RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FZD6 (Homo sapiens)

Ensembl gene IDs: ENSG00000164930

Ensembl transcript IDs: ENST00000358755.5, ENST00000519011.5, ENST00000521195.1, ENST00000522484.5, ENST00000522566.5, ENST00000523739.5, ENST00000523933.5

Found 623 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CACTGCCTGCCTGGCCCTTCCCGTCGACCTGTTCCCCAGAGAGTCTaGAGATGGATGCTGCTGGCGAGGCAGGTTCACCACAGTCCTGTT +
Preference number: 1 (lower is better)
Translates to: HCLPGPSRRPVPQRV*RWMLLARQVHHSPV
Trigger: AACAGGACTGTGGTGAACCTGCCTCGCCAGCAGCATCCATCTCCAGACTCTCTGGGGAACAGGTCGACGGGAAGGGCCAGGCAGGCAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
3UTR CCA 90 bp CTGCCTGGCCCTTCCCGTCGACCTGTTCCCCAGAGAGTCTGGAGATaGATGCTGCTGGCGAGGCAGGTTCACCACAGTCCTGTTCTCTTA +
Preference number: 1 (lower is better)
Translates to: LPGPSRRPVPQRVWR*MLLARQVHHSPVLL
Trigger: TAAGAGAACAGGACTGTGGTGAACCTGCCTCGCCAGCAGCATCCATCTCCAGACTCTCTGGGGAACAGGTCGACGGGAAGGGCCAGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
3UTR GCA 90 bp TGGACTAATCCTTCCTTCACTCCGCGCACTTTCAGATACACTGCCTaGCTGGCCCTTCCCGTCGACCTGTTCCCCAGAGAGTCTGGAGAT +
Preference number: 1 (lower is better)
Translates to: WTNPSFTPRTFRYTA*LALPVDLFPRESGD
Trigger: ATCTCCAGACTCTCTGGGGAACAGGTCGACGGGAAGGGCCAGGCAGGCAGTGTATCTGAAAGTGCGCGGAGTGAAGGAAGGATTAGTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
3UTR CCA 90 bp CTAATCCTTCCTTCACTCCGCGCACTTTCAGATACACTGCCTGCCTaGCCCTTCCCGTCGACCTGTTCCCCAGAGAGTCTGGAGATGGAT +
Preference number: 1 (lower is better)
Translates to: LILPSLRALSDTLPA*PFPSTCSPESLEMD
Trigger: ATCCATCTCCAGACTCTCTGGGGAACAGGTCGACGGGAAGGGCCAGGCAGGCAGTGTATCTGAAAGTGCGCGGAGTGAAGGAAGGATTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
3UTR TCA 90 bp CGGGTGAACAAGCAGAGATGTGGAACCTTTGAGGCTGCTTGGTTCTaGAGAACTGGGGACCTGCAAATTGTTGCTCTGTGCCAGGCCAGT +
Preference number: 1 (lower is better)
Translates to: RVNKQRCGTFEAAWF*RTGDLQIVALCQAS
Trigger: ACTGGCCTGGCACAGAGCAACAATTTGCAGGTCCCCAGTTCTTCAGAACCAAGCAGCCTCAAAGGTTCCACATCTCTGCTTGTTCACCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
3UTR TCA 90 bp TTCTCACTCCTGAAACCGGGTGAACAAGCAGAGATGTGGAACCTTTaGGGCTGCTTGGTTCTGAAGAACTGGGGACCTGCAAATTGTTGC +
Preference number: 1 (lower is better)
Translates to: FSLLKPGEQAEMWNL*GCLVLKNWGPANCC
Trigger: GCAACAATTTGCAGGTCCCCAGTTCTTCAGAACCAAGCAGCCTCAAAGGTTCCACATCTCTGCTTGTTCACCCGGTTTCAGGAGTGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
3UTR TCA 90 bp AGAAGCATAACAGTCAGGAAACCTGGTGTTCCCCATGCAACAGCATaGAACCACACTGCTTTTTGCTCGATGGCTTCACAACTCCATTTT +
Preference number: 1 (lower is better)
Translates to: RSITVRKPGVPHATA*NHTAFCSMASQLHF
Trigger: AAAATGGAGTTGTGAAGCCATCGAGCAAAAAGCAGTGTGGTTTCATGCTGTTGCATGGGGAACACCAGGTTTCCTGACTGTTATGCTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521195.1
3UTR CCA 90 bp TCCTTCAACTTTGTTCATAGCAAGAAGCATAACAGTCAGGAAACCTaGTGTTCCCCATGCAACAGCATGAAACCACACTGCTTTTTGCTC +
Preference number: 1 (lower is better)
Translates to: SFNFVHSKKHNSQET*CSPCNSMKPHCFLL
Trigger: GAGCAAAAAGCAGTGTGGTTTCATGCTGTTGCATGGGGAACACCAGGTTTCCTGACTGTTATGCTTCTTGCTATGAACAAAGTTGAAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000523933.5
3UTR TCA 90 bp GCAGGTTGGTACAAATGCTTTGCAGAGGAAAGTTTCAATGTTTGGTaGACATTCCAGATTTGCGAGAGGAAGAAAATGCTGTGCCAGCAT +
Preference number: 1 (lower is better)
Translates to: AGWYKCFAEESFNVW*TFQICERKKMLCQH
Trigger: ATGCTGGCACAGCATTTTCTTCCTCTCGCAAATCTGGAATGTTCACCAAACATTGAAACTTTCCTCTGCAAAGCATTTGTACCAACCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521195.1
3UTR TCA 90 bp TCCTGTGCTGGTTCCCATGGATTTGGAAATGACCTTCAGCTTGTGTaGACTTGGTTTATAGTGCTTCTTTTTGTGTTTAACTTTAGAATT +
Preference number: 1 (lower is better)
Translates to: SCAGSHGFGNDLQLV*TWFIVLLFVFNFRI
Trigger: AATTCTAAAGTTAAACACAAAAAGAAGCACTATAAACCAAGTTCACACAAGCTGAAGGTCATTTCCAAATCCATGGGAACCAGCACAGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000523933.5
3UTR-3UTR GCA 90 bp CCGTCGACCTGTTCCCCAGAGAGTCTGGAGATGGATGCTGCTGGCGAGGCAGGTGAGTCTGGAGATGGATaGTGCTGGCGAGGCAGGTTC +
Preference number: 2 (lower is better)
Translates to: PSTCSPESLEMDAAGEAGESGDG*CWRGRF
Trigger: GAACCTGCCTCGCCAGCAGCATCCATCTCCAGACTC...ACCTGCCTCGCCAGCAGCATCCATCTCCAGACTCTCTGGGGAACAGGTCGACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
3UTR-3UTR CCA 90 bp CCGTCGACCTGTTCCCCAGAGAGTCTGGAGATGGATGCTGCTGGCGAGGCAGGTGTTCCCCAGAGAGTCTaGAGATGGATGCTGCTGGCG +
Preference number: 2 (lower is better)
Translates to: PSTCSPESLEMDAAGEAGVPQRV*RWMLLA
Trigger: CGCCAGCAGCATCCATCTCCAGACTCTCTGGGGAAC...ACCTGCCTCGCCAGCAGCATCCATCTCCAGACTCTCTGGGGAACAGGTCGACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
3UTR-3UTR CCA 90 bp ATGCTGCTGGCGAGGCAGGTTCACCACAGTCCTGTTCTCTTAACCTGGGGGTGCGATACACTGCCTGCCTaGCCCTTCCCGTCGACCTGT +
Preference number: 2 (lower is better)
Translates to: MLLARQVHHSPVLLTWGCDTLPA*PFPSTC
Trigger: ACAGGTCGACGGGAAGGGCCAGGCAGGCAGTGTATC...GCACCCCCAGGTTAAGAGAACAGGACTGTGGTGAACCTGCCTCGCCAGCAGCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
3UTR-3UTR GCA 90 bp ATGCTGCTGGCGAGGCAGGTTCACCACAGTCCTGTTCTCTTAACCTGGGGGTGCTTCAGATACACTGCCTaGCTGGCCCTTCCCGTCGAC +
Preference number: 2 (lower is better)
Translates to: MLLARQVHHSPVLLTWGCFRYTA*LALPVD
Trigger: GTCGACGGGAAGGGCCAGGCAGGCAGTGTATCTGAA...GCACCCCCAGGTTAAGAGAACAGGACTGTGGTGAACCTGCCTCGCCAGCAGCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
3UTR-3UTR CCA 90 bp CCACAGTCCTGTTCTCTTAACCTGGGGGTGCTAGCTCCGTCCGCTTTCACCTCTGGAGATGGATGCTGCTaGCGAGGCAGGTTCACCACA +
Preference number: 2 (lower is better)
Translates to: PQSCSLNLGVLAPSAFTSGDGCC*RGRFTT
Trigger: TGTGGTGAACCTGCCTCGCCAGCAGCATCCATCTCC...AGAGGTGAAAGCGGACGGAGCTAGCACCCCCAGGTTAAGAGAACAGGACTGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
3UTR-3UTR CCA 90 bp CCGTCGACCTGTTCCCCAGAGAGTCTGGAGATGGATGCTGCTGGCGAGGCAGGTAACAGTCAGGAAACCTaGTGTTCCCCATGCAACAGC +
Preference number: 2 (lower is better)
Translates to: PSTCSPESLEMDAAGEAGNSQET*CSPCNS
Trigger: GCTGTTGCATGGGGAACACCAGGTTTCCTGACTGTT...ACCTGCCTCGCCAGCAGCATCCATCTCCAGACTCTCTGGGGAACAGGTCGACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519011.5
ENST00000521195.1
3UTR-3UTR TCA 90 bp AGAGTCTGGAGATGGATGCTGCTGGCGAGGCAGGTTCACCACAGTCCTGTTCTCGAGGCTGCTTGGTTCTaGAGAACTGGGGACCTGCAA +
Preference number: 2 (lower is better)
Translates to: RVWRWMLLARQVHHSPVLEAAWF*RTGDLQ
Trigger: TTGCAGGTCCCCAGTTCTTCAGAACCAAGCAGCCTC...GAGAACAGGACTGTGGTGAACCTGCCTCGCCAGCAGCATCCATCTCCAGACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
3UTR-3UTR GCA 90 bp CCGTCGACCTGTTCCCCAGAGAGTCTGGAGATGGATGCTGCTGGCGAGGCAGGTAGAAGTGCCATGATTTaGTGTAGCTCCTGTGCTGGT +
Preference number: 2 (lower is better)
Translates to: PSTCSPESLEMDAAGEAGRSAMI*CSSCAG
Trigger: ACCAGCACAGGAGCTACAGCAAATCATGGCACTTCT...ACCTGCCTCGCCAGCAGCATCCATCTCCAGACTCTCTGGGGAACAGGTCGACGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
3UTR-3UTR GCA 90 bp CCTGGCCCTTCCCGTCGACCTGTTCCCCAGAGAGTCTGGAGATGGATGCTGCTGGCGAGAGGAAGAAAATaGTGTGCCAGCATCTTAGCT +
Preference number: 2 (lower is better)
Translates to: PGPSRRPVPQRVWRWMLLARGRK*CASILA
Trigger: AGCTAAGATGCTGGCACAGCATTTTCTTCCTCTCGC...CAGCAGCATCCATCTCCAGACTCTCTGGGGAACAGGTCGACGGGAAGGGCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521195.1
3UTR-3UTR CCA 90 bp CCGTCGACCTGTTCCCCAGAGAGTCTGGAGATGGATGCTGCTGGCGAGGCAGGTTTGGTTCTGAAGAACTaGGGACCTGCAAATTGTTGC +
Preference number: 2 (lower is better)
Translates to: PSTCSPESLEMDAAGEAGLVLKN*GPANCC
Trigger: GCAACAATTTGCAGGTCCCCAGTTCTTCAGAACCAA...ACCTGCCTCGCCAGCAGCATCCATCTCCAGACTCTCTGGGGAACAGGTCGACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
3UTR-3UTR CCA 90 bp CCTGGCCCTTCCCGTCGACCTGTTCCCCAGAGAGTCTGGAGATGGATGCTGCTGTTGGTTCTGAAGAACTaGGGACCTGCAAATTGTTGC +
Preference number: 2 (lower is better)
Translates to: PGPSRRPVPQRVWRWMLLLVLKN*GPANCC
Trigger: GCAACAATTTGCAGGTCCCCAGTTCTTCAGAACCAA...CAGCAGCATCCATCTCCAGACTCTCTGGGGAACAGGTCGACGGGAAGGGCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
3UTR-3UTR TCA 90 bp AGAGTCTGGAGATGGATGCTGCTGGCGAGGCAGGTTCACCACAGTCCTGTTCTCGAGATGTGGAACCTTTaGGGCTGCTTGGTTCTGAAG +
Preference number: 2 (lower is better)
Translates to: RVWRWMLLARQVHHSPVLEMWNL*GCLVLK
Trigger: CTTCAGAACCAAGCAGCCTCAAAGGTTCCACATCTC...GAGAACAGGACTGTGGTGAACCTGCCTCGCCAGCAGCATCCATCTCCAGACTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
3UTR-3UTR GCA 90 bp TTTGGACTAATCCTTCCTTCACTCCGCGCACTTTCAGATACACTGCCTGCCTGGTCTGGAGATGGATGCTaGTGGCGAGGCAGGTTCACC +
Preference number: 2 (lower is better)
Translates to: FGLILPSLRALSDTLPAWSGDGC*WRGRFT
Trigger: GGTGAACCTGCCTCGCCAGCAGCATCCATCTCCAGA...CCAGGCAGGCAGTGTATCTGAAAGTGCGCGGAGTGAAGGAAGGATTAGTCCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
3UTR-3UTR GCA 90 bp AGAGTCTGGAGATGGATGCTGCTGGCGAGGCAGGTTCACCACAGTCCTGTTCTCACCTGGTGTTCCCCATaGAACAGCATGAAACCACAC +
Preference number: 2 (lower is better)
Translates to: RVWRWMLLARQVHHSPVLTWCSP*NSMKPH
Trigger: GTGTGGTTTCATGCTGTTGCATGGGGAACACCAGGT...GAGAACAGGACTGTGGTGAACCTGCCTCGCCAGCAGCATCCATCTCCAGACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519011.5
ENST00000521195.1
3UTR-3UTR GCA 90 bp CCTGGCCCTTCCCGTCGACCTGTTCCCCAGAGAGTCTGGAGATGGATGCTGCTGCCAGAAGTCTTAAGATaGCTTGGACACCAAAATCCA +
Preference number: 2 (lower is better)
Translates to: PGPSRRPVPQRVWRWMLLPEVLR*LGHQNP
Trigger: TGGATTTTGGTGTCCAAGGCATCTTAAGACTTCTGG...CAGCAGCATCCATCTCCAGACTCTCTGGGGAACAGGTCGACGGGAAGGGCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521195.1
3UTR-3UTR TCA 90 bp ATGCTGCTGGCGAGGCAGGTTCACCACAGTCCTGTTCTCTTAACCTGGGGGTGCTGTTCTTCAAGTATCTaGATGACAACCACCTCCCTG +
Preference number: 2 (lower is better)
Translates to: MLLARQVHHSPVLLTWGCCSSSI*MTTTSL
Trigger: CAGGGAGGTGGTTGTCATTCAGATACTTGAAGAACA...GCACCCCCAGGTTAAGAGAACAGGACTGTGGTGAACCTGCCTCGCCAGCAGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
3UTR-3UTR TCA 90 bp CCTGGCCCTTCCCGTCGACCTGTTCCCCAGAGAGTCTGGAGATGGATGCTGCTGGGCCATCATGTTGTATaGCTTGTCGAACATGATTTA +
Preference number: 2 (lower is better)
Translates to: PGPSRRPVPQRVWRWMLLGHHVV*LVEHDL
Trigger: TAAATCATGTTCGACAAGTCATACAACATGATGGCC...CAGCAGCATCCATCTCCAGACTCTCTGGGGAACAGGTCGACGGGAAGGGCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519011.5
ENST00000521195.1
3UTR-3UTR TCA 90 bp CCGTCGACCTGTTCCCCAGAGAGTCTGGAGATGGATGCTGCTGGCGAGGCAGGTGGCCATCATGTTGTATaGCTTGTCGAACATGATTTA +
Preference number: 2 (lower is better)
Translates to: PSTCSPESLEMDAAGEAGGHHVV*LVEHDL
Trigger: TAAATCATGTTCGACAAGTCATACAACATGATGGCC...ACCTGCCTCGCCAGCAGCATCCATCTCCAGACTCTCTGGGGAACAGGTCGACGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519011.5
ENST00000521195.1
3UTR-3UTR GCA 90 bp ATGCTGCTGGCGAGGCAGGTTCACCACAGTCCTGTTCTCTTAACCTGGGGGTGCCAAATTGTTGCTCTGTaGCAGGCCAGTGTCAGTAAT +
Preference number: 2 (lower is better)
Translates to: MLLARQVHHSPVLLTWGCQIVAL*QASVSN
Trigger: ATTACTGACACTGGCCTGGCACAGAGCAACAATTTG...GCACCCCCAGGTTAAGAGAACAGGACTGTGGTGAACCTGCCTCGCCAGCAGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
3UTR-3UTR GCA 90 bp CTAGCTCCGTCCGCTTTCACCTCTCTCATTGATGTTTCTGGTGAGGTTTGGATTTCTGGAGATGGATGCTaGTGGCGAGGCAGGTTCACC +
Preference number: 2 (lower is better)
Translates to: LAPSAFTSLIDVSGEVWISGDGC*WRGRFT
Trigger: GGTGAACCTGCCTCGCCAGCAGCATCCATCTCCAGA...AATCCAAACCTCACCAGAAACATCAATGAGAGAGGTGAAAGCGGACGGAGCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
3UTR-3UTR GCA 90 bp TGCCAGGCCAGTGTCAGTAATATCACTCTTTGGACTAATCCTTCCTTCACTCCGTTCAGATACACTGCCTaGCTGGCCCTTCCCGTCGAC +
Preference number: 2 (lower is better)
Translates to: CQASVSNITLWTNPSFTPFRYTA*LALPVD
Trigger: GTCGACGGGAAGGGCCAGGCAGGCAGTGTATCTGAA...CGGAGTGAAGGAAGGATTAGTCCAAAGAGTGATATTACTGACACTGGCCTGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
3UTR-3UTR GCA 90 bp CCACAGTCCTGTTCTCTTAACCTGGGGGTGCTAGCTCCGTCCGCTTTCACCTCTCAAATTGTTGCTCTGTaGCAGGCCAGTGTCAGTAAT +
Preference number: 2 (lower is better)
Translates to: PQSCSLNLGVLAPSAFTSQIVAL*QASVSN
Trigger: ATTACTGACACTGGCCTGGCACAGAGCAACAATTTG...AGAGGTGAAAGCGGACGGAGCTAGCACCCCCAGGTTAAGAGAACAGGACTGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
3UTR-3UTR GCA 90 bp TGTTCTCTTAACCTGGGGGTGCTAGCTCCGTCCGCTTTCACCTCTCTCATTGATGGACCTGCAAATTGTTaGTCTGTGCCAGGCCAGTGT +
Preference number: 2 (lower is better)
Translates to: CSLNLGVLAPSAFTSLIDGPANC*SVPGQC
Trigger: ACACTGGCCTGGCACAGAGCAACAATTTGCAGGTCC...ATCAATGAGAGAGGTGAAAGCGGACGGAGCTAGCACCCCCAGGTTAAGAGAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
3UTR-3UTR CCA 90 bp TGCCAGGCCAGTGTCAGTAATATCACTCTTTGGACTAATCCTTCCTTCACTCCGGTTCCCCAGAGAGTCTaGAGATGGATGCTGCTGGCG +
Preference number: 2 (lower is better)
Translates to: CQASVSNITLWTNPSFTPVPQRV*RWMLLA
Trigger: CGCCAGCAGCATCCATCTCCAGACTCTCTGGGGAAC...CGGAGTGAAGGAAGGATTAGTCCAAAGAGTGATATTACTGACACTGGCCTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
3UTR-3UTR CCA 90 bp GTACAAAGTAGCGAGAAGCATCCAGGTCATAAAGGCCAACAAAGCAAACTCCACGATACACTGCCTGCCTaGCCCTTCCCGTCGACCTGT +
Preference number: 2 (lower is better)
Translates to: VQSSEKHPGHKGQQSKLHDTLPA*PFPSTC
Trigger: ACAGGTCGACGGGAAGGGCCAGGCAGGCAGTGTATC...GTGGAGTTTGCTTTGTTGGCCTTTATGACCTGGATGCTTCTCGCTACTTTGTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519011.5
ENST00000521195.1
3UTR-3UTR TCA 90 bp TTGGTTCTGAAGAACTGGGGACCTGCAAATTGTTGCTCTGTGCCAGGCCAGTGTACTGCAGAAGTGCCATaGTTTGCTGTAGCTCCTGTG +
Preference number: 2 (lower is better)
Translates to: LVLKNWGPANCCSVPGQCTAEVP*FAVAPV
Trigger: CACAGGAGCTACAGCAAATCATGGCACTTCTGCAGT...ACACTGGCCTGGCACAGAGCAACAATTTGCAGGTCCCCAGTTCTTCAGAACCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
3UTR-3UTR TCA 90 bp GCCATGATTTGCTGTAGCTCCTGTGCTGGTTCCCATGGATTTGGAAATGACCTTGAGGCTGCTTGGTTCTaGAGAACTGGGGACCTGCAA +
Preference number: 2 (lower is better)
Translates to: AMICCSSCAGSHGFGNDLEAAWF*RTGDLQ
Trigger: TTGCAGGTCCCCAGTTCTTCAGAACCAAGCAGCCTC...AAGGTCATTTCCAAATCCATGGGAACCAGCACAGGAGCTACAGCAAATCATGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
3UTR-3UTR TCA 90 bp TGGACTAATCCTTCCTTCACTCCGCGCACTTTCAGATACACTGCCTGCCTGGCCCAAGATACAAGCCGCTaGAGACTCCAATTCGAATCA +
Preference number: 2 (lower is better)
Translates to: WTNPSFTPRTFRYTACLAQDTSR*RLQFES
Trigger: TGATTCGAATTGGAGTCTTCAGCGGCTTGTATCTTG...GGCCAGGCAGGCAGTGTATCTGAAAGTGCGCGGAGTGAAGGAAGGATTAGTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519011.5
ENST00000521195.1
3UTR-3UTR GCA 90 bp CACAAAGGCACAGTGGCAAGAGTACAAAGTAGCGAGAAGCATCCAGGTCATAAAGAGTCTGGAGATGGATaGTGCTGGCGAGGCAGGTTC +
Preference number: 2 (lower is better)
Translates to: HKGTVARVQSSEKHPGHKESGDG*CWRGRF
Trigger: GAACCTGCCTCGCCAGCAGCATCCATCTCCAGACTC...TTTATGACCTGGATGCTTCTCGCTACTTTGTACTCTTGCCACTGTGCCTTTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519011.5
ENST00000521195.1
3UTR-3UTR GCA 90 bp GTACAAAGTAGCGAGAAGCATCCAGGTCATAAAGGCCAACAAAGCAAACTCCACTTCAGATACACTGCCTaGCTGGCCCTTCCCGTCGAC +
Preference number: 2 (lower is better)
Translates to: VQSSEKHPGHKGQQSKLHFRYTA*LALPVD
Trigger: GTCGACGGGAAGGGCCAGGCAGGCAGTGTATCTGAA...GTGGAGTTTGCTTTGTTGGCCTTTATGACCTGGATGCTTCTCGCTACTTTGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519011.5
ENST00000521195.1
3UTR-3UTR GCA 90 bp TGTTCTCTTAACCTGGGGGTGCTAGCTCCGTCCGCTTTCACCTCTCTCATTGATGAAGAACTGGGGACCTaGAAATTGTTGCTCTGTGCC +
Preference number: 2 (lower is better)
Translates to: CSLNLGVLAPSAFTSLIDEELGT*KLLLCA
Trigger: GGCACAGAGCAACAATTTGCAGGTCCCCAGTTCTTC...ATCAATGAGAGAGGTGAAAGCGGACGGAGCTAGCACCCCCAGGTTAAGAGAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
3UTR-3UTR GCA 90 bp TTGGTTCTGAAGAACTGGGGACCTGCAAATTGTTGCTCTGTGCCAGGCCAGTGTACCTGGTGTTCCCCATaGAACAGCATGAAACCACAC +
Preference number: 2 (lower is better)
Translates to: LVLKNWGPANCCSVPGQCTWCSP*NSMKPH
Trigger: GTGTGGTTTCATGCTGTTGCATGGGGAACACCAGGT...ACACTGGCCTGGCACAGAGCAACAATTTGCAGGTCCCCAGTTCTTCAGAACCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519011.5
ENST00000521195.1
3UTR-3UTR GCA 90 bp CCACAGTCCTGTTCTCTTAACCTGGGGGTGCTAGCTCCGTCCGCTTTCACCTCTTTCTGGTCGAGCTTTTaGTTTTGCCTGATAAGGACA +
Preference number: 2 (lower is better)
Translates to: PQSCSLNLGVLAPSAFTSFWSSF*FCLIRT
Trigger: TGTCCTTATCAGGCAAAAGCAAAAGCTCGACCAGAA...AGAGGTGAAAGCGGACGGAGCTAGCACCCCCAGGTTAAGAGAACAGGACTGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000523933.5
3UTR-3UTR CCA 90 bp CACAAAGGCACAGTGGCAAGAGTACAAAGTAGCGAGAAGCATCCAGGTCATAAAGGAGATGGATGCTGCTaGCGAGGCAGGTTCACCACA +
Preference number: 2 (lower is better)
Translates to: HKGTVARVQSSEKHPGHKGDGCC*RGRFTT
Trigger: TGTGGTGAACCTGCCTCGCCAGCAGCATCCATCTCC...TTTATGACCTGGATGCTTCTCGCTACTTTGTACTCTTGCCACTGTGCCTTTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519011.5
ENST00000521195.1
3UTR-3UTR CCA 90 bp ACCACACTGCTTTTTGCTCGATGGCTTCACAACTCCATTTTCTTCCTGCAGCTACAGAGAGTCTGGAGATaGATGCTGCTGGCGAGGCAG +
Preference number: 2 (lower is better)
Translates to: TTLLFARWLHNSIFFLQLQRVWR*MLLARQ
Trigger: CTGCCTCGCCAGCAGCATCCATCTCCAGACTCTCTG...TAGCTGCAGGAAGAAAATGGAGTTGTGAAGCCATCGAGCAAAAAGCAGTGTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521195.1
3UTR-3UTR CCA 90 bp ATGATTTGCTGTAGCTCCTGTGCTGGTTCCCATGGATTTGGAAATGACCTTCAGCAGAGAGTCTGGAGATaGATGCTGCTGGCGAGGCAG +
Preference number: 2 (lower is better)
Translates to: MICCSSCAGSHGFGNDLQQRVWR*MLLARQ
Trigger: CTGCCTCGCCAGCAGCATCCATCTCCAGACTCTCTG...CTGAAGGTCATTTCCAAATCCATGGGAACCAGCACAGGAGCTACAGCAAATCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
3UTR-3UTR CCA 90 bp TTGGTTCTGAAGAACTGGGGACCTGCAAATTGTTGCTCTGTGCCAGGCCAGTGTAACAGTCAGGAAACCTaGTGTTCCCCATGCAACAGC +
Preference number: 2 (lower is better)
Translates to: LVLKNWGPANCCSVPGQCNSQET*CSPCNS
Trigger: GCTGTTGCATGGGGAACACCAGGTTTCCTGACTGTT...ACACTGGCCTGGCACAGAGCAACAATTTGCAGGTCCCCAGTTCTTCAGAACCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519011.5
ENST00000521195.1
3UTR CAA 90 bp CTGTGCCAGCATCTTAGCTGTAGCATGTTTCCTTACAGCCTGAGCTaGAATTCTAGCCCACCTGGCGATTCTATGAGCTACCTGCTACTC +
Preference number: 2 (lower is better)
Translates to: LCQHLSCSMFPYSLS*NSSPPGDSMSYLLL
Trigger: GAGTAGCAGGTAGCTCATAGAATCGCCAGGTGGGCTAGAATTCAAGCTCAGGCTGTAAGGAAACATGCTACAGCTAAGATGCTGGCACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521195.1
3UTR-3UTR TCA 90 bp CCACAGTCCTGTTCTCTTAACCTGGGGGTGCTAGCTCCGTCCGCTTTCACCTCTATAGTGGACACTCTTTaGGTAAGCACCTTATTTCAG +
Preference number: 2 (lower is better)
Translates to: PQSCSLNLGVLAPSAFTSIVDTL*VSTLFQ
Trigger: CTGAAATAAGGTGCTTACTCAAAGAGTGTCCACTAT...AGAGGTGAAAGCGGACGGAGCTAGCACCCCCAGGTTAAGAGAACAGGACTGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522484.5
3UTR-3UTR GCA 90 bp TGGACTAATCCTTCCTTCACTCCGCGCACTTTCAGATACACTGCCTGCCTGGCCGCTAGTAATTGCTACTaGAGAAGTGCCATGATTTGC +
Preference number: 2 (lower is better)
Translates to: WTNPSFTPRTFRYTACLAASNCY*RSAMIC
Trigger: GCAAATCATGGCACTTCTGCAGTAGCAATTACTAGC...GGCCAGGCAGGCAGTGTATCTGAAAGTGCGCGGAGTGAAGGAAGGATTAGTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
3UTR-3UTR GCA 90 bp AGGACATGGGATATGGTACTGACGACAATGATCAGAGACCCAAGTTATCTCCCACACTTTCAGATACACTaGCTGCCTGGCCCTTCCCGT +
Preference number: 2 (lower is better)
Translates to: RTWDMVLTTMIRDPSYLPHFQIH*LPGPSR
Trigger: ACGGGAAGGGCCAGGCAGGCAGTGTATCTGAAAGTG...TGGGAGATAACTTGGGTCTCTGATCATTGTCGTCAGTACCATATCCCATGTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519011.5
ENST00000521195.1
3UTR-3UTR GCA 90 bp GCCATGATTTGCTGTAGCTCCTGTGCTGGTTCCCATGGATTTGGAAATGACCTTGGACCTGCAAATTGTTaGTCTGTGCCAGGCCAGTGT +
Preference number: 2 (lower is better)
Translates to: AMICCSSCAGSHGFGNDLGPANC*SVPGQC
Trigger: ACACTGGCCTGGCACAGAGCAACAATTTGCAGGTCC...AAGGTCATTTCCAAATCCATGGGAACCAGCACAGGAGCTACAGCAAATCATGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
3UTR-3UTR CCA 90 bp TGTTCTCTTAACCTGGGGGTGCTAGCTCCGTCCGCTTTCACCTCTCTCATTGATCATGGAGGCGCACACTaGTCAATTCCCAGAAACTTA +
Preference number: 2 (lower is better)
Translates to: CSLNLGVLAPSAFTSLIDHGGAH*SIPRNL
Trigger: TAAGTTTCTGGGAATTGACCAGTGTGCGCCTCCATG...ATCAATGAGAGAGGTGAAAGCGGACGGAGCTAGCACCCCCAGGTTAAGAGAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521195.1
3UTR-3UTR TCA 90 bp TGCCAGGCCAGTGTCAGTAATATCACTCTTTGGACTAATCCTTCCTTCACTCCGCCCCATGCAACAGCATaGAACCACACTGCTTTTTGC +
Preference number: 2 (lower is better)
Translates to: CQASVSNITLWTNPSFTPPHATA*NHTAFC
Trigger: GCAAAAAGCAGTGTGGTTTCATGCTGTTGCATGGGG...CGGAGTGAAGGAAGGATTAGTCCAAAGAGTGATATTACTGACACTGGCCTGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000519011.5
ENST00000521195.1
3UTR-3UTR TCA 90 bp CACACAAAGGCACAGTGGCAAGAGTACAAAGTAGCGAGAAGCATCCAGGTCATACCCCATGCAACAGCATaGAACCACACTGCTTTTTGC +
Preference number: 2 (lower is better)
Translates to: HTKAQWQEYKVARSIQVIPHATA*NHTAFC
Trigger: GCAAAAAGCAGTGTGGTTTCATGCTGTTGCATGGGG...TATGACCTGGATGCTTCTCGCTACTTTGTACTCTTGCCACTGTGCCTTTGTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000523933.5
3UTR-3UTR GCA 90 bp GCCATGATTTGCTGTAGCTCCTGTGCTGGTTCCCATGGATTTGGAAATGACCTTGAAGAACTGGGGACCTaGAAATTGTTGCTCTGTGCC +
Preference number: 2 (lower is better)
Translates to: AMICCSSCAGSHGFGNDLEELGT*KLLLCA
Trigger: GGCACAGAGCAACAATTTGCAGGTCCCCAGTTCTTC...AAGGTCATTTCCAAATCCATGGGAACCAGCACAGGAGCTACAGCAAATCATGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
3UTR-3UTR CCA 90 bp GAGCTTTTGCTTTTGCCTGATAAGGACATGGGATATGGTACTGACGACAATGATGTTCCCCAGAGAGTCTaGAGATGGATGCTGCTGGCG +
Preference number: 2 (lower is better)
Translates to: ELLLLPDKDMGYGTDDNDVPQRV*RWMLLA
Trigger: CGCCAGCAGCATCCATCTCCAGACTCTCTGGGGAAC...ATCATTGTCGTCAGTACCATATCCCATGTCCTTATCAGGCAAAAGCAAAAGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000519011.5
ENST00000521195.1
3UTR-3UTR CCA 90 bp CACACAAAGGCACAGTGGCAAGAGTACAAAGTAGCGAGAAGCATCCAGGTCATAAACAGTCAGGAAACCTaGTGTTCCCCATGCAACAGC +
Preference number: 2 (lower is better)
Translates to: HTKAQWQEYKVARSIQVINSQET*CSPCNS
Trigger: GCTGTTGCATGGGGAACACCAGGTTTCCTGACTGTT...TATGACCTGGATGCTTCTCGCTACTTTGTACTCTTGCCACTGTGCCTTTGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000523933.5
3UTR-3UTR CCA 90 bp TGTTCTCTTAACCTGGGGGTGCTAGCTCCGTCCGCTTTCACCTCTCTCATTGATTGCCTGATAAGGACATaGGATATGGTACTGACGACA +
Preference number: 2 (lower is better)
Translates to: CSLNLGVLAPSAFTSLIDCLIRT*DMVLTT
Trigger: TGTCGTCAGTACCATATCCCATGTCCTTATCAGGCA...ATCAATGAGAGAGGTGAAAGCGGACGGAGCTAGCACCCCCAGGTTAAGAGAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000523933.5
3UTR-3UTR CCA 90 bp AGTCTGGAGATGGATGCTGCTGGCGAGGCAGGTTCACCACAGTCCTGTTCTCTTTTGTTCTATGCAGGTTaGTACAAATGCTTTGCAGAG +
Preference number: 2 (lower is better)
Translates to: SLEMDAAGEAGSPQSCSLLFYAG*YKCFAE
Trigger: CTCTGCAAAGCATTTGTACCAACCTGCATAGAACAA...AAGAGAACAGGACTGTGGTGAACCTGCCTCGCCAGCAGCATCCATCTCCAGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521195.1
3UTR-3UTR TCA 90 bp GACCCAAGTTATCTCCCAGGTAATCCTGTTCACTTGCTCATAGACGTAACATCCCCCCATGCAACAGCATaGAACCACACTGCTTTTTGC +
Preference number: 2 (lower is better)
Translates to: DPSYLPGNPVHLLIDVTSPHATA*NHTAFC
Trigger: GCAAAAAGCAGTGTGGTTTCATGCTGTTGCATGGGG...GGATGTTACGTCTATGAGCAAGTGAACAGGATTACCTGGGAGATAACTTGGGTC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000523933.5
3UTR-3UTR GCA 90 bp TGCCAGGCCAGTGTCAGTAATATCACTCTTTGGACTAATCCTTCCTTCACTCCGAGAAGTGCCATGATTTaGTGTAGCTCCTGTGCTGGT +
Preference number: 2 (lower is better)
Translates to: CQASVSNITLWTNPSFTPRSAMI*CSSCAG
Trigger: ACCAGCACAGGAGCTACAGCAAATCATGGCACTTCT...CGGAGTGAAGGAAGGATTAGTCCAAAGAGTGATATTACTGACACTGGCCTGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
3UTR-3UTR GCA 90 bp TGTTCTCTTAACCTGGGGGTGCTAGCTCCGTCCGCTTTCACCTCTCTCATTGATATCATGGCTAGTAATTaGTACTGCAGAAGTGCCATG +
Preference number: 2 (lower is better)
Translates to: CSLNLGVLAPSAFTSLIDIMASN*YCRSAM
Trigger: CATGGCACTTCTGCAGTAGCAATTACTAGCCATGAT...ATCAATGAGAGAGGTGAAAGCGGACGGAGCTAGCACCCCCAGGTTAAGAGAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000523933.5
3UTR-3UTR GCA 90 bp TTGCCTGATAAGGACATGGGATATGGTACTGACGACAATGATCAGAGACCCAAGACCTGGTGTTCCCCATaGAACAGCATGAAACCACAC +
Preference number: 2 (lower is better)
Translates to: LPDKDMGYGTDDNDQRPKTWCSP*NSMKPH
Trigger: GTGTGGTTTCATGCTGTTGCATGGGGAACACCAGGT...CTTGGGTCTCTGATCATTGTCGTCAGTACCATATCCCATGTCCTTATCAGGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000523933.5
3UTR-3UTR CCA 90 bp CTAGCTCCGTCCGCTTTCACCTCTCTCATTGATGTTTCTGGTGAGGTTTGGATTCACACAAAGGCACAGTaGCAAGAGTACAAAGTAGCG +
Preference number: 2 (lower is better)
Translates to: LAPSAFTSLIDVSGEVWIHTKAQ*QEYKVA
Trigger: CGCTACTTTGTACTCTTGCCACTGTGCCTTTGTGTG...AATCCAAACCTCACCAGAAACATCAATGAGAGAGGTGAAAGCGGACGGAGCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000523933.5
3UTR-3UTR CCA 90 bp ACCACACTGCTTTTTGCTCGATGGCTTCACAACTCCATTTTCTTCCTGCAGCTAATACATGTTGGGGCATaGAGGCGCACACTGGTCAAT +
Preference number: 2 (lower is better)
Translates to: TTLLFARWLHNSIFFLQLIHVGA*RRTLVN
Trigger: ATTGACCAGTGTGCGCCTCCATGCCCCAACATGTAT...TAGCTGCAGGAAGAAAATGGAGTTGTGAAGCCATCGAGCAAAAAGCAGTGTGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000521195.1
3UTR-3UTR TCA 90 bp AGTTATCTCCCAGGTAATCCTGTTCACTTGCTCATAGACGTAACATCCGAGAAGACTGCAGAAGTGCCATaGTTTGCTGTAGCTCCTGTG +
Preference number: 2 (lower is better)
Translates to: SYLPGNPVHLLIDVTSEKTAEVP*FAVAPV
Trigger: CACAGGAGCTACAGCAAATCATGGCACTTCTGCAGT...CTTCTCGGATGTTACGTCTATGAGCAAGTGAACAGGATTACCTGGGAGATAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000523933.5
3UTR-3UTR TCA 90 bp ATGATTTGCTGTAGCTCCTGTGCTGGTTCCCATGGATTTGGAAATGACCTTCAGCTTCAAGTATCTGAATaGCAACCACCTCCCTGCTCT +
Preference number: 2 (lower is better)
Translates to: MICCSSCAGSHGFGNDLQLQVSE*QPPPCS
Trigger: AGAGCAGGGAGGTGGTTGTCATTCAGATACTTGAAG...CTGAAGGTCATTTCCAAATCCATGGGAACCAGCACAGGAGCTACAGCAAATCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
3UTR-3UTR TCA 90 bp TGTTCTCTTAACCTGGGGGTGCTAGCTCCGTCCGCTTTCACCTCTCTCATTGATGGCCATCATGTTGTATaGCTTGTCGAACATGATTTA +
Preference number: 2 (lower is better)
Translates to: CSLNLGVLAPSAFTSLIDGHHVV*LVEHDL
Trigger: TAAATCATGTTCGACAAGTCATACAACATGATGGCC...ATCAATGAGAGAGGTGAAAGCGGACGGAGCTAGCACCCCCAGGTTAAGAGAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000523933.5
3UTR-3UTR TCA 90 bp TGTTCTCTTAACCTGGGGGTGCTAGCTCCGTCCGCTTTCACCTCTCTCATTGATAGTTTCAATGTTTGGTaGACATTCCAGATTTGCGAG +
Preference number: 2 (lower is better)
Translates to: CSLNLGVLAPSAFTSLIDSFNVW*TFQICE
Trigger: CTCGCAAATCTGGAATGTTCACCAAACATTGAAACT...ATCAATGAGAGAGGTGAAAGCGGACGGAGCTAGCACCCCCAGGTTAAGAGAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521195.1
3UTR-3UTR GCA 90 bp TGGTCGAGCTTTTGCTTTTGCCTGATAAGGACATGGGATATGGTACTGACGACAAGAAGTGCCATGATTTaGTGTAGCTCCTGTGCTGGT +
Preference number: 2 (lower is better)
Translates to: WSSFCFCLIRTWDMVLTTRSAMI*CSSCAG
Trigger: ACCAGCACAGGAGCTACAGCAAATCATGGCACTTCT...TGTCGTCAGTACCATATCCCATGTCCTTATCAGGCAAAAGCAAAAGCTCGACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000523933.5
3UTR-3UTR GCA 90 bp AAACAGTGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGAGTAACGAGCACTTTCAGATACACTaGCTGCCTGGCCCTTCCCGT +
Preference number: 2 (lower is better)
Translates to: KQCIGHFQCNTNLLLSNEHFQIH*LPGPSR
Trigger: ACGGGAAGGGCCAGGCAGGCAGTGTATCTGAAAGTG...CTCGTTACTCAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCACTGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
3UTR-3UTR GCA 90 bp CTAGCTCCGTCCGCTTTCACCTCTCTCATTGATGTTTCTGGTGAGGTTTGGATTACCCAGCCCATTCTGTaGATGTCTTTTTGCTTCCAA +
Preference number: 2 (lower is better)
Translates to: LAPSAFTSLIDVSGEVWITQPIL*MSFCFQ
Trigger: TTGGAAGCAAAAAGACATGCACAGAATGGGCTGGGT...AATCCAAACCTCACCAGAAACATCAATGAGAGAGGTGAAAGCGGACGGAGCTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000523933.5
3UTR-3UTR CCA 90 bp TGGACTAATCCTTCCTTCACTCCGCGCACTTTCAGATACACTGCCTGCCTGGCCAGTAATATCACTCTTTaGACTAATCCTTCCTTCACT +
Preference number: 2 (lower is better)
Translates to: WTNPSFTPRTFRYTACLASNITL*TNPSFT
Trigger: AGTGAAGGAAGGATTAGTCCAAAGAGTGATATTACT...GGCCAGGCAGGCAGTGTATCTGAAAGTGCGCGGAGTGAAGGAAGGATTAGTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
3UTR-3UTR TCA 90 bp ATGATTTGCTGTAGCTCCTGTGCTGGTTCCCATGGATTTGGAAATGACCTTCAGTGTTCTTCAAGTATCTaGATGACAACCACCTCCCTG +
Preference number: 2 (lower is better)
Translates to: MICCSSCAGSHGFGNDLQCSSSI*MTTTSL
Trigger: CAGGGAGGTGGTTGTCATTCAGATACTTGAAGAACA...CTGAAGGTCATTTCCAAATCCATGGGAACCAGCACAGGAGCTACAGCAAATCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
3UTR-3UTR GCA 90 bp TGCCAGGCCAGTGTCAGTAATATCACTCTTTGGACTAATCCTTCCTTCACTCCGGCTAGTAATTGCTACTaGAGAAGTGCCATGATTTGC +
Preference number: 2 (lower is better)
Translates to: CQASVSNITLWTNPSFTPASNCY*RSAMIC
Trigger: GCAAATCATGGCACTTCTGCAGTAGCAATTACTAGC...CGGAGTGAAGGAAGGATTAGTCCAAAGAGTGATATTACTGACACTGGCCTGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
3UTR-3UTR GCA 90 bp TGGTCGAGCTTTTGCTTTTGCCTGATAAGGACATGGGATATGGTACTGACGACAAGGAAGAAAATGCTGTaGCAGCATCTTAGCTGTAGC +
Preference number: 2 (lower is better)
Translates to: WSSFCFCLIRTWDMVLTTRKKML*QHLSCS
Trigger: GCTACAGCTAAGATGCTGGCACAGCATTTTCTTCCT...TGTCGTCAGTACCATATCCCATGTCCTTATCAGGCAAAAGCAAAAGCTCGACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000521195.1
3UTR-3UTR CCA 90 bp AGTTATCTCCCAGGTAATCCTGTTCACTTGCTCATAGACGTAACATCCGAGAAGCACACAAAGGCACAGTaGCAAGAGTACAAAGTAGCG +
Preference number: 2 (lower is better)
Translates to: SYLPGNPVHLLIDVTSEKHTKAQ*QEYKVA
Trigger: CGCTACTTTGTACTCTTGCCACTGTGCCTTTGTGTG...CTTCTCGGATGTTACGTCTATGAGCAAGTGAACAGGATTACCTGGGAGATAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000523933.5
3UTR-3UTR CCA 90 bp ATGATTTGCTGTAGCTCCTGTGCTGGTTCCCATGGATTTGGAAATGACCTTCAGTGCCTGATAAGGACATaGGATATGGTACTGACGACA +
Preference number: 2 (lower is better)
Translates to: MICCSSCAGSHGFGNDLQCLIRT*DMVLTT
Trigger: TGTCGTCAGTACCATATCCCATGTCCTTATCAGGCA...CTGAAGGTCATTTCCAAATCCATGGGAACCAGCACAGGAGCTACAGCAAATCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000523933.5
3UTR CAA 90 bp CCTAGGACAACAGTGTCACCAAGTTCTAGCTTCTCATCTGCCTTATaGCAGGCTGTGCTATCGCCTAGCAAAAATCCAATGAAGTACATA +
Preference number: 2 (lower is better)
Translates to: PRTTVSPSSSFSSAL*QAVLSPSKNPMKYI
Trigger: TATGTACTTCATTGGATTTTTGCTAGGCGATAGCACAGCCTGCAATAAGGCAGATGAGAAGCTAGAACTTGGTGACACTGTTGTCCTAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521195.1
3UTR-3UTR TCA 90 bp AGTTATCTCCCAGGTAATCCTGTTCACTTGCTCATAGACGTAACATCCGAGAAGCAAGATACAAGCCGCTaGAGACTCCAATTCGAATCA +
Preference number: 2 (lower is better)
Translates to: SYLPGNPVHLLIDVTSEKQDTSR*RLQFES
Trigger: TGATTCGAATTGGAGTCTTCAGCGGCTTGTATCTTG...CTTCTCGGATGTTACGTCTATGAGCAAGTGAACAGGATTACCTGGGAGATAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000523933.5
3UTR-3UTR GCA 90 bp GTACAAAGTAGCGAGAAGCATCCAGGTCATAAAGGCCAACAAAGCAAACTCCACGCTAGTAATTGCTACTaGAGAAGTGCCATGATTTGC +
Preference number: 2 (lower is better)
Translates to: VQSSEKHPGHKGQQSKLHASNCY*RSAMIC
Trigger: GCAAATCATGGCACTTCTGCAGTAGCAATTACTAGC...GTGGAGTTTGCTTTGTTGGCCTTTATGACCTGGATGCTTCTCGCTACTTTGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000523933.5
3UTR-3UTR GCA 90 bp ACCACACTGCTTTTTGCTCGATGGCTTCACAACTCCATTTTCTTCCTGCAGCTAATCATGGCTAGTAATTaGTACTGCAGAAGTGCCATG +
Preference number: 2 (lower is better)
Translates to: TTLLFARWLHNSIFFLQLIMASN*YCRSAM
Trigger: CATGGCACTTCTGCAGTAGCAATTACTAGCCATGAT...TAGCTGCAGGAAGAAAATGGAGTTGTGAAGCCATCGAGCAAAAAGCAGTGTGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521195.1
3UTR-3UTR GCA 90 bp GCCATGATTTGCTGTAGCTCCTGTGCTGGTTCCCATGGATTTGGAAATGACCTTATTCTTACAAAACAGTaGATAGGTCACTTCCAGTGT +
Preference number: 2 (lower is better)
Translates to: AMICCSSCAGSHGFGNDLILTKQ*IGHFQC
Trigger: ACACTGGAAGTGACCTATGCACTGTTTTGTAAGAAT...AAGGTCATTTCCAAATCCATGGGAACCAGCACAGGAGCTACAGCAAATCATGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
3UTR-3UTR GCA 90 bp AGTAATTGCTACTGCAGAAGTGCCATGATTTGCTGTAGCTCCTGTGCTGGTTCCATTCTTACAAAACAGTaGATAGGTCACTTCCAGTGT +
Preference number: 2 (lower is better)
Translates to: SNCYCRSAMICCSSCAGSILTKQ*IGHFQC
Trigger: ACACTGGAAGTGACCTATGCACTGTTTTGTAAGAAT...GGAACCAGCACAGGAGCTACAGCAAATCATGGCACTTCTGCAGTAGCAATTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
3UTR-3UTR CCA 90 bp CGAGAGAAAATGTTCTTCAAGTATCTGAATGACAACCACCTCCCTGCTCTTTTCTGCCTGATAAGGACATaGGATATGGTACTGACGACA +
Preference number: 2 (lower is better)
Translates to: REKMFFKYLNDNHLPALFCLIRT*DMVLTT
Trigger: TGTCGTCAGTACCATATCCCATGTCCTTATCAGGCA...GAAAAGAGCAGGGAGGTGGTTGTCATTCAGATACTTGAAGAACATTTTCTCTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519011.5
ENST00000521195.1
3UTR-3UTR TCA 90 bp TCACACTTTTTAATGTTCAGCAAAATCCTAGTGAGCTGCCGAAATGAATTCTACGAGATGTGGAACCTTTaGGGCTGCTTGGTTCTGAAG +
Preference number: 2 (lower is better)
Translates to: SHFLMFSKILVSCRNEFYEMWNL*GCLVLK
Trigger: CTTCAGAACCAAGCAGCCTCAAAGGTTCCACATCTC...GTAGAATTCATTTCGGCAGCTCACTAGGATTTTGCTGAACATTAAAAAGTGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522484.5
3UTR-3UTR TCA 90 bp TGTAGTACTCTTCGACTTTCACTGATTGGATCTCTCTTGCGATTTCGTTTAAAACTCTTTTCTCACTCCTaGAACCGGGTGAACAAGCAG +
Preference number: 2 (lower is better)
Translates to: CSTLRLSLIGSLLRFRLKLFSHS*NRVNKQ
Trigger: CTGCTTGTTCACCCGGTTTCAGGAGTGAGAAAAGAG...TTTTAAACGAAATCGCAAGAGAGATCCAATCAGTGAAAGTCGAAGAGTACTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519011.5
ENST00000521195.1
3UTR-3UTR GCA 90 bp CGAGAGAAAATGTTCTTCAAGTATCTGAATGACAACCACCTCCCTGCTCTTTTCATCATGGCTAGTAATTaGTACTGCAGAAGTGCCATG +
Preference number: 2 (lower is better)
Translates to: REKMFFKYLNDNHLPALFIMASN*YCRSAM
Trigger: CATGGCACTTCTGCAGTAGCAATTACTAGCCATGAT...GAAAAGAGCAGGGAGGTGGTTGTCATTCAGATACTTGAAGAACATTTTCTCTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
3UTR-3UTR CCA 90 bp TGTGCCAGGCCAGTGTCAGTAATATCACTCTTTGGACTAATCCTTCCTTCACTCGTTTCTGGTGAGGTTTaGATTTCTGTCAAAGTTTCT +
Preference number: 2 (lower is better)
Translates to: CARPVSVISLFGLILPSLVSGEV*ISVKVS
Trigger: AGAAACTTTGACAGAAATCCAAACCTCACCAGAAAC...GAGTGAAGGAAGGATTAGTCCAAAGAGTGATATTACTGACACTGGCCTGGCACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
3UTR-3UTR CCA 90 bp GACCCAAGTTATCTCCCAGGTAATCCTGTTCACTTGCTCATAGACGTAACATCCTTCTTTAGTTTTTCTTaGTTCCGGCCATCATGTTGT +
Preference number: 2 (lower is better)
Translates to: DPSYLPGNPVHLLIDVTSFFSFS*FRPSCC
Trigger: ACAACATGATGGCCGGAACCAAGAAAAACTAAAGAA...GGATGTTACGTCTATGAGCAAGTGAACAGGATTACCTGGGAGATAACTTGGGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000523933.5
3UTR-3UTR CCA 90 bp ATGATTTGCTGTAGCTCCTGTGCTGGTTCCCATGGATTTGGAAATGACCTTCAGAAGTTTACGACAAGGTaGAACCACATGAATTTGTTC +
Preference number: 2 (lower is better)
Translates to: MICCSSCAGSHGFGNDLQKFTTR*NHMNLF
Trigger: GAACAAATTCATGTGGTTCCACCTTGTCGTAAACTT...CTGAAGGTCATTTCCAAATCCATGGGAACCAGCACAGGAGCTACAGCAAATCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521195.1
3UTR-3UTR CCA 90 bp ATGATTTGCTGTAGCTCCTGTGCTGGTTCCCATGGATTTGGAAATGACCTTCAGAGTAATATCACTCTTTaGACTAATCCTTCCTTCACT +
Preference number: 2 (lower is better)
Translates to: MICCSSCAGSHGFGNDLQSNITL*TNPSFT
Trigger: AGTGAAGGAAGGATTAGTCCAAAGAGTGATATTACT...CTGAAGGTCATTTCCAAATCCATGGGAACCAGCACAGGAGCTACAGCAAATCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
3UTR-3UTR CCA 90 bp TGTAGTACTCTTCGACTTTCACTGATTGGATCTCTCTTGCGATTTCGTTTAAAACACACAAAGGCACAGTaGCAAGAGTACAAAGTAGCG +
Preference number: 2 (lower is better)
Translates to: CSTLRLSLIGSLLRFRLKHTKAQ*QEYKVA
Trigger: CGCTACTTTGTACTCTTGCCACTGTGCCTTTGTGTG...TTTTAAACGAAATCGCAAGAGAGATCCAATCAGTGAAAGTCGAAGAGTACTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000523933.5
3UTR-3UTR CCA 90 bp AGTTATCTCCCAGGTAATCCTGTTCACTTGCTCATAGACGTAACATCCGAGAAGTTCTTTAGTTTTTCTTaGTTCCGGCCATCATGTTGT +
Preference number: 2 (lower is better)
Translates to: SYLPGNPVHLLIDVTSEKFFSFS*FRPSCC
Trigger: ACAACATGATGGCCGGAACCAAGAAAAACTAAAGAA...CTTCTCGGATGTTACGTCTATGAGCAAGTGAACAGGATTACCTGGGAGATAACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000523933.5
3UTR-3UTR CCA 90 bp TGGTCGAGCTTTTGCTTTTGCCTGATAAGGACATGGGATATGGTACTGACGACAAAGAAATTCTGTGTGTaGATCAAAAGTTACAGGAAC +
Preference number: 2 (lower is better)
Translates to: WSSFCFCLIRTWDMVLTTKKFCV*IKSYRN
Trigger: GTTCCTGTAACTTTTGATCCACACACAGAATTTCTT...TGTCGTCAGTACCATATCCCATGTCCTTATCAGGCAAAAGCAAAAGCTCGACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000521195.1
3UTR-3UTR TCA 90 bp AAACAGTGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGAGTAACGAGATAGTGGACACTCTTTaGGTAAGCACCTTATTTCAG +
Preference number: 2 (lower is better)
Translates to: KQCIGHFQCNTNLLLSNEIVDTL*VSTLFQ
Trigger: CTGAAATAAGGTGCTTACTCAAAGAGTGTCCACTAT...CTCGTTACTCAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCACTGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358755.5
ENST00000522484.5
ENST00000522566.5
3UTR-3UTR CCA 90 bp TGTAGTACTCTTCGACTTTCACTGATTGGATCTCTCTTGCGATTTCGTTTAAAATTGGTTCTGAAGAACTaGGGACCTGCAAATTGTTGC +
Preference number: 2 (lower is better)
Translates to: CSTLRLSLIGSLLRFRLKLVLKN*GPANCC
Trigger: GCAACAATTTGCAGGTCCCCAGTTCTTCAGAACCAA...TTTTAAACGAAATCGCAAGAGAGATCCAATCAGTGAAAGTCGAAGAGTACTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519011.5
ENST00000521195.1
3UTR-3UTR CCA 90 bp CGAGAGAAAATGTTCTTCAAGTATCTGAATGACAACCACCTCCCTGCTCTTTTCGAAGTCAATTGCACTTaGCCTAATATACAAAAGACT +
Preference number: 2 (lower is better)
Translates to: REKMFFKYLNDNHLPALFEVNCT*PNIQKT
Trigger: AGTCTTTTGTATATTAGGCCAAGTGCAATTGACTTC...GAAAAGAGCAGGGAGGTGGTTGTCATTCAGATACTTGAAGAACATTTTCTCTCG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000522484.5
3UTR-3UTR CCA 90 bp AAACAGTGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGAGTAACGAGGTTTCTGGTGAGGTTTaGATTTCTGTCAAAGTTTCT +
Preference number: 2 (lower is better)
Translates to: KQCIGHFQCNTNLLLSNEVSGEV*ISVKVS
Trigger: AGAAACTTTGACAGAAATCCAAACCTCACCAGAAAC...CTCGTTACTCAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCACTGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
3UTR-3UTR GCA 90 bp TGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGAGTAACGAGAGAAAAATTCTTACAAAACAGTaGATAGGTCACTTCCAGTGT +
Preference number: 2 (lower is better)
Translates to: CIGHFQCNTNLLLSNERKILTKQ*IGHFQC
Trigger: ACACTGGAAGTGACCTATGCACTGTTTTGTAAGAAT...TTTTCTCTCGTTACTCAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
3UTR-3UTR GCA 90 bp AAACAGTGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGAGTAACGAGAAAAGGGAAGTCAATTaGACTTGGCCTAATATACAA +
Preference number: 2 (lower is better)
Translates to: KQCIGHFQCNTNLLLSNEKREVN*TWPNIQ
Trigger: TTGTATATTAGGCCAAGTGCAATTGACTTCCCTTTT...CTCGTTACTCAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCACTGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358755.5
ENST00000522484.5
ENST00000522566.5
3UTR-3UTR GCA 90 bp AAACAGTGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGAGTAACGAGAAAATCCTAGTGAGCTaGCGAAATGAATTCTACAAA +
Preference number: 2 (lower is better)
Translates to: KQCIGHFQCNTNLLLSNEKILVS*RNEFYK
Trigger: TTTGTAGAATTCATTTCGGCAGCTCACTAGGATTTT...CTCGTTACTCAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCACTGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358755.5
ENST00000522484.5
ENST00000522566.5
3UTR-3UTR CCA 90 bp AAACAGTGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGAGTAACGAGAGTAATATCACTCTTTaGACTAATCCTTCCTTCACT +
Preference number: 2 (lower is better)
Translates to: KQCIGHFQCNTNLLLSNESNITL*TNPSFT
Trigger: AGTGAAGGAAGGATTAGTCCAAAGAGTGATATTACT...CTCGTTACTCAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCACTGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
3UTR-3UTR TCA 90 bp CACTTTTTAATGTTCAGCAAAATCCTAGTGAGCTGCCGAAATGAATTCTACAAAATAGTGGACACTCTTTaGGTAAGCACCTTATTTCAG +
Preference number: 2 (lower is better)
Translates to: HFLMFSKILVSCRNEFYKIVDTL*VSTLFQ
Trigger: CTGAAATAAGGTGCTTACTCAAAGAGTGTCCACTAT...TTTGTAGAATTCATTTCGGCAGCTCACTAGGATTTTGCTGAACATTAAAAAGTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358755.5
ENST00000522484.5
ENST00000522566.5
3UTR-3UTR GCA 90 bp TGTAGTACTCTTCGACTTTCACTGATTGGATCTCTCTTGCGATTTCGTTTAAAAATTCTTACAAAACAGTaGATAGGTCACTTCCAGTGT +
Preference number: 2 (lower is better)
Translates to: CSTLRLSLIGSLLRFRLKILTKQ*IGHFQC
Trigger: ACACTGGAAGTGACCTATGCACTGTTTTGTAAGAAT...TTTTAAACGAAATCGCAAGAGAGATCCAATCAGTGAAAGTCGAAGAGTACTACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000519011.5
ENST00000521195.1
3UTR-3UTR GCA 90 bp TGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGAGTAACGAGAGAAAAAAAATCCTAGTGAGCTaGCGAAATGAATTCTACAAA +
Preference number: 2 (lower is better)
Translates to: CIGHFQCNTNLLLSNERKKILVS*RNEFYK
Trigger: TTTGTAGAATTCATTTCGGCAGCTCACTAGGATTTT...TTTTCTCTCGTTACTCAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCA
37% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358755.5
ENST00000522484.5
ENST00000522566.5
3UTR-3UTR GCA 90 bp TGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGAGTAACGAGAGAAAATTGGTACAAATGCTTTaGAGAGGAAAGTTTCAATGT +
Preference number: 2 (lower is better)
Translates to: CIGHFQCNTNLLLSNERKLVQML*RGKFQC
Trigger: ACATTGAAACTTTCCTCTGCAAAGCATTTGTACCAA...TTTTCTCTCGTTACTCAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521195.1
3UTR-3UTR CCA 90 bp TGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGAGTAACGAGAGAAAAGAAGTCAATTGCACTTaGCCTAATATACAAAAGACT +
Preference number: 2 (lower is better)
Translates to: CIGHFQCNTNLLLSNERKEVNCT*PNIQKT
Trigger: AGTCTTTTGTATATTAGGCCAAGTGCAATTGACTTC...TTTTCTCTCGTTACTCAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358755.5
ENST00000522484.5
ENST00000522566.5
3UTR-3UTR GCA 90 bp CACTTTTTAATGTTCAGCAAAATCCTAGTGAGCTGCCGAAATGAATTCTACAAAATTCTTACAAAACAGTaGATAGGTCACTTCCAGTGT +
Preference number: 2 (lower is better)
Translates to: HFLMFSKILVSCRNEFYKILTKQ*IGHFQC
Trigger: ACACTGGAAGTGACCTATGCACTGTTTTGTAAGAAT...TTTGTAGAATTCATTTCGGCAGCTCACTAGGATTTTGCTGAACATTAAAAAGTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000358755.5
ENST00000522484.5
ENST00000522566.5
3UTR-3UTR GCA 90 bp CACTTTTTAATGTTCAGCAAAATCCTAGTGAGCTGCCGAAATGAATTCTACAAAAAAAGGGAAGTCAATTaGACTTGGCCTAATATACAA +
Preference number: 2 (lower is better)
Translates to: HFLMFSKILVSCRNEFYKKREVN*TWPNIQ
Trigger: TTGTATATTAGGCCAAGTGCAATTGACTTCCCTTTT...TTTGTAGAATTCATTTCGGCAGCTCACTAGGATTTTGCTGAACATTAAAAAGTG
34% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000358755.5
ENST00000522484.5
ENST00000522566.5
3UTR-3UTR CCA 90 bp CACTTTTTAATGTTCAGCAAAATCCTAGTGAGCTGCCGAAATGAATTCTACAAAGAAGTCAATTGCACTTaGCCTAATATACAAAAGACT +
Preference number: 2 (lower is better)
Translates to: HFLMFSKILVSCRNEFYKEVNCT*PNIQKT
Trigger: AGTCTTTTGTATATTAGGCCAAGTGCAATTGACTTC...TTTGTAGAATTCATTTCGGCAGCTCACTAGGATTTTGCTGAACATTAAAAAGTG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358755.5
ENST00000522484.5
ENST00000522566.5
3UTR CCA 72 bp CCTGGCCCTTCCCGTCGACCTGTTCCCCAGAGAGTCTaGAGATGGATGCTGCTGGCGAGGCAGGTTCACCAC +
Preference number: 3 (lower is better)
Translates to: PGPSRRPVPQRV*RWMLLARQVHH
Trigger: GTGGTGAACCTGCCTCGCCAGCAGCATCCATCTCCAGACTCTCTGGGGAACAGGTCGACGGGAAGGGCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
3UTR GCA 72 bp CCTTCCTTCACTCCGCGCACTTTCAGATACACTGCCTaGCTGGCCCTTCCCGTCGACCTGTTCCCCAGAGAG +
Preference number: 3 (lower is better)
Translates to: PSFTPRTFRYTA*LALPVDLFPRE
Trigger: CTCTCTGGGGAACAGGTCGACGGGAAGGGCCAGGCAGGCAGTGTATCTGAAAGTGCGCGGAGTGAAGGAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
3UTR CCA 72 bp CCTTCCCGTCGACCTGTTCCCCAGAGAGTCTGGAGATaGATGCTGCTGGCGAGGCAGGTTCACCACAGTCCT +
Preference number: 3 (lower is better)
Translates to: PSRRPVPQRVWR*MLLARQVHHSP
Trigger: AGGACTGTGGTGAACCTGCCTCGCCAGCAGCATCCATCTCCAGACTCTCTGGGGAACAGGTCGACGGGAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
3UTR-3UTR CAA 90 bp ATGCTGCTGGCGAGGCAGGTTCACCACAGTCCTGTTCTCTTAACCTGGGGGTGCGGGACCTGCAAATTGTaGCTCTGTGCCAGGCCAGTG +
Preference number: 3 (lower is better)
Translates to: MLLARQVHHSPVLLTWGCGTCKL*LCARPV
Trigger: CACTGGCCTGGCACAGAGCAACAATTTGCAGGTCCC...GCACCCCCAGGTTAAGAGAACAGGACTGTGGTGAACCTGCCTCGCCAGCAGCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
3UTR GCA 72 bp GTCGACCTGTTCCCCAGAGAGTCTGGAGATGGATGCTaGTGGCGAGGCAGGTTCACCACAGTCCTGTTCTCT +
Preference number: 3 (lower is better)
Translates to: VDLFPRESGDGC*WRGRFTTVLFS
Trigger: AGAGAACAGGACTGTGGTGAACCTGCCTCGCCAGCAGCATCCATCTCCAGACTCTCTGGGGAACAGGTCGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
3UTR-3UTR CAA 90 bp ATGCTGCTGGCGAGGCAGGTTCACCACAGTCCTGTTCTCTTAACCTGGGGGTGCAGAGATGTGGAACCTTaGAGGCTGCTTGGTTCTGAA +
Preference number: 3 (lower is better)
Translates to: MLLARQVHHSPVLLTWGCRDVEP*RLLGSE
Trigger: TTCAGAACCAAGCAGCCTCAAAGGTTCCACATCTCT...GCACCCCCAGGTTAAGAGAACAGGACTGTGGTGAACCTGCCTCGCCAGCAGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
3UTR-3UTR CAA 90 bp ATGCTGCTGGCGAGGCAGGTTCACCACAGTCCTGTTCTCTTAACCTGGGGGTGCGTCGAGCTTTTGCTTTaGCCTGATAAGGACATGGGA +
Preference number: 3 (lower is better)
Translates to: MLLARQVHHSPVLLTWGCVELLL*PDKDMG
Trigger: TCCCATGTCCTTATCAGGCAAAAGCAAAAGCTCGAC...GCACCCCCAGGTTAAGAGAACAGGACTGTGGTGAACCTGCCTCGCCAGCAGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000519011.5
ENST00000521195.1
3UTR TCA 72 bp CTGAAACCGGGTGAACAAGCAGAGATGTGGAACCTTTaGGGCTGCTTGGTTCTGAAGAACTGGGGACCTGCA +
Preference number: 3 (lower is better)
Translates to: LKPGEQAEMWNL*GCLVLKNWGPA
Trigger: TGCAGGTCCCCAGTTCTTCAGAACCAAGCAGCCTCAAAGGTTCCACATCTCTGCTTGTTCACCCGGTTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
3UTR-3UTR CAA 90 bp TGGACTAATCCTTCCTTCACTCCGCGCACTTTCAGATACACTGCCTGCCTGGCCCTGGTTCCCATGGATTaGGAAATGACCTTCAGCTTG +
Preference number: 3 (lower is better)
Translates to: WTNPSFTPRTFRYTACLALVPMD*EMTFSL
Trigger: CAAGCTGAAGGTCATTTCCAAATCCATGGGAACCAG...GGCCAGGCAGGCAGTGTATCTGAAAGTGCGCGGAGTGAAGGAAGGATTAGTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
3UTR-3UTR CAA 90 bp GCCATGATTTGCTGTAGCTCCTGTGCTGGTTCCCATGGATTTGGAAATGACCTTCTGGGGACCTGCAAATaGTTGCTCTGTGCCAGGCCA +
Preference number: 3 (lower is better)
Translates to: AMICCSSCAGSHGFGNDLLGTCK*LLCARP
Trigger: TGGCCTGGCACAGAGCAACAATTTGCAGGTCCCCAG...AAGGTCATTTCCAAATCCATGGGAACCAGCACAGGAGCTACAGCAAATCATGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
3UTR-3UTR CAA 90 bp AGTCTGGAGATGGATGCTGCTGGCGAGGCAGGTTCACCACAGTCCTGTTCTCTTCTTTCACCTCTCTCATaGATGTTTCTGGTGAGGTTT +
Preference number: 3 (lower is better)
Translates to: SLEMDAAGEAGSPQSCSLLSPLS*MFLVRF
Trigger: AAACCTCACCAGAAACATCAATGAGAGAGGTGAAAG...AAGAGAACAGGACTGTGGTGAACCTGCCTCGCCAGCAGCATCCATCTCCAGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
3UTR-3UTR CAA 90 bp AGAGTCTGGAGATGGATGCTGCTGGCGAGGCAGGTTCACCACAGTCCTGTTCTCCAAACTCCACTAATGTaGTCTCCTTCAACTTTGTTC +
Preference number: 3 (lower is better)
Translates to: RVWRWMLLARQVHHSPVLQTPLM*SPSTLF
Trigger: GAACAAAGTTGAAGGAGACAACATTAGTGGAGTTTG...GAGAACAGGACTGTGGTGAACCTGCCTCGCCAGCAGCATCCATCTCCAGACTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519011.5
ENST00000521195.1
3UTR-3UTR CAA 90 bp TGTTCTCTTAACCTGGGGGTGCTAGCTCCGTCCGCTTTCACCTCTCTCATTGATGTTCCGGCCATCATGTaGTATGACTTGTCGAACATG +
Preference number: 3 (lower is better)
Translates to: CSLNLGVLAPSAFTSLIDVPAIM*YDLSNM
Trigger: CATGTTCGACAAGTCATACAACATGATGGCCGGAAC...ATCAATGAGAGAGGTGAAAGCGGACGGAGCTAGCACCCCCAGGTTAAGAGAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000523933.5
3UTR-3UTR CAA 90 bp TGGACTAATCCTTCCTTCACTCCGCGCACTTTCAGATACACTGCCTGCCTGGCCCAGTGTAACACAAATTaGCTTCTGAGTAACGAGAGA +
Preference number: 3 (lower is better)
Translates to: WTNPSFTPRTFRYTACLAQCNTN*LLSNER
Trigger: TCTCTCGTTACTCAGAAGCAAATTTGTGTTACACTG...GGCCAGGCAGGCAGTGTATCTGAAAGTGCGCGGAGTGAAGGAAGGATTAGTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
3UTR-3UTR CAA 90 bp CTAGCTCCGTCCGCTTTCACCTCTCTCATTGATGTTTCTGGTGAGGTTTGGATTCTGGTTCCCATGGATTaGGAAATGACCTTCAGCTTG +
Preference number: 3 (lower is better)
Translates to: LAPSAFTSLIDVSGEVWILVPMD*EMTFSL
Trigger: CAAGCTGAAGGTCATTTCCAAATCCATGGGAACCAG...AATCCAAACCTCACCAGAAACATCAATGAGAGAGGTGAAAGCGGACGGAGCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000523933.5
3UTR-3UTR CAA 90 bp AAACACACAAAGGCACAGTGGCAAGAGTACAAAGTAGCGAGAAGCATCCAGGTCCTGGTTCCCATGGATTaGGAAATGACCTTCAGCTTG +
Preference number: 3 (lower is better)
Translates to: KHTKAQWQEYKVARSIQVLVPMD*EMTFSL
Trigger: CAAGCTGAAGGTCATTTCCAAATCCATGGGAACCAG...GACCTGGATGCTTCTCGCTACTTTGTACTCTTGCCACTGTGCCTTTGTGTGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000523933.5
3UTR-3UTR CAA 90 bp CTAGCTCCGTCCGCTTTCACCTCTCTCATTGATGTTTCTGGTGAGGTTTGGATTAGAGATGTGGAACCTTaGAGGCTGCTTGGTTCTGAA +
Preference number: 3 (lower is better)
Translates to: LAPSAFTSLIDVSGEVWIRDVEP*RLLGSE
Trigger: TTCAGAACCAAGCAGCCTCAAAGGTTCCACATCTCT...AATCCAAACCTCACCAGAAACATCAATGAGAGAGGTGAAAGCGGACGGAGCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
3UTR-3UTR CAA 90 bp GCCATGATTTGCTGTAGCTCCTGTGCTGGTTCCCATGGATTTGGAAATGACCTTGTCGAGCTTTTGCTTTaGCCTGATAAGGACATGGGA +
Preference number: 3 (lower is better)
Translates to: AMICCSSCAGSHGFGNDLVELLL*PDKDMG
Trigger: TCCCATGTCCTTATCAGGCAAAAGCAAAAGCTCGAC...AAGGTCATTTCCAAATCCATGGGAACCAGCACAGGAGCTACAGCAAATCATGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000523933.5
3UTR-3UTR CAA 90 bp TGTTCTCTTAACCTGGGGGTGCTAGCTCCGTCCGCTTTCACCTCTCTCATTGATCAGTGTAACACAAATTaGCTTCTGAGTAACGAGAGA +
Preference number: 3 (lower is better)
Translates to: CSLNLGVLAPSAFTSLIDQCNTN*LLSNER
Trigger: TCTCTCGTTACTCAGAAGCAAATTTGTGTTACACTG...ATCAATGAGAGAGGTGAAAGCGGACGGAGCTAGCACCCCCAGGTTAAGAGAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
3UTR-3UTR CAA 90 bp TCCCCCAGAAGTCTTAAGATGCCTTGGACACCAAAATCCAATGTCTCTTTGGACGTTCCGGCCATCATGTaGTATGACTTGTCGAACATG +
Preference number: 3 (lower is better)
Translates to: SPRSLKMPWTPKSNVSLDVPAIM*YDLSNM
Trigger: CATGTTCGACAAGTCATACAACATGATGGCCGGAAC...GTCCAAAGAGACATTGGATTTTGGTGTCCAAGGCATCTTAAGACTTCTGGGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521195.1
3UTR-3UTR CAA 90 bp CACAAAGGCACAGTGGCAAGAGTACAAAGTAGCGAGAAGCATCCAGGTCATAAAGTTCCGGCCATCATGTaGTATGACTTGTCGAACATG +
Preference number: 3 (lower is better)
Translates to: HKGTVARVQSSEKHPGHKVPAIM*YDLSNM
Trigger: CATGTTCGACAAGTCATACAACATGATGGCCGGAAC...TTTATGACCTGGATGCTTCTCGCTACTTTGTACTCTTGCCACTGTGCCTTTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000523933.5
3UTR-3UTR CAA 90 bp AAACACACAAAGGCACAGTGGCAAGAGTACAAAGTAGCGAGAAGCATCCAGGTCGGTAATCCTGTTCACTaGCTCATAGACGTAACATCC +
Preference number: 3 (lower is better)
Translates to: KHTKAQWQEYKVARSIQVGNPVH*LIDVTS
Trigger: GGATGTTACGTCTATGAGCAAGTGAACAGGATTACC...GACCTGGATGCTTCTCGCTACTTTGTACTCTTGCCACTGTGCCTTTGTGTGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000523933.5
3UTR-3UTR CAA 90 bp CTAGCTCCGTCCGCTTTCACCTCTCTCATTGATGTTTCTGGTGAGGTTTGGATTATTCTGGTCGAGCTTTaGCTTTTGCCTGATAAGGAC +
Preference number: 3 (lower is better)
Translates to: LAPSAFTSLIDVSGEVWIILVEL*LLPDKD
Trigger: GTCCTTATCAGGCAAAAGCAAAAGCTCGACCAGAAT...AATCCAAACCTCACCAGAAACATCAATGAGAGAGGTGAAAGCGGACGGAGCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000523933.5
3UTR-3UTR CAA 90 bp GCCATGATTTGCTGTAGCTCCTGTGCTGGTTCCCATGGATTTGGAAATGACCTTATTCTGGTCGAGCTTTaGCTTTTGCCTGATAAGGAC +
Preference number: 3 (lower is better)
Translates to: AMICCSSCAGSHGFGNDLILVEL*LLPDKD
Trigger: GTCCTTATCAGGCAAAAGCAAAAGCTCGACCAGAAT...AAGGTCATTTCCAAATCCATGGGAACCAGCACAGGAGCTACAGCAAATCATGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000523933.5
3UTR GCA 72 bp ATGGCTAGTAATTGCTACTGCAGAAGTGCCATGATTTaGTGTAGCTCCTGTGCTGGTTCCCATGGATTTGGA +
Preference number: 3 (lower is better)
Translates to: MASNCYCRSAMI*CSSCAGSHGFG
Trigger: TCCAAATCCATGGGAACCAGCACAGGAGCTACAGCAAATCATGGCACTTCTGCAGTAGCAATTACTAGCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000523933.5
3UTR-3UTR CAA 90 bp TGTTCTCTTAACCTGGGGGTGCTAGCTCCGTCCGCTTTCACCTCTCTCATTGATTTGTCTCCTTCAACTTaGTTCATAGCAAGAAGCATA +
Preference number: 3 (lower is better)
Translates to: CSLNLGVLAPSAFTSLIDLSPST*FIARSI
Trigger: TATGCTTCTTGCTATGAACAAAGTTGAAGGAGACAA...ATCAATGAGAGAGGTGAAAGCGGACGGAGCTAGCACCCCCAGGTTAAGAGAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000523933.5
3UTR GCA 72 bp AAGAAGCATAACAGTCAGGAAACCTGGTGTTCCCCATaGAACAGCATGAAACCACACTGCTTTTTGCTCGAT +
Preference number: 3 (lower is better)
Translates to: KKHNSQETWCSP*NSMKPHCFLLD
Trigger: ATCGAGCAAAAAGCAGTGTGGTTTCATGCTGTTGCATGGGGAACACCAGGTTTCCTGACTGTTATGCTTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000523933.5
3UTR CCA 72 bp TTTGTTCATAGCAAGAAGCATAACAGTCAGGAAACCTaGTGTTCCCCATGCAACAGCATGAAACCACACTGC +
Preference number: 3 (lower is better)
Translates to: FVHSKKHNSQET*CSPCNSMKPHC
Trigger: GCAGTGTGGTTTCATGCTGTTGCATGGGGAACACCAGGTTTCCTGACTGTTATGCTTCTTGCTATGAACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000523933.5
3UTR-3UTR CAA 90 bp GAGCTTTTGCTTTTGCCTGATAAGGACATGGGATATGGTACTGACGACAATGATCTGGTTCCCATGGATTaGGAAATGACCTTCAGCTTG +
Preference number: 3 (lower is better)
Translates to: ELLLLPDKDMGYGTDDNDLVPMD*EMTFSL
Trigger: CAAGCTGAAGGTCATTTCCAAATCCATGGGAACCAG...ATCATTGTCGTCAGTACCATATCCCATGTCCTTATCAGGCAAAAGCAAAAGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000523933.5
3UTR-3UTR CAA 90 bp TGGTCGAGCTTTTGCTTTTGCCTGATAAGGACATGGGATATGGTACTGACGACACTTTCACCTCTCTCATaGATGTTTCTGGTGAGGTTT +
Preference number: 3 (lower is better)
Translates to: WSSFCFCLIRTWDMVLTTLSPLS*MFLVRF
Trigger: AAACCTCACCAGAAACATCAATGAGAGAGGTGAAAG...TGTCGTCAGTACCATATCCCATGTCCTTATCAGGCAAAAGCAAAAGCTCGACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000523933.5
3UTR CCA 72 bp ATGCAACAGCATGAAACCACACTGCTTTTTGCTCGATaGCTTCACAACTCCATTTTCTTCCTGCAGCTAAGA +
Preference number: 3 (lower is better)
Translates to: MQQHETTLLFAR*LHNSIFFLQLR
Trigger: TCTTAGCTGCAGGAAGAAAATGGAGTTGTGAAGCCATCGAGCAAAAAGCAGTGTGGTTTCATGCTGTTGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521195.1
3UTR-3UTR CAA 90 bp TTGCCTGATAAGGACATGGGATATGGTACTGACGACAATGATCAGAGACCCAAGCAAACTCCACTAATGTaGTCTCCTTCAACTTTGTTC +
Preference number: 3 (lower is better)
Translates to: LPDKDMGYGTDDNDQRPKQTPLM*SPSTLF
Trigger: GAACAAAGTTGAAGGAGACAACATTAGTGGAGTTTG...CTTGGGTCTCTGATCATTGTCGTCAGTACCATATCCCATGTCCTTATCAGGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000523933.5
3UTR-3UTR CAA 90 bp CACAAAGGCACAGTGGCAAGAGTACAAAGTAGCGAGAAGCATCCAGGTCATAAACAAACTCCACTAATGTaGTCTCCTTCAACTTTGTTC +
Preference number: 3 (lower is better)
Translates to: HKGTVARVQSSEKHPGHKQTPLM*SPSTLF
Trigger: GAACAAAGTTGAAGGAGACAACATTAGTGGAGTTTG...TTTATGACCTGGATGCTTCTCGCTACTTTGTACTCTTGCCACTGTGCCTTTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000523933.5
3UTR TCA 72 bp CTTCTGAGTAACGAGAGAAAATGTTCTTCAAGTATCTaGATGACAACCACCTCCCTGCTCTTTTCTCACTCC +
Preference number: 3 (lower is better)
Translates to: LLSNERKCSSSI*MTTTSLLFSHS
Trigger: GGAGTGAGAAAAGAGCAGGGAGGTGGTTGTCATTCAGATACTTGAAGAACATTTTCTCTCGTTACTCAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
3UTR-3UTR CAA 90 bp CGAGAGAAAATGTTCTTCAAGTATCTGAATGACAACCACCTCCCTGCTCTTTTCCTTTCACCTCTCTCATaGATGTTTCTGGTGAGGTTT +
Preference number: 3 (lower is better)
Translates to: REKMFFKYLNDNHLPALFLSPLS*MFLVRF
Trigger: AAACCTCACCAGAAACATCAATGAGAGAGGTGAAAG...GAAAAGAGCAGGGAGGTGGTTGTCATTCAGATACTTGAAGAACATTTTCTCTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
3UTR-3UTR CAA 90 bp AAACAGTGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGAGTAACGAGATTCTGGTCGAGCTTTaGCTTTTGCCTGATAAGGAC +
Preference number: 3 (lower is better)
Translates to: KQCIGHFQCNTNLLLSNEILVEL*LLPDKD
Trigger: GTCCTTATCAGGCAAAAGCAAAAGCTCGACCAGAAT...CTCGTTACTCAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCACTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519011.5
ENST00000521195.1
3UTR-3UTR CAA 90 bp TGTAGTACTCTTCGACTTTCACTGATTGGATCTCTCTTGCGATTTCGTTTAAAAGTCGAGCTTTTGCTTTaGCCTGATAAGGACATGGGA +
Preference number: 3 (lower is better)
Translates to: CSTLRLSLIGSLLRFRLKVELLL*PDKDMG
Trigger: TCCCATGTCCTTATCAGGCAAAAGCAAAAGCTCGAC...TTTTAAACGAAATCGCAAGAGAGATCCAATCAGTGAAAGTCGAAGAGTACTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000523933.5
3UTR-3UTR CAA 90 bp TGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGAGTAACGAGAGAAAACAGTGTAACACAAATTaGCTTCTGAGTAACGAGAGA +
Preference number: 3 (lower is better)
Translates to: CIGHFQCNTNLLLSNERKQCNTN*LLSNER
Trigger: TCTCTCGTTACTCAGAAGCAAATTTGTGTTACACTG...TTTTCTCTCGTTACTCAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
3UTR-3UTR CAA 90 bp GCACTAATATCGCTATCACACTTTTTAATGTTCAGCAAAATCCTAGTGAGCTGCCAGTGTAACACAAATTaGCTTCTGAGTAACGAGAGA +
Preference number: 3 (lower is better)
Translates to: ALISLSHFLMFSKILVSCQCNTN*LLSNER
Trigger: TCTCTCGTTACTCAGAAGCAAATTTGTGTTACACTG...GCAGCTCACTAGGATTTTGCTGAACATTAAAAAGTGTGATAGCGATATTAGTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358755.5
ENST00000522484.5
ENST00000522566.5
3UTR CCA 72 bp ATCAGAATATACTTTCTCACAAAGTTTACGACAAGGTaGAACCACATGAATTTGTTCTATGCAGGTTGGTAC +
Preference number: 3 (lower is better)
Translates to: IRIYFLTKFTTR*NHMNLFYAGWY
Trigger: GTACCAACCTGCATAGAACAAATTCATGTGGTTCCACCTTGTCGTAAACTTTGTGAGAAAGTATATTCTGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521195.1
3UTR-3UTR CAA 90 bp CACTTTTTAATGTTCAGCAAAATCCTAGTGAGCTGCCGAAATGAATTCTACAAACAGTGTAACACAAATTaGCTTCTGAGTAACGAGAGA +
Preference number: 3 (lower is better)
Translates to: HFLMFSKILVSCRNEFYKQCNTN*LLSNER
Trigger: TCTCTCGTTACTCAGAAGCAAATTTGTGTTACACTG...TTTGTAGAATTCATTTCGGCAGCTCACTAGGATTTTGCTGAACATTAAAAAGTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358755.5
ENST00000522484.5
ENST00000522566.5
3UTR-3UTR CAA 90 bp TGTAGTACTCTTCGACTTTCACTGATTGGATCTCTCTTGCGATTTCGTTTAAAAGGAAAGTTTCAATGTTaGGTGAACATTCCAGATTTG +
Preference number: 3 (lower is better)
Translates to: CSTLRLSLIGSLLRFRLKGKFQC*VNIPDL
Trigger: CAAATCTGGAATGTTCACCAAACATTGAAACTTTCC...TTTTAAACGAAATCGCAAGAGAGATCCAATCAGTGAAAGTCGAAGAGTACTACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521195.1
3UTR-3UTR CAA 90 bp CACTTTTTAATGTTCAGCAAAATCCTAGTGAGCTGCCGAAATGAATTCTACAAAAATAGTGGACACTCTTaGAGTAAGCACCTTATTTCA +
Preference number: 3 (lower is better)
Translates to: HFLMFSKILVSCRNEFYKNSGHS*SKHLIS
Trigger: TGAAATAAGGTGCTTACTCAAAGAGTGTCCACTATT...TTTGTAGAATTCATTTCGGCAGCTCACTAGGATTTTGCTGAACATTAAAAAGTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000358755.5
ENST00000522484.5
ENST00000522566.5
CDS-3UTR GCA 90 bp TGGACTAATCCTTCCTTCACTCCGCGCACTTTCAGATACACTGCCTGCCTGGCCAGACGGCTCCGGGGTTaGGTCCGGGACTGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: WTNPSFTPRTFRYTACLARRLRG*VRDWSC
Trigger: GCAGCTCCAGTCCCGGACGCAACCCCGGAGCCGTCT...GGCCAGGCAGGCAGTGTATCTGAAAGTGCGCGGAGTGAAGGAAGGATTAGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519011.5
ENST00000522484.5
CDS-3UTR GCA 90 bp GCACAGTGGCAAGAGTACAAAGTAGCGAGAAGCATCCAGGTCATAAAGGCCAACGTCCGGGACTGGAGCTaGCTCGAGAGCCGCACGGGG +
Preference number: 4 (lower is better)
Translates to: AQWQEYKVARSIQVIKANVRDWS*LESRTG
Trigger: CCCCGTGCGGCTCTCGAGGCAGCTCCAGTCCCGGAC...GTTGGCCTTTATGACCTGGATGCTTCTCGCTACTTTGTACTCTTGCCACTGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523933.5
CDS-3UTR CCA 90 bp ATGCTGCTGGCGAGGCAGGTTCACCACAGTCCTGTTCTCTTAACCTGGGGGTGCGGAGATGGATGCTGCTaGCGAGGCAGGTTCACCACA +
Preference number: 4 (lower is better)
Translates to: MLLARQVHHSPVLLTWGCGDGCC*RGRFTT
Trigger: TGTGGTGAACCTGCCTCGCCAGCAGCATCCATCTCC...GCACCCCCAGGTTAAGAGAACAGGACTGTGGTGAACCTGCCTCGCCAGCAGCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
CDS-3UTR CCA 90 bp ACCTGGTGTTCCCCATGCAACAGCATGAAACCACACTGCTTTTTGCTCGATGGCGGTTGCGTCCGGGACTaGAGCTGCCTCGAGAGCCGC +
Preference number: 4 (lower is better)
Translates to: TWCSPCNSMKPHCFLLDGGCVRD*SCLESR
Trigger: GCGGCTCTCGAGGCAGCTCCAGTCCCGGACGCAACC...GCCATCGAGCAAAAAGCAGTGTGGTTTCATGCTGTTGCATGGGGAACACCAGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000519011.5
ENST00000523933.5
CDS-3UTR TCA 90 bp CCTGGCCCTTCCCGTCGACCTGTTCCCCAGAGAGTCTGGAGATGGATGCTGCTGCTCTTTTCTCACTCCTaGAACCGGGTGAACAAGCAG +
Preference number: 4 (lower is better)
Translates to: PGPSRRPVPQRVWRWMLLLFSHS*NRVNKQ
Trigger: CTGCTTGTTCACCCGGTTTCAGGAGTGAGAAAAGAG...CAGCAGCATCCATCTCCAGACTCTCTGGGGAACAGGTCGACGGGAAGGGCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
CDS-3UTR TCA 90 bp CCGTCGACCTGTTCCCCAGAGAGTCTGGAGATGGATGCTGCTGGCGAGGCAGGTCTCTTTTCTCACTCCTaGAACCGGGTGAACAAGCAG +
Preference number: 4 (lower is better)
Translates to: PSTCSPESLEMDAAGEAGLFSHS*NRVNKQ
Trigger: CTGCTTGTTCACCCGGTTTCAGGAGTGAGAAAAGAG...ACCTGCCTCGCCAGCAGCATCCATCTCCAGACTCTCTGGGGAACAGGTCGACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
CDS-3UTR GCA 90 bp CCTGGCCCTTCCCGTCGACCTGTTCCCCAGAGAGTCTGGAGATGGATGCTGCTGACCTGGTGTTCCCCATaGAACAGCATGAAACCACAC +
Preference number: 4 (lower is better)
Translates to: PGPSRRPVPQRVWRWMLLTWCSP*NSMKPH
Trigger: GTGTGGTTTCATGCTGTTGCATGGGGAACACCAGGT...CAGCAGCATCCATCTCCAGACTCTCTGGGGAACAGGTCGACGGGAAGGGCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
CDS-3UTR CCA 90 bp CCACAGTCCTGTTCTCTTAACCTGGGGGTGCTAGCTCCGTCCGCTTTCACCTCTGTTCCCCAGAGAGTCTaGAGATGGATGCTGCTGGCG +
Preference number: 4 (lower is better)
Translates to: PQSCSLNLGVLAPSAFTSVPQRV*RWMLLA
Trigger: CGCCAGCAGCATCCATCTCCAGACTCTCTGGGGAAC...AGAGGTGAAAGCGGACGGAGCTAGCACCCCCAGGTTAAGAGAACAGGACTGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
CDS-3UTR TCA 90 bp CCGTCGACCTGTTCCCCAGAGAGTCTGGAGATGGATGCTGCTGGCGAGGCAGGTCTTCAAGTATCTGAATaGCAACCACCTCCCTGCTCT +
Preference number: 4 (lower is better)
Translates to: PSTCSPESLEMDAAGEAGLQVSE*QPPPCS
Trigger: AGAGCAGGGAGGTGGTTGTCATTCAGATACTTGAAG...ACCTGCCTCGCCAGCAGCATCCATCTCCAGACTCTCTGGGGAACAGGTCGACGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
CDS-3UTR GCA 90 bp TGCCAGGCCAGTGTCAGTAATATCACTCTTTGGACTAATCCTTCCTTCACTCCGAGACGGCTCCGGGGTTaGGTCCGGGACTGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: CQASVSNITLWTNPSFTPRRLRG*VRDWSC
Trigger: GCAGCTCCAGTCCCGGACGCAACCCCGGAGCCGTCT...CGGAGTGAAGGAAGGATTAGTCCAAAGAGTGATATTACTGACACTGGCCTGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519011.5
ENST00000522484.5
CDS-3UTR GCA 90 bp AAACACACAAAGGCACAGTGGCAAGAGTACAAAGTAGCGAGAAGCATCCAGGTCAGACGGCTCCGGGGTTaGGTCCGGGACTGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: KHTKAQWQEYKVARSIQVRRLRG*VRDWSC
Trigger: GCAGCTCCAGTCCCGGACGCAACCCCGGAGCCGTCT...GACCTGGATGCTTCTCGCTACTTTGTACTCTTGCCACTGTGCCTTTGTGTGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519011.5
ENST00000523933.5
CDS-3UTR CCA 90 bp TGCCAGGCCAGTGTCAGTAATATCACTCTTTGGACTAATCCTTCCTTCACTCCGGGTTGCGTCCGGGACTaGAGCTGCCTCGAGAGCCGC +
Preference number: 4 (lower is better)
Translates to: CQASVSNITLWTNPSFTPGCVRD*SCLESR
Trigger: GCGGCTCTCGAGGCAGCTCCAGTCCCGGACGCAACC...CGGAGTGAAGGAAGGATTAGTCCAAAGAGTGATATTACTGACACTGGCCTGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519011.5
ENST00000522484.5
CDS-3UTR CCA 90 bp CACACAAAGGCACAGTGGCAAGAGTACAAAGTAGCGAGAAGCATCCAGGTCATAGGTTGCGTCCGGGACTaGAGCTGCCTCGAGAGCCGC +
Preference number: 4 (lower is better)
Translates to: HTKAQWQEYKVARSIQVIGCVRD*SCLESR
Trigger: GCGGCTCTCGAGGCAGCTCCAGTCCCGGACGCAACC...TATGACCTGGATGCTTCTCGCTACTTTGTACTCTTGCCACTGTGCCTTTGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519011.5
ENST00000523933.5
CDS-3UTR TCA 90 bp TGGACTAATCCTTCCTTCACTCCGCGCACTTTCAGATACACTGCCTGCCTGGCCGAGGCTGCTTGGTTCTaGAGAACTGGGGACCTGCAA +
Preference number: 4 (lower is better)
Translates to: WTNPSFTPRTFRYTACLAEAAWF*RTGDLQ
Trigger: TTGCAGGTCCCCAGTTCTTCAGAACCAAGCAGCCTC...GGCCAGGCAGGCAGTGTATCTGAAAGTGCGCGGAGTGAAGGAAGGATTAGTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
CDS-3UTR TCA 90 bp ATGATTTGCTGTAGCTCCTGTGCTGGTTCCCATGGATTTGGAAATGACCTTCAGACGGGGAGCGAGAGCTaGGCGATCCCGCGAGACTGC +
Preference number: 4 (lower is better)
Translates to: MICCSSCAGSHGFGNDLQTGSES*AIPRDC
Trigger: GCAGTCTCGCGGGATCGCTCAGCTCTCGCTCCCCGT...CTGAAGGTCATTTCCAAATCCATGGGAACCAGCACAGGAGCTACAGCAAATCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522484.5
CDS-3UTR GCA 90 bp CCTGGCCCTTCCCGTCGACCTGTTCCCCAGAGAGTCTGGAGATGGATGCTGCTGAGCATGAAACCACACTaGTTTTTGCTCGATGGCTTC +
Preference number: 4 (lower is better)
Translates to: PGPSRRPVPQRVWRWMLLSMKPH*FLLDGF
Trigger: GAAGCCATCGAGCAAAAAGCAGTGTGGTTTCATGCT...CAGCAGCATCCATCTCCAGACTCTCTGGGGAACAGGTCGACGGGAAGGGCCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
CDS-3UTR GCA 90 bp CCTGGCCCTTCCCGTCGACCTGTTCCCCAGAGAGTCTGGAGATGGATGCTGCTGCAAATTGTTGCTCTGTaGCAGGCCAGTGTCAGTAAT +
Preference number: 4 (lower is better)
Translates to: PGPSRRPVPQRVWRWMLLQIVAL*QASVSN
Trigger: ATTACTGACACTGGCCTGGCACAGAGCAACAATTTG...CAGCAGCATCCATCTCCAGACTCTCTGGGGAACAGGTCGACGGGAAGGGCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
CDS-3UTR GCA 90 bp ATGCTGCTGGCGAGGCAGGTTCACCACAGTCCTGTTCTCTTAACCTGGGGGTGCGAAGAACTGGGGACCTaGAAATTGTTGCTCTGTGCC +
Preference number: 4 (lower is better)
Translates to: MLLARQVHHSPVLLTWGCEELGT*KLLLCA
Trigger: GGCACAGAGCAACAATTTGCAGGTCCCCAGTTCTTC...GCACCCCCAGGTTAAGAGAACAGGACTGTGGTGAACCTGCCTCGCCAGCAGCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
CDS-3UTR CCA 90 bp TGTTCTCTTAACCTGGGGGTGCTAGCTCCGTCCGCTTTCACCTCTCTCATTGATGATACACTGCCTGCCTaGCCCTTCCCGTCGACCTGT +
Preference number: 4 (lower is better)
Translates to: CSLNLGVLAPSAFTSLIDDTLPA*PFPSTC
Trigger: ACAGGTCGACGGGAAGGGCCAGGCAGGCAGTGTATC...ATCAATGAGAGAGGTGAAAGCGGACGGAGCTAGCACCCCCAGGTTAAGAGAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
CDS-3UTR GCA 90 bp TGGACTAATCCTTCCTTCACTCCGCGCACTTTCAGATACACTGCCTGCCTGGCCCAGGTGAAGAGACTGTaGCCTCTTAGGAGGGGTAGA +
Preference number: 4 (lower is better)
Translates to: WTNPSFTPRTFRYTACLAQVKRL*PLRRGR
Trigger: TCTACCCCTCCTAAGAGGGCACAGTCTCTTCACCTG...GGCCAGGCAGGCAGTGTATCTGAAAGTGCGCGGAGTGAAGGAAGGATTAGTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
CDS-3UTR GCA 90 bp TTGGTTCTGAAGAACTGGGGACCTGCAAATTGTTGCTCTGTGCCAGGCCAGTGTTTCAGATACACTGCCTaGCTGGCCCTTCCCGTCGAC +
Preference number: 4 (lower is better)
Translates to: LVLKNWGPANCCSVPGQCFRYTA*LALPVD
Trigger: GTCGACGGGAAGGGCCAGGCAGGCAGTGTATCTGAA...ACACTGGCCTGGCACAGAGCAACAATTTGCAGGTCCCCAGTTCTTCAGAACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
CDS-3UTR GCA 90 bp CCACAGTCCTGTTCTCTTAACCTGGGGGTGCTAGCTCCGTCCGCTTTCACCTCTGAAGAACTGGGGACCTaGAAATTGTTGCTCTGTGCC +
Preference number: 4 (lower is better)
Translates to: PQSCSLNLGVLAPSAFTSEELGT*KLLLCA
Trigger: GGCACAGAGCAACAATTTGCAGGTCCCCAGTTCTTC...AGAGGTGAAAGCGGACGGAGCTAGCACCCCCAGGTTAAGAGAACAGGACTGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
CDS-3UTR CCA 90 bp CCACAGTCCTGTTCTCTTAACCTGGGGGTGCTAGCTCCGTCCGCTTTCACCTCTATACATGTTGGGGCATaGAGGCGCACACTGGTCAAT +
Preference number: 4 (lower is better)
Translates to: PQSCSLNLGVLAPSAFTSIHVGA*RRTLVN
Trigger: ATTGACCAGTGTGCGCCTCCATGCCCCAACATGTAT...AGAGGTGAAAGCGGACGGAGCTAGCACCCCCAGGTTAAGAGAACAGGACTGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000521195.1
ENST00000522484.5
CDS-3UTR CCA 90 bp TGTTCTCTTAACCTGGGGGTGCTAGCTCCGTCCGCTTTCACCTCTCTCATTGATGTTCCCCAGAGAGTCTaGAGATGGATGCTGCTGGCG +
Preference number: 4 (lower is better)
Translates to: CSLNLGVLAPSAFTSLIDVPQRV*RWMLLA
Trigger: CGCCAGCAGCATCCATCTCCAGACTCTCTGGGGAAC...ATCAATGAGAGAGGTGAAAGCGGACGGAGCTAGCACCCCCAGGTTAAGAGAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
CDS-3UTR TCA 90 bp CCACAGTCCTGTTCTCTTAACCTGGGGGTGCTAGCTCCGTCCGCTTTCACCTCTACCACATGGCTTGGATaGATCACTCTTTGCATCCTC +
Preference number: 4 (lower is better)
Translates to: PQSCSLNLGVLAPSAFTSTTWLG*ITLCIL
Trigger: GAGGATGCAAAGAGTGATTCATCCAAGCCATGTGGT...AGAGGTGAAAGCGGACGGAGCTAGCACCCCCAGGTTAAGAGAACAGGACTGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
CDS-3UTR TCA 90 bp AGTCTGGAGATGGATGCTGCTGGCGAGGCAGGTTCACCACAGTCCTGTTCTCTTCCCCATGCAACAGCATaGAACCACACTGCTTTTTGC +
Preference number: 4 (lower is better)
Translates to: SLEMDAAGEAGSPQSCSLPHATA*NHTAFC
Trigger: GCAAAAAGCAGTGTGGTTTCATGCTGTTGCATGGGG...AAGAGAACAGGACTGTGGTGAACCTGCCTCGCCAGCAGCATCCATCTCCAGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
CDS-3UTR GCA 90 bp GAGGCAGGTTCACCACAGTCCTGTTCTCTTAACCTGGGGGTGCTAGCTCCGTCCAACCACACTGCTTTTTaGTCGATGGCTTCACAACTC +
Preference number: 4 (lower is better)
Translates to: EAGSPQSCSLNLGVLAPSNHTAF*SMASQL
Trigger: GAGTTGTGAAGCCATCGAGCAAAAAGCAGTGTGGTT...GGACGGAGCTAGCACCCCCAGGTTAAGAGAACAGGACTGTGGTGAACCTGCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
CDS-3UTR GCA 90 bp TGCTGTAGCTCCTGTGCTGGTTCCCATGGATTTGGAAATGACCTTCAGCTTGTGGAGTCTGGAGATGGATaGTGCTGGCGAGGCAGGTTC +
Preference number: 4 (lower is better)
Translates to: CCSSCAGSHGFGNDLQLVESGDG*CWRGRF
Trigger: GAACCTGCCTCGCCAGCAGCATCCATCTCCAGACTC...CACAAGCTGAAGGTCATTTCCAAATCCATGGGAACCAGCACAGGAGCTACAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
CDS-3UTR GCA 90 bp TTTGGACTAATCCTTCCTTCACTCCGCGCACTTTCAGATACACTGCCTGCCTGGCACTTTCAGATACACTaGCTGCCTGGCCCTTCCCGT +
Preference number: 4 (lower is better)
Translates to: FGLILPSLRALSDTLPAWHFQIH*LPGPSR
Trigger: ACGGGAAGGGCCAGGCAGGCAGTGTATCTGAAAGTG...CCAGGCAGGCAGTGTATCTGAAAGTGCGCGGAGTGAAGGAAGGATTAGTCCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
CDS-3UTR CCA 90 bp TGGACTAATCCTTCCTTCACTCCGCGCACTTTCAGATACACTGCCTGCCTGGCCAACAGTCAGGAAACCTaGTGTTCCCCATGCAACAGC +
Preference number: 4 (lower is better)
Translates to: WTNPSFTPRTFRYTACLANSQET*CSPCNS
Trigger: GCTGTTGCATGGGGAACACCAGGTTTCCTGACTGTT...GGCCAGGCAGGCAGTGTATCTGAAAGTGCGCGGAGTGAAGGAAGGATTAGTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
CDS-3UTR CCA 90 bp GCCATGATTTGCTGTAGCTCCTGTGCTGGTTCCCATGGATTTGGAAATGACCTTGATACACTGCCTGCCTaGCCCTTCCCGTCGACCTGT +
Preference number: 4 (lower is better)
Translates to: AMICCSSCAGSHGFGNDLDTLPA*PFPSTC
Trigger: ACAGGTCGACGGGAAGGGCCAGGCAGGCAGTGTATC...AAGGTCATTTCCAAATCCATGGGAACCAGCACAGGAGCTACAGCAAATCATGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
CDS-3UTR TCA 90 bp AGTCTGGAGATGGATGCTGCTGGCGAGGCAGGTTCACCACAGTCCTGTTCTCTTACCACATGGCTTGGATaGATCACTCTTTGCATCCTC +
Preference number: 4 (lower is better)
Translates to: SLEMDAAGEAGSPQSCSLTTWLG*ITLCIL
Trigger: GAGGATGCAAAGAGTGATTCATCCAAGCCATGTGGT...AAGAGAACAGGACTGTGGTGAACCTGCCTCGCCAGCAGCATCCATCTCCAGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
CDS-3UTR TCA 90 bp CCTGGCCCTTCCCGTCGACCTGTTCCCCAGAGAGTCTGGAGATGGATGCTGCTGTTTTCTTCAAATTCCTaGTTTTACCACATGGCTTGG +
Preference number: 4 (lower is better)
Translates to: PGPSRRPVPQRVWRWMLLFSSNS*FYHMAW
Trigger: CCAAGCCATGTGGTAAAATCAGGAATTTGAAGAAAA...CAGCAGCATCCATCTCCAGACTCTCTGGGGAACAGGTCGACGGGAAGGGCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
CDS-3UTR TCA 90 bp TGCTGTAGCTCCTGTGCTGGTTCCCATGGATTTGGAAATGACCTTCAGCTTGTGGAGGCTGCTTGGTTCTaGAGAACTGGGGACCTGCAA +
Preference number: 4 (lower is better)
Translates to: CCSSCAGSHGFGNDLQLVEAAWF*RTGDLQ
Trigger: TTGCAGGTCCCCAGTTCTTCAGAACCAAGCAGCCTC...CACAAGCTGAAGGTCATTTCCAAATCCATGGGAACCAGCACAGGAGCTACAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
CDS-3UTR TCA 90 bp TGGACTAATCCTTCCTTCACTCCGCGCACTTTCAGATACACTGCCTGCCTGGCCCTTCAAGTATCTGAATaGCAACCACCTCCCTGCTCT +
Preference number: 4 (lower is better)
Translates to: WTNPSFTPRTFRYTACLALQVSE*QPPPCS
Trigger: AGAGCAGGGAGGTGGTTGTCATTCAGATACTTGAAG...GGCCAGGCAGGCAGTGTATCTGAAAGTGCGCGGAGTGAAGGAAGGATTAGTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
CDS-3UTR TCA 90 bp AGAGTCTGGAGATGGATGCTGCTGGCGAGGCAGGTTCACCACAGTCCTGTTCTCTGTTCTTCAAGTATCTaGATGACAACCACCTCCCTG +
Preference number: 4 (lower is better)
Translates to: RVWRWMLLARQVHHSPVLCSSSI*MTTTSL
Trigger: CAGGGAGGTGGTTGTCATTCAGATACTTGAAGAACA...GAGAACAGGACTGTGGTGAACCTGCCTCGCCAGCAGCATCCATCTCCAGACTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
CDS-3UTR GCA 90 bp TTTGGACTAATCCTTCCTTCACTCCGCGCACTTTCAGATACACTGCCTGCCTGGCAGGTGAAGAGACTGTaGCCTCTTAGGAGGGGTAGA +
Preference number: 4 (lower is better)
Translates to: FGLILPSLRALSDTLPAWQVKRL*PLRRGR
Trigger: TCTACCCCTCCTAAGAGGGCACAGTCTCTTCACCTG...CCAGGCAGGCAGTGTATCTGAAAGTGCGCGGAGTGAAGGAAGGATTAGTCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
CDS-3UTR GCA 90 bp CCACAGTCCTGTTCTCTTAACCTGGGGGTGCTAGCTCCGTCCGCTTTCACCTCTAGCATGAAACCACACTaGTTTTTGCTCGATGGCTTC +
Preference number: 4 (lower is better)
Translates to: PQSCSLNLGVLAPSAFTSSMKPH*FLLDGF
Trigger: GAAGCCATCGAGCAAAAAGCAGTGTGGTTTCATGCT...AGAGGTGAAAGCGGACGGAGCTAGCACCCCCAGGTTAAGAGAACAGGACTGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000523933.5
CDS-3UTR GCA 90 bp GAGGCAGGTTCACCACAGTCCTGTTCTCTTAACCTGGGGGTGCTAGCTCCGTCCTCGAGCTTTTGCTTTTaGCTGATAAGGACATGGGAT +
Preference number: 4 (lower is better)
Translates to: EAGSPQSCSLNLGVLAPSSSFCF*LIRTWD
Trigger: ATCCCATGTCCTTATCAGGCAAAAGCAAAAGCTCGA...GGACGGAGCTAGCACCCCCAGGTTAAGAGAACAGGACTGTGGTGAACCTGCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000519011.5
ENST00000521195.1
CDS-3UTR GCA 90 bp ATGCTGCTGGCGAGGCAGGTTCACCACAGTCCTGTTCTCTTAACCTGGGGGTGCTTCTGGTCGAGCTTTTaGTTTTGCCTGATAAGGACA +
Preference number: 4 (lower is better)
Translates to: MLLARQVHHSPVLLTWGCFWSSF*FCLIRT
Trigger: TGTCCTTATCAGGCAAAAGCAAAAGCTCGACCAGAA...GCACCCCCAGGTTAAGAGAACAGGACTGTGGTGAACCTGCCTCGCCAGCAGCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000519011.5
ENST00000521195.1
CDS-3UTR GCA 90 bp GCCATGATTTGCTGTAGCTCCTGTGCTGGTTCCCATGGATTTGGAAATGACCTTTCTGGAGATGGATGCTaGTGGCGAGGCAGGTTCACC +
Preference number: 4 (lower is better)
Translates to: AMICCSSCAGSHGFGNDLSGDGC*WRGRFT
Trigger: GGTGAACCTGCCTCGCCAGCAGCATCCATCTCCAGA...AAGGTCATTTCCAAATCCATGGGAACCAGCACAGGAGCTACAGCAAATCATGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
CDS-3UTR GCA 90 bp TGCCAGCTAAAAGAAGAGAGAGCCCAACAAACACACAAAGGCACAGTGGCAAGAGAGTCTGGAGATGGATaGTGCTGGCGAGGCAGGTTC +
Preference number: 4 (lower is better)
Translates to: CQLKEERAQQTHKGTVARESGDG*CWRGRF
Trigger: GAACCTGCCTCGCCAGCAGCATCCATCTCCAGACTC...TCTTGCCACTGTGCCTTTGTGTGTTTGTTGGGCTCTCTCTTCTTTTAGCTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519011.5
ENST00000521195.1
CDS-3UTR GCA 90 bp AAACAGTGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGAGTAACGAGAGACGGCTCCGGGGTTaGGTCCGGGACTGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: KQCIGHFQCNTNLLLSNERRLRG*VRDWSC
Trigger: GCAGCTCCAGTCCCGGACGCAACCCCGGAGCCGTCT...CTCGTTACTCAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCACTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000522484.5
ENST00000523739.5
CDS-3UTR GCA 90 bp AGAGTCTGGAGATGGATGCTGCTGGCGAGGCAGGTTCACCACAGTCCTGTTCTCAGGAAGAAAATGCTGTaGCAGCATCTTAGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: RVWRWMLLARQVHHSPVLRKKML*QHLSCS
Trigger: GCTACAGCTAAGATGCTGGCACAGCATTTTCTTCCT...GAGAACAGGACTGTGGTGAACCTGCCTCGCCAGCAGCATCCATCTCCAGACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521195.1
CDS-3UTR CCA 90 bp CCTGGCCCTTCCCGTCGACCTGTTCCCCAGAGAGTCTGGAGATGGATGCTGCTGTTTTACCACATGGCTTaGATGAATCACTCTTTGCAT +
Preference number: 4 (lower is better)
Translates to: PGPSRRPVPQRVWRWMLLFYHMA*MNHSLH
Trigger: ATGCAAAGAGTGATTCATCCAAGCCATGTGGTAAAA...CAGCAGCATCCATCTCCAGACTCTCTGGGGAACAGGTCGACGGGAAGGGCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
CDS-3UTR CCA 90 bp CCACAGTCCTGTTCTCTTAACCTGGGGGTGCTAGCTCCGTCCGCTTTCACCTCTTGCCTGATAAGGACATaGGATATGGTACTGACGACA +
Preference number: 4 (lower is better)
Translates to: PQSCSLNLGVLAPSAFTSCLIRT*DMVLTT
Trigger: TGTCGTCAGTACCATATCCCATGTCCTTATCAGGCA...AGAGGTGAAAGCGGACGGAGCTAGCACCCCCAGGTTAAGAGAACAGGACTGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000523933.5
CDS-3UTR CCA 90 bp GTAGCTCCTGTGCTGGTTCCCATGGATTTGGAAATGACCTTCAGCTTGTGTGAACAGAGAGTCTGGAGATaGATGCTGCTGGCGAGGCAG +
Preference number: 4 (lower is better)
Translates to: VAPVLVPMDLEMTFSLCEQRVWR*MLLARQ
Trigger: CTGCCTCGCCAGCAGCATCCATCTCCAGACTCTCTG...TTCACACAAGCTGAAGGTCATTTCCAAATCCATGGGAACCAGCACAGGAGCTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
CDS-3UTR CCA 90 bp TGCCAGCTAAAAGAAGAGAGAGCCCAACAAACACACAAAGGCACAGTGGCAAGAGTTCCCCAGAGAGTCTaGAGATGGATGCTGCTGGCG +
Preference number: 4 (lower is better)
Translates to: CQLKEERAQQTHKGTVARVPQRV*RWMLLA
Trigger: CGCCAGCAGCATCCATCTCCAGACTCTCTGGGGAAC...TCTTGCCACTGTGCCTTTGTGTGTTTGTTGGGCTCTCTCTTCTTTTAGCTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519011.5
ENST00000521195.1
CDS-3UTR TCA 90 bp CCACAGTCCTGTTCTCTTAACCTGGGGGTGCTAGCTCCGTCCGCTTTCACCTCTCAAGGTGGAACCACATaGATTTGTTCTATGCAGGTT +
Preference number: 4 (lower is better)
Translates to: PQSCSLNLGVLAPSAFTSQGGTT*ICSMQV
Trigger: AACCTGCATAGAACAAATTCATGTGGTTCCACCTTG...AGAGGTGAAAGCGGACGGAGCTAGCACCCCCAGGTTAAGAGAACAGGACTGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000521195.1
ENST00000522484.5
ENST00000523933.5
CDS-3UTR TCA 90 bp TTGGTTCTGAAGAACTGGGGACCTGCAAATTGTTGCTCTGTGCCAGGCCAGTGTCCCCATGCAACAGCATaGAACCACACTGCTTTTTGC +
Preference number: 4 (lower is better)
Translates to: LVLKNWGPANCCSVPGQCPHATA*NHTAFC
Trigger: GCAAAAAGCAGTGTGGTTTCATGCTGTTGCATGGGG...ACACTGGCCTGGCACAGAGCAACAATTTGCAGGTCCCCAGTTCTTCAGAACCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
CDS-3UTR TCA 90 bp ACCTGGTGTTCCCCATGCAACAGCATGAAACCACACTGCTTTTTGCTCGATGGCACTGCAGAAGTGCCATaGTTTGCTGTAGCTCCTGTG +
Preference number: 4 (lower is better)
Translates to: TWCSPCNSMKPHCFLLDGTAEVP*FAVAPV
Trigger: CACAGGAGCTACAGCAAATCATGGCACTTCTGCAGT...GCCATCGAGCAAAAAGCAGTGTGGTTTCATGCTGTTGCATGGGGAACACCAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000523933.5
CDS-3UTR TCA 90 bp TTTGGACTAATCCTTCCTTCACTCCGCGCACTTTCAGATACACTGCCTGCCTGGACTGCAGAAGTGCCATaGTTTGCTGTAGCTCCTGTG +
Preference number: 4 (lower is better)
Translates to: FGLILPSLRALSDTLPAWTAEVP*FAVAPV
Trigger: CACAGGAGCTACAGCAAATCATGGCACTTCTGCAGT...CCAGGCAGGCAGTGTATCTGAAAGTGCGCGGAGTGAAGGAAGGATTAGTCCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
CDS-3UTR TCA 90 bp TGGACTAATCCTTCCTTCACTCCGCGCACTTTCAGATACACTGCCTGCCTGGCCTGTTCTTCAAGTATCTaGATGACAACCACCTCCCTG +
Preference number: 4 (lower is better)
Translates to: WTNPSFTPRTFRYTACLACSSSI*MTTTSL
Trigger: CAGGGAGGTGGTTGTCATTCAGATACTTGAAGAACA...GGCCAGGCAGGCAGTGTATCTGAAAGTGCGCGGAGTGAAGGAAGGATTAGTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
CDS-3UTR GCA 90 bp AGAGTCTGGAGATGGATGCTGCTGGCGAGGCAGGTTCACCACAGTCCTGTTCTCTCGAGCTTTTGCTTTTaGCTGATAAGGACATGGGAT +
Preference number: 4 (lower is better)
Translates to: RVWRWMLLARQVHHSPVLSSFCF*LIRTWD
Trigger: ATCCCATGTCCTTATCAGGCAAAAGCAAAAGCTCGA...GAGAACAGGACTGTGGTGAACCTGCCTCGCCAGCAGCATCCATCTCCAGACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519011.5
ENST00000521195.1
CDS-3UTR GCA 90 bp AGAGTCTGGAGATGGATGCTGCTGGCGAGGCAGGTTCACCACAGTCCTGTTCTCTTCTGGTCGAGCTTTTaGTTTTGCCTGATAAGGACA +
Preference number: 4 (lower is better)
Translates to: RVWRWMLLARQVHHSPVLFWSSF*FCLIRT
Trigger: TGTCCTTATCAGGCAAAAGCAAAAGCTCGACCAGAA...GAGAACAGGACTGTGGTGAACCTGCCTCGCCAGCAGCATCCATCTCCAGACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519011.5
ENST00000521195.1
CDS-3UTR GCA 90 bp CCACAGTCCTGTTCTCTTAACCTGGGGGTGCTAGCTCCGTCCGCTTTCACCTCTGCTAGTAATTGCTACTaGAGAAGTGCCATGATTTGC +
Preference number: 4 (lower is better)
Translates to: PQSCSLNLGVLAPSAFTSASNCY*RSAMIC
Trigger: GCAAATCATGGCACTTCTGCAGTAGCAATTACTAGC...AGAGGTGAAAGCGGACGGAGCTAGCACCCCCAGGTTAAGAGAACAGGACTGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000523933.5
CDS-3UTR GCA 90 bp CCACAGTCCTGTTCTCTTAACCTGGGGGTGCTAGCTCCGTCCGCTTTCACCTCTATCATGGCTAGTAATTaGTACTGCAGAAGTGCCATG +
Preference number: 4 (lower is better)
Translates to: PQSCSLNLGVLAPSAFTSIMASN*YCRSAM
Trigger: CATGGCACTTCTGCAGTAGCAATTACTAGCCATGAT...AGAGGTGAAAGCGGACGGAGCTAGCACCCCCAGGTTAAGAGAACAGGACTGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000523933.5
CDS-3UTR GCA 90 bp TGTGCCAGGCCAGTGTCAGTAATATCACTCTTTGGACTAATCCTTCCTTCACTCTCTGGAGATGGATGCTaGTGGCGAGGCAGGTTCACC +
Preference number: 4 (lower is better)
Translates to: CARPVSVISLFGLILPSLSGDGC*WRGRFT
Trigger: GGTGAACCTGCCTCGCCAGCAGCATCCATCTCCAGA...GAGTGAAGGAAGGATTAGTCCAAAGAGTGATATTACTGACACTGGCCTGGCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
CDS-3UTR GCA 90 bp TTGCCTGATAAGGACATGGGATATGGTACTGACGACAATGATCAGAGACCCAAGGAGTCTGGAGATGGATaGTGCTGGCGAGGCAGGTTC +
Preference number: 4 (lower is better)
Translates to: LPDKDMGYGTDDNDQRPKESGDG*CWRGRF
Trigger: GAACCTGCCTCGCCAGCAGCATCCATCTCCAGACTC...CTTGGGTCTCTGATCATTGTCGTCAGTACCATATCCCATGTCCTTATCAGGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519011.5
ENST00000521195.1
CDS-3UTR GCA 90 bp GCACAGTGGCAAGAGTACAAAGTAGCGAGAAGCATCCAGGTCATAAAGGCCAACGGACCTGCAAATTGTTaGTCTGTGCCAGGCCAGTGT +
Preference number: 4 (lower is better)
Translates to: AQWQEYKVARSIQVIKANGPANC*SVPGQC
Trigger: ACACTGGCCTGGCACAGAGCAACAATTTGCAGGTCC...GTTGGCCTTTATGACCTGGATGCTTCTCGCTACTTTGTACTCTTGCCACTGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519011.5
ENST00000521195.1
CDS-3UTR GCA 90 bp ATTCTTACAAAACAGTGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGGTCCGGGACTGGAGCTaGCTCGAGAGCCGCACGGGG +
Preference number: 4 (lower is better)
Translates to: ILTKQCIGHFQCNTNLLLVRDWS*LESRTG
Trigger: CCCCGTGCGGCTCTCGAGGCAGCTCCAGTCCCGGAC...CAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCACTGTTTTGTAAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522484.5
ENST00000523739.5
CDS-3UTR GCA 90 bp GCAAAAGAAGAATGTAACAGTGATTCTTACAAAACAGTGCATAGGTCACTTCCAGTCCGGGACTGGAGCTaGCTCGAGAGCCGCACGGGG +
Preference number: 4 (lower is better)
Translates to: AKEECNSDSYKTVHRSLPVRDWS*LESRTG
Trigger: CCCCGTGCGGCTCTCGAGGCAGCTCCAGTCCCGGAC...TGGAAGTGACCTATGCACTGTTTTGTAAGAATCACTGTTACATTCTTCTTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000522484.5
ENST00000523739.5
CDS-3UTR CCA 90 bp AGGACATGGGATATGGTACTGACGACAATGATCAGAGACCCAAGTTATCTCCCAGGAGATGGATGCTGCTaGCGAGGCAGGTTCACCACA +
Preference number: 4 (lower is better)
Translates to: RTWDMVLTTMIRDPSYLPGDGCC*RGRFTT
Trigger: TGTGGTGAACCTGCCTCGCCAGCAGCATCCATCTCC...TGGGAGATAACTTGGGTCTCTGATCATTGTCGTCAGTACCATATCCCATGTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519011.5
ENST00000521195.1
CDS-3UTR CCA 90 bp GTACAAAGTAGCGAGAAGCATCCAGGTCATAAAGGCCAACAAAGCAAACTCCACCAGAGAGTCTGGAGATaGATGCTGCTGGCGAGGCAG +
Preference number: 4 (lower is better)
Translates to: VQSSEKHPGHKGQQSKLHQRVWR*MLLARQ
Trigger: CTGCCTCGCCAGCAGCATCCATCTCCAGACTCTCTG...GTGGAGTTTGCTTTGTTGGCCTTTATGACCTGGATGCTTCTCGCTACTTTGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519011.5
ENST00000521195.1
CDS-3UTR CCA 90 bp TGTGCCAGGCCAGTGTCAGTAATATCACTCTTTGGACTAATCCTTCCTTCACTCCAGAGAGTCTGGAGATaGATGCTGCTGGCGAGGCAG +
Preference number: 4 (lower is better)
Translates to: CARPVSVISLFGLILPSLQRVWR*MLLARQ
Trigger: CTGCCTCGCCAGCAGCATCCATCTCCAGACTCTCTG...GAGTGAAGGAAGGATTAGTCCAAAGAGTGATATTACTGACACTGGCCTGGCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
CDS-3UTR CCA 90 bp AGTCTGGAGATGGATGCTGCTGGCGAGGCAGGTTCACCACAGTCCTGTTCTCTTTTGGTTCTGAAGAACTaGGGACCTGCAAATTGTTGC +
Preference number: 4 (lower is better)
Translates to: SLEMDAAGEAGSPQSCSLLVLKN*GPANCC
Trigger: GCAACAATTTGCAGGTCCCCAGTTCTTCAGAACCAA...AAGAGAACAGGACTGTGGTGAACCTGCCTCGCCAGCAGCATCCATCTCCAGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
CDS-3UTR GCA 90 bp GCCATGATTTGCTGTAGCTCCTGTGCTGGTTCCCATGGATTTGGAAATGACCTTGCGAGAGGAAGAAAATaGTCCATTTCCACCGCGGCA +
Preference number: 4 (lower is better)
Translates to: AMICCSSCAGSHGFGNDLARGRK*SISTAA
Trigger: TGCCGCGGTGGAAATGGAGCATTTTCTTCCTCTCGC...AAGGTCATTTCCAAATCCATGGGAACCAGCACAGGAGCTACAGCAAATCATGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522484.5
ENST00000523933.5
CDS-3UTR GCA 90 bp TTGGTTCTGAAGAACTGGGGACCTGCAAATTGTTGCTCTGTGCCAGGCCAGTGTGCGAGAGGAAGAAAATaGTGTGCCAGCATCTTAGCT +
Preference number: 4 (lower is better)
Translates to: LVLKNWGPANCCSVPGQCARGRK*CASILA
Trigger: AGCTAAGATGCTGGCACAGCATTTTCTTCCTCTCGC...ACACTGGCCTGGCACAGAGCAACAATTTGCAGGTCCCCAGTTCTTCAGAACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521195.1
CDS-3UTR CCA 90 bp TGCTGTAGCTCCTGTGCTGGTTCCCATGGATTTGGAAATGACCTTCAGCTTGTGAACAGTCAGGAAACCTaGTGTTCCCCATGCAACAGC +
Preference number: 4 (lower is better)
Translates to: CCSSCAGSHGFGNDLQLVNSQET*CSPCNS
Trigger: GCTGTTGCATGGGGAACACCAGGTTTCCTGACTGTT...CACAAGCTGAAGGTCATTTCCAAATCCATGGGAACCAGCACAGGAGCTACAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000523933.5
CDS-3UTR CCA 90 bp TGTTCTCTTAACCTGGGGGTGCTAGCTCCGTCCGCTTTCACCTCTCTCATTGATCACACAAAGGCACAGTaGCAAGAGTACAAAGTAGCG +
Preference number: 4 (lower is better)
Translates to: CSLNLGVLAPSAFTSLIDHTKAQ*QEYKVA
Trigger: CGCTACTTTGTACTCTTGCCACTGTGCCTTTGTGTG...ATCAATGAGAGAGGTGAAAGCGGACGGAGCTAGCACCCCCAGGTTAAGAGAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000523933.5
CDS-3UTR CCA 90 bp ATCATGGCTAGTAATTGCTACTGCAGAAGTGCCATGATTTGCTGTAGCTCCTGTGGAGATGGATGCTGCTaGCGAGGCAGGTTCACCACA +
Preference number: 4 (lower is better)
Translates to: IMASNCYCRSAMICCSSCGDGCC*RGRFTT
Trigger: TGTGGTGAACCTGCCTCGCCAGCAGCATCCATCTCC...ACAGGAGCTACAGCAAATCATGGCACTTCTGCAGTAGCAATTACTAGCCATGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
CDS-3UTR CCA 90 bp GCAAAAGAAGAATGTAACAGTGATTCTTACAAAACAGTGCATAGGTCACTTCCAGGTTGCGTCCGGGACTaGAGCTGCCTCGAGAGCCGC +
Preference number: 4 (lower is better)
Translates to: AKEECNSDSYKTVHRSLPGCVRD*SCLESR
Trigger: GCGGCTCTCGAGGCAGCTCCAGTCCCGGACGCAACC...TGGAAGTGACCTATGCACTGTTTTGTAAGAATCACTGTTACATTCTTCTTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000522484.5
ENST00000523739.5
3UTR CAA 72 bp AGGCTGCTTGGTTCTGAAGAACTGGGGACCTGCAAATaGTTGCTCTGTGCCAGGCCAGTGTCAGTAATATCA +
Preference number: 4 (lower is better)
Translates to: RLLGSEELGTCK*LLCARPVSVIS
Trigger: TGATATTACTGACACTGGCCTGGCACAGAGCAACAATTTGCAGGTCCCCAGTTCTTCAGAACCAAGCAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
CDS-3UTR TCA 90 bp CTAGCTCCGTCCGCTTTCACCTCTCTCATTGATGTTTCTGGTGAGGTTTGGATTACTGCAGAAGTGCCATaGTTTGCTGTAGCTCCTGTG +
Preference number: 4 (lower is better)
Translates to: LAPSAFTSLIDVSGEVWITAEVP*FAVAPV
Trigger: CACAGGAGCTACAGCAAATCATGGCACTTCTGCAGT...AATCCAAACCTCACCAGAAACATCAATGAGAGAGGTGAAAGCGGACGGAGCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000523933.5
CDS-3UTR TCA 90 bp CTAGCTCCGTCCGCTTTCACCTCTCTCATTGATGTTTCTGGTGAGGTTTGGATTGAGATGTGGAACCTTTaGGGCTGCTTGGTTCTGAAG +
Preference number: 4 (lower is better)
Translates to: LAPSAFTSLIDVSGEVWIEMWNL*GCLVLK
Trigger: CTTCAGAACCAAGCAGCCTCAAAGGTTCCACATCTC...AATCCAAACCTCACCAGAAACATCAATGAGAGAGGTGAAAGCGGACGGAGCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
CDS-3UTR TCA 90 bp AGTAATTGCTACTGCAGAAGTGCCATGATTTGCTGTAGCTCCTGTGCTGGTTCCGAGATGTGGAACCTTTaGGGCTGCTTGGTTCTGAAG +
Preference number: 4 (lower is better)
Translates to: SNCYCRSAMICCSSCAGSEMWNL*GCLVLK
Trigger: CTTCAGAACCAAGCAGCCTCAAAGGTTCCACATCTC...GGAACCAGCACAGGAGCTACAGCAAATCATGGCACTTCTGCAGTAGCAATTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
CDS-3UTR TCA 90 bp GTAGCTCCTGTGCTGGTTCCCATGGATTTGGAAATGACCTTCAGCTTGTGTGAACTCTTTTCTCACTCCTaGAACCGGGTGAACAAGCAG +
Preference number: 4 (lower is better)
Translates to: VAPVLVPMDLEMTFSLCELFSHS*NRVNKQ
Trigger: CTGCTTGTTCACCCGGTTTCAGGAGTGAGAAAAGAG...TTCACACAAGCTGAAGGTCATTTCCAAATCCATGGGAACCAGCACAGGAGCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
CDS-3UTR GCA 90 bp TGTGCCAGGCCAGTGTCAGTAATATCACTCTTTGGACTAATCCTTCCTTCACTCGCGAGAGGAAGAAAATaGTCCATTTCCACCGCGGCA +
Preference number: 4 (lower is better)
Translates to: CARPVSVISLFGLILPSLARGRK*SISTAA
Trigger: TGCCGCGGTGGAAATGGAGCATTTTCTTCCTCTCGC...GAGTGAAGGAAGGATTAGTCCAAAGAGTGATATTACTGACACTGGCCTGGCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522484.5
CDS-3UTR GCA 90 bp AGTAATTGCTACTGCAGAAGTGCCATGATTTGCTGTAGCTCCTGTGCTGGTTCCACCTGGTGTTCCCCATaGAACAGCATGAAACCACAC +
Preference number: 4 (lower is better)
Translates to: SNCYCRSAMICCSSCAGSTWCSP*NSMKPH
Trigger: GTGTGGTTTCATGCTGTTGCATGGGGAACACCAGGT...GGAACCAGCACAGGAGCTACAGCAAATCATGGCACTTCTGCAGTAGCAATTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000523933.5
CDS-3UTR CCA 90 bp CCACAGTCCTGTTCTCTTAACCTGGGGGTGCTAGCTCCGTCCGCTTTCACCTCTAAGTTTACGACAAGGTaGAACCACATGAATTTGTTC +
Preference number: 4 (lower is better)
Translates to: PQSCSLNLGVLAPSAFTSKFTTR*NHMNLF
Trigger: GAACAAATTCATGTGGTTCCACCTTGTCGTAAACTT...AGAGGTGAAAGCGGACGGAGCTAGCACCCCCAGGTTAAGAGAACAGGACTGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000521195.1
ENST00000522484.5
ENST00000523933.5
CDS-3UTR CCA 90 bp TGGACTAATCCTTCCTTCACTCCGCGCACTTTCAGATACACTGCCTGCCTGGCCAGTCTTAAGATGCCTTaGACACCAAAATCCAATGTC +
Preference number: 4 (lower is better)
Translates to: WTNPSFTPRTFRYTACLASLKMP*TPKSNV
Trigger: GACATTGGATTTTGGTGTCCAAGGCATCTTAAGACT...GGCCAGGCAGGCAGTGTATCTGAAAGTGCGCGGAGTGAAGGAAGGATTAGTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521195.1
ENST00000522484.5
CDS-3UTR CCA 90 bp TGCCAGGCCAGTGTCAGTAATATCACTCTTTGGACTAATCCTTCCTTCACTCCGATACATGTTGGGGCATaGAGGCGCACACTGGTCAAT +
Preference number: 4 (lower is better)
Translates to: CQASVSNITLWTNPSFTPIHVGA*RRTLVN
Trigger: ATTGACCAGTGTGCGCCTCCATGCCCCAACATGTAT...CGGAGTGAAGGAAGGATTAGTCCAAAGAGTGATATTACTGACACTGGCCTGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521195.1
ENST00000522484.5
3UTR CAA 72 bp AGGCGCACACTGGTCAATTCCCAGAAACTTATATCCTaGTCCCCCAGAAGTCTTAAGATGCCTTGGACACCA +
Preference number: 4 (lower is better)
Translates to: RRTLVNSQKLIS*SPRSLKMPWTP
Trigger: TGGTGTCCAAGGCATCTTAAGACTTCTGGGGGACAAGGATATAAGTTTCTGGGAATTGACCAGTGTGCGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521195.1
CDS-3UTR TCA 90 bp CTAGCTCCGTCCGCTTTCACCTCTCTCATTGATGTTTCTGGTGAGGTTTGGATTGTGCAAGCCTTATTTTaGGAGCCTAGGACAACAGTG +
Preference number: 4 (lower is better)
Translates to: LAPSAFTSLIDVSGEVWIVQALF*EPRTTV
Trigger: CACTGTTGTCCTAGGCTCTCAAAATAAGGCTTGCAC...AATCCAAACCTCACCAGAAACATCAATGAGAGAGGTGAAAGCGGACGGAGCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521195.1
ENST00000522484.5
CDS-3UTR TCA 90 bp TGTGCCAGGCCAGTGTCAGTAATATCACTCTTTGGACTAATCCTTCCTTCACTCCCCCATGCAACAGCATaGAACCACACTGCTTTTTGC +
Preference number: 4 (lower is better)
Translates to: CARPVSVISLFGLILPSLPHATA*NHTAFC
Trigger: GCAAAAAGCAGTGTGGTTTCATGCTGTTGCATGGGG...GAGTGAAGGAAGGATTAGTCCAAAGAGTGATATTACTGACACTGGCCTGGCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
CDS-3UTR GCA 90 bp GTACAAAGTAGCGAGAAGCATCCAGGTCATAAAGGCCAACAAAGCAAACTCCACACCTGGTGTTCCCCATaGAACAGCATGAAACCACAC +
Preference number: 4 (lower is better)
Translates to: VQSSEKHPGHKGQQSKLHTWCSP*NSMKPH
Trigger: GTGTGGTTTCATGCTGTTGCATGGGGAACACCAGGT...GTGGAGTTTGCTTTGTTGGCCTTTATGACCTGGATGCTTCTCGCTACTTTGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000523933.5
CDS-3UTR GCA 90 bp CTAGCTCCGTCCGCTTTCACCTCTCTCATTGATGTTTCTGGTGAGGTTTGGATTAGAAGTGCCATGATTTaGTGTAGCTCCTGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: LAPSAFTSLIDVSGEVWIRSAMI*CSSCAG
Trigger: ACCAGCACAGGAGCTACAGCAAATCATGGCACTTCT...AATCCAAACCTCACCAGAAACATCAATGAGAGAGGTGAAAGCGGACGGAGCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000523933.5
CDS-3UTR GCA 90 bp AAACAGTGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGAGTAACGAGTCTGGAGATGGATGCTaGTGGCGAGGCAGGTTCACC +
Preference number: 4 (lower is better)
Translates to: KQCIGHFQCNTNLLLSNESGDGC*WRGRFT
Trigger: GGTGAACCTGCCTCGCCAGCAGCATCCATCTCCAGA...CTCGTTACTCAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCACTGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR GCA 90 bp AAACAGTGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGAGTAACGAGTTCAGATACACTGCCTaGCTGGCCCTTCCCGTCGAC +
Preference number: 4 (lower is better)
Translates to: KQCIGHFQCNTNLLLSNEFRYTA*LALPVD
Trigger: GTCGACGGGAAGGGCCAGGCAGGCAGTGTATCTGAA...CTCGTTACTCAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCACTGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR GCA 90 bp CCACAGTCCTGTTCTCTTAACCTGGGGGTGCTAGCTCCGTCCGCTTTCACCTCTAAAAGGGAAGTCAATTaGACTTGGCCTAATATACAA +
Preference number: 4 (lower is better)
Translates to: PQSCSLNLGVLAPSAFTSKREVN*TWPNIQ
Trigger: TTGTATATTAGGCCAAGTGCAATTGACTTCCCTTTT...AGAGGTGAAAGCGGACGGAGCTAGCACCCCCAGGTTAAGAGAACAGGACTGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522484.5
CDS-3UTR GCA 90 bp TGTTCTCTTAACCTGGGGGTGCTAGCTCCGTCCGCTTTCACCTCTCTCATTGATACTCCATTTTCTTCCTaGAGCTGTCACATTCAAGCT +
Preference number: 4 (lower is better)
Translates to: CSLNLGVLAPSAFTSLIDTPFSS*SCHIQA
Trigger: AGCTTGAATGTGACAGCTGCAGGAAGAAAATGGAGT...ATCAATGAGAGAGGTGAAAGCGGACGGAGCTAGCACCCCCAGGTTAAGAGAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523933.5
CDS-3UTR CCA 90 bp GCCATGATTTGCTGTAGCTCCTGTGCTGGTTCCCATGGATTTGGAAATGACCTTCATGGAGGCGCACACTaGTCAATTCCCAGAAACTTA +
Preference number: 4 (lower is better)
Translates to: AMICCSSCAGSHGFGNDLHGGAH*SIPRNL
Trigger: TAAGTTTCTGGGAATTGACCAGTGTGCGCCTCCATG...AAGGTCATTTCCAAATCCATGGGAACCAGCACAGGAGCTACAGCAAATCATGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521195.1
ENST00000522484.5
CDS-3UTR CCA 90 bp GACCCAAGTTATCTCCCAGGTAATCCTGTTCACTTGCTCATAGACGTAACATCCAACAGTCAGGAAACCTaGTGTTCCCCATGCAACAGC +
Preference number: 4 (lower is better)
Translates to: DPSYLPGNPVHLLIDVTSNSQET*CSPCNS
Trigger: GCTGTTGCATGGGGAACACCAGGTTTCCTGACTGTT...GGATGTTACGTCTATGAGCAAGTGAACAGGATTACCTGGGAGATAACTTGGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000523933.5
CDS-3UTR CCA 90 bp AGTAATTGCTACTGCAGAAGTGCCATGATTTGCTGTAGCTCCTGTGCTGGTTCCCACACAAAGGCACAGTaGCAAGAGTACAAAGTAGCG +
Preference number: 4 (lower is better)
Translates to: SNCYCRSAMICCSSCAGSHTKAQ*QEYKVA
Trigger: CGCTACTTTGTACTCTTGCCACTGTGCCTTTGTGTG...GGAACCAGCACAGGAGCTACAGCAAATCATGGCACTTCTGCAGTAGCAATTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000523933.5
CDS-3UTR CCA 90 bp TGCTGTAGCTCCTGTGCTGGTTCCCATGGATTTGGAAATGACCTTCAGCTTGTGTGCCTGATAAGGACATaGGATATGGTACTGACGACA +
Preference number: 4 (lower is better)
Translates to: CCSSCAGSHGFGNDLQLVCLIRT*DMVLTT
Trigger: TGTCGTCAGTACCATATCCCATGTCCTTATCAGGCA...CACAAGCTGAAGGTCATTTCCAAATCCATGGGAACCAGCACAGGAGCTACAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000523933.5
CDS-3UTR CCA 90 bp AAACAGTGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGAGTAACGAGGTTCCCCAGAGAGTCTaGAGATGGATGCTGCTGGCG +
Preference number: 4 (lower is better)
Translates to: KQCIGHFQCNTNLLLSNEVPQRV*RWMLLA
Trigger: CGCCAGCAGCATCCATCTCCAGACTCTCTGGGGAAC...CTCGTTACTCAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCACTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR CCA 90 bp AGAGTCTGGAGATGGATGCTGCTGGCGAGGCAGGTTCACCACAGTCCTGTTCTCGAAGTCAATTGCACTTaGCCTAATATACAAAAGACT +
Preference number: 4 (lower is better)
Translates to: RVWRWMLLARQVHHSPVLEVNCT*PNIQKT
Trigger: AGTCTTTTGTATATTAGGCCAAGTGCAATTGACTTC...GAGAACAGGACTGTGGTGAACCTGCCTCGCCAGCAGCATCCATCTCCAGACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522484.5
CDS-3UTR TCA 90 bp TGTGCCAGGCCAGTGTCAGTAATATCACTCTTTGGACTAATCCTTCCTTCACTCACCACATGGCTTGGATaGATCACTCTTTGCATCCTC +
Preference number: 4 (lower is better)
Translates to: CARPVSVISLFGLILPSLTTWLG*ITLCIL
Trigger: GAGGATGCAAAGAGTGATTCATCCAAGCCATGTGGT...GAGTGAAGGAAGGATTAGTCCAAAGAGTGATATTACTGACACTGGCCTGGCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
CDS-3UTR TCA 90 bp ACCTGGTGTTCCCCATGCAACAGCATGAAACCACACTGCTTTTTGCTCGATGGCGGCCATCATGTTGTATaGCTTGTCGAACATGATTTA +
Preference number: 4 (lower is better)
Translates to: TWCSPCNSMKPHCFLLDGGHHVV*LVEHDL
Trigger: TAAATCATGTTCGACAAGTCATACAACATGATGGCC...GCCATCGAGCAAAAAGCAGTGTGGTTTCATGCTGTTGCATGGGGAACACCAGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000523933.5
CDS-3UTR TCA 90 bp TTTGGACTAATCCTTCCTTCACTCCGCGCACTTTCAGATACACTGCCTGCCTGGGGCCATCATGTTGTATaGCTTGTCGAACATGATTTA +
Preference number: 4 (lower is better)
Translates to: FGLILPSLRALSDTLPAWGHHVV*LVEHDL
Trigger: TAAATCATGTTCGACAAGTCATACAACATGATGGCC...CCAGGCAGGCAGTGTATCTGAAAGTGCGCGGAGTGAAGGAAGGATTAGTCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
CDS-3UTR TCA 90 bp ATCATGGCTAGTAATTGCTACTGCAGAAGTGCCATGATTTGCTGTAGCTCCTGTACTGCAGAAGTGCCATaGTTTGCTGTAGCTCCTGTG +
Preference number: 4 (lower is better)
Translates to: IMASNCYCRSAMICCSSCTAEVP*FAVAPV
Trigger: CACAGGAGCTACAGCAAATCATGGCACTTCTGCAGT...ACAGGAGCTACAGCAAATCATGGCACTTCTGCAGTAGCAATTACTAGCCATGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000523933.5
CDS-3UTR GCA 90 bp GCCATGATTTGCTGTAGCTCCTGTGCTGGTTCCCATGGATTTGGAAATGACCTTAACCACACTGCTTTTTaGTCGATGGCTTCACAACTC +
Preference number: 4 (lower is better)
Translates to: AMICCSSCAGSHGFGNDLNHTAF*SMASQL
Trigger: GAGTTGTGAAGCCATCGAGCAAAAAGCAGTGTGGTT...AAGGTCATTTCCAAATCCATGGGAACCAGCACAGGAGCTACAGCAAATCATGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000523933.5
CDS-3UTR GCA 90 bp AAACACACAAAGGCACAGTGGCAAGAGTACAAAGTAGCGAGAAGCATCCAGGTCAGCATGAAACCACACTaGTTTTTGCTCGATGGCTTC +
Preference number: 4 (lower is better)
Translates to: KHTKAQWQEYKVARSIQVSMKPH*FLLDGF
Trigger: GAAGCCATCGAGCAAAAAGCAGTGTGGTTTCATGCT...GACCTGGATGCTTCTCGCTACTTTGTACTCTTGCCACTGTGCCTTTGTGTGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000523933.5
CDS-3UTR GCA 90 bp ATGATTTGCTGTAGCTCCTGTGCTGGTTCCCATGGATTTGGAAATGACCTTCAGAGAAGTGCCATGATTTaGTGTAGCTCCTGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: MICCSSCAGSHGFGNDLQRSAMI*CSSCAG
Trigger: ACCAGCACAGGAGCTACAGCAAATCATGGCACTTCT...CTGAAGGTCATTTCCAAATCCATGGGAACCAGCACAGGAGCTACAGCAAATCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000523933.5
CDS-3UTR GCA 90 bp GCACTAATATCGCTATCACACTTTTTAATGTTCAGCAAAATCCTAGTGAGCTGCTCTGGAGATGGATGCTaGTGGCGAGGCAGGTTCACC +
Preference number: 4 (lower is better)
Translates to: ALISLSHFLMFSKILVSCSGDGC*WRGRFT
Trigger: GGTGAACCTGCCTCGCCAGCAGCATCCATCTCCAGA...GCAGCTCACTAGGATTTTGCTGAACATTAAAAAGTGTGATAGCGATATTAGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358755.5
ENST00000522484.5
ENST00000522566.5
CDS-3UTR GCA 90 bp TGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGAGTAACGAGAGAAAAGAGTCTGGAGATGGATaGTGCTGGCGAGGCAGGTTC +
Preference number: 4 (lower is better)
Translates to: CIGHFQCNTNLLLSNERKESGDG*CWRGRF
Trigger: GAACCTGCCTCGCCAGCAGCATCCATCTCCAGACTC...TTTTCTCTCGTTACTCAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR GCA 90 bp TGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGAGTAACGAGAGAAAATTCAGATACACTGCCTaGCTGGCCCTTCCCGTCGAC +
Preference number: 4 (lower is better)
Translates to: CIGHFQCNTNLLLSNERKFRYTA*LALPVD
Trigger: GTCGACGGGAAGGGCCAGGCAGGCAGTGTATCTGAA...TTTTCTCTCGTTACTCAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR GCA 90 bp GCACTAATATCGCTATCACACTTTTTAATGTTCAGCAAAATCCTAGTGAGCTGCTTCAGATACACTGCCTaGCTGGCCCTTCCCGTCGAC +
Preference number: 4 (lower is better)
Translates to: ALISLSHFLMFSKILVSCFRYTA*LALPVD
Trigger: GTCGACGGGAAGGGCCAGGCAGGCAGTGTATCTGAA...GCAGCTCACTAGGATTTTGCTGAACATTAAAAAGTGTGATAGCGATATTAGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358755.5
ENST00000522484.5
ENST00000522566.5
CDS-3UTR GCA 90 bp CACACAAAGGCACAGTGGCAAGAGTACAAAGTAGCGAGAAGCATCCAGGTCATACAAATTGTTGCTCTGTaGCAGGCCAGTGTCAGTAAT +
Preference number: 4 (lower is better)
Translates to: HTKAQWQEYKVARSIQVIQIVAL*QASVSN
Trigger: ATTACTGACACTGGCCTGGCACAGAGCAACAATTTG...TATGACCTGGATGCTTCTCGCTACTTTGTACTCTTGCCACTGTGCCTTTGTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519011.5
ENST00000521195.1
CDS-3UTR GCA 90 bp AGTCTGGAGATGGATGCTGCTGGCGAGGCAGGTTCACCACAGTCCTGTTCTCTTAAAATCCTAGTGAGCTaGCGAAATGAATTCTACAAA +
Preference number: 4 (lower is better)
Translates to: SLEMDAAGEAGSPQSCSLKILVS*RNEFYK
Trigger: TTTGTAGAATTCATTTCGGCAGCTCACTAGGATTTT...AAGAGAACAGGACTGTGGTGAACCTGCCTCGCCAGCAGCATCCATCTCCAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522484.5
CDS-3UTR CCA 90 bp TACAAAGTAGCGAGAAGCATCCAGGTCATAAAGGCCAACAAAGCAAACTCCACTAACAGTCAGGAAACCTaGTGTTCCCCATGCAACAGC +
Preference number: 4 (lower is better)
Translates to: YKVARSIQVIKANKANSTNSQET*CSPCNS
Trigger: GCTGTTGCATGGGGAACACCAGGTTTCCTGACTGTT...AGTGGAGTTTGCTTTGTTGGCCTTTATGACCTGGATGCTTCTCGCTACTTTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000523933.5
CDS-3UTR CCA 90 bp AAACACACAAAGGCACAGTGGCAAGAGTACAAAGTAGCGAGAAGCATCCAGGTCTGCCTGATAAGGACATaGGATATGGTACTGACGACA +
Preference number: 4 (lower is better)
Translates to: KHTKAQWQEYKVARSIQVCLIRT*DMVLTT
Trigger: TGTCGTCAGTACCATATCCCATGTCCTTATCAGGCA...GACCTGGATGCTTCTCGCTACTTTGTACTCTTGCCACTGTGCCTTTGTGTGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000523933.5
CDS-3UTR CCA 90 bp TGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGAGTAACGAGAGAAAAGTTCCCCAGAGAGTCTaGAGATGGATGCTGCTGGCG +
Preference number: 4 (lower is better)
Translates to: CIGHFQCNTNLLLSNERKVPQRV*RWMLLA
Trigger: CGCCAGCAGCATCCATCTCCAGACTCTCTGGGGAAC...TTTTCTCTCGTTACTCAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR CCA 90 bp TCACACTTTTTAATGTTCAGCAAAATCCTAGTGAGCTGCCGAAATGAATTCTACGATACACTGCCTGCCTaGCCCTTCCCGTCGACCTGT +
Preference number: 4 (lower is better)
Translates to: SHFLMFSKILVSCRNEFYDTLPA*PFPSTC
Trigger: ACAGGTCGACGGGAAGGGCCAGGCAGGCAGTGTATC...GTAGAATTCATTTCGGCAGCTCACTAGGATTTTGCTGAACATTAAAAAGTGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358755.5
ENST00000522484.5
ENST00000522566.5
CDS-3UTR CCA 90 bp ATTCTTACAAAACAGTGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGGATACACTGCCTGCCTaGCCCTTCCCGTCGACCTGT +
Preference number: 4 (lower is better)
Translates to: ILTKQCIGHFQCNTNLLLDTLPA*PFPSTC
Trigger: ACAGGTCGACGGGAAGGGCCAGGCAGGCAGTGTATC...CAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCACTGTTTTGTAAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR CCA 90 bp GCAAAAGAAGAATGTAACAGTGATTCTTACAAAACAGTGCATAGGTCACTTCCAGATACACTGCCTGCCTaGCCCTTCCCGTCGACCTGT +
Preference number: 4 (lower is better)
Translates to: AKEECNSDSYKTVHRSLPDTLPA*PFPSTC
Trigger: ACAGGTCGACGGGAAGGGCCAGGCAGGCAGTGTATC...TGGAAGTGACCTATGCACTGTTTTGTAAGAATCACTGTTACATTCTTCTTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR CCA 90 bp AGTAATTGCTACTGCAGAAGTGCCATGATTTGCTGTAGCTCCTGTGCTGGTTCCTTGGTTCTGAAGAACTaGGGACCTGCAAATTGTTGC +
Preference number: 4 (lower is better)
Translates to: SNCYCRSAMICCSSCAGSLVLKN*GPANCC
Trigger: GCAACAATTTGCAGGTCCCCAGTTCTTCAGAACCAA...GGAACCAGCACAGGAGCTACAGCAAATCATGGCACTTCTGCAGTAGCAATTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
3UTR CAA 72 bp CATCTTAGCTGTAGCATGTTTCCTTACAGCCTGAGCTaGAATTCTAGCCCACCTGGCGATTCTATGAGCTAC +
Preference number: 4 (lower is better)
Translates to: HLSCSMFPYSLS*NSSPPGDSMSY
Trigger: GTAGCTCATAGAATCGCCAGGTGGGCTAGAATTCAAGCTCAGGCTGTAAGGAAACATGCTACAGCTAAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521195.1
CDS-3UTR TCA 90 bp GCACAGTGGCAAGAGTACAAAGTAGCGAGAAGCATCCAGGTCATAAAGGCCAACAGTTTCAATGTTTGGTaGACATTCCAGATTTGCGAG +
Preference number: 4 (lower is better)
Translates to: AQWQEYKVARSIQVIKANSFNVW*TFQICE
Trigger: CTCGCAAATCTGGAATGTTCACCAAACATTGAAACT...GTTGGCCTTTATGACCTGGATGCTTCTCGCTACTTTGTACTCTTGCCACTGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521195.1
ENST00000523933.5
CDS-3UTR TCA 90 bp CTGATAAGGACATGGGATATGGTACTGACGACAATGATCAGAGACCCAAGTTATCCCCATGCAACAGCATaGAACCACACTGCTTTTTGC +
Preference number: 4 (lower is better)
Translates to: LIRTWDMVLTTMIRDPSYPHATA*NHTAFC
Trigger: GCAAAAAGCAGTGTGGTTTCATGCTGTTGCATGGGG...ATAACTTGGGTCTCTGATCATTGTCGTCAGTACCATATCCCATGTCCTTATCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000523933.5
CDS-3UTR TCA 90 bp CACAAAGGCACAGTGGCAAGAGTACAAAGTAGCGAGAAGCATCCAGGTCATAAACAAGATACAAGCCGCTaGAGACTCCAATTCGAATCA +
Preference number: 4 (lower is better)
Translates to: HKGTVARVQSSEKHPGHKQDTSR*RLQFES
Trigger: TGATTCGAATTGGAGTCTTCAGCGGCTTGTATCTTG...TTTATGACCTGGATGCTTCTCGCTACTTTGTACTCTTGCCACTGTGCCTTTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000523933.5
CDS-3UTR TCA 90 bp TGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGAGTAACGAGAGAAAAGAGGCTGCTTGGTTCTaGAGAACTGGGGACCTGCAA +
Preference number: 4 (lower is better)
Translates to: CIGHFQCNTNLLLSNERKEAAWF*RTGDLQ
Trigger: TTGCAGGTCCCCAGTTCTTCAGAACCAAGCAGCCTC...TTTTCTCTCGTTACTCAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR TCA 90 bp AGGACATGGGATATGGTACTGACGACAATGATCAGAGACCCAAGTTATCTCCCATGTTCTTCAAGTATCTaGATGACAACCACCTCCCTG +
Preference number: 4 (lower is better)
Translates to: RTWDMVLTTMIRDPSYLPCSSSI*MTTTSL
Trigger: CAGGGAGGTGGTTGTCATTCAGATACTTGAAGAACA...TGGGAGATAACTTGGGTCTCTGATCATTGTCGTCAGTACCATATCCCATGTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519011.5
ENST00000521195.1
CDS-3UTR GCA 90 bp TCCCCCAGAAGTCTTAAGATGCCTTGGACACCAAAATCCAATGTCTCTTTGGACCCTTATTGCAGGCTGTaGTATCGCCTAGCAAAAATC +
Preference number: 4 (lower is better)
Translates to: SPRSLKMPWTPKSNVSLDPYCRL*YRLAKI
Trigger: GATTTTTGCTAGGCGATAGCACAGCCTGCAATAAGG...GTCCAAAGAGACATTGGATTTTGGTGTCCAAGGCATCTTAAGACTTCTGGGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000521195.1
CDS-3UTR GCA 90 bp GTACAAAGTAGCGAGAAGCATCCAGGTCATAAAGGCCAACAAAGCAAACTCCACAACCACACTGCTTTTTaGTCGATGGCTTCACAACTC +
Preference number: 4 (lower is better)
Translates to: VQSSEKHPGHKGQQSKLHNHTAF*SMASQL
Trigger: GAGTTGTGAAGCCATCGAGCAAAAAGCAGTGTGGTT...GTGGAGTTTGCTTTGTTGGCCTTTATGACCTGGATGCTTCTCGCTACTTTGTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000523933.5
CDS-3UTR GCA 90 bp TCCCCCAGAAGTCTTAAGATGCCTTGGACACCAAAATCCAATGTCTCTTTGGACAACCACACTGCTTTTTaGTCGATGGCTTCACAACTC +
Preference number: 4 (lower is better)
Translates to: SPRSLKMPWTPKSNVSLDNHTAF*SMASQL
Trigger: GAGTTGTGAAGCCATCGAGCAAAAAGCAGTGTGGTT...GTCCAAAGAGACATTGGATTTTGGTGTCCAAGGCATCTTAAGACTTCTGGGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000521195.1
CDS-3UTR GCA 90 bp AGGACATGGGATATGGTACTGACGACAATGATCAGAGACCCAAGTTATCTCCCAACCCAGCCCATTCTGTaGATGTCTTTTTGCTTCCAA +
Preference number: 4 (lower is better)
Translates to: RTWDMVLTTMIRDPSYLPTQPIL*MSFCFQ
Trigger: TTGGAAGCAAAAAGACATGCACAGAATGGGCTGGGT...TGGGAGATAACTTGGGTCTCTGATCATTGTCGTCAGTACCATATCCCATGTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000523933.5
CDS-3UTR GCA 90 bp GACCCAAGTTATCTCCCAGGTAATCCTGTTCACTTGCTCATAGACGTAACATCCACCCAGCCCATTCTGTaGATGTCTTTTTGCTTCCAA +
Preference number: 4 (lower is better)
Translates to: DPSYLPGNPVHLLIDVTSTQPIL*MSFCFQ
Trigger: TTGGAAGCAAAAAGACATGCACAGAATGGGCTGGGT...GGATGTTACGTCTATGAGCAAGTGAACAGGATTACCTGGGAGATAACTTGGGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000523933.5
CDS-3UTR GCA 90 bp ATCATGGCTAGTAATTGCTACTGCAGAAGTGCCATGATTTGCTGTAGCTCCTGTAGAAGTGCCATGATTTaGTGTAGCTCCTGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: IMASNCYCRSAMICCSSCRSAMI*CSSCAG
Trigger: ACCAGCACAGGAGCTACAGCAAATCATGGCACTTCT...ACAGGAGCTACAGCAAATCATGGCACTTCTGCAGTAGCAATTACTAGCCATGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000523933.5
CDS-3UTR GCA 90 bp GCCATGATTTGCTGTAGCTCCTGTGCTGGTTCCCATGGATTTGGAAATGACCTTGCTAGTAATTGCTACTaGAGAAGTGCCATGATTTGC +
Preference number: 4 (lower is better)
Translates to: AMICCSSCAGSHGFGNDLASNCY*RSAMIC
Trigger: GCAAATCATGGCACTTCTGCAGTAGCAATTACTAGC...AAGGTCATTTCCAAATCCATGGGAACCAGCACAGGAGCTACAGCAAATCATGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000523933.5
CDS-3UTR GCA 90 bp AAACACACAAAGGCACAGTGGCAAGAGTACAAAGTAGCGAGAAGCATCCAGGTCATCATGGCTAGTAATTaGTACTGCAGAAGTGCCATG +
Preference number: 4 (lower is better)
Translates to: KHTKAQWQEYKVARSIQVIMASN*YCRSAM
Trigger: CATGGCACTTCTGCAGTAGCAATTACTAGCCATGAT...GACCTGGATGCTTCTCGCTACTTTGTACTCTTGCCACTGTGCCTTTGTGTGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000523933.5
CDS-3UTR GCA 90 bp GCAAAAGAAGAATGTAACAGTGATTCTTACAAAACAGTGCATAGGTCACTTCCATCTGGAGATGGATGCTaGTGGCGAGGCAGGTTCACC +
Preference number: 4 (lower is better)
Translates to: AKEECNSDSYKTVHRSLPSGDGC*WRGRFT
Trigger: GGTGAACCTGCCTCGCCAGCAGCATCCATCTCCAGA...TGGAAGTGACCTATGCACTGTTTTGTAAGAATCACTGTTACATTCTTCTTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR GCA 90 bp TCACACTTTTTAATGTTCAGCAAAATCCTAGTGAGCTGCCGAAATGAATTCTACGAGTCTGGAGATGGATaGTGCTGGCGAGGCAGGTTC +
Preference number: 4 (lower is better)
Translates to: SHFLMFSKILVSCRNEFYESGDG*CWRGRF
Trigger: GAACCTGCCTCGCCAGCAGCATCCATCTCCAGACTC...GTAGAATTCATTTCGGCAGCTCACTAGGATTTTGCTGAACATTAAAAAGTGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358755.5
ENST00000522484.5
ENST00000522566.5
CDS-3UTR GCA 90 bp ATTCTTACAAAACAGTGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGGAGTCTGGAGATGGATaGTGCTGGCGAGGCAGGTTC +
Preference number: 4 (lower is better)
Translates to: ILTKQCIGHFQCNTNLLLESGDG*CWRGRF
Trigger: GAACCTGCCTCGCCAGCAGCATCCATCTCCAGACTC...CAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCACTGTTTTGTAAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR GCA 90 bp ATTCTTACAAAACAGTGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGTTCAGATACACTGCCTaGCTGGCCCTTCCCGTCGAC +
Preference number: 4 (lower is better)
Translates to: ILTKQCIGHFQCNTNLLLFRYTA*LALPVD
Trigger: GTCGACGGGAAGGGCCAGGCAGGCAGTGTATCTGAA...CAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCACTGTTTTGTAAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR GCA 90 bp GCACTAATATCGCTATCACACTTTTTAATGTTCAGCAAAATCCTAGTGAGCTGCCACTTTCAGATACACTaGCTGCCTGGCCCTTCCCGT +
Preference number: 4 (lower is better)
Translates to: ALISLSHFLMFSKILVSCHFQIH*LPGPSR
Trigger: ACGGGAAGGGCCAGGCAGGCAGTGTATCTGAAAGTG...GCAGCTCACTAGGATTTTGCTGAACATTAAAAAGTGTGATAGCGATATTAGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358755.5
ENST00000522484.5
ENST00000522566.5
CDS-3UTR GCA 90 bp TGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGAGTAACGAGAGAAAACACTTTCAGATACACTaGCTGCCTGGCCCTTCCCGT +
Preference number: 4 (lower is better)
Translates to: CIGHFQCNTNLLLSNERKHFQIH*LPGPSR
Trigger: ACGGGAAGGGCCAGGCAGGCAGTGTATCTGAAAGTG...TTTTCTCTCGTTACTCAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR CCA 90 bp GCCATGATTTGCTGTAGCTCCTGTGCTGGTTCCCATGGATTTGGAAATGACCTTCTGCTTTTTGCTCGATaGCTTCACAACTCCATTTTC +
Preference number: 4 (lower is better)
Translates to: AMICCSSCAGSHGFGNDLLLFAR*LHNSIF
Trigger: GAAAATGGAGTTGTGAAGCCATCGAGCAAAAAGCAG...AAGGTCATTTCCAAATCCATGGGAACCAGCACAGGAGCTACAGCAAATCATGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000521195.1
ENST00000522484.5
ENST00000523933.5
CDS-3UTR CCA 90 bp AGTAATTGCTACTGCAGAAGTGCCATGATTTGCTGTAGCTCCTGTGCTGGTTCCCTGCTTTTTGCTCGATaGCTTCACAACTCCATTTTC +
Preference number: 4 (lower is better)
Translates to: SNCYCRSAMICCSSCAGSLLFAR*LHNSIF
Trigger: GAAAATGGAGTTGTGAAGCCATCGAGCAAAAAGCAG...GGAACCAGCACAGGAGCTACAGCAAATCATGGCACTTCTGCAGTAGCAATTACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000521195.1
ENST00000522484.5
ENST00000523933.5
CDS-3UTR CCA 90 bp ACCTGGTGTTCCCCATGCAACAGCATGAAACCACACTGCTTTTTGCTCGATGGCTTCTTTAGTTTTTCTTaGTTCCGGCCATCATGTTGT +
Preference number: 4 (lower is better)
Translates to: TWCSPCNSMKPHCFLLDGFFSFS*FRPSCC
Trigger: ACAACATGATGGCCGGAACCAAGAAAAACTAAAGAA...GCCATCGAGCAAAAAGCAGTGTGGTTTCATGCTGTTGCATGGGGAACACCAGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000523933.5
CDS-3UTR CCA 90 bp TGTTCTCTTAACCTGGGGGTGCTAGCTCCGTCCGCTTTCACCTCTCTCATTGATTTCTTTAGTTTTTCTTaGTTCCGGCCATCATGTTGT +
Preference number: 4 (lower is better)
Translates to: CSLNLGVLAPSAFTSLIDFFSFS*FRPSCC
Trigger: ACAACATGATGGCCGGAACCAAGAAAAACTAAAGAA...ATCAATGAGAGAGGTGAAAGCGGACGGAGCTAGCACCCCCAGGTTAAGAGAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000523933.5
CDS-3UTR CCA 90 bp GTAGCTCCTGTGCTGGTTCCCATGGATTTGGAAATGACCTTCAGCTTGTGTGAATCGACTTTCACTGATTaGATCTCTCTTGCGATTTCG +
Preference number: 4 (lower is better)
Translates to: VAPVLVPMDLEMTFSLCESTFTD*ISLAIS
Trigger: CGAAATCGCAAGAGAGATCCAATCAGTGAAAGTCGA...TTCACACAAGCTGAAGGTCATTTCCAAATCCATGGGAACCAGCACAGGAGCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000523933.5
CDS-3UTR CCA 90 bp TTTGGACTAATCCTTCCTTCACTCCGCGCACTTTCAGATACACTGCCTGCCTGGGTTTCTGGTGAGGTTTaGATTTCTGTCAAAGTTTCT +
Preference number: 4 (lower is better)
Translates to: FGLILPSLRALSDTLPAWVSGEV*ISVKVS
Trigger: AGAAACTTTGACAGAAATCCAAACCTCACCAGAAAC...CCAGGCAGGCAGTGTATCTGAAAGTGCGCGGAGTGAAGGAAGGATTAGTCCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
CDS-3UTR CCA 90 bp GCAAAAGAAGAATGTAACAGTGATTCTTACAAAACAGTGCATAGGTCACTTCCAGGAGATGGATGCTGCTaGCGAGGCAGGTTCACCACA +
Preference number: 4 (lower is better)
Translates to: AKEECNSDSYKTVHRSLPGDGCC*RGRFTT
Trigger: TGTGGTGAACCTGCCTCGCCAGCAGCATCCATCTCC...TGGAAGTGACCTATGCACTGTTTTGTAAGAATCACTGTTACATTCTTCTTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR CCA 90 bp TCACACTTTTTAATGTTCAGCAAAATCCTAGTGAGCTGCCGAAATGAATTCTACGGAGATGGATGCTGCTaGCGAGGCAGGTTCACCACA +
Preference number: 4 (lower is better)
Translates to: SHFLMFSKILVSCRNEFYGDGCC*RGRFTT
Trigger: TGTGGTGAACCTGCCTCGCCAGCAGCATCCATCTCC...GTAGAATTCATTTCGGCAGCTCACTAGGATTTTGCTGAACATTAAAAAGTGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358755.5
ENST00000522484.5
ENST00000522566.5
CDS-3UTR CCA 90 bp GCAAAAGAAGAATGTAACAGTGATTCTTACAAAACAGTGCATAGGTCACTTCCACAGAGAGTCTGGAGATaGATGCTGCTGGCGAGGCAG +
Preference number: 4 (lower is better)
Translates to: AKEECNSDSYKTVHRSLPQRVWR*MLLARQ
Trigger: CTGCCTCGCCAGCAGCATCCATCTCCAGACTCTCTG...TGGAAGTGACCTATGCACTGTTTTGTAAGAATCACTGTTACATTCTTCTTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR CCA 90 bp ATTCTTACAAAACAGTGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGCAGAGAGTCTGGAGATaGATGCTGCTGGCGAGGCAG +
Preference number: 4 (lower is better)
Translates to: ILTKQCIGHFQCNTNLLLQRVWR*MLLARQ
Trigger: CTGCCTCGCCAGCAGCATCCATCTCCAGACTCTCTG...CAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCACTGTTTTGTAAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR CCA 90 bp ATTCTTACAAAACAGTGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGGTTCCCCAGAGAGTCTaGAGATGGATGCTGCTGGCG +
Preference number: 4 (lower is better)
Translates to: ILTKQCIGHFQCNTNLLLVPQRV*RWMLLA
Trigger: CGCCAGCAGCATCCATCTCCAGACTCTCTGGGGAAC...CAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCACTGTTTTGTAAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR CCA 90 bp ATGATTTGCTGTAGCTCCTGTGCTGGTTCCCATGGATTTGGAAATGACCTTCAGTTGGTTCTGAAGAACTaGGGACCTGCAAATTGTTGC +
Preference number: 4 (lower is better)
Translates to: MICCSSCAGSHGFGNDLQLVLKN*GPANCC
Trigger: GCAACAATTTGCAGGTCCCCAGTTCTTCAGAACCAA...CTGAAGGTCATTTCCAAATCCATGGGAACCAGCACAGGAGCTACAGCAAATCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
3UTR CAA 72 bp ACAGTGTCACCAAGTTCTAGCTTCTCATCTGCCTTATaGCAGGCTGTGCTATCGCCTAGCAAAAATCCAATG +
Preference number: 4 (lower is better)
Translates to: TVSPSSSFSSAL*QAVLSPSKNPM
Trigger: CATTGGATTTTTGCTAGGCGATAGCACAGCCTGCAATAAGGCAGATGAGAAGCTAGAACTTGGTGACACTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521195.1
CDS-3UTR TCA 90 bp TGCCAGCTAAAAGAAGAGAGAGCCCAACAAACACACAAAGGCACAGTGGCAAGAAGTTTCAATGTTTGGTaGACATTCCAGATTTGCGAG +
Preference number: 4 (lower is better)
Translates to: CQLKEERAQQTHKGTVARSFNVW*TFQICE
Trigger: CTCGCAAATCTGGAATGTTCACCAAACATTGAAACT...TCTTGCCACTGTGCCTTTGTGTGTTTGTTGGGCTCTCTCTTCTTTTAGCTGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521195.1
ENST00000523933.5
CDS-3UTR TCA 90 bp GTAGCTCCTGTGCTGGTTCCCATGGATTTGGAAATGACCTTCAGCTTGTGTGAAAGTTTCAATGTTTGGTaGACATTCCAGATTTGCGAG +
Preference number: 4 (lower is better)
Translates to: VAPVLVPMDLEMTFSLCESFNVW*TFQICE
Trigger: CTCGCAAATCTGGAATGTTCACCAAACATTGAAACT...TTCACACAAGCTGAAGGTCATTTCCAAATCCATGGGAACCAGCACAGGAGCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000521195.1
ENST00000522484.5
ENST00000523933.5
CDS-3UTR TCA 90 bp TGGTCGAGCTTTTGCTTTTGCCTGATAAGGACATGGGATATGGTACTGACGACACAAGGTGGAACCACATaGATTTGTTCTATGCAGGTT +
Preference number: 4 (lower is better)
Translates to: WSSFCFCLIRTWDMVLTTQGGTT*ICSMQV
Trigger: AACCTGCATAGAACAAATTCATGTGGTTCCACCTTG...TGTCGTCAGTACCATATCCCATGTCCTTATCAGGCAAAAGCAAAAGCTCGACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521195.1
ENST00000523933.5
CDS-3UTR TCA 90 bp CTGATAAGGACATGGGATATGGTACTGACGACAATGATCAGAGACCCAAGTTATGTGCAAGCCTTATTTTaGGAGCCTAGGACAACAGTG +
Preference number: 4 (lower is better)
Translates to: LIRTWDMVLTTMIRDPSYVQALF*EPRTTV
Trigger: CACTGTTGTCCTAGGCTCTCAAAATAAGGCTTGCAC...ATAACTTGGGTCTCTGATCATTGTCGTCAGTACCATATCCCATGTCCTTATCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521195.1
CDS-3UTR TCA 90 bp AAACAGTGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGAGTAACGAGCCCCATGCAACAGCATaGAACCACACTGCTTTTTGC +
Preference number: 4 (lower is better)
Translates to: KQCIGHFQCNTNLLLSNEPHATA*NHTAFC
Trigger: GCAAAAAGCAGTGTGGTTTCATGCTGTTGCATGGGG...CTCGTTACTCAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCACTGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR TCA 90 bp GCCATGATTTGCTGTAGCTCCTGTGCTGGTTCCCATGGATTTGGAAATGACCTTGGCCATCATGTTGTATaGCTTGTCGAACATGATTTA +
Preference number: 4 (lower is better)
Translates to: AMICCSSCAGSHGFGNDLGHHVV*LVEHDL
Trigger: TAAATCATGTTCGACAAGTCATACAACATGATGGCC...AAGGTCATTTCCAAATCCATGGGAACCAGCACAGGAGCTACAGCAAATCATGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000523933.5
CDS-3UTR TCA 90 bp GCAAAAGAAGAATGTAACAGTGATTCTTACAAAACAGTGCATAGGTCACTTCCAGAGGCTGCTTGGTTCTaGAGAACTGGGGACCTGCAA +
Preference number: 4 (lower is better)
Translates to: AKEECNSDSYKTVHRSLPEAAWF*RTGDLQ
Trigger: TTGCAGGTCCCCAGTTCTTCAGAACCAAGCAGCCTC...TGGAAGTGACCTATGCACTGTTTTGTAAGAATCACTGTTACATTCTTCTTTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR TCA 90 bp TCACACTTTTTAATGTTCAGCAAAATCCTAGTGAGCTGCCGAAATGAATTCTACGAGGCTGCTTGGTTCTaGAGAACTGGGGACCTGCAA +
Preference number: 4 (lower is better)
Translates to: SHFLMFSKILVSCRNEFYEAAWF*RTGDLQ
Trigger: TTGCAGGTCCCCAGTTCTTCAGAACCAAGCAGCCTC...GTAGAATTCATTTCGGCAGCTCACTAGGATTTTGCTGAACATTAAAAAGTGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358755.5
ENST00000522484.5
ENST00000522566.5
CDS-3UTR GCA 90 bp TGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGAGTAACGAGAGAAAACAGGTGAAGAGACTGTaGCCTCTTAGGAGGGGTAGA +
Preference number: 4 (lower is better)
Translates to: CIGHFQCNTNLLLSNERKQVKRL*PLRRGR
Trigger: TCTACCCCTCCTAAGAGGGCACAGTCTCTTCACCTG...TTTTCTCTCGTTACTCAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
CDS-3UTR GCA 90 bp TGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGAGTAACGAGAGAAAAGCGAGAGGAAGAAAATaGTCCATTTCCACCGCGGCA +
Preference number: 4 (lower is better)
Translates to: CIGHFQCNTNLLLSNERKARGRK*SISTAA
Trigger: TGCCGCGGTGGAAATGGAGCATTTTCTTCCTCTCGC...TTTTCTCTCGTTACTCAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358755.5
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR GCA 90 bp GCACTAATATCGCTATCACACTTTTTAATGTTCAGCAAAATCCTAGTGAGCTGCGCGAGAGGAAGAAAATaGTCCATTTCCACCGCGGCA +
Preference number: 4 (lower is better)
Translates to: ALISLSHFLMFSKILVSCARGRK*SISTAA
Trigger: TGCCGCGGTGGAAATGGAGCATTTTCTTCCTCTCGC...GCAGCTCACTAGGATTTTGCTGAACATTAAAAAGTGTGATAGCGATATTAGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358755.5
ENST00000522484.5
ENST00000522566.5
CDS-3UTR GCA 90 bp AAACAGTGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGAGTAACGAGACCTGGTGTTCCCCATaGAACAGCATGAAACCACAC +
Preference number: 4 (lower is better)
Translates to: KQCIGHFQCNTNLLLSNETWCSP*NSMKPH
Trigger: GTGTGGTTTCATGCTGTTGCATGGGGAACACCAGGT...CTCGTTACTCAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCACTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR GCA 90 bp GTACAAAGTAGCGAGAAGCATCCAGGTCATAAAGGCCAACAAAGCAAACTCCACTCGAGCTTTTGCTTTTaGCTGATAAGGACATGGGAT +
Preference number: 4 (lower is better)
Translates to: VQSSEKHPGHKGQQSKLHSSFCF*LIRTWD
Trigger: ATCCCATGTCCTTATCAGGCAAAAGCAAAAGCTCGA...GTGGAGTTTGCTTTGTTGGCCTTTATGACCTGGATGCTTCTCGCTACTTTGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000523933.5
CDS-3UTR GCA 90 bp AGGACATGGGATATGGTACTGACGACAATGATCAGAGACCCAAGTTATCTCCCATTCTGGTCGAGCTTTTaGTTTTGCCTGATAAGGACA +
Preference number: 4 (lower is better)
Translates to: RTWDMVLTTMIRDPSYLPFWSSF*FCLIRT
Trigger: TGTCCTTATCAGGCAAAAGCAAAAGCTCGACCAGAA...TGGGAGATAACTTGGGTCTCTGATCATTGTCGTCAGTACCATATCCCATGTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000523933.5
CDS-3UTR GCA 90 bp AGGACATGGGATATGGTACTGACGACAATGATCAGAGACCCAAGTTATCTCCCAGCTAGTAATTGCTACTaGAGAAGTGCCATGATTTGC +
Preference number: 4 (lower is better)
Translates to: RTWDMVLTTMIRDPSYLPASNCY*RSAMIC
Trigger: GCAAATCATGGCACTTCTGCAGTAGCAATTACTAGC...TGGGAGATAACTTGGGTCTCTGATCATTGTCGTCAGTACCATATCCCATGTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000523933.5
CDS-3UTR GCA 90 bp CACAAAGGCACAGTGGCAAGAGTACAAAGTAGCGAGAAGCATCCAGGTCATAAAATCATGGCTAGTAATTaGTACTGCAGAAGTGCCATG +
Preference number: 4 (lower is better)
Translates to: HKGTVARVQSSEKHPGHKIMASN*YCRSAM
Trigger: CATGGCACTTCTGCAGTAGCAATTACTAGCCATGAT...TTTATGACCTGGATGCTTCTCGCTACTTTGTACTCTTGCCACTGTGCCTTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000523933.5
CDS-3UTR GCA 90 bp ATTCTTACAAAACAGTGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGCACTTTCAGATACACTaGCTGCCTGGCCCTTCCCGT +
Preference number: 4 (lower is better)
Translates to: ILTKQCIGHFQCNTNLLLHFQIH*LPGPSR
Trigger: ACGGGAAGGGCCAGGCAGGCAGTGTATCTGAAAGTG...CAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCACTGTTTTGTAAGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR GCA 90 bp TCACACTTTTTAATGTTCAGCAAAATCCTAGTGAGCTGCCGAAATGAATTCTACCACTTTCAGATACACTaGCTGCCTGGCCCTTCCCGT +
Preference number: 4 (lower is better)
Translates to: SHFLMFSKILVSCRNEFYHFQIH*LPGPSR
Trigger: ACGGGAAGGGCCAGGCAGGCAGTGTATCTGAAAGTG...GTAGAATTCATTTCGGCAGCTCACTAGGATTTTGCTGAACATTAAAAAGTGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358755.5
ENST00000522484.5
ENST00000522566.5
CDS-3UTR GCA 90 bp GCACTAATATCGCTATCACACTTTTTAATGTTCAGCAAAATCCTAGTGAGCTGCGGACCTGCAAATTGTTaGTCTGTGCCAGGCCAGTGT +
Preference number: 4 (lower is better)
Translates to: ALISLSHFLMFSKILVSCGPANC*SVPGQC
Trigger: ACACTGGCCTGGCACAGAGCAACAATTTGCAGGTCC...GCAGCTCACTAGGATTTTGCTGAACATTAAAAAGTGTGATAGCGATATTAGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358755.5
ENST00000522484.5
ENST00000522566.5
CDS-3UTR GCA 90 bp TGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGAGTAACGAGAGAAAAGGACCTGCAAATTGTTaGTCTGTGCCAGGCCAGTGT +
Preference number: 4 (lower is better)
Translates to: CIGHFQCNTNLLLSNERKGPANC*SVPGQC
Trigger: ACACTGGCCTGGCACAGAGCAACAATTTGCAGGTCC...TTTTCTCTCGTTACTCAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR GCA 90 bp AAACAGTGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGAGTAACGAGGAAGAACTGGGGACCTaGAAATTGTTGCTCTGTGCC +
Preference number: 4 (lower is better)
Translates to: KQCIGHFQCNTNLLLSNEEELGT*KLLLCA
Trigger: GGCACAGAGCAACAATTTGCAGGTCCCCAGTTCTTC...CTCGTTACTCAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCACTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR CCA 90 bp GCACAGTGGCAAGAGTACAAAGTAGCGAGAAGCATCCAGGTCATAAAGGCCAACAAGTTTACGACAAGGTaGAACCACATGAATTTGTTC +
Preference number: 4 (lower is better)
Translates to: AQWQEYKVARSIQVIKANKFTTR*NHMNLF
Trigger: GAACAAATTCATGTGGTTCCACCTTGTCGTAAACTT...GTTGGCCTTTATGACCTGGATGCTTCTCGCTACTTTGTACTCTTGCCACTGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521195.1
ENST00000523933.5
CDS-3UTR CCA 90 bp CTGATAAGGACATGGGATATGGTACTGACGACAATGATCAGAGACCCAAGTTATCATGGAGGCGCACACTaGTCAATTCCCAGAAACTTA +
Preference number: 4 (lower is better)
Translates to: LIRTWDMVLTTMIRDPSYHGGAH*SIPRNL
Trigger: TAAGTTTCTGGGAATTGACCAGTGTGCGCCTCCATG...ATAACTTGGGTCTCTGATCATTGTCGTCAGTACCATATCCCATGTCCTTATCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521195.1
CDS-3UTR CCA 90 bp AAACAGTGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGAGTAACGAGATACATGTTGGGGCATaGAGGCGCACACTGGTCAAT +
Preference number: 4 (lower is better)
Translates to: KQCIGHFQCNTNLLLSNEIHVGA*RRTLVN
Trigger: ATTGACCAGTGTGCGCCTCCATGCCCCAACATGTAT...CTCGTTACTCAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCACTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358755.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR CCA 90 bp CTGATAAGGACATGGGATATGGTACTGACGACAATGATCAGAGACCCAAGTTATCACACAAAGGCACAGTaGCAAGAGTACAAAGTAGCG +
Preference number: 4 (lower is better)
Translates to: LIRTWDMVLTTMIRDPSYHTKAQ*QEYKVA
Trigger: CGCTACTTTGTACTCTTGCCACTGTGCCTTTGTGTG...ATAACTTGGGTCTCTGATCATTGTCGTCAGTACCATATCCCATGTCCTTATCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000523933.5
CDS-3UTR CCA 90 bp CGAGAGAAAATGTTCTTCAAGTATCTGAATGACAACCACCTCCCTGCTCTTTTCCACACAAAGGCACAGTaGCAAGAGTACAAAGTAGCG +
Preference number: 4 (lower is better)
Translates to: REKMFFKYLNDNHLPALFHTKAQ*QEYKVA
Trigger: CGCTACTTTGTACTCTTGCCACTGTGCCTTTGTGTG...GAAAAGAGCAGGGAGGTGGTTGTCATTCAGATACTTGAAGAACATTTTCTCTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
CDS-3UTR CCA 90 bp ATGATTTGCTGTAGCTCCTGTGCTGGTTCCCATGGATTTGGAAATGACCTTCAGTCGACTTTCACTGATTaGATCTCTCTTGCGATTTCG +
Preference number: 4 (lower is better)
Translates to: MICCSSCAGSHGFGNDLQSTFTD*ISLAIS
Trigger: CGAAATCGCAAGAGAGATCCAATCAGTGAAAGTCGA...CTGAAGGTCATTTCCAAATCCATGGGAACCAGCACAGGAGCTACAGCAAATCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000523933.5
CDS-3UTR CCA 90 bp CACTTTTTAATGTTCAGCAAAATCCTAGTGAGCTGCCGAAATGAATTCTACAAACAGAGAGTCTGGAGATaGATGCTGCTGGCGAGGCAG +
Preference number: 4 (lower is better)
Translates to: HFLMFSKILVSCRNEFYKQRVWR*MLLARQ
Trigger: CTGCCTCGCCAGCAGCATCCATCTCCAGACTCTCTG...TTTGTAGAATTCATTTCGGCAGCTCACTAGGATTTTGCTGAACATTAAAAAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358755.5
ENST00000522484.5
ENST00000522566.5
CDS-3UTR TCA 90 bp AAACAGTGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGAGTAACGAGACCACATGGCTTGGATaGATCACTCTTTGCATCCTC +
Preference number: 4 (lower is better)
Translates to: KQCIGHFQCNTNLLLSNETTWLG*ITLCIL
Trigger: GAGGATGCAAAGAGTGATTCATCCAAGCCATGTGGT...CTCGTTACTCAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCACTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
CDS-3UTR TCA 90 bp TACAAAGTAGCGAGAAGCATCCAGGTCATAAAGGCCAACAAAGCAAACTCCACTCAAGGTGGAACCACATaGATTTGTTCTATGCAGGTT +
Preference number: 4 (lower is better)
Translates to: YKVARSIQVIKANKANSTQGGTT*ICSMQV
Trigger: AACCTGCATAGAACAAATTCATGTGGTTCCACCTTG...AGTGGAGTTTGCTTTGTTGGCCTTTATGACCTGGATGCTTCTCGCTACTTTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521195.1
ENST00000523933.5
CDS-3UTR TCA 90 bp TGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGAGTAACGAGAGAAAACCCCATGCAACAGCATaGAACCACACTGCTTTTTGC +
Preference number: 4 (lower is better)
Translates to: CIGHFQCNTNLLLSNERKPHATA*NHTAFC
Trigger: GCAAAAAGCAGTGTGGTTTCATGCTGTTGCATGGGG...TTTTCTCTCGTTACTCAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR TCA 90 bp TGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGAGTAACGAGAGAAAAGAGATGTGGAACCTTTaGGGCTGCTTGGTTCTGAAG +
Preference number: 4 (lower is better)
Translates to: CIGHFQCNTNLLLSNERKEMWNL*GCLVLK
Trigger: CTTCAGAACCAAGCAGCCTCAAAGGTTCCACATCTC...TTTTCTCTCGTTACTCAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR TCA 90 bp TGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGAGTAACGAGAGAAAACTCTTTTCTCACTCCTaGAACCGGGTGAACAAGCAG +
Preference number: 4 (lower is better)
Translates to: CIGHFQCNTNLLLSNERKLFSHS*NRVNKQ
Trigger: CTGCTTGTTCACCCGGTTTCAGGAGTGAGAAAAGAG...TTTTCTCTCGTTACTCAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR GCA 90 bp TCACACTTTTTAATGTTCAGCAAAATCCTAGTGAGCTGCCGAAATGAATTCTACCAGGTGAAGAGACTGTaGCCTCTTAGGAGGGGTAGA +
Preference number: 4 (lower is better)
Translates to: SHFLMFSKILVSCRNEFYQVKRL*PLRRGR
Trigger: TCTACCCCTCCTAAGAGGGCACAGTCTCTTCACCTG...GTAGAATTCATTTCGGCAGCTCACTAGGATTTTGCTGAACATTAAAAAGTGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358755.5
ENST00000522484.5
ENST00000522566.5
CDS-3UTR GCA 90 bp GCAAAAGAAGAATGTAACAGTGATTCTTACAAAACAGTGCATAGGTCACTTCCACAGGTGAAGAGACTGTaGCCTCTTAGGAGGGGTAGA +
Preference number: 4 (lower is better)
Translates to: AKEECNSDSYKTVHRSLPQVKRL*PLRRGR
Trigger: TCTACCCCTCCTAAGAGGGCACAGTCTCTTCACCTG...TGGAAGTGACCTATGCACTGTTTTGTAAGAATCACTGTTACATTCTTCTTTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
CDS-3UTR GCA 90 bp ATCATGGCTAGTAATTGCTACTGCAGAAGTGCCATGATTTGCTGTAGCTCCTGTCCAGAAGTCTTAAGATaGCTTGGACACCAAAATCCA +
Preference number: 4 (lower is better)
Translates to: IMASNCYCRSAMICCSSCPEVLR*LGHQNP
Trigger: TGGATTTTGGTGTCCAAGGCATCTTAAGACTTCTGG...ACAGGAGCTACAGCAAATCATGGCACTTCTGCAGTAGCAATTACTAGCCATGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521195.1
ENST00000522484.5
CDS-3UTR GCA 90 bp AAACAGTGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGAGTAACGAGAGAAGTGCCATGATTTaGTGTAGCTCCTGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: KQCIGHFQCNTNLLLSNERSAMI*CSSCAG
Trigger: ACCAGCACAGGAGCTACAGCAAATCATGGCACTTCT...CTCGTTACTCAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCACTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR GCA 90 bp ATTCTTACAAAACAGTGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGGGACCTGCAAATTGTTaGTCTGTGCCAGGCCAGTGT +
Preference number: 4 (lower is better)
Translates to: ILTKQCIGHFQCNTNLLLGPANC*SVPGQC
Trigger: ACACTGGCCTGGCACAGAGCAACAATTTGCAGGTCC...CAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCACTGTTTTGTAAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR GCA 90 bp TGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGAGTAACGAGAGAAAAGAAGAACTGGGGACCTaGAAATTGTTGCTCTGTGCC +
Preference number: 4 (lower is better)
Translates to: CIGHFQCNTNLLLSNERKEELGT*KLLLCA
Trigger: GGCACAGAGCAACAATTTGCAGGTCCCCAGTTCTTC...TTTTCTCTCGTTACTCAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR CCA 90 bp TGCCAGCTAAAAGAAGAGAGAGCCCAACAAACACACAAAGGCACAGTGGCAAGATTTTACCACATGGCTTaGATGAATCACTCTTTGCAT +
Preference number: 4 (lower is better)
Translates to: CQLKEERAQQTHKGTVARFYHMA*MNHSLH
Trigger: ATGCAAAGAGTGATTCATCCAAGCCATGTGGTAAAA...TCTTGCCACTGTGCCTTTGTGTGTTTGTTGGGCTCTCTCTTCTTTTAGCTGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519011.5
ENST00000521195.1
CDS-3UTR CCA 90 bp AAAATGCTGTGCCAGCATCTTAGCTGTAGCATGTTTCCTTACAGCCTGAGCTTGTTGTTCTATGCAGGTTaGTACAAATGCTTTGCAGAG +
Preference number: 4 (lower is better)
Translates to: KMLCQHLSCSMFPYSLSLLFYAG*YKCFAE
Trigger: CTCTGCAAAGCATTTGTACCAACCTGCATAGAACAA...CAAGCTCAGGCTGTAAGGAAACATGCTACAGCTAAGATGCTGGCACAGCATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521195.1
CDS-3UTR CCA 90 bp ATGATTTGCTGTAGCTCCTGTGCTGGTTCCCATGGATTTGGAAATGACCTTCAGTTGTTCTATGCAGGTTaGTACAAATGCTTTGCAGAG +
Preference number: 4 (lower is better)
Translates to: MICCSSCAGSHGFGNDLQLFYAG*YKCFAE
Trigger: CTCTGCAAAGCATTTGTACCAACCTGCATAGAACAA...CTGAAGGTCATTTCCAAATCCATGGGAACCAGCACAGGAGCTACAGCAAATCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000521195.1
ENST00000522484.5
ENST00000523933.5
CDS-3UTR CCA 90 bp TGGTCGAGCTTTTGCTTTTGCCTGATAAGGACATGGGATATGGTACTGACGACAAGTCTTAAGATGCCTTaGACACCAAAATCCAATGTC +
Preference number: 4 (lower is better)
Translates to: WSSFCFCLIRTWDMVLTTSLKMP*TPKSNV
Trigger: GACATTGGATTTTGGTGTCCAAGGCATCTTAAGACT...TGTCGTCAGTACCATATCCCATGTCCTTATCAGGCAAAAGCAAAAGCTCGACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000521195.1
CDS-3UTR CCA 90 bp GCACTAATATCGCTATCACACTTTTTAATGTTCAGCAAAATCCTAGTGAGCTGCATACATGTTGGGGCATaGAGGCGCACACTGGTCAAT +
Preference number: 4 (lower is better)
Translates to: ALISLSHFLMFSKILVSCIHVGA*RRTLVN
Trigger: ATTGACCAGTGTGCGCCTCCATGCCCCAACATGTAT...GCAGCTCACTAGGATTTTGCTGAACATTAAAAAGTGTGATAGCGATATTAGTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358755.5
ENST00000522484.5
ENST00000522566.5
CDS-3UTR CCA 90 bp TGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGAGTAACGAGAGAAAAAACAGTCAGGAAACCTaGTGTTCCCCATGCAACAGC +
Preference number: 4 (lower is better)
Translates to: CIGHFQCNTNLLLSNERKNSQET*CSPCNS
Trigger: GCTGTTGCATGGGGAACACCAGGTTTCCTGACTGTT...TTTTCTCTCGTTACTCAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR CCA 90 bp GCCATGATTTGCTGTAGCTCCTGTGCTGGTTCCCATGGATTTGGAAATGACCTTGTTTCTGGTGAGGTTTaGATTTCTGTCAAAGTTTCT +
Preference number: 4 (lower is better)
Translates to: AMICCSSCAGSHGFGNDLVSGEV*ISVKVS
Trigger: AGAAACTTTGACAGAAATCCAAACCTCACCAGAAAC...AAGGTCATTTCCAAATCCATGGGAACCAGCACAGGAGCTACAGCAAATCATGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000523933.5
CDS-3UTR CCA 90 bp GAGCTTTTGCTTTTGCCTGATAAGGACATGGGATATGGTACTGACGACAATGATCTGCTTTTTGCTCGATaGCTTCACAACTCCATTTCC +
Preference number: 4 (lower is better)
Translates to: ELLLLPDKDMGYGTDDNDLLFAR*LHNSIS
Trigger: GGAAATGGAGTTGTGAAGCCATCGAGCAAAAAGCAG...ATCATTGTCGTCAGTACCATATCCCATGTCCTTATCAGGCAAAAGCAAAAGCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000519011.5
CDS-3UTR CCA 90 bp TGCCAGCTAAAAGAAGAGAGAGCCCAACAAACACACAAAGGCACAGTGGCAAGAATACATCACATGGCTTaGATGAATCACTCTTTGCAT +
Preference number: 4 (lower is better)
Translates to: CQLKEERAQQTHKGTVARIHHMA*MNHSLH
Trigger: ATGCAAAGAGTGATTCATCCAAGCCATGTGATGTAT...TCTTGCCACTGTGCCTTTGTGTGTTTGTTGGGCTCTCTCTTCTTTTAGCTGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523933.5
CDS-3UTR TCA 90 bp GCACTAATATCGCTATCACACTTTTTAATGTTCAGCAAAATCCTAGTGAGCTGCACCACATGGCTTGGATaGATCACTCTTTGCATCCTC +
Preference number: 4 (lower is better)
Translates to: ALISLSHFLMFSKILVSCTTWLG*ITLCIL
Trigger: GAGGATGCAAAGAGTGATTCATCCAAGCCATGTGGT...GCAGCTCACTAGGATTTTGCTGAACATTAAAAAGTGTGATAGCGATATTAGTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358755.5
ENST00000522484.5
ENST00000522566.5
CDS-3UTR TCA 90 bp GCACTAATATCGCTATCACACTTTTTAATGTTCAGCAAAATCCTAGTGAGCTGCGTGCAAGCCTTATTTTaGGAGCCTAGGACAACAGTG +
Preference number: 4 (lower is better)
Translates to: ALISLSHFLMFSKILVSCVQALF*EPRTTV
Trigger: CACTGTTGTCCTAGGCTCTCAAAATAAGGCTTGCAC...GCAGCTCACTAGGATTTTGCTGAACATTAAAAAGTGTGATAGCGATATTAGTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358755.5
ENST00000522484.5
ENST00000522566.5
CDS-3UTR TCA 90 bp TCACACTTTTTAATGTTCAGCAAAATCCTAGTGAGCTGCCGAAATGAATTCTACCCCCATGCAACAGCATaGAACCACACTGCTTTTTGC +
Preference number: 4 (lower is better)
Translates to: SHFLMFSKILVSCRNEFYPHATA*NHTAFC
Trigger: GCAAAAAGCAGTGTGGTTTCATGCTGTTGCATGGGG...GTAGAATTCATTTCGGCAGCTCACTAGGATTTTGCTGAACATTAAAAAGTGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000358755.5
ENST00000522484.5
ENST00000522566.5
CDS-3UTR TCA 90 bp ATCATGGCTAGTAATTGCTACTGCAGAAGTGCCATGATTTGCTGTAGCTCCTGTGGCCATCATGTTGTATaGCTTGTCGAACATGATTTA +
Preference number: 4 (lower is better)
Translates to: IMASNCYCRSAMICCSSCGHHVV*LVEHDL
Trigger: TAAATCATGTTCGACAAGTCATACAACATGATGGCC...ACAGGAGCTACAGCAAATCATGGCACTTCTGCAGTAGCAATTACTAGCCATGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000523933.5
CDS-3UTR TCA 90 bp AAACAGTGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGAGTAACGAGCAAGATACAAGCCGCTaGAGACTCCAATTCGAATCA +
Preference number: 4 (lower is better)
Translates to: KQCIGHFQCNTNLLLSNEQDTSR*RLQFES
Trigger: TGATTCGAATTGGAGTCTTCAGCGGCTTGTATCTTG...CTCGTTACTCAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCACTGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR TCA 90 bp GCAAAAGAAGAATGTAACAGTGATTCTTACAAAACAGTGCATAGGTCACTTCCAACTGCAGAAGTGCCATaGTTTGCTGTAGCTCCTGTG +
Preference number: 4 (lower is better)
Translates to: AKEECNSDSYKTVHRSLPTAEVP*FAVAPV
Trigger: CACAGGAGCTACAGCAAATCATGGCACTTCTGCAGT...TGGAAGTGACCTATGCACTGTTTTGTAAGAATCACTGTTACATTCTTCTTTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR TCA 90 bp TCACACTTTTTAATGTTCAGCAAAATCCTAGTGAGCTGCCGAAATGAATTCTACACTGCAGAAGTGCCATaGTTTGCTGTAGCTCCTGTG +
Preference number: 4 (lower is better)
Translates to: SHFLMFSKILVSCRNEFYTAEVP*FAVAPV
Trigger: CACAGGAGCTACAGCAAATCATGGCACTTCTGCAGT...GTAGAATTCATTTCGGCAGCTCACTAGGATTTTGCTGAACATTAAAAAGTGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358755.5
ENST00000522484.5
ENST00000522566.5
CDS-3UTR TCA 90 bp ATTCTTACAAAACAGTGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGACTGCAGAAGTGCCATaGTTTGCTGTAGCTCCTGTG +
Preference number: 4 (lower is better)
Translates to: ILTKQCIGHFQCNTNLLLTAEVP*FAVAPV
Trigger: CACAGGAGCTACAGCAAATCATGGCACTTCTGCAGT...CAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCACTGTTTTGTAAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR TCA 90 bp ATTCTTACAAAACAGTGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGGAGATGTGGAACCTTTaGGGCTGCTTGGTTCTGAAG +
Preference number: 4 (lower is better)
Translates to: ILTKQCIGHFQCNTNLLLEMWNL*GCLVLK
Trigger: CTTCAGAACCAAGCAGCCTCAAAGGTTCCACATCTC...CAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCACTGTTTTGTAAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR TCA 90 bp GCAAAAGAAGAATGTAACAGTGATTCTTACAAAACAGTGCATAGGTCACTTCCAGAGATGTGGAACCTTTaGGGCTGCTTGGTTCTGAAG +
Preference number: 4 (lower is better)
Translates to: AKEECNSDSYKTVHRSLPEMWNL*GCLVLK
Trigger: CTTCAGAACCAAGCAGCCTCAAAGGTTCCACATCTC...TGGAAGTGACCTATGCACTGTTTTGTAAGAATCACTGTTACATTCTTCTTTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR TCA 90 bp ATTCTTACAAAACAGTGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGCTCTTTTCTCACTCCTaGAACCGGGTGAACAAGCAG +
Preference number: 4 (lower is better)
Translates to: ILTKQCIGHFQCNTNLLLLFSHS*NRVNKQ
Trigger: CTGCTTGTTCACCCGGTTTCAGGAGTGAGAAAAGAG...CAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCACTGTTTTGTAAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR TCA 90 bp TGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGAGTAACGAGAGAAAACTTCAAGTATCTGAATaGCAACCACCTCCCTGCTCT +
Preference number: 4 (lower is better)
Translates to: CIGHFQCNTNLLLSNERKLQVSE*QPPPCS
Trigger: AGAGCAGGGAGGTGGTTGTCATTCAGATACTTGAAG...TTTTCTCTCGTTACTCAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR GCA 90 bp TGCCAGGCCAGTGTCAGTAATATCACTCTTTGGACTAATCCTTCCTTCACTCCGTTGGTACAAATGCTTTaGAGAGGAAAGTTTCAATGT +
Preference number: 4 (lower is better)
Translates to: CQASVSNITLWTNPSFTPLVQML*RGKFQC
Trigger: ACATTGAAACTTTCCTCTGCAAAGCATTTGTACCAA...CGGAGTGAAGGAAGGATTAGTCCAAAGAGTGATATTACTGACACTGGCCTGGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521195.1
ENST00000522484.5
CDS-3UTR GCA 90 bp AAACAGTGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGAGTAACGAGAACCACACTGCTTTTTaGTCGATGGCTTCACAACTC +
Preference number: 4 (lower is better)
Translates to: KQCIGHFQCNTNLLLSNENHTAF*SMASQL
Trigger: GAGTTGTGAAGCCATCGAGCAAAAAGCAGTGTGGTT...CTCGTTACTCAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCACTGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR GCA 90 bp AAACAGTGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGAGTAACGAGAGCATGAAACCACACTaGTTTTTGCTCGATGGCTTC +
Preference number: 4 (lower is better)
Translates to: KQCIGHFQCNTNLLLSNESMKPH*FLLDGF
Trigger: GAAGCCATCGAGCAAAAAGCAGTGTGGTTTCATGCT...CTCGTTACTCAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCACTGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR GCA 90 bp GCAAAAGAAGAATGTAACAGTGATTCTTACAAAACAGTGCATAGGTCACTTCCAACCTGGTGTTCCCCATaGAACAGCATGAAACCACAC +
Preference number: 4 (lower is better)
Translates to: AKEECNSDSYKTVHRSLPTWCSP*NSMKPH
Trigger: GTGTGGTTTCATGCTGTTGCATGGGGAACACCAGGT...TGGAAGTGACCTATGCACTGTTTTGTAAGAATCACTGTTACATTCTTCTTTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR GCA 90 bp AAACAGTGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGAGTAACGAGACCCAGCCCATTCTGTaGATGTCTTTTTGCTTCCAA +
Preference number: 4 (lower is better)
Translates to: KQCIGHFQCNTNLLLSNETQPIL*MSFCFQ
Trigger: TTGGAAGCAAAAAGACATGCACAGAATGGGCTGGGT...CTCGTTACTCAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCACTGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522566.5
ENST00000523739.5
CDS-3UTR GCA 90 bp CACTTTTTAATGTTCAGCAAAATCCTAGTGAGCTGCCGAAATGAATTCTACAAAGGACCTGCAAATTGTTaGTCTGTGCCAGGCCAGTGT +
Preference number: 4 (lower is better)
Translates to: HFLMFSKILVSCRNEFYKGPANC*SVPGQC
Trigger: ACACTGGCCTGGCACAGAGCAACAATTTGCAGGTCC...TTTGTAGAATTCATTTCGGCAGCTCACTAGGATTTTGCTGAACATTAAAAAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358755.5
ENST00000522484.5
ENST00000522566.5
CDS-3UTR GCA 90 bp GCAAAAGAAGAATGTAACAGTGATTCTTACAAAACAGTGCATAGGTCACTTCCAGAAGAACTGGGGACCTaGAAATTGTTGCTCTGTGCC +
Preference number: 4 (lower is better)
Translates to: AKEECNSDSYKTVHRSLPEELGT*KLLLCA
Trigger: GGCACAGAGCAACAATTTGCAGGTCCCCAGTTCTTC...TGGAAGTGACCTATGCACTGTTTTGTAAGAATCACTGTTACATTCTTCTTTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR GCA 90 bp GTACAAAGTAGCGAGAAGCATCCAGGTCATAAAGGCCAACAAAGCAAACTCCACATTCTTACAAAACAGTaGATAGGTCACTTCCAGTGT +
Preference number: 4 (lower is better)
Translates to: VQSSEKHPGHKGQQSKLHILTKQ*IGHFQC
Trigger: ACACTGGAAGTGACCTATGCACTGTTTTGTAAGAAT...GTGGAGTTTGCTTTGTTGGCCTTTATGACCTGGATGCTTCTCGCTACTTTGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519011.5
ENST00000521195.1
CDS-3UTR CCA 90 bp GACCCAAGTTATCTCCCAGGTAATCCTGTTCACTTGCTCATAGACGTAACATCCAAGTTTACGACAAGGTaGAACCACATGAATTTGTTC +
Preference number: 4 (lower is better)
Translates to: DPSYLPGNPVHLLIDVTSKFTTR*NHMNLF
Trigger: GAACAAATTCATGTGGTTCCACCTTGTCGTAAACTT...GGATGTTACGTCTATGAGCAAGTGAACAGGATTACCTGGGAGATAACTTGGGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521195.1
ENST00000523933.5
CDS-3UTR CCA 90 bp TGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGAGTAACGAGAGAAAACATGGAGGCGCACACTaGTCAATTCCCAGAAACTTA +
Preference number: 4 (lower is better)
Translates to: CIGHFQCNTNLLLSNERKHGGAH*SIPRNL
Trigger: TAAGTTTCTGGGAATTGACCAGTGTGCGCCTCCATG...TTTTCTCTCGTTACTCAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358755.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR CCA 90 bp GCAAAAGAAGAATGTAACAGTGATTCTTACAAAACAGTGCATAGGTCACTTCCAATACATGTTGGGGCATaGAGGCGCACACTGGTCAAT +
Preference number: 4 (lower is better)
Translates to: AKEECNSDSYKTVHRSLPIHVGA*RRTLVN
Trigger: ATTGACCAGTGTGCGCCTCCATGCCCCAACATGTAT...TGGAAGTGACCTATGCACTGTTTTGTAAGAATCACTGTTACATTCTTCTTTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000358755.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR CCA 90 bp ATTCTTACAAAACAGTGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGAACAGTCAGGAAACCTaGTGTTCCCCATGCAACAGC +
Preference number: 4 (lower is better)
Translates to: ILTKQCIGHFQCNTNLLLNSQET*CSPCNS
Trigger: GCTGTTGCATGGGGAACACCAGGTTTCCTGACTGTT...CAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCACTGTTTTGTAAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR CCA 90 bp TCACACTTTTTAATGTTCAGCAAAATCCTAGTGAGCTGCCGAAATGAATTCTACAACAGTCAGGAAACCTaGTGTTCCCCATGCAACAGC +
Preference number: 4 (lower is better)
Translates to: SHFLMFSKILVSCRNEFYNSQET*CSPCNS
Trigger: GCTGTTGCATGGGGAACACCAGGTTTCCTGACTGTT...GTAGAATTCATTTCGGCAGCTCACTAGGATTTTGCTGAACATTAAAAAGTGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358755.5
ENST00000522484.5
ENST00000522566.5
CDS-3UTR CCA 90 bp TGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGAGTAACGAGAGAAAACACACAAAGGCACAGTaGCAAGAGTACAAAGTAGCG +
Preference number: 4 (lower is better)
Translates to: CIGHFQCNTNLLLSNERKHTKAQ*QEYKVA
Trigger: CGCTACTTTGTACTCTTGCCACTGTGCCTTTGTGTG...TTTTCTCTCGTTACTCAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR CCA 90 bp TTGCCTGATAAGGACATGGGATATGGTACTGACGACAATGATCAGAGACCCAAGTTCTTTAGTTTTTCTTaGTTCCGGCCATCATGTTGT +
Preference number: 4 (lower is better)
Translates to: LPDKDMGYGTDDNDQRPKFFSFS*FRPSCC
Trigger: ACAACATGATGGCCGGAACCAAGAAAAACTAAAGAA...CTTGGGTCTCTGATCATTGTCGTCAGTACCATATCCCATGTCCTTATCAGGCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000523933.5
CDS-3UTR CCA 90 bp ATGATTTGCTGTAGCTCCTGTGCTGGTTCCCATGGATTTGGAAATGACCTTCAGTTCTTTAGTTTTTCTTaGTTCCGGCCATCATGTTGT +
Preference number: 4 (lower is better)
Translates to: MICCSSCAGSHGFGNDLQFFSFS*FRPSCC
Trigger: ACAACATGATGGCCGGAACCAAGAAAAACTAAAGAA...CTGAAGGTCATTTCCAAATCCATGGGAACCAGCACAGGAGCTACAGCAAATCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000523933.5
CDS-3UTR CCA 90 bp AAACAGTGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGAGTAACGAGTGCCTGATAAGGACATaGGATATGGTACTGACGACA +
Preference number: 4 (lower is better)
Translates to: KQCIGHFQCNTNLLLSNECLIRT*DMVLTT
Trigger: TGTCGTCAGTACCATATCCCATGTCCTTATCAGGCA...CTCGTTACTCAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCACTGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522566.5
ENST00000523739.5
CDS-3UTR CCA 90 bp CACAAAGGCACAGTGGCAAGAGTACAAAGTAGCGAGAAGCATCCAGGTCATAAAGTTTCTGGTGAGGTTTaGATTTCTGTCAAAGTTTCT +
Preference number: 4 (lower is better)
Translates to: HKGTVARVQSSEKHPGHKVSGEV*ISVKVS
Trigger: AGAAACTTTGACAGAAATCCAAACCTCACCAGAAAC...TTTATGACCTGGATGCTTCTCGCTACTTTGTACTCTTGCCACTGTGCCTTTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000523933.5
CDS-3UTR TCA 90 bp ATCATGGCTAGTAATTGCTACTGCAGAAGTGCCATGATTTGCTGTAGCTCCTGTTTTTCTTCAAATTCCTaGTTTTACCACATGGCTTGG +
Preference number: 4 (lower is better)
Translates to: IMASNCYCRSAMICCSSCFSSNS*FYHMAW
Trigger: CCAAGCCATGTGGTAAAATCAGGAATTTGAAGAAAA...ACAGGAGCTACAGCAAATCATGGCACTTCTGCAGTAGCAATTACTAGCCATGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
CDS-3UTR TCA 90 bp GCAAAAGAAGAATGTAACAGTGATTCTTACAAAACAGTGCATAGGTCACTTCCAGTGCAAGCCTTATTTTaGGAGCCTAGGACAACAGTG +
Preference number: 4 (lower is better)
Translates to: AKEECNSDSYKTVHRSLPVQALF*EPRTTV
Trigger: CACTGTTGTCCTAGGCTCTCAAAATAAGGCTTGCAC...TGGAAGTGACCTATGCACTGTTTTGTAAGAATCACTGTTACATTCTTCTTTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000358755.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR TCA 90 bp CACTTTTTAATGTTCAGCAAAATCCTAGTGAGCTGCCGAAATGAATTCTACAAACTCTTTTCTCACTCCTaGAACCGGGTGAACAAGCAG +
Preference number: 4 (lower is better)
Translates to: HFLMFSKILVSCRNEFYKLFSHS*NRVNKQ
Trigger: CTGCTTGTTCACCCGGTTTCAGGAGTGAGAAAAGAG...TTTGTAGAATTCATTTCGGCAGCTCACTAGGATTTTGCTGAACATTAAAAAGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358755.5
ENST00000522484.5
ENST00000522566.5
CDS-3UTR TCA 90 bp TCACACTTTTTAATGTTCAGCAAAATCCTAGTGAGCTGCCGAAATGAATTCTACCTTCAAGTATCTGAATaGCAACCACCTCCCTGCTCT +
Preference number: 4 (lower is better)
Translates to: SHFLMFSKILVSCRNEFYLQVSE*QPPPCS
Trigger: AGAGCAGGGAGGTGGTTGTCATTCAGATACTTGAAG...GTAGAATTCATTTCGGCAGCTCACTAGGATTTTGCTGAACATTAAAAAGTGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358755.5
ENST00000522484.5
ENST00000522566.5
CDS-3UTR TCA 90 bp ATTCTTACAAAACAGTGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGCTTCAAGTATCTGAATaGCAACCACCTCCCTGCTCT +
Preference number: 4 (lower is better)
Translates to: ILTKQCIGHFQCNTNLLLLQVSE*QPPPCS
Trigger: AGAGCAGGGAGGTGGTTGTCATTCAGATACTTGAAG...CAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCACTGTTTTGTAAGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR TCA 90 bp TGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGAGTAACGAGAGAAAATGTTCTTCAAGTATCTaGATGACAACCACCTCCCTG +
Preference number: 4 (lower is better)
Translates to: CIGHFQCNTNLLLSNERKCSSSI*MTTTSL
Trigger: CAGGGAGGTGGTTGTCATTCAGATACTTGAAGAACA...TTTTCTCTCGTTACTCAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR GCA 90 bp AAACAGTGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGAGTAACGAGCCAGAAGTCTTAAGATaGCTTGGACACCAAAATCCA +
Preference number: 4 (lower is better)
Translates to: KQCIGHFQCNTNLLLSNEPEVLR*LGHQNP
Trigger: TGGATTTTGGTGTCCAAGGCATCTTAAGACTTCTGG...CTCGTTACTCAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCACTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358755.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR GCA 90 bp TGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGAGTAACGAGAGAAAACCTTATTGCAGGCTGTaGTATCGCCTAGCAAAAATC +
Preference number: 4 (lower is better)
Translates to: CIGHFQCNTNLLLSNERKPYCRL*YRLAKI
Trigger: GATTTTTGCTAGGCGATAGCACAGCCTGCAATAAGG...TTTTCTCTCGTTACTCAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358755.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR GCA 90 bp TGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGAGTAACGAGAGAAAAAACCACACTGCTTTTTaGTCGATGGCTTCACAACTC +
Preference number: 4 (lower is better)
Translates to: CIGHFQCNTNLLLSNERKNHTAF*SMASQL
Trigger: GAGTTGTGAAGCCATCGAGCAAAAAGCAGTGTGGTT...TTTTCTCTCGTTACTCAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR GCA 90 bp AAACAGTGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGAGTAACGAGTCGAGCTTTTGCTTTTaGCTGATAAGGACATGGGAT +
Preference number: 4 (lower is better)
Translates to: KQCIGHFQCNTNLLLSNESSFCF*LIRTWD
Trigger: ATCCCATGTCCTTATCAGGCAAAAGCAAAAGCTCGA...CTCGTTACTCAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCACTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522566.5
ENST00000523739.5
CDS-3UTR GCA 90 bp ATTCTTACAAAACAGTGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGAGAAGTGCCATGATTTaGTGTAGCTCCTGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: ILTKQCIGHFQCNTNLLLRSAMI*CSSCAG
Trigger: ACCAGCACAGGAGCTACAGCAAATCATGGCACTTCT...CAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCACTGTTTTGTAAGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR GCA 90 bp AAACAGTGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGAGTAACGAGGCTAGTAATTGCTACTaGAGAAGTGCCATGATTTGC +
Preference number: 4 (lower is better)
Translates to: KQCIGHFQCNTNLLLSNEASNCY*RSAMIC
Trigger: GCAAATCATGGCACTTCTGCAGTAGCAATTACTAGC...CTCGTTACTCAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCACTGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR GCA 90 bp TGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGAGTAACGAGAGAAAACAAATTGTTGCTCTGTaGCAGGCCAGTGTCAGTAAT +
Preference number: 4 (lower is better)
Translates to: CIGHFQCNTNLLLSNERKQIVAL*QASVSN
Trigger: ATTACTGACACTGGCCTGGCACAGAGCAACAATTTG...TTTTCTCTCGTTACTCAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR CCA 90 bp TCACACTTTTTAATGTTCAGCAAAATCCTAGTGAGCTGCCGAAATGAATTCTACCATGGAGGCGCACACTaGTCAATTCCCAGAAACTTA +
Preference number: 4 (lower is better)
Translates to: SHFLMFSKILVSCRNEFYHGGAH*SIPRNL
Trigger: TAAGTTTCTGGGAATTGACCAGTGTGCGCCTCCATG...GTAGAATTCATTTCGGCAGCTCACTAGGATTTTGCTGAACATTAAAAAGTGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358755.5
ENST00000522484.5
ENST00000522566.5
CDS-3UTR CCA 90 bp TTGCCTGATAAGGACATGGGATATGGTACTGACGACAATGATCAGAGACCCAAGTATAATTGGTCTCTCTaGGTATCTGAATCTTCTAAC +
Preference number: 4 (lower is better)
Translates to: LPDKDMGYGTDDNDQRPKYNWSL*VSESSN
Trigger: GTTAGAAGATTCAGATACCCAGAGAGACCAATTATA...CTTGGGTCTCTGATCATTGTCGTCAGTACCATATCCCATGTCCTTATCAGGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521195.1
CDS-3UTR CCA 90 bp ATTCTTACAAAACAGTGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGCACACAAAGGCACAGTaGCAAGAGTACAAAGTAGCG +
Preference number: 4 (lower is better)
Translates to: ILTKQCIGHFQCNTNLLLHTKAQ*QEYKVA
Trigger: CGCTACTTTGTACTCTTGCCACTGTGCCTTTGTGTG...CAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCACTGTTTTGTAAGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR CCA 90 bp TGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGAGTAACGAGAGAAAATGCCTGATAAGGACATaGGATATGGTACTGACGACA +
Preference number: 4 (lower is better)
Translates to: CIGHFQCNTNLLLSNERKCLIRT*DMVLTT
Trigger: TGTCGTCAGTACCATATCCCATGTCCTTATCAGGCA...TTTTCTCTCGTTACTCAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522566.5
ENST00000523739.5
CDS-3UTR CCA 90 bp GCACTAATATCGCTATCACACTTTTTAATGTTCAGCAAAATCCTAGTGAGCTGCTTGGTTCTGAAGAACTaGGGACCTGCAAATTGTTGC +
Preference number: 4 (lower is better)
Translates to: ALISLSHFLMFSKILVSCLVLKN*GPANCC
Trigger: GCAACAATTTGCAGGTCCCCAGTTCTTCAGAACCAA...GCAGCTCACTAGGATTTTGCTGAACATTAAAAAGTGTGATAGCGATATTAGTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358755.5
ENST00000522484.5
ENST00000522566.5
CDS-3UTR CCA 90 bp TGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGAGTAACGAGAGAAAAGGACTGATAAGGACATaGGATATGGTACTGACGACA +
Preference number: 4 (lower is better)
Translates to: CIGHFQCNTNLLLSNERKGLIRT*DMVLTT
Trigger: TGTCGTCAGTACCATATCCCATGTCCTTATCAGTCC...TTTTCTCTCGTTACTCAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522484.5
CDS-3UTR TCA 90 bp CTGATAAGGACATGGGATATGGTACTGACGACAATGATCAGAGACCCAAGTTATTTTTCTTCAAATTCCTaGTTTTACCACATGGCTTGG +
Preference number: 4 (lower is better)
Translates to: LIRTWDMVLTTMIRDPSYFSSNS*FYHMAW
Trigger: CCAAGCCATGTGGTAAAATCAGGAATTTGAAGAAAA...ATAACTTGGGTCTCTGATCATTGTCGTCAGTACCATATCCCATGTCCTTATCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000519011.5
ENST00000521195.1
CDS-3UTR TCA 90 bp AAACAGTGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGAGTAACGAGAGTTTCAATGTTTGGTaGACATTCCAGATTTGCGAG +
Preference number: 4 (lower is better)
Translates to: KQCIGHFQCNTNLLLSNESFNVW*TFQICE
Trigger: CTCGCAAATCTGGAATGTTCACCAAACATTGAAACT...CTCGTTACTCAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCACTGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358755.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR TCA 90 bp GCACTAATATCGCTATCACACTTTTTAATGTTCAGCAAAATCCTAGTGAGCTGCCAAGGTGGAACCACATaGATTTGTTCTATGCAGGTT +
Preference number: 4 (lower is better)
Translates to: ALISLSHFLMFSKILVSCQGGTT*ICSMQV
Trigger: AACCTGCATAGAACAAATTCATGTGGTTCCACCTTG...GCAGCTCACTAGGATTTTGCTGAACATTAAAAAGTGTGATAGCGATATTAGTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358755.5
ENST00000522484.5
ENST00000522566.5
CDS-3UTR TCA 90 bp CACTTTTTAATGTTCAGCAAAATCCTAGTGAGCTGCCGAAATGAATTCTACAAAGTGCAAGCCTTATTTTaGGAGCCTAGGACAACAGTG +
Preference number: 4 (lower is better)
Translates to: HFLMFSKILVSCRNEFYKVQALF*EPRTTV
Trigger: CACTGTTGTCCTAGGCTCTCAAAATAAGGCTTGCAC...TTTGTAGAATTCATTTCGGCAGCTCACTAGGATTTTGCTGAACATTAAAAAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358755.5
ENST00000522484.5
ENST00000522566.5
CDS-3UTR TCA 90 bp AAACAGTGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGAGTAACGAGGGCCATCATGTTGTATaGCTTGTCGAACATGATTTA +
Preference number: 4 (lower is better)
Translates to: KQCIGHFQCNTNLLLSNEGHHVV*LVEHDL
Trigger: TAAATCATGTTCGACAAGTCATACAACATGATGGCC...CTCGTTACTCAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCACTGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR TCA 90 bp TCACACTTTTTAATGTTCAGCAAAATCCTAGTGAGCTGCCGAAATGAATTCTACCAAGATACAAGCCGCTaGAGACTCCAATTCGAATCA +
Preference number: 4 (lower is better)
Translates to: SHFLMFSKILVSCRNEFYQDTSR*RLQFES
Trigger: TGATTCGAATTGGAGTCTTCAGCGGCTTGTATCTTG...GTAGAATTCATTTCGGCAGCTCACTAGGATTTTGCTGAACATTAAAAAGTGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358755.5
ENST00000522484.5
ENST00000522566.5
CDS-3UTR TCA 90 bp ATTCTTACAAAACAGTGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGCAAGATACAAGCCGCTaGAGACTCCAATTCGAATCA +
Preference number: 4 (lower is better)
Translates to: ILTKQCIGHFQCNTNLLLQDTSR*RLQFES
Trigger: TGATTCGAATTGGAGTCTTCAGCGGCTTGTATCTTG...CAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCACTGTTTTGTAAGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR TCA 90 bp TCACACTTTTTAATGTTCAGCAAAATCCTAGTGAGCTGCCGAAATGAATTCTACTGTTCTTCAAGTATCTaGATGACAACCACCTCCCTG +
Preference number: 4 (lower is better)
Translates to: SHFLMFSKILVSCRNEFYCSSSI*MTTTSL
Trigger: CAGGGAGGTGGTTGTCATTCAGATACTTGAAGAACA...GTAGAATTCATTTCGGCAGCTCACTAGGATTTTGCTGAACATTAAAAAGTGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358755.5
ENST00000522484.5
ENST00000522566.5
CDS-3UTR TCA 90 bp ATTCTTACAAAACAGTGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGTGTTCTTCAAGTATCTaGATGACAACCACCTCCCTG +
Preference number: 4 (lower is better)
Translates to: ILTKQCIGHFQCNTNLLLCSSSI*MTTTSL
Trigger: CAGGGAGGTGGTTGTCATTCAGATACTTGAAGAACA...CAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCACTGTTTTGTAAGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR GCA 90 bp ATCATGGCTAGTAATTGCTACTGCAGAAGTGCCATGATTTGCTGTAGCTCCTGTTTGGTACAAATGCTTTaGAGAGGAAAGTTTCAATGT +
Preference number: 4 (lower is better)
Translates to: IMASNCYCRSAMICCSSCLVQML*RGKFQC
Trigger: ACATTGAAACTTTCCTCTGCAAAGCATTTGTACCAA...ACAGGAGCTACAGCAAATCATGGCACTTCTGCAGTAGCAATTACTAGCCATGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000521195.1
ENST00000522484.5
ENST00000523933.5
CDS-3UTR GCA 90 bp TGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGAGTAACGAGAGAAAACCAGAAGTCTTAAGATaGCTTGGACACCAAAATCCA +
Preference number: 4 (lower is better)
Translates to: CIGHFQCNTNLLLSNERKPEVLR*LGHQNP
Trigger: TGGATTTTGGTGTCCAAGGCATCTTAAGACTTCTGG...TTTTCTCTCGTTACTCAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358755.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR GCA 90 bp GCAAAAGAAGAATGTAACAGTGATTCTTACAAAACAGTGCATAGGTCACTTCCACCTTATTGCAGGCTGTaGTATCGCCTAGCAAAAATC +
Preference number: 4 (lower is better)
Translates to: AKEECNSDSYKTVHRSLPPYCRL*YRLAKI
Trigger: GATTTTTGCTAGGCGATAGCACAGCCTGCAATAAGG...TGGAAGTGACCTATGCACTGTTTTGTAAGAATCACTGTTACATTCTTCTTTTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000358755.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR GCA 90 bp TCACACTTTTTAATGTTCAGCAAAATCCTAGTGAGCTGCCGAAATGAATTCTACAACCACACTGCTTTTTaGTCGATGGCTTCACAACTC +
Preference number: 4 (lower is better)
Translates to: SHFLMFSKILVSCRNEFYNHTAF*SMASQL
Trigger: GAGTTGTGAAGCCATCGAGCAAAAAGCAGTGTGGTT...GTAGAATTCATTTCGGCAGCTCACTAGGATTTTGCTGAACATTAAAAAGTGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000358755.5
ENST00000522484.5
ENST00000522566.5
CDS-3UTR GCA 90 bp GCAAAAGAAGAATGTAACAGTGATTCTTACAAAACAGTGCATAGGTCACTTCCAAGCATGAAACCACACTaGTTTTTGCTCGATGGCTTC +
Preference number: 4 (lower is better)
Translates to: AKEECNSDSYKTVHRSLPSMKPH*FLLDGF
Trigger: GAAGCCATCGAGCAAAAAGCAGTGTGGTTTCATGCT...TGGAAGTGACCTATGCACTGTTTTGTAAGAATCACTGTTACATTCTTCTTTTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR GCA 90 bp ATTCTTACAAAACAGTGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGAGCATGAAACCACACTaGTTTTTGCTCGATGGCTTC +
Preference number: 4 (lower is better)
Translates to: ILTKQCIGHFQCNTNLLLSMKPH*FLLDGF
Trigger: GAAGCCATCGAGCAAAAAGCAGTGTGGTTTCATGCT...CAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCACTGTTTTGTAAGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR GCA 90 bp GCACTAATATCGCTATCACACTTTTTAATGTTCAGCAAAATCCTAGTGAGCTGCTTCTGGTCGAGCTTTTaGTTTTGCCTGATAAGGACA +
Preference number: 4 (lower is better)
Translates to: ALISLSHFLMFSKILVSCFWSSF*FCLIRT
Trigger: TGTCCTTATCAGGCAAAAGCAAAAGCTCGACCAGAA...GCAGCTCACTAGGATTTTGCTGAACATTAAAAAGTGTGATAGCGATATTAGTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000358755.5
ENST00000522566.5
CDS-3UTR GCA 90 bp TCACACTTTTTAATGTTCAGCAAAATCCTAGTGAGCTGCCGAAATGAATTCTACACCCAGCCCATTCTGTaGATGTCTTTTTGCTTCCAA +
Preference number: 4 (lower is better)
Translates to: SHFLMFSKILVSCRNEFYTQPIL*MSFCFQ
Trigger: TTGGAAGCAAAAAGACATGCACAGAATGGGCTGGGT...GTAGAATTCATTTCGGCAGCTCACTAGGATTTTGCTGAACATTAAAAAGTGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000358755.5
ENST00000522566.5
CDS-3UTR GCA 90 bp GCAAAAGAAGAATGTAACAGTGATTCTTACAAAACAGTGCATAGGTCACTTCCAACCCAGCCCATTCTGTaGATGTCTTTTTGCTTCCAA +
Preference number: 4 (lower is better)
Translates to: AKEECNSDSYKTVHRSLPTQPIL*MSFCFQ
Trigger: TTGGAAGCAAAAAGACATGCACAGAATGGGCTGGGT...TGGAAGTGACCTATGCACTGTTTTGTAAGAATCACTGTTACATTCTTCTTTTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522566.5
ENST00000523739.5
CDS-3UTR GCA 90 bp TGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGAGTAACGAGAGAAAAATCATGGCTAGTAATTaGTACTGCAGAAGTGCCATG +
Preference number: 4 (lower is better)
Translates to: CIGHFQCNTNLLLSNERKIMASN*YCRSAM
Trigger: CATGGCACTTCTGCAGTAGCAATTACTAGCCATGAT...TTTTCTCTCGTTACTCAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR GCA 90 bp ATTCTTACAAAACAGTGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGCAAATTGTTGCTCTGTaGCAGGCCAGTGTCAGTAAT +
Preference number: 4 (lower is better)
Translates to: ILTKQCIGHFQCNTNLLLQIVAL*QASVSN
Trigger: ATTACTGACACTGGCCTGGCACAGAGCAACAATTTG...CAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCACTGTTTTGTAAGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR CCA 90 bp TGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGAGTAACGAGAGAAAATCTGGGAACAGTAATTaGTTCACAGGTGAAGAGACT +
Preference number: 4 (lower is better)
Translates to: CIGHFQCNTNLLLSNERKSGNSN*FTGEET
Trigger: AGTCTCTTCACCTGTGAACCAATTACTGTTCCCAGA...TTTTCTCTCGTTACTCAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
CDS-3UTR CCA 90 bp AAACAGTGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGAGTAACGAGTTGTTCTATGCAGGTTaGTACAAATGCTTTGCAGAG +
Preference number: 4 (lower is better)
Translates to: KQCIGHFQCNTNLLLSNELFYAG*YKCFAE
Trigger: CTCTGCAAAGCATTTGTACCAACCTGCATAGAACAA...CTCGTTACTCAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCACTGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358755.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR CCA 90 bp AGTTATCTCCCAGGTAATCCTGTTCACTTGCTCATAGACGTAACATCCGAGAAGAAGAAATTCTGTGTGTaGATCAAAAGTTACAGGAAC +
Preference number: 4 (lower is better)
Translates to: SYLPGNPVHLLIDVTSEKKKFCV*IKSYRN
Trigger: GTTCCTGTAACTTTTGATCCACACACAGAATTTCTT...CTTCTCGGATGTTACGTCTATGAGCAAGTGAACAGGATTACCTGGGAGATAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521195.1
CDS-3UTR CCA 90 bp AAACAGTGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGAGTAACGAGAGTCTTAAGATGCCTTaGACACCAAAATCCAATGTC +
Preference number: 4 (lower is better)
Translates to: KQCIGHFQCNTNLLLSNESLKMP*TPKSNV
Trigger: GACATTGGATTTTGGTGTCCAAGGCATCTTAAGACT...CTCGTTACTCAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCACTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358755.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR CCA 90 bp CACTTTTTAATGTTCAGCAAAATCCTAGTGAGCTGCCGAAATGAATTCTACAAACATGGAGGCGCACACTaGTCAATTCCCAGAAACTTA +
Preference number: 4 (lower is better)
Translates to: HFLMFSKILVSCRNEFYKHGGAH*SIPRNL
Trigger: TAAGTTTCTGGGAATTGACCAGTGTGCGCCTCCATG...TTTGTAGAATTCATTTCGGCAGCTCACTAGGATTTTGCTGAACATTAAAAAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358755.5
ENST00000522484.5
ENST00000522566.5
CDS-3UTR CCA 90 bp ATTCTTACAAAACAGTGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGTGCCTGATAAGGACATaGGATATGGTACTGACGACA +
Preference number: 4 (lower is better)
Translates to: ILTKQCIGHFQCNTNLLLCLIRT*DMVLTT
Trigger: TGTCGTCAGTACCATATCCCATGTCCTTATCAGGCA...CAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCACTGTTTTGTAAGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522566.5
ENST00000523739.5
CDS-3UTR CCA 90 bp TGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGAGTAACGAGAGAAAATCGACTTTCACTGATTaGATCTCTCTTGCGATTTCG +
Preference number: 4 (lower is better)
Translates to: CIGHFQCNTNLLLSNERKSTFTD*ISLAIS
Trigger: CGAAATCGCAAGAGAGATCCAATCAGTGAAAGTCGA...TTTTCTCTCGTTACTCAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522566.5
ENST00000523739.5
CDS-3UTR CCA 90 bp ATCATGGCTAGTAATTGCTACTGCAGAAGTGCCATGATTTGCTGTAGCTCCTGTAGTAATATCACTCTTTaGACTAATCCTTCCTTCACT +
Preference number: 4 (lower is better)
Translates to: IMASNCYCRSAMICCSSCSNITL*TNPSFT
Trigger: AGTGAAGGAAGGATTAGTCCAAAGAGTGATATTACT...ACAGGAGCTACAGCAAATCATGGCACTTCTGCAGTAGCAATTACTAGCCATGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
CDS-3UTR CCA 90 bp GCAAAAGAAGAATGTAACAGTGATTCTTACAAAACAGTGCATAGGTCACTTCCATTGGTTCTGAAGAACTaGGGACCTGCAAATTGTTGC +
Preference number: 4 (lower is better)
Translates to: AKEECNSDSYKTVHRSLPLVLKN*GPANCC
Trigger: GCAACAATTTGCAGGTCCCCAGTTCTTCAGAACCAA...TGGAAGTGACCTATGCACTGTTTTGTAAGAATCACTGTTACATTCTTCTTTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR CCA 90 bp ATTCTTACAAAACAGTGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGTTGGTTCTGAAGAACTaGGGACCTGCAAATTGTTGC +
Preference number: 4 (lower is better)
Translates to: ILTKQCIGHFQCNTNLLLLVLKN*GPANCC
Trigger: GCAACAATTTGCAGGTCCCCAGTTCTTCAGAACCAA...CAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCACTGTTTTGTAAGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR TCA 90 bp ATTCTTACAAAACAGTGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGCAAGGTGGAACCACATaGATTTGTTCTATGCAGGTT +
Preference number: 4 (lower is better)
Translates to: ILTKQCIGHFQCNTNLLLQGGTT*ICSMQV
Trigger: AACCTGCATAGAACAAATTCATGTGGTTCCACCTTG...CAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCACTGTTTTGTAAGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358755.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR TCA 90 bp CACTTTTTAATGTTCAGCAAAATCCTAGTGAGCTGCCGAAATGAATTCTACAAACAAGATACAAGCCGCTaGAGACTCCAATTCGAATCA +
Preference number: 4 (lower is better)
Translates to: HFLMFSKILVSCRNEFYKQDTSR*RLQFES
Trigger: TGATTCGAATTGGAGTCTTCAGCGGCTTGTATCTTG...TTTGTAGAATTCATTTCGGCAGCTCACTAGGATTTTGCTGAACATTAAAAAGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358755.5
ENST00000522484.5
ENST00000522566.5
CDS-3UTR GCA 90 bp TCACACTTTTTAATGTTCAGCAAAATCCTAGTGAGCTGCCGAAATGAATTCTACCCAGAAGTCTTAAGATaGCTTGGACACCAAAATCCA +
Preference number: 4 (lower is better)
Translates to: SHFLMFSKILVSCRNEFYPEVLR*LGHQNP
Trigger: TGGATTTTGGTGTCCAAGGCATCTTAAGACTTCTGG...GTAGAATTCATTTCGGCAGCTCACTAGGATTTTGCTGAACATTAAAAAGTGTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358755.5
ENST00000522484.5
ENST00000522566.5
CDS-3UTR GCA 90 bp CACTTTTTAATGTTCAGCAAAATCCTAGTGAGCTGCCGAAATGAATTCTACAAAAGCATGAAACCACACTaGTTTTTGCTCGATGGCTTC +
Preference number: 4 (lower is better)
Translates to: HFLMFSKILVSCRNEFYKSMKPH*FLLDGF
Trigger: GAAGCCATCGAGCAAAAAGCAGTGTGGTTTCATGCT...TTTGTAGAATTCATTTCGGCAGCTCACTAGGATTTTGCTGAACATTAAAAAGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000358755.5
ENST00000522484.5
ENST00000522566.5
CDS-3UTR GCA 90 bp TCACACTTTTTAATGTTCAGCAAAATCCTAGTGAGCTGCCGAAATGAATTCTACTCGAGCTTTTGCTTTTaGCTGATAAGGACATGGGAT +
Preference number: 4 (lower is better)
Translates to: SHFLMFSKILVSCRNEFYSSFCF*LIRTWD
Trigger: ATCCCATGTCCTTATCAGGCAAAAGCAAAAGCTCGA...GTAGAATTCATTTCGGCAGCTCACTAGGATTTTGCTGAACATTAAAAAGTGTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000358755.5
ENST00000522566.5
CDS-3UTR GCA 90 bp TCACACTTTTTAATGTTCAGCAAAATCCTAGTGAGCTGCCGAAATGAATTCTACTTCTGGTCGAGCTTTTaGTTTTGCCTGATAAGGACA +
Preference number: 4 (lower is better)
Translates to: SHFLMFSKILVSCRNEFYFWSSF*FCLIRT
Trigger: TGTCCTTATCAGGCAAAAGCAAAAGCTCGACCAGAA...GTAGAATTCATTTCGGCAGCTCACTAGGATTTTGCTGAACATTAAAAAGTGTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000358755.5
ENST00000522566.5
CDS-3UTR GCA 90 bp ATTCTTACAAAACAGTGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGTTCTGGTCGAGCTTTTaGTTTTGCCTGATAAGGACA +
Preference number: 4 (lower is better)
Translates to: ILTKQCIGHFQCNTNLLLFWSSF*FCLIRT
Trigger: TGTCCTTATCAGGCAAAAGCAAAAGCTCGACCAGAA...CAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCACTGTTTTGTAAGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522566.5
ENST00000523739.5
CDS-3UTR GCA 90 bp GCAAAAGAAGAATGTAACAGTGATTCTTACAAAACAGTGCATAGGTCACTTCCAGCTAGTAATTGCTACTaGAGAAGTGCCATGATTTGC +
Preference number: 4 (lower is better)
Translates to: AKEECNSDSYKTVHRSLPASNCY*RSAMIC
Trigger: GCAAATCATGGCACTTCTGCAGTAGCAATTACTAGC...TGGAAGTGACCTATGCACTGTTTTGTAAGAATCACTGTTACATTCTTCTTTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR GCA 90 bp TCACACTTTTTAATGTTCAGCAAAATCCTAGTGAGCTGCCGAAATGAATTCTACATCATGGCTAGTAATTaGTACTGCAGAAGTGCCATG +
Preference number: 4 (lower is better)
Translates to: SHFLMFSKILVSCRNEFYIMASN*YCRSAM
Trigger: CATGGCACTTCTGCAGTAGCAATTACTAGCCATGAT...GTAGAATTCATTTCGGCAGCTCACTAGGATTTTGCTGAACATTAAAAAGTGTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358755.5
ENST00000522484.5
ENST00000522566.5
CDS-3UTR GCA 90 bp CACTTTTTAATGTTCAGCAAAATCCTAGTGAGCTGCCGAAATGAATTCTACAAACAAATTGTTGCTCTGTaGCAGGCCAGTGTCAGTAAT +
Preference number: 4 (lower is better)
Translates to: HFLMFSKILVSCRNEFYKQIVAL*QASVSN
Trigger: ATTACTGACACTGGCCTGGCACAGAGCAACAATTTG...TTTGTAGAATTCATTTCGGCAGCTCACTAGGATTTTGCTGAACATTAAAAAGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358755.5
ENST00000522484.5
ENST00000522566.5
CDS-3UTR GCA 90 bp AAACAGTGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGAGTAACGAGATTCTTACAAAACAGTaGATAGGTCACTTCCAGTGT +
Preference number: 4 (lower is better)
Translates to: KQCIGHFQCNTNLLLSNEILTKQ*IGHFQC
Trigger: ACACTGGAAGTGACCTATGCACTGTTTTGTAAGAAT...CTCGTTACTCAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCACTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR CCA 90 bp TGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGAGTAACGAGAGAAAATTGTTCTATGCAGGTTaGTACAAATGCTTTGCAGAG +
Preference number: 4 (lower is better)
Translates to: CIGHFQCNTNLLLSNERKLFYAG*YKCFAE
Trigger: CTCTGCAAAGCATTTGTACCAACCTGCATAGAACAA...TTTTCTCTCGTTACTCAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358755.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR CCA 90 bp AAACAGTGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGAGTAACGAGAAGTTTACGACAAGGTaGAACCACATGAATTTGTTC +
Preference number: 4 (lower is better)
Translates to: KQCIGHFQCNTNLLLSNEKFTTR*NHMNLF
Trigger: GAACAAATTCATGTGGTTCCACCTTGTCGTAAACTT...CTCGTTACTCAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCACTGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358755.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR CCA 90 bp TGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGAGTAACGAGAGAAAAAGTCTTAAGATGCCTTaGACACCAAAATCCAATGTC +
Preference number: 4 (lower is better)
Translates to: CIGHFQCNTNLLLSNERKSLKMP*TPKSNV
Trigger: GACATTGGATTTTGGTGTCCAAGGCATCTTAAGACT...TTTTCTCTCGTTACTCAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358755.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR CCA 90 bp GCAAAAGAAGAATGTAACAGTGATTCTTACAAAACAGTGCATAGGTCACTTCCACTGCTTTTTGCTCGATaGCTTCACAACTCCATTTTC +
Preference number: 4 (lower is better)
Translates to: AKEECNSDSYKTVHRSLPLLFAR*LHNSIF
Trigger: GAAAATGGAGTTGTGAAGCCATCGAGCAAAAAGCAG...TGGAAGTGACCTATGCACTGTTTTGTAAGAATCACTGTTACATTCTTCTTTTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000358755.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR CCA 90 bp TCACACTTTTTAATGTTCAGCAAAATCCTAGTGAGCTGCCGAAATGAATTCTACCTGCTTTTTGCTCGATaGCTTCACAACTCCATTTTC +
Preference number: 4 (lower is better)
Translates to: SHFLMFSKILVSCRNEFYLLFAR*LHNSIF
Trigger: GAAAATGGAGTTGTGAAGCCATCGAGCAAAAAGCAG...GTAGAATTCATTTCGGCAGCTCACTAGGATTTTGCTGAACATTAAAAAGTGTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000358755.5
ENST00000522484.5
ENST00000522566.5
CDS-3UTR CCA 90 bp TGTAGTACTCTTCGACTTTCACTGATTGGATCTCTCTTGCGATTTCGTTTAAAATCGACTTTCACTGATTaGATCTCTCTTGCGATTTCG +
Preference number: 4 (lower is better)
Translates to: CSTLRLSLIGSLLRFRLKSTFTD*ISLAIS
Trigger: CGAAATCGCAAGAGAGATCCAATCAGTGAAAGTCGA...TTTTAAACGAAATCGCAAGAGAGATCCAATCAGTGAAAGTCGAAGAGTACTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000523933.5
CDS-3UTR CCA 90 bp GCAAAAGAAGAATGTAACAGTGATTCTTACAAAACAGTGCATAGGTCACTTCCATCGACTTTCACTGATTaGATCTCTCTTGCGATTTCG +
Preference number: 4 (lower is better)
Translates to: AKEECNSDSYKTVHRSLPSTFTD*ISLAIS
Trigger: CGAAATCGCAAGAGAGATCCAATCAGTGAAAGTCGA...TGGAAGTGACCTATGCACTGTTTTGTAAGAATCACTGTTACATTCTTCTTTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522566.5
ENST00000523739.5
CDS-3UTR CCA 90 bp AAACAGTGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGAGTAACGAGATACATCACATGGCTTaGATGAATCACTCTTTGCAT +
Preference number: 4 (lower is better)
Translates to: KQCIGHFQCNTNLLLSNEIHHMA*MNHSLH
Trigger: ATGCAAAGAGTGATTCATCCAAGCCATGTGATGTAT...CTCGTTACTCAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCACTGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523739.5
CDS-3UTR CCA 90 bp GCAAAAGAAGAATGTAACAGTGATTCTTACAAAACAGTGCATAGGTCACTTCCATCGACTTTCACTGATTaGACTGATAAGGACATGGGA +
Preference number: 4 (lower is better)
Translates to: AKEECNSDSYKTVHRSLPSTFTD*TDKDMG
Trigger: TCCCATGTCCTTATCAGTCCAATCAGTGAAAGTCGA...TGGAAGTGACCTATGCACTGTTTTGTAAGAATCACTGTTACATTCTTCTTTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522484.5
3UTR CAA 72 bp ACAAAGCAAACTCCACTAATGTTGTCTCCTTCAACTTaGTTCATAGCAAGAAGCATAACAGTCAGGAAACCT +
Preference number: 4 (lower is better)
Translates to: TKQTPLMLSPST*FIARSITVRKP
Trigger: AGGTTTCCTGACTGTTATGCTTCTTGCTATGAACAAAGTTGAAGGAGACAACATTAGTGGAGTTTGCTTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000523933.5
CDS-3UTR TCA 90 bp GCACTAATATCGCTATCACACTTTTTAATGTTCAGCAAAATCCTAGTGAGCTGCTTTTCTTCAAATTCCTaGTTTTACCACATGGCTTGG +
Preference number: 4 (lower is better)
Translates to: ALISLSHFLMFSKILVSCFSSNS*FYHMAW
Trigger: CCAAGCCATGTGGTAAAATCAGGAATTTGAAGAAAA...GCAGCTCACTAGGATTTTGCTGAACATTAAAAAGTGTGATAGCGATATTAGTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000358755.5
ENST00000522484.5
ENST00000522566.5
CDS-3UTR TCA 90 bp ATTCTTACAAAACAGTGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGAGTTTCAATGTTTGGTaGACATTCCAGATTTGCGAG +
Preference number: 4 (lower is better)
Translates to: ILTKQCIGHFQCNTNLLLSFNVW*TFQICE
Trigger: CTCGCAAATCTGGAATGTTCACCAAACATTGAAACT...CAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCACTGTTTTGTAAGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358755.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR TCA 90 bp CACTTTTTAATGTTCAGCAAAATCCTAGTGAGCTGCCGAAATGAATTCTACAAACAAGGTGGAACCACATaGATTTGTTCTATGCAGGTT +
Preference number: 4 (lower is better)
Translates to: HFLMFSKILVSCRNEFYKQGGTT*ICSMQV
Trigger: AACCTGCATAGAACAAATTCATGTGGTTCCACCTTG...TTTGTAGAATTCATTTCGGCAGCTCACTAGGATTTTGCTGAACATTAAAAAGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358755.5
ENST00000522484.5
ENST00000522566.5
CDS-3UTR TCA 90 bp GCAAAAGAAGAATGTAACAGTGATTCTTACAAAACAGTGCATAGGTCACTTCCAGGCCATCATGTTGTATaGCTTGTCGAACATGATTTA +
Preference number: 4 (lower is better)
Translates to: AKEECNSDSYKTVHRSLPGHHVV*LVEHDL
Trigger: TAAATCATGTTCGACAAGTCATACAACATGATGGCC...TGGAAGTGACCTATGCACTGTTTTGTAAGAATCACTGTTACATTCTTCTTTTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR TCA 90 bp GCAAAAGAAGAATGTAACAGTGATTCTTACAAAACAGTGCATAGGTCACTTCCAATAGTGGACACTCTTTaGGTAAGCACCTTATTTCAG +
Preference number: 4 (lower is better)
Translates to: AKEECNSDSYKTVHRSLPIVDTL*VSTLFQ
Trigger: CTGAAATAAGGTGCTTACTCAAAGAGTGTCCACTAT...TGGAAGTGACCTATGCACTGTTTTGTAAGAATCACTGTTACATTCTTCTTTTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358755.5
ENST00000522484.5
ENST00000522566.5
CDS-3UTR GCA 90 bp CACTTTTTAATGTTCAGCAAAATCCTAGTGAGCTGCCGAAATGAATTCTACAAACCAGAAGTCTTAAGATaGCTTGGACACCAAAATCCA +
Preference number: 4 (lower is better)
Translates to: HFLMFSKILVSCRNEFYKPEVLR*LGHQNP
Trigger: TGGATTTTGGTGTCCAAGGCATCTTAAGACTTCTGG...TTTGTAGAATTCATTTCGGCAGCTCACTAGGATTTTGCTGAACATTAAAAAGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358755.5
ENST00000522484.5
ENST00000522566.5
CDS-3UTR GCA 90 bp CACTTTTTAATGTTCAGCAAAATCCTAGTGAGCTGCCGAAATGAATTCTACAAATCGAGCTTTTGCTTTTaGCTGATAAGGACATGGGAT +
Preference number: 4 (lower is better)
Translates to: HFLMFSKILVSCRNEFYKSSFCF*LIRTWD
Trigger: ATCCCATGTCCTTATCAGGCAAAAGCAAAAGCTCGA...TTTGTAGAATTCATTTCGGCAGCTCACTAGGATTTTGCTGAACATTAAAAAGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000358755.5
ENST00000522566.5
CDS-3UTR GCA 90 bp CACTTTTTAATGTTCAGCAAAATCCTAGTGAGCTGCCGAAATGAATTCTACAAAATCATGGCTAGTAATTaGTACTGCAGAAGTGCCATG +
Preference number: 4 (lower is better)
Translates to: HFLMFSKILVSCRNEFYKIMASN*YCRSAM
Trigger: CATGGCACTTCTGCAGTAGCAATTACTAGCCATGAT...TTTGTAGAATTCATTTCGGCAGCTCACTAGGATTTTGCTGAACATTAAAAAGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358755.5
ENST00000522484.5
ENST00000522566.5
CDS-3UTR CCA 90 bp TCACACTTTTTAATGTTCAGCAAAATCCTAGTGAGCTGCCGAAATGAATTCTACTTGTTCTATGCAGGTTaGTACAAATGCTTTGCAGAG +
Preference number: 4 (lower is better)
Translates to: SHFLMFSKILVSCRNEFYLFYAG*YKCFAE
Trigger: CTCTGCAAAGCATTTGTACCAACCTGCATAGAACAA...GTAGAATTCATTTCGGCAGCTCACTAGGATTTTGCTGAACATTAAAAAGTGTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358755.5
ENST00000522484.5
ENST00000522566.5
CDS-3UTR CCA 90 bp ATTCTTACAAAACAGTGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGTTGTTCTATGCAGGTTaGTACAAATGCTTTGCAGAG +
Preference number: 4 (lower is better)
Translates to: ILTKQCIGHFQCNTNLLLLFYAG*YKCFAE
Trigger: CTCTGCAAAGCATTTGTACCAACCTGCATAGAACAA...CAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCACTGTTTTGTAAGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358755.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR CCA 90 bp TGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGAGTAACGAGAGAAAAAAGTTTACGACAAGGTaGAACCACATGAATTTGTTC +
Preference number: 4 (lower is better)
Translates to: CIGHFQCNTNLLLSNERKKFTTR*NHMNLF
Trigger: GAACAAATTCATGTGGTTCCACCTTGTCGTAAACTT...TTTTCTCTCGTTACTCAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCA
38% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000358755.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR CCA 90 bp AAACAGTGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGAGTAACGAGAAGAAATTCTGTGTGTaGATCAAAAGTTACAGGAAC +
Preference number: 4 (lower is better)
Translates to: KQCIGHFQCNTNLLLSNEKKFCV*IKSYRN
Trigger: GTTCCTGTAACTTTTGATCCACACACAGAATTTCTT...CTCGTTACTCAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCACTGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358755.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR CCA 90 bp TCACACTTTTTAATGTTCAGCAAAATCCTAGTGAGCTGCCGAAATGAATTCTACAGTCTTAAGATGCCTTaGACACCAAAATCCAATGTC +
Preference number: 4 (lower is better)
Translates to: SHFLMFSKILVSCRNEFYSLKMP*TPKSNV
Trigger: GACATTGGATTTTGGTGTCCAAGGCATCTTAAGACT...GTAGAATTCATTTCGGCAGCTCACTAGGATTTTGCTGAACATTAAAAAGTGTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358755.5
ENST00000522484.5
ENST00000522566.5
CDS-3UTR CCA 90 bp CACTTTTTAATGTTCAGCAAAATCCTAGTGAGCTGCCGAAATGAATTCTACAAACTGCTTTTTGCTCGATaGCTTCACAACTCCATTTTC +
Preference number: 4 (lower is better)
Translates to: HFLMFSKILVSCRNEFYKLLFAR*LHNSIF
Trigger: GAAAATGGAGTTGTGAAGCCATCGAGCAAAAAGCAG...TTTGTAGAATTCATTTCGGCAGCTCACTAGGATTTTGCTGAACATTAAAAAGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000358755.5
ENST00000522484.5
ENST00000522566.5
CDS-3UTR CCA 90 bp GCACTAATATCGCTATCACACTTTTTAATGTTCAGCAAAATCCTAGTGAGCTGCTTCTTTAGTTTTTCTTaGTTCCGGCCATCATGTTGT +
Preference number: 4 (lower is better)
Translates to: ALISLSHFLMFSKILVSCFFSFS*FRPSCC
Trigger: ACAACATGATGGCCGGAACCAAGAAAAACTAAAGAA...GCAGCTCACTAGGATTTTGCTGAACATTAAAAAGTGTGATAGCGATATTAGTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000358755.5
ENST00000522484.5
ENST00000522566.5
CDS-3UTR TCA 90 bp ATTCTTACAAAACAGTGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGTTTTCTTCAAATTCCTaGTTTTACCACATGGCTTGG +
Preference number: 4 (lower is better)
Translates to: ILTKQCIGHFQCNTNLLLFSSNS*FYHMAW
Trigger: CCAAGCCATGTGGTAAAATCAGGAATTTGAAGAAAA...CAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCACTGTTTTGTAAGAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
CDS-3UTR TCA 90 bp CACTTTTTAATGTTCAGCAAAATCCTAGTGAGCTGCCGAAATGAATTCTACAAAGGCCATCATGTTGTATaGCTTGTCGAACATGATTTA +
Preference number: 4 (lower is better)
Translates to: HFLMFSKILVSCRNEFYKGHHVV*LVEHDL
Trigger: TAAATCATGTTCGACAAGTCATACAACATGATGGCC...TTTGTAGAATTCATTTCGGCAGCTCACTAGGATTTTGCTGAACATTAAAAAGTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358755.5
ENST00000522484.5
ENST00000522566.5
CDS-3UTR GCA 90 bp TCACACTTTTTAATGTTCAGCAAAATCCTAGTGAGCTGCCGAAATGAATTCTACATTCTTACAAAACAGTaGATAGGTCACTTCCAGTGT +
Preference number: 4 (lower is better)
Translates to: SHFLMFSKILVSCRNEFYILTKQ*IGHFQC
Trigger: ACACTGGAAGTGACCTATGCACTGTTTTGTAAGAAT...GTAGAATTCATTTCGGCAGCTCACTAGGATTTTGCTGAACATTAAAAAGTGTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358755.5
ENST00000522484.5
ENST00000522566.5
CDS-3UTR GCA 90 bp ATTCTTACAAAACAGTGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGATTCTTACAAAACAGTaGATAGGTCACTTCCAGTGT +
Preference number: 4 (lower is better)
Translates to: ILTKQCIGHFQCNTNLLLILTKQ*IGHFQC
Trigger: ACACTGGAAGTGACCTATGCACTGTTTTGTAAGAAT...CAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCACTGTTTTGTAAGAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR GCA 90 bp TGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGAGTAACGAGAGAAAAAAAAGGGAAGTCAATTaGACTTGGCCTAATATACAA +
Preference number: 4 (lower is better)
Translates to: CIGHFQCNTNLLLSNERKKREVN*TWPNIQ
Trigger: TTGTATATTAGGCCAAGTGCAATTGACTTCCCTTTT...TTTTCTCTCGTTACTCAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCA
37% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358755.5
ENST00000522484.5
ENST00000522566.5
CDS-3UTR CCA 90 bp GCAAAAGAAGAATGTAACAGTGATTCTTACAAAACAGTGCATAGGTCACTTCCATTTTACCACATGGCTTaGATGAATCACTCTTTGCAT +
Preference number: 4 (lower is better)
Translates to: AKEECNSDSYKTVHRSLPFYHMA*MNHSLH
Trigger: ATGCAAAGAGTGATTCATCCAAGCCATGTGGTAAAA...TGGAAGTGACCTATGCACTGTTTTGTAAGAATCACTGTTACATTCTTCTTTTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
CDS-3UTR CCA 90 bp TCACACTTTTTAATGTTCAGCAAAATCCTAGTGAGCTGCCGAAATGAATTCTACTTTTACCACATGGCTTaGATGAATCACTCTTTGCAT +
Preference number: 4 (lower is better)
Translates to: SHFLMFSKILVSCRNEFYFYHMA*MNHSLH
Trigger: ATGCAAAGAGTGATTCATCCAAGCCATGTGGTAAAA...GTAGAATTCATTTCGGCAGCTCACTAGGATTTTGCTGAACATTAAAAAGTGTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358755.5
ENST00000522484.5
ENST00000522566.5
CDS-3UTR CCA 90 bp GCACTAATATCGCTATCACACTTTTTAATGTTCAGCAAAATCCTAGTGAGCTGCTATAATTGGTCTCTCTaGGTATCTGAATCTTCTAAC +
Preference number: 4 (lower is better)
Translates to: ALISLSHFLMFSKILVSCYNWSL*VSESSN
Trigger: GTTAGAAGATTCAGATACCCAGAGAGACCAATTATA...GCAGCTCACTAGGATTTTGCTGAACATTAAAAAGTGTGATAGCGATATTAGTGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358755.5
ENST00000522484.5
ENST00000522566.5
CDS-3UTR CCA 90 bp TGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGAGTAACGAGAGAAAATATAATTGGTCTCTCTaGGTATCTGAATCTTCTAAC +
Preference number: 4 (lower is better)
Translates to: CIGHFQCNTNLLLSNERKYNWSL*VSESSN
Trigger: GTTAGAAGATTCAGATACCCAGAGAGACCAATTATA...TTTTCTCTCGTTACTCAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358755.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR CCA 90 bp GCAAAAGAAGAATGTAACAGTGATTCTTACAAAACAGTGCATAGGTCACTTCCATTCTTTAGTTTTTCTTaGTTCCGGCCATCATGTTGT +
Preference number: 4 (lower is better)
Translates to: AKEECNSDSYKTVHRSLPFFSFS*FRPSCC
Trigger: ACAACATGATGGCCGGAACCAAGAAAAACTAAAGAA...TGGAAGTGACCTATGCACTGTTTTGTAAGAATCACTGTTACATTCTTCTTTTGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR CCA 90 bp ATTCTTACAAAACAGTGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGTTCTTTAGTTTTTCTTaGTTCCGGCCATCATGTTGT +
Preference number: 4 (lower is better)
Translates to: ILTKQCIGHFQCNTNLLLFFSFS*FRPSCC
Trigger: ACAACATGATGGCCGGAACCAAGAAAAACTAAAGAA...CAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCACTGTTTTGTAAGAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR CCA 90 bp ATTCTTACAAAACAGTGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGGTTTCTGGTGAGGTTTaGATTTCTGTCAAAGTTTCT +
Preference number: 4 (lower is better)
Translates to: ILTKQCIGHFQCNTNLLLVSGEV*ISVKVS
Trigger: AGAAACTTTGACAGAAATCCAAACCTCACCAGAAAC...CAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCACTGTTTTGTAAGAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR CCA 90 bp TCACACTTTTTAATGTTCAGCAAAATCCTAGTGAGCTGCCGAAATGAATTCTACGTTTCTGGTGAGGTTTaGATTTCTGTCAAAGTTTCT +
Preference number: 4 (lower is better)
Translates to: SHFLMFSKILVSCRNEFYVSGEV*ISVKVS
Trigger: AGAAACTTTGACAGAAATCCAAACCTCACCAGAAAC...GTAGAATTCATTTCGGCAGCTCACTAGGATTTTGCTGAACATTAAAAAGTGTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358755.5
ENST00000522484.5
ENST00000522566.5
CDS-3UTR CCA 90 bp GCACTAATATCGCTATCACACTTTTTAATGTTCAGCAAAATCCTAGTGAGCTGCAGTAATATCACTCTTTaGACTAATCCTTCCTTCACT +
Preference number: 4 (lower is better)
Translates to: ALISLSHFLMFSKILVSCSNITL*TNPSFT
Trigger: AGTGAAGGAAGGATTAGTCCAAAGAGTGATATTACT...GCAGCTCACTAGGATTTTGCTGAACATTAAAAAGTGTGATAGCGATATTAGTGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358755.5
ENST00000522484.5
ENST00000522566.5
CDS-3UTR GCA 90 bp ATTCTTACAAAACAGTGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGTTGGTACAAATGCTTTaGAGAGGAAAGTTTCAATGT +
Preference number: 4 (lower is better)
Translates to: ILTKQCIGHFQCNTNLLLLVQML*RGKFQC
Trigger: ACATTGAAACTTTCCTCTGCAAAGCATTTGTACCAA...CAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCACTGTTTTGTAAGAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358755.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR GCA 90 bp TCACACTTTTTAATGTTCAGCAAAATCCTAGTGAGCTGCCGAAATGAATTCTACTTGGTACAAATGCTTTaGAGAGGAAAGTTTCAATGT +
Preference number: 4 (lower is better)
Translates to: SHFLMFSKILVSCRNEFYLVQML*RGKFQC
Trigger: ACATTGAAACTTTCCTCTGCAAAGCATTTGTACCAA...GTAGAATTCATTTCGGCAGCTCACTAGGATTTTGCTGAACATTAAAAAGTGTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358755.5
ENST00000522484.5
ENST00000522566.5
CDS-3UTR GCA 90 bp GCAAAAGAAGAATGTAACAGTGATTCTTACAAAACAGTGCATAGGTCACTTCCAAAAAGGGAAGTCAATTaGACTTGGCCTAATATACAA +
Preference number: 4 (lower is better)
Translates to: AKEECNSDSYKTVHRSLPKREVN*TWPNIQ
Trigger: TTGTATATTAGGCCAAGTGCAATTGACTTCCCTTTT...TGGAAGTGACCTATGCACTGTTTTGTAAGAATCACTGTTACATTCTTCTTTTGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358755.5
ENST00000522484.5
ENST00000522566.5
CDS-3UTR CCA 90 bp GCAAAAGAAGAATGTAACAGTGATTCTTACAAAACAGTGCATAGGTCACTTCCAAAGAAATTCTGTGTGTaGATCAAAAGTTACAGGAAC +
Preference number: 4 (lower is better)
Translates to: AKEECNSDSYKTVHRSLPKKFCV*IKSYRN
Trigger: GTTCCTGTAACTTTTGATCCACACACAGAATTTCTT...TGGAAGTGACCTATGCACTGTTTTGTAAGAATCACTGTTACATTCTTCTTTTGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000358755.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR CCA 90 bp TCACACTTTTTAATGTTCAGCAAAATCCTAGTGAGCTGCCGAAATGAATTCTACTATAATTGGTCTCTCTaGGTATCTGAATCTTCTAAC +
Preference number: 4 (lower is better)
Translates to: SHFLMFSKILVSCRNEFYYNWSL*VSESSN
Trigger: GTTAGAAGATTCAGATACCCAGAGAGACCAATTATA...GTAGAATTCATTTCGGCAGCTCACTAGGATTTTGCTGAACATTAAAAAGTGTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358755.5
ENST00000522484.5
ENST00000522566.5
CDS-3UTR CCA 90 bp TCACACTTTTTAATGTTCAGCAAAATCCTAGTGAGCTGCCGAAATGAATTCTACAGTAATATCACTCTTTaGACTAATCCTTCCTTCACT +
Preference number: 4 (lower is better)
Translates to: SHFLMFSKILVSCRNEFYSNITL*TNPSFT
Trigger: AGTGAAGGAAGGATTAGTCCAAAGAGTGATATTACT...GTAGAATTCATTTCGGCAGCTCACTAGGATTTTGCTGAACATTAAAAAGTGTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358755.5
ENST00000522484.5
ENST00000522566.5
CDS-3UTR CCA 90 bp TCACACTTTTTAATGTTCAGCAAAATCCTAGTGAGCTGCCGAAATGAATTCTACGAAGTCAATTGCACTTaGCCTAATATACAAAAGACT +
Preference number: 4 (lower is better)
Translates to: SHFLMFSKILVSCRNEFYEVNCT*PNIQKT
Trigger: AGTCTTTTGTATATTAGGCCAAGTGCAATTGACTTC...GTAGAATTCATTTCGGCAGCTCACTAGGATTTTGCTGAACATTAAAAAGTGTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358755.5
ENST00000522484.5
ENST00000522566.5
CDS-3UTR GCA 90 bp CACTTTTTAATGTTCAGCAAAATCCTAGTGAGCTGCCGAAATGAATTCTACAAAAAAATCCTAGTGAGCTaGCGAAATGAATTCTACAAA +
Preference number: 4 (lower is better)
Translates to: HFLMFSKILVSCRNEFYKKILVS*RNEFYK
Trigger: TTTGTAGAATTCATTTCGGCAGCTCACTAGGATTTT...TTTGTAGAATTCATTTCGGCAGCTCACTAGGATTTTGCTGAACATTAAAAAGTG
34% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000358755.5
ENST00000522484.5
ENST00000522566.5
CDS-3UTR CCA 90 bp CACTTTTTAATGTTCAGCAAAATCCTAGTGAGCTGCCGAAATGAATTCTACAAAAAGAAATTCTGTGTGTaGATCAAAAGTTACAGGAAC +
Preference number: 4 (lower is better)
Translates to: HFLMFSKILVSCRNEFYKKKFCV*IKSYRN
Trigger: GTTCCTGTAACTTTTGATCCACACACAGAATTTCTT...TTTGTAGAATTCATTTCGGCAGCTCACTAGGATTTTGCTGAACATTAAAAAGTG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000358755.5
ENST00000522484.5
ENST00000522566.5
CDS-3UTR CCA 90 bp CACTTTTTAATGTTCAGCAAAATCCTAGTGAGCTGCCGAAATGAATTCTACAAATATAATTGGTCTCTCTaGGTATCTGAATCTTCTAAC +
Preference number: 4 (lower is better)
Translates to: HFLMFSKILVSCRNEFYKYNWSL*VSESSN
Trigger: GTTAGAAGATTCAGATACCCAGAGAGACCAATTATA...TTTGTAGAATTCATTTCGGCAGCTCACTAGGATTTTGCTGAACATTAAAAAGTG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358755.5
ENST00000522484.5
ENST00000522566.5
CDS-3UTR CAA 90 bp GAGGCAGGTTCACCACAGTCCTGTTCTCTTAACCTGGGGGTGCTAGCTCCGTCCGAGACGGCTCCGGGGTaGCGTCCGGGACTGGAGCTG +
Preference number: 5 (lower is better)
Translates to: EAGSPQSCSLNLGVLAPSETAPG*RPGLEL
Trigger: CAGCTCCAGTCCCGGACGCAACCCCGGAGCCGTCTC...GGACGGAGCTAGCACCCCCAGGTTAAGAGAACAGGACTGTGGTGAACCTGCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000519011.5
ENST00000522484.5
CDS-3UTR CAA 90 bp CCTGGCCCTTCCCGTCGACCTGTTCCCCAGAGAGTCTGGAGATGGATGCTGCTGCTGGGGACCTGCAAATaGTTGCTCTGTGCCAGGCCA +
Preference number: 5 (lower is better)
Translates to: PGPSRRPVPQRVWRWMLLLGTCK*LLCARP
Trigger: TGGCCTGGCACAGAGCAACAATTTGCAGGTCCCCAG...CAGCAGCATCCATCTCCAGACTCTCTGGGGAACAGGTCGACGGGAAGGGCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
CDS-3UTR CAA 90 bp ATGCTGCTGGCGAGGCAGGTTCACCACAGTCCTGTTCTCTTAACCTGGGGGTGCCTGGGGACCTGCAAATaGTTGCTCTGTGCCAGGCCA +
Preference number: 5 (lower is better)
Translates to: MLLARQVHHSPVLLTWGCLGTCK*LLCARP
Trigger: TGGCCTGGCACAGAGCAACAATTTGCAGGTCCCCAG...GCACCCCCAGGTTAAGAGAACAGGACTGTGGTGAACCTGCCTCGCCAGCAGCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
CDS-3UTR CAA 90 bp CCGTCGACCTGTTCCCCAGAGAGTCTGGAGATGGATGCTGCTGGCGAGGCAGGTTGGATGAATCACTCTTaGCATCCTCAGAAGATCCCC +
Preference number: 5 (lower is better)
Translates to: PSTCSPESLEMDAAGEAGWMNHS*HPQKIP
Trigger: GGGGATCTTCTGAGGATGCAAAGAGTGATTCATCCA...ACCTGCCTCGCCAGCAGCATCCATCTCCAGACTCTCTGGGGAACAGGTCGACGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
CDS-3UTR CAA 90 bp CCTGGCCCTTCCCGTCGACCTGTTCCCCAGAGAGTCTGGAGATGGATGCTGCTGGTTCCGGCCATCATGTaGTATGACTTGTCGAACATG +
Preference number: 5 (lower is better)
Translates to: PGPSRRPVPQRVWRWMLLVPAIM*YDLSNM
Trigger: CATGTTCGACAAGTCATACAACATGATGGCCGGAAC...CAGCAGCATCCATCTCCAGACTCTCTGGGGAACAGGTCGACGGGAAGGGCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
CDS-3UTR CAA 90 bp AGTCTGGAGATGGATGCTGCTGGCGAGGCAGGTTCACCACAGTCCTGTTCTCTTCTGGGGACCTGCAAATaGTTGCTCTGTGCCAGGCCA +
Preference number: 5 (lower is better)
Translates to: SLEMDAAGEAGSPQSCSLLGTCK*LLCARP
Trigger: TGGCCTGGCACAGAGCAACAATTTGCAGGTCCCCAG...AAGAGAACAGGACTGTGGTGAACCTGCCTCGCCAGCAGCATCCATCTCCAGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
CDS-3UTR CAA 90 bp TGGTCGAGCTTTTGCTTTTGCCTGATAAGGACATGGGATATGGTACTGACGACAGAGACGGCTCCGGGGTaGCGTCCGGGACTGGAGCTG +
Preference number: 5 (lower is better)
Translates to: WSSFCFCLIRTWDMVLTTETAPG*RPGLEL
Trigger: CAGCTCCAGTCCCGGACGCAACCCCGGAGCCGTCTC...TGTCGTCAGTACCATATCCCATGTCCTTATCAGGCAAAAGCAAAAGCTCGACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000519011.5
ENST00000523933.5
CDS-3UTR CAA 90 bp CCTGGCCCTTCCCGTCGACCTGTTCCCCAGAGAGTCTGGAGATGGATGCTGCTGGGTAATCCTGTTCACTaGCTCATAGACGTAACATCC +
Preference number: 5 (lower is better)
Translates to: PGPSRRPVPQRVWRWMLLGNPVH*LIDVTS
Trigger: GGATGTTACGTCTATGAGCAAGTGAACAGGATTACC...CAGCAGCATCCATCTCCAGACTCTCTGGGGAACAGGTCGACGGGAAGGGCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
CDS-3UTR CAA 90 bp CCGTCGACCTGTTCCCCAGAGAGTCTGGAGATGGATGCTGCTGGCGAGGCAGGTTGGAACCACATGAATTaGTTCTATGCAGGTTGGTAC +
Preference number: 5 (lower is better)
Translates to: PSTCSPESLEMDAAGEAGWNHMN*FYAGWY
Trigger: GTACCAACCTGCATAGAACAAATTCATGTGGTTCCA...ACCTGCCTCGCCAGCAGCATCCATCTCCAGACTCTCTGGGGAACAGGTCGACGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521195.1
ENST00000522484.5
CDS-3UTR CAA 90 bp TTGGTTCTGAAGAACTGGGGACCTGCAAATTGTTGCTCTGTGCCAGGCCAGTGTGGGACCTGCAAATTGTaGCTCTGTGCCAGGCCAGTG +
Preference number: 5 (lower is better)
Translates to: LVLKNWGPANCCSVPGQCGTCKL*LCARPV
Trigger: CACTGGCCTGGCACAGAGCAACAATTTGCAGGTCCC...ACACTGGCCTGGCACAGAGCAACAATTTGCAGGTCCCCAGTTCTTCAGAACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
CDS-3UTR CAA 90 bp AGAGTCTGGAGATGGATGCTGCTGGCGAGGCAGGTTCACCACAGTCCTGTTCTCCTGGTTCCCATGGATTaGGAAATGACCTTCAGCTTG +
Preference number: 5 (lower is better)
Translates to: RVWRWMLLARQVHHSPVLLVPMD*EMTFSL
Trigger: CAAGCTGAAGGTCATTTCCAAATCCATGGGAACCAG...GAGAACAGGACTGTGGTGAACCTGCCTCGCCAGCAGCATCCATCTCCAGACTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
CDS-3UTR CAA 90 bp AGAGTCTGGAGATGGATGCTGCTGGCGAGGCAGGTTCACCACAGTCCTGTTCTCAGAGATGTGGAACCTTaGAGGCTGCTTGGTTCTGAA +
Preference number: 5 (lower is better)
Translates to: RVWRWMLLARQVHHSPVLRDVEP*RLLGSE
Trigger: TTCAGAACCAAGCAGCCTCAAAGGTTCCACATCTCT...GAGAACAGGACTGTGGTGAACCTGCCTCGCCAGCAGCATCCATCTCCAGACTCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
CDS-3UTR CAA 90 bp AAACAGTGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGAGTAACGAGGAGACGGCTCCGGGGTaGCGTCCGGGACTGGAGCTG +
Preference number: 5 (lower is better)
Translates to: KQCIGHFQCNTNLLLSNEETAPG*RPGLEL
Trigger: CAGCTCCAGTCCCGGACGCAACCCCGGAGCCGTCTC...CTCGTTACTCAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCACTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000522484.5
ENST00000523739.5
CDS-3UTR CAA 90 bp AGAGTCTGGAGATGGATGCTGCTGGCGAGGCAGGTTCACCACAGTCCTGTTCTCAAACCACACTGCTTTTaGCTCGATGGCTTCACAACT +
Preference number: 5 (lower is better)
Translates to: RVWRWMLLARQVHHSPVLKPHCF*LDGFTT
Trigger: AGTTGTGAAGCCATCGAGCAAAAAGCAGTGTGGTTT...GAGAACAGGACTGTGGTGAACCTGCCTCGCCAGCAGCATCCATCTCCAGACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
CDS-3UTR CAA 90 bp AGTAATTGCTACTGCAGAAGTGCCATGATTTGCTGTAGCTCCTGTGCTGGTTCCGGGACCTGCAAATTGTaGCTCTGTGCCAGGCCAGTG +
Preference number: 5 (lower is better)
Translates to: SNCYCRSAMICCSSCAGSGTCKL*LCARPV
Trigger: CACTGGCCTGGCACAGAGCAACAATTTGCAGGTCCC...GGAACCAGCACAGGAGCTACAGCAAATCATGGCACTTCTGCAGTAGCAATTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
CDS GCA 90 bp AGTCAGGAAACCTGGTGTTCCCCATGCAACAGCATGAAACCACACTaGTTTTTGCTCGATGGCTTCACAACTCCATTTCCACCGCGGCAA +
Preference number: 5 (lower is better)
Translates to: SQETWCSPCNSMKPH*FLLDGFTTPFPPRQ
Trigger: TTGCCGCGGTGGAAATGGAGTTGTGAAGCCATCGAGCAAAAAGCAGTGTGGTTTCATGCTGTTGCATGGGGAACACCAGGTTTCCTGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519011.5
CDS-3UTR CAA 90 bp ATGATTTGCTGTAGCTCCTGTGCTGGTTCCCATGGATTTGGAAATGACCTTCAGGGGACCTGCAAATTGTaGCTCTGTGCCAGGCCAGTG +
Preference number: 5 (lower is better)
Translates to: MICCSSCAGSHGFGNDLQGTCKL*LCARPV
Trigger: CACTGGCCTGGCACAGAGCAACAATTTGCAGGTCCC...CTGAAGGTCATTTCCAAATCCATGGGAACCAGCACAGGAGCTACAGCAAATCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
CDS-3UTR CAA 90 bp ACCTGGTGTTCCCCATGCAACAGCATGAAACCACACTGCTTTTTGCTCGATGGCTGGATGAATCACTCTTaGCATCCTCAGAAGATCCCC +
Preference number: 5 (lower is better)
Translates to: TWCSPCNSMKPHCFLLDGWMNHS*HPQKIP
Trigger: GGGGATCTTCTGAGGATGCAAAGAGTGATTCATCCA...GCCATCGAGCAAAAAGCAGTGTGGTTTCATGCTGTTGCATGGGGAACACCAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000523933.5
CDS-3UTR CAA 90 bp AGTCTGGAGATGGATGCTGCTGGCGAGGCAGGTTCACCACAGTCCTGTTCTCTTATTTTACCACATGGCTaGGATGAATCACTCTTTGCA +
Preference number: 5 (lower is better)
Translates to: SLEMDAAGEAGSPQSCSLILPHG*DESLFA
Trigger: TGCAAAGAGTGATTCATCCAAGCCATGTGGTAAAAT...AAGAGAACAGGACTGTGGTGAACCTGCCTCGCCAGCAGCATCCATCTCCAGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
CDS-3UTR CAA 90 bp AGTCTGGAGATGGATGCTGCTGGCGAGGCAGGTTCACCACAGTCCTGTTCTCTTCAAACTCCACTAATGTaGTCTCCTTCAACTTTGTTC +
Preference number: 5 (lower is better)
Translates to: SLEMDAAGEAGSPQSCSLQTPLM*SPSTLF
Trigger: GAACAAAGTTGAAGGAGACAACATTAGTGGAGTTTG...AAGAGAACAGGACTGTGGTGAACCTGCCTCGCCAGCAGCATCCATCTCCAGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
CDS-3UTR CAA 90 bp TGTTCTCTTAACCTGGGGGTGCTAGCTCCGTCCGCTTTCACCTCTCTCATTGATGGTAATCCTGTTCACTaGCTCATAGACGTAACATCC +
Preference number: 5 (lower is better)
Translates to: CSLNLGVLAPSAFTSLIDGNPVH*LIDVTS
Trigger: GGATGTTACGTCTATGAGCAAGTGAACAGGATTACC...ATCAATGAGAGAGGTGAAAGCGGACGGAGCTAGCACCCCCAGGTTAAGAGAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000523933.5
CDS-3UTR CAA 90 bp GCACAGTGGCAAGAGTACAAAGTAGCGAGAAGCATCCAGGTCATAAAGGCCAACGTCGAGCTTTTGCTTTaGCCTGATAAGGACATGGGA +
Preference number: 5 (lower is better)
Translates to: AQWQEYKVARSIQVIKANVELLL*PDKDMG
Trigger: TCCCATGTCCTTATCAGGCAAAAGCAAAAGCTCGAC...GTTGGCCTTTATGACCTGGATGCTTCTCGCTACTTTGTACTCTTGCCACTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000523933.5
CDS-3UTR CAA 90 bp TTGGTTCTGAAGAACTGGGGACCTGCAAATTGTTGCTCTGTGCCAGGCCAGTGTATTCTGGTCGAGCTTTaGCTTTTGCCTGATAAGGAC +
Preference number: 5 (lower is better)
Translates to: LVLKNWGPANCCSVPGQCILVEL*LLPDKD
Trigger: GTCCTTATCAGGCAAAAGCAAAAGCTCGACCAGAAT...ACACTGGCCTGGCACAGAGCAACAATTTGCAGGTCCCCAGTTCTTCAGAACCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519011.5
ENST00000521195.1
CDS-3UTR CAA 90 bp AGTCTGGAGATGGATGCTGCTGGCGAGGCAGGTTCACCACAGTCCTGTTCTCTTCAGTGTAACACAAATTaGCTTCTGAGTAACGAGAGA +
Preference number: 5 (lower is better)
Translates to: SLEMDAAGEAGSPQSCSLQCNTN*LLSNER
Trigger: TCTCTCGTTACTCAGAAGCAAATTTGTGTTACACTG...AAGAGAACAGGACTGTGGTGAACCTGCCTCGCCAGCAGCATCCATCTCCAGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
CDS-3UTR CAA 90 bp TGGACTAATCCTTCCTTCACTCCGCGCACTTTCAGATACACTGCCTGCCTGGCCGGAAAGTTTCAATGTTaGGTGAACATTCCAGATTTG +
Preference number: 5 (lower is better)
Translates to: WTNPSFTPRTFRYTACLAGKFQC*VNIPDL
Trigger: CAAATCTGGAATGTTCACCAAACATTGAAACTTTCC...GGCCAGGCAGGCAGTGTATCTGAAAGTGCGCGGAGTGAAGGAAGGATTAGTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521195.1
ENST00000522484.5
CDS-3UTR CAA 90 bp TTTGGACTAATCCTTCCTTCACTCCGCGCACTTTCAGATACACTGCCTGCCTGGCAGAAACTTATATCCTaGTCCCCCAGAAGTCTTAAG +
Preference number: 5 (lower is better)
Translates to: FGLILPSLRALSDTLPAWQKLIS*SPRSLK
Trigger: CTTAAGACTTCTGGGGGACAAGGATATAAGTTTCTG...CCAGGCAGGCAGTGTATCTGAAAGTGCGCGGAGTGAAGGAAGGATTAGTCCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521195.1
ENST00000522484.5
CDS-3UTR CAA 90 bp TGCTGTAGCTCCTGTGCTGGTTCCCATGGATTTGGAAATGACCTTCAGCTTGTGAAACCACACTGCTTTTaGCTCGATGGCTTCACAACT +
Preference number: 5 (lower is better)
Translates to: CCSSCAGSHGFGNDLQLVKPHCF*LDGFTT
Trigger: AGTTGTGAAGCCATCGAGCAAAAAGCAGTGTGGTTT...CACAAGCTGAAGGTCATTTCCAAATCCATGGGAACCAGCACAGGAGCTACAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000523933.5
CDS-3UTR CAA 90 bp TGCCAGCTAAAAGAAGAGAGAGCCCAACAAACACACAAAGGCACAGTGGCAAGAGTTCCGGCCATCATGTaGTATGACTTGTCGAACATG +
Preference number: 5 (lower is better)
Translates to: CQLKEERAQQTHKGTVARVPAIM*YDLSNM
Trigger: CATGTTCGACAAGTCATACAACATGATGGCCGGAAC...TCTTGCCACTGTGCCTTTGTGTGTTTGTTGGGCTCTCTCTTCTTTTAGCTGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000523933.5
CDS-3UTR CAA 90 bp GTAGCTCCTGTGCTGGTTCCCATGGATTTGGAAATGACCTTCAGCTTGTGTGAAGTTCCGGCCATCATGTaGTATGACTTGTCGAACATG +
Preference number: 5 (lower is better)
Translates to: VAPVLVPMDLEMTFSLCEVPAIM*YDLSNM
Trigger: CATGTTCGACAAGTCATACAACATGATGGCCGGAAC...TTCACACAAGCTGAAGGTCATTTCCAAATCCATGGGAACCAGCACAGGAGCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000523933.5
CDS-3UTR CAA 90 bp AAACACACAAAGGCACAGTGGCAAGAGTACAAAGTAGCGAGAAGCATCCAGGTCGTCGAGCTTTTGCTTTaGCCTGATAAGGACATGGGA +
Preference number: 5 (lower is better)
Translates to: KHTKAQWQEYKVARSIQVVELLL*PDKDMG
Trigger: TCCCATGTCCTTATCAGGCAAAAGCAAAAGCTCGAC...GACCTGGATGCTTCTCGCTACTTTGTACTCTTGCCACTGTGCCTTTGTGTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000523933.5
CDS-3UTR CAA 90 bp CACACAAAGGCACAGTGGCAAGAGTACAAAGTAGCGAGAAGCATCCAGGTCATACTGGTTCCCATGGATTaGGAAATGACCTTCAGCTTG +
Preference number: 5 (lower is better)
Translates to: HTKAQWQEYKVARSIQVILVPMD*EMTFSL
Trigger: CAAGCTGAAGGTCATTTCCAAATCCATGGGAACCAG...TATGACCTGGATGCTTCTCGCTACTTTGTACTCTTGCCACTGTGCCTTTGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000523933.5
CDS-3UTR CAA 90 bp AAACAGTGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGAGTAACGAGCTGGGGACCTGCAAATaGTTGCTCTGTGCCAGGCCA +
Preference number: 5 (lower is better)
Translates to: KQCIGHFQCNTNLLLSNELGTCK*LLCARP
Trigger: TGGCCTGGCACAGAGCAACAATTTGCAGGTCCCCAG...CTCGTTACTCAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCACTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS TCA 90 bp AGAAGCATAACAGTCAGGAAACCTGGTGTTCCCCATGCAACAGCATaGAACCACACTGCTTTTTGCTCGATGGCTTCACAACTCCATTTC +
Preference number: 5 (lower is better)
Translates to: RSITVRKPGVPHATA*NHTAFCSMASQLHF
Trigger: GAAATGGAGTTGTGAAGCCATCGAGCAAAAAGCAGTGTGGTTTCATGCTGTTGCATGGGGAACACCAGGTTTCCTGACTGTTATGCTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519011.5
CDS-3UTR CAA 90 bp AGTTATCTCCCAGGTAATCCTGTTCACTTGCTCATAGACGTAACATCCGAGAAGTTCTCATCTGCCTTATaGCAGGCTGTGCTATCGCCT +
Preference number: 5 (lower is better)
Translates to: SYLPGNPVHLLIDVTSEKFSSAL*QAVLSP
Trigger: AGGCGATAGCACAGCCTGCAATAAGGCAGATGAGAA...CTTCTCGGATGTTACGTCTATGAGCAAGTGAACAGGATTACCTGGGAGATAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521195.1
CDS-3UTR CAA 90 bp AGTAATTGCTACTGCAGAAGTGCCATGATTTGCTGTAGCTCCTGTGCTGGTTCCAAACCACACTGCTTTTaGCTCGATGGCTTCACAACT +
Preference number: 5 (lower is better)
Translates to: SNCYCRSAMICCSSCAGSKPHCF*LDGFTT
Trigger: AGTTGTGAAGCCATCGAGCAAAAAGCAGTGTGGTTT...GGAACCAGCACAGGAGCTACAGCAAATCATGGCACTTCTGCAGTAGCAATTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000523933.5
CDS-3UTR CAA 90 bp AGGACATGGGATATGGTACTGACGACAATGATCAGAGACCCAAGTTATCTCCCAGTTCCGGCCATCATGTaGTATGACTTGTCGAACATG +
Preference number: 5 (lower is better)
Translates to: RTWDMVLTTMIRDPSYLPVPAIM*YDLSNM
Trigger: CATGTTCGACAAGTCATACAACATGATGGCCGGAAC...TGGGAGATAACTTGGGTCTCTGATCATTGTCGTCAGTACCATATCCCATGTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000523933.5
CDS-3UTR CAA 90 bp TGGTCGAGCTTTTGCTTTTGCCTGATAAGGACATGGGATATGGTACTGACGACACTGGTTCCCATGGATTaGGAAATGACCTTCAGCTTG +
Preference number: 5 (lower is better)
Translates to: WSSFCFCLIRTWDMVLTTLVPMD*EMTFSL
Trigger: CAAGCTGAAGGTCATTTCCAAATCCATGGGAACCAG...TGTCGTCAGTACCATATCCCATGTCCTTATCAGGCAAAAGCAAAAGCTCGACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000523933.5
CDS-3UTR CAA 90 bp TGTGCCAGGCCAGTGTCAGTAATATCACTCTTTGGACTAATCCTTCCTTCACTCCTGGTTCCCATGGATTaGGAAATGACCTTCAGCTTG +
Preference number: 5 (lower is better)
Translates to: CARPVSVISLFGLILPSLLVPMD*EMTFSL
Trigger: CAAGCTGAAGGTCATTTCCAAATCCATGGGAACCAG...GAGTGAAGGAAGGATTAGTCCAAAGAGTGATATTACTGACACTGGCCTGGCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
CDS-3UTR CAA 90 bp GCACAGTGGCAAGAGTACAAAGTAGCGAGAAGCATCCAGGTCATAAAGGCCAACCTTTCACCTCTCTCATaGATGTTTCTGGTGAGGTTT +
Preference number: 5 (lower is better)
Translates to: AQWQEYKVARSIQVIKANLSPLS*MFLVRF
Trigger: AAACCTCACCAGAAACATCAATGAGAGAGGTGAAAG...GTTGGCCTTTATGACCTGGATGCTTCTCGCTACTTTGTACTCTTGCCACTGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000523933.5
CDS-3UTR CAA 90 bp GCACTAATATCGCTATCACACTTTTTAATGTTCAGCAAAATCCTAGTGAGCTGCGGGACCTGCAAATTGTaGCTCTGTGCCAGGCCAGTG +
Preference number: 5 (lower is better)
Translates to: ALISLSHFLMFSKILVSCGTCKL*LCARPV
Trigger: CACTGGCCTGGCACAGAGCAACAATTTGCAGGTCCC...GCAGCTCACTAGGATTTTGCTGAACATTAAAAAGTGTGATAGCGATATTAGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358755.5
ENST00000522484.5
ENST00000522566.5
CDS-3UTR CAA 90 bp GCCATGATTTGCTGTAGCTCCTGTGCTGGTTCCCATGGATTTGGAAATGACCTTTGGAACCACATGAATTaGTTCTATGCAGGTTGGTAC +
Preference number: 5 (lower is better)
Translates to: AMICCSSCAGSHGFGNDLWNHMN*FYAGWY
Trigger: GTACCAACCTGCATAGAACAAATTCATGTGGTTCCA...AAGGTCATTTCCAAATCCATGGGAACCAGCACAGGAGCTACAGCAAATCATGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000521195.1
ENST00000522484.5
ENST00000523933.5
CDS-3UTR CAA 90 bp TTTGGACTAATCCTTCCTTCACTCCGCGCACTTTCAGATACACTGCCTGCCTGGTTGTCTCCTTCAACTTaGTTCATAGCAAGAAGCATA +
Preference number: 5 (lower is better)
Translates to: FGLILPSLRALSDTLPAWLSPST*FIARSI
Trigger: TATGCTTCTTGCTATGAACAAAGTTGAAGGAGACAA...CCAGGCAGGCAGTGTATCTGAAAGTGCGCGGAGTGAAGGAAGGATTAGTCCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
CDS-3UTR CAA 90 bp TACAAAGTAGCGAGAAGCATCCAGGTCATAAAGGCCAACAAAGCAAACTCCACTGTCGAGCTTTTGCTTTaGCCTGATAAGGACATGGGA +
Preference number: 5 (lower is better)
Translates to: YKVARSIQVIKANKANSTVELLL*PDKDMG
Trigger: TCCCATGTCCTTATCAGGCAAAAGCAAAAGCTCGAC...AGTGGAGTTTGCTTTGTTGGCCTTTATGACCTGGATGCTTCTCGCTACTTTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000523933.5
CDS-3UTR CAA 90 bp AAACACACAAAGGCACAGTGGCAAGAGTACAAAGTAGCGAGAAGCATCCAGGTCCTTTCACCTCTCTCATaGATGTTTCTGGTGAGGTTT +
Preference number: 5 (lower is better)
Translates to: KHTKAQWQEYKVARSIQVLSPLS*MFLVRF
Trigger: AAACCTCACCAGAAACATCAATGAGAGAGGTGAAAG...GACCTGGATGCTTCTCGCTACTTTGTACTCTTGCCACTGTGCCTTTGTGTGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000523933.5
CDS-3UTR CAA 90 bp TCACACTTTTTAATGTTCAGCAAAATCCTAGTGAGCTGCCGAAATGAATTCTACGGGACCTGCAAATTGTaGCTCTGTGCCAGGCCAGTG +
Preference number: 5 (lower is better)
Translates to: SHFLMFSKILVSCRNEFYGTCKL*LCARPV
Trigger: CACTGGCCTGGCACAGAGCAACAATTTGCAGGTCCC...GTAGAATTCATTTCGGCAGCTCACTAGGATTTTGCTGAACATTAAAAAGTGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358755.5
ENST00000522484.5
ENST00000522566.5
CDS-3UTR CAA 90 bp ATTCTTACAAAACAGTGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGGGGACCTGCAAATTGTaGCTCTGTGCCAGGCCAGTG +
Preference number: 5 (lower is better)
Translates to: ILTKQCIGHFQCNTNLLLGTCKL*LCARPV
Trigger: CACTGGCCTGGCACAGAGCAACAATTTGCAGGTCCC...CAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCACTGTTTTGTAAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR CAA 90 bp TCACACTTTTTAATGTTCAGCAAAATCCTAGTGAGCTGCCGAAATGAATTCTACCTGGGGACCTGCAAATaGTTGCTCTGTGCCAGGCCA +
Preference number: 5 (lower is better)
Translates to: SHFLMFSKILVSCRNEFYLGTCK*LLCARP
Trigger: TGGCCTGGCACAGAGCAACAATTTGCAGGTCCCCAG...GTAGAATTCATTTCGGCAGCTCACTAGGATTTTGCTGAACATTAAAAAGTGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358755.5
ENST00000522484.5
ENST00000522566.5
CDS-3UTR CAA 90 bp TACAAAGTAGCGAGAAGCATCCAGGTCATAAAGGCCAACAAAGCAAACTCCACTAGAGATGTGGAACCTTaGAGGCTGCTTGGTTCTGAA +
Preference number: 5 (lower is better)
Translates to: YKVARSIQVIKANKANSTRDVEP*RLLGSE
Trigger: TTCAGAACCAAGCAGCCTCAAAGGTTCCACATCTCT...AGTGGAGTTTGCTTTGTTGGCCTTTATGACCTGGATGCTTCTCGCTACTTTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519011.5
ENST00000521195.1
CDS-3UTR CAA 90 bp GTAGCTCCTGTGCTGGTTCCCATGGATTTGGAAATGACCTTCAGCTTGTGTGAACATACATCACATGGCTaGGATGAATCACTCTTTGCA +
Preference number: 5 (lower is better)
Translates to: VAPVLVPMDLEMTFSLCEHTSHG*DESLFA
Trigger: TGCAAAGAGTGATTCATCCAAGCCATGTGATGTATG...TTCACACAAGCTGAAGGTCATTTCCAAATCCATGGGAACCAGCACAGGAGCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523933.5
CDS-3UTR CAA 90 bp CTAGCTCCGTCCGCTTTCACCTCTCTCATTGATGTTTCTGGTGAGGTTTGGATTATTTTACCACATGGCTaGGATGAATCACTCTTTGCA +
Preference number: 5 (lower is better)
Translates to: LAPSAFTSLIDVSGEVWIILPHG*DESLFA
Trigger: TGCAAAGAGTGATTCATCCAAGCCATGTGGTAAAAT...AATCCAAACCTCACCAGAAACATCAATGAGAGAGGTGAAAGCGGACGGAGCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
CDS-3UTR CAA 90 bp GCCATGATTTGCTGTAGCTCCTGTGCTGGTTCCCATGGATTTGGAAATGACCTTGTTGGTACAAATGCTTaGCAGAGGAAAGTTTCAATG +
Preference number: 5 (lower is better)
Translates to: AMICCSSCAGSHGFGNDLVGTNA*QRKVSM
Trigger: CATTGAAACTTTCCTCTGCAAAGCATTTGTACCAAC...AAGGTCATTTCCAAATCCATGGGAACCAGCACAGGAGCTACAGCAAATCATGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000521195.1
ENST00000522484.5
ENST00000523933.5
CDS-3UTR CAA 90 bp AAACAGTGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGAGTAACGAGTTCTCATCTGCCTTATaGCAGGCTGTGCTATCGCCT +
Preference number: 5 (lower is better)
Translates to: KQCIGHFQCNTNLLLSNEFSSAL*QAVLSP
Trigger: AGGCGATAGCACAGCCTGCAATAAGGCAGATGAGAA...CTCGTTACTCAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCACTGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358755.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR CAA 90 bp AGTTATCTCCCAGGTAATCCTGTTCACTTGCTCATAGACGTAACATCCGAGAAGGGTAATCCTGTTCACTaGCTCATAGACGTAACATCC +
Preference number: 5 (lower is better)
Translates to: SYLPGNPVHLLIDVTSEKGNPVH*LIDVTS
Trigger: GGATGTTACGTCTATGAGCAAGTGAACAGGATTACC...CTTCTCGGATGTTACGTCTATGAGCAAGTGAACAGGATTACCTGGGAGATAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000523933.5
CDS-3UTR CAA 90 bp CACACAAAGGCACAGTGGCAAGAGTACAAAGTAGCGAGAAGCATCCAGGTCATACAGTGTAACACAAATTaGCTTCTGAGTAACGAGAGA +
Preference number: 5 (lower is better)
Translates to: HTKAQWQEYKVARSIQVIQCNTN*LLSNER
Trigger: TCTCTCGTTACTCAGAAGCAAATTTGTGTTACACTG...TATGACCTGGATGCTTCTCGCTACTTTGTACTCTTGCCACTGTGCCTTTGTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519011.5
ENST00000521195.1
CDS-3UTR CAA 90 bp AAACAGTGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGAGTAACGAGTGGATGAATCACTCTTaGCATCCTCAGAAGATCCCC +
Preference number: 5 (lower is better)
Translates to: KQCIGHFQCNTNLLLSNEWMNHS*HPQKIP
Trigger: GGGGATCTTCTGAGGATGCAAAGAGTGATTCATCCA...CTCGTTACTCAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCACTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR CAA 90 bp CACAAAGGCACAGTGGCAAGAGTACAAAGTAGCGAGAAGCATCCAGGTCATAAAATTTTACCACATGGCTaGGATGAATCACTCTTTGCA +
Preference number: 5 (lower is better)
Translates to: HKGTVARVQSSEKHPGHKILPHG*DESLFA
Trigger: TGCAAAGAGTGATTCATCCAAGCCATGTGGTAAAAT...TTTATGACCTGGATGCTTCTCGCTACTTTGTACTCTTGCCACTGTGCCTTTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519011.5
ENST00000521195.1
CDS-3UTR CAA 90 bp TGCCAGGCCAGTGTCAGTAATATCACTCTTTGGACTAATCCTTCCTTCACTCCGGGAAAGTTTCAATGTTaGGTGAACATTCCAGATTTG +
Preference number: 5 (lower is better)
Translates to: CQASVSNITLWTNPSFTPGKFQC*VNIPDL
Trigger: CAAATCTGGAATGTTCACCAAACATTGAAACTTTCC...CGGAGTGAAGGAAGGATTAGTCCAAAGAGTGATATTACTGACACTGGCCTGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521195.1
ENST00000522484.5
CDS-3UTR CAA 90 bp TCCCCCAGAAGTCTTAAGATGCCTTGGACACCAAAATCCAATGTCTCTTTGGACGTTGGTACAAATGCTTaGCAGAGGAAAGTTTCAATG +
Preference number: 5 (lower is better)
Translates to: SPRSLKMPWTPKSNVSLDVGTNA*QRKVSM
Trigger: CATTGAAACTTTCCTCTGCAAAGCATTTGTACCAAC...GTCCAAAGAGACATTGGATTTTGGTGTCCAAGGCATCTTAAGACTTCTGGGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521195.1
CDS-3UTR CAA 90 bp AGGACATGGGATATGGTACTGACGACAATGATCAGAGACCCAAGTTATCTCCCAGTTGGTACAAATGCTTaGCAGAGGAAAGTTTCAATG +
Preference number: 5 (lower is better)
Translates to: RTWDMVLTTMIRDPSYLPVGTNA*QRKVSM
Trigger: CATTGAAACTTTCCTCTGCAAAGCATTTGTACCAAC...TGGGAGATAACTTGGGTCTCTGATCATTGTCGTCAGTACCATATCCCATGTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521195.1
ENST00000523933.5
CDS-3UTR CAA 90 bp AAACAGTGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGAGTAACGAGGTTCCGGCCATCATGTaGTATGACTTGTCGAACATG +
Preference number: 5 (lower is better)
Translates to: KQCIGHFQCNTNLLLSNEVPAIM*YDLSNM
Trigger: CATGTTCGACAAGTCATACAACATGATGGCCGGAAC...CTCGTTACTCAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCACTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR CAA 90 bp CGAGAGAAAATGTTCTTCAAGTATCTGAATGACAACCACCTCCCTGCTCTTTTCGGTAATCCTGTTCACTaGCTCATAGACGTAACATCC +
Preference number: 5 (lower is better)
Translates to: REKMFFKYLNDNHLPALFGNPVH*LIDVTS
Trigger: GGATGTTACGTCTATGAGCAAGTGAACAGGATTACC...GAAAAGAGCAGGGAGGTGGTTGTCATTCAGATACTTGAAGAACATTTTCTCTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
CDS-3UTR CAA 90 bp AAACAGTGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGAGTAACGAGGTCGAGCTTTTGCTTTaGCCTGATAAGGACATGGGA +
Preference number: 5 (lower is better)
Translates to: KQCIGHFQCNTNLLLSNEVELLL*PDKDMG
Trigger: TCCCATGTCCTTATCAGGCAAAAGCAAAAGCTCGAC...CTCGTTACTCAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCACTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522566.5
ENST00000523739.5
CDS-3UTR CAA 90 bp CTGATAAGGACATGGGATATGGTACTGACGACAATGATCAGAGACCCAAGTTATATTCTGGTCGAGCTTTaGCTTTTGCCTGATAAGGAC +
Preference number: 5 (lower is better)
Translates to: LIRTWDMVLTTMIRDPSYILVEL*LLPDKD
Trigger: GTCCTTATCAGGCAAAAGCAAAAGCTCGACCAGAAT...ATAACTTGGGTCTCTGATCATTGTCGTCAGTACCATATCCCATGTCCTTATCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000523933.5
CDS-3UTR CAA 90 bp AAACAGTGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGAGTAACGAGCTGGTTCCCATGGATTaGGAAATGACCTTCAGCTTG +
Preference number: 5 (lower is better)
Translates to: KQCIGHFQCNTNLLLSNELVPMD*EMTFSL
Trigger: CAAGCTGAAGGTCATTTCCAAATCCATGGGAACCAG...CTCGTTACTCAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCACTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR CAA 90 bp TACAAAGTAGCGAGAAGCATCCAGGTCATAAAGGCCAACAAAGCAAACTCCACTCTTTCACCTCTCTCATaGATGTTTCTGGTGAGGTTT +
Preference number: 5 (lower is better)
Translates to: YKVARSIQVIKANKANSTLSPLS*MFLVRF
Trigger: AAACCTCACCAGAAACATCAATGAGAGAGGTGAAAG...AGTGGAGTTTGCTTTGTTGGCCTTTATGACCTGGATGCTTCTCGCTACTTTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000523933.5
CDS TCA 90 bp GCAGGTTGGTACAAATGCTTTGCAGAGGAAAGTTTCAATGTTTGGTaGACATTCCAGATTTGCGAGAGGAAGAAAATGCTCCATTTCCAC +
Preference number: 5 (lower is better)
Translates to: AGWYKCFAEESFNVW*TFQICERKKMLHFH
Trigger: GTGGAAATGGAGCATTTTCTTCCTCTCGCAAATCTGGAATGTTCACCAAACATTGAAACTTTCCTCTGCAAAGCATTTGTACCAACCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358755.5
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
ENST00000523933.5
CDS-3UTR CAA 90 bp GCACTAATATCGCTATCACACTTTTTAATGTTCAGCAAAATCCTAGTGAGCTGCTGGATGAATCACTCTTaGCATCCTCAGAAGATCCCC +
Preference number: 5 (lower is better)
Translates to: ALISLSHFLMFSKILVSCWMNHS*HPQKIP
Trigger: GGGGATCTTCTGAGGATGCAAAGAGTGATTCATCCA...GCAGCTCACTAGGATTTTGCTGAACATTAAAAAGTGTGATAGCGATATTAGTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358755.5
ENST00000522484.5
ENST00000522566.5
CDS-3UTR CAA 90 bp TGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGAGTAACGAGAGAAAATGGATGAATCACTCTTaGCATCCTCAGAAGATCCCC +
Preference number: 5 (lower is better)
Translates to: CIGHFQCNTNLLLSNERKWMNHS*HPQKIP
Trigger: GGGGATCTTCTGAGGATGCAAAGAGTGATTCATCCA...TTTTCTCTCGTTACTCAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR CAA 90 bp GTACAAAGTAGCGAGAAGCATCCAGGTCATAAAGGCCAACAAAGCAAACTCCACGGAAAGTTTCAATGTTaGGTGAACATTCCAGATTTG +
Preference number: 5 (lower is better)
Translates to: VQSSEKHPGHKGQQSKLHGKFQC*VNIPDL
Trigger: CAAATCTGGAATGTTCACCAAACATTGAAACTTTCC...GTGGAGTTTGCTTTGTTGGCCTTTATGACCTGGATGCTTCTCGCTACTTTGTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521195.1
ENST00000523933.5
CDS-3UTR CAA 90 bp GAGCTTTTGCTTTTGCCTGATAAGGACATGGGATATGGTACTGACGACAATGATCAGAAACTTATATCCTaGTCCCCCAGAAGTCTTAAG +
Preference number: 5 (lower is better)
Translates to: ELLLLPDKDMGYGTDDNDQKLIS*SPRSLK
Trigger: CTTAAGACTTCTGGGGGACAAGGATATAAGTTTCTG...ATCATTGTCGTCAGTACCATATCCCATGTCCTTATCAGGCAAAAGCAAAAGCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000521195.1
CDS-3UTR CAA 90 bp GCAAAAGAAGAATGTAACAGTGATTCTTACAAAACAGTGCATAGGTCACTTCCATTCTCATCTGCCTTATaGCAGGCTGTGCTATCGCCT +
Preference number: 5 (lower is better)
Translates to: AKEECNSDSYKTVHRSLPFSSAL*QAVLSP
Trigger: AGGCGATAGCACAGCCTGCAATAAGGCAGATGAGAA...TGGAAGTGACCTATGCACTGTTTTGTAAGAATCACTGTTACATTCTTCTTTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358755.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR CAA 90 bp ATTCTTACAAAACAGTGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGTTCTCATCTGCCTTATaGCAGGCTGTGCTATCGCCT +
Preference number: 5 (lower is better)
Translates to: ILTKQCIGHFQCNTNLLLFSSAL*QAVLSP
Trigger: AGGCGATAGCACAGCCTGCAATAAGGCAGATGAGAA...CAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCACTGTTTTGTAAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358755.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR CAA 90 bp AAACAGTGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGAGTAACGAGAAACCACACTGCTTTTaGCTCGATGGCTTCACAACT +
Preference number: 5 (lower is better)
Translates to: KQCIGHFQCNTNLLLSNEKPHCF*LDGFTT
Trigger: AGTTGTGAAGCCATCGAGCAAAAAGCAGTGTGGTTT...CTCGTTACTCAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCACTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR CAA 90 bp CACAAAGGCACAGTGGCAAGAGTACAAAGTAGCGAGAAGCATCCAGGTCATAAATTGTCTCCTTCAACTTaGTTCATAGCAAGAAGCATA +
Preference number: 5 (lower is better)
Translates to: HKGTVARVQSSEKHPGHKLSPST*FIARSI
Trigger: TATGCTTCTTGCTATGAACAAAGTTGAAGGAGACAA...TTTATGACCTGGATGCTTCTCGCTACTTTGTACTCTTGCCACTGTGCCTTTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000523933.5
CDS-3UTR CAA 90 bp ATCATGGCTAGTAATTGCTACTGCAGAAGTGCCATGATTTGCTGTAGCTCCTGTCAAACTCCACTAATGTaGTCTCCTTCAACTTTGTTC +
Preference number: 5 (lower is better)
Translates to: IMASNCYCRSAMICCSSCQTPLM*SPSTLF
Trigger: GAACAAAGTTGAAGGAGACAACATTAGTGGAGTTTG...ACAGGAGCTACAGCAAATCATGGCACTTCTGCAGTAGCAATTACTAGCCATGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000523933.5
CDS-3UTR CAA 90 bp TGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGAGTAACGAGAGAAAAGTTCCGGCCATCATGTaGTATGACTTGTCGAACATG +
Preference number: 5 (lower is better)
Translates to: CIGHFQCNTNLLLSNERKVPAIM*YDLSNM
Trigger: CATGTTCGACAAGTCATACAACATGATGGCCGGAAC...TTTTCTCTCGTTACTCAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR CAA 90 bp GCACTAATATCGCTATCACACTTTTTAATGTTCAGCAAAATCCTAGTGAGCTGCAGAGATGTGGAACCTTaGAGGCTGCTTGGTTCTGAA +
Preference number: 5 (lower is better)
Translates to: ALISLSHFLMFSKILVSCRDVEP*RLLGSE
Trigger: TTCAGAACCAAGCAGCCTCAAAGGTTCCACATCTCT...GCAGCTCACTAGGATTTTGCTGAACATTAAAAAGTGTGATAGCGATATTAGTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358755.5
ENST00000522484.5
ENST00000522566.5
CDS-3UTR CAA 90 bp TGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGAGTAACGAGAGAAAAAGAGATGTGGAACCTTaGAGGCTGCTTGGTTCTGAA +
Preference number: 5 (lower is better)
Translates to: CIGHFQCNTNLLLSNERKRDVEP*RLLGSE
Trigger: TTCAGAACCAAGCAGCCTCAAAGGTTCCACATCTCT...TTTTCTCTCGTTACTCAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR CAA 90 bp ATGATTTGCTGTAGCTCCTGTGCTGGTTCCCATGGATTTGGAAATGACCTTCAGAATAGTGGACACTCTTaGAGTAAGCACCTTATTTCA +
Preference number: 5 (lower is better)
Translates to: MICCSSCAGSHGFGNDLQNSGHS*SKHLIS
Trigger: TGAAATAAGGTGCTTACTCAAAGAGTGTCCACTATT...CTGAAGGTCATTTCCAAATCCATGGGAACCAGCACAGGAGCTACAGCAAATCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522484.5
CDS-3UTR CAA 90 bp AAACAGTGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGAGTAACGAGTGGAACCACATGAATTaGTTCTATGCAGGTTGGTAC +
Preference number: 5 (lower is better)
Translates to: KQCIGHFQCNTNLLLSNEWNHMN*FYAGWY
Trigger: GTACCAACCTGCATAGAACAAATTCATGTGGTTCCA...CTCGTTACTCAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCACTGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358755.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR CAA 90 bp AAACAGTGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGAGTAACGAGCAGAAACTTATATCCTaGTCCCCCAGAAGTCTTAAG +
Preference number: 5 (lower is better)
Translates to: KQCIGHFQCNTNLLLSNEQKLIS*SPRSLK
Trigger: CTTAAGACTTCTGGGGGACAAGGATATAAGTTTCTG...CTCGTTACTCAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCACTGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358755.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR CAA 90 bp GCACTAATATCGCTATCACACTTTTTAATGTTCAGCAAAATCCTAGTGAGCTGCAAACCACACTGCTTTTaGCTCGATGGCTTCACAACT +
Preference number: 5 (lower is better)
Translates to: ALISLSHFLMFSKILVSCKPHCF*LDGFTT
Trigger: AGTTGTGAAGCCATCGAGCAAAAAGCAGTGTGGTTT...GCAGCTCACTAGGATTTTGCTGAACATTAAAAAGTGTGATAGCGATATTAGTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358755.5
ENST00000522484.5
ENST00000522566.5
CDS-3UTR CAA 90 bp TGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGAGTAACGAGAGAAAAAAACCACACTGCTTTTaGCTCGATGGCTTCACAACT +
Preference number: 5 (lower is better)
Translates to: CIGHFQCNTNLLLSNERKKPHCF*LDGFTT
Trigger: AGTTGTGAAGCCATCGAGCAAAAAGCAGTGTGGTTT...TTTTCTCTCGTTACTCAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCA
41% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR CAA 90 bp GCAAAAGAAGAATGTAACAGTGATTCTTACAAAACAGTGCATAGGTCACTTCCAGTTCCGGCCATCATGTaGTATGACTTGTCGAACATG +
Preference number: 5 (lower is better)
Translates to: AKEECNSDSYKTVHRSLPVPAIM*YDLSNM
Trigger: CATGTTCGACAAGTCATACAACATGATGGCCGGAAC...TGGAAGTGACCTATGCACTGTTTTGTAAGAATCACTGTTACATTCTTCTTTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR CAA 90 bp TGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGAGTAACGAGAGAAAAGGTAATCCTGTTCACTaGCTCATAGACGTAACATCC +
Preference number: 5 (lower is better)
Translates to: CIGHFQCNTNLLLSNERKGNPVH*LIDVTS
Trigger: GGATGTTACGTCTATGAGCAAGTGAACAGGATTACC...TTTTCTCTCGTTACTCAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR CAA 90 bp GCAAAAGAAGAATGTAACAGTGATTCTTACAAAACAGTGCATAGGTCACTTCCAGTCGAGCTTTTGCTTTaGCCTGATAAGGACATGGGA +
Preference number: 5 (lower is better)
Translates to: AKEECNSDSYKTVHRSLPVELLL*PDKDMG
Trigger: TCCCATGTCCTTATCAGGCAAAAGCAAAAGCTCGAC...TGGAAGTGACCTATGCACTGTTTTGTAAGAATCACTGTTACATTCTTCTTTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522566.5
ENST00000523739.5
CDS-3UTR CAA 90 bp TGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGAGTAACGAGAGAAAAATTCTGGTCGAGCTTTaGCTTTTGCCTGATAAGGAC +
Preference number: 5 (lower is better)
Translates to: CIGHFQCNTNLLLSNERKILVEL*LLPDKD
Trigger: GTCCTTATCAGGCAAAAGCAAAAGCTCGACCAGAAT...TTTTCTCTCGTTACTCAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522566.5
ENST00000523739.5
CDS-3UTR CAA 90 bp ATTCTTACAAAACAGTGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGCTGGTTCCCATGGATTaGGAAATGACCTTCAGCTTG +
Preference number: 5 (lower is better)
Translates to: ILTKQCIGHFQCNTNLLLLVPMD*EMTFSL
Trigger: CAAGCTGAAGGTCATTTCCAAATCCATGGGAACCAG...CAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCACTGTTTTGTAAGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR CAA 90 bp AAACAGTGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGAGTAACGAGCTTTCACCTCTCTCATaGATGTTTCTGGTGAGGTTT +
Preference number: 5 (lower is better)
Translates to: KQCIGHFQCNTNLLLSNELSPLS*MFLVRF
Trigger: AAACCTCACCAGAAACATCAATGAGAGAGGTGAAAG...CTCGTTACTCAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCACTGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR CAA 90 bp ATTCTTACAAAACAGTGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGAGAGATGTGGAACCTTaGAGGCTGCTTGGTTCTGAA +
Preference number: 5 (lower is better)
Translates to: ILTKQCIGHFQCNTNLLLRDVEP*RLLGSE
Trigger: TTCAGAACCAAGCAGCCTCAAAGGTTCCACATCTCT...CAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCACTGTTTTGTAAGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR CAA 90 bp AAACAGTGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGAGTAACGAGGTTGGTACAAATGCTTaGCAGAGGAAAGTTTCAATG +
Preference number: 5 (lower is better)
Translates to: KQCIGHFQCNTNLLLSNEVGTNA*QRKVSM
Trigger: CATTGAAACTTTCCTCTGCAAAGCATTTGTACCAAC...CTCGTTACTCAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCACTGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358755.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR CAA 90 bp TGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGAGTAACGAGAGAAAATGGAACCACATGAATTaGTTCTATGCAGGTTGGTAC +
Preference number: 5 (lower is better)
Translates to: CIGHFQCNTNLLLSNERKWNHMN*FYAGWY
Trigger: GTACCAACCTGCATAGAACAAATTCATGTGGTTCCA...TTTTCTCTCGTTACTCAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358755.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR CAA 90 bp TGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGAGTAACGAGAGAAAACAGAAACTTATATCCTaGTCCCCCAGAAGTCTTAAG +
Preference number: 5 (lower is better)
Translates to: CIGHFQCNTNLLLSNERKQKLIS*SPRSLK
Trigger: CTTAAGACTTCTGGGGGACAAGGATATAAGTTTCTG...TTTTCTCTCGTTACTCAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358755.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR CAA 90 bp ATTCTTACAAAACAGTGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGAAACCACACTGCTTTTaGCTCGATGGCTTCACAACT +
Preference number: 5 (lower is better)
Translates to: ILTKQCIGHFQCNTNLLLKPHCF*LDGFTT
Trigger: AGTTGTGAAGCCATCGAGCAAAAAGCAGTGTGGTTT...CAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCACTGTTTTGTAAGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR CAA 90 bp GAGCTTTTGCTTTTGCCTGATAAGGACATGGGATATGGTACTGACGACAATGATTTGTCTCCTTCAACTTaGTTCATAGCAAGAAGCATA +
Preference number: 5 (lower is better)
Translates to: ELLLLPDKDMGYGTDDNDLSPST*FIARSI
Trigger: TATGCTTCTTGCTATGAACAAAGTTGAAGGAGACAA...ATCATTGTCGTCAGTACCATATCCCATGTCCTTATCAGGCAAAAGCAAAAGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519011.5
ENST00000521195.1
ENST00000523933.5
CDS-3UTR CAA 90 bp GCAAAAGAAGAATGTAACAGTGATTCTTACAAAACAGTGCATAGGTCACTTCCAGGTAATCCTGTTCACTaGCTCATAGACGTAACATCC +
Preference number: 5 (lower is better)
Translates to: AKEECNSDSYKTVHRSLPGNPVH*LIDVTS
Trigger: GGATGTTACGTCTATGAGCAAGTGAACAGGATTACC...TGGAAGTGACCTATGCACTGTTTTGTAAGAATCACTGTTACATTCTTCTTTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR CAA 90 bp ATTCTTACAAAACAGTGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGATTCTGGTCGAGCTTTaGCTTTTGCCTGATAAGGAC +
Preference number: 5 (lower is better)
Translates to: ILTKQCIGHFQCNTNLLLILVEL*LLPDKD
Trigger: GTCCTTATCAGGCAAAAGCAAAAGCTCGACCAGAAT...CAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCACTGTTTTGTAAGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522566.5
ENST00000523739.5
CDS-3UTR CAA 90 bp GCAAAAGAAGAATGTAACAGTGATTCTTACAAAACAGTGCATAGGTCACTTCCAATTCTGGTCGAGCTTTaGCTTTTGCCTGATAAGGAC +
Preference number: 5 (lower is better)
Translates to: AKEECNSDSYKTVHRSLPILVEL*LLPDKD
Trigger: GTCCTTATCAGGCAAAAGCAAAAGCTCGACCAGAAT...TGGAAGTGACCTATGCACTGTTTTGTAAGAATCACTGTTACATTCTTCTTTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522566.5
ENST00000523739.5
CDS-3UTR CAA 90 bp CACTTTTTAATGTTCAGCAAAATCCTAGTGAGCTGCCGAAATGAATTCTACAAACTGGTTCCCATGGATTaGGAAATGACCTTCAGCTTG +
Preference number: 5 (lower is better)
Translates to: HFLMFSKILVSCRNEFYKLVPMD*EMTFSL
Trigger: CAAGCTGAAGGTCATTTCCAAATCCATGGGAACCAG...TTTGTAGAATTCATTTCGGCAGCTCACTAGGATTTTGCTGAACATTAAAAAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358755.5
ENST00000522484.5
ENST00000522566.5
CDS-3UTR CAA 90 bp GCACTAATATCGCTATCACACTTTTTAATGTTCAGCAAAATCCTAGTGAGCTGCCTTTCACCTCTCTCATaGATGTTTCTGGTGAGGTTT +
Preference number: 5 (lower is better)
Translates to: ALISLSHFLMFSKILVSCLSPLS*MFLVRF
Trigger: AAACCTCACCAGAAACATCAATGAGAGAGGTGAAAG...GCAGCTCACTAGGATTTTGCTGAACATTAAAAAGTGTGATAGCGATATTAGTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358755.5
ENST00000522484.5
ENST00000522566.5
CDS-3UTR CAA 90 bp CACTTTTTAATGTTCAGCAAAATCCTAGTGAGCTGCCGAAATGAATTCTACAAAAGAGATGTGGAACCTTaGAGGCTGCTTGGTTCTGAA +
Preference number: 5 (lower is better)
Translates to: HFLMFSKILVSCRNEFYKRDVEP*RLLGSE
Trigger: TTCAGAACCAAGCAGCCTCAAAGGTTCCACATCTCT...TTTGTAGAATTCATTTCGGCAGCTCACTAGGATTTTGCTGAACATTAAAAAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358755.5
ENST00000522484.5
ENST00000522566.5
CDS-3UTR CAA 90 bp TGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGAGTAACGAGAGAAAACATACATCACATGGCTaGGATGAATCACTCTTTGCA +
Preference number: 5 (lower is better)
Translates to: CIGHFQCNTNLLLSNERKHTSHG*DESLFA
Trigger: TGCAAAGAGTGATTCATCCAAGCCATGTGATGTATG...TTTTCTCTCGTTACTCAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523739.5
CDS-3UTR CAA 90 bp CACTTTTTAATGTTCAGCAAAATCCTAGTGAGCTGCCGAAATGAATTCTACAAAAAAGAACCCACTTCCTaGCGGATTTCAGGAGTCAAG +
Preference number: 5 (lower is better)
Translates to: HFLMFSKILVSCRNEFYKKEPTS*RISGVK
Trigger: CTTGACTCCTGAAATCCGCAAGGAAGTGGGTTCTTT...TTTGTAGAATTCATTTCGGCAGCTCACTAGGATTTTGCTGAACATTAAAAAGTG
40% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000522566.5
CDS-3UTR CAA 90 bp AAACAGTGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGAGTAACGAGGGAAAGTTTCAATGTTaGGTGAACATTCCAGATTTG +
Preference number: 5 (lower is better)
Translates to: KQCIGHFQCNTNLLLSNEGKFQC*VNIPDL
Trigger: CAAATCTGGAATGTTCACCAAACATTGAAACTTTCC...CTCGTTACTCAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCACTGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358755.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR CAA 90 bp TGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGAGTAACGAGAGAAAAGTTGGTACAAATGCTTaGCAGAGGAAAGTTTCAATG +
Preference number: 5 (lower is better)
Translates to: CIGHFQCNTNLLLSNERKVGTNA*QRKVSM
Trigger: CATTGAAACTTTCCTCTGCAAAGCATTTGTACCAAC...TTTTCTCTCGTTACTCAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358755.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR CAA 90 bp TCACACTTTTTAATGTTCAGCAAAATCCTAGTGAGCTGCCGAAATGAATTCTACTGGAACCACATGAATTaGTTCTATGCAGGTTGGTAC +
Preference number: 5 (lower is better)
Translates to: SHFLMFSKILVSCRNEFYWNHMN*FYAGWY
Trigger: GTACCAACCTGCATAGAACAAATTCATGTGGTTCCA...GTAGAATTCATTTCGGCAGCTCACTAGGATTTTGCTGAACATTAAAAAGTGTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358755.5
ENST00000522484.5
ENST00000522566.5
CDS-3UTR CAA 90 bp GCAAAAGAAGAATGTAACAGTGATTCTTACAAAACAGTGCATAGGTCACTTCCACAGAAACTTATATCCTaGTCCCCCAGAAGTCTTAAG +
Preference number: 5 (lower is better)
Translates to: AKEECNSDSYKTVHRSLPQKLIS*SPRSLK
Trigger: CTTAAGACTTCTGGGGGACAAGGATATAAGTTTCTG...TGGAAGTGACCTATGCACTGTTTTGTAAGAATCACTGTTACATTCTTCTTTTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000358755.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR CAA 90 bp AAACAGTGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGAGTAACGAGTTGTCTCCTTCAACTTaGTTCATAGCAAGAAGCATA +
Preference number: 5 (lower is better)
Translates to: KQCIGHFQCNTNLLLSNELSPST*FIARSI
Trigger: TATGCTTCTTGCTATGAACAAAGTTGAAGGAGACAA...CTCGTTACTCAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCACTGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR CAA 90 bp TGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGAGTAACGAGAGAAAACAAACTCCACTAATGTaGTCTCCTTCAACTTTGTTC +
Preference number: 5 (lower is better)
Translates to: CIGHFQCNTNLLLSNERKQTPLM*SPSTLF
Trigger: GAACAAAGTTGAAGGAGACAACATTAGTGGAGTTTG...TTTTCTCTCGTTACTCAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR CAA 90 bp CACTTTTTAATGTTCAGCAAAATCCTAGTGAGCTGCCGAAATGAATTCTACAAAGGTAATCCTGTTCACTaGCTCATAGACGTAACATCC +
Preference number: 5 (lower is better)
Translates to: HFLMFSKILVSCRNEFYKGNPVH*LIDVTS
Trigger: GGATGTTACGTCTATGAGCAAGTGAACAGGATTACC...TTTGTAGAATTCATTTCGGCAGCTCACTAGGATTTTGCTGAACATTAAAAAGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358755.5
ENST00000522484.5
ENST00000522566.5
CDS-3UTR CAA 90 bp GCAAAAGAAGAATGTAACAGTGATTCTTACAAAACAGTGCATAGGTCACTTCCACTTTCACCTCTCTCATaGATGTTTCTGGTGAGGTTT +
Preference number: 5 (lower is better)
Translates to: AKEECNSDSYKTVHRSLPLSPLS*MFLVRF
Trigger: AAACCTCACCAGAAACATCAATGAGAGAGGTGAAAG...TGGAAGTGACCTATGCACTGTTTTGTAAGAATCACTGTTACATTCTTCTTTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR CAA 90 bp ATTCTTACAAAACAGTGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGCTTTCACCTCTCTCATaGATGTTTCTGGTGAGGTTT +
Preference number: 5 (lower is better)
Translates to: ILTKQCIGHFQCNTNLLLLSPLS*MFLVRF
Trigger: AAACCTCACCAGAAACATCAATGAGAGAGGTGAAAG...CAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCACTGTTTTGTAAGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR CAA 90 bp TGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGAGTAACGAGAGAAAATTAAACGGAGCCAATTaGCTTTGTAAAGCCAATTGC +
Preference number: 5 (lower is better)
Translates to: CIGHFQCNTNLLLSNERKLNGAN*LCKANC
Trigger: GCAATTGGCTTTACAAAGCAAATTGGCTCCGTTTAA...TTTTCTCTCGTTACTCAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522566.5
CDS-3UTR CAA 90 bp GCAAAAGAAGAATGTAACAGTGATTCTTACAAAACAGTGCATAGGTCACTTCCAATTTTACCACATGGCTaGGATGAATCACTCTTTGCA +
Preference number: 5 (lower is better)
Translates to: AKEECNSDSYKTVHRSLPILPHG*DESLFA
Trigger: TGCAAAGAGTGATTCATCCAAGCCATGTGGTAAAAT...TGGAAGTGACCTATGCACTGTTTTGTAAGAATCACTGTTACATTCTTCTTTTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
CDS-3UTR CAA 90 bp TGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGAGTAACGAGAGAAAAGGAAAGTTTCAATGTTaGGTGAACATTCCAGATTTG +
Preference number: 5 (lower is better)
Translates to: CIGHFQCNTNLLLSNERKGKFQC*VNIPDL
Trigger: CAAATCTGGAATGTTCACCAAACATTGAAACTTTCC...TTTTCTCTCGTTACTCAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358755.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR CAA 90 bp ATTCTTACAAAACAGTGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGGTTGGTACAAATGCTTaGCAGAGGAAAGTTTCAATG +
Preference number: 5 (lower is better)
Translates to: ILTKQCIGHFQCNTNLLLVGTNA*QRKVSM
Trigger: CATTGAAACTTTCCTCTGCAAAGCATTTGTACCAAC...CAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCACTGTTTTGTAAGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358755.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR CAA 90 bp CACTTTTTAATGTTCAGCAAAATCCTAGTGAGCTGCCGAAATGAATTCTACAAATGGAACCACATGAATTaGTTCTATGCAGGTTGGTAC +
Preference number: 5 (lower is better)
Translates to: HFLMFSKILVSCRNEFYKWNHMN*FYAGWY
Trigger: GTACCAACCTGCATAGAACAAATTCATGTGGTTCCA...TTTGTAGAATTCATTTCGGCAGCTCACTAGGATTTTGCTGAACATTAAAAAGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358755.5
ENST00000522484.5
ENST00000522566.5
CDS-3UTR CAA 90 bp TGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGAGTAACGAGAGAAAATTGTCTCCTTCAACTTaGTTCATAGCAAGAAGCATA +
Preference number: 5 (lower is better)
Translates to: CIGHFQCNTNLLLSNERKLSPST*FIARSI
Trigger: TATGCTTCTTGCTATGAACAAAGTTGAAGGAGACAA...TTTTCTCTCGTTACTCAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR CAA 90 bp GCAAAAGAAGAATGTAACAGTGATTCTTACAAAACAGTGCATAGGTCACTTCCACAAACTCCACTAATGTaGTCTCCTTCAACTTTGTTC +
Preference number: 5 (lower is better)
Translates to: AKEECNSDSYKTVHRSLPQTPLM*SPSTLF
Trigger: GAACAAAGTTGAAGGAGACAACATTAGTGGAGTTTG...TGGAAGTGACCTATGCACTGTTTTGTAAGAATCACTGTTACATTCTTCTTTTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR CAA 90 bp TCACACTTTTTAATGTTCAGCAAAATCCTAGTGAGCTGCCGAAATGAATTCTACCAAACTCCACTAATGTaGTCTCCTTCAACTTTGTTC +
Preference number: 5 (lower is better)
Translates to: SHFLMFSKILVSCRNEFYQTPLM*SPSTLF
Trigger: GAACAAAGTTGAAGGAGACAACATTAGTGGAGTTTG...GTAGAATTCATTTCGGCAGCTCACTAGGATTTTGCTGAACATTAAAAAGTGTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358755.5
ENST00000522484.5
ENST00000522566.5
CDS-3UTR CAA 90 bp ATTCTTACAAAACAGTGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGCAGTGTAACACAAATTaGCTTCTGAGTAACGAGAGA +
Preference number: 5 (lower is better)
Translates to: ILTKQCIGHFQCNTNLLLQCNTN*LLSNER
Trigger: TCTCTCGTTACTCAGAAGCAAATTTGTGTTACACTG...CAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCACTGTTTTGTAAGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR CAA 90 bp GCAAAAGAAGAATGTAACAGTGATTCTTACAAAACAGTGCATAGGTCACTTCCACAGTGTAACACAAATTaGCTTCTGAGTAACGAGAGA +
Preference number: 5 (lower is better)
Translates to: AKEECNSDSYKTVHRSLPQCNTN*LLSNER
Trigger: TCTCTCGTTACTCAGAAGCAAATTTGTGTTACACTG...TGGAAGTGACCTATGCACTGTTTTGTAAGAATCACTGTTACATTCTTCTTTTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR CAA 90 bp TGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGAGTAACGAGAGAAAAAATAGTGGACACTCTTaGAGTAAGCACCTTATTTCA +
Preference number: 5 (lower is better)
Translates to: CIGHFQCNTNLLLSNERKNSGHS*SKHLIS
Trigger: TGAAATAAGGTGCTTACTCAAAGAGTGTCCACTATT...TTTTCTCTCGTTACTCAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCA
38% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000358755.5
ENST00000522484.5
ENST00000522566.5
CDS-3UTR CAA 90 bp ATTCTTACAAAACAGTGCATAGGTCACTTCCAGTGTAACACAAATTTGCTTCTGTTGTCTCCTTCAACTTaGTTCATAGCAAGAAGCATA +
Preference number: 5 (lower is better)
Translates to: ILTKQCIGHFQCNTNLLLLSPST*FIARSI
Trigger: TATGCTTCTTGCTATGAACAAAGTTGAAGGAGACAA...CAGAAGCAAATTTGTGTTACACTGGAAGTGACCTATGCACTGTTTTGTAAGAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
CDS-3UTR CAA 90 bp CACTTTTTAATGTTCAGCAAAATCCTAGTGAGCTGCCGAAATGAATTCTACAAACAAACTCCACTAATGTaGTCTCCTTCAACTTTGTTC +
Preference number: 5 (lower is better)
Translates to: HFLMFSKILVSCRNEFYKQTPLM*SPSTLF
Trigger: GAACAAAGTTGAAGGAGACAACATTAGTGGAGTTTG...TTTGTAGAATTCATTTCGGCAGCTCACTAGGATTTTGCTGAACATTAAAAAGTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358755.5
ENST00000522484.5
ENST00000522566.5
CDS CCA 72 bp AGGGACCTGAGACGGCTCCGGGGTTGCGTCCGGGACTaGAGCTGCCTCGAGAGCCGCACGGGGAGCGAGAGC +
Preference number: 6 (lower is better)
Translates to: RDLRRLRGCVRD*SCLESRTGSES
Trigger: GCTCTCGCTCCCCGTGCGGCTCTCGAGGCAGCTCCAGTCCCGGACGCAACCCCGGAGCCGTCTCAGGTCCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522484.5
CDS CAA 72 bp TGTTCCCCATGCAACAGCATGAAACCACACTGCTTTTaGCTCGATGGCTTCACAACTCCATTTCCACCGCGG +
Preference number: 6 (lower is better)
Translates to: CSPCNSMKPHCF*LDGFTTPFPPR
Trigger: CCGCGGTGGAAATGGAGTTGTGAAGCCATCGAGCAAAAAGCAGTGTGGTTTCATGCTGTTGCATGGGGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519011.5
CDS GCA 72 bp ACCTGGTGTTCCCCATGCAACAGCATGAAACCACACTaGTTTTTGCTCGATGGCTTCACAACTCCATTTCCA +
Preference number: 6 (lower is better)
Translates to: TWCSPCNSMKPH*FLLDGFTTPFP
Trigger: TGGAAATGGAGTTGTGAAGCCATCGAGCAAAAAGCAGTGTGGTTTCATGCTGTTGCATGGGGAACACCAGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519011.5
CDS CAA 72 bp AGAGGAAAGTTTCAATGTTTGGTGAACATTCCAGATTaGCGAGAGGAAGAAAATGCTCCATTTCCACCGCGG +
Preference number: 6 (lower is better)
Translates to: RGKFQCLVNIPD*REEENAPFPPR
Trigger: CCGCGGTGGAAATGGAGCATTTTCTTCCTCTCGCAAATCTGGAATGTTCACCAAACATTGAAACTTTCCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358755.5
ENST00000522484.5
ENST00000522566.5
ENST00000523739.5
ENST00000523933.5
CDS TCA 72 bp TTTCTTCAAATTCCTGATTTTACCACATGGCTTGGATaGATCACTCTTTGCATCCTCAGAAGATCCCCATCC +
Preference number: 6 (lower is better)
Translates to: FLQIPDFTTWLG*ITLCILRRSPS
Trigger: GGATGGGGATCTTCTGAGGATGCAAAGAGTGATTCATCCAAGCCATGTGGTAAAATCAGGAATTTGAAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5
CDS CAA 72 bp TCCATTTTCTTCAAATTCCTGATTTTACCACATGGCTaGGATGAATCACTCTTTGCATCCTCAGAAGATCCC +
Preference number: 6 (lower is better)
Translates to: SIFFKFLILPHG*DESLFASSEDP
Trigger: GGGATCTTCTGAGGATGCAAAGAGTGATTCATCCAAGCCATGTGGTAAAATCAGGAATTTGAAGAAAATGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358755.5
ENST00000519011.5
ENST00000521195.1
ENST00000522484.5
ENST00000522566.5