Pregenerated sensors for G2E3 (Homo sapiens)
Ensembl gene IDs: ENSG00000092140Ensembl transcript IDs: ENST00000206595.11, ENST00000552488.1, ENST00000553504.5
Found 40 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGGATACATAGTTTTAACACAGATTCCCTCATTTCTATAGGTTCCTaGGTGTCAGACACTAACTGCTTGCTTATAGGATCTCTCAAATGT | + |
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Preference number: 1 (lower is better) Translates to: RIHSFNTDSLISIGS*VSDTNCLLIGSLKC Trigger: ACATTTGAGAGATCCTATAAGCAAGCAGTTAGTGTCTGACACCCAGGAACCTATAGAAATGAGGGAATCTGTGTTAAAACTATGTATCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000206595.11 |
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| 3UTR-3UTR GCA 90 bp | AACACAGATTCCCTCATTTCTATAGGTTCCTGGGTGTCAGACACTAACTGCTTGTTGAGATGGAGTCTTTaGTACATTGCCAGGCTGGCT | + |
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Preference number: 2 (lower is better) Translates to: NTDSLISIGSWVSDTNCLLRWSL*YIARLA Trigger: AGCCAGCCTGGCAATGTAGCAAAGACTCCATCTCAA...CAAGCAGTTAGTGTCTGACACCCAGGAACCTATAGAAATGAGGGAATCTGTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000206595.11 |
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| 3UTR-3UTR TCA 90 bp | AACACAGATTCCCTCATTTCTATAGGTTCCTGGGTGTCAGACACTAACTGCTTGAGCCTCCCTTATAACTaGGATTACAAGCACATGTGC | + |
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Preference number: 2 (lower is better) Translates to: NTDSLISIGSWVSDTNCLSLPYN*DYKHMC Trigger: GCACATGTGCTTGTAATCTCAGTTATAAGGGAGGCT...CAAGCAGTTAGTGTCTGACACCCAGGAACCTATAGAAATGAGGGAATCTGTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000206595.11 |
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| 3UTR-3UTR TCA 90 bp | AACACAGATTCCCTCATTTCTATAGGTTCCTGGGTGTCAGACACTAACTGCTTGTCAGAACTTGAAAACTaGGTCTCTTCAAGACAATCC | + |
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Preference number: 2 (lower is better) Translates to: NTDSLISIGSWVSDTNCLSELEN*VSSRQS Trigger: GGATTGTCTTGAAGAGACTCAGTTTTCAAGTTCTGA...CAAGCAGTTAGTGTCTGACACCCAGGAACCTATAGAAATGAGGGAATCTGTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000206595.11 |
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| 3UTR-3UTR CCA 90 bp | AACACAGATTCCCTCATTTCTATAGGTTCCTGGGTGTCAGACACTAACTGCTTGAGGATCTCTCAAATGTaGAGAGTAAAGGAATCTTGT | + |
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Preference number: 2 (lower is better) Translates to: NTDSLISIGSWVSDTNCLRISQM*RVKESC Trigger: ACAAGATTCCTTTACTCTCCACATTTGAGAGATCCT...CAAGCAGTTAGTGTCTGACACCCAGGAACCTATAGAAATGAGGGAATCTGTGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000206595.11 |
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| 3UTR-3UTR CCA 90 bp | AACACAGATTCCCTCATTTCTATAGGTTCCTGGGTGTCAGACACTAACTGCTTGAAATGTCACGCTTTTTaGTTAATCTGGCAGTCTTTA | + |
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Preference number: 2 (lower is better) Translates to: NTDSLISIGSWVSDTNCLKCHAF*LIWQSL Trigger: TAAAGACTGCCAGATTAACCAAAAAGCGTGACATTT...CAAGCAGTTAGTGTCTGACACCCAGGAACCTATAGAAATGAGGGAATCTGTGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000206595.11 |
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| 3UTR-3UTR CAA 90 bp | AACACAGATTCCCTCATTTCTATAGGTTCCTGGGTGTCAGACACTAACTGCTTGGAGAGTAAAGGAATCTaGTATCTTTCAGTTTCGTCA | + |
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Preference number: 3 (lower is better) Translates to: NTDSLISIGSWVSDTNCLESKGI*YLSVSS Trigger: TGACGAAACTGAAAGATACAAGATTCCTTTACTCTC...CAAGCAGTTAGTGTCTGACACCCAGGAACCTATAGAAATGAGGGAATCTGTGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000206595.11 |
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| 3UTR CCA 72 bp | AGTTTTAACACAGATTCCCTCATTTCTATAGGTTCCTaGGTGTCAGACACTAACTGCTTGCTTATAGGATCT | + |
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Preference number: 3 (lower is better) Translates to: SFNTDSLISIGS*VSDTNCLLIGS Trigger: AGATCCTATAAGCAAGCAGTTAGTGTCTGACACCCAGGAACCTATAGAAATGAGGGAATCTGTGTTAAAACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000206595.11 |
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| CDS-3UTR GCA 90 bp | AACACAGATTCCCTCATTTCTATAGGTTCCTGGGTGTCAGACACTAACTGCTTGAGTCTCGCCCTTCTTTaGAACGACATCTTCGAACAT | + |
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Preference number: 4 (lower is better) Translates to: NTDSLISIGSWVSDTNCLSLALL*NDIFEH Trigger: ATGTTCGAAGATGTCGTTGCAAAGAAGGGCGAGACT...CAAGCAGTTAGTGTCTGACACCCAGGAACCTATAGAAATGAGGGAATCTGTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000206595.11 |
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| CDS-3UTR TCA 90 bp | AACACAGATTCCCTCATTTCTATAGGTTCCTGGGTGTCAGACACTAACTGCTTGCCCGCATTTATTGCTTaGACCTGTAAACAGTCTCTA | + |
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Preference number: 4 (lower is better) Translates to: NTDSLISIGSWVSDTNCLPAFIA*TCKQSL Trigger: TAGAGACTGTTTACAGGTTCAAGCAATAAATGCGGG...CAAGCAGTTAGTGTCTGACACCCAGGAACCTATAGAAATGAGGGAATCTGTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000206595.11 |
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| CDS-3UTR GCA 90 bp | AACACAGATTCCCTCATTTCTATAGGTTCCTGGGTGTCAGACACTAACTGCTTGGTGTCAGACACTAACTaGTTGCTTATAGGATCTCTC | + |
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Preference number: 4 (lower is better) Translates to: NTDSLISIGSWVSDTNCLVSDTN*LLIGSL Trigger: GAGAGATCCTATAAGCAAGCAGTTAGTGTCTGACAC...CAAGCAGTTAGTGTCTGACACCCAGGAACCTATAGAAATGAGGGAATCTGTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000206595.11 |
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| CDS-3UTR CCA 90 bp | AACACAGATTCCCTCATTTCTATAGGTTCCTGGGTGTCAGACACTAACTGCTTGATTTCTATAGGTTCCTaGGTGTCAGACACTAACTGC | + |
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Preference number: 4 (lower is better) Translates to: NTDSLISIGSWVSDTNCLISIGS*VSDTNC Trigger: GCAGTTAGTGTCTGACACCCAGGAACCTATAGAAAT...CAAGCAGTTAGTGTCTGACACCCAGGAACCTATAGAAATGAGGGAATCTGTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000206595.11 |
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| CDS-3UTR TCA 90 bp | AACACAGATTCCCTCATTTCTATAGGTTCCTGGGTGTCAGACACTAACTGCTTGATGGTCCCAACAAAATaGCGCAAAATTGCCAGTAAA | + |
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Preference number: 4 (lower is better) Translates to: NTDSLISIGSWVSDTNCLMVPTK*RKIASK Trigger: TTTACTGGCAATTTTGCGTCATTTTGTTGGGACCAT...CAAGCAGTTAGTGTCTGACACCCAGGAACCTATAGAAATGAGGGAATCTGTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000206595.11 |
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| CDS-3UTR GCA 90 bp | AACACAGATTCCCTCATTTCTATAGGTTCCTGGGTGTCAGACACTAACTGCTTGATTCCAAGCAAATGGTaGATGGTAAGGACTCTCTAT | + |
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Preference number: 4 (lower is better) Translates to: NTDSLISIGSWVSDTNCLIPSKW*MVRTLY Trigger: ATAGAGAGTCCTTACCATGCACCATTTGCTTGGAAT...CAAGCAGTTAGTGTCTGACACCCAGGAACCTATAGAAATGAGGGAATCTGTGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000206595.11 |
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| CDS-3UTR GCA 90 bp | AACACAGATTCCCTCATTTCTATAGGTTCCTGGGTGTCAGACACTAACTGCTTGCTAAATTTGCTGCCTTaGCTCAGTAGATCTTTACTC | + |
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Preference number: 4 (lower is better) Translates to: NTDSLISIGSWVSDTNCLLNLLP*LSRSLL Trigger: GAGTAAAGATCTACTGAGGCAAGGCAGCAAATTTAG...CAAGCAGTTAGTGTCTGACACCCAGGAACCTATAGAAATGAGGGAATCTGTGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000206595.11 |
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| CDS-3UTR TCA 90 bp | AACACAGATTCCCTCATTTCTATAGGTTCCTGGGTGTCAGACACTAACTGCTTGTTCTCTTTCAGAGCTTaGGAATTTAGAGACAAGTTC | + |
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Preference number: 4 (lower is better) Translates to: NTDSLISIGSWVSDTNCLFSFRA*EFRDKF Trigger: GAACTTGTCTCTAAATTCTCAAGCTCTGAAAGAGAA...CAAGCAGTTAGTGTCTGACACCCAGGAACCTATAGAAATGAGGGAATCTGTGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000206595.11 |
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| CDS-3UTR GCA 90 bp | AACACAGATTCCCTCATTTCTATAGGTTCCTGGGTGTCAGACACTAACTGCTTGGCTTTATTTCCCATTTaGTATCAGGTGCATTATAGT | + |
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Preference number: 4 (lower is better) Translates to: NTDSLISIGSWVSDTNCLALFPI*YQVHYS Trigger: ACTATAATGCACCTGATAGCAAATGGGAAATAAAGC...CAAGCAGTTAGTGTCTGACACCCAGGAACCTATAGAAATGAGGGAATCTGTGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000206595.11 |
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| CDS-3UTR GCA 90 bp | AACACAGATTCCCTCATTTCTATAGGTTCCTGGGTGTCAGACACTAACTGCTTGGTCAGCTACAGTTGTTaGAGTATTTATCCTGATTAT | + |
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Preference number: 4 (lower is better) Translates to: NTDSLISIGSWVSDTNCLVSYSC*SIYPDY Trigger: ATAATCAGGATAAATACTGCAACAACTGTAGCTGAC...CAAGCAGTTAGTGTCTGACACCCAGGAACCTATAGAAATGAGGGAATCTGTGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000206595.11 |
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| CDS CCA 90 bp | CGGGGGACCGGCAGGGCCTCCGAATCCTCAACACTGAGAGCTGGCTaGCGTGCGCAACCGTCGAGAGCGCTGGTCCAGCAAACGCCCCCA | + |
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Preference number: 5 (lower is better) Translates to: RGTGRASESSTLRAG*RAQPSRALVQQTPP Trigger: TGGGGGCGTTTGCTGGACCAGCGCTCTCGACGGTTGCGCACGCCAGCCAGCTCTCAGTGTTGAGGATTCGGAGGCCCTGCCGGTCCCCCG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000553504.5 |
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| CDS GCA 90 bp | GACCGGCAGGGCCTCCGAATCCTCAACACTGAGAGCTGGCTGGCGTaGGCAACCGTCGAGAGCGCTGGTCCAGCAAACGCCCCCAGTGCC | + |
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Preference number: 5 (lower is better) Translates to: DRQGLRILNTESWLA*ATVESAGPANAPSA Trigger: GGCACTGGGGGCGTTTGCTGGACCAGCGCTCTCGACGGTTGCGCACGCCAGCCAGCTCTCAGTGTTGAGGATTCGGAGGCCCTGCCGGTC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000553504.5 |
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| CDS TCA 90 bp | AGGTTTACTCGCGGGGGACCGGCAGGGCCTCCGAATCCTCAACACTaGGAGCTGGCTGGCGTGCGCAACCGTCGAGAGCGCTGGTCCAGC | + |
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Preference number: 5 (lower is better) Translates to: RFTRGGPAGPPNPQH*ELAGVRNRRERWSS Trigger: GCTGGACCAGCGCTCTCGACGGTTGCGCACGCCAGCCAGCTCTCAGTGTTGAGGATTCGGAGGCCCTGCCGGTCCCCCGCGAGTAAACCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000553504.5 |
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| CDS GCA 90 bp | ATTTCAAAGACTGTCACTTCCCTGCAGTCCAGAGTTAATCAAGGTTaGCCGGGTATCTCTCTCAGGAGGAACGCGGAGCCACGTAGAGCA | + |
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Preference number: 5 (lower is better) Translates to: ISKTVTSLQSRVNQG*PGISLRRNAEPRRA Trigger: TGCTCTACGTGGCTCCGCGTTCCTCCTGAGAGAGATACCCGGGCAACCTTGATTAACTCTGGACTGCAGGGAAGTGACAGTCTTTGAAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553504.5 |
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| CDS GCA 90 bp | TTCAGTTTAAATCCCACTCAGGCATTTCAAAGACTGTCACTTCCCTaGAGTCCAGAGTTAATCAAGGTTGCCCGGGTATCTCTCTCAGGA | + |
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Preference number: 5 (lower is better) Translates to: FSLNPTQAFQRLSLP*SPELIKVARVSLSG Trigger: TCCTGAGAGAGATACCCGGGCAACCTTGATTAACTCTGGACTGCAGGGAAGTGACAGTCTTTGAAATGCCTGAGTGGGATTTAAACTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553504.5 |
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| CDS TCA 90 bp | AGTGGATTACTTCCAAAAAGACTCCATAATAACCCAGTTGGCCAATaGATGAGGGAGGCGAAAAGGCAGGGCGGTGGAACTAAACCTTAT | + |
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Preference number: 5 (lower is better) Translates to: SGLLPKRLHNNPVGQ*MREAKRQGGGTKPY Trigger: ATAAGGTTTAGTTCCACCGCCCTGCCTTTTCGCCTCCCTCATTCATTGGCCAACTGGGTTATTATGGAGTCTTTTTGGAAGTAATCCACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000553504.5 |
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| CDS-3UTR CAA 90 bp | AACACAGATTCCCTCATTTCTATAGGTTCCTGGGTGTCAGACACTAACTGCTTGTCAGACACTAACTGCTaGCTTATAGGATCTCTCAAA | + |
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Preference number: 5 (lower is better) Translates to: NTDSLISIGSWVSDTNCLSDTNC*LIGSLK Trigger: TTTGAGAGATCCTATAAGCAAGCAGTTAGTGTCTGA...CAAGCAGTTAGTGTCTGACACCCAGGAACCTATAGAAATGAGGGAATCTGTGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000206595.11 |
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| CDS TCA 90 bp | CTTTCATTAAAAGAGATTTGTTTAAACGTGGCAACGCCTTCACAGTaGGATTTAACTACTGTTAAAATTTCAGCATTCGAGCCGAATTGG | + |
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Preference number: 5 (lower is better) Translates to: LSLKEICLNVATPSQ*DLTTVKISAFEPNW Trigger: CCAATTCGGCTCGAATGCTGAAATTTTAACAGTAGTTAAATCTCACTGTGAAGGCGTTGCCACGTTTAAACAAATCTCTTTTAATGAAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000553504.5 |
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| CDS TCA 72 bp | CGCGGGGGACCGGCAGGGCCTCCGAATCCTCAACACTaGGAGCTGGCTGGCGTGCGCAACCGTCGAGAGCGC | + |
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Preference number: 6 (lower is better) Translates to: RGGPAGPPNPQH*ELAGVRNRRER Trigger: GCGCTCTCGACGGTTGCGCACGCCAGCCAGCTCTCAGTGTTGAGGATTCGGAGGCCCTGCCGGTCCCCCGCG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000553504.5 |
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| CDS CCA 72 bp | GACCGGCAGGGCCTCCGAATCCTCAACACTGAGAGCTaGCTGGCGTGCGCAACCGTCGAGAGCGCTGGTCCA | + |
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Preference number: 6 (lower is better) Translates to: DRQGLRILNTES*LACATVESAGP Trigger: TGGACCAGCGCTCTCGACGGTTGCGCACGCCAGCCAGCTCTCAGTGTTGAGGATTCGGAGGCCCTGCCGGTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553504.5 |
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| CDS GCA 72 bp | GGCCTCCGAATCCTCAACACTGAGAGCTGGCTGGCGTaGGCAACCGTCGAGAGCGCTGGTCCAGCAAACGCC | + |
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Preference number: 6 (lower is better) Translates to: GLRILNTESWLA*ATVESAGPANA Trigger: GGCGTTTGCTGGACCAGCGCTCTCGACGGTTGCGCACGCCAGCCAGCTCTCAGTGTTGAGGATTCGGAGGCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553504.5 |
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| CDS CCA 72 bp | GGCAGGGCCTCCGAATCCTCAACACTGAGAGCTGGCTaGCGTGCGCAACCGTCGAGAGCGCTGGTCCAGCAA | + |
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Preference number: 6 (lower is better) Translates to: GRASESSTLRAG*RAQPSRALVQQ Trigger: TTGCTGGACCAGCGCTCTCGACGGTTGCGCACGCCAGCCAGCTCTCAGTGTTGAGGATTCGGAGGCCCTGCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553504.5 |
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| CDS TCA 72 bp | CTTCCAAAAAGACTCCATAATAACCCAGTTGGCCAATaGATGAGGGAGGCGAAAAGGCAGGGCGGTGGAACT | + |
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Preference number: 6 (lower is better) Translates to: LPKRLHNNPVGQ*MREAKRQGGGT Trigger: AGTTCCACCGCCCTGCCTTTTCGCCTCCCTCATTCATTGGCCAACTGGGTTATTATGGAGTCTTTTTGGAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000553504.5 |
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| CDS CAA 90 bp | GAGGCGAAAAGGCAGGGCGGTGGAACTAAACCTTATCCCTATTGTTaGCAAACTAAGACCCTAGTTAATCACCACCGCTGTTACCACAGC | + |
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Preference number: 6 (lower is better) Translates to: EAKRQGGGTKPYPYC*QTKTLVNHHRCYHS Trigger: GCTGTGGTAACAGCGGTGGTGATTAACTAGGGTCTTAGTTTGCAAACAATAGGGATAAGGTTTAGTTCCACCGCCCTGCCTTTTCGCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000553504.5 |
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| CDS GCA 72 bp | AATCCCACTCAGGCATTTCAAAGACTGTCACTTCCCTaGAGTCCAGAGTTAATCAAGGTTGCCCGGGTATCT | + |
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Preference number: 6 (lower is better) Translates to: NPTQAFQRLSLP*SPELIKVARVS Trigger: AGATACCCGGGCAACCTTGATTAACTCTGGACTGCAGGGAAGTGACAGTCTTTGAAATGCCTGAGTGGGATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553504.5 |
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| CDS CAA 72 bp | AGGCAGGGCGGTGGAACTAAACCTTATCCCTATTGTTaGCAAACTAAGACCCTAGTTAATCACCACCGCTGT | + |
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Preference number: 6 (lower is better) Translates to: RQGGGTKPYPYC*QTKTLVNHHRC Trigger: ACAGCGGTGGTGATTAACTAGGGTCTTAGTTTGCAAACAATAGGGATAAGGTTTAGTTCCACCGCCCTGCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553504.5 |
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| CDS CAA 72 bp | TTAGATTCATGCTCACCTTTCTCCCACGGTTCTTCCTaGTGCCCTAGAACCTCTGTTTTTACCATTAACTCT | + |
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Preference number: 6 (lower is better) Translates to: LDSCSPFSHGSS*CPRTSVFTINS Trigger: AGAGTTAATGGTAAAAACAGAGGTTCTAGGGCACAAGGAAGAACCGTGGGAGAAAGGTGAGCATGAATCTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000552488.1 |
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| CDS TCA 72 bp | AGGAAGAATGGGGGTGCTGGAATAGCCAGCACTGGATaGAGGAATGTTTTTATTCTGATTATTATGAAGTCC | + |
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Preference number: 6 (lower is better) Translates to: RKNGGAGIASTG*RNVFILIIMKS Trigger: GGACTTCATAATAATCAGAATAAAAACATTCCTTCATCCAGTGCTGGCTATTCCAGCACCCCCATTCTTCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000553504.5 |
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| CDS CAA 72 bp | GTTACCACAGCCGGTTTAAATAGGAGTCTCGGATTTTaGCGGTACATGAAAAATGTCAACCGTGAAAGAAAA | + |
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Preference number: 6 (lower is better) Translates to: VTTAGLNRSLGF*RYMKNVNRERK Trigger: TTTTCTTTCACGGTTGACATTTTTCATGTACCGCAAAAATCCGAGACTCCTATTTAAACCGGCTGTGGTAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000553504.5 |
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| CDS CAA 90 bp | TTGTGCCCTAGAACCTCTGTTTTTACCATTAACTCTCCTACCTTCTaGATATCTTCAAAAATAATTGCCTCCACTTCTTTGCCTCAACTA | + |
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Preference number: 6 (lower is better) Translates to: LCPRTSVFTINSPTF*ISSKIIASTSLPQL Trigger: TAGTTGAGGCAAAGAAGTGGAGGCAATTATTTTTGAAGATATCAAGAAGGTAGGAGAGTTAATGGTAAAAACAGAGGTTCTAGGGCACAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000552488.1 |
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| CDS GCA 72 bp | TCATTTTACTTTCAGTTAAATATGCAGACTGTTCAATaGCATCCTCCAGACCTACTGATTCAGAATCTGAGA | + |
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Preference number: 6 (lower is better) Translates to: SFYFQLNMQTVQ*HPPDLLIQNLR Trigger: TCTCAGATTCTGAATCAGTAGGTCTGGAGGATGGCATTGAACAGTCTGCATATTTAACTGAAAGTAAAATGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000553504.5 |
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| CDS CAA 72 bp | AGAACCTCTGTTTTTACCATTAACTCTCCTACCTTCTaGATATCTTCAAAAATAATTGCCTCCACTTCTTTG | + |
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Preference number: 6 (lower is better) Translates to: RTSVFTINSPTF*ISSKIIASTSL Trigger: CAAAGAAGTGGAGGCAATTATTTTTGAAGATATCAAGAAGGTAGGAGAGTTAATGGTAAAAACAGAGGTTCT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000552488.1 |
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