RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FZR1 (Homo sapiens)

Ensembl gene IDs: ENSG00000105325

Ensembl transcript IDs: ENST00000313639.8, ENST00000395095.7, ENST00000441788.7, ENST00000586212.1, ENST00000588084.1, ENST00000588327.1, ENST00000591290.5, ENST00000592214.1, ENST00000652521.1

Found 778 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCGCAGGGACTTGCCTGGAGTCCAGTCCTTGGCCCTGCAGGATTGTaGCCGGCGCCCTGGCAGACGGGCCTGGGAGGCGTCTCTGCGGCC +
Preference number: 1 (lower is better)
Translates to: AQGLAWSPVLGPAGL*PAPWQTGLGGVSAA
Trigger: GGCCGCAGAGACGCCTCCCAGGCCCGTCTGCCAGGGCGCCGGCCACAATCCTGCAGGGCCAAGGACTGGACTCCAGGCAAGTCCCTGCGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441788.7
3UTR CCA 90 bp GGGCCGTCCAGCTGGAGCGCAGGGACTTGCCTGGAGTCCAGTCCTTaGCCCTGCAGGATTGTGGCCGGCGCCCTGGCAGACGGGCCTGGG +
Preference number: 1 (lower is better)
Translates to: GPSSWSAGTCLESSP*PCRIVAGALADGPG
Trigger: CCCAGGCCCGTCTGCCAGGGCGCCGGCCACAATCCTGCAGGGCCAAGGACTGGACTCCAGGCAAGTCCCTGCGCTCCAGCTGGACGGCCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441788.7
3UTR GCA 90 bp TCCAGCTGGAGCGCAGGGACTTGCCTGGAGTCCAGTCCTTGGCCCTaGAGGATTGTGGCCGGCGCCCTGGCAGACGGGCCTGGGAGGCGT +
Preference number: 1 (lower is better)
Translates to: SSWSAGTCLESSPWP*RIVAGALADGPGRR
Trigger: ACGCCTCCCAGGCCCGTCTGCCAGGGCGCCGGCCACAATCCTGCAGGGCCAAGGACTGGACTCCAGGCAAGTCCCTGCGCTCCAGCTGGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441788.7
3UTR GCA 90 bp CTGGCCTTCGTCTGCCTGTCGGGTGGAGCTGACAGCAGAGGCACCTaGCCCAGCGCTGCTGAGTGGCCCCCGTGCCCCGCAAAGCCTGAC +
Preference number: 1 (lower is better)
Translates to: LAFVCLSGGADSRGT*PSAAEWPPCPAKPD
Trigger: GTCAGGCTTTGCGGGGCACGGGGGCCACTCAGCAGCGCTGGGGCAGGTGCCTCTGCTGTCAGCTCCACCCGACAGGCAGACGAAGGCCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441788.7
3UTR CCA 90 bp TCCTTGGCCCTGCAGGATTGTGGCCGGCGCCCTGGCAGACGGGCCTaGGAGGCGTCTCTGCGGCCTTCGAGGGCTGAGCTCCCCATCTGT +
Preference number: 1 (lower is better)
Translates to: SLALQDCGRRPGRRA*EASLRPSRAELPIC
Trigger: ACAGATGGGGAGCTCAGCCCTCGAAGGCCGCAGAGACGCCTCCCAGGCCCGTCTGCCAGGGCGCCGGCCACAATCCTGCAGGGCCAAGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441788.7
3UTR GCA 90 bp CACCTCCTCCCTGGAACAGGGCCGTCCAGCTGGAGCGCAGGGACTTaGCTGGAGTCCAGTCCTTGGCCCTGCAGGATTGTGGCCGGCGCC +
Preference number: 1 (lower is better)
Translates to: HLLPGTGPSSWSAGT*LESSPWPCRIVAGA
Trigger: GGCGCCGGCCACAATCCTGCAGGGCCAAGGACTGGACTCCAGGCAAGTCCCTGCGCTCCAGCTGGACGGCCCTGTTCCAGGGAGGAGGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441788.7
3UTR CCA 90 bp CCACACCGCTGCTGGCCTCCACAGGACCCAGCCACCCAGCAGGCATaGGGGACGCAAGTCTTGCGCAGGGAAGGAGGACGCTGGCCCTGT +
Preference number: 1 (lower is better)
Translates to: PHRCWPPQDPATQQA*GTQVLRREGGRWPC
Trigger: ACAGGGCCAGCGTCCTCCTTCCCTGCGCAAGACTTGCGTCCCCCATGCCTGCTGGGTGGCTGGGTCCTGTGGAGGCCAGCAGCGGTGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
3UTR CCA 90 bp CTGAGCCAGCCAAGCCCTGACGCCCACAGCGACAAGGCGGCTCTTTaGCAACTGCGGGCAGGGGCGGGCATGGGCGAAGGCAGGGTTGGT +
Preference number: 1 (lower is better)
Translates to: LSQPSPDAHSDKAAL*QLRAGAGMGEGRVG
Trigger: ACCAACCCTGCCTTCGCCCATGCCCGCCCCTGCCCGCAGTTGCCAAAGAGCCGCCTTGTCGCTGTGGGCGTCAGGGCTTGGCTGGCTCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441788.7
3UTR CCA 90 bp TCCTCCCTGGAACAGGGCCGTCCAGCTGGAGCGCAGGGACTTGCCTaGAGTCCAGTCCTTGGCCCTGCAGGATTGTGGCCGGCGCCCTGG +
Preference number: 1 (lower is better)
Translates to: SSLEQGRPAGAQGLA*SPVLGPAGLWPAPW
Trigger: CCAGGGCGCCGGCCACAATCCTGCAGGGCCAAGGACTGGACTCCAGGCAAGTCCCTGCGCTCCAGCTGGACGGCCCTGTTCCAGGGAGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441788.7
3UTR GCA 90 bp GGCAGAACCAGCCCCAACACAAACCTCACGCCGTCCGCCTGGCCCTaGGGCGGTTCCCAGTCCCAGGAGGAGCCTCTGAAGGCCACTGTG +
Preference number: 1 (lower is better)
Translates to: GRTSPNTNLTPSAWP*GGSQSQEEPLKATV
Trigger: CACAGTGGCCTTCAGAGGCTCCTCCTGGGACTGGGAACCGCCGCAGGGCCAGGCGGACGGCGTGAGGTTTGTGTTGGGGCTGGTTCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441788.7
3UTR CCA 90 bp GATGCCGTGAAGCCCAGGTGGGGACTGTCTCTTGGATCCACAGGCTaGCTCCGCCAGTGGCCCCGAGCCACCTGCCCAGGCCTACATGCC +
Preference number: 1 (lower is better)
Translates to: DAVKPRWGLSLGSTG*LRQWPRATCPGLHA
Trigger: GGCATGTAGGCCTGGGCAGGTGGCTCGGGGCCACTGGCGGAGCCAGCCTGTGGATCCAAGAGACAGTCCCCACCTGGGCTTCACGGCATC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
3UTR CCA 90 bp AGGTGGCTGCAAGGATGCCGTGAAGCCCAGGTGGGGACTGTCTCTTaGATCCACAGGCTGGCTCCGCCAGTGGCCCCGAGCCACCTGCCC +
Preference number: 1 (lower is better)
Translates to: RWLQGCREAQVGTVS*IHRLAPPVAPSHLP
Trigger: GGGCAGGTGGCTCGGGGCCACTGGCGGAGCCAGCCTGTGGATCCAAGAGACAGTCCCCACCTGGGCTTCACGGCATCCTTGCAGCCACCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
3UTR GCA 90 bp TCTCTTGGATCCACAGGCTGGCTCCGCCAGTGGCCCCGAGCCACCTaGCCAGGCCTACATGCCTTGGTCTGGCCTTGGGGCTGGTCTTGG +
Preference number: 1 (lower is better)
Translates to: SLGSTGWLRQWPRAT*PGLHALVWPWGWSW
Trigger: CCAAGACCAGCCCCAAGGCCAGACCAAGGCATGTAGGCCTGGGCAGGTGGCTCGGGGCCACTGGCGGAGCCAGCCTGTGGATCCAAGAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
3UTR CCA 90 bp GGGAAGCTTCTCGAAGGATGGAGGGCGCCCACCTCCTGGACCCCTTaGGTCTCCTTGGCTTCCCCACGGCTGTTGGCGCTGGTGGACAGG +
Preference number: 1 (lower is better)
Translates to: GKLLEGWRAPTSWTP*VSLASPRLLALVDR
Trigger: CCTGTCCACCAGCGCCAACAGCCGTGGGGAAGCCAAGGAGACCCAAGGGGTCCAGGAGGTGGGCGCCCTCCATCCTTCGAGAAGCTTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
3UTR CCA 90 bp GAGGAGCCTGGGAAGCTTCTCGAAGGATGGAGGGCGCCCACCTCCTaGACCCCTTGGGTCTCCTTGGCTTCCCCACGGCTGTTGGCGCTG +
Preference number: 1 (lower is better)
Translates to: EEPGKLLEGWRAPTS*TPWVSLASPRLLAL
Trigger: CAGCGCCAACAGCCGTGGGGAAGCCAAGGAGACCCAAGGGGTCCAGGAGGTGGGCGCCCTCCATCCTTCGAGAAGCTTCCCAGGCTCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
3UTR CCA 90 bp TGCCCACCCTCCCTCCCTGATGGTGTCAACCGAGCACCTCCTCCCTaGAACAGGGCCGTCCAGCTGGAGCGCAGGGACTTGCCTGGAGTC +
Preference number: 1 (lower is better)
Translates to: CPPSLPDGVNRAPPP*NRAVQLERRDLPGV
Trigger: GACTCCAGGCAAGTCCCTGCGCTCCAGCTGGACGGCCCTGTTCCAGGGAGGAGGTGCTCGGTTGACACCATCAGGGAGGGAGGGTGGGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441788.7
3UTR CCA 90 bp TCTCCCAACCACTGCCAGGGTCGCCCCAGGAAGCGATGGCCCCACTaGCCTTCGTCTGCCTGTCGGGTGGAGCTGACAGCAGAGGCACCT +
Preference number: 1 (lower is better)
Translates to: SPNHCQGRPRKRWPH*PSSACRVELTAEAP
Trigger: AGGTGCCTCTGCTGTCAGCTCCACCCGACAGGCAGACGAAGGCCAGTGGGGCCATCGCTTCCTGGGGCGACCCTGGCAGTGGTTGGGAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441788.7
3UTR CCA 90 bp ATCTGGGCGTCTCCCAACCACTGCCAGGGTCGCCCCAGGAAGCGATaGCCCCACTGGCCTTCGTCTGCCTGTCGGGTGGAGCTGACAGCA +
Preference number: 1 (lower is better)
Translates to: IWASPNHCQGRPRKR*PHWPSSACRVELTA
Trigger: TGCTGTCAGCTCCACCCGACAGGCAGACGAAGGCCAGTGGGGCCATCGCTTCCTGGGGCGACCCTGGCAGTGGTTGGGAGACGCCCAGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441788.7
3UTR TCA 90 bp CCTTCCTCGGGGGACAAGCGCTGGGAAGGCAGAGTCCATGCAAGCTaGGGAGCTGGGGTCCTCCGACTCTGGACAGCTGGTGTGGCACGG +
Preference number: 1 (lower is better)
Translates to: PSSGDKRWEGRVHAS*GAGVLRLWTAGVAR
Trigger: CCGTGCCACACCAGCTGTCCAGAGTCGGAGGACCCCAGCTCCTCAGCTTGCATGGACTCTGCCTTCCCAGCGCTTGTCCCCCGAGGAAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
3UTR TCA 90 bp GCCTCTGAAGGCCACTGTGGGTTGTGCACTGAGCCAGCCAAGCCCTaGCGCCCACAGCGACAAGGCGGCTCTTTGGCAACTGCGGGCAGG +
Preference number: 1 (lower is better)
Translates to: ASEGHCGLCTEPAKP*RPQRQGGSLATAGR
Trigger: CCTGCCCGCAGTTGCCAAAGAGCCGCCTTGTCGCTGTGGGCGTCAGGGCTTGGCTGGCTCAGTGCACAACCCACAGTGGCCTTCAGAGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441788.7
3UTR GCA 90 bp CCAGCCGCCTTCCTCGGGGGACAAGCGCTGGGAAGGCAGAGTCCATaGAAGCTGAGGAGCTGGGGTCCTCCGACTCTGGACAGCTGGTGT +
Preference number: 1 (lower is better)
Translates to: PAAFLGGQALGRQSP*KLRSWGPPTLDSWC
Trigger: ACACCAGCTGTCCAGAGTCGGAGGACCCCAGCTCCTCAGCTTGCATGGACTCTGCCTTCCCAGCGCTTGTCCCCCGAGGAAGGCGGCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
3UTR GCA 90 bp CTCAGGCCCCCACCAATCAGCCCTGGCGTCTGGTGGTCTGTTCTGTaGAGACGTGGGCAGTTCCAGGAAGAGCATGCGGCTCCGGTGGGC +
Preference number: 1 (lower is better)
Translates to: LRPPPISPGVWWSVL*RRGQFQEEHAAPVG
Trigger: GCCCACCGGAGCCGCATGCTCTTCCTGGAACTGCCCACGTCTGCACAGAACAGACCACCAGACGCCAGGGCTGATTGGTGGGGGCCTGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
3UTR CCA 90 bp TCGAAGGATGGAGGGCGCCCACCTCCTGGACCCCTTGGGTCTCCTTaGCTTCCCCACGGCTGTTGGCGCTGGTGGACAGGACAGGTGAAG +
Preference number: 1 (lower is better)
Translates to: SKDGGRPPPGPLGSP*LPHGCWRWWTGQVK
Trigger: CTTCACCTGTCCTGTCCACCAGCGCCAACAGCCGTGGGGAAGCCAAGGAGACCCAAGGGGTCCAGGAGGTGGGCGCCCTCCATCCTTCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
3UTR CCA 90 bp ATGGTGTCAACCGAGCACCTCCTCCCTGGAACAGGGCCGTCCAGCTaGAGCGCAGGGACTTGCCTGGAGTCCAGTCCTTGGCCCTGCAGG +
Preference number: 1 (lower is better)
Translates to: MVSTEHLLPGTGPSS*SAGTCLESSPWPCR
Trigger: CCTGCAGGGCCAAGGACTGGACTCCAGGCAAGTCCCTGCGCTCCAGCTGGACGGCCCTGTTCCAGGGAGGAGGTGCTCGGTTGACACCAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441788.7
3UTR GCA 90 bp GTCTCCGCTTCCCCTGCCCTTGTCAGGTCCCCACAGATACGACCCTaGCTTTCCCATCTGGACACGCACCCAGGAGCTCCACTCCCTCGG +
Preference number: 1 (lower is better)
Translates to: VSASPALVRSPQIRP*LSHLDTHPGAPLPR
Trigger: CCGAGGGAGTGGAGCTCCTGGGTGCGTGTCCAGATGGGAAAGGCAGGGTCGTATCTGTGGGGACCTGACAAGGGCAGGGGAAGCGGAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441788.7
3UTR CCA 90 bp GGCAACCGGGGTCTCAGGCCCCCACCAATCAGCCCTGGCGTCTGGTaGTCTGTTCTGTGCAGACGTGGGCAGTTCCAGGAAGAGCATGCG +
Preference number: 1 (lower is better)
Translates to: GNRGLRPPPISPGVW*SVLCRRGQFQEEHA
Trigger: CGCATGCTCTTCCTGGAACTGCCCACGTCTGCACAGAACAGACCACCAGACGCCAGGGCTGATTGGTGGGGGCCTGAGACCCCGGTTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
3UTR CCA 90 bp CAGCAGGCATGGGGGACGCAAGTCTTGCGCAGGGAAGGAGGACGCTaGCCCTGTGAGGGCACGTGTTGGCGAATGCACGAAGACGTGGCA +
Preference number: 1 (lower is better)
Translates to: QQAWGTQVLRREGGR*PCEGTCWRMHEDVA
Trigger: TGCCACGTCTTCGTGCATTCGCCAACACGTGCCCTCACAGGGCCAGCGTCCTCCTTCCCTGCGCAAGACTTGCGTCCCCCATGCCTGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
3UTR CCA 90 bp CCTGCTGTGCAGCCTGGGAGCATGAGACAGAGAAGCAGAGGAGCCTaGGAAGCTTCTCGAAGGATGGAGGGCGCCCACCTCCTGGACCCC +
Preference number: 1 (lower is better)
Translates to: PAVQPGSMRQRSRGA*EASRRMEGAHLLDP
Trigger: GGGGTCCAGGAGGTGGGCGCCCTCCATCCTTCGAGAAGCTTCCCAGGCTCCTCTGCTTCTCTGTCTCATGCTCCCAGGCTGCACAGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
3UTR GCA 90 bp GCAGGGAAGGAGGACGCTGGCCCTGTGAGGGCACGTGTTGGCGAATaGACGAAGACGTGGCATCTGTTGTGCTCCTCTCCAGCCAGGGCA +
Preference number: 1 (lower is better)
Translates to: AGKEDAGPVRARVGE*TKTWHLLCSSPARA
Trigger: TGCCCTGGCTGGAGAGGAGCACAACAGATGCCACGTCTTCGTGCATTCGCCAACACGTGCCCTCACAGGGCCAGCGTCCTCCTTCCCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
3UTR GCA 90 bp AGGCGTCTCTGCGGCCTTCGAGGGCTGAGCTCCCCATCTGTGAAATaGAGGCCTGGGAAGCCCCTCAGAAGCTGCTTCTGCAGCTCCAGG +
Preference number: 1 (lower is better)
Translates to: RRLCGLRGLSSPSVK*RPGKPLRSCFCSSR
Trigger: CCTGGAGCTGCAGAAGCAGCTTCTGAGGGGCTTCCCAGGCCTGCATTTCACAGATGGGGAGCTCAGCCCTCGAAGGCCGCAGAGACGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441788.7
3UTR GCA 90 bp GGGCCTTTGCATGGCTGTGCCCTTTGCCTCTCACCCAGGCGTCCCTaGCTTCTCCAGCCCTGGCTGAAATGCCAGGCTTGTGGTGAGCCT +
Preference number: 1 (lower is better)
Translates to: GPLHGCALCLSPRRP*LLQPWLKCQACGEP
Trigger: AGGCTCACCACAAGCCTGGCATTTCAGCCAGGGCTGGAGAAGGCAGGGACGCCTGGGTGAGAGGCAAAGGGCACAGCCATGCAAAGGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441788.7
3UTR CCA 90 bp CCCACCAATCAGCCCTGGCGTCTGGTGGTCTGTTCTGTGCAGACGTaGGCAGTTCCAGGAAGAGCATGCGGCTCCGGTGGGCAGGTGATG +
Preference number: 1 (lower is better)
Translates to: PTNQPWRLVVCSVQT*AVPGRACGSGGQVM
Trigger: CATCACCTGCCCACCGGAGCCGCATGCTCTTCCTGGAACTGCCCACGTCTGCACAGAACAGACCACCAGACGCCAGGGCTGATTGGTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
3UTR CCA 90 bp GCCATGAATGGGCAACCGGGGTCTCAGGCCCCCACCAATCAGCCCTaGCGTCTGGTGGTCTGTTCTGTGCAGACGTGGGCAGTTCCAGGA +
Preference number: 1 (lower is better)
Translates to: AMNGQPGSQAPTNQP*RLVVCSVQTWAVPG
Trigger: TCCTGGAACTGCCCACGTCTGCACAGAACAGACCACCAGACGCCAGGGCTGATTGGTGGGGGCCTGAGACCCCGGTTGCCCATTCATGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
3UTR CCA 90 bp GACGCTGGCCCTGTGAGGGCACGTGTTGGCGAATGCACGAAGACGTaGCATCTGTTGTGCTCCTCTCCAGCCAGGGCAGTGAGCAGGTCC +
Preference number: 1 (lower is better)
Translates to: DAGPVRARVGECTKT*HLLCSSPARAVSRS
Trigger: GGACCTGCTCACTGCCCTGGCTGGAGAGGAGCACAACAGATGCCACGTCTTCGTGCATTCGCCAACACGTGCCCTCACAGGGCCAGCGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
3UTR CCA 90 bp CTGCCCTTGTCAGGTCCCCACAGATACGACCCTGCCTTTCCCATCTaGACACGCACCCAGGAGCTCCACTCCCTCGGCGTAGGTGCCCAA +
Preference number: 1 (lower is better)
Translates to: LPLSGPHRYDPAFPI*TRTQELHSLGVGAQ
Trigger: TTGGGCACCTACGCCGAGGGAGTGGAGCTCCTGGGTGCGTGTCCAGATGGGAAAGGCAGGGTCGTATCTGTGGGGACCTGACAAGGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441788.7
3UTR TCA 90 bp GAGGGTGACGCTTGGCCAGGATGCACAGGCCCATCTGAAGCCCACTaGCCGCCGGGCGATGGCCATGACACAGATGCTTCCAGAGAGACT +
Preference number: 1 (lower is better)
Translates to: EGDAWPGCTGPSEAH*PPGDGHDTDASRET
Trigger: AGTCTCTCTGGAAGCATCTGTGTCATGGCCATCGCCCGGCGGTCAGTGGGCTTCAGATGGGCCTGTGCATCCTGGCCAAGCGTCACCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
3UTR GCA 90 bp CCAGGTCTGCTCGGTTTCATCATCTCCAATGCCCAGGATGGGGCCTaGCCCAGCTCCTTCACCCTCTTCTCAGGCACCGCGCAAGAGCGA +
Preference number: 1 (lower is better)
Translates to: PGLLGFIISNAQDGA*PSSFTLFSGTAQER
Trigger: TCGCTCTTGCGCGGTGCCTGAGAAGAGGGTGAAGGAGCTGGGGCAGGCCCCATCCTGGGCATTGGAGATGATGAAACCGAGCAGACCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441788.7
3UTR GCA 90 bp GCCAGCTCCACATGGGCCAGGTCTGCTCGGTTTCATCATCTCCAATaGCCAGGATGGGGCCTGCCCCAGCTCCTTCACCCTCTTCTCAGG +
Preference number: 1 (lower is better)
Translates to: ASSTWARSARFHHLQ*PGWGLPQLLHPLLR
Trigger: CCTGAGAAGAGGGTGAAGGAGCTGGGGCAGGCCCCATCCTGGGCATTGGAGATGATGAAACCGAGCAGACCTGGCCCATGTGGAGCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441788.7
3UTR CCA 90 bp ATGGGCAACCGGGGTCTCAGGCCCCCACCAATCAGCCCTGGCGTCTaGTGGTCTGTTCTGTGCAGACGTGGGCAGTTCCAGGAAGAGCAT +
Preference number: 1 (lower is better)
Translates to: MGNRGLRPPPISPGV*WSVLCRRGQFQEEH
Trigger: ATGCTCTTCCTGGAACTGCCCACGTCTGCACAGAACAGACCACCAGACGCCAGGGCTGATTGGTGGGGGCCTGAGACCCCGGTTGCCCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
3UTR CCA 90 bp GTCTTGCGCAGGGAAGGAGGACGCTGGCCCTGTGAGGGCACGTGTTaGCGAATGCACGAAGACGTGGCATCTGTTGTGCTCCTCTCCAGC +
Preference number: 1 (lower is better)
Translates to: VLRREGGRWPCEGTC*RMHEDVASVVLLSS
Trigger: GCTGGAGAGGAGCACAACAGATGCCACGTCTTCGTGCATTCGCCAACACGTGCCCTCACAGGGCCAGCGTCCTCCTTCCCTGCGCAAGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
3UTR TCA 90 bp ATGGGGGACGCAAGTCTTGCGCAGGGAAGGAGGACGCTGGCCCTGTaGGGGCACGTGTTGGCGAATGCACGAAGACGTGGCATCTGTTGT +
Preference number: 1 (lower is better)
Translates to: MGDASLAQGRRTLAL*GHVLANARRRGICC
Trigger: ACAACAGATGCCACGTCTTCGTGCATTCGCCAACACGTGCCCTCACAGGGCCAGCGTCCTCCTTCCCTGCGCAAGACTTGCGTCCCCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
3UTR GCA 90 bp GCTTCCAGAGAGACTGCTGCTTCGAGCAGTGACAGCAGAGGTGGCTaGAAGGATGCCGTGAAGCCCAGGTGGGGACTGTCTCTTGGATCC +
Preference number: 1 (lower is better)
Translates to: ASRETAASSSDSRGG*KDAVKPRWGLSLGS
Trigger: GGATCCAAGAGACAGTCCCCACCTGGGCTTCACGGCATCCTTGCAGCCACCTCTGCTGTCACTGCTCGAAGCAGCAGTCTCTCTGGAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
3UTR GCA 90 bp GTGAGGGCACGTGTTGGCGAATGCACGAAGACGTGGCATCTGTTGTaGTCCTCTCCAGCCAGGGCAGTGAGCAGGTCCGGGTTCAGTTCT +
Preference number: 1 (lower is better)
Translates to: VRARVGECTKTWHLL*SSPARAVSRSGFSS
Trigger: AGAACTGAACCCGGACCTGCTCACTGCCCTGGCTGGAGAGGAGCACAACAGATGCCACGTCTTCGTGCATTCGCCAACACGTGCCCTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
3UTR CCA 90 bp CTCCTCTCCAGCCAGGGCAGTGAGCAGGTCCGGGTTCAGTTCTCCTaGGGTGATAAGTCCAGAGCAGACATCCTCCTCCAGTGTGAGGGT +
Preference number: 1 (lower is better)
Translates to: LLSSQGSEQVRVQFS*GDKSRADILLQCEG
Trigger: ACCCTCACACTGGAGGAGGATGTCTGCTCTGGACTTATCACCCCAGGAGAACTGAACCCGGACCTGCTCACTGCCCTGGCTGGAGAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
3UTR CCA 90 bp CCTTGTGACGCCACCTCCTCACTTCCTCATAAGCTTCTCTGTCTCTaGGCTGTGTCCCCCATGCCAGCTCCACATGGGCCAGGTCTGCTC +
Preference number: 1 (lower is better)
Translates to: PCDATSSLPHKLLCL*AVSPMPAPHGPGLL
Trigger: GAGCAGACCTGGCCCATGTGGAGCTGGCATGGGGGACACAGCCCAGAGACAGAGAAGCTTATGAGGAAGTGAGGAGGTGGCGTCACAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441788.7
3UTR CCA 90 bp GCTGAGGGTCCCCGACCACGTGCCCACCCCAGATACTGGTGGACATaGTTCACAATCAGGCATTTAATGAGACTCCAGGATCCTCCAGGC +
Preference number: 1 (lower is better)
Translates to: AEGPRPRAHPRYWWT*FTIRHLMRLQDPPG
Trigger: GCCTGGAGGATCCTGGAGTCTCATTAAATGCCTGATTGTGAACCATGTCCACCAGTATCTGGGGTGGGCACGTGGTCGGGGACCCTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
3UTR TCA 90 bp CCCACCCGAGCCGGGGACCTAGAGCCAGCCAGTCCCGGCCACACATaGATCCACGTGTTTAATGACAGCGTCACTGCATTACATGAGAAA +
Preference number: 1 (lower is better)
Translates to: PTRAGDLEPASPGHT*IHVFNDSVTALHEK
Trigger: TTTCTCATGTAATGCAGTGACGCTGTCATTAAACACGTGGATTCATGTGTGGCCGGGACTGGCTGGCTCTAGGTCCCCGGCTCGGGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441788.7
3UTR CCA 90 bp CCTGCTGCTGAGGGTCCCCGACCACGTGCCCACCCCAGATACTGGTaGACATGGTTCACAATCAGGCATTTAATGAGACTCCAGGATCCT +
Preference number: 1 (lower is better)
Translates to: PAAEGPRPRAHPRYW*TWFTIRHLMRLQDP
Trigger: AGGATCCTGGAGTCTCATTAAATGCCTGATTGTGAACCATGTCCACCAGTATCTGGGGTGGGCACGTGGTCGGGGACCCTCAGCAGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
3UTR CCA 90 bp CACGTGTTTAATGACAGCGTCACTGCATTACATGAGAAACAAGGCTaGTCTGTCCTGGGAGCTCCCCCACCCCCTAGCATGGGCAGAACC +
Preference number: 1 (lower is better)
Translates to: HVFNDSVTALHEKQG*SVLGAPPPPSMGRT
Trigger: GGTTCTGCCCATGCTAGGGGGTGGGGGAGCTCCCAGGACAGACCAGCCTTGTTTCTCATGTAATGCAGTGACGCTGTCATTAAACACGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000441788.7
3UTR-3UTR TCA 90 bp CTGGCAGACGGGCCTGGGAGGCGTCTCTGCGGCCTTCGAGGGCTGAGCTCCCCATGCACAGGCGCACAGTaGGGGGTCCGCGCCCCACCC +
Preference number: 2 (lower is better)
Translates to: LADGPGRRLCGLRGLSSPCTGAQ*GVRAPP
Trigger: GGGTGGGGCGCGGACCCCTCACTGTGCGCCTGTGCA...TGGGGAGCTCAGCCCTCGAAGGCCGCAGAGACGCCTCCCAGGCCCGTCTGCCAG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000441788.7
3UTR CAA 90 bp GGAGCGCAGGGACTTGCCTGGAGTCCAGTCCTTGGCCCTGCAGGATaGTGGCCGGCGCCCTGGCAGACGGGCCTGGGAGGCGTCTCTGCG +
Preference number: 2 (lower is better)
Translates to: GAQGLAWSPVLGPAG*WPAPWQTGLGGVSA
Trigger: CGCAGAGACGCCTCCCAGGCCCGTCTGCCAGGGCGCCGGCCACAATCCTGCAGGGCCAAGGACTGGACTCCAGGCAAGTCCCTGCGCTCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441788.7
3UTR CAA 90 bp AGGGCCGTCCAGCTGGAGCGCAGGGACTTGCCTGGAGTCCAGTCCTaGGCCCTGCAGGATTGTGGCCGGCGCCCTGGCAGACGGGCCTGG +
Preference number: 2 (lower is better)
Translates to: RAVQLERRDLPGVQS*ALQDCGRRPGRRAW
Trigger: CCAGGCCCGTCTGCCAGGGCGCCGGCCACAATCCTGCAGGGCCAAGGACTGGACTCCAGGCAAGTCCCTGCGCTCCAGCTGGACGGCCCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441788.7
3UTR-3UTR TCA 90 bp TTGTGGCCGGCGCCCTGGCAGACGGGCCTGGGAGGCGTCTCTGCGGCCTTCGAGCCACGTCCCCACCGATaGAATGGGAAGGGGTGGTGG +
Preference number: 2 (lower is better)
Translates to: LWPAPWQTGLGGVSAAFEPRPHR*NGKGWW
Trigger: CCACCACCCCTTCCCATTTCATCGGTGGGGACGTGG...CTCGAAGGCCGCAGAGACGCCTCCCAGGCCCGTCTGCCAGGGCGCCGGCCACAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441788.7
3UTR CAA 90 bp GCACCTCCTCCCTGGAACAGGGCCGTCCAGCTGGAGCGCAGGGACTaGCCTGGAGTCCAGTCCTTGGCCCTGCAGGATTGTGGCCGGCGC +
Preference number: 2 (lower is better)
Translates to: APPPWNRAVQLERRD*PGVQSLALQDCGRR
Trigger: GCGCCGGCCACAATCCTGCAGGGCCAAGGACTGGACTCCAGGCAAGTCCCTGCGCTCCAGCTGGACGGCCCTGTTCCAGGGAGGAGGTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441788.7
3UTR-3UTR CCA 90 bp TTGTGGCCGGCGCCCTGGCAGACGGGCCTGGGAGGCGTCTCTGCGGCCTTCGAGAAGCTTCTCGAAGGATaGAGGGCGCCCACCTCCTGG +
Preference number: 2 (lower is better)
Translates to: LWPAPWQTGLGGVSAAFEKLLEG*RAPTSW
Trigger: CCAGGAGGTGGGCGCCCTCCATCCTTCGAGAAGCTT...CTCGAAGGCCGCAGAGACGCCTCCCAGGCCCGTCTGCCAGGGCGCCGGCCACAA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441788.7
3UTR-3UTR CCA 90 bp AGCACCTCCTCCCTGGAACAGGGCCGTCCAGCTGGAGCGCAGGGACTTGCCTGGGGGCAGGGGCGGGCATaGGCGAAGGCAGGGTTGGTT +
Preference number: 2 (lower is better)
Translates to: STSSLEQGRPAGAQGLAWGQGRA*AKAGLV
Trigger: AACCAACCCTGCCTTCGCCCATGCCCGCCCCTGCCC...CCAGGCAAGTCCCTGCGCTCCAGCTGGACGGCCCTGTTCCAGGGAGGAGGTGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441788.7
3UTR-3UTR CCA 90 bp CTGGCAGACGGGCCTGGGAGGCGTCTCTGCGGCCTTCGAGGGCTGAGCTCCCCACACGGCTGTTGGCGCTaGTGGACAGGACAGGTGAAG +
Preference number: 2 (lower is better)
Translates to: LADGPGRRLCGLRGLSSPHGCWR*WTGQVK
Trigger: CTTCACCTGTCCTGTCCACCAGCGCCAACAGCCGTG...TGGGGAGCTCAGCCCTCGAAGGCCGCAGAGACGCCTCCCAGGCCCGTCTGCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441788.7
3UTR-3UTR CCA 90 bp TTGTGGCCGGCGCCCTGGCAGACGGGCCTGGGAGGCGTCTCTGCGGCCTTCGAGGCCTGCTGTGCAGCCTaGGAGCATGAGACAGAGAAG +
Preference number: 2 (lower is better)
Translates to: LWPAPWQTGLGGVSAAFEACCAA*EHETEK
Trigger: CTTCTCTGTCTCATGCTCCCAGGCTGCACAGCAGGC...CTCGAAGGCCGCAGAGACGCCTCCCAGGCCCGTCTGCCAGGGCGCCGGCCACAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441788.7
3UTR-3UTR GCA 90 bp GCCATGAATGGGCAACCGGGGTCTCAGGCCCCCACCAATCAGCCCTGGCGTCTGGGGTCCCCGACCACGTaGCCACCCCAGATACTGGTG +
Preference number: 2 (lower is better)
Translates to: AMNGQPGSQAPTNQPWRLGSPTT*PPQILV
Trigger: CACCAGTATCTGGGGTGGGCACGTGGTCGGGGACCC...CAGACGCCAGGGCTGATTGGTGGGGGCCTGAGACCCCGGTTGCCCATTCATGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
3UTR-3UTR GCA 90 bp TGGGGACTGTCTCTTGGATCCACAGGCTGGCTCCGCCAGTGGCCCCGAGCCACCGTTCCAGGAAGAGCATaGGGCTCCGGTGGGCAGGTG +
Preference number: 2 (lower is better)
Translates to: WGLSLGSTGWLRQWPRATVPGRA*GSGGQV
Trigger: CACCTGCCCACCGGAGCCGCATGCTCTTCCTGGAAC...GGTGGCTCGGGGCCACTGGCGGAGCCAGCCTGTGGATCCAAGAGACAGTCCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
3UTR-3UTR GCA 90 bp GAGGAGCCTGGGAAGCTTCTCGAAGGATGGAGGGCGCCCACCTCCTGGACCCCTTGGCCCCGAGCCACCTaGCCAGGCCTACATGCCTTG +
Preference number: 2 (lower is better)
Translates to: EEPGKLLEGWRAPTSWTPWPRAT*PGLHAL
Trigger: CAAGGCATGTAGGCCTGGGCAGGTGGCTCGGGGCCA...AGGGGTCCAGGAGGTGGGCGCCCTCCATCCTTCGAGAAGCTTCCCAGGCTCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
3UTR CAA 90 bp CTCGAAGGATGGAGGGCGCCCACCTCCTGGACCCCTTGGGTCTCCTaGGCTTCCCCACGGCTGTTGGCGCTGGTGGACAGGACAGGTGAA +
Preference number: 2 (lower is better)
Translates to: LEGWRAPTSWTPWVS*ASPRLLALVDRTGE
Trigger: TTCACCTGTCCTGTCCACCAGCGCCAACAGCCGTGGGGAAGCCAAGGAGACCCAAGGGGTCCAGGAGGTGGGCGCCCTCCATCCTTCGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
3UTR CAA 90 bp TGGGAAGCTTCTCGAAGGATGGAGGGCGCCCACCTCCTGGACCCCTaGGGTCTCCTTGGCTTCCCCACGGCTGTTGGCGCTGGTGGACAG +
Preference number: 2 (lower is better)
Translates to: WEASRRMEGAHLLDP*GLLGFPTAVGAGGQ
Trigger: CTGTCCACCAGCGCCAACAGCCGTGGGGAAGCCAAGGAGACCCAAGGGGTCCAGGAGGTGGGCGCCCTCCATCCTTCGAGAAGCTTCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
3UTR-3UTR TCA 90 bp CCAGCCACCCAGCAGGCATGGGGGACGCAAGTCTTGCGCAGGGAAGGAGGACGCAGAGTCCATGCAAGCTaGGGAGCTGGGGTCCTCCGA +
Preference number: 2 (lower is better)
Translates to: PATQQAWGTQVLRREGGRRVHAS*GAGVLR
Trigger: TCGGAGGACCCCAGCTCCTCAGCTTGCATGGACTCT...GCGTCCTCCTTCCCTGCGCAAGACTTGCGTCCCCCATGCCTGCTGGGTGGCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
3UTR-3UTR TCA 90 bp CTCCTGGACCCCTTGGGTCTCCTTGGCTTCCCCACGGCTGTTGGCGCTGGTGGAGCTGCAAGGATGCCGTaGAGCCCAGGTGGGGACTGT +
Preference number: 2 (lower is better)
Translates to: LLDPLGLLGFPTAVGAGGAARMP*SPGGDC
Trigger: ACAGTCCCCACCTGGGCTTCACGGCATCCTTGCAGC...TCCACCAGCGCCAACAGCCGTGGGGAAGCCAAGGAGACCCAAGGGGTCCAGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
3UTR-3UTR CCA 90 bp CCAGCCACCCAGCAGGCATGGGGGACGCAAGTCTTGCGCAGGGAAGGAGGACGCTGCAAGCTGAGGAGCTaGGGTCCTCCGACTCTGGAC +
Preference number: 2 (lower is better)
Translates to: PATQQAWGTQVLRREGGRCKLRS*GPPTLD
Trigger: GTCCAGAGTCGGAGGACCCCAGCTCCTCAGCTTGCA...GCGTCCTCCTTCCCTGCGCAAGACTTGCGTCCCCCATGCCTGCTGGGTGGCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
3UTR-3UTR CCA 90 bp TGGGGACTGTCTCTTGGATCCACAGGCTGGCTCCGCCAGTGGCCCCGAGCCACCAGCATGCGGCTCCGGTaGGCAGGTGATGAACAGACG +
Preference number: 2 (lower is better)
Translates to: WGLSLGSTGWLRQWPRATSMRLR*AGDEQT
Trigger: CGTCTGTTCATCACCTGCCCACCGGAGCCGCATGCT...GGTGGCTCGGGGCCACTGGCGGAGCCAGCCTGTGGATCCAAGAGACAGTCCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
3UTR-3UTR CCA 90 bp TGCAGGATTGTGGCCGGCGCCCTGGCAGACGGGCCTGGGAGGCGTCTCTGCGGCTTGGGTTTGACATGGTaGGGTGCAGCCATGAATGGG +
Preference number: 2 (lower is better)
Translates to: CRIVAGALADGPGRRLCGLGLTW*GAAMNG
Trigger: CCCATTCATGGCTGCACCCCACCATGTCAAACCCAA...GCCGCAGAGACGCCTCCCAGGCCCGTCTGCCAGGGCGCCGGCCACAATCCTGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441788.7
3UTR-3UTR CCA 90 bp CCAGCCACCCAGCAGGCATGGGGGACGCAAGTCTTGCGCAGGGAAGGAGGACGCGCCGTGAAGCCCAGGTaGGGACTGTCTCTTGGATCC +
Preference number: 2 (lower is better)
Translates to: PATQQAWGTQVLRREGGRAVKPR*GLSLGS
Trigger: GGATCCAAGAGACAGTCCCCACCTGGGCTTCACGGC...GCGTCCTCCTTCCCTGCGCAAGACTTGCGTCCCCCATGCCTGCTGGGTGGCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
3UTR-3UTR GCA 90 bp GAAGACGTGGCATCTGTTGTGCTCCTCTCCAGCCAGGGCAGTGAGCAGGTCCGGTGGCCCCGAGCCACCTaGCCAGGCCTACATGCCTTG +
Preference number: 2 (lower is better)
Translates to: EDVASVVLLSSQGSEQVRWPRAT*PGLHAL
Trigger: CAAGGCATGTAGGCCTGGGCAGGTGGCTCGGGGCCA...CCGGACCTGCTCACTGCCCTGGCTGGAGAGGAGCACAACAGATGCCACGTCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
3UTR-3UTR GCA 90 bp TCCTGGGCCATGGGGAACCAATTCCCCCATTTCTACACGAGCCCTGGCCCATCACGGGGGCCACACCGCTaGTGGCCTCCACAGGACCCA +
Preference number: 2 (lower is better)
Translates to: SWAMGNQFPHFYTSPGPSRGPHR*WPPQDP
Trigger: TGGGTCCTGTGGAGGCCAGCAGCGGTGTGGCCCCCG...TGATGGGCCAGGGCTCGTGTAGAAATGGGGGAATTGGTTCCCCATGGCCCAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000441788.7
3UTR-3UTR CCA 90 bp TCAGGCCCCCACCAATCAGCCCTGGCGTCTGGTGGTCTGTTCTGTGCAGACGTGCCGACTCTGGACAGCTaGTGTGGCACGGTCCTGCCC +
Preference number: 2 (lower is better)
Translates to: SGPHQSALASGGLFCADVPTLDS*CGTVLP
Trigger: GGGCAGGACCGTGCCACACCAGCTGTCCAGAGTCGG...CACGTCTGCACAGAACAGACCACCAGACGCCAGGGCTGATTGGTGGGGGCCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
3UTR-3UTR CCA 90 bp CATGGGGGACGCAAGTCTTGCGCAGGGAAGGAGGACGCTGGCCCTGTGAGGGCAGTGGTTCTCGCCCTTTaGGAAGGGAGACAGAGCCCC +
Preference number: 2 (lower is better)
Translates to: HGGRKSCAGKEDAGPVRAVVLAL*EGRQSP
Trigger: GGGGCTCTGTCTCCCTTCCCAAAGGGCGAGAACCAC...TGCCCTCACAGGGCCAGCGTCCTCCTTCCCTGCGCAAGACTTGCGTCCCCCATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
3UTR-3UTR CCA 90 bp CATGGGGGACGCAAGTCTTGCGCAGGGAAGGAGGACGCTGGCCCTGTGAGGGCATGTGAGGGTGACGCTTaGCCAGGATGCACAGGCCCA +
Preference number: 2 (lower is better)
Translates to: HGGRKSCAGKEDAGPVRACEGDA*PGCTGP
Trigger: TGGGCCTGTGCATCCTGGCCAAGCGTCACCCTCACA...TGCCCTCACAGGGCCAGCGTCCTCCTTCCCTGCGCAAGACTTGCGTCCCCCATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
3UTR-3UTR CCA 90 bp CAGCCTGGGAGCATGAGACAGAGAAGCAGAGGAGCCTGGGAAGCTTCTCGAAGGAAGACACAGGCAGCCTaGGGGCGGGGGCCACACCGC +
Preference number: 2 (lower is better)
Translates to: QPGSMRQRSRGAWEASRRKTQAA*GRGPHR
Trigger: GCGGTGTGGCCCCCGCCCCCAGGCTGCCTGTGTCTT...CCTTCGAGAAGCTTCCCAGGCTCCTCTGCTTCTCTGTCTCATGCTCCCAGGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
3UTR-3UTR CCA 90 bp GCCTACATGCCTTGGTCTGGCCTTGGGGCTGGTCTTGGGTTTGACATGGTGGGGTCTGGACAGCTGGTGTaGCACGGTCCTGCCCGGCAG +
Preference number: 2 (lower is better)
Translates to: AYMPWSGLGAGLGFDMVGSGQLV*HGPARQ
Trigger: CTGCCGGGCAGGACCGTGCCACACCAGCTGTCCAGA...CCCCACCATGTCAAACCCAAGACCAGCCCCAAGGCCAGACCAAGGCATGTAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
3UTR-3UTR CCA 90 bp GGCATCCGTCGCTCTGAGTACAGACGGTCTGAGCCGGGACCGTCCAATGTGGTTCCGACTCTGGACAGCTaGTGTGGCACGGTCCTGCCC +
Preference number: 2 (lower is better)
Translates to: GIRRSEYRRSEPGPSNVVPTLDS*CGTVLP
Trigger: GGGCAGGACCGTGCCACACCAGCTGTCCAGAGTCGG...AACCACATTGGACGGTCCCGGCTCAGACCGTCTGTACTCAGAGCGACGGATGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
3UTR-3UTR CCA 90 bp CATGGGGGACGCAAGTCTTGCGCAGGGAAGGAGGACGCTGGCCCTGTGAGGGCACGGGACCGTCCAATGTaGTTCTCGCCCTTTGGGAAG +
Preference number: 2 (lower is better)
Translates to: HGGRKSCAGKEDAGPVRARDRPM*FSPFGK
Trigger: CTTCCCAAAGGGCGAGAACCACATTGGACGGTCCCG...TGCCCTCACAGGGCCAGCGTCCTCCTTCCCTGCGCAAGACTTGCGTCCCCCATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
3UTR-3UTR CCA 90 bp CTGGCAGACGGGCCTGGGAGGCGTCTCTGCGGCCTTCGAGGGCTGAGCTCCCCAGAATGCACGAAGACGTaGCATCTGTTGTGCTCCTCT +
Preference number: 2 (lower is better)
Translates to: LADGPGRRLCGLRGLSSPECTKT*HLLCSS
Trigger: AGAGGAGCACAACAGATGCCACGTCTTCGTGCATTC...TGGGGAGCTCAGCCCTCGAAGGCCGCAGAGACGCCTCCCAGGCCCGTCTGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441788.7
3UTR-3UTR TCA 90 bp CATAAGCTTCTCTGTCTCTGGGCTGTGTCCCCCATGCCAGCTCCACATGGGCCACCCACCCTCCCTCCCTaGTGGTGTCAACCGAGCACC +
Preference number: 2 (lower is better)
Translates to: HKLLCLWAVSPMPAPHGPPTLPP*WCQPST
Trigger: GGTGCTCGGTTGACACCATCAGGGAGGGAGGGTGGG...TGGCCCATGTGGAGCTGGCATGGGGGACACAGCCCAGAGACAGAGAAGCTTATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441788.7
3UTR-3UTR GCA 90 bp GGGGTGATAAGTCCAGAGCAGACATCCTCCTCCAGTGTGAGGGTGACGCTTGGCGGGTCCCCGACCACGTaGCCACCCCAGATACTGGTG +
Preference number: 2 (lower is better)
Translates to: GVISPEQTSSSSVRVTLGGSPTT*PPQILV
Trigger: CACCAGTATCTGGGGTGGGCACGTGGTCGGGGACCC...GCCAAGCGTCACCCTCACACTGGAGGAGGATGTCTGCTCTGGACTTATCACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
3UTR-3UTR CCA 90 bp CGCCCCACCCAGACAGAGGTGGGGAGAGTCTCTCCAGTGAATGTGGAAGATCGAGGGGTCCTCCGACTCTaGACAGCTGGTGTGGCACGG +
Preference number: 2 (lower is better)
Translates to: RPTQTEVGRVSPVNVEDRGVLRL*TAGVAR
Trigger: CCGTGCCACACCAGCTGTCCAGAGTCGGAGGACCCC...TCGATCTTCCACATTCACTGGAGAGACTCTCCCCACCTCTGTCTGGGTGGGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000441788.7
3UTR-3UTR CCA 90 bp GAAGACGTGGCATCTGTTGTGCTCCTCTCCAGCCAGGGCAGTGAGCAGGTCCGGGCCGTGAAGCCCAGGTaGGGACTGTCTCTTGGATCC +
Preference number: 2 (lower is better)
Translates to: EDVASVVLLSSQGSEQVRAVKPR*GLSLGS
Trigger: GGATCCAAGAGACAGTCCCCACCTGGGCTTCACGGC...CCGGACCTGCTCACTGCCCTGGCTGGAGAGGAGCACAACAGATGCCACGTCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
3UTR CAA 90 bp CCTGTGAGGGCACGTGTTGGCGAATGCACGAAGACGTGGCATCTGTaGTGCTCCTCTCCAGCCAGGGCAGTGAGCAGGTCCGGGTTCAGT +
Preference number: 2 (lower is better)
Translates to: PVRARVGECTKTWHL*CSSPARAVSRSGFS
Trigger: ACTGAACCCGGACCTGCTCACTGCCCTGGCTGGAGAGGAGCACAACAGATGCCACGTCTTCGTGCATTCGCCAACACGTGCCCTCACAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
3UTR-3UTR TCA 90 bp GATGCTTCCAGAGAGACTGCTGCTTCGAGCAGTGACAGCAGAGGTGGCTGCAAGGGTGGGGTGCAGCCATaGATGGGCAACCGGGGTCTC +
Preference number: 2 (lower is better)
Translates to: DASRETAASSSDSRGGCKGGVQP*MGNRGL
Trigger: GAGACCCCGGTTGCCCATTCATGGCTGCACCCCACC...CTTGCAGCCACCTCTGCTGTCACTGCTCGAAGCAGCAGTCTCTCTGGAAGCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
3UTR-3UTR TCA 90 bp TCCTGGGCCATGGGGAACCAATTCCCCCATTTCTACACGAGCCCTGGCCCATCAGCTGCAAGGATGCCGTaGAGCCCAGGTGGGGACTGT +
Preference number: 2 (lower is better)
Translates to: SWAMGNQFPHFYTSPGPSAARMP*SPGGDC
Trigger: ACAGTCCCCACCTGGGCTTCACGGCATCCTTGCAGC...TGATGGGCCAGGGCTCGTGTAGAAATGGGGGAATTGGTTCCCCATGGCCCAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000441788.7
3UTR-3UTR GCA 90 bp TCCTGGGCCATGGGGAACCAATTCCCCCATTTCTACACGAGCCCTGGCCCATCAGTTCCAGGAAGAGCATaGGGCTCCGGTGGGCAGGTG +
Preference number: 2 (lower is better)
Translates to: SWAMGNQFPHFYTSPGPSVPGRA*GSGGQV
Trigger: CACCTGCCCACCGGAGCCGCATGCTCTTCCTGGAAC...TGATGGGCCAGGGCTCGTGTAGAAATGGGGGAATTGGTTCCCCATGGCCCAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441788.7
3UTR-3UTR GCA 90 bp AGCACCTCCTCCCTGGAACAGGGCCGTCCAGCTGGAGCGCAGGGACTTGCCTGGATACATATGTACACATaGACGCCAACCCCACTGGGG +
Preference number: 2 (lower is better)
Translates to: STSSLEQGRPAGAQGLAWIHMYT*TPTPLG
Trigger: CCCCAGTGGGGTTGGCGTGCATGTGTACATATGTAT...CCAGGCAAGTCCCTGCGCTCCAGCTGGACGGCCCTGTTCCAGGGAGGAGGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441788.7
3UTR-3UTR CCA 90 bp CGGGGTCTCAGGCCCCCACCAATCAGCCCTGGCGTCTGGTGGTCTGTTCTGTGCGCCCACCCCAGATACTaGTGGACATGGTTCACAATC +
Preference number: 2 (lower is better)
Translates to: RGLRPPPISPGVWWSVLCAHPRY*WTWFTI
Trigger: GATTGTGAACCATGTCCACCAGTATCTGGGGTGGGC...GCACAGAACAGACCACCAGACGCCAGGGCTGATTGGTGGGGGCCTGAGACCCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
3UTR-3UTR CCA 90 bp CGCAAGTCTTGCGCAGGGAAGGAGGACGCTGGCCCTGTGAGGGCACGTGTTGGCCGGGTTCAGTTCTCCTaGGGTGATAAGTCCAGAGCA +
Preference number: 2 (lower is better)
Translates to: RKSCAGKEDAGPVRARVGRVQFS*GDKSRA
Trigger: TGCTCTGGACTTATCACCCCAGGAGAACTGAACCCG...GCCAACACGTGCCCTCACAGGGCCAGCGTCCTCCTTCCCTGCGCAAGACTTGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
3UTR-3UTR TCA 90 bp ACATGCCTTGGTCTGGCCTTGGGGCTGGTCTTGGGTTTGACATGGTGGGGTGCAAGAGTCCATGCAAGCTaGGGAGCTGGGGTCCTCCGA +
Preference number: 2 (lower is better)
Translates to: TCLGLALGLVLGLTWWGARVHAS*GAGVLR
Trigger: TCGGAGGACCCCAGCTCCTCAGCTTGCATGGACTCT...TGCACCCCACCATGTCAAACCCAAGACCAGCCCCAAGGCCAGACCAAGGCATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
3UTR-3UTR TCA 90 bp CATAAGCTTCTCTGTCTCTGGGCTGTGTCCCCCATGCCAGCTCCACATGGGCCAGGCTGGTCTTGGGTTTaGCATGGTGGGGTGCAGCCA +
Preference number: 2 (lower is better)
Translates to: HKLLCLWAVSPMPAPHGPGWSWV*HGGVQP
Trigger: TGGCTGCACCCCACCATGTCAAACCCAAGACCAGCC...TGGCCCATGTGGAGCTGGCATGGGGGACACAGCCCAGAGACAGAGAAGCTTATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441788.7
3UTR-3UTR GCA 90 bp GTGAGCAGGTCCGGGTTCAGTTCTCCTGGGGTGATAAGTCCAGAGCAGACATCCAGGTGGCTGCAAGGATaGCGTGAAGCCCAGGTGGGG +
Preference number: 2 (lower is better)
Translates to: VSRSGFSSPGVISPEQTSRWLQG*REAQVG
Trigger: CCCCACCTGGGCTTCACGGCATCCTTGCAGCCACCT...GGATGTCTGCTCTGGACTTATCACCCCAGGAGAACTGAACCCGGACCTGCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
3UTR-3UTR CCA 90 bp CGCAAGTCTTGCGCAGGGAAGGAGGACGCTGGCCCTGTGAGGGCACGTGTTGGCCACCCCAGATACTGGTaGACATGGTTCACAATCAGG +
Preference number: 2 (lower is better)
Translates to: RKSCAGKEDAGPVRARVGHPRYW*TWFTIR
Trigger: CCTGATTGTGAACCATGTCCACCAGTATCTGGGGTG...GCCAACACGTGCCCTCACAGGGCCAGCGTCCTCCTTCCCTGCGCAAGACTTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
3UTR-3UTR CCA 90 bp GCCTACATGCCTTGGTCTGGCCTTGGGGCTGGTCTTGGGTTTGACATGGTGGGGAGCCCTGGCGTCTGGTaGTCTGTTCTGTGCAGACGT +
Preference number: 2 (lower is better)
Translates to: AYMPWSGLGAGLGFDMVGSPGVW*SVLCRR
Trigger: ACGTCTGCACAGAACAGACCACCAGACGCCAGGGCT...CCCCACCATGTCAAACCCAAGACCAGCCCCAAGGCCAGACCAAGGCATGTAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
3UTR-3UTR CCA 90 bp TCCTGGGCCATGGGGAACCAATTCCCCCATTTCTACACGAGCCCTGGCCCATCACTGGAGTCCAGTCCTTaGCCCTGCAGGATTGTGGCC +
Preference number: 2 (lower is better)
Translates to: SWAMGNQFPHFYTSPGPSLESSP*PCRIVA
Trigger: GGCCACAATCCTGCAGGGCCAAGGACTGGACTCCAG...TGATGGGCCAGGGCTCGTGTAGAAATGGGGGAATTGGTTCCCCATGGCCCAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441788.7
3UTR-3UTR CCA 90 bp CCGGATCCTGGTGAAGAGGTTGAGCACAGACACAGACTCCTTTGTCGAACGGGTAGTGCCCGGTCAGCTTaGCCACCTGGGTCAGGGAGG +
Preference number: 2 (lower is better)
Translates to: PDPGEEVEHRHRLLCRTGSARSA*PPGSGR
Trigger: CCTCCCTGACCCAGGTGGCCAAGCTGACCGGGCACT...ACCCGTTCGACAAAGGAGTCTGTGTCTGTGCTCAACCTCTTCACCAGGATCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591290.5
3UTR-3UTR TCA 90 bp GTGAGCAGGTCCGGGTTCAGTTCTCCTGGGGTGATAAGTCCAGAGCAGACATCCGGCTGGTCTTGGGTTTaGCATGGTGGGGTGCAGCCA +
Preference number: 2 (lower is better)
Translates to: VSRSGFSSPGVISPEQTSGWSWV*HGGVQP
Trigger: TGGCTGCACCCCACCATGTCAAACCCAAGACCAGCC...GGATGTCTGCTCTGGACTTATCACCCCAGGAGAACTGAACCCGGACCTGCTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
3UTR-3UTR CCA 90 bp CGCCCCACCCAGACAGAGGTGGGGAGAGTCTCTCCAGTGAATGTGGAAGATCGACCCACCAATCAGCCCTaGCGTCTGGTGGTCTGTTCT +
Preference number: 2 (lower is better)
Translates to: RPTQTEVGRVSPVNVEDRPTNQP*RLVVCS
Trigger: AGAACAGACCACCAGACGCCAGGGCTGATTGGTGGG...TCGATCTTCCACATTCACTGGAGAGACTCTCCCCACCTCTGTCTGGGTGGGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441788.7
3UTR-3UTR CCA 90 bp ACATGCCTTGGTCTGGCCTTGGGGCTGGTCTTGGGTTTGACATGGTGGGGTGCACCCACCAATCAGCCCTaGCGTCTGGTGGTCTGTTCT +
Preference number: 2 (lower is better)
Translates to: TCLGLALGLVLGLTWWGAPTNQP*RLVVCS
Trigger: AGAACAGACCACCAGACGCCAGGGCTGATTGGTGGG...TGCACCCCACCATGTCAAACCCAAGACCAGCCCCAAGGCCAGACCAAGGCATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
3UTR-3UTR CCA 90 bp CGCCCCACCCAGACAGAGGTGGGGAGAGTCTCTCCAGTGAATGTGGAAGATCGACTACATGCCTTGGTCTaGCCTTGGGGCTGGTCTTGG +
Preference number: 2 (lower is better)
Translates to: RPTQTEVGRVSPVNVEDRLHALV*PWGWSW
Trigger: CCAAGACCAGCCCCAAGGCCAGACCAAGGCATGTAG...TCGATCTTCCACATTCACTGGAGAGACTCTCCCCACCTCTGTCTGGGTGGGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000441788.7
3UTR-3UTR CCA 90 bp CAGCCTGGGAGCATGAGACAGAGAAGCAGAGGAGCCTGGGAAGCTTCTCGAAGGGGCTGTTGGCGCTGGTaGACAGGACAGGTGAAGACA +
Preference number: 2 (lower is better)
Translates to: QPGSMRQRSRGAWEASRRGCWRW*TGQVKT
Trigger: TGTCTTCACCTGTCCTGTCCACCAGCGCCAACAGCC...CCTTCGAGAAGCTTCCCAGGCTCCTCTGCTTCTCTGTCTCATGCTCCCAGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
3UTR-3UTR TCA 90 bp CATAAGCTTCTCTGTCTCTGGGCTGTGTCCCCCATGCCAGCTCCACATGGGCCAGGAGAGTCTCTCCAGTaGATGTGGAAGATCGACCCG +
Preference number: 2 (lower is better)
Translates to: HKLLCLWAVSPMPAPHGPGESLQ*MWKIDP
Trigger: CGGGTCGATCTTCCACATTCACTGGAGAGACTCTCC...TGGCCCATGTGGAGCTGGCATGGGGGACACAGCCCAGAGACAGAGAAGCTTATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441788.7
3UTR-3UTR GCA 90 bp TCAGCTGTCCTGGGCCATGGGGAACCAATTCCCCCATTTCTACACGAGCCCTGGTGGTGGTCTGTTCTGTaGAGACGTGGGCAGTTCCAG +
Preference number: 2 (lower is better)
Translates to: SAVLGHGEPIPPFLHEPWWWSVL*RRGQFQ
Trigger: CTGGAACTGCCCACGTCTGCACAGAACAGACCACCA...CCAGGGCTCGTGTAGAAATGGGGGAATTGGTTCCCCATGGCCCAGGACAGCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441788.7
3UTR-3UTR CCA 90 bp CTCAGGCCCCCACCAATCAGCCCTGGCGTCTGGTGGTCTGTTCTGTGCAGACGTCACCCCAGATACTGGTaGACATGGTTCACAATCAGG +
Preference number: 2 (lower is better)
Translates to: LRPPPISPGVWWSVLCRRHPRYW*TWFTIR
Trigger: CCTGATTGTGAACCATGTCCACCAGTATCTGGGGTG...ACGTCTGCACAGAACAGACCACCAGACGCCAGGGCTGATTGGTGGGGGCCTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
3UTR-3UTR CCA 90 bp CCTTGGCTTCCCCACGGCTGTTGGCGCTGGTGGACAGGACAGGTGAAGACACAGGTCTTGGGTTTGACATaGTGGGGTGCAGCCATGAAT +
Preference number: 2 (lower is better)
Translates to: PWLPHGCWRWWTGQVKTQVLGLT*WGAAMN
Trigger: ATTCATGGCTGCACCCCACCATGTCAAACCCAAGAC...CTGTGTCTTCACCTGTCCTGTCCACCAGCGCCAACAGCCGTGGGGAAGCCAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
3UTR-3UTR CCA 90 bp CCTTGGCTTCCCCACGGCTGTTGGCGCTGGTGGACAGGACAGGTGAAGACACAGGAATGCACGAAGACGTaGCATCTGTTGTGCTCCTCT +
Preference number: 2 (lower is better)
Translates to: PWLPHGCWRWWTGQVKTQECTKT*HLLCSS
Trigger: AGAGGAGCACAACAGATGCCACGTCTTCGTGCATTC...CTGTGTCTTCACCTGTCCTGTCCACCAGCGCCAACAGCCGTGGGGAAGCCAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
3UTR-3UTR CCA 90 bp CGAACGGGTTTTGCTAAAGACGTTCCAGAACCTCAGGGTCTCGTCTCCAGCACCGTCAGCTTGGCCACCTaGGTCAGGGAGGGGTACTTC +
Preference number: 2 (lower is better)
Translates to: RTGFAKDVPEPQGLVSSTVSLAT*VREGYF
Trigger: GAAGTACCCCTCCCTGACCCAGGTGGCCAAGCTGAC...GGTGCTGGAGACGAGACCCTGAGGTTCTGGAACGTCTTTAGCAAAACCCGTTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591290.5
3UTR-3UTR CCA 90 bp CAGCCTGGGAGCATGAGACAGAGAAGCAGAGGAGCCTGGGAAGCTTCTCGAAGGCGGGTTCAGTTCTCCTaGGGTGATAAGTCCAGAGCA +
Preference number: 2 (lower is better)
Translates to: QPGSMRQRSRGAWEASRRRVQFS*GDKSRA
Trigger: TGCTCTGGACTTATCACCCCAGGAGAACTGAACCCG...CCTTCGAGAAGCTTCCCAGGCTCCTCTGCTTCTCTGTCTCATGCTCCCAGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
3UTR-3UTR GCA 90 bp CATAAGCTTCTCTGTCTCTGGGCTGTGTCCCCCATGCCAGCTCCACATGGGCCACTCTTTCCCTCTCACTaGACCAGCTACATTCCAGGA +
Preference number: 2 (lower is better)
Translates to: HKLLCLWAVSPMPAPHGPLFPSH*TSYIPG
Trigger: TCCTGGAATGTAGCTGGTGCAGTGAGAGGGAAAGAG...TGGCCCATGTGGAGCTGGCATGGGGGACACAGCCCAGAGACAGAGAAGCTTATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441788.7
3UTR-3UTR CCA 90 bp GAGGAGCCTGGGAAGCTTCTCGAAGGATGGAGGGCGCCCACCTCCTGGACCCCTAGATACTGGTGGACATaGTTCACAATCAGGCATTTA +
Preference number: 2 (lower is better)
Translates to: EEPGKLLEGWRAPTSWTPRYWWT*FTIRHL
Trigger: TAAATGCCTGATTGTGAACCATGTCCACCAGTATCT...AGGGGTCCAGGAGGTGGGCGCCCTCCATCCTTCGAGAAGCTTCCCAGGCTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
3UTR-3UTR GCA 90 bp GACTCCTTTGTCGAACGGGTTTTGCTAAAGACGTTCCAGAACCTCAGGGTCTCGCCCATCAGGGGACATTaGCAGGTACAGCACGCGGTA +
Preference number: 2 (lower is better)
Translates to: DSFVERVLLKTFQNLRVSPIRGH*QVQHAV
Trigger: TACCGCGTGCTGTACCTGGCAATGTCCCCTGATGGG...CGAGACCCTGAGGTTCTGGAACGTCTTTAGCAAAACCCGTTCGACAAAGGAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591290.5
3UTR CCA 72 bp CTGCAGGATTGTGGCCGGCGCCCTGGCAGACGGGCCTaGGAGGCGTCTCTGCGGCCTTCGAGGGCTGAGCTC +
Preference number: 3 (lower is better)
Translates to: LQDCGRRPGRRA*EASLRPSRAEL
Trigger: GAGCTCAGCCCTCGAAGGCCGCAGAGACGCCTCCCAGGCCCGTCTGCCAGGGCGCCGGCCACAATCCTGCAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441788.7
3UTR CCA 72 bp CCAGTCCTTGGCCCTGCAGGATTGTGGCCGGCGCCCTaGCAGACGGGCCTGGGAGGCGTCTCTGCGGCCTTC +
Preference number: 3 (lower is better)
Translates to: PVLGPAGLWPAP*QTGLGGVSAAF
Trigger: GAAGGCCGCAGAGACGCCTCCCAGGCCCGTCTGCCAGGGCGCCGGCCACAATCCTGCAGGGCCAAGGACTGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441788.7
3UTR GCA 72 bp GCCGGCGCCCTGGCAGACGGGCCTGGGAGGCGTCTCTaGGGCCTTCGAGGGCTGAGCTCCCCATCTGTGAAA +
Preference number: 3 (lower is better)
Translates to: AGALADGPGRRL*GLRGLSSPSVK
Trigger: TTTCACAGATGGGGAGCTCAGCCCTCGAAGGCCGCAGAGACGCCTCCCAGGCCCGTCTGCCAGGGCGCCGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441788.7
3UTR CCA 72 bp CCAAGCCCTGACGCCCACAGCGACAAGGCGGCTCTTTaGCAACTGCGGGCAGGGGCGGGCATGGGCGAAGGC +
Preference number: 3 (lower is better)
Translates to: PSPDAHSDKAAL*QLRAGAGMGEG
Trigger: GCCTTCGCCCATGCCCGCCCCTGCCCGCAGTTGCCAAAGAGCCGCCTTGTCGCTGTGGGCGTCAGGGCTTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441788.7
3UTR CCA 72 bp CTTGCCTGGAGTCCAGTCCTTGGCCCTGCAGGATTGTaGCCGGCGCCCTGGCAGACGGGCCTGGGAGGCGTC +
Preference number: 3 (lower is better)
Translates to: LAWSPVLGPAGL*PAPWQTGLGGV
Trigger: GACGCCTCCCAGGCCCGTCTGCCAGGGCGCCGGCCACAATCCTGCAGGGCCAAGGACTGGACTCCAGGCAAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441788.7
3UTR GCA 72 bp AGCGCAGGGACTTGCCTGGAGTCCAGTCCTTGGCCCTaGAGGATTGTGGCCGGCGCCCTGGCAGACGGGCCT +
Preference number: 3 (lower is better)
Translates to: SAGTCLESSPWP*RIVAGALADGP
Trigger: AGGCCCGTCTGCCAGGGCGCCGGCCACAATCCTGCAGGGCCAAGGACTGGACTCCAGGCAAGTCCCTGCGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441788.7
3UTR CCA 72 bp GGAGGGCGCCCACCTCCTGGACCCCTTGGGTCTCCTTaGCTTCCCCACGGCTGTTGGCGCTGGTGGACAGGA +
Preference number: 3 (lower is better)
Translates to: GGRPPPGPLGSP*LPHGCWRWWTG
Trigger: TCCTGTCCACCAGCGCCAACAGCCGTGGGGAAGCCAAGGAGACCCAAGGGGTCCAGGAGGTGGGCGCCCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
3UTR GCA 72 bp TCGCCCCAGGAAGCGATGGCCCCACTGGCCTTCGTCTaGCTGTCGGGTGGAGCTGACAGCAGAGGCACCTGC +
Preference number: 3 (lower is better)
Translates to: SPQEAMAPLAFV*LSGGADSRGTC
Trigger: GCAGGTGCCTCTGCTGTCAGCTCCACCCGACAGGCAGACGAAGGCCAGTGGGGCCATCGCTTCCTGGGGCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441788.7
3UTR CCA 72 bp CTCGAAGGATGGAGGGCGCCCACCTCCTGGACCCCTTaGGTCTCCTTGGCTTCCCCACGGCTGTTGGCGCTG +
Preference number: 3 (lower is better)
Translates to: LEGWRAPTSWTP*VSLASPRLLAL
Trigger: CAGCGCCAACAGCCGTGGGGAAGCCAAGGAGACCCAAGGGGTCCAGGAGGTGGGCGCCCTCCATCCTTCGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
3UTR CCA 72 bp AGAACCAGCCCCAACACAAACCTCACGCCGTCCGCCTaGCCCTGCGGCGGTTCCCAGTCCCAGGAGGAGCCT +
Preference number: 3 (lower is better)
Translates to: RTSPNTNLTPSA*PCGGSQSQEEP
Trigger: AGGCTCCTCCTGGGACTGGGAACCGCCGCAGGGCCAGGCGGACGGCGTGAGGTTTGTGTTGGGGCTGGTTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441788.7
3UTR CCA 72 bp AGCTGGAGCGCAGGGACTTGCCTGGAGTCCAGTCCTTaGCCCTGCAGGATTGTGGCCGGCGCCCTGGCAGAC +
Preference number: 3 (lower is better)
Translates to: SWSAGTCLESSP*PCRIVAGALAD
Trigger: GTCTGCCAGGGCGCCGGCCACAATCCTGCAGGGCCAAGGACTGGACTCCAGGCAAGTCCCTGCGCTCCAGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441788.7
3UTR CCA 72 bp CACTGCCAGGGTCGCCCCAGGAAGCGATGGCCCCACTaGCCTTCGTCTGCCTGTCGGGTGGAGCTGACAGCA +
Preference number: 3 (lower is better)
Translates to: HCQGRPRKRWPH*PSSACRVELTA
Trigger: TGCTGTCAGCTCCACCCGACAGGCAGACGAAGGCCAGTGGGGCCATCGCTTCCTGGGGCGACCCTGGCAGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441788.7
3UTR CCA 72 bp TCTCCCAACCACTGCCAGGGTCGCCCCAGGAAGCGATaGCCCCACTGGCCTTCGTCTGCCTGTCGGGTGGAG +
Preference number: 3 (lower is better)
Translates to: SPNHCQGRPRKR*PHWPSSACRVE
Trigger: CTCCACCCGACAGGCAGACGAAGGCCAGTGGGGCCATCGCTTCCTGGGGCGACCCTGGCAGTGGTTGGGAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441788.7
3UTR CCA 72 bp CAAGGATGCCGTGAAGCCCAGGTGGGGACTGTCTCTTaGATCCACAGGCTGGCTCCGCCAGTGGCCCCGAGC +
Preference number: 3 (lower is better)
Translates to: QGCREAQVGTVS*IHRLAPPVAPS
Trigger: GCTCGGGGCCACTGGCGGAGCCAGCCTGTGGATCCAAGAGACAGTCCCCACCTGGGCTTCACGGCATCCTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
3UTR CCA 72 bp GGGAAGCTTCTCGAAGGATGGAGGGCGCCCACCTCCTaGACCCCTTGGGTCTCCTTGGCTTCCCCACGGCTG +
Preference number: 3 (lower is better)
Translates to: GKLLEGWRAPTS*TPWVSLASPRL
Trigger: CAGCCGTGGGGAAGCCAAGGAGACCCAAGGGGTCCAGGAGGTGGGCGCCCTCCATCCTTCGAGAAGCTTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
3UTR CCA 72 bp GAACAGGGCCGTCCAGCTGGAGCGCAGGGACTTGCCTaGAGTCCAGTCCTTGGCCCTGCAGGATTGTGGCCG +
Preference number: 3 (lower is better)
Translates to: EQGRPAGAQGLA*SPVLGPAGLWP
Trigger: CGGCCACAATCCTGCAGGGCCAAGGACTGGACTCCAGGCAAGTCCCTGCGCTCCAGCTGGACGGCCCTGTTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441788.7
3UTR-3UTR CAA 90 bp CTCCTGGACCCCTTGGGTCTCCTTGGCTTCCCCACGGCTGTTGGCGCTGGTGGAGGTGGGGACTGTCTCTaGGATCCACAGGCTGGCTCC +
Preference number: 3 (lower is better)
Translates to: LLDPLGLLGFPTAVGAGGGGDCL*DPQAGS
Trigger: GGAGCCAGCCTGTGGATCCAAGAGACAGTCCCCACC...TCCACCAGCGCCAACAGCCGTGGGGAAGCCAAGGAGACCCAAGGGGTCCAGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
3UTR GCA 72 bp CCTGGAACAGGGCCGTCCAGCTGGAGCGCAGGGACTTaGCTGGAGTCCAGTCCTTGGCCCTGCAGGATTGTG +
Preference number: 3 (lower is better)
Translates to: PGTGPSSWSAGT*LESSPWPCRIV
Trigger: CACAATCCTGCAGGGCCAAGGACTGGACTCCAGGCAAGTCCCTGCGCTCCAGCTGGACGGCCCTGTTCCAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441788.7
3UTR CCA 72 bp CGGGGTCTCAGGCCCCCACCAATCAGCCCTGGCGTCTaGTGGTCTGTTCTGTGCAGACGTGGGCAGTTCCAG +
Preference number: 3 (lower is better)
Translates to: RGLRPPPISPGV*WSVLCRRGQFQ
Trigger: CTGGAACTGCCCACGTCTGCACAGAACAGACCACCAGACGCCAGGGCTGATTGGTGGGGGCCTGAGACCCCG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
3UTR CCA 72 bp TCCCTCCCTGATGGTGTCAACCGAGCACCTCCTCCCTaGAACAGGGCCGTCCAGCTGGAGCGCAGGGACTTG +
Preference number: 3 (lower is better)
Translates to: SLPDGVNRAPPP*NRAVQLERRDL
Trigger: CAAGTCCCTGCGCTCCAGCTGGACGGCCCTGTTCCAGGGAGGAGGTGCTCGGTTGACACCATCAGGGAGGGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441788.7
3UTR TCA 72 bp GGGGACAAGCGCTGGGAAGGCAGAGTCCATGCAAGCTaGGGAGCTGGGGTCCTCCGACTCTGGACAGCTGGT +
Preference number: 3 (lower is better)
Translates to: GDKRWEGRVHAS*GAGVLRLWTAG
Trigger: ACCAGCTGTCCAGAGTCGGAGGACCCCAGCTCCTCAGCTTGCATGGACTCTGCCTTCCCAGCGCTTGTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
3UTR TCA 72 bp GCTTGGCCAGGATGCACAGGCCCATCTGAAGCCCACTaGCCGCCGGGCGATGGCCATGACACAGATGCTTCC +
Preference number: 3 (lower is better)
Translates to: AWPGCTGPSEAH*PPGDGHDTDAS
Trigger: GGAAGCATCTGTGTCATGGCCATCGCCCGGCGGTCAGTGGGCTTCAGATGGGCCTGTGCATCCTGGCCAAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
3UTR TCA 72 bp GGCCACTGTGGGTTGTGCACTGAGCCAGCCAAGCCCTaGCGCCCACAGCGACAAGGCGGCTCTTTGGCAACT +
Preference number: 3 (lower is better)
Translates to: GHCGLCTEPAKP*RPQRQGGSLAT
Trigger: AGTTGCCAAAGAGCCGCCTTGTCGCTGTGGGCGTCAGGGCTTGGCTGGCTCAGTGCACAACCCACAGTGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441788.7
3UTR TCA 72 bp CCTTCTCCAGCCCTGGCTGAAATGCCAGGCTTGTGGTaGGCCTCTGATCCAAGGCCGCCCTTCCCCAAGGCC +
Preference number: 3 (lower is better)
Translates to: PSPALAEMPGLW*ASDPRPPFPKA
Trigger: GGCCTTGGGGAAGGGCGGCCTTGGATCAGAGGCTCACCACAAGCCTGGCATTTCAGCCAGGGCTGGAGAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441788.7
3UTR CCA 72 bp TGGGGGACGCAAGTCTTGCGCAGGGAAGGAGGACGCTaGCCCTGTGAGGGCACGTGTTGGCGAATGCACGAA +
Preference number: 3 (lower is better)
Translates to: WGTQVLRREGGR*PCEGTCWRMHE
Trigger: TTCGTGCATTCGCCAACACGTGCCCTCACAGGGCCAGCGTCCTCCTTCCCTGCGCAAGACTTGCGTCCCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
3UTR CCA 72 bp CTTGGGTCTCCTTGGCTTCCCCACGGCTGTTGGCGCTaGTGGACAGGACAGGTGAAGACACAGGCAGCCTGG +
Preference number: 3 (lower is better)
Translates to: LGSPWLPHGCWR*WTGQVKTQAAW
Trigger: CCAGGCTGCCTGTGTCTTCACCTGTCCTGTCCACCAGCGCCAACAGCCGTGGGGAAGCCAAGGAGACCCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
3UTR-3UTR CAA 90 bp TCAGCTGTCCTGGGCCATGGGGAACCAATTCCCCCATTTCTACACGAGCCCTGGGCTTCCCCACGGCTGTaGGCGCTGGTGGACAGGACA +
Preference number: 3 (lower is better)
Translates to: SAVLGHGEPIPPFLHEPWASPRL*ALVDRT
Trigger: TGTCCTGTCCACCAGCGCCAACAGCCGTGGGGAAGC...CCAGGGCTCGTGTAGAAATGGGGGAATTGGTTCCCCATGGCCCAGGACAGCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000441788.7
3UTR GCA 72 bp CGTGTTGGCGAATGCACGAAGACGTGGCATCTGTTGTaGTCCTCTCCAGCCAGGGCAGTGAGCAGGTCCGGG +
Preference number: 3 (lower is better)
Translates to: RVGECTKTWHLL*SSPARAVSRSG
Trigger: CCCGGACCTGCTCACTGCCCTGGCTGGAGAGGAGCACAACAGATGCCACGTCTTCGTGCATTCGCCAACACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
3UTR GCA 72 bp TCCCCTGCCCTTGTCAGGTCCCCACAGATACGACCCTaGCTTTCCCATCTGGACACGCACCCAGGAGCTCCA +
Preference number: 3 (lower is better)
Translates to: SPALVRSPQIRP*LSHLDTHPGAP
Trigger: TGGAGCTCCTGGGTGCGTGTCCAGATGGGAAAGGCAGGGTCGTATCTGTGGGGACCTGACAAGGGCAGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441788.7
3UTR CCA 72 bp GGTCTCAGGCCCCCACCAATCAGCCCTGGCGTCTGGTaGTCTGTTCTGTGCAGACGTGGGCAGTTCCAGGAA +
Preference number: 3 (lower is better)
Translates to: GLRPPPISPGVW*SVLCRRGQFQE
Trigger: TTCCTGGAACTGCCCACGTCTGCACAGAACAGACCACCAGACGCCAGGGCTGATTGGTGGGGGCCTGAGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
3UTR CCA 72 bp GGTCTGGCCTTGGGGCTGGTCTTGGGTTTGACATGGTaGGGTGCAGCCATGAATGGGCAACCGGGGTCTCAG +
Preference number: 3 (lower is better)
Translates to: GLALGLVLGLTW*GAAMNGQPGSQ
Trigger: CTGAGACCCCGGTTGCCCATTCATGGCTGCACCCCACCATGTCAAACCCAAGACCAGCCCCAAGGCCAGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
3UTR CCA 72 bp TCAGGTCCCCACAGATACGACCCTGCCTTTCCCATCTaGACACGCACCCAGGAGCTCCACTCCCTCGGCGTA +
Preference number: 3 (lower is better)
Translates to: SGPHRYDPAFPI*TRTQELHSLGV
Trigger: TACGCCGAGGGAGTGGAGCTCCTGGGTGCGTGTCCAGATGGGAAAGGCAGGGTCGTATCTGTGGGGACCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441788.7
3UTR-3UTR CAA 90 bp TCCTGGGCCATGGGGAACCAATTCCCCCATTTCTACACGAGCCCTGGCCCATCACCTGGAGTCCAGTCCTaGGCCCTGCAGGATTGTGGC +
Preference number: 3 (lower is better)
Translates to: SWAMGNQFPHFYTSPGPSPGVQS*ALQDCG
Trigger: GCCACAATCCTGCAGGGCCAAGGACTGGACTCCAGG...TGATGGGCCAGGGCTCGTGTAGAAATGGGGGAATTGGTTCCCCATGGCCCAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441788.7
3UTR TCA 72 bp CGTTCCAGAACCTCAGGGTCTCGTCTCCAGCACCAGTaGCGATGGCCTCCCCATCAGGGGACATTGCCAGGT +
Preference number: 3 (lower is better)
Translates to: RSRTSGSRLQHQ*RWPPHQGTLPG
Trigger: ACCTGGCAATGTCCCCTGATGGGGAGGCCATCGTCACTGGTGCTGGAGACGAGACCCTGAGGTTCTGGAACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591290.5
3UTR GCA 72 bp TGTTCTGTGCAGACGTGGGCAGTTCCAGGAAGAGCATaGGGCTCCGGTGGGCAGGTGATGAACAGACGGAGG +
Preference number: 3 (lower is better)
Translates to: CSVQTWAVPGRA*GSGGQVMNRRR
Trigger: CCTCCGTCTGTTCATCACCTGCCCACCGGAGCCGCATGCTCTTCCTGGAACTGCCCACGTCTGCACAGAACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
3UTR GCA 72 bp CCACCAATCAGCCCTGGCGTCTGGTGGTCTGTTCTGTaGAGACGTGGGCAGTTCCAGGAAGAGCATGCGGCT +
Preference number: 3 (lower is better)
Translates to: PPISPGVWWSVL*RRGQFQEEHAA
Trigger: AGCCGCATGCTCTTCCTGGAACTGCCCACGTCTGCACAGAACAGACCACCAGACGCCAGGGCTGATTGGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
3UTR GCA 72 bp GAGGACGCTGGCCCTGTGAGGGCACGTGTTGGCGAATaGACGAAGACGTGGCATCTGTTGTGCTCCTCTCCA +
Preference number: 3 (lower is better)
Translates to: EDAGPVRARVGE*TKTWHLLCSSP
Trigger: TGGAGAGGAGCACAACAGATGCCACGTCTTCGTGCATTCGCCAACACGTGCCCTCACAGGGCCAGCGTCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
3UTR GCA 72 bp ACATGGGCCAGGTCTGCTCGGTTTCATCATCTCCAATaGCCAGGATGGGGCCTGCCCCAGCTCCTTCACCCT +
Preference number: 3 (lower is better)
Translates to: TWARSARFHHLQ*PGWGLPQLLHP
Trigger: AGGGTGAAGGAGCTGGGGCAGGCCCCATCCTGGGCATTGGAGATGATGAAACCGAGCAGACCTGGCCCATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441788.7
3UTR CCA 72 bp CTGAGTACAGACGGTCTGAGCCGGGACCGTCCAATGTaGTTCTCGCCCTTTGGGAAGGGAGACAGAGCCCCT +
Preference number: 3 (lower is better)
Translates to: LSTDGLSRDRPM*FSPFGKGDRAP
Trigger: AGGGGCTCTGTCTCCCTTCCCAAAGGGCGAGAACCACATTGGACGGTCCCGGCTCAGACCGTCTGTACTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
3UTR CCA 72 bp CCTGTGAGGGCACGTGTTGGCGAATGCACGAAGACGTaGCATCTGTTGTGCTCCTCTCCAGCCAGGGCAGTG +
Preference number: 3 (lower is better)
Translates to: PVRARVGECTKT*HLLCSSPARAV
Trigger: CACTGCCCTGGCTGGAGAGGAGCACAACAGATGCCACGTCTTCGTGCATTCGCCAACACGTGCCCTCACAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
3UTR-3UTR CAA 90 bp GATGCTTCCAGAGAGACTGCTGCTTCGAGCAGTGACAGCAGAGGTGGCTGCAAGGGGCTGGTCTTGGGTTaGACATGGTGGGGTGCAGCC +
Preference number: 3 (lower is better)
Translates to: DASRETAASSSDSRGGCKGLVLG*TWWGAA
Trigger: GGCTGCACCCCACCATGTCAAACCCAAGACCAGCCC...CTTGCAGCCACCTCTGCTGTCACTGCTCGAAGCAGCAGTCTCTCTGGAAGCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
3UTR-3UTR CAA 90 bp CCAATTCCCCCATTTCTACACGAGCCCTGGCCCATCATCATGGGACCCTCCCACGCCTTGGGGCTGGTCTaGGGTTTGACATGGTGGGGT +
Preference number: 3 (lower is better)
Translates to: PIPPFLHEPWPIIMGPSHALGLV*GLTWWG
Trigger: ACCCCACCATGTCAAACCCAAGACCAGCCCCAAGGC...GTGGGAGGGTCCCATGATGATGGGCCAGGGCTCGTGTAGAAATGGGGGAATTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000441788.7
3UTR TCA 72 bp GCCCCACCCAGACAGAGGTGGGGAGAGTCTCTCCAGTaGATGTGGAAGATCGACCCGCTTGAAATGACGGGG +
Preference number: 3 (lower is better)
Translates to: APPRQRWGESLQ*MWKIDPLEMTG
Trigger: CCCCGTCATTTCAAGCGGGTCGATCTTCCACATTCACTGGAGAGACTCTCCCCACCTCTGTCTGGGTGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441788.7
3UTR CCA 72 bp AGCCAGGGCAGTGAGCAGGTCCGGGTTCAGTTCTCCTaGGGTGATAAGTCCAGAGCAGACATCCTCCTCCAG +
Preference number: 3 (lower is better)
Translates to: SQGSEQVRVQFS*GDKSRADILLQ
Trigger: CTGGAGGAGGATGTCTGCTCTGGACTTATCACCCCAGGAGAACTGAACCCGGACCTGCTCACTGCCCTGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
3UTR CCA 72 bp CATGGGGAACCAATTCCCCCATTTCTACACGAGCCCTaGCCCATCATCATGGGACCCTCCCACCACGGCCTT +
Preference number: 3 (lower is better)
Translates to: HGEPIPPFLHEP*PIIMGPSHHGL
Trigger: AAGGCCGTGGTGGGAGGGTCCCATGATGATGGGCCAGGGCTCGTGTAGAAATGGGGGAATTGGTTCCCCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441788.7
3UTR CCA 72 bp CTGTCTCTGGGCTGTGTCCCCCATGCCAGCTCCACATaGGCCAGGTCTGCTCGGTTTCATCATCTCCAATGC +
Preference number: 3 (lower is better)
Translates to: LSLGCVPHASST*ARSARFHHLQC
Trigger: GCATTGGAGATGATGAAACCGAGCAGACCTGGCCCATGTGGAGCTGGCATGGGGGACACAGCCCAGAGACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441788.7
3UTR GCA 72 bp CTCATAAGCTTCTCTGTCTCTGGGCTGTGTCCCCCATaGCAGCTCCACATGGGCCAGGTCTGCTCGGTTTCA +
Preference number: 3 (lower is better)
Translates to: LISFSVSGLCPP*QLHMGQVCSVS
Trigger: TGAAACCGAGCAGACCTGGCCCATGTGGAGCTGGCATGGGGGACACAGCCCAGAGACAGAGAAGCTTATGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441788.7
3UTR CCA 72 bp GAGGGTCCCCGACCACGTGCCCACCCCAGATACTGGTaGACATGGTTCACAATCAGGCATTTAATGAGACTC +
Preference number: 3 (lower is better)
Translates to: EGPRPRAHPRYW*TWFTIRHLMRL
Trigger: GAGTCTCATTAAATGCCTGATTGTGAACCATGTCCACCAGTATCTGGGGTGGGCACGTGGTCGGGGACCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
3UTR CCA 72 bp GCTGAGGGTCCCCGACCACGTGCCCACCCCAGATACTaGTGGACATGGTTCACAATCAGGCATTTAATGAGA +
Preference number: 3 (lower is better)
Translates to: AEGPRPRAHPRY*WTWFTIRHLMR
Trigger: TCTCATTAAATGCCTGATTGTGAACCATGTCCACCAGTATCTGGGGTGGGCACGTGGTCGGGGACCCTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
3UTR CCA 72 bp CCCCGACCACGTGCCCACCCCAGATACTGGTGGACATaGTTCACAATCAGGCATTTAATGAGACTCCAGGAT +
Preference number: 3 (lower is better)
Translates to: PRPRAHPRYWWT*FTIRHLMRLQD
Trigger: ATCCTGGAGTCTCATTAAATGCCTGATTGTGAACCATGTCCACCAGTATCTGGGGTGGGCACGTGGTCGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
3UTR TCA 72 bp AGAGTCTCTCCAGTGAATGTGGAAGATCGACCCGCTTaGAATGACGGGGCTTTAAAACCAGGACCTCATCCC +
Preference number: 3 (lower is better)
Translates to: RVSPVNVEDRPA*NDGALKPGPHP
Trigger: GGGATGAGGTCCTGGTTTTAAAGCCCCGTCATTTCAAGCGGGTCGATCTTCCACATTCACTGGAGAGACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441788.7
3UTR TCA 72 bp GTTTTCTTATTTAAAAACCTTGAAACAGTAAGACCGTaGCCACTGGAAATCCACACTGCCACGTGCACCAGC +
Preference number: 3 (lower is better)
Translates to: VFLFKNLETVRP*PLEIHTATCTS
Trigger: GCTGGTGCACGTGGCAGTGTGGATTTCCAGTGGTCACGGTCTTACTGTTTCAAGGTTTTTAAATAAGAAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR GCA 90 bp TTGTGGCCGGCGCCCTGGCAGACGGGCCTGGGAGGCGTCTCTGCGGCCTTCGAGGGGCTGTGTCCCCCATaGCAGCTCCACATGGGCCAG +
Preference number: 4 (lower is better)
Translates to: LWPAPWQTGLGGVSAAFEGLCPP*QLHMGQ
Trigger: CTGGCCCATGTGGAGCTGGCATGGGGGACACAGCCC...CTCGAAGGCCGCAGAGACGCCTCCCAGGCCCGTCTGCCAGGGCGCCGGCCACAA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR CCA 90 bp TGCAGGATTGTGGCCGGCGCCCTGGCAGACGGGCCTGGGAGGCGTCTCTGCGGCCCGACGCGTGCCGTGTaGCCCTCCAACATGGACAGC +
Preference number: 4 (lower is better)
Translates to: CRIVAGALADGPGRRLCGPTRAV*PSNMDS
Trigger: GCTGTCCATGTTGGAGGGCCACACGGCACGCGTCGG...GCCGCAGAGACGCCTCCCAGGCCCGTCTGCCAGGGCGCCGGCCACAATCCTGCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR CCA 90 bp TGCAGGATTGTGGCCGGCGCCCTGGCAGACGGGCCTGGGAGGCGTCTCTGCGGCAGGGCGCCCACCTCCTaGACCCCTTGGGTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: CRIVAGALADGPGRRLCGRAPTS*TPWVSL
Trigger: CAAGGAGACCCAAGGGGTCCAGGAGGTGGGCGCCCT...GCCGCAGAGACGCCTCCCAGGCCCGTCTGCCAGGGCGCCGGCCACAATCCTGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441788.7
3UTR CAA 72 bp GGACTTGCCTGGAGTCCAGTCCTTGGCCCTGCAGGATaGTGGCCGGCGCCCTGGCAGACGGGCCTGGGAGGC +
Preference number: 4 (lower is better)
Translates to: GLAWSPVLGPAG*WPAPWQTGLGG
Trigger: GCCTCCCAGGCCCGTCTGCCAGGGCGCCGGCCACAATCCTGCAGGGCCAAGGACTGGACTCCAGGCAAGTCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR GCA 90 bp CATGGGGGACGCAAGTCTTGCGCAGGGAAGGAGGACGCTGGCCCTGTGAGGGCATCCTGCCGGTGGCCCTaGAGCCGCCGCTCCGACTGC +
Preference number: 4 (lower is better)
Translates to: HGGRKSCAGKEDAGPVRASCRWP*SRRSDC
Trigger: GCAGTCGGAGCGGCGGCTGCAGGGCCACCGGCAGGA...TGCCCTCACAGGGCCAGCGTCCTCCTTCCCTGCGCAAGACTTGCGTCCCCCATG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR GCA 90 bp CTGGCAGACGGGCCTGGGAGGCGTCTCTGCGGCCTTCGAGGGCTGAGCTCCCCAGGGTCCCCGACCACGTaGCCACCCCAGATACTGGTG +
Preference number: 4 (lower is better)
Translates to: LADGPGRRLCGLRGLSSPGSPTT*PPQILV
Trigger: CACCAGTATCTGGGGTGGGCACGTGGTCGGGGACCC...TGGGGAGCTCAGCCCTCGAAGGCCGCAGAGACGCCTCCCAGGCCCGTCTGCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR GCA 90 bp TTGTGGCCGGCGCCCTGGCAGACGGGCCTGGGAGGCGTCTCTGCGGCCTTCGAGTACCAGGTGCCGTCCTaGCCCAGGGCCTTTGCATGG +
Preference number: 4 (lower is better)
Translates to: LWPAPWQTGLGGVSAAFEYQVPS*PRAFAW
Trigger: CCATGCAAAGGCCCTGGGGCAGGACGGCACCTGGTA...CTCGAAGGCCGCAGAGACGCCTCCCAGGCCCGTCTGCCAGGGCGCCGGCCACAA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR CCA 90 bp CTCCTGGACCCCTTGGGTCTCCTTGGCTTCCCCACGGCTGTTGGCGCTGGTGGACACACCTCCTGCCGGTaGCCCTGCAGCCGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: LLDPLGLLGFPTAVGAGGHTSCR*PCSRRS
Trigger: GGAGCGGCGGCTGCAGGGCCACCGGCAGGAGGTGTG...TCCACCAGCGCCAACAGCCGTGGGGAAGCCAAGGAGACCCAAGGGGTCCAGGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CCA 90 bp GGCAACCGGGGTCTCAGGCCCCCACCAATCAGCCCTGGCGTCTGGTGGTCTGTTCCTGGCTCGCTCCCGTaGCTCGCTGGCTCCCGCCGA +
Preference number: 4 (lower is better)
Translates to: GNRGLRPPPISPGVWWSVPGSLP*LAGSRR
Trigger: TCGGCGGGAGCCAGCGAGCCACGGGAGCGAGCCAGG...AACAGACCACCAGACGCCAGGGCTGATTGGTGGGGGCCTGAGACCCCGGTTGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR CCA 90 bp CTGGCAGACGGGCCTGGGAGGCGTCTCTGCGGCCTTCGAGGGCTGAGCTCCCCAGGGGTCCTCCGACTCTaGACAGCTGGTGTGGCACGG +
Preference number: 4 (lower is better)
Translates to: LADGPGRRLCGLRGLSSPGVLRL*TAGVAR
Trigger: CCGTGCCACACCAGCTGTCCAGAGTCGGAGGACCCC...TGGGGAGCTCAGCCCTCGAAGGCCGCAGAGACGCCTCCCAGGCCCGTCTGCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR CCA 90 bp GGCAACCGGGGTCTCAGGCCCCCACCAATCAGCCCTGGCGTCTGGTGGTCTGTTGGCTGGCTCCGCCAGTaGCCCCGAGCCACCTGCCCA +
Preference number: 4 (lower is better)
Translates to: GNRGLRPPPISPGVWWSVGWLRQ*PRATCP
Trigger: TGGGCAGGTGGCTCGGGGCCACTGGCGGAGCCAGCC...AACAGACCACCAGACGCCAGGGCTGATTGGTGGGGGCCTGAGACCCCGGTTGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR TCA 90 bp TGGGGACTGTCTCTTGGATCCACAGGCTGGCTCCGCCAGTGGCCCCGAGCCACCGCCAGCAGCCCGTGCTaGTGTGGGGACCAGGCGATG +
Preference number: 4 (lower is better)
Translates to: WGLSLGSTGWLRQWPRATASSPC*CGDQAM
Trigger: CATCGCCTGGTCCCCACATCAGCACGGGCTGCTGGC...GGTGGCTCGGGGCCACTGGCGGAGCCAGCCTGTGGATCCAAGAGACAGTCCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR GCA 90 bp GCCCGCCCAGCCGCCTTCCTCGGGGGACAAGCGCTGGGAAGGCAGAGTCCATGCCTCCCGGACGACAGCTaGTCAGCATTCCAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: ARPAAFLGGQALGRQSPCLPDDS*SAFQAS
Trigger: GCTGGCCTGGAATGCTGAGCAGCTGTCGTCCGGGAG...GCATGGACTCTGCCTTCCCAGCGCTTGTCCCCCGAGGAAGGCGGCTGGGCGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR GCA 90 bp CATTGCCAGGTACAGCACGCGGTAGGAGTGCCCGGTCAGCTTGGCCACCTGGGTAGCCCGCACACCTCCTaGCGGTGGCCCTGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: HCQVQHAVGVPGQLGHLGSPHTS*RWPCSR
Trigger: GCGGCTGCAGGGCCACCGGCAGGAGGTGTGCGGGCT...ACCCAGGTGGCCAAGCTGACCGGGCACTCCTACCGCGTGCTGTACCTGGCAATG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591290.5
CDS-3UTR GCA 90 bp AGCACCTCCTCCCTGGAACAGGGCCGTCCAGCTGGAGCGCAGGGACTTGCCTGGCCTGGGAGGCGTCTCTaGGGCCTTCGAGGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: STSSLEQGRPAGAQGLAWPGRRL*GLRGLS
Trigger: GCTCAGCCCTCGAAGGCCGCAGAGACGCCTCCCAGG...CCAGGCAAGTCCCTGCGCTCCAGCTGGACGGCCCTGTTCCAGGGAGGAGGTGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR CCA 90 bp CCAGCCACCCAGCAGGCATGGGGGACGCAAGTCTTGCGCAGGGAAGGAGGACGCAGGACACTGGGGAGCTaGCAGGCGTCAGGGTCCGCC +
Preference number: 4 (lower is better)
Translates to: PATQQAWGTQVLRREGGRRTLGS*QASGSA
Trigger: GGCGGACCCTGACGCCTGCCAGCTCCCCAGTGTCCT...GCGTCCTCCTTCCCTGCGCAAGACTTGCGTCCCCCATGCCTGCTGGGTGGCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CCA 90 bp CGCAAGTCTTGCGCAGGGAAGGAGGACGCTGGCCCTGTGAGGGCACGTGTTGGCGGGCCACACCGCTGCTaGCCTCCACAGGACCCAGCC +
Preference number: 4 (lower is better)
Translates to: RKSCAGKEDAGPVRARVGGPHRC*PPQDPA
Trigger: GGCTGGGTCCTGTGGAGGCCAGCAGCGGTGTGGCCC...GCCAACACGTGCCCTCACAGGGCCAGCGTCCTCCTTCCCTGCGCAAGACTTGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CCA 90 bp GCCATGAATGGGCAACCGGGGTCTCAGGCCCCCACCAATCAGCCCTGGCGTCTGCCCAGGAGCAGTGGGTaGGTCCTGGCCCCTCCCCGT +
Preference number: 4 (lower is better)
Translates to: AMNGQPGSQAPTNQPWRLPRSSG*VLAPPR
Trigger: ACGGGGAGGGGCCAGGACCCACCCACTGCTCCTGGG...CAGACGCCAGGGCTGATTGGTGGGGGCCTGAGACCCCGGTTGCCCATTCATGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR CCA 90 bp ACCGGGGTCTCAGGCCCCCACCAATCAGCCCTGGCGTCTGGTGGTCTGTTCTGTTTGTGGCCGGCGCCCTaGCAGACGGGCCTGGGAGGC +
Preference number: 4 (lower is better)
Translates to: TGVSGPHQSALASGGLFCLWPAP*QTGLGG
Trigger: GCCTCCCAGGCCCGTCTGCCAGGGCGCCGGCCACAA...ACAGAACAGACCACCAGACGCCAGGGCTGATTGGTGGGGGCCTGAGACCCCGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR CCA 90 bp CGGGGTCTCAGGCCCCCACCAATCAGCCCTGGCGTCTGGTGGTCTGTTCTGTGCGGGCAGCAGGGACTCTaGCTCGCTCCCGTGGCTCGC +
Preference number: 4 (lower is better)
Translates to: RGLRPPPISPGVWWSVLCGQQGL*LAPVAR
Trigger: GCGAGCCACGGGAGCGAGCCAGAGTCCCTGCTGCCC...GCACAGAACAGACCACCAGACGCCAGGGCTGATTGGTGGGGGCCTGAGACCCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652521.1
CDS-3UTR TCA 90 bp TGCAGGATTGTGGCCGGCGCCCTGGCAGACGGGCCTGGGAGGCGTCTCTGCGGCCCAGCAGCTCATTCTTaGGCAGGGCAGAGTAGGCCA +
Preference number: 4 (lower is better)
Translates to: CRIVAGALADGPGRRLCGPAAHS*AGQSRP
Trigger: TGGCCTACTCTGCCCTGCTCAAGAATGAGCTGCTGG...GCCGCAGAGACGCCTCCCAGGCCCGTCTGCCAGGGCGCCGGCCACAATCCTGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR TCA 90 bp CTCCTGGACCCCTTGGGTCTCCTTGGCTTCCCCACGGCTGTTGGCGCTGGTGGAGCCAGCAGCCCGTGCTaGTGTGGGGACCAGGCGATG +
Preference number: 4 (lower is better)
Translates to: LLDPLGLLGFPTAVGAGGASSPC*CGDQAM
Trigger: CATCGCCTGGTCCCCACATCAGCACGGGCTGCTGGC...TCCACCAGCGCCAACAGCCGTGGGGAAGCCAAGGAGACCCAAGGGGTCCAGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR TCA 90 bp ATGCAAGCTGAGGAGCTGGGGTCCTCCGACTCTGGACAGCTGGTGTGGCACGGTTGCACAGGCGCACAGTaGGGGGTCCGCGCCCCACCC +
Preference number: 4 (lower is better)
Translates to: MQAEELGSSDSGQLVWHGCTGAQ*GVRAPP
Trigger: GGGTGGGGCGCGGACCCCTCACTGTGCGCCTGTGCA...ACCGTGCCACACCAGCTGTCCAGAGTCGGAGGACCCCAGCTCCTCAGCTTGCAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR GCA 90 bp CCTCCTCCCTGGAACAGGGCCGTCCAGCTGGAGCGCAGGGACTTGCCTGGAGTCAGCGGTCTCCGTGCTTaGTGGGCGAGGACACTGGGG +
Preference number: 4 (lower is better)
Translates to: PPPWNRAVQLERRDLPGVSGLRA*WARTLG
Trigger: CCCCAGTGTCCTCGCCCAGCAAGCACGGAGACCGCT...GACTCCAGGCAAGTCCCTGCGCTCCAGCTGGACGGCCCTGTTCCAGGGAGGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR GCA 90 bp AGGGGACATTGCCAGGTACAGCACGCGGTAGGAGTGCCCGGTCAGCTTGGCCACAGCCGCCGCTCCGACTaGAGTGGCGGGGTGCGGATG +
Preference number: 4 (lower is better)
Translates to: RGHCQVQHAVGVPGQLGHSRRSD*SGGVRM
Trigger: CATCCGCACCCCGCCACTGCAGTCGGAGCGGCGGCT...GTGGCCAAGCTGACCGGGCACTCCTACCGCGTGCTGTACCTGGCAATGTCCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591290.5
CDS-3UTR GCA 90 bp TGGGGACTGTCTCTTGGATCCACAGGCTGGCTCCGCCAGTGGCCCCGAGCCACCGCGTCTCCCAACCACTaGCAGGGTCGCCCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: WGLSLGSTGWLRQWPRATASPNH*QGRPRK
Trigger: CTTCCTGGGGCGACCCTGGCAGTGGTTGGGAGACGC...GGTGGCTCGGGGCCACTGGCGGAGCCAGCCTGTGGATCCAAGAGACAGTCCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR GCA 90 bp ACCGGGGTCTCAGGCCCCCACCAATCAGCCCTGGCGTCTGGTGGTCTGTTCTGTGGTGGGGGCGGAGCCTaGACCCTGGTCTCCGCTTCC +
Preference number: 4 (lower is better)
Translates to: TGVSGPHQSALASGGLFCGGGGA*TLVSAS
Trigger: GGAAGCGGAGACCAGGGTGCAGGCTCCGCCCCCACC...ACAGAACAGACCACCAGACGCCAGGGCTGATTGGTGGGGGCCTGAGACCCCGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR CCA 90 bp CGGGGTCTCAGGCCCCCACCAATCAGCCCTGGCGTCTGGTGGTCTGTTCTGTGCGTGGGGACCAGGCGATaGCCTTCACGGCCGCCAGGT +
Preference number: 4 (lower is better)
Translates to: RGLRPPPISPGVWWSVLCVGTRR*PSRPPG
Trigger: ACCTGGCGGCCGTGAAGGCCATCGCCTGGTCCCCAC...GCACAGAACAGACCACCAGACGCCAGGGCTGATTGGTGGGGGCCTGAGACCCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CCA 90 bp GCCCGCCCAGCCGCCTTCCTCGGGGGACAAGCGCTGGGAAGGCAGAGTCCATGCGTCAGCTTGGCCACCTaGGTCAGGGAGGGGTACTTC +
Preference number: 4 (lower is better)
Translates to: ARPAAFLGGQALGRQSPCVSLAT*VREGYF
Trigger: GAAGTACCCCTCCCTGACCCAGGTGGCCAAGCTGAC...GCATGGACTCTGCCTTCCCAGCGCTTGTCCCCCGAGGAAGGCGGCTGGGCGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CCA 90 bp TGGGGACTGTCTCTTGGATCCACAGGCTGGCTCCGCCAGTGGCCCCGAGCCACCCATAGTCCTGGTCCATaGCGAGGCAGGGCTCGGCCC +
Preference number: 4 (lower is better)
Translates to: WGLSLGSTGWLRQWPRATHSPGP*RGRARP
Trigger: GGGCCGAGCCCTGCCTCGCCATGGACCAGGACTATG...GGTGGCTCGGGGCCACTGGCGGAGCCAGCCTGTGGATCCAAGAGACAGTCCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CCA 90 bp TGCAAGCTGAGGAGCTGGGGTCCTCCGACTCTGGACAGCTGGTGTGGCACGGTCGGGCCACACCGCTGCTaGCCTCCACAGGACCCAGCC +
Preference number: 4 (lower is better)
Translates to: CKLRSWGPPTLDSWCGTVGPHRC*PPQDPA
Trigger: GGCTGGGTCCTGTGGAGGCCAGCAGCGGTGTGGCCC...GACCGTGCCACACCAGCTGTCCAGAGTCGGAGGACCCCAGCTCCTCAGCTTGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CCA 90 bp CCAGCCACCCAGCAGGCATGGGGGACGCAAGTCTTGCGCAGGGAAGGAGGACGCAGCACAGCAGGGTGGTaGGTGGGACCCTCCAACCCC +
Preference number: 4 (lower is better)
Translates to: PATQQAWGTQVLRREGGRSTAGW*VGPSNP
Trigger: GGGGTTGGAGGGTCCCACCCACCACCCTGCTGTGCT...GCGTCCTCCTTCCCTGCGCAAGACTTGCGTCCCCCATGCCTGCTGGGTGGCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR CCA 90 bp AGGAAGAGCATGCGGCTCCGGTGGGCAGGTGATGAACAGACGGAGGCAGTGAGGTGCCCCTCCTCTGGCTaGGCCCGGCCTTGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: RKSMRLRWAGDEQTEAVRCPSSG*ARPWVG
Trigger: CCCCACCCAAGGCCGGGCCCAGCCAGAGGAGGGGCA...CCTCACTGCCTCCGTCTGTTCATCACCTGCCCACCGGAGCCGCATGCTCTTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441788.7
3UTR CAA 72 bp CAGCTGGAGCGCAGGGACTTGCCTGGAGTCCAGTCCTaGGCCCTGCAGGATTGTGGCCGGCGCCCTGGCAGA +
Preference number: 4 (lower is better)
Translates to: QLERRDLPGVQS*ALQDCGRRPGR
Trigger: TCTGCCAGGGCGCCGGCCACAATCCTGCAGGGCCAAGGACTGGACTCCAGGCAAGTCCCTGCGCTCCAGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR TCA 90 bp GCCATGAATGGGCAACCGGGGTCTCAGGCCCCCACCAATCAGCCCTGGCGTCTGCGGCTCTGGAGGGGATaGAGCGGTCTCCGTGCTTGC +
Preference number: 4 (lower is better)
Translates to: AMNGQPGSQAPTNQPWRLRLWRG*SGLRAC
Trigger: GCAAGCACGGAGACCGCTTCATCCCCTCCAGAGCCG...CAGACGCCAGGGCTGATTGGTGGGGGCCTGAGACCCCGGTTGCCCATTCATGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR TCA 90 bp CGGGGTCTCAGGCCCCCACCAATCAGCCCTGGCGTCTGGTGGTCTGTTCTGTGCGGTCTGTGGACCACTTaGGCCCGCACACCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: RGLRPPPISPGVWWSVLCGLWTT*ARTPPA
Trigger: GGCAGGAGGTGTGCGGGCTCAAGTGGTCCACAGACC...GCACAGAACAGACCACCAGACGCCAGGGCTGATTGGTGGGGGCCTGAGACCCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR TCA 90 bp CCAGCCACCCAGCAGGCATGGGGGACGCAAGTCTTGCGCAGGGAAGGAGGACGCAGGACGCTGGCCCTGTaGGGGCACGTGTTGGCGAAT +
Preference number: 4 (lower is better)
Translates to: PATQQAWGTQVLRREGGRRTLAL*GHVLAN
Trigger: ATTCGCCAACACGTGCCCTCACAGGGCCAGCGTCCT...GCGTCCTCCTTCCCTGCGCAAGACTTGCGTCCCCCATGCCTGCTGGGTGGCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR TCA 90 bp CCTCCTCCCTGGAACAGGGCCGTCCAGCTGGAGCGCAGGGACTTGCCTGGAGTCGGTGGACAGGACAGGTaGAGACACAGGCAGCCTGGG +
Preference number: 4 (lower is better)
Translates to: PPPWNRAVQLERRDLPGVGGQDR*RHRQPG
Trigger: CCCAGGCTGCCTGTGTCTTCACCTGTCCTGTCCACC...GACTCCAGGCAAGTCCCTGCGCTCCAGCTGGACGGCCCTGTTCCAGGGAGGAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR GCA 90 bp GAGGAGCCTGGGAAGCTTCTCGAAGGATGGAGGGCGCCCACCTCCTGGACCCCTAGCGGTCTCCGTGCTTaGTGGGCGAGGACACTGGGG +
Preference number: 4 (lower is better)
Translates to: EEPGKLLEGWRAPTSWTPSGLRA*WARTLG
Trigger: CCCCAGTGTCCTCGCCCAGCAAGCACGGAGACCGCT...AGGGGTCCAGGAGGTGGGCGCCCTCCATCCTTCGAGAAGCTTCCCAGGCTCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR GCA 90 bp CATGGGGGACGCAAGTCTTGCGCAGGGAAGGAGGACGCTGGCCCTGTGAGGGCATGGAGGGCTGCAGCCTaGGGTCCTCAGTCTGCGGGT +
Preference number: 4 (lower is better)
Translates to: HGGRKSCAGKEDAGPVRAWRAAA*GPQSAG
Trigger: ACCCGCAGACTGAGGACCGCAGGCTGCAGCCCTCCA...TGCCCTCACAGGGCCAGCGTCCTCCTTCCCTGCGCAAGACTTGCGTCCCCCATG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR GCA 90 bp TGCAAGCTGAGGAGCTGGGGTCCTCCGACTCTGGACAGCTGGTGTGGCACGGTCCAGCGCCCCGACGCGTaGCGTGTGGCCCTCCAACAT +
Preference number: 4 (lower is better)
Translates to: CKLRSWGPPTLDSWCGTVQRPDA*RVALQH
Trigger: ATGTTGGAGGGCCACACGGCACGCGTCGGGGCGCTG...GACCGTGCCACACCAGCTGTCCAGAGTCGGAGGACCCCAGCTCCTCAGCTTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR GCA 90 bp TGGGGACTGTCTCTTGGATCCACAGGCTGGCTCCGCCAGTGGCCCCGAGCCACCGTGCGGATGTCCCTCTaGAGGATCATGCGGTCGCGG +
Preference number: 4 (lower is better)
Translates to: WGLSLGSTGWLRQWPRATVRMSL*RIMRSR
Trigger: CCGCGACCGCATGATCCTGCAGAGGGACATCCGCAC...GGTGGCTCGGGGCCACTGGCGGAGCCAGCCTGTGGATCCAAGAGACAGTCCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR GCA 90 bp TCAGGCCCCCACCAATCAGCCCTGGCGTCTGGTGGTCTGTTCTGTGCAGACGTGAGCCGCCGCTCCGACTaGAGTGGCGGGGTGCGGATG +
Preference number: 4 (lower is better)
Translates to: SGPHQSALASGGLFCADVSRRSD*SGGVRM
Trigger: CATCCGCACCCCGCCACTGCAGTCGGAGCGGCGGCT...CACGTCTGCACAGAACAGACCACCAGACGCCAGGGCTGATTGGTGGGGGCCTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR GCA 90 bp CGCTGGCCCTGTGAGGGCACGTGTTGGCGAATGCACGAAGACGTGGCATCTGTTAGCCCGCACACCTCCTaGCGGTGGCCCTGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: RWPCEGTCWRMHEDVASVSPHTS*RWPCSR
Trigger: GCGGCTGCAGGGCCACCGGCAGGAGGTGTGCGGGCT...AACAGATGCCACGTCTTCGTGCATTCGCCAACACGTGCCCTCACAGGGCCAGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR GCA 90 bp CCTCCTCCCTGGAACAGGGCCGTCCAGCTGGAGCGCAGGGACTTGCCTGGAGTCTTCACGGCCGCCAGGTaGTCCGTGTACTGCTGCACG +
Preference number: 4 (lower is better)
Translates to: PPPWNRAVQLERRDLPGVFTAAR*SVYCCT
Trigger: CGTGCAGCAGTACACGGAGCACCTGGCGGCCGTGAA...GACTCCAGGCAAGTCCCTGCGCTCCAGCTGGACGGCCCTGTTCCAGGGAGGAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR GCA 90 bp GACGGTCTGAGCCGGGACCGTCCAATGTGGTTCTCGCCCTTTGGGAAGGGAGACCGGGGGCCACACCGCTaGTGGCCTCCACAGGACCCA +
Preference number: 4 (lower is better)
Translates to: DGLSRDRPMWFSPFGKGDRGPHR*WPPQDP
Trigger: TGGGTCCTGTGGAGGCCAGCAGCGGTGTGGCCCCCG...GTCTCCCTTCCCAAAGGGCGAGAACCACATTGGACGGTCCCGGCTCAGACCGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR GCA 90 bp CTGCTGAGGGTCCCCGACCACGTGCCCACCCCAGATACTGGTGGACATGGTTCACGGGGGCCACACCGCTaGTGGCCTCCACAGGACCCA +
Preference number: 4 (lower is better)
Translates to: LLRVPDHVPTPDTGGHGSRGPHR*WPPQDP
Trigger: TGGGTCCTGTGGAGGCCAGCAGCGGTGTGGCCCCCG...TGAACCATGTCCACCAGTATCTGGGGTGGGCACGTGGTCGGGGACCCTCAGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR GCA 90 bp TCTGTTCTGTGCAGACGTGGGCAGTTCCAGGAAGAGCATGCGGCTCCGGTGGGCCTGGGGCCTCCTGGCTaGCAGGACCCCCACAGCCTC +
Preference number: 4 (lower is better)
Translates to: SVLCRRGQFQEEHAAPVGLGPPG*QDPHSL
Trigger: GAGGCTGTGGGGGTCCTGGCAGCCAGGAGGCCCCAG...GCCCACCGGAGCCGCATGCTCTTCCTGGAACTGCCCACGTCTGCACAGAACAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR CCA 90 bp ACATTGCCAGGTACAGCACGCGGTAGGAGTGCCCGGTCAGCTTGGCCACCTGGGCCGCTCCGACTGCAGTaGCGGGGTGCGGATGTCCCT +
Preference number: 4 (lower is better)
Translates to: TLPGTARGRSARSAWPPGPLRLQ*RGADVP
Trigger: AGGGACATCCGCACCCCGCCACTGCAGTCGGAGCGG...CCCAGGTGGCCAAGCTGACCGGGCACTCCTACCGCGTGCTGTACCTGGCAATGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591290.5
CDS-3UTR CCA 90 bp GGCATCCGTCGCTCTGAGTACAGACGGTCTGAGCCGGGACCGTCCAATGTGGTTCACACCTCCTGCCGGTaGCCCTGCAGCCGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: GIRRSEYRRSEPGPSNVVHTSCR*PCSRRS
Trigger: GGAGCGGCGGCTGCAGGGCCACCGGCAGGAGGTGTG...AACCACATTGGACGGTCCCGGCTCAGACCGTCTGTACTCAGAGCGACGGATGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CCA 90 bp CGCAAGTCTTGCGCAGGGAAGGAGGACGCTGGCCCTGTGAGGGCACGTGTTGGCAGTGCCCGGTCAGCTTaGCCACCTGGGTCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: RKSCAGKEDAGPVRARVGSARSA*PPGSGR
Trigger: CCTCCCTGACCCAGGTGGCCAAGCTGACCGGGCACT...GCCAACACGTGCCCTCACAGGGCCAGCGTCCTCCTTCCCTGCGCAAGACTTGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CCA 90 bp ACCGGGGTCTCAGGCCCCCACCAATCAGCCCTGGCGTCTGGTGGTCTGTTCTGTGCGGCAAGGTTAGCCTaGCTCGCTCCCGTGGCTCGC +
Preference number: 4 (lower is better)
Translates to: TGVSGPHQSALASGGLFCAARLA*LAPVAR
Trigger: GCGAGCCACGGGAGCGAGCCAGGCTAACCTTGCCGC...ACAGAACAGACCACCAGACGCCAGGGCTGATTGGTGGGGGCCTGAGACCCCGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR CCA 90 bp AGAGGAGCCTGGGAAGCTTCTCGAAGGATGGAGGGCGCCCACCTCCTGGACCCCCCGACTCTGGACAGCTaGTGTGGCACGGTCCTGCCC +
Preference number: 4 (lower is better)
Translates to: RGAWEASRRMEGAHLLDPPTLDS*CGTVLP
Trigger: GGGCAGGACCGTGCCACACCAGCTGTCCAGAGTCGG...GGGGTCCAGGAGGTGGGCGCCCTCCATCCTTCGAGAAGCTTCCCAGGCTCCTCT
67% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CCA 90 bp CGCAAGTCTTGCGCAGGGAAGGAGGACGCTGGCCCTGTGAGGGCACGTGTTGGCGCCACCCAGCAGGCATaGGGGACGCAAGTCTTGCGC +
Preference number: 4 (lower is better)
Translates to: RKSCAGKEDAGPVRARVGATQQA*GTQVLR
Trigger: GCGCAAGACTTGCGTCCCCCATGCCTGCTGGGTGGC...GCCAACACGTGCCCTCACAGGGCCAGCGTCCTCCTTCCCTGCGCAAGACTTGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CCA 90 bp GAAGACGTGGCATCTGTTGTGCTCCTCTCCAGCCAGGGCAGTGAGCAGGTCCGGGGCCCTGCAGGATTGTaGCCGGCGCCCTGGCAGACG +
Preference number: 4 (lower is better)
Translates to: EDVASVVLLSSQGSEQVRGPAGL*PAPWQT
Trigger: CGTCTGCCAGGGCGCCGGCCACAATCCTGCAGGGCC...CCGGACCTGCTCACTGCCCTGGCTGGAGAGGAGCACAACAGATGCCACGTCTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR CCA 90 bp CCTCCTCCCTGGAACAGGGCCGTCCAGCTGGAGCGCAGGGACTTGCCTGGAGTCGCGCAGGGACTTGCCTaGAGTCCAGTCCTTGGCCCT +
Preference number: 4 (lower is better)
Translates to: PPPWNRAVQLERRDLPGVAQGLA*SPVLGP
Trigger: AGGGCCAAGGACTGGACTCCAGGCAAGTCCCTGCGC...GACTCCAGGCAAGTCCCTGCGCTCCAGCTGGACGGCCCTGTTCCAGGGAGGAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR CCA 90 bp GGCAACCGGGGTCTCAGGCCCCCACCAATCAGCCCTGGCGTCTGGTGGTCTGTTCCTGGCCCATCATCATaGGACCCTCCCACCACGGCC +
Preference number: 4 (lower is better)
Translates to: GNRGLRPPPISPGVWWSVPGPSS*DPPTTA
Trigger: GGCCGTGGTGGGAGGGTCCCATGATGATGGGCCAGG...AACAGACCACCAGACGCCAGGGCTGATTGGTGGGGGCCTGAGACCCCGGTTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR CCA 90 bp GACGGTCTGAGCCGGGACCGTCCAATGTGGTTCTCGCCCTTTGGGAAGGGAGACCCCAGCGCTGCTGAGTaGCCCCCGTGCCCCGCAAAG +
Preference number: 4 (lower is better)
Translates to: DGLSRDRPMWFSPFGKGDPSAAE*PPCPAK
Trigger: CTTTGCGGGGCACGGGGGCCACTCAGCAGCGCTGGG...GTCTCCCTTCCCAAAGGGCGAGAACCACATTGGACGGTCCCGGCTCAGACCGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR CCA 90 bp GACGTGGGCAGTTCCAGGAAGAGCATGCGGCTCCGGTGGGCAGGTGATGAACAGTCTGGCTCGCTCCCGTaGCTCGCTGGCTCCCGCCGA +
Preference number: 4 (lower is better)
Translates to: DVGSSRKSMRLRWAGDEQSGSLP*LAGSRR
Trigger: TCGGCGGGAGCCAGCGAGCCACGGGAGCGAGCCAGA...CTGTTCATCACCTGCCCACCGGAGCCGCATGCTCTTCCTGGAACTGCCCACGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652521.1
CDS-3UTR TCA 90 bp AGGGGACATTGCCAGGTACAGCACGCGGTAGGAGTGCCCGGTCAGCTTGGCCACCGGCTCTGGAGGGGATaGAGCGGTCTCCGTGCTTGC +
Preference number: 4 (lower is better)
Translates to: RGHCQVQHAVGVPGQLGHRLWRG*SGLRAC
Trigger: GCAAGCACGGAGACCGCTTCATCCCCTCCAGAGCCG...GTGGCCAAGCTGACCGGGCACTCCTACCGCGTGCTGTACCTGGCAATGTCCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591290.5
CDS-3UTR TCA 90 bp GCCCGCCCAGCCGCCTTCCTCGGGGGACAAGCGCTGGGAAGGCAGAGTCCATGCGTCTTTGCCGTTGTCTaGGGTGGCGTCCTTGGCTTT +
Preference number: 4 (lower is better)
Translates to: ARPAAFLGGQALGRQSPCVFAVV*GGVLGF
Trigger: AAAGCCAAGGACGCCACCTCAGACAACGGCAAAGAC...GCATGGACTCTGCCTTCCCAGCGCTTGTCCCCCGAGGAAGGCGGCTGGGCGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR TCA 90 bp ACCGGGGTCTCAGGCCCCCACCAATCAGCCCTGGCGTCTGGTGGTCTGTTCTGTGGTCTGTGGACCACTTaGGCCCGCACACCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: TGVSGPHQSALASGGLFCGLWTT*ARTPPA
Trigger: GGCAGGAGGTGTGCGGGCTCAAGTGGTCCACAGACC...ACAGAACAGACCACCAGACGCCAGGGCTGATTGGTGGGGGCCTGAGACCCCGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR TCA 90 bp CGCAAGTCTTGCGCAGGGAAGGAGGACGCTGGCCCTGTGAGGGCACGTGTTGGCGGTGGACAGGACAGGTaGAGACACAGGCAGCCTGGG +
Preference number: 4 (lower is better)
Translates to: RKSCAGKEDAGPVRARVGGGQDR*RHRQPG
Trigger: CCCAGGCTGCCTGTGTCTTCACCTGTCCTGTCCACC...GCCAACACGTGCCCTCACAGGGCCAGCGTCCTCCTTCCCTGCGCAAGACTTGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR TCA 90 bp CGCAAGTCTTGCGCAGGGAAGGAGGACGCTGGCCCTGTGAGGGCACGTGTTGGCCCACGTCCCCACCGATaGAATGGGAAGGGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: RKSCAGKEDAGPVRARVGPRPHR*NGKGWW
Trigger: CCACCACCCCTTCCCATTTCATCGGTGGGGACGTGG...GCCAACACGTGCCCTCACAGGGCCAGCGTCCTCCTTCCCTGCGCAAGACTTGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR TCA 90 bp TTGTGGCCGGCGCCCTGGCAGACGGGCCTGGGAGGCGTCTCTGCGGCCTTCGAGTCGACCCGCTTGAAATaGCGGGGCTTTAAAACCAGG +
Preference number: 4 (lower is better)
Translates to: LWPAPWQTGLGGVSAAFESTRLK*RGFKTR
Trigger: CCTGGTTTTAAAGCCCCGTCATTTCAAGCGGGTCGA...CTCGAAGGCCGCAGAGACGCCTCCCAGGCCCGTCTGCCAGGGCGCCGGCCACAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR GCA 90 bp AGAGGAGCCTGGGAAGCTTCTCGAAGGATGGAGGGCGCCCACCTCCTGGACCCCCTGCGGTCCTCAGTCTaGGGGTCCTGCACCTTCTCG +
Preference number: 4 (lower is better)
Translates to: RGAWEASRRMEGAHLLDPLRSSV*GSCTFS
Trigger: CGAGAAGGTGCAGGACCCGCAGACTGAGGACCGCAG...GGGGTCCAGGAGGTGGGCGCCCTCCATCCTTCGAGAAGCTTCCCAGGCTCCTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR GCA 90 bp GAGGAGCCTGGGAAGCTTCTCGAAGGATGGAGGGCGCCCACCTCCTGGACCCCTCTCCCGGACGACAGCTaGTCAGCATTCCAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: EEPGKLLEGWRAPTSWTPLPDDS*SAFQAS
Trigger: GCTGGCCTGGAATGCTGAGCAGCTGTCGTCCGGGAG...AGGGGTCCAGGAGGTGGGCGCCCTCCATCCTTCGAGAAGCTTCCCAGGCTCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR GCA 90 bp CTGCTGAGGGTCCCCGACCACGTGCCCACCCCAGATACTGGTGGACATGGTTCACCCTCTGCAGGATCATaGGGTCGCGGCTCCCGGACG +
Preference number: 4 (lower is better)
Translates to: LLRVPDHVPTPDTGGHGSPSAGS*GRGSRT
Trigger: CGTCCGGGAGCCGCGACCGCATGATCCTGCAGAGGG...TGAACCATGTCCACCAGTATCTGGGGTGGGCACGTGGTCGGGGACCCTCAGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR GCA 90 bp CGCAAGTCTTGCGCAGGGAAGGAGGACGCTGGCCCTGTGAGGGCACGTGTTGGCGTGCGGATGTCCCTCTaGAGGATCATGCGGTCGCGG +
Preference number: 4 (lower is better)
Translates to: RKSCAGKEDAGPVRARVGVRMSL*RIMRSR
Trigger: CCGCGACCGCATGATCCTGCAGAGGGACATCCGCAC...GCCAACACGTGCCCTCACAGGGCCAGCGTCCTCCTTCCCTGCGCAAGACTTGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR GCA 90 bp GGTCAGCTTGGCCACCTGGGTCAGGGAGGGGTACTTCCAGACAAGGATCTGGTTTCCTGCCGGTGGCCCTaGAGCCGCCGCTCCGACTGC +
Preference number: 4 (lower is better)
Translates to: GQLGHLGQGGVLPDKDLVSCRWP*SRRSDC
Trigger: GCAGTCGGAGCGGCGGCTGCAGGGCCACCGGCAGGA...AACCAGATCCTTGTCTGGAAGTACCCCTCCCTGACCCAGGTGGCCAAGCTGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591290.5
CDS-3UTR GCA 90 bp ACATGCCTTGGTCTGGCCTTGGGGCTGGTCTTGGGTTTGACATGGTGGGGTGCAAGCCCGCACACCTCCTaGCGGTGGCCCTGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: TCLGLALGLVLGLTWWGASPHTS*RWPCSR
Trigger: GCGGCTGCAGGGCCACCGGCAGGAGGTGTGCGGGCT...TGCACCCCACCATGTCAAACCCAAGACCAGCCCCAAGGCCAGACCAAGGCATGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR GCA 90 bp GCCATGAATGGGCAACCGGGGTCTCAGGCCCCCACCAATCAGCCCTGGCGTCTGTGCTCCGTGTACTGCTaGACGGGGCTCAGGCTCGAG +
Preference number: 4 (lower is better)
Translates to: AMNGQPGSQAPTNQPWRLCSVYC*TGLRLE
Trigger: CTCGAGCCTGAGCCCCGTGCAGCAGTACACGGAGCA...CAGACGCCAGGGCTGATTGGTGGGGGCCTGAGACCCCGGTTGCCCATTCATGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR GCA 90 bp CTCCTGGACCCCTTGGGTCTCCTTGGCTTCCCCACGGCTGTTGGCGCTGGTGGAAGGTGCTCCGTGTACTaGTGCACGGGGCTCAGGCTC +
Preference number: 4 (lower is better)
Translates to: LLDPLGLLGFPTAVGAGGRCSVY*CTGLRL
Trigger: GAGCCTGAGCCCCGTGCAGCAGTACACGGAGCACCT...TCCACCAGCGCCAACAGCCGTGGGGAAGCCAAGGAGACCCAAGGGGTCCAGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR GCA 90 bp AGCACCTCCTCCCTGGAACAGGGCCGTCCAGCTGGAGCGCAGGGACTTGCCTGGATCCACACTGCCACGTaGACCAGCACCCCCTGCACA +
Preference number: 4 (lower is better)
Translates to: STSSLEQGRPAGAQGLAWIHTAT*TSTPCT
Trigger: TGTGCAGGGGGTGCTGGTGCACGTGGCAGTGTGGAT...CCAGGCAAGTCCCTGCGCTCCAGCTGGACGGCCCTGTTCCAGGGAGGAGGTGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR GCA 90 bp TCTGTTCTGTGCAGACGTGGGCAGTTCCAGGAAGAGCATGCGGCTCCGGTGGGCCGGCTCTTTGGCAACTaGGGGCAGGGGCGGGCATGG +
Preference number: 4 (lower is better)
Translates to: SVLCRRGQFQEEHAAPVGRLFGN*GQGRAW
Trigger: CCATGCCCGCCCCTGCCCGCAGTTGCCAAAGAGCCG...GCCCACCGGAGCCGCATGCTCTTCCTGGAACTGCCCACGTCTGCACAGAACAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR GCA 90 bp CGCAAGTCTTGCGCAGGGAAGGAGGACGCTGGCCCTGTGAGGGCACGTGTTGGCGGTCTCCGCTTCCCCTaGCCTTGTCAGGTCCCCACA +
Preference number: 4 (lower is better)
Translates to: RKSCAGKEDAGPVRARVGGLRFP*PCQVPT
Trigger: TGTGGGGACCTGACAAGGGCAGGGGAAGCGGAGACC...GCCAACACGTGCCCTCACAGGGCCAGCGTCCTCCTTCCCTGCGCAAGACTTGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR GCA 90 bp AGAGGAGCCTGGGAAGCTTCTCGAAGGATGGAGGGCGCCCACCTCCTGGACCCCCATCCAGAAACCTCCTaGCCTGCCCTGCCCCTCCTC +
Preference number: 4 (lower is better)
Translates to: RGAWEASRRMEGAHLLDPHPETS*PALPLL
Trigger: GAGGAGGGGCAGGGCAGGGCAGGAGGTTTCTGGATG...GGGGTCCAGGAGGTGGGCGCCCTCCATCCTTCGAGAAGCTTCCCAGGCTCCTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR GCA 90 bp CTGCTGAGGGTCCCCGACCACGTGCCCACCCCAGATACTGGTGGACATGGTTCACCACCGTCGGCTCCATaGAGGTCGCCCAGCACTGGC +
Preference number: 4 (lower is better)
Translates to: LLRVPDHVPTPDTGGHGSPPSAP*RSPSTG
Trigger: GCCAGTGCTGGGCGACCTGCATGGAGCCGACGGTGG...TGAACCATGTCCACCAGTATCTGGGGTGGGCACGTGGTCGGGGACCCTCAGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652521.1
CDS-3UTR CCA 90 bp AGAGGAGCCTGGGAAGCTTCTCGAAGGATGGAGGGCGCCCACCTCCTGGACCCCCCTTCTTCTCAGGCGTaGAGGGCTGCAGCCTGCGGT +
Preference number: 4 (lower is better)
Translates to: RGAWEASRRMEGAHLLDPPSSQA*RAAACG
Trigger: ACCGCAGGCTGCAGCCCTCCACGCCTGAGAAGAAGG...GGGGTCCAGGAGGTGGGCGCCCTCCATCCTTCGAGAAGCTTCCCAGGCTCCTCT
66% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CCA 90 bp CCAGGTACAGCACGCGGTAGGAGTGCCCGGTCAGCTTGGCCACCTGGGTCAGGGGAGGCGAGGAGCTGGTaGTCTGTGGACCACTTGAGC +
Preference number: 4 (lower is better)
Translates to: PGTARGRSARSAWPPGSGEARSW*SVDHLS
Trigger: GCTCAAGTGGTCCACAGACCACCAGCTCCTCGCCTC...CCCTGACCCAGGTGGCCAAGCTGACCGGGCACTCCTACCGCGTGCTGTACCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591290.5
CDS-3UTR CCA 90 bp GAGTCCATGCAAGCTGAGGAGCTGGGGTCCTCCGACTCTGGACAGCTGGTGTGGGTGGGGACCAGGCGATaGCCTTCACGGCCGCCAGGT +
Preference number: 4 (lower is better)
Translates to: ESMQAEELGSSDSGQLVWVGTRR*PSRPPG
Trigger: ACCTGGCGGCCGTGAAGGCCATCGCCTGGTCCCCAC...CCACACCAGCTGTCCAGAGTCGGAGGACCCCAGCTCCTCAGCTTGCATGGACTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CCA 90 bp CATGGGGGACGCAAGTCTTGCGCAGGGAAGGAGGACGCTGGCCCTGTGAGGGCACAGCCCGTGCTGATGTaGGGACCAGGCGATGGCCTT +
Preference number: 4 (lower is better)
Translates to: HGGRKSCAGKEDAGPVRAQPVLM*GPGDGL
Trigger: AAGGCCATCGCCTGGTCCCCACATCAGCACGGGCTG...TGCCCTCACAGGGCCAGCGTCCTCCTTCCCTGCGCAAGACTTGCGTCCCCCATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CCA 90 bp CCTCCTCCCTGGAACAGGGCCGTCCAGCTGGAGCGCAGGGACTTGCCTGGAGTCTGCTCACCAGCTCGTTaGCGTGCTTGGACCAGGCCA +
Preference number: 4 (lower is better)
Translates to: PPPWNRAVQLERRDLPGVCSPAR*RAWTRP
Trigger: TGGCCTGGTCCAAGCACGCCAACGAGCTGGTGAGCA...GACTCCAGGCAAGTCCCTGCGCTCCAGCTGGACGGCCCTGTTCCAGGGAGGAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR CCA 90 bp TGCAGGATTGTGGCCGGCGCCCTGGCAGACGGGCCTGGGAGGCGTCTCTGCGGCGCCCACCCCAGATACTaGTGGACATGGTTCACAATC +
Preference number: 4 (lower is better)
Translates to: CRIVAGALADGPGRRLCGAHPRY*WTWFTI
Trigger: GATTGTGAACCATGTCCACCAGTATCTGGGGTGGGC...GCCGCAGAGACGCCTCCCAGGCCCGTCTGCCAGGGCGCCGGCCACAATCCTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR CCA 90 bp CCTCCTCCCTGGAACAGGGCCGTCCAGCTGGAGCGCAGGGACTTGCCTGGAGTCAGCATGCGGCTCCGGTaGGCAGGTGATGAACAGACG +
Preference number: 4 (lower is better)
Translates to: PPPWNRAVQLERRDLPGVSMRLR*AGDEQT
Trigger: CGTCTGTTCATCACCTGCCCACCGGAGCCGCATGCT...GACTCCAGGCAAGTCCCTGCGCTCCAGCTGGACGGCCCTGTTCCAGGGAGGAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR CCA 90 bp GCCCGCCCAGCCGCCTTCCTCGGGGGACAAGCGCTGGGAAGGCAGAGTCCATGCATCAGCCCTGGCGTCTaGTGGTCTGTTCTGTGCAGA +
Preference number: 4 (lower is better)
Translates to: ARPAAFLGGQALGRQSPCISPGV*WSVLCR
Trigger: TCTGCACAGAACAGACCACCAGACGCCAGGGCTGAT...GCATGGACTCTGCCTTCCCAGCGCTTGTCCCCCGAGGAAGGCGGCTGGGCGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CCA 90 bp AGAGGAGCCTGGGAAGCTTCTCGAAGGATGGAGGGCGCCCACCTCCTGGACCCCGGGTGCAGCCATGAATaGGCAACCGGGGTCTCAGGC +
Preference number: 4 (lower is better)
Translates to: RGAWEASRRMEGAHLLDPGCSHE*ATGVSG
Trigger: GCCTGAGACCCCGGTTGCCCATTCATGGCTGCACCC...GGGGTCCAGGAGGTGGGCGCCCTCCATCCTTCGAGAAGCTTCCCAGGCTCCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CCA 90 bp CGCTGGCCCTGTGAGGGCACGTGTTGGCGAATGCACGAAGACGTGGCATCTGTTAAGACACAGGCAGCCTaGGGGCGGGGGCCACACCGC +
Preference number: 4 (lower is better)
Translates to: RWPCEGTCWRMHEDVASVKTQAA*GRGPHR
Trigger: GCGGTGTGGCCCCCGCCCCCAGGCTGCCTGTGTCTT...AACAGATGCCACGTCTTCGTGCATTCGCCAACACGTGCCCTCACAGGGCCAGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CCA 90 bp CGGGGTCTCAGGCCCCCACCAATCAGCCCTGGCGTCTGGTGGTCTGTTCTGTGCCCCCTTGGGTCTCCTTaGCTTCCCCACGGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: RGLRPPPISPGVWWSVLCPLGSP*LPHGCW
Trigger: CCAACAGCCGTGGGGAAGCCAAGGAGACCCAAGGGG...GCACAGAACAGACCACCAGACGCCAGGGCTGATTGGTGGGGGCCTGAGACCCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CCA 90 bp CCTTGGCTTCCCCACGGCTGTTGGCGCTGGTGGACAGGACAGGTGAAGACACAGGGGCAGGGGCGGGCATaGGCGAAGGCAGGGTTGGTT +
Preference number: 4 (lower is better)
Translates to: PWLPHGCWRWWTGQVKTQGQGRA*AKAGLV
Trigger: AACCAACCCTGCCTTCGCCCATGCCCGCCCCTGCCC...CTGTGTCTTCACCTGTCCTGTCCACCAGCGCCAACAGCCGTGGGGAAGCCAAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR CCA 90 bp GCCCGCCCAGCCGCCTTCCTCGGGGGACAAGCGCTGGGAAGGCAGAGTCCATGCAAGCTTCTCTGTCTCTaGGCTGTGTCCCCCATGCCA +
Preference number: 4 (lower is better)
Translates to: ARPAAFLGGQALGRQSPCKLLCL*AVSPMP
Trigger: TGGCATGGGGGACACAGCCCAGAGACAGAGAAGCTT...GCATGGACTCTGCCTTCCCAGCGCTTGTCCCCCGAGGAAGGCGGCTGGGCGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR CCA 90 bp CCTCCTCCCTGGAACAGGGCCGTCCAGCTGGAGCGCAGGGACTTGCCTGGAGTCCCCAGGGCCTTTGCATaGCTGTGCCCTTTGCCTCTC +
Preference number: 4 (lower is better)
Translates to: PPPWNRAVQLERRDLPGVPRAFA*LCPLPL
Trigger: GAGAGGCAAAGGGCACAGCCATGCAAAGGCCCTGGG...GACTCCAGGCAAGTCCCTGCGCTCCAGCTGGACGGCCCTGTTCCAGGGAGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR CCA 90 bp TCAGCTGTCCTGGGCCATGGGGAACCAATTCCCCCATTTCTACACGAGCCCTGGGCCCTGCCCCTCCTCTaGCTGGGCCCGGCCTTGGGT +
Preference number: 4 (lower is better)
Translates to: SAVLGHGEPIPPFLHEPWALPLL*LGPALG
Trigger: ACCCAAGGCCGGGCCCAGCCAGAGGAGGGGCAGGGC...CCAGGGCTCGTGTAGAAATGGGGGAATTGGTTCCCCATGGCCCAGGACAGCTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR CCA 90 bp CGGGGTCTCAGGCCCCCACCAATCAGCCCTGGCGTCTGGTGGTCTGTTCTGTGCCAGGTCGCCCAGCACTaGCGGCTTCACAAGCCCCAT +
Preference number: 4 (lower is better)
Translates to: RGLRPPPISPGVWWSVLCQVAQH*RLHKPH
Trigger: ATGGGGCTTGTGAAGCCGCCAGTGCTGGGCGACCTG...GCACAGAACAGACCACCAGACGCCAGGGCTGATTGGTGGGGGCCTGAGACCCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000652521.1
CDS-3UTR CCA 90 bp ACCGGGGTCTCAGGCCCCCACCAATCAGCCCTGGCGTCTGGTGGTCTGTTCTGTGCCCTCCGCCCTCCTTaGGGTAGATCAGCCACCACC +
Preference number: 4 (lower is better)
Translates to: TGVSGPHQSALASGGLFCALRPP*GRSATT
Trigger: GGTGGTGGCTGATCTACCCCAAGGAGGGCGGAGGGC...ACAGAACAGACCACCAGACGCCAGGGCTGATTGGTGGGGGCCTGAGACCCCGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652521.1
CDS-3UTR CCA 90 bp GCCATGAATGGGCAACCGGGGTCTCAGGCCCCCACCAATCAGCCCTGGCGTCTGCAGGCTGTGCAGAGGTaGTGCGTGCAGCCACAGAGG +
Preference number: 4 (lower is better)
Translates to: AMNGQPGSQAPTNQPWRLQAVQR*CVQPQR
Trigger: CCTCTGTGGCTGCACGCACCACCTCTGCACAGCCTG...CAGACGCCAGGGCTGATTGGTGGGGGCCTGAGACCCCGGTTGCCCATTCATGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652521.1
3UTR CAA 72 bp CCCTGGAACAGGGCCGTCCAGCTGGAGCGCAGGGACTaGCCTGGAGTCCAGTCCTTGGCCCTGCAGGATTGT +
Preference number: 4 (lower is better)
Translates to: PWNRAVQLERRD*PGVQSLALQDC
Trigger: ACAATCCTGCAGGGCCAAGGACTGGACTCCAGGCAAGTCCCTGCGCTCCAGCTGGACGGCCCTGTTCCAGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR TCA 90 bp CGCAAGTCTTGCGCAGGGAAGGAGGACGCTGGCCCTGTGAGGGCACGTGTTGGCGGGCTCAGGCTCGAGTaGTTCCAGACCAGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: RKSCAGKEDAGPVRARVGGLRLE*FQTSSL
Trigger: CAAGCTGCTGGTCTGGAATCACTCGAGCCTGAGCCC...GCCAACACGTGCCCTCACAGGGCCAGCGTCCTCCTTCCCTGCGCAAGACTTGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR TCA 90 bp AGAGGAGCCTGGGAAGCTTCTCGAAGGATGGAGGGCGCCCACCTCCTGGACCCCAGAGTCCATGCAAGCTaGGGAGCTGGGGTCCTCCGA +
Preference number: 4 (lower is better)
Translates to: RGAWEASRRMEGAHLLDPRVHAS*GAGVLR
Trigger: TCGGAGGACCCCAGCTCCTCAGCTTGCATGGACTCT...GGGGTCCAGGAGGTGGGCGCCCTCCATCCTTCGAGAAGCTTCCCAGGCTCCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR TCA 90 bp CCTTGGCTTCCCCACGGCTGTTGGCGCTGGTGGACAGGACAGGTGAAGACACAGCCATCTGAAGCCCACTaGCCGCCGGGCGATGGCCAT +
Preference number: 4 (lower is better)
Translates to: PWLPHGCWRWWTGQVKTQPSEAH*PPGDGH
Trigger: ATGGCCATCGCCCGGCGGTCAGTGGGCTTCAGATGG...CTGTGTCTTCACCTGTCCTGTCCACCAGCGCCAACAGCCGTGGGGAAGCCAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR TCA 90 bp TGCAAGCTGAGGAGCTGGGGTCCTCCGACTCTGGACAGCTGGTGTGGCACGGTCCTGTGGGTTGTGCACTaGGCCAGCCAAGCCCTGACG +
Preference number: 4 (lower is better)
Translates to: CKLRSWGPPTLDSWCGTVLWVVH*ASQALT
Trigger: CGTCAGGGCTTGGCTGGCTCAGTGCACAACCCACAG...GACCGTGCCACACCAGCTGTCCAGAGTCGGAGGACCCCAGCTCCTCAGCTTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR TCA 90 bp CATAAGCTTCTCTGTCTCTGGGCTGTGTCCCCCATGCCAGCTCCACATGGGCCAGGCCAGCCCTGGGGGTaGACTCAGCCCAGCAGTGCC +
Preference number: 4 (lower is better)
Translates to: HKLLCLWAVSPMPAPHGPGQPWG*TQPSSA
Trigger: GGCACTGCTGGGCTGAGTTCACCCCCAGGGCTGGCC...TGGCCCATGTGGAGCTGGCATGGGGGACACAGCCCAGAGACAGAGAAGCTTATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR TCA 90 bp TGCAAGCTGAGGAGCTGGGGTCCTCCGACTCTGGACAGCTGGTGTGGCACGGTCGGCAGTACTGTGGCATaGAAACCCCACCCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: CKLRSWGPPTLDSWCGTVGSTVA*KPHPGG
Trigger: GCCCCCAGGGTGGGGTTTTCATGCCACAGTACTGCC...GACCGTGCCACACCAGCTGTCCAGAGTCGGAGGACCCCAGCTCCTCAGCTTGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000652521.1
CDS-3UTR GCA 90 bp GGGACATTGCCAGGTACAGCACGCGGTAGGAGTGCCCGGTCAGCTTGGCCACCTCTGCGGTCCTCAGTCTaGGGGTCCTGCACCTTCTCG +
Preference number: 4 (lower is better)
Translates to: GTLPGTARGRSARSAWPPLRSSV*GSCTFS
Trigger: CGAGAAGGTGCAGGACCCGCAGACTGAGGACCGCAG...AGGTGGCCAAGCTGACCGGGCACTCCTACCGCGTGCTGTACCTGGCAATGTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591290.5
CDS-3UTR GCA 90 bp GACGTGGGCAGTTCCAGGAAGAGCATGCGGCTCCGGTGGGCAGGTGATGAACAGTCAGGCGTGGAGGGCTaGAGCCTGCGGTCCTCAGTC +
Preference number: 4 (lower is better)
Translates to: DVGSSRKSMRLRWAGDEQSGVEG*SLRSSV
Trigger: GACTGAGGACCGCAGGCTGCAGCCCTCCACGCCTGA...CTGTTCATCACCTGCCCACCGGAGCCGCATGCTCTTCCTGGAACTGCCCACGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR GCA 90 bp TGCAAGCTGAGGAGCTGGGGTCCTCCGACTCTGGACAGCTGGTGTGGCACGGTCCGAAGCCCTTGTGTGTaGCCACCGCCACCAGGTTCC +
Preference number: 4 (lower is better)
Translates to: CKLRSWGPPTLDSWCGTVRSPCV*PPPPGS
Trigger: GGAACCTGGTGGCGGTGGGCACACACAAGGGCTTCG...GACCGTGCCACACCAGCTGTCCAGAGTCGGAGGACCCCAGCTCCTCAGCTTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR GCA 90 bp GGGACATTGCCAGGTACAGCACGCGGTAGGAGTGCCCGGTCAGCTTGGCCACCTCTCCCGGACGACAGCTaGTCAGCATTCCAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: GTLPGTARGRSARSAWPPLPDDS*SAFQAS
Trigger: GCTGGCCTGGAATGCTGAGCAGCTGTCGTCCGGGAG...AGGTGGCCAAGCTGACCGGGCACTCCTACCGCGTGCTGTACCTGGCAATGTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591290.5
CDS-3UTR GCA 90 bp CGGTCAGCTTGGCCACCTGGGTCAGGGAGGGGTACTTCCAGACAAGGATCTGGTCCCTCTGCAGGATCATaGGGTCGCGGCTCCCGGACG +
Preference number: 4 (lower is better)
Translates to: RSAWPPGSGRGTSRQGSGPSAGS*GRGSRT
Trigger: CGTCCGGGAGCCGCGACCGCATGATCCTGCAGAGGG...ACCAGATCCTTGTCTGGAAGTACCCCTCCCTGACCCAGGTGGCCAAGCTGACCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591290.5
CDS-3UTR GCA 90 bp GGGACATTGCCAGGTACAGCACGCGGTAGGAGTGCCCGGTCAGCTTGGCCACCTGTGCGGATGTCCCTCTaGAGGATCATGCGGTCGCGG +
Preference number: 4 (lower is better)
Translates to: GTLPGTARGRSARSAWPPVRMSL*RIMRSR
Trigger: CCGCGACCGCATGATCCTGCAGAGGGACATCCGCAC...AGGTGGCCAAGCTGACCGGGCACTCCTACCGCGTGCTGTACCTGGCAATGTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591290.5
CDS-3UTR GCA 90 bp ACATGCCTTGGTCTGGCCTTGGGGCTGGTCTTGGGTTTGACATGGTGGGGTGCAAGCCGCCGCTCCGACTaGAGTGGCGGGGTGCGGATG +
Preference number: 4 (lower is better)
Translates to: TCLGLALGLVLGLTWWGASRRSD*SGGVRM
Trigger: CATCCGCACCCCGCCACTGCAGTCGGAGCGGCGGCT...TGCACCCCACCATGTCAAACCCAAGACCAGCCCCAAGGCCAGACCAAGGCATGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR GCA 90 bp ACCGGGGTCTCAGGCCCCCACCAATCAGCCCTGGCGTCTGGTGGTCTGTTCTGTGCAGCTTGTTGTCGTTaGCCCCCGAGGCGAGGAGCT +
Preference number: 4 (lower is better)
Translates to: TGVSGPHQSALASGGLFCAACCR*PPRRGA
Trigger: AGCTCCTCGCCTCGGGGGGCAACGACAACAAGCTGC...ACAGAACAGACCACCAGACGCCAGGGCTGATTGGTGGGGGCCTGAGACCCCGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR GCA 90 bp TGGGGACTGTCTCTTGGATCCACAGGCTGGCTCCGCCAGTGGCCCCGAGCCACCACCAGCTCGTTGGCGTaGTTGGACCAGGCCAGATTG +
Preference number: 4 (lower is better)
Translates to: WGLSLGSTGWLRQWPRATTSSLA*LDQARL
Trigger: CAATCTGGCCTGGTCCAAGCACGCCAACGAGCTGGT...GGTGGCTCGGGGCCACTGGCGGAGCCAGCCTGTGGATCCAAGAGACAGTCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR GCA 90 bp GAGTCCATGCAAGCTGAGGAGCTGGGGTCCTCCGACTCTGGACAGCTGGTGTGGGCCTCCCTCCCTGCCTaGTGTGCAGCCTGGGAGCAT +
Preference number: 4 (lower is better)
Translates to: ESMQAEELGSSDSGQLVWASLPA*CAAWEH
Trigger: ATGCTCCCAGGCTGCACAGCAGGCAGGGAGGGAGGC...CCACACCAGCTGTCCAGAGTCGGAGGACCCCAGCTCCTCAGCTTGCATGGACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR GCA 90 bp TGCAAGCTGAGGAGCTGGGGTCCTCCGACTCTGGACAGCTGGTGTGGCACGGTCGGCCACTGTGGGTTGTaGACTGAGCCAGCCAAGCCC +
Preference number: 4 (lower is better)
Translates to: CKLRSWGPPTLDSWCGTVGHCGL*TEPAKP
Trigger: GGGCTTGGCTGGCTCAGTGCACAACCCACAGTGGCC...GACCGTGCCACACCAGCTGTCCAGAGTCGGAGGACCCCAGCTCCTCAGCTTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR GCA 90 bp GTGAGCAGGTCCGGGTTCAGTTCTCCTGGGGTGATAAGTCCAGAGCAGACATCCCCGTCCGCCTGGCCCTaGGGCGGTTCCCAGTCCCAG +
Preference number: 4 (lower is better)
Translates to: VSRSGFSSPGVISPEQTSPSAWP*GGSQSQ
Trigger: CTGGGACTGGGAACCGCCGCAGGGCCAGGCGGACGG...GGATGTCTGCTCTGGACTTATCACCCCAGGAGAACTGAACCCGGACCTGCTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR GCA 90 bp CATGGGGGACGCAAGTCTTGCGCAGGGAAGGAGGACGCTGGCCCTGTGAGGGCAAAGCCCCTCAGAAGCTaGTTCTGCAGCTCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: HGGRKSCAGKEDAGPVRAKPLRS*FCSSRA
Trigger: GGCCCTGGAGCTGCAGAAGCAGCTTCTGAGGGGCTT...TGCCCTCACAGGGCCAGCGTCCTCCTTCCCTGCGCAAGACTTGCGTCCCCCATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR GCA 90 bp GACGGTCTGAGCCGGGACCGTCCAATGTGGTTCTCGCCCTTTGGGAAGGGAGACTCCAGTCCTTGGCCCTaGAGGATTGTGGCCGGCGCC +
Preference number: 4 (lower is better)
Translates to: DGLSRDRPMWFSPFGKGDSSPWP*RIVAGA
Trigger: GGCGCCGGCCACAATCCTGCAGGGCCAAGGACTGGA...GTCTCCCTTCCCAAAGGGCGAGAACCACATTGGACGGTCCCGGCTCAGACCGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR GCA 90 bp CTCAGGCCCCCACCAATCAGCCCTGGCGTCTGGTGGTCTGTTCTGTGCAGACGTGACAGCAGAGGCACCTaGCCCAGCGCTGCTGAGTGG +
Preference number: 4 (lower is better)
Translates to: LRPPPISPGVWWSVLCRRDSRGT*PSAAEW
Trigger: CCACTCAGCAGCGCTGGGGCAGGTGCCTCTGCTGTC...ACGTCTGCACAGAACAGACCACCAGACGCCAGGGCTGATTGGTGGGGGCCTGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR GCA 90 bp CTCAGGCCCCCACCAATCAGCCCTGGCGTCTGGTGGTCTGTTCTGTGCAGACGTCCTGGGCCAGGCTCCTaGCTCCTGCACCTCTCATCG +
Preference number: 4 (lower is better)
Translates to: LRPPPISPGVWWSVLCRRPGPGS*LLHLSS
Trigger: CGATGAGAGGTGCAGGAGGCAGGAGCCTGGCCCAGG...ACGTCTGCACAGAACAGACCACCAGACGCCAGGGCTGATTGGTGGGGGCCTGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR GCA 90 bp CTCAGGCCCCCACCAATCAGCCCTGGCGTCTGGTGGTCTGTTCTGTGCAGACGTCCACGTAGACGCGGCTaGCGCAGGGCAGAGACGATC +
Preference number: 4 (lower is better)
Translates to: LRPPPISPGVWWSVLCRRPRRRG*RRAETI
Trigger: GATCGTCTCTGCCCTGCGGCAGCCGCGTCTACGTGG...ACGTCTGCACAGAACAGACCACCAGACGCCAGGGCTGATTGGTGGGGGCCTGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652521.1
CDS-3UTR GCA 90 bp CGCAAGTCTTGCGCAGGGAAGGAGGACGCTGGCCCTGTGAGGGCACGTGTTGGCGCTTCACAAGCCCCATaGAGCCAGCAGGCGACTCAC +
Preference number: 4 (lower is better)
Translates to: RKSCAGKEDAGPVRARVGASQAP*SQQATH
Trigger: GTGAGTCGCCTGCTGGCTGCATGGGGCTTGTGAAGC...GCCAACACGTGCCCTCACAGGGCCAGCGTCCTCCTTCCCTGCGCAAGACTTGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652521.1
CDS-3UTR GCA 90 bp CGGGGTCTCAGGCCCCCACCAATCAGCCCTGGCGTCTGGTGGTCTGTTCTGTGCTGCAGAGGTGGTGCGTaGAGCCACAGAGGACGTCAG +
Preference number: 4 (lower is better)
Translates to: RGLRPPPISPGVWWSVLCCRGGA*SHRGRQ
Trigger: CTGACGTCCTCTGTGGCTGCACGCACCACCTCTGCA...GCACAGAACAGACCACCAGACGCCAGGGCTGATTGGTGGGGGCCTGAGACCCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652521.1
CDS-3UTR GCA 90 bp AGAGGAGCCTGGGAAGCTTCTCGAAGGATGGAGGGCGCCCACCTCCTGGACCCCCCGTCGGAAGTGCAGTaGTCAGTCCAGGCTGTGCAG +
Preference number: 4 (lower is better)
Translates to: RGAWEASRRMEGAHLLDPPSEVQ*SVQAVQ
Trigger: CTGCACAGCCTGGACTGAGCACTGCACTTCCGACGG...GGGGTCCAGGAGGTGGGCGCCCTCCATCCTTCGAGAAGCTTCCCAGGCTCCTCT
64% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000652521.1
CDS-3UTR CCA 90 bp TCTCCAGCACCAGTGACGATGGCCTCCCCATCAGGGGACATTGCCAGGTACAGCAGGACACTGGGGAGCTaGCAGGCGTCAGGGTCCGCC +
Preference number: 4 (lower is better)
Translates to: SPAPVTMASPSGDIARYSRTLGS*QASGSA
Trigger: GGCGGACCCTGACGCCTGCCAGCTCCCCAGTGTCCT...GCTGTACCTGGCAATGTCCCCTGATGGGGAGGCCATCGTCACTGGTGCTGGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000591290.5
CDS-3UTR CCA 90 bp ATGCAAGCTGAGGAGCTGGGGTCCTCCGACTCTGGACAGCTGGTGTGGCACGGTGGTCTCCGTGCTTGCTaGGCGAGGACACTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: MQAEELGSSDSGQLVWHGGLRAC*ARTLGS
Trigger: GCTCCCCAGTGTCCTCGCCCAGCAAGCACGGAGACC...ACCGTGCCACACCAGCTGTCCAGAGTCGGAGGACCCCAGCTCCTCAGCTTGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CCA 90 bp CTGCTGAGGGTCCCCGACCACGTGCCCACCCCAGATACTGGTGGACATGGTTCACCGACGCGTGCCGTGTaGCCCTCCAACATGGACAGC +
Preference number: 4 (lower is better)
Translates to: LLRVPDHVPTPDTGGHGSPTRAV*PSNMDS
Trigger: GCTGTCCATGTTGGAGGGCCACACGGCACGCGTCGG...TGAACCATGTCCACCAGTATCTGGGGTGGGCACGTGGTCGGGGACCCTCAGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CCA 90 bp CGGGGTCTCAGGCCCCCACCAATCAGCCCTGGCGTCTGGTGGTCTGTTCTGTGCGAGGCGAGGAGCTGGTaGTCTGTGGACCACTTGAGC +
Preference number: 4 (lower is better)
Translates to: RGLRPPPISPGVWWSVLCEARSW*SVDHLS
Trigger: GCTCAAGTGGTCCACAGACCACCAGCTCCTCGCCTC...GCACAGAACAGACCACCAGACGCCAGGGCTGATTGGTGGGGGCCTGAGACCCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CCA 90 bp GGCATCCGTCGCTCTGAGTACAGACGGTCTGAGCCGGGACCGTCCAATGTGGTTCCGCGGTCCCTAATATaGCGGCGGTCGCTCCTCCGC +
Preference number: 4 (lower is better)
Translates to: GIRRSEYRRSEPGPSNVVPRSLI*RRSLLR
Trigger: GCGGAGGAGCGACCGCCGCCATATTAGGGACCGCGG...AACCACATTGGACGGTCCCGGCTCAGACCGTCTGTACTCAGAGCGACGGATGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR CCA 90 bp GAGTCCATGCAAGCTGAGGAGCTGGGGTCCTCCGACTCTGGACAGCTGGTGTGGCCGACTCTGGACAGCTaGTGTGGCACGGTCCTGCCC +
Preference number: 4 (lower is better)
Translates to: ESMQAEELGSSDSGQLVWPTLDS*CGTVLP
Trigger: GGGCAGGACCGTGCCACACCAGCTGTCCAGAGTCGG...CCACACCAGCTGTCCAGAGTCGGAGGACCCCAGCTCCTCAGCTTGCATGGACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CCA 90 bp AGAGGAGCCTGGGAAGCTTCTCGAAGGATGGAGGGCGCCCACCTCCTGGACCCCTGCAAGCTGAGGAGCTaGGGTCCTCCGACTCTGGAC +
Preference number: 4 (lower is better)
Translates to: RGAWEASRRMEGAHLLDPCKLRS*GPPTLD
Trigger: GTCCAGAGTCGGAGGACCCCAGCTCCTCAGCTTGCA...GGGGTCCAGGAGGTGGGCGCCCTCCATCCTTCGAGAAGCTTCCCAGGCTCCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CCA 90 bp GGCAACCGGGGTCTCAGGCCCCCACCAATCAGCCCTGGCGTCTGGTGGTCTGTTGTGGTTCTCGCCCTTTaGGAAGGGAGACAGAGCCCC +
Preference number: 4 (lower is better)
Translates to: GNRGLRPPPISPGVWWSVVVLAL*EGRQSP
Trigger: GGGGCTCTGTCTCCCTTCCCAAAGGGCGAGAACCAC...AACAGACCACCAGACGCCAGGGCTGATTGGTGGGGGCCTGAGACCCCGGTTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CCA 90 bp GTGAGCAGGTCCGGGTTCAGTTCTCCTGGGGTGATAAGTCCAGAGCAGACATCCGGCTGGCTCCGCCAGTaGCCCCGAGCCACCTGCCCA +
Preference number: 4 (lower is better)
Translates to: VSRSGFSSPGVISPEQTSGWLRQ*PRATCP
Trigger: TGGGCAGGTGGCTCGGGGCCACTGGCGGAGCCAGCC...GGATGTCTGCTCTGGACTTATCACCCCAGGAGAACTGAACCCGGACCTGCTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CCA 90 bp AGGAAGAGCATGCGGCTCCGGTGGGCAGGTGATGAACAGACGGAGGCAGTGAGGCTTGGATCCACAGGCTaGCTCCGCCAGTGGCCCCGA +
Preference number: 4 (lower is better)
Translates to: RKSMRLRWAGDEQTEAVRLGSTG*LRQWPR
Trigger: TCGGGGCCACTGGCGGAGCCAGCCTGTGGATCCAAG...CCTCACTGCCTCCGTCTGTTCATCACCTGCCCACCGGAGCCGCATGCTCTTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CCA 90 bp GAGGAGCCTGGGAAGCTTCTCGAAGGATGGAGGGCGCCCACCTCCTGGACCCCTTGTGAGGGTGACGCTTaGCCAGGATGCACAGGCCCA +
Preference number: 4 (lower is better)
Translates to: EEPGKLLEGWRAPTSWTPCEGDA*PGCTGP
Trigger: TGGGCCTGTGCATCCTGGCCAAGCGTCACCCTCACA...AGGGGTCCAGGAGGTGGGCGCCCTCCATCCTTCGAGAAGCTTCCCAGGCTCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CCA 90 bp GAGGAGCCTGGGAAGCTTCTCGAAGGATGGAGGGCGCCCACCTCCTGGACCCCTCACGGCTGTTGGCGCTaGTGGACAGGACAGGTGAAG +
Preference number: 4 (lower is better)
Translates to: EEPGKLLEGWRAPTSWTPHGCWR*WTGQVK
Trigger: CTTCACCTGTCCTGTCCACCAGCGCCAACAGCCGTG...AGGGGTCCAGGAGGTGGGCGCCCTCCATCCTTCGAGAAGCTTCCCAGGCTCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CCA 90 bp CTCAGGCCCCCACCAATCAGCCCTGGCGTCTGGTGGTCTGTTCTGTGCAGACGTAGGGCGCCCACCTCCTaGACCCCTTGGGTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: LRPPPISPGVWWSVLCRRRAPTS*TPWVSL
Trigger: CAAGGAGACCCAAGGGGTCCAGGAGGTGGGCGCCCT...ACGTCTGCACAGAACAGACCACCAGACGCCAGGGCTGATTGGTGGGGGCCTGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CCA 90 bp CGCAAGTCTTGCGCAGGGAAGGAGGACGCTGGCCCTGTGAGGGCACGTGTTGGCAAGCTTCTCGAAGGATaGAGGGCGCCCACCTCCTGG +
Preference number: 4 (lower is better)
Translates to: RKSCAGKEDAGPVRARVGKLLEG*RAPTSW
Trigger: CCAGGAGGTGGGCGCCCTCCATCCTTCGAGAAGCTT...GCCAACACGTGCCCTCACAGGGCCAGCGTCCTCCTTCCCTGCGCAAGACTTGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CCA 90 bp GCCATGAATGGGCAACCGGGGTCTCAGGCCCCCACCAATCAGCCCTGGCGTCTGAAGCTTCTCGAAGGATaGAGGGCGCCCACCTCCTGG +
Preference number: 4 (lower is better)
Translates to: AMNGQPGSQAPTNQPWRLKLLEG*RAPTSW
Trigger: CCAGGAGGTGGGCGCCCTCCATCCTTCGAGAAGCTT...CAGACGCCAGGGCTGATTGGTGGGGGCCTGAGACCCCGGTTGCCCATTCATGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CCA 90 bp CCTTGGCTTCCCCACGGCTGTTGGCGCTGGTGGACAGGACAGGTGAAGACACAGGACAAGGCGGCTCTTTaGCAACTGCGGGCAGGGGCG +
Preference number: 4 (lower is better)
Translates to: PWLPHGCWRWWTGQVKTQDKAAL*QLRAGA
Trigger: CGCCCCTGCCCGCAGTTGCCAAAGAGCCGCCTTGTC...CTGTGTCTTCACCTGTCCTGTCCACCAGCGCCAACAGCCGTGGGGAAGCCAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR CCA 90 bp CTGCTGAGGGTCCCCGACCACGTGCCCACCCCAGATACTGGTGGACATGGTTCACGCCCCAGGAAGCGATaGCCCCACTGGCCTTCGTCT +
Preference number: 4 (lower is better)
Translates to: LLRVPDHVPTPDTGGHGSRPRKR*PHWPSS
Trigger: AGACGAAGGCCAGTGGGGCCATCGCTTCCTGGGGCG...TGAACCATGTCCACCAGTATCTGGGGTGGGCACGTGGTCGGGGACCCTCAGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR CCA 90 bp CGCAAGTCTTGCGCAGGGAAGGAGGACGCTGGCCCTGTGAGGGCACGTGTTGGCCCTGCCTTTCCCATCTaGACACGCACCCAGGAGCTC +
Preference number: 4 (lower is better)
Translates to: RKSCAGKEDAGPVRARVGPAFPI*TRTQEL
Trigger: GAGCTCCTGGGTGCGTGTCCAGATGGGAAAGGCAGG...GCCAACACGTGCCCTCACAGGGCCAGCGTCCTCCTTCCCTGCGCAAGACTTGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR TCA 90 bp TCTCCAGCACCAGTGACGATGGCCTCCCCATCAGGGGACATTGCCAGGTACAGCGGTCTGTGGACCACTTaGGCCCGCACACCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: SPAPVTMASPSGDIARYSGLWTT*ARTPPA
Trigger: GGCAGGAGGTGTGCGGGCTCAAGTGGTCCACAGACC...GCTGTACCTGGCAATGTCCCCTGATGGGGAGGCCATCGTCACTGGTGCTGGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591290.5
CDS-3UTR TCA 90 bp CTGCTGAGGGTCCCCGACCACGTGCCCACCCCAGATACTGGTGGACATGGTTCACGTCTCCAGCACCAGTaGCGATGGCCTCCCCATCAG +
Preference number: 4 (lower is better)
Translates to: LLRVPDHVPTPDTGGHGSRLQHQ*RWPPHQ
Trigger: CTGATGGGGAGGCCATCGTCACTGGTGCTGGAGACG...TGAACCATGTCCACCAGTATCTGGGGTGGGCACGTGGTCGGGGACCCTCAGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR TCA 90 bp GACGGTCTGAGCCGGGACCGTCCAATGTGGTTCTCGCCCTTTGGGAAGGGAGACGCTGCAAGGATGCCGTaGAGCCCAGGTGGGGACTGT +
Preference number: 4 (lower is better)
Translates to: DGLSRDRPMWFSPFGKGDAARMP*SPGGDC
Trigger: ACAGTCCCCACCTGGGCTTCACGGCATCCTTGCAGC...GTCTCCCTTCCCAAAGGGCGAGAACCACATTGGACGGTCCCGGCTCAGACCGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR TCA 90 bp CGCTGGCCCTGTGAGGGCACGTGTTGGCGAATGCACGAAGACGTGGCATCTGTTCCATCTGAAGCCCACTaGCCGCCGGGCGATGGCCAT +
Preference number: 4 (lower is better)
Translates to: RWPCEGTCWRMHEDVASVPSEAH*PPGDGH
Trigger: ATGGCCATCGCCCGGCGGTCAGTGGGCTTCAGATGG...AACAGATGCCACGTCTTCGTGCATTCGCCAACACGTGCCCTCACAGGGCCAGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR TCA 90 bp GCCTACATGCCTTGGTCTGGCCTTGGGGCTGGTCTTGGGTTTGACATGGTGGGGATGCACAGGCCCATCTaGAGCCCACTGACCGCCGGG +
Preference number: 4 (lower is better)
Translates to: AYMPWSGLGAGLGFDMVGMHRPI*SPLTAG
Trigger: CCCGGCGGTCAGTGGGCTTCAGATGGGCCTGTGCAT...CCCCACCATGTCAAACCCAAGACCAGCCCCAAGGCCAGACCAAGGCATGTAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR TCA 90 bp CGCCCCACCCAGACAGAGGTGGGGAGAGTCTCTCCAGTGAATGTGGAAGATCGAGAGCCAGCCAAGCCCTaGCGCCCACAGCGACAAGGC +
Preference number: 4 (lower is better)
Translates to: RPTQTEVGRVSPVNVEDREPAKP*RPQRQG
Trigger: GCCTTGTCGCTGTGGGCGTCAGGGCTTGGCTGGCTC...TCGATCTTCCACATTCACTGGAGAGACTCTCCCCACCTCTGTCTGGGTGGGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR GCA 90 bp CATTGCCAGGTACAGCACGCGGTAGGAGTGCCCGGTCAGCTTGGCCACCTGGGTAGGCCAGGCCGTCTTTaGCGTTGTCTGAGGTGGCGT +
Preference number: 4 (lower is better)
Translates to: HCQVQHAVGVPGQLGHLGRPGRL*RCLRWR
Trigger: ACGCCACCTCAGACAACGGCAAAGACGGCCTGGCCT...ACCCAGGTGGCCAAGCTGACCGGGCACTCCTACCGCGTGCTGTACCTGGCAATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591290.5
CDS-3UTR GCA 90 bp ACCGGGGTCTCAGGCCCCCACCAATCAGCCCTGGCGTCTGGTGGTCTGTTCTGTAGGCCAGGCCGTCTTTaGCGTTGTCTGAGGTGGCGT +
Preference number: 4 (lower is better)
Translates to: TGVSGPHQSALASGGLFCRPGRL*RCLRWR
Trigger: ACGCCACCTCAGACAACGGCAAAGACGGCCTGGCCT...ACAGAACAGACCACCAGACGCCAGGGCTGATTGGTGGGGGCCTGAGACCCCGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR GCA 90 bp ACATTGCCAGGTACAGCACGCGGTAGGAGTGCCCGGTCAGCTTGGCCACCTGGGCCTGCACCTTCTCGATaGCGGCACCCAGCAGCTCAT +
Preference number: 4 (lower is better)
Translates to: TLPGTARGRSARSAWPPGPAPSR*RHPAAH
Trigger: ATGAGCTGCTGGGTGCCGGCATCGAGAAGGTGCAGG...CCCAGGTGGCCAAGCTGACCGGGCACTCCTACCGCGTGCTGTACCTGGCAATGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591290.5
CDS-3UTR GCA 90 bp TCCAGCACCAGTGACGATGGCCTCCCCATCAGGGGACATTGCCAGGTACAGCACTGGAGGGCTGCAGCCTaGGGTCCTCAGTCTGCGGGT +
Preference number: 4 (lower is better)
Translates to: SSTSDDGLPIRGHCQVQHWRAAA*GPQSAG
Trigger: ACCCGCAGACTGAGGACCGCAGGCTGCAGCCCTCCA...GTGCTGTACCTGGCAATGTCCCCTGATGGGGAGGCCATCGTCACTGGTGCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591290.5
CDS-3UTR GCA 90 bp GGCATCCGTCGCTCTGAGTACAGACGGTCTGAGCCGGGACCGTCCAATGTGGTTTGGAGGGCTGCAGCCTaGGGTCCTCAGTCTGCGGGT +
Preference number: 4 (lower is better)
Translates to: GIRRSEYRRSEPGPSNVVWRAAA*GPQSAG
Trigger: ACCCGCAGACTGAGGACCGCAGGCTGCAGCCCTCCA...AACCACATTGGACGGTCCCGGCTCAGACCGTCTGTACTCAGAGCGACGGATGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR GCA 90 bp ACATGCCTTGGTCTGGCCTTGGGGCTGGTCTTGGGTTTGACATGGTGGGGTGCACAGCGCCCCGACGCGTaGCGTGTGGCCCTCCAACAT +
Preference number: 4 (lower is better)
Translates to: TCLGLALGLVLGLTWWGAQRPDA*RVALQH
Trigger: ATGTTGGAGGGCCACACGGCACGCGTCGGGGCGCTG...TGCACCCCACCATGTCAAACCCAAGACCAGCCCCAAGGCCAGACCAAGGCATGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR GCA 90 bp GGGGTGATAAGTCCAGAGCAGACATCCTCCTCCAGTGTGAGGGTGACGCTTGGCCCCTCTGCAGGATCATaGGGTCGCGGCTCCCGGACG +
Preference number: 4 (lower is better)
Translates to: GVISPEQTSSSSVRVTLGPSAGS*GRGSRT
Trigger: CGTCCGGGAGCCGCGACCGCATGATCCTGCAGAGGG...GCCAAGCGTCACCCTCACACTGGAGGAGGATGTCTGCTCTGGACTTATCACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR GCA 90 bp GACGGTCTGAGCCGGGACCGTCCAATGTGGTTCTCGCCCTTTGGGAAGGGAGACACTGCAGTGGCGGGGTaGGGATGTCCCTCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: DGLSRDRPMWFSPFGKGDTAVAG*GCPSAG
Trigger: TCCTGCAGAGGGACATCCGCACCCCGCCACTGCAGT...GTCTCCCTTCCCAAAGGGCGAGAACCACATTGGACGGTCCCGGCTCAGACCGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR GCA 90 bp TCTGTTCTGTGCAGACGTGGGCAGTTCCAGGAAGAGCATGCGGCTCCGGTGGGCAGGTGCTCCGTGTACTaGTGCACGGGGCTCAGGCTC +
Preference number: 4 (lower is better)
Translates to: SVLCRRGQFQEEHAAPVGRCSVY*CTGLRL
Trigger: GAGCCTGAGCCCCGTGCAGCAGTACACGGAGCACCT...GCCCACCGGAGCCGCATGCTCTTCCTGGAACTGCCCACGTCTGCACAGAACAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR GCA 90 bp CGGGGTCTCAGGCCCCCACCAATCAGCCCTGGCGTCTGGTGGTCTGTTCTGTGCTGGACCAGGCCAGATTaGACACTTGGGAGCCCGTGT +
Preference number: 4 (lower is better)
Translates to: RGLRPPPISPGVWWSVLCWTRPD*TLGSPC
Trigger: ACACGGGCTCCCAAGTGTGCAATCTGGCCTGGTCCA...GCACAGAACAGACCACCAGACGCCAGGGCTGATTGGTGGGGGCCTGAGACCCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR GCA 90 bp GAGGAGCCTGGGAAGCTTCTCGAAGGATGGAGGGCGCCCACCTCCTGGACCCCTACCAGCTCGTTGGCGTaGTTGGACCAGGCCAGATTG +
Preference number: 4 (lower is better)
Translates to: EEPGKLLEGWRAPTSWTPTSSLA*LDQARL
Trigger: CAATCTGGCCTGGTCCAAGCACGCCAACGAGCTGGT...AGGGGTCCAGGAGGTGGGCGCCCTCCATCCTTCGAGAAGCTTCCCAGGCTCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR GCA 90 bp CCTTGGCTTCCCCACGGCTGTTGGCGCTGGTGGACAGGACAGGTGAAGACACAGGGTGTGGCACGGTCCTaGCCGGCAGGTTTACCGGAT +
Preference number: 4 (lower is better)
Translates to: PWLPHGCWRWWTGQVKTQGVARS*PAGLPD
Trigger: ATCCGGTAAACCTGCCGGGCAGGACCGTGCCACACC...CTGTGTCTTCACCTGTCCTGTCCACCAGCGCCAACAGCCGTGGGGAAGCCAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR GCA 90 bp TCTGTTCTGTGCAGACGTGGGCAGTTCCAGGAAGAGCATGCGGCTCCGGTGGGCGGTGTGGCACGGTCCTaGCCGGCAGGTTTACCGGAT +
Preference number: 4 (lower is better)
Translates to: SVLCRRGQFQEEHAAPVGGVARS*PAGLPD
Trigger: ATCCGGTAAACCTGCCGGGCAGGACCGTGCCACACC...GCCCACCGGAGCCGCATGCTCTTCCTGGAACTGCCCACGTCTGCACAGAACAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR GCA 90 bp GCCTACATGCCTTGGTCTGGCCTTGGGGCTGGTCTTGGGTTTGACATGGTGGGGGGGTCCCCGACCACGTaGCCACCCCAGATACTGGTG +
Preference number: 4 (lower is better)
Translates to: AYMPWSGLGAGLGFDMVGGSPTT*PPQILV
Trigger: CACCAGTATCTGGGGTGGGCACGTGGTCGGGGACCC...CCCCACCATGTCAAACCCAAGACCAGCCCCAAGGCCAGACCAAGGCATGTAGGC
63% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR GCA 90 bp GAGGGTCCCCGACCACGTGCCCACCCCAGATACTGGTGGACATGGTTCACAATCTGGCCCCGAGCCACCTaGCCAGGCCTACATGCCTTG +
Preference number: 4 (lower is better)
Translates to: EGPRPRAHPRYWWTWFTIWPRAT*PGLHAL
Trigger: CAAGGCATGTAGGCCTGGGCAGGTGGCTCGGGGCCA...GATTGTGAACCATGTCCACCAGTATCTGGGGTGGGCACGTGGTCGGGGACCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR GCA 90 bp CTGCTGAGGGTCCCCGACCACGTGCCCACCCCAGATACTGGTGGACATGGTTCAAGGTGGCTGCAAGGATaGCGTGAAGCCCAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: LLRVPDHVPTPDTGGHGSRWLQG*REAQVG
Trigger: CCCCACCTGGGCTTCACGGCATCCTTGCAGCCACCT...TGAACCATGTCCACCAGTATCTGGGGTGGGCACGTGGTCGGGGACCCTCAGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR GCA 90 bp GAAGACGTGGCATCTGTTGTGCTCCTCTCCAGCCAGGGCAGTGAGCAGGTCCGGGGGGGACGCAAGTCTTaGGCAGGGAAGGAGGACGCT +
Preference number: 4 (lower is better)
Translates to: EDVASVVLLSSQGSEQVRGGRKS*AGKEDA
Trigger: AGCGTCCTCCTTCCCTGCGCAAGACTTGCGTCCCCC...CCGGACCTGCTCACTGCCCTGGCTGGAGAGGAGCACAACAGATGCCACGTCTTC
63% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR GCA 90 bp GCCATGAATGGGCAACCGGGGTCTCAGGCCCCCACCAATCAGCCCTGGCGTCTGCTCAGAAGCTGCTTCTaGAGCTCCAGGGCCAGATGG +
Preference number: 4 (lower is better)
Translates to: AMNGQPGSQAPTNQPWRLLRSCF*SSRARW
Trigger: CCATCTGGCCCTGGAGCTGCAGAAGCAGCTTCTGAG...CAGACGCCAGGGCTGATTGGTGGGGGCCTGAGACCCCGGTTGCCCATTCATGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR GCA 90 bp GGCATCCGTCGCTCTGAGTACAGACGGTCTGAGCCGGGACCGTCCAATGTGGTTGCTGAGTGGCCCCCGTaGCCCGCAAAGCCTGACGTA +
Preference number: 4 (lower is better)
Translates to: GIRRSEYRRSEPGPSNVVAEWPP*PAKPDV
Trigger: TACGTCAGGCTTTGCGGGGCACGGGGGCCACTCAGC...AACCACATTGGACGGTCCCGGCTCAGACCGTCTGTACTCAGAGCGACGGATGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR GCA 90 bp GACGGTCTGAGCCGGGACCGTCCAATGTGGTTCTCGCCCTTTGGGAAGGGAGACCCACTGGCCTTCGTCTaGCTGTCGGGTGGAGCTGAC +
Preference number: 4 (lower is better)
Translates to: DGLSRDRPMWFSPFGKGDPLAFV*LSGGAD
Trigger: GTCAGCTCCACCCGACAGGCAGACGAAGGCCAGTGG...GTCTCCCTTCCCAAAGGGCGAGAACCACATTGGACGGTCCCGGCTCAGACCGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR GCA 90 bp AGGAAGAGCATGCGGCTCCGGTGGGCAGGTGATGAACAGACGGAGGCAGTGAGGAGAGACGATCCGGACTaGCAGGGGCGTAGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: RKSMRLRWAGDEQTEAVRRDDPD*QGRRVL
Trigger: CAGGACCCTACGCCCCTGGCAGTCCGGATCGTCTCT...CCTCACTGCCTCCGTCTGTTCATCACCTGCCCACCGGAGCCGCATGCTCTTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652521.1
CDS-3UTR GCA 90 bp CTCAGGCCCCCACCAATCAGCCCTGGCGTCTGGTGGTCTGTTCTGTGCAGACGTGCTGTGCAGAGGTGGTaGGTGCAGCCACAGAGGACG +
Preference number: 4 (lower is better)
Translates to: LRPPPISPGVWWSVLCRRAVQRW*VQPQRT
Trigger: CGTCCTCTGTGGCTGCACGCACCACCTCTGCACAGC...ACGTCTGCACAGAACAGACCACCAGACGCCAGGGCTGATTGGTGGGGGCCTGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652521.1
CDS-3UTR CCA 90 bp TGCCAGGTACAGCACGCGGTAGGAGTGCCCGGTCAGCTTGGCCACCTGGGTCAGTTCTGGATGACGATCTaGCGAAGCAGGCGCCGCTCA +
Preference number: 4 (lower is better)
Translates to: CQVQHAVGVPGQLGHLGQFWMTI*RSRRRS
Trigger: TGAGCGGCGCCTGCTTCGCCAGATCGTCATCCAGAA...CTGACCCAGGTGGCCAAGCTGACCGGGCACTCCTACCGCGTGCTGTACCTGGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591290.5
CDS-3UTR CCA 90 bp CTCAGGCCCCCACCAATCAGCCCTGGCGTCTGGTGGTCTGTTCTGTGCAGACGTCCTTCTTCTCAGGCGTaGAGGGCTGCAGCCTGCGGT +
Preference number: 4 (lower is better)
Translates to: LRPPPISPGVWWSVLCRRPSSQA*RAAACG
Trigger: ACCGCAGGCTGCAGCCCTCCACGCCTGAGAAGAAGG...ACGTCTGCACAGAACAGACCACCAGACGCCAGGGCTGATTGGTGGGGGCCTGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CCA 90 bp ACCAGTGACGATGGCCTCCCCATCAGGGGACATTGCCAGGTACAGCACGCGGTACCGACGCGTGCCGTGTaGCCCTCCAACATGGACAGC +
Preference number: 4 (lower is better)
Translates to: TSDDGLPIRGHCQVQHAVPTRAV*PSNMDS
Trigger: GCTGTCCATGTTGGAGGGCCACACGGCACGCGTCGG...TACCGCGTGCTGTACCTGGCAATGTCCCCTGATGGGGAGGCCATCGTCACTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591290.5
CDS-3UTR CCA 90 bp TCAGCTGTCCTGGGCCATGGGGAACCAATTCCCCCATTTCTACACGAGCCCTGGCCGCTCCGACTGCAGTaGCGGGGTGCGGATGTCCCT +
Preference number: 4 (lower is better)
Translates to: SAVLGHGEPIPPFLHEPWPLRLQ*RGADVP
Trigger: AGGGACATCCGCACCCCGCCACTGCAGTCGGAGCGG...CCAGGGCTCGTGTAGAAATGGGGGAATTGGTTCCCCATGGCCCAGGACAGCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR CCA 90 bp CGGGTTTTGCTAAAGACGTTCCAGAACCTCAGGGTCTCGTCTCCAGCACCAGTGCACACCTCCTGCCGGTaGCCCTGCAGCCGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: RVLLKTFQNLRVSSPAPVHTSCR*PCSRRS
Trigger: GGAGCGGCGGCTGCAGGGCCACCGGCAGGAGGTGTG...CACTGGTGCTGGAGACGAGACCCTGAGGTTCTGGAACGTCTTTAGCAAAACCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591290.5
CDS-3UTR CCA 90 bp ACCGGGGTCTCAGGCCCCCACCAATCAGCCCTGGCGTCTGGTGGTCTGTTCTGTGTCAGCTTGGCCACCTaGGTCAGGGAGGGGTACTTC +
Preference number: 4 (lower is better)
Translates to: TGVSGPHQSALASGGLFCVSLAT*VREGYF
Trigger: GAAGTACCCCTCCCTGACCCAGGTGGCCAAGCTGAC...ACAGAACAGACCACCAGACGCCAGGGCTGATTGGTGGGGGCCTGAGACCCCGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CCA 90 bp CTCAGGGTCTCGTCTCCAGCACCAGTGACGATGGCCTCCCCATCAGGGGACATTAGTGCCCGGTCAGCTTaGCCACCTGGGTCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: LRVSSPAPVTMASPSGDISARSA*PPGSGR
Trigger: CCTCCCTGACCCAGGTGGCCAAGCTGACCGGGCACT...AATGTCCCCTGATGGGGAGGCCATCGTCACTGGTGCTGGAGACGAGACCCTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591290.5
CDS-3UTR CCA 90 bp CTCCTGGACCCCTTGGGTCTCCTTGGCTTCCCCACGGCTGTTGGCGCTGGTGGACGGGACCGTCCAATGTaGTTCTCGCCCTTTGGGAAG +
Preference number: 4 (lower is better)
Translates to: LLDPLGLLGFPTAVGAGGRDRPM*FSPFGK
Trigger: CTTCCCAAAGGGCGAGAACCACATTGGACGGTCCCG...TCCACCAGCGCCAACAGCCGTGGGGAAGCCAAGGAGACCCAAGGGGTCCAGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CCA 90 bp CTCCTGGACCCCTTGGGTCTCCTTGGCTTCCCCACGGCTGTTGGCGCTGGTGGAAGCCCTGGCGTCTGGTaGTCTGTTCTGTGCAGACGT +
Preference number: 4 (lower is better)
Translates to: LLDPLGLLGFPTAVGAGGSPGVW*SVLCRR
Trigger: ACGTCTGCACAGAACAGACCACCAGACGCCAGGGCT...TCCACCAGCGCCAACAGCCGTGGGGAAGCCAAGGAGACCCAAGGGGTCCAGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CCA 90 bp GCCATGAATGGGCAACCGGGGTCTCAGGCCCCCACCAATCAGCCCTGGCGTCTGAGCCCTGGCGTCTGGTaGTCTGTTCTGTGCAGACGT +
Preference number: 4 (lower is better)
Translates to: AMNGQPGSQAPTNQPWRLSPGVW*SVLCRR
Trigger: ACGTCTGCACAGAACAGACCACCAGACGCCAGGGCT...CAGACGCCAGGGCTGATTGGTGGGGGCCTGAGACCCCGGTTGCCCATTCATGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CCA 90 bp CGCAAGTCTTGCGCAGGGAAGGAGGACGCTGGCCCTGTGAGGGCACGTGTTGGCCCCACCAATCAGCCCTaGCGTCTGGTGGTCTGTTCT +
Preference number: 4 (lower is better)
Translates to: RKSCAGKEDAGPVRARVGPTNQP*RLVVCS
Trigger: AGAACAGACCACCAGACGCCAGGGCTGATTGGTGGG...GCCAACACGTGCCCTCACAGGGCCAGCGTCCTCCTTCCCTGCGCAAGACTTGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CCA 90 bp TGCAAGCTGAGGAGCTGGGGTCCTCCGACTCTGGACAGCTGGTGTGGCACGGTCGTGGGGACTGTCTCTTaGATCCACAGGCTGGCTCCG +
Preference number: 4 (lower is better)
Translates to: CKLRSWGPPTLDSWCGTVVGTVS*IHRLAP
Trigger: CGGAGCCAGCCTGTGGATCCAAGAGACAGTCCCCAC...GACCGTGCCACACCAGCTGTCCAGAGTCGGAGGACCCCAGCTCCTCAGCTTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CCA 90 bp ATGCAAGCTGAGGAGCTGGGGTCCTCCGACTCTGGACAGCTGGTGTGGCACGGTAGGGAAGGAGGACGCTaGCCCTGTGAGGGCACGTGT +
Preference number: 4 (lower is better)
Translates to: MQAEELGSSDSGQLVWHGREGGR*PCEGTC
Trigger: ACACGTGCCCTCACAGGGCCAGCGTCCTCCTTCCCT...ACCGTGCCACACCAGCTGTCCAGAGTCGGAGGACCCCAGCTCCTCAGCTTGCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CCA 90 bp GTGAGCAGGTCCGGGTTCAGTTCTCCTGGGGTGATAAGTCCAGAGCAGACATCCAAGACACAGGCAGCCTaGGGGCGGGGGCCACACCGC +
Preference number: 4 (lower is better)
Translates to: VSRSGFSSPGVISPEQTSKTQAA*GRGPHR
Trigger: GCGGTGTGGCCCCCGCCCCCAGGCTGCCTGTGTCTT...GGATGTCTGCTCTGGACTTATCACCCCAGGAGAACTGAACCCGGACCTGCTCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CCA 90 bp TCAGGCCCCCACCAATCAGCCCTGGCGTCTGGTGGTCTGTTCTGTGCAGACGTGCCCCTTGGGTCTCCTTaGCTTCCCCACGGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: SGPHQSALASGGLFCADVPLGSP*LPHGCW
Trigger: CCAACAGCCGTGGGGAAGCCAAGGAGACCCAAGGGG...CACGTCTGCACAGAACAGACCACCAGACGCCAGGGCTGATTGGTGGGGGCCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CCA 90 bp GACGGTCTGAGCCGGGACCGTCCAATGTGGTTCTCGCCCTTTGGGAAGGGAGACAGCCTCAAAACCACCTaGGGCCTCCTGGCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: DGLSRDRPMWFSPFGKGDSLKTT*GLLAAR
Trigger: CCTGGCAGCCAGGAGGCCCCAGGTGGTTTTGAGGCT...GTCTCCCTTCCCAAAGGGCGAGAACCACATTGGACGGTCCCGGCTCAGACCGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR CCA 90 bp GTGATAAGTCCAGAGCAGACATCCTCCTCCAGTGTGAGGGTGACGCTTGGCCAGGCGGAGCCTGCACCCTaGTCTCCGCTTCCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: VISPEQTSSSSVRVTLGQAEPAP*SPLPLP
Trigger: GGGCAGGGGAAGCGGAGACCAGGGTGCAGGCTCCGC...CTGGCCAAGCGTCACCCTCACACTGGAGGAGGATGTCTGCTCTGGACTTATCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR CCA 90 bp GCCATGAATGGGCAACCGGGGTCTCAGGCCCCCACCAATCAGCCCTGGCGTCTGAGAGGACGTCAGCTGTaGCCATGGTTGGGGAGGACA +
Preference number: 4 (lower is better)
Translates to: AMNGQPGSQAPTNQPWRLRGRQL*PWLGRT
Trigger: TGTCCTCCCCAACCATGGCCACAGCTGACGTCCTCT...CAGACGCCAGGGCTGATTGGTGGGGGCCTGAGACCCCGGTTGCCCATTCATGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000652521.1
CDS-3UTR TCA 90 bp AGAGGAGCCTGGGAAGCTTCTCGAAGGATGGAGGGCGCCCACCTCCTGGACCCCGTCTTTGCCGTTGTCTaGGGTGGCGTCCTTGGCTTT +
Preference number: 4 (lower is better)
Translates to: RGAWEASRRMEGAHLLDPVFAVV*GGVLGF
Trigger: AAAGCCAAGGACGCCACCTCAGACAACGGCAAAGAC...GGGGTCCAGGAGGTGGGCGCCCTCCATCCTTCGAGAAGCTTCCCAGGCTCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR TCA 90 bp TGGGGACTGTCTCTTGGATCCACAGGCTGGCTCCGCCAGTGGCCCCGAGCCACCACCAGTCCACCAGATTaGGGTAGAAGTCGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: WGLSLGSTGWLRQWPRATTSPPD*GRSRPA
Trigger: TGCAGGACGACTTCTACCTCAATCTGGTGGACTGGT...GGTGGCTCGGGGCCACTGGCGGAGCCAGCCTGTGGATCCAAGAGACAGTCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR TCA 90 bp TCAGGCCCCCACCAATCAGCCCTGGCGTCTGGTGGTCTGTTCTGTGCAGACGTGAGAGTCCATGCAAGCTaGGGAGCTGGGGTCCTCCGA +
Preference number: 4 (lower is better)
Translates to: SGPHQSALASGGLFCADVRVHAS*GAGVLR
Trigger: TCGGAGGACCCCAGCTCCTCAGCTTGCATGGACTCT...CACGTCTGCACAGAACAGACCACCAGACGCCAGGGCTGATTGGTGGGGGCCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR TCA 90 bp CATAAGCTTCTCTGTCTCTGGGCTGTGTCCCCCATGCCAGCTCCACATGGGCCAGGTGGGGTGCAGCCATaGATGGGCAACCGGGGTCTC +
Preference number: 4 (lower is better)
Translates to: HKLLCLWAVSPMPAPHGPGGVQP*MGNRGL
Trigger: GAGACCCCGGTTGCCCATTCATGGCTGCACCCCACC...TGGCCCATGTGGAGCTGGCATGGGGGACACAGCCCAGAGACAGAGAAGCTTATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR TCA 90 bp TCTGTTCTGTGCAGACGTGGGCAGTTCCAGGAAGAGCATGCGGCTCCGGTGGGCGGCTGGTCTTGGGTTTaGCATGGTGGGGTGCAGCCA +
Preference number: 4 (lower is better)
Translates to: SVLCRRGQFQEEHAAPVGGWSWV*HGGVQP
Trigger: TGGCTGCACCCCACCATGTCAAACCCAAGACCAGCC...GCCCACCGGAGCCGCATGCTCTTCCTGGAACTGCCCACGTCTGCACAGAACAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR TCA 90 bp CGCAAGTCTTGCGCAGGGAAGGAGGACGCTGGCCCTGTGAGGGCACGTGTTGGCGGAGAGTCTCTCCAGTaGATGTGGAAGATCGACCCG +
Preference number: 4 (lower is better)
Translates to: RKSCAGKEDAGPVRARVGGESLQ*MWKIDP
Trigger: CGGGTCGATCTTCCACATTCACTGGAGAGACTCTCC...GCCAACACGTGCCCTCACAGGGCCAGCGTCCTCCTTCCCTGCGCAAGACTTGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR TCA 90 bp GGGGTGATAAGTCCAGAGCAGACATCCTCCTCCAGTGTGAGGGTGACGCTTGGCCCCACCCTCCCTCCCTaGTGGTGTCAACCGAGCACC +
Preference number: 4 (lower is better)
Translates to: GVISPEQTSSSSVRVTLGPTLPP*WCQPST
Trigger: GGTGCTCGGTTGACACCATCAGGGAGGGAGGGTGGG...GCCAAGCGTCACCCTCACACTGGAGGAGGATGTCTGCTCTGGACTTATCACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR GCA 90 bp TCTGTTCTGTGCAGACGTGGGCAGTTCCAGGAAGAGCATGCGGCTCCGGTGGGCCCTGCACCTTCTCGATaGCGGCACCCAGCAGCTCAT +
Preference number: 4 (lower is better)
Translates to: SVLCRRGQFQEEHAAPVGPAPSR*RHPAAH
Trigger: ATGAGCTGCTGGGTGCCGGCATCGAGAAGGTGCAGG...GCCCACCGGAGCCGCATGCTCTTCCTGGAACTGCCCACGTCTGCACAGAACAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR GCA 90 bp CCAGCACCAGTGACGATGGCCTCCCCATCAGGGGACATTGCCAGGTACAGCACGTCAGTCTGCGGGTCCTaGACCTTCTCGATGCCGGCA +
Preference number: 4 (lower is better)
Translates to: PAPVTMASPSGDIARYSTSVCGS*TFSMPA
Trigger: TGCCGGCATCGAGAAGGTGCAGGACCCGCAGACTGA...CGTGCTGTACCTGGCAATGTCCCCTGATGGGGAGGCCATCGTCACTGGTGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591290.5
CDS-3UTR GCA 90 bp TCTGTTCTGTGCAGACGTGGGCAGTTCCAGGAAGAGCATGCGGCTCCGGTGGGCTCAGTCTGCGGGTCCTaGACCTTCTCGATGCCGGCA +
Preference number: 4 (lower is better)
Translates to: SVLCRRGQFQEEHAAPVGSVCGS*TFSMPA
Trigger: TGCCGGCATCGAGAAGGTGCAGGACCCGCAGACTGA...GCCCACCGGAGCCGCATGCTCTTCCTGGAACTGCCCACGTCTGCACAGAACAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR GCA 90 bp TCCTGGGCCATGGGGAACCAATTCCCCCATTTCTACACGAGCCCTGGCCCATCATCAGGCGTGGAGGGCTaGAGCCTGCGGTCCTCAGTC +
Preference number: 4 (lower is better)
Translates to: SWAMGNQFPHFYTSPGPSSGVEG*SLRSSV
Trigger: GACTGAGGACCGCAGGCTGCAGCCCTCCACGCCTGA...TGATGGGCCAGGGCTCGTGTAGAAATGGGGGAATTGGTTCCCCATGGCCCAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR GCA 90 bp TCTCCAGCACCAGTGACGATGGCCTCCCCATCAGGGGACATTGCCAGGTACAGCCGAAGCCCTTGTGTGTaGCCACCGCCACCAGGTTCC +
Preference number: 4 (lower is better)
Translates to: SPAPVTMASPSGDIARYSRSPCV*PPPPGS
Trigger: GGAACCTGGTGGCGGTGGGCACACACAAGGGCTTCG...GCTGTACCTGGCAATGTCCCCTGATGGGGAGGCCATCGTCACTGGTGCTGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591290.5
CDS-3UTR GCA 90 bp GACGTGGGCAGTTCCAGGAAGAGCATGCGGCTCCGGTGGGCAGGTGATGAACAGGGACAGCTTCTTCCCTaGGGCTGCGTCCCAGATCTG +
Preference number: 4 (lower is better)
Translates to: DVGSSRKSMRLRWAGDEQGQLLP*GCVPDL
Trigger: CAGATCTGGGACGCAGCCGCAGGGAAGAAGCTGTCC...CTGTTCATCACCTGCCCACCGGAGCCGCATGCTCTTCCTGGAACTGCCCACGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR GCA 90 bp GGCATCCGTCGCTCTGAGTACAGACGGTCTGAGCCGGGACCGTCCAATGTGGTTTGCTCCGTGTACTGCTaGACGGGGCTCAGGCTCGAG +
Preference number: 4 (lower is better)
Translates to: GIRRSEYRRSEPGPSNVVCSVYC*TGLRLE
Trigger: CTCGAGCCTGAGCCCCGTGCAGCAGTACACGGAGCA...AACCACATTGGACGGTCCCGGCTCAGACCGTCTGTACTCAGAGCGACGGATGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR GCA 90 bp GCCATGAATGGGCAACCGGGGTCTCAGGCCCCCACCAATCAGCCCTGGCGTCTGCCCGTGTCGATACACTaGAGTGGTTGTCCTGTCAGC +
Preference number: 4 (lower is better)
Translates to: AMNGQPGSQAPTNQPWRLPVSIH*SGCPVS
Trigger: GCTGACAGGACAACCACTGCAGTGTATCGACACGGG...CAGACGCCAGGGCTGATTGGTGGGGGCCTGAGACCCCGGTTGCCCATTCATGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR GCA 90 bp AGGAAGAGCATGCGGCTCCGGTGGGCAGGTGATGAACAGACGGAGGCAGTGAGGGTGAGTAGCCGTGCGTaGTCACCAGCTCGTTGGCGT +
Preference number: 4 (lower is better)
Translates to: RKSMRLRWAGDEQTEAVRVSSRA*SPARWR
Trigger: ACGCCAACGAGCTGGTGAGCACGCACGGCTACTCAC...CCTCACTGCCTCCGTCTGTTCATCACCTGCCCACCGGAGCCGCATGCTCTTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR GCA 90 bp CCAGAACCTCAGGGTCTCGTCTCCAGCACCAGTGACGATGGCCTCCCCATCAGGAGGGAGACACATCGTTaGCGTCATCGGGGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: PEPQGLVSSTSDDGLPIRRETHR*RHRGWS
Trigger: GCTCCAGCCCCGATGACGGCAACGATGTGTCTCCCT...CCTGATGGGGAGGCCATCGTCACTGGTGCTGGAGACGAGACCCTGAGGTTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591290.5
CDS-3UTR GCA 90 bp CTGCTGAGGGTCCCCGACCACGTGCCCACCCCAGATACTGGTGGACATGGTTCAAGGGAGACACATCGTTaGCGTCATCGGGGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: LLRVPDHVPTPDTGGHGSRETHR*RHRGWS
Trigger: GCTCCAGCCCCGATGACGGCAACGATGTGTCTCCCT...TGAACCATGTCCACCAGTATCTGGGGTGGGCACGTGGTCGGGGACCCTCAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR GCA 90 bp GAGGGTCCCCGACCACGTGCCCACCCCAGATACTGGTGGACATGGTTCACAATCGTTCCAGGAAGAGCATaGGGCTCCGGTGGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: EGPRPRAHPRYWWTWFTIVPGRA*GSGGQV
Trigger: CACCTGCCCACCGGAGCCGCATGCTCTTCCTGGAAC...GATTGTGAACCATGTCCACCAGTATCTGGGGTGGGCACGTGGTCGGGGACCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR GCA 90 bp CCAATTCCCCCATTTCTACACGAGCCCTGGCCCATCATCATGGGACCCTCCCACTGGCCCCGAGCCACCTaGCCAGGCCTACATGCCTTG +
Preference number: 4 (lower is better)
Translates to: PIPPFLHEPWPIIMGPSHWPRAT*PGLHAL
Trigger: CAAGGCATGTAGGCCTGGGCAGGTGGCTCGGGGCCA...GTGGGAGGGTCCCATGATGATGGGCCAGGGCTCGTGTAGAAATGGGGGAATTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR GCA 90 bp TCAGCTGTCCTGGGCCATGGGGAACCAATTCCCCCATTTCTACACGAGCCCTGGGCCTCCCTCCCTGCCTaGTGTGCAGCCTGGGAGCAT +
Preference number: 4 (lower is better)
Translates to: SAVLGHGEPIPPFLHEPWASLPA*CAAWEH
Trigger: ATGCTCCCAGGCTGCACAGCAGGCAGGGAGGGAGGC...CCAGGGCTCGTGTAGAAATGGGGGAATTGGTTCCCCATGGCCCAGGACAGCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR GCA 90 bp GAGGAGCCTGGGAAGCTTCTCGAAGGATGGAGGGCGCCCACCTCCTGGACCCCTTTTCATCATCTCCAATaGCCAGGATGGGGCCTGCCC +
Preference number: 4 (lower is better)
Translates to: EEPGKLLEGWRAPTSWTPFHHLQ*PGWGLP
Trigger: GGGCAGGCCCCATCCTGGGCATTGGAGATGATGAAA...AGGGGTCCAGGAGGTGGGCGCCCTCCATCCTTCGAGAAGCTTCCCAGGCTCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR GCA 90 bp CAGCCTGGGAGCATGAGACAGAGAAGCAGAGGAGCCTGGGAAGCTTCTCGAAGGAGGCCCTGCACGCCCTaGCCTCCTCTCCTCACTCTG +
Preference number: 4 (lower is better)
Translates to: QPGSMRQRSRGAWEASRRRPCTP*PPLLTL
Trigger: CAGAGTGAGGAGAGGAGGGCAGGGCGTGCAGGGCCT...CCTTCGAGAAGCTTCCCAGGCTCCTCTGCTTCTCTGTCTCATGCTCCCAGGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR CCA 90 bp GATGCTTCCAGAGAGACTGCTGCTTCGAGCAGTGACAGCAGAGGTGGCTGCAAGAGGACACTGGGGAGCTaGCAGGCGTCAGGGTCCGCC +
Preference number: 4 (lower is better)
Translates to: DASRETAASSSDSRGGCKRTLGS*QASGSA
Trigger: GGCGGACCCTGACGCCTGCCAGCTCCCCAGTGTCCT...CTTGCAGCCACCTCTGCTGTCACTGCTCGAAGCAGCAGTCTCTCTGGAAGCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CCA 90 bp GGGGTGATAAGTCCAGAGCAGACATCCTCCTCCAGTGTGAGGGTGACGCTTGGCGGTCTCCGTGCTTGCTaGGCGAGGACACTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: GVISPEQTSSSSVRVTLGGLRAC*ARTLGS
Trigger: GCTCCCCAGTGTCCTCGCCCAGCAAGCACGGAGACC...GCCAAGCGTCACCCTCACACTGGAGGAGGATGTCTGCTCTGGACTTATCACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CCA 90 bp GTGATAAGTCCAGAGCAGACATCCTCCTCCAGTGTGAGGGTGACGCTTGGCCAGCCGCTCCGACTGCAGTaGCGGGGTGCGGATGTCCCT +
Preference number: 4 (lower is better)
Translates to: VISPEQTSSSSVRVTLGQPLRLQ*RGADVP
Trigger: AGGGACATCCGCACCCCGCCACTGCAGTCGGAGCGG...CTGGCCAAGCGTCACCCTCACACTGGAGGAGGATGTCTGCTCTGGACTTATCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CCA 90 bp CTCCTGGACCCCTTGGGTCTCCTTGGCTTCCCCACGGCTGTTGGCGCTGGTGGAGCCAGATTGCACACTTaGGAGCCCGTGTCGATACAC +
Preference number: 4 (lower is better)
Translates to: LLDPLGLLGFPTAVGAGGARLHT*EPVSIH
Trigger: GTGTATCGACACGGGCTCCCAAGTGTGCAATCTGGC...TCCACCAGCGCCAACAGCCGTGGGGAAGCCAAGGAGACCCAAGGGGTCCAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CCA 90 bp ACCGGGGTCTCAGGCCCCCACCAATCAGCCCTGGCGTCTGGTGGTCTGTTCTGTGCTCGTTGGCGTGCTTaGACCAGGCCAGATTGCACA +
Preference number: 4 (lower is better)
Translates to: TGVSGPHQSALASGGLFCARWRA*TRPDCT
Trigger: TGTGCAATCTGGCCTGGTCCAAGCACGCCAACGAGC...ACAGAACAGACCACCAGACGCCAGGGCTGATTGGTGGGGGCCTGAGACCCCGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CCA 90 bp CCAGCACCAGTGACGATGGCCTCCCCATCAGGGGACATTGCCAGGTACAGCACGTGCTCACCAGCTCGTTaGCGTGCTTGGACCAGGCCA +
Preference number: 4 (lower is better)
Translates to: PAPVTMASPSGDIARYSTCSPAR*RAWTRP
Trigger: TGGCCTGGTCCAAGCACGCCAACGAGCTGGTGAGCA...CGTGCTGTACCTGGCAATGTCCCCTGATGGGGAGGCCATCGTCACTGGTGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591290.5
CDS-3UTR CCA 90 bp CATCAGGGGACATTGCCAGGTACAGCACGCGGTAGGAGTGCCCGGTCAGCTTGGGTCAGCTTGGCCACCTaGGTCAGGGAGGGGTACTTC +
Preference number: 4 (lower is better)
Translates to: HQGTLPGTARGRSARSAWVSLAT*VREGYF
Trigger: GAAGTACCCCTCCCTGACCCAGGTGGCCAAGCTGAC...CCAAGCTGACCGGGCACTCCTACCGCGTGCTGTACCTGGCAATGTCCCCTGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591290.5
CDS-3UTR CCA 90 bp TCCTGGGCCATGGGGAACCAATTCCCCCATTTCTACACGAGCCCTGGCCCATCAAGTGCCCGGTCAGCTTaGCCACCTGGGTCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: SWAMGNQFPHFYTSPGPSSARSA*PPGSGR
Trigger: CCTCCCTGACCCAGGTGGCCAAGCTGACCGGGCACT...TGATGGGCCAGGGCTCGTGTAGAAATGGGGGAATTGGTTCCCCATGGCCCAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR CCA 90 bp CGCTGGCCCTGTGAGGGCACGTGTTGGCGAATGCACGAAGACGTGGCATCTGTTCAGAGCCGCGTCACCTaGCTGGTACAGGCACTCCAC +
Preference number: 4 (lower is better)
Translates to: RWPCEGTCWRMHEDVASVQSRVT*LVQALH
Trigger: GTGGAGTGCCTGTACCAGCCAGGTGACGCGGCTCTG...AACAGATGCCACGTCTTCGTGCATTCGCCAACACGTGCCCTCACAGGGCCAGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CCA 90 bp CAGCCTGGGAGCATGAGACAGAGAAGCAGAGGAGCCTGGGAAGCTTCTCGAAGGCATAGTCCTGGTCCATaGCGAGGCAGGGCTCGGCCC +
Preference number: 4 (lower is better)
Translates to: QPGSMRQRSRGAWEASRRHSPGP*RGRARP
Trigger: GGGCCGAGCCCTGCCTCGCCATGGACCAGGACTATG...CCTTCGAGAAGCTTCCCAGGCTCCTCTGCTTCTCTGTCTCATGCTCCCAGGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CCA 90 bp GAGTCCATGCAAGCTGAGGAGCTGGGGTCCTCCGACTCTGGACAGCTGGTGTGGAGCATGCGGCTCCGGTaGGCAGGTGATGAACAGACG +
Preference number: 4 (lower is better)
Translates to: ESMQAEELGSSDSGQLVWSMRLR*AGDEQT
Trigger: CGTCTGTTCATCACCTGCCCACCGGAGCCGCATGCT...CCACACCAGCTGTCCAGAGTCGGAGGACCCCAGCTCCTCAGCTTGCATGGACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CCA 90 bp CATAAGCTTCTCTGTCTCTGGGCTGTGTCCCCCATGCCAGCTCCACATGGGCCACTTGGATCCACAGGCTaGCTCCGCCAGTGGCCCCGA +
Preference number: 4 (lower is better)
Translates to: HKLLCLWAVSPMPAPHGPLGSTG*LRQWPR
Trigger: TCGGGGCCACTGGCGGAGCCAGCCTGTGGATCCAAG...TGGCCCATGTGGAGCTGGCATGGGGGACACAGCCCAGAGACAGAGAAGCTTATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR CCA 90 bp CTCAGGCCCCCACCAATCAGCCCTGGCGTCTGGTGGTCTGTTCTGTGCAGACGTGCCGTGAAGCCCAGGTaGGGACTGTCTCTTGGATCC +
Preference number: 4 (lower is better)
Translates to: LRPPPISPGVWWSVLCRRAVKPR*GLSLGS
Trigger: GGATCCAAGAGACAGTCCCCACCTGGGCTTCACGGC...ACGTCTGCACAGAACAGACCACCAGACGCCAGGGCTGATTGGTGGGGGCCTGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CCA 90 bp CATGGGGGACGCAAGTCTTGCGCAGGGAAGGAGGACGCTGGCCCTGTGAGGGCATGTGAGGGCACGTGTTaGCGAATGCACGAAGACGTG +
Preference number: 4 (lower is better)
Translates to: HGGRKSCAGKEDAGPVRACEGTC*RMHEDV
Trigger: CACGTCTTCGTGCATTCGCCAACACGTGCCCTCACA...TGCCCTCACAGGGCCAGCGTCCTCCTTCCCTGCGCAAGACTTGCGTCCCCCATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CCA 90 bp GGCATCCGTCGCTCTGAGTACAGACGGTCTGAGCCGGGACCGTCCAATGTGGTTCTTCCCCACGGCTGTTaGCGCTGGTGGACAGGACAG +
Preference number: 4 (lower is better)
Translates to: GIRRSEYRRSEPGPSNVVLPHGC*RWWTGQ
Trigger: CTGTCCTGTCCACCAGCGCCAACAGCCGTGGGGAAG...AACCACATTGGACGGTCCCGGCTCAGACCGTCTGTACTCAGAGCGACGGATGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CCA 90 bp ATGCAAGCTGAGGAGCTGGGGTCCTCCGACTCTGGACAGCTGGTGTGGCACGGTACCTCCTGGACCCCTTaGGTCTCCTTGGCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: MQAEELGSSDSGQLVWHGTSWTP*VSLASP
Trigger: TGGGGAAGCCAAGGAGACCCAAGGGGTCCAGGAGGT...ACCGTGCCACACCAGCTGTCCAGAGTCGGAGGACCCCAGCTCCTCAGCTTGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CCA 90 bp TCAGGCCCCCACCAATCAGCCCTGGCGTCTGGTGGTCTGTTCTGTGCAGACGTGACCTCCTGGACCCCTTaGGTCTCCTTGGCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: SGPHQSALASGGLFCADVTSWTP*VSLASP
Trigger: TGGGGAAGCCAAGGAGACCCAAGGGGTCCAGGAGGT...CACGTCTGCACAGAACAGACCACCAGACGCCAGGGCTGATTGGTGGGGGCCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CCA 90 bp GGCAACCGGGGTCTCAGGCCCCCACCAATCAGCCCTGGCGTCTGGTGGTCTGTTTGTGAAATGCAGGCCTaGGAAGCCCCTCAGAAGCTG +
Preference number: 4 (lower is better)
Translates to: GNRGLRPPPISPGVWWSVCEMQA*EAPQKL
Trigger: CAGCTTCTGAGGGGCTTCCCAGGCCTGCATTTCACA...AACAGACCACCAGACGCCAGGGCTGATTGGTGGGGGCCTGAGACCCCGGTTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR CCA 90 bp CTGCTGAGGGTCCCCGACCACGTGCCCACCCCAGATACTGGTGGACATGGTTCACTGGAGTCCAGTCCTTaGCCCTGCAGGATTGTGGCC +
Preference number: 4 (lower is better)
Translates to: LLRVPDHVPTPDTGGHGSLESSP*PCRIVA
Trigger: GGCCACAATCCTGCAGGGCCAAGGACTGGACTCCAG...TGAACCATGTCCACCAGTATCTGGGGTGGGCACGTGGTCGGGGACCCTCAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR CCA 90 bp CGCCCCACCCAGACAGAGGTGGGGAGAGTCTCTCCAGTGAATGTGGAAGATCGAACAGGGCCGTCCAGCTaGAGCGCAGGGACTTGCCTG +
Preference number: 4 (lower is better)
Translates to: RPTQTEVGRVSPVNVEDRTGPSS*SAGTCL
Trigger: CAGGCAAGTCCCTGCGCTCCAGCTGGACGGCCCTGT...TCGATCTTCCACATTCACTGGAGAGACTCTCCCCACCTCTGTCTGGGTGGGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR CCA 90 bp AGAGGAGCCTGGGAAGCTTCTCGAAGGATGGAGGGCGCCCACCTCCTGGACCCCAGCTGTCCTGGGCCATaGGGAACCAATTCCCCCATT +
Preference number: 4 (lower is better)
Translates to: RGAWEASRRMEGAHLLDPSCPGP*GTNSPI
Trigger: AATGGGGGAATTGGTTCCCCATGGCCCAGGACAGCT...GGGGTCCAGGAGGTGGGCGCCCTCCATCCTTCGAGAAGCTTCCCAGGCTCCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR CCA 90 bp AGAGGAGCCTGGGAAGCTTCTCGAAGGATGGAGGGCGCCCACCTCCTGGACCCCTCCTCTCAGCTGTCCTaGGCCATGGGGAACCAATTC +
Preference number: 4 (lower is better)
Translates to: RGAWEASRRMEGAHLLDPSSQLS*AMGNQF
Trigger: GAATTGGTTCCCCATGGCCCAGGACAGCTGAGAGGA...GGGGTCCAGGAGGTGGGCGCCCTCCATCCTTCGAGAAGCTTCCCAGGCTCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR CCA 90 bp GCCTACATGCCTTGGTCTGGCCTTGGGGCTGGTCTTGGGTTTGACATGGTGGGGAAGCGATGGCCCCACTaGCCTTCGTCTGCCTGTCGG +
Preference number: 4 (lower is better)
Translates to: AYMPWSGLGAGLGFDMVGKRWPH*PSSACR
Trigger: CCGACAGGCAGACGAAGGCCAGTGGGGCCATCGCTT...CCCCACCATGTCAAACCCAAGACCAGCCCCAAGGCCAGACCAAGGCATGTAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR TCA 90 bp AGAGGAGCCTGGGAAGCTTCTCGAAGGATGGAGGGCGCCCACCTCCTGGACCCCTGTTCTCATTCTGGATaGCGATCTGGCGAAGCAGGC +
Preference number: 4 (lower is better)
Translates to: RGAWEASRRMEGAHLLDPCSHSG*RSGEAG
Trigger: GCCTGCTTCGCCAGATCGTCATCCAGAATGAGAACA...GGGGTCCAGGAGGTGGGCGCCCTCCATCCTTCGAGAAGCTTCCCAGGCTCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR TCA 90 bp GCCATGAATGGGCAACCGGGGTCTCAGGCCCCCACCAATCAGCCCTGGCGTCTGTGTTCTCATTCTGGATaGCGATCTGGCGAAGCAGGC +
Preference number: 4 (lower is better)
Translates to: AMNGQPGSQAPTNQPWRLCSHSG*RSGEAG
Trigger: GCCTGCTTCGCCAGATCGTCATCCAGAATGAGAACA...CAGACGCCAGGGCTGATTGGTGGGGGCCTGAGACCCCGGTTGCCCATTCATGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR TCA 90 bp TCCTGGGCCATGGGGAACCAATTCCCCCATTTCTACACGAGCCCTGGCCCATCACGTCTCCAGCACCAGTaGCGATGGCCTCCCCATCAG +
Preference number: 4 (lower is better)
Translates to: SWAMGNQFPHFYTSPGPSRLQHQ*RWPPHQ
Trigger: CTGATGGGGAGGCCATCGTCACTGGTGCTGGAGACG...TGATGGGCCAGGGCTCGTGTAGAAATGGGGGAATTGGTTCCCCATGGCCCAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR TCA 90 bp CGCCCCACCCAGACAGAGGTGGGGAGAGTCTCTCCAGTGAATGTGGAAGATCGAGCTGCAAGGATGCCGTaGAGCCCAGGTGGGGACTGT +
Preference number: 4 (lower is better)
Translates to: RPTQTEVGRVSPVNVEDRAARMP*SPGGDC
Trigger: ACAGTCCCCACCTGGGCTTCACGGCATCCTTGCAGC...TCGATCTTCCACATTCACTGGAGAGACTCTCCCCACCTCTGTCTGGGTGGGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR TCA 90 bp TCAGGCCCCCACCAATCAGCCCTGGCGTCTGGTGGTCTGTTCTGTGCAGACGTGTGCTGCTTCGAGCAGTaGCAGCAGAGGTGGCTGCAA +
Preference number: 4 (lower is better)
Translates to: SGPHQSALASGGLFCADVCCFEQ*QQRWLQ
Trigger: TTGCAGCCACCTCTGCTGTCACTGCTCGAAGCAGCA...CACGTCTGCACAGAACAGACCACCAGACGCCAGGGCTGATTGGTGGGGGCCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR TCA 90 bp GGGGTGATAAGTCCAGAGCAGACATCCTCCTCCAGTGTGAGGGTGACGCTTGGCAGGACGCTGGCCCTGTaGGGGCACGTGTTGGCGAAT +
Preference number: 4 (lower is better)
Translates to: GVISPEQTSSSSVRVTLGRTLAL*GHVLAN
Trigger: ATTCGCCAACACGTGCCCTCACAGGGCCAGCGTCCT...GCCAAGCGTCACCCTCACACTGGAGGAGGATGTCTGCTCTGGACTTATCACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR TCA 90 bp GCCTACATGCCTTGGTCTGGCCTTGGGGCTGGTCTTGGGTTTGACATGGTGGGGATGCCAGGCTTGTGGTaGGCCTCTGATCCAAGGCCG +
Preference number: 4 (lower is better)
Translates to: AYMPWSGLGAGLGFDMVGMPGLW*ASDPRP
Trigger: CGGCCTTGGATCAGAGGCTCACCACAAGCCTGGCAT...CCCCACCATGTCAAACCCAAGACCAGCCCCAAGGCCAGACCAAGGCATGTAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR GCA 90 bp TCTGTTCTGTGCAGACGTGGGCAGTTCCAGGAAGAGCATGCGGCTCCGGTGGGCATGAAGCGGTCTCCGTaGTTGCTGGGCGAGGACACT +
Preference number: 4 (lower is better)
Translates to: SVLCRRGQFQEEHAAPVGMKRSP*LLGEDT
Trigger: AGTGTCCTCGCCCAGCAAGCACGGAGACCGCTTCAT...GCCCACCGGAGCCGCATGCTCTTCCTGGAACTGCCCACGTCTGCACAGAACAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR GCA 90 bp GCCTACATGCCTTGGTCTGGCCTTGGGGCTGGTCTTGGGTTTGACATGGTGGGGCCTGCACCTTCTCGATaGCGGCACCCAGCAGCTCAT +
Preference number: 4 (lower is better)
Translates to: AYMPWSGLGAGLGFDMVGPAPSR*RHPAAH
Trigger: ATGAGCTGCTGGGTGCCGGCATCGAGAAGGTGCAGG...CCCCACCATGTCAAACCCAAGACCAGCCCCAAGGCCAGACCAAGGCATGTAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR GCA 90 bp CTCAGGCCCCCACCAATCAGCCCTGGCGTCTGGTGGTCTGTTCTGTGCAGACGTGCTGCGTCCCAGATCTaGACGAAGCCCTTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: LRPPPISPGVWWSVLCRRAASQI*TKPLCV
Trigger: CACACACAAGGGCTTCGTGCAGATCTGGGACGCAGC...ACGTCTGCACAGAACAGACCACCAGACGCCAGGGCTGATTGGTGGGGGCCTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR GCA 90 bp ATGCAAGCTGAGGAGCTGGGGTCCTCCGACTCTGGACAGCTGGTGTGGCACGGTGCTGCGTCCCAGATCTaGACGAAGCCCTTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: MQAEELGSSDSGQLVWHGAASQI*TKPLCV
Trigger: CACACACAAGGGCTTCGTGCAGATCTGGGACGCAGC...ACCGTGCCACACCAGCTGTCCAGAGTCGGAGGACCCCAGCTCCTCAGCTTGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR GCA 90 bp GAGTCCATGCAAGCTGAGGAGCTGGGGTCCTCCGACTCTGGACAGCTGGTGTGGCTTCTTCCCTGCGGCTaGGTCCCAGATCTGCACGAA +
Preference number: 4 (lower is better)
Translates to: ESMQAEELGSSDSGQLVWLLPCG*VPDLHE
Trigger: TTCGTGCAGATCTGGGACGCAGCCGCAGGGAAGAAG...CCACACCAGCTGTCCAGAGTCGGAGGACCCCAGCTCCTCAGCTTGCATGGACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR GCA 90 bp CCAGAACCTCAGGGTCTCGTCTCCAGCACCAGTGACGATGGCCTCCCCATCAGGCTTCTTCCCTGCGGCTaGGTCCCAGATCTGCACGAA +
Preference number: 4 (lower is better)
Translates to: PEPQGLVSSTSDDGLPIRLLPCG*VPDLHE
Trigger: TTCGTGCAGATCTGGGACGCAGCCGCAGGGAAGAAG...CCTGATGGGGAGGCCATCGTCACTGGTGCTGGAGACGAGACCCTGAGGTTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591290.5
CDS-3UTR GCA 90 bp GGCATCCGTCGCTCTGAGTACAGACGGTCTGAGCCGGGACCGTCCAATGTGGTTGGACAGCTTCTTCCCTaGGGCTGCGTCCCAGATCTG +
Preference number: 4 (lower is better)
Translates to: GIRRSEYRRSEPGPSNVVGQLLP*GCVPDL
Trigger: CAGATCTGGGACGCAGCCGCAGGGAAGAAGCTGTCC...AACCACATTGGACGGTCCCGGCTCAGACCGTCTGTACTCAGAGCGACGGATGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR GCA 90 bp GGGGTGATAAGTCCAGAGCAGACATCCTCCTCCAGTGTGAGGGTGACGCTTGGCACTGCAGTGGCGGGGTaGGGATGTCCCTCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: GVISPEQTSSSSVRVTLGTAVAG*GCPSAG
Trigger: TCCTGCAGAGGGACATCCGCACCCCGCCACTGCAGT...GCCAAGCGTCACCCTCACACTGGAGGAGGATGTCTGCTCTGGACTTATCACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR GCA 90 bp GAAGACGTGGCATCTGTTGTGCTCCTCTCCAGCCAGGGCAGTGAGCAGGTCCGGTGGACCAGGCCAGATTaGACACTTGGGAGCCCGTGT +
Preference number: 4 (lower is better)
Translates to: EDVASVVLLSSQGSEQVRWTRPD*TLGSPC
Trigger: ACACGGGCTCCCAAGTGTGCAATCTGGCCTGGTCCA...CCGGACCTGCTCACTGCCCTGGCTGGAGAGGAGCACAACAGATGCCACGTCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR GCA 90 bp GGCATCCGTCGCTCTGAGTACAGACGGTCTGAGCCGGGACCGTCCAATGTGGTTGTGAGTAGCCGTGCGTaGTCACCAGCTCGTTGGCGT +
Preference number: 4 (lower is better)
Translates to: GIRRSEYRRSEPGPSNVVVSSRA*SPARWR
Trigger: ACGCCAACGAGCTGGTGAGCACGCACGGCTACTCAC...AACCACATTGGACGGTCCCGGCTCAGACCGTCTGTACTCAGAGCGACGGATGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR GCA 90 bp TCAGGCCCCCACCAATCAGCCCTGGCGTCTGGTGGTCTGTTCTGTGCAGACGTGCCCATCAGGGGACATTaGCAGGTACAGCACGCGGTA +
Preference number: 4 (lower is better)
Translates to: SGPHQSALASGGLFCADVPIRGH*QVQHAV
Trigger: TACCGCGTGCTGTACCTGGCAATGTCCCCTGATGGG...CACGTCTGCACAGAACAGACCACCAGACGCCAGGGCTGATTGGTGGGGGCCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR GCA 90 bp AGGAAGAGCATGCGGCTCCGGTGGGCAGGTGATGAACAGACGGAGGCAGTGAGGCCCATCAGGGGACATTaGCAGGTACAGCACGCGGTA +
Preference number: 4 (lower is better)
Translates to: RKSMRLRWAGDEQTEAVRPIRGH*QVQHAV
Trigger: TACCGCGTGCTGTACCTGGCAATGTCCCCTGATGGG...CCTCACTGCCTCCGTCTGTTCATCACCTGCCCACCGGAGCCGCATGCTCTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR GCA 90 bp CTCAGGCCCCCACCAATCAGCCCTGGCGTCTGGTGGTCTGTTCTGTGCAGACGTCAGCCCTGGCTGAAATaGCAGGCTTGTGGTGAGCCT +
Preference number: 4 (lower is better)
Translates to: LRPPPISPGVWWSVLCRRQPWLK*QACGEP
Trigger: AGGCTCACCACAAGCCTGGCATTTCAGCCAGGGCTG...ACGTCTGCACAGAACAGACCACCAGACGCCAGGGCTGATTGGTGGGGGCCTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR GCA 90 bp CATAAGCTTCTCTGTCTCTGGGCTGTGTCCCCCATGCCAGCTCCACATGGGCCACTGCCCCAGGGCCTTTaGATGGCTGTGCCCTTTGCC +
Preference number: 4 (lower is better)
Translates to: HKLLCLWAVSPMPAPHGPLPQGL*MAVPFA
Trigger: GGCAAAGGGCACAGCCATGCAAAGGCCCTGGGGCAG...TGGCCCATGTGGAGCTGGCATGGGGGACACAGCCCAGAGACAGAGAAGCTTATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR GCA 90 bp GTCTCCAGCACCAGTGACGATGGCCTCCCCATCAGGGGACATTGCCAGGTACAGTGTCCTTGTTGTCGTTaGCCCCCGAGGCGAGGAGCT +
Preference number: 4 (lower is better)
Translates to: VSSTSDDGLPIRGHCQVQCPCCR*PPRRGA
Trigger: AGCTCCTCGCCTCGGGGGGCAACGACAACAAGGACA...CTGTACCTGGCAATGTCCCCTGATGGGGAGGCCATCGTCACTGGTGCTGGAGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000591290.5
CDS-3UTR GCA 90 bp GAAGACGTGGCATCTGTTGTGCTCCTCTCCAGCCAGGGCAGTGAGCAGGTCCGGAGTCTCCGTCGGAAGTaGAGTGCTCAGTCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: EDVASVVLLSSQGSEQVRSLRRK*SAQSRL
Trigger: CAGCCTGGACTGAGCACTGCACTTCCGACGGAGACT...CCGGACCTGCTCACTGCCCTGGCTGGAGAGGAGCACAACAGATGCCACGTCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652521.1
CDS-3UTR CCA 90 bp CTGCTGAGGGTCCCCGACCACGTGCCCACCCCAGATACTGGTGGACATGGTTCATTCTGGATGACGATCTaGCGAAGCAGGCGCCGCTCA +
Preference number: 4 (lower is better)
Translates to: LLRVPDHVPTPDTGGHGSFWMTI*RSRRRS
Trigger: TGAGCGGCGCCTGCTTCGCCAGATCGTCATCCAGAA...TGAACCATGTCCACCAGTATCTGGGGTGGGCACGTGGTCGGGGACCCTCAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CCA 90 bp GGCATCCGTCGCTCTGAGTACAGACGGTCTGAGCCGGGACCGTCCAATGTGGTTAGTTCACGCTCCAGTTaGCTCCGGCTCTGGAGGGGA +
Preference number: 4 (lower is better)
Translates to: GIRRSEYRRSEPGPSNVVSSRSS*LRLWRG
Trigger: TCCCCTCCAGAGCCGGAGCCAACTGGAGCGTGAACT...AACCACATTGGACGGTCCCGGCTCAGACCGTCTGTACTCAGAGCGACGGATGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CCA 90 bp TCAGCTGTCCTGGGCCATGGGGAACCAATTCCCCCATTTCTACACGAGCCCTGGCAGAGCCGCGTCACCTaGCTGGTACAGGCACTCCAC +
Preference number: 4 (lower is better)
Translates to: SAVLGHGEPIPPFLHEPWQSRVT*LVQALH
Trigger: GTGGAGTGCCTGTACCAGCCAGGTGACGCGGCTCTG...CCAGGGCTCGTGTAGAAATGGGGGAATTGGTTCCCCATGGCCCAGGACAGCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR CCA 90 bp GATGCTTCCAGAGAGACTGCTGCTTCGAGCAGTGACAGCAGAGGTGGCTGCAAGTCTGGACAGCTGGTGTaGCACGGTCCTGCCCGGCAG +
Preference number: 4 (lower is better)
Translates to: DASRETAASSSDSRGGCKSGQLV*HGPARQ
Trigger: CTGCCGGGCAGGACCGTGCCACACCAGCTGTCCAGA...CTTGCAGCCACCTCTGCTGTCACTGCTCGAAGCAGCAGTCTCTCTGGAAGCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CCA 90 bp GATGCTTCCAGAGAGACTGCTGCTTCGAGCAGTGACAGCAGAGGTGGCTGCAAGGGGGTCCTCCGACTCTaGACAGCTGGTGTGGCACGG +
Preference number: 4 (lower is better)
Translates to: DASRETAASSSDSRGGCKGVLRL*TAGVAR
Trigger: CCGTGCCACACCAGCTGTCCAGAGTCGGAGGACCCC...CTTGCAGCCACCTCTGCTGTCACTGCTCGAAGCAGCAGTCTCTCTGGAAGCATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CCA 90 bp AGCACCTCCTCCCTGGAACAGGGCCGTCCAGCTGGAGCGCAGGGACTTGCCTGGCACCCCAGATACTGGTaGACATGGTTCACAATCAGG +
Preference number: 4 (lower is better)
Translates to: STSSLEQGRPAGAQGLAWHPRYW*TWFTIR
Trigger: CCTGATTGTGAACCATGTCCACCAGTATCTGGGGTG...CCAGGCAAGTCCCTGCGCTCCAGCTGGACGGCCCTGTTCCAGGGAGGAGGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR CCA 90 bp GAAGACGTGGCATCTGTTGTGCTCCTCTCCAGCCAGGGCAGTGAGCAGGTCCGGCGGGACCGTCCAATGTaGTTCTCGCCCTTTGGGAAG +
Preference number: 4 (lower is better)
Translates to: EDVASVVLLSSQGSEQVRRDRPM*FSPFGK
Trigger: CTTCCCAAAGGGCGAGAACCACATTGGACGGTCCCG...CCGGACCTGCTCACTGCCCTGGCTGGAGAGGAGCACAACAGATGCCACGTCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CCA 90 bp AGGAAGAGCATGCGGCTCCGGTGGGCAGGTGATGAACAGACGGAGGCAGTGAGGCCCACCAATCAGCCCTaGCGTCTGGTGGTCTGTTCT +
Preference number: 4 (lower is better)
Translates to: RKSMRLRWAGDEQTEAVRPTNQP*RLVVCS
Trigger: AGAACAGACCACCAGACGCCAGGGCTGATTGGTGGG...CCTCACTGCCTCCGTCTGTTCATCACCTGCCCACCGGAGCCGCATGCTCTTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CCA 90 bp CCTTGGCTTCCCCACGGCTGTTGGCGCTGGTGGACAGGACAGGTGAAGACACAGCTACATGCCTTGGTCTaGCCTTGGGGCTGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: PWLPHGCWRWWTGQVKTQLHALV*PWGWSW
Trigger: CCAAGACCAGCCCCAAGGCCAGACCAAGGCATGTAG...CTGTGTCTTCACCTGTCCTGTCCACCAGCGCCAACAGCCGTGGGGAAGCCAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CCA 90 bp GCCTACATGCCTTGGTCTGGCCTTGGGGCTGGTCTTGGGTTTGACATGGTGGGGGTGGGGACTGTCTCTTaGATCCACAGGCTGGCTCCG +
Preference number: 4 (lower is better)
Translates to: AYMPWSGLGAGLGFDMVGVGTVS*IHRLAP
Trigger: CGGAGCCAGCCTGTGGATCCAAGAGACAGTCCCCAC...CCCCACCATGTCAAACCCAAGACCAGCCCCAAGGCCAGACCAAGGCATGTAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CCA 90 bp GGCATCCGTCGCTCTGAGTACAGACGGTCTGAGCCGGGACCGTCCAATGTGGTTTGTGAGGGTGACGCTTaGCCAGGATGCACAGGCCCA +
Preference number: 4 (lower is better)
Translates to: GIRRSEYRRSEPGPSNVVCEGDA*PGCTGP
Trigger: TGGGCCTGTGCATCCTGGCCAAGCGTCACCCTCACA...AACCACATTGGACGGTCCCGGCTCAGACCGTCTGTACTCAGAGCGACGGATGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CCA 90 bp CTCCTGGACCCCTTGGGTCTCCTTGGCTTCCCCACGGCTGTTGGCGCTGGTGGACGGGTTCAGTTCTCCTaGGGTGATAAGTCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: LLDPLGLLGFPTAVGAGGRVQFS*GDKSRA
Trigger: TGCTCTGGACTTATCACCCCAGGAGAACTGAACCCG...TCCACCAGCGCCAACAGCCGTGGGGAAGCCAAGGAGACCCAAGGGGTCCAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CCA 90 bp ACCGGGGTCTCAGGCCCCCACCAATCAGCCCTGGCGTCTGGTGGTCTGTTCTGTTGTGAGGGCACGTGTTaGCGAATGCACGAAGACGTG +
Preference number: 4 (lower is better)
Translates to: TGVSGPHQSALASGGLFCCEGTC*RMHEDV
Trigger: CACGTCTTCGTGCATTCGCCAACACGTGCCCTCACA...ACAGAACAGACCACCAGACGCCAGGGCTGATTGGTGGGGGCCTGAGACCCCGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CCA 90 bp CAGCCTGGGAGCATGAGACAGAGAAGCAGAGGAGCCTGGGAAGCTTCTCGAAGGAGGGAAGGAGGACGCTaGCCCTGTGAGGGCACGTGT +
Preference number: 4 (lower is better)
Translates to: QPGSMRQRSRGAWEASRRREGGR*PCEGTC
Trigger: ACACGTGCCCTCACAGGGCCAGCGTCCTCCTTCCCT...CCTTCGAGAAGCTTCCCAGGCTCCTCTGCTTCTCTGTCTCATGCTCCCAGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CCA 90 bp GTGATAAGTCCAGAGCAGACATCCTCCTCCAGTGTGAGGGTGACGCTTGGCCAGGCCACCCAGCAGGCATaGGGGACGCAAGTCTTGCGC +
Preference number: 4 (lower is better)
Translates to: VISPEQTSSSSVRVTLGQATQQA*GTQVLR
Trigger: GCGCAAGACTTGCGTCCCCCATGCCTGCTGGGTGGC...CTGGCCAAGCGTCACCCTCACACTGGAGGAGGATGTCTGCTCTGGACTTATCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CCA 90 bp TCAGGCCCCCACCAATCAGCCCTGGCGTCTGGTGGTCTGTTCTGTGCAGACGTGGGCTGTTGGCGCTGGTaGACAGGACAGGTGAAGACA +
Preference number: 4 (lower is better)
Translates to: SGPHQSALASGGLFCADVGCWRW*TGQVKT
Trigger: TGTCTTCACCTGTCCTGTCCACCAGCGCCAACAGCC...CACGTCTGCACAGAACAGACCACCAGACGCCAGGGCTGATTGGTGGGGGCCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CCA 90 bp GGCATCCGTCGCTCTGAGTACAGACGGTCTGAGCCGGGACCGTCCAATGTGGTTCACGGCTGTTGGCGCTaGTGGACAGGACAGGTGAAG +
Preference number: 4 (lower is better)
Translates to: GIRRSEYRRSEPGPSNVVHGCWR*WTGQVK
Trigger: CTTCACCTGTCCTGTCCACCAGCGCCAACAGCCGTG...AACCACATTGGACGGTCCCGGCTCAGACCGTCTGTACTCAGAGCGACGGATGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CCA 90 bp TCCTGGGCCATGGGGAACCAATTCCCCCATTTCTACACGAGCCCTGGCCCATCACTTCCCCACGGCTGTTaGCGCTGGTGGACAGGACAG +
Preference number: 4 (lower is better)
Translates to: SWAMGNQFPHFYTSPGPSLPHGC*RWWTGQ
Trigger: CTGTCCTGTCCACCAGCGCCAACAGCCGTGGGGAAG...TGATGGGCCAGGGCTCGTGTAGAAATGGGGGAATTGGTTCCCCATGGCCCAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR CCA 90 bp GAGGGTCCCCGACCACGTGCCCACCCCAGATACTGGTGGACATGGTTCACAATCGCACGCCAACCCCACTaGGGACAGACACCAGGATGT +
Preference number: 4 (lower is better)
Translates to: EGPRPRAHPRYWWTWFTIARQPH*GQTPGC
Trigger: ACATCCTGGTGTCTGTCCCCAGTGGGGTTGGCGTGC...GATTGTGAACCATGTCCACCAGTATCTGGGGTGGGCACGTGGTCGGGGACCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR CCA 90 bp GTGATAAGTCCAGAGCAGACATCCTCCTCCAGTGTGAGGGTGACGCTTGGCCAGCGAGCACCTCCTCCCTaGAACAGGGCCGTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: VISPEQTSSSSVRVTLGQRAPPP*NRAVQL
Trigger: CAGCTGGACGGCCCTGTTCCAGGGAGGAGGTGCTCG...CTGGCCAAGCGTCACCCTCACACTGGAGGAGGATGTCTGCTCTGGACTTATCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR CCA 90 bp GAAGACGTGGCATCTGTTGTGCTCCTCTCCAGCCAGGGCAGTGAGCAGGTCCGGCATGCCAGCTCCACATaGGCCAGGTCTGCTCGGTTT +
Preference number: 4 (lower is better)
Translates to: EDVASVVLLSSQGSEQVRHASST*ARSARF
Trigger: AAACCGAGCAGACCTGGCCCATGTGGAGCTGGCATG...CCGGACCTGCTCACTGCCCTGGCTGGAGAGGAGCACAACAGATGCCACGTCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441788.7
3UTR CAA 72 bp GCACGTGTTGGCGAATGCACGAAGACGTGGCATCTGTaGTGCTCCTCTCCAGCCAGGGCAGTGAGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: ARVGECTKTWHL*CSSPARAVSRS
Trigger: GGACCTGCTCACTGCCCTGGCTGGAGAGGAGCACAACAGATGCCACGTCTTCGTGCATTCGCCAACACGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR TCA 90 bp ACATTGCCAGGTACAGCACGCGGTAGGAGTGCCCGGTCAGCTTGGCCACCTGGGTGTTCTCATTCTGGATaGCGATCTGGCGAAGCAGGC +
Preference number: 4 (lower is better)
Translates to: TLPGTARGRSARSAWPPGCSHSG*RSGEAG
Trigger: GCCTGCTTCGCCAGATCGTCATCCAGAATGAGAACA...CCCAGGTGGCCAAGCTGACCGGGCACTCCTACCGCGTGCTGTACCTGGCAATGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591290.5
CDS-3UTR TCA 90 bp GGCAACCGGGGTCTCAGGCCCCCACCAATCAGCCCTGGCGTCTGGTGGTCTGTTTTGGCTTTCCGGTTCTaGCTGGGAGACTTCTCATTC +
Preference number: 4 (lower is better)
Translates to: GNRGLRPPPISPGVWWSVLAFRF*LGDFSF
Trigger: GAATGAGAAGTCTCCCAGTCAGAACCGGAAAGCCAA...AACAGACCACCAGACGCCAGGGCTGATTGGTGGGGGCCTGAGACCCCGGTTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR TCA 90 bp GAGGAGCCTGGGAAGCTTCTCGAAGGATGGAGGGCGCCCACCTCCTGGACCCCTTTGGCTTTCCGGTTCTaGCTGGGAGACTTCTCATTC +
Preference number: 4 (lower is better)
Translates to: EEPGKLLEGWRAPTSWTPLAFRF*LGDFSF
Trigger: GAATGAGAAGTCTCCCAGTCAGAACCGGAAAGCCAA...AGGGGTCCAGGAGGTGGGCGCCCTCCATCCTTCGAGAAGCTTCCCAGGCTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR TCA 90 bp GGCATCCGTCGCTCTGAGTACAGACGGTCTGAGCCGGGACCGTCCAATGTGGTTCCAGCAGCTCATTCTTaGGCAGGGCAGAGTAGGCCA +
Preference number: 4 (lower is better)
Translates to: GIRRSEYRRSEPGPSNVVPAAHS*AGQSRP
Trigger: TGGCCTACTCTGCCCTGCTCAAGAATGAGCTGCTGG...AACCACATTGGACGGTCCCGGCTCAGACCGTCTGTACTCAGAGCGACGGATGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR TCA 90 bp GACGTGGGCAGTTCCAGGAAGAGCATGCGGCTCCGGTGGGCAGGTGATGAACAGAAGGATCTGGTTCTGTaGGTAGCCGTGCGTGCTCAC +
Preference number: 4 (lower is better)
Translates to: DVGSSRKSMRLRWAGDEQKDLVL*VAVRAH
Trigger: GTGAGCACGCACGGCTACTCACAGAACCAGATCCTT...CTGTTCATCACCTGCCCACCGGAGCCGCATGCTCTTCCTGGAACTGCCCACGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR TCA 90 bp TCCAGCACCAGTGACGATGGCCTCCCCATCAGGGGACATTGCCAGGTACAGCACGCGCGTCCAGCACCTTaGAGGGGATCTTGGAGATCT +
Preference number: 4 (lower is better)
Translates to: SSTSDDGLPIRGHCQVQHARPAP*RGSWRS
Trigger: AGATCTCCAAGATCCCCTTCAAGGTGCTGGACGCGC...GTGCTGTACCTGGCAATGTCCCCTGATGGGGAGGCCATCGTCACTGGTGCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000591290.5
CDS-3UTR TCA 90 bp GGGACATTGCCAGGTACAGCACGCGGTAGGAGTGCCCGGTCAGCTTGGCCACCTACCAGTCCACCAGATTaGGGTAGAAGTCGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: GTLPGTARGRSARSAWPPTSPPD*GRSRPA
Trigger: TGCAGGACGACTTCTACCTCAATCTGGTGGACTGGT...AGGTGGCCAAGCTGACCGGGCACTCCTACCGCGTGCTGTACCTGGCAATGTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591290.5
CDS-3UTR TCA 90 bp TGCAAGCTGAGGAGCTGGGGTCCTCCGACTCTGGACAGCTGGTGTGGCACGGTCACCAGTCCACCAGATTaGGGTAGAAGTCGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: CKLRSWGPPTLDSWCGTVTSPPD*GRSRPA
Trigger: TGCAGGACGACTTCTACCTCAATCTGGTGGACTGGT...GACCGTGCCACACCAGCTGTCCAGAGTCGGAGGACCCCAGCTCCTCAGCTTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR TCA 90 bp GGGGTGATAAGTCCAGAGCAGACATCCTCCTCCAGTGTGAGGGTGACGCTTGGCGGCTGGTCTTGGGTTTaGCATGGTGGGGTGCAGCCA +
Preference number: 4 (lower is better)
Translates to: GVISPEQTSSSSVRVTLGGWSWV*HGGVQP
Trigger: TGGCTGCACCCCACCATGTCAAACCCAAGACCAGCC...GCCAAGCGTCACCCTCACACTGGAGGAGGATGTCTGCTCTGGACTTATCACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR TCA 90 bp GCCTACATGCCTTGGTCTGGCCTTGGGGCTGGTCTTGGGTTTGACATGGTGGGGTGCTGCTTCGAGCAGTaGCAGCAGAGGTGGCTGCAA +
Preference number: 4 (lower is better)
Translates to: AYMPWSGLGAGLGFDMVGCCFEQ*QQRWLQ
Trigger: TTGCAGCCACCTCTGCTGTCACTGCTCGAAGCAGCA...CCCCACCATGTCAAACCCAAGACCAGCCCCAAGGCCAGACCAAGGCATGTAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR TCA 90 bp TCCTGGGCCATGGGGAACCAATTCCCCCATTTCTACACGAGCCCTGGCCCATCAGCCGGGCGATGGCCATaGCACAGATGCTTCCAGAGA +
Preference number: 4 (lower is better)
Translates to: SWAMGNQFPHFYTSPGPSAGRWP*HRCFQR
Trigger: TCTCTGGAAGCATCTGTGTCATGGCCATCGCCCGGC...TGATGGGCCAGGGCTCGTGTAGAAATGGGGGAATTGGTTCCCCATGGCCCAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR TCA 90 bp GGGGTGATAAGTCCAGAGCAGACATCCTCCTCCAGTGTGAGGGTGACGCTTGGCGCCGGGCGATGGCCATaGCACAGATGCTTCCAGAGA +
Preference number: 4 (lower is better)
Translates to: GVISPEQTSSSSVRVTLGAGRWP*HRCFQR
Trigger: TCTCTGGAAGCATCTGTGTCATGGCCATCGCCCGGC...GCCAAGCGTCACCCTCACACTGGAGGAGGATGTCTGCTCTGGACTTATCACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR TCA 90 bp GGCATCCGTCGCTCTGAGTACAGACGGTCTGAGCCGGGACCGTCCAATGTGGTTTTCTCCAGCCCTGGCTaGAATGCCAGGCTTGTGGTG +
Preference number: 4 (lower is better)
Translates to: GIRRSEYRRSEPGPSNVVFSSPG*NARLVV
Trigger: CACCACAAGCCTGGCATTTCAGCCAGGGCTGGAGAA...AACCACATTGGACGGTCCCGGCTCAGACCGTCTGTACTCAGAGCGACGGATGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR TCA 90 bp CGCTGGCCCTGTGAGGGCACGTGTTGGCGAATGCACGAAGACGTGGCATCTGTTCAAGTCCAGCAAATCTaGGACCAGAGGGAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: RWPCEGTCWRMHEDVASVQVQQI*DQREAS
Trigger: GCTGGCCTCCCTCTGGTCTCAGATTTGCTGGACTTG...AACAGATGCCACGTCTTCGTGCATTCGCCAACACGTGCCCTCACAGGGCCAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652521.1
CDS-3UTR GCA 90 bp GGGGTGATAAGTCCAGAGCAGACATCCTCCTCCAGTGTGAGGGTGACGCTTGGCTCAGTCTGCGGGTCCTaGACCTTCTCGATGCCGGCA +
Preference number: 4 (lower is better)
Translates to: GVISPEQTSSSSVRVTLGSVCGS*TFSMPA
Trigger: TGCCGGCATCGAGAAGGTGCAGGACCCGCAGACTGA...GCCAAGCGTCACCCTCACACTGGAGGAGGATGTCTGCTCTGGACTTATCACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR GCA 90 bp CCGGATCCTGGTGAAGAGGTTGAGCACAGACACAGACTCCTTTGTCGAACGGGTTCAGGCGTGGAGGGCTaGAGCCTGCGGTCCTCAGTC +
Preference number: 4 (lower is better)
Translates to: PDPGEEVEHRHRLLCRTGSGVEG*SLRSSV
Trigger: GACTGAGGACCGCAGGCTGCAGCCCTCCACGCCTGA...ACCCGTTCGACAAAGGAGTCTGTGTCTGTGCTCAACCTCTTCACCAGGATCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591290.5
CDS-3UTR GCA 90 bp GATGCTTCCAGAGAGACTGCTGCTTCGAGCAGTGACAGCAGAGGTGGCTGCAAGCGAAGCCCTTGTGTGTaGCCACCGCCACCAGGTTCC +
Preference number: 4 (lower is better)
Translates to: DASRETAASSSDSRGGCKRSPCV*PPPPGS
Trigger: GGAACCTGGTGGCGGTGGGCACACACAAGGGCTTCG...CTTGCAGCCACCTCTGCTGTCACTGCTCGAAGCAGCAGTCTCTCTGGAAGCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR GCA 90 bp GATGCTTCCAGAGAGACTGCTGCTTCGAGCAGTGACAGCAGAGGTGGCTGCAAGGCAGCTTGTTGTCGTTaGCCCCCGAGGCGAGGAGCT +
Preference number: 4 (lower is better)
Translates to: DASRETAASSSDSRGGCKAACCR*PPRRGA
Trigger: AGCTCCTCGCCTCGGGGGGCAACGACAACAAGCTGC...CTTGCAGCCACCTCTGCTGTCACTGCTCGAAGCAGCAGTCTCTCTGGAAGCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR GCA 90 bp GATGCTTCCAGAGAGACTGCTGCTTCGAGCAGTGACAGCAGAGGTGGCTGCAAGTTCACGGCCGCCAGGTaGTCCGTGTACTGCTGCACG +
Preference number: 4 (lower is better)
Translates to: DASRETAASSSDSRGGCKFTAAR*SVYCCT
Trigger: CGTGCAGCAGTACACGGAGCACCTGGCGGCCGTGAA...CTTGCAGCCACCTCTGCTGTCACTGCTCGAAGCAGCAGTCTCTCTGGAAGCATC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR GCA 90 bp GACGGTCTGAGCCGGGACCGTCCAATGTGGTTCTCGCCCTTTGGGAAGGGAGACCCCGTGTCGATACACTaGAGTGGTTGTCCTGTCAGC +
Preference number: 4 (lower is better)
Translates to: DGLSRDRPMWFSPFGKGDPVSIH*SGCPVS
Trigger: GCTGACAGGACAACCACTGCAGTGTATCGACACGGG...GTCTCCCTTCCCAAAGGGCGAGAACCACATTGGACGGTCCCGGCTCAGACCGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR GCA 90 bp GGTCAGCTTGGCCACCTGGGTCAGGGAGGGGTACTTCCAGACAAGGATCTGGTTGTGAGTAGCCGTGCGTaGTCACCAGCTCGTTGGCGT +
Preference number: 4 (lower is better)
Translates to: GQLGHLGQGGVLPDKDLVVSSRA*SPARWR
Trigger: ACGCCAACGAGCTGGTGAGCACGCACGGCTACTCAC...AACCAGATCCTTGTCTGGAAGTACCCCTCCCTGACCCAGGTGGCCAAGCTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591290.5
CDS-3UTR GCA 90 bp GGGGTGATAAGTCCAGAGCAGACATCCTCCTCCAGTGTGAGGGTGACGCTTGGCAGGGAGACACATCGTTaGCGTCATCGGGGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: GVISPEQTSSSSVRVTLGRETHR*RHRGWS
Trigger: GCTCCAGCCCCGATGACGGCAACGATGTGTCTCCCT...GCCAAGCGTCACCCTCACACTGGAGGAGGATGTCTGCTCTGGACTTATCACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR GCA 90 bp GACGTGGGCAGTTCCAGGAAGAGCATGCGGCTCCGGTGGGCAGGTGATGAACAGTGGTGGTCTGTTCTGTaGAGACGTGGGCAGTTCCAG +
Preference number: 4 (lower is better)
Translates to: DVGSSRKSMRLRWAGDEQWWSVL*RRGQFQ
Trigger: CTGGAACTGCCCACGTCTGCACAGAACAGACCACCA...CTGTTCATCACCTGCCCACCGGAGCCGCATGCTCTTCCTGGAACTGCCCACGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR GCA 90 bp GTGATAAGTCCAGAGCAGACATCCTCCTCCAGTGTGAGGGTGACGCTTGGCCAGAGGTGGCTGCAAGGATaGCGTGAAGCCCAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: VISPEQTSSSSVRVTLGQRWLQG*REAQVG
Trigger: CCCCACCTGGGCTTCACGGCATCCTTGCAGCCACCT...CTGGCCAAGCGTCACCCTCACACTGGAGGAGGATGTCTGCTCTGGACTTATCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR GCA 90 bp ATGCAAGCTGAGGAGCTGGGGTCCTCCGACTCTGGACAGCTGGTGTGGCACGGTGCACGTGTTGGCGAATaGACGAAGACGTGGCATCTG +
Preference number: 4 (lower is better)
Translates to: MQAEELGSSDSGQLVWHGARVGE*TKTWHL
Trigger: CAGATGCCACGTCTTCGTGCATTCGCCAACACGTGC...ACCGTGCCACACCAGCTGTCCAGAGTCGGAGGACCCCAGCTCCTCAGCTTGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR GCA 90 bp AGAGGAGCCTGGGAAGCTTCTCGAAGGATGGAGGGCGCCCACCTCCTGGACCCCATACATATGTACACATaGACGCCAACCCCACTGGGG +
Preference number: 4 (lower is better)
Translates to: RGAWEASRRMEGAHLLDPIHMYT*TPTPLG
Trigger: CCCCAGTGGGGTTGGCGTGCATGTGTACATATGTAT...GGGGTCCAGGAGGTGGGCGCCCTCCATCCTTCGAGAAGCTTCCCAGGCTCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR GCA 90 bp CAGCCTGGGAGCATGAGACAGAGAAGCAGAGGAGCCTGGGAAGCTTCTCGAAGGTGGAGCGCAGGGACTTaGCTGGAGTCCAGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: QPGSMRQRSRGAWEASRRWSAGT*LESSPW
Trigger: CCAAGGACTGGACTCCAGGCAAGTCCCTGCGCTCCA...CCTTCGAGAAGCTTCCCAGGCTCCTCTGCTTCTCTGTCTCATGCTCCCAGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR GCA 90 bp GAGGAGCCTGGGAAGCTTCTCGAAGGATGGAGGGCGCCCACCTCCTGGACCCCTCTCTTTCCCTCTCACTaGACCAGCTACATTCCAGGA +
Preference number: 4 (lower is better)
Translates to: EEPGKLLEGWRAPTSWTPLFPSH*TSYIPG
Trigger: TCCTGGAATGTAGCTGGTGCAGTGAGAGGGAAAGAG...AGGGGTCCAGGAGGTGGGCGCCCTCCATCCTTCGAGAAGCTTCCCAGGCTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR GCA 90 bp GTGAGCAGGTCCGGGTTCAGTTCTCCTGGGGTGATAAGTCCAGAGCAGACATCCCATGGCTGTGCCCTTTaGCTCTCACCCAGGCGTCCC +
Preference number: 4 (lower is better)
Translates to: VSRSGFSSPGVISPEQTSHGCAL*LSPRRP
Trigger: GGGACGCCTGGGTGAGAGGCAAAGGGCACAGCCATG...GGATGTCTGCTCTGGACTTATCACCCCAGGAGAACTGAACCCGGACCTGCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR GCA 90 bp GTGATAAGTCCAGAGCAGACATCCTCCTCCAGTGTGAGGGTGACGCTTGGCCAGGCTCAGTCCAGGCTGTaGAGAGGTGGTGCGTGCAGC +
Preference number: 4 (lower is better)
Translates to: VISPEQTSSSSVRVTLGQAQSRL*RGGACS
Trigger: GCTGCACGCACCACCTCTGCACAGCCTGGACTGAGC...CTGGCCAAGCGTCACCCTCACACTGGAGGAGGATGTCTGCTCTGGACTTATCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652521.1
CDS-3UTR CCA 90 bp GGCAACCGGGGTCTCAGGCCCCCACCAATCAGCCCTGGCGTCTGGTGGTCTGTTCATCTCTGTGACGCGTaGCATCGTGTTCTCATTCTG +
Preference number: 4 (lower is better)
Translates to: GNRGLRPPPISPGVWWSVHLCDA*HRVLIL
Trigger: CAGAATGAGAACACGATGCCACGCGTCACAGAGATG...AACAGACCACCAGACGCCAGGGCTGATTGGTGGGGGCCTGAGACCCCGGTTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CCA 90 bp TCCTGGGCCATGGGGAACCAATTCCCCCATTTCTACACGAGCCCTGGCCCATCAAGTTCACGCTCCAGTTaGCTCCGGCTCTGGAGGGGA +
Preference number: 4 (lower is better)
Translates to: SWAMGNQFPHFYTSPGPSSSRSS*LRLWRG
Trigger: TCCCCTCCAGAGCCGGAGCCAACTGGAGCGTGAACT...TGATGGGCCAGGGCTCGTGTAGAAATGGGGGAATTGGTTCCCCATGGCCCAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR CCA 90 bp GAGGGTCCCCGACCACGTGCCCACCCCAGATACTGGTGGACATGGTTCACAATCTGCCGTTGTCTGAGGTaGCGTCCTTGGCTTTCCGGT +
Preference number: 4 (lower is better)
Translates to: EGPRPRAHPRYWWTWFTICRCLR*RPWLSG
Trigger: ACCGGAAAGCCAAGGACGCCACCTCAGACAACGGCA...GATTGTGAACCATGTCCACCAGTATCTGGGGTGGGCACGTGGTCGGGGACCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CCA 90 bp CTAAAGACGTTCCAGAACCTCAGGGTCTCGTCTCCAGCACCAGTGACGATGGCCCCTTCTTCTCAGGCGTaGAGGGCTGCAGCCTGCGGT +
Preference number: 4 (lower is better)
Translates to: LKTFQNLRVSSPAPVTMAPSSQA*RAAACG
Trigger: ACCGCAGGCTGCAGCCCTCCACGCCTGAGAAGAAGG...GGCCATCGTCACTGGTGCTGGAGACGAGACCCTGAGGTTCTGGAACGTCTTTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591290.5
CDS-3UTR CCA 90 bp GTGAGCAGGTCCGGGTTCAGTTCTCCTGGGGTGATAAGTCCAGAGCAGACATCCCAGCCCGTGCTGATGTaGGGACCAGGCGATGGCCTT +
Preference number: 4 (lower is better)
Translates to: VSRSGFSSPGVISPEQTSQPVLM*GPGDGL
Trigger: AAGGCCATCGCCTGGTCCCCACATCAGCACGGGCTG...GGATGTCTGCTCTGGACTTATCACCCCAGGAGAACTGAACCCGGACCTGCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CCA 90 bp CGCAAGTCTTGCGCAGGGAAGGAGGACGCTGGCCCTGTGAGGGCACGTGTTGGCGTCGATACACTGCAGTaGTTGTCCTGTCAGCGTGTT +
Preference number: 4 (lower is better)
Translates to: RKSCAGKEDAGPVRARVGVDTLQ*LSCQRV
Trigger: AACACGCTGACAGGACAACCACTGCAGTGTATCGAC...GCCAACACGTGCCCTCACAGGGCCAGCGTCCTCCTTCCCTGCGCAAGACTTGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CCA 90 bp CAGCCTGGGAGCATGAGACAGAGAAGCAGAGGAGCCTGGGAAGCTTCTCGAAGGTGCTCACCAGCTCGTTaGCGTGCTTGGACCAGGCCA +
Preference number: 4 (lower is better)
Translates to: QPGSMRQRSRGAWEASRRCSPAR*RAWTRP
Trigger: TGGCCTGGTCCAAGCACGCCAACGAGCTGGTGAGCA...CCTTCGAGAAGCTTCCCAGGCTCCTCTGCTTCTCTGTCTCATGCTCCCAGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CCA 90 bp CTAAAGACGTTCCAGAACCTCAGGGTCTCGTCTCCAGCACCAGTGACGATGGCCCAGAGCCGCGTCACCTaGCTGGTACAGGCACTCCAC +
Preference number: 4 (lower is better)
Translates to: LKTFQNLRVSSPAPVTMAQSRVT*LVQALH
Trigger: GTGGAGTGCCTGTACCAGCCAGGTGACGCGGCTCTG...GGCCATCGTCACTGGTGCTGGAGACGAGACCCTGAGGTTCTGGAACGTCTTTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591290.5
CDS-3UTR CCA 90 bp CAGCCTGGGAGCATGAGACAGAGAAGCAGAGGAGCCTGGGAAGCTTCTCGAAGGTGCAAGCTGAGGAGCTaGGGTCCTCCGACTCTGGAC +
Preference number: 4 (lower is better)
Translates to: QPGSMRQRSRGAWEASRRCKLRS*GPPTLD
Trigger: GTCCAGAGTCGGAGGACCCCAGCTCCTCAGCTTGCA...CCTTCGAGAAGCTTCCCAGGCTCCTCTGCTTCTCTGTCTCATGCTCCCAGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CCA 90 bp TCAGCTGTCCTGGGCCATGGGGAACCAATTCCCCCATTTCTACACGAGCCCTGGGTGGTTCTCGCCCTTTaGGAAGGGAGACAGAGCCCC +
Preference number: 4 (lower is better)
Translates to: SAVLGHGEPIPPFLHEPWVVLAL*EGRQSP
Trigger: GGGGCTCTGTCTCCCTTCCCAAAGGGCGAGAACCAC...CCAGGGCTCGTGTAGAAATGGGGGAATTGGTTCCCCATGGCCCAGGACAGCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR CCA 90 bp TCTGTTCTGTGCAGACGTGGGCAGTTCCAGGAAGAGCATGCGGCTCCGGTGGGCATCAGCCCTGGCGTCTaGTGGTCTGTTCTGTGCAGA +
Preference number: 4 (lower is better)
Translates to: SVLCRRGQFQEEHAAPVGISPGV*WSVLCR
Trigger: TCTGCACAGAACAGACCACCAGACGCCAGGGCTGAT...GCCCACCGGAGCCGCATGCTCTTCCTGGAACTGCCCACGTCTGCACAGAACAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CCA 90 bp ACCGGGGTCTCAGGCCCCCACCAATCAGCCCTGGCGTCTGGTGGTCTGTTCTGTTTGGGTTTGACATGGTaGGGTGCAGCCATGAATGGG +
Preference number: 4 (lower is better)
Translates to: TGVSGPHQSALASGGLFCLGLTW*GAAMNG
Trigger: CCCATTCATGGCTGCACCCCACCATGTCAAACCCAA...ACAGAACAGACCACCAGACGCCAGGGCTGATTGGTGGGGGCCTGAGACCCCGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CCA 90 bp GAGGGTCCCCGACCACGTGCCCACCCCAGATACTGGTGGACATGGTTCACAATCCTACATGCCTTGGTCTaGCCTTGGGGCTGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: EGPRPRAHPRYWWTWFTILHALV*PWGWSW
Trigger: CCAAGACCAGCCCCAAGGCCAGACCAAGGCATGTAG...GATTGTGAACCATGTCCACCAGTATCTGGGGTGGGCACGTGGTCGGGGACCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CCA 90 bp GCCTACATGCCTTGGTCTGGCCTTGGGGCTGGTCTTGGGTTTGACATGGTGGGGGCCTGCTGTGCAGCCTaGGAGCATGAGACAGAGAAG +
Preference number: 4 (lower is better)
Translates to: AYMPWSGLGAGLGFDMVGACCAA*EHETEK
Trigger: CTTCTCTGTCTCATGCTCCCAGGCTGCACAGCAGGC...CCCCACCATGTCAAACCCAAGACCAGCCCCAAGGCCAGACCAAGGCATGTAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CCA 90 bp GTGAGCAGGTCCGGGTTCAGTTCTCCTGGGGTGATAAGTCCAGAGCAGACATCCCTCCAATGCCCAGGATaGGGCCTGCCCCAGCTCCTT +
Preference number: 4 (lower is better)
Translates to: VSRSGFSSPGVISPEQTSLQCPG*GLPQLL
Trigger: AAGGAGCTGGGGCAGGCCCCATCCTGGGCATTGGAG...GGATGTCTGCTCTGGACTTATCACCCCAGGAGAACTGAACCCGGACCTGCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR CCA 90 bp CCTTGGCTTCCCCACGGCTGTTGGCGCTGGTGGACAGGACAGGTGAAGACACAGGTTGGGGAGGACAGCTaGAAACATCGGCTTCACAGG +
Preference number: 4 (lower is better)
Translates to: PWLPHGCWRWWTGQVKTQVGEDS*KHRLHR
Trigger: CCTGTGAAGCCGATGTTTCCAGCTGTCCTCCCCAAC...CTGTGTCTTCACCTGTCCTGTCCACCAGCGCCAACAGCCGTGGGGAAGCCAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652521.1
3UTR CAA 72 bp ACATGCCTTGGTCTGGCCTTGGGGCTGGTCTTGGGTTaGACATGGTGGGGTGCAGCCATGAATGGGCAACCG +
Preference number: 4 (lower is better)
Translates to: TCLGLALGLVLG*TWWGAAMNGQP
Trigger: CGGTTGCCCATTCATGGCTGCACCCCACCATGTCAAACCCAAGACCAGCCCCAAGGCCAGACCAAGGCATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
3UTR CAA 72 bp AGGCCTACATGCCTTGGTCTGGCCTTGGGGCTGGTCTaGGGTTTGACATGGTGGGGTGCAGCCATGAATGGG +
Preference number: 4 (lower is better)
Translates to: RPTCLGLALGLV*GLTWWGAAMNG
Trigger: CCCATTCATGGCTGCACCCCACCATGTCAAACCCAAGACCAGCCCCAAGGCCAGACCAAGGCATGTAGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR TCA 90 bp CTCAGGGTCTCGTCTCCAGCACCAGTGACGATGGCCTCCCCATCAGGGGACATTAAGGATCTGGTTCTGTaGGTAGCCGTGCGTGCTCAC +
Preference number: 4 (lower is better)
Translates to: LRVSSPAPVTMASPSGDIKDLVL*VAVRAH
Trigger: GTGAGCACGCACGGCTACTCACAGAACCAGATCCTT...AATGTCCCCTGATGGGGAGGCCATCGTCACTGGTGCTGGAGACGAGACCCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591290.5
CDS-3UTR TCA 90 bp GAGGGTCCCCGACCACGTGCCCACCCCAGATACTGGTGGACATGGTTCACAATCAAGGATCTGGTTCTGTaGGTAGCCGTGCGTGCTCAC +
Preference number: 4 (lower is better)
Translates to: EGPRPRAHPRYWWTWFTIKDLVL*VAVRAH
Trigger: GTGAGCACGCACGGCTACTCACAGAACCAGATCCTT...GATTGTGAACCATGTCCACCAGTATCTGGGGTGGGCACGTGGTCGGGGACCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR TCA 90 bp CAGCCTGGGAGCATGAGACAGAGAAGCAGAGGAGCCTGGGAAGCTTCTCGAAGGGCGCGTCCAGCACCTTaGAGGGGATCTTGGAGATCT +
Preference number: 4 (lower is better)
Translates to: QPGSMRQRSRGAWEASRRARPAP*RGSWRS
Trigger: AGATCTCCAAGATCCCCTTCAAGGTGCTGGACGCGC...CCTTCGAGAAGCTTCCCAGGCTCCTCTGCTTCTCTGTCTCATGCTCCCAGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR GCA 90 bp GGTCAGCTTGGCCACCTGGGTCAGGGAGGGGTACTTCCAGACAAGGATCTGGTTATGAAGCGGTCTCCGTaGTTGCTGGGCGAGGACACT +
Preference number: 4 (lower is better)
Translates to: GQLGHLGQGGVLPDKDLVMKRSP*LLGEDT
Trigger: AGTGTCCTCGCCCAGCAAGCACGGAGACCGCTTCAT...AACCAGATCCTTGTCTGGAAGTACCCCTCCCTGACCCAGGTGGCCAAGCTGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591290.5
CDS-3UTR GCA 90 bp GTGAGCAGGTCCGGGTTCAGTTCTCCTGGGGTGATAAGTCCAGAGCAGACATCCAGGCCAGGCCGTCTTTaGCGTTGTCTGAGGTGGCGT +
Preference number: 4 (lower is better)
Translates to: VSRSGFSSPGVISPEQTSRPGRL*RCLRWR
Trigger: ACGCCACCTCAGACAACGGCAAAGACGGCCTGGCCT...GGATGTCTGCTCTGGACTTATCACCCCAGGAGAACTGAACCCGGACCTGCTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR GCA 90 bp CAGCCTGGGAGCATGAGACAGAGAAGCAGAGGAGCCTGGGAAGCTTCTCGAAGGCTTCTTCCCTGCGGCTaGGTCCCAGATCTGCACGAA +
Preference number: 4 (lower is better)
Translates to: QPGSMRQRSRGAWEASRRLLPCG*VPDLHE
Trigger: TTCGTGCAGATCTGGGACGCAGCCGCAGGGAAGAAG...CCTTCGAGAAGCTTCCCAGGCTCCTCTGCTTCTCTGTCTCATGCTCCCAGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR GCA 90 bp GACTCCTTTGTCGAACGGGTTTTGCTAAAGACGTTCCAGAACCTCAGGGTCTCGCAGCGCCCCGACGCGTaGCGTGTGGCCCTCCAACAT +
Preference number: 4 (lower is better)
Translates to: DSFVERVLLKTFQNLRVSQRPDA*RVALQH
Trigger: ATGTTGGAGGGCCACACGGCACGCGTCGGGGCGCTG...CGAGACCCTGAGGTTCTGGAACGTCTTTAGCAAAACCCGTTCGACAAAGGAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591290.5
CDS-3UTR GCA 90 bp GGTCAGCTTGGCCACCTGGGTCAGGGAGGGGTACTTCCAGACAAGGATCTGGTTCCCATCAGGGGACATTaGCAGGTACAGCACGCGGTA +
Preference number: 4 (lower is better)
Translates to: GQLGHLGQGGVLPDKDLVPIRGH*QVQHAV
Trigger: TACCGCGTGCTGTACCTGGCAATGTCCCCTGATGGG...AACCAGATCCTTGTCTGGAAGTACCCCTCCCTGACCCAGGTGGCCAAGCTGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591290.5
CDS-3UTR GCA 90 bp GTGAGCAGGTCCGGGTTCAGTTCTCCTGGGGTGATAAGTCCAGAGCAGACATCCCAGGCTCCTGCCTCCTaGACCTCTCATCGCAGAACC +
Preference number: 4 (lower is better)
Translates to: VSRSGFSSPGVISPEQTSQAPAS*TSHRRT
Trigger: GGTTCTGCGATGAGAGGTGCAGGAGGCAGGAGCCTG...GGATGTCTGCTCTGGACTTATCACCCCAGGAGAACTGAACCCGGACCTGCTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR GCA 90 bp ACATGCCTTGGTCTGGCCTTGGGGCTGGTCTTGGGTTTGACATGGTGGGGTGCAGCCTTTGCATGGCTGTaGCCTTTGCCTCTCACCCAG +
Preference number: 4 (lower is better)
Translates to: TCLGLALGLVLGLTWWGAAFAWL*PLPLTQ
Trigger: CTGGGTGAGAGGCAAAGGGCACAGCCATGCAAAGGC...TGCACCCCACCATGTCAAACCCAAGACCAGCCCCAAGGCCAGACCAAGGCATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR CCA 90 bp GGGGTGATAAGTCCAGAGCAGACATCCTCCTCCAGTGTGAGGGTGACGCTTGGCCTGAGGTGGCGTCCTTaGCTTTCCGGTTCTGACTGG +
Preference number: 4 (lower is better)
Translates to: GVISPEQTSSSSVRVTLGLRWRP*LSGSDW
Trigger: CCAGTCAGAACCGGAAAGCCAAGGACGCCACCTCAG...GCCAAGCGTCACCCTCACACTGGAGGAGGATGTCTGCTCTGGACTTATCACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CCA 90 bp ACATGCCTTGGTCTGGCCTTGGGGCTGGTCTTGGGTTTGACATGGTGGGGTGCATGCCGTTGTCTGAGGTaGCGTCCTTGGCTTTCCGGT +
Preference number: 4 (lower is better)
Translates to: TCLGLALGLVLGLTWWGACRCLR*RPWLSG
Trigger: ACCGGAAAGCCAAGGACGCCACCTCAGACAACGGCA...TGCACCCCACCATGTCAAACCCAAGACCAGCCCCAAGGCCAGACCAAGGCATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CCA 90 bp GATGCTTCCAGAGAGACTGCTGCTTCGAGCAGTGACAGCAGAGGTGGCTGCAAGGAGGCGAGGAGCTGGTaGTCTGTGGACCACTTGAGC +
Preference number: 4 (lower is better)
Translates to: DASRETAASSSDSRGGCKEARSW*SVDHLS
Trigger: GCTCAAGTGGTCCACAGACCACCAGCTCCTCGCCTC...CTTGCAGCCACCTCTGCTGTCACTGCTCGAAGCAGCAGTCTCTCTGGAAGCATC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CCA 90 bp ACCGGGGTCTCAGGCCCCCACCAATCAGCCCTGGCGTCTGGTGGTCTGTTCTGTGTCGATACACTGCAGTaGTTGTCCTGTCAGCGTGTT +
Preference number: 4 (lower is better)
Translates to: TGVSGPHQSALASGGLFCVDTLQ*LSCQRV
Trigger: AACACGCTGACAGGACAACCACTGCAGTGTATCGAC...ACAGAACAGACCACCAGACGCCAGGGCTGATTGGTGGGGGCCTGAGACCCCGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CCA 90 bp TCTCCAGCACCAGTGACGATGGCCTCCCCATCAGGGGACATTGCCAGGTACAGCGCCAGATTGCACACTTaGGAGCCCGTGTCGATACAC +
Preference number: 4 (lower is better)
Translates to: SPAPVTMASPSGDIARYSARLHT*EPVSIH
Trigger: GTGTATCGACACGGGCTCCCAAGTGTGCAATCTGGC...GCTGTACCTGGCAATGTCCCCTGATGGGGAGGCCATCGTCACTGGTGCTGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591290.5
CDS-3UTR CCA 90 bp GGGGTGATAAGTCCAGAGCAGACATCCTCCTCCAGTGTGAGGGTGACGCTTGGCGCTCGTTGGCGTGCTTaGACCAGGCCAGATTGCACA +
Preference number: 4 (lower is better)
Translates to: GVISPEQTSSSSVRVTLGARWRA*TRPDCT
Trigger: TGTGCAATCTGGCCTGGTCCAAGCACGCCAACGAGC...GCCAAGCGTCACCCTCACACTGGAGGAGGATGTCTGCTCTGGACTTATCACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CCA 90 bp ACCGGGGTCTCAGGCCCCCACCAATCAGCCCTGGCGTCTGGTGGTCTGTTCTGTCACCCCAGATACTGGTaGACATGGTTCACAATCAGG +
Preference number: 4 (lower is better)
Translates to: TGVSGPHQSALASGGLFCHPRYW*TWFTIR
Trigger: CCTGATTGTGAACCATGTCCACCAGTATCTGGGGTG...ACAGAACAGACCACCAGACGCCAGGGCTGATTGGTGGGGGCCTGAGACCCCGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CCA 90 bp AGGAAGAGCATGCGGCTCCGGTGGGCAGGTGATGAACAGACGGAGGCAGTGAGGTTGGGTTTGACATGGTaGGGTGCAGCCATGAATGGG +
Preference number: 4 (lower is better)
Translates to: RKSMRLRWAGDEQTEAVRLGLTW*GAAMNG
Trigger: CCCATTCATGGCTGCACCCCACCATGTCAAACCCAA...CCTCACTGCCTCCGTCTGTTCATCACCTGCCCACCGGAGCCGCATGCTCTTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CCA 90 bp TCCTGGGCCATGGGGAACCAATTCCCCCATTTCTACACGAGCCCTGGCCCATCAGGCTGTTGGCGCTGGTaGACAGGACAGGTGAAGACA +
Preference number: 4 (lower is better)
Translates to: SWAMGNQFPHFYTSPGPSGCWRW*TGQVKT
Trigger: TGTCTTCACCTGTCCTGTCCACCAGCGCCAACAGCC...TGATGGGCCAGGGCTCGTGTAGAAATGGGGGAATTGGTTCCCCATGGCCCAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR CCA 90 bp CAGCCTGGGAGCATGAGACAGAGAAGCAGAGGAGCCTGGGAAGCTTCTCGAAGGGCCTGCTGTGCAGCCTaGGAGCATGAGACAGAGAAG +
Preference number: 4 (lower is better)
Translates to: QPGSMRQRSRGAWEASRRACCAA*EHETEK
Trigger: CTTCTCTGTCTCATGCTCCCAGGCTGCACAGCAGGC...CCTTCGAGAAGCTTCCCAGGCTCCTCTGCTTCTCTGTCTCATGCTCCCAGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CCA 90 bp GAGGGTCCCCGACCACGTGCCCACCCCAGATACTGGTGGACATGGTTCACAATCTTTCTACACGAGCCCTaGCCCATCATCATGGGACCC +
Preference number: 4 (lower is better)
Translates to: EGPRPRAHPRYWWTWFTIFLHEP*PIIMGP
Trigger: GGGTCCCATGATGATGGGCCAGGGCTCGTGTAGAAA...GATTGTGAACCATGTCCACCAGTATCTGGGGTGGGCACGTGGTCGGGGACCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR TCA 90 bp GTGATAAGTCCAGAGCAGACATCCTCCTCCAGTGTGAGGGTGACGCTTGGCCAGGCGCGTCCAGCACCTTaGAGGGGATCTTGGAGATCT +
Preference number: 4 (lower is better)
Translates to: VISPEQTSSSSVRVTLGQARPAP*RGSWRS
Trigger: AGATCTCCAAGATCCCCTTCAAGGTGCTGGACGCGC...CTGGCCAAGCGTCACCCTCACACTGGAGGAGGATGTCTGCTCTGGACTTATCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR GCA 90 bp GAACGGGTTTTGCTAAAGACGTTCCAGAACCTCAGGGTCTCGTCTCCAGCACCAACTGCAGTGGCGGGGTaGGGATGTCCCTCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: ERVLLKTFQNLRVSSPAPTAVAG*GCPSAG
Trigger: TCCTGCAGAGGGACATCCGCACCCCGCCACTGCAGT...TGGTGCTGGAGACGAGACCCTGAGGTTCTGGAACGTCTTTAGCAAAACCCGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591290.5
CDS-3UTR GCA 90 bp GAGTCCATGCAAGCTGAGGAGCTGGGGTCCTCCGACTCTGGACAGCTGGTGTGGCTTCACAGGCAGCATTaGCCAGACAGTAGCTTGTAC +
Preference number: 4 (lower is better)
Translates to: ESMQAEELGSSDSGQLVWLHRQH*PDSSLY
Trigger: GTACAAGCTACTGTCTGGGCAATGCTGCCTGTGAAG...CCACACCAGCTGTCCAGAGTCGGAGGACCCCAGCTCCTCAGCTTGCATGGACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652521.1
CDS-3UTR CCA 90 bp GTGAGCAGGTCCGGGTTCAGTTCTCCTGGGGTGATAAGTCCAGAGCAGACATCCTTCTGGATGACGATCTaGCGAAGCAGGCGCCGCTCA +
Preference number: 4 (lower is better)
Translates to: VSRSGFSSPGVISPEQTSFWMTI*RSRRRS
Trigger: TGAGCGGCGCCTGCTTCGCCAGATCGTCATCCAGAA...GGATGTCTGCTCTGGACTTATCACCCCAGGAGAACTGAACCCGGACCTGCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CCA 90 bp GAACCTCAGGGTCTCGTCTCCAGCACCAGTGACGATGGCCTCCCCATCAGGGGACATCTCTGTGACGCGTaGCATCGTGTTCTCATTCTG +
Preference number: 4 (lower is better)
Translates to: EPQGLVSSTSDDGLPIRGHLCDA*HRVLIL
Trigger: CAGAATGAGAACACGATGCCACGCGTCACAGAGATG...TCCCCTGATGGGGAGGCCATCGTCACTGGTGCTGGAGACGAGACCCTGAGGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591290.5
CDS-3UTR CCA 90 bp GACTCCTTTGTCGAACGGGTTTTGCTAAAGACGTTCCAGAACCTCAGGGTCTCGGGTCTCCGTGCTTGCTaGGCGAGGACACTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: DSFVERVLLKTFQNLRVSGLRAC*ARTLGS
Trigger: GCTCCCCAGTGTCCTCGCCCAGCAAGCACGGAGACC...CGAGACCCTGAGGTTCTGGAACGTCTTTAGCAAAACCCGTTCGACAAAGGAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591290.5
CDS-3UTR CCA 90 bp CGGGTTTTGCTAAAGACGTTCCAGAACCTCAGGGTCTCGTCTCCAGCACCAGTGAGTTCACGCTCCAGTTaGCTCCGGCTCTGGAGGGGA +
Preference number: 4 (lower is better)
Translates to: RVLLKTFQNLRVSSPAPVSSRSS*LRLWRG
Trigger: TCCCCTCCAGAGCCGGAGCCAACTGGAGCGTGAACT...CACTGGTGCTGGAGACGAGACCCTGAGGTTCTGGAACGTCTTTAGCAAAACCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591290.5
CDS-3UTR CCA 90 bp GTGAGCAGGTCCGGGTTCAGTTCTCCTGGGGTGATAAGTCCAGAGCAGACATCCCTGAGGTGGCGTCCTTaGCTTTCCGGTTCTGACTGG +
Preference number: 4 (lower is better)
Translates to: VSRSGFSSPGVISPEQTSLRWRP*LSGSDW
Trigger: CCAGTCAGAACCGGAAAGCCAAGGACGCCACCTCAG...GGATGTCTGCTCTGGACTTATCACCCCAGGAGAACTGAACCCGGACCTGCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CCA 90 bp ACATGCCTTGGTCTGGCCTTGGGGCTGGTCTTGGGTTTGACATGGTGGGGTGCAGCCAGATTGCACACTTaGGAGCCCGTGTCGATACAC +
Preference number: 4 (lower is better)
Translates to: TCLGLALGLVLGLTWWGAARLHT*EPVSIH
Trigger: GTGTATCGACACGGGCTCCCAAGTGTGCAATCTGGC...TGCACCCCACCATGTCAAACCCAAGACCAGCCCCAAGGCCAGACCAAGGCATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CCA 90 bp GACGGTCTGAGCCGGGACCGTCCAATGTGGTTCTCGCCCTTTGGGAAGGGAGACGTCTTGGGTTTGACATaGTGGGGTGCAGCCATGAAT +
Preference number: 4 (lower is better)
Translates to: DGLSRDRPMWFSPFGKGDVLGLT*WGAAMN
Trigger: ATTCATGGCTGCACCCCACCATGTCAAACCCAAGAC...GTCTCCCTTCCCAAAGGGCGAGAACCACATTGGACGGTCCCGGCTCAGACCGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CCA 90 bp CTGCTGAGGGTCCCCGACCACGTGCCCACCCCAGATACTGGTGGACATGGTTCAGAATGCACGAAGACGTaGCATCTGTTGTGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: LLRVPDHVPTPDTGGHGSECTKT*HLLCSS
Trigger: AGAGGAGCACAACAGATGCCACGTCTTCGTGCATTC...TGAACCATGTCCACCAGTATCTGGGGTGGGCACGTGGTCGGGGACCCTCAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CCA 90 bp GAGGGTCCCCGACCACGTGCCCACCCCAGATACTGGTGGACATGGTTCACAATCGCAAAGGCAGTACTGTaGCATGAAAACCCCACCCTG +
Preference number: 4 (lower is better)
Translates to: EGPRPRAHPRYWWTWFTIAKAVL*HENPTL
Trigger: CAGGGTGGGGTTTTCATGCCACAGTACTGCCTTTGC...GATTGTGAACCATGTCCACCAGTATCTGGGGTGGGCACGTGGTCGGGGACCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000652521.1
CDS-3UTR TCA 90 bp TCCAGCACCAGTGACGATGGCCTCCCCATCAGGGGACATTGCCAGGTACAGCACTTGGCTTTCCGGTTCTaGCTGGGAGACTTCTCATTC +
Preference number: 4 (lower is better)
Translates to: SSTSDDGLPIRGHCQVQHLAFRF*LGDFSF
Trigger: GAATGAGAAGTCTCCCAGTCAGAACCGGAAAGCCAA...GTGCTGTACCTGGCAATGTCCCCTGATGGGGAGGCCATCGTCACTGGTGCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591290.5
CDS-3UTR TCA 90 bp CTCAGGCCCCCACCAATCAGCCCTGGCGTCTGGTGGTCTGTTCTGTGCAGACGTCGTCACTGCATTACATaGGAAACAAGGCTGGTCTGT +
Preference number: 4 (lower is better)
Translates to: LRPPPISPGVWWSVLCRRRHCIT*ETRLVC
Trigger: ACAGACCAGCCTTGTTTCTCATGTAATGCAGTGACG...ACGTCTGCACAGAACAGACCACCAGACGCCAGGGCTGATTGGTGGGGGCCTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR TCA 90 bp GGCATCCGTCGCTCTGAGTACAGACGGTCTGAGCCGGGACCGTCCAATGTGGTTAGTCCCGGCCACACATaGATCCACGTGTTTAATGAC +
Preference number: 4 (lower is better)
Translates to: GIRRSEYRRSEPGPSNVVSPGHT*IHVFND
Trigger: GTCATTAAACACGTGGATTCATGTGTGGCCGGGACT...AACCACATTGGACGGTCCCGGCTCAGACCGTCTGTACTCAGAGCGACGGATGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR GCA 90 bp GTGATAAGTCCAGAGCAGACATCCTCCTCCAGTGTGAGGGTGACGCTTGGCCAGTGGTGGTCTGTTCTGTaGAGACGTGGGCAGTTCCAG +
Preference number: 4 (lower is better)
Translates to: VISPEQTSSSSVRVTLGQWWSVL*RRGQFQ
Trigger: CTGGAACTGCCCACGTCTGCACAGAACAGACCACCA...CTGGCCAAGCGTCACCCTCACACTGGAGGAGGATGTCTGCTCTGGACTTATCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR GCA 90 bp GTGATAAGTCCAGAGCAGACATCCTCCTCCAGTGTGAGGGTGACGCTTGGCCAGCCACAGATACGACCCTaGCTTTCCCATCTGGACACG +
Preference number: 4 (lower is better)
Translates to: VISPEQTSSSSVRVTLGQPQIRP*LSHLDT
Trigger: CGTGTCCAGATGGGAAAGGCAGGGTCGTATCTGTGG...CTGGCCAAGCGTCACCCTCACACTGGAGGAGGATGTCTGCTCTGGACTTATCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR GCA 90 bp TCTCCAGCACCAGTGACGATGGCCTCCCCATCAGGGGACATTGCCAGGTACAGCCCCGTGTCGATACACTaGAGTGGTTGTCCTTGTTGT +
Preference number: 4 (lower is better)
Translates to: SPAPVTMASPSGDIARYSPVSIH*SGCPCC
Trigger: ACAACAAGGACAACCACTGCAGTGTATCGACACGGG...GCTGTACCTGGCAATGTCCCCTGATGGGGAGGCCATCGTCACTGGTGCTGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000591290.5
CDS-3UTR CCA 90 bp GCCTACATGCCTTGGTCTGGCCTTGGGGCTGGTCTTGGGTTTGACATGGTGGGGCATCTCTGTGACGCGTaGCATCGTGTTCTCATTCTG +
Preference number: 4 (lower is better)
Translates to: AYMPWSGLGAGLGFDMVGHLCDA*HRVLIL
Trigger: CAGAATGAGAACACGATGCCACGCGTCACAGAGATG...CCCCACCATGTCAAACCCAAGACCAGCCCCAAGGCCAGACCAAGGCATGTAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CCA 90 bp CGGGTTTTGCTAAAGACGTTCCAGAACCTCAGGGTCTCGTCTCCAGCACCAGTGGCTCGTTGGCGTGCTTaGACCAGGCCAGATTGCACA +
Preference number: 4 (lower is better)
Translates to: RVLLKTFQNLRVSSPAPVARWRA*TRPDCT
Trigger: TGTGCAATCTGGCCTGGTCCAAGCACGCCAACGAGC...CACTGGTGCTGGAGACGAGACCCTGAGGTTCTGGAACGTCTTTAGCAAAACCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591290.5
CDS-3UTR CCA 90 bp GGGGTGATAAGTCCAGAGCAGACATCCTCCTCCAGTGTGAGGGTGACGCTTGGCGCCCACCCCAGATACTaGTGGACATGGTTCACAATC +
Preference number: 4 (lower is better)
Translates to: GVISPEQTSSSSVRVTLGAHPRY*WTWFTI
Trigger: GATTGTGAACCATGTCCACCAGTATCTGGGGTGGGC...GCCAAGCGTCACCCTCACACTGGAGGAGGATGTCTGCTCTGGACTTATCACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CCA 90 bp CGCCCCACCCAGACAGAGGTGGGGAGAGTCTCTCCAGTGAATGTGGAAGATCGACGGGTTCAGTTCTCCTaGGGTGATAAGTCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: RPTQTEVGRVSPVNVEDRRVQFS*GDKSRA
Trigger: TGCTCTGGACTTATCACCCCAGGAGAACTGAACCCG...TCGATCTTCCACATTCACTGGAGAGACTCTCCCCACCTCTGTCTGGGTGGGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR CCA 90 bp AGATACTGGTGGACATGGTTCACAATCAGGCATTTAATGAGACTCCAGGATCCTCTCACGCCGTCCGCCTaGCCCTGCGGCGGTTCCCAG +
Preference number: 4 (lower is better)
Translates to: RYWWTWFTIRHLMRLQDPLTPSA*PCGGSQ
Trigger: CTGGGAACCGCCGCAGGGCCAGGCGGACGGCGTGAG...AGGATCCTGGAGTCTCATTAAATGCCTGATTGTGAACCATGTCCACCAGTATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR CCA 90 bp GTGAGCAGGTCCGGGTTCAGTTCTCCTGGGGTGATAAGTCCAGAGCAGACATCCCATGAGAAACAAGGCTaGTCTGTCCTGGGAGCTCCC +
Preference number: 4 (lower is better)
Translates to: VSRSGFSSPGVISPEQTSHEKQG*SVLGAP
Trigger: GGGAGCTCCCAGGACAGACCAGCCTTGTTTCTCATG...GGATGTCTGCTCTGGACTTATCACCCCAGGAGAACTGAACCCGGACCTGCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR CCA 90 bp GGCAACCGGGGTCTCAGGCCCCCACCAATCAGCCCTGGCGTCTGGTGGTCTGTTTCATCGCAGAACCTATaGCAGCCTGAGTTTTTCAAT +
Preference number: 4 (lower is better)
Translates to: GNRGLRPPPISPGVWWSVSSQNL*QPEFFN
Trigger: ATTGAAAAACTCAGGCTGCCATAGGTTCTGCGATGA...AACAGACCACCAGACGCCAGGGCTGATTGGTGGGGGCCTGAGACCCCGGTTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR TCA 90 bp CCGGATCCTGGTGAAGAGGTTGAGCACAGACACAGACTCCTTTGTCGAACGGGTGTCTTTGCCGTTGTCTaGGGTGGCGTCCTTGGCTTT +
Preference number: 4 (lower is better)
Translates to: PDPGEEVEHRHRLLCRTGVFAVV*GGVLGF
Trigger: AAAGCCAAGGACGCCACCTCAGACAACGGCAAAGAC...ACCCGTTCGACAAAGGAGTCTGTGTCTGTGCTCAACCTCTTCACCAGGATCCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591290.5
CDS-3UTR TCA 90 bp CGCTGGCCCTGTGAGGGCACGTGTTGGCGAATGCACGAAGACGTGGCATCTGTTGAAGATCGACCCGCTTaGAATGACGGGGCTTTAAAA +
Preference number: 4 (lower is better)
Translates to: RWPCEGTCWRMHEDVASVEDRPA*NDGALK
Trigger: TTTTAAAGCCCCGTCATTTCAAGCGGGTCGATCTTC...AACAGATGCCACGTCTTCGTGCATTCGCCAACACGTGCCCTCACAGGGCCAGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR TCA 90 bp GCCTACATGCCTTGGTCTGGCCTTGGGGCTGGTCTTGGGTTTGACATGGTGGGGGAAACAGTAAGACCGTaGCCACTGGAAATCCACACT +
Preference number: 4 (lower is better)
Translates to: AYMPWSGLGAGLGFDMVGETVRP*PLEIHT
Trigger: AGTGTGGATTTCCAGTGGTCACGGTCTTACTGTTTC...CCCCACCATGTCAAACCCAAGACCAGCCCCAAGGCCAGACCAAGGCATGTAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR GCA 90 bp TTGAGCACAGACACAGACTCCTTTGTCGAACGGGTTTTGCTAAAGACGTTCCAGAGCGGTCTCCGTGCTTaGTGGGCGAGGACACTGGGG +
Preference number: 4 (lower is better)
Translates to: LSTDTDSFVERVLLKTFQSGLRA*WARTLG
Trigger: CCCCAGTGTCCTCGCCCAGCAAGCACGGAGACCGCT...CTGGAACGTCTTTAGCAAAACCCGTTCGACAAAGGAGTCTGTGTCTGTGCTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591290.5
CDS-3UTR GCA 90 bp GAACGGGTTTTGCTAAAGACGTTCCAGAACCTCAGGGTCTCGTCTCCAGCACCATGGACCAGGCCAGATTaGACACTTGGGAGCCCGTGT +
Preference number: 4 (lower is better)
Translates to: ERVLLKTFQNLRVSSPAPWTRPD*TLGSPC
Trigger: ACACGGGCTCCCAAGTGTGCAATCTGGCCTGGTCCA...TGGTGCTGGAGACGAGACCCTGAGGTTCTGGAACGTCTTTAGCAAAACCCGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591290.5
CDS-3UTR GCA 90 bp ACGGGTTTTGCTAAAGACGTTCCAGAACCTCAGGGTCTCGTCTCCAGCACCAGTACCAGCTCGTTGGCGTaGTTGGACCAGGCCAGATTG +
Preference number: 4 (lower is better)
Translates to: TGFAKDVPEPQGLVSSTSTSSLA*LDQARL
Trigger: CAATCTGGCCTGGTCCAAGCACGCCAACGAGCTGGT...ACTGGTGCTGGAGACGAGACCCTGAGGTTCTGGAACGTCTTTAGCAAAACCCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591290.5
CDS-3UTR CCA 90 bp AACCTCAGGGTCTCGTCTCCAGCACCAGTGACGATGGCCTCCCCATCAGGGGACTTCTCGTTAATCCTGTaGAAGTTCACGCTCCAGTTG +
Preference number: 4 (lower is better)
Translates to: NLRVSSPAPVTMASPSGDFSLIL*KFTLQL
Trigger: CAACTGGAGCGTGAACTTCCACAGGATTAACGAGAA...GTCCCCTGATGGGGAGGCCATCGTCACTGGTGCTGGAGACGAGACCCTGAGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591290.5
CDS-3UTR CCA 90 bp GTCTCCAGCACCAGTGACGATGGCCTCCCCATCAGGGGACATTGCCAGGTACAGCTTTCCGGTTCTGACTaGGAGACTTCTCATTCTCGT +
Preference number: 4 (lower is better)
Translates to: VSSTSDDGLPIRGHCQVQLSGSD*ETSHSR
Trigger: ACGAGAATGAGAAGTCTCCCAGTCAGAACCGGAAAG...CTGTACCTGGCAATGTCCCCTGATGGGGAGGCCATCGTCACTGGTGCTGGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591290.5
CDS-3UTR CCA 90 bp ACATGCCTTGGTCTGGCCTTGGGGCTGGTCTTGGGTTTGACATGGTGGGGTGCAGTCTTGGGTTTGACATaGTGGGGTGCAGCCATGAAT +
Preference number: 4 (lower is better)
Translates to: TCLGLALGLVLGLTWWGAVLGLT*WGAAMN
Trigger: ATTCATGGCTGCACCCCACCATGTCAAACCCAAGAC...TGCACCCCACCATGTCAAACCCAAGACCAGCCCCAAGGCCAGACCAAGGCATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CCA 90 bp ACATGCCTTGGTCTGGCCTTGGGGCTGGTCTTGGGTTTGACATGGTGGGGTGCAGAATGCACGAAGACGTaGCATCTGTTGTGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: TCLGLALGLVLGLTWWGAECTKT*HLLCSS
Trigger: AGAGGAGCACAACAGATGCCACGTCTTCGTGCATTC...TGCACCCCACCATGTCAAACCCAAGACCAGCCCCAAGGCCAGACCAAGGCATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CCA 90 bp AGTGACGATGGCCTCCCCATCAGGGGACATTGCCAGGTACAGCACGCGGTAGGAGTCGATACACTGCAGTaGTTGTCCTTGTTGTCGTTG +
Preference number: 4 (lower is better)
Translates to: SDDGLPIRGHCQVQHAVGVDTLQ*LSLLSL
Trigger: CAACGACAACAAGGACAACCACTGCAGTGTATCGAC...TCCTACCGCGTGCTGTACCTGGCAATGTCCCCTGATGGGGAGGCCATCGTCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591290.5
CDS-3UTR CCA 90 bp CAGCCTGGGAGCATGAGACAGAGAAGCAGAGGAGCCTGGGAAGCTTCTCGAAGGGTAGCTTGTACCCCTTaGCACACCAAAAACCAGGCA +
Preference number: 4 (lower is better)
Translates to: QPGSMRQRSRGAWEASRRVACTP*HTKNQA
Trigger: TGCCTGGTTTTTGGTGTGCCAAGGGGTACAAGCTAC...CCTTCGAGAAGCTTCCCAGGCTCCTCTGCTTCTCTGTCTCATGCTCCCAGGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652521.1
CDS-3UTR TCA 90 bp TTGAGCACAGACACAGACTCCTTTGTCGAACGGGTTTTGCTAAAGACGTTCCAGCGTCTCCAGCACCAGTaGCGATGGCCTCCCCATCAG +
Preference number: 4 (lower is better)
Translates to: LSTDTDSFVERVLLKTFQRLQHQ*RWPPHQ
Trigger: CTGATGGGGAGGCCATCGTCACTGGTGCTGGAGACG...CTGGAACGTCTTTAGCAAAACCCGTTCGACAAAGGAGTCTGTGTCTGTGCTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591290.5
CDS-3UTR GCA 90 bp GACTCCTTTGTCGAACGGGTTTTGCTAAAGACGTTCCAGAACCTCAGGGTCTCGGCTGCGTCCCAGATCTaGACGAAGCCCTTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: DSFVERVLLKTFQNLRVSAASQI*TKPLCV
Trigger: CACACACAAGGGCTTCGTGCAGATCTGGGACGCAGC...CGAGACCCTGAGGTTCTGGAACGTCTTTAGCAAAACCCGTTCGACAAAGGAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591290.5
CDS-3UTR CCA 90 bp GGGGTGATAAGTCCAGAGCAGACATCCTCCTCCAGTGTGAGGGTGACGCTTGGCATCGTGTTCTCATTCTaGATGACGATCTGGCGAAGC +
Preference number: 4 (lower is better)
Translates to: GVISPEQTSSSSVRVTLGIVFSF*MTIWRS
Trigger: GCTTCGCCAGATCGTCATCCAGAATGAGAACACGAT...GCCAAGCGTCACCCTCACACTGGAGGAGGATGTCTGCTCTGGACTTATCACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CCA 90 bp GCCTACATGCCTTGGTCTGGCCTTGGGGCTGGTCTTGGGTTTGACATGGTGGGGTTCTCGTTAATCCTGTaGAAGTTCACGCTCCAGTTG +
Preference number: 4 (lower is better)
Translates to: AYMPWSGLGAGLGFDMVGFSLIL*KFTLQL
Trigger: CAACTGGAGCGTGAACTTCCACAGGATTAACGAGAA...CCCCACCATGTCAAACCCAAGACCAGCCCCAAGGCCAGACCAAGGCATGTAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CCA 90 bp TCAGCTGTCCTGGGCCATGGGGAACCAATTCCCCCATTTCTACACGAGCCCTGGCTTTCCGGTTCTGACTaGGAGACTTCTCATTCTCGT +
Preference number: 4 (lower is better)
Translates to: SAVLGHGEPIPPFLHEPWLSGSD*ETSHSR
Trigger: ACGAGAATGAGAAGTCTCCCAGTCAGAACCGGAAAG...CCAGGGCTCGTGTAGAAATGGGGGAATTGGTTCCCCATGGCCCAGGACAGCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR CCA 90 bp TGCAAGCTGAGGAGCTGGGGTCCTCCGACTCTGGACAGCTGGTGTGGCACGGTCAGATACTGGTGGACATaGTTCACAATCAGGCATTTA +
Preference number: 4 (lower is better)
Translates to: CKLRSWGPPTLDSWCGTVRYWWT*FTIRHL
Trigger: TAAATGCCTGATTGTGAACCATGTCCACCAGTATCT...GACCGTGCCACACCAGCTGTCCAGAGTCGGAGGACCCCAGCTCCTCAGCTTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CCA 90 bp CTCAGGCCCCCACCAATCAGCCCTGGCGTCTGGTGGTCTGTTCTGTGCAGACGTGGGCGAAGGCAGGGTTaGTTTTCTTATTTAAAAACC +
Preference number: 4 (lower is better)
Translates to: LRPPPISPGVWWSVLCRRGRRQG*FSYLKT
Trigger: GGTTTTTAAATAAGAAAACCAACCCTGCCTTCGCCC...ACGTCTGCACAGAACAGACCACCAGACGCCAGGGCTGATTGGTGGGGGCCTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR TCA 90 bp GACACAGACTCCTTTGTCGAACGGGTTTTGCTAAAGACGTTCCAGAACCTCAGGCCAGCAGCTCATTCTTaGGCAGGGCAGAGTAGGCCA +
Preference number: 4 (lower is better)
Translates to: DTDSFVERVLLKTFQNLRPAAHS*AGQSRP
Trigger: TGGCCTACTCTGCCCTGCTCAAGAATGAGCTGCTGG...CCTGAGGTTCTGGAACGTCTTTAGCAAAACCCGTTCGACAAAGGAGTCTGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591290.5
CDS-3UTR TCA 90 bp AGATACTGGTGGACATGGTTCACAATCAGGCATTTAATGAGACTCCAGGATCCTGGTGGGGTGCAGCCATaGATGGGCAACCGGGGTCTC +
Preference number: 4 (lower is better)
Translates to: RYWWTWFTIRHLMRLQDPGGVQP*MGNRGL
Trigger: GAGACCCCGGTTGCCCATTCATGGCTGCACCCCACC...AGGATCCTGGAGTCTCATTAAATGCCTGATTGTGAACCATGTCCACCAGTATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR TCA 90 bp GCCTACATGCCTTGGTCTGGCCTTGGGGCTGGTCTTGGGTTTGACATGGTGGGGGAACCTATGGCAGCCTaGGTTTTTCAATTCTCTTTC +
Preference number: 4 (lower is better)
Translates to: AYMPWSGLGAGLGFDMVGEPMAA*VFQFSF
Trigger: GAAAGAGAATTGAAAAACTCAGGCTGCCATAGGTTC...CCCCACCATGTCAAACCCAAGACCAGCCCCAAGGCCAGACCAAGGCATGTAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR GCA 90 bp GTTGAGCACAGACACAGACTCCTTTGTCGAACGGGTTTTGCTAAAGACGTTCCAGGACAGCTTCTTCCCTaGGGCTGCGTCCCAGATCTG +
Preference number: 4 (lower is better)
Translates to: VEHRHRLLCRTGFAKDVPGQLLP*GCVPDL
Trigger: CAGATCTGGGACGCAGCCGCAGGGAAGAAGCTGTCC...TGGAACGTCTTTAGCAAAACCCGTTCGACAAAGGAGTCTGTGTCTGTGCTCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591290.5
CDS-3UTR CCA 90 bp TCCTGGGCCATGGGGAACCAATTCCCCCATTTCTACACGAGCCCTGGCCCATCATTCTCGTTAATCCTGTaGAAGTTCACGCTCCAGTTG +
Preference number: 4 (lower is better)
Translates to: SWAMGNQFPHFYTSPGPSFSLIL*KFTLQL
Trigger: CAACTGGAGCGTGAACTTCCACAGGATTAACGAGAA...TGATGGGCCAGGGCTCGTGTAGAAATGGGGGAATTGGTTCCCCATGGCCCAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR CCA 90 bp GTGATAAGTCCAGAGCAGACATCCTCCTCCAGTGTGAGGGTGACGCTTGGCCAGCTTTCCGGTTCTGACTaGGAGACTTCTCATTCTCGT +
Preference number: 4 (lower is better)
Translates to: VISPEQTSSSSVRVTLGQLSGSD*ETSHSR
Trigger: ACGAGAATGAGAAGTCTCCCAGTCAGAACCGGAAAG...CTGGCCAAGCGTCACCCTCACACTGGAGGAGGATGTCTGCTCTGGACTTATCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CCA 90 bp GACACAGACTCCTTTGTCGAACGGGTTTTGCTAAAGACGTTCCAGAACCTCAGGTGCCGTTGTCTGAGGTaGCGTCCTTGGCTTTCCGGT +
Preference number: 4 (lower is better)
Translates to: DTDSFVERVLLKTFQNLRCRCLR*RPWLSG
Trigger: ACCGGAAAGCCAAGGACGCCACCTCAGACAACGGCA...CCTGAGGTTCTGGAACGTCTTTAGCAAAACCCGTTCGACAAAGGAGTCTGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591290.5
CDS-3UTR CCA 90 bp AGATACTGGTGGACATGGTTCACAATCAGGCATTTAATGAGACTCCAGGATCCTTCTGGACAGCTGGTGTaGCACGGTCCTGCCCGGCAG +
Preference number: 4 (lower is better)
Translates to: RYWWTWFTIRHLMRLQDPSGQLV*HGPARQ
Trigger: CTGCCGGGCAGGACCGTGCCACACCAGCTGTCCAGA...AGGATCCTGGAGTCTCATTAAATGCCTGATTGTGAACCATGTCCACCAGTATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CCA 90 bp GAAGACGTGGCATCTGTTGTGCTCCTCTCCAGCCAGGGCAGTGAGCAGGTCCGGAGATACTGGTGGACATaGTTCACAATCAGGCATTTA +
Preference number: 4 (lower is better)
Translates to: EDVASVVLLSSQGSEQVRRYWWT*FTIRHL
Trigger: TAAATGCCTGATTGTGAACCATGTCCACCAGTATCT...CCGGACCTGCTCACTGCCCTGGCTGGAGAGGAGCACAACAGATGCCACGTCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR GCA 90 bp AGATACTGGTGGACATGGTTCACAATCAGGCATTTAATGAGACTCCAGGATCCTCTGCGGTCCTCAGTCTaGGGGTCCTGCACCTTCTCG +
Preference number: 4 (lower is better)
Translates to: RYWWTWFTIRHLMRLQDPLRSSV*GSCTFS
Trigger: CGAGAAGGTGCAGGACCCGCAGACTGAGGACCGCAG...AGGATCCTGGAGTCTCATTAAATGCCTGATTGTGAACCATGTCCACCAGTATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CCA 90 bp CGGGTTTTGCTAAAGACGTTCCAGAACCTCAGGGTCTCGTCTCCAGCACCAGTGATCGTGTTCTCATTCTaGATGACGATCTGGCGAAGC +
Preference number: 4 (lower is better)
Translates to: RVLLKTFQNLRVSSPAPVIVFSF*MTIWRS
Trigger: GCTTCGCCAGATCGTCATCCAGAATGAGAACACGAT...CACTGGTGCTGGAGACGAGACCCTGAGGTTCTGGAACGTCTTTAGCAAAACCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591290.5
CDS-3UTR CCA 90 bp AGCACAGACACAGACTCCTTTGTCGAACGGGTTTTGCTAAAGACGTTCCAGAACCTGAGGTGGCGTCCTTaGCTTTCCGGTTCTGACTGG +
Preference number: 4 (lower is better)
Translates to: STDTDSFVERVLLKTFQNLRWRP*LSGSDW
Trigger: CCAGTCAGAACCGGAAAGCCAAGGACGCCACCTCAG...GTTCTGGAACGTCTTTAGCAAAACCCGTTCGACAAAGGAGTCTGTGTCTGTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591290.5
CDS-3UTR CCA 90 bp AGATACTGGTGGACATGGTTCACAATCAGGCATTTAATGAGACTCCAGGATCCTGGGTGCAGCCATGAATaGGCAACCGGGGTCTCAGGC +
Preference number: 4 (lower is better)
Translates to: RYWWTWFTIRHLMRLQDPGCSHE*ATGVSG
Trigger: GCCTGAGACCCCGGTTGCCCATTCATGGCTGCACCC...AGGATCCTGGAGTCTCATTAAATGCCTGATTGTGAACCATGTCCACCAGTATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR TCA 90 bp AGATACTGGTGGACATGGTTCACAATCAGGCATTTAATGAGACTCCAGGATCCTGGGCTCAGGCTCGAGTaGTTCCAGACCAGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: RYWWTWFTIRHLMRLQDPGLRLE*FQTSSL
Trigger: CAAGCTGCTGGTCTGGAATCACTCGAGCCTGAGCCC...AGGATCCTGGAGTCTCATTAAATGCCTGATTGTGAACCATGTCCACCAGTATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR GCA 90 bp AGATACTGGTGGACATGGTTCACAATCAGGCATTTAATGAGACTCCAGGATCCTGATCAACAGAAAAGTTaGAGCCCGCCCTGCGGGGCC +
Preference number: 4 (lower is better)
Translates to: RYWWTWFTIRHLMRLQDPDQQKS*SPPCGA
Trigger: GGCCCCGCAGGGCGGGCTGCAACTTTTCTGTTGATC...AGGATCCTGGAGTCTCATTAAATGCCTGATTGTGAACCATGTCCACCAGTATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441788.7
3UTR CAA 72 bp TTGAGCACAGACACAGACTCCTTTGTCGAACGGGTTTaGCTAAAGACGTTCCAGAACCTCAGGGTCTCGTCT +
Preference number: 4 (lower is better)
Translates to: LSTDTDSFVERV*LKTFQNLRVSS
Trigger: AGACGAGACCCTGAGGTTCTGGAACGTCTTTAGCAAAACCCGTTCGACAAAGGAGTCTGTGTCTGTGCTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591290.5
CDS CCA 90 bp CACCTTGCAGGGCAGCAGGGACTCTGGCTCGCTCCCGTGGCTCGCTaGCTCCCGCCGACCCCGCCTCTCCTGGCACCGCACAGCGCCCGC +
Preference number: 5 (lower is better)
Translates to: HLAGQQGLWLAPVAR*LPPTPPLLAPHSAR
Trigger: GCGGGCGCTGTGCGGTGCCAGGAGAGGCGGGGTCGGCGGGAGCCAGCGAGCCACGGGAGCGAGCCAGAGTCCCTGCTGCCCTGCAAGGTG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652521.1
CDS GCA 90 bp CCTGCCGGTGGCCCTGCAGCCGCCGCTCCGACTGCAGTGGCGGGGTaGGGATGTCCCTCTGCAGGATCATGCGGTCGCGGCTCCCGGACG +
Preference number: 5 (lower is better)
Translates to: PAGGPAAAAPTAVAG*GCPSAGSCGRGSRT
Trigger: CGTCCGGGAGCCGCGACCGCATGATCCTGCAGAGGGACATCCGCACCCCGCCACTGCAGTCGGAGCGGCGGCTGCAGGGCCACCGGCAGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313639.8
ENST00000395095.7
ENST00000441788.7
ENST00000591290.5
ENST00000652521.1
CDS GCA 90 bp AGCCCGCACACCTCCTGCCGGTGGCCCTGCAGCCGCCGCTCCGACTaGAGTGGCGGGGTGCGGATGTCCCTCTGCAGGATCATGCGGTCG +
Preference number: 5 (lower is better)
Translates to: SPHTSCRWPCSRRSD*SGGVRMSLCRIMRS
Trigger: CGACCGCATGATCCTGCAGAGGGACATCCGCACCCCGCCACTGCAGTCGGAGCGGCGGCTGCAGGGCCACCGGCAGGAGGTGTGCGGGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313639.8
ENST00000395095.7
ENST00000441788.7
ENST00000591290.5
ENST00000652521.1
CDS CCA 90 bp GCACACCTCCTGCCGGTGGCCCTGCAGCCGCCGCTCCGACTGCAGTaGCGGGGTGCGGATGTCCCTCTGCAGGATCATGCGGTCGCGGCT +
Preference number: 5 (lower is better)
Translates to: AHLLPVALQPPLRLQ*RGADVPLQDHAVAA
Trigger: AGCCGCGACCGCATGATCCTGCAGAGGGACATCCGCACCCCGCCACTGCAGTCGGAGCGGCGGCTGCAGGGCCACCGGCAGGAGGTGTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313639.8
ENST00000395095.7
ENST00000441788.7
ENST00000591290.5
ENST00000652521.1
CDS GCA 90 bp TGGTCTGTGGACCACTTGAGCCCGCACACCTCCTGCCGGTGGCCCTaGAGCCGCCGCTCCGACTGCAGTGGCGGGGTGCGGATGTCCCTC +
Preference number: 5 (lower is better)
Translates to: WSVDHLSPHTSCRWP*SRRSDCSGGVRMSL
Trigger: GAGGGACATCCGCACCCCGCCACTGCAGTCGGAGCGGCGGCTGCAGGGCCACCGGCAGGAGGTGTGCGGGCTCAAGTGGTCCACAGACCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313639.8
ENST00000395095.7
ENST00000441788.7
ENST00000591290.5
ENST00000652521.1
CDS CCA 90 bp AGCTGGTGGTCTGTGGACCACTTGAGCCCGCACACCTCCTGCCGGTaGCCCTGCAGCCGCCGCTCCGACTGCAGTGGCGGGGTGCGGATG +
Preference number: 5 (lower is better)
Translates to: SWWSVDHLSPHTSCR*PCSRRSDCSGGVRM
Trigger: CATCCGCACCCCGCCACTGCAGTCGGAGCGGCGGCTGCAGGGCCACCGGCAGGAGGTGTGCGGGCTCAAGTGGTCCACAGACCACCAGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313639.8
ENST00000395095.7
ENST00000441788.7
ENST00000591290.5
ENST00000652521.1
CDS-3UTR CAA 90 bp GCCCGCCCAGCCGCCTTCCTCGGGGGACAAGCGCTGGGAAGGCAGAGTCCATGCCGACAAGGCGGCTCTTaGGCAACTGCGGGCAGGGGC +
Preference number: 5 (lower is better)
Translates to: ARPAAFLGGQALGRQSPCRQGGS*ATAGRG
Trigger: GCCCCTGCCCGCAGTTGCCAAAGAGCCGCCTTGTCG...GCATGGACTCTGCCTTCCCAGCGCTTGTCCCCCGAGGAAGGCGGCTGGGCGGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS GCA 90 bp ATGTCCCTCTGCAGGATCATGCGGTCGCGGCTCCCGGACGACAGCTaGTCAGCATTCCAGGCCAGCGCCCCGACGCGTGCCGTGTGGCCC +
Preference number: 5 (lower is better)
Translates to: MSLCRIMRSRLPDDS*SAFQASAPTRAVWP
Trigger: GGGCCACACGGCACGCGTCGGGGCGCTGGCCTGGAATGCTGAGCAGCTGTCGTCCGGGAGCCGCGACCGCATGATCCTGCAGAGGGACAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313639.8
ENST00000395095.7
ENST00000441788.7
ENST00000591290.5
ENST00000652521.1
CDS GCA 90 bp TGCAGCCGCCGCTCCGACTGCAGTGGCGGGGTGCGGATGTCCCTCTaGAGGATCATGCGGTCGCGGCTCCCGGACGACAGCTGCTCAGCA +
Preference number: 5 (lower is better)
Translates to: CSRRSDCSGGVRMSL*RIMRSRLPDDSCSA
Trigger: TGCTGAGCAGCTGTCGTCCGGGAGCCGCGACCGCATGATCCTGCAGAGGGACATCCGCACCCCGCCACTGCAGTCGGAGCGGCGGCTGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313639.8
ENST00000395095.7
ENST00000441788.7
ENST00000591290.5
ENST00000652521.1
CDS GCA 90 bp CGGCTCCATGCAGGTCGCCCAGCACTGGCGGCTTCACAAGCCCCATaGAGCCAGCAGGCGACTCACCACGTAGACGCGGCTGCCGCAGGG +
Preference number: 5 (lower is better)
Translates to: RLHAGRPALAASQAP*SQQATHHVDAAAAG
Trigger: CCCTGCGGCAGCCGCGTCTACGTGGTGAGTCGCCTGCTGGCTGCATGGGGCTTGTGAAGCCGCCAGTGCTGGGCGACCTGCATGGAGCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652521.1
CDS-3UTR CAA 90 bp TTGTGGCCGGCGCCCTGGCAGACGGGCCTGGGAGGCGTCTCTGCGGCCTTCGAGTGGTCTGTGGACCACTaGAGCCCGCACACCTCCTGC +
Preference number: 5 (lower is better)
Translates to: LWPAPWQTGLGGVSAAFEWSVDH*SPHTSC
Trigger: GCAGGAGGTGTGCGGGCTCAAGTGGTCCACAGACCA...CTCGAAGGCCGCAGAGACGCCTCCCAGGCCCGTCTGCCAGGGCGCCGGCCACAA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS GCA 90 bp ACAAGCCCCATGCAGCCAGCAGGCGACTCACCACGTAGACGCGGCTaGCGCAGGGCAGAGACGATCCGGACTGCCAGGGGCGTAGGGTCC +
Preference number: 5 (lower is better)
Translates to: TSPMQPAGDSPRRRG*RRAETIRTARGVGS
Trigger: GGACCCTACGCCCCTGGCAGTCCGGATCGTCTCTGCCCTGCGGCAGCCGCGTCTACGTGGTGAGTCGCCTGCTGGCTGCATGGGGCTTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652521.1
CDS-3UTR CAA 90 bp GCCCGCCCAGCCGCCTTCCTCGGGGGACAAGCGCTGGGAAGGCAGAGTCCATGCATCTGCACGAAGCCCTaGTGTGTGCCCACCGCCACC +
Preference number: 5 (lower is better)
Translates to: ARPAAFLGGQALGRQSPCICTKP*CVPTAT
Trigger: GGTGGCGGTGGGCACACACAAGGGCTTCGTGCAGAT...GCATGGACTCTGCCTTCCCAGCGCTTGTCCCCCGAGGAAGGCGGCTGGGCGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CAA 90 bp CTGGCAGACGGGCCTGGGAGGCGTCTCTGCGGCCTTCGAGGGCTGAGCTCCCCAGGGATCTTGGAGATCTaGCGGGTGGGTTTCCGGGGG +
Preference number: 5 (lower is better)
Translates to: LADGPGRRLCGLRGLSSPGILEI*RVGFRG
Trigger: CCCCCGGAAACCCACCCGCAAGATCTCCAAGATCCC...TGGGGAGCTCAGCCCTCGAAGGCCGCAGAGACGCCTCCCAGGCCCGTCTGCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR CAA 90 bp GCCCGCCCAGCCGCCTTCCTCGGGGGACAAGCGCTGGGAAGGCAGAGTCCATGCCTGGAGCGCAGGGACTaGCCTGGAGTCCAGTCCTTG +
Preference number: 5 (lower is better)
Translates to: ARPAAFLGGQALGRQSPCLERRD*PGVQSL
Trigger: CAAGGACTGGACTCCAGGCAAGTCCCTGCGCTCCAG...GCATGGACTCTGCCTTCCCAGCGCTTGTCCCCCGAGGAAGGCGGCTGGGCGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS GCA 90 bp GCTCCGACTGCAGTGGCGGGGTGCGGATGTCCCTCTGCAGGATCATaGGGTCGCGGCTCCCGGACGACAGCTGCTCAGCATTCCAGGCCA +
Preference number: 5 (lower is better)
Translates to: APTAVAGCGCPSAGS*GRGSRTTAAQHSRP
Trigger: TGGCCTGGAATGCTGAGCAGCTGTCGTCCGGGAGCCGCGACCGCATGATCCTGCAGAGGGACATCCGCACCCCGCCACTGCAGTCGGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313639.8
ENST00000395095.7
ENST00000441788.7
ENST00000591290.5
ENST00000652521.1
CDS GCA 90 bp CCCTCCGCCCTCCTTGGGGTAGATCAGCCACCACCGTCGGCTCCATaGAGGTCGCCCAGCACTGGCGGCTTCACAAGCCCCATGCAGCCA +
Preference number: 5 (lower is better)
Translates to: PSALLGVDQPPPSAP*RSPSTGGFTSPMQP
Trigger: TGGCTGCATGGGGCTTGTGAAGCCGCCAGTGCTGGGCGACCTGCATGGAGCCGACGGTGGTGGCTGATCTACCCCAAGGAGGGCGGAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652521.1
CDS CCA 90 bp TCTGGAGGGGATGAAGCGGTCTCCGTGCTTGCTGGGCGAGGACACTaGGGAGCTGGCAGGCGTCAGGGTCCGCCGCATCTCTGTGACGCG +
Preference number: 5 (lower is better)
Translates to: SGGDEAVSVLAGRGH*GAGRRQGPPHLCDA
Trigger: CGCGTCACAGAGATGCGGCGGACCCTGACGCCTGCCAGCTCCCCAGTGTCCTCGCCCAGCAAGCACGGAGACCGCTTCATCCCCTCCAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313639.8
ENST00000395095.7
ENST00000441788.7
ENST00000588327.1
ENST00000591290.5
ENST00000652521.1
CDS CCA 90 bp GTGAGGCGGGGCAAGGCAGGGTGGGGGCCTGCAGGGCGGATGGGCTaGGACCCTAACCTTTGCCGTTGTCTGAGGTGGCGTCCTTGGCTT +
Preference number: 5 (lower is better)
Translates to: VRRGKAGWGPAGRMG*DPNLCRCLRWRPWL
Trigger: AAGCCAAGGACGCCACCTCAGACAACGGCAAAGGTTAGGGTCCCAGCCCATCCGCCCTGCAGGCCCCCACCCTGCCTTGCCCCGCCTCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588327.1
CDS-3UTR CAA 90 bp TTGTGGCCGGCGCCCTGGCAGACGGGCCTGGGAGGCGTCTCTGCGGCCTTCGAGAGCAGCTTCTGGCTCTaGTTGCTGACGGGAGACAGG +
Preference number: 5 (lower is better)
Translates to: LWPAPWQTGLGGVSAAFESSFWL*LLTGDR
Trigger: CCTGTCTCCCGTCAGCAACAAGAGCCAGAAGCTGCT...CTCGAAGGCCGCAGAGACGCCTCCCAGGCCCGTCTGCCAGGGCGCCGGCCACAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR CAA 90 bp CCTCCTCCCTGGAACAGGGCCGTCCAGCTGGAGCGCAGGGACTTGCCTGGAGTCCACCTCCTGGACCCCTaGGGTCTCCTTGGCTTCCCC +
Preference number: 5 (lower is better)
Translates to: PPPWNRAVQLERRDLPGVHLLDP*GLLGFP
Trigger: GGGGAAGCCAAGGAGACCCAAGGGGTCCAGGAGGTG...GACTCCAGGCAAGTCCCTGCGCTCCAGCTGGACGGCCCTGTTCCAGGGAGGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR CAA 90 bp AGGAAGAGCATGCGGCTCCGGTGGGCAGGTGATGAACAGACGGAGGCAGTGAGGCGCCCTGCGGGGCCCTaGGTCAGCCTCCCCCTCCAT +
Preference number: 5 (lower is better)
Translates to: RKSMRLRWAGDEQTEAVRRPAGP*VSLPLH
Trigger: ATGGAGGGGGAGGCTGACCAAGGGCCCCGCAGGGCG...CCTCACTGCCTCCGTCTGTTCATCACCTGCCCACCGGAGCCGCATGCTCTTCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS TCA 90 bp GACGAACCAGCGCGGCCCTCCACACGCCAGAACACGACCCAGCCATaGAAGGAGCAAGGCTCTACCCAGGCCACAGCGCGGACACGCCCT +
Preference number: 5 (lower is better)
Translates to: DEPARPSTRQNTTQP*KEQGSTQATARTRP
Trigger: AGGGCGTGTCCGCGCTGTGGCCTGGGTAGAGCCTTGCTCCTTTCATGGCTGGGTCGTGTTCTGGCGTGTGGAGGGCCGCGCTGGTTCGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652521.1
CDS CCA 90 bp CATTCCAGGCCAGCGCCCCGACGCGTGCCGTGTGGCCCTCCAACATaGACAGCTTCTTCCCTGCGGCTGCGTCCCAGATCTGCACGAAGC +
Preference number: 5 (lower is better)
Translates to: HSRPAPRRVPCGPPT*TASSLRLRPRSARS
Trigger: GCTTCGTGCAGATCTGGGACGCAGCCGCAGGGAAGAAGCTGTCCATGTTGGAGGGCCACACGGCACGCGTCGGGGCGCTGGCCTGGAATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313639.8
ENST00000395095.7
ENST00000441788.7
ENST00000591290.5
ENST00000652521.1
CDS CCA 90 bp GGTAGATCAGCCACCACCGTCGGCTCCATGCAGGTCGCCCAGCACTaGCGGCTTCACAAGCCCCATGCAGCCAGCAGGCGACTCACCACG +
Preference number: 5 (lower is better)
Translates to: GRSATTVGSMQVAQH*RLHKPHAASRRLTT
Trigger: CGTGGTGAGTCGCCTGCTGGCTGCATGGGGCTTGTGAAGCCGCCAGTGCTGGGCGACCTGCATGGAGCCGACGGTGGTGGCTGATCTACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652521.1
CDS-3UTR CAA 90 bp TGCCAGGTACAGCACGCGGTAGGAGTGCCCGGTCAGCTTGGCCACCTGGGTCAGGTGCTCACCAGCTCGTaGGCGTGCTTGGACCAGGCC +
Preference number: 5 (lower is better)
Translates to: CQVQHAVGVPGQLGHLGQVLTSS*ACLDQA
Trigger: GGCCTGGTCCAAGCACGCCAACGAGCTGGTGAGCAC...CTGACCCAGGTGGCCAAGCTGACCGGGCACTCCTACCGCGTGCTGTACCTGGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591290.5
CDS-3UTR CAA 90 bp GAGGAGCCTGGGAAGCTTCTCGAAGGATGGAGGGCGCCCACCTCCTGGACCCCTTGGGGGACGCAAGTCTaGCGCAGGGAAGGAGGACGC +
Preference number: 5 (lower is better)
Translates to: EEPGKLLEGWRAPTSWTPWGTQV*RREGGR
Trigger: GCGTCCTCCTTCCCTGCGCAAGACTTGCGTCCCCCA...AGGGGTCCAGGAGGTGGGCGCCCTCCATCCTTCGAGAAGCTTCCCAGGCTCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CAA 90 bp TCTGTTCTGTGCAGACGTGGGCAGTTCCAGGAAGAGCATGCGGCTCCGGTGGGCCTTGGCCCTGCAGGATaGTGGCCGGCGCCCTGGCAG +
Preference number: 5 (lower is better)
Translates to: SVLCRRGQFQEEHAAPVGLGPAG*WPAPWQ
Trigger: CTGCCAGGGCGCCGGCCACAATCCTGCAGGGCCAAG...GCCCACCGGAGCCGCATGCTCTTCCTGGAACTGCCCACGTCTGCACAGAACAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS GCA 90 bp TCAGGCGTGGAGGGCTGCAGCCTGCGGTCCTCAGTCTGCGGGTCCTaGACCTTCTCGATGCCGGCACCCAGCAGCTCATTCTTGAGCAGG +
Preference number: 5 (lower is better)
Translates to: SGVEGCSLRSSVCGS*TFSMPAPSSSFLSR
Trigger: CCTGCTCAAGAATGAGCTGCTGGGTGCCGGCATCGAGAAGGTGCAGGACCCGCAGACTGAGGACCGCAGGCTGCAGCCCTCCACGCCTGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313639.8
ENST00000395095.7
ENST00000441788.7
ENST00000588327.1
ENST00000591290.5
ENST00000592214.1
ENST00000652521.1
CDS GCA 90 bp CCCTTCTTCTCAGGCGTGGAGGGCTGCAGCCTGCGGTCCTCAGTCTaGGGGTCCTGCACCTTCTCGATGCCGGCACCCAGCAGCTCATTC +
Preference number: 5 (lower is better)
Translates to: PFFSGVEGCSLRSSV*GSCTFSMPAPSSSF
Trigger: GAATGAGCTGCTGGGTGCCGGCATCGAGAAGGTGCAGGACCCGCAGACTGAGGACCGCAGGCTGCAGCCCTCCACGCCTGAGAAGAAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313639.8
ENST00000395095.7
ENST00000441788.7
ENST00000588327.1
ENST00000591290.5
ENST00000592214.1
ENST00000652521.1
CDS GCA 90 bp CCCTCCAACATGGACAGCTTCTTCCCTGCGGCTGCGTCCCAGATCTaGACGAAGCCCTTGTGTGTGCCCACCGCCACCAGGTTCCCCCGC +
Preference number: 5 (lower is better)
Translates to: PSNMDSFFPAAASQI*TKPLCVPTATRFPR
Trigger: GCGGGGGAACCTGGTGGCGGTGGGCACACACAAGGGCTTCGTGCAGATCTGGGACGCAGCCGCAGGGAAGAAGCTGTCCATGTTGGAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313639.8
ENST00000395095.7
ENST00000441788.7
ENST00000591290.5
ENST00000652521.1
CDS GCA 90 bp GCGTGCCGTGTGGCCCTCCAACATGGACAGCTTCTTCCCTGCGGCTaGGTCCCAGATCTGCACGAAGCCCTTGTGTGTGCCCACCGCCAC +
Preference number: 5 (lower is better)
Translates to: ACRVALQHGQLLPCG*VPDLHEALVCAHRH
Trigger: GTGGCGGTGGGCACACACAAGGGCTTCGTGCAGATCTGGGACGCAGCCGCAGGGAAGAAGCTGTCCATGTTGGAGGGCCACACGGCACGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313639.8
ENST00000395095.7
ENST00000441788.7
ENST00000591290.5
ENST00000652521.1
CDS GCA 90 bp CCCGACGCGTGCCGTGTGGCCCTCCAACATGGACAGCTTCTTCCCTaGGGCTGCGTCCCAGATCTGCACGAAGCCCTTGTGTGTGCCCAC +
Preference number: 5 (lower is better)
Translates to: PDACRVALQHGQLLP*GCVPDLHEALVCAH
Trigger: GTGGGCACACACAAGGGCTTCGTGCAGATCTGGGACGCAGCCGCAGGGAAGAAGCTGTCCATGTTGGAGGGCCACACGGCACGCGTCGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313639.8
ENST00000395095.7
ENST00000441788.7
ENST00000591290.5
ENST00000652521.1
CDS-3UTR CAA 90 bp AGCACCTCCTCCCTGGAACAGGGCCGTCCAGCTGGAGCGCAGGGACTTGCCTGGAGGCCGTCTTTGCCGTaGTCTGAGGTGGCGTCCTTG +
Preference number: 5 (lower is better)
Translates to: STSSLEQGRPAGAQGLAWRPSLP*SEVASL
Trigger: CAAGGACGCCACCTCAGACAACGGCAAAGACGGCCT...CCAGGCAAGTCCCTGCGCTCCAGCTGGACGGCCCTGTTCCAGGGAGGAGGTGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR CAA 90 bp CGCAAGTCTTGCGCAGGGAAGGAGGACGCTGGCCCTGTGAGGGCACGTGTTGGCATCTGCACGAAGCCCTaGTGTGTGCCCACCGCCACC +
Preference number: 5 (lower is better)
Translates to: RKSCAGKEDAGPVRARVGICTKP*CVPTAT
Trigger: GGTGGCGGTGGGCACACACAAGGGCTTCGTGCAGAT...GCCAACACGTGCCCTCACAGGGCCAGCGTCCTCCTTCCCTGCGCAAGACTTGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CAA 90 bp GACGGTCTGAGCCGGGACCGTCCAATGTGGTTCTCGCCCTTTGGGAAGGGAGACGAGTGCCCGGTCAGCTaGGCCACCTGGGTCAGGGAG +
Preference number: 5 (lower is better)
Translates to: DGLSRDRPMWFSPFGKGDECPVS*ATWVRE
Trigger: CTCCCTGACCCAGGTGGCCAAGCTGACCGGGCACTC...GTCTCCCTTCCCAAAGGGCGAGAACCACATTGGACGGTCCCGGCTCAGACCGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CAA 90 bp GAAGACGTGGCATCTGTTGTGCTCCTCTCCAGCCAGGGCAGTGAGCAGGTCCGGGAGTGCCCGGTCAGCTaGGCCACCTGGGTCAGGGAG +
Preference number: 5 (lower is better)
Translates to: EDVASVVLLSSQGSEQVRECPVS*ATWVRE
Trigger: CTCCCTGACCCAGGTGGCCAAGCTGACCGGGCACTC...CCGGACCTGCTCACTGCCCTGGCTGGAGAGGAGCACAACAGATGCCACGTCTTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CAA 90 bp CCAGCCACCCAGCAGGCATGGGGGACGCAAGTCTTGCGCAGGGAAGGAGGACGCGGCGCGTCCAGCACCTaGAAGGGGATCTTGGAGATC +
Preference number: 5 (lower is better)
Translates to: PATQQAWGTQVLRREGGRGASST*KGILEI
Trigger: GATCTCCAAGATCCCCTTCAAGGTGCTGGACGCGCC...GCGTCCTCCTTCCCTGCGCAAGACTTGCGTCCCCCATGCCTGCTGGGTGGCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CAA 90 bp CGGGGTCTCAGGCCCCCACCAATCAGCCCTGGCGTCTGGTGGTCTGTTCTGTGCCCCACGCTGAGCACATaGAGGGACGACCAGTCCACC +
Preference number: 5 (lower is better)
Translates to: RGLRPPPISPGVWWSVLCPTLST*RDDQST
Trigger: GGTGGACTGGTCGTCCCTCAATGTGCTCAGCGTGGG...GCACAGAACAGACCACCAGACGCCAGGGCTGATTGGTGGGGGCCTGAGACCCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CAA 90 bp GAGGAGCCTGGGAAGCTTCTCGAAGGATGGAGGGCGCCCACCTCCTGGACCCCTGGGCTGGTCTTGGGTTaGACATGGTGGGGTGCAGCC +
Preference number: 5 (lower is better)
Translates to: EEPGKLLEGWRAPTSWTPGLVLG*TWWGAA
Trigger: GGCTGCACCCCACCATGTCAAACCCAAGACCAGCCC...AGGGGTCCAGGAGGTGGGCGCCCTCCATCCTTCGAGAAGCTTCCCAGGCTCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CAA 90 bp GCCATGAATGGGCAACCGGGGTCTCAGGCCCCCACCAATCAGCCCTGGCGTCTGGGTGGGGACTGTCTCTaGGATCCACAGGCTGGCTCC +
Preference number: 5 (lower is better)
Translates to: AMNGQPGSQAPTNQPWRLGGDCL*DPQAGS
Trigger: GGAGCCAGCCTGTGGATCCAAGAGACAGTCCCCACC...CAGACGCCAGGGCTGATTGGTGGGGGCCTGAGACCCCGGTTGCCCATTCATGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CAA 90 bp CATGGGGGACGCAAGTCTTGCGCAGGGAAGGAGGACGCTGGCCCTGTGAGGGCAGGTGGGGACTGTCTCTaGGATCCACAGGCTGGCTCC +
Preference number: 5 (lower is better)
Translates to: HGGRKSCAGKEDAGPVRAGGDCL*DPQAGS
Trigger: GGAGCCAGCCTGTGGATCCAAGAGACAGTCCCCACC...TGCCCTCACAGGGCCAGCGTCCTCCTTCCCTGCGCAAGACTTGCGTCCCCCATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS TCA 90 bp TCCTGTGGAAGTTCACGCTCCAGTTGGCTCCGGCTCTGGAGGGGATaGAGCGGTCTCCGTGCTTGCTGGGCGAGGACACTGGGGAGCTGG +
Preference number: 5 (lower is better)
Translates to: SCGSSRSSWLRLWRG*SGLRACWARTLGSW
Trigger: CCAGCTCCCCAGTGTCCTCGCCCAGCAAGCACGGAGACCGCTTCATCCCCTCCAGAGCCGGAGCCAACTGGAGCGTGAACTTCCACAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313639.8
ENST00000395095.7
ENST00000441788.7
ENST00000588327.1
ENST00000591290.5
ENST00000652521.1
CDS GCA 90 bp AGCCGCGTCACCGTGAACAGACCCTTCTTCTCAGGCGTGGAGGGCTaGAGCCTGCGGTCCTCAGTCTGCGGGTCCTGCACCTTCTCGATG +
Preference number: 5 (lower is better)
Translates to: SRVTVNRPFFSGVEG*SLRSSVCGSCTFSM
Trigger: CATCGAGAAGGTGCAGGACCCGCAGACTGAGGACCGCAGGCTGCAGCCCTCCACGCCTGAGAAGAAGGGTCTGTTCACGGTGACGCGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313639.8
CDS GCA 90 bp TCCTGGGGGAGTCTCCGTCGGAAGTGCAGTGCTCAGTCCAGGCTGTaGAGAGGTGGTGCGTGCAGCCACAGAGGACGTCAGCTGTGGCCA +
Preference number: 5 (lower is better)
Translates to: SWGSLRRKCSAQSRL*RGGACSHRGRQLWP
Trigger: TGGCCACAGCTGACGTCCTCTGTGGCTGCACGCACCACCTCTGCACAGCCTGGACTGAGCACTGCACTTCCGACGGAGACTCCCCCAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652521.1
CDS-3UTR CAA 90 bp AACCTCAGGGTCTCGTCTCCAGCACCAGTGACGATGGCCTCCCCATCAGGGGACAAGCGGTCTCCGTGCTaGCTGGGCGAGGACACTGGG +
Preference number: 5 (lower is better)
Translates to: NLRVSSPAPVTMASPSGDKRSPC*LGEDTG
Trigger: CCCAGTGTCCTCGCCCAGCAAGCACGGAGACCGCTT...GTCCCCTGATGGGGAGGCCATCGTCACTGGTGCTGGAGACGAGACCCTGAGGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591290.5
CDS-3UTR CAA 90 bp TCAGGCCCCCACCAATCAGCCCTGGCGTCTGGTGGTCTGTTCTGTGCAGACGTGAAGCGGTCTCCGTGCTaGCTGGGCGAGGACACTGGG +
Preference number: 5 (lower is better)
Translates to: SGPHQSALASGGLFCADVKRSPC*LGEDTG
Trigger: CCCAGTGTCCTCGCCCAGCAAGCACGGAGACCGCTT...CACGTCTGCACAGAACAGACCACCAGACGCCAGGGCTGATTGGTGGGGGCCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CAA 90 bp AGGGGACATTGCCAGGTACAGCACGCGGTAGGAGTGCCCGGTCAGCTTGGCCACTGGTCTGTGGACCACTaGAGCCCGCACACCTCCTGC +
Preference number: 5 (lower is better)
Translates to: RGHCQVQHAVGVPGQLGHWSVDH*SPHTSC
Trigger: GCAGGAGGTGTGCGGGCTCAAGTGGTCCACAGACCA...GTGGCCAAGCTGACCGGGCACTCCTACCGCGTGCTGTACCTGGCAATGTCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591290.5
CDS-3UTR CAA 90 bp AGAGGAGCCTGGGAAGCTTCTCGAAGGATGGAGGGCGCCCACCTCCTGGACCCCTTGGACCAGGCCAGATaGCACACTTGGGAGCCCGTG +
Preference number: 5 (lower is better)
Translates to: RGAWEASRRMEGAHLLDPLDQAR*HTWEPV
Trigger: CACGGGCTCCCAAGTGTGCAATCTGGCCTGGTCCAA...GGGGTCCAGGAGGTGGGCGCCCTCCATCCTTCGAGAAGCTTCCCAGGCTCCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CAA 90 bp GAGTCCATGCAAGCTGAGGAGCTGGGGTCCTCCGACTCTGGACAGCTGGTGTGGGTGCTCACCAGCTCGTaGGCGTGCTTGGACCAGGCC +
Preference number: 5 (lower is better)
Translates to: ESMQAEELGSSDSGQLVWVLTSS*ACLDQA
Trigger: GGCCTGGTCCAAGCACGCCAACGAGCTGGTGAGCAC...CCACACCAGCTGTCCAGAGTCGGAGGACCCCAGCTCCTCAGCTTGCATGGACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CAA 90 bp TCCAGCACCAGTGACGATGGCCTCCCCATCAGGGGACATTGCCAGGTACAGCACGAGTGCCCGGTCAGCTaGGCCACCTGGGTCAGGGAG +
Preference number: 5 (lower is better)
Translates to: SSTSDDGLPIRGHCQVQHECPVS*ATWVRE
Trigger: CTCCCTGACCCAGGTGGCCAAGCTGACCGGGCACTC...GTGCTGTACCTGGCAATGTCCCCTGATGGGGAGGCCATCGTCACTGGTGCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591290.5
CDS-3UTR CAA 90 bp GACGTGGGCAGTTCCAGGAAGAGCATGCGGCTCCGGTGGGCAGGTGATGAACAGTGGGGGACGCAAGTCTaGCGCAGGGAAGGAGGACGC +
Preference number: 5 (lower is better)
Translates to: DVGSSRKSMRLRWAGDEQWGTQV*RREGGR
Trigger: GCGTCCTCCTTCCCTGCGCAAGACTTGCGTCCCCCA...CTGTTCATCACCTGCCCACCGGAGCCGCATGCTCTTCCTGGAACTGCCCACGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CAA 90 bp GACGTGGGCAGTTCCAGGAAGAGCATGCGGCTCCGGTGGGCAGGTGATGAACAGCACCTCCTGGACCCCTaGGGTCTCCTTGGCTTCCCC +
Preference number: 5 (lower is better)
Translates to: DVGSSRKSMRLRWAGDEQHLLDP*GLLGFP
Trigger: GGGGAAGCCAAGGAGACCCAAGGGGTCCAGGAGGTG...CTGTTCATCACCTGCCCACCGGAGCCGCATGCTCTTCCTGGAACTGCCCACGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CAA 90 bp GACGGTCTGAGCCGGGACCGTCCAATGTGGTTCTCGCCCTTTGGGAAGGGAGACGCATGGCTGTGCCCTTaGCCTCTCACCCAGGCGTCC +
Preference number: 5 (lower is better)
Translates to: DGLSRDRPMWFSPFGKGDAWLCP*PLTQAS
Trigger: GGACGCCTGGGTGAGAGGCAAAGGGCACAGCCATGC...GTCTCCCTTCCCAAAGGGCGAGAACCACATTGGACGGTCCCGGCTCAGACCGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR CAA 90 bp GAGTCCATGCAAGCTGAGGAGCTGGGGTCCTCCGACTCTGGACAGCTGGTGTGGCCTGCCCCAGGGCCTTaGCATGGCTGTGCCCTTTGC +
Preference number: 5 (lower is better)
Translates to: ESMQAEELGSSDSGQLVWPAPGP*HGCALC
Trigger: GCAAAGGGCACAGCCATGCAAAGGCCCTGGGGCAGG...CCACACCAGCTGTCCAGAGTCGGAGGACCCCAGCTCCTCAGCTTGCATGGACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS GCA 90 bp GGAGCTGGGGTCCTCCGACTCTGGACAGCTGGTGTGGCACGGTCCTaGCCGGCAGGTTTACCGGATCCTGGTGAAGAGGTTGAGCACAGA +
Preference number: 5 (lower is better)
Translates to: GAGVLRLWTAGVARS*PAGLPDPGEEVEHR
Trigger: TCTGTGCTCAACCTCTTCACCAGGATCCGGTAAACCTGCCGGGCAGGACCGTGCCACACCAGCTGTCCAGAGTCGGAGGACCCCAGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441788.7
ENST00000588084.1
ENST00000652521.1
CDS GCA 90 bp CGTCGGAAGTGCAGTGCTCAGTCCAGGCTGTGCAGAGGTGGTGCGTaGAGCCACAGAGGACGTCAGCTGTGGCCATGGTTGGGGAGGACA +
Preference number: 5 (lower is better)
Translates to: RRKCSAQSRLCRGGA*SHRGRQLWPWLGRT
Trigger: TGTCCTCCCCAACCATGGCCACAGCTGACGTCCTCTGTGGCTGCACGCACCACCTCTGCACAGCCTGGACTGAGCACTGCACTTCCGACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652521.1
CDS GCA 90 bp TCTCCGTCGGAAGTGCAGTGCTCAGTCCAGGCTGTGCAGAGGTGGTaGGTGCAGCCACAGAGGACGTCAGCTGTGGCCATGGTTGGGGAG +
Preference number: 5 (lower is better)
Translates to: SPSEVQCSVQAVQRW*VQPQRTSAVAMVGE
Trigger: CTCCCCAACCATGGCCACAGCTGACGTCCTCTGTGGCTGCACGCACCACCTCTGCACAGCCTGGACTGAGCACTGCACTTCCGACGGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652521.1
CDS CCA 90 bp ATGCAAGCTGAGGAGCTGGGGTCCTCCGACTCTGGACAGCTGGTGTaGCACGGTCCTGCCCGGCAGGTTTACCGGATCCTGGTGAAGAGG +
Preference number: 5 (lower is better)
Translates to: MQAEELGSSDSGQLV*HGPARQVYRILVKR
Trigger: CCTCTTCACCAGGATCCGGTAAACCTGCCGGGCAGGACCGTGCCACACCAGCTGTCCAGAGTCGGAGGACCCCAGCTCCTCAGCTTGCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441788.7
ENST00000588084.1
ENST00000652521.1
CDS CCA 90 bp GAGTCTCCGTCGGAAGTGCAGTGCTCAGTCCAGGCTGTGCAGAGGTaGTGCGTGCAGCCACAGAGGACGTCAGCTGTGGCCATGGTTGGG +
Preference number: 5 (lower is better)
Translates to: ESPSEVQCSVQAVQR*CVQPQRTSAVAMVG
Trigger: CCCAACCATGGCCACAGCTGACGTCCTCTGTGGCTGCACGCACCACCTCTGCACAGCCTGGACTGAGCACTGCACTTCCGACGGAGACTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652521.1
CDS-3UTR CAA 90 bp CCTTGGCTTCCCCACGGCTGTTGGCGCTGGTGGACAGGACAGGTGAAGACACAGAAGTTCACGCTCCAGTaGGCTCCGGCTCTGGAGGGG +
Preference number: 5 (lower is better)
Translates to: PWLPHGCWRWWTGQVKTQKFTLQ*APALEG
Trigger: CCCCTCCAGAGCCGGAGCCAACTGGAGCGTGAACTT...CTGTGTCTTCACCTGTCCTGTCCACCAGCGCCAACAGCCGTGGGGAAGCCAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CAA 90 bp ACCGGGGTCTCAGGCCCCCACCAATCAGCCCTGGCGTCTGGTGGTCTGTTCTGTAGGCCGTCTTTGCCGTaGTCTGAGGTGGCGTCCTTG +
Preference number: 5 (lower is better)
Translates to: TGVSGPHQSALASGGLFCRPSLP*SEVASL
Trigger: CAAGGACGCCACCTCAGACAACGGCAAAGACGGCCT...ACAGAACAGACCACCAGACGCCAGGGCTGATTGGTGGGGGCCTGAGACCCCGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CAA 90 bp CGCAAGTCTTGCGCAGGGAAGGAGGACGCTGGCCCTGTGAGGGCACGTGTTGGCGGCCAGATTGCACACTaGGGAGCCCGTGTCGATACA +
Preference number: 5 (lower is better)
Translates to: RKSCAGKEDAGPVRARVGGQIAH*GARVDT
Trigger: TGTATCGACACGGGCTCCCAAGTGTGCAATCTGGCC...GCCAACACGTGCCCTCACAGGGCCAGCGTCCTCCTTCCCTGCGCAAGACTTGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CAA 90 bp GGGACATTGCCAGGTACAGCACGCGGTAGGAGTGCCCGGTCAGCTTGGCCACCTTTGGACCAGGCCAGATaGCACACTTGGGAGCCCGTG +
Preference number: 5 (lower is better)
Translates to: GTLPGTARGRSARSAWPPLDQAR*HTWEPV
Trigger: CACGGGCTCCCAAGTGTGCAATCTGGCCTGGTCCAA...AGGTGGCCAAGCTGACCGGGCACTCCTACCGCGTGCTGTACCTGGCAATGTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591290.5
CDS-3UTR CAA 90 bp CCAGCACCAGTGACGATGGCCTCCCCATCAGGGGACATTGCCAGGTACAGCACGGGGATCTTGGAGATCTaGCGGGTGGGTTTCCGGGGG +
Preference number: 5 (lower is better)
Translates to: PAPVTMASPSGDIARYSTGILEI*RVGFRG
Trigger: CCCCCGGAAACCCACCCGCAAGATCTCCAAGATCCC...CGTGCTGTACCTGGCAATGTCCCCTGATGGGGAGGCCATCGTCACTGGTGCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000591290.5
CDS-3UTR CAA 90 bp GAGTCCATGCAAGCTGAGGAGCTGGGGTCCTCCGACTCTGGACAGCTGGTGTGGGGGATCTTGGAGATCTaGCGGGTGGGTTTCCGGGGG +
Preference number: 5 (lower is better)
Translates to: ESMQAEELGSSDSGQLVWGILEI*RVGFRG
Trigger: CCCCCGGAAACCCACCCGCAAGATCTCCAAGATCCC...CCACACCAGCTGTCCAGAGTCGGAGGACCCCAGCTCCTCAGCTTGCATGGACTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CAA 90 bp CCTCCTCCCTGGAACAGGGCCGTCCAGCTGGAGCGCAGGGACTTGCCTGGAGTCACCTTGAAGGGGATCTaGGAGATCTTGCGGGTGGGT +
Preference number: 5 (lower is better)
Translates to: PPPWNRAVQLERRDLPGVTLKGI*EILRVG
Trigger: ACCCACCCGCAAGATCTCCAAGATCCCCTTCAAGGT...GACTCCAGGCAAGTCCCTGCGCTCCAGCTGGACGGCCCTGTTCCAGGGAGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR CAA 90 bp CTGCTGAGGGTCCCCGACCACGTGCCCACCCCAGATACTGGTGGACATGGTTCAGGGCTGGTCTTGGGTTaGACATGGTGGGGTGCAGCC +
Preference number: 5 (lower is better)
Translates to: LLRVPDHVPTPDTGGHGSGLVLG*TWWGAA
Trigger: GGCTGCACCCCACCATGTCAAACCCAAGACCAGCCC...TGAACCATGTCCACCAGTATCTGGGGTGGGCACGTGGTCGGGGACCCTCAGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CAA 90 bp GCCTACATGCCTTGGTCTGGCCTTGGGGCTGGTCTTGGGTTTGACATGGTGGGGGCTTCCCCACGGCTGTaGGCGCTGGTGGACAGGACA +
Preference number: 5 (lower is better)
Translates to: AYMPWSGLGAGLGFDMVGASPRL*ALVDRT
Trigger: TGTCCTGTCCACCAGCGCCAACAGCCGTGGGGAAGC...CCCCACCATGTCAAACCCAAGACCAGCCCCAAGGCCAGACCAAGGCATGTAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CAA 90 bp GACGTGGGCAGTTCCAGGAAGAGCATGCGGCTCCGGTGGGCAGGTGATGAACAGCCTGGAGTCCAGTCCTaGGCCCTGCAGGATTGTGGC +
Preference number: 5 (lower is better)
Translates to: DVGSSRKSMRLRWAGDEQPGVQS*ALQDCG
Trigger: GCCACAATCCTGCAGGGCCAAGGACTGGACTCCAGG...CTGTTCATCACCTGCCCACCGGAGCCGCATGCTCTTCCTGGAACTGCCCACGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS TCA 90 bp GGCCTGCAGGGCGGATGGGCTGGGACCCTAACCTTTGCCGTTGTCTaGGGTGGCGTCCTTGGCTTTCCGGTTCTGACTGGGAGACTTCTC +
Preference number: 5 (lower is better)
Translates to: GLQGGWAGTLTFAVV*GGVLGFPVLTGRLL
Trigger: GAGAAGTCTCCCAGTCAGAACCGGAAAGCCAAGGACGCCACCTCAGACAACGGCAAAGGTTAGGGTCCCAGCCCATCCGCCCTGCAGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588327.1
CDS CCA 90 bp GAGGTGGTGCGTGCAGCCACAGAGGACGTCAGCTGTGGCCATGGTTaGGGAGGACAGCTGGAAACATCGGCTTCACAGGCAGCATTGCCC +
Preference number: 5 (lower is better)
Translates to: EVVRAATEDVSCGHG*GGQLETSASQAALP
Trigger: GGGCAATGCTGCCTGTGAAGCCGATGTTTCCAGCTGTCCTCCCCAACCATGGCCACAGCTGACGTCCTCTGTGGCTGCACGCACCACCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652521.1
CDS CCA 90 bp AGGCTGTGCAGAGGTGGTGCGTGCAGCCACAGAGGACGTCAGCTGTaGCCATGGTTGGGGAGGACAGCTGGAAACATCGGCTTCACAGGC +
Preference number: 5 (lower is better)
Translates to: RLCRGGACSHRGRQL*PWLGRTAGNIGFTG
Trigger: GCCTGTGAAGCCGATGTTTCCAGCTGTCCTCCCCAACCATGGCCACAGCTGACGTCCTCTGTGGCTGCACGCACCACCTCTGCACAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652521.1
CDS-3UTR CAA 90 bp ACATGCCTTGGTCTGGCCTTGGGGCTGGTCTTGGGTTTGACATGGTGGGGTGCAAAGCGGTCTCCGTGCTaGCTGGGCGAGGACACTGGG +
Preference number: 5 (lower is better)
Translates to: TCLGLALGLVLGLTWWGAKRSPC*LGEDTG
Trigger: CCCAGTGTCCTCGCCCAGCAAGCACGGAGACCGCTT...TGCACCCCACCATGTCAAACCCAAGACCAGCCCCAAGGCCAGACCAAGGCATGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CAA 90 bp TCTCCAGCACCAGTGACGATGGCCTCCCCATCAGGGGACATTGCCAGGTACAGCAAGTTCACGCTCCAGTaGGCTCCGGCTCTGGAGGGG +
Preference number: 5 (lower is better)
Translates to: SPAPVTMASPSGDIARYSKFTLQ*APALEG
Trigger: CCCCTCCAGAGCCGGAGCCAACTGGAGCGTGAACTT...GCTGTACCTGGCAATGTCCCCTGATGGGGAGGCCATCGTCACTGGTGCTGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591290.5
CDS-3UTR CAA 90 bp GTCTCCAGCACCAGTGACGATGGCCTCCCCATCAGGGGACATTGCCAGGTACAGATCTGCACGAAGCCCTaGTGTGTGCCCACCGCCACC +
Preference number: 5 (lower is better)
Translates to: VSSTSDDGLPIRGHCQVQICTKP*CVPTAT
Trigger: GGTGGCGGTGGGCACACACAAGGGCTTCGTGCAGAT...CTGTACCTGGCAATGTCCCCTGATGGGGAGGCCATCGTCACTGGTGCTGGAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591290.5
CDS-3UTR CAA 90 bp GACGGTCTGAGCCGGGACCGTCCAATGTGGTTCTCGCCCTTTGGGAAGGGAGACTTGGACCAGGCCAGATaGCACACTTGGGAGCCCGTG +
Preference number: 5 (lower is better)
Translates to: DGLSRDRPMWFSPFGKGDLDQAR*HTWEPV
Trigger: CACGGGCTCCCAAGTGTGCAATCTGGCCTGGTCCAA...GTCTCCCTTCCCAAAGGGCGAGAACCACATTGGACGGTCCCGGCTCAGACCGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CAA 90 bp CTGCTGAGGGTCCCCGACCACGTGCCCACCCCAGATACTGGTGGACATGGTTCAAGCTCGTTGGCGTGCTaGGACCAGGCCAGATTGCAC +
Preference number: 5 (lower is better)
Translates to: LLRVPDHVPTPDTGGHGSSSLAC*DQARLH
Trigger: GTGCAATCTGGCCTGGTCCAAGCACGCCAACGAGCT...TGAACCATGTCCACCAGTATCTGGGGTGGGCACGTGGTCGGGGACCCTCAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CAA 90 bp CCTTGGCTTCCCCACGGCTGTTGGCGCTGGTGGACAGGACAGGTGAAGACACAGAGCTCGTTGGCGTGCTaGGACCAGGCCAGATTGCAC +
Preference number: 5 (lower is better)
Translates to: PWLPHGCWRWWTGQVKTQSSLAC*DQARLH
Trigger: GTGCAATCTGGCCTGGTCCAAGCACGCCAACGAGCT...CTGTGTCTTCACCTGTCCTGTCCACCAGCGCCAACAGCCGTGGGGAAGCCAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CAA 90 bp GGGGTGATAAGTCCAGAGCAGACATCCTCCTCCAGTGTGAGGGTGACGCTTGGCGTGCTCACCAGCTCGTaGGCGTGCTTGGACCAGGCC +
Preference number: 5 (lower is better)
Translates to: GVISPEQTSSSSVRVTLGVLTSS*ACLDQA
Trigger: GGCCTGGTCCAAGCACGCCAACGAGCTGGTGAGCAC...GCCAAGCGTCACCCTCACACTGGAGGAGGATGTCTGCTCTGGACTTATCACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CAA 90 bp GCCTACATGCCTTGGTCTGGCCTTGGGGCTGGTCTTGGGTTTGACATGGTGGGGGGATCAACAGAAAAGTaGCAGCCCGCCCTGCGGGGC +
Preference number: 5 (lower is better)
Translates to: AYMPWSGLGAGLGFDMVGGSTEK*QPALRG
Trigger: GCCCCGCAGGGCGGGCTGCAACTTTTCTGTTGATCC...CCCCACCATGTCAAACCCAAGACCAGCCCCAAGGCCAGACCAAGGCATGTAGGC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR CAA 90 bp CGCTGGCCCTGTGAGGGCACGTGTTGGCGAATGCACGAAGACGTGGCATCTGTTCCGCTTCCCCTGCCCTaGTCAGGTCCCCACAGATAC +
Preference number: 5 (lower is better)
Translates to: RWPCEGTCWRMHEDVASVPLPLP*SGPHRY
Trigger: GTATCTGTGGGGACCTGACAAGGGCAGGGGAAGCGG...AACAGATGCCACGTCTTCGTGCATTCGCCAACACGTGCCCTCACAGGGCCAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR CAA 90 bp GGCAACCGGGGTCTCAGGCCCCCACCAATCAGCCCTGGCGTCTGGTGGTCTGTTTGCCCAGACAGTAGCTaGTACCCCTTGGCACACCAA +
Preference number: 5 (lower is better)
Translates to: GNRGLRPPPISPGVWWSVCPDSS*YPLAHQ
Trigger: TTGGTGTGCCAAGGGGTACAAGCTACTGTCTGGGCA...AACAGACCACCAGACGCCAGGGCTGATTGGTGGGGGCCTGAGACCCCGGTTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000652521.1
CDS GCA 90 bp CGTGCGTGCTCACCAGCTCGTTGGCGTGCTTGGACCAGGCCAGATTaGACACTTGGGAGCCCGTGTCGATACACTGCAGTGGTTGTCCTG +
Preference number: 5 (lower is better)
Translates to: RACSPARWRAWTRPD*TLGSPCRYTAVVVL
Trigger: CAGGACAACCACTGCAGTGTATCGACACGGGCTCCCAAGTGTGCAATCTGGCCTGGTCCAAGCACGCCAACGAGCTGGTGAGCACGCACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313639.8
ENST00000395095.7
ENST00000441788.7
ENST00000586212.1
ENST00000652521.1
CDS-3UTR CAA 90 bp ACATGCCTTGGTCTGGCCTTGGGGCTGGTCTTGGGTTTGACATGGTGGGGTGCATGGTCTGTGGACCACTaGAGCCCGCACACCTCCTGC +
Preference number: 5 (lower is better)
Translates to: TCLGLALGLVLGLTWWGAWSVDH*SPHTSC
Trigger: GCAGGAGGTGTGCGGGCTCAAGTGGTCCACAGACCA...TGCACCCCACCATGTCAAACCCAAGACCAGCCCCAAGGCCAGACCAAGGCATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CAA 90 bp CGGGGTCTCAGGCCCCCACCAATCAGCCCTGGCGTCTGGTGGTCTGTTCTGTGCGATACACTGCAGTGGTaGTCCTGTCAGCGTGTTCCA +
Preference number: 5 (lower is better)
Translates to: RGLRPPPISPGVWWSVLCDTLQW*SCQRVP
Trigger: TGGAACACGCTGACAGGACAACCACTGCAGTGTATC...GCACAGAACAGACCACCAGACGCCAGGGCTGATTGGTGGGGGCCTGAGACCCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CAA 90 bp ATGCAAGCTGAGGAGCTGGGGTCCTCCGACTCTGGACAGCTGGTGTGGCACGGTGGCCAGATTGCACACTaGGGAGCCCGTGTCGATACA +
Preference number: 5 (lower is better)
Translates to: MQAEELGSSDSGQLVWHGGQIAH*GARVDT
Trigger: TGTATCGACACGGGCTCCCAAGTGTGCAATCTGGCC...ACCGTGCCACACCAGCTGTCCAGAGTCGGAGGACCCCAGCTCCTCAGCTTGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CAA 90 bp GAGTCCATGCAAGCTGAGGAGCTGGGGTCCTCCGACTCTGGACAGCTGGTGTGGAGCAGCTTCTGGCTCTaGTTGCTGACGGGAGACAGG +
Preference number: 5 (lower is better)
Translates to: ESMQAEELGSSDSGQLVWSSFWL*LLTGDR
Trigger: CCTGTCTCCCGTCAGCAACAAGAGCCAGAAGCTGCT...CCACACCAGCTGTCCAGAGTCGGAGGACCCCAGCTCCTCAGCTTGCATGGACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CAA 90 bp TGCAAGCTGAGGAGCTGGGGTCCTCCGACTCTGGACAGCTGGTGTGGCACGGTCACCTTGAAGGGGATCTaGGAGATCTTGCGGGTGGGT +
Preference number: 5 (lower is better)
Translates to: CKLRSWGPPTLDSWCGTVTLKGI*EILRVG
Trigger: ACCCACCCGCAAGATCTCCAAGATCCCCTTCAAGGT...GACCGTGCCACACCAGCTGTCCAGAGTCGGAGGACCCCAGCTCCTCAGCTTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CAA 90 bp GCCTACATGCCTTGGTCTGGCCTTGGGGCTGGTCTTGGGTTTGACATGGTGGGGGGCGCGTCCAGCACCTaGAAGGGGATCTTGGAGATC +
Preference number: 5 (lower is better)
Translates to: AYMPWSGLGAGLGFDMVGGASST*KGILEI
Trigger: GATCTCCAAGATCCCCTTCAAGGTGCTGGACGCGCC...CCCCACCATGTCAAACCCAAGACCAGCCCCAAGGCCAGACCAAGGCATGTAGGC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CAA 90 bp CGCCCCACCCAGACAGAGGTGGGGAGAGTCTCTCCAGTGAATGTGGAAGATCGACCCACGCTGAGCACATaGAGGGACGACCAGTCCACC +
Preference number: 5 (lower is better)
Translates to: RPTQTEVGRVSPVNVEDRPTLST*RDDQST
Trigger: GGTGGACTGGTCGTCCCTCAATGTGCTCAGCGTGGG...TCGATCTTCCACATTCACTGGAGAGACTCTCCCCACCTCTGTCTGGGTGGGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441788.7
CDS-3UTR CAA 90 bp GGGTCAGGGAGGGGTACTTCCAGACAAGGATCTGGTTCTGTGAGTAGCCGTGCGCCCACGCTGAGCACATaGAGGGACGACCAGTCCACC +
Preference number: 5 (lower is better)
Translates to: GSGRGTSRQGSGSVSSRAPTLST*RDDQST
Trigger: GGTGGACTGGTCGTCCCTCAATGTGCTCAGCGTGGG...CGCACGGCTACTCACAGAACCAGATCCTTGTCTGGAAGTACCCCTCCCTGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591290.5
CDS-3UTR CAA 90 bp GAGGGTCCCCGACCACGTGCCCACCCCAGATACTGGTGGACATGGTTCACAATCGCCTTGGGGCTGGTCTaGGGTTTGACATGGTGGGGT +
Preference number: 5 (lower is better)
Translates to: EGPRPRAHPRYWWTWFTIALGLV*GLTWWG
Trigger: ACCCCACCATGTCAAACCCAAGACCAGCCCCAAGGC...GATTGTGAACCATGTCCACCAGTATCTGGGGTGGGCACGTGGTCGGGGACCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CAA 90 bp CTGCTGAGGGTCCCCGACCACGTGCCCACCCCAGATACTGGTGGACATGGTTCAAAGACGTGGCATCTGTaGTGCTCCTCTCCAGCCAGG +
Preference number: 5 (lower is better)
Translates to: LLRVPDHVPTPDTGGHGSKTWHL*CSSPAR
Trigger: CCTGGCTGGAGAGGAGCACAACAGATGCCACGTCTT...TGAACCATGTCCACCAGTATCTGGGGTGGGCACGTGGTCGGGGACCCTCAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS TCA 90 bp ATGGCAGTTTGTCCAGAATCCCGGGGCACCTTGAAGTGCCTGGCGTaGACTCACCAGGTACAGCACGCGGTAGGAGTGCCCGGTCAGCTT +
Preference number: 5 (lower is better)
Translates to: MAVCPESRGTLKCLA*THQVQHAVGVPGQL
Trigger: AAGCTGACCGGGCACTCCTACCGCGTGCTGTACCTGGTGAGTTCACGCCAGGCACTTCAAGGTGCCCCGGGATTCTGGACAAACTGCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586212.1
CDS TCA 90 bp ATGAAAGGAGCAAGGCTCTACCCAGGCCACAGCGCGGACACGCCCTaGGGACGTTGCACCAGAAAGGAAACCGCGGAGCAGAGACCACTT +
Preference number: 5 (lower is better)
Translates to: MKGARLYPGHSADTP*GRCTRKETAEQRPL
Trigger: AAGTGGTCTCTGCTCCGCGGTTTCCTTTCTGGTGCAACGTCCTCAGGGCGTGTCCGCGCTGTGGCCTGGGTAGAGCCTTGCTCCTTTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652521.1
CDS GCA 90 bp CTAAGGGAATACGTGAACAGACCCTTCTTCTCAGGCGTGGAGGGCTaGAGCCTGCGGTCCTCAGTCTGCGGGTCCTGCACCTTCTCGATG +
Preference number: 5 (lower is better)
Translates to: LREYVNRPFFSGVEG*SLRSSVCGSCTFSM
Trigger: CATCGAGAAGGTGCAGGACCCGCAGACTGAGGACCGCAGGCTGCAGCCCTCCACGCCTGAGAAGAAGGGTCTGTTCACGTATTCCCTTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000395095.7
ENST00000441788.7
ENST00000588327.1
ENST00000591290.5
ENST00000592214.1
ENST00000652521.1
CDS GCA 90 bp CGTGCGTGCTCACCAGCTCGTTGGCGTGCTTGGACCAGGCCAGATTaGACACTTGGGAGCCCGTGTCGATACACTGCAGTGGTTGTCCTT +
Preference number: 5 (lower is better)
Translates to: RACSPARWRAWTRPD*TLGSPCRYTAVVVL
Trigger: AAGGACAACCACTGCAGTGTATCGACACGGGCTCCCAAGTGTGCAATCTGGCCTGGTCCAAGCACGCCAACGAGCTGGTGAGCACGCACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591290.5
CDS CCA 90 bp CTCACCAGCTCGTTGGCGTGCTTGGACCAGGCCAGATTGCACACTTaGGAGCCCGTGTCGATACACTGCAGTGGTTGTCCTGTCAGCGTG +
Preference number: 5 (lower is better)
Translates to: LTSSLACLDQARLHT*EPVSIHCSGCPVSV
Trigger: CACGCTGACAGGACAACCACTGCAGTGTATCGACACGGGCTCCCAAGTGTGCAATCTGGCCTGGTCCAAGCACGCCAACGAGCTGGTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313639.8
ENST00000395095.7
ENST00000441788.7
ENST00000586212.1
ENST00000652521.1
CDS CCA 90 bp TGCAGAGGTGGTGCGTGCAGCCACAGAGGACGTCAGCTGTGGCCATaGTTGGGGAGGACAGCTGGAAACATCGGCTTCACAGGCAGCATT +
Preference number: 5 (lower is better)
Translates to: CRGGACSHRGRQLWP*LGRTAGNIGFTGSI
Trigger: AATGCTGCCTGTGAAGCCGATGTTTCCAGCTGTCCTCCCCAACCATGGCCACAGCTGACGTCCTCTGTGGCTGCACGCACCACCTCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652521.1
CDS-3UTR CAA 90 bp AGTGACGATGGCCTCCCCATCAGGGGACATTGCCAGGTACAGCACGCGGTAGGAGGCCAGATTGCACACTaGGGAGCCCGTGTCGATACA +
Preference number: 5 (lower is better)
Translates to: SDDGLPIRGHCQVQHAVGGQIAH*GARVDT
Trigger: TGTATCGACACGGGCTCCCAAGTGTGCAATCTGGCC...TCCTACCGCGTGCTGTACCTGGCAATGTCCCCTGATGGGGAGGCCATCGTCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591290.5
CDS-3UTR CAA 90 bp CGGTCAGCTTGGCCACCTGGGTCAGGGAGGGGTACTTCCAGACAAGGATCTGGTAGCAGCTTCTGGCTCTaGTTGCTGACGGGAGACAGG +
Preference number: 5 (lower is better)
Translates to: RSAWPPGSGRGTSRQGSGSSFWL*LLTGDR
Trigger: CCTGTCTCCCGTCAGCAACAAGAGCCAGAAGCTGCT...ACCAGATCCTTGTCTGGAAGTACCCCTCCCTGACCCAGGTGGCCAAGCTGACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591290.5
CDS CCA 90 bp CCAGGCCAGATTGCACACTTGGGAGCCCGTGTCGATACACTGCAGTaGTTGTCCTGTCAGCGTGTTCCAGAAGCGGATACAGCGGTCAGC +
Preference number: 5 (lower is better)
Translates to: PGQIAHLGARVDTLQ*LSCQRVPEADTAVS
Trigger: GCTGACCGCTGTATCCGCTTCTGGAACACGCTGACAGGACAACCACTGCAGTGTATCGACACGGGCTCCCAAGTGTGCAATCTGGCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313639.8
ENST00000395095.7
ENST00000441788.7
ENST00000586212.1
ENST00000652521.1
CDS CCA 90 bp GCAGGGCGGATGGGCTGGGACCCTAACCTTTGCCGTTGTCTGAGGTaGCGTCCTTGGCTTTCCGGTTCTGACTGGGAGACTTCTCATTCT +
Preference number: 5 (lower is better)
Translates to: AGRMGWDPNLCRCLR*RPWLSGSDWETSHS
Trigger: AGAATGAGAAGTCTCCCAGTCAGAACCGGAAAGCCAAGGACGCCACCTCAGACAACGGCAAAGGTTAGGGTCCCAGCCCATCCGCCCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588327.1
CDS CCA 90 bp CAGAGTAGGCCAGGCCGTCTTTGCCGTTGTCTGAGGTGGCGTCCTTaGCTTTCCGGTTCTGACTGGGAGACTTCTCATTCTCCTGCAGGC +
Preference number: 5 (lower is better)
Translates to: QSRPGRLCRCLRWRP*LSGSDWETSHSPAG
Trigger: GCCTGCAGGAGAATGAGAAGTCTCCCAGTCAGAACCGGAAAGCCAAGGACGCCACCTCAGACAACGGCAAAGACGGCCTGGCCTACTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592214.1
CDS CCA 90 bp CAGCCACAGAGGACGTCAGCTGTGGCCATGGTTGGGGAGGACAGCTaGAAACATCGGCTTCACAGGCAGCATTGCCCAGACAGTAGCTTG +
Preference number: 5 (lower is better)
Translates to: QPQRTSAVAMVGEDS*KHRLHRQHCPDSSL
Trigger: CAAGCTACTGTCTGGGCAATGCTGCCTGTGAAGCCGATGTTTCCAGCTGTCCTCCCCAACCATGGCCACAGCTGACGTCCTCTGTGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652521.1
CDS-3UTR CAA 90 bp GTCTCCAGCACCAGTGACGATGGCCTCCCCATCAGGGGACATTGCCAGGTACAGACCTTGAAGGGGATCTaGGAGATCTTGCGGGTGGGT +
Preference number: 5 (lower is better)
Translates to: VSSTSDDGLPIRGHCQVQTLKGI*EILRVG
Trigger: ACCCACCCGCAAGATCTCCAAGATCCCCTTCAAGGT...CTGTACCTGGCAATGTCCCCTGATGGGGAGGCCATCGTCACTGGTGCTGGAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000591290.5
CDS-3UTR CAA 90 bp GATGCTTCCAGAGAGACTGCTGCTTCGAGCAGTGACAGCAGAGGTGGCTGCAAGGCCTTGGGGCTGGTCTaGGGTTTGACATGGTGGGGT +
Preference number: 5 (lower is better)
Translates to: DASRETAASSSDSRGGCKALGLV*GLTWWG
Trigger: ACCCCACCATGTCAAACCCAAGACCAGCCCCAAGGC...CTTGCAGCCACCTCTGCTGTCACTGCTCGAAGCAGCAGTCTCTCTGGAAGCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CAA 90 bp GGGGTGATAAGTCCAGAGCAGACATCCTCCTCCAGTGTGAGGGTGACGCTTGGCAAGACGTGGCATCTGTaGTGCTCCTCTCCAGCCAGG +
Preference number: 5 (lower is better)
Translates to: GVISPEQTSSSSVRVTLGKTWHL*CSSPAR
Trigger: CCTGGCTGGAGAGGAGCACAACAGATGCCACGTCTT...GCCAAGCGTCACCCTCACACTGGAGGAGGATGTCTGCTCTGGACTTATCACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CAA 90 bp CCAGCACCAGTGACGATGGCCTCCCCATCAGGGGACATTGCCAGGTACAGCACGGATACACTGCAGTGGTaGTCCTTGTTGTCGTTGCCC +
Preference number: 5 (lower is better)
Translates to: PAPVTMASPSGDIARYSTDTLQW*SLLSLP
Trigger: GGGCAACGACAACAAGGACAACCACTGCAGTGTATC...CGTGCTGTACCTGGCAATGTCCCCTGATGGGGAGGCCATCGTCACTGGTGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591290.5
CDS GCA 90 bp TTGGACCAGGCCAGATTGCACACTTGGGAGCCCGTGTCGATACACTaGAGTGGTTGTCCTGTCAGCGTGTTCCAGAAGCGGATACAGCGG +
Preference number: 5 (lower is better)
Translates to: LDQARLHTWEPVSIH*SGCPVSVFQKRIQR
Trigger: CCGCTGTATCCGCTTCTGGAACACGCTGACAGGACAACCACTGCAGTGTATCGACACGGGCTCCCAAGTGTGCAATCTGGCCTGGTCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313639.8
ENST00000395095.7
ENST00000441788.7
ENST00000586212.1
ENST00000652521.1
CDS CCA 90 bp CTCACCAGCTCGTTGGCGTGCTTGGACCAGGCCAGATTGCACACTTaGGAGCCCGTGTCGATACACTGCAGTGGTTGTCCTTGTTGTCGT +
Preference number: 5 (lower is better)
Translates to: LTSSLACLDQARLHT*EPVSIHCSGCPCCR
Trigger: ACGACAACAAGGACAACCACTGCAGTGTATCGACACGGGCTCCCAAGTGTGCAATCTGGCCTGGTCCAAGCACGCCAACGAGCTGGTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591290.5
CDS-3UTR CAA 90 bp CTCCTGGACCCCTTGGGTCTCCTTGGCTTCCCCACGGCTGTTGGCGCTGGTGGATTTGTCGAACGGGTTTaGCTAAAGACGTTCCAGAAC +
Preference number: 5 (lower is better)
Translates to: LLDPLGLLGFPTAVGAGGFVERV*LKTFQN
Trigger: GTTCTGGAACGTCTTTAGCAAAACCCGTTCGACAAA...TCCACCAGCGCCAACAGCCGTGGGGAAGCCAAGGAGACCCAAGGGGTCCAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CAA 90 bp GTGAGCAGGTCCGGGTTCAGTTCTCCTGGGGTGATAAGTCCAGAGCAGACATCCCGGAGCAGAGACCACTaGCAAAGGCAGTACTGTGGC +
Preference number: 5 (lower is better)
Translates to: VSRSGFSSPGVISPEQTSRSRDH*QRQYCG
Trigger: GCCACAGTACTGCCTTTGCAAGTGGTCTCTGCTCCG...GGATGTCTGCTCTGGACTTATCACCCCAGGAGAACTGAACCCGGACCTGCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652521.1
CDS-3UTR CAA 90 bp GTGATAAGTCCAGAGCAGACATCCTCCTCCAGTGTGAGGGTGACGCTTGGCCAGGATACACTGCAGTGGTaGTCCTGTCAGCGTGTTCCA +
Preference number: 5 (lower is better)
Translates to: VISPEQTSSSSVRVTLGQDTLQW*SCQRVP
Trigger: TGGAACACGCTGACAGGACAACCACTGCAGTGTATC...CTGGCCAAGCGTCACCCTCACACTGGAGGAGGATGTCTGCTCTGGACTTATCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CAA 90 bp CAGCCTGGGAGCATGAGACAGAGAAGCAGAGGAGCCTGGGAAGCTTCTCGAAGGCAAGCGGCGAGGAACTaGTTCAAGTCCAGCAAATCT +
Preference number: 5 (lower is better)
Translates to: QPGSMRQRSRGAWEASRRQAARN*FKSSKS
Trigger: AGATTTGCTGGACTTGAACAAGTTCCTCGCCGCTTG...CCTTCGAGAAGCTTCCCAGGCTCCTCTGCTTCTCTGTCTCATGCTCCCAGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652521.1
CDS-3UTR CAA 90 bp GTGATAAGTCCAGAGCAGACATCCTCCTCCAGTGTGAGGGTGACGCTTGGCCAGAGTAGCTTGTACCCCTaGGCACACCAAAAACCAGGC +
Preference number: 5 (lower is better)
Translates to: VISPEQTSSSSVRVTLGQSSLYP*AHQKPG
Trigger: GCCTGGTTTTTGGTGTGCCAAGGGGTACAAGCTACT...CTGGCCAAGCGTCACCCTCACACTGGAGGAGGATGTCTGCTCTGGACTTATCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652521.1
CDS-3UTR CAA 90 bp CACAGACTCCTTTGTCGAACGGGTTTTGCTAAAGACGTTCCAGAACCTCAGGGTAGGCCGTCTTTGCCGTaGTCTGAGGTGGCGTCCTTG +
Preference number: 5 (lower is better)
Translates to: HRLLCRTGFAKDVPEPQGRPSLP*SEVASL
Trigger: CAAGGACGCCACCTCAGACAACGGCAAAGACGGCCT...ACCCTGAGGTTCTGGAACGTCTTTAGCAAAACCCGTTCGACAAAGGAGTCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591290.5
CDS-3UTR CAA 90 bp CACAGACTCCTTTGTCGAACGGGTTTTGCTAAAGACGTTCCAGAACCTCAGGGTAGCTCGTTGGCGTGCTaGGACCAGGCCAGATTGCAC +
Preference number: 5 (lower is better)
Translates to: HRLLCRTGFAKDVPEPQGSSLAC*DQARLH
Trigger: GTGCAATCTGGCCTGGTCCAAGCACGCCAACGAGCT...ACCCTGAGGTTCTGGAACGTCTTTAGCAAAACCCGTTCGACAAAGGAGTCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591290.5
CDS-3UTR CAA 90 bp CGCTGGCCCTGTGAGGGCACGTGTTGGCGAATGCACGAAGACGTGGCATCTGTTTTTGTCGAACGGGTTTaGCTAAAGACGTTCCAGAAC +
Preference number: 5 (lower is better)
Translates to: RWPCEGTCWRMHEDVASVFVERV*LKTFQN
Trigger: GTTCTGGAACGTCTTTAGCAAAACCCGTTCGACAAA...AACAGATGCCACGTCTTCGTGCATTCGCCAACACGTGCCCTCACAGGGCCAGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000652521.1
CDS-3UTR CAA 90 bp CGGTCAGCTTGGCCACCTGGGTCAGGGAGGGGTACTTCCAGACAAGGATCTGGTTTTGTCGAACGGGTTTaGCTAAAGACGTTCCAGAAC +
Preference number: 5 (lower is better)
Translates to: RSAWPPGSGRGTSRQGSGFVERV*LKTFQN
Trigger: GTTCTGGAACGTCTTTAGCAAAACCCGTTCGACAAA...ACCAGATCCTTGTCTGGAAGTACCCCTCCCTGACCCAGGTGGCCAAGCTGACCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591290.5
CDS-3UTR CAA 90 bp GACACAGACTCCTTTGTCGAACGGGTTTTGCTAAAGACGTTCCAGAACCTCAGGGGCGCGTCCAGCACCTaGAAGGGGATCTTGGAGATC +
Preference number: 5 (lower is better)
Translates to: DTDSFVERVLLKTFQNLRGASST*KGILEI
Trigger: GATCTCCAAGATCCCCTTCAAGGTGCTGGACGCGCC...CCTGAGGTTCTGGAACGTCTTTAGCAAAACCCGTTCGACAAAGGAGTCTGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000591290.5
CDS GCA 72 bp GACCACTTGAGCCCGCACACCTCCTGCCGGTGGCCCTaGAGCCGCCGCTCCGACTGCAGTGGCGGGGTGCGG +
Preference number: 6 (lower is better)
Translates to: DHLSPHTSCRWP*SRRSDCSGGVR
Trigger: CCGCACCCCGCCACTGCAGTCGGAGCGGCGGCTGCAGGGCCACCGGCAGGAGGTGTGCGGGCTCAAGTGGTC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313639.8
ENST00000395095.7
ENST00000441788.7
ENST00000591290.5
ENST00000652521.1
CDS GCA 72 bp GGCCCTGCAGCCGCCGCTCCGACTGCAGTGGCGGGGTaGGGATGTCCCTCTGCAGGATCATGCGGTCGCGGC +
Preference number: 6 (lower is better)
Translates to: GPAAAAPTAVAG*GCPSAGSCGRG
Trigger: GCCGCGACCGCATGATCCTGCAGAGGGACATCCGCACCCCGCCACTGCAGTCGGAGCGGCGGCTGCAGGGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313639.8
ENST00000395095.7
ENST00000441788.7
ENST00000591290.5
ENST00000652521.1
CDS CCA 72 bp ACCTTGCAGGGCAGCAGGGACTCTGGCTCGCTCCCGTaGCTCGCTGGCTCCCGCCGACCCCGCCTCTCCTGG +
Preference number: 6 (lower is better)
Translates to: TLQGSRDSGSLP*LAGSRRPRLSW
Trigger: CCAGGAGAGGCGGGGTCGGCGGGAGCCAGCGAGCCACGGGAGCGAGCCAGAGTCCCTGCTGCCCTGCAAGGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652521.1
CDS CCA 72 bp CTGCCGGTGGCCCTGCAGCCGCCGCTCCGACTGCAGTaGCGGGGTGCGGATGTCCCTCTGCAGGATCATGCG +
Preference number: 6 (lower is better)
Translates to: LPVALQPPLRLQ*RGADVPLQDHA
Trigger: CGCATGATCCTGCAGAGGGACATCCGCACCCCGCCACTGCAGTCGGAGCGGCGGCTGCAGGGCCACCGGCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313639.8
ENST00000395095.7
ENST00000441788.7
ENST00000591290.5
ENST00000652521.1
CDS CCA 72 bp TCTGTGGACCACTTGAGCCCGCACACCTCCTGCCGGTaGCCCTGCAGCCGCCGCTCCGACTGCAGTGGCGGG +
Preference number: 6 (lower is better)
Translates to: SVDHLSPHTSCR*PCSRRSDCSGG
Trigger: CCCGCCACTGCAGTCGGAGCGGCGGCTGCAGGGCCACCGGCAGGAGGTGTGCGGGCTCAAGTGGTCCACAGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313639.8
ENST00000395095.7
ENST00000441788.7
ENST00000591290.5
ENST00000652521.1
CDS CCA 72 bp CTGTGCCTAGGCCACCTTGCAGGGCAGCAGGGACTCTaGCTCGCTCCCGTGGCTCGCTGGCTCCCGCCGACC +
Preference number: 6 (lower is better)
Translates to: LCLGHLAGQQGL*LAPVARWLPPT
Trigger: GGTCGGCGGGAGCCAGCGAGCCACGGGAGCGAGCCAGAGTCCCTGCTGCCCTGCAAGGTGGCCTAGGCACAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652521.1
CDS GCA 72 bp TGCAGGATCATGCGGTCGCGGCTCCCGGACGACAGCTaGTCAGCATTCCAGGCCAGCGCCCCGACGCGTGCC +
Preference number: 6 (lower is better)
Translates to: CRIMRSRLPDDS*SAFQASAPTRA
Trigger: GGCACGCGTCGGGGCGCTGGCCTGGAATGCTGAGCAGCTGTCGTCCGGGAGCCGCGACCGCATGATCCTGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313639.8
ENST00000395095.7
ENST00000441788.7
ENST00000591290.5
ENST00000652521.1
CDS GCA 72 bp CGCTCCGACTGCAGTGGCGGGGTGCGGATGTCCCTCTaGAGGATCATGCGGTCGCGGCTCCCGGACGACAGC +
Preference number: 6 (lower is better)
Translates to: RSDCSGGVRMSL*RIMRSRLPDDS
Trigger: GCTGTCGTCCGGGAGCCGCGACCGCATGATCCTGCAGAGGGACATCCGCACCCCGCCACTGCAGTCGGAGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313639.8
ENST00000395095.7
ENST00000441788.7
ENST00000591290.5
ENST00000652521.1
CDS GCA 72 bp TCAGGCGTGGAGGGCTGCAGCCTGCGGTCCTCAGTCTaGGGGTCCTGCACCTTCTCGATGCCGGCACCCAGC +
Preference number: 6 (lower is better)
Translates to: SGVEGCSLRSSV*GSCTFSMPAPS
Trigger: GCTGGGTGCCGGCATCGAGAAGGTGCAGGACCCGCAGACTGAGGACCGCAGGCTGCAGCCCTCCACGCCTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313639.8
ENST00000395095.7
ENST00000441788.7
ENST00000588327.1
ENST00000591290.5
ENST00000592214.1
ENST00000652521.1
CDS GCA 72 bp TGTGGGGACCAGGCGATGGCCTTCACGGCCGCCAGGTaGTCCGTGTACTGCTGCACGGGGCTCAGGCTCGAG +
Preference number: 6 (lower is better)
Translates to: CGDQAMAFTAAR*SVYCCTGLRLE
Trigger: CTCGAGCCTGAGCCCCGTGCAGCAGTACACGGAGCACCTGGCGGCCGTGAAGGCCATCGCCTGGTCCCCACA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313639.8
ENST00000395095.7
ENST00000441788.7
ENST00000652521.1
CDS GCA 72 bp ATGCAGCCAGCAGGCGACTCACCACGTAGACGCGGCTaGCGCAGGGCAGAGACGATCCGGACTGCCAGGGGC +
Preference number: 6 (lower is better)
Translates to: MQPAGDSPRRRG*RRAETIRTARG
Trigger: GCCCCTGGCAGTCCGGATCGTCTCTGCCCTGCGGCAGCCGCGTCTACGTGGTGAGTCGCCTGCTGGCTGCAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652521.1
CDS CCA 72 bp TCTGGCGAAGCAGGCGCCGCTCATAGTCCTGGTCCATaGCGAGGCAGGGCTCGGCCCGCGGCAAGGTTAGCC +
Preference number: 6 (lower is better)
Translates to: SGEAGAAHSPGP*RGRARPAARLA
Trigger: GGCTAACCTTGCCGCGGGCCGAGCCCTGCCTCGCCATGGACCAGGACTATGAGCGGCGCCTGCTTCGCCAGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441788.7
ENST00000588327.1
CDS CCA 72 bp GCCACCACCGTCGGCTCCATGCAGGTCGCCCAGCACTaGCGGCTTCACAAGCCCCATGCAGCCAGCAGGCGA +
Preference number: 6 (lower is better)
Translates to: ATTVGSMQVAQH*RLHKPHAASRR
Trigger: TCGCCTGCTGGCTGCATGGGGCTTGTGAAGCCGCCAGTGCTGGGCGACCTGCATGGAGCCGACGGTGGTGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652521.1
CDS CCA 72 bp TCTGGCGAAGCAGGCGCCGCTCATAGTCCTGGTCCATaGCGAGGCAGGGCTCGGCCCGCGGCAAGGTTAGCG +
Preference number: 6 (lower is better)
Translates to: SGEAGAAHSPGP*RGRARPAARLA
Trigger: CGCTAACCTTGCCGCGGGCCGAGCCCTGCCTCGCCATGGACCAGGACTATGAGCGGCGCCTGCTTCGCCAGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652521.1
CDS GCA 72 bp CGGCTGCGTCCCAGATCTGCACGAAGCCCTTGTGTGTaGCCACCGCCACCAGGTTCCCCCGCTCAGACCAGC +
Preference number: 6 (lower is better)
Translates to: RLRPRSARSPCV*PPPPGSPAQTS
Trigger: GCTGGTCTGAGCGGGGGAACCTGGTGGCGGTGGGCACACACAAGGGCTTCGTGCAGATCTGGGACGCAGCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313639.8
ENST00000395095.7
ENST00000441788.7
ENST00000591290.5
ENST00000652521.1
CDS GCA 72 bp GCAGTGGCGGGGTGCGGATGTCCCTCTGCAGGATCATaGGGTCGCGGCTCCCGGACGACAGCTGCTCAGCAT +
Preference number: 6 (lower is better)
Translates to: AVAGCGCPSAGS*GRGSRTTAAQH
Trigger: ATGCTGAGCAGCTGTCGTCCGGGAGCCGCGACCGCATGATCCTGCAGAGGGACATCCGCACCCCGCCACTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313639.8
ENST00000395095.7
ENST00000441788.7
ENST00000591290.5
ENST00000652521.1
CDS GCA 72 bp GCCCATTCCAACGCTGGCAACACAACCAGCACCAGATaGCCTGCCGGCCCCTGCTGCTGGGTCCCACGGGGT +
Preference number: 6 (lower is better)
Translates to: AHSNAGNTTSTR*PAGPCCWVPRG
Trigger: ACCCCGTGGGACCCAGCAGCAGGGGCCGGCAGGGCATCTGGTGCTGGTTGTGTTGCCAGCGTTGGAATGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586212.1
CDS GCA 72 bp GCAGGTCGCCCAGCACTGGCGGCTTCACAAGCCCCATaGAGCCAGCAGGCGACTCACCACGTAGACGCGGCT +
Preference number: 6 (lower is better)
Translates to: AGRPALAASQAP*SQQATHHVDAA
Trigger: AGCCGCGTCTACGTGGTGAGTCGCCTGCTGGCTGCATGGGGCTTGTGAAGCCGCCAGTGCTGGGCGACCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652521.1
CDS CCA 72 bp GATGAAGCGGTCTCCGTGCTTGCTGGGCGAGGACACTaGGGAGCTGGCAGGCGTCAGGGTCCGCCGCATCTC +
Preference number: 6 (lower is better)
Translates to: DEAVSVLAGRGH*GAGRRQGPPHL
Trigger: GAGATGCGGCGGACCCTGACGCCTGCCAGCTCCCCAGTGTCCTCGCCCAGCAAGCACGGAGACCGCTTCATC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313639.8
ENST00000395095.7
ENST00000441788.7
ENST00000588327.1
ENST00000591290.5
ENST00000652521.1
CDS CCA 72 bp CCAGCGCCCCGACGCGTGCCGTGTGGCCCTCCAACATaGACAGCTTCTTCCCTGCGGCTGCGTCCCAGATCT +
Preference number: 6 (lower is better)
Translates to: PAPRRVPCGPPT*TASSLRLRPRS
Trigger: AGATCTGGGACGCAGCCGCAGGGAAGAAGCTGTCCATGTTGGAGGGCCACACGGCACGCGTCGGGGCGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313639.8
ENST00000395095.7
ENST00000441788.7
ENST00000591290.5
ENST00000652521.1
CDS CCA 72 bp AGGCCAGCAGCCCGTGCTGATGTGGGGACCAGGCGATaGCCTTCACGGCCGCCAGGTGCTCCGTGTACTGCT +
Preference number: 6 (lower is better)
Translates to: RPAARADVGTRR*PSRPPGAPCTA
Trigger: AGCAGTACACGGAGCACCTGGCGGCCGTGAAGGCCATCGCCTGGTCCCCACATCAGCACGGGCTGCTGGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313639.8
ENST00000395095.7
ENST00000441788.7
ENST00000652521.1
CDS CCA 72 bp GGCAAGGCAGGGTGGGGGCCTGCAGGGCGGATGGGCTaGGACCCTAACCTTTGCCGTTGTCTGAGGTGGCGT +
Preference number: 6 (lower is better)
Translates to: GKAGWGPAGRMG*DPNLCRCLRWR
Trigger: ACGCCACCTCAGACAACGGCAAAGGTTAGGGTCCCAGCCCATCCGCCCTGCAGGCCCCCACCCTGCCTTGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588327.1
CDS CAA 90 bp GACAGCTTCTTCCCTGCGGCTGCGTCCCAGATCTGCACGAAGCCCTaGTGTGTGCCCACCGCCACCAGGTTCCCCCGCTCAGACCAGCCC +
Preference number: 6 (lower is better)
Translates to: DSFFPAAASQICTKP*CVPTATRFPRSDQP
Trigger: GGGCTGGTCTGAGCGGGGGAACCTGGTGGCGGTGGGCACACACAAGGGCTTCGTGCAGATCTGGGACGCAGCCGCAGGGAAGAAGCTGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313639.8
ENST00000395095.7
ENST00000441788.7
ENST00000591290.5
ENST00000652521.1
CDS GCA 72 bp GAGGGCTGCAGCCTGCGGTCCTCAGTCTGCGGGTCCTaGACCTTCTCGATGCCGGCACCCAGCAGCTCATTC +
Preference number: 6 (lower is better)
Translates to: EGCSLRSSVCGS*TFSMPAPSSSF
Trigger: GAATGAGCTGCTGGGTGCCGGCATCGAGAAGGTGCAGGACCCGCAGACTGAGGACCGCAGGCTGCAGCCCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313639.8
ENST00000395095.7
ENST00000441788.7
ENST00000588327.1
ENST00000591290.5
ENST00000592214.1
ENST00000652521.1
CDS GCA 72 bp CTCCTTGGGGTAGATCAGCCACCACCGTCGGCTCCATaGAGGTCGCCCAGCACTGGCGGCTTCACAAGCCCC +
Preference number: 6 (lower is better)
Translates to: LLGVDQPPPSAP*RSPSTGGFTSP
Trigger: GGGGCTTGTGAAGCCGCCAGTGCTGGGCGACCTGCATGGAGCCGACGGTGGTGGCTGATCTACCCCAAGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652521.1
CDS GCA 72 bp CAGGGGCTCCTGGGGGAGTCTCCGTCGGAAGTGCAGTaGTCAGTCCAGGCTGTGCAGAGGTGGTGCGTGCAG +
Preference number: 6 (lower is better)
Translates to: QGLLGESPSEVQ*SVQAVQRWCVQ
Trigger: CTGCACGCACCACCTCTGCACAGCCTGGACTGAGCACTGCACTTCCGACGGAGACTCCCCCAGGAGCCCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652521.1
CDS CCA 72 bp TCAGCATTCCAGGCCAGCGCCCCGACGCGTGCCGTGTaGCCCTCCAACATGGACAGCTTCTTCCCTGCGGCT +
Preference number: 6 (lower is better)
Translates to: SAFQASAPTRAV*PSNMDSFFPAA
Trigger: AGCCGCAGGGAAGAAGCTGTCCATGTTGGAGGGCCACACGGCACGCGTCGGGGCGCTGGCCTGGAATGCTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313639.8
ENST00000395095.7
ENST00000441788.7
ENST00000591290.5
ENST00000652521.1
CDS CCA 72 bp GAGGAGCTGGGGTCCTCCGACTCTGGACAGCTGGTGTaGCACGGTCCTGCCCGGCAGGTTTACCGGATCCTG +
Preference number: 6 (lower is better)
Translates to: EELGSSDSGQLV*HGPARQVYRIL
Trigger: CAGGATCCGGTAAACCTGCCGGGCAGGACCGTGCCACACCAGCTGTCCAGAGTCGGAGGACCCCAGCTCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441788.7
ENST00000588084.1
ENST00000652521.1
CDS CAA 72 bp TTCCCTGCGGCTGCGTCCCAGATCTGCACGAAGCCCTaGTGTGTGCCCACCGCCACCAGGTTCCCCCGCTCA +
Preference number: 6 (lower is better)
Translates to: FPAAASQICTKP*CVPTATRFPRS
Trigger: TGAGCGGGGGAACCTGGTGGCGGTGGGCACACACAAGGGCTTCGTGCAGATCTGGGACGCAGCCGCAGGGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313639.8
ENST00000395095.7
ENST00000441788.7
ENST00000591290.5
ENST00000652521.1
CDS TCA 72 bp GCACCTTCTCGATGCCGGCACCCAGCAGCTCATTCTTaGGCAGGGCAGAGTAGGCCAGGCCGTCTGCGGGCA +
Preference number: 6 (lower is better)
Translates to: APSRCRHPAAHS*AGQSRPGRLRA
Trigger: TGCCCGCAGACGGCCTGGCCTACTCTGCCCTGCTCAAGAATGAGCTGCTGGGTGCCGGCATCGAGAAGGTGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588327.1
CDS TCA 72 bp GCAAGGCTCTACCCAGGCCACAGCGCGGACACGCCCTaGGGACGTTGCACCAGAAAGGAAACCGCGGAGCAG +
Preference number: 6 (lower is better)
Translates to: ARLYPGHSADTP*GRCTRKETAEQ
Trigger: CTGCTCCGCGGTTTCCTTTCTGGTGCAACGTCCTCAGGGCGTGTCCGCGCTGTGGCCTGGGTAGAGCCTTGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652521.1
CDS GCA 72 bp ACCGTGAACAGACCCTTCTTCTCAGGCGTGGAGGGCTaGAGCCTGCGGTCCTCAGTCTGCGGGTCCTGCACC +
Preference number: 6 (lower is better)
Translates to: TVNRPFFSGVEG*SLRSSVCGSCT
Trigger: GGTGCAGGACCCGCAGACTGAGGACCGCAGGCTGCAGCCCTCCACGCCTGAGAAGAAGGGTCTGTTCACGGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313639.8
CDS CCA 72 bp AAGCTGAGGAGCTGGGGTCCTCCGACTCTGGACAGCTaGTGTGGCACGGTCCTGCCCGGCAGGTTTACCGGA +
Preference number: 6 (lower is better)
Translates to: KLRSWGPPTLDS*CGTVLPGRFTG
Trigger: TCCGGTAAACCTGCCGGGCAGGACCGTGCCACACCAGCTGTCCAGAGTCGGAGGACCCCAGCTCCTCAGCTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441788.7
ENST00000588084.1
ENST00000652521.1
CDS TCA 72 bp AGTTCACGCTCCAGTTGGCTCCGGCTCTGGAGGGGATaGAGCGGTCTCCGTGCTTGCTGGGCGAGGACACTG +
Preference number: 6 (lower is better)
Translates to: SSRSSWLRLWRG*SGLRACWARTL
Trigger: CAGTGTCCTCGCCCAGCAAGCACGGAGACCGCTTCATCCCCTCCAGAGCCGGAGCCAACTGGAGCGTGAACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313639.8
ENST00000395095.7
ENST00000441788.7
ENST00000588327.1
ENST00000591290.5
ENST00000652521.1
CDS GCA 72 bp ATGGACAGCTTCTTCCCTGCGGCTGCGTCCCAGATCTaGACGAAGCCCTTGTGTGTGCCCACCGCCACCAGG +
Preference number: 6 (lower is better)
Translates to: MDSFFPAAASQI*TKPLCVPTATR
Trigger: CCTGGTGGCGGTGGGCACACACAAGGGCTTCGTGCAGATCTGGGACGCAGCCGCAGGGAAGAAGCTGTCCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313639.8
ENST00000395095.7
ENST00000441788.7
ENST00000591290.5
ENST00000652521.1
CDS GCA 72 bp TACGTGAACAGACCCTTCTTCTCAGGCGTGGAGGGCTaGAGCCTGCGGTCCTCAGTCTGCGGGTCCTGCACC +
Preference number: 6 (lower is better)
Translates to: YVNRPFFSGVEG*SLRSSVCGSCT
Trigger: GGTGCAGGACCCGCAGACTGAGGACCGCAGGCTGCAGCCCTCCACGCCTGAGAAGAAGGGTCTGTTCACGTA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000395095.7
ENST00000441788.7
ENST00000588327.1
ENST00000591290.5
ENST00000592214.1
ENST00000652521.1
CDS CCA 72 bp ATTGCCTGTGGACAGGAGGGAAGCACCCCATGTCTCTaGGCCTCTAGGTGCCTCGGGACAGTGCTGGGGGAC +
Preference number: 6 (lower is better)
Translates to: IACGQEGSTPCL*ASRCLGTVLGD
Trigger: GTCCCCCAGCACTGTCCCGAGGCACCTAGAGGCCCAGAGACATGGGGTGCTTCCCTCCTGTCCACAGGCAAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588084.1
CDS CCA 72 bp TCGGAAGTGCAGTGCTCAGTCCAGGCTGTGCAGAGGTaGTGCGTGCAGCCACAGAGGACGTCAGCTGTGGCC +
Preference number: 6 (lower is better)
Translates to: SEVQCSVQAVQR*CVQPQRTSAVA
Trigger: GGCCACAGCTGACGTCCTCTGTGGCTGCACGCACCACCTCTGCACAGCCTGGACTGAGCACTGCACTTCCGA
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652521.1
CDS CAA 72 bp CTACCCAGGCCACAGCGCGGACACGCCCTGAGGACGTaGCACCAGAAAGGAAACCGCGGAGCAGAGACCACT +
Preference number: 6 (lower is better)
Translates to: LPRPQRGHALRT*HQKGNRGAETT
Trigger: AGTGGTCTCTGCTCCGCGGTTTCCTTTCTGGTGCAACGTCCTCAGGGCGTGTCCGCGCTGTGGCCTGGGTAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652521.1
CDS CAA 90 bp AGCAAGGCTCTACCCAGGCCACAGCGCGGACACGCCCTGAGGACGTaGCACCAGAAAGGAAACCGCGGAGCAGAGACCACTTGCAAAGGC +
Preference number: 6 (lower is better)
Translates to: SKALPRPQRGHALRT*HQKGNRGAETTCKG
Trigger: GCCTTTGCAAGTGGTCTCTGCTCCGCGGTTTCCTTTCTGGTGCAACGTCCTCAGGGCGTGTCCGCGCTGTGGCCTGGGTAGAGCCTTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652521.1
CDS TCA 72 bp GGCGGATGGGCTGGGACCCTAACCTTTGCCGTTGTCTaGGGTGGCGTCCTTGGCTTTCCGGTTCTGACTGGG +
Preference number: 6 (lower is better)
Translates to: GGWAGTLTFAVV*GGVLGFPVLTG
Trigger: CCCAGTCAGAACCGGAAAGCCAAGGACGCCACCTCAGACAACGGCAAAGGTTAGGGTCCCAGCCCATCCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588327.1
CDS GCA 72 bp GTGGCCCTCCAACATGGACAGCTTCTTCCCTGCGGCTaGGTCCCAGATCTGCACGAAGCCCTTGTGTGTGCC +
Preference number: 6 (lower is better)
Translates to: VALQHGQLLPCG*VPDLHEALVCA
Trigger: GGCACACACAAGGGCTTCGTGCAGATCTGGGACGCAGCCGCAGGGAAGAAGCTGTCCATGTTGGAGGGCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313639.8
ENST00000395095.7
ENST00000441788.7
ENST00000591290.5
ENST00000652521.1
CDS GCA 72 bp TGCCGTGTGGCCCTCCAACATGGACAGCTTCTTCCCTaGGGCTGCGTCCCAGATCTGCACGAAGCCCTTGTG +
Preference number: 6 (lower is better)
Translates to: CRVALQHGQLLP*GCVPDLHEALV
Trigger: CACAAGGGCTTCGTGCAGATCTGGGACGCAGCCGCAGGGAAGAAGCTGTCCATGTTGGAGGGCCACACGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313639.8
ENST00000395095.7
ENST00000441788.7
ENST00000591290.5
ENST00000652521.1
CDS GCA 72 bp GTCCTCCGACTCTGGACAGCTGGTGTGGCACGGTCCTaGCCGGCAGGTTTACCGGATCCTGGTGAAGAGGTT +
Preference number: 6 (lower is better)
Translates to: VLRLWTAGVARS*PAGLPDPGEEV
Trigger: AACCTCTTCACCAGGATCCGGTAAACCTGCCGGGCAGGACCGTGCCACACCAGCTGTCCAGAGTCGGAGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441788.7
ENST00000588084.1
ENST00000652521.1
CDS GCA 72 bp TGCAGTGCTCAGTCCAGGCTGTGCAGAGGTGGTGCGTaGAGCCACAGAGGACGTCAGCTGTGGCCATGGTTG +
Preference number: 6 (lower is better)
Translates to: CSAQSRLCRGGA*SHRGRQLWPWL
Trigger: CAACCATGGCCACAGCTGACGTCCTCTGTGGCTGCACGCACCACCTCTGCACAGCCTGGACTGAGCACTGCA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652521.1
CDS GCA 72 bp GAAGTGCAGTGCTCAGTCCAGGCTGTGCAGAGGTGGTaGGTGCAGCCACAGAGGACGTCAGCTGTGGCCATG +
Preference number: 6 (lower is better)
Translates to: EVQCSVQAVQRW*VQPQRTSAVAM
Trigger: CATGGCCACAGCTGACGTCCTCTGTGGCTGCACGCACCACCTCTGCACAGCCTGGACTGAGCACTGCACTTC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652521.1
CDS CCA 72 bp AGTAGCCGTGCGTGCTCACCAGCTCGTTGGCGTGCTTaGACCAGGCCAGATTGCACACTTGGGAGCCCGTGT +
Preference number: 6 (lower is better)
Translates to: SSRACSPARWRA*TRPDCTLGSPC
Trigger: ACACGGGCTCCCAAGTGTGCAATCTGGCCTGGTCCAAGCACGCCAACGAGCTGGTGAGCACGCACGGCTACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313639.8
ENST00000395095.7
ENST00000441788.7
ENST00000586212.1
ENST00000591290.5
ENST00000652521.1
CDS CCA 72 bp AGAGGTGGTGCGTGCAGCCACAGAGGACGTCAGCTGTaGCCATGGTTGGGGAGGACAGCTGGAAACATCGGC +
Preference number: 6 (lower is better)
Translates to: RGGACSHRGRQL*PWLGRTAGNIG
Trigger: GCCGATGTTTCCAGCTGTCCTCCCCAACCATGGCCACAGCTGACGTCCTCTGTGGCTGCACGCACCACCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652521.1
CDS CAA 72 bp GCGTGCAGCCACAGAGGACGTCAGCTGTGGCCATGGTaGGGGAGGACAGCTGGAAACATCGGCTTCACAGGC +
Preference number: 6 (lower is better)
Translates to: ACSHRGRQLWPW*GRTAGNIGFTG
Trigger: GCCTGTGAAGCCGATGTTTCCAGCTGTCCTCCCCAACCATGGCCACAGCTGACGTCCTCTGTGGCTGCACGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652521.1
CDS CAA 90 bp CCGTGCGTGCTCACCAGCTCGTTGGCGTGCTTGGACCAGGCCAGATaGCACACTTGGGAGCCCGTGTCGATACACTGCAGTGGTTGTCCT +
Preference number: 6 (lower is better)
Translates to: PCVLTSSLACLDQAR*HTWEPVSIHCSGCP
Trigger: AGGACAACCACTGCAGTGTATCGACACGGGCTCCCAAGTGTGCAATCTGGCCTGGTCCAAGCACGCCAACGAGCTGGTGAGCACGCACGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313639.8
ENST00000395095.7
ENST00000441788.7
ENST00000586212.1
ENST00000591290.5
ENST00000652521.1
CDS CAA 90 bp AGAGGTGGTGCGTGCAGCCACAGAGGACGTCAGCTGTGGCCATGGTaGGGGAGGACAGCTGGAAACATCGGCTTCACAGGCAGCATTGCC +
Preference number: 6 (lower is better)
Translates to: RGGACSHRGRQLWPW*GRTAGNIGFTGSIA
Trigger: GGCAATGCTGCCTGTGAAGCCGATGTTTCCAGCTGTCCTCCCCAACCATGGCCACAGCTGACGTCCTCTGTGGCTGCACGCACCACCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652521.1
CDS TCA 72 bp AGAAGTCGTCCTGCAGCTCGGGCGCGTCCAGCACCTTaGAGGGGATCTTGGAGATCTTGCGGGTGGGTTTCC +
Preference number: 6 (lower is better)
Translates to: RSRPAARARPAP*RGSWRSCGWVS
Trigger: GGAAACCCACCCGCAAGATCTCCAAGATCCCCTTCAAGGTGCTGGACGCGCCCGAGCTGCAGGACGACTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395095.7
ENST00000441788.7
ENST00000591290.5
ENST00000592214.1
ENST00000652521.1
CDS TCA 72 bp CGTTCCAGAACCTCAGGGTCTCGTCTCCAGCACCAGTaGCGATGGCCTCCCCATCAGGGGACATTGCCTGTG +
Preference number: 6 (lower is better)
Translates to: RSRTSGSRLQHQ*RWPPHQGTLPV
Trigger: CACAGGCAATGTCCCCTGATGGGGAGGCCATCGTCACTGGTGCTGGAGACGAGACCCTGAGGTTCTGGAACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588084.1
CDS CCA 72 bp CGTGCAGCCACAGAGGACGTCAGCTGTGGCCATGGTTaGGGAGGACAGCTGGAAACATCGGCTTCACAGGCA +
Preference number: 6 (lower is better)
Translates to: RAATEDVSCGHG*GGQLETSASQA
Trigger: TGCCTGTGAAGCCGATGTTTCCAGCTGTCCTCCCCAACCATGGCCACAGCTGACGTCCTCTGTGGCTGCACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652521.1
CDS CCA 72 bp GGTGCGTGCAGCCACAGAGGACGTCAGCTGTGGCCATaGTTGGGGAGGACAGCTGGAAACATCGGCTTCACA +
Preference number: 6 (lower is better)
Translates to: GACSHRGRQLWP*LGRTAGNIGFT
Trigger: TGTGAAGCCGATGTTTCCAGCTGTCCTCCCCAACCATGGCCACAGCTGACGTCCTCTGTGGCTGCACGCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652521.1
CDS CAA 90 bp GCTCACCAGCTCGTTGGCGTGCTTGGACCAGGCCAGATTGCACACTaGGGAGCCCGTGTCGATACACTGCAGTGGTTGTCCTGTCAGCGT +
Preference number: 6 (lower is better)
Translates to: AHQLVGVLGPGQIAH*GARVDTLQWLSCQR
Trigger: ACGCTGACAGGACAACCACTGCAGTGTATCGACACGGGCTCCCAAGTGTGCAATCTGGCCTGGTCCAAGCACGCCAACGAGCTGGTGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313639.8
ENST00000395095.7
ENST00000441788.7
ENST00000586212.1
ENST00000652521.1
CDS CAA 90 bp CCCCTGCTCAGACTCCAAGAGTCCCAGAGCCAAGCGGCGAGGAACTaGTTCAAGTCCAGCAAATCTGAGACCAGAGGGAGGCCAGCCCTC +
Preference number: 6 (lower is better)
Translates to: PLLRLQESQSQAARN*FKSSKSETRGRPAL
Trigger: GAGGGCTGGCCTCCCTCTGGTCTCAGATTTGCTGGACTTGAACAAGTTCCTCGCCGCTTGGCTCTGGGACTCTTGGAGTCTGAGCAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652521.1
CDS TCA 72 bp TGGCCATGGCAGTTTGTCCAGAATCCCGGGGCACCTTaGAGTGCCTGGCGTGAACTCACCAGGTACAGCACG +
Preference number: 6 (lower is better)
Translates to: WPWQFVQNPGAP*SAWRELTRYST
Trigger: CGTGCTGTACCTGGTGAGTTCACGCCAGGCACTTCAAGGTGCCCCGGGATTCTGGACAAACTGCCATGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586212.1
CDS GCA 72 bp TCACCAGCTCGTTGGCGTGCTTGGACCAGGCCAGATTaGACACTTGGGAGCCCGTGTCGATACACTGCAGTG +
Preference number: 6 (lower is better)
Translates to: SPARWRAWTRPD*TLGSPCRYTAV
Trigger: CACTGCAGTGTATCGACACGGGCTCCCAAGTGTGCAATCTGGCCTGGTCCAAGCACGCCAACGAGCTGGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313639.8
ENST00000395095.7
ENST00000441788.7
ENST00000586212.1
ENST00000591290.5
ENST00000652521.1
CDS CCA 72 bp CAGAGTAGGCCAGGCCGTCTTTGCCGTTGTCTGAGGTaGCGTCCTTGGCTTTCCGGTTCTGACTGGGAGACT +
Preference number: 6 (lower is better)
Translates to: QSRPGRLCRCLR*RPWLSGSDWET
Trigger: AGTCTCCCAGTCAGAACCGGAAAGCCAAGGACGCCACCTCAGACAACGGCAAAGACGGCCTGGCCTACTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313639.8
ENST00000395095.7
ENST00000441788.7
ENST00000591290.5
ENST00000592214.1
ENST00000652521.1
CDS CCA 72 bp ACACCATCCTCCCTAAGAACACAGGACAGGGTGCTCTaGGGTGGCCATGGCAGTTTGTCCAGAATCCCGGGG +
Preference number: 6 (lower is better)
Translates to: TPSSLRTQDRVL*GGHGSLSRIPG
Trigger: CCCCGGGATTCTGGACAAACTGCCATGGCCACCCCAGAGCACCCTGTCCTGTGTTCTTAGGGAGGATGGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586212.1
CDS CCA 72 bp AGGACGTCAGCTGTGGCCATGGTTGGGGAGGACAGCTaGAAACATCGGCTTCACAGGCAGCATTGCCCAGAC +
Preference number: 6 (lower is better)
Translates to: RTSAVAMVGEDS*KHRLHRQHCPD
Trigger: GTCTGGGCAATGCTGCCTGTGAAGCCGATGTTTCCAGCTGTCCTCCCCAACCATGGCCACAGCTGACGTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652521.1
CDS CAA 72 bp CTCGTTGGCGTGCTTGGACCAGGCCAGATTGCACACTaGGGAGCCCGTGTCGATACACTGCAGTGGTTGTCC +
Preference number: 6 (lower is better)
Translates to: LVGVLGPGQIAH*GARVDTLQWLS
Trigger: GGACAACCACTGCAGTGTATCGACACGGGCTCCCAAGTGTGCAATCTGGCCTGGTCCAAGCACGCCAACGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313639.8
ENST00000395095.7
ENST00000441788.7
ENST00000586212.1
ENST00000591290.5
ENST00000652521.1
CDS CAA 72 bp CTCACCAGCTCGTTGGCGTGCTTGGACCAGGCCAGATaGCACACTTGGGAGCCCGTGTCGATACACTGCAGT +
Preference number: 6 (lower is better)
Translates to: LTSSLACLDQAR*HTWEPVSIHCS
Trigger: ACTGCAGTGTATCGACACGGGCTCCCAAGTGTGCAATCTGGCCTGGTCCAAGCACGCCAACGAGCTGGTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313639.8
ENST00000395095.7
ENST00000441788.7
ENST00000586212.1
ENST00000591290.5
ENST00000652521.1
CDS CAA 90 bp GCTCACCAGCTCGTTGGCGTGCTTGGACCAGGCCAGATTGCACACTaGGGAGCCCGTGTCGATACACTGCAGTGGTTGTCCTTGTTGTCG +
Preference number: 6 (lower is better)
Translates to: AHQLVGVLGPGQIAH*GARVDTLQWLSLLS
Trigger: CGACAACAAGGACAACCACTGCAGTGTATCGACACGGGCTCCCAAGTGTGCAATCTGGCCTGGTCCAAGCACGCCAACGAGCTGGTGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591290.5
CDS CAA 90 bp TCCCTAAGAACACAGGACAGGGTGCTCTGGGGTGGCCATGGCAGTTaGTCCAGAATCCCGGGGCACCTTGAAGTGCCTGGCGTGAACTCA +
Preference number: 6 (lower is better)
Translates to: SLRTQDRVLWGGHGS*SRIPGHLEVPGVNS
Trigger: TGAGTTCACGCCAGGCACTTCAAGGTGCCCCGGGATTCTGGACAAACTGCCATGGCCACCCCAGAGCACCCTGTCCTGTGTTCTTAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586212.1
CDS CAA 90 bp GGCCAGATTGCACACTTGGGAGCCCGTGTCGATACACTGCAGTGGTaGTCCTGTCAGCGTGTTCCAGAAGCGGATACAGCGGTCAGCTGT +
Preference number: 6 (lower is better)
Translates to: GQIAHLGARVDTLQW*SCQRVPEADTAVSC
Trigger: ACAGCTGACCGCTGTATCCGCTTCTGGAACACGCTGACAGGACAACCACTGCAGTGTATCGACACGGGCTCCCAAGTGTGCAATCTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313639.8
ENST00000395095.7
ENST00000441788.7
ENST00000586212.1
ENST00000652521.1
CDS GCA 72 bp GCCAGATTGCACACTTGGGAGCCCGTGTCGATACACTaGAGTGGTTGTCCTGTCAGCGTGTTCCAGAAGCGG +
Preference number: 6 (lower is better)
Translates to: ARLHTWEPVSIH*SGCPVSVFQKR
Trigger: CCGCTTCTGGAACACGCTGACAGGACAACCACTGCAGTGTATCGACACGGGCTCCCAAGTGTGCAATCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313639.8
ENST00000395095.7
ENST00000441788.7
ENST00000586212.1
ENST00000652521.1
CDS CCA 72 bp TCGTTGGCGTGCTTGGACCAGGCCAGATTGCACACTTaGGAGCCCGTGTCGATACACTGCAGTGGTTGTCCT +
Preference number: 6 (lower is better)
Translates to: SLACLDQARLHT*EPVSIHCSGCP
Trigger: AGGACAACCACTGCAGTGTATCGACACGGGCTCCCAAGTGTGCAATCTGGCCTGGTCCAAGCACGCCAACGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313639.8
ENST00000395095.7
ENST00000441788.7
ENST00000586212.1
ENST00000591290.5
ENST00000652521.1
CDS CCA 72 bp ATGGGCTGGGACCCTAACCTTTGCCGTTGTCTGAGGTaGCGTCCTTGGCTTTCCGGTTCTGACTGGGAGACT +
Preference number: 6 (lower is better)
Translates to: MGWDPNLCRCLR*RPWLSGSDWET
Trigger: AGTCTCCCAGTCAGAACCGGAAAGCCAAGGACGCCACCTCAGACAACGGCAAAGGTTAGGGTCCCAGCCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588327.1
CDS CAA 72 bp GCACACTTGGGAGCCCGTGTCGATACACTGCAGTGGTaGTCCTGTCAGCGTGTTCCAGAAGCGGATACAGCG +
Preference number: 6 (lower is better)
Translates to: AHLGARVDTLQW*SCQRVPEADTA
Trigger: CGCTGTATCCGCTTCTGGAACACGCTGACAGGACAACCACTGCAGTGTATCGACACGGGCTCCCAAGTGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313639.8
ENST00000395095.7
ENST00000441788.7
ENST00000586212.1
ENST00000652521.1
CDS CCA 72 bp CCAGGCCGTCTTTGCCGTTGTCTGAGGTGGCGTCCTTaGCTTTCCGGTTCTGACTGGGAGACTTCTCATTCT +
Preference number: 6 (lower is better)
Translates to: PGRLCRCLRWRP*LSGSDWETSHS
Trigger: AGAATGAGAAGTCTCCCAGTCAGAACCGGAAAGCCAAGGACGCCACCTCAGACAACGGCAAAGACGGCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313639.8
ENST00000395095.7
ENST00000441788.7
ENST00000591290.5
ENST00000592214.1
ENST00000652521.1
CDS CAA 72 bp CACAGGCAGCATTGCCCAGACAGTAGCTTGTACCCCTaGGCACACCAAAAACCAGGCAGGACCCGAACACTG +
Preference number: 6 (lower is better)
Translates to: HRQHCPDSSLYP*AHQKPGRTRTL
Trigger: CAGTGTTCGGGTCCTGCCTGGTTTTTGGTGTGCCAAGGGGTACAAGCTACTGTCTGGGCAATGCTGCCTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652521.1
CDS CAA 72 bp CATCGGCTTCACAGGCAGCATTGCCCAGACAGTAGCTaGTACCCCTTGGCACACCAAAAACCAGGCAGGACC +
Preference number: 6 (lower is better)
Translates to: HRLHRQHCPDSS*YPLAHQKPGRT
Trigger: GGTCCTGCCTGGTTTTTGGTGTGCCAAGGGGTACAAGCTACTGTCTGGGCAATGCTGCCTGTGAAGCCGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652521.1
CDS CAA 90 bp CATCGGCTTCACAGGCAGCATTGCCCAGACAGTAGCTTGTACCCCTaGGCACACCAAAAACCAGGCAGGACCCGAACACTGAGCTTCAGA +
Preference number: 6 (lower is better)
Translates to: HRLHRQHCPDSSLYP*AHQKPGRTRTLSFR
Trigger: TCTGAAGCTCAGTGTTCGGGTCCTGCCTGGTTTTTGGTGTGCCAAGGGGTACAAGCTACTGTCTGGGCAATGCTGCCTGTGAAGCCGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652521.1
CDS CAA 90 bp AGCTGGAAACATCGGCTTCACAGGCAGCATTGCCCAGACAGTAGCTaGTACCCCTTGGCACACCAAAAACCAGGCAGGACCCGAACACTG +
Preference number: 6 (lower is better)
Translates to: SWKHRLHRQHCPDSS*YPLAHQKPGRTRTL
Trigger: CAGTGTTCGGGTCCTGCCTGGTTTTTGGTGTGCCAAGGGGTACAAGCTACTGTCTGGGCAATGCTGCCTGTGAAGCCGATGTTTCCAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652521.1
CDS GCA 72 bp GAGGACAGCTGGAAACATCGGCTTCACAGGCAGCATTaGCCAGACAGTAGCTTGTACCCCTTGGCACACCAA +
Preference number: 6 (lower is better)
Translates to: EDSWKHRLHRQH*PDSSLYPLAHQ
Trigger: TTGGTGTGCCAAGGGGTACAAGCTACTGTCTGGGCAATGCTGCCTGTGAAGCCGATGTTTCCAGCTGTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652521.1
CDS CAA 72 bp AGACTCCAAGAGTCCCAGAGCCAAGCGGCGAGGAACTaGTTCAAGTCCAGCAAATCTGAGACCAGAGGGAGG +
Preference number: 6 (lower is better)
Translates to: RLQESQSQAARN*FKSSKSETRGR
Trigger: CCTCCCTCTGGTCTCAGATTTGCTGGACTTGAACAAGTTCCTCGCCGCTTGGCTCTGGGACTCTTGGAGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652521.1
CDS CAA 72 bp GTTGCACCAGAAAGGAAACCGCGGAGCAGAGACCACTaGCAAAGGCAGTACTGTGGCATGAAAACCCCACCC +
Preference number: 6 (lower is better)
Translates to: VAPERKPRSRDH*QRQYCGMKTPP
Trigger: GGGTGGGGTTTTCATGCCACAGTACTGCCTTTGCAAGTGGTCTCTGCTCCGCGGTTTCCTTTCTGGTGCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652521.1
CDS CCA 72 bp ATTGCACACTTGGGAGCCCGTGTCGATACACTGCAGTaGTTGTCCTGTCAGCGTGTTCCAGAAGCGGATACA +
Preference number: 6 (lower is better)
Translates to: IAHLGARVDTLQ*LSCQRVPEADT
Trigger: TGTATCCGCTTCTGGAACACGCTGACAGGACAACCACTGCAGTGTATCGACACGGGCTCCCAAGTGTGCAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313639.8
ENST00000395095.7
ENST00000441788.7
ENST00000586212.1
ENST00000652521.1
CDS CCA 72 bp GACCCTAACCTTTGCCGTTGTCTGAGGTGGCGTCCTTaGCTTTCCGGTTCTGACTGGGAGACTTCTCATTCT +
Preference number: 6 (lower is better)
Translates to: DPNLCRCLRWRP*LSGSDWETSHS
Trigger: AGAATGAGAAGTCTCCCAGTCAGAACCGGAAAGCCAAGGACGCCACCTCAGACAACGGCAAAGGTTAGGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588327.1
CDS CAA 90 bp TTGAGCACAGACACAGACTCCCACTTTACCTTTGTCGAACGGGTTTaGCTAAAGACGTTCCAGAACCTCAGGGTCTCGTCTCCAGCACCA +
Preference number: 6 (lower is better)
Translates to: LSTDTDSHFTFVERV*LKTFQNLRVSSPAP
Trigger: TGGTGCTGGAGACGAGACCCTGAGGTTCTGGAACGTCTTTAGCAAAACCCGTTCGACAAAGGTAAAGTGGGAGTCTGTGTCTGTGCTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395095.7
CDS CCA 72 bp ACGTTCACAGGGTCATCTGAGTGGTCAGCTGTGAGTTaGTTTTGGCTTTCCTCTTCACCCCTCTTTATGGGG +
Preference number: 6 (lower is better)
Translates to: TFTGSSEWSAVS*FWLSSSPLFMG
Trigger: CCCCATAAAGAGGGGTGAAGAGGAAAGCCAAAACCAACTCACAGCTGACCACTCAGATGACCCTGTGAACGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586212.1
CDS TCA 72 bp GTAGGACGTTCACAGGGTCATCTGAGTGGTCAGCTGTaGGTTGGTTTTGGCTTTCCTCTTCACCCCTCTTTA +
Preference number: 6 (lower is better)
Translates to: VGRSQGHLSGQL*VGFGFPLHPSL
Trigger: TAAAGAGGGGTGAAGAGGAAAGCCAAAACCAACTCACAGCTGACCACTCAGATGACCCTGTGAACGTCCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586212.1
CDS CAA 72 bp GACACAGACTCCCACTTTACCTTTGTCGAACGGGTTTaGCTAAAGACGTTCCAGAACCTCAGGGTCTCGTCT +
Preference number: 6 (lower is better)
Translates to: DTDSHFTFVERV*LKTFQNLRVSS
Trigger: AGACGAGACCCTGAGGTTCTGGAACGTCTTTAGCAAAACCCGTTCGACAAAGGTAAAGTGGGAGTCTGTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395095.7