RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for G6PC3 (Homo sapiens)

Ensembl gene IDs: ENSG00000141349

Ensembl transcript IDs: ENST00000269097.9, ENST00000585361.5, ENST00000585962.1, ENST00000588558.5, ENST00000590253.2, ENST00000590639.1, ENST00000591696.1, ENST00000593115.1

Found 281 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGTCAGGAAGAGTGGATGGGCGGTGCTTCCTGGGCACTGAACATGTaGACTGCCCAGGGCACGAGGGCCAGGACTAGGCATGGCCAGAGG +
Preference number: 1 (lower is better)
Translates to: SQEEWMGGASWALNM*TAQGTRARTRHGQR
Trigger: CCTCTGGCCATGCCTAGTCCTGGCCCTCGTGCCCTGGGCAGTGCACATGTTCAGTGCCCAGGAAGCACCGCCCATCCACTCTTCCTGACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000585361.5
ENST00000588558.5
ENST00000590253.2
3UTR GCA 90 bp AGTGGCCACCTGCGAAGACAGGGCCGTCATTATGGGCCAGAGGGCTaGTCCTGTGATCATGCAGTGTCCAGAAGGGCTGCCTGGACCAGT +
Preference number: 1 (lower is better)
Translates to: SGHLRRQGRHYGPEG*SCDHAVSRRAAWTS
Trigger: ACTGGTCCAGGCAGCCCTTCTGGACACTGCATGATCACAGGAGCAGCCCTCTGGCCCATAATGACGGCCCTGTCTTCGCAGGTGGCCACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585361.5
ENST00000588558.5
3UTR GCA 90 bp CATGGCCAGCACAAGGCAGGCTATCTTCTGGCCATTTCCCAGCTGTaGCCGACGCACCTGGGCATAGCAGGGAGAGTGCAAGGCAATGCC +
Preference number: 1 (lower is better)
Translates to: HGQHKAGYLLAISQL*PTHLGIAGRVQGNA
Trigger: GGCATTGCCTTGCACTCTCCCTGCTATGCCCAGGTGCGTCGGGCACAGCTGGGAAATGGCCAGAAGATAGCCTGCCTTGTGCTGGCCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000585361.5
ENST00000588558.5
ENST00000590253.2
3UTR TCA 90 bp CCTGCGAAGACAGGGCCGTCATTATGGGCCAGAGGGCTGCTCCTGTaGTCATGCAGTGTCCAGAAGGGCTGCCTGGACCAGTCTCACAAG +
Preference number: 1 (lower is better)
Translates to: PAKTGPSLWARGLLL*SCSVQKGCLDQSHK
Trigger: CTTGTGAGACTGGTCCAGGCAGCCCTTCTGGACACTGCATGATCACAGGAGCAGCCCTCTGGCCCATAATGACGGCCCTGTCTTCGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585361.5
ENST00000588558.5
3UTR TCA 90 bp AGCCAGCCCAGGACAGCGCCAGTTATTAGGCCAGCCAGCACCTGGTaGGGGAAATGTGCTAAGATGAAGATTCGCGACAAGCCAACCGCC +
Preference number: 1 (lower is better)
Translates to: SQPRTAPVIRPASTW*GKCAKMKIRDKPTA
Trigger: GGCGGTTGGCTTGTCGCGAATCTTCATCTTAGCACATTTCCCTCACCAGGTGCTGGCTGGCCTAATAACTGGCGCTGTCCTGGGCTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585361.5
ENST00000588558.5
3UTR CCA 90 bp GCCTGGACCAGTCTCACAAGAAGAGGGGAACTGGTGAACCTGGGCTaGAGCCTGGCTGTAGTAACCAGACTCATGGACCCACCAAAAGGG +
Preference number: 1 (lower is better)
Translates to: AWTSLTRRGELVNLG*SLAVVTRLMDPPKG
Trigger: CCCTTTTGGTGGGTCCATGAGTCTGGTTACTACAGCCAGGCTCCAGCCCAGGTTCACCAGTTCCCCTCTTCTTGTGAGACTGGTCCAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585361.5
ENST00000588558.5
3UTR GCA 90 bp TGCTGCCTATGCCGTTGGGCATGGTCCAGGGACCACACCTTAATCTaGAAGGTGTCTCTGTCCTTAGCAGCTACCGTGATGCCCAGCACA +
Preference number: 1 (lower is better)
Translates to: CCLCRWAWSRDHTLI*KVSLSLAATVMPST
Trigger: TGTGCTGGGCATCACGGTAGCTGCTAAGGACAGAGACACCTTGCAGATTAAGGTGTGGTCCCTGGACCATGCCCAACGGCATAGGCAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588558.5
ENST00000593115.1
3UTR TCA 90 bp CAGTTATTAGGCCAGCCAGCACCTGGTGAGGGAAATGTGCTAAGATaGAGATTCGCGACAAGCCAACCGCCAAAAGGAAGGTGCAATAAG +
Preference number: 1 (lower is better)
Translates to: QLLGQPAPGEGNVLR*RFATSQPPKGRCNK
Trigger: CTTATTGCACCTTCCTTTTGGCGGTTGGCTTGTCGCGAATCTTCATCTTAGCACATTTCCCTCACCAGGTGCTGGCTGGCCTAATAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585361.5
ENST00000588558.5
3UTR-3UTR CCA 90 bp GTGGCCACCTGCGAAGACAGGGCCGTCATTATGGGCCAGAGGGCTGCTCCTGTGCAGGGCCCTCGGGGGTaGGGACCAGGATGCCGGAGG +
Preference number: 2 (lower is better)
Translates to: VATCEDRAVIMGQRAAPVQGPRG*GPGCRR
Trigger: CCTCCGGCATCCTGGTCCCCACCCCCGAGGGCCCTG...CACAGGAGCAGCCCTCTGGCCCATAATGACGGCCCTGTCTTCGCAGGTGGCCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585361.5
3UTR-3UTR GCA 90 bp TGGATGGGCGGTGCTTCCTGGGCACTGAACATGTGCACTGCCCAGGGCACGAGGCCCTTACCCAGCGGCTaGGGGCCCGAGTGGCCACCT +
Preference number: 2 (lower is better)
Translates to: WMGGASWALNMCTAQGTRPLPSG*GPEWPP
Trigger: AGGTGGCCACTCGGGCCCGCAGCCGCTGGGTAAGGG...CCTCGTGCCCTGGGCAGTGCACATGTTCAGTGCCCAGGAAGCACCGCCCATCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585361.5
ENST00000588558.5
3UTR-3UTR CCA 90 bp ATTGGGGCCGCCCTGGCTGCCCCTCACAGTGTTGCAAGAACCCGCTGGTCTTGCGGGGCTGGAAGGGGATaGGGCTGCCTCCTGGAGTGT +
Preference number: 2 (lower is better)
Translates to: IGAALAAPHSVARTRWSCGAGRG*GCLLEC
Trigger: ACACTCCAGGAGGCAGCCCCATCCCCTTCCAGCCCC...GCAAGACCAGCGGGTTCTTGCAACACTGTGAGGGGCAGCCAGGGCGGCCCCAAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000269097.9
ENST00000590253.2
3UTR-3UTR CCA 90 bp GGGATGGGGCTGCCTCCTGGAGTGTGGTGGTCACAGAGTGTTGGCTTTGTGGGAGGCTGCGGGCCCGAGTaGCCACCTGCGAAGACAGGG +
Preference number: 2 (lower is better)
Translates to: GMGLPPGVWWSQSVGFVGGCGPE*PPAKTG
Trigger: CCCTGTCTTCGCAGGTGGCCACTCGGGCCCGCAGCC...TCCCACAAAGCCAACACTCTGTGACCACCACACTCCAGGAGGCAGCCCCATCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585361.5
ENST00000588558.5
3UTR-3UTR GCA 90 bp GGCTATCTTCTGGCCATTTCCCAGCTGTGCCCGACGCACCTGGGCATAGCAGGGGAGAGTGCAAGGCAATaGCCAGGCCCAGGGCAGCCC +
Preference number: 2 (lower is better)
Translates to: GYLLAISQLCPTHLGIAGESARQ*PGPGQP
Trigger: GGGCTGCCCTGGGCCTGGGCATTGCCTTGCACTCTC...CCCTGCTATGCCCAGGTGCGTCGGGCACAGCTGGGAAATGGCCAGAAGATAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000585361.5
ENST00000588558.5
ENST00000590253.2
3UTR-3UTR CCA 90 bp GGCTGCGGGCCCGAGTGGCCACCTGCGAAGACAGGGCCGTCATTATGGGCCAGACTGCCTCCTGGAGTGTaGTGGTCACAGAGTGTTGGC +
Preference number: 2 (lower is better)
Translates to: GCGPEWPPAKTGPSLWARLPPGV*WSQSVG
Trigger: GCCAACACTCTGTGACCACCACACTCCAGGAGGCAG...TCTGGCCCATAATGACGGCCCTGTCTTCGCAGGTGGCCACTCGGGCCCGCAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585361.5
ENST00000588558.5
3UTR-3UTR CCA 90 bp AGCCAGGCTAGGCATCACCCTTACCCAGCGGCTGCGGGCCCGAGTGGCCACCTGGGGGCTAAGACCAGGTaGTGCGGAAGCAGATTTAGG +
Preference number: 2 (lower is better)
Translates to: SQARHHPYPAAAGPSGHLGAKTR*CGSRFR
Trigger: CCTAAATCTGCTTCCGCACCACCTGGTCTTAGCCCC...CAGGTGGCCACTCGGGCCCGCAGCCGCTGGGTAAGGGTGATGCCTAGCCTGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000585361.5
ENST00000588558.5
3UTR-3UTR GCA 90 bp CACAAGGCAGGCTATCTTCTGGCCATTTCCCAGCTGTGCCCGACGCACCTGGGCGGAAGGGGATGGGGCTaGCTCCTGGAGTGTGGTGGT +
Preference number: 2 (lower is better)
Translates to: HKAGYLLAISQLCPTHLGGRGWG*LLECGG
Trigger: ACCACCACACTCCAGGAGGCAGCCCCATCCCCTTCC...GCCCAGGTGCGTCGGGCACAGCTGGGAAATGGCCAGAAGATAGCCTGCCTTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000585361.5
ENST00000588558.5
ENST00000590253.2
3UTR-3UTR GCA 90 bp GTGGATGGGCGGTGCTTCCTGGGCACTGAACATGTGCACTGCCCAGGGCACGAGGCCATTTCCCAGCTGTaGCCGACGCACCTGGGCATA +
Preference number: 2 (lower is better)
Translates to: VDGRCFLGTEHVHCPGHEAISQL*PTHLGI
Trigger: TATGCCCAGGTGCGTCGGGCACAGCTGGGAAATGGC...CTCGTGCCCTGGGCAGTGCACATGTTCAGTGCCCAGGAAGCACCGCCCATCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000585361.5
ENST00000588558.5
ENST00000590253.2
3UTR-3UTR CCA 90 bp CAGCACAAGGCAGGCTATCTTCTGGCCATTTCCCAGCTGTGCCCGACGCACCTGGGGGCTGGAAGGGGATaGGGCTGCCTCCTGGAGTGT +
Preference number: 2 (lower is better)
Translates to: QHKAGYLLAISQLCPTHLGAGRG*GCLLEC
Trigger: ACACTCCAGGAGGCAGCCCCATCCCCTTCCAGCCCC...CAGGTGCGTCGGGCACAGCTGGGAAATGGCCAGAAGATAGCCTGCCTTGTGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000585361.5
ENST00000588558.5
ENST00000590253.2
3UTR-3UTR CCA 90 bp CCGACGCACCTGGGCATAGCAGGGAGAGTGCAAGGCAATGCCCAGGCCCAGGGCGTGGTCACAGAGTGTTaGCTTTGTGGGAGGGAAAGG +
Preference number: 2 (lower is better)
Translates to: PTHLGIAGRVQGNAQAQGVVTEC*LCGRER
Trigger: CCTTTCCCTCCCACAAAGCCAACACTCTGTGACCAC...GCCCTGGGCCTGGGCATTGCCTTGCACTCTCCCTGCTATGCCCAGGTGCGTCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000585361.5
ENST00000588558.5
ENST00000590253.2
3UTR-3UTR CCA 90 bp GCACTCGGGGAGTCATCAGCCAGCCCAGGACAGCGCCAGTTATTAGGCCAGCCAACAGGGCCGTCATTATaGGCCAGAGGGCTGCTCCTG +
Preference number: 2 (lower is better)
Translates to: ALGESSASPGQRQLLGQPTGPSL*ARGLLL
Trigger: CAGGAGCAGCCCTCTGGCCCATAATGACGGCCCTGT...TGGCTGGCCTAATAACTGGCGCTGTCCTGGGCTGGCTGATGACTCCCCGAGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585361.5
ENST00000588558.5
3UTR-3UTR TCA 90 bp GTGGCCACCTGCGAAGACAGGGCCGTCATTATGGGCCAGAGGGCTGCTCCTGTGCCAAAAAGAAACACATaGCTCAGGGCCCTCGGGGGT +
Preference number: 2 (lower is better)
Translates to: VATCEDRAVIMGQRAAPVPKRNT*LRALGG
Trigger: ACCCCCGAGGGCCCTGAGTCATGTGTTTCTTTTTGG...CACAGGAGCAGCCCTCTGGCCCATAATGACGGCCCTGTCTTCGCAGGTGGCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000585361.5
3UTR-3UTR GCA 90 bp TATCTTCTGGCCATTTCCCAGCTGTGCCCGACGCACCTGGGCATAGCAGGGAGAGGAAGGGGATGGGGCTaGCTCCTGGAGTGTGGTGGT +
Preference number: 2 (lower is better)
Translates to: YLLAISQLCPTHLGIAGRGRGWG*LLECGG
Trigger: ACCACCACACTCCAGGAGGCAGCCCCATCCCCTTCC...TCTCCCTGCTATGCCCAGGTGCGTCGGGCACAGCTGGGAAATGGCCAGAAGATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000585361.5
ENST00000588558.5
ENST00000590253.2
3UTR-3UTR GCA 90 bp CTGCCTCCTGGAGTGTGGTGGTCACAGAGTGTTGGCTTTGTGGGAGGGAAAGGATGGGGCCGCCCTGGCTaGCCCTCACAGTGTTGCAAG +
Preference number: 2 (lower is better)
Translates to: LPPGVWWSQSVGFVGGKGWGRPG*PSQCCK
Trigger: CTTGCAACACTGTGAGGGGCAGCCAGGGCGGCCCCA...TCCTTTCCCTCCCACAAAGCCAACACTCTGTGACCACCACACTCCAGGAGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269097.9
ENST00000590253.2
3UTR-3UTR CCA 90 bp CCAGGACAGCGCCAGTTATTAGGCCAGCCAGCACCTGGTGAGGGAAATGTGCTAGGGGCTGGAAGGGGATaGGGCTGCCTCCTGGAGTGT +
Preference number: 2 (lower is better)
Translates to: PGQRQLLGQPAPGEGNVLGAGRG*GCLLEC
Trigger: ACACTCCAGGAGGCAGCCCCATCCCCTTCCAGCCCC...TAGCACATTTCCCTCACCAGGTGCTGGCTGGCCTAATAACTGGCGCTGTCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585361.5
ENST00000588558.5
3UTR-3UTR TCA 90 bp GGCCAGCACAAGGCAGGCTATCTTCTGGCCATTTCCCAGCTGTGCCCGACGCACCCAGCCAGCACCTGGTaGGGGAAATGTGCTAAGATG +
Preference number: 2 (lower is better)
Translates to: GQHKAGYLLAISQLCPTHPASTW*GKCAKM
Trigger: CATCTTAGCACATTTCCCTCACCAGGTGCTGGCTGG...GTGCGTCGGGCACAGCTGGGAAATGGCCAGAAGATAGCCTGCCTTGTGCTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585361.5
ENST00000588558.5
3UTR-3UTR GCA 90 bp GGTGAACCTGGGCTGGAGCCTGGCTGTAGTAACCAGACTCATGGACCCACCAAAGGAAGGGGATGGGGCTaGCTCCTGGAGTGTGGTGGT +
Preference number: 2 (lower is better)
Translates to: GEPGLEPGCSNQTHGPTKGRGWG*LLECGG
Trigger: ACCACCACACTCCAGGAGGCAGCCCCATCCCCTTCC...TTTGGTGGGTCCATGAGTCTGGTTACTACAGCCAGGCTCCAGCCCAGGTTCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585361.5
ENST00000588558.5
3UTR-3UTR CCA 90 bp GGCTATCTTCTGGCCATTTCCCAGCTGTGCCCGACGCACCTGGGCATAGCAGGGGGGGCTAAGACCAGGTaGTGCGGAAGCAGATTTAGG +
Preference number: 2 (lower is better)
Translates to: GYLLAISQLCPTHLGIAGGAKTR*CGSRFR
Trigger: CCTAAATCTGCTTCCGCACCACCTGGTCTTAGCCCC...CCCTGCTATGCCCAGGTGCGTCGGGCACAGCTGGGAAATGGCCAGAAGATAGCC
60% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000585361.5
ENST00000588558.5
ENST00000590253.2
3UTR-3UTR TCA 90 bp GCCAGCCCAGGACAGCGCCAGTTATTAGGCCAGCCAGCACCTGGTGAGGGAAATAGAGGGCTGCTCCTGTaGTCATGCAGTGTCCAGAAG +
Preference number: 2 (lower is better)
Translates to: ASPGQRQLLGQPAPGEGNRGLLL*SCSVQK
Trigger: CTTCTGGACACTGCATGATCACAGGAGCAGCCCTCT...ATTTCCCTCACCAGGTGCTGGCTGGCCTAATAACTGGCGCTGTCCTGGGCTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585361.5
ENST00000588558.5
3UTR-3UTR GCA 90 bp TGGAGTGTGGTGGTCACAGAGTGTTGGCTTTGTGGGAGGGAAAGGAAAGGGAGGGGAAGGGGATGGGGCTaGCTCCTGGAGTGTGGTGGT +
Preference number: 2 (lower is better)
Translates to: WSVVVTECWLCGRERKGRGRGWG*LLECGG
Trigger: ACCACCACACTCCAGGAGGCAGCCCCATCCCCTTCC...CCTCCCTTTCCTTTCCCTCCCACAAAGCCAACACTCTGTGACCACCACACTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000269097.9
ENST00000585361.5
ENST00000588558.5
ENST00000590253.2
3UTR-3UTR CCA 90 bp TATTGGGGCCGCCCTGGCTGCCCCTCACAGTGTTGCAAGAACCCGCTGGTCTTGGTGGTCACAGAGTGTTaGCTTTGTGGGAGGGAAAGG +
Preference number: 2 (lower is better)
Translates to: YWGRPGCPSQCCKNPLVLVVTEC*LCGRER
Trigger: CCTTTCCCTCCCACAAAGCCAACACTCTGTGACCAC...CAAGACCAGCGGGTTCTTGCAACACTGTGAGGGGCAGCCAGGGCGGCCCCAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269097.9
ENST00000590253.2
3UTR-3UTR CCA 90 bp AGTATTCAAGGGCTTTATTGGGGCCGCCCTGGCTGCCCCTCACAGTGTTGCAAGGATGGGGCTGCCTCCTaGAGTGTGGTGGTCACAGAG +
Preference number: 2 (lower is better)
Translates to: SIQGLYWGRPGCPSQCCKDGAAS*SVVVTE
Trigger: CTCTGTGACCACCACACTCCAGGAGGCAGCCCCATC...CTTGCAACACTGTGAGGGGCAGCCAGGGCGGCCCCAATAAAGCCCTTGAATACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269097.9
ENST00000590253.2
3UTR-3UTR CCA 90 bp GTGGATGGGCGGTGCTTCCTGGGCACTGAACATGTGCACTGCCCAGGGCACGAGGAGGACCAACTTATCTaGGAGAGAGAAGGCCCATCT +
Preference number: 2 (lower is better)
Translates to: VDGRCFLGTEHVHCPGHEEDQLI*EREGPS
Trigger: AGATGGGCCTTCTCTCTCCCAGATAAGTTGGTCCTC...CTCGTGCCCTGGGCAGTGCACATGTTCAGTGCCCAGGAAGCACCGCCCATCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000585361.5
ENST00000588558.5
ENST00000590253.2
3UTR-3UTR CCA 90 bp TATTGGGGCCGCCCTGGCTGCCCCTCACAGTGTTGCAAGAACCCGCTGGTCTTGGTTGCAAGAACCCGCTaGTCTTGCTGTTGCCTTTGC +
Preference number: 2 (lower is better)
Translates to: YWGRPGCPSQCCKNPLVLVARTR*SCCCLC
Trigger: GCAAAGGCAACAGCAAGACCAGCGGGTTCTTGCAAC...CAAGACCAGCGGGTTCTTGCAACACTGTGAGGGGCAGCCAGGGCGGCCCCAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269097.9
ENST00000590253.2
3UTR CAA 90 bp TATTCAAGGGCTTTATTGGGGCCGCCCTGGCTGCCCCTCACAGTGTaGCAAGAACCCGCTGGTCTTGCTGTTGCCTTTGCTCTTTGGGGG +
Preference number: 2 (lower is better)
Translates to: YSRALLGPPWLPLTV*QEPAGLAVAFALWG
Trigger: CCCCCAAAGAGCAAAGGCAACAGCAAGACCAGCGGGTTCTTGCAACACTGTGAGGGGCAGCCAGGGCGGCCCCAATAAAGCCCTTGAATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269097.9
ENST00000590253.2
3UTR-3UTR TCA 90 bp TGTATCCACTCAGGCCGCTCACACCACTTGAAGGCTAGGCTGATGGACCAAGAAGGCTGGTGCCTAGCATaGGGGCCAGTGCAGTCAACC +
Preference number: 2 (lower is better)
Translates to: CIHSGRSHHLKARLMDQEGWCLA*GPVQST
Trigger: GGTTGACTGCACTGGCCCTCATGCTAGGCACCAGCC...TTCTTGGTCCATCAGCCTAGCCTTCAAGTGGTGTGAGCGGCCTGAGTGGATACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585361.5
ENST00000588558.5
3UTR-3UTR GCA 90 bp TATTGGGGCCGCCCTGGCTGCCCCTCACAGTGTTGCAAGAACCCGCTGGTCTTGAGAACCCGCTGGTCTTaGTGTTGCCTTTGCTCTTTG +
Preference number: 2 (lower is better)
Translates to: YWGRPGCPSQCCKNPLVLRTRWS*CCLCSL
Trigger: CAAAGAGCAAAGGCAACAGCAAGACCAGCGGGTTCT...CAAGACCAGCGGGTTCTTGCAACACTGTGAGGGGCAGCCAGGGCGGCCCCAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269097.9
ENST00000590253.2
3UTR-3UTR CCA 90 bp AAGGGCTTTATTGGGGCCGCCCTGGCTGCCCCTCACAGTGTTGCAAGAACCCGCGAGGACCAACTTATCTaGGAGAGAGAAGGCCCATCT +
Preference number: 2 (lower is better)
Translates to: KGFIGAALAAPHSVARTREDQLI*EREGPS
Trigger: AGATGGGCCTTCTCTCTCCCAGATAAGTTGGTCCTC...GCGGGTTCTTGCAACACTGTGAGGGGCAGCCAGGGCGGCCCCAATAAAGCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269097.9
ENST00000590253.2
3UTR-3UTR CCA 90 bp AGGGCTTTATTGGGGCCGCCCTGGCTGCCCCTCACAGTGTTGCAAGAACCCGCTGAGGACCAACTTATCTaGGAGAGAGAAGGCCCATCT +
Preference number: 2 (lower is better)
Translates to: RALLGPPWLPLTVLQEPAEDQLI*EREGPS
Trigger: AGATGGGCCTTCTCTCTCCCAGATAAGTTGGTCCTC...AGCGGGTTCTTGCAACACTGTGAGGGGCAGCCAGGGCGGCCCCAATAAAGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269097.9
ENST00000590253.2
3UTR-3UTR CCA 90 bp GGGGGCTTGAGAGGAAAGGCAGAGGGAGGACCAACTTATCTGGGAGAGAGAAGGGGGGCTAAGACCAGGTaGTGCGGAAGCAGATTTAGG +
Preference number: 2 (lower is better)
Translates to: GGLRGKAEGGPTYLGERRGAKTR*CGSRFR
Trigger: CCTAAATCTGCTTCCGCACCACCTGGTCTTAGCCCC...CCTTCTCTCTCCCAGATAAGTTGGTCCTCCCTCTGCCTTTCCTCTCAAGCCCCC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000269097.9
ENST00000585361.5
ENST00000588558.5
ENST00000590253.2
3UTR-3UTR TCA 90 bp AGTAACCAGACTCATGGACCCACCAAAAGGGCCTGTCTCCAAAAAGAAACAGGGGAAGAGGGGAACTGGTaGACCTGGGCTGGAGCCTGG +
Preference number: 2 (lower is better)
Translates to: SNQTHGPTKRACLQKETGEEGNW*TWAGAW
Trigger: CCAGGCTCCAGCCCAGGTTCACCAGTTCCCCTCTTC...CCCTGTTTCTTTTTGGAGACAGGCCCTTTTGGTGGGTCCATGAGTCTGGTTACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000588558.5
3UTR-3UTR CCA 90 bp GAGCCTGGCTGTAGTAACCAGACTCATGGACCCACCAAAAGGGCCTGTCTCCAAGTGGTCACAGAGTGTTaGCTTTGTGGGAGGGAAAGG +
Preference number: 2 (lower is better)
Translates to: EPGCSNQTHGPTKRACLQVVTEC*LCGRER
Trigger: CCTTTCCCTCCCACAAAGCCAACACTCTGTGACCAC...TTGGAGACAGGCCCTTTTGGTGGGTCCATGAGTCTGGTTACTACAGCCAGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585361.5
ENST00000588558.5
3UTR-3UTR CCA 90 bp TGTATCCACTCAGGCCGCTCACACCACTTGAAGGCTAGGCTGATGGACCAAGAAGGGGCTAAGACCAGGTaGTGCGGAAGCAGATTTAGG +
Preference number: 2 (lower is better)
Translates to: CIHSGRSHHLKARLMDQEGAKTR*CGSRFR
Trigger: CCTAAATCTGCTTCCGCACCACCTGGTCTTAGCCCC...TTCTTGGTCCATCAGCCTAGCCTTCAAGTGGTGTGAGCGGCCTGAGTGGATACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585361.5
ENST00000588558.5
3UTR-3UTR CCA 90 bp GGTGAACCTGGGCTGGAGCCTGGCTGTAGTAACCAGACTCATGGACCCACCAAAGAGGACCAACTTATCTaGGAGAGAGAAGGCCCATCT +
Preference number: 2 (lower is better)
Translates to: GEPGLEPGCSNQTHGPTKEDQLI*EREGPS
Trigger: AGATGGGCCTTCTCTCTCCCAGATAAGTTGGTCCTC...TTTGGTGGGTCCATGAGTCTGGTTACTACAGCCAGGCTCCAGCCCAGGTTCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585361.5
ENST00000588558.5
3UTR-3UTR CCA 90 bp GATTCGCGACAAGCCAACCGCCAAAAGGAAGGTGCAATAAGCCAGGCTAGGCATGTGGTCACAGAGTGTTaGCTTTGTGGGAGGGAAAGG +
Preference number: 2 (lower is better)
Translates to: DSRQANRQKEGAISQARHVVTEC*LCGRER
Trigger: CCTTTCCCTCCCACAAAGCCAACACTCTGTGACCAC...ATGCCTAGCCTGGCTTATTGCACCTTCCTTTTGGCGGTTGGCTTGTCGCGAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585361.5
ENST00000588558.5
3UTR GCA 72 bp ACCCTTACCCAGCGGCTGCGGGCCCGAGTGGCCACCTaGGAAGACAGGGCCGTCATTATGGGCCAGAGGGCT +
Preference number: 3 (lower is better)
Translates to: TLTQRLRARVAT*EDRAVIMGQRA
Trigger: AGCCCTCTGGCCCATAATGACGGCCCTGTCTTCGCAGGTGGCCACTCGGGCCCGCAGCCGCTGGGTAAGGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585361.5
ENST00000588558.5
3UTR CCA 72 bp AGCAGCCCCATGGCCAGCACAAGGCAGGCTATCTTCTaGCCATTTCCCAGCTGTGCCCGACGCACCTGGGCA +
Preference number: 3 (lower is better)
Translates to: SSPMASTRQAIF*PFPSCARRTWA
Trigger: TGCCCAGGTGCGTCGGGCACAGCTGGGAAATGGCCAGAAGATAGCCTGCCTTGTGCTGGCCATGGGGCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000585361.5
ENST00000588558.5
ENST00000590253.2
3UTR-3UTR CAA 90 bp TTGGGGCCGCCCTGGCTGCCCCTCACAGTGTTGCAAGAACCCGCTGGTCTTGCTGGTGGTCACAGAGTGTaGGCTTTGTGGGAGGGAAAG +
Preference number: 3 (lower is better)
Translates to: LGPPWLPLTVLQEPAGLAGGHRV*ALWEGK
Trigger: CTTTCCCTCCCACAAAGCCAACACTCTGTGACCACC...AGCAAGACCAGCGGGTTCTTGCAACACTGTGAGGGGCAGCCAGGGCGGCCCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269097.9
ENST00000590253.2
3UTR-3UTR CAA 90 bp TGGATGGGCGGTGCTTCCTGGGCACTGAACATGTGCACTGCCCAGGGCACGAGGGGTGGTCACAGAGTGTaGGCTTTGTGGGAGGGAAAG +
Preference number: 3 (lower is better)
Translates to: WMGGASWALNMCTAQGTRGGHRV*ALWEGK
Trigger: CTTTCCCTCCCACAAAGCCAACACTCTGTGACCACC...CCTCGTGCCCTGGGCAGTGCACATGTTCAGTGCCCAGGAAGCACCGCCCATCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000585361.5
ENST00000588558.5
ENST00000590253.2
3UTR-3UTR CAA 90 bp TATTGGGGCCGCCCTGGCTGCCCCTCACAGTGTTGCAAGAACCCGCTGGTCTTGCTGCCCCTCACAGTGTaGCAAGAACCCGCTGGTCTT +
Preference number: 3 (lower is better)
Translates to: YWGRPGCPSQCCKNPLVLLPLTV*QEPAGL
Trigger: AAGACCAGCGGGTTCTTGCAACACTGTGAGGGGCAG...CAAGACCAGCGGGTTCTTGCAACACTGTGAGGGGCAGCCAGGGCGGCCCCAATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269097.9
ENST00000590253.2
3UTR-3UTR CAA 90 bp GGCTATCTTCTGGCCATTTCCCAGCTGTGCCCGACGCACCTGGGCATAGCAGGGCTGCCCCTCACAGTGTaGCAAGAACCCGCTGGTCTT +
Preference number: 3 (lower is better)
Translates to: GYLLAISQLCPTHLGIAGLPLTV*QEPAGL
Trigger: AAGACCAGCGGGTTCTTGCAACACTGTGAGGGGCAG...CCCTGCTATGCCCAGGTGCGTCGGGCACAGCTGGGAAATGGCCAGAAGATAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588558.5
ENST00000590253.2
3UTR-3UTR CAA 90 bp CTTTATTGGGGCCGCCCTGGCTGCCCCTCACAGTGTTGCAAGAACCCGCTGGTCCTGCCCCTCACAGTGTaGCAAGAACCCGCTGGTCTT +
Preference number: 3 (lower is better)
Translates to: LYWGRPGCPSQCCKNPLVLPLTV*QEPAGL
Trigger: AAGACCAGCGGGTTCTTGCAACACTGTGAGGGGCAG...GACCAGCGGGTTCTTGCAACACTGTGAGGGGCAGCCAGGGCGGCCCCAATAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269097.9
ENST00000590253.2
3UTR TCA 72 bp ACAGGGCCGTCATTATGGGCCAGAGGGCTGCTCCTGTaGTCATGCAGTGTCCAGAAGGGCTGCCTGGACCAG +
Preference number: 3 (lower is better)
Translates to: TGPSLWARGLLL*SCSVQKGCLDQ
Trigger: CTGGTCCAGGCAGCCCTTCTGGACACTGCATGATCACAGGAGCAGCCCTCTGGCCCATAATGACGGCCCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585361.5
ENST00000588558.5
3UTR GCA 72 bp CACAAGGCAGGCTATCTTCTGGCCATTTCCCAGCTGTaGCCGACGCACCTGGGCATAGCAGGGAGAGTGCAA +
Preference number: 3 (lower is better)
Translates to: HKAGYLLAISQL*PTHLGIAGRVQ
Trigger: TTGCACTCTCCCTGCTATGCCCAGGTGCGTCGGGCACAGCTGGGAAATGGCCAGAAGATAGCCTGCCTTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000585361.5
ENST00000588558.5
ENST00000590253.2
3UTR GCA 72 bp GAGGCACACAAGAAGTCAGGAAGAGTGGATGGGCGGTaGTTCCTGGGCACTGAACATGTGCACTGCCCAGGG +
Preference number: 3 (lower is better)
Translates to: EAHKKSGRVDGR*FLGTEHVHCPG
Trigger: CCCTGGGCAGTGCACATGTTCAGTGCCCAGGAAGCACCGCCCATCCACTCTTCCTGACTTCTTGTGTGCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000585361.5
ENST00000588558.5
ENST00000590253.2
3UTR CCA 72 bp ACAAGAAGTCAGGAAGAGTGGATGGGCGGTGCTTCCTaGGCACTGAACATGTGCACTGCCCAGGGCACGAGG +
Preference number: 3 (lower is better)
Translates to: TRSQEEWMGGAS*ALNMCTAQGTR
Trigger: CCTCGTGCCCTGGGCAGTGCACATGTTCAGTGCCCAGGAAGCACCGCCCATCCACTCTTCCTGACTTCTTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000585361.5
ENST00000588558.5
ENST00000590253.2
3UTR-3UTR CAA 90 bp GGGATGGGGCTGCCTCCTGGAGTGTGGTGGTCACAGAGTGTTGGCTTTGTGGGAGGTGGTCACAGAGTGTaGGCTTTGTGGGAGGGAAAG +
Preference number: 3 (lower is better)
Translates to: GMGLPPGVWWSQSVGFVGGGHRV*ALWEGK
Trigger: CTTTCCCTCCCACAAAGCCAACACTCTGTGACCACC...TCCCACAAAGCCAACACTCTGTGACCACCACACTCCAGGAGGCAGCCCCATCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269097.9
ENST00000585361.5
ENST00000588558.5
ENST00000590253.2
3UTR-3UTR CAA 90 bp GGGATGGGGCTGCCTCCTGGAGTGTGGTGGTCACAGAGTGTTGGCTTTGTGGGAAGAGAAGGCCCATCTTaGGGGCTAAGACCAGGTGGT +
Preference number: 3 (lower is better)
Translates to: GMGLPPGVWWSQSVGFVGREGPS*GLRPGG
Trigger: ACCACCTGGTCTTAGCCCCAAAGATGGGCCTTCTCT...TCCCACAAAGCCAACACTCTGTGACCACCACACTCCAGGAGGCAGCCCCATCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269097.9
ENST00000585361.5
ENST00000588558.5
ENST00000590253.2
3UTR-3UTR CAA 90 bp AAGGGCTTTATTGGGGCCGCCCTGGCTGCCCCTCACAGTGTTGCAAGAACCCGCGTCTTGCTGTTGCCTTaGCTCTTTGGGGGCTTGAGA +
Preference number: 3 (lower is better)
Translates to: KGFIGAALAAPHSVARTRVLLLP*LFGGLR
Trigger: TCTCAAGCCCCCAAAGAGCAAAGGCAACAGCAAGAC...GCGGGTTCTTGCAACACTGTGAGGGGCAGCCAGGGCGGCCCCAATAAAGCCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269097.9
ENST00000590253.2
3UTR-3UTR CAA 90 bp AGGGCTTTATTGGGGCCGCCCTGGCTGCCCCTCACAGTGTTGCAAGAACCCGCTGTCTTGCTGTTGCCTTaGCTCTTTGGGGGCTTGAGA +
Preference number: 3 (lower is better)
Translates to: RALLGPPWLPLTVLQEPAVLLLP*LFGGLR
Trigger: TCTCAAGCCCCCAAAGAGCAAAGGCAACAGCAAGAC...AGCGGGTTCTTGCAACACTGTGAGGGGCAGCCAGGGCGGCCCCAATAAAGCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269097.9
ENST00000590253.2
3UTR-3UTR CAA 90 bp CTGCCTCCTGGAGTGTGGTGGTCACAGAGTGTTGGCTTTGTGGGAGGGAAAGGATATTCAAGGGCTTTATaGGGGCCGCCCTGGCTGCCC +
Preference number: 3 (lower is better)
Translates to: LPPGVWWSQSVGFVGGKGYSRAL*GPPWLP
Trigger: GGGCAGCCAGGGCGGCCCCAATAAAGCCCTTGAATA...TCCTTTCCCTCCCACAAAGCCAACACTCTGTGACCACCACACTCCAGGAGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269097.9
ENST00000590253.2
3UTR-3UTR CAA 90 bp GAGTGTGGTGGTCACAGAGTGTTGGCTTTGTGGGAGGGAAAGGAAAGGGAGGCACCGCTGGTCTTGCTGTaGCCTTTGCTCTTTGGGGGC +
Preference number: 3 (lower is better)
Translates to: ECGGHRVLALWEGKEREAPLVLL*PLLFGG
Trigger: GCCCCCAAAGAGCAAAGGCAACAGCAAGACCAGCGG...TGCCTCCCTTTCCTTTCCCTCCCACAAAGCCAACACTCTGTGACCACCACACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269097.9
ENST00000585361.5
ENST00000588558.5
ENST00000590253.2
3UTR-3UTR CAA 90 bp CTGCCTCCTGGAGTGTGGTGGTCACAGAGTGTTGGCTTTGTGGGAGGGAAAGGAGGTGGTCACAGAGTGTaGGCTTTGTGGGAGGGAAAG +
Preference number: 3 (lower is better)
Translates to: LPPGVWWSQSVGFVGGKGGGHRV*ALWEGK
Trigger: CTTTCCCTCCCACAAAGCCAACACTCTGTGACCACC...TCCTTTCCCTCCCACAAAGCCAACACTCTGTGACCACCACACTCCAGGAGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269097.9
ENST00000585361.5
ENST00000588558.5
ENST00000590253.2
3UTR GCA 72 bp CAAAGTATTCAAGGGCTTTATTGGGGCCGCCCTGGCTaGCCCTCACAGTGTTGCAAGAACCCGCTGGTCTTG +
Preference number: 3 (lower is better)
Translates to: QSIQGLYWGRPG*PSQCCKNPLVL
Trigger: CAAGACCAGCGGGTTCTTGCAACACTGTGAGGGGCAGCCAGGGCGGCCCCAATAAAGCCCTTGAATACTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269097.9
ENST00000590253.2
3UTR TCA 72 bp GGCCAGCCAGCACCTGGTGAGGGAAATGTGCTAAGATaGAGATTCGCGACAAGCCAACCGCCAAAAGGAAGG +
Preference number: 3 (lower is better)
Translates to: GQPAPGEGNVLR*RFATSQPPKGR
Trigger: CCTTCCTTTTGGCGGTTGGCTTGTCGCGAATCTTCATCTTAGCACATTTCCCTCACCAGGTGCTGGCTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585361.5
ENST00000588558.5
3UTR GCA 72 bp TGCCGTTGGGCATGGTCCAGGGACCACACCTTAATCTaGAAGGTGTCTCTGTCCTTAGCAGCTACCGTGATG +
Preference number: 3 (lower is better)
Translates to: CRWAWSRDHTLI*KVSLSLAATVM
Trigger: CATCACGGTAGCTGCTAAGGACAGAGACACCTTGCAGATTAAGGTGTGGTCCCTGGACCATGCCCAACGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588558.5
ENST00000593115.1
3UTR TCA 72 bp AGGACAGCGCCAGTTATTAGGCCAGCCAGCACCTGGTaGGGGAAATGTGCTAAGATGAAGATTCGCGACAAG +
Preference number: 3 (lower is better)
Translates to: RTAPVIRPASTW*GKCAKMKIRDK
Trigger: CTTGTCGCGAATCTTCATCTTAGCACATTTCCCTCACCAGGTGCTGGCTGGCCTAATAACTGGCGCTGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585361.5
ENST00000588558.5
CDS-3UTR GCA 90 bp CCCGACGCACCTGGGCATAGCAGGGAGAGTGCAAGGCAATGCCCAGGCCCAGGGGCCCAGGACAGCGCCTaGGGGCCCGAGTGGCCACCT +
Preference number: 4 (lower is better)
Translates to: PDAPGHSRESARQCPGPGAQDSA*GPEWPP
Trigger: AGGTGGCCACTCGGGCCCGCAGGCGCTGTCCTGGGC...CCCTGGGCCTGGGCATTGCCTTGCACTCTCCCTGCTATGCCCAGGTGCGTCGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590253.2
CDS-3UTR GCA 90 bp GGCTGCGGGCCCGAGTGGCCACCTGCGAAGACAGGGCCGTCATTATGGGCCAGAGCAGTCCCCCGCTCCTaGAAGACCGGCCTCCAGCCG +
Preference number: 4 (lower is better)
Translates to: GCGPEWPPAKTGPSLWARAVPRS*KTGLQP
Trigger: CGGCTGGAGGCCGGTCTTGCAGGAGCGGGGGACTGC...TCTGGCCCATAATGACGGCCCTGTCTTCGCAGGTGGCCACTCGGGCCCGCAGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000585361.5
ENST00000588558.5
CDS-3UTR CCA 90 bp CATGCTTACATGACTCAGGGCCCTCGGGGGTGGGGACCAGGATGCCGGAGGGCTCAGGGCCCTCGGGGGTaGGGACCAGGATGCCGGAGG +
Preference number: 4 (lower is better)
Translates to: HAYMTQGPRGWGPGCRRAQGPRG*GPGCRR
Trigger: CCTCCGGCATCCTGGTCCCCACCCCCGAGGGCCCTG...AGCCCTCCGGCATCCTGGTCCCCACCCCCGAGGGCCCTGAGTCATGTAAGCATG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000593115.1
CDS-3UTR GCA 90 bp GCCGCCCTGGCTGCCCCTCACAGTGTTGCAAGAACCCGCTGGTCTTGCTGTTGCCCATGGCGGCCCAGCTaGCGACCAGGCCCCGGCTTG +
Preference number: 4 (lower is better)
Translates to: AALAAPHSVARTRWSCCCPWRPS*RPGPGL
Trigger: CAAGCCGGGGCCTGGTCGGCAGCTGGGCCGCCATGG...GCAACAGCAAGACCAGCGGGTTCTTGCAACACTGTGAGGGGCAGCCAGGGCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269097.9
CDS-3UTR GCA 90 bp GTGGATGGGCGGTGCTTCCTGGGCACTGAACATGTGCACTGCCCAGGGCACGAGCCATGGCGGCCCAGCTaGCGACCAGGCCCCGGCTTG +
Preference number: 4 (lower is better)
Translates to: VDGRCFLGTEHVHCPGHEPWRPS*RPGPGL
Trigger: CAAGCCGGGGCCTGGTCGGCAGCTGGGCCGCCATGG...CTCGTGCCCTGGGCAGTGCACATGTTCAGTGCCCAGGAAGCACCGCCCATCCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585361.5
ENST00000588558.5
CDS-3UTR GCA 90 bp TGGATGGGCGGTGCTTCCTGGGCACTGAACATGTGCACTGCCCAGGGCACGAGGCCATGGCGGCCCAGCTaGCGACCAGGCCCCGGCTTG +
Preference number: 4 (lower is better)
Translates to: WMGGASWALNMCTAQGTRPWRPS*RPGPGL
Trigger: CAAGCCGGGGCCTGGTCGGCAGCTGGGCCGCCATGG...CCTCGTGCCCTGGGCAGTGCACATGTTCAGTGCCCAGGAAGCACCGCCCATCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585361.5
ENST00000588558.5
CDS-3UTR CCA 90 bp CAGCGGCTGCGGGCCCGAGTGGCCACCTGCGAAGACAGGGCCGTCATTATGGGCGGGGCTGGAAGGGGATaGGGCTGCCTCCTGGAGTGT +
Preference number: 4 (lower is better)
Translates to: QRLRARVATCEDRAVIMGGAGRG*GCLLEC
Trigger: ACACTCCAGGAGGCAGCCCCATCCCCTTCCAGCCCC...GCCCATAATGACGGCCCTGTCTTCGCAGGTGGCCACTCGGGCCCGCAGCCGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585361.5
ENST00000588558.5
CDS-3UTR GCA 90 bp CCGACGCACCTGGGCATAGCAGGGAGAGTGCAAGGCAATGCCCAGGCCCAGGGCGACCAGGCCCCGGCTTaGTCCAGGGCGGAAACCAGA +
Preference number: 4 (lower is better)
Translates to: PTHLGIAGRVQGNAQAQGDQAPA*SRAETR
Trigger: TCTGGTTTCCGCCCTGGAGCAAGCCGGGGCCTGGTC...GCCCTGGGCCTGGGCATTGCCTTGCACTCTCCCTGCTATGCCCAGGTGCGTCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585361.5
ENST00000588558.5
CDS-3UTR GCA 90 bp CATGCTTACATGACTCAGGGCCCTCGGGGGTGGGGACCAGGATGCCGGAGGGCTTCCAGAGCACCGCGATaGCCACACGGCGGGAGGCGT +
Preference number: 4 (lower is better)
Translates to: HAYMTQGPRGWGPGCRRASRAPR*PHGGRR
Trigger: ACGCCTCCCGCCGTGTGGGCATCGCGGTGCTCTGGA...AGCCCTCCGGCATCCTGGTCCCCACCCCCGAGGGCCCTGAGTCATGTAAGCATG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593115.1
CDS-3UTR GCA 90 bp AGCCAGGCTAGGCATCACCCTTACCCAGCGGCTGCGGGCCCGAGTGGCCACCTGGGAAGGGGATGGGGCTaGCTCCTGGAGTGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: SQARHHPYPAAAGPSGHLGRGWG*LLECGG
Trigger: ACCACCACACTCCAGGAGGCAGCCCCATCCCCTTCC...CAGGTGGCCACTCGGGCCCGCAGCCGCTGGGTAAGGGTGATGCCTAGCCTGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585361.5
ENST00000588558.5
CDS-3UTR CCA 90 bp GCTTTATTGGGGCCGCCCTGGCTGCCCCTCACAGTGTTGCAAGAACCCGCTGGTTGCCCGCGCCCAGCGTaGACTCCATGGCGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: ALLGPPWLPLTVLQEPAGCPRPA*TPWRPS
Trigger: GCTGGGCCGCCATGGAGTCCACGCTGGGCGCGGGCA...ACCAGCGGGTTCTTGCAACACTGTGAGGGGCAGCCAGGGCGGCCCCAATAAAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269097.9
CDS-3UTR GCA 90 bp CTTTATTGGGGCCGCCCTGGCTGCCCCTCACAGTGTTGCAAGAACCCGCTGGTCGCAGTCCCCCGCTCCTaGAAGACCGGCCTCCAGCCG +
Preference number: 4 (lower is better)
Translates to: LYWGRPGCPSQCCKNPLVAVPRS*KTGLQP
Trigger: CGGCTGGAGGCCGGTCTTGCAGGAGCGGGGGACTGC...GACCAGCGGGTTCTTGCAACACTGTGAGGGGCAGCCAGGGCGGCCCCAATAAAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000269097.9
CDS-3UTR GCA 90 bp GCTGCGGGCCCGAGTGGCCACCTGCGAAGACAGGGCCGTCATTATGGGCCAGAGGCCCGAGTGGCCACCTaGGAAGACAGGGCCGTCATT +
Preference number: 4 (lower is better)
Translates to: AAGPSGHLRRQGRHYGPEARVAT*EDRAVI
Trigger: AATGACGGCCCTGTCTTCGCAGGTGGCCACTCGGGC...CTCTGGCCCATAATGACGGCCCTGTCTTCGCAGGTGGCCACTCGGGCCCGCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585361.5
ENST00000588558.5
CDS-3UTR GCA 90 bp GACGCACCTGGGCATAGCAGGGAGAGTGCAAGGCAATGCCCAGGCCCAGGGCAGGAGAGTGCAAGGCAATaGCCAGGCCCAGGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: DAPGHSRESARQCPGPGQESARQ*PGPGQP
Trigger: GGGCTGCCCTGGGCCTGGGCATTGCCTTGCACTCTC...CTGCCCTGGGCCTGGGCATTGCCTTGCACTCTCCCTGCTATGCCCAGGTGCGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000585361.5
ENST00000588558.5
ENST00000590253.2
CDS-3UTR CCA 90 bp AGGGCTTTATTGGGGCCGCCCTGGCTGCCCCTCACAGTGTTGCAAGAACCCGCTGCCTGCGGGCCCGAGTaGCCACCTGCGAAGACAGGG +
Preference number: 4 (lower is better)
Translates to: RALLGPPWLPLTVLQEPAACGPE*PPAKTG
Trigger: CCCTGTCTTCGCAGGTGGCCACTCGGGCCCGCAGGC...AGCGGGTTCTTGCAACACTGTGAGGGGCAGCCAGGGCGGCCCCAATAAAGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590253.2
CDS-3UTR TCA 90 bp GGGCAGCCCCTGAGTCACGGCTCAGGGAGGCAAAGGGCCGGCTATCCACGTGTAGAAGAGGGGAACTGGTaGACCTGGGCTGGAGCCTGG +
Preference number: 4 (lower is better)
Translates to: GQPLSHGSGRQRAGYPRVEEGNW*TWAGAW
Trigger: CCAGGCTCCAGCCCAGGTTCACCAGTTCCCCTCTTC...TACACGTGGATAGCCGGCCCTTTGCCTCCCTGAGCCGTGACTCAGGGGCTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585361.5
ENST00000588558.5
CDS-3UTR TCA 90 bp GCTGCGGGCCCGAGTGGCCACCTGCGAAGACAGGGCCGTCATTATGGGCCAGAGGTGCTTCCTGGGCACTaGACATGTGCACTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: AAGPSGHLRRQGRHYGPEVLPGH*TCALPR
Trigger: CCTGGGCAGTGCACATGTTCAGTGCCCAGGAAGCAC...CTCTGGCCCATAATGACGGCCCTGTCTTCGCAGGTGGCCACTCGGGCCCGCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585361.5
ENST00000588558.5
CDS-3UTR TCA 90 bp CCGACGCACCTGGGCATAGCAGGGAGAGTGCAAGGCAATGCCCAGGCCCAGGGCGTGCTTCCTGGGCACTaGACATGTGCACTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: PTHLGIAGRVQGNAQAQGVLPGH*TCALPR
Trigger: CCTGGGCAGTGCACATGTTCAGTGCCCAGGAAGCAC...GCCCTGGGCCTGGGCATTGCCTTGCACTCTCCCTGCTATGCCCAGGTGCGTCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000585361.5
ENST00000588558.5
ENST00000590253.2
CDS-3UTR GCA 90 bp ATTGGGGCCGCCCTGGCTGCCCCTCACAGTGTTGCAAGAACCCGCTGGTCTTGCGACCAGGCCCCGGCTTaGTCCAGGGCGGAAACCAGA +
Preference number: 4 (lower is better)
Translates to: IGAALAAPHSVARTRWSCDQAPA*SRAETR
Trigger: TCTGGTTTCCGCCCTGGAGCAAGCCGGGGCCTGGTC...GCAAGACCAGCGGGTTCTTGCAACACTGTGAGGGGCAGCCAGGGCGGCCCCAAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000269097.9
CDS-3UTR GCA 90 bp CCCGACGCACCTGGGCATAGCAGGGAGAGTGCAAGGCAATGCCCAGGCCCAGGGGCCATTTCCCAGCTGTaGCCGACGCACCTGGGCATA +
Preference number: 4 (lower is better)
Translates to: PDAPGHSRESARQCPGPGAISQL*PTHLGI
Trigger: TATGCCCAGGTGCGTCGGGCACAGCTGGGAAATGGC...CCCTGGGCCTGGGCATTGCCTTGCACTCTCCCTGCTATGCCCAGGTGCGTCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000585361.5
ENST00000588558.5
ENST00000590253.2
CDS-3UTR GCA 90 bp GGGCAGCCCCTGAGTCACGGCTCAGGGAGGCAAAGGGCCGGCTATCCACGTGTAGGAAGGGGATGGGGCTaGCTCCTGGAGTGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: GQPLSHGSGRQRAGYPRVGRGWG*LLECGG
Trigger: ACCACCACACTCCAGGAGGCAGCCCCATCCCCTTCC...TACACGTGGATAGCCGGCCCTTTGCCTCCCTGAGCCGTGACTCAGGGGCTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000585361.5
ENST00000588558.5
ENST00000590253.2
CDS-3UTR CCA 90 bp TTTATTGGGGCCGCCCTGGCTGCCCCTCACAGTGTTGCAAGAACCCGCTGGTCTGGCTGCGGGCCCGAGTaGCCACCTGCGAAGACAGGG +
Preference number: 4 (lower is better)
Translates to: FIGAALAAPHSVARTRWSGCGPE*PPAKTG
Trigger: CCCTGTCTTCGCAGGTGGCCACTCGGGCCCGCAGCC...AGACCAGCGGGTTCTTGCAACACTGTGAGGGGCAGCCAGGGCGGCCCCAATAAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269097.9
CDS-3UTR TCA 90 bp TTGGGGCCGCCCTGGCTGCCCCTCACAGTGTTGCAAGAACCCGCTGGTCTTGCTGCAGCGTCGACCCTCTaGTCTCCAAAGCCCACCCCT +
Preference number: 4 (lower is better)
Translates to: LGPPWLPLTVLQEPAGLAAASTL*SPKPTP
Trigger: AGGGGTGGGCTTTGGAGATCAGAGGGTCGACGCTGC...AGCAAGACCAGCGGGTTCTTGCAACACTGTGAGGGGCAGCCAGGGCGGCCCCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000269097.9
CDS-3UTR TCA 90 bp ATTGGGGCCGCCCTGGCTGCCCCTCACAGTGTTGCAAGAACCCGCTGGTCTTGCGAAGAGGGGAACTGGTaGACCTGGGCTGGAGCCTGG +
Preference number: 4 (lower is better)
Translates to: IGAALAAPHSVARTRWSCEEGNW*TWAGAW
Trigger: CCAGGCTCCAGCCCAGGTTCACCAGTTCCCCTCTTC...GCAAGACCAGCGGGTTCTTGCAACACTGTGAGGGGCAGCCAGGGCGGCCCCAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000269097.9
CDS-3UTR TCA 90 bp GTCACGGCTCAGGGAGGCAAAGGGCCGGCTATCCACGTGTATCCACTCAGGCCGGGCTGGTGCCTAGCATaGGGGCCAGTGCAGTCAACC +
Preference number: 4 (lower is better)
Translates to: VTAQGGKGPAIHVYPLRPGWCLA*GPVQST
Trigger: GGTTGACTGCACTGGCCCTCATGCTAGGCACCAGCC...CGGCCTGAGTGGATACACGTGGATAGCCGGCCCTTTGCCTCCCTGAGCCGTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000585361.5
ENST00000588558.5
ENST00000590253.2
CDS-3UTR GCA 90 bp GGATGGGGCTGCCTCCTGGAGTGTGGTGGTCACAGAGTGTTGGCTTTGTGGGAGTCCAGAGCACCGCGATaGCCACACGGCGGGAGGCGT +
Preference number: 4 (lower is better)
Translates to: GWGCLLECGGHRVLALWESRAPR*PHGGRR
Trigger: ACGCCTCCCGCCGTGTGGGCATCGCGGTGCTCTGGA...CTCCCACAAAGCCAACACTCTGTGACCACCACACTCCAGGAGGCAGCCCCATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269097.9
ENST00000585361.5
ENST00000588558.5
CDS-3UTR GCA 90 bp CAGCGGCTGCGGGCCCGAGTGGCCACCTGCGAAGACAGGGCCGTCATTATGGGCAGAGTGGATGGGCGGTaGTTCCTGGGCACTGAACAT +
Preference number: 4 (lower is better)
Translates to: QRLRARVATCEDRAVIMGRVDGR*FLGTEH
Trigger: ATGTTCAGTGCCCAGGAAGCACCGCCCATCCACTCT...GCCCATAATGACGGCCCTGTCTTCGCAGGTGGCCACTCGGGCCCGCAGCCGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585361.5
ENST00000588558.5
CDS-3UTR TCA 90 bp GCTGCGGGCCCGAGTGGCCACCTGCGAAGACAGGGCCGTCATTATGGGCCAGAGCCAGCCAGCACCTGGTaGGGGAAATGTGCTAAGATG +
Preference number: 4 (lower is better)
Translates to: AAGPSGHLRRQGRHYGPEPASTW*GKCAKM
Trigger: CATCTTAGCACATTTCCCTCACCAGGTGCTGGCTGG...CTCTGGCCCATAATGACGGCCCTGTCTTCGCAGGTGGCCACTCGGGCCCGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585361.5
ENST00000588558.5
CDS-3UTR GCA 90 bp AGAAGAGGGGAACTGGTGAACCTGGGCTGGAGCCTGGCTGTAGTAACCAGACTCGCAGTCCCCCGCTCCTaGAAGACCGGCCTCCAGCCG +
Preference number: 4 (lower is better)
Translates to: RRGELVNLGWSLAVVTRLAVPRS*KTGLQP
Trigger: CGGCTGGAGGCCGGTCTTGCAGGAGCGGGGGACTGC...GAGTCTGGTTACTACAGCCAGGCTCCAGCCCAGGTTCACCAGTTCCCCTCTTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000585361.5
ENST00000588558.5
CDS-3UTR GCA 90 bp GGATGGGGCTGCCTCCTGGAGTGTGGTGGTCACAGAGTGTTGGCTTTGTGGGAGGACCAGGCCCCGGCTTaGTCCAGGGCGGAAACCAGA +
Preference number: 4 (lower is better)
Translates to: GWGCLLECGGHRVLALWEDQAPA*SRAETR
Trigger: TCTGGTTTCCGCCCTGGAGCAAGCCGGGGCCTGGTC...CTCCCACAAAGCCAACACTCTGTGACCACCACACTCCAGGAGGCAGCCCCATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269097.9
ENST00000585361.5
ENST00000588558.5
CDS-3UTR GCA 90 bp GCTACCGTGATGCCCAGCACAAAGCATGCTTACATGACTCAGGGCCCTCGGGGGGACCAGGCCCCGGCTTaGTCCAGGGCGGAAACCAGA +
Preference number: 4 (lower is better)
Translates to: ATVMPSTKHAYMTQGPRGDQAPA*SRAETR
Trigger: TCTGGTTTCCGCCCTGGAGCAAGCCGGGGCCTGGTC...CCCCCGAGGGCCCTGAGTCATGTAAGCATGCTTTGTGCTGGGCATCACGGTAGC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000593115.1
CDS-3UTR GCA 90 bp GCCGTCATTATGGGCCAGAGGGCTGCTCCTGTGATCATGCAGTGTCCAGAAGGGTCCAGAGCACCGCGATaGCCACACGGCGGGAGGCGT +
Preference number: 4 (lower is better)
Translates to: AVIMGQRAAPVIMQCPEGSRAPR*PHGGRR
Trigger: ACGCCTCCCGCCGTGTGGGCATCGCGGTGCTCTGGA...CCCTTCTGGACACTGCATGATCACAGGAGCAGCCCTCTGGCCCATAATGACGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585361.5
ENST00000588558.5
CDS-3UTR GCA 90 bp CTTTATTGGGGCCGCCCTGGCTGCCCCTCACAGTGTTGCAAGAACCCGCTGGTCGCCCGAGTGGCCACCTaGGAAGACAGGGCCGTCATT +
Preference number: 4 (lower is better)
Translates to: LYWGRPGCPSQCCKNPLVARVAT*EDRAVI
Trigger: AATGACGGCCCTGTCTTCGCAGGTGGCCACTCGGGC...GACCAGCGGGTTCTTGCAACACTGTGAGGGGCAGCCAGGGCGGCCCCAATAAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269097.9
CDS-3UTR GCA 90 bp GGATGGGGCTGCCTCCTGGAGTGTGGTGGTCACAGAGTGTTGGCTTTGTGGGAGGAGAGTGCAAGGCAATaGCCAGGCCCAGGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: GWGCLLECGGHRVLALWEESARQ*PGPGQP
Trigger: GGGCTGCCCTGGGCCTGGGCATTGCCTTGCACTCTC...CTCCCACAAAGCCAACACTCTGTGACCACCACACTCCAGGAGGCAGCCCCATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269097.9
ENST00000585361.5
ENST00000588558.5
ENST00000590253.2
CDS-3UTR GCA 90 bp AGGGCTTTATTGGGGCCGCCCTGGCTGCCCCTCACAGTGTTGCAAGAACCCGCTGGAAGGGGATGGGGCTaGCTCCTGGAGTGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: RALLGPPWLPLTVLQEPAGRGWG*LLECGG
Trigger: ACCACCACACTCCAGGAGGCAGCCCCATCCCCTTCC...AGCGGGTTCTTGCAACACTGTGAGGGGCAGCCAGGGCGGCCCCAATAAAGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000269097.9
ENST00000590253.2
CDS-3UTR CCA 90 bp GCCGCCCTGGCTGCCCCTCACAGTGTTGCAAGAACCCGCTGGTCTTGCTGTTGCTCCAGCCAGGCTAGCTaGTTCTGTAGCGCCTCGGCT +
Preference number: 4 (lower is better)
Translates to: AALAAPHSVARTRWSCCCSSQAS*FCSASA
Trigger: AGCCGAGGCGCTACAGAACCAGCTAGCCTGGCTGGA...GCAACAGCAAGACCAGCGGGTTCTTGCAACACTGTGAGGGGCAGCCAGGGCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269097.9
CDS-3UTR CCA 90 bp GTCACGGCTCAGGGAGGCAAAGGGCCGGCTATCCACGTGTATCCACTCAGGCCGACAGGGCCGTCATTATaGGCCAGAGGGCTGCTCCTG +
Preference number: 4 (lower is better)
Translates to: VTAQGGKGPAIHVYPLRPTGPSL*ARGLLL
Trigger: CAGGAGCAGCCCTCTGGCCCATAATGACGGCCCTGT...CGGCCTGAGTGGATACACGTGGATAGCCGGCCCTTTGCCTCCCTGAGCCGTGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585361.5
ENST00000588558.5
CDS-3UTR CCA 90 bp AGAAGAGGGGAACTGGTGAACCTGGGCTGGAGCCTGGCTGTAGTAACCAGACTCGGCTGCGGGCCCGAGTaGCCACCTGCGAAGACAGGG +
Preference number: 4 (lower is better)
Translates to: RRGELVNLGWSLAVVTRLGCGPE*PPAKTG
Trigger: CCCTGTCTTCGCAGGTGGCCACTCGGGCCCGCAGCC...GAGTCTGGTTACTACAGCCAGGCTCCAGCCCAGGTTCACCAGTTCCCCTCTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585361.5
ENST00000588558.5
CDS-3UTR CCA 90 bp TTTATTGGGGCCGCCCTGGCTGCCCCTCACAGTGTTGCAAGAACCCGCTGGTCTGGGGCTGGAAGGGGATaGGGCTGCCTCCTGGAGTGT +
Preference number: 4 (lower is better)
Translates to: FIGAALAAPHSVARTRWSGAGRG*GCLLEC
Trigger: ACACTCCAGGAGGCAGCCCCATCCCCTTCCAGCCCC...AGACCAGCGGGTTCTTGCAACACTGTGAGGGGCAGCCAGGGCGGCCCCAATAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000269097.9
ENST00000590253.2
CDS-3UTR CCA 90 bp CGACAAGCCAACCGCCAAAAGGAAGGTGCAATAAGCCAGGCTAGGCATCACCCTCAGGGCCCTCGGGGGTaGGGACCAGGATGCCGGAGG +
Preference number: 4 (lower is better)
Translates to: RQANRQKEGAISQARHHPQGPRG*GPGCRR
Trigger: CCTCCGGCATCCTGGTCCCCACCCCCGAGGGCCCTG...AGGGTGATGCCTAGCCTGGCTTATTGCACCTTCCTTTTGGCGGTTGGCTTGTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585361.5
CDS-3UTR TCA 90 bp GGATGGGGCTGCCTCCTGGAGTGTGGTGGTCACAGAGTGTTGGCTTTGTGGGAGGAAGAGGGGAACTGGTaGACCTGGGCTGGAGCCTGG +
Preference number: 4 (lower is better)
Translates to: GWGCLLECGGHRVLALWEEEGNW*TWAGAW
Trigger: CCAGGCTCCAGCCCAGGTTCACCAGTTCCCCTCTTC...CTCCCACAAAGCCAACACTCTGTGACCACCACACTCCAGGAGGCAGCCCCATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269097.9
ENST00000585361.5
ENST00000588558.5
CDS-3UTR TCA 90 bp GGGATGGGGCTGCCTCCTGGAGTGTGGTGGTCACAGAGTGTTGGCTTTGTGGGAGGCTGGTGCCTAGCATaGGGGCCAGTGCAGTCAACC +
Preference number: 4 (lower is better)
Translates to: GMGLPPGVWWSQSVGFVGGWCLA*GPVQST
Trigger: GGTTGACTGCACTGGCCCTCATGCTAGGCACCAGCC...TCCCACAAAGCCAACACTCTGTGACCACCACACTCCAGGAGGCAGCCCCATCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269097.9
ENST00000585361.5
ENST00000588558.5
ENST00000590253.2
CDS-3UTR GCA 90 bp TGGTCCAGGGACCACACCTTAATCTGCAAGGTGTCTCTGTCCTTAGCAGCTACCCCATGGCGGCCCAGCTaGCGACCAGGCCCCGGCTTG +
Preference number: 4 (lower is better)
Translates to: WSRDHTLICKVSLSLAATPWRPS*RPGPGL
Trigger: CAAGCCGGGGCCTGGTCGGCAGCTGGGCCGCCATGG...GGTAGCTGCTAAGGACAGAGACACCTTGCAGATTAAGGTGTGGTCCCTGGACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588558.5
ENST00000593115.1
CDS-3UTR GCA 90 bp AGGGGAACTGGTGAACCTGGGCTGGAGCCTGGCTGTAGTAACCAGACTCATGGATCCAGAGCACCGCGATaGCCACACGGCGGGAGGCGT +
Preference number: 4 (lower is better)
Translates to: RGTGEPGLEPGCSNQTHGSRAPR*PHGGRR
Trigger: ACGCCTCCCGCCGTGTGGGCATCGCGGTGCTCTGGA...TCCATGAGTCTGGTTACTACAGCCAGGCTCCAGCCCAGGTTCACCAGTTCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585361.5
ENST00000588558.5
CDS-3UTR GCA 90 bp TGGAGTGTGGTGGTCACAGAGTGTTGGCTTTGTGGGAGGGAAAGGAAAGGGAGGCCCTTACCCAGCGGCTaGGGGCCCGAGTGGCCACCT +
Preference number: 4 (lower is better)
Translates to: WSVVVTECWLCGRERKGRPLPSG*GPEWPP
Trigger: AGGTGGCCACTCGGGCCCGCAGCCGCTGGGTAAGGG...CCTCCCTTTCCTTTCCCTCCCACAAAGCCAACACTCTGTGACCACCACACTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269097.9
ENST00000585361.5
ENST00000588558.5
CDS-3UTR GCA 90 bp TGGGGGCTTGAGAGGAAAGGCAGAGGGAGGACCAACTTATCTGGGAGAGAGAAGCCCTTACCCAGCGGCTaGGGGCCCGAGTGGCCACCT +
Preference number: 4 (lower is better)
Translates to: WGLERKGRGRTNLSGREKPLPSG*GPEWPP
Trigger: AGGTGGCCACTCGGGCCCGCAGCCGCTGGGTAAGGG...CTTCTCTCTCCCAGATAAGTTGGTCCTCCCTCTGCCTTTCCTCTCAAGCCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269097.9
ENST00000585361.5
ENST00000588558.5
CDS-3UTR GCA 90 bp GGGCAGCCCCTGAGTCACGGCTCAGGGAGGCAAAGGGCCGGCTATCCACGTGTAAGAGTGGATGGGCGGTaGTTCCTGGGCACTGAACAT +
Preference number: 4 (lower is better)
Translates to: GQPLSHGSGRQRAGYPRVRVDGR*FLGTEH
Trigger: ATGTTCAGTGCCCAGGAAGCACCGCCCATCCACTCT...TACACGTGGATAGCCGGCCCTTTGCCTCCCTGAGCCGTGACTCAGGGGCTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000585361.5
ENST00000588558.5
ENST00000590253.2
CDS-3UTR CCA 90 bp GTGCTGCCTATGCCGTTGGGCATGGTCCAGGGACCACACCTTAATCTGCAAGGTCCAGCGTGGACTCCATaGCGGCCCAGCTGCCGACCA +
Preference number: 4 (lower is better)
Translates to: VLPMPLGMVQGPHLNLQGPAWTP*RPSCRP
Trigger: TGGTCGGCAGCTGGGCCGCCATGGAGTCCACGCTGG...ACCTTGCAGATTAAGGTGTGGTCCCTGGACCATGCCCAACGGCATAGGCAGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588558.5
ENST00000593115.1
CDS-3UTR CCA 90 bp CTTTATTGGGGCCGCCCTGGCTGCCCCTCACAGTGTTGCAAGAACCCGCTGGTCACAGGGCCGTCATTATaGGCCAGAGGGCTGCTCCTG +
Preference number: 4 (lower is better)
Translates to: LYWGRPGCPSQCCKNPLVTGPSL*ARGLLL
Trigger: CAGGAGCAGCCCTCTGGCCCATAATGACGGCCCTGT...GACCAGCGGGTTCTTGCAACACTGTGAGGGGCAGCCAGGGCGGCCCCAATAAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269097.9
CDS-3UTR CCA 90 bp GAGCCTGGCTGTAGTAACCAGACTCATGGACCCACCAAAAGGGCCTGTCTCCAAGGCTGCGGGCCCGAGTaGCCACCTGCGAAGACAGGG +
Preference number: 4 (lower is better)
Translates to: EPGCSNQTHGPTKRACLQGCGPE*PPAKTG
Trigger: CCCTGTCTTCGCAGGTGGCCACTCGGGCCCGCAGCC...TTGGAGACAGGCCCTTTTGGTGGGTCCATGAGTCTGGTTACTACAGCCAGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585361.5
ENST00000588558.5
CDS-3UTR CCA 90 bp GCTGTGCCCGACGCACCTGGGCATAGCAGGGAGAGTGCAAGGCAATGCCCAGGCAGGCAGGCTATCTTCTaGCCATTTCCCAGCTGTGCC +
Preference number: 4 (lower is better)
Translates to: AVPDAPGHSRESARQCPGRQAIF*PFPSCA
Trigger: GGCACAGCTGGGAAATGGCCAGAAGATAGCCTGCCT...GCCTGGGCATTGCCTTGCACTCTCCCTGCTATGCCCAGGTGCGTCGGGCACAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000585361.5
ENST00000588558.5
ENST00000590253.2
CDS-3UTR CCA 90 bp GGGCAGCCCCTGAGTCACGGCTCAGGGAGGCAAAGGGCCGGCTATCCACGTGTAGGGGCTAAGACCAGGTaGTGCGGAAGCAGATTTAGG +
Preference number: 4 (lower is better)
Translates to: GQPLSHGSGRQRAGYPRVGAKTR*CGSRFR
Trigger: CCTAAATCTGCTTCCGCACCACCTGGTCTTAGCCCC...TACACGTGGATAGCCGGCCCTTTGCCTCCCTGAGCCGTGACTCAGGGGCTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000585361.5
ENST00000588558.5
ENST00000590253.2
CDS-3UTR TCA 90 bp ATTGGGGCCGCCCTGGCTGCCCCTCACAGTGTTGCAAGAACCCGCTGGTCTTGCGATCGCCCAGAAAGGTaGTCCAGAGCCACACGTTCT +
Preference number: 4 (lower is better)
Translates to: IGAALAAPHSVARTRWSCDRPER*SRATRS
Trigger: AGAACGTGTGGCTCTGGATCACCTTTCTGGGCGATC...GCAAGACCAGCGGGTTCTTGCAACACTGTGAGGGGCAGCCAGGGCGGCCCCAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269097.9
CDS-3UTR TCA 90 bp CGGCTATCCACGTGTATCCACTCAGGCCGCTCACACCACTTGAAGGCTAGGCTGGGCTGGTGCCTAGCATaGGGGCCAGTGCAGTCAACC +
Preference number: 4 (lower is better)
Translates to: RLSTCIHSGRSHHLKARLGWCLA*GPVQST
Trigger: GGTTGACTGCACTGGCCCTCATGCTAGGCACCAGCC...CAGCCTAGCCTTCAAGTGGTGTGAGCGGCCTGAGTGGATACACGTGGATAGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585361.5
ENST00000588558.5
CDS-3UTR GCA 90 bp AGGGGAACTGGTGAACCTGGGCTGGAGCCTGGCTGTAGTAACCAGACTCATGGACCTCGGCTATCACGATaGCCGCGCCCAGCGTGGACT +
Preference number: 4 (lower is better)
Translates to: RGTGEPGLEPGCSNQTHGPRLSR*PRPAWT
Trigger: AGTCCACGCTGGGCGCGGGCATCGTGATAGCCGAGG...TCCATGAGTCTGGTTACTACAGCCAGGCTCCAGCCCAGGTTCACCAGTTCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585361.5
ENST00000588558.5
CDS-3UTR GCA 90 bp GATTCGCGACAAGCCAACCGCCAAAAGGAAGGTGCAATAAGCCAGGCTAGGCATCCCTTACCCAGCGGCTaGGGGCCCGAGTGGCCACCT +
Preference number: 4 (lower is better)
Translates to: DSRQANRQKEGAISQARHPLPSG*GPEWPP
Trigger: AGGTGGCCACTCGGGCCCGCAGCCGCTGGGTAAGGG...ATGCCTAGCCTGGCTTATTGCACCTTCCTTTTGGCGGTTGGCTTGTCGCGAATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585361.5
ENST00000588558.5
CDS-3UTR GCA 90 bp GGATGGGGCTGCCTCCTGGAGTGTGGTGGTCACAGAGTGTTGGCTTTGTGGGAGGCCATTTCCCAGCTGTaGCCGACGCACCTGGGCATA +
Preference number: 4 (lower is better)
Translates to: GWGCLLECGGHRVLALWEAISQL*PTHLGI
Trigger: TATGCCCAGGTGCGTCGGGCACAGCTGGGAAATGGC...CTCCCACAAAGCCAACACTCTGTGACCACCACACTCCAGGAGGCAGCCCCATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269097.9
ENST00000585361.5
ENST00000588558.5
ENST00000590253.2
CDS-3UTR GCA 90 bp CATTTCCCAGCTGTGCCCGACGCACCTGGGCATAGCAGGGAGAGTGCAAGGCAAGCCATTTCCCAGCTGTaGCCGACGCACCTGGGCATA +
Preference number: 4 (lower is better)
Translates to: HFPAVPDAPGHSRESARQAISQL*PTHLGI
Trigger: TATGCCCAGGTGCGTCGGGCACAGCTGGGAAATGGC...TTGCCTTGCACTCTCCCTGCTATGCCCAGGTGCGTCGGGCACAGCTGGGAAATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000585361.5
ENST00000588558.5
ENST00000590253.2
CDS-3UTR GCA 90 bp GGGATGGGGCTGCCTCCTGGAGTGTGGTGGTCACAGAGTGTTGGCTTTGTGGGAGCCATTTCCCAGCTGTaGCCGACGCACCTGGGCATA +
Preference number: 4 (lower is better)
Translates to: GMGLPPGVWWSQSVGFVGAISQL*PTHLGI
Trigger: TATGCCCAGGTGCGTCGGGCACAGCTGGGAAATGGC...TCCCACAAAGCCAACACTCTGTGACCACCACACTCCAGGAGGCAGCCCCATCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269097.9
ENST00000585361.5
ENST00000588558.5
ENST00000590253.2
CDS-3UTR GCA 90 bp CCGACGCACCTGGGCATAGCAGGGAGAGTGCAAGGCAATGCCCAGGCCCAGGGCAGAACCCGCTGGTCTTaGTGTTGCCTTTGCTCTTTG +
Preference number: 4 (lower is better)
Translates to: PTHLGIAGRVQGNAQAQGRTRWS*CCLCSL
Trigger: CAAAGAGCAAAGGCAACAGCAAGACCAGCGGGTTCT...GCCCTGGGCCTGGGCATTGCCTTGCACTCTCCCTGCTATGCCCAGGTGCGTCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000585361.5
ENST00000588558.5
ENST00000590253.2
CDS-3UTR GCA 90 bp GTGGATGGGCGGTGCTTCCTGGGCACTGAACATGTGCACTGCCCAGGGCACGAGTGCCCCTCACAGTGTTaGAAGAACCCGCTGGTCTTG +
Preference number: 4 (lower is better)
Translates to: VDGRCFLGTEHVHCPGHECPSQC*KNPLVL
Trigger: CAAGACCAGCGGGTTCTTGCAACACTGTGAGGGGCA...CTCGTGCCCTGGGCAGTGCACATGTTCAGTGCCCAGGAAGCACCGCCCATCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588558.5
ENST00000590253.2
CDS-3UTR GCA 90 bp GTCACGGCTCAGGGAGGCAAAGGGCCGGCTATCCACGTGTATCCACTCAGGCCGTGCCCCTCACAGTGTTaGAAGAACCCGCTGGTCTTG +
Preference number: 4 (lower is better)
Translates to: VTAQGGKGPAIHVYPLRPCPSQC*KNPLVL
Trigger: CAAGACCAGCGGGTTCTTGCAACACTGTGAGGGGCA...CGGCCTGAGTGGATACACGTGGATAGCCGGCCCTTTGCCTCCCTGAGCCGTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588558.5
ENST00000590253.2
CDS-3UTR GCA 90 bp AGTATTCAAGGGCTTTATTGGGGCCGCCCTGGCTGCCCCTCACAGTGTTGCAAGTGGGGCCGCCCTGGCTaGCCCTCACAGTGTTGCAAG +
Preference number: 4 (lower is better)
Translates to: SIQGLYWGRPGCPSQCCKWGRPG*PSQCCK
Trigger: CTTGCAACACTGTGAGGGGCAGCCAGGGCGGCCCCA...CTTGCAACACTGTGAGGGGCAGCCAGGGCGGCCCCAATAAAGCCCTTGAATACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269097.9
ENST00000590253.2
CDS-3UTR GCA 90 bp CGGCTATCCACGTGTATCCACTCAGGCCGCTCACACCACTTGAAGGCTAGGCTGGGGTGGGGACCAGGATaGCGGAGGGCTTCTCTGTCT +
Preference number: 4 (lower is better)
Translates to: RLSTCIHSGRSHHLKARLGWGPG*RRASLS
Trigger: AGACAGAGAAGCCCTCCGGCATCCTGGTCCCCACCC...CAGCCTAGCCTTCAAGTGGTGTGAGCGGCCTGAGTGGATACACGTGGATAGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585361.5
CDS-3UTR CCA 90 bp TATTCAAGGGCTTTATTGGGGCCGCCCTGGCTGCCCCTCACAGTGTTGCAAGAACCAGCGTGGACTCCATaGCGGCCCAGCTGCCGACCA +
Preference number: 4 (lower is better)
Translates to: YSRALLGPPWLPLTVLQEPAWTP*RPSCRP
Trigger: TGGTCGGCAGCTGGGCCGCCATGGAGTCCACGCTGG...TTCTTGCAACACTGTGAGGGGCAGCCAGGGCGGCCCCAATAAAGCCCTTGAATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269097.9
CDS-3UTR CCA 90 bp TCCTGGAGTGTGGTGGTCACAGAGTGTTGGCTTTGTGGGAGGGAAAGGAAAGGGCCAGCGTGGACTCCATaGCGGCCCAGCTGCCGACCA +
Preference number: 4 (lower is better)
Translates to: SWSVVVTECWLCGRERKGPAWTP*RPSCRP
Trigger: TGGTCGGCAGCTGGGCCGCCATGGAGTCCACGCTGG...CCCTTTCCTTTCCCTCCCACAAAGCCAACACTCTGTGACCACCACACTCCAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269097.9
ENST00000585361.5
ENST00000588558.5
CDS-3UTR CCA 90 bp CCCGAGTGGCCACCTGCGAAGACAGGGCCGTCATTATGGGCCAGAGGGCTGCTCTCCAGAAGGGCTGCCTaGACCAGTCTCACAAGAAGA +
Preference number: 4 (lower is better)
Translates to: PEWPPAKTGPSLWARGLLSRRAA*TSLTRR
Trigger: TCTTCTTGTGAGACTGGTCCAGGCAGCCCTTCTGGA...GAGCAGCCCTCTGGCCCATAATGACGGCCCTGTCTTCGCAGGTGGCCACTCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585361.5
ENST00000588558.5
CDS-3UTR CCA 90 bp GGCTATCTTCTGGCCATTTCCCAGCTGTGCCCGACGCACCTGGGCATAGCAGGGCTGCCTCCTGGAGTGTaGTGGTCACAGAGTGTTGGC +
Preference number: 4 (lower is better)
Translates to: GYLLAISQLCPTHLGIAGLPPGV*WSQSVG
Trigger: GCCAACACTCTGTGACCACCACACTCCAGGAGGCAG...CCCTGCTATGCCCAGGTGCGTCGGGCACAGCTGGGAAATGGCCAGAAGATAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000585361.5
ENST00000588558.5
ENST00000590253.2
CDS-3UTR CCA 90 bp TTGGGGCCGCCCTGGCTGCCCCTCACAGTGTTGCAAGAACCCGCTGGTCTTGCTGGGGCTAAGACCAGGTaGTGCGGAAGCAGATTTAGG +
Preference number: 4 (lower is better)
Translates to: LGPPWLPLTVLQEPAGLAGAKTR*CGSRFR
Trigger: CCTAAATCTGCTTCCGCACCACCTGGTCTTAGCCCC...AGCAAGACCAGCGGGTTCTTGCAACACTGTGAGGGGCAGCCAGGGCGGCCCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269097.9
ENST00000590253.2
CDS-3UTR TCA 90 bp GGTGAACCTGGGCTGGAGCCTGGCTGTAGTAACCAGACTCATGGACCCACCAAAGCAGCGTCGACCCTCTaGTCTCCAAAGCCCACCCCT +
Preference number: 4 (lower is better)
Translates to: GEPGLEPGCSNQTHGPTKAASTL*SPKPTP
Trigger: AGGGGTGGGCTTTGGAGATCAGAGGGTCGACGCTGC...TTTGGTGGGTCCATGAGTCTGGTTACTACAGCCAGGCTCCAGCCCAGGTTCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585361.5
ENST00000588558.5
CDS-3UTR TCA 90 bp AAGGGCTTTATTGGGGCCGCCCTGGCTGCCCCTCACAGTGTTGCAAGAACCCGCCCAGCCAGCACCTGGTaGGGGAAATGTGCTAAGATG +
Preference number: 4 (lower is better)
Translates to: KGFIGAALAAPHSVARTRPASTW*GKCAKM
Trigger: CATCTTAGCACATTTCCCTCACCAGGTGCTGGCTGG...GCGGGTTCTTGCAACACTGTGAGGGGCAGCCAGGGCGGCCCCAATAAAGCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000269097.9
CDS-3UTR GCA 90 bp TTTGATTCAGTAGCTCTGGCCCGGGGCCTGAGAGTCTGCGTTTTTAGCCAGTTTGCAGTCCCCCGCTCCTaGAAGACCGGCCTCCAGCCG +
Preference number: 4 (lower is better)
Translates to: FDSVALARGLRVCVFSQFAVPRS*KTGLQP
Trigger: CGGCTGGAGGCCGGTCTTGCAGGAGCGGGGGACTGC...AAACTGGCTAAAAACGCAGACTCTCAGGCCCCGGGCCAGAGCTACTGAATCAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000588558.5
ENST00000593115.1
CDS-3UTR GCA 90 bp TATTCAAGGGCTTTATTGGGGCCGCCCTGGCTGCCCCTCACAGTGTTGCAAGAACCTCGGCTATCACGATaGCCGCGCCCAGCGTGGACT +
Preference number: 4 (lower is better)
Translates to: YSRALLGPPWLPLTVLQEPRLSR*PRPAWT
Trigger: AGTCCACGCTGGGCGCGGGCATCGTGATAGCCGAGG...TTCTTGCAACACTGTGAGGGGCAGCCAGGGCGGCCCCAATAAAGCCCTTGAATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269097.9
CDS-3UTR GCA 90 bp GAGTGTGGTGGTCACAGAGTGTTGGCTTTGTGGGAGGGAAAGGAAAGGGAGGCAGAGAGTGCAAGGCAATaGCCAGGCCCAGGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: ECGGHRVLALWEGKEREAESARQ*PGPGQP
Trigger: GGGCTGCCCTGGGCCTGGGCATTGCCTTGCACTCTC...TGCCTCCCTTTCCTTTCCCTCCCACAAAGCCAACACTCTGTGACCACCACACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269097.9
ENST00000585361.5
ENST00000588558.5
ENST00000590253.2
CDS-3UTR GCA 90 bp AGTATTCAAGGGCTTTATTGGGGCCGCCCTGGCTGCCCCTCACAGTGTTGCAAGGGAAGGGGATGGGGCTaGCTCCTGGAGTGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: SIQGLYWGRPGCPSQCCKGRGWG*LLECGG
Trigger: ACCACCACACTCCAGGAGGCAGCCCCATCCCCTTCC...CTTGCAACACTGTGAGGGGCAGCCAGGGCGGCCCCAATAAAGCCCTTGAATACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000269097.9
ENST00000590253.2
CDS-3UTR GCA 90 bp GAGTGTGGTGGTCACAGAGTGTTGGCTTTGTGGGAGGGAAAGGAAAGGGAGGCATGGGGCCGCCCTGGCTaGCCCTCACAGTGTTGCAAG +
Preference number: 4 (lower is better)
Translates to: ECGGHRVLALWEGKEREAWGRPG*PSQCCK
Trigger: CTTGCAACACTGTGAGGGGCAGCCAGGGCGGCCCCA...TGCCTCCCTTTCCTTTCCCTCCCACAAAGCCAACACTCTGTGACCACCACACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269097.9
ENST00000590253.2
CDS-3UTR CCA 90 bp GTTTTTAGCCAGTTTTCAAGTGCTGCCTATGCCGTTGGGCATGGTCCAGGGACCCCAGCGTGGACTCCATaGCGGCCCAGCTGCCGACCA +
Preference number: 4 (lower is better)
Translates to: VFSQFSSAAYAVGHGPGTPAWTP*RPSCRP
Trigger: TGGTCGGCAGCTGGGCCGCCATGGAGTCCACGCTGG...GGTCCCTGGACCATGCCCAACGGCATAGGCAGCACTTGAAAACTGGCTAAAAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000588558.5
ENST00000593115.1
CDS-3UTR CCA 90 bp GGCTGCCTCCTGGAGTGTGGTGGTCACAGAGTGTTGGCTTTGTGGGAGGGAAAGTCCAGCCAGGCTAGCTaGTTCTGTAGCGCCTCGGCT +
Preference number: 4 (lower is better)
Translates to: GCLLECGGHRVLALWEGKSSQAS*FCSASA
Trigger: AGCCGAGGCGCTACAGAACCAGCTAGCCTGGCTGGA...CTTTCCCTCCCACAAAGCCAACACTCTGTGACCACCACACTCCAGGAGGCAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269097.9
ENST00000585361.5
ENST00000588558.5
CDS-3UTR CCA 90 bp TTGGGGCCGCCCTGGCTGCCCCTCACAGTGTTGCAAGAACCCGCTGGTCTTGCTTCCAGAAGGGCTGCCTaGACCAGTCTCACAAGAAGA +
Preference number: 4 (lower is better)
Translates to: LGPPWLPLTVLQEPAGLASRRAA*TSLTRR
Trigger: TCTTCTTGTGAGACTGGTCCAGGCAGCCCTTCTGGA...AGCAAGACCAGCGGGTTCTTGCAACACTGTGAGGGGCAGCCAGGGCGGCCCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269097.9
CDS-3UTR CCA 90 bp TGGATGGGCGGTGCTTCCTGGGCACTGAACATGTGCACTGCCCAGGGCACGAGGTCCAGAAGGGCTGCCTaGACCAGTCTCACAAGAAGA +
Preference number: 4 (lower is better)
Translates to: WMGGASWALNMCTAQGTRSRRAA*TSLTRR
Trigger: TCTTCTTGTGAGACTGGTCCAGGCAGCCCTTCTGGA...CCTCGTGCCCTGGGCAGTGCACATGTTCAGTGCCCAGGAAGCACCGCCCATCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585361.5
ENST00000588558.5
CDS-3UTR CCA 90 bp CGGCTATCCACGTGTATCCACTCAGGCCGCTCACACCACTTGAAGGCTAGGCTGGTCAGGAAGAGTGGATaGGCGGTGCTTCCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: RLSTCIHSGRSHHLKARLVRKSG*AVLPGH
Trigger: GTGCCCAGGAAGCACCGCCCATCCACTCTTCCTGAC...CAGCCTAGCCTTCAAGTGGTGTGAGCGGCCTGAGTGGATACACGTGGATAGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585361.5
ENST00000588558.5
CDS-3UTR CCA 90 bp TTGGGGCCGCCCTGGCTGCCCCTCACAGTGTTGCAAGAACCCGCTGGTCTTGCTGTGGTCACAGAGTGTTaGCTTTGTGGGAGGGAAAGG +
Preference number: 4 (lower is better)
Translates to: LGPPWLPLTVLQEPAGLAVVTEC*LCGRER
Trigger: CCTTTCCCTCCCACAAAGCCAACACTCTGTGACCAC...AGCAAGACCAGCGGGTTCTTGCAACACTGTGAGGGGCAGCCAGGGCGGCCCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269097.9
ENST00000590253.2
CDS-3UTR CCA 90 bp GCTGCCTCCTGGAGTGTGGTGGTCACAGAGTGTTGGCTTTGTGGGAGGGAAAGGGATGGGGCTGCCTCCTaGAGTGTGGTGGTCACAGAG +
Preference number: 4 (lower is better)
Translates to: AASWSVVVTECWLCGRERDGAAS*SVVVTE
Trigger: CTCTGTGACCACCACACTCCAGGAGGCAGCCCCATC...CCTTTCCCTCCCACAAAGCCAACACTCTGTGACCACCACACTCCAGGAGGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269097.9
ENST00000585361.5
ENST00000588558.5
ENST00000590253.2
CDS-3UTR CCA 90 bp TATCTTCTGGCCATTTCCCAGCTGTGCCCGACGCACCTGGGCATAGCAGGGAGAGATGGGGCTGCCTCCTaGAGTGTGGTGGTCACAGAG +
Preference number: 4 (lower is better)
Translates to: YLLAISQLCPTHLGIAGRDGAAS*SVVVTE
Trigger: CTCTGTGACCACCACACTCCAGGAGGCAGCCCCATC...TCTCCCTGCTATGCCCAGGTGCGTCGGGCACAGCTGGGAAATGGCCAGAAGATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000585361.5
ENST00000588558.5
ENST00000590253.2
CDS-3UTR CCA 90 bp TGGAGTGTGGTGGTCACAGAGTGTTGGCTTTGTGGGAGGGAAAGGAAAGGGAGGGGGGCTGGAAGGGGATaGGGCTGCCTCCTGGAGTGT +
Preference number: 4 (lower is better)
Translates to: WSVVVTECWLCGRERKGRGAGRG*GCLLEC
Trigger: ACACTCCAGGAGGCAGCCCCATCCCCTTCCAGCCCC...CCTCCCTTTCCTTTCCCTCCCACAAAGCCAACACTCTGTGACCACCACACTCCA
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000269097.9
ENST00000585361.5
ENST00000588558.5
ENST00000590253.2
CDS-3UTR CCA 90 bp GGCCAGCACAAGGCAGGCTATCTTCTGGCCATTTCCCAGCTGTGCCCGACGCACGGGGCTAAGACCAGGTaGTGCGGAAGCAGATTTAGG +
Preference number: 4 (lower is better)
Translates to: GQHKAGYLLAISQLCPTHGAKTR*CGSRFR
Trigger: CCTAAATCTGCTTCCGCACCACCTGGTCTTAGCCCC...GTGCGTCGGGCACAGCTGGGAAATGGCCAGAAGATAGCCTGCCTTGTGCTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000585361.5
ENST00000588558.5
ENST00000590253.2
CDS-3UTR CCA 90 bp TTGGGGCCGCCCTGGCTGCCCCTCACAGTGTTGCAAGAACCCGCTGGTCTTGCTGTTGCAAGAACCCGCTaGTCTTGCTGTTGCCTTTGC +
Preference number: 4 (lower is better)
Translates to: LGPPWLPLTVLQEPAGLAVARTR*SCCCLC
Trigger: GCAAAGGCAACAGCAAGACCAGCGGGTTCTTGCAAC...AGCAAGACCAGCGGGTTCTTGCAACACTGTGAGGGGCAGCCAGGGCGGCCCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269097.9
ENST00000590253.2
CDS-3UTR TCA 90 bp CCTGGAGTGTGGTGGTCACAGAGTGTTGGCTTTGTGGGAGGGAAAGGAAAGGGAGCAGCGTCGACCCTCTaGTCTCCAAAGCCCACCCCT +
Preference number: 4 (lower is better)
Translates to: PGVWWSQSVGFVGGKGKGAASTL*SPKPTP
Trigger: AGGGGTGGGCTTTGGAGATCAGAGGGTCGACGCTGC...TCCCTTTCCTTTCCCTCCCACAAAGCCAACACTCTGTGACCACCACACTCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269097.9
ENST00000585361.5
ENST00000588558.5
CDS-3UTR TCA 90 bp CAAGTGCTGCCTATGCCGTTGGGCATGGTCCAGGGACCACACCTTAATCTGCAAGCAGCGTCGACCCTCTaGTCTCCAAAGCCCACCCCT +
Preference number: 4 (lower is better)
Translates to: QVLPMPLGMVQGPHLNLQAASTL*SPKPTP
Trigger: AGGGGTGGGCTTTGGAGATCAGAGGGTCGACGCTGC...TTGCAGATTAAGGTGTGGTCCCTGGACCATGCCCAACGGCATAGGCAGCACTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588558.5
ENST00000593115.1
CDS-3UTR TCA 90 bp GGCTGCGGGCCCGAGTGGCCACCTGCGAAGACAGGGCCGTCATTATGGGCCAGAGGAAATGTGCTAAGATaGAGATTCGCGACAAGCCAA +
Preference number: 4 (lower is better)
Translates to: GCGPEWPPAKTGPSLWARGNVLR*RFATSQ
Trigger: TTGGCTTGTCGCGAATCTTCATCTTAGCACATTTCC...TCTGGCCCATAATGACGGCCCTGTCTTCGCAGGTGGCCACTCGGGCCCGCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585361.5
ENST00000588558.5
CDS-3UTR TCA 90 bp GAGTGTGGTGGTCACAGAGTGTTGGCTTTGTGGGAGGGAAAGGAAAGGGAGGCAGGCTGGTGCCTAGCATaGGGGCCAGTGCAGTCAACC +
Preference number: 4 (lower is better)
Translates to: ECGGHRVLALWEGKEREAGWCLA*GPVQST
Trigger: GGTTGACTGCACTGGCCCTCATGCTAGGCACCAGCC...TGCCTCCCTTTCCTTTCCCTCCCACAAAGCCAACACTCTGTGACCACCACACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269097.9
ENST00000585361.5
ENST00000588558.5
ENST00000590253.2
CDS-3UTR TCA 90 bp GCCAGCCCAGGACAGCGCCAGTTATTAGGCCAGCCAGCACCTGGTGAGGGAAATCCAAAAAGAAACACATaGCTCAGGGCCCTCGGGGGT +
Preference number: 4 (lower is better)
Translates to: ASPGQRQLLGQPAPGEGNPKRNT*LRALGG
Trigger: ACCCCCGAGGGCCCTGAGTCATGTGTTTCTTTTTGG...ATTTCCCTCACCAGGTGCTGGCTGGCCTAATAACTGGCGCTGTCCTGGGCTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000585361.5
CDS-3UTR GCA 90 bp GTTTTTAGCCAGTTTTCAAGTGCTGCCTATGCCGTTGGGCATGGTCCAGGGACCCCTCGGCTATCACGATaGCCGCGCCCAGCGTGGACT +
Preference number: 4 (lower is better)
Translates to: VFSQFSSAAYAVGHGPGTPRLSR*PRPAWT
Trigger: AGTCCACGCTGGGCGCGGGCATCGTGATAGCCGAGG...GGTCCCTGGACCATGCCCAACGGCATAGGCAGCACTTGAAAACTGGCTAAAAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000588558.5
ENST00000593115.1
CDS-3UTR GCA 90 bp CTTGAGAGGAAAGGCAGAGGGAGGACCAACTTATCTGGGAGAGAGAAGGCCCATGAGAGTGCAAGGCAATaGCCAGGCCCAGGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: LERKGRGRTNLSGREKAHESARQ*PGPGQP
Trigger: GGGCTGCCCTGGGCCTGGGCATTGCCTTGCACTCTC...ATGGGCCTTCTCTCTCCCAGATAAGTTGGTCCTCCCTCTGCCTTTCCTCTCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269097.9
ENST00000585361.5
ENST00000588558.5
ENST00000590253.2
CDS-3UTR GCA 90 bp GCCGCCCTGGCTGCCCCTCACAGTGTTGCAAGAACCCGCTGGTCTTGCTGTTGCAGAACCCGCTGGTCTTaGTGTTGCCTTTGCTCTTTG +
Preference number: 4 (lower is better)
Translates to: AALAAPHSVARTRWSCCCRTRWS*CCLCSL
Trigger: CAAAGAGCAAAGGCAACAGCAAGACCAGCGGGTTCT...GCAACAGCAAGACCAGCGGGTTCTTGCAACACTGTGAGGGGCAGCCAGGGCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269097.9
ENST00000590253.2
CDS-3UTR CCA 90 bp GCCGTCATTATGGGCCAGAGGGCTGCTCCTGTGATCATGCAGTGTCCAGAAGGGCTGCCTCCTGGAGTGTaGTGGTCACAGAGTGTTGGC +
Preference number: 4 (lower is better)
Translates to: AVIMGQRAAPVIMQCPEGLPPGV*WSQSVG
Trigger: GCCAACACTCTGTGACCACCACACTCCAGGAGGCAG...CCCTTCTGGACACTGCATGATCACAGGAGCAGCCCTCTGGCCCATAATGACGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585361.5
ENST00000588558.5
CDS-3UTR CCA 90 bp GAGTGGCCACCTGCGAAGACAGGGCCGTCATTATGGGCCAGAGGGCTGCTCCTGGAGGACCAACTTATCTaGGAGAGAGAAGGCCCATCT +
Preference number: 4 (lower is better)
Translates to: EWPPAKTGPSLWARGLLLEDQLI*EREGPS
Trigger: AGATGGGCCTTCTCTCTCCCAGATAAGTTGGTCCTC...CAGGAGCAGCCCTCTGGCCCATAATGACGGCCCTGTCTTCGCAGGTGGCCACTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585361.5
ENST00000588558.5
CDS-3UTR CCA 90 bp GGGGGCTTGAGAGGAAAGGCAGAGGGAGGACCAACTTATCTGGGAGAGAGAAGGTTATTGGGGCCGCCCTaGCTGCCCCTCACAGTGTTG +
Preference number: 4 (lower is better)
Translates to: GGLRGKAEGGPTYLGERRLLGPP*LPLTVL
Trigger: CAACACTGTGAGGGGCAGCCAGGGCGGCCCCAATAA...CCTTCTCTCTCCCAGATAAGTTGGTCCTCCCTCTGCCTTTCCTCTCAAGCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269097.9
ENST00000590253.2
CDS-3UTR TCA 90 bp TATTCAAGGGCTTTATTGGGGCCGCCCTGGCTGCCCCTCACAGTGTTGCAAGAAGTGCTTCCTGGGCACTaGACATGTGCACTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: YSRALLGPPWLPLTVLQEVLPGH*TCALPR
Trigger: CCTGGGCAGTGCACATGTTCAGTGCCCAGGAAGCAC...TTCTTGCAACACTGTGAGGGGCAGCCAGGGCGGCCCCAATAAAGCCCTTGAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269097.9
ENST00000590253.2
CDS-3UTR GCA 90 bp GTGTCTCTGTCCTTAGCAGCTACCGTGATGCCCAGCACAAAGCATGCTTACATGCCTCGGCTATCACGATaGCCGCGCCCAGCGTGGACT +
Preference number: 4 (lower is better)
Translates to: VSLSLAATVMPSTKHAYMPRLSR*PRPAWT
Trigger: AGTCCACGCTGGGCGCGGGCATCGTGATAGCCGAGG...CATGTAAGCATGCTTTGTGCTGGGCATCACGGTAGCTGCTAAGGACAGAGACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593115.1
CDS-3UTR GCA 90 bp TGTATCCACTCAGGCCGCTCACACCACTTGAAGGCTAGGCTGATGGACCAAGAAGCCCGAGTGGCCACCTaGGAAGACAGGGCCGTCATT +
Preference number: 4 (lower is better)
Translates to: CIHSGRSHHLKARLMDQEARVAT*EDRAVI
Trigger: AATGACGGCCCTGTCTTCGCAGGTGGCCACTCGGGC...TTCTTGGTCCATCAGCCTAGCCTTCAAGTGGTGTGAGCGGCCTGAGTGGATACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585361.5
ENST00000588558.5
CDS-3UTR GCA 90 bp GCTGCCTCCTGGAGTGTGGTGGTCACAGAGTGTTGGCTTTGTGGGAGGGAAAGGTGCCCCTCACAGTGTTaGAAGAACCCGCTGGTCTTG +
Preference number: 4 (lower is better)
Translates to: AASWSVVVTECWLCGRERCPSQC*KNPLVL
Trigger: CAAGACCAGCGGGTTCTTGCAACACTGTGAGGGGCA...CCTTTCCCTCCCACAAAGCCAACACTCTGTGACCACCACACTCCAGGAGGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269097.9
ENST00000588558.5
ENST00000590253.2
CDS-3UTR CCA 90 bp GAGCCTGGCTGTAGTAACCAGACTCATGGACCCACCAAAAGGGCCTGTCTCCAATCCAGCCAGGCTAGCTaGTTCTGTAGCGCCTCGGCT +
Preference number: 4 (lower is better)
Translates to: EPGCSNQTHGPTKRACLQSSQAS*FCSASA
Trigger: AGCCGAGGCGCTACAGAACCAGCTAGCCTGGCTGGA...TTGGAGACAGGCCCTTTTGGTGGGTCCATGAGTCTGGTTACTACAGCCAGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585361.5
ENST00000588558.5
CDS-3UTR CCA 90 bp CAAGTGCTGCCTATGCCGTTGGGCATGGTCCAGGGACCACACCTTAATCTGCAATCCAGCCAGGCTAGCTaGTTCTGTAGCGCCTCGGCT +
Preference number: 4 (lower is better)
Translates to: QVLPMPLGMVQGPHLNLQSSQAS*FCSASA
Trigger: AGCCGAGGCGCTACAGAACCAGCTAGCCTGGCTGGA...TTGCAGATTAAGGTGTGGTCCCTGGACCATGCCCAACGGCATAGGCAGCACTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588558.5
ENST00000593115.1
CDS-3UTR CCA 90 bp CATTATGGGCCAGAGGGCTGCTCCTGTGATCATGCAGTGTCCAGAAGGGCTGCCAGGCAGGCTATCTTCTaGCCATTTCCCAGCTGTGCC +
Preference number: 4 (lower is better)
Translates to: HYGPEGCSCDHAVSRRAARQAIF*PFPSCA
Trigger: GGCACAGCTGGGAAATGGCCAGAAGATAGCCTGCCT...GGCAGCCCTTCTGGACACTGCATGATCACAGGAGCAGCCCTCTGGCCCATAATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585361.5
ENST00000588558.5
CDS-3UTR CCA 90 bp TATCTTCTGGCCATTTCCCAGCTGTGCCCGACGCACCTGGGCATAGCAGGGAGAATGGGCGGTGCTTCCTaGGCACTGAACATGTGCACT +
Preference number: 4 (lower is better)
Translates to: YLLAISQLCPTHLGIAGRMGGAS*ALNMCT
Trigger: AGTGCACATGTTCAGTGCCCAGGAAGCACCGCCCAT...TCTCCCTGCTATGCCCAGGTGCGTCGGGCACAGCTGGGAAATGGCCAGAAGATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000585361.5
ENST00000588558.5
ENST00000590253.2
CDS-3UTR CCA 90 bp TATTCAAGGGCTTTATTGGGGCCGCCCTGGCTGCCCCTCACAGTGTTGCAAGAAGTCAGGAAGAGTGGATaGGCGGTGCTTCCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: YSRALLGPPWLPLTVLQEVRKSG*AVLPGH
Trigger: GTGCCCAGGAAGCACCGCCCATCCACTCTTCCTGAC...TTCTTGCAACACTGTGAGGGGCAGCCAGGGCGGCCCCAATAAAGCCCTTGAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269097.9
ENST00000590253.2
CDS-3UTR CCA 90 bp CCTGGAGTGTGGTGGTCACAGAGTGTTGGCTTTGTGGGAGGGAAAGGAAAGGGAGTCAGGAAGAGTGGATaGGCGGTGCTTCCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: PGVWWSQSVGFVGGKGKGVRKSG*AVLPGH
Trigger: GTGCCCAGGAAGCACCGCCCATCCACTCTTCCTGAC...TCCCTTTCCTTTCCCTCCCACAAAGCCAACACTCTGTGACCACCACACTCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269097.9
ENST00000585361.5
ENST00000588558.5
ENST00000590253.2
CDS-3UTR CCA 90 bp CATTTCCCAGCTGTGCCCGACGCACCTGGGCATAGCAGGGAGAGTGCAAGGCAAGTGGTCACAGAGTGTTaGCTTTGTGGGAGGGAAAGG +
Preference number: 4 (lower is better)
Translates to: HFPAVPDAPGHSRESARQVVTEC*LCGRER
Trigger: CCTTTCCCTCCCACAAAGCCAACACTCTGTGACCAC...TTGCCTTGCACTCTCCCTGCTATGCCCAGGTGCGTCGGGCACAGCTGGGAAATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000585361.5
ENST00000588558.5
ENST00000590253.2
CDS-3UTR CCA 90 bp TGGAGTGTGGTGGTCACAGAGTGTTGGCTTTGTGGGAGGGAAAGGAAAGGGAGGGATGGGGCTGCCTCCTaGAGTGTGGTGGTCACAGAG +
Preference number: 4 (lower is better)
Translates to: WSVVVTECWLCGRERKGRDGAAS*SVVVTE
Trigger: CTCTGTGACCACCACACTCCAGGAGGCAGCCCCATC...CCTCCCTTTCCTTTCCCTCCCACAAAGCCAACACTCTGTGACCACCACACTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269097.9
ENST00000585361.5
ENST00000588558.5
ENST00000590253.2
CDS-3UTR CCA 90 bp GAGCCTGGCTGTAGTAACCAGACTCATGGACCCACCAAAAGGGCCTGTCTCCAAGATGGGGCTGCCTCCTaGAGTGTGGTGGTCACAGAG +
Preference number: 4 (lower is better)
Translates to: EPGCSNQTHGPTKRACLQDGAAS*SVVVTE
Trigger: CTCTGTGACCACCACACTCCAGGAGGCAGCCCCATC...TTGGAGACAGGCCCTTTTGGTGGGTCCATGAGTCTGGTTACTACAGCCAGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585361.5
ENST00000588558.5
CDS-3UTR CCA 90 bp GCACTCGGGGAGTCATCAGCCAGCCCAGGACAGCGCCAGTTATTAGGCCAGCCAGAGGACCAACTTATCTaGGAGAGAGAAGGCCCATCT +
Preference number: 4 (lower is better)
Translates to: ALGESSASPGQRQLLGQPEDQLI*EREGPS
Trigger: AGATGGGCCTTCTCTCTCCCAGATAAGTTGGTCCTC...TGGCTGGCCTAATAACTGGCGCTGTCCTGGGCTGGCTGATGACTCCCCGAGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585361.5
ENST00000588558.5
CDS-3UTR CCA 90 bp AGCACAAGGCAGGCTATCTTCTGGCCATTTCCCAGCTGTGCCCGACGCACCTGGGTTGCAAGAACCCGCTaGTCTTGCTGTTGCCTTTGC +
Preference number: 4 (lower is better)
Translates to: STRQAIFWPFPSCARRTWVARTR*SCCCLC
Trigger: GCAAAGGCAACAGCAAGACCAGCGGGTTCTTGCAAC...CCAGGTGCGTCGGGCACAGCTGGGAAATGGCCAGAAGATAGCCTGCCTTGTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000585361.5
ENST00000588558.5
ENST00000590253.2
CDS-3UTR TCA 90 bp GGGGGCTTGAGAGGAAAGGCAGAGGGAGGACCAACTTATCTGGGAGAGAGAAGGAGAGGGCTGCTCCTGTaGTCATGCAGTGTCCAGAAG +
Preference number: 4 (lower is better)
Translates to: GGLRGKAEGGPTYLGERRRGLLL*SCSVQK
Trigger: CTTCTGGACACTGCATGATCACAGGAGCAGCCCTCT...CCTTCTCTCTCCCAGATAAGTTGGTCCTCCCTCTGCCTTTCCTCTCAAGCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269097.9
ENST00000585361.5
ENST00000588558.5
CDS-3UTR TCA 90 bp AGAAGAGGGGAACTGGTGAACCTGGGCTGGAGCCTGGCTGTAGTAACCAGACTCAGAGGGCTGCTCCTGTaGTCATGCAGTGTCCAGAAG +
Preference number: 4 (lower is better)
Translates to: RRGELVNLGWSLAVVTRLRGLLL*SCSVQK
Trigger: CTTCTGGACACTGCATGATCACAGGAGCAGCCCTCT...GAGTCTGGTTACTACAGCCAGGCTCCAGCCCAGGTTCACCAGTTCCCCTCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585361.5
ENST00000588558.5
CDS-3UTR TCA 90 bp CTGCCTCCTGGAGTGTGGTGGTCACAGAGTGTTGGCTTTGTGGGAGGGAAAGGAAGAGGGCTGCTCCTGTaGTCATGCAGTGTCCAGAAG +
Preference number: 4 (lower is better)
Translates to: LPPGVWWSQSVGFVGGKGRGLLL*SCSVQK
Trigger: CTTCTGGACACTGCATGATCACAGGAGCAGCCCTCT...TCCTTTCCCTCCCACAAAGCCAACACTCTGTGACCACCACACTCCAGGAGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269097.9
ENST00000585361.5
ENST00000588558.5
CDS-3UTR TCA 90 bp GTGGCCACCTGCGAAGACAGGGCCGTCATTATGGGCCAGAGGGCTGCTCCTGTGGGAAATGTGCTAAGATaGAGATTCGCGACAAGCCAA +
Preference number: 4 (lower is better)
Translates to: VATCEDRAVIMGQRAAPVGNVLR*RFATSQ
Trigger: TTGGCTTGTCGCGAATCTTCATCTTAGCACATTTCC...CACAGGAGCAGCCCTCTGGCCCATAATGACGGCCCTGTCTTCGCAGGTGGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585361.5
ENST00000588558.5
CDS-3UTR GCA 90 bp AGTATTCAAGGGCTTTATTGGGGCCGCCCTGGCTGCCCCTCACAGTGTTGCAAGGGTACTGTTTCCTCCTaGGCTCTCCTCCGGTTTTCC +
Preference number: 4 (lower is better)
Translates to: SIQGLYWGRPGCPSQCCKGTVSS*ALLRFS
Trigger: GGAAAACCGGAGGAGAGCGCAGGAGGAAACAGTACC...CTTGCAACACTGTGAGGGGCAGCCAGGGCGGCCCCAATAAAGCCCTTGAATACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000269097.9
CDS-3UTR CCA 90 bp CTGCCTCCTGGAGTGTGGTGGTCACAGAGTGTTGGCTTTGTGGGAGGGAAAGGAAGGCAGGCTATCTTCTaGCCATTTCCCAGCTGTGCC +
Preference number: 4 (lower is better)
Translates to: LPPGVWWSQSVGFVGGKGRQAIF*PFPSCA
Trigger: GGCACAGCTGGGAAATGGCCAGAAGATAGCCTGCCT...TCCTTTCCCTCCCACAAAGCCAACACTCTGTGACCACCACACTCCAGGAGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269097.9
ENST00000585361.5
ENST00000588558.5
ENST00000590253.2
CDS-3UTR CCA 90 bp GGGGGCTTGAGAGGAAAGGCAGAGGGAGGACCAACTTATCTGGGAGAGAGAAGGATGGGCGGTGCTTCCTaGGCACTGAACATGTGCACT +
Preference number: 4 (lower is better)
Translates to: GGLRGKAEGGPTYLGERRMGGAS*ALNMCT
Trigger: AGTGCACATGTTCAGTGCCCAGGAAGCACCGCCCAT...CCTTCTCTCTCCCAGATAAGTTGGTCCTCCCTCTGCCTTTCCTCTCAAGCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269097.9
ENST00000585361.5
ENST00000588558.5
ENST00000590253.2
CDS-3UTR CCA 90 bp TGGAGTGTGGTGGTCACAGAGTGTTGGCTTTGTGGGAGGGAAAGGAAAGGGAGGCTGCCTCCTGGAGTGTaGTGGTCACAGAGTGTTGGC +
Preference number: 4 (lower is better)
Translates to: WSVVVTECWLCGRERKGRLPPGV*WSQSVG
Trigger: GCCAACACTCTGTGACCACCACACTCCAGGAGGCAG...CCTCCCTTTCCTTTCCCTCCCACAAAGCCAACACTCTGTGACCACCACACTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269097.9
ENST00000585361.5
ENST00000588558.5
ENST00000590253.2
CDS-3UTR CCA 90 bp CAGCAGCCCCATGGCCAGCACAAGGCAGGCTATCTTCTGGCCATTTCCCAGCTGGAGGACCAACTTATCTaGGAGAGAGAAGGCCCATCT +
Preference number: 4 (lower is better)
Translates to: QQPHGQHKAGYLLAISQLEDQLI*EREGPS
Trigger: AGATGGGCCTTCTCTCTCCCAGATAAGTTGGTCCTC...CAGCTGGGAAATGGCCAGAAGATAGCCTGCCTTGTGCTGGCCATGGGGCTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000585361.5
ENST00000588558.5
ENST00000590253.2
CDS-3UTR CCA 90 bp GCTGCCTCCTGGAGTGTGGTGGTCACAGAGTGTTGGCTTTGTGGGAGGGAAAGGGTTGCAAGAACCCGCTaGTCTTGCTGTTGCCTTTGC +
Preference number: 4 (lower is better)
Translates to: AASWSVVVTECWLCGRERVARTR*SCCCLC
Trigger: GCAAAGGCAACAGCAAGACCAGCGGGTTCTTGCAAC...CCTTTCCCTCCCACAAAGCCAACACTCTGTGACCACCACACTCCAGGAGGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269097.9
ENST00000585361.5
ENST00000588558.5
ENST00000590253.2
CDS-3UTR CCA 90 bp CTTGAGAGGAAAGGCAGAGGGAGGACCAACTTATCTGGGAGAGAGAAGGCCCATTTATTGGGGCCGCCCTaGCTGCCCCTCACAGTGTTG +
Preference number: 4 (lower is better)
Translates to: LERKGRGRTNLSGREKAHLLGPP*LPLTVL
Trigger: CAACACTGTGAGGGGCAGCCAGGGCGGCCCCAATAA...ATGGGCCTTCTCTCTCCCAGATAAGTTGGTCCTCCCTCTGCCTTTCCTCTCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269097.9
ENST00000590253.2
CDS-3UTR GCA 90 bp AGTGTGGTGGTCACAGAGTGTTGGCTTTGTGGGAGGGAAAGGAAAGGGAGGCACAGAGTGGATGGGCGGTaGTTCCTGGGCACTGAACAT +
Preference number: 4 (lower is better)
Translates to: SVVVTECWLCGRERKGRHRVDGR*FLGTEH
Trigger: ATGTTCAGTGCCCAGGAAGCACCGCCCATCCACTCT...GTGCCTCCCTTTCCTTTCCCTCCCACAAAGCCAACACTCTGTGACCACCACACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269097.9
ENST00000585361.5
ENST00000588558.5
ENST00000590253.2
CDS-3UTR GCA 90 bp CCTGGAGTGTGGTGGTCACAGAGTGTTGGCTTTGTGGGAGGGAAAGGAAAGGGAAGAGTGGATGGGCGGTaGTTCCTGGGCACTGAACAT +
Preference number: 4 (lower is better)
Translates to: PGVWWSQSVGFVGGKGKGRVDGR*FLGTEH
Trigger: ATGTTCAGTGCCCAGGAAGCACCGCCCATCCACTCT...TCCCTTTCCTTTCCCTCCCACAAAGCCAACACTCTGTGACCACCACACTCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269097.9
ENST00000585361.5
ENST00000588558.5
ENST00000590253.2
CDS-3UTR GCA 90 bp CATTATGGGCCAGAGGGCTGCTCCTGTGATCATGCAGTGTCCAGAAGGGCTGCCAGAACCCGCTGGTCTTaGTGTTGCCTTTGCTCTTTG +
Preference number: 4 (lower is better)
Translates to: HYGPEGCSCDHAVSRRAARTRWS*CCLCSL
Trigger: CAAAGAGCAAAGGCAACAGCAAGACCAGCGGGTTCT...GGCAGCCCTTCTGGACACTGCATGATCACAGGAGCAGCCCTCTGGCCCATAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585361.5
ENST00000588558.5
CDS-3UTR GCA 90 bp TCTCTGTCCTTAGCAGCTACCGTGATGCCCAGCACAAAGCATGCTTACATGACTGGGTGGGGACCAGGATaGCGGAGGGCTTCTCTGTCT +
Preference number: 4 (lower is better)
Translates to: SLSLAATVMPSTKHAYMTGWGPG*RRASLS
Trigger: AGACAGAGAAGCCCTCCGGCATCCTGGTCCCCACCC...AGTCATGTAAGCATGCTTTGTGCTGGGCATCACGGTAGCTGCTAAGGACAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593115.1
CDS-3UTR CCA 90 bp CCTGGAGTGTGGTGGTCACAGAGTGTTGGCTTTGTGGGAGGGAAAGGAAAGGGAAGGCAGGCTATCTTCTaGCCATTTCCCAGCTGTGCC +
Preference number: 4 (lower is better)
Translates to: PGVWWSQSVGFVGGKGKGRQAIF*PFPSCA
Trigger: GGCACAGCTGGGAAATGGCCAGAAGATAGCCTGCCT...TCCCTTTCCTTTCCCTCCCACAAAGCCAACACTCTGTGACCACCACACTCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269097.9
ENST00000585361.5
ENST00000588558.5
ENST00000590253.2
CDS-3UTR CCA 90 bp TCCTGGAGTGTGGTGGTCACAGAGTGTTGGCTTTGTGGGAGGGAAAGGAAAGGGATGGGCGGTGCTTCCTaGGCACTGAACATGTGCACT +
Preference number: 4 (lower is better)
Translates to: SWSVVVTECWLCGRERKGMGGAS*ALNMCT
Trigger: AGTGCACATGTTCAGTGCCCAGGAAGCACCGCCCAT...CCCTTTCCTTTCCCTCCCACAAAGCCAACACTCTGTGACCACCACACTCCAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269097.9
ENST00000585361.5
ENST00000588558.5
ENST00000590253.2
CDS-3UTR CCA 90 bp CTTGAGAGGAAAGGCAGAGGGAGGACCAACTTATCTGGGAGAGAGAAGGCCCATCTGCCTCCTGGAGTGTaGTGGTCACAGAGTGTTGGC +
Preference number: 4 (lower is better)
Translates to: LERKGRGRTNLSGREKAHLPPGV*WSQSVG
Trigger: GCCAACACTCTGTGACCACCACACTCCAGGAGGCAG...ATGGGCCTTCTCTCTCCCAGATAAGTTGGTCCTCCCTCTGCCTTTCCTCTCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269097.9
ENST00000585361.5
ENST00000588558.5
ENST00000590253.2
CDS-3UTR CCA 90 bp GAGTGTGGTGGTCACAGAGTGTTGGCTTTGTGGGAGGGAAAGGAAAGGGAGGCAGGGGCTAAGACCAGGTaGTGCGGAAGCAGATTTAGG +
Preference number: 4 (lower is better)
Translates to: ECGGHRVLALWEGKEREAGAKTR*CGSRFR
Trigger: CCTAAATCTGCTTCCGCACCACCTGGTCTTAGCCCC...TGCCTCCCTTTCCTTTCCCTCCCACAAAGCCAACACTCTGTGACCACCACACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269097.9
ENST00000585361.5
ENST00000588558.5
ENST00000590253.2
CDS-3UTR CCA 90 bp GGTGAACCTGGGCTGGAGCCTGGCTGTAGTAACCAGACTCATGGACCCACCAAAGTTGCAAGAACCCGCTaGTCTTGCTGTTGCCTTTGC +
Preference number: 4 (lower is better)
Translates to: GEPGLEPGCSNQTHGPTKVARTR*SCCCLC
Trigger: GCAAAGGCAACAGCAAGACCAGCGGGTTCTTGCAAC...TTTGGTGGGTCCATGAGTCTGGTTACTACAGCCAGGCTCCAGCCCAGGTTCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585361.5
ENST00000588558.5
CDS-3UTR TCA 90 bp TTTGATTCAGTAGCTCTGGCCCGGGGCCTGAGAGTCTGCGTTTTTAGCCAGTTTCAAAGCATGCTTACATaGCTCAGGGCCCTCGGGGGT +
Preference number: 4 (lower is better)
Translates to: FDSVALARGLRVCVFSQFQSMLT*LRALGG
Trigger: ACCCCCGAGGGCCCTGAGTCATGTAAGCATGCTTTG...AAACTGGCTAAAAACGCAGACTCTCAGGCCCCGGGCCAGAGCTACTGAATCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000593115.1
CDS-3UTR CCA 90 bp GATTCGCGACAAGCCAACCGCCAAAAGGAAGGTGCAATAAGCCAGGCTAGGCATATGGGCGGTGCTTCCTaGGCACTGAACATGTGCACT +
Preference number: 4 (lower is better)
Translates to: DSRQANRQKEGAISQARHMGGAS*ALNMCT
Trigger: AGTGCACATGTTCAGTGCCCAGGAAGCACCGCCCAT...ATGCCTAGCCTGGCTTATTGCACCTTCCTTTTGGCGGTTGGCTTGTCGCGAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585361.5
ENST00000588558.5
CDS-3UTR CCA 90 bp TTAATCTGCAAGGTGTCTCTGTCCTTAGCAGCTACCGTGATGCCCAGCACAAAGGTCAGGAAGAGTGGATaGGCGGTGCTTCCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: LICKVSLSLAATVMPSTKVRKSG*AVLPGH
Trigger: GTGCCCAGGAAGCACCGCCCATCCACTCTTCCTGAC...CTTTGTGCTGGGCATCACGGTAGCTGCTAAGGACAGAGACACCTTGCAGATTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588558.5
CDS-3UTR CCA 90 bp GAGTGTGGTGGTCACAGAGTGTTGGCTTTGTGGGAGGGAAAGGAAAGGGAGGCAGTGGTCACAGAGTGTTaGCTTTGTGGGAGGGAAAGG +
Preference number: 4 (lower is better)
Translates to: ECGGHRVLALWEGKEREAVVTEC*LCGRER
Trigger: CCTTTCCCTCCCACAAAGCCAACACTCTGTGACCAC...TGCCTCCCTTTCCTTTCCCTCCCACAAAGCCAACACTCTGTGACCACCACACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269097.9
ENST00000585361.5
ENST00000588558.5
ENST00000590253.2
CDS-3UTR CCA 90 bp TATTCAAGGGCTTTATTGGGGCCGCCCTGGCTGCCCCTCACAGTGTTGCAAGAAGTGGTCACAGAGTGTTaGCTTTGTGGGAGGGAAAGG +
Preference number: 4 (lower is better)
Translates to: YSRALLGPPWLPLTVLQEVVTEC*LCGRER
Trigger: CCTTTCCCTCCCACAAAGCCAACACTCTGTGACCAC...TTCTTGCAACACTGTGAGGGGCAGCCAGGGCGGCCCCAATAAAGCCCTTGAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269097.9
ENST00000590253.2
CDS-3UTR CCA 90 bp CTGCCTCCTGGAGTGTGGTGGTCACAGAGTGTTGGCTTTGTGGGAGGGAAAGGAGAGGACCAACTTATCTaGGAGAGAGAAGGCCCATCT +
Preference number: 4 (lower is better)
Translates to: LPPGVWWSQSVGFVGGKGEDQLI*EREGPS
Trigger: AGATGGGCCTTCTCTCTCCCAGATAAGTTGGTCCTC...TCCTTTCCCTCCCACAAAGCCAACACTCTGTGACCACCACACTCCAGGAGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269097.9
ENST00000585361.5
ENST00000588558.5
ENST00000590253.2
CDS-3UTR GCA 90 bp GAGTGTGGTGGTCACAGAGTGTTGGCTTTGTGGGAGGGAAAGGAAAGGGAGGCAAGAACCCGCTGGTCTTaGTGTTGCCTTTGCTCTTTG +
Preference number: 4 (lower is better)
Translates to: ECGGHRVLALWEGKEREARTRWS*CCLCSL
Trigger: CAAAGAGCAAAGGCAACAGCAAGACCAGCGGGTTCT...TGCCTCCCTTTCCTTTCCCTCCCACAAAGCCAACACTCTGTGACCACCACACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269097.9
ENST00000585361.5
ENST00000588558.5
ENST00000590253.2
CDS-3UTR TCA 90 bp AGTATTCAAGGGCTTTATTGGGGCCGCCCTGGCTGCCCCTCACAGTGTTGCAAGGGAAATGTGCTAAGATaGAGATTCGCGACAAGCCAA +
Preference number: 4 (lower is better)
Translates to: SIQGLYWGRPGCPSQCCKGNVLR*RFATSQ
Trigger: TTGGCTTGTCGCGAATCTTCATCTTAGCACATTTCC...CTTGCAACACTGTGAGGGGCAGCCAGGGCGGCCCCAATAAAGCCCTTGAATACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269097.9
CDS-3UTR TCA 90 bp AGTAACCAGACTCATGGACCCACCAAAAGGGCCTGTCTCCAAAAAGAAACAGGGCCAGCCAGCACCTGGTaGGGGAAATGTGCTAAGATG +
Preference number: 4 (lower is better)
Translates to: SNQTHGPTKRACLQKETGPASTW*GKCAKM
Trigger: CATCTTAGCACATTTCCCTCACCAGGTGCTGGCTGG...CCCTGTTTCTTTTTGGAGACAGGCCCTTTTGGTGGGTCCATGAGTCTGGTTACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000588558.5
CDS-3UTR GCA 90 bp TCTCTGTCCTTAGCAGCTACCGTGATGCCCAGCACAAAGCATGCTTACATGACTGCCCAGCACAAAGCATaGTTACATGACTCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: SLSLAATVMPSTKHAYMTAQHKA*LHDSGP
Trigger: GGGCCCTGAGTCATGTAAGCATGCTTTGTGCTGGGC...AGTCATGTAAGCATGCTTTGTGCTGGGCATCACGGTAGCTGCTAAGGACAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593115.1
CDS-3UTR CCA 90 bp CAAAAGGGCCTGTCTCCAAAAAGAAACAGGGAATCACCTGGGAACCTTGTTAAAACAGGGCCGTCATTATaGGCCAGAGGGCTGCTCCTG +
Preference number: 4 (lower is better)
Translates to: QKGLSPKRNRESPGNLVKTGPSL*ARGLLL
Trigger: CAGGAGCAGCCCTCTGGCCCATAATGACGGCCCTGT...TTTAACAAGGTTCCCAGGTGATTCCCTGTTTCTTTTTGGAGACAGGCCCTTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000588558.5
3UTR CAA 72 bp GCGTTTTTAGCCAGTTTTCAAGTGCTGCCTATGCCGTaGGGCATGGTCCAGGGACCACACCTTAATCTGCAA +
Preference number: 4 (lower is better)
Translates to: AFLASFQVLPMP*GMVQGPHLNLQ
Trigger: TTGCAGATTAAGGTGTGGTCCCTGGACCATGCCCAACGGCATAGGCAGCACTTGAAAACTGGCTAAAAACGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000588558.5
ENST00000593115.1
CDS GCA 90 bp CTATCACGATGCCCGCGCCCAGCGTGGACTCCATGGCGGCCCAGCTaGCGACCAGGCCCCGGCTTGCTCCAGGGCGGAAACCAGAGTCCA +
Preference number: 5 (lower is better)
Translates to: LSRCPRPAWTPWRPS*RPGPGLLQGGNQSP
Trigger: TGGACTCTGGTTTCCGCCCTGGAGCAAGCCGGGGCCTGGTCGGCAGCTGGGCCGCCATGGAGTCCACGCTGGGCGCGGGCATCGTGATAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269097.9
ENST00000585361.5
ENST00000588558.5
ENST00000591696.1
ENST00000593115.1
CDS-3UTR CAA 90 bp GCTTTATTGGGGCCGCCCTGGCTGCCCCTCACAGTGTTGCAAGAACCCGCTGGTCGACCAGGCCCCGGCTaGCTCCAGGGCGGAAACCAG +
Preference number: 5 (lower is better)
Translates to: ALLGPPWLPLTVLQEPAGRPGPG*LQGGNQ
Trigger: CTGGTTTCCGCCCTGGAGCAAGCCGGGGCCTGGTCG...ACCAGCGGGTTCTTGCAACACTGTGAGGGGCAGCCAGGGCGGCCCCAATAAAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000269097.9
CDS-3UTR CAA 90 bp CAGCACAAGGCAGGCTATCTTCTGGCCATTTCCCAGCTGTGCCCGACGCACCTGCGACCAGGCCCCGGCTaGCTCCAGGGCGGAAACCAG +
Preference number: 5 (lower is better)
Translates to: QHKAGYLLAISQLCPTHLRPGPG*LQGGNQ
Trigger: CTGGTTTCCGCCCTGGAGCAAGCCGGGGCCTGGTCG...CAGGTGCGTCGGGCACAGCTGGGAAATGGCCAGAAGATAGCCTGCCTTGTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585361.5
ENST00000588558.5
CDS-3UTR CAA 90 bp ACAAGGCAGGCTATCTTCTGGCCATTTCCCAGCTGTGCCCGACGCACCTGGGCACGACCAGGCCCCGGCTaGCTCCAGGGCGGAAACCAG +
Preference number: 5 (lower is better)
Translates to: TRQAIFWPFPSCARRTWARPGPG*LQGGNQ
Trigger: CTGGTTTCCGCCCTGGAGCAAGCCGGGGCCTGGTCG...TGCCCAGGTGCGTCGGGCACAGCTGGGAAATGGCCAGAAGATAGCCTGCCTTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585361.5
ENST00000588558.5
CDS-3UTR CAA 90 bp CCCGACGCACCTGGGCATAGCAGGGAGAGTGCAAGGCAATGCCCAGGCCCAGGGCCGCTGGTCTTGCTGTaGCCTTTGCTCTTTGGGGGC +
Preference number: 5 (lower is better)
Translates to: PDAPGHSRESARQCPGPGPLVLL*PLLFGG
Trigger: GCCCCCAAAGAGCAAAGGCAACAGCAAGACCAGCGG...CCCTGGGCCTGGGCATTGCCTTGCACTCTCCCTGCTATGCCCAGGTGCGTCGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000585361.5
ENST00000588558.5
ENST00000590253.2
CDS CCA 90 bp CATCACCCTTACCCAGCGGCTGCGGGCCCGAGTGGCCACCTGGGCTaGAGCCTGGCTGTAGTAACCAGACTCATGGACCCACCAAAAGGG +
Preference number: 5 (lower is better)
Translates to: HHPYPAAAGPSGHLG*SLAVVTRLMDPPKG
Trigger: CCCTTTTGGTGGGTCCATGAGTCTGGTTACTACAGCCAGGCTCCAGCCCAGGTGGCCACTCGGGCCCGCAGCCGCTGGGTAAGGGTGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591696.1
CDS-3UTR CAA 90 bp GCTGTGCCCGACGCACCTGGGCATAGCAGGGAGAGTGCAAGGCAATGCCCAGGCGGCCGCTCACACCACTaGAAGGCTAGGCTGATGGAC +
Preference number: 5 (lower is better)
Translates to: AVPDAPGHSRESARQCPGGRSHH*KARLMD
Trigger: GTCCATCAGCCTAGCCTTCAAGTGGTGTGAGCGGCC...GCCTGGGCATTGCCTTGCACTCTCCCTGCTATGCCCAGGTGCGTCGGGCACAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000585361.5
ENST00000588558.5
ENST00000590253.2
CDS CCA 90 bp CCCAGAAAGGTGATCCAGAGCCACACGTTCTCCAGCCAGGCTAGCTaGTTCTGTAGCGCCTCGGCTATCACGATGCCCGCGCCCAGCGTG +
Preference number: 5 (lower is better)
Translates to: PRKVIQSHTFSSQAS*FCSASAITMPAPSV
Trigger: CACGCTGGGCGCGGGCATCGTGATAGCCGAGGCGCTACAGAACCAGCTAGCCTGGCTGGAGAACGTGTGGCTCTGGATCACCTTTCTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269097.9
ENST00000585361.5
ENST00000585962.1
ENST00000588558.5
ENST00000591696.1
ENST00000593115.1
CDS-3UTR CAA 90 bp TTGGGGCCGCCCTGGCTGCCCCTCACAGTGTTGCAAGAACCCGCTGGTCTTGCTCCGCTGGTCTTGCTGTaGCCTTTGCTCTTTGGGGGC +
Preference number: 5 (lower is better)
Translates to: LGPPWLPLTVLQEPAGLAPLVLL*PLLFGG
Trigger: GCCCCCAAAGAGCAAAGGCAACAGCAAGACCAGCGG...AGCAAGACCAGCGGGTTCTTGCAACACTGTGAGGGGCAGCCAGGGCGGCCCCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269097.9
ENST00000590253.2
CDS-3UTR CAA 90 bp AAGGGCTTTATTGGGGCCGCCCTGGCTGCCCCTCACAGTGTTGCAAGAACCCGCTATTCAAGGGCTTTATaGGGGCCGCCCTGGCTGCCC +
Preference number: 5 (lower is better)
Translates to: KGFIGAALAAPHSVARTRYSRAL*GPPWLP
Trigger: GGGCAGCCAGGGCGGCCCCAATAAAGCCCTTGAATA...GCGGGTTCTTGCAACACTGTGAGGGGCAGCCAGGGCGGCCCCAATAAAGCCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269097.9
ENST00000590253.2
CDS GCA 90 bp CAGGGCTTACACATGACTCAGGGCCCTCGGGGGTGGGGACCAGGATaGCGGAGGGCTTCTCTGTCTCACCACTTGAAGATGAGGTTGAGC +
Preference number: 5 (lower is better)
Translates to: QGLHMTQGPRGWGPG*RRASLSHHLKMRLS
Trigger: GCTCAACCTCATCTTCAAGTGGTGAGACAGAGAAGCCCTCCGGCATCCTGGTCCCCACCCCCGAGGGCCCTGAGTCATGTGTAAGCCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585962.1
CDS CCA 90 bp GCACTCGGGGAGTCATCAGCCAGCCCAGGACAGCGCCTAGGAGAGTaGAGTGACAACAGCTTCAAGGAGTCTGGGGATATGACCCTCCCC +
Preference number: 5 (lower is better)
Translates to: ALGESSASPGQRLGE*SDNSFKESGDMTLP
Trigger: GGGGAGGGTCATATCCCCAGACTCCTTGAAGCTGTTGTCACTCCACTCTCCTAGGCGCTGTCCTGGGCTGGCTGATGACTCCCCGAGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590639.1
CDS-3UTR CAA 90 bp CCCGAGTGGCCACCTGCGAAGACAGGGCCGTCATTATGGGCCAGAGGGCTGCTCCACTTGAAGATGAGGTaGAGCCACTCGGTGATGAGG +
Preference number: 5 (lower is better)
Translates to: PEWPPAKTGPSLWARGLLHLKMR*SHSVMR
Trigger: CCTCATCACCGAGTGGCTCAACCTCATCTTCAAGTG...GAGCAGCCCTCTGGCCCATAATGACGGCCCTGTCTTCGCAGGTGGCCACTCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585361.5
ENST00000588558.5
CDS-3UTR CAA 90 bp AGCACAAGGCAGGCTATCTTCTGGCCATTTCCCAGCTGTGCCCGACGCACCTGGGGCCGCTCACACCACTaGAAGGCTAGGCTGATGGAC +
Preference number: 5 (lower is better)
Translates to: STRQAIFWPFPSCARRTWGRSHH*KARLMD
Trigger: GTCCATCAGCCTAGCCTTCAAGTGGTGTGAGCGGCC...CCAGGTGCGTCGGGCACAGCTGGGAAATGGCCAGAAGATAGCCTGCCTTGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000585361.5
ENST00000588558.5
ENST00000590253.2
CDS-3UTR CAA 90 bp GGGATGGGGCTGCCTCCTGGAGTGTGGTGGTCACAGAGTGTTGGCTTTGTGGGATATTCAAGGGCTTTATaGGGGCCGCCCTGGCTGCCC +
Preference number: 5 (lower is better)
Translates to: GMGLPPGVWWSQSVGFVGYSRAL*GPPWLP
Trigger: GGGCAGCCAGGGCGGCCCCAATAAAGCCCTTGAATA...TCCCACAAAGCCAACACTCTGTGACCACCACACTCCAGGAGGCAGCCCCATCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269097.9
ENST00000590253.2
CDS TCA 90 bp GGGGTGGGCTCTACAGAAGCTGGGAGCGATGGGAAGATCCTAGACTaGTCCTCCCACTGCCAAAGGCATCCTCTCAGTCCACCCCGTTGC +
Preference number: 5 (lower is better)
Translates to: GVGSTEAGSDGKILD*SSHCQRHPLSPPRC
Trigger: GCAACGGGGTGGACTGAGAGGATGCCTTTGGCAGTGGGAGGATCAGTCTAGGATCTTCCCATCGCTCCCAGCTTCTGTAGAGCCCACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590639.1
CDS CCA 90 bp ATGCCCAGCACAAAGCATGCTTACATGACTCAGGGCCCTCGGGGGTaGGGACCAGGATGCCGGAGGGCTTCTCTGTCTCACCACTTGAAG +
Preference number: 5 (lower is better)
Translates to: MPSTKHAYMTQGPRG*GPGCRRASLSHHLK
Trigger: CTTCAAGTGGTGAGACAGAGAAGCCCTCCGGCATCCTGGTCCCCACCCCCGAGGGCCCTGAGTCATGTAAGCATGCTTTGTGCTGGGCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593115.1
CDS CCA 90 bp GGGCCTGTCTCCAAAAAGAAACACATGACTCAGGGCCCTCGGGGGTaGGGACCAGGATGCCGGAGGGCTTCTCTGTCTCACCACTTGAAG +
Preference number: 5 (lower is better)
Translates to: GPVSKKKHMTQGPRG*GPGCRRASLSHHLK
Trigger: CTTCAAGTGGTGAGACAGAGAAGCCCTCCGGCATCCTGGTCCCCACCCCCGAGGGCCCTGAGTCATGTGTTTCTTTTTGGAGACAGGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000585361.5
CDS-3UTR CAA 90 bp CAAGGTGTCTCTGTCCTTAGCAGCTACCGTGATGCCCAGCACAAAGCATGCTTACGACCAGGCCCCGGCTaGCTCCAGGGCGGAAACCAG +
Preference number: 5 (lower is better)
Translates to: QGVSVLSSYRDAQHKACLRPGPG*LQGGNQ
Trigger: CTGGTTTCCGCCCTGGAGCAAGCCGGGGCCTGGTCG...TAAGCATGCTTTGTGCTGGGCATCACGGTAGCTGCTAAGGACAGAGACACCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593115.1
CDS-3UTR CAA 90 bp CAGCAGCCCCATGGCCAGCACAAGGCAGGCTATCTTCTGGCCATTTCCCAGCTGCTGCCCCTCACAGTGTaGCAAGAACCCGCTGGTCTT +
Preference number: 5 (lower is better)
Translates to: QQPHGQHKAGYLLAISQLLPLTV*QEPAGL
Trigger: AAGACCAGCGGGTTCTTGCAACACTGTGAGGGGCAG...CAGCTGGGAAATGGCCAGAAGATAGCCTGCCTTGTGCTGGCCATGGGGCTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588558.5
ENST00000590253.2
CDS GCA 90 bp AAGCATGCTTACATGACTCAGGGCCCTCGGGGGTGGGGACCAGGATaGCGGAGGGCTTCTCTGTCTCACCACTTGAAGATGAGGTTGAGC +
Preference number: 5 (lower is better)
Translates to: KHAYMTQGPRGWGPG*RRASLSHHLKMRLS
Trigger: GCTCAACCTCATCTTCAAGTGGTGAGACAGAGAAGCCCTCCGGCATCCTGGTCCCCACCCCCGAGGGCCCTGAGTCATGTAAGCATGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593115.1
CDS-3UTR CAA 90 bp CACAAGGCAGGCTATCTTCTGGCCATTTCCCAGCTGTGCCCGACGCACCTGGGCCACTTGAAGATGAGGTaGAGCCACTCGGTGATGAGG +
Preference number: 5 (lower is better)
Translates to: HKAGYLLAISQLCPTHLGHLKMR*SHSVMR
Trigger: CCTCATCACCGAGTGGCTCAACCTCATCTTCAAGTG...GCCCAGGTGCGTCGGGCACAGCTGGGAAATGGCCAGAAGATAGCCTGCCTTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585361.5
ENST00000588558.5
CDS-3UTR CAA 90 bp AGTATTCAAGGGCTTTATTGGGGCCGCCCTGGCTGCCCCTCACAGTGTTGCAAGGGCCGCTCACACCACTaGAAGGCTAGGCTGATGGAC +
Preference number: 5 (lower is better)
Translates to: SIQGLYWGRPGCPSQCCKGRSHH*KARLMD
Trigger: GTCCATCAGCCTAGCCTTCAAGTGGTGTGAGCGGCC...CTTGCAACACTGTGAGGGGCAGCCAGGGCGGCCCCAATAAAGCCCTTGAATACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269097.9
ENST00000590253.2
CDS-3UTR CAA 90 bp CCAGGACAGCGCCAGTTATTAGGCCAGCCAGCACCTGGTGAGGGAAATGTGCTAGGCCGCTCACACCACTaGAAGGCTAGGCTGATGGAC +
Preference number: 5 (lower is better)
Translates to: PGQRQLLGQPAPGEGNVLGRSHH*KARLMD
Trigger: GTCCATCAGCCTAGCCTTCAAGTGGTGTGAGCGGCC...TAGCACATTTCCCTCACCAGGTGCTGGCTGGCCTAATAACTGGCGCTGTCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585361.5
ENST00000588558.5
CDS-3UTR CAA 90 bp CATTTCCCAGCTGTGCCCGACGCACCTGGGCATAGCAGGGAGAGTGCAAGGCAAGGTGGTCACAGAGTGTaGGCTTTGTGGGAGGGAAAG +
Preference number: 5 (lower is better)
Translates to: HFPAVPDAPGHSRESARQGGHRV*ALWEGK
Trigger: CTTTCCCTCCCACAAAGCCAACACTCTGTGACCACC...TTGCCTTGCACTCTCCCTGCTATGCCCAGGTGCGTCGGGCACAGCTGGGAAATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000585361.5
ENST00000588558.5
ENST00000590253.2
CDS-3UTR CAA 90 bp CAGCACAAGGCAGGCTATCTTCTGGCCATTTCCCAGCTGTGCCCGACGCACCTGGGTGGTCACAGAGTGTaGGCTTTGTGGGAGGGAAAG +
Preference number: 5 (lower is better)
Translates to: QHKAGYLLAISQLCPTHLGGHRV*ALWEGK
Trigger: CTTTCCCTCCCACAAAGCCAACACTCTGTGACCACC...CAGGTGCGTCGGGCACAGCTGGGAAATGGCCAGAAGATAGCCTGCCTTGTGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000585361.5
ENST00000588558.5
ENST00000590253.2
CDS-3UTR CAA 90 bp CAGCAGCCCCATGGCCAGCACAAGGCAGGCTATCTTCTGGCCATTTCCCAGCTGAGAGAAGGCCCATCTTaGGGGCTAAGACCAGGTGGT +
Preference number: 5 (lower is better)
Translates to: QQPHGQHKAGYLLAISQLREGPS*GLRPGG
Trigger: ACCACCTGGTCTTAGCCCCAAAGATGGGCCTTCTCT...CAGCTGGGAAATGGCCAGAAGATAGCCTGCCTTGTGCTGGCCATGGGGCTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000585361.5
ENST00000588558.5
ENST00000590253.2
CDS-3UTR CAA 90 bp CACAAGGCAGGCTATCTTCTGGCCATTTCCCAGCTGTGCCCGACGCACCTGGGCGTCTTGCTGTTGCCTTaGCTCTTTGGGGGCTTGAGA +
Preference number: 5 (lower is better)
Translates to: HKAGYLLAISQLCPTHLGVLLLP*LFGGLR
Trigger: TCTCAAGCCCCCAAAGAGCAAAGGCAACAGCAAGAC...GCCCAGGTGCGTCGGGCACAGCTGGGAAATGGCCAGAAGATAGCCTGCCTTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000585361.5
ENST00000588558.5
ENST00000590253.2
CDS-3UTR CAA 90 bp TATTGGGGCCGCCCTGGCTGCCCCTCACAGTGTTGCAAGAACCCGCTGGTCTTGGTCTTGCTGTTGCCTTaGCTCTTTGGGGGCTTGAGA +
Preference number: 5 (lower is better)
Translates to: YWGRPGCPSQCCKNPLVLVLLLP*LFGGLR
Trigger: TCTCAAGCCCCCAAAGAGCAAAGGCAACAGCAAGAC...CAAGACCAGCGGGTTCTTGCAACACTGTGAGGGGCAGCCAGGGCGGCCCCAATA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269097.9
ENST00000590253.2
CDS-3UTR CAA 90 bp GGGGGCTTGAGAGGAAAGGCAGAGGGAGGACCAACTTATCTGGGAGAGAGAAGGCCGCTGGTCTTGCTGTaGCCTTTGCTCTTTGGGGGC +
Preference number: 5 (lower is better)
Translates to: GGLRGKAEGGPTYLGERRPLVLL*PLLFGG
Trigger: GCCCCCAAAGAGCAAAGGCAACAGCAAGACCAGCGG...CCTTCTCTCTCCCAGATAAGTTGGTCCTCCCTCTGCCTTTCCTCTCAAGCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000269097.9
ENST00000585361.5
ENST00000588558.5
ENST00000590253.2
CDS-3UTR CAA 90 bp CCCGAGTGGCCACCTGCGAAGACAGGGCCGTCATTATGGGCCAGAGGGCTGCTCCAAAGCATGCTTCACTaGAAGATGAGGTTGAGCCAC +
Preference number: 5 (lower is better)
Translates to: PEWPPAKTGPSLWARGLLQSMLH*KMRLSH
Trigger: GTGGCTCAACCTCATCTTCAAGTGAAGCATGCTTTG...GAGCAGCCCTCTGGCCCATAATGACGGCCCTGTCTTCGCAGGTGGCCACTCGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588558.5
CDS-3UTR CAA 90 bp GGATGGGGCTGCCTCCTGGAGTGTGGTGGTCACAGAGTGTTGGCTTTGTGGGAGCACTTGAAGATGAGGTaGAGCCACTCGGTGATGAGG +
Preference number: 5 (lower is better)
Translates to: GWGCLLECGGHRVLALWEHLKMR*SHSVMR
Trigger: CCTCATCACCGAGTGGCTCAACCTCATCTTCAAGTG...CTCCCACAAAGCCAACACTCTGTGACCACCACACTCCAGGAGGCAGCCCCATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269097.9
ENST00000585361.5
ENST00000588558.5
CDS-3UTR CAA 90 bp GCTACCGTGATGCCCAGCACAAAGCATGCTTACATGACTCAGGGCCCTCGGGGGCACTTGAAGATGAGGTaGAGCCACTCGGTGATGAGG +
Preference number: 5 (lower is better)
Translates to: ATVMPSTKHAYMTQGPRGHLKMR*SHSVMR
Trigger: CCTCATCACCGAGTGGCTCAACCTCATCTTCAAGTG...CCCCCGAGGGCCCTGAGTCATGTAAGCATGCTTTGTGCTGGGCATCACGGTAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593115.1
CDS-3UTR CAA 90 bp GGCTGCCTCCTGGAGTGTGGTGGTCACAGAGTGTTGGCTTTGTGGGAGGGAAAGAGAGAAGGCCCATCTTaGGGGCTAAGACCAGGTGGT +
Preference number: 5 (lower is better)
Translates to: GCLLECGGHRVLALWEGKREGPS*GLRPGG
Trigger: ACCACCTGGTCTTAGCCCCAAAGATGGGCCTTCTCT...CTTTCCCTCCCACAAAGCCAACACTCTGTGACCACCACACTCCAGGAGGCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269097.9
ENST00000585361.5
ENST00000588558.5
ENST00000590253.2
CDS-3UTR CAA 90 bp AGCACAAGGCAGGCTATCTTCTGGCCATTTCCCAGCTGTGCCCGACGCACCTGGGTCTTGCTGTTGCCTTaGCTCTTTGGGGGCTTGAGA +
Preference number: 5 (lower is better)
Translates to: STRQAIFWPFPSCARRTWVLLLP*LFGGLR
Trigger: TCTCAAGCCCCCAAAGAGCAAAGGCAACAGCAAGAC...CCAGGTGCGTCGGGCACAGCTGGGAAATGGCCAGAAGATAGCCTGCCTTGTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000585361.5
ENST00000588558.5
ENST00000590253.2
CDS-3UTR CAA 90 bp GGTGAACCTGGGCTGGAGCCTGGCTGTAGTAACCAGACTCATGGACCCACCAAAAGAGAAGGCCCATCTTaGGGGCTAAGACCAGGTGGT +
Preference number: 5 (lower is better)
Translates to: GEPGLEPGCSNQTHGPTKREGPS*GLRPGG
Trigger: ACCACCTGGTCTTAGCCCCAAAGATGGGCCTTCTCT...TTTGGTGGGTCCATGAGTCTGGTTACTACAGCCAGGCTCCAGCCCAGGTTCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585361.5
ENST00000588558.5
CDS-3UTR CAA 90 bp GAGTGTGGTGGTCACAGAGTGTTGGCTTTGTGGGAGGGAAAGGAAAGGGAGGCACTGCCCCTCACAGTGTaGCAAGAACCCGCTGGTCTT +
Preference number: 5 (lower is better)
Translates to: ECGGHRVLALWEGKEREALPLTV*QEPAGL
Trigger: AAGACCAGCGGGTTCTTGCAACACTGTGAGGGGCAG...TGCCTCCCTTTCCTTTCCCTCCCACAAAGCCAACACTCTGTGACCACCACACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269097.9
ENST00000588558.5
ENST00000590253.2
CDS TCA 90 bp CGTTGCCCCAGTTGCTCACCAGTTATTAGGCCAGCCAGCACCTGGTaGGGGAAATGTGCTAAGATGAAGATTCGCGACAAGCCAACCGCC +
Preference number: 5 (lower is better)
Translates to: RCPSCSPVIRPASTW*GKCAKMKIRDKPTA
Trigger: GGCGGTTGGCTTGTCGCGAATCTTCATCTTAGCACATTTCCCTCACCAGGTGCTGGCTGGCCTAATAACTGGTGAGCAACTGGGGCAACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590639.1
CDS-3UTR CAA 90 bp TGGGGGCTTGAGAGGAAAGGCAGAGGGAGGACCAACTTATCTGGGAGAGAGAAGGGTGGTCACAGAGTGTaGGCTTTGTGGGAGGGAAAG +
Preference number: 5 (lower is better)
Translates to: WGLERKGRGRTNLSGREKGGHRV*ALWEGK
Trigger: CTTTCCCTCCCACAAAGCCAACACTCTGTGACCACC...CTTCTCTCTCCCAGATAAGTTGGTCCTCCCTCTGCCTTTCCTCTCAAGCCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269097.9
ENST00000585361.5
ENST00000588558.5
ENST00000590253.2
CDS-3UTR CAA 90 bp CCTGGAGTGTGGTGGTCACAGAGTGTTGGCTTTGTGGGAGGGAAAGGAAAGGGAGGTGGTCACAGAGTGTaGGCTTTGTGGGAGGGAAAG +
Preference number: 5 (lower is better)
Translates to: PGVWWSQSVGFVGGKGKGGGHRV*ALWEGK
Trigger: CTTTCCCTCCCACAAAGCCAACACTCTGTGACCACC...TCCCTTTCCTTTCCCTCCCACAAAGCCAACACTCTGTGACCACCACACTCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269097.9
ENST00000585361.5
ENST00000588558.5
ENST00000590253.2
CDS-3UTR CAA 90 bp TGGAGTGTGGTGGTCACAGAGTGTTGGCTTTGTGGGAGGGAAAGGAAAGGGAGGAGAGAAGGCCCATCTTaGGGGCTAAGACCAGGTGGT +
Preference number: 5 (lower is better)
Translates to: WSVVVTECWLCGRERKGRREGPS*GLRPGG
Trigger: ACCACCTGGTCTTAGCCCCAAAGATGGGCCTTCTCT...CCTCCCTTTCCTTTCCCTCCCACAAAGCCAACACTCTGTGACCACCACACTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269097.9
ENST00000585361.5
ENST00000588558.5
ENST00000590253.2
CDS-3UTR CAA 90 bp GGGGGCTTGAGAGGAAAGGCAGAGGGAGGACCAACTTATCTGGGAGAGAGAAGGGTCTTGCTGTTGCCTTaGCTCTTTGGGGGCTTGAGA +
Preference number: 5 (lower is better)
Translates to: GGLRGKAEGGPTYLGERRVLLLP*LFGGLR
Trigger: TCTCAAGCCCCCAAAGAGCAAAGGCAACAGCAAGAC...CCTTCTCTCTCCCAGATAAGTTGGTCCTCCCTCTGCCTTTCCTCTCAAGCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000269097.9
ENST00000585361.5
ENST00000588558.5
ENST00000590253.2
CDS TCA 90 bp CGGGGAAGTAGAACAGAAAGAGGATCTTGGGATCGCCCAGAAAGGTaGTCCAGAGCCACACGTTCTCCAGCCAGGCTAGCTGGTTCTGTA +
Preference number: 5 (lower is better)
Translates to: RGSRTERGSWDRPER*SRATRSPARLAGSV
Trigger: TACAGAACCAGCTAGCCTGGCTGGAGAACGTGTGGCTCTGGATCACCTTTCTGGGCGATCCCAAGATCCTCTTTCTGTTCTACTTCCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269097.9
ENST00000585361.5
ENST00000585962.1
ENST00000588558.5
ENST00000591696.1
ENST00000593115.1
CDS-3UTR CAA 90 bp AGTAACCAGACTCATGGACCCACCAAAAGGGCCTGTCTCCAAAAAGAAACAGGGCCGCTGGTCTTGCTGTaGCCTTTGCTCTTTGGGGGC +
Preference number: 5 (lower is better)
Translates to: SNQTHGPTKRACLQKETGPLVLL*PLLFGG
Trigger: GCCCCCAAAGAGCAAAGGCAACAGCAAGACCAGCGG...CCCTGTTTCTTTTTGGAGACAGGCCCTTTTGGTGGGTCCATGAGTCTGGTTACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000588558.5
CDS-3UTR CAA 90 bp TATTCAAGGGCTTTATTGGGGCCGCCCTGGCTGCCCCTCACAGTGTTGCAAGAAAACAGAAAGAGGATCTaGGGATCGCCCAGAAAGGTG +
Preference number: 5 (lower is better)
Translates to: YSRALLGPPWLPLTVLQENRKRI*GSPRKV
Trigger: CACCTTTCTGGGCGATCCCAAGATCCTCTTTCTGTT...TTCTTGCAACACTGTGAGGGGCAGCCAGGGCGGCCCCAATAAAGCCCTTGAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000269097.9
CDS-3UTR CAA 90 bp AGTATTCAAGGGCTTTATTGGGGCCGCCCTGGCTGCCCCTCACAGTGTTGCAAGCCAAAAAGAAACCACTaGAAGATGAGGTTGAGCCAC +
Preference number: 5 (lower is better)
Translates to: SIQGLYWGRPGCPSQCCKPKRNH*KMRLSH
Trigger: GTGGCTCAACCTCATCTTCAAGTGGTTTCTTTTTGG...CTTGCAACACTGTGAGGGGCAGCCAGGGCGGCCCCAATAAAGCCCTTGAATACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000269097.9
CDS GCA 90 bp AATAAAACTGATACAGAGGCAAGAGATTGTGGTAAGCCGTGTGTGTaGTCTGAGATACTCAGCCGTCCCACTCTACCCCCTCTCACTGCA +
Preference number: 5 (lower is better)
Translates to: NKTDTEARDCGKPCV*SEILSRPTLPPLTA
Trigger: TGCAGTGAGAGGGGGTAGAGTGGGACGGCTGAGTATCTCAGAGCACACACACGGCTTACCACAATCTCTTGCCTCTGTATCAGTTTTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585962.1
CDS CCA 90 bp AAAAATGTCAAAATCCTCTGGTCTAGCAAGTGCTTGGCTGGGCCCTaGGAACCACACAATGAAGAGGCTGCTGTGGCCAGAAAGAGAAAA +
Preference number: 5 (lower is better)
Translates to: KNVKILWSSKCLAGP*EPHNEEAAVARKRK
Trigger: TTTTCTCTTTCTGGCCACAGCAGCCTCTTCATTGTGTGGTTCCCAGGGCCCAGCCAAGCACTTGCTAGACCAGAGGATTTTGACATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585962.1
CDS TCA 90 bp CACGTGCTGGGGAGGGATATACAGAAGGCACTTGCCTCTCCCCTCTaGAAACTGAGCCTAGTATATATACAACAAGTGCTCACACAGAAA +
Preference number: 5 (lower is better)
Translates to: HVLGRDIQKALASPL*KLSLVYIQQVLTQK
Trigger: TTTCTGTGTGAGCACTTGTTGTATATATACTAGGCTCAGTTTTCAGAGGGGAGAGGCAAGTGCCTTCTGTATATCCCTCCCCAGCACGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585962.1
CDS GCA 72 bp TGCCCGCGCCCAGCGTGGACTCCATGGCGGCCCAGCTaGCGACCAGGCCCCGGCTTGCTCCAGGGCGGAAAC +
Preference number: 6 (lower is better)
Translates to: CPRPAWTPWRPS*RPGPGLLQGGN
Trigger: GTTTCCGCCCTGGAGCAAGCCGGGGCCTGGTCGGCAGCTGGGCCGCCATGGAGTCCACGCTGGGCGCGGGCA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269097.9
ENST00000585361.5
ENST00000585962.1
ENST00000588558.5
ENST00000591696.1
ENST00000593115.1
CDS CCA 72 bp GTAGCGCCTCGGCTATCACGATGCCCGCGCCCAGCGTaGACTCCATGGCGGCCCAGCTGCCGACCAGGCCCC +
Preference number: 6 (lower is better)
Translates to: VAPRLSRCPRPA*TPWRPSCRPGP
Trigger: GGGGCCTGGTCGGCAGCTGGGCCGCCATGGAGTCCACGCTGGGCGCGGGCATCGTGATAGCCGAGGCGCTAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269097.9
ENST00000585361.5
ENST00000585962.1
ENST00000588558.5
ENST00000591696.1
ENST00000593115.1
CDS GCA 72 bp AGGCTAGCTGGTTCTGTAGCGCCTCGGCTATCACGATaGCCGCGCCCAGCGTGGACTCCATGGCGGCCCAGC +
Preference number: 6 (lower is better)
Translates to: RLAGSVAPRLSR*PRPAWTPWRPS
Trigger: GCTGGGCCGCCATGGAGTCCACGCTGGGCGCGGGCATCGTGATAGCCGAGGCGCTACAGAACCAGCTAGCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269097.9
ENST00000585361.5
ENST00000585962.1
ENST00000588558.5
ENST00000591696.1
ENST00000593115.1
CDS GCA 72 bp CACATGACTCAGGGCCCTCGGGGGTGGGGACCAGGATaGCGGAGGGCTTCTCTGTCTCACCACTTGAAGATG +
Preference number: 6 (lower is better)
Translates to: HMTQGPRGWGPG*RRASLSHHLKM
Trigger: CATCTTCAAGTGGTGAGACAGAGAAGCCCTCCGGCATCCTGGTCCCCACCCCCGAGGGCCCTGAGTCATGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000585361.5
ENST00000585962.1
CDS CCA 72 bp GTGATCCAGAGCCACACGTTCTCCAGCCAGGCTAGCTaGTTCTGTAGCGCCTCGGCTATCACGATGCCCGCG +
Preference number: 6 (lower is better)
Translates to: VIQSHTFSSQAS*FCSASAITMPA
Trigger: CGCGGGCATCGTGATAGCCGAGGCGCTACAGAACCAGCTAGCCTGGCTGGAGAACGTGTGGCTCTGGATCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269097.9
ENST00000585361.5
ENST00000585962.1
ENST00000588558.5
ENST00000591696.1
ENST00000593115.1
CDS CAA 90 bp CGGGGGTGGGGACCAGGATGCCGGAGGGCTTCTCTGTCTCACCACTaGAAGATGAGGTTGAGCCACTCGGTGATGAGGCTGATCCAGAGC +
Preference number: 6 (lower is better)
Translates to: RGWGPGCRRASLSHH*KMRLSHSVMRLIQS
Trigger: GCTCTGGATCAGCCTCATCACCGAGTGGCTCAACCTCATCTTCAAGTGGTGAGACAGAGAAGCCCTCCGGCATCCTGGTCCCCACCCCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000585361.5
ENST00000585962.1
ENST00000593115.1
CDS GCA 72 bp TACATGACTCAGGGCCCTCGGGGGTGGGGACCAGGATaGCGGAGGGCTTCTCTGTCTCACCACTTGAAGATG +
Preference number: 6 (lower is better)
Translates to: YMTQGPRGWGPG*RRASLSHHLKM
Trigger: CATCTTCAAGTGGTGAGACAGAGAAGCCCTCCGGCATCCTGGTCCCCACCCCCGAGGGCCCTGAGTCATGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593115.1
CDS CCA 72 bp ACAAAGCATGCTTACATGACTCAGGGCCCTCGGGGGTaGGGACCAGGATGCCGGAGGGCTTCTCTGTCTCAC +
Preference number: 6 (lower is better)
Translates to: TKHAYMTQGPRG*GPGCRRASLSH
Trigger: GTGAGACAGAGAAGCCCTCCGGCATCCTGGTCCCCACCCCCGAGGGCCCTGAGTCATGTAAGCATGCTTTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593115.1
CDS CAA 90 bp CCAGGATGCCGGAGGGCTTCTCTGTCTCACCACTTGAAGATGAGGTaGAGCCACTCGGTGATGAGGCTGATCCAGAGCACCGCGATGCCC +
Preference number: 6 (lower is better)
Translates to: PGCRRASLSHHLKMR*SHSVMRLIQSTAMP
Trigger: GGGCATCGCGGTGCTCTGGATCAGCCTCATCACCGAGTGGCTCAACCTCATCTTCAAGTGGTGAGACAGAGAAGCCCTCCGGCATCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000585361.5
ENST00000585962.1
ENST00000593115.1
CDS GCA 72 bp TCCCACTGCCAAAGGCATCCTCTCAGTCCACCCCGTTaGCCCAGTTGCTCACCAGTTATTAGGCCAGCCAGC +
Preference number: 6 (lower is better)
Translates to: SHCQRHPLSPPR*PSCSPVIRPAS
Trigger: GCTGGCTGGCCTAATAACTGGTGAGCAACTGGGGCAACGGGGTGGACTGAGAGGATGCCTTTGGCAGTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590639.1
CDS CCA 72 bp TCCAAAAAGAAACACATGACTCAGGGCCCTCGGGGGTaGGGACCAGGATGCCGGAGGGCTTCTCTGTCTCAC +
Preference number: 6 (lower is better)
Translates to: SKKKHMTQGPRG*GPGCRRASLSH
Trigger: GTGAGACAGAGAAGCCCTCCGGCATCCTGGTCCCCACCCCCGAGGGCCCTGAGTCATGTGTTTCTTTTTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000585361.5
CDS TCA 72 bp ATCAGCCAGCCCAGGACAGCGCCTAGGAGAGTGGAGTaGCAACAGCTTCAAGGAGTCTGGGGATATGACCCT +
Preference number: 6 (lower is better)
Translates to: ISQPRTAPRRVE*QQLQGVWGYDP
Trigger: AGGGTCATATCCCCAGACTCCTTGAAGCTGTTGTCACTCCACTCTCCTAGGCGCTGTCCTGGGCTGGCTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590639.1
CDS CCA 72 bp GAGTCATCAGCCAGCCCAGGACAGCGCCTAGGAGAGTaGAGTGACAACAGCTTCAAGGAGTCTGGGGATATG +
Preference number: 6 (lower is better)
Translates to: ESSASPGQRLGE*SDNSFKESGDM
Trigger: CATATCCCCAGACTCCTTGAAGCTGTTGTCACTCCACTCTCCTAGGCGCTGTCCTGGGCTGGCTGATGACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590639.1
CDS TCA 72 bp AGAACAGAAAGAGGATCTTGGGATCGCCCAGAAAGGTaGTCCAGAGCCACACGTTCTCCAGCCAGGCTAGCT +
Preference number: 6 (lower is better)
Translates to: RTERGSWDRPER*SRATRSPARLA
Trigger: AGCTAGCCTGGCTGGAGAACGTGTGGCTCTGGATCACCTTTCTGGGCGATCCCAAGATCCTCTTTCTGTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269097.9
ENST00000585361.5
ENST00000585962.1
ENST00000588558.5
ENST00000591696.1
ENST00000593115.1
CDS CAA 72 bp TGCCCAGCACAAAGCATGCTTCACTTGAAGATGAGGTaGAGCCACTCGGTGATGAGGCTGATCCAGAGCACC +
Preference number: 6 (lower is better)
Translates to: CPAQSMLHLKMR*SHSVMRLIQST
Trigger: GGTGCTCTGGATCAGCCTCATCACCGAGTGGCTCAACCTCATCTTCAAGTGAAGCATGCTTTGTGCTGGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588558.5
CDS TCA 72 bp AGTTGCTCACCAGTTATTAGGCCAGCCAGCACCTGGTaGGGGAAATGTGCTAAGATGAAGATTCGCGACAAG +
Preference number: 6 (lower is better)
Translates to: SCSPVIRPASTW*GKCAKMKIRDK
Trigger: CTTGTCGCGAATCTTCATCTTAGCACATTTCCCTCACCAGGTGCTGGCTGGCCTAATAACTGGTGAGCAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590639.1
CDS TCA 72 bp GGGACAAGGAATAGAGGGGGAGGCTTATACAGACTTTaGGAGAGGAGAGCACAAAGCAAAGGGCAATTAGGC +
Preference number: 6 (lower is better)
Translates to: GTRNRGGGLYRL*ERRAQSKGQLG
Trigger: GCCTAATTGCCCTTTGCTTTGTGCTCTCCTCTCTCAAAGTCTGTATAAGCCTCCCCCTCTATTCCTTGTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585962.1
CDS CCA 72 bp CACTGTGGTTCCCTTTACATAAGGATGAGGCCCTCGTaGAAAAGAGTGGAAGGGAGGGGAACTCTATGTTGT +
Preference number: 6 (lower is better)
Translates to: HCGSLYIRMRPS*KRVEGRGTLCC
Trigger: ACAACATAGAGTTCCCCTCCCTTCCACTCTTTTCCACGAGGGCCTCATCCTTATGTAAAGGGAACCACAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585962.1
CDS TCA 72 bp GGGAGGGATATACAGAAGGCACTTGCCTCTCCCCTCTaGAAACTGAGCCTAGTATATATACAACAAGTGCTC +
Preference number: 6 (lower is better)
Translates to: GRDIQKALASPL*KLSLVYIQQVL
Trigger: GAGCACTTGTTGTATATATACTAGGCTCAGTTTTCAGAGGGGAGAGGCAAGTGCCTTCTGTATATCCCTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585962.1
CDS CCA 72 bp GGGCAATTAGGCAAGAAAGAAGTGAACAGATCACTGTaGTTCCCTTTACATAAGGATGAGGCCCTCGTGGAA +
Preference number: 6 (lower is better)
Translates to: GQLGKKEVNRSL*FPLHKDEALVE
Trigger: TTCCACGAGGGCCTCATCCTTATGTAAAGGGAACCACAGTGATCTGTTCACTTCTTTCTTGCCTAATTGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585962.1
CDS TCA 72 bp AAGAACACTGGTCTAATGAGTAGGATGGTTGGACTCTaGGGTTTGAGTCCAAGCTGCACAAAGATGCTCAAG +
Preference number: 6 (lower is better)
Translates to: KNTGLMSRMVGL*GLSPSCTKMLK
Trigger: CTTGAGCATCTTTGTGCAGCTTGGACTCAAACCTCAGAGTCCAACCATCCTACTCATTAGACCAGTGTTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585962.1