATAGGG +
Preference number: 5 (lower is better)
Translates to: LLPLCPTSTALLTAKKLTCTRGI*VVTRIG
Trigger: CCCTATTCTGGTAACTACCAAAATCCCTCGGGTGCA...AGTGAGTTTCTTTGCAGTGAGCAGTGCAGTGGAAGTCGGGCACAGAGGTAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CAA 90 bp ACACCTCAGTCGCTCTCCGAAGATTCCAGCCAGGTCCACTCACATCATGGCACATCACTTGACTTAACCTaGCAGAAGTGGAGCTGGAAG +
Preference number: 5 (lower is better)
Translates to: TPQSLSEDSSQVHSHHGTSLDLT*QKWSWK
Trigger: CTTCCAGCTCCACTTCTGCAAGGTTAAGTCAAGTGA...TGTGCCATGATGTGAGTGGACCTGGCTGGAATCTTCGGAGAGCGACTGAGGTGT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CAA 90 bp ACACCTCAGTCGCTCTCCGAAGATTCCAGCCAGGTCCACTCACATCATGGCACAAAAAACATGACCCACTaGAACACACTCCTGTCCCAC +
Preference number: 5 (lower is better)
Translates to: TPQSLSEDSSQVHSHHGTKNMTH*NTLLSH
Trigger: GTGGGACAGGAGTGTGTTCAAGTGGGTCATGTTTTT...TGTGCCATGATGTGAGTGGACCTGGCTGGAATCTTCGGAGAGCGACTGAGGTGT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CAA 90 bp GCCTCTGACACCAACCTCCCTAAGTACTTCCTCTGCCCTCCATCAGCATTTGAAGATGTATTTCCCCACTaGCTACATGGCCTTCACCAC +
Preference number: 5 (lower is better)
Translates to: ASDTNLPKYFLCPPSAFEDVFPH*LHGLHH
Trigger: GTGGTGAAGGCCATGTAGCAAGTGGGGAAATACATC...TTCAAATGCTGATGGAGGGCAGAGGAAGTACTTAGGGAGGTTGGTGTCAGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CAA 90 bp CTGTCCCATCCTAGGAACGGTCCTCATGTCACACCACCATGCACACCACTCTTGGTCTGGTCTGTCCTGTaGCTTCTGAAACTCTTGAAA +
Preference number: 5 (lower is better)
Translates to: LSHPRNGPHVTPPCTPLLVWSVL*LLKLLK
Trigger: TTTCAAGAGTTTCAGAAGCAACAGGACAGACCAGAC...CAAGAGTGGTGTGCATGGTGGTGTGACATGAGGACCGTTCCTAGGATGGGACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CAA 90 bp ACACCAACCTCCCTAAGTACTTCCTCTGCCCTCCATCAGCATTTGAAGTCTCTGCCTGGGAGATTCGATTaGAACACCTCAGTCGCTCTC +
Preference number: 5 (lower is better)
Translates to: TPTSLSTSSALHQHLKSLPGRFD*NTSVAL
Trigger: GAGAGCGACTGAGGTGTTCAAATCGAATCTCCCAGG...CAGAGACTTCAAATGCTGATGGAGGGCAGAGGAAGTACTTAGGGAGGTTGGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CAA 90 bp ACACCAACCTCCCTAAGTACTTCCTCTGCCCTCCATCAGCATTTGAAGTCTCTGTCTCTACCCCTACACTaGCACCCGAGGGATTTTGGT +
Preference number: 5 (lower is better)
Translates to: TPTSLSTSSALHQHLKSLSLPLH*HPRDFG
Trigger: ACCAAAATCCCTCGGGTGCAAGTGTAGGGGTAGAGA...CAGAGACTTCAAATGCTGATGGAGGGCAGAGGAAGTACTTAGGGAGGTTGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CAA 90 bp GTATTTCCCCACTTGCTACATGGCCTTCACCACTGCTTCACATCTGTCTGCTACTCTCTACCCCTACACTaGCACCCGAGGGATTTTGGT +
Preference number: 5 (lower is better)
Translates to: VFPHLLHGLHHCFTSVCYSLPLH*HPRDFG
Trigger: ACCAAAATCCCTCGGGTGCAAGTGTAGGGGTAGAGA...GTAGCAGACAGATGTGAAGCAGTGGTGAAGGCCATGTAGCAAGTGGGGAAATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CAA 90 bp TCACTTATTGGAACACCAAGGCATGGCCCCTACACTTCTGAGTGGCTGGACCCATCACTTGACTTAACCTaGCAGAAGTGGAGCTGGAAG +
Preference number: 5 (lower is better)
Translates to: SLIGTPRHGPYTSEWLDPSLDLT*QKWSWK
Trigger: CTTCCAGCTCCACTTCTGCAAGGTTAAGTCAAGTGA...TGGGTCCAGCCACTCAGAAGTGTAGGGGCCATGCCTTGGTGTTCCAATAAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CAA 90 bp ACACCAACCTCCCTAAGTACTTCCTCTGCCCTCCATCAGCATTTGAAGTCTCTGCTGATGTCAAGTGCTTaGAAGGCTGAGACTGGCAGA +
Preference number: 5 (lower is better)
Translates to: TPTSLSTSSALHQHLKSLLMSSA*KAETGR
Trigger: TCTGCCAGTCTCAGCCTTCAAAGCACTTGACATCAG...CAGAGACTTCAAATGCTGATGGAGGGCAGAGGAAGTACTTAGGGAGGTTGGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CAA 90 bp TGTATTTCCCCACTTGCTACATGGCCTTCACCACTGCTTCACATCTGTCTGCTACCTTGCTGCTCTAGGTaGGCCATCAGTTTTCCCTTC +
Preference number: 5 (lower is better)
Translates to: CISPLATWPSPLLHICLLPCCSR*AISFPF
Trigger: GAAGGGAAAACTGATGGCCAACCTAGAGCAGCAAGG...TAGCAGACAGATGTGAAGCAGTGGTGAAGGCCATGTAGCAAGTGGGGAAATACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CAA 90 bp AGCTTTCCCTCTTCATCTGGGCATCTAAGTCCTTTACCCCTCAAGACCACTGCTGCTTCCATTCACTTATaGGAACACCAAGGCATGGCC +
Preference number: 5 (lower is better)
Translates to: SFPSSSGHLSPLPLKTTAASIHL*EHQGMA
Trigger: GGCCATGCCTTGGTGTTCCAATAAGTGAATGGAAGC...AGCAGTGGTCTTGAGGGGTAAAGGACTTAGATGCCCAGATGAAGAGGGAAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CAA 90 bp AGCTTTCCCTCTTCATCTGGGCATCTAAGTCCTTTACCCCTCAAGACCACTGCTACTGAGTTGACTCCTTaGTTGGAGGAGGTAGTGGGT +
Preference number: 5 (lower is better)
Translates to: SFPSSSGHLSPLPLKTTATELTP*LEEVVG
Trigger: ACCCACTACCTCCTCCAACAAAGGAGTCAACTCAGT...AGCAGTGGTCTTGAGGGGTAAAGGACTTAGATGCCCAGATGAAGAGGGAAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CAA 90 bp GCCTCTGACACCAACCTCCCTAAGTACTTCCTCTGCCCTCCATCAGCATTTGAAAAAAACATGACCCACTaGAACACACTCCTGTCCCAC +
Preference number: 5 (lower is better)
Translates to: ASDTNLPKYFLCPPSAFEKNMTH*NTLLSH
Trigger: GTGGGACAGGAGTGTGTTCAAGTGGGTCATGTTTTT...TTCAAATGCTGATGGAGGGCAGAGGAAGTACTTAGGGAGGTTGGTGTCAGAGGC
50% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CAA 90 bp GTATTTCCCCACTTGCTACATGGCCTTCACCACTGCTTCACATCTGTCTGCTACTTGGTGATAGGTGACTaGAAGGGGAGTTCATCGATG +
Preference number: 5 (lower is better)
Translates to: VFPHLLHGLHHCFTSVCYLVIGD*KGSSSM
Trigger: CATCGATGAACTCCCCTTCAAGTCACCTATCACCAA...GTAGCAGACAGATGTGAAGCAGTGGTGAAGGCCATGTAGCAAGTGGGGAAATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CAA 90 bp GTATTTCCCCACTTGCTACATGGCCTTCACCACTGCTTCACATCTGTCTGCTACATTATCCACTTTGGTTaGCTGGTCCTTGACTCCCTG +
Preference number: 5 (lower is better)
Translates to: VFPHLLHGLHHCFTSVCYIIHFG*LVLDSL
Trigger: CAGGGAGTCAAGGACCAGCAAACCAAAGTGGATAAT...GTAGCAGACAGATGTGAAGCAGTGGTGAAGGCCATGTAGCAAGTGGGGAAATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CAA 90 bp ACACCAACCTCCCTAAGTACTTCCTCTGCCCTCCATCAGCATTTGAAGTCTCTGATGCTCAAAGGCCTTTaGTTCCCAAGACACAAGGCT +
Preference number: 5 (lower is better)
Translates to: TPTSLSTSSALHQHLKSLMLKGL*FPRHKA
Trigger: AGCCTTGTGTCTTGGGAACAAAAGGCCTTTGAGCAT...CAGAGACTTCAAATGCTGATGGAGGGCAGAGGAAGTACTTAGGGAGGTTGGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CAA 90 bp TGTATTTCCCCACTTGCTACATGGCCTTCACCACTGCTTCACATCTGTCTGCTAATTATCCACTTTGGTTaGCTGGTCCTTGACTCCCTG +
Preference number: 5 (lower is better)
Translates to: CISPLATWPSPLLHICLLIIHFG*LVLDSL
Trigger: CAGGGAGTCAAGGACCAGCAAACCAAAGTGGATAAT...TAGCAGACAGATGTGAAGCAGTGGTGAAGGCCATGTAGCAAGTGGGGAAATACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CAA 90 bp ACACCAACCTCCCTAAGTACTTCCTCTGCCCTCCATCAGCATTTGAAGTCTCTGGTCTGGTCTGTCCTGTaGCTTCTGAAACTCTTGAAA +
Preference number: 5 (lower is better)
Translates to: TPTSLSTSSALHQHLKSLVWSVL*LLKLLK
Trigger: TTTCAAGAGTTTCAGAAGCAACAGGACAGACCAGAC...CAGAGACTTCAAATGCTGATGGAGGGCAGAGGAAGTACTTAGGGAGGTTGGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CAA 90 bp GCCTCTGACACCAACCTCCCTAAGTACTTCCTCTGCCCTCCATCAGCATTTGAAGGAATGGGGCATACTTaGTTAACTTCTACATTGGAA +
Preference number: 5 (lower is better)
Translates to: ASDTNLPKYFLCPPSAFEGMGHT*LTSTLE
Trigger: TTCCAATGTAGAAGTTAACAAAGTATGCCCCATTCC...TTCAAATGCTGATGGAGGGCAGAGGAAGTACTTAGGGAGGTTGGTGTCAGAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CAA 90 bp TGTATTTCCCCACTTGCTACATGGCCTTCACCACTGCTTCACATCTGTCTGCTAAGAATGGTTGTGCTTTaGTCACAGGAATGGGGCATA +
Preference number: 5 (lower is better)
Translates to: CISPLATWPSPLLHICLLRMVVL*SQEWGI
Trigger: TATGCCCCATTCCTGTGACAAAAGCACAACCATTCT...TAGCAGACAGATGTGAAGCAGTGGTGAAGGCCATGTAGCAAGTGGGGAAATACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS-3UTR CAA 90 bp ACACCAACCTCCCTAAGTACTTCCTCTGCCCTCCATCAGCATTTGAAGTCTCTGGGAATGGGGCATACTTaGTTAACTTCTACATTGGAA +
Preference number: 5 (lower is better)
Translates to: TPTSLSTSSALHQHLKSLGMGHT*LTSTLE
Trigger: TTCCAATGTAGAAGTTAACAAAGTATGCCCCATTCC...CAGAGACTTCAAATGCTGATGGAGGGCAGAGGAAGTACTTAGGGAGGTTGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS TCA 72 bp AGGCCAGGCTGCGGGGGAGGTCGTAGGTACTGTCTCTaGATTCTGTATTGTGCCGGCTCGGCTTGGGAAGGC +
Preference number: 6 (lower is better)
Translates to: RPGCGGGRRYCL*ILYCAGSAWEG
Trigger: GCCTTCCCAAGCCGAGCCGGCACAATACAGAATTCAGAGACAGTACCTACGACCTCCCCCGCAGCCTGGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340149.6
ENST00000361507.5
ENST00000528329.1
CDS CAA 90 bp AACGTGAACAGAGTTGGCTGGCTGGAGTGTGATGGGGCTGAGGACTaGCGCTCTCGGAGAAGGTGCTGGCTAGAGCTGCTGAGCTCAGCT +
Preference number: 6 (lower is better)
Translates to: NVNRVGWLECDGAED*RSRRRCWLELLSSA
Trigger: AGCTGAGCTCAGCAGCTCTAGCCAGCACCTTCTCCGAGAGCGCAAGTCCTCAGCCCCATCACACTCCAGCCAGCCAACTCTGTTCACGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS CAA 90 bp GCTGAATCTCACTTCCTCTGCTGGGGCCTCGGTGCACAGGAAGGGTaGTTGATGGGTAGCCAAGTGAGTCAAAGTGATGGGCCCCTGGGC +
Preference number: 6 (lower is better)
Translates to: AESHFLCWGLGAQEG*LMGSQVSQSDGPLG
Trigger: GCCCAGGGGCCCATCACTTTGACTCACTTGGCTACCCATCAACAACCCTTCCTGTGCACCGAGGCCCCAGCAGAGGAAGTGAGATTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS GCA 72 bp GCCAACTCCATCACTCATGGATTCAGCAGACCGGCCTaGACTCTCTCCACCACGCTGTGGGTACTCGTAGGT +
Preference number: 6 (lower is better)
Translates to: ANSITHGFSRPA*TLSTTLWVLVG
Trigger: ACCTACGAGTACCCACAGCGTGGTGGAGAGAGTGCAGGCCGGTCTGCTGAATCCATGAGTGATGGAGTTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS TCA 72 bp TGGGCTGCATGTGGTTTGACACAGGGGGTTCAAACGTaGACAGAGTTGGCTGGCTGGAGTGTGATGGGGCTG +
Preference number: 6 (lower is better)
Translates to: WAACGLTQGVQT*TELAGWSVMGL
Trigger: CAGCCCCATCACACTCCAGCCAGCCAACTCTGTTCACGTTTGAACCCCCTGTGTCAAACCACATGCAGCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS TCA 72 bp AGGTGCGCTGGTGGACAAGGTGGGCTGCATGTGGTTTaGCACAGGGGGTTCAAACGTGAACAGAGTTGGCTG +
Preference number: 6 (lower is better)
Translates to: RCAGGQGGLHVV*HRGFKREQSWL
Trigger: CAGCCAACTCTGTTCACGTTTGAACCCCCTGTGTCAAACCACATGCAGCCCACCTTGTCCACCAGCGCACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS TCA 72 bp CCCCGAACTCCCTGCACAGGGTGTTGCTGGGCGTCTTaGAGGTGTACACATCCTCATTATCTGTCTCGGAGC +
Preference number: 6 (lower is better)
Translates to: PRTPCTGCCWAS*RCTHPHYLSRS
Trigger: GCTCCGAGACAGATAATGAGGATGTGTACACCTTCAAGACGCCCAGCAACACCCTGTGCAGGGAGTTCGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340149.6
ENST00000361507.5
ENST00000528329.1
CDS CCA 72 bp ACTGGTGCAAGTAGAGATACTCCTGAGGTGCGCTGGTaGACAAGGTGGGCTGCATGTGGTTTGACACAGGGG +
Preference number: 6 (lower is better)
Translates to: TGASRDTPEVRW*TRWAACGLTQG
Trigger: CCCCTGTGTCAAACCACATGCAGCCCACCTTGTCCACCAGCGCACCTCAGGAGTATCTCTACTTGCACCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS CCA 72 bp AGTAGAGATACTCCTGAGGTGCGCTGGTGGACAAGGTaGGCTGCATGTGGTTTGACACAGGGGGTTCAAACG +
Preference number: 6 (lower is better)
Translates to: SRDTPEVRWWTR*AACGLTQGVQT
Trigger: CGTTTGAACCCCCTGTGTCAAACCACATGCAGCCCACCTTGTCCACCAGCGCACCTCAGGAGTATCTCTACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS CCA 72 bp TTTTCCCTGGCAGGAAAGAGCCAACTCCATCACTCATaGATTCAGCAGACCGGCCTGCACTCTCTCCACCAC +
Preference number: 6 (lower is better)
Translates to: FSLAGKSQLHHS*IQQTGLHSLHH
Trigger: GTGGTGGAGAGAGTGCAGGCCGGTCTGCTGAATCCATGAGTGATGGAGTTGGCTCTTTCCTGCCAGGGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS CAA 72 bp TCCCCGAACTCCCTGCACAGGGTGTTGCTGGGCGTCTaGAAGGTGTACACATCCTCATTATCTGTCTCGGAG +
Preference number: 6 (lower is better)
Translates to: SPNSLHRVLLGV*KVYTSSLSVSE
Trigger: CTCCGAGACAGATAATGAGGATGTGTACACCTTCAAGACGCCCAGCAACACCCTGTGCAGGGAGTTCGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340149.6
ENST00000361507.5
ENST00000528329.1
CDS CAA 72 bp TCTACCAGGAGGTCCCCGAACTCCCTGCACAGGGTGTaGCTGGGCGTCTTGAAGGTGTACACATCCTCATTA +
Preference number: 6 (lower is better)
Translates to: STRRSPNSLHRV*LGVLKVYTSSL
Trigger: TAATGAGGATGTGTACACCTTCAAGACGCCCAGCAACACCCTGTGCAGGGAGTTCGGGGACCTCCTGGTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340149.6
ENST00000361507.5
ENST00000528329.1
CDS GCA 72 bp GCTCATTGGGATGTAGACGCTCTGGGAATTATCACCTaGTCGTTCCATGGCCAACAGGGTGGAAGAACCTGG +
Preference number: 6 (lower is better)
Translates to: AHWDVDALGIIT*SFHGQQGGRTW
Trigger: CCAGGTTCTTCCACCCTGTTGGCCATGGAACGAGCAGGTGATAATTCCCAGAGCGTCTACATCCCAATGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS GCA 72 bp TTCCAACAGGAAACCTTAGCTAGAGCCTGCTCTCAATaGTCCAGGAATCCAAGGGCCTCACCTCAACCCCCT +
Preference number: 6 (lower is better)
Translates to: FQQETLARACSQ*SRNPRASPQPP
Trigger: AGGGGGTTGAGGTGAGGCCCTTGGATTCCTGGAGCATTGAGAGCAGGCTCTAGCTAAGGTTTCCTGTTGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534823.1
CDS CAA 90 bp TCCATATTGTCTACCAGGAGGTCCCCGAACTCCCTGCACAGGGTGTaGCTGGGCGTCTTGAAGGTGTACACATCCTCATTATCTGTCTCG +
Preference number: 6 (lower is better)
Translates to: SILSTRRSPNSLHRV*LGVLKVYTSSLSVS
Trigger: CGAGACAGATAATGAGGATGTGTACACCTTCAAGACGCCCAGCAACACCCTGTGCAGGGAGTTCGGGGACCTCCTGGTAGACAATATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340149.6
ENST00000361507.5
ENST00000528329.1
CDS CAA 90 bp TTGATGGGTAGCCAAGTGAGTCAAAGTGATGGGCCCCTGGGCTCATaGGGATGTAGACGCTCTGGGAATTATCACCTGCTCGTTCCATGG +
Preference number: 6 (lower is better)
Translates to: LMGSQVSQSDGPLGS*GCRRSGNYHLLVPW
Trigger: CCATGGAACGAGCAGGTGATAATTCCCAGAGCGTCTACATCCCAATGAGCCCAGGGGCCCATCACTTTGACTCACTTGGCTACCCATCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS TCA 72 bp CCTGGGCAAGTTTTTGTACAGCTGTGTCACTCCTCATaGGAAAAGAGGCTCTGGTGCCCTGAGAGAAGCTGG +
Preference number: 6 (lower is better)
Translates to: PGQVFVQLCHSS*EKRLWCPERSW
Trigger: CCAGCTTCTCTCAGGGCACCAGAGCCTCTTTTCTCATGAGGAGTGACACAGCTGTACAAAAACTTGCCCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340149.6
ENST00000361507.5
ENST00000526030.1
ENST00000528329.1
CDS GCA 72 bp AGCTGGCACTCCTTGCATTTTCTGCTCTTCGGCTTATaGACTGGTGCAAGTAGAGATACTCCTGAGGTGCGC +
Preference number: 6 (lower is better)
Translates to: SWHSLHFLLFGL*TGASRDTPEVR
Trigger: GCGCACCTCAGGAGTATCTCTACTTGCACCAGTGCATAAGCCGAAGAGCAGAAAATGCAAGGAGTGCCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS CCA 72 bp TGTAGACGCTCTGGGAATTATCACCTGCTCGTTCCATaGCCAACAGGGTGGAAGAACCTGGATTCATGGGCA +
Preference number: 6 (lower is better)
Translates to: CRRSGNYHLLVP*PTGWKNLDSWA
Trigger: TGCCCATGAATCCAGGTTCTTCCACCCTGTTGGCCATGGAACGAGCAGGTGATAATTCCCAGAGCGTCTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS CAA 90 bp ACCACTGATCCCGTTGACACAGTGTCCATTGCCCTGGGCAAGTTTTaGTACAGCTGTGTCACTCCTCATGAGAAAAGAGGCTCTGGTGCC +
Preference number: 6 (lower is better)
Translates to: TTDPVDTVSIALGKF*YSCVTPHEKRGSGA
Trigger: GGCACCAGAGCCTCTTTTCTCATGAGGAGTGACACAGCTGTACAAAAACTTGCCCAGGGCAATGGACACTGTGTCAACGGGATCAGTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340149.6
ENST00000361507.5
ENST00000528329.1
CDS CCA 72 bp GTTCCATGGCCAACAGGGTGGAAGAACCTGGATTCATaGGCACATAGTTGTCTTCAGAATTGGTGCTGTCCG +
Preference number: 6 (lower is better)
Translates to: VPWPTGWKNLDS*AHSCLQNWCCP
Trigger: CGGACAGCACCAATTCTGAAGACAACTATGTGCCCATGAATCCAGGTTCTTCCACCCTGTTGGCCATGGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS CAA 72 bp TGGTTGGCCCTAGACCAAGACTTGGTGATAGGTGACTaGAAGGGGAGTTCATCGATGACGGTGTTGTTCCTC +
Preference number: 6 (lower is better)
Translates to: WLALDQDLVIGD*KGSSSMTVLFL
Trigger: GAGGAACAACACCGTCATCGATGAACTCCCCTTCAAGTCACCTATCACCAAGTCTTGGTCTAGGGCCAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS CAA 72 bp CTGGAGTTGAAGGTGTGGTTGGCCCTAGACCAAGACTaGGTGATAGGTGACTTGAAGGGGAGTTCATCGATG +
Preference number: 6 (lower is better)
Translates to: LELKVWLALDQD*VIGDLKGSSSM
Trigger: CATCGATGAACTCCCCTTCAAGTCACCTATCACCAAGTCTTGGTCTAGGGCCAACCACACCTTCAACTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS CAA 90 bp GACTTGGTGATAGGTGACTTGAAGGGGAGTTCATCGATGACGGTGTaGTTCCTCAGGTCAAGTGGTGTTGGCTTTGCTTTCCGATCAGGT +
Preference number: 6 (lower is better)
Translates to: DLVIGDLKGSSSMTV*FLRSSGVGFAFRSG
Trigger: ACCTGATCGGAAAGCAAAGCCAACACCACTTGACCTGAGGAACAACACCGTCATCGATGAACTCCCCTTCAAGTCACCTATCACCAAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS CAA 90 bp TTGAAGGTGTGGTTGGCCCTAGACCAAGACTTGGTGATAGGTGACTaGAAGGGGAGTTCATCGATGACGGTGTTGTTCCTCAGGTCAAGT +
Preference number: 6 (lower is better)
Translates to: LKVWLALDQDLVIGD*KGSSSMTVLFLRSS
Trigger: ACTTGACCTGAGGAACAACACCGTCATCGATGAACTCCCCTTCAAGTCACCTATCACCAAGTCTTGGTCTAGGGCCAACCACACCTTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS CCA 72 bp GAGTTCATCGATGACGGTGTTGTTCCTCAGGTCAAGTaGTGTTGGCTTTGCTTTCCGATCAGGTTTGAGGTT +
Preference number: 6 (lower is better)
Translates to: EFIDDGVVPQVK*CWLCFPIRFEV
Trigger: AACCTCAAACCTGATCGGAAAGCAAAGCCAACACCACTTGACCTGAGGAACAACACCGTCATCGATGAACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS CAA 72 bp ATAGGTGACTTGAAGGGGAGTTCATCGATGACGGTGTaGTTCCTCAGGTCAAGTGGTGTTGGCTTTGCTTTC +
Preference number: 6 (lower is better)
Translates to: IGDLKGSSSMTV*FLRSSGVGFAF
Trigger: GAAAGCAAAGCCAACACCACTTGACCTGAGGAACAACACCGTCATCGATGAACTCCCCTTCAAGTCACCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340149.6
ENST00000361507.5
CDS CAA 90 bp AAAGGTCTAATTCCCTCACTTGTCTCTCTATTGCTAGCCTCGCCTTaGTCTCAGTTACTCCTCTCTTCAGGGATCTTCTTCATCCCACCA +
Preference number: 6 (lower is better)
Translates to: KGLIPSLVSLLLASP*SQLLLSSGIFFIPP
Trigger: TGGTGGGATGAAGAAGATCCCTGAAGAGAGGAGTAACTGAGACAAAGGCGAGGCTAGCAATAGAGAGACAAGTGAGGGAATTAGACCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340149.6
CDS CAA 72 bp GATACCAAAGGTCTAATTCCCTCACTTGTCTCTCTATaGCTAGCCTCGCCTTTGTCTCAGTTACTCCTCTCT +
Preference number: 6 (lower is better)
Translates to: DTKGLIPSLVSL*LASPLSQLLLS
Trigger: AGAGAGGAGTAACTGAGACAAAGGCGAGGCTAGCAATAGAGAGACAAGTGAGGGAATTAGACCTTTGGTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340149.6