RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GAB1 (Homo sapiens)

Ensembl gene IDs: ENSG00000109458

Ensembl transcript IDs: ENST00000262994.8, ENST00000262995.8, ENST00000505913.5, ENST00000507070.5, ENST00000507334.1, ENST00000508833.1, ENST00000509992.1, ENST00000510615.1, ENST00000511109.1, ENST00000511836.1, ENST00000512843.1, ENST00000514639.5, ENST00000515366.5, ENST00000515388.1

Found 481 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CAGAAATCAGGGCACATCTGTGTACTCAGGCAACAGTTAGAGGTCTaGATGGAGGGGGTCATGCCTCAACTGTGGGCACTCCTTTCTCTA +
Preference number: 1 (lower is better)
Translates to: QKSGHICVLRQQLEV*MEGVMPQLWALLSL
Trigger: TAGAGAAAGGAGTGCCCACAGTTGAGGCATGACCCCCTCCATTCAGACCTCTAACTGTTGCCTGAGTACACAGATGTGCCCTGATTTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262995.8
3UTR TCA 90 bp GGACCTGATTGCTTACTTGACAGTGGAGGAGAAGACCTACCAGAATaGCCCGAAGACAGAAATGGGAAGGATCAGCCCACCTCAGCATTA +
Preference number: 1 (lower is better)
Translates to: GPDCLLDSGGEDLPE*PEDRNGKDQPTSAL
Trigger: TAATGCTGAGGTGGGCTGATCCTTCCCATTTCTGTCTTCGGGTCATTCTGGTAGGTCTTCTCCTCCACTGTCAAGTAAGCAATCAGGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262995.8
3UTR CCA 90 bp GCCCTTATTTATTTGGACTTTTACACAATAAAATGCTGGCAGCACTaGCTGGCTGGAGGAGTAACAGGGCACGTGCATGTGGCAACAGAG +
Preference number: 1 (lower is better)
Translates to: ALIYLDFYTIKCWQH*LAGGVTGHVHVATE
Trigger: CTCTGTTGCCACATGCACGTGCCCTGTTACTCCTCCAGCCAGCCAGTGCTGCCAGCATTTTATTGTGTAAAAGTCCAAATAAATAAGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262995.8
3UTR CCA 90 bp CCCAAATATGATTCAGTGAAGAGTCAGAGTTGCAAGTGGGCTGGGTaGGCTGAGTGGACCAAAGTGCTGACTTACAGCAATTGTTGGGAT +
Preference number: 1 (lower is better)
Translates to: PKYDSVKSQSCKWAG*AEWTKVLTYSNCWD
Trigger: ATCCCAACAATTGCTGTAAGTCAGCACTTTGGTCCACTCAGCCCACCCAGCCCACTTGCAACTCTGACTCTTCACTGAATCATATTTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262995.8
3UTR CCA 90 bp CCCAAACTTCCCAAATATGATTCAGTGAAGAGTCAGAGTTGCAAGTaGGCTGGGTGGGCTGAGTGGACCAAAGTGCTGACTTACAGCAAT +
Preference number: 1 (lower is better)
Translates to: PKLPKYDSVKSQSCK*AGWAEWTKVLTYSN
Trigger: ATTGCTGTAAGTCAGCACTTTGGTCCACTCAGCCCACCCAGCCCACTTGCAACTCTGACTCTTCACTGAATCATATTTGGGAAGTTTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262995.8
3UTR CCA 90 bp GATTCAGTGAAGAGTCAGAGTTGCAAGTGGGCTGGGTGGGCTGAGTaGACCAAAGTGCTGACTTACAGCAATTGTTGGGATTTTATAAAG +
Preference number: 1 (lower is better)
Translates to: DSVKSQSCKWAGWAE*TKVLTYSNCWDFIK
Trigger: CTTTATAAAATCCCAACAATTGCTGTAAGTCAGCACTTTGGTCCACTCAGCCCACCCAGCCCACTTGCAACTCTGACTCTTCACTGAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262995.8
3UTR CCA 90 bp AAGATTTCCAATCTCCAAGATCATAACTGTCACATCGTTAACCAGTaGTTTTTAGCCCATTCCTGGCCAAAGTCTAGCTTCTTGGAGGTG +
Preference number: 1 (lower is better)
Translates to: KISNLQDHNCHIVNQ*FLAHSWPKSSFLEV
Trigger: CACCTCCAAGAAGCTAGACTTTGGCCAGGAATGGGCTAAAAACCACTGGTTAACGATGTGACAGTTATGATCTTGGAGATTGGAAATCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262995.8
3UTR TCA 90 bp GCACCACTTAAGTCTAAATTGCTTGATTATGTCAGAAAGGTCCTTTaGCTTCAACTCTACTCATTTGAGGATCTACCTAGAGTGGAAGTG +
Preference number: 1 (lower is better)
Translates to: APLKSKLLDYVRKVL*LQLYSFEDLPRVEV
Trigger: CACTTCCACTCTAGGTAGATCCTCAAATGAGTAGAGTTGAAGTCAAAGGACCTTTCTGACATAATCAAGCAATTTAGACTTAAGTGGTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
ENST00000512843.1
3UTR GCA 90 bp GCACATTCTGATGTGTTACATACCCTACTTTACCACACTGGAGACTaGTTATGTATTAACTTCCACTACCAGGATAACTTATTTTTGTAT +
Preference number: 1 (lower is better)
Translates to: AHSDVLHTLLYHTGD*LCINFHYQDNLFLY
Trigger: ATACAAAAATAAGTTATCCTGGTAGTGGAAGTTAATACATAAGCAGTCTCCAGTGTGGTAAAGTAGGGTATGTAACACATCAGAATGTGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262995.8
3UTR CCA 90 bp AGGTCCTTTGACTTCAACTCTACTCATTTGAGGATCTACCTAGAGTaGAAGTGTCAAGTCATTCTTCAAAAGGGATTTATCTTTACAATT +
Preference number: 1 (lower is better)
Translates to: RSFDFNSTHLRIYLE*KCQVILQKGFIFTI
Trigger: AATTGTAAAGATAAATCCCTTTTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAAATGAGTAGAGTTGAAGTCAAAGGACCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
ENST00000512843.1
3UTR-3UTR TCA 90 bp GTAGTCTTGAGGATCCTCCTGAATGCCAAGAGTTTCCAGGTGTGGTGGAACATTGGCACGAGAATCGCTTaGACCTGGGAGGCAGAGGTT +
Preference number: 2 (lower is better)
Translates to: VVLRILLNAKSFQVWWNIGTRIA*TWEAEV
Trigger: AACCTCTGCCTCCCAGGTTCAAGCGATTCTCGTGCC...AATGTTCCACCACACCTGGAAACTCTTGGCATTCAGGAGGATCCTCAAGACTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511836.1
3UTR-3UTR GCA 90 bp TATGGAGGAGGTAGAGTAGCAGAGGATGAATCTGCCTGGGTGGATGGTGGTGCTGTGCTTGTAAAGAGCTaGCAGGTGGCTTCACAGGAT +
Preference number: 2 (lower is better)
Translates to: YGGGRVAEDESAWVDGGAVLVKS*QVASQD
Trigger: ATCCTGTGAAGCCACCTGGCAGCTCTTTACAAGCAC...AGCACCACCATCCACCCAGGCAGATTCATCCTCTGCTACTCTACCTCCTCCATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511836.1
3UTR-3UTR CCA 90 bp GTAGTCTTGAGGATCCTCCTGAATGCCAAGAGTTTCCAGGTGTGGTGGAACATTATGAATCTGCCTGGGTaGATGGTGGTGCTGTATTTA +
Preference number: 2 (lower is better)
Translates to: VVLRILLNAKSFQVWWNIMNLPG*MVVLYL
Trigger: TAAATACAGCACCACCATCCACCCAGGCAGATTCAT...AATGTTCCACCACACCTGGAAACTCTTGGCATTCAGGAGGATCCTCAAGACTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511836.1
3UTR-3UTR GCA 90 bp AGACAGAATTATACCATCCCTCTGGTGTTTTCAGAAATCTGGTTGGAAGGAGTCTCAGTCTTTCAAAGGTaGAAGATCCCACCCGGCAGA +
Preference number: 2 (lower is better)
Translates to: RQNYTIPLVFSEIWLEGVSVFQR*KIPPGR
Trigger: TCTGCCGGGTGGGATCTTGCACCTTTGAAAGACTGA...GACTCCTTCCAACCAGATTTCTGAAAACACCAGAGGGATGGTATAATTCTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262995.8
3UTR CAA 90 bp AACCTAGTTTCTGAAGATAAAGGTTGCATGCAGGCCCTTATTTATTaGGACTTTTACACAATAAAATGCTGGCAGCACTGGCTGGCTGGA +
Preference number: 2 (lower is better)
Translates to: NLVSEDKGCMQALIY*DFYTIKCWQHWLAG
Trigger: TCCAGCCAGCCAGTGCTGCCAGCATTTTATTGTGTAAAAGTCCAAATAAATAAGGGCCTGCATGCAACCTTTATCTTCAGAAACTAGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262995.8
3UTR CAA 90 bp ACCATAGAATGCATGTATCTTTCTCACTGTGTGTATCCACTTAATTaGTTCATATGTCCAATCCCTGTCACGGACCTGATTGCTTACTTG +
Preference number: 2 (lower is better)
Translates to: TIECMYLSHCVYPLN*FICPIPVTDLIAYL
Trigger: CAAGTAAGCAATCAGGTCCGTGACAGGGATTGGACATATGAACAAATTAAGTGGATACACACAGTGAGAAAGATACATGCATTCTATGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262995.8
3UTR CAA 90 bp ATAGAGGTGGGACTGGGAAGCACAGTTAATGGCAGAATTGGGTTTTaGATGCAGATAAAGACTCTAAGGAAGGGCTGGAAATATAAATTT +
Preference number: 2 (lower is better)
Translates to: IEVGLGSTVNGRIGF*MQIKTLRKGWKYKF
Trigger: AAATTTATATTTCCAGCCCTTCCTTAGAGTCTTTATCTGCATCAAAAACCCAATTCTGCCATTAACTGTGCTTCCCAGTCCCACCTCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262995.8
3UTR CAA 90 bp TGCTTGATTATGTCAGAAAGGTCCTTTGACTTCAACTCTACTCATTaGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAAAAG +
Preference number: 2 (lower is better)
Translates to: CLIMSERSFDFNSTH*RIYLEWKCQVILQK
Trigger: CTTTTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAAATGAGTAGAGTTGAAGTCAAAGGACCTTTCTGACATAATCAAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
ENST00000512843.1
3UTR-3UTR TCA 90 bp GTTAACTGTGGAACAAATGTTTCTCTGGGAGCTAAACAATACTATTTTCCCACAGTCAGAAAGGTCCTTTaGCTTCAACTCTACTCATTT +
Preference number: 2 (lower is better)
Translates to: VNCGTNVSLGAKQYYFPTVRKVL*LQLYSF
Trigger: AAATGAGTAGAGTTGAAGTCAAAGGACCTTTCTGAC...TGTGGGAAAATAGTATTGTTTAGCTCCCAGAGAAACATTTGTTCCACAGTTAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
3UTR-3UTR CCA 90 bp GTTAACTGTGGAACAAATGTTTCTCTGGGAGCTAAACAATACTATTTTCCCACAAGGATCTACCTAGAGTaGAAGTGTCAAGTCATTCTT +
Preference number: 2 (lower is better)
Translates to: VNCGTNVSLGAKQYYFPTRIYLE*KCQVIL
Trigger: AAGAATGACTTGACACTTCCACTCTAGGTAGATCCT...TGTGGGAAAATAGTATTGTTTAGCTCCCAGAGAAACATTTGTTCCACAGTTAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
3UTR CAA 90 bp ATGAATTGTTCAGATACCACAAAGCACCACTTAAGTCTAAATTGCTaGATTATGTCAGAAAGGTCCTTTGACTTCAACTCTACTCATTTG +
Preference number: 2 (lower is better)
Translates to: MNCSDTTKHHLSLNC*IMSERSFDFNSTHL
Trigger: CAAATGAGTAGAGTTGAAGTCAAAGGACCTTTCTGACATAATCAAGCAATTTAGACTTAAGTGGTGCTTTGTGGTATCTGAACAATTCAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
ENST00000512843.1
3UTR TCA 72 bp GGGCACATCTGTGTACTCAGGCAACAGTTAGAGGTCTaGATGGAGGGGGTCATGCCTCAACTGTGGGCACTC +
Preference number: 3 (lower is better)
Translates to: GHICVLRQQLEV*MEGVMPQLWAL
Trigger: GAGTGCCCACAGTTGAGGCATGACCCCCTCCATTCAGACCTCTAACTGTTGCCTGAGTACACAGATGTGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262995.8
3UTR-3UTR CAA 90 bp ACAGGTAGTCTTGAGGATCCTCCTGAATGCCAAGAGTTTCCAGGTGTGGTGGAAAGGCACGAGAATCGCTaGAACCTGGGAGGCAGAGGT +
Preference number: 3 (lower is better)
Translates to: TGSLEDPPECQEFPGVVERHENR*NLGGRG
Trigger: ACCTCTGCCTCCCAGGTTCAAGCGATTCTCGTGCCT...TTCCACCACACCTGGAAACTCTTGGCATTCAGGAGGATCCTCAAGACTACCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511836.1
3UTR TCA 72 bp AGTGAAGAGTCAGAGTTGCAAGTGGGCTGGGTGGGCTaGGTGGACCAAAGTGCTGACTTACAGCAATTGTTG +
Preference number: 3 (lower is better)
Translates to: SEESELQVGWVG*VDQSADLQQLL
Trigger: CAACAATTGCTGTAAGTCAGCACTTTGGTCCACTCAGCCCACCCAGCCCACTTGCAACTCTGACTCTTCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262995.8
3UTR CCA 72 bp CTTTTACACAATAAAATGCTGGCAGCACTGGCTGGCTaGAGGAGTAACAGGGCACGTGCATGTGGCAACAGA +
Preference number: 3 (lower is better)
Translates to: LLHNKMLAALAG*RSNRARACGNR
Trigger: TCTGTTGCCACATGCACGTGCCCTGTTACTCCTCCAGCCAGCCAGTGCTGCCAGCATTTTATTGTGTAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262995.8
3UTR CCA 72 bp GATTCAGTGAAGAGTCAGAGTTGCAAGTGGGCTGGGTaGGCTGAGTGGACCAAAGTGCTGACTTACAGCAAT +
Preference number: 3 (lower is better)
Translates to: DSVKSQSCKWAG*AEWTKVLTYSN
Trigger: ATTGCTGTAAGTCAGCACTTTGGTCCACTCAGCCCACCCAGCCCACTTGCAACTCTGACTCTTCACTGAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262995.8
3UTR CCA 72 bp CCCAAATATGATTCAGTGAAGAGTCAGAGTTGCAAGTaGGCTGGGTGGGCTGAGTGGACCAAAGTGCTGACT +
Preference number: 3 (lower is better)
Translates to: PKYDSVKSQSCK*AGWAEWTKVLT
Trigger: AGTCAGCACTTTGGTCCACTCAGCCCACCCAGCCCACTTGCAACTCTGACTCTTCACTGAATCATATTTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262995.8
3UTR CCA 72 bp AGGAGAAGACCTACCAGAATGACCCGAAGACAGAAATaGGAAGGATCAGCCCACCTCAGCATTATTAGAGGG +
Preference number: 3 (lower is better)
Translates to: RRRPTRMTRRQK*EGSAHLSIIRG
Trigger: CCCTCTAATAATGCTGAGGTGGGCTGATCCTTCCCATTTCTGTCTTCGGGTCATTCTGGTAGGTCTTCTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262995.8
3UTR CCA 72 bp TATTTGGACTTTTACACAATAAAATGCTGGCAGCACTaGCTGGCTGGAGGAGTAACAGGGCACGTGCATGTG +
Preference number: 3 (lower is better)
Translates to: YLDFYTIKCWQH*LAGGVTGHVHV
Trigger: CACATGCACGTGCCCTGTTACTCCTCCAGCCAGCCAGTGCTGCCAGCATTTTATTGTGTAAAAGTCCAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262995.8
3UTR CCA 72 bp AATCTCCAAGATCATAACTGTCACATCGTTAACCAGTaGTTTTTAGCCCATTCCTGGCCAAAGTCTAGCTTC +
Preference number: 3 (lower is better)
Translates to: NLQDHNCHIVNQ*FLAHSWPKSSF
Trigger: GAAGCTAGACTTTGGCCAGGAATGGGCTAAAAACCACTGGTTAACGATGTGACAGTTATGATCTTGGAGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262995.8
3UTR TCA 72 bp GGTCTTAATATCTATGTCACAGGACCATGTTATAGGTaGGACAGAATTATACCATCCCTCTGGTGTTTTCAG +
Preference number: 3 (lower is better)
Translates to: GLNIYVTGPCYR*DRIIPSLWCFQ
Trigger: CTGAAAACACCAGAGGGATGGTATAATTCTGTCTCACCTATAACATGGTCCTGTGACATAGATATTAAGACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262995.8
3UTR-3UTR CAA 90 bp AGTAATACTACGAGTGTGTTAACTGTGGAACAAATGTTTCTCTGGGAGCTAAACTGTCAGAAAGGTCCTTaGACTTCAACTCTACTCATT +
Preference number: 3 (lower is better)
Translates to: SNTTSVLTVEQMFLWELNCQKGP*TSTLLI
Trigger: AATGAGTAGAGTTGAAGTCAAAGGACCTTTCTGACA...GTTTAGCTCCCAGAGAAACATTTGTTCCACAGTTAACACACTCGTAGTATTACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262995.8
ENST00000505913.5
3UTR GCA 72 bp GATGTGTTACATACCCTACTTTACCACACTGGAGACTaGTTATGTATTAACTTCCACTACCAGGATAACTTA +
Preference number: 3 (lower is better)
Translates to: DVLHTLLYHTGD*LCINFHYQDNL
Trigger: TAAGTTATCCTGGTAGTGGAAGTTAATACATAAGCAGTCTCCAGTGTGGTAAAGTAGGGTATGTAACACATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262995.8
3UTR CCA 72 bp CAGAATTATACCATCCCTCTGGTGTTTTCAGAAATCTaGTTGGAAGGAGTCCATGACTATAACATTTCACAT +
Preference number: 3 (lower is better)
Translates to: QNYTIPLVFSEI*LEGVHDYNISH
Trigger: ATGTGAAATGTTATAGTCATGGACTCCTTCCAACCAGATTTCTGAAAACACCAGAGGGATGGTATAATTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262995.8
3UTR-3UTR CAA 90 bp TTGTTCAGATACCACAAAGCACCACTTAAGTCTAAATTGCTTGATTATGTCAGATTCAACTCTACTCATTaGAGGATCTACCTAGAGTGG +
Preference number: 3 (lower is better)
Translates to: LFRYHKAPLKSKLLDYVRFNSTH*RIYLEW
Trigger: CCACTCTAGGTAGATCCTCAAATGAGTAGAGTTGAA...TCTGACATAATCAAGCAATTTAGACTTAAGTGGTGCTTTGTGGTATCTGAACAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
ENST00000512843.1
3UTR-3UTR CAA 90 bp GGGAGCTTTTTCTATTTACTTAGAGAGGATCATGACTTGTGTTTCAACATGATTCACAACCAAAGCTCATaGTCTAAACCTGATCAGTGT +
Preference number: 3 (lower is better)
Translates to: GSFFYLLREDHDLCFNMIHNQSS*SKPDQC
Trigger: ACACTGATCAGGTTTAGACAATGAGCTTTGGTTGTG...AATCATGTTGAAACACAAGTCATGATCCTCTCTAAGTAAATAGAAAAAGCTCCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262995.8
3UTR CCA 72 bp ATTATACCATCCCTCTGGTGTTTTCAGAAATCTGGTTaGAAGGAGTCCATGACTATAACATTTCACATTGTA +
Preference number: 3 (lower is better)
Translates to: IIPSLWCFQKSG*KESMTITFHIV
Trigger: TACAATGTGAAATGTTATAGTCATGGACTCCTTCCAACCAGATTTCTGAAAACACCAGAGGGATGGTATAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262995.8
3UTR TCA 72 bp AAGTCTAAATTGCTTGATTATGTCAGAAAGGTCCTTTaGCTTCAACTCTACTCATTTGAGGATCTACCTAGA +
Preference number: 3 (lower is better)
Translates to: KSKLLDYVRKVL*LQLYSFEDLPR
Trigger: TCTAGGTAGATCCTCAAATGAGTAGAGTTGAAGTCAAAGGACCTTTCTGACATAATCAAGCAATTTAGACTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
ENST00000512843.1
3UTR GCA 72 bp CATCAGATGTTATTGACAGTAGTTGTTACCATAGAATaGATGTATCTTTCTCACTGTGTGTATCCACTTAAT +
Preference number: 3 (lower is better)
Translates to: HQMLLTVVVTIE*MYLSHCVYPLN
Trigger: ATTAAGTGGATACACACAGTGAGAAAGATACATGCATTCTATGGTAACAACTACTGTCAATAACATCTGATG
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262995.8
CDS-3UTR GCA 90 bp AGGTCCTTTGACTTCAACTCTACTCATTTGAGGATCTACCTAGAGTGGAAGTGTGACACAGCCGACGCCTaGCGAGCGCGCAGTGGCGAG +
Preference number: 4 (lower is better)
Translates to: RSFDFNSTHLRIYLEWKCDTADA*RARSGE
Trigger: CTCGCCACTGCGCGCTCGGCAGGCGTCGGCTGTGTC...ACACTTCCACTCTAGGTAGATCCTCAAATGAGTAGAGTTGAAGTCAAAGGACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262994.8
ENST00000262995.8
CDS-3UTR TCA 90 bp AGAGGTCTGAATGGAGGGGGTCATGCCTCAACTGTGGGCACTCCTTTCTCTATGGAAGACCTACCAGAATaGCCCGAAGACAGAAATGGG +
Preference number: 4 (lower is better)
Translates to: RGLNGGGHASTVGTPFSMEDLPE*PEDRNG
Trigger: CCCATTTCTGTCTTCGGGTCATTCTGGTAGGTCTTC...CATAGAGAAAGGAGTGCCCACAGTTGAGGCATGACCCCCTCCATTCAGACCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262995.8
CDS-3UTR GCA 90 bp GAAAGGTCCTTTGACTTCAACTCTACTCATTTGAGGATCTACCTAGAGTGGAAGTGCCGTCTCGCCAGCTaGCTCAGCAGCGCTCGGACT +
Preference number: 4 (lower is better)
Translates to: ERSFDFNSTHLRIYLEWKCRLAS*LSSART
Trigger: AGTCCGAGCGCTGCTGAGGCAGCTGGCGAGACGGCA...CTTCCACTCTAGGTAGATCCTCAAATGAGTAGAGTTGAAGTCAAAGGACCTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262994.8
ENST00000262995.8
CDS-3UTR GCA 90 bp GACTTCAACTCTACTCATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCCTCGCCTCCAGACGTaGCGTCTCGCCAGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: DFNSTHLRIYLEWKCQVIPRLQT*RLASCL
Trigger: GAGGCAGCTGGCGAGACGGCACGTCTGGAGGCGAGG...AATGACTTGACACTTCCACTCTAGGTAGATCCTCAAATGAGTAGAGTTGAAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262994.8
ENST00000262995.8
CDS-3UTR GCA 90 bp TTCAACTCTACTCATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCACCACCGCTCATGGTaGGCGCGTCTCGGGCTCCGG +
Preference number: 4 (lower is better)
Translates to: FNSTHLRIYLEWKCQVILHHRSW*ARLGLR
Trigger: CCGGAGCCCGAGACGCGCGCACCATGAGCGGTGGTG...AAGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAAATGAGTAGAGTTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262994.8
ENST00000262995.8
CDS-3UTR GCA 90 bp AGTAATACTACGAGTGTGTTAACTGTGGAACAAATGTTTCTCTGGGAGCTAAACCACCACCGCTCATGGTaGGCGCGTCTCGGGCTCCGG +
Preference number: 4 (lower is better)
Translates to: SNTTSVLTVEQMFLWELNHHRSW*ARLGLR
Trigger: CCGGAGCCCGAGACGCGCGCACCATGAGCGGTGGTG...GTTTAGCTCCCAGAGAAACATTTGTTCCACAGTTAACACACTCGTAGTATTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262995.8
CDS-3UTR CCA 90 bp GAAAGGTCCTTTGACTTCAACTCTACTCATTTGAGGATCTACCTAGAGTGGAAGCTTCACCACCGCTCATaGTGCGCGCGTCTCGGGCTC +
Preference number: 4 (lower is better)
Translates to: ERSFDFNSTHLRIYLEWKLHHRS*CARLGL
Trigger: GAGCCCGAGACGCGCGCACCATGAGCGGTGGTGAAG...CTTCCACTCTAGGTAGATCCTCAAATGAGTAGAGTTGAAGTCAAAGGACCTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262994.8
ENST00000262995.8
CDS-3UTR CCA 90 bp GGAGGTAGAGTAGCAGAGGATGAATCTGCCTGGGTGGATGGTGGTGCTGTATTTGAGGATGAATCTGCCTaGGTGGATGGTGGTGCTGTA +
Preference number: 4 (lower is better)
Translates to: GGRVAEDESAWVDGGAVFEDESA*VDGGAV
Trigger: TACAGCACCACCATCCACCCAGGCAGATTCATCCTC...AAATACAGCACCACCATCCACCCAGGCAGATTCATCCTCTGCTACTCTACCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511836.1
CDS-3UTR CCA 90 bp AGAGGTCTGAATGGAGGGGGTCATGCCTCAACTGTGGGCACTCCTTTCTCTATGGGGACATGGGAAACCTaGAAGAGTCTCGAGCAAAAC +
Preference number: 4 (lower is better)
Translates to: RGLNGGGHASTVGTPFSMGTWET*KSLEQN
Trigger: GTTTTGCTCGAGACTCTTCCAGGTTTCCCATGTCCC...CATAGAGAAAGGAGTGCCCACAGTTGAGGCATGACCCCCTCCATTCAGACCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262995.8
CDS-3UTR GCA 90 bp TGCTTGATTATGTCAGAAAGGTCCTTTGACTTCAACTCTACTCATTTGAGGATCCCTCGCCTCCAGACGTaGCGTCTCGCCAGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: CLIMSERSFDFNSTHLRIPRLQT*RLASCL
Trigger: GAGGCAGCTGGCGAGACGGCACGTCTGGAGGCGAGG...GATCCTCAAATGAGTAGAGTTGAAGTCAAAGGACCTTTCTGACATAATCAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262994.8
ENST00000262995.8
CDS-3UTR GCA 90 bp CATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAAAAGGGATTTCCGGCCTCCTTTCAGTaGGCCCGCCTCGCCTCCAGA +
Preference number: 4 (lower is better)
Translates to: HLRIYLEWKCQVILQKGFPASFQ*ARLASR
Trigger: TCTGGAGGCGAGGCGGGCGCACTGAAAGGAGGCCGG...AAATCCCTTTTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262994.8
ENST00000262995.8
CDS-3UTR GCA 90 bp GAAAGGTCCTTTGACTTCAACTCTACTCATTTGAGGATCTACCTAGAGTGGAAGGGACAGACTCCACGGTaGGCGGGTTCCACGAGTTCG +
Preference number: 4 (lower is better)
Translates to: ERSFDFNSTHLRIYLEWKGQTPR*AGSTSS
Trigger: CGAACTCGTGGAACCCGCGCACCGTGGAGTCTGTCC...CTTCCACTCTAGGTAGATCCTCAAATGAGTAGAGTTGAAGTCAAAGGACCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262994.8
ENST00000262995.8
CDS-3UTR GCA 90 bp AGGTCCTTTGACTTCAACTCTACTCATTTGAGGATCTACCTAGAGTGGAAGTGTGGACAGACTCCACGGTaGGCGGGTTCCACGAGTTCG +
Preference number: 4 (lower is better)
Translates to: RSFDFNSTHLRIYLEWKCGQTPR*AGSTSS
Trigger: CGAACTCGTGGAACCCGCGCACCGTGGAGTCTGTCC...ACACTTCCACTCTAGGTAGATCCTCAAATGAGTAGAGTTGAAGTCAAAGGACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262994.8
ENST00000262995.8
CDS-3UTR GCA 90 bp TTGTTCAGATACCACAAAGCACCACTTAAGTCTAAATTGCTTGATTATGTCAGAGACACAGCCGACGCCTaGCGAGCGCGCAGTGGCGAG +
Preference number: 4 (lower is better)
Translates to: LFRYHKAPLKSKLLDYVRDTADA*RARSGE
Trigger: CTCGCCACTGCGCGCTCGGCAGGCGTCGGCTGTGTC...TCTGACATAATCAAGCAATTTAGACTTAAGTGGTGCTTTGTGGTATCTGAACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262994.8
ENST00000262995.8
CDS-3UTR GCA 90 bp AATTGCTTGATTATGTCAGAAAGGTCCTTTGACTTCAACTCTACTCATTTGAGGGACTCAGCGGGACTCTaGCCCGACTCGGTGCCGGAG +
Preference number: 4 (lower is better)
Translates to: NCLIMSERSFDFNSTHLRDSAGL*PDSVPE
Trigger: CTCCGGCACCGAGTCGGGGCAGAGTCCCGCTGAGTC...CCTCAAATGAGTAGAGTTGAAGTCAAAGGACCTTTCTGACATAATCAAGCAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262995.8
CDS-3UTR CCA 90 bp AGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAAAAGGGATTTATCTTTGCACCCCGGACGGACTaGGCGGACAGACTCCACGGT +
Preference number: 4 (lower is better)
Translates to: RIYLEWKCQVILQKGFIFAPRTD*ADRLHG
Trigger: ACCGTGGAGTCTGTCCGCCCAGTCCGTCCGGGGTGC...AAAGATAAATCCCTTTTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262994.8
ENST00000262995.8
CDS-3UTR CCA 90 bp ACTCATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAAAAGGGACTGCCGAGCGCGCAGTaGCGAGAACCTAGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: THLRIYLEWKCQVILQKGLPSAQ*REPSSP
Trigger: AGGAGAGCTAGGTTCTCGCCACTGCGCGCTCGGCAG...TCCCTTTTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAAATGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262994.8
ENST00000262995.8
CDS-3UTR TCA 90 bp CATGTTATGAATTGTTCAGATACCACAAAGCACCACTTAAGTCTAAATTGCTTGGCAGGCCCACGAACCTaGACAGAACGCGAGCCGGGG +
Preference number: 4 (lower is better)
Translates to: HVMNCSDTTKHHLSLNCLAGPRT*TEREPG
Trigger: CCCCGGCTCGCGTTCTGTTCAGGTTCGTGGGCCTGC...CAAGCAATTTAGACTTAAGTGGTGCTTTGTGGTATCTGAACAATTCATAACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262994.8
ENST00000262995.8
CDS-3UTR TCA 90 bp AGTCTAAATTGCTTGATTATGTCAGAAAGGTCCTTTGACTTCAACTCTACTCATGCAGGCCCACGAACCTaGACAGAACGCGAGCCGGGG +
Preference number: 4 (lower is better)
Translates to: SLNCLIMSERSFDFNSTHAGPRT*TEREPG
Trigger: CCCCGGCTCGCGTTCTGTTCAGGTTCGTGGGCCTGC...ATGAGTAGAGTTGAAGTCAAAGGACCTTTCTGACATAATCAAGCAATTTAGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262994.8
ENST00000262995.8
CDS-3UTR TCA 90 bp ACAGGTAGTCTTGAGGATCCTCCTGAATGCCAAGAGTTTCCAGGTGTGGTGGAAGGTGTGGTGGAACATTaGTTAGCTGATATGGAGGAG +
Preference number: 4 (lower is better)
Translates to: TGSLEDPPECQEFPGVVEGVVEH*LADMEE
Trigger: CTCCTCCATATCAGCTAATCAATGTTCCACCACACC...TTCCACCACACCTGGAAACTCTTGGCATTCAGGAGGATCCTCAAGACTACCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511836.1
CDS-3UTR TCA 90 bp AACTGTCACATCGTTAACCAGTGGTTTTTAGCCCATTCCTGGCCAAAGTCTAGCTGCTACACTGCTGCCTaGGCCACTGCTCTTTTGCTT +
Preference number: 4 (lower is better)
Translates to: NCHIVNQWFLAHSWPKSSCYTAA*ATALLL
Trigger: AAGCAAAAGAGCAGTGGCTCAGGCAGCAGTGTAGCA...GCTAGACTTTGGCCAGGAATGGGCTAAAAACCACTGGTTAACGATGTGACAGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262995.8
CDS-3UTR TCA 90 bp AGAGGTCTGAATGGAGGGGGTCATGCCTCAACTGTGGGCACTCCTTTCTCTATGGGACCATGTTATAGGTaGGACAGAATTATACCATCC +
Preference number: 4 (lower is better)
Translates to: RGLNGGGHASTVGTPFSMGPCYR*DRIIPS
Trigger: GGATGGTATAATTCTGTCTCACCTATAACATGGTCC...CATAGAGAAAGGAGTGCCCACAGTTGAGGCATGACCCCCTCCATTCAGACCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262995.8
CDS-3UTR GCA 90 bp TTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAAAAGGGATTTATTGCCGTCTCGCCAGCTaGCTCAGCAGCGCTCGGACT +
Preference number: 4 (lower is better)
Translates to: FEDLPRVEVSSHSSKGIYCRLAS*LSSART
Trigger: AGTCCGAGCGCTGCTGAGGCAGCTGGCGAGACGGCA...ATAAATCCCTTTTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262994.8
ENST00000262995.8
CDS-3UTR GCA 90 bp GTAGTCTTGAGGATCCTCCTGAATGCCAAGAGTTTCCAGGTGTGGTGGAACATTCTCCTCCTCGCTGTCTaGTACCAAGTAGAAAATCCG +
Preference number: 4 (lower is better)
Translates to: VVLRILLNAKSFQVWWNILLLAV*YQVENP
Trigger: CGGATTTTCTACTTGGTAGCAGACAGCGAGGAGGAG...AATGTTCCACCACACCTGGAAACTCTTGGCATTCAGGAGGATCCTCAAGACTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511836.1
CDS-3UTR GCA 90 bp GTAGTCTTGAGGATCCTCCTGAATGCCAAGAGTTTCCAGGTGTGGTGGAACATTGTGCTTGTAAAGAGCTaGCAGGTGGCTTCACAGGAT +
Preference number: 4 (lower is better)
Translates to: VVLRILLNAKSFQVWWNIVLVKS*QVASQD
Trigger: ATCCTGTGAAGCCACCTGGCAGCTCTTTACAAGCAC...AATGTTCCACCACACCTGGAAACTCTTGGCATTCAGGAGGATCCTCAAGACTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511836.1
CDS-3UTR GCA 90 bp TTCAACTCTACTCATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTGGAGCTTCTGTCCTTTaGGCTCCGCCCCCTAGGGAC +
Preference number: 4 (lower is better)
Translates to: FNSTHLRIYLEWKCQVILGASVL*APPPRD
Trigger: GTCCCTAGGGGGCGGAGCGCAAAGGACAGAAGCTCC...AAGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAAATGAGTAGAGTTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262995.8
CDS-3UTR CCA 90 bp AGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAAAAGGGATTTATCTTTCTTCACCACCGCTCATaGTGCGCGCGTCTCGGGCTC +
Preference number: 4 (lower is better)
Translates to: RIYLEWKCQVILQKGFIFLHHRS*CARLGL
Trigger: GAGCCCGAGACGCGCGCACCATGAGCGGTGGTGAAG...AAAGATAAATCCCTTTTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262994.8
ENST00000262995.8
CDS-3UTR CCA 90 bp GCTAAAGGTAAATCAGCTGGTGCTTGTAAAGAGCTGCCAGGTGGCTTCACAGGAATCTGCCTGGGTGGATaGTGGTGCTGTATTTATAGC +
Preference number: 4 (lower is better)
Translates to: AKGKSAGACKELPGGFTGICLGG*WCCIYS
Trigger: GCTATAAATACAGCACCACCATCCACCCAGGCAGAT...TCCTGTGAAGCCACCTGGCAGCTCTTTACAAGCACCAGCTGATTTACCTTTAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511836.1
CDS-3UTR TCA 90 bp AGGTCCTTTGACTTCAACTCTACTCATTTGAGGATCTACCTAGAGTGGAAGTGTCTTTTCTGTCTGGCTTaGGGTTCCTATCCACGGGGG +
Preference number: 4 (lower is better)
Translates to: RSFDFNSTHLRIYLEWKCLFCLA*GSYPRG
Trigger: CCCCCGTGGATAGGAACCTCAAGCCAGACAGAAAAG...ACACTTCCACTCTAGGTAGATCCTCAAATGAGTAGAGTTGAAGTCAAAGGACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR TCA 90 bp AGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAAAAGGGATTTATCTTTGTGGGCTGGGTGGGCTaGGTGGACCAAAGTGCTGAC +
Preference number: 4 (lower is better)
Translates to: RIYLEWKCQVILQKGFIFVGWVG*VDQSAD
Trigger: GTCAGCACTTTGGTCCACTCAGCCCACCCAGCCCAC...AAAGATAAATCCCTTTTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262995.8
CDS-3UTR CCA 90 bp TCCTTTGACTTCAACTCTACTCATTTGAGGATCTACCTAGAGTGGAAGTGTCAACAGGAACTGGCCTTCTaGGAGGGGTTTTTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: SFDFNSTHLRIYLEWKCQQELAF*EGFLGW
Trigger: CCAGCCCAAAAACCCCTCCCAGAAGGCCAGTTCCTG...TTGACACTTCCACTCTAGGTAGATCCTCAAATGAGTAGAGTTGAAGTCAAAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CCA 90 bp ATGTCAGAAAGGTCCTTTGACTTCAACTCTACTCATTTGAGGATCTACCTAGAGCAGGAACTGGCCTTCTaGGAGGGGTTTTTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: MSERSFDFNSTHLRIYLEQELAF*EGFLGW
Trigger: CCAGCCCAAAAACCCCTCCCAGAAGGCCAGTTCCTG...CTCTAGGTAGATCCTCAAATGAGTAGAGTTGAAGTCAAAGGACCTTTCTGACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CCA 90 bp ACTCATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAAAAGGGAAGTCAGAGTTGCAAGTaGGCTGGGTGGGCTGAGTGG +
Preference number: 4 (lower is better)
Translates to: THLRIYLEWKCQVILQKGSQSCK*AGWAEW
Trigger: CCACTCAGCCCACCCAGCCCACTTGCAACTCTGACT...TCCCTTTTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAAATGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262995.8
CDS-3UTR TCA 90 bp GAAAGGTCCTTTGACTTCAACTCTACTCATTTGAGGATCTACCTAGAGTGGAAGTTTTTGGGCTGGACCTaGAGCCCATATGAGCAGGAG +
Preference number: 4 (lower is better)
Translates to: ERSFDFNSTHLRIYLEWKFLGWT*SPYEQE
Trigger: CTCCTGCTCATATGGGCTTCAGGTCCAGCCCAAAAA...CTTCCACTCTAGGTAGATCCTCAAATGAGTAGAGTTGAAGTCAAAGGACCTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR TCA 90 bp CTTCAACTCTACTCATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTCTTCGCTGGCGTTTCTaGTTCTGTGGACTGTCTCCC +
Preference number: 4 (lower is better)
Translates to: LQLYSFEDLPRVEVSSHSLRWRF*FCGLSP
Trigger: GGGAGACAGTCCACAGAATCAGAAACGCCAGCGAAG...AGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAAATGAGTAGAGTTGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR GCA 90 bp GACTTCAACTCTACTCATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTTTCGAGTCTCTCCTCTaGAGGCCCACGAACCTGAAC +
Preference number: 4 (lower is better)
Translates to: DFNSTHLRIYLEWKCQVIFESLL*RPTNLN
Trigger: GTTCAGGTTCGTGGGCCTGCAGAGGAGAGACTCGAA...AATGACTTGACACTTCCACTCTAGGTAGATCCTCAAATGAGTAGAGTTGAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262994.8
ENST00000262995.8
CDS-3UTR GCA 90 bp TTTATAGCTAAAGGTAAATCAGCTGGTGCTTGTAAAGAGCTGCCAGGTGGCTTCGAGGATCCTCCTGAATaGCAAGAGTTTCCAGGTGTG +
Preference number: 4 (lower is better)
Translates to: FIAKGKSAGACKELPGGFEDPPE*QEFPGV
Trigger: CACACCTGGAAACTCTTGGCATTCAGGAGGATCCTC...GAAGCCACCTGGCAGCTCTTTACAAGCACCAGCTGATTTACCTTTAGCTATAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511836.1
CDS-3UTR GCA 90 bp GTTAACTGTGGAACAAATGTTTCTCTGGGAGCTAAACAATACTATTTTCCCACATCTGCCCCGACTCGGTaGCGGAGCTTCTGTCCTTTG +
Preference number: 4 (lower is better)
Translates to: VNCGTNVSLGAKQYYFPTSAPTR*RSFCPL
Trigger: CAAAGGACAGAAGCTCCGGCACCGAGTCGGGGCAGA...TGTGGGAAAATAGTATTGTTTAGCTCCCAGAGAAACATTTGTTCCACAGTTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262995.8
CDS-3UTR CCA 90 bp TTGTTCAGATACCACAAAGCACCACTTAAGTCTAAATTGCTTGATTATGTCAGACTGCCGAGCGCGCAGTaGCGAGAACCTAGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: LFRYHKAPLKSKLLDYVRLPSAQ*REPSSP
Trigger: AGGAGAGCTAGGTTCTCGCCACTGCGCGCTCGGCAG...TCTGACATAATCAAGCAATTTAGACTTAAGTGGTGCTTTGTGGTATCTGAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262994.8
ENST00000262995.8
CDS-3UTR CCA 90 bp GAAAGGTCCTTTGACTTCAACTCTACTCATTTGAGGATCTACCTAGAGTGGAAGGAGGATGAATCTGCCTaGGTGGATGGTGGTGCTGTA +
Preference number: 4 (lower is better)
Translates to: ERSFDFNSTHLRIYLEWKEDESA*VDGGAV
Trigger: TACAGCACCACCATCCACCCAGGCAGATTCATCCTC...CTTCCACTCTAGGTAGATCCTCAAATGAGTAGAGTTGAAGTCAAAGGACCTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
ENST00000512843.1
CDS-3UTR CCA 90 bp TCATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAAAAGGGATTGTCATGAGCTGGATGTaGTTTCGGTGGCCGAGGTGG +
Preference number: 4 (lower is better)
Translates to: SFEDLPRVEVSSHSSKGIVMSWM*FRWPRW
Trigger: CCACCTCGGCCACCGAAACCACATCCAGCTCATGAC...AATCCCTTTTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CCA 90 bp TTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAAAAGGGATTTATCGTCATGAGCTGGATGTaGTTTCGGTGGCCGAGGTGG +
Preference number: 4 (lower is better)
Translates to: LRIYLEWKCQVILQKGFIVMSWM*FRWPRW
Trigger: CCACCTCGGCCACCGAAACCACATCCAGCTCATGAC...GATAAATCCCTTTTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CCA 90 bp TTTGACTTCAACTCTACTCATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCAGATCGGTCATGAGCTaGATGTGGTTTCGGTGGCCG +
Preference number: 4 (lower is better)
Translates to: FDFNSTHLRIYLEWKCQVRSVMS*MWFRWP
Trigger: CGGCCACCGAAACCACATCCAGCTCATGACCGATCT...GACTTGACACTTCCACTCTAGGTAGATCCTCAAATGAGTAGAGTTGAAGTCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CCA 90 bp CTTCAACTCTACTCATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTAGATCGGTCATGAGCTaGATGTGGTTTCGGTGGCCG +
Preference number: 4 (lower is better)
Translates to: LQLYSFEDLPRVEVSSHSRSVMS*MWFRWP
Trigger: CGGCCACCGAAACCACATCCAGCTCATGACCGATCT...AGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAAATGAGTAGAGTTGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CCA 90 bp GAAAATAATCTTGAAGAAGATAGCCTCACCCTACCCAAACTTCCCAAATATGATGCAGCACTGGCTGGCTaGAGGAGTAACAGGGCACGT +
Preference number: 4 (lower is better)
Translates to: ENNLEEDSLTLPKLPKYDAALAG*RSNRAR
Trigger: ACGTGCCCTGTTACTCCTCCAGCCAGCCAGTGCTGC...ATCATATTTGGGAAGTTTGGGTAGGGTGAGGCTATCTTCTTCAAGATTATTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262995.8
CDS-3UTR TCA 90 bp TTTGACTTCAACTCTACTCATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCAGCAGATGGGGCACGTaGAGGTGGAGAGTCGTATAT +
Preference number: 4 (lower is better)
Translates to: FDFNSTHLRIYLEWKCQVSRWGT*RWRVVY
Trigger: ATATACGACTCTCCACCTTCACGTGCCCCATCTGCT...GACTTGACACTTCCACTCTAGGTAGATCCTCAAATGAGTAGAGTTGAAGTCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR TCA 90 bp GACTTCAACTCTACTCATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTACAGGAGATCGGTCATaGGCTGGATGTGGTTTCGGT +
Preference number: 4 (lower is better)
Translates to: DFNSTHLRIYLEWKCQVITGDRS*AGCGFG
Trigger: ACCGAAACCACATCCAGCTCATGACCGATCTCCTGT...AATGACTTGACACTTCCACTCTAGGTAGATCCTCAAATGAGTAGAGTTGAAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR TCA 90 bp TGCTTGATTATGTCAGAAAGGTCCTTTGACTTCAACTCTACTCATTTGAGGATCACTACTGTCAGTGTCTaGGGCGGTGCGTGGGATACT +
Preference number: 4 (lower is better)
Translates to: CLIMSERSFDFNSTHLRITTVSV*GGAWDT
Trigger: AGTATCCCACGCACCGCCTCAGACACTGACAGTAGT...GATCCTCAAATGAGTAGAGTTGAAGTCAAAGGACCTTTCTGACATAATCAAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR TCA 90 bp CATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAAAAGGGATTTCTTCGCTGGCGTTTCTaGTTCTGTGGACTGTCTCCC +
Preference number: 4 (lower is better)
Translates to: HLRIYLEWKCQVILQKGFLRWRF*FCGLSP
Trigger: GGGAGACAGTCCACAGAATCAGAAACGCCAGCGAAG...AAATCCCTTTTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR GCA 90 bp AGTAATACTACGAGTGTGTTAACTGTGGAACAAATGTTTCTCTGGGAGCTAAACTTCGAGTCTCTCCTCTaGAGGCCCACGAACCTGAAC +
Preference number: 4 (lower is better)
Translates to: SNTTSVLTVEQMFLWELNFESLL*RPTNLN
Trigger: GTTCAGGTTCGTGGGCCTGCAGAGGAGAGACTCGAA...GTTTAGCTCCCAGAGAAACATTTGTTCCACAGTTAACACACTCGTAGTATTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262995.8
CDS-3UTR GCA 90 bp TCCTTTGACTTCAACTCTACTCATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGGGTGGTTCACAGTCTaGAACAGGAACTGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: SFDFNSTHLRIYLEWKCQGWFTV*NRNWPS
Trigger: AGAAGGCCAGTTCCTGTTGCAGACTGTGAACCACCC...TTGACACTTCCACTCTAGGTAGATCCTCAAATGAGTAGAGTTGAAGTCAAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR GCA 90 bp CTTCAACTCTACTCATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTGGGTGGTTCACAGTCTaGAACAGGAACTGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: LQLYSFEDLPRVEVSSHSGWFTV*NRNWPS
Trigger: AGAAGGCCAGTTCCTGTTGCAGACTGTGAACCACCC...AGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAAATGAGTAGAGTTGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR GCA 90 bp GACTTCAACTCTACTCATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTTGCTGCCTGAGCCACTaGTCTTTTGCTTACGTGGTG +
Preference number: 4 (lower is better)
Translates to: DFNSTHLRIYLEWKCQVICCLSH*SFAYVV
Trigger: CACCACGTAAGCAAAAGAGCAGTGGCTCAGGCAGCA...AATGACTTGACACTTCCACTCTAGGTAGATCCTCAAATGAGTAGAGTTGAAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR GCA 90 bp TACTCATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAAAAGGGTGCTGCCTGAGCCACTaGTCTTTTGCTTACGTGGTG +
Preference number: 4 (lower is better)
Translates to: YSFEDLPRVEVSSHSSKGCCLSH*SFAYVV
Trigger: CACCACGTAAGCAAAAGAGCAGTGGCTCAGGCAGCA...CCCTTTTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAAATGAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR GCA 90 bp AGAGGTCTGAATGGAGGGGGTCATGCCTCAACTGTGGGCACTCCTTTCTCTATGGTTGTTACCATAGAATaGATGTATCTTTCTCACTGT +
Preference number: 4 (lower is better)
Translates to: RGLNGGGHASTVGTPFSMVVTIE*MYLSHC
Trigger: ACAGTGAGAAAGATACATGCATTCTATGGTAACAAC...CATAGAGAAAGGAGTGCCCACAGTTGAGGCATGACCCCCTCCATTCAGACCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262995.8
CDS-3UTR CCA 90 bp ATAGCTAAAGGTAAATCAGCTGGTGCTTGTAAAGAGCTGCCAGGTGGCTTCACAATGAATCTGCCTGGGTaGATGGTGGTGCTGTATTTA +
Preference number: 4 (lower is better)
Translates to: IAKGKSAGACKELPGGFTMNLPG*MVVLYL
Trigger: TAAATACAGCACCACCATCCACCCAGGCAGATTCAT...TGTGAAGCCACCTGGCAGCTCTTTACAAGCACCAGCTGATTTACCTTTAGCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511836.1
CDS-3UTR CCA 90 bp GACTTCAACTCTACTCATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTGAGGATGAATCTGCCTaGGTGGATGGTGGTGCTGTA +
Preference number: 4 (lower is better)
Translates to: DFNSTHLRIYLEWKCQVIEDESA*VDGGAV
Trigger: TACAGCACCACCATCCACCCAGGCAGATTCATCCTC...AATGACTTGACACTTCCACTCTAGGTAGATCCTCAAATGAGTAGAGTTGAAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
ENST00000512843.1
CDS-3UTR CCA 90 bp TACTCATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAAAAGGGCAGCATGCGTTCTGGTaGGTTCGGGCTTCTTGCTTT +
Preference number: 4 (lower is better)
Translates to: YSFEDLPRVEVSSHSSKGQHAFW*VRASCF
Trigger: AAAGCAAGAAGCCCGAACCCACCAGAACGCATGCTG...CCCTTTTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAAATGAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CCA 90 bp TCCTTTGACTTCAACTCTACTCATTTGAGGATCTACCTAGAGTGGAAGTGTCAAAATCAGCATGCGTTCTaGTGGGTTCGGGCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: SFDFNSTHLRIYLEWKCQNQHAF*WVRASC
Trigger: GCAAGAAGCCCGAACCCACCAGAACGCATGCTGATT...TTGACACTTCCACTCTAGGTAGATCCTCAAATGAGTAGAGTTGAAGTCAAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CCA 90 bp TTGATTATGTCAGAAAGGTCCTTTGACTTCAACTCTACTCATTTGAGGATCTACGTCATGAGCTGGATGTaGTTTCGGTGGCCGAGGTGG +
Preference number: 4 (lower is better)
Translates to: LIMSERSFDFNSTHLRIYVMSWM*FRWPRW
Trigger: CCACCTCGGCCACCGAAACCACATCCAGCTCATGAC...GTAGATCCTCAAATGAGTAGAGTTGAAGTCAAAGGACCTTTCTGACATAATCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CCA 90 bp TTCAACTCTACTCATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTTCTGGGAGGGGTTTTTaGGCTGGACCTGAAGCCCAT +
Preference number: 4 (lower is better)
Translates to: FNSTHLRIYLEWKCQVILSGRGF*AGPEAH
Trigger: ATGGGCTTCAGGTCCAGCCCAAAAACCCCTCCCAGA...AAGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAAATGAGTAGAGTTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CCA 90 bp TTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAAAAGGGATTTATCAGGAACTGGCCTTCTaGGAGGGGTTTTTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: FEDLPRVEVSSHSSKGIYQELAF*EGFLGW
Trigger: CCAGCCCAAAAACCCCTCCCAGAAGGCCAGTTCCTG...ATAAATCCCTTTTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CCA 90 bp AACTGTCACATCGTTAACCAGTGGTTTTTAGCCCATTCCTGGCCAAAGTCTAGCCACATCGTTAACCAGTaGTTTTTAGCCCATTCCTGG +
Preference number: 4 (lower is better)
Translates to: NCHIVNQWFLAHSWPKSSHIVNQ*FLAHSW
Trigger: CCAGGAATGGGCTAAAAACCACTGGTTAACGATGTG...GCTAGACTTTGGCCAGGAATGGGCTAAAAACCACTGGTTAACGATGTGACAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262995.8
CDS-3UTR CCA 90 bp TTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAAAAGGGATTTATCGCTGGGTGGGCTGAGTaGACCAAAGTGCTGACTTAC +
Preference number: 4 (lower is better)
Translates to: LRIYLEWKCQVILQKGFIAGWAE*TKVLTY
Trigger: GTAAGTCAGCACTTTGGTCCACTCAGCCCACCCAGC...GATAAATCCCTTTTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262995.8
CDS-3UTR CCA 90 bp AATTGCTTGATTATGTCAGAAAGGTCCTTTGACTTCAACTCTACTCATTTGAGGTGCAAGTGGGCTGGGTaGGCTGAGTGGACCAAAGTG +
Preference number: 4 (lower is better)
Translates to: NCLIMSERSFDFNSTHLRCKWAG*AEWTKV
Trigger: CACTTTGGTCCACTCAGCCCACCCAGCCCACTTGCA...CCTCAAATGAGTAGAGTTGAAGTCAAAGGACCTTTCTGACATAATCAAGCAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262995.8
CDS-3UTR CCA 90 bp TTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAAAAGGGATTTATCCGCTGGCGTTTCTGGTaGGTTCGGGCTTCTTGCTTT +
Preference number: 4 (lower is better)
Translates to: LRIYLEWKCQVILQKGFIRWRFW*VRASCF
Trigger: AAAGCAAGAAGCCCGAACCCACCAGAAACGCCAGCG...GATAAATCCCTTTTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512843.1
CDS-3UTR CCA 90 bp AGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAAAAGGGATTTATCTTTCTTCGCTGGCGTTTCTaGTGGGTTCGGGCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: RIYLEWKCQVILQKGFIFLRWRF*WVRASC
Trigger: GCAAGAAGCCCGAACCCACCAGAAACGCCAGCGAAG...AAAGATAAATCCCTTTTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512843.1
CDS-3UTR TCA 90 bp GAAAGGTCCTTTGACTTCAACTCTACTCATTTGAGGATCTACCTAGAGTGGAAGGGTGTGGTGGAACATTaGTTAGCTGATATGGAGGAG +
Preference number: 4 (lower is better)
Translates to: ERSFDFNSTHLRIYLEWKGVVEH*LADMEE
Trigger: CTCCTCCATATCAGCTAATCAATGTTCCACCACACC...CTTCCACTCTAGGTAGATCCTCAAATGAGTAGAGTTGAAGTCAAAGGACCTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
ENST00000512843.1
CDS-3UTR TCA 90 bp GACTTCAACTCTACTCATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTTCGGGCTTCTTGCTTTaGCAGTTGATGAGCAACAGG +
Preference number: 4 (lower is better)
Translates to: DFNSTHLRIYLEWKCQVISGFLL*QLMSNR
Trigger: CCTGTTGCTCATCAACTGTCAAAGCAAGAAGCCCGA...AATGACTTGACACTTCCACTCTAGGTAGATCCTCAAATGAGTAGAGTTGAAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
ENST00000512843.1
CDS-3UTR TCA 90 bp TCATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAAAAGGGATTAGCAGATGGGGCACGTaGAGGTGGAGAGTCGTATAT +
Preference number: 4 (lower is better)
Translates to: SFEDLPRVEVSSHSSKGISRWGT*RWRVVY
Trigger: ATATACGACTCTCCACCTTCACGTGCCCCATCTGCT...AATCCCTTTTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR TCA 90 bp TACTACGAGTGTGTTAACTGTGGAACAAATGTTTCTCTGGGAGCTAAACAATACAGCAGATGGGGCACGTaGAGGTGGAGAGTCGTATAT +
Preference number: 4 (lower is better)
Translates to: YYECVNCGTNVSLGAKQYSRWGT*RWRVVY
Trigger: ATATACGACTCTCCACCTTCACGTGCCCCATCTGCT...GTATTGTTTAGCTCCCAGAGAAACATTTGTTCCACAGTTAACACACTCGTAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262995.8
ENST00000505913.5
CDS-3UTR TCA 90 bp TTCAACTCTACTCATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTACAGGAGATCGGTCATaGGCTGGATGTGGTTTCGGT +
Preference number: 4 (lower is better)
Translates to: FNSTHLRIYLEWKCQVILTGDRS*AGCGFG
Trigger: ACCGAAACCACATCCAGCTCATGACCGATCTCCTGT...AAGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAAATGAGTAGAGTTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR TCA 90 bp AACTCCCAAAGGAATTATGGTAAGGTACATTGGGAAAACCCAGAACAATGTTTTCTTTTCTGTCTGGCTTaGGGTTCCTATCCACGGGGG +
Preference number: 4 (lower is better)
Translates to: NSQRNYGKVHWENPEQCFLFCLA*GSYPRG
Trigger: CCCCCGTGGATAGGAACCTCAAGCCAGACAGAAAAG...AAAACATTGTTCTGGGTTTTCCCAATGTACCTTACCATAATTCCTTTGGGAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262995.8
ENST00000505913.5
CDS-3UTR GCA 90 bp TCCTTTGACTTCAACTCTACTCATTTGAGGATCTACCTAGAGTGGAAGTGTCAACTCCTCCTCGCTGTCTaGTACCAAGTAGAAAATCCG +
Preference number: 4 (lower is better)
Translates to: SFDFNSTHLRIYLEWKCQLLLAV*YQVENP
Trigger: CGGATTTTCTACTTGGTAGCAGACAGCGAGGAGGAG...TTGACACTTCCACTCTAGGTAGATCCTCAAATGAGTAGAGTTGAAGTCAAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR GCA 90 bp CTTCAACTCTACTCATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTGTGCTTGTAAAGAGCTaGCAGGTGGCTTCACAGGAT +
Preference number: 4 (lower is better)
Translates to: LQLYSFEDLPRVEVSSHSVLVKS*QVASQD
Trigger: ATCCTGTGAAGCCACCTGGCAGCTCTTTACAAGCAC...AGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAAATGAGTAGAGTTGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
ENST00000512843.1
CDS-3UTR GCA 90 bp CTTCAACTCTACTCATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTGAGGATCCTCCTGAATaGCAAGAGTTTCCAGGTGTG +
Preference number: 4 (lower is better)
Translates to: LQLYSFEDLPRVEVSSHSEDPPE*QEFPGV
Trigger: CACACCTGGAAACTCTTGGCATTCAGGAGGATCCTC...AGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAAATGAGTAGAGTTGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
ENST00000512843.1
CDS-3UTR GCA 90 bp GACTTCAACTCTACTCATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTGAGGATCCTCCTGAATaGCAAGAGTTTCCAGGTGTG +
Preference number: 4 (lower is better)
Translates to: DFNSTHLRIYLEWKCQVIEDPPE*QEFPGV
Trigger: CACACCTGGAAACTCTTGGCATTCAGGAGGATCCTC...AATGACTTGACACTTCCACTCTAGGTAGATCCTCAAATGAGTAGAGTTGAAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
ENST00000512843.1
CDS-3UTR GCA 90 bp TACTACGAGTGTGTTAACTGTGGAACAAATGTTTCTCTGGGAGCTAAACAATACCAGTGTCTGAGGCGGTaGGTGGGATACTACACGTTT +
Preference number: 4 (lower is better)
Translates to: YYECVNCGTNVSLGAKQYQCLRR*VGYYTF
Trigger: AAACGTGTAGTATCCCACGCACCGCCTCAGACACTG...GTATTGTTTAGCTCCCAGAGAAACATTTGTTCCACAGTTAACACACTCGTAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262995.8
ENST00000505913.5
CDS-3UTR GCA 90 bp TTTGACTTCAACTCTACTCATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCGAGCCACTGCTCTTTTaGTTACGTGGTGGTGTGGAT +
Preference number: 4 (lower is better)
Translates to: FDFNSTHLRIYLEWKCQVEPLLF*LRGGVD
Trigger: ATCCACACCACCACGTAAGCAAAAGAGCAGTGGCTC...GACTTGACACTTCCACTCTAGGTAGATCCTCAAATGAGTAGAGTTGAAGTCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR GCA 90 bp AGAACTCCCAAAGGAATTATGGTAAGGTACATTGGGAAAACCCAGAACAATGTTTGCTGCCTGAGCCACTaGTCTTTTGCTTACGTGGTG +
Preference number: 4 (lower is better)
Translates to: RTPKGIMVRYIGKTQNNVCCLSH*SFAYVV
Trigger: CACCACGTAAGCAAAAGAGCAGTGGCTCAGGCAGCA...AACATTGTTCTGGGTTTTCCCAATGTACCTTACCATAATTCCTTTGGGAGTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CCA 90 bp CATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAAAAGGGATTTGAGGATGAATCTGCCTaGGTGGATGGTGGTGCTGTA +
Preference number: 4 (lower is better)
Translates to: HLRIYLEWKCQVILQKGFEDESA*VDGGAV
Trigger: TACAGCACCACCATCCACCCAGGCAGATTCATCCTC...AAATCCCTTTTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
ENST00000512843.1
CDS-3UTR CCA 90 bp TCATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAAAAGGGATTCAGCATGCGTTCTGGTaGGTTCGGGCTTCTTGCTTT +
Preference number: 4 (lower is better)
Translates to: SFEDLPRVEVSSHSSKGIQHAFW*VRASCF
Trigger: AAAGCAAGAAGCCCGAACCCACCAGAACGCATGCTG...AATCCCTTTTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CCA 90 bp TTCAACTCTACTCATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTTGGATGTGGTTTCGGTaGCCGAGGTGGAGGAATATC +
Preference number: 4 (lower is better)
Translates to: FNSTHLRIYLEWKCQVILWMWFR*PRWRNI
Trigger: GATATTCCTCCACCTCGGCCACCGAAACCACATCCA...AAGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAAATGAGTAGAGTTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CCA 90 bp AACTGTCACATCGTTAACCAGTGGTTTTTAGCCCATTCCTGGCCAAAGTCTAGCAATCCACAGTGGAAATaGTATTACTACGTGAAGGCG +
Preference number: 4 (lower is better)
Translates to: NCHIVNQWFLAHSWPKSSNPQWK*YYYVKA
Trigger: CGCCTTCACGTAGTAATACCATTTCCACTGTGGATT...GCTAGACTTTGGCCAGGAATGGGCTAAAAACCACTGGTTAACGATGTGACAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262995.8
CDS-3UTR CCA 90 bp TTCAACTCTACTCATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTGTCTGCAACAGGAACTaGCCTTCTGGGAGGGGTTTT +
Preference number: 4 (lower is better)
Translates to: FNSTHLRIYLEWKCQVILVCNRN*PSGRGF
Trigger: AAAACCCCTCCCAGAAGGCCAGTTCCTGTTGCAGAC...AAGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAAATGAGTAGAGTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CCA 90 bp TCCTTTGACTTCAACTCTACTCATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGGGACATGGGAAACCTaGAAGAGTCTCGAGCAAAAC +
Preference number: 4 (lower is better)
Translates to: SFDFNSTHLRIYLEWKCQGTWET*KSLEQN
Trigger: GTTTTGCTCGAGACTCTTCCAGGTTTCCCATGTCCC...TTGACACTTCCACTCTAGGTAGATCCTCAAATGAGTAGAGTTGAAGTCAAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CCA 90 bp AGACAGAATTATACCATCCCTCTGGTGTTTTCAGAAATCTGGTTGGAAGGAGTCGCTCTTTTGCTTACGTaGTGGTGTGGATTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: RQNYTIPLVFSEIWLEGVALLLT*WCGFPR
Trigger: TCTGGGAAATCCACACCACCACGTAAGCAAAAGAGC...GACTCCTTCCAACCAGATTTCTGAAAACACCAGAGGGATGGTATAATTCTGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262995.8
CDS-3UTR CCA 90 bp TCATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAAAAGGGATTACCCGAAGACAGAAATaGGAAGGATCAGCCCACCTC +
Preference number: 4 (lower is better)
Translates to: SFEDLPRVEVSSHSSKGITRRQK*EGSAHL
Trigger: GAGGTGGGCTGATCCTTCCCATTTCTGTCTTCGGGT...AATCCCTTTTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262995.8
CDS-3UTR CCA 90 bp GAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAAAAGGGATTTATCTTAAATGCTGGCAGCACTaGCTGGCTGGAGGAGTAACA +
Preference number: 4 (lower is better)
Translates to: EDLPRVEVSSHSSKGIYLKCWQH*LAGGVT
Trigger: TGTTACTCCTCCAGCCAGCCAGTGCTGCCAGCATTT...AAGATAAATCCCTTTTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262995.8
CDS-3UTR TCA 90 bp CTTCAACTCTACTCATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTGGTGTGGTGGAACATTaGTTAGCTGATATGGAGGAG +
Preference number: 4 (lower is better)
Translates to: LQLYSFEDLPRVEVSSHSGVVEH*LADMEE
Trigger: CTCCTCCATATCAGCTAATCAATGTTCCACCACACC...AGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAAATGAGTAGAGTTGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
ENST00000512843.1
CDS-3UTR TCA 90 bp GAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAAAAGGGATTTATCTTTCGGGCTTCTTGCTTTaGCAGTTGATGAGCAACAGG +
Preference number: 4 (lower is better)
Translates to: EDLPRVEVSSHSSKGIYLSGFLL*QLMSNR
Trigger: CCTGTTGCTCATCAACTGTCAAAGCAAGAAGCCCGA...AAGATAAATCCCTTTTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
ENST00000512843.1
CDS-3UTR TCA 90 bp TCATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAAAAGGGATTTCGGGCTTCTTGCTTTaGCAGTTGATGAGCAACAGG +
Preference number: 4 (lower is better)
Translates to: SFEDLPRVEVSSHSSKGISGFLL*QLMSNR
Trigger: CCTGTTGCTCATCAACTGTCAAAGCAAGAAGCCCGA...AATCCCTTTTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
ENST00000512843.1
CDS-3UTR TCA 90 bp TTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAAAAGGGATTTATACAGGAGATCGGTCATaGGCTGGATGTGGTTTCGGT +
Preference number: 4 (lower is better)
Translates to: FEDLPRVEVSSHSSKGIYTGDRS*AGCGFG
Trigger: ACCGAAACCACATCCAGCTCATGACCGATCTCCTGT...ATAAATCCCTTTTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR TCA 90 bp CTAAATTGCTTGATTATGTCAGAAAGGTCCTTTGACTTCAACTCTACTCATTTGACTACTGTCAGTGTCTaGGGCGGTGCGTGGGATACT +
Preference number: 4 (lower is better)
Translates to: LNCLIMSERSFDFNSTHLTTVSV*GGAWDT
Trigger: AGTATCCCACGCACCGCCTCAGACACTGACAGTAGT...CAAATGAGTAGAGTTGAAGTCAAAGGACCTTTCTGACATAATCAAGCAATTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR TCA 90 bp GAGTGTGTTAACTGTGGAACAAATGTTTCTCTGGGAGCTAAACAATACTATTTTACTACTGTCAGTGTCTaGGGCGGTGCGTGGGATACT +
Preference number: 4 (lower is better)
Translates to: ECVNCGTNVSLGAKQYYFTTVSV*GGAWDT
Trigger: AGTATCCCACGCACCGCCTCAGACACTGACAGTAGT...AAAATAGTATTGTTTAGCTCCCAGAGAAACATTTGTTCCACAGTTAACACACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR TCA 90 bp GACTTCAACTCTACTCATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTAATGGTATTACTACGTaGAGGCGACATCCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: DFNSTHLRIYLEWKCQVINGITT*RRHPCC
Trigger: ACAGCAGGGATGTCGCCTTCACGTAGTAATACCATT...AATGACTTGACACTTCCACTCTAGGTAGATCCTCAAATGAGTAGAGTTGAAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR TCA 90 bp TTTGACTTCAACTCTACTCATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATGTTGTCGTGGTGGTaGATTGGGATTCATTGGGAC +
Preference number: 4 (lower is better)
Translates to: FDFNSTHLRIYLEWKCQVMLSWW*IGIHWD
Trigger: GTCCCAATGAATCCCAATTCACCACCACGACAACAT...GACTTGACACTTCCACTCTAGGTAGATCCTCAAATGAGTAGAGTTGAAGTCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR TCA 90 bp CATGTTATGAATTGTTCAGATACCACAAAGCACCACTTAAGTCTAAATTGCTTGGACCTGAAGCCCATATaGGCAGGAGGAGGAACTTGC +
Preference number: 4 (lower is better)
Translates to: HVMNCSDTTKHHLSLNCLDLKPI*AGGGTC
Trigger: GCAAGTTCCTCCTCCTGCTCATATGGGCTTCAGGTC...CAAGCAATTTAGACTTAAGTGGTGCTTTGTGGTATCTGAACAATTCATAACATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR TCA 90 bp AGTGTGTTAACTGTGGAACAAATGTTTCTCTGGGAGCTAAACAATACTATTTTCGACCTGAAGCCCATATaGGCAGGAGGAGGAACTTGC +
Preference number: 4 (lower is better)
Translates to: SVLTVEQMFLWELNNTIFDLKPI*AGGGTC
Trigger: GCAAGTTCCTCCTCCTGCTCATATGGGCTTCAGGTC...GAAAATAGTATTGTTTAGCTCCCAGAGAAACATTTGTTCCACAGTTAACACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR TCA 90 bp CTAAATTGCTTGATTATGTCAGAAAGGTCCTTTGACTTCAACTCTACTCATTTGGACCTGAAGCCCATATaGGCAGGAGGAGGAACTTGC +
Preference number: 4 (lower is better)
Translates to: LNCLIMSERSFDFNSTHLDLKPI*AGGGTC
Trigger: GCAAGTTCCTCCTCCTGCTCATATGGGCTTCAGGTC...CAAATGAGTAGAGTTGAAGTCAAAGGACCTTTCTGACATAATCAAGCAATTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR TCA 90 bp TTGATTATGTCAGAAAGGTCCTTTGACTTCAACTCTACTCATTTGAGGATCTACTTTTTGGGCTGGACCTaGAGCCCATATGAGCAGGAG +
Preference number: 4 (lower is better)
Translates to: LIMSERSFDFNSTHLRIYFLGWT*SPYEQE
Trigger: CTCCTGCTCATATGGGCTTCAGGTCCAGCCCAAAAA...GTAGATCCTCAAATGAGTAGAGTTGAAGTCAAAGGACCTTTCTGACATAATCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR TCA 90 bp AGTGTGTTAACTGTGGAACAAATGTTTCTCTGGGAGCTAAACAATACTATTTTCCTTTTCTGTCTGGCTTaGGGTTCCTATCCACGGGGG +
Preference number: 4 (lower is better)
Translates to: SVLTVEQMFLWELNNTIFLFCLA*GSYPRG
Trigger: CCCCCGTGGATAGGAACCTCAAGCCAGACAGAAAAG...GAAAATAGTATTGTTTAGCTCCCAGAGAAACATTTGTTCCACAGTTAACACACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR TCA 90 bp GTTAACTGTGGAACAAATGTTTCTCTGGGAGCTAAACAATACTATTTTCCCACATGCTACACTGCTGCCTaGGCCACTGCTCTTTTGCTT +
Preference number: 4 (lower is better)
Translates to: VNCGTNVSLGAKQYYFPTCYTAA*ATALLL
Trigger: AAGCAAAAGAGCAGTGGCTCAGGCAGCAGTGTAGCA...TGTGGGAAAATAGTATTGTTTAGCTCCCAGAGAAACATTTGTTCCACAGTTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR TCA 90 bp TTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAAAAGGGATTTATTGCTACACTGCTGCCTaGGCCACTGCTCTTTTGCTT +
Preference number: 4 (lower is better)
Translates to: FEDLPRVEVSSHSSKGIYCYTAA*ATALLL
Trigger: AAGCAAAAGAGCAGTGGCTCAGGCAGCAGTGTAGCA...ATAAATCCCTTTTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR GCA 90 bp AACTCTACTCATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAACAGTTAAACGGCCACTaGGTAACACGAACCATCTCC +
Preference number: 4 (lower is better)
Translates to: NSTHLRIYLEWKCQVILQQLNGH*VTRTIS
Trigger: GGAGATGGTTCGTGTTACGCAGTGGCCGTTTAACTG...TTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAAATGAGTAGAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR GCA 90 bp TTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAAAAGGGATTTATCCAGTTAAACGGCCACTaGGTAACACGAACCATCTCC +
Preference number: 4 (lower is better)
Translates to: LRIYLEWKCQVILQKGFIQLNGH*VTRTIS
Trigger: GGAGATGGTTCGTGTTACGCAGTGGCCGTTTAACTG...GATAAATCCCTTTTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR GCA 90 bp AACTCTACTCATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAAGTGCTTGTAAAGAGCTaGCAGGTGGCTTCACAGGAT +
Preference number: 4 (lower is better)
Translates to: NSTHLRIYLEWKCQVILQVLVKS*QVASQD
Trigger: ATCCTGTGAAGCCACCTGGCAGCTCTTTACAAGCAC...TTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAAATGAGTAGAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
ENST00000512843.1
CDS-3UTR GCA 90 bp TTCAACTCTACTCATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTGTGCTTGTAAAGAGCTaGCAGGTGGCTTCACAGGAT +
Preference number: 4 (lower is better)
Translates to: FNSTHLRIYLEWKCQVILVLVKS*QVASQD
Trigger: ATCCTGTGAAGCCACCTGGCAGCTCTTTACAAGCAC...AAGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAAATGAGTAGAGTTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
ENST00000512843.1
CDS-3UTR GCA 90 bp TCATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAAAAGGGATTGAGGATCCTCCTGAATaGCAAGAGTTTCCAGGTGTG +
Preference number: 4 (lower is better)
Translates to: SFEDLPRVEVSSHSSKGIEDPPE*QEFPGV
Trigger: CACACCTGGAAACTCTTGGCATTCAGGAGGATCCTC...AATCCCTTTTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
ENST00000512843.1
CDS-3UTR GCA 90 bp AATTGCTTGATTATGTCAGAAAGGTCCTTTGACTTCAACTCTACTCATTTGAGGCAGTGTCTGAGGCGGTaGGTGGGATACTACACGTTT +
Preference number: 4 (lower is better)
Translates to: NCLIMSERSFDFNSTHLRQCLRR*VGYYTF
Trigger: AAACGTGTAGTATCCCACGCACCGCCTCAGACACTG...CCTCAAATGAGTAGAGTTGAAGTCAAAGGACCTTTCTGACATAATCAAGCAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR GCA 90 bp TTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAAAAGGGATTTATGGGTGGTTCACAGTCTaGAACAGGAACTGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: FEDLPRVEVSSHSSKGIYGWFTV*NRNWPS
Trigger: AGAAGGCCAGTTCCTGTTGCAGACTGTGAACCACCC...ATAAATCCCTTTTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR GCA 90 bp AGTGTGTTAACTGTGGAACAAATGTTTCTCTGGGAGCTAAACAATACTATTTTCGTGAAGAGTCAGAGTTaGAAGTGGGCTGGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: SVLTVEQMFLWELNNTIFVKSQS*KWAGWA
Trigger: AGCCCACCCAGCCCACTTGCAACTCTGACTCTTCAC...GAAAATAGTATTGTTTAGCTCCCAGAGAAACATTTGTTCCACAGTTAACACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262995.8
CDS-3UTR CCA 90 bp ATGTCAGAAAGGTCCTTTGACTTCAACTCTACTCATTTGAGGATCTACCTAGAGATCTGCCTGGGTGGATaGTGGTGCTGTATTTATAGC +
Preference number: 4 (lower is better)
Translates to: MSERSFDFNSTHLRIYLEICLGG*WCCIYS
Trigger: GCTATAAATACAGCACCACCATCCACCCAGGCAGAT...CTCTAGGTAGATCCTCAAATGAGTAGAGTTGAAGTCAAAGGACCTTTCTGACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
ENST00000512843.1
CDS-3UTR CCA 90 bp GTTAACTGTGGAACAAATGTTTCTCTGGGAGCTAAACAATACTATTTTCCCACAAATCAGCATGCGTTCTaGTGGGTTCGGGCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: VNCGTNVSLGAKQYYFPTNQHAF*WVRASC
Trigger: GCAAGAAGCCCGAACCCACCAGAACGCATGCTGATT...TGTGGGAAAATAGTATTGTTTAGCTCCCAGAGAAACATTTGTTCCACAGTTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CCA 90 bp AGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAAAAGGGATTTATCTTTAATCAGCATGCGTTCTaGTGGGTTCGGGCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: RIYLEWKCQVILQKGFIFNQHAF*WVRASC
Trigger: GCAAGAAGCCCGAACCCACCAGAACGCATGCTGATT...AAAGATAAATCCCTTTTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CCA 90 bp AGACAGAATTATACCATCCCTCTGGTGTTTTCAGAAATCTGGTTGGAAGGAGTCTCCCAAGGTTCCTTCTaGAAATGTTCGTGGAATCTG +
Preference number: 4 (lower is better)
Translates to: RQNYTIPLVFSEIWLEGVSQGSF*KCSWNL
Trigger: CAGATTCCACGAACATTTCCAGAAGGAACCTTGGGA...GACTCCTTCCAACCAGATTTCTGAAAACACCAGAGGGATGGTATAATTCTGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262995.8
CDS-3UTR CCA 90 bp GGGAGCTTTTTCTATTTACTTAGAGAGGATCATGACTTGTGTTTCAACATGATTAGATCGGTCATGAGCTaGATGTGGTTTCGGTGGCCG +
Preference number: 4 (lower is better)
Translates to: GSFFYLLREDHDLCFNMIRSVMS*MWFRWP
Trigger: CGGCCACCGAAACCACATCCAGCTCATGACCGATCT...AATCATGTTGAAACACAAGTCATGATCCTCTCTAAGTAAATAGAAAAAGCTCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262995.8
CDS-3UTR CCA 90 bp GAAAGGTCCTTTGACTTCAACTCTACTCATTTGAGGATCTACCTAGAGTGGAAGGTCGTGGTGGTGAATTaGGATTCATTGGGACGTAAT +
Preference number: 4 (lower is better)
Translates to: ERSFDFNSTHLRIYLEWKVVVVN*DSLGRN
Trigger: ATTACGTCCCAATGAATCCCAATTCACCACCACGAC...CTTCCACTCTAGGTAGATCCTCAAATGAGTAGAGTTGAAGTCAAAGGACCTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CCA 90 bp TTGTTCAGATACCACAAAGCACCACTTAAGTCTAAATTGCTTGATTATGTCAGATCTGGGAGGGGTTTTTaGGCTGGACCTGAAGCCCAT +
Preference number: 4 (lower is better)
Translates to: LFRYHKAPLKSKLLDYVRSGRGF*AGPEAH
Trigger: ATGGGCTTCAGGTCCAGCCCAAAAACCCCTCCCAGA...TCTGACATAATCAAGCAATTTAGACTTAAGTGGTGCTTTGTGGTATCTGAACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CCA 90 bp AGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAAAAGGGATTTATCTTTGTCTGCAACAGGAACTaGCCTTCTGGGAGGGGTTTT +
Preference number: 4 (lower is better)
Translates to: RIYLEWKCQVILQKGFIFVCNRN*PSGRGF
Trigger: AAAACCCCTCCCAGAAGGCCAGTTCCTGTTGCAGAC...AAAGATAAATCCCTTTTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CCA 90 bp TTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAAAAGGGATTTATCGGGACATGGGAAACCTaGAAGAGTCTCGAGCAAAAC +
Preference number: 4 (lower is better)
Translates to: LRIYLEWKCQVILQKGFIGTWET*KSLEQN
Trigger: GTTTTGCTCGAGACTCTTCCAGGTTTCCCATGTCCC...GATAAATCCCTTTTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR TCA 90 bp TCATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAAAAGGGATTGGTGTGGTGGAACATTaGTTAGCTGATATGGAGGAG +
Preference number: 4 (lower is better)
Translates to: SFEDLPRVEVSSHSSKGIGVVEH*LADMEE
Trigger: CTCCTCCATATCAGCTAATCAATGTTCCACCACACC...AATCCCTTTTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
ENST00000512843.1
CDS-3UTR TCA 90 bp GAAAATAATCTTGAAGAAGATAGCCTCACCCTACCCAAACTTCCCAAATATGATTCGGGCTTCTTGCTTTaGCAGTTGATGAGCAACAGG +
Preference number: 4 (lower is better)
Translates to: ENNLEEDSLTLPKLPKYDSGFLL*QLMSNR
Trigger: CCTGTTGCTCATCAACTGTCAAAGCAAGAAGCCCGA...ATCATATTTGGGAAGTTTGGGTAGGGTGAGGCTATCTTCTTCAAGATTATTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262995.8
CDS-3UTR TCA 90 bp GACTTCAACTCTACTCATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTGATACATGCCTCATTTaGGTCTCTACACTCGATGTC +
Preference number: 4 (lower is better)
Translates to: DFNSTHLRIYLEWKCQVIDTCLI*VSTLDV
Trigger: GACATCGAGTGTAGAGACTCAAATGAGGCATGTATC...AATGACTTGACACTTCCACTCTAGGTAGATCCTCAAATGAGTAGAGTTGAAGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR TCA 90 bp CTTCAACTCTACTCATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTGATACATGCCTCATTTaGGTCTCTACACTCGATGTC +
Preference number: 4 (lower is better)
Translates to: LQLYSFEDLPRVEVSSHSDTCLI*VSTLDV
Trigger: GACATCGAGTGTAGAGACTCAAATGAGGCATGTATC...AGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAAATGAGTAGAGTTGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR TCA 90 bp GAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAAAAGGGATTTATCTTAATGGTATTACTACGTaGAGGCGACATCCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: EDLPRVEVSSHSSKGIYLNGITT*RRHPCC
Trigger: ACAGCAGGGATGTCGCCTTCACGTAGTAATACCATT...AAGATAAATCCCTTTTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR TCA 90 bp AACTCTACTCATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAAATGTTGTCGTGGTGGTaGATTGGGATTCATTGGGAC +
Preference number: 4 (lower is better)
Translates to: NSTHLRIYLEWKCQVILQMLSWW*IGIHWD
Trigger: GTCCCAATGAATCCCAATTCACCACCACGACAACAT...TTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAAATGAGTAGAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR TCA 90 bp CTAAATTGCTTGATTATGTCAGAAAGGTCCTTTGACTTCAACTCTACTCATTTGTTTTTGGGCTGGACCTaGAGCCCATATGAGCAGGAG +
Preference number: 4 (lower is better)
Translates to: LNCLIMSERSFDFNSTHLFLGWT*SPYEQE
Trigger: CTCCTGCTCATATGGGCTTCAGGTCCAGCCCAAAAA...CAAATGAGTAGAGTTGAAGTCAAAGGACCTTTCTGACATAATCAAGCAATTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR TCA 90 bp TTGTTCAGATACCACAAAGCACCACTTAAGTCTAAATTGCTTGATTATGTCAGACAACAGTTAGAGGTCTaGATGGAGGGGGTCATGCCT +
Preference number: 4 (lower is better)
Translates to: LFRYHKAPLKSKLLDYVRQQLEV*MEGVMP
Trigger: AGGCATGACCCCCTCCATTCAGACCTCTAACTGTTG...TCTGACATAATCAAGCAATTTAGACTTAAGTGGTGCTTTGTGGTATCTGAACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262995.8
CDS-3UTR TCA 90 bp AACTCTACTCATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAAAGTGGACCAAAGTGCTaGCTTACAGCAATTGTTGGG +
Preference number: 4 (lower is better)
Translates to: NSTHLRIYLEWKCQVILQSGPKC*LTAIVG
Trigger: CCCAACAATTGCTGTAAGTCAGCACTTTGGTCCACT...TTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAAATGAGTAGAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262995.8
CDS-3UTR GCA 90 bp AGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAAAAGGGATTTATCTTTCTCCTCCTCGCTGTCTaGTACCAAGTAGAAAATCCG +
Preference number: 4 (lower is better)
Translates to: RIYLEWKCQVILQKGFIFLLLAV*YQVENP
Trigger: CGGATTTTCTACTTGGTAGCAGACAGCGAGGAGGAG...AAAGATAAATCCCTTTTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR GCA 90 bp TTGATTATGTCAGAAAGGTCCTTTGACTTCAACTCTACTCATTTGAGGATCTACCTCCTCCTCGCTGTCTaGTACCAAGTAGAAAATCCG +
Preference number: 4 (lower is better)
Translates to: LIMSERSFDFNSTHLRIYLLLAV*YQVENP
Trigger: CGGATTTTCTACTTGGTAGCAGACAGCGAGGAGGAG...GTAGATCCTCAAATGAGTAGAGTTGAAGTCAAAGGACCTTTCTGACATAATCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR GCA 90 bp GAAAATAATCTTGAAGAAGATAGCCTCACCCTACCCAAACTTCCCAAATATGATGTGCTTGTAAAGAGCTaGCAGGTGGCTTCACAGGAT +
Preference number: 4 (lower is better)
Translates to: ENNLEEDSLTLPKLPKYDVLVKS*QVASQD
Trigger: ATCCTGTGAAGCCACCTGGCAGCTCTTTACAAGCAC...ATCATATTTGGGAAGTTTGGGTAGGGTGAGGCTATCTTCTTCAAGATTATTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262995.8
CDS-3UTR GCA 90 bp TTGATTATGTCAGAAAGGTCCTTTGACTTCAACTCTACTCATTTGAGGATCTACGAGGATCCTCCTGAATaGCAAGAGTTTCCAGGTGTG +
Preference number: 4 (lower is better)
Translates to: LIMSERSFDFNSTHLRIYEDPPE*QEFPGV
Trigger: CACACCTGGAAACTCTTGGCATTCAGGAGGATCCTC...GTAGATCCTCAAATGAGTAGAGTTGAAGTCAAAGGACCTTTCTGACATAATCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
ENST00000512843.1
CDS-3UTR GCA 90 bp GAAAGGTCCTTTGACTTCAACTCTACTCATTTGAGGATCTACCTAGAGTGGAAGAGAAGAGGTGGATTTTaGAGAATCAGCATGCGTTCT +
Preference number: 4 (lower is better)
Translates to: ERSFDFNSTHLRIYLEWKRRGGF*RISMRS
Trigger: AGAACGCATGCTGATTCTGCAAAATCCACCTCTTCT...CTTCCACTCTAGGTAGATCCTCAAATGAGTAGAGTTGAAGTCAAAGGACCTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR GCA 90 bp ATGTCAGAAAGGTCCTTTGACTTCAACTCTACTCATTTGAGGATCTACCTAGAGCATTCATTCCATGTTTaGTCTGGGAGGAAGCAGGAT +
Preference number: 4 (lower is better)
Translates to: MSERSFDFNSTHLRIYLEHSFHV*SGRKQD
Trigger: ATCCTGCTTCCTCCCAGAGCAAACATGGAATGAATG...CTCTAGGTAGATCCTCAAATGAGTAGAGTTGAAGTCAAAGGACCTTTCTGACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR GCA 90 bp TTGTTCAGATACCACAAAGCACCACTTAAGTCTAAATTGCTTGATTATGTCAGACAGTGTCTGAGGCGGTaGGTGGGATACTACACGTTT +
Preference number: 4 (lower is better)
Translates to: LFRYHKAPLKSKLLDYVRQCLRR*VGYYTF
Trigger: AAACGTGTAGTATCCCACGCACCGCCTCAGACACTG...TCTGACATAATCAAGCAATTTAGACTTAAGTGGTGCTTTGTGGTATCTGAACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR GCA 90 bp TTGATTATGTCAGAAAGGTCCTTTGACTTCAACTCTACTCATTTGAGGATCTACCTTGAAGTTGTGCTATaGACTGAATCTGGTCGGGGG +
Preference number: 4 (lower is better)
Translates to: LIMSERSFDFNSTHLRIYLEVVL*TESGRG
Trigger: CCCCCGACCAGATTCAGTGCATAGCACAACTTCAAG...GTAGATCCTCAAATGAGTAGAGTTGAAGTCAAAGGACCTTTCTGACATAATCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR GCA 90 bp GTTAACTGTGGAACAAATGTTTCTCTGGGAGCTAAACAATACTATTTTCCCACAGAGCCACTGCTCTTTTaGTTACGTGGTGGTGTGGAT +
Preference number: 4 (lower is better)
Translates to: VNCGTNVSLGAKQYYFPTEPLLF*LRGGVD
Trigger: ATCCACACCACCACGTAAGCAAAAGAGCAGTGGCTC...TGTGGGAAAATAGTATTGTTTAGCTCCCAGAGAAACATTTGTTCCACAGTTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CCA 90 bp TTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAAAAGGGATTTATCATCTGCCTGGGTGGATaGTGGTGCTGTATTTATAGC +
Preference number: 4 (lower is better)
Translates to: LRIYLEWKCQVILQKGFIICLGG*WCCIYS
Trigger: GCTATAAATACAGCACCACCATCCACCCAGGCAGAT...GATAAATCCCTTTTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
ENST00000512843.1
CDS-3UTR CCA 90 bp TGCTTGATTATGTCAGAAAGGTCCTTTGACTTCAACTCTACTCATTTGAGGATCATCTGCCTGGGTGGATaGTGGTGCTGTATTTATAGC +
Preference number: 4 (lower is better)
Translates to: CLIMSERSFDFNSTHLRIICLGG*WCCIYS
Trigger: GCTATAAATACAGCACCACCATCCACCCAGGCAGAT...GATCCTCAAATGAGTAGAGTTGAAGTCAAAGGACCTTTCTGACATAATCAAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
ENST00000512843.1
CDS-3UTR CCA 90 bp CATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAAAAGGGATTTATCTGCCTGGGTGGATaGTGGTGCTGTATTTATAGC +
Preference number: 4 (lower is better)
Translates to: HLRIYLEWKCQVILQKGFICLGG*WCCIYS
Trigger: GCTATAAATACAGCACCACCATCCACCCAGGCAGAT...AAATCCCTTTTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
ENST00000512843.1
CDS-3UTR CCA 90 bp ACTCATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAAAAGGGAATGAATCTGCCTGGGTaGATGGTGGTGCTGTATTTA +
Preference number: 4 (lower is better)
Translates to: THLRIYLEWKCQVILQKGMNLPG*MVVLYL
Trigger: TAAATACAGCACCACCATCCACCCAGGCAGATTCAT...TCCCTTTTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAAATGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
ENST00000512843.1
CDS-3UTR CCA 90 bp AGTGTGTTAACTGTGGAACAAATGTTTCTCTGGGAGCTAAACAATACTATTTTCGAGGATGAATCTGCCTaGGTGGATGGTGGTGCTGTA +
Preference number: 4 (lower is better)
Translates to: SVLTVEQMFLWELNNTIFEDESA*VDGGAV
Trigger: TACAGCACCACCATCCACCCAGGCAGATTCATCCTC...GAAAATAGTATTGTTTAGCTCCCAGAGAAACATTTGTTCCACAGTTAACACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CCA 90 bp AGTCTAAATTGCTTGATTATGTCAGAAAGGTCCTTTGACTTCAACTCTACTCATCAGCATGCGTTCTGGTaGGTTCGGGCTTCTTGCTTT +
Preference number: 4 (lower is better)
Translates to: SLNCLIMSERSFDFNSTHQHAFW*VRASCF
Trigger: AAAGCAAGAAGCCCGAACCCACCAGAACGCATGCTG...ATGAGTAGAGTTGAAGTCAAAGGACCTTTCTGACATAATCAAGCAATTTAGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CCA 90 bp ATGTCAGAAAGGTCCTTTGACTTCAACTCTACTCATTTGAGGATCTACCTAGAGTCCCAAGGTTCCTTCTaGAAATGTTCGTGGAATCTG +
Preference number: 4 (lower is better)
Translates to: MSERSFDFNSTHLRIYLESQGSF*KCSWNL
Trigger: CAGATTCCACGAACATTTCCAGAAGGAACCTTGGGA...CTCTAGGTAGATCCTCAAATGAGTAGAGTTGAAGTCAAAGGACCTTTCTGACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CCA 90 bp AACTCTACTCATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAATTTCGGTGGCCGAGGTaGAGGAATATCTGGAATAGT +
Preference number: 4 (lower is better)
Translates to: NSTHLRIYLEWKCQVILQFRWPR*RNIWNS
Trigger: ACTATTCCAGATATTCCTCCACCTCGGCCACCGAAA...TTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAAATGAGTAGAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CCA 90 bp AGTCTAAATTGCTTGATTATGTCAGAAAGGTCCTTTGACTTCAACTCTACTCATTGGATGTGGTTTCGGTaGCCGAGGTGGAGGAATATC +
Preference number: 4 (lower is better)
Translates to: SLNCLIMSERSFDFNSTHWMWFR*PRWRNI
Trigger: GATATTCCTCCACCTCGGCCACCGAAACCACATCCA...ATGAGTAGAGTTGAAGTCAAAGGACCTTTCTGACATAATCAAGCAATTTAGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CCA 90 bp TTGTTCAGATACCACAAAGCACCACTTAAGTCTAAATTGCTTGATTATGTCAGATGGATGTGGTTTCGGTaGCCGAGGTGGAGGAATATC +
Preference number: 4 (lower is better)
Translates to: LFRYHKAPLKSKLLDYVRWMWFR*PRWRNI
Trigger: GATATTCCTCCACCTCGGCCACCGAAACCACATCCA...TCTGACATAATCAAGCAATTTAGACTTAAGTGGTGCTTTGTGGTATCTGAACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CCA 90 bp CTTCAACTCTACTCATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTGTCGTGGTGGTGAATTaGGATTCATTGGGACGTAAT +
Preference number: 4 (lower is better)
Translates to: LQLYSFEDLPRVEVSSHSVVVVN*DSLGRN
Trigger: ATTACGTCCCAATGAATCCCAATTCACCACCACGAC...AGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAAATGAGTAGAGTTGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CCA 90 bp AGTCTAAATTGCTTGATTATGTCAGAAAGGTCCTTTGACTTCAACTCTACTCATGTCTGCAACAGGAACTaGCCTTCTGGGAGGGGTTTT +
Preference number: 4 (lower is better)
Translates to: SLNCLIMSERSFDFNSTHVCNRN*PSGRGF
Trigger: AAAACCCCTCCCAGAAGGCCAGTTCCTGTTGCAGAC...ATGAGTAGAGTTGAAGTCAAAGGACCTTTCTGACATAATCAAGCAATTTAGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CCA 90 bp GACTTCAACTCTACTCATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTGACTTTTCTGTCTaGCTTGAGGTTCCTATCCAC +
Preference number: 4 (lower is better)
Translates to: DFNSTHLRIYLEWKCQVILDFSV*LEVPIH
Trigger: GTGGATAGGAACCTCAAGCCAGACAGAAAAGTCAAG...AATGACTTGACACTTCCACTCTAGGTAGATCCTCAAATGAGTAGAGTTGAAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262994.8
ENST00000505913.5
CDS-3UTR CCA 90 bp CATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAAAAGGGATTTGCTCTTTTGCTTACGTaGTGGTGTGGATTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: HLRIYLEWKCQVILQKGFALLLT*WCGFPR
Trigger: TCTGGGAAATCCACACCACCACGTAAGCAAAAGAGC...AAATCCCTTTTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CCA 90 bp GTTAACTGTGGAACAAATGTTTCTCTGGGAGCTAAACAATACTATTTTCCCACAGTCATGCCTCAACTGTaGGCACTCCTTTCTCTATGC +
Preference number: 4 (lower is better)
Translates to: VNCGTNVSLGAKQYYFPTVMPQL*ALLSLC
Trigger: GCATAGAGAAAGGAGTGCCCACAGTTGAGGCATGAC...TGTGGGAAAATAGTATTGTTTAGCTCCCAGAGAAACATTTGTTCCACAGTTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262995.8
CDS-3UTR CCA 90 bp GACTTCAACTCTACTCATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTGTTCCAAGCACCTCATaGAACACAAAATCAGAGGAG +
Preference number: 4 (lower is better)
Translates to: DFNSTHLRIYLEWKCQVIVPSTS*NTKSEE
Trigger: CTCCTCTGATTTTGTGTTCCATGAGGTGCTTGGAAC...AATGACTTGACACTTCCACTCTAGGTAGATCCTCAAATGAGTAGAGTTGAAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262995.8
CDS-3UTR CCA 90 bp CTAAATTGCTTGATTATGTCAGAAAGGTCCTTTGACTTCAACTCTACTCATTTGTTTCACACTCTTCGCTaGCGTTTCTGGTGGGTTCGG +
Preference number: 4 (lower is better)
Translates to: LNCLIMSERSFDFNSTHLFHTLR*RFWWVR
Trigger: CCGAACCCACCAGAAACGCCAGCGAAGAGTGTGAAA...CAAATGAGTAGAGTTGAAGTCAAAGGACCTTTCTGACATAATCAAGCAATTTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512843.1
CDS-3UTR TCA 90 bp ACTCATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAAAAGGGAGGAACATTGATTAGCTaGTATGGAGGAGGTAGAGTA +
Preference number: 4 (lower is better)
Translates to: THLRIYLEWKCQVILQKGGTLIS*YGGGRV
Trigger: TACTCTACCTCCTCCATATCAGCTAATCAATGTTCC...TCCCTTTTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAAATGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
ENST00000512843.1
CDS-3UTR TCA 90 bp AGAACTCCCAAAGGAATTATGGTAAGGTACATTGGGAAAACCCAGAACAATGTTGATACATGCCTCATTTaGGTCTCTACACTCGATGTC +
Preference number: 4 (lower is better)
Translates to: RTPKGIMVRYIGKTQNNVDTCLI*VSTLDV
Trigger: GACATCGAGTGTAGAGACTCAAATGAGGCATGTATC...AACATTGTTCTGGGTTTTCCCAATGTACCTTACCATAATTCCTTTGGGAGTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262995.8
ENST00000505913.5
CDS-3UTR TCA 90 bp GAAAATAATCTTGAAGAAGATAGCCTCACCCTACCCAAACTTCCCAAATATGATAATGGTATTACTACGTaGAGGCGACATCCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: ENNLEEDSLTLPKLPKYDNGITT*RRHPCC
Trigger: ACAGCAGGGATGTCGCCTTCACGTAGTAATACCATT...ATCATATTTGGGAAGTTTGGGTAGGGTGAGGCTATCTTCTTCAAGATTATTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262995.8
CDS-3UTR TCA 90 bp TACTCATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAAAAGGGATGGAAGCCTTCAAGTaGACTAGATCTATCACTTGG +
Preference number: 4 (lower is better)
Translates to: YSFEDLPRVEVSSHSSKGMEAFK*TRSITW
Trigger: CCAAGTGATAGATCTAGTTCACTTGAAGGCTTCCAT...CCCTTTTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAAATGAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR TCA 90 bp CTTCAACTCTACTCATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTATGGAAGCCTTCAAGTaGACTAGATCTATCACTTGG +
Preference number: 4 (lower is better)
Translates to: LQLYSFEDLPRVEVSSHSMEAFK*TRSITW
Trigger: CCAAGTGATAGATCTAGTTCACTTGAAGGCTTCCAT...AGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAAATGAGTAGAGTTGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR TCA 90 bp ACTCATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAAAAGGGAATCCAGTTCTTCACTTaGAACACTTCCCACTGTCAA +
Preference number: 4 (lower is better)
Translates to: THLRIYLEWKCQVILQKGIQFFT*NTSHCQ
Trigger: TTGACAGTGGGAAGTGTTTCAAGTGAAGAACTGGAT...TCCCTTTTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAAATGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR TCA 90 bp AATACTACGAGTGTGTTAACTGTGGAACAAATGTTTCTCTGGGAGCTAAACAATATGTTGTCGTGGTGGTaGATTGGGATTCATTGGGAC +
Preference number: 4 (lower is better)
Translates to: NTTSVLTVEQMFLWELNNMLSWW*IGIHWD
Trigger: GTCCCAATGAATCCCAATTCACCACCACGACAACAT...ATTGTTTAGCTCCCAGAGAAACATTTGTTCCACAGTTAACACACTCGTAGTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262995.8
ENST00000505913.5
CDS-3UTR TCA 90 bp AGACAGAATTATACCATCCCTCTGGTGTTTTCAGAAATCTGGTTGGAAGGAGTCGTCAGAAAGGTCCTTTaGCTTCAACTCTACTCATTT +
Preference number: 4 (lower is better)
Translates to: RQNYTIPLVFSEIWLEGVVRKVL*LQLYSF
Trigger: AAATGAGTAGAGTTGAAGTCAAAGGACCTTTCTGAC...GACTCCTTCCAACCAGATTTCTGAAAACACCAGAGGGATGGTATAATTCTGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262995.8
CDS-3UTR GCA 90 bp AGTCTAAATTGCTTGATTATGTCAGAAAGGTCCTTTGACTTCAACTCTACTCATCAGTTAAACGGCCACTaGGTAACACGAACCATCTCC +
Preference number: 4 (lower is better)
Translates to: SLNCLIMSERSFDFNSTHQLNGH*VTRTIS
Trigger: GGAGATGGTTCGTGTTACGCAGTGGCCGTTTAACTG...ATGAGTAGAGTTGAAGTCAAAGGACCTTTCTGACATAATCAAGCAATTTAGACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR GCA 90 bp GACTTCAACTCTACTCATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTAAGGGACGTTATCATTaGAGTCTGTTTCAGAAGAGG +
Preference number: 4 (lower is better)
Translates to: DFNSTHLRIYLEWKCQVIKGRYH*SLFQKR
Trigger: CCTCTTCTGAAACAGACTGCAATGATAACGTCCCTT...AATGACTTGACACTTCCACTCTAGGTAGATCCTCAAATGAGTAGAGTTGAAGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR GCA 90 bp CTTCAACTCTACTCATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTAAGGGACGTTATCATTaGAGTCTGTTTCAGAAGAGG +
Preference number: 4 (lower is better)
Translates to: LQLYSFEDLPRVEVSSHSKGRYH*SLFQKR
Trigger: CCTCTTCTGAAACAGACTGCAATGATAACGTCCCTT...AGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAAATGAGTAGAGTTGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR GCA 90 bp AGTCTAAATTGCTTGATTATGTCAGAAAGGTCCTTTGACTTCAACTCTACTCATCTTGAAGTTGTGCTATaGACTGAATCTGGTCGGGGG +
Preference number: 4 (lower is better)
Translates to: SLNCLIMSERSFDFNSTHLEVVL*TESGRG
Trigger: CCCCCGACCAGATTCAGTGCATAGCACAACTTCAAG...ATGAGTAGAGTTGAAGTCAAAGGACCTTTCTGACATAATCAAGCAATTTAGACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR GCA 90 bp GAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAAAAGGGATTTATCTTTGTCGTGTGAGTCACTaGTTGAAGTTGTGCTATGCA +
Preference number: 4 (lower is better)
Translates to: EDLPRVEVSSHSSKGIYLCRVSH*LKLCYA
Trigger: TGCATAGCACAACTTCAAGCAGTGACTCACACGACA...AAGATAAATCCCTTTTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR GCA 90 bp AACTCTACTCATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAATGTCGTGTGAGTCACTaGTTGAAGTTGTGCTATGCA +
Preference number: 4 (lower is better)
Translates to: NSTHLRIYLEWKCQVILQCRVSH*LKLCYA
Trigger: TGCATAGCACAACTTCAAGCAGTGACTCACACGACA...TTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAAATGAGTAGAGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR GCA 90 bp CTAAATTGCTTGATTATGTCAGAAAGGTCCTTTGACTTCAACTCTACTCATTTGGAGCCACTGCTCTTTTaGTTACGTGGTGGTGTGGAT +
Preference number: 4 (lower is better)
Translates to: LNCLIMSERSFDFNSTHLEPLLF*LRGGVD
Trigger: ATCCACACCACCACGTAAGCAAAAGAGCAGTGGCTC...CAAATGAGTAGAGTTGAAGTCAAAGGACCTTTCTGACATAATCAAGCAATTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR GCA 90 bp TCCTTTGACTTCAACTCTACTCATTTGAGGATCTACCTAGAGTGGAAGTGTCAATTTTACACAATAAAATaGTGGCAGCACTGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: SFDFNSTHLRIYLEWKCQFYTIK*WQHWLA
Trigger: AGCCAGCCAGTGCTGCCAGCATTTTATTGTGTAAAA...TTGACACTTCCACTCTAGGTAGATCCTCAAATGAGTAGAGTTGAAGTCAAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262995.8
CDS-3UTR CCA 90 bp CATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAAAAGGGATTTATGAATCTGCCTGGGTaGATGGTGGTGCTGTATTTA +
Preference number: 4 (lower is better)
Translates to: HLRIYLEWKCQVILQKGFMNLPG*MVVLYL
Trigger: TAAATACAGCACCACCATCCACCCAGGCAGATTCAT...AAATCCCTTTTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
ENST00000512843.1
CDS-3UTR CCA 90 bp GAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAAAAGGGATTTATCTTGCAGGTTATAAAGGCTaGAGTCAACTGAAGCAGATG +
Preference number: 4 (lower is better)
Translates to: EDLPRVEVSSHSSKGIYLAGYKG*SQLKQM
Trigger: CATCTGCTTCAGTTGACTCCAGCCTTTATAACCTGC...AAGATAAATCCCTTTTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CCA 90 bp TACTACGAGTGTGTTAACTGTGGAACAAATGTTTCTCTGGGAGCTAAACAATACGCAGGTTATAAAGGCTaGAGTCAACTGAAGCAGATG +
Preference number: 4 (lower is better)
Translates to: YYECVNCGTNVSLGAKQYAGYKG*SQLKQM
Trigger: CATCTGCTTCAGTTGACTCCAGCCTTTATAACCTGC...GTATTGTTTAGCTCCCAGAGAAACATTTGTTCCACAGTTAACACACTCGTAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CCA 90 bp TACTCATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAAAAGGGAATCCACAGTGGAAATaGTATTACTACGTGAAGGCG +
Preference number: 4 (lower is better)
Translates to: YSFEDLPRVEVSSHSSKGNPQWK*YYYVKA
Trigger: CGCCTTCACGTAGTAATACCATTTCCACTGTGGATT...CCCTTTTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAAATGAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CCA 90 bp GAAAGGTCCTTTGACTTCAACTCTACTCATTTGAGGATCTACCTAGAGTGGAAGACTTGGAAATGCTCGTaGAATATCATAGCAGTCTTG +
Preference number: 4 (lower is better)
Translates to: ERSFDFNSTHLRIYLEWKTWKCS*NIIAVL
Trigger: CAAGACTGCTATGATATTCCACGAGCATTTCCAAGT...CTTCCACTCTAGGTAGATCCTCAAATGAGTAGAGTTGAAGTCAAAGGACCTTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CCA 90 bp TTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAAAAGGGATTTATCACTGCCAAAGAGATTTaGGTCTTCACTGGACAGGTT +
Preference number: 4 (lower is better)
Translates to: LRIYLEWKCQVILQKGFITAKEI*VFTGQV
Trigger: AACCTGTCCAGTGAAGACCCAAATCTCTTTGGCAGT...GATAAATCCCTTTTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CCA 90 bp GAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAAAAGGGATTTATCTTACTGCCAAAGAGATTTaGGTCTTCACTGGACAGGTT +
Preference number: 4 (lower is better)
Translates to: EDLPRVEVSSHSSKGIYLTAKEI*VFTGQV
Trigger: AACCTGTCCAGTGAAGACCCAAATCTCTTTGGCAGT...AAGATAAATCCCTTTTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CCA 90 bp TCATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAAAAGGGATTACTGCCAAAGAGATTTaGGTCTTCACTGGACAGGTT +
Preference number: 4 (lower is better)
Translates to: SFEDLPRVEVSSHSSKGITAKEI*VFTGQV
Trigger: AACCTGTCCAGTGAAGACCCAAATCTCTTTGGCAGT...AATCCCTTTTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CCA 90 bp TCATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAAAAGGGATTGCTTACGTGGTGGTGTaGATTTCCCAGAATCTAAGT +
Preference number: 4 (lower is better)
Translates to: SFEDLPRVEVSSHSSKGIAYVVV*ISQNLS
Trigger: ACTTAGATTCTGGGAAATCCACACCACCACGTAAGC...AATCCCTTTTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CCA 90 bp TTGATTATGTCAGAAAGGTCCTTTGACTTCAACTCTACTCATTTGAGGATCTACTACACAATAAAATGCTaGCAGCACTGGCTGGCTGGA +
Preference number: 4 (lower is better)
Translates to: LIMSERSFDFNSTHLRIYYTIKC*QHWLAG
Trigger: TCCAGCCAGCCAGTGCTGCCAGCATTTTATTGTGTA...GTAGATCCTCAAATGAGTAGAGTTGAAGTCAAAGGACCTTTCTGACATAATCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262995.8
CDS-3UTR TCA 90 bp TCATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAAAAGGGATTGGAACATTGATTAGCTaGTATGGAGGAGGTAGAGTA +
Preference number: 4 (lower is better)
Translates to: SFEDLPRVEVSSHSSKGIGTLIS*YGGGRV
Trigger: TACTCTACCTCCTCCATATCAGCTAATCAATGTTCC...AATCCCTTTTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
ENST00000512843.1
CDS-3UTR TCA 90 bp TACTACGAGTGTGTTAACTGTGGAACAAATGTTTCTCTGGGAGCTAAACAATACGGAACATTGATTAGCTaGTATGGAGGAGGTAGAGTA +
Preference number: 4 (lower is better)
Translates to: YYECVNCGTNVSLGAKQYGTLIS*YGGGRV
Trigger: TACTCTACCTCCTCCATATCAGCTAATCAATGTTCC...GTATTGTTTAGCTCCCAGAGAAACATTTGTTCCACAGTTAACACACTCGTAGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262995.8
ENST00000505913.5
CDS-3UTR TCA 90 bp AGTGTGTTAACTGTGGAACAAATGTTTCTCTGGGAGCTAAACAATACTATTTTCGGTGTGGTGGAACATTaGTTAGCTGATATGGAGGAG +
Preference number: 4 (lower is better)
Translates to: SVLTVEQMFLWELNNTIFGVVEH*LADMEE
Trigger: CTCCTCCATATCAGCTAATCAATGTTCCACCACACC...GAAAATAGTATTGTTTAGCTCCCAGAGAAACATTTGTTCCACAGTTAACACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR TCA 90 bp TCCTTTGACTTCAACTCTACTCATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGAAGCAGGATTTTTATaGGAAGGGACGTTATCATTG +
Preference number: 4 (lower is better)
Translates to: SFDFNSTHLRIYLEWKCQEAGFL*EGTLSL
Trigger: CAATGATAACGTCCCTTCTCATAAAAATCCTGCTTC...TTGACACTTCCACTCTAGGTAGATCCTCAAATGAGTAGAGTTGAAGTCAAAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR TCA 90 bp AACTCTACTCATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAAATCCAGTTCTTCACTTaGAACACTTCCCACTGTCAA +
Preference number: 4 (lower is better)
Translates to: NSTHLRIYLEWKCQVILQIQFFT*NTSHCQ
Trigger: TTGACAGTGGGAAGTGTTTCAAGTGAAGAACTGGAT...TTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAAATGAGTAGAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR TCA 90 bp CTTCAACTCTACTCATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTGTCAGAAAGGTCCTTTaGCTTCAACTCTACTCATTT +
Preference number: 4 (lower is better)
Translates to: LQLYSFEDLPRVEVSSHSVRKVL*LQLYSF
Trigger: AAATGAGTAGAGTTGAAGTCAAAGGACCTTTCTGAC...AGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAAATGAGTAGAGTTGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
ENST00000512843.1
CDS-3UTR TCA 90 bp TACTCATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAAAAGGGGACCAATCAGTTTGCTaGAACTCTGTTAACAGAGAT +
Preference number: 4 (lower is better)
Translates to: YSFEDLPRVEVSSHSSKGDQSVC*NSVNRD
Trigger: ATCTCTGTTAACAGAGTTTCAGCAAACTGATTGGTC...CCCTTTTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAAATGAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262995.8
CDS-3UTR TCA 90 bp AACTCCCAAAGGAATTATGGTAAGGTACATTGGGAAAACCCAGAACAATGTTTTGTTGCAGAAAATGAGTaGCATATAGAGGTGGGACTG +
Preference number: 4 (lower is better)
Translates to: NSQRNYGKVHWENPEQCFVAENE*HIEVGL
Trigger: CAGTCCCACCTCTATATGTCACTCATTTTCTGCAAC...AAAACATTGTTCTGGGTTTTCCCAATGTACCTTACCATAATTCCTTTGGGAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262995.8
CDS-3UTR TCA 90 bp TCATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAAAAGGGATTCTTTGTTGCAGAAAATaGGTGACATATAGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: SFEDLPRVEVSSHSSKGILCCRK*VTYRGG
Trigger: CCCACCTCTATATGTCACTCATTTTCTGCAACAAAG...AATCCCTTTTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262995.8
CDS-3UTR GCA 90 bp TACTACGAGTGTGTTAACTGTGGAACAAATGTTTCTCTGGGAGCTAAACAATACAGAAGAGGTGGATTTTaGAGAATCAGCATGCGTTCT +
Preference number: 4 (lower is better)
Translates to: YYECVNCGTNVSLGAKQYRRGGF*RISMRS
Trigger: AGAACGCATGCTGATTCTGCAAAATCCACCTCTTCT...GTATTGTTTAGCTCCCAGAGAAACATTTGTTCCACAGTTAACACACTCGTAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262995.8
ENST00000505913.5
CDS-3UTR GCA 90 bp TTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAAAAGGGATTTATCATTCATTCCATGTTTaGTCTGGGAGGAAGCAGGAT +
Preference number: 4 (lower is better)
Translates to: FEDLPRVEVSSHSSKGIYHSFHV*SGRKQD
Trigger: ATCCTGCTTCCTCCCAGAGCAAACATGGAATGAATG...ATAAATCCCTTTTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR GCA 90 bp TTGATTATGTCAGAAAGGTCCTTTGACTTCAACTCTACTCATTTGAGGATCTACCATTCATTCCATGTTTaGTCTGGGAGGAAGCAGGAT +
Preference number: 4 (lower is better)
Translates to: LIMSERSFDFNSTHLRIYHSFHV*SGRKQD
Trigger: ATCCTGCTTCCTCCCAGAGCAAACATGGAATGAATG...GTAGATCCTCAAATGAGTAGAGTTGAAGTCAAAGGACCTTTCTGACATAATCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR GCA 90 bp AATACTACGAGTGTGTTAACTGTGGAACAAATGTTTCTCTGGGAGCTAAACAATTGTCGTGTGAGTCACTaGTTGAAGTTGTGCTATGCA +
Preference number: 4 (lower is better)
Translates to: NTTSVLTVEQMFLWELNNCRVSH*LKLCYA
Trigger: TGCATAGCACAACTTCAAGCAGTGACTCACACGACA...ATTGTTTAGCTCCCAGAGAAACATTTGTTCCACAGTTAACACACTCGTAGTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262995.8
ENST00000505913.5
CDS-3UTR GCA 90 bp ACTCATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAAAAGGGATGGAAAAGCAACAGGTaGTACATACGAGAATCACTT +
Preference number: 4 (lower is better)
Translates to: THLRIYLEWKCQVILQKGWKSNR*YIRESL
Trigger: AAGTGATTCTCGTATGTAGCACCTGTTGCTTTTCCA...TCCCTTTTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAAATGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262995.8
CDS-3UTR GCA 90 bp ACTCATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAAAAGGGATACCACACTGGAGACTaGTTATGTATTAACTTCCAC +
Preference number: 4 (lower is better)
Translates to: THLRIYLEWKCQVILQKGYHTGD*LCINFH
Trigger: GTGGAAGTTAATACATAAGCAGTCTCCAGTGTGGTA...TCCCTTTTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAAATGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262995.8
CDS-3UTR GCA 90 bp TTGTTCAGATACCACAAAGCACCACTTAAGTCTAAATTGCTTGATTATGTCAGATGTCACGGACCTGATTaGTTACTTGACAGTGGAGGA +
Preference number: 4 (lower is better)
Translates to: LFRYHKAPLKSKLLDYVRCHGPD*LLDSGG
Trigger: TCCTCCACTGTCAAGTAAGCAATCAGGTCCGTGACA...TCTGACATAATCAAGCAATTTAGACTTAAGTGGTGCTTTGTGGTATCTGAACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262995.8
CDS-3UTR CCA 90 bp TTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAAAAGGGATTTATATGAATCTGCCTGGGTaGATGGTGGTGCTGTATTTA +
Preference number: 4 (lower is better)
Translates to: FEDLPRVEVSSHSSKGIYMNLPG*MVVLYL
Trigger: TAAATACAGCACCACCATCCACCCAGGCAGATTCAT...ATAAATCCCTTTTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
ENST00000512843.1
CDS-3UTR CCA 90 bp CTAAATTGCTTGATTATGTCAGAAAGGTCCTTTGACTTCAACTCTACTCATTTGTTTCGGTGGCCGAGGTaGAGGAATATCTGGAATAGT +
Preference number: 4 (lower is better)
Translates to: LNCLIMSERSFDFNSTHLFRWPR*RNIWNS
Trigger: ACTATTCCAGATATTCCTCCACCTCGGCCACCGAAA...CAAATGAGTAGAGTTGAAGTCAAAGGACCTTTCTGACATAATCAAGCAATTTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CCA 90 bp GACTTCAACTCTACTCATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTTTCACTGGACAGGTTTaGGTTCATGGGAACATAATT +
Preference number: 4 (lower is better)
Translates to: DFNSTHLRIYLEWKCQVIFTGQV*VHGNII
Trigger: AATTATGTTCCCATGAACCCAAACCTGTCCAGTGAA...AATGACTTGACACTTCCACTCTAGGTAGATCCTCAAATGAGTAGAGTTGAAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CCA 90 bp AATTGCTTGATTATGTCAGAAAGGTCCTTTGACTTCAACTCTACTCATTTGAGGGCTTACGTGGTGGTGTaGATTTCCCAGAATCTAAGT +
Preference number: 4 (lower is better)
Translates to: NCLIMSERSFDFNSTHLRAYVVV*ISQNLS
Trigger: ACTTAGATTCTGGGAAATCCACACCACCACGTAAGC...CCTCAAATGAGTAGAGTTGAAGTCAAAGGACCTTTCTGACATAATCAAGCAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CCA 90 bp TTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAAAAGGGATTTATCTTTTGCTTACGTGGTaGTGTGGATTTCCCAGAATC +
Preference number: 4 (lower is better)
Translates to: FEDLPRVEVSSHSSKGIYLLLTW*CGFPRI
Trigger: GATTCTGGGAAATCCACACCACCACGTAAGCAAAAG...ATAAATCCCTTTTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CCA 90 bp AGTCTAAATTGCTTGATTATGTCAGAAAGGTCCTTTGACTTCAACTCTACTCATGCTCTTTTGCTTACGTaGTGGTGTGGATTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: SLNCLIMSERSFDFNSTHALLLT*WCGFPR
Trigger: TCTGGGAAATCCACACCACCACGTAAGCAAAAGAGC...ATGAGTAGAGTTGAAGTCAAAGGACCTTTCTGACATAATCAAGCAATTTAGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CCA 90 bp AGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAAAAGGGATTTATCTTTTTGACCTTTTCTGTCTaGCTTGAGGTTCCTATCCAC +
Preference number: 4 (lower is better)
Translates to: RIYLEWKCQVILQKGFIFLTFSV*LEVPIH
Trigger: GTGGATAGGAACCTCAAGCCAGACAGAAAAGGTCAA...AAAGATAAATCCCTTTTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262995.8
CDS-3UTR CCA 90 bp AGAACTCCCAAAGGAATTATGGTAAGGTACATTGGGAAAACCCAGAACAATGTTGTGTTTTCAGAAATCTaGTTGGAAGGAGTCCATGAC +
Preference number: 4 (lower is better)
Translates to: RTPKGIMVRYIGKTQNNVVFSEI*LEGVHD
Trigger: GTCATGGACTCCTTCCAACCAGATTTCTGAAAACAC...AACATTGTTCTGGGTTTTCCCAATGTACCTTACCATAATTCCTTTGGGAGTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262995.8
3UTR CAA 72 bp ATGTCAGAAAGGTCCTTTGACTTCAACTCTACTCATTaGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATT +
Preference number: 4 (lower is better)
Translates to: MSERSFDFNSTH*RIYLEWKCQVI
Trigger: AATGACTTGACACTTCCACTCTAGGTAGATCCTCAAATGAGTAGAGTTGAAGTCAAAGGACCTTTCTGACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
ENST00000512843.1
CDS-3UTR TCA 90 bp TCATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAAAAGGGATTGAAGCAGGATTTTTATaGGAAGGGACGTTATCATTG +
Preference number: 4 (lower is better)
Translates to: SFEDLPRVEVSSHSSKGIEAGFL*EGTLSL
Trigger: CAATGATAACGTCCCTTCTCATAAAAATCCTGCTTC...AATCCCTTTTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAAATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR TCA 90 bp TTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAAAAGGGATTTATCGAAGCAGGATTTTTATaGGAAGGGACGTTATCATTG +
Preference number: 4 (lower is better)
Translates to: LRIYLEWKCQVILQKGFIEAGFL*EGTLSL
Trigger: CAATGATAACGTCCCTTCTCATAAAAATCCTGCTTC...GATAAATCCCTTTTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR TCA 90 bp TCATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAAAAGGGATTGTCAGAAAGGTCCTTTaGCTTCAACTCTACTCATTT +
Preference number: 4 (lower is better)
Translates to: SFEDLPRVEVSSHSSKGIVRKVL*LQLYSF
Trigger: AAATGAGTAGAGTTGAAGTCAAAGGACCTTTCTGAC...AATCCCTTTTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAAATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
ENST00000512843.1
CDS-3UTR TCA 90 bp CATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAAAAGGGATTTCAAACTTCCCAAATATaGTTCAGTGAAGAGTCAGAG +
Preference number: 4 (lower is better)
Translates to: HLRIYLEWKCQVILQKGFQTSQI*FSEESE
Trigger: CTCTGACTCTTCACTGAATCATATTTGGGAAGTTTG...AAATCCCTTTTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262995.8
CDS-3UTR TCA 90 bp TTGATTATGTCAGAAAGGTCCTTTGACTTCAACTCTACTCATTTGAGGATCTACCCAACATCCTGTTCATaGCTAGAGTCTAGGAAAGTA +
Preference number: 4 (lower is better)
Translates to: LIMSERSFDFNSTHLRIYPTSCS*LESRKV
Trigger: TACTTTCCTAGACTCTAGTCATGAACAGGATGTTGG...GTAGATCCTCAAATGAGTAGAGTTGAAGTCAAAGGACCTTTCTGACATAATCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505913.5
CDS-3UTR GCA 90 bp ATGTCAGAAAGGTCCTTTGACTTCAACTCTACTCATTTGAGGATCTACCTAGAGTCTATCACTTGGAAATaGTCGTGGAATATCATAGCA +
Preference number: 4 (lower is better)
Translates to: MSERSFDFNSTHLRIYLESITWK*SWNIIA
Trigger: TGCTATGATATTCCACGAGCATTTCCAAGTGATAGA...CTCTAGGTAGATCCTCAAATGAGTAGAGTTGAAGTCAAAGGACCTTTCTGACAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR GCA 90 bp GACTTCAACTCTACTCATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTTCTATCACTTGGAAATaGTCGTGGAATATCATAGCA +
Preference number: 4 (lower is better)
Translates to: DFNSTHLRIYLEWKCQVISITWK*SWNIIA
Trigger: TGCTATGATATTCCACGAGCATTTCCAAGTGATAGA...AATGACTTGACACTTCCACTCTAGGTAGATCCTCAAATGAGTAGAGTTGAAGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR GCA 90 bp TACTCATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAAAAGGGTCTATCACTTGGAAATaGTCGTGGAATATCATAGCA +
Preference number: 4 (lower is better)
Translates to: YSFEDLPRVEVSSHSSKGSITWK*SWNIIA
Trigger: TGCTATGATATTCCACGAGCATTTCCAAGTGATAGA...CCCTTTTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAAATGAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR GCA 90 bp TACTCATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAAAAGGGCATTGGCACATAATTTaGTTCCTGAATTGGTTCTGT +
Preference number: 4 (lower is better)
Translates to: YSFEDLPRVEVSSHSSKGHWHII*FLNWFC
Trigger: ACAGAACCAATTCAGGAAGCAAATTATGTGCCAATG...CCCTTTTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAAATGAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR GCA 90 bp ACTCATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAAAAGGGACATTGGCACATAATTTaGTTCCTGAATTGGTTCTGT +
Preference number: 4 (lower is better)
Translates to: THLRIYLEWKCQVILQKGHWHII*FLNWFC
Trigger: ACAGAACCAATTCAGGAAGCAAATTATGTGCCAATG...TCCCTTTTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAAATGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR GCA 90 bp TGCTTGATTATGTCAGAAAGGTCCTTTGACTTCAACTCTACTCATTTGAGGATCCATCAAGACTGTTACTaGCAAAGAGATTTGGGTCTT +
Preference number: 4 (lower is better)
Translates to: CLIMSERSFDFNSTHLRIHQDCY*QRDLGL
Trigger: AAGACCCAAATCTCTTTGGCAGTAACAGTCTTGATG...GATCCTCAAATGAGTAGAGTTGAAGTCAAAGGACCTTTCTGACATAATCAAGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CCA 90 bp TTGTTCAGATACCACAAAGCACCACTTAAGTCTAAATTGCTTGATTATGTCAGAATGAATCTGCCTGGGTaGATGGTGGTGCTGTATTTA +
Preference number: 4 (lower is better)
Translates to: LFRYHKAPLKSKLLDYVRMNLPG*MVVLYL
Trigger: TAAATACAGCACCACCATCCACCCAGGCAGATTCAT...TCTGACATAATCAAGCAATTTAGACTTAAGTGGTGCTTTGTGGTATCTGAACAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
ENST00000512843.1
CDS-3UTR CCA 90 bp AGTAATACTACGAGTGTGTTAACTGTGGAACAAATGTTTCTCTGGGAGCTAAACCTGTTTCAGAAGAGGTaGATTTTGCAGAATCAGCAT +
Preference number: 4 (lower is better)
Translates to: SNTTSVLTVEQMFLWELNLFQKR*ILQNQH
Trigger: ATGCTGATTCTGCAAAATCCACCTCTTCTGAAACAG...GTTTAGCTCCCAGAGAAACATTTGTTCCACAGTTAACACACTCGTAGTATTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CCA 90 bp CATGTTATGAATTGTTCAGATACCACAAAGCACCACTTAAGTCTAAATTGCTTGGCAGGTTATAAAGGCTaGAGTCAACTGAAGCAGATG +
Preference number: 4 (lower is better)
Translates to: HVMNCSDTTKHHLSLNCLAGYKG*SQLKQM
Trigger: CATCTGCTTCAGTTGACTCCAGCCTTTATAACCTGC...CAAGCAATTTAGACTTAAGTGGTGCTTTGTGGTATCTGAACAATTCATAACATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CCA 90 bp TTGTTCAGATACCACAAAGCACCACTTAAGTCTAAATTGCTTGATTATGTCAGATCCCAAGGTTCCTTCTaGAAATGTTCGTGGAATCTG +
Preference number: 4 (lower is better)
Translates to: LFRYHKAPLKSKLLDYVRSQGSF*KCSWNL
Trigger: CAGATTCCACGAACATTTCCAGAAGGAACCTTGGGA...TCTGACATAATCAAGCAATTTAGACTTAAGTGGTGCTTTGTGGTATCTGAACAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CCA 90 bp TTTGACTTCAACTCTACTCATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCACTAGATCTATCACTTaGAAATGCTCGTGGAATATC +
Preference number: 4 (lower is better)
Translates to: FDFNSTHLRIYLEWKCQVTRSIT*KCSWNI
Trigger: GATATTCCACGAGCATTTCCAAGTGATAGATCTAGT...GACTTGACACTTCCACTCTAGGTAGATCCTCAAATGAGTAGAGTTGAAGTCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CCA 90 bp AGACAGAATTATACCATCCCTCTGGTGTTTTCAGAAATCTGGTTGGAAGGAGTCACTTTAAAGTGGTTATaGAAGCCTTCAAGTGAACTA +
Preference number: 4 (lower is better)
Translates to: RQNYTIPLVFSEIWLEGVTLKWL*KPSSEL
Trigger: TAGTTCACTTGAAGGCTTCCATAACCACTTTAAAGT...GACTCCTTCCAACCAGATTTCTGAAAACACCAGAGGGATGGTATAATTCTGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262995.8
CDS-3UTR CCA 90 bp GTTAACTGTGGAACAAATGTTTCTCTGGGAGCTAAACAATACTATTTTCCCACATGTTCCTGGAGTCATTaGCACATAATTTGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: VNCGTNVSLGAKQYYFPTCSWSH*HIICFL
Trigger: CAGGAAGCAAATTATGTGCCAATGACTCCAGGAACA...TGTGGGAAAATAGTATTGTTTAGCTCCCAGAGAAACATTTGTTCCACAGTTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CCA 90 bp AACTCCCAAAGGAATTATGGTAAGGTACATTGGGAAAACCCAGAACAATGTTTTTGTTCCTGGAGTCATTaGCACATAATTTGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: NSQRNYGKVHWENPEQCFCSWSH*HIICFL
Trigger: CAGGAAGCAAATTATGTGCCAATGACTCCAGGAACA...AAAACATTGTTCTGGGTTTTCCCAATGTACCTTACCATAATTCCTTTGGGAGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CCA 90 bp AGTCTAAATTGCTTGATTATGTCAGAAAGGTCCTTTGACTTCAACTCTACTCATCTTGACTTTTCTGTCTaGCTTGAGGTTCCTATCCAC +
Preference number: 4 (lower is better)
Translates to: SLNCLIMSERSFDFNSTHLDFSV*LEVPIH
Trigger: GTGGATAGGAACCTCAAGCCAGACAGAAAAGTCAAG...ATGAGTAGAGTTGAAGTCAAAGGACCTTTCTGACATAATCAAGCAATTTAGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262994.8
ENST00000505913.5
CDS-3UTR CCA 90 bp CATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAAAAGGGATTTACAGGTTTGGGTTCATaGGAACATAATTCTCTTCAC +
Preference number: 4 (lower is better)
Translates to: HLRIYLEWKCQVILQKGFTGLGS*EHNSLH
Trigger: GTGAAGAGAATTATGTTCCCATGAACCCAAACCTGT...AAATCCCTTTTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CCA 90 bp TACTACGAGTGTGTTAACTGTGGAACAAATGTTTCTCTGGGAGCTAAACAATACTTCACTGGACAGGTTTaGGTTCATGGGAACATAATT +
Preference number: 4 (lower is better)
Translates to: YYECVNCGTNVSLGAKQYFTGQV*VHGNII
Trigger: AATTATGTTCCCATGAACCCAAACCTGTCCAGTGAA...GTATTGTTTAGCTCCCAGAGAAACATTTGTTCCACAGTTAACACACTCGTAGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CCA 90 bp TTCAACTCTACTCATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTTTCACTGGACAGGTTTaGGTTCATGGGAACATAATT +
Preference number: 4 (lower is better)
Translates to: FNSTHLRIYLEWKCQVILFTGQV*VHGNII
Trigger: AATTATGTTCCCATGAACCCAAACCTGTCCAGTGAA...AAGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAAATGAGTAGAGTTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CCA 90 bp CATGTTATGAATTGTTCAGATACCACAAAGCACCACTTAAGTCTAAATTGCTTGGCTTACGTGGTGGTGTaGATTTCCCAGAATCTAAGT +
Preference number: 4 (lower is better)
Translates to: HVMNCSDTTKHHLSLNCLAYVVV*ISQNLS
Trigger: ACTTAGATTCTGGGAAATCCACACCACCACGTAAGC...CAAGCAATTTAGACTTAAGTGGTGCTTTGTGGTATCTGAACAATTCATAACATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CCA 90 bp AGTGTGTTAACTGTGGAACAAATGTTTCTCTGGGAGCTAAACAATACTATTTTCCTTTTGCTTACGTGGTaGTGTGGATTTCCCAGAATC +
Preference number: 4 (lower is better)
Translates to: SVLTVEQMFLWELNNTIFLLLTW*CGFPRI
Trigger: GATTCTGGGAAATCCACACCACCACGTAAGCAAAAG...GAAAATAGTATTGTTTAGCTCCCAGAGAAACATTTGTTCCACAGTTAACACACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CCA 90 bp TTCAACTCTACTCATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTAGGATCTACCTAGAGTaGAAGTGTCAAGTCATTCTT +
Preference number: 4 (lower is better)
Translates to: FNSTHLRIYLEWKCQVILRIYLE*KCQVIL
Trigger: AAGAATGACTTGACACTTCCACTCTAGGTAGATCCT...AAGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAAATGAGTAGAGTTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
ENST00000512843.1
CDS-3UTR CCA 90 bp AACTCTACTCATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAAAGGATCTACCTAGAGTaGAAGTGTCAAGTCATTCTT +
Preference number: 4 (lower is better)
Translates to: NSTHLRIYLEWKCQVILQRIYLE*KCQVIL
Trigger: AAGAATGACTTGACACTTCCACTCTAGGTAGATCCT...TTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAAATGAGTAGAGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
ENST00000512843.1
CDS-3UTR CCA 90 bp CATGTTATGAATTGTTCAGATACCACAAAGCACCACTTAAGTCTAAATTGCTTGTTAGGCACAGTACTATaGCCAATGGGCCAGAAATCA +
Preference number: 4 (lower is better)
Translates to: HVMNCSDTTKHHLSLNCLLGTVL*PMGQKS
Trigger: TGATTTCTGGCCCATTGGCCATAGTACTGTGCCTAA...CAAGCAATTTAGACTTAAGTGGTGCTTTGTGGTATCTGAACAATTCATAACATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262995.8
CDS-3UTR CCA 90 bp AATACTACGAGTGTGTTAACTGTGGAACAAATGTTTCTCTGGGAGCTAAACAATTTTTTAGCCCATTCCTaGCCAAAGTCTAGCTTCTTG +
Preference number: 4 (lower is better)
Translates to: NTTSVLTVEQMFLWELNNFLAHS*PKSSFL
Trigger: CAAGAAGCTAGACTTTGGCCAGGAATGGGCTAAAAA...ATTGTTTAGCTCCCAGAGAAACATTTGTTCCACAGTTAACACACTCGTAGTATT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000262995.8
CDS-3UTR TCA 90 bp AGTGTGTTAACTGTGGAACAAATGTTTCTCTGGGAGCTAAACAATACTATTTTCATCCAGTTCTTCACTTaGAACACTTCCCACTGTCAA +
Preference number: 4 (lower is better)
Translates to: SVLTVEQMFLWELNNTIFIQFFT*NTSHCQ
Trigger: TTGACAGTGGGAAGTGTTTCAAGTGAAGAACTGGAT...GAAAATAGTATTGTTTAGCTCCCAGAGAAACATTTGTTCCACAGTTAACACACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR TCA 90 bp GGGAGCTTTTTCTATTTACTTAGAGAGGATCATGACTTGTGTTTCAACATGATTCAGAGAACTAGGTCCTaGCACCAGTACATACATTAT +
Preference number: 4 (lower is better)
Translates to: GSFFYLLREDHDLCFNMIQRTRS*HQYIHY
Trigger: ATAATGTATGTACTGGTGTCAGGACCTAGTTCTCTG...AATCATGTTGAAACACAAGTCATGATCCTCTCTAAGTAAATAGAAAAAGCTCCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262995.8
CDS-3UTR TCA 90 bp AACTCCCAAAGGAATTATGGTAAGGTACATTGGGAAAACCCAGAACAATGTTTTCCAAATATGATTCAGTaGAGAGTCAGAGTTGCAAGT +
Preference number: 4 (lower is better)
Translates to: NSQRNYGKVHWENPEQCFPNMIQ*RVRVAS
Trigger: ACTTGCAACTCTGACTCTTCACTGAATCATATTTGG...AAAACATTGTTCTGGGTTTTCCCAATGTACCTTACCATAATTCCTTTGGGAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262995.8
CDS-3UTR TCA 90 bp TGCTTGATTATGTCAGAAAGGTCCTTTGACTTCAACTCTACTCATTTGAGGATCATAGCCTCACCAAGTTaGCACATAATATTAACCATC +
Preference number: 4 (lower is better)
Translates to: CLIMSERSFDFNSTHLRIIASPS*HIILTI
Trigger: GATGGTTAATATTATGTGTCAACTTGGTGAGGCTAT...GATCCTCAAATGAGTAGAGTTGAAGTCAAAGGACCTTTCTGACATAATCAAGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262995.8
CDS-3UTR GCA 90 bp AGTCTAAATTGCTTGATTATGTCAGAAAGGTCCTTTGACTTCAACTCTACTCATAGAAGAGGTGGATTTTaGAGAATCAGCATGCGTTCT +
Preference number: 4 (lower is better)
Translates to: SLNCLIMSERSFDFNSTHRRGGF*RISMRS
Trigger: AGAACGCATGCTGATTCTGCAAAATCCACCTCTTCT...ATGAGTAGAGTTGAAGTCAAAGGACCTTTCTGACATAATCAAGCAATTTAGACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR GCA 90 bp AGTCTAAATTGCTTGATTATGTCAGAAAGGTCCTTTGACTTCAACTCTACTCATAAGGGACGTTATCATTaGAGTCTGTTTCAGAAGAGG +
Preference number: 4 (lower is better)
Translates to: SLNCLIMSERSFDFNSTHKGRYH*SLFQKR
Trigger: CCTCTTCTGAAACAGACTGCAATGATAACGTCCCTT...ATGAGTAGAGTTGAAGTCAAAGGACCTTTCTGACATAATCAAGCAATTTAGACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR GCA 90 bp AATTGCTTGATTATGTCAGAAAGGTCCTTTGACTTCAACTCTACTCATTTGAGGCATCAAGACTGTTACTaGCAAAGAGATTTGGGTCTT +
Preference number: 4 (lower is better)
Translates to: NCLIMSERSFDFNSTHLRHQDCY*QRDLGL
Trigger: AAGACCCAAATCTCTTTGGCAGTAACAGTCTTGATG...CCTCAAATGAGTAGAGTTGAAGTCAAAGGACCTTTCTGACATAATCAAGCAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR GCA 90 bp TTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAAAAGGGATTTATCTTGAAAGCAGAACTGTaGTTCAGTATTCAAACCTTC +
Preference number: 4 (lower is better)
Translates to: LRIYLEWKCQVILQKGFILKAEL*FSIQTF
Trigger: GAAGGTTTGAATACTGAAGCACAGTTCTGCTTTCAA...GATAAATCCCTTTTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262995.8
CDS-3UTR CCA 90 bp GTTAACTGTGGAACAAATGTTTCTCTGGGAGCTAAACAATACTATTTTCCCACAAGGATCTTCTTCTGTTaGATTAAACCCACAGATGTC +
Preference number: 4 (lower is better)
Translates to: VNCGTNVSLGAKQYYFPTRIFFC*IKPTDV
Trigger: GACATCTGTGGGTTTAATCCAACAGAAGAAGATCCT...TGTGGGAAAATAGTATTGTTTAGCTCCCAGAGAAACATTTGTTCCACAGTTAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CCA 90 bp TTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAAAAGGGATTTATACTCGATGTCCCAGATaGGGTATTAAAAACATAGAG +
Preference number: 4 (lower is better)
Translates to: FEDLPRVEVSSHSSKGIYTRCPR*GIKNIE
Trigger: CTCTATGTTTTTAATACCCCATCTGGGACATCGAGT...ATAAATCCCTTTTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CCA 90 bp TTGTTCAGATACCACAAAGCACCACTTAAGTCTAAATTGCTTGATTATGTCAGAAATCCACAGTGGAAATaGTATTACTACGTGAAGGCG +
Preference number: 4 (lower is better)
Translates to: LFRYHKAPLKSKLLDYVRNPQWK*YYYVKA
Trigger: CGCCTTCACGTAGTAATACCATTTCCACTGTGGATT...TCTGACATAATCAAGCAATTTAGACTTAAGTGGTGCTTTGTGGTATCTGAACAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CCA 90 bp ACTCATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAAAAGGGATGTTTAAATCCACAGTaGAAATGGTATTACTACGTG +
Preference number: 4 (lower is better)
Translates to: THLRIYLEWKCQVILQKGCLNPQ*KWYYYV
Trigger: CACGTAGTAATACCATTTCCACTGTGGATTTAAACA...TCCCTTTTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAAATGAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CCA 90 bp CTTCAACTCTACTCATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTGTTTAAATCCACAGTaGAAATGGTATTACTACGTG +
Preference number: 4 (lower is better)
Translates to: LQLYSFEDLPRVEVSSHSCLNPQ*KWYYYV
Trigger: CACGTAGTAATACCATTTCCACTGTGGATTTAAACA...AGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAAATGAGTAGAGTTGAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CCA 90 bp AGTCTAAATTGCTTGATTATGTCAGAAAGGTCCTTTGACTTCAACTCTACTCATTGTTCCTGGAGTCATTaGCACATAATTTGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: SLNCLIMSERSFDFNSTHCSWSH*HIICFL
Trigger: CAGGAAGCAAATTATGTGCCAATGACTCCAGGAACA...ATGAGTAGAGTTGAAGTCAAAGGACCTTTCTGACATAATCAAGCAATTTAGACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CCA 90 bp GTTAACTGTGGAACAAATGTTTCTCTGGGAGCTAAACAATACTATTTTCCCACAACAGGTTTGGGTTCATaGGAACATAATTCTCTTCAC +
Preference number: 4 (lower is better)
Translates to: VNCGTNVSLGAKQYYFPTTGLGS*EHNSLH
Trigger: GTGAAGAGAATTATGTTCCCATGAACCCAAACCTGT...TGTGGGAAAATAGTATTGTTTAGCTCCCAGAGAAACATTTGTTCCACAGTTAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CCA 90 bp AGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAAAAGGGATTTATCTTTAGGATCTACCTAGAGTaGAAGTGTCAAGTCATTCTT +
Preference number: 4 (lower is better)
Translates to: RIYLEWKCQVILQKGFIFRIYLE*KCQVIL
Trigger: AAGAATGACTTGACACTTCCACTCTAGGTAGATCCT...AAAGATAAATCCCTTTTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
ENST00000512843.1
3UTR CAA 72 bp AATTATACCATCCCTCTGGTGTTTTCAGAAATCTGGTaGGAAGGAGTCCATGACTATAACATTTCACATTGT +
Preference number: 4 (lower is better)
Translates to: NYTIPLVFSEIW*EGVHDYNISHC
Trigger: ACAATGTGAAATGTTATAGTCATGGACTCCTTCCAACCAGATTTCTGAAAACACCAGAGGGATGGTATAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262995.8
CDS-3UTR TCA 90 bp CATGTTATGAATTGTTCAGATACCACAAAGCACCACTTAAGTCTAAATTGCTTGGTCAGAAAGGTCCTTTaGCTTCAACTCTACTCATTT +
Preference number: 4 (lower is better)
Translates to: HVMNCSDTTKHHLSLNCLVRKVL*LQLYSF
Trigger: AAATGAGTAGAGTTGAAGTCAAAGGACCTTTCTGAC...CAAGCAATTTAGACTTAAGTGGTGCTTTGTGGTATCTGAACAATTCATAACATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
ENST00000512843.1
CDS-3UTR TCA 90 bp AATTGCTTGATTATGTCAGAAAGGTCCTTTGACTTCAACTCTACTCATTTGAGGGCTATGTTAATACCTTaGCCAATCAGTTTGCTGAAA +
Preference number: 4 (lower is better)
Translates to: NCLIMSERSFDFNSTHLRAMLIP*PISLLK
Trigger: TTTCAGCAAACTGATTGGTCAAGGTATTAACATAGC...CCTCAAATGAGTAGAGTTGAAGTCAAAGGACCTTTCTGACATAATCAAGCAATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262995.8
CDS-3UTR GCA 90 bp GAGTGTGTTAACTGTGGAACAAATGTTTCTCTGGGAGCTAAACAATACTATTTTCATCAAGACTGTTACTaGCAAAGAGATTTGGGTCTT +
Preference number: 4 (lower is better)
Translates to: ECVNCGTNVSLGAKQYYFHQDCY*QRDLGL
Trigger: AAGACCCAAATCTCTTTGGCAGTAACAGTCTTGATG...AAAATAGTATTGTTTAGCTCCCAGAGAAACATTTGTTCCACAGTTAACACACTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CCA 90 bp AGTGTGTTAACTGTGGAACAAATGTTTCTCTGGGAGCTAAACAATACTATTTTCAGGATCTTCTTCTGTTaGATTAAACCCACAGATGTC +
Preference number: 4 (lower is better)
Translates to: SVLTVEQMFLWELNNTIFRIFFC*IKPTDV
Trigger: GACATCTGTGGGTTTAATCCAACAGAAGAAGATCCT...GAAAATAGTATTGTTTAGCTCCCAGAGAAACATTTGTTCCACAGTTAACACACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CCA 90 bp CATGTTATGAATTGTTCAGATACCACAAAGCACCACTTAAGTCTAAATTGCTTGCTGTTTCAGAAGAGGTaGATTTTGCAGAATCAGCAT +
Preference number: 4 (lower is better)
Translates to: HVMNCSDTTKHHLSLNCLLFQKR*ILQNQH
Trigger: ATGCTGATTCTGCAAAATCCACCTCTTCTGAAACAG...CAAGCAATTTAGACTTAAGTGGTGCTTTGTGGTATCTGAACAATTCATAACATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CCA 90 bp AGTGTGTTAACTGTGGAACAAATGTTTCTCTGGGAGCTAAACAATACTATTTTCCTGTTTCAGAAGAGGTaGATTTTGCAGAATCAGCAT +
Preference number: 4 (lower is better)
Translates to: SVLTVEQMFLWELNNTIFLFQKR*ILQNQH
Trigger: ATGCTGATTCTGCAAAATCCACCTCTTCTGAAACAG...GAAAATAGTATTGTTTAGCTCCCAGAGAAACATTTGTTCCACAGTTAACACACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CCA 90 bp TTGTTCAGATACCACAAAGCACCACTTAAGTCTAAATTGCTTGATTATGTCAGAACTCGATGTCCCAGATaGGGTATTAAAAACATAGAG +
Preference number: 4 (lower is better)
Translates to: LFRYHKAPLKSKLLDYVRTRCPR*GIKNIE
Trigger: CTCTATGTTTTTAATACCCCATCTGGGACATCGAGT...TCTGACATAATCAAGCAATTTAGACTTAAGTGGTGCTTTGTGGTATCTGAACAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CCA 90 bp AGTCTAAATTGCTTGATTATGTCAGAAAGGTCCTTTGACTTCAACTCTACTCATACTCGATGTCCCAGATaGGGTATTAAAAACATAGAG +
Preference number: 4 (lower is better)
Translates to: SLNCLIMSERSFDFNSTHTRCPR*GIKNIE
Trigger: CTCTATGTTTTTAATACCCCATCTGGGACATCGAGT...ATGAGTAGAGTTGAAGTCAAAGGACCTTTCTGACATAATCAAGCAATTTAGACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CCA 90 bp AACTCTACTCATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAAAGTATTACCAGGTGTTaGAGGAATGTCATAACTAAT +
Preference number: 4 (lower is better)
Translates to: NSTHLRIYLEWKCQVILQSITRC*RNVITN
Trigger: ATTAGTTATGACATTCCTCCAACACCTGGTAATACT...TTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAAATGAGTAGAGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CCA 90 bp AGAACTCCCAAAGGAATTATGGTAAGGTACATTGGGAAAACCCAGAACAATGTTAGTATTACCAGGTGTTaGAGGAATGTCATAACTAAT +
Preference number: 4 (lower is better)
Translates to: RTPKGIMVRYIGKTQNNVSITRC*RNVITN
Trigger: ATTAGTTATGACATTCCTCCAACACCTGGTAATACT...AACATTGTTCTGGGTTTTCCCAATGTACCTTACCATAATTCCTTTGGGAGTTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CCA 90 bp CATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAAAAGGGATTTAGTATTACCAGGTGTTaGAGGAATGTCATAACTAAT +
Preference number: 4 (lower is better)
Translates to: HLRIYLEWKCQVILQKGFSITRC*RNVITN
Trigger: ATTAGTTATGACATTCCTCCAACACCTGGTAATACT...AAATCCCTTTTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CCA 90 bp TGCTTGATTATGTCAGAAAGGTCCTTTGACTTCAACTCTACTCATTTGAGGATCTGTTTAAATCCACAGTaGAAATGGTATTACTACGTG +
Preference number: 4 (lower is better)
Translates to: CLIMSERSFDFNSTHLRICLNPQ*KWYYYV
Trigger: CACGTAGTAATACCATTTCCACTGTGGATTTAAACA...GATCCTCAAATGAGTAGAGTTGAAGTCAAAGGACCTTTCTGACATAATCAAGCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CCA 90 bp AGTGTGTTAACTGTGGAACAAATGTTTCTCTGGGAGCTAAACAATACTATTTTCACTTGGAAATGCTCGTaGAATATCATAGCAGTCTTG +
Preference number: 4 (lower is better)
Translates to: SVLTVEQMFLWELNNTIFTWKCS*NIIAVL
Trigger: CAAGACTGCTATGATATTCCACGAGCATTTCCAAGT...GAAAATAGTATTGTTTAGCTCCCAGAGAAACATTTGTTCCACAGTTAACACACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CCA 90 bp CTAAATTGCTTGATTATGTCAGAAAGGTCCTTTGACTTCAACTCTACTCATTTGACTTGGAAATGCTCGTaGAATATCATAGCAGTCTTG +
Preference number: 4 (lower is better)
Translates to: LNCLIMSERSFDFNSTHLTWKCS*NIIAVL
Trigger: CAAGACTGCTATGATATTCCACGAGCATTTCCAAGT...CAAATGAGTAGAGTTGAAGTCAAAGGACCTTTCTGACATAATCAAGCAATTTAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CCA 90 bp AACTCCCAAAGGAATTATGGTAAGGTACATTGGGAAAACCCAGAACAATGTTTTACTAGATCTATCACTTaGAAATGCTCGTGGAATATC +
Preference number: 4 (lower is better)
Translates to: NSQRNYGKVHWENPEQCFTRSIT*KCSWNI
Trigger: GATATTCCACGAGCATTTCCAAGTGATAGATCTAGT...AAAACATTGTTCTGGGTTTTCCCAATGTACCTTACCATAATTCCTTTGGGAGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CCA 90 bp TTGATTATGTCAGAAAGGTCCTTTGACTTCAACTCTACTCATTTGAGGATCTACACTAGATCTATCACTTaGAAATGCTCGTGGAATATC +
Preference number: 4 (lower is better)
Translates to: LIMSERSFDFNSTHLRIYTRSIT*KCSWNI
Trigger: GATATTCCACGAGCATTTCCAAGTGATAGATCTAGT...GTAGATCCTCAAATGAGTAGAGTTGAAGTCAAAGGACCTTTCTGACATAATCAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CCA 90 bp AACTCTACTCATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAAACTTTAAAGTGGTTATaGAAGCCTTCAAGTGAACTA +
Preference number: 4 (lower is better)
Translates to: NSTHLRIYLEWKCQVILQTLKWL*KPSSEL
Trigger: TAGTTCACTTGAAGGCTTCCATAACCACTTTAAAGT...TTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAAATGAGTAGAGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CCA 90 bp AGTGTGTTAACTGTGGAACAAATGTTTCTCTGGGAGCTAAACAATACTATTTTCACAGGTTTGGGTTCATaGGAACATAATTCTCTTCAC +
Preference number: 4 (lower is better)
Translates to: SVLTVEQMFLWELNNTIFTGLGS*EHNSLH
Trigger: GTGAAGAGAATTATGTTCCCATGAACCCAAACCTGT...GAAAATAGTATTGTTTAGCTCCCAGAGAAACATTTGTTCCACAGTTAACACACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CCA 90 bp AGTCTAAATTGCTTGATTATGTCAGAAAGGTCCTTTGACTTCAACTCTACTCATAGGATCTACCTAGAGTaGAAGTGTCAAGTCATTCTT +
Preference number: 4 (lower is better)
Translates to: SLNCLIMSERSFDFNSTHRIYLE*KCQVIL
Trigger: AAGAATGACTTGACACTTCCACTCTAGGTAGATCCT...ATGAGTAGAGTTGAAGTCAAAGGACCTTTCTGACATAATCAAGCAATTTAGACT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
ENST00000512843.1
CDS-3UTR CCA 90 bp ATAAAAACGCACATTCTGATGTGTTACATACCCTACTTTACCACACTGGAGACTTGGTACGTACCTGATTaGTTACATAATCTACCTTTT +
Preference number: 4 (lower is better)
Translates to: IKTHILMCYIPYFTTLETWYVPD*LHNLPF
Trigger: AAAAGGTAGATTATGTAACCAATCAGGTACGTACCA...AGTCTCCAGTGTGGTAAAGTAGGGTATGTAACACATCAGAATGTGCGTTTTTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262995.8
CDS-3UTR GCA 90 bp CATGTTATGAATTGTTCAGATACCACAAAGCACCACTTAAGTCTAAATTGCTTGCATTGGCACATAATTTaGTTCCTGAATTGGTTCTGT +
Preference number: 4 (lower is better)
Translates to: HVMNCSDTTKHHLSLNCLHWHII*FLNWFC
Trigger: ACAGAACCAATTCAGGAAGCAAATTATGTGCCAATG...CAAGCAATTTAGACTTAAGTGGTGCTTTGTGGTATCTGAACAATTCATAACATG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR GCA 90 bp AGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAAAAGGGATTTATCTTTCTTTCTAAATTATGTTaGAAAGCCAAGACAGACGAA +
Preference number: 4 (lower is better)
Translates to: RIYLEWKCQVILQKGFIFLSKLC*KAKTDE
Trigger: TTCGTCTGTCTTGGCTTTGCAACATAATTTAGAAAG...AAAGATAAATCCCTTTTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262995.8
CDS-3UTR GCA 90 bp TTGTTCAGATACCACAAAGCACCACTTAAGTCTAAATTGCTTGATTATGTCAGAAAAACATTCATTAAGTaGTTTAGACCCTTGATAGGC +
Preference number: 4 (lower is better)
Translates to: LFRYHKAPLKSKLLDYVRKTFIK*FRPLIG
Trigger: GCCTATCAAGGGTCTAAAGCACTTAATGAATGTTTT...TCTGACATAATCAAGCAATTTAGACTTAAGTGGTGCTTTGTGGTATCTGAACAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262995.8
CDS-3UTR CCA 90 bp CATGTTATGAATTGTTCAGATACCACAAAGCACCACTTAAGTCTAAATTGCTTGACTTTAAAGTGGTTATaGAAGCCTTCAAGTGAACTA +
Preference number: 4 (lower is better)
Translates to: HVMNCSDTTKHHLSLNCLTLKWL*KPSSEL
Trigger: TAGTTCACTTGAAGGCTTCCATAACCACTTTAAAGT...CAAGCAATTTAGACTTAAGTGGTGCTTTGTGGTATCTGAACAATTCATAACATG
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CCA 90 bp TTCAGATACCACAAAGCACCACTTAAGTCTAAATTGCTTGATTATGTCAGAAAGATAGAAAGGGCACTATaGTGTCAAAAGACAGAATTT +
Preference number: 4 (lower is better)
Translates to: FRYHKAPLKSKLLDYVRKIERAL*CQKTEF
Trigger: AAATTCTGTCTTTTGACACCATAGTGCCCTTTCTAT...CTTTCTGACATAATCAAGCAATTTAGACTTAAGTGGTGCTTTGTGGTATCTGAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262995.8
CDS GCA 90 bp GGGCAGCTGAGGGGCGGCGGGCGCGCTCCCGACACAGCCGACGCCTaGCGAGCGCGCAGTGGCGAGAACCTAGCTCTCCTGGTCGCGCAC +
Preference number: 5 (lower is better)
Translates to: GQLRGGGRAPDTADA*RARSGENLALLVAH
Trigger: GTGCGCGACCAGGAGAGCTAGGTTCTCGCCACTGCGCGCTCGGCAGGCGTCGGCTGTGTCGGGAGCGCGCCCGCCGCCCCTCAGCTGCCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262994.8
ENST00000262995.8
CDS CCA 90 bp CGGCGGGCGCGCTCCCGACACAGCCGACGCCTGCCGAGCGCGCAGTaGCGAGAACCTAGCTCTCCTGGTCGCGCACCCCGGACGGACTGG +
Preference number: 5 (lower is better)
Translates to: RRARSRHSRRLPSAQ*REPSSPGRAPRTDW
Trigger: CCAGTCCGTCCGGGGTGCGCGACCAGGAGAGCTAGGTTCTCGCCACTGCGCGCTCGGCAGGCGTCGGCTGTGTCGGGAGCGCGCCCGCCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262994.8
ENST00000262995.8
CDS GCA 90 bp ACTTGCGGAGCCATCCGGAGCAGACCACTTCACCACCGCTCATGGTaGGCGCGTCTCGGGCTCCGGGCCGGGCAGCTGAGGGGCGGCGGG +
Preference number: 5 (lower is better)
Translates to: TCGAIRSRPLHHRSW*ARLGLRAGQLRGGG
Trigger: CCCGCCGCCCCTCAGCTGCCCGGCCCGGAGCCCGAGACGCGCGCACCATGAGCGGTGGTGAAGTGGTCTGCTCCGGATGGCTCCGCAAGT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262994.8
ENST00000262995.8
CDS CCA 90 bp GGGACTTGCGGAGCCATCCGGAGCAGACCACTTCACCACCGCTCATaGTGCGCGCGTCTCGGGCTCCGGGCCGGGCAGCTGAGGGGCGGC +
Preference number: 5 (lower is better)
Translates to: GTCGAIRSRPLHHRS*CARLGLRAGQLRGG
Trigger: GCCGCCCCTCAGCTGCCCGGCCCGGAGCCCGAGACGCGCGCACCATGAGCGGTGGTGAAGTGGTCTGCTCCGGATGGCTCCGCAAGTCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262994.8
ENST00000262995.8
CDS GCA 90 bp CCGTCTCGCCAGCTGCCTCAGCAGCGCTCGGACTCAGCGGGACTCTaGCCCGACTCGGTGCCGGAGCTTCTGTCCTTTGCGCTCCGCCCC +
Preference number: 5 (lower is better)
Translates to: PSRQLPQQRSDSAGL*PDSVPELLSFALRP
Trigger: GGGGCGGAGCGCAAAGGACAGAAGCTCCGGCACCGAGTCGGGGCAGAGTCCCGCTGAGTCCGAGCGCTGCTGAGGCAGCTGGCGAGACGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262995.8
CDS GCA 90 bp CTTTCAGTGCGCCCGCCTCGCCTCCAGACGTGCCGTCTCGCCAGCTaGCTCAGCAGCGCTCGGACTCAGCGGGACTCTGCCCCGACTCGG +
Preference number: 5 (lower is better)
Translates to: LSVRPPRLQTCRLAS*LSSARTQRDSAPTR
Trigger: CCGAGTCGGGGCAGAGTCCCGCTGAGTCCGAGCGCTGCTGAGGCAGCTGGCGAGACGGCACGTCTGGAGGCGAGGCGGGCGCACTGAAAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262995.8
CDS TCA 90 bp GCGGGTTCCACGAGTTCGAGTCTCTCCTCTGCAGGCCCACGAACCTaGACAGAACGCGAGCCGGGGCCGCGGGCGCGCCGGCCTCCTTTC +
Preference number: 5 (lower is better)
Translates to: AGSTSSSLSSAGPRT*TEREPGPRARRPPF
Trigger: GAAAGGAGGCCGGCGCGCCCGCGGCCCCGGCTCGCGTTCTGTTCAGGTTCGTGGGCCTGCAGAGGAGAGACTCGAACTCGTGGAACCCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262994.8
ENST00000262995.8
CDS GCA 90 bp TCCTGGTCGCGCACCCCGGACGGACTGGGCGGACAGACTCCACGGTaGGCGGGTTCCACGAGTTCGAGTCTCTCCTCTGCAGGCCCACGA +
Preference number: 5 (lower is better)
Translates to: SWSRTPDGLGGQTPR*AGSTSSSLSSAGPR
Trigger: TCGTGGGCCTGCAGAGGAGAGACTCGAACTCGTGGAACCCGCGCACCGTGGAGTCTGTCCGCCCAGTCCGTCCGGGGTGCGCGACCAGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262994.8
ENST00000262995.8
CDS GCA 90 bp ACAGACTCCACGGTGCGCGGGTTCCACGAGTTCGAGTCTCTCCTCTaGAGGCCCACGAACCTGAACAGAACGCGAGCCGGGGCCGCGGGC +
Preference number: 5 (lower is better)
Translates to: TDSTVRGFHEFESLL*RPTNLNRTRAGAAG
Trigger: GCCCGCGGCCCCGGCTCGCGTTCTGTTCAGGTTCGTGGGCCTGCAGAGGAGAGACTCGAACTCGTGGAACCCGCGCACCGTGGAGTCTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262994.8
ENST00000262995.8
CDS CCA 90 bp CAGTGGCGAGAACCTAGCTCTCCTGGTCGCGCACCCCGGACGGACTaGGCGGACAGACTCCACGGTGCGCGGGTTCCACGAGTTCGAGTC +
Preference number: 5 (lower is better)
Translates to: QWREPSSPGRAPRTD*ADRLHGARVPRVRV
Trigger: GACTCGAACTCGTGGAACCCGCGCACCGTGGAGTCTGTCCGCCCAGTCCGTCCGGGGTGCGCGACCAGGAGAGCTAGGTTCTCGCCACTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262994.8
ENST00000262995.8
CDS TCA 90 bp GAGGCGGTGCGTGGGATACTACACGTTTCCACAGGAGATCGGTCATaGGCTGGATGTGGTTTCGGTGGCCGAGGTGGAGGAATATCTGGA +
Preference number: 5 (lower is better)
Translates to: EAVRGILHVSTGDRS*AGCGFGGRGGGISG
Trigger: TCCAGATATTCCTCCACCTCGGCCACCGAAACCACATCCAGCTCATGACCGATCTCCTGTGGAAACGTGTAGTATCCCACGCACCGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
ENST00000507334.1
CDS TCA 90 bp AGGCGACATCCCTGCTGTAGGGATACAGTAACTACTGTCAGTGTCTaGGGCGGTGCGTGGGATACTACACGTTTCCACAGGAGATCGGTC +
Preference number: 5 (lower is better)
Translates to: RRHPCCRDTVTTVSV*GGAWDTTRFHRRSV
Trigger: GACCGATCTCCTGTGGAAACGTGTAGTATCCCACGCACCGCCTCAGACACTGACAGTAGTTACTGTATCCCTACAGCAGGGATGTCGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
ENST00000507334.1
CDS TCA 90 bp CTGCAACAGGAACTGGCCTTCTGGGAGGGGTTTTTGGGCTGGACCTaGAGCCCATATGAGCAGGAGGAGGAACTTGCATTCCAAATGAGG +
Preference number: 5 (lower is better)
Translates to: LQQELAFWEGFLGWT*SPYEQEEELAFQMR
Trigger: CCTCATTTGGAATGCAAGTTCCTCCTCCTGCTCATATGGGCTTCAGGTCCAGCCCAAAAACCCCTCCCAGAAGGCCAGTTCCTGTTGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
ENST00000507070.5
ENST00000508833.1
ENST00000510615.1
CDS CCA 90 bp GGTGCGTGGGATACTACACGTTTCCACAGGAGATCGGTCATGAGCTaGATGTGGTTTCGGTGGCCGAGGTGGAGGAATATCTGGAATAGT +
Preference number: 5 (lower is better)
Translates to: GAWDTTRFHRRSVMS*MWFRWPRWRNIWNS
Trigger: ACTATTCCAGATATTCCTCCACCTCGGCCACCGAAACCACATCCAGCTCATGACCGATCTCCTGTGGAAACGTGTAGTATCCCACGCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
ENST00000507334.1
CDS-3UTR CAA 90 bp AGAGGTCTGAATGGAGGGGGTCATGCCTCAACTGTGGGCACTCCTTTCTCTATGCATCCAGTTCTTCACTaGAAACACTTCCCACTGTCA +
Preference number: 5 (lower is better)
Translates to: RGLNGGGHASTVGTPFSMHPVLH*KHFPLS
Trigger: TGACAGTGGGAAGTGTTTCAAGTGAAGAACTGGATG...CATAGAGAAAGGAGTGCCCACAGTTGAGGCATGACCCCCTCCATTCAGACCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262995.8
CDS TCA 90 bp AATGGCAAGGCAATATTTTCATTTCACACTCTTCGCTGGCGTTTCTaGTTCTGTGGACTGTCTCCCATCTGTCCAGGCTTCCCGGGTACT +
Preference number: 5 (lower is better)
Translates to: NGKAIFSFHTLRWRF*FCGLSPICPGFPGT
Trigger: AGTACCCGGGAAGCCTGGACAGATGGGAGACAGTCCACAGAATCAGAAACGCCAGCGAAGAGTGTGAAATGAAAATATTGCCTTGCCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
ENST00000511109.1
CDS CCA 90 bp TTGGTAAAACATCATGGGAATAACTCCTGGGCAGGTTATAAAGGCTaGAGTCAACTGAAGCAGATGGGGCACGTGAAGGTGGAGAGTCGT +
Preference number: 5 (lower is better)
Translates to: LVKHHGNNSWAGYKG*SQLKQMGHVKVESR
Trigger: ACGACTCTCCACCTTCACGTGCCCCATCTGCTTCAGTTGACTCCAGCCTTTATAACCTGCCCAGGAGTTATTCCCATGATGTTTTACCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS CCA 90 bp GGCAATATTTTCATTTCACACTCTTCGCTGGCGTTTCTGATTCTGTaGACTGTCTCCCATCTGTCCAGGCTTCCCGGGTACTCTTTAGAG +
Preference number: 5 (lower is better)
Translates to: GNIFISHSSLAFLIL*TVSHLSRLPGYSLE
Trigger: CTCTAAAGAGTACCCGGGAAGCCTGGACAGATGGGAGACAGTCCACAGAATCAGAAACGCCAGCGAAGAGTGTGAAATGAAAATATTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
ENST00000511109.1
CDS CCA 90 bp CTCCTCTTCCATGCCTCATCCATATGCCCTCTCCTTCAACAGGAATaGGTGCTGACAAGACTGGCACACAAATTTCATCCTGCAATTTCC +
Preference number: 5 (lower is better)
Translates to: LLFHASSICPLLQQE*VLTRLAHKFHPAIS
Trigger: GGAAATTGCAGGATGAAATTTGTGTGCCAGTCTTGTCAGCACCCATTCCTGTTGAAGGAGAGGGCATATGGATGAGGCATGGAAGAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509992.1
CDS GCA 90 bp TCTGTTGGTCAACAACAACATAATCCACTCTCTCATCTGCTACACTaGTGCCTGAGCCACTGCTCTTTTGCTTACGTGGTGGTGTGGATT +
Preference number: 5 (lower is better)
Translates to: SVGQQQHNPLSHLLH*CLSHCSFAYVVVWI
Trigger: AATCCACACCACCACGTAAGCAAAAGAGCAGTGGCTCAGGCAGCAGTGTAGCAGATGAGAGAGTGGATTATGTTGTTGTTGACCAACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
ENST00000511109.1
CDS-3UTR CAA 90 bp GACTTCAACTCTACTCATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTAGTGAAGAGTCAGAGTaGCAAGTGGGCTGGGTGGGC +
Preference number: 5 (lower is better)
Translates to: DFNSTHLRIYLEWKCQVISEESE*QVGWVG
Trigger: GCCCACCCAGCCCACTTGCAACTCTGACTCTTCACT...AATGACTTGACACTTCCACTCTAGGTAGATCCTCAAATGAGTAGAGTTGAAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262995.8
CDS CCA 90 bp TACTTGATGGAGACACCTTTGGTAAAACATCATGGGAATAACTCCTaGGCAGGTTATAAAGGCTGGAGTCAACTGAAGCAGATGGGGCAC +
Preference number: 5 (lower is better)
Translates to: YLMETPLVKHHGNNS*AGYKGWSQLKQMGH
Trigger: GTGCCCCATCTGCTTCAGTTGACTCCAGCCTTTATAACCTGCCCAGGAGTTATTCCCATGATGTTTTACCAAAGGTGTCTCCATCAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS GCA 90 bp TGCTCTGGGAGGAAGCAGGATTTTTATGAGAAGGGACGTTATCATTaGAGTCTGTTTCAGAAGAGGTGGATTTTGCAGAATCAGCATGCG +
Preference number: 5 (lower is better)
Translates to: CSGRKQDFYEKGRYH*SLFQKRWILQNQHA
Trigger: CGCATGCTGATTCTGCAAAATCCACCTCTTCTGAAACAGACTGCAATGATAACGTCCCTTCTCATAAAAATCCTGCTTCCTCCCAGAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS CCA 90 bp TTTTATGAGAAGGGACGTTATCATTGCAGTCTGTTTCAGAAGAGGTaGATTTTGCAGAATCAGCATGCGTTCTGGTGGGTTCGGGCTTCT +
Preference number: 5 (lower is better)
Translates to: FYEKGRYHCSLFQKR*ILQNQHAFWWVRAS
Trigger: AGAAGCCCGAACCCACCAGAACGCATGCTGATTCTGCAAAATCCACCTCTTCTGAAACAGACTGCAATGATAACGTCCCTTCTCATAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS CCA 90 bp TACTGCCAAAGAGATTTGGGTCTTCACTGGACAGGTTTGGGTTCATaGGAACATAATTCTCTTCACTGTCGTGTGAGTCACTGCTTGAAG +
Preference number: 5 (lower is better)
Translates to: YCQRDLGLHWTGLGS*EHNSLHCRVSHCLK
Trigger: CTTCAAGCAGTGACTCACACGACAGTGAAGAGAATTATGTTCCCATGAACCCAAACCTGTCCAGTGAAGACCCAAATCTCTTTGGCAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS CCA 90 bp TCCATCAAGACTGTTATGGGTCTTCACTGGACAGGTTTGGGTTCATaGGAACATAATTCTCTTCACTGTCGTGTGAGTCACTGCTTGAAG +
Preference number: 5 (lower is better)
Translates to: SIKTVMGLHWTGLGS*EHNSLHCRVSHCLK
Trigger: CTTCAAGCAGTGACTCACACGACAGTGAAGAGAATTATGTTCCCATGAACCCAAACCTGTCCAGTGAAGACCCATAACAGTCTTGATGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508833.1
CDS-3UTR CAA 90 bp GAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAAAAGGGATTTATCTTCCTTTTCTGTCTGGCTaGAGGTTCCTATCCACGGGG +
Preference number: 5 (lower is better)
Translates to: EDLPRVEVSSHSSKGIYLPFLSG*RFLSTG
Trigger: CCCCGTGGATAGGAACCTCAAGCCAGACAGAAAAGG...AAGATAAATCCCTTTTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262995.8
CDS GCA 90 bp TTTTGTAATATTCCAAAACATCTGGATCTCCAGTTAAACGGCCACTaGGTAACACGAACCATCTCCTCTTCCATGCCTCATCCATATGCC +
Preference number: 5 (lower is better)
Translates to: FCNIPKHLDLQLNGH*VTRTISSSMPHPYA
Trigger: GGCATATGGATGAGGCATGGAAGAGGAGATGGTTCGTGTTACGCAGTGGCCGTTTAACTGGAGATCCAGATGTTTTGGAATATTACAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509992.1
CDS-3UTR CAA 90 bp AGGTCCTTTGACTTCAACTCTACTCATTTGAGGATCTACCTAGAGTGGAAGTGTTACTGCCAAAGAGATTaGGGTCTTCACTGGACAGGT +
Preference number: 5 (lower is better)
Translates to: RSFDFNSTHLRIYLEWKCYCQRD*GLHWTG
Trigger: ACCTGTCCAGTGAAGACCCAAATCTCTTTGGCAGTA...ACACTTCCACTCTAGGTAGATCCTCAAATGAGTAGAGTTGAAGTCAAAGGACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CAA 90 bp ATGTCAGAAAGGTCCTTTGACTTCAACTCTACTCATTTGAGGATCTACCTAGAGACCTGTTTGTCTCCTTaGGGCTTGATCATAGGGCTG +
Preference number: 5 (lower is better)
Translates to: MSERSFDFNSTHLRIYLETCLSP*GLIIGL
Trigger: CAGCCCTATGATCAAGCCCAAAGGAGACAAACAGGT...CTCTAGGTAGATCCTCAAATGAGTAGAGTTGAAGTCAAAGGACCTTTCTGACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CAA 90 bp AATTGCTTGATTATGTCAGAAAGGTCCTTTGACTTCAACTCTACTCATTTGAGGGAGCAACAGGTAGTCTaGAGGATCCTCCTGAATGCC +
Preference number: 5 (lower is better)
Translates to: NCLIMSERSFDFNSTHLREQQVV*RILLNA
Trigger: GGCATTCAGGAGGATCCTCAAGACTACCTGTTGCTC...CCTCAAATGAGTAGAGTTGAAGTCAAAGGACCTTTCTGACATAATCAAGCAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
ENST00000512843.1
CDS-3UTR CAA 90 bp TTGATTATGTCAGAAAGGTCCTTTGACTTCAACTCTACTCATTTGAGGATCTACGAGCAACAGGTAGTCTaGAGGATCCTCCTGAATGCC +
Preference number: 5 (lower is better)
Translates to: LIMSERSFDFNSTHLRIYEQQVV*RILLNA
Trigger: GGCATTCAGGAGGATCCTCAAGACTACCTGTTGCTC...GTAGATCCTCAAATGAGTAGAGTTGAAGTCAAAGGACCTTTCTGACATAATCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
ENST00000512843.1
CDS-3UTR CAA 90 bp CTTCAACTCTACTCATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTCAGAAGAGGTGGATTTaGCAGAATCAGCATGCGTTC +
Preference number: 5 (lower is better)
Translates to: LQLYSFEDLPRVEVSSHSQKRWI*QNQHAF
Trigger: GAACGCATGCTGATTCTGCAAAATCCACCTCTTCTG...AGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAAATGAGTAGAGTTGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CAA 90 bp TTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAAAAGGGATTTATACTTTTCTGTCTGGCTaGAGGTTCCTATCCACGGGG +
Preference number: 5 (lower is better)
Translates to: FEDLPRVEVSSHSSKGIYTFLSG*RFLSTG
Trigger: CCCCGTGGATAGGAACCTCAAGCCAGACAGAAAAGT...ATAAATCCCTTTTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262994.8
ENST00000505913.5
CDS-3UTR CAA 90 bp TGCTTGATTATGTCAGAAAGGTCCTTTGACTTCAACTCTACTCATTTGAGGATCCGTGTGAGTCACTGCTaGAAGTTGTGCTATGCACTG +
Preference number: 5 (lower is better)
Translates to: CLIMSERSFDFNSTHLRIRVSHC*KLCYAL
Trigger: CAGTGCATAGCACAACTTCAAGCAGTGACTCACACG...GATCCTCAAATGAGTAGAGTTGAAGTCAAAGGACCTTTCTGACATAATCAAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CAA 90 bp CATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAAAAGGGATTTTTGTCTCCTTTGGGCTaGATCATAGGGCTGCTTCCT +
Preference number: 5 (lower is better)
Translates to: HLRIYLEWKCQVILQKGFLSPLG*IIGLLP
Trigger: AGGAAGCAGCCCTATGATCAAGCCCAAAGGAGACAA...AAATCCCTTTTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CAA 90 bp TTCAACTCTACTCATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTACCTGTTTGTCTCCTTaGGGCTTGATCATAGGGCTG +
Preference number: 5 (lower is better)
Translates to: FNSTHLRIYLEWKCQVILTCLSP*GLIIGL
Trigger: CAGCCCTATGATCAAGCCCAAAGGAGACAAACAGGT...AAGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAAATGAGTAGAGTTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CAA 90 bp GAGTGTGTTAACTGTGGAACAAATGTTTCTCTGGGAGCTAAACAATACTATTTTGAGCAACAGGTAGTCTaGAGGATCCTCCTGAATGCC +
Preference number: 5 (lower is better)
Translates to: ECVNCGTNVSLGAKQYYFEQQVV*RILLNA
Trigger: GGCATTCAGGAGGATCCTCAAGACTACCTGTTGCTC...AAAATAGTATTGTTTAGCTCCCAGAGAAACATTTGTTCCACAGTTAACACACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CAA 90 bp TTGTTCAGATACCACAAAGCACCACTTAAGTCTAAATTGCTTGATTATGTCAGAGAGCAACAGGTAGTCTaGAGGATCCTCCTGAATGCC +
Preference number: 5 (lower is better)
Translates to: LFRYHKAPLKSKLLDYVREQQVV*RILLNA
Trigger: GGCATTCAGGAGGATCCTCAAGACTACCTGTTGCTC...TCTGACATAATCAAGCAATTTAGACTTAAGTGGTGCTTTGTGGTATCTGAACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
ENST00000512843.1
CDS-3UTR CAA 90 bp CATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAAAAGGGATTTCAGAAGAGGTGGATTTaGCAGAATCAGCATGCGTTC +
Preference number: 5 (lower is better)
Translates to: HLRIYLEWKCQVILQKGFQKRWI*QNQHAF
Trigger: GAACGCATGCTGATTCTGCAAAATCCACCTCTTCTG...AAATCCCTTTTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CAA 90 bp GACTTCAACTCTACTCATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCATCCAGTTCTTCACTaGAAACACTTCCCACTGTCA +
Preference number: 5 (lower is better)
Translates to: DFNSTHLRIYLEWKCQVIHPVLH*KHFPLS
Trigger: TGACAGTGGGAAGTGTTTCAAGTGAAGAACTGGATG...AATGACTTGACACTTCCACTCTAGGTAGATCCTCAAATGAGTAGAGTTGAAGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CAA 90 bp AGTCTAAATTGCTTGATTATGTCAGAAAGGTCCTTTGACTTCAACTCTACTCATACTTTTCTGTCTGGCTaGAGGTTCCTATCCACGGGG +
Preference number: 5 (lower is better)
Translates to: SLNCLIMSERSFDFNSTHTFLSG*RFLSTG
Trigger: CCCCGTGGATAGGAACCTCAAGCCAGACAGAAAAGT...ATGAGTAGAGTTGAAGTCAAAGGACCTTTCTGACATAATCAAGCAATTTAGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262994.8
ENST00000505913.5
CDS-3UTR CAA 90 bp AGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAAAAGGGATTTATCTTTCGTGTGAGTCACTGCTaGAAGTTGTGCTATGCACTG +
Preference number: 5 (lower is better)
Translates to: RIYLEWKCQVILQKGFIFRVSHC*KLCYAL
Trigger: CAGTGCATAGCACAACTTCAAGCAGTGACTCACACG...AAAGATAAATCCCTTTTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CAA 90 bp TTTGACTTCAACTCTACTCATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCCTTCACTGGACAGGTTaGGGTTCATGGGAACATAAT +
Preference number: 5 (lower is better)
Translates to: FDFNSTHLRIYLEWKCQVLHWTG*GSWEHN
Trigger: ATTATGTTCCCATGAACCCAAACCTGTCCAGTGAAG...GACTTGACACTTCCACTCTAGGTAGATCCTCAAATGAGTAGAGTTGAAGTCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CAA 90 bp GTTAACTGTGGAACAAATGTTTCTCTGGGAGCTAAACAATACTATTTTCCCACATTGTCTCCTTTGGGCTaGATCATAGGGCTGCTTCCT +
Preference number: 5 (lower is better)
Translates to: VNCGTNVSLGAKQYYFPTLSPLG*IIGLLP
Trigger: AGGAAGCAGCCCTATGATCAAGCCCAAAGGAGACAA...TGTGGGAAAATAGTATTGTTTAGCTCCCAGAGAAACATTTGTTCCACAGTTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CAA 90 bp AACTCCCAAAGGAATTATGGTAAGGTACATTGGGAAAACCCAGAACAATGTTTTTTGTCTCCTTTGGGCTaGATCATAGGGCTGCTTCCT +
Preference number: 5 (lower is better)
Translates to: NSQRNYGKVHWENPEQCFLSPLG*IIGLLP
Trigger: AGGAAGCAGCCCTATGATCAAGCCCAAAGGAGACAA...AAAACATTGTTCTGGGTTTTCCCAATGTACCTTACCATAATTCCTTTGGGAGTT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CAA 90 bp GAAAGGTCCTTTGACTTCAACTCTACTCATTTGAGGATCTACCTAGAGTGGAAGTTCAACTCTACTCATTaGAGGATCTACCTAGAGTGG +
Preference number: 5 (lower is better)
Translates to: ERSFDFNSTHLRIYLEWKFNSTH*RIYLEW
Trigger: CCACTCTAGGTAGATCCTCAAATGAGTAGAGTTGAA...CTTCCACTCTAGGTAGATCCTCAAATGAGTAGAGTTGAAGTCAAAGGACCTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
ENST00000512843.1
CDS TCA 90 bp GCCCTGCAATCTTGTCCTCTCAAACATCTCCATCAGCTAATAAGATaGGGTAATCAATGTGCAGCTTTACTGTGTAATCTTCATGCAAAG +
Preference number: 5 (lower is better)
Translates to: ALQSCPLKHLHQLIR*GNQCAALLCNLHAK
Trigger: CTTTGCATGAAGATTACACAGTAAAGCTGCACATTGATTACCTCATCTTATTAGCTGATGGAGATGTTTGAGAGGACAAGATTGCAGGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515388.1
CDS CCA 90 bp ATGCGTTTAAGTAGTAAACCACCACTATTCTTAACACAGTCCCTATaGGCAATGACAATGATCAAGCTCTTAGGATCAAATCCTGGTAGC +
Preference number: 5 (lower is better)
Translates to: MRLSSKPPLFLTQSL*AMTMIKLLGSNPGS
Trigger: GCTACCAGGATTTGATCCTAAGAGCTTGATCATTGTCATTGCCCATAGGGACTGTGTTAAGAATAGTGGTGGTTTACTACTTAAACGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515388.1
CDS-3UTR CAA 90 bp TCATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAAAAGGGATTGAAGGGACGTTATCATaGCAGTCTGTTTCAGAAGAG +
Preference number: 5 (lower is better)
Translates to: SFEDLPRVEVSSHSSKGIEGTLS*QSVSEE
Trigger: CTCTTCTGAAACAGACTGCAATGATAACGTCCCTTC...AATCCCTTTTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CAA 90 bp AGTAATACTACGAGTGTGTTAACTGTGGAACAAATGTTTCTCTGGGAGCTAAACCATCCAGTTCTTCACTaGAAACACTTCCCACTGTCA +
Preference number: 5 (lower is better)
Translates to: SNTTSVLTVEQMFLWELNHPVLH*KHFPLS
Trigger: TGACAGTGGGAAGTGTTTCAAGTGAAGAACTGGATG...GTTTAGCTCCCAGAGAAACATTTGTTCCACAGTTAACACACTCGTAGTATTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CAA 90 bp CTAAATTGCTTGATTATGTCAGAAAGGTCCTTTGACTTCAACTCTACTCATTTGCGTGTGAGTCACTGCTaGAAGTTGTGCTATGCACTG +
Preference number: 5 (lower is better)
Translates to: LNCLIMSERSFDFNSTHLRVSHC*KLCYAL
Trigger: CAGTGCATAGCACAACTTCAAGCAGTGACTCACACG...CAAATGAGTAGAGTTGAAGTCAAAGGACCTTTCTGACATAATCAAGCAATTTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CAA 90 bp TCATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAAAAGGGATTCTTCACTGGACAGGTTaGGGTTCATGGGAACATAAT +
Preference number: 5 (lower is better)
Translates to: SFEDLPRVEVSSHSSKGILHWTG*GSWEHN
Trigger: ATTATGTTCCCATGAACCCAAACCTGTCCAGTGAAG...AATCCCTTTTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CAA 90 bp AGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAAAAGGGATTTATCTTTTACTGCCAAAGAGATTaGGGTCTTCACTGGACAGGT +
Preference number: 5 (lower is better)
Translates to: RIYLEWKCQVILQKGFIFYCQRD*GLHWTG
Trigger: ACCTGTCCAGTGAAGACCCAAATCTCTTTGGCAGTA...AAAGATAAATCCCTTTTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CAA 90 bp AGTGTGTTAACTGTGGAACAAATGTTTCTCTGGGAGCTAAACAATACTATTTTCACCTGTTTGTCTCCTTaGGGCTTGATCATAGGGCTG +
Preference number: 5 (lower is better)
Translates to: SVLTVEQMFLWELNNTIFTCLSP*GLIIGL
Trigger: CAGCCCTATGATCAAGCCCAAAGGAGACAAACAGGT...GAAAATAGTATTGTTTAGCTCCCAGAGAAACATTTGTTCCACAGTTAACACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CAA 90 bp CATGTTATGAATTGTTCAGATACCACAAAGCACCACTTAAGTCTAAATTGCTTGTTCGGGCTTCTTGCTTaGACAGTTGATGAGCAACAG +
Preference number: 5 (lower is better)
Translates to: HVMNCSDTTKHHLSLNCLFGLLA*TVDEQQ
Trigger: CTGTTGCTCATCAACTGTCAAAGCAAGAAGCCCGAA...CAAGCAATTTAGACTTAAGTGGTGCTTTGTGGTATCTGAACAATTCATAACATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
ENST00000512843.1
CDS-3UTR CAA 90 bp GAGTGTGTTAACTGTGGAACAAATGTTTCTCTGGGAGCTAAACAATACTATTTTCAGAAGAGGTGGATTTaGCAGAATCAGCATGCGTTC +
Preference number: 5 (lower is better)
Translates to: ECVNCGTNVSLGAKQYYFQKRWI*QNQHAF
Trigger: GAACGCATGCTGATTCTGCAAAATCCACCTCTTCTG...AAAATAGTATTGTTTAGCTCCCAGAGAAACATTTGTTCCACAGTTAACACACTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CAA 90 bp TTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAAAAGGGATTTATGAAGGGACGTTATCATaGCAGTCTGTTTCAGAAGAG +
Preference number: 5 (lower is better)
Translates to: FEDLPRVEVSSHSSKGIYEGTLS*QSVSEE
Trigger: CTCTTCTGAAACAGACTGCAATGATAACGTCCCTTC...ATAAATCCCTTTTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CAA 90 bp AGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAAAAGGGATTTATCTTTGAAGGGACGTTATCATaGCAGTCTGTTTCAGAAGAG +
Preference number: 5 (lower is better)
Translates to: RIYLEWKCQVILQKGFIFEGTLS*QSVSEE
Trigger: CTCTTCTGAAACAGACTGCAATGATAACGTCCCTTC...AAAGATAAATCCCTTTTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CAA 90 bp TTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAAAAGGGATTTATCATCTGCTTCAGTACTaGATGGAGACACCTTTGGTA +
Preference number: 5 (lower is better)
Translates to: FEDLPRVEVSSHSSKGIYHLLQY*METPLV
Trigger: TACCAAAGGTGTCTCCATCAAGTACTGAAGCAGATG...ATAAATCCCTTTTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CAA 90 bp AACTCCCAAAGGAATTATGGTAAGGTACATTGGGAAAACCCAGAACAATGTTTTCATCTGCTTCAGTACTaGATGGAGACACCTTTGGTA +
Preference number: 5 (lower is better)
Translates to: NSQRNYGKVHWENPEQCFHLLQY*METPLV
Trigger: TACCAAAGGTGTCTCCATCAAGTACTGAAGCAGATG...AAAACATTGTTCTGGGTTTTCCCAATGTACCTTACCATAATTCCTTTGGGAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CAA 90 bp CATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAAAAGGGATTTAGATACATGCCTCATTaGAGTCTCTACACTCGATGT +
Preference number: 5 (lower is better)
Translates to: HLRIYLEWKCQVILQKGFRYMPH*SLYTRC
Trigger: ACATCGAGTGTAGAGACTCAAATGAGGCATGTATCT...AAATCCCTTTTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CAA 90 bp TTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAAAAGGGATTTATCAGATACATGCCTCATTaGAGTCTCTACACTCGATGT +
Preference number: 5 (lower is better)
Translates to: LRIYLEWKCQVILQKGFIRYMPH*SLYTRC
Trigger: ACATCGAGTGTAGAGACTCAAATGAGGCATGTATCT...GATAAATCCCTTTTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CAA 90 bp TCCTTTGACTTCAACTCTACTCATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTGAATTGGGATTCATaGGGACGTAATTTTCATCCA +
Preference number: 5 (lower is better)
Translates to: SFDFNSTHLRIYLEWKCQVNWDS*GRNFHP
Trigger: TGGATGAAAATTACGTCCCAATGAATCCCAATTCAC...TTGACACTTCCACTCTAGGTAGATCCTCAAATGAGTAGAGTTGAAGTCAAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CAA 90 bp TGCTTGATTATGTCAGAAAGGTCCTTTGACTTCAACTCTACTCATTTGAGGATCATGTTCCTGGAGTCATaGGCACATAATTTGCTTCCT +
Preference number: 5 (lower is better)
Translates to: CLIMSERSFDFNSTHLRIMFLES*AHNLLP
Trigger: AGGAAGCAAATTATGTGCCAATGACTCCAGGAACAT...GATCCTCAAATGAGTAGAGTTGAAGTCAAAGGACCTTTCTGACATAATCAAGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CAA 90 bp AGTGTGTTAACTGTGGAACAAATGTTTCTCTGGGAGCTAAACAATACTATTTTCTACTGCCAAAGAGATTaGGGTCTTCACTGGACAGGT +
Preference number: 5 (lower is better)
Translates to: SVLTVEQMFLWELNNTIFYCQRD*GLHWTG
Trigger: ACCTGTCCAGTGAAGACCCAAATCTCTTTGGCAGTA...GAAAATAGTATTGTTTAGCTCCCAGAGAAACATTTGTTCCACAGTTAACACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CAA 90 bp AATACTACGAGTGTGTTAACTGTGGAACAAATGTTTCTCTGGGAGCTAAACAATAAGTATTCCACCTGTTaGTCTCCTTTGGGCTTGATC +
Preference number: 5 (lower is better)
Translates to: NTTSVLTVEQMFLWELNNKYSTC*SPLGLI
Trigger: GATCAAGCCCAAAGGAGACAAACAGGTGGAATACTT...ATTGTTTAGCTCCCAGAGAAACATTTGTTCCACAGTTAACACACTCGTAGTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CAA 90 bp GTTAACTGTGGAACAAATGTTTCTCTGGGAGCTAAACAATACTATTTTCCCACAAAGTATTCCACCTGTTaGTCTCCTTTGGGCTTGATC +
Preference number: 5 (lower is better)
Translates to: VNCGTNVSLGAKQYYFPTKYSTC*SPLGLI
Trigger: GATCAAGCCCAAAGGAGACAAACAGGTGGAATACTT...TGTGGGAAAATAGTATTGTTTAGCTCCCAGAGAAACATTTGTTCCACAGTTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CAA 90 bp AGTAATACTACGAGTGTGTTAACTGTGGAACAAATGTTTCTCTGGGAGCTAAACAGCCAAGGTCTTCTGTaGGTCAACAACAACATAATC +
Preference number: 5 (lower is better)
Translates to: SNTTSVLTVEQMFLWELNSQGLL*VNNNII
Trigger: GATTATGTTGTTGTTGACCAACAGAAGACCTTGGCT...GTTTAGCTCCCAGAGAAACATTTGTTCCACAGTTAACACACTCGTAGTATTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CAA 90 bp TGCTTGATTATGTCAGAAAGGTCCTTTGACTTCAACTCTACTCATTTGAGGATCTTCAACTCTACTCATTaGAGGATCTACCTAGAGTGG +
Preference number: 5 (lower is better)
Translates to: CLIMSERSFDFNSTHLRIFNSTH*RIYLEW
Trigger: CCACTCTAGGTAGATCCTCAAATGAGTAGAGTTGAA...GATCCTCAAATGAGTAGAGTTGAAGTCAAAGGACCTTTCTGACATAATCAAGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
ENST00000512843.1
CDS-3UTR CAA 90 bp TTTGACTTCAACTCTACTCATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCTGTCAGAAAGGTCCTTaGACTTCAACTCTACTCATT +
Preference number: 5 (lower is better)
Translates to: FDFNSTHLRIYLEWKCQVCQKGP*TSTLLI
Trigger: AATGAGTAGAGTTGAAGTCAAAGGACCTTTCTGACA...GACTTGACACTTCCACTCTAGGTAGATCCTCAAATGAGTAGAGTTGAAGTCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
ENST00000512843.1
CDS-3UTR CAA 90 bp CTTCAACTCTACTCATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTGTCAGAAAGGTCCTTaGACTTCAACTCTACTCATT +
Preference number: 5 (lower is better)
Translates to: LQLYSFEDLPRVEVSSHSCQKGP*TSTLLI
Trigger: AATGAGTAGAGTTGAAGTCAAAGGACCTTTCTGACA...AGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAAATGAGTAGAGTTGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
ENST00000512843.1
CDS-3UTR CAA 90 bp TCCTTTGACTTCAACTCTACTCATTTGAGGATCTACCTAGAGTGGAAGTGTCAATTTTCAGAAATCTGGTaGGAAGGAGTCCATGACTAT +
Preference number: 5 (lower is better)
Translates to: SFDFNSTHLRIYLEWKCQFSEIW*EGVHDY
Trigger: ATAGTCATGGACTCCTTCCAACCAGATTTCTGAAAA...TTGACACTTCCACTCTAGGTAGATCCTCAAATGAGTAGAGTTGAAGTCAAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262995.8
CDS-3UTR CAA 90 bp AGTAATACTACGAGTGTGTTAACTGTGGAACAAATGTTTCTCTGGGAGCTAAACAAGTGCTTTAGACCCTaGATAGGCAGCTGTAAAGAT +
Preference number: 5 (lower is better)
Translates to: SNTTSVLTVEQMFLWELNKCFRP*IGSCKD
Trigger: ATCTTTACAGCTGCCTATCAAGGGTCTAAAGCACTT...GTTTAGCTCCCAGAGAAACATTTGTTCCACAGTTAACACACTCGTAGTATTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262995.8
CDS TCA 90 bp GCCAAGGTCAATTATACTTACAAAGTGGTTATGGAAGCCTTCAAGTaGACTAGATCTATCACTTGGAAATGCTCGTGGAATATCATAGCA +
Preference number: 5 (lower is better)
Translates to: AKVNYTYKVVMEAFK*TRSITWKCSWNIIA
Trigger: TGCTATGATATTCCACGAGCATTTCCAAGTGATAGATCTAGTTCACTTGAAGGCTTCCATAACCACTTTGTAAGTATAATTGACCTTGGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507334.1
CDS-3UTR CAA 90 bp AACTCTACTCATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAATTGATGGAGACACCTTaGGTAAAACATCATGGGAAT +
Preference number: 5 (lower is better)
Translates to: NSTHLRIYLEWKCQVILQLMETP*VKHHGN
Trigger: ATTCCCATGATGTTTTACCAAAGGTGTCTCCATCAA...TTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAAATGAGTAGAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CAA 90 bp AGTGTGTTAACTGTGGAACAAATGTTTCTCTGGGAGCTAAACAATACTATTTTCCATCTGCTTCAGTACTaGATGGAGACACCTTTGGTA +
Preference number: 5 (lower is better)
Translates to: SVLTVEQMFLWELNNTIFHLLQY*METPLV
Trigger: TACCAAAGGTGTCTCCATCAAGTACTGAAGCAGATG...GAAAATAGTATTGTTTAGCTCCCAGAGAAACATTTGTTCCACAGTTAACACACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CAA 90 bp AATACTACGAGTGTGTTAACTGTGGAACAAATGTTTCTCTGGGAGCTAAACAATAGATACATGCCTCATTaGAGTCTCTACACTCGATGT +
Preference number: 5 (lower is better)
Translates to: NTTSVLTVEQMFLWELNNRYMPH*SLYTRC
Trigger: ACATCGAGTGTAGAGACTCAAATGAGGCATGTATCT...ATTGTTTAGCTCCCAGAGAAACATTTGTTCCACAGTTAACACACTCGTAGTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CAA 90 bp TACTCATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAAAAGGGAATATCATAGCAGTCTaGAGAACTAGCATCTTTTCG +
Preference number: 5 (lower is better)
Translates to: YSFEDLPRVEVSSHSSKGNIIAV*RTSIFS
Trigger: CGAAAAGATGCTAGTTCTCAAGACTGCTATGATATT...CCCTTTTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAAATGAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CAA 90 bp TTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAAAAGGGATTTATATGTTCCTGGAGTCATaGGCACATAATTTGCTTCCT +
Preference number: 5 (lower is better)
Translates to: FEDLPRVEVSSHSSKGIYMFLES*AHNLLP
Trigger: AGGAAGCAAATTATGTGCCAATGACTCCAGGAACAT...ATAAATCCCTTTTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CAA 90 bp GGGAGCTTTTTCTATTTACTTAGAGAGGATCATGACTTGTGTTTCAACATGATTCTTCACTGGACAGGTTaGGGTTCATGGGAACATAAT +
Preference number: 5 (lower is better)
Translates to: GSFFYLLREDHDLCFNMILHWTG*GSWEHN
Trigger: ATTATGTTCCCATGAACCCAAACCTGTCCAGTGAAG...AATCATGTTGAAACACAAGTCATGATCCTCTCTAAGTAAATAGAAAAAGCTCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262995.8
CDS-3UTR CAA 90 bp CTAAATTGCTTGATTATGTCAGAAAGGTCCTTTGACTTCAACTCTACTCATTTGAAGTATTCCACCTGTTaGTCTCCTTTGGGCTTGATC +
Preference number: 5 (lower is better)
Translates to: LNCLIMSERSFDFNSTHLKYSTC*SPLGLI
Trigger: GATCAAGCCCAAAGGAGACAAACAGGTGGAATACTT...CAAATGAGTAGAGTTGAAGTCAAAGGACCTTTCTGACATAATCAAGCAATTTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CAA 90 bp AATACTACGAGTGTGTTAACTGTGGAACAAATGTTTCTCTGGGAGCTAAACAATAGCCAAGGTCTTCTGTaGGTCAACAACAACATAATC +
Preference number: 5 (lower is better)
Translates to: NTTSVLTVEQMFLWELNNSQGLL*VNNNII
Trigger: GATTATGTTGTTGTTGACCAACAGAAGACCTTGGCT...ATTGTTTAGCTCCCAGAGAAACATTTGTTCCACAGTTAACACACTCGTAGTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CAA 90 bp TTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAAAAGGGATTTATTTCAACTCTACTCATTaGAGGATCTACCTAGAGTGG +
Preference number: 5 (lower is better)
Translates to: FEDLPRVEVSSHSSKGIYFNSTH*RIYLEW
Trigger: CCACTCTAGGTAGATCCTCAAATGAGTAGAGTTGAA...ATAAATCCCTTTTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
ENST00000512843.1
CDS-3UTR CAA 90 bp TTGTTCAGATACCACAAAGCACCACTTAAGTCTAAATTGCTTGATTATGTCAGACATGCCATCAATGATTaGCAGGCTTACTTGGTAGTG +
Preference number: 5 (lower is better)
Translates to: LFRYHKAPLKSKLLDYVRHAIND*QAYLVV
Trigger: CACTACCAAGTAAGCCTGCAAATCATTGATGGCATG...TCTGACATAATCAAGCAATTTAGACTTAAGTGGTGCTTTGTGGTATCTGAACAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262995.8
CDS-3UTR CAA 90 bp GAAAATAATCTTGAAGAAGATAGCCTCACCCTACCCAAACTTCCCAAATATGATCACAACCAAAGCTCATaGTCTAAACCTGATCAGTGT +
Preference number: 5 (lower is better)
Translates to: ENNLEEDSLTLPKLPKYDHNQSS*SKPDQC
Trigger: ACACTGATCAGGTTTAGACAATGAGCTTTGGTTGTG...ATCATATTTGGGAAGTTTGGGTAGGGTGAGGCTATCTTCTTCAAGATTATTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262995.8
CDS-3UTR CAA 90 bp TACTACGAGTGTGTTAACTGTGGAACAAATGTTTCTCTGGGAGCTAAACAATACAGGCTCCAATATTTCTaGAATTGGGGCAGTGAATAT +
Preference number: 5 (lower is better)
Translates to: YYECVNCGTNVSLGAKQYRLQYF*NWGSEY
Trigger: ATATTCACTGCCCCAATTCAAGAAATATTGGAGCCT...GTATTGTTTAGCTCCCAGAGAAACATTTGTTCCACAGTTAACACACTCGTAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262995.8
CDS-3UTR CAA 90 bp TTCAGATACCACAAAGCACCACTTAAGTCTAAATTGCTTGATTATGTCAGAAAGGGGCATAGCTATAAATaGGCTGCTGGTTTCATCAAC +
Preference number: 5 (lower is better)
Translates to: FRYHKAPLKSKLLDYVRKGHSYK*AAGFIN
Trigger: GTTGATGAAACCAGCAGCCAATTTATAGCTATGCCC...CTTTCTGACATAATCAAGCAATTTAGACTTAAGTGGTGCTTTGTGGTATCTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262995.8
CDS-3UTR CAA 90 bp GAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAAAAGGGATTTATCTTGGCAGAATTGGGTTTTaGATGCAGATAAAGACTCTA +
Preference number: 5 (lower is better)
Translates to: EDLPRVEVSSHSSKGIYLGRIGF*MQIKTL
Trigger: TAGAGTCTTTATCTGCATCAAAAACCCAATTCTGCC...AAGATAAATCCCTTTTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262995.8
CDS CCA 90 bp ATACACTTGATGATGCCAAGGTCAATTATACTTACAAAGTGGTTATaGAAGCCTTCAAGTGAACTAGATCTATCACTTGGAAATGCTCGT +
Preference number: 5 (lower is better)
Translates to: IHLMMPRSIILTKWL*KPSSELDLSLGNAR
Trigger: ACGAGCATTTCCAAGTGATAGATCTAGTTCACTTGAAGGCTTCCATAACCACTTTGTAAGTATAATTGACCTTGGCATCATCAAGTGTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507334.1
CDS CCA 90 bp ATATTTATTGAATATTTATTGAACATGTTCCACTGTTCTAGCCGCTaGAGGGATAGTGGTTCCAGAAACAAAACTGTCTACCTCAGCAAA +
Preference number: 5 (lower is better)
Translates to: IFIEYLLNMFHCSSR*RDSGSRNKTVYLSK
Trigger: TTTGCTGAGGTAGACAGTTTTGTTTCTGGAACCACTATCCCTCCAGCGGCTAGAACAGTGGAACATGTTCAATAAATATTCAATAAATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515388.1
CDS-3UTR CAA 90 bp AGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAAAAGGGATTTATCTTTTTGATGGAGACACCTTaGGTAAAACATCATGGGAAT +
Preference number: 5 (lower is better)
Translates to: RIYLEWKCQVILQKGFIFLMETP*VKHHGN
Trigger: ATTCCCATGATGTTTTACCAAAGGTGTCTCCATCAA...AAAGATAAATCCCTTTTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CAA 90 bp AATACTACGAGTGTGTTAACTGTGGAACAAATGTTTCTCTGGGAGCTAAACAATTTGATGGAGACACCTTaGGTAAAACATCATGGGAAT +
Preference number: 5 (lower is better)
Translates to: NTTSVLTVEQMFLWELNNLMETP*VKHHGN
Trigger: ATTCCCATGATGTTTTACCAAAGGTGTCTCCATCAA...ATTGTTTAGCTCCCAGAGAAACATTTGTTCCACAGTTAACACACTCGTAGTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CAA 90 bp AACTCTACTCATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAAGCATCTTTTCGCAATTaGTTTAAATCCACAGTGGAA +
Preference number: 5 (lower is better)
Translates to: NSTHLRIYLEWKCQVILQASFRN*FKSTVE
Trigger: TTCCACTGTGGATTTAAACAAATTGCGAAAAGATGC...TTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAAATGAGTAGAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CAA 90 bp TCATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAAAAGGGATTAATATCATAGCAGTCTaGAGAACTAGCATCTTTTCG +
Preference number: 5 (lower is better)
Translates to: SFEDLPRVEVSSHSSKGINIIAV*RTSIFS
Trigger: CGAAAAGATGCTAGTTCTCAAGACTGCTATGATATT...AATCCCTTTTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAAATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CAA 90 bp GAAAATAATCTTGAAGAAGATAGCCTCACCCTACCCAAACTTCCCAAATATGATGTGAATTGGGATTCATaGGGACGTAATTTTCATCCA +
Preference number: 5 (lower is better)
Translates to: ENNLEEDSLTLPKLPKYDVNWDS*GRNFHP
Trigger: TGGATGAAAATTACGTCCCAATGAATCCCAATTCAC...ATCATATTTGGGAAGTTTGGGTAGGGTGAGGCTATCTTCTTCAAGATTATTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262995.8
CDS-3UTR CAA 90 bp GGGAGCTTTTTCTATTTACTTAGAGAGGATCATGACTTGTGTTTCAACATGATTATGTTCCTGGAGTCATaGGCACATAATTTGCTTCCT +
Preference number: 5 (lower is better)
Translates to: GSFFYLLREDHDLCFNMIMFLES*AHNLLP
Trigger: AGGAAGCAAATTATGTGCCAATGACTCCAGGAACAT...AATCATGTTGAAACACAAGTCATGATCCTCTCTAAGTAAATAGAAAAAGCTCCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262995.8
CDS-3UTR CAA 90 bp CTAAATTGCTTGATTATGTCAGAAAGGTCCTTTGACTTCAACTCTACTCATTTGAGCCAAGGTCTTCTGTaGGTCAACAACAACATAATC +
Preference number: 5 (lower is better)
Translates to: LNCLIMSERSFDFNSTHLSQGLL*VNNNII
Trigger: GATTATGTTGTTGTTGACCAACAGAAGACCTTGGCT...CAAATGAGTAGAGTTGAAGTCAAAGGACCTTTCTGACATAATCAAGCAATTTAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CAA 90 bp TTCAGATACCACAAAGCACCACTTAAGTCTAAATTGCTTGATTATGTCAGAAAGTTCAACTCTACTCATTaGAGGATCTACCTAGAGTGG +
Preference number: 5 (lower is better)
Translates to: FRYHKAPLKSKLLDYVRKFNSTH*RIYLEW
Trigger: CCACTCTAGGTAGATCCTCAAATGAGTAGAGTTGAA...CTTTCTGACATAATCAAGCAATTTAGACTTAAGTGGTGCTTTGTGGTATCTGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
ENST00000512843.1
CDS-3UTR CAA 90 bp AGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTCAAAAGGGATTTATCTTTTGTCAGAAAGGTCCTTaGACTTCAACTCTACTCATT +
Preference number: 5 (lower is better)
Translates to: RIYLEWKCQVILQKGFIFCQKGP*TSTLLI
Trigger: AATGAGTAGAGTTGAAGTCAAAGGACCTTTCTGACA...AAAGATAAATCCCTTTTGAAGAATGACTTGACACTTCCACTCTAGGTAGATCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
ENST00000512843.1
CDS-3UTR CAA 90 bp TTCAACTCTACTCATTTGAGGATCTACCTAGAGTGGAAGTGTCAAGTCATTCTTGATTTAGTGAGATCTTaGTTGCAGAAAATGAGTGAC +
Preference number: 5 (lower is better)
Translates to: FNSTHLRIYLEWKCQVILDLVRS*LQKMSD
Trigger: GTCACTCATTTTCTGCAACAAAGATCTCACTAAATC...AAGAATGACTTGACACTTCCACTCTAGGTAGATCCTCAAATGAGTAGAGTTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262995.8
CDS TCA 90 bp TGTCAACACATTTTTGACTTTAAAGTGGTTATGGAAGCCTTCAAGTaGACTAGATCTATCACTTGGAAATGCTCGTGGAATATCATAGCA +
Preference number: 5 (lower is better)
Translates to: CQHIFDFKVVMEAFK*TRSITWKCSWNIIA
Trigger: TGCTATGATATTCCACGAGCATTTCCAAGTGATAGATCTAGTTCACTTGAAGGCTTCCATAACCACTTTAAAGTCAAAAATGTGTTGACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
ENST00000507070.5
ENST00000510615.1
CDS CCA 90 bp AAACTATCAACATTTATTCCCATCTTTGCCAGCTCTCAGGGTCATTaGGATGACCTATTATCTTTCTCTCATTATACATATGCATACACA +
Preference number: 5 (lower is better)
Translates to: KLSTFIPIFASSQGH*DDLLSFSHYTYAYT
Trigger: TGTGTATGCATATGTATAATGAGAGAAAGATAATAGGTCATCCCAATGACCCTGAGAGCTGGCAAAGATGGGAATAAATGTTGATAGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507070.5
ENST00000510615.1
CDS-3UTR CAA 90 bp TTGATTATGTCAGAAAGGTCCTTTGACTTCAACTCTACTCATTTGAGGATCTACGCATCTTTTCGCAATTaGTTTAAATCCACAGTGGAA +
Preference number: 5 (lower is better)
Translates to: LIMSERSFDFNSTHLRIYASFRN*FKSTVE
Trigger: TTCCACTGTGGATTTAAACAAATTGCGAAAAGATGC...GTAGATCCTCAAATGAGTAGAGTTGAAGTCAAAGGACCTTTCTGACATAATCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CAA 90 bp CTAAATTGCTTGATTATGTCAGAAAGGTCCTTTGACTTCAACTCTACTCATTTGGTGAATTGGGATTCATaGGGACGTAATTTTCATCCA +
Preference number: 5 (lower is better)
Translates to: LNCLIMSERSFDFNSTHLVNWDS*GRNFHP
Trigger: TGGATGAAAATTACGTCCCAATGAATCCCAATTCAC...CAAATGAGTAGAGTTGAAGTCAAAGGACCTTTCTGACATAATCAAGCAATTTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CAA 90 bp CTAAATTGCTTGATTATGTCAGAAAGGTCCTTTGACTTCAACTCTACTCATTTGTGTCAGAAAGGTCCTTaGACTTCAACTCTACTCATT +
Preference number: 5 (lower is better)
Translates to: LNCLIMSERSFDFNSTHLCQKGP*TSTLLI
Trigger: AATGAGTAGAGTTGAAGTCAAAGGACCTTTCTGACA...CAAATGAGTAGAGTTGAAGTCAAAGGACCTTTCTGACATAATCAAGCAATTTAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
ENST00000512843.1
CDS-3UTR CAA 90 bp AATACTACGAGTGTGTTAACTGTGGAACAAATGTTTCTCTGGGAGCTAAACAATGTGTATCCACTTAATTaGTTCATATGTCCAATCCCT +
Preference number: 5 (lower is better)
Translates to: NTTSVLTVEQMFLWELNNVYPLN*FICPIP
Trigger: AGGGATTGGACATATGAACAAATTAAGTGGATACAC...ATTGTTTAGCTCCCAGAGAAACATTTGTTCCACAGTTAACACACTCGTAGTATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262995.8
CDS-3UTR CAA 90 bp TTGATTATGTCAGAAAGGTCCTTTGACTTCAACTCTACTCATTTGAGGATCTACAGCTATGTTAATACCTaGACCAATCAGTTTGCTGAA +
Preference number: 5 (lower is better)
Translates to: LIMSERSFDFNSTHLRIYSYVNT*TNQFAE
Trigger: TTCAGCAAACTGATTGGTCAAGGTATTAACATAGCT...GTAGATCCTCAAATGAGTAGAGTTGAAGTCAAAGGACCTTTCTGACATAATCAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262995.8
CDS-3UTR CAA 90 bp CATGTTATGAATTGTTCAGATACCACAAAGCACCACTTAAGTCTAAATTGCTTGGCATCTTTTCGCAATTaGTTTAAATCCACAGTGGAA +
Preference number: 5 (lower is better)
Translates to: HVMNCSDTTKHHLSLNCLASFRN*FKSTVE
Trigger: TTCCACTGTGGATTTAAACAAATTGCGAAAAGATGC...CAAGCAATTTAGACTTAAGTGGTGCTTTGTGGTATCTGAACAATTCATAACATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CAA 90 bp TTGTTCAGATACCACAAAGCACCACTTAAGTCTAAATTGCTTGATTATGTCAGAAATATCATAGCAGTCTaGAGAACTAGCATCTTTTCG +
Preference number: 5 (lower is better)
Translates to: LFRYHKAPLKSKLLDYVRNIIAV*RTSIFS
Trigger: CGAAAAGATGCTAGTTCTCAAGACTGCTATGATATT...TCTGACATAATCAAGCAATTTAGACTTAAGTGGTGCTTTGTGGTATCTGAACAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS-3UTR CAA 90 bp AGTCTAAATTGCTTGATTATGTCAGAAAGGTCCTTTGACTTCAACTCTACTCATCATAGCCTCACCAAGTaGACACATAATATTAACCAT +
Preference number: 5 (lower is better)
Translates to: SLNCLIMSERSFDFNSTHHSLTK*THNINH
Trigger: ATGGTTAATATTATGTGTCAACTTGGTGAGGCTATG...ATGAGTAGAGTTGAAGTCAAAGGACCTTTCTGACATAATCAAGCAATTTAGACT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262995.8
CDS GCA 72 bp AGGGGCGGCGGGCGCGCTCCCGACACAGCCGACGCCTaGCGAGCGCGCAGTGGCGAGAACCTAGCTCTCCTG +
Preference number: 6 (lower is better)
Translates to: RGGGRAPDTADA*RARSGENLALL
Trigger: CAGGAGAGCTAGGTTCTCGCCACTGCGCGCTCGGCAGGCGTCGGCTGTGTCGGGAGCGCGCCCGCCGCCCCT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262994.8
ENST00000262995.8
CDS CCA 72 bp CGCTCCCGACACAGCCGACGCCTGCCGAGCGCGCAGTaGCGAGAACCTAGCTCTCCTGGTCGCGCACCCCGG +
Preference number: 6 (lower is better)
Translates to: RSRHSRRLPSAQ*REPSSPGRAPR
Trigger: CCGGGGTGCGCGACCAGGAGAGCTAGGTTCTCGCCACTGCGCGCTCGGCAGGCGTCGGCTGTGTCGGGAGCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262994.8
ENST00000262995.8
CDS GCA 72 bp GCCATCCGGAGCAGACCACTTCACCACCGCTCATGGTaGGCGCGTCTCGGGCTCCGGGCCGGGCAGCTGAGG +
Preference number: 6 (lower is better)
Translates to: AIRSRPLHHRSW*ARLGLRAGQLR
Trigger: CCTCAGCTGCCCGGCCCGGAGCCCGAGACGCGCGCACCATGAGCGGTGGTGAAGTGGTCTGCTCCGGATGGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262994.8
ENST00000262995.8
CDS CCA 72 bp GGAGCCATCCGGAGCAGACCACTTCACCACCGCTCATaGTGCGCGCGTCTCGGGCTCCGGGCCGGGCAGCTG +
Preference number: 6 (lower is better)
Translates to: GAIRSRPLHHRS*CARLGLRAGQL
Trigger: CAGCTGCCCGGCCCGGAGCCCGAGACGCGCGCACCATGAGCGGTGGTGAAGTGGTCTGCTCCGGATGGCTCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262994.8
ENST00000262995.8
CDS TCA 72 bp ACGAGTTCGAGTCTCTCCTCTGCAGGCCCACGAACCTaGACAGAACGCGAGCCGGGGCCGCGGGCGCGCCGG +
Preference number: 6 (lower is better)
Translates to: TSSSLSSAGPRT*TEREPGPRARR
Trigger: CCGGCGCGCCCGCGGCCCCGGCTCGCGTTCTGTTCAGGTTCGTGGGCCTGCAGAGGAGAGACTCGAACTCGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262994.8
ENST00000262995.8
CDS CCA 72 bp GAACCTAGCTCTCCTGGTCGCGCACCCCGGACGGACTaGGCGGACAGACTCCACGGTGCGCGGGTTCCACGA +
Preference number: 6 (lower is better)
Translates to: EPSSPGRAPRTD*ADRLHGARVPR
Trigger: TCGTGGAACCCGCGCACCGTGGAGTCTGTCCGCCCAGTCCGTCCGGGGTGCGCGACCAGGAGAGCTAGGTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262994.8
ENST00000262995.8
CDS GCA 72 bp CGCACCCCGGACGGACTGGGCGGACAGACTCCACGGTaGGCGGGTTCCACGAGTTCGAGTCTCTCCTCTGCA +
Preference number: 6 (lower is better)
Translates to: RTPDGLGGQTPR*AGSTSSSLSSA
Trigger: TGCAGAGGAGAGACTCGAACTCGTGGAACCCGCGCACCGTGGAGTCTGTCCGCCCAGTCCGTCCGGGGTGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262994.8
ENST00000262995.8
CDS GCA 72 bp CAGCTGCCTCAGCAGCGCTCGGACTCAGCGGGACTCTaGCCCGACTCGGTGCCGGAGCTTCTGTCCTTTGCG +
Preference number: 6 (lower is better)
Translates to: QLPQQRSDSAGL*PDSVPELLSFA
Trigger: CGCAAAGGACAGAAGCTCCGGCACCGAGTCGGGGCAGAGTCCCGCTGAGTCCGAGCGCTGCTGAGGCAGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262995.8
CDS GCA 72 bp ACGGTGCGCGGGTTCCACGAGTTCGAGTCTCTCCTCTaGAGGCCCACGAACCTGAACAGAACGCGAGCCGGG +
Preference number: 6 (lower is better)
Translates to: TVRGFHEFESLL*RPTNLNRTRAG
Trigger: CCCGGCTCGCGTTCTGTTCAGGTTCGTGGGCCTGCAGAGGAGAGACTCGAACTCGTGGAACCCGCGCACCGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262994.8
ENST00000262995.8
CDS TCA 72 bp CGTGGGATACTACACGTTTCCACAGGAGATCGGTCATaGGCTGGATGTGGTTTCGGTGGCCGAGGTGGAGGA +
Preference number: 6 (lower is better)
Translates to: RGILHVSTGDRS*AGCGFGGRGGG
Trigger: TCCTCCACCTCGGCCACCGAAACCACATCCAGCTCATGACCGATCTCCTGTGGAAACGTGTAGTATCCCACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
ENST00000507334.1
CDS TCA 72 bp GAACTGGCCTTCTGGGAGGGGTTTTTGGGCTGGACCTaGAGCCCATATGAGCAGGAGGAGGAACTTGCATTC +
Preference number: 6 (lower is better)
Translates to: ELAFWEGFLGWT*SPYEQEEELAF
Trigger: GAATGCAAGTTCCTCCTCCTGCTCATATGGGCTTCAGGTCCAGCCCAAAAACCCCTCCCAGAAGGCCAGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
ENST00000507070.5
ENST00000508833.1
ENST00000510615.1
CDS TCA 72 bp CCCTGCTGTAGGGATACAGTAACTACTGTCAGTGTCTaGGGCGGTGCGTGGGATACTACACGTTTCCACAGG +
Preference number: 6 (lower is better)
Translates to: PCCRDTVTTVSV*GGAWDTTRFHR
Trigger: CCTGTGGAAACGTGTAGTATCCCACGCACCGCCTCAGACACTGACAGTAGTTACTGTATCCCTACAGCAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
ENST00000507334.1
CDS CCA 72 bp ACACGTTTCCACAGGAGATCGGTCATGAGCTGGATGTaGTTTCGGTGGCCGAGGTGGAGGAATATCTGGAAT +
Preference number: 6 (lower is better)
Translates to: TRFHRRSVMSWM*FRWPRWRNIWN
Trigger: ATTCCAGATATTCCTCCACCTCGGCCACCGAAACCACATCCAGCTCATGACCGATCTCCTGTGGAAACGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
ENST00000507334.1
CDS CCA 72 bp GATACTACACGTTTCCACAGGAGATCGGTCATGAGCTaGATGTGGTTTCGGTGGCCGAGGTGGAGGAATATC +
Preference number: 6 (lower is better)
Translates to: DTTRFHRRSVMS*MWFRWPRWRNI
Trigger: GATATTCCTCCACCTCGGCCACCGAAACCACATCCAGCTCATGACCGATCTCCTGTGGAAACGTGTAGTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
ENST00000507334.1
CDS CCA 72 bp CATCATGGGAATAACTCCTGGGCAGGTTATAAAGGCTaGAGTCAACTGAAGCAGATGGGGCACGTGAAGGTG +
Preference number: 6 (lower is better)
Translates to: HHGNNSWAGYKG*SQLKQMGHVKV
Trigger: CACCTTCACGTGCCCCATCTGCTTCAGTTGACTCCAGCCTTTATAACCTGCCCAGGAGTTATTCCCATGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS TCA 72 bp AACATAATCCACTCTCTCATCTGCTACACTGCTGCCTaGGCCACTGCTCTTTTGCTTACGTGGTGGTGTGGA +
Preference number: 6 (lower is better)
Translates to: NIIHSLICYTAA*ATALLLTWWCG
Trigger: TCCACACCACCACGTAAGCAAAAGAGCAGTGGCTCAGGCAGCAGTGTAGCAGATGAGAGAGTGGATTATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
ENST00000511109.1
CDS GCA 72 bp CAACAACATAATCCACTCTCTCATCTGCTACACTGCTaGCTGAGCCACTGCTCTTTTGCTTACGTGGTGGTG +
Preference number: 6 (lower is better)
Translates to: QQHNPLSHLLHC*LSHCSFAYVVV
Trigger: CACCACCACGTAAGCAAAAGAGCAGTGGCTCAGGCAGCAGTGTAGCAGATGAGAGAGTGGATTATGTTGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
ENST00000511109.1
CDS CCA 72 bp CATGCCTCATCCATATGCCCTCTCCTTCAACAGGAATaGGTGCTGACAAGACTGGCACACAAATTTCATCCT +
Preference number: 6 (lower is better)
Translates to: HASSICPLLQQE*VLTRLAHKFHP
Trigger: AGGATGAAATTTGTGTGCCAGTCTTGTCAGCACCCATTCCTGTTGAAGGAGAGGGCATATGGATGAGGCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509992.1
CDS CAA 90 bp TTTTGCAGAATCAGCATGCGTTCTGGTGGGTTCGGGCTTCTTGCTTaGACAGTTGATGAGCAACAGGTAGTCTTGAGGATCCTCCTGAAT +
Preference number: 6 (lower is better)
Translates to: FCRISMRSGGFGLLA*TVDEQQVVLRILLN
Trigger: ATTCAGGAGGATCCTCAAGACTACCTGTTGCTCATCAACTGTCAAAGCAAGAAGCCCGAACCCACCAGAACGCATGCTGATTCTGCAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS TCA 72 bp GCAATATTTTCATTTCACACTCTTCGCTGGCGTTTCTaGTTCTGTGGACTGTCTCCCATCTGTCCAGGCTTC +
Preference number: 6 (lower is better)
Translates to: AIFSFHTLRWRF*FCGLSPICPGF
Trigger: GAAGCCTGGACAGATGGGAGACAGTCCACAGAATCAGAAACGCCAGCGAAGAGTGTGAAATGAAAATATTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
ENST00000511109.1
CDS GCA 72 bp GTTATCATTGCAGTCTGTTTCAGAAGAGGTGGATTTTaGAGAATCAGCATGCGTTCTGGTGGGTTCGGGCTT +
Preference number: 6 (lower is better)
Translates to: VIIAVCFRRGGF*RISMRSGGFGL
Trigger: AAGCCCGAACCCACCAGAACGCATGCTGATTCTGCAAAATCCACCTCTTCTGAAACAGACTGCAATGATAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS GCA 72 bp TGGGAACATAATTCTCTTCACTGTCGTGTGAGTCACTaGTTGAAGTTGTGCTATGCACTGAATCTGGTCGGG +
Preference number: 6 (lower is better)
Translates to: WEHNSLHCRVSH*LKLCYALNLVG
Trigger: CCCGACCAGATTCAGTGCATAGCACAACTTCAAGCAGTGACTCACACGACAGTGAAGAGAATTATGTTCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
ENST00000508833.1
CDS GCA 72 bp ATTCCAAAACATCTGGATCTCCAGTTAAACGGCCACTaGGTAACACGAACCATCTCCTCTTCCATGCCTTTC +
Preference number: 6 (lower is better)
Translates to: IPKHLDLQLNGH*VTRTISSSMPF
Trigger: GAAAGGCATGGAAGAGGAGATGGTTCGTGTTACGCAGTGGCCGTTTAACTGGAGATCCAGATGTTTTGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505913.5
CDS GCA 72 bp ATTCCAAAACATCTGGATCTCCAGTTAAACGGCCACTaGGTAACACGAACCATCTCCTCTTCCATGCTGTTG +
Preference number: 6 (lower is better)
Translates to: IPKHLDLQLNGH*VTRTISSSMLL
Trigger: CAACAGCATGGAAGAGGAGATGGTTCGTGTTACGCAGTGGCCGTTTAACTGGAGATCCAGATGTTTTGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515366.5
CDS GCA 72 bp ATTCCAAAACATCTGGATCTCCAGTTAAACGGCCACTaGGTAACACGAACCATCTCCTCTTCCATGCCTCAT +
Preference number: 6 (lower is better)
Translates to: IPKHLDLQLNGH*VTRTISSSMPH
Trigger: ATGAGGCATGGAAGAGGAGATGGTTCGTGTTACGCAGTGGCCGTTTAACTGGAGATCCAGATGTTTTGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509992.1
CDS CAA 90 bp CCAGAATCTAAGTCGAGATCTAAGTATTCCACCTGTTTGTCTCCTTaGGGCTTGATCATAGGGCTGCTTCCTCCATCAAGACTGTTACTG +
Preference number: 6 (lower is better)
Translates to: PESKSRSKYSTCLSP*GLIIGLLPPSRLLL
Trigger: CAGTAACAGTCTTGATGGAGGAAGCAGCCCTATGATCAAGCCCAAAGGAGACAAACAGGTGGAATACTTAGATCTCGACTTAGATTCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
ENST00000511109.1
CDS CAA 90 bp GTGGATTTCCCAGAATCTAAGTCGAGATCTAAGTATTCCACCTGTTaGTCTCCTTTGGGCTTGATCATAGGGCTGCTTCCTCCATCAAGA +
Preference number: 6 (lower is better)
Translates to: VDFPESKSRSKYSTC*SPLGLIIGLLPPSR
Trigger: TCTTGATGGAGGAAGCAGCCCTATGATCAAGCCCAAAGGAGACAAACAGGTGGAATACTTAGATCTCGACTTAGATTCTGGGAAATCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
ENST00000511109.1
CDS CAA 90 bp ACCAATCTGGGCAACACAGTGAGACTATGCATGAGAAACTCTGAATaGCCTAATTTCAGTCCCAATGCGTCTCAGTCTGCAGATCCTCTA +
Preference number: 6 (lower is better)
Translates to: TNLGNTVRLCMRNSE*PNFSPNASQSADPL
Trigger: TAGAGGATCTGCAGACTGAGACGCATTGGGACTGAAATTAGGCAATTCAGAGTTTCTCATGCATAGTCTCACTGTGTTGCCCAGATTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515366.5
CDS CCA 72 bp AGAGATTTGGGTCTTCACTGGACAGGTTTGGGTTCATaGGAACATAATTCTCTTCACTGTCGTGTGAGTCAC +
Preference number: 6 (lower is better)
Translates to: RDLGLHWTGLGS*EHNSLHCRVSH
Trigger: GTGACTCACACGACAGTGAAGAGAATTATGTTCCCATGAACCCAAACCTGTCCAGTGAAGACCCAAATCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS CCA 72 bp TGCCTGAGCCACTGCTCTTTTGCTTACGTGGTGGTGTaGATTTCCCAGAATCTAAGTCGAGATCTAAGTATT +
Preference number: 6 (lower is better)
Translates to: CLSHCSFAYVVV*ISQNLSRDLSI
Trigger: AATACTTAGATCTCGACTTAGATTCTGGGAAATCCACACCACCACGTAAGCAAAAGAGCAGTGGCTCAGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
ENST00000511109.1
CDS CCA 72 bp ACTGTTATGGGTCTTCACTGGACAGGTTTGGGTTCATaGGAACATAATTCTCTTCACTGTCGTGTGAGTCAC +
Preference number: 6 (lower is better)
Translates to: TVMGLHWTGLGS*EHNSLHCRVSH
Trigger: GTGACTCACACGACAGTGAAGAGAATTATGTTCCCATGAACCCAAACCTGTCCAGTGAAGACCCATAACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508833.1
CDS CAA 72 bp GTTCTCCATCTGCTTCAGTACTTGATGGAGACACCTTaGGTAAAACATCATGGGAATAACTCCTGGGCAGGT +
Preference number: 6 (lower is better)
Translates to: VLHLLQYLMETP*VKHHGNNSWAG
Trigger: ACCTGCCCAGGAGTTATTCCCATGATGTTTTACCAAAGGTGTCTCCATCAAGTACTGAAGCAGATGGAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS CAA 72 bp AAGTCGAGATCTAAGTATTCCACCTGTTTGTCTCCTTaGGGCTTGATCATAGGGCTGCTTCCTCCATCAAGA +
Preference number: 6 (lower is better)
Translates to: KSRSKYSTCLSP*GLIIGLLPPSR
Trigger: TCTTGATGGAGGAAGCAGCCCTATGATCAAGCCCAAAGGAGACAAACAGGTGGAATACTTAGATCTCGACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
ENST00000511109.1
CDS CAA 72 bp CCAGAATCTAAGTCGAGATCTAAGTATTCCACCTGTTaGTCTCCTTTGGGCTTGATCATAGGGCTGCTTCCT +
Preference number: 6 (lower is better)
Translates to: PESKSRSKYSTC*SPLGLIIGLLP
Trigger: AGGAAGCAGCCCTATGATCAAGCCCAAAGGAGACAAACAGGTGGAATACTTAGATCTCGACTTAGATTCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
ENST00000511109.1
CDS CAA 72 bp GGCAACACAGTGAGACTATGCATGAGAAACTCTGAATaGCCTAATTTCAGTCCCAATGCGTCTCAGTCTGCA +
Preference number: 6 (lower is better)
Translates to: GNTVRLCMRNSE*PNFSPNASQSA
Trigger: TGCAGACTGAGACGCATTGGGACTGAAATTAGGCAATTCAGAGTTTCTCATGCATAGTCTCACTGTGTTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515366.5
CDS CAA 90 bp ACAATGATCAAGCTCTTAGGATCAAATCCTGGTAGCTGTACAGGCTaGAAAGCCCTGCAATCTTGTCCTCTCAAACATCTCCATCAGCTA +
Preference number: 6 (lower is better)
Translates to: TMIKLLGSNPGSCTG*KALQSCPLKHLHQL
Trigger: TAGCTGATGGAGATGTTTGAGAGGACAAGATTGCAGGGCTTTCAAGCCTGTACAGCTACCAGGATTTGATCCTAAGAGCTTGATCATTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515388.1
CDS CCA 72 bp ATGCCTCATTTGAGTCTCTACACTCGATGTCCCAGATaGGGTATTAAAAACATAGAGTTCTCCATCTGCTTC +
Preference number: 6 (lower is better)
Translates to: MPHLSLYTRCPR*GIKNIEFSICF
Trigger: GAAGCAGATGGAGAACTCTATGTTTTTAATACCCCATCTGGGACATCGAGTGTAGAGACTCAAATGAGGCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS CAA 72 bp CAGCTTTACTGTGTAATCTTCATGCAAAGCCATTACTaGAGTCCCCTGGCATCATCAAATACCCATCCTAGA +
Preference number: 6 (lower is better)
Translates to: QLYCVIFMQSHY*SPLASSNTHPR
Trigger: TCTAGGATGGGTATTTGATGATGCCAGGGGACTCAAGTAATGGCTTTGCATGAAGATTACACAGTAAAGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515388.1
CDS CAA 90 bp AAACATAGAGTTCTCCATCTGCTTCAGTACTTGATGGAGACACCTTaGGTAAAACATCATGGGAATAACTCCTGGGCAGGTTATAAAGGC +
Preference number: 6 (lower is better)
Translates to: KHRVLHLLQYLMETP*VKHHGNNSWAGYKG
Trigger: GCCTTTATAACCTGCCCAGGAGTTATTCCCATGATGTTTTACCAAAGGTGTCTCCATCAAGTACTGAAGCAGATGGAGAACTCTATGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS CAA 90 bp ATCAATGTGCAGCTTTACTGTGTAATCTTCATGCAAAGCCATTACTaGAGTCCCCTGGCATCATCAAATACCCATCCTAGAACACTCATC +
Preference number: 6 (lower is better)
Translates to: INVQLYCVIFMQSHY*SPLASSNTHPRTLI
Trigger: GATGAGTGTTCTAGGATGGGTATTTGATGATGCCAGGGGACTCAAGTAATGGCTTTGCATGAAGATTACACAGTAAAGCTGCACATTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515388.1
CDS CAA 72 bp TGGAGGAATGTCATAACTAATAGATACATGCCTCATTaGAGTCTCTACACTCGATGTCCCAGATGGGGTATT +
Preference number: 6 (lower is better)
Translates to: WRNVITNRYMPH*SLYTRCPRWGI
Trigger: AATACCCCATCTGGGACATCGAGTGTAGAGACTCAAATGAGGCATGTATCTATTAGTTATGACATTCCTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
ENST00000507334.1
CDS CAA 72 bp ACGGTCAGACATTCACCAGACATACCACTCGTACTGTaGAACATCTACGGAAGCCTAAATATTTGCTTTCAA +
Preference number: 6 (lower is better)
Translates to: TVRHSPDIPLVL*NIYGSLNICFQ
Trigger: TTGAAAGCAAATATTTAGGCTTCCGTAGATGTTCAACAGTACGAGTGGTATGTCTGGTGAATGTCTGACCGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511109.1
CDS CAA 90 bp ACCAGGTGTTGGAGGAATGTCATAACTAATAGATACATGCCTCATTaGAGTCTCTACACTCGATGTCCCAGATGGGGTATTAAAAACATA +
Preference number: 6 (lower is better)
Translates to: TRCWRNVITNRYMPH*SLYTRCPRWGIKNI
Trigger: TATGTTTTTAATACCCCATCTGGGACATCGAGTGTAGAGACTCAAATGAGGCATGTATCTATTAGTTATGACATTCCTCCAACACCTGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
ENST00000507334.1
CDS CAA 90 bp ACAAAATCAACGGTCAGACATTCACCAGACATACCACTCGTACTGTaGAACATCTACGGAAGCCTAAATATTTGCTTTCAAGAGGACATA +
Preference number: 6 (lower is better)
Translates to: TKSTVRHSPDIPLVL*NIYGSLNICFQEDI
Trigger: TATGTCCTCTTGAAAGCAAATATTTAGGCTTCCGTAGATGTTCAACAGTACGAGTGGTATGTCTGGTGAATGTCTGACCGTTGATTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511109.1
CDS GCA 72 bp AGGAAGCAGGATTTTTATGAGAAGGGACGTTATCATTaGAGTCTGTTTCAGAAGAGGTGGATTTTGCAGAAT +
Preference number: 6 (lower is better)
Translates to: RKQDFYEKGRYH*SLFQKRWILQN
Trigger: ATTCTGCAAAATCCACCTCTTCTGAAACAGACTGCAATGATAACGTCCCTTCTCATAAAAATCCTGCTTCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
CDS GCA 72 bp TTGCAGAATCAGCATGCGTTTGCAATGGAATCGTTTTaGTTTCAAAATCTTCTAGTAGAAGGTATTCCTCTC +
Preference number: 6 (lower is better)
Translates to: LQNQHAFAMESF*FQNLLVEGIPL
Trigger: GAGAGGAATACCTTCTACTAGAAGATTTTGAAAGCAAAACGATTCCATTGCAAACGCATGCTGATTCTGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514639.5
CDS CCA 72 bp AGTAGTAAACCACCACTATTCTTAACACAGTCCCTATaGGCAATGACAATGATCAAGCTCTTAGGATCAAAT +
Preference number: 6 (lower is better)
Translates to: SSKPPLFLTQSL*AMTMIKLLGSN
Trigger: ATTTGATCCTAAGAGCTTGATCATTGTCATTGCCCATAGGGACTGTGTTAAGAATAGTGGTGGTTTACTACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515388.1
CDS TCA 72 bp TCTTGTCCTCTCAAACATCTCCATCAGCTAATAAGATaGGGTAATCAATGTGCAGCTTTACTGTGTAATCTT +
Preference number: 6 (lower is better)
Translates to: SCPLKHLHQLIR*GNQCAALLCNL
Trigger: AAGATTACACAGTAAAGCTGCACATTGATTACCTCATCTTATTAGCTGATGGAGATGTTTGAGAGGACAAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515388.1
CDS GCA 72 bp AAAATCAAATGTTCCTGGAGTCATTGGCACATAATTTaGTTCCTGAATTGGTTCTGTAAAACTGCTGGAATG +
Preference number: 6 (lower is better)
Translates to: KIKCSWSHWHII*FLNWFCKTAGM
Trigger: CATTCCAGCAGTTTTACAGAACCAATTCAGGAAGCAAATTATGTGCCAATGACTCCAGGAACATTTGATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262994.8
ENST00000262995.8
ENST00000505913.5
ENST00000507070.5
ENST00000510615.1
CDS CCA 72 bp ATGATGCCAAGGTCAATTATACTTACAAAGTGGTTATaGAAGCCTTCAAGTGAACTAGATCTATCACTTGGA +
Preference number: 6 (lower is better)
Translates to: MMPRSIILTKWL*KPSSELDLSLG
Trigger: TCCAAGTGATAGATCTAGTTCACTTGAAGGCTTCCATAACCACTTTGTAAGTATAATTGACCTTGGCATCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507334.1
CDS CCA 72 bp CACTTGATGATGCCAAGGTCAATTATACTTACAAAGTaGTTATGGAAGCCTTCAAGTGAACTAGATCTATCA +
Preference number: 6 (lower is better)
Translates to: HLMMPRSIILTK*LWKPSSELDLS
Trigger: TGATAGATCTAGTTCACTTGAAGGCTTCCATAACCACTTTGTAAGTATAATTGACCTTGGCATCATCAAGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507334.1
CDS CCA 72 bp ACATTTATTCCCATCTTTGCCAGCTCTCAGGGTCATTaGGATGACCTATTATCTTTCTCTCATTATACATAT +
Preference number: 6 (lower is better)
Translates to: TFIPIFASSQGH*DDLLSFSHYTY
Trigger: ATATGTATAATGAGAGAAAGATAATAGGTCATCCCAATGACCCTGAGAGCTGGCAAAGATGGGAATAAATGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507070.5
ENST00000510615.1
CDS CAA 72 bp TTTGCAGAATCAGCATGCGTTTGCAATGGAATCGTTTaGCTTTCAAAATCTTCTAGTAGAAGGTATTCCTCT +
Preference number: 6 (lower is better)
Translates to: FAESACVCNGIV*LSKSSSRRYSS
Trigger: AGAGGAATACCTTCTACTAGAAGATTTTGAAAGCAAAACGATTCCATTGCAAACGCATGCTGATTCTGCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514639.5