RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FZD3 (Homo sapiens)

Ensembl gene IDs: ENSG00000104290

Ensembl transcript IDs: ENST00000240093.8, ENST00000523546.1, ENST00000537916.2

Found 387 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTGTGGGGCAAAAGCTGTAGCCTACTGGCTATTGGGCAAGGCAAGTaGAGACAATCAACTCACTACAGGAGGGCCTGGAAGCCAAGGTCT +
Preference number: 1 (lower is better)
Translates to: VWGKSCSLLAIGQGK*RQSTHYRRAWKPRS
Trigger: AGACCTTGGCTTCCAGGCCCTCCTGTAGTGAGTTGATTGTCTGCACTTGCCTTGCCCAATAGCCAGTAGGCTACAGCTTTTGCCCCACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
3UTR TCA 90 bp TGTTTACTAATTGTCGGTTATGAGGGAATTCAGACCTGCCTGCTTTaGGCATTAACTCCAGCTCCAAGGAGAAAGGCAATGAACACAGAG +
Preference number: 1 (lower is better)
Translates to: CLLIVGYEGIQTCLL*ALTPAPRRKAMNTE
Trigger: CTCTGTGTTCATTGCCTTTCTCCTTGGAGCTGGAGTTAATGCTCAAAGCAGGCAGGTCTGAATTCCCTCATAACCGACAATTAGTAAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
3UTR GCA 90 bp AGCACATCAGAGAATGTGAAATTCCCAGTTCATGCTCTAACCAAGTaGACTTGCCCTGTACATCCCAACAACAGCAACTTTTCCACTCAT +
Preference number: 1 (lower is better)
Translates to: STSENVKFPVHALTK*TCPVHPNNSNFSTH
Trigger: ATGAGTGGAAAAGTTGCTGTTGTTGGGATGTACAGGGCAAGTGCACTTGGTTAGAGCATGAACTGGGAATTTCACATTCTCTGATGTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
3UTR TCA 90 bp AAAGCTACCAATTCTTATTTGTATGAGAGGAAGGTGTTAGGCATCTaGAGTAACCCAAGTGATTCTTATCTGCAGTCAGGGTTGAGGACC +
Preference number: 1 (lower is better)
Translates to: KATNSYLYERKVLGI*SNPSDSYLQSGLRT
Trigger: GGTCCTCAACCCTGACTGCAGATAAGAATCACTTGGGTTACTTCAGATGCCTAACACCTTCCTCTCATACAAATAAGAATTGGTAGCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
3UTR TCA 90 bp TTATATGTTTGGCTTTCAGAGAAAATGTTTACTAATTGTCGGTTATaGGGGAATTCAGACCTGCCTGCTTTGAGCATTAACTCCAGCTCC +
Preference number: 1 (lower is better)
Translates to: LYVWLSEKMFTNCRL*GNSDLPALSINSSS
Trigger: GGAGCTGGAGTTAATGCTCAAAGCAGGCAGGTCTGAATTCCCTCATAACCGACAATTAGTAAACATTTTCTCTGAAAGCCAAACATATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
3UTR TCA 90 bp CCTAACCCAACACCCAGATTTGAACCAGTGTTCAAAAGACTGATATaGGCTAATGTAGACAATCAGAGCAAACACAATGATTTTCAAAGG +
Preference number: 1 (lower is better)
Translates to: PNPTPRFEPVFKRLI*ANVDNQSKHNDFQR
Trigger: CCTTTGAAAATCATTGTGTTTGCTCTGATTGTCTACATTAGCTCATATCAGTCTTTTGAACACTGGTTCAAATCTGGGTGTTGGGTTAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
3UTR TCA 90 bp AAAAGCAATCATTTACCTTTCCAGTGGACACAATCTGTACTTGACTaGAAGCATGTTAACTGTGAGTTACAGCTATCAGTCATGCAAAAG +
Preference number: 1 (lower is better)
Translates to: KSNHLPFQWTQSVLD*KHVNCELQLSVMQK
Trigger: CTTTTGCATGACTGATAGCTGTAACTCACAGTTAACATGCTTTCAGTCAAGTACAGATTGTGTCCACTGGAAAGGTAAATGATTGCTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
3UTR GCA 90 bp GCTAGAGGAAAGGATGGTGGGTGGTATCAATATCAATCTTTACTATaGCAAAGTAAATGTCTAAACCAGCCATTCCTTCATATATGTGAT +
Preference number: 1 (lower is better)
Translates to: ARGKDGGWYQYQSLL*QSKCLNQPFLHICD
Trigger: ATCACATATATGAAGGAATGGCTGGTTTAGACATTTACTTTGGCATAGTAAAGATTGATATTGATACCACCCACCATCCTTTCCTCTAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
3UTR TCA 90 bp CCTTTCATTTCACAGAGATATAGCCTAACTAAGATGGGTACAGTTTaGGTTATTTTCAGCTATTATCACAAAGAAACTGATGAGGTAGGT +
Preference number: 1 (lower is better)
Translates to: PFISQRYSLTKMGTV*VIFSYYHKETDEVG
Trigger: ACCTACCTCATCAGTTTCTTTGTGATAATAGCTGAAAATAACTCAAACTGTACCCATCTTAGTTAGGCTATATCTCTGTGAAATGAAAGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
3UTR CCA 90 bp AATCGAAATAACATAATAATACAGGCATCTCTGAATGAGAAAGGCTaGGCATCTAATATAATTTCTGAAAGCCAGGACAGTTACATGATC +
Preference number: 1 (lower is better)
Translates to: NRNNIIIQASLNEKG*ASNIISESQDSYMI
Trigger: GATCATGTAACTGTCCTGGCTTTCAGAAATTATATTAGATGCCCAGCCTTTCTCATTCAGAGATGCCTGTATTATTATGTTATTTCGATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
3UTR-3UTR CCA 90 bp CTTATCCAAAGTTACACAGCTAACTGCAAAAGAGAGGCAAGAGTAGAAGTCAAGCACTACAGGAGGGCCTaGAAGCCAAGGTCTGGTGGC +
Preference number: 2 (lower is better)
Translates to: LIQSYTANCKREARVEVKHYRRA*KPRSGG
Trigger: GCCACCAGACCTTGGCTTCCAGGCCCTCCTGTAGTG...CTTGACTTCTACTCTTGCCTCTCTTTTGCAGTTAGCTGTGTAACTTTGGATAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
3UTR-3UTR TCA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCGCAGATGGCAATGGATaGCAACATCTTCGAGCCCAA +
Preference number: 2 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFADGNG*QHLRAQ
Trigger: TTGGGCTCGAAGATGTTGTCATCCATTGCCATCTGC...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
3UTR-3UTR CCA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCGAAGCCAAGGTCTGGTaGCTTTGGCAAGATCACATC +
Preference number: 2 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFEAKVW*LWQDHI
Trigger: GATGTGATCTTGCCAAAGCCACCAGACCTTGGCTTC...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
3UTR-3UTR CCA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCACAGTCTTAGCTACTTaGGAGGCTGAAGCTGGAGGA +
Preference number: 2 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFTVLAT*EAEAGG
Trigger: TCCTCCAGCTTCAGCCTCCCAAGTAGCTAAGACTGT...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
3UTR-3UTR CCA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCAAAACTAGCTGGATGTaGTGGCACGCACCTGTAGTC +
Preference number: 2 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFKTSWM*WHAPVV
Trigger: GACTACAGGTGCGTGCCACCACATCCAGCTAGTTTT...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
3UTR-3UTR CCA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTACACTACAGGAGGGCCTaGAAGCCAAGGTCTGGTGGC +
Preference number: 2 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLHYRRA*KPRSGG
Trigger: GCCACCAGACCTTGGCTTCCAGGCCCTCCTGTAGTG...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
3UTR-3UTR CCA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCGTACAGCCCAGAATTTaGCATCAGGTGCAGAACAAC +
Preference number: 2 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFVQPRI*HQVQNN
Trigger: GTTGTTCTGCACCTGATGCCAAATTCTGGGCTGTAC...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
3UTR-3UTR TCA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCACTAATTGTCGGTTATaGGGGAATTCAGACCTGCCT +
Preference number: 2 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFTNCRL*GNSDLP
Trigger: AGGCAGGTCTGAATTCCCTCATAACCGACAATTAGT...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
3UTR-3UTR TCA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCTTGAAAAACTGTGTATaGATCCCTGTGCCAGCTGAG +
Preference number: 2 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFLKNCV*IPVPAE
Trigger: CTCAGCTGGCACAGGGATTCATACACAGTTTTTCAA...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
3UTR-3UTR TCA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCTTGAGGTCAGGAGTTTaGGACCAACATGGCAAAACT +
Preference number: 2 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFLRSGV*DQHGKT
Trigger: AGTTTTGCCATGTTGGTCTCAAACTCCTGACCTCAA...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
3UTR-3UTR GCA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCATTGGGCAAGGCAAGTaGAGACAATCAACTCACTAC +
Preference number: 2 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFIGQGK*RQSTHY
Trigger: GTAGTGAGTTGATTGTCTGCACTTGCCTTGCCCAAT...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
3UTR-3UTR GCA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCAGTTTCAAGCCAGGCTaGAGATTAGAATCACCTGGA +
Preference number: 2 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFSFKPG*RLESPG
Trigger: TCCAGGTGATTCTAATCTGCAGCCTGGCTTGAAACT...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
3UTR-3UTR CCA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCCTGAAAATAAGGGTGTaGGGCAAAAGCTGTAGCCTA +
Preference number: 2 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFLKIRV*GKSCSL
Trigger: TAGGCTACAGCTTTTGCCCCACACCCTTATTTTCAG...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
3UTR-3UTR CCA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCAATACAAAAACTAGCTaGATGTGGTGGCACGCACCT +
Preference number: 2 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFNTKTS*MWWHAP
Trigger: AGGTGCGTGCCACCACATCCAGCTAGTTTTTGTATT...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
3UTR CAA 90 bp CTAGGGGATAGAAGGCAGGTAAGGAAGTTTTGGAGAATGCAGCATTaGAGGAATAGGTCACATGAAGAGGGTATCATGAGCATATTGCCT +
Preference number: 2 (lower is better)
Translates to: LGDRRQVRKFWRMQH*RNRSHEEGIMSILP
Trigger: AGGCAATATGCTCATGATACCCTCTTCATGTGACCTATTCCTCAAATGCTGCATTCTCCAAAACTTCCTTACCTGCCTTCTATCCCCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
3UTR-3UTR TCA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCCTCAGAGAAATAAAATaGCCAGCCCAGTTGACATCA +
Preference number: 2 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFLREIK*PAQLTS
Trigger: TGATGTCAACTGGGCTGGTCATTTTATTTCTCTGAG...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
3UTR-3UTR TCA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCCCTTACAATATCCAGTaGGGGAGGCTAAAACCAAAA +
Preference number: 2 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFPYNIQ*GRLKPK
Trigger: TTTTGGTTTTAGCCTCCCTCACTGGATATTGTAAGG...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
3UTR CAA 90 bp ATCAGAGAATGTGAAATTCCCAGTTCATGCTCTAACCAAGTGCACTaGCCCTGTACATCCCAACAACAGCAACTTTTCCACTCATTTGGA +
Preference number: 2 (lower is better)
Translates to: IRECEIPSSCSNQVH*PCTSQQQQLFHSFG
Trigger: TCCAAATGAGTGGAAAAGTTGCTGTTGTTGGGATGTACAGGGCAAGTGCACTTGGTTAGAGCATGAACTGGGAATTTCACATTCTCTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
3UTR-3UTR TCA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCCAATCTGTACTTGACTaGAAGCATGTTAACTGTGAG +
Preference number: 2 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFQSVLD*KHVNCE
Trigger: CTCACAGTTAACATGCTTTCAGTCAAGTACAGATTG...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
3UTR-3UTR TCA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCAACTGCTGCCCAAACTaGATACTGTTGTTTAAAACC +
Preference number: 2 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFNCCPN*ILLFKT
Trigger: GGTTTTAAACAACAGTATTCAGTTTGGGCAGCAGTT...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
3UTR-3UTR GCA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCGTTTTAGTTCTCTCATaGTGTTTGCAGGAGAGATTC +
Preference number: 2 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFVLVLS*CLQERF
Trigger: GAATCTCTCCTGCAAACAGCATGAGAGAACTAAAAC...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
3UTR-3UTR CCA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCCATTTACCTTTCCAGTaGACACAATCTGTACTTGAC +
Preference number: 2 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFHLPFQ*TQSVLD
Trigger: GTCAAGTACAGATTGTGTCCACTGGAAAGGTAAATG...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
3UTR-3UTR CCA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTACTGGAAGCCAAGGTCTaGTGGCTTTGGCAAGATCAC +
Preference number: 2 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLLEAKV*WLWQDH
Trigger: GTGATCTTGCCAAAGCCACCAGACCTTGGCTTCCAG...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
3UTR-3UTR CCA 90 bp CTTATCCAAAGTTACACAGCTAACTGCAAAAGAGAGGCAAGAGTAGAAGTCAAGAAAGCTGTAGCCTACTaGCTATTGGGCAAGGCAAGT +
Preference number: 2 (lower is better)
Translates to: LIQSYTANCKREARVEVKKAVAY*LLGKAS
Trigger: ACTTGCCTTGCCCAATAGCCAGTAGGCTACAGCTTT...CTTGACTTCTACTCTTGCCTCTCTTTTGCAGTTAGCTGTGTAACTTTGGATAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
3UTR-3UTR CCA 90 bp CTTATCCAAAGTTACACAGCTAACTGCAAAAGAGAGGCAAGAGTAGAAGTCAAGGTCTACAAGGATGGCTaGTTCTGGGTAGACTTCAAC +
Preference number: 2 (lower is better)
Translates to: LIQSYTANCKREARVEVKVYKDG*FWVDFN
Trigger: GTTGAAGTCTACCCAGAACCAGCCATCCTTGTAGAC...CTTGACTTCTACTCTTGCCTCTCTTTTGCAGTTAGCTGTGTAACTTTGGATAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
3UTR-3UTR TCA 90 bp CTTATCCAAAGTTACACAGCTAACTGCAAAAGAGAGGCAAGAGTAGAAGTCAAGACTAATTGTCGGTTATaGGGGAATTCAGACCTGCCT +
Preference number: 2 (lower is better)
Translates to: LIQSYTANCKREARVEVKTNCRL*GNSDLP
Trigger: AGGCAGGTCTGAATTCCCTCATAACCGACAATTAGT...CTTGACTTCTACTCTTGCCTCTCTTTTGCAGTTAGCTGTGTAACTTTGGATAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
3UTR-3UTR TCA 90 bp CTTATCCAAAGTTACACAGCTAACTGCAAAAGAGAGGCAAGAGTAGAAGTCAAGAAAAACCCAGGAGACTaGTTACAATCAGACGGAAGG +
Preference number: 2 (lower is better)
Translates to: LIQSYTANCKREARVEVKKNPGD*LQSDGR
Trigger: CCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTTT...CTTGACTTCTACTCTTGCCTCTCTTTTGCAGTTAGCTGTGTAACTTTGGATAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
3UTR-3UTR GCA 90 bp CTTATCCAAAGTTACACAGCTAACTGCAAAAGAGAGGCAAGAGTAGAAGTCAAGATTGGGCAAGGCAAGTaGAGACAATCAACTCACTAC +
Preference number: 2 (lower is better)
Translates to: LIQSYTANCKREARVEVKIGQGK*RQSTHY
Trigger: GTAGTGAGTTGATTGTCTGCACTTGCCTTGCCCAAT...CTTGACTTCTACTCTTGCCTCTCTTTTGCAGTTAGCTGTGTAACTTTGGATAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
3UTR-3UTR GCA 90 bp CTTATCCAAAGTTACACAGCTAACTGCAAAAGAGAGGCAAGAGTAGAAGTCAAGAGTTTCAAGCCAGGCTaGAGATTAGAATCACCTGGA +
Preference number: 2 (lower is better)
Translates to: LIQSYTANCKREARVEVKSFKPG*RLESPG
Trigger: TCCAGGTGATTCTAATCTGCAGCCTGGCTTGAAACT...CTTGACTTCTACTCTTGCCTCTCTTTTGCAGTTAGCTGTGTAACTTTGGATAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
3UTR-3UTR CCA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTAGAAGCCAAGGTCTGGTaGCTTTGGCAAGATCACATC +
Preference number: 2 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLEAKVW*LWQDHI
Trigger: GATGTGATCTTGCCAAAGCCACCAGACCTTGGCTTC...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
3UTR-3UTR TCA 90 bp CTTATCCAAAGTTACACAGCTAACTGCAAAAGAGAGGCAAGAGTAGAAGTCAAGGTGTTTTGGATGCCTTaGTGTTCCAAGTTTGATGCA +
Preference number: 2 (lower is better)
Translates to: LIQSYTANCKREARVEVKVFWMP*CSKFDA
Trigger: TGCATCAAACTTGGAACATCAAGGCATCCAAAACAC...CTTGACTTCTACTCTTGCCTCTCTTTTGCAGTTAGCTGTGTAACTTTGGATAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
3UTR-3UTR TCA 90 bp CTTATCCAAAGTTACACAGCTAACTGCAAAAGAGAGGCAAGAGTAGAAGTCAAGGCCCAGTTGACATCATaGGTCTTAAAATTCCAATCC +
Preference number: 2 (lower is better)
Translates to: LIQSYTANCKREARVEVKAQLTS*VLKFQS
Trigger: GGATTGGAATTTTAAGACTCATGATGTCAACTGGGC...CTTGACTTCTACTCTTGCCTCTCTTTTGCAGTTAGCTGTGTAACTTTGGATAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
3UTR-3UTR CCA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTAAAAGCTGTAGCCTACTaGCTATTGGGCAAGGCAAGT +
Preference number: 2 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLKAVAY*LLGKAS
Trigger: ACTTGCCTTGCCCAATAGCCAGTAGGCTACAGCTTT...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
3UTR-3UTR CCA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCTCAAAGTATGATTCTTaGATTACCTCCGTAAGAATC +
Preference number: 2 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFSKYDS*ITSVRI
Trigger: GATTCTTACGGAGGTAATCCAAGAATCATACTTTGA...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
3UTR CAA 90 bp CTATCTTCATTTACAAACAAGGGAACTGAGGCTCGGAGAGTTAAATaGTTAAAGGTCATAAACTATAATAGCATAAGGCAGAGCCAGGCC +
Preference number: 2 (lower is better)
Translates to: LSSFTNKGTEARRVK*LKVINYNSIRQSQA
Trigger: GGCCTGGCTCTGCCTTATGCTATTATAGTTTATGACCTTTAACAATTTAACTCTCCGAGCCTCAGTTCCCTTGTTTGTAAATGAAGATAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
3UTR CAA 90 bp CAGCATTTGAGGAATAGGTCACATGAAGAGGGTATCATGAGCATATaGCCTAGGAAGAAGTGTACCAAGCAATTATTGAGAGATCAAAGT +
Preference number: 2 (lower is better)
Translates to: QHLRNRSHEEGIMSI*PRKKCTKQLLRDQS
Trigger: ACTTTGATCTCTCAATAATTGCTTGGTACACTTCTTCCTAGGCAATATGCTCATGATACCCTCTTCATGTGACCTATTCCTCAAATGCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
3UTR-3UTR TCA 90 bp CTTATCCAAAGTTACACAGCTAACTGCAAAAGAGAGGCAAGAGTAGAAGTCAAGTTACTATCAGAAAACTaGCTTTGCTGCCTGATGAGA +
Preference number: 2 (lower is better)
Translates to: LIQSYTANCKREARVEVKLLSEN*LCCLMR
Trigger: TCTCATCAGGCAGCAAAGTCAGTTTTCTGATAGTAA...CTTGACTTCTACTCTTGCCTCTCTTTTGCAGTTAGCTGTGTAACTTTGGATAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
3UTR-3UTR TCA 90 bp CTTATCCAAAGTTACACAGCTAACTGCAAAAGAGAGGCAAGAGTAGAAGTCAAGAACTGCTGCCCAAACTaGATACTGTTGTTTAAAACC +
Preference number: 2 (lower is better)
Translates to: LIQSYTANCKREARVEVKNCCPN*ILLFKT
Trigger: GGTTTTAAACAACAGTATTCAGTTTGGGCAGCAGTT...CTTGACTTCTACTCTTGCCTCTCTTTTGCAGTTAGCTGTGTAACTTTGGATAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
3UTR-3UTR TCA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTATTGAAAAACTGTGTATaGATCCCTGTGCCAGCTGAG +
Preference number: 2 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLLKNCV*IPVPAE
Trigger: CTCAGCTGGCACAGGGATTCATACACAGTTTTTCAA...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
3UTR-3UTR CCA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTACTGAAAATAAGGGTGTaGGGCAAAAGCTGTAGCCTA +
Preference number: 2 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLLKIRV*GKSCSL
Trigger: TAGGCTACAGCTTTTGCCCCACACCCTTATTTTCAG...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
3UTR-3UTR CCA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTAAATACAAAAACTAGCTaGATGTGGTGGCACGCACCT +
Preference number: 2 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLNTKTS*MWWHAP
Trigger: AGGTGCGTGCCACCACATCCAGCTAGTTTTTGTATT...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
3UTR-3UTR TCA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTAGTGTTTTGGATGCCTTaGTGTTCCAAGTTTGATGCA +
Preference number: 2 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLVFWMP*CSKFDA
Trigger: TGCATCAAACTTGGAACATCAAGGCATCCAAAACAC...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
3UTR-3UTR TCA 90 bp CTTATCCAAAGTTACACAGCTAACTGCAAAAGAGAGGCAAGAGTAGAAGTCAAGCAATTCTTATTTGTATaGGAGGAAGGTGTTAGGCAT +
Preference number: 2 (lower is better)
Translates to: LIQSYTANCKREARVEVKQFLFV*EEGVRH
Trigger: ATGCCTAACACCTTCCTCTCATACAAATAAGAATTG...CTTGACTTCTACTCTTGCCTCTCTTTTGCAGTTAGCTGTGTAACTTTGGATAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
3UTR-3UTR TCA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTATGTTCATGTGATATATaGTGCCGACAGATCATCAGG +
Preference number: 2 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLCSCDI*CRQIIR
Trigger: CCTGATGATCTGTCGGCATCATATATCACATGAACA...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
3UTR-3UTR TCA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTACTCAGAGAAATAAAATaGCCAGCCCAGTTGACATCA +
Preference number: 2 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLLREIK*PAQLTS
Trigger: TGATGTCAACTGGGCTGGTCATTTTATTTCTCTGAG...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
3UTR-3UTR TCA 90 bp CTTATCCAAAGTTACACAGCTAACTGCAAAAGAGAGGCAAGAGTAGAAGTCAAGACGACACAAAAGCATTaGAAAGAATCACAAGTTCCT +
Preference number: 2 (lower is better)
Translates to: LIQSYTANCKREARVEVKTTQKH*KESQVP
Trigger: AGGAACTTGTGATTCTTTTCAATGCTTTTGTGTCGT...CTTGACTTCTACTCTTGCCTCTCTTTTGCAGTTAGCTGTGTAACTTTGGATAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
3UTR-3UTR TCA 90 bp CTTATCCAAAGTTACACAGCTAACTGCAAAAGAGAGGCAAGAGTAGAAGTCAAGAGAAGACTTGGATCCTaGGAGAAAATTGTAATCCTA +
Preference number: 2 (lower is better)
Translates to: LIQSYTANCKREARVEVKRRLGS*EKIVIL
Trigger: TAGGATTACAATTTTCTCTCAGGATCCAAGTCTTCT...CTTGACTTCTACTCTTGCCTCTCTTTTGCAGTTAGCTGTGTAACTTTGGATAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
3UTR-3UTR TCA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTAGGTTATAATGAACTATaGTTATGCCACTGCTCTCCA +
Preference number: 2 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLGYNEL*LCHCSP
Trigger: TGGAGAGCAGTGGCATAATCATAGTTCATTATAACC...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
3UTR-3UTR GCA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTAGTTTTAGTTCTCTCATaGTGTTTGCAGGAGAGATTC +
Preference number: 2 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLVLVLS*CLQERF
Trigger: GAATCTCTCCTGCAAACAGCATGAGAGAACTAAAAC...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
3UTR-3UTR CCA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTACATTTACCTTTCCAGTaGACACAATCTGTACTTGAC +
Preference number: 2 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLHLPFQ*TQSVLD
Trigger: GTCAAGTACAGATTGTGTCCACTGGAAAGGTAAATG...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
3UTR-3UTR CCA 90 bp CTTATCCAAAGTTACACAGCTAACTGCAAAAGAGAGGCAAGAGTAGAAGTCAAGTCAAAGTATGATTCTTaGATTACCTCCGTAAGAATC +
Preference number: 2 (lower is better)
Translates to: LIQSYTANCKREARVEVKSKYDS*ITSVRI
Trigger: GATTCTTACGGAGGTAATCCAAGAATCATACTTTGA...CTTGACTTCTACTCTTGCCTCTCTTTTGCAGTTAGCTGTGTAACTTTGGATAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
3UTR-3UTR CCA 90 bp CTTATCCAAAGTTACACAGCTAACTGCAAAAGAGAGGCAAGAGTAGAAGTCAAGGTACCAAATGAACACTaGTCTAATTGCCTATTTTGT +
Preference number: 2 (lower is better)
Translates to: LIQSYTANCKREARVEVKVPNEH*SNCLFC
Trigger: ACAAAATAGGCAATTAGACCAGTGTTCATTTGGTAC...CTTGACTTCTACTCTTGCCTCTCTTTTGCAGTTAGCTGTGTAACTTTGGATAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
3UTR-3UTR TCA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTACAATTCTTATTTGTATaGGAGGAAGGTGTTAGGCAT +
Preference number: 2 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLQFLFV*EEGVRH
Trigger: ATGCCTAACACCTTCCTCTCATACAAATAAGAATTG...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
3UTR-3UTR TCA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTAGAAAGAAAGTATACATaGATTCAACACACGTCAAGG +
Preference number: 2 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLERKYT*IQHTSR
Trigger: CCTTGACGTGTGTTGAATTCATGTATACTTTCTTTC...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
3UTR CAA 90 bp ACTGTCTATACTTGGCCCACTTGTAAAAGAAAACCAATTAACATTTaGGCAGTTGATAATATAATGCAGATGGCAATGGATGACAACATC +
Preference number: 2 (lower is better)
Translates to: TVYTWPTCKRKPINI*AVDNIMQMAMDDNI
Trigger: GATGTTGTCATCCATTGCCATCTGCATTATATTATCAACTGCCAAAATGTTAATTGGTTTTCTTTTACAAGTGGGCCAAGTATAGACAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
3UTR-3UTR GCA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTATCCGTAAGAATCACCTaGGGTATTTTTATAACTACA +
Preference number: 2 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLSVRIT*GIFITT
Trigger: TGTAGTTATAAAAATACCGCAGGTGATTCTTACGGA...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
3UTR CCA 72 bp GGCAAGTGCAGACAATCAACTCACTACAGGAGGGCCTaGAAGCCAAGGTCTGGTGGCTTTGGCAAGATCACA +
Preference number: 3 (lower is better)
Translates to: GKCRQSTHYRRA*KPRSGGFGKIT
Trigger: TGTGATCTTGCCAAAGCCACCAGACCTTGGCTTCCAGGCCCTCCTGTAGTGAGTTGATTGTCTGCACTTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
3UTR GCA 72 bp AAAAGCTGTAGCCTACTGGCTATTGGGCAAGGCAAGTaGAGACAATCAACTCACTACAGGAGGGCCTGGAAG +
Preference number: 3 (lower is better)
Translates to: KSCSLLAIGQGK*RQSTHYRRAWK
Trigger: CTTCCAGGCCCTCCTGTAGTGAGTTGATTGTCTGCACTTGCCTTGCCCAATAGCCAGTAGGCTACAGCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
3UTR-3UTR CAA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCGTAGCCTACTGGCTATaGGGCAAGGCAAGTGCAGAC +
Preference number: 3 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFVAYWL*GKASAD
Trigger: GTCTGCACTTGCCTTGCCCAATAGCCAGTAGGCTAC...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
3UTR-3UTR CAA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCTCAGACCTGCCTGCTTaGAGCATTAACTCCAGCTCC +
Preference number: 3 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFSDLPA*SINSSS
Trigger: GGAGCTGGAGTTAATGCTCAAAGCAGGCAGGTCTGA...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
3UTR-3UTR CAA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCAAGCTGGAGGACTGCTaGAGCCTAGGAGTTCAAGGT +
Preference number: 3 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFKLEDC*SLGVQG
Trigger: ACCTTGAACTCCTAGGCTCAAGCAGTCCTCCAGCTT...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
3UTR-3UTR CAA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCAGACAGAAGAATCACTaGAACCTGGGAGGTGGAGGT +
Preference number: 3 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFRQKNH*NLGGGG
Trigger: ACCTCCACCTCCCAGGTTCAAGTGATTCTTCTGTCT...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
3UTR-3UTR CAA 90 bp CTTATCCAAAGTTACACAGCTAACTGCAAAAGAGAGGCAAGAGTAGAAGTCAAGAAGCTGGAGGACTGCTaGAGCCTAGGAGTTCAAGGT +
Preference number: 3 (lower is better)
Translates to: LIQSYTANCKREARVEVKKLEDC*SLGVQG
Trigger: ACCTTGAACTCCTAGGCTCAAGCAGTCCTCCAGCTT...CTTGACTTCTACTCTTGCCTCTCTTTTGCAGTTAGCTGTGTAACTTTGGATAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
3UTR GCA 72 bp GTGAAATTCCCAGTTCATGCTCTAACCAAGTGCACTTaGCCTGTACATCCCAACAACAGCAACTTTTCCACT +
Preference number: 3 (lower is better)
Translates to: VKFPVHALTKCT*PVHPNNSNFST
Trigger: AGTGGAAAAGTTGCTGTTGTTGGGATGTACAGGGCAAGTGCACTTGGTTAGAGCATGAACTGGGAATTTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
3UTR-3UTR CAA 90 bp CTTATCCAAAGTTACACAGCTAACTGCAAAAGAGAGGCAAGAGTAGAAGTCAAGAGACAGAAGAATCACTaGAACCTGGGAGGTGGAGGT +
Preference number: 3 (lower is better)
Translates to: LIQSYTANCKREARVEVKRQKNH*NLGGGG
Trigger: ACCTCCACCTCCCAGGTTCAAGTGATTCTTCTGTCT...CTTGACTTCTACTCTTGCCTCTCTTTTGCAGTTAGCTGTGTAACTTTGGATAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
3UTR-3UTR CAA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCGGACACAATCTGTACTaGACTGAAAGCATGTTAACT +
Preference number: 3 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFGHNLY*TESMLT
Trigger: AGTTAACATGCTTTCAGTCAAGTACAGATTGTGTCC...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
3UTR-3UTR CAA 90 bp CTTATCCAAAGTTACACAGCTAACTGCAAAAGAGAGGCAAGAGTAGAAGTCAAGAGTACAGCCCAGAATTaGGCATCAGGTGCAGAACAA +
Preference number: 3 (lower is better)
Translates to: LIQSYTANCKREARVEVKSTAQN*ASGAEQ
Trigger: TTGTTCTGCACCTGATGCCAAATTCTGGGCTGTACT...CTTGACTTCTACTCTTGCCTCTCTTTTGCAGTTAGCTGTGTAACTTTGGATAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
3UTR-3UTR CAA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTATCAGACCTGCCTGCTTaGAGCATTAACTCCAGCTCC +
Preference number: 3 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLSDLPA*SINSSS
Trigger: GGAGCTGGAGTTAATGCTCAAAGCAGGCAGGTCTGA...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
3UTR-3UTR CAA 90 bp CTTATCCAAAGTTACACAGCTAACTGCAAAAGAGAGGCAAGAGTAGAAGTCAAGGTTCTCTCATGCTGTTaGCAGGAGAGATTCTCAGAC +
Preference number: 3 (lower is better)
Translates to: LIQSYTANCKREARVEVKVLSCC*QERFSD
Trigger: GTCTGAGAATCTCTCCTGCAAACAGCATGAGAGAAC...CTTGACTTCTACTCTTGCCTCTCTTTTGCAGTTAGCTGTGTAACTTTGGATAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
3UTR-3UTR CAA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCAGAATTCTTAGTGTTTaGGATGCCTTGATGTTCCAA +
Preference number: 3 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFRILSV*DALMFQ
Trigger: TTGGAACATCAAGGCATCCAAAACACTAAGAATTCT...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
3UTR-3UTR CAA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCTCAACACCTAATTTCTaGGCAGTTTGTTTTAAAGGG +
Preference number: 3 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFSTPNF*AVCFKG
Trigger: CCCTTTAAAACAAACTGCCAAGAAATTAGGTGTTGA...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
3UTR-3UTR CAA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCATCAGAAAACTGACTTaGCTGCCTGATGAGAATATT +
Preference number: 3 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFIRKLT*LPDENI
Trigger: AATATTCTCATCAGGCAGCAAAGTCAGTTTTCTGAT...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
3UTR-3UTR CAA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTAAGTACAGCCCAGAATTaGGCATCAGGTGCAGAACAA +
Preference number: 3 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLSTAQN*ASGAEQ
Trigger: TTGTTCTGCACCTGATGCCAAATTCTGGGCTGTACT...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
3UTR-3UTR CAA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTAGTTCTCTCATGCTGTTaGCAGGAGAGATTCTCAGAC +
Preference number: 3 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLVLSCC*QERFSD
Trigger: GTCTGAGAATCTCTCCTGCAAACAGCATGAGAGAAC...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
3UTR TCA 72 bp CATTTACCTTTCCAGTGGACACAATCTGTACTTGACTaGAAGCATGTTAACTGTGAGTTACAGCTATCAGTC +
Preference number: 3 (lower is better)
Translates to: HLPFQWTQSVLD*KHVNCELQLSV
Trigger: GACTGATAGCTGTAACTCACAGTTAACATGCTTTCAGTCAAGTACAGATTGTGTCCACTGGAAAGGTAAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
3UTR TCA 72 bp TGGCTTTCAGAGAAAATGTTTACTAATTGTCGGTTATaGGGGAATTCAGACCTGCCTGCTTTGAGCATTAAC +
Preference number: 3 (lower is better)
Translates to: WLSEKMFTNCRL*GNSDLPALSIN
Trigger: GTTAATGCTCAAAGCAGGCAGGTCTGAATTCCCTCATAACCGACAATTAGTAAACATTTTCTCTGAAAGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
3UTR TCA 72 bp ACGCTACCTAAACTAATTCTCTTGTTCCCTAGAGAATaGGAAAAATGGAGGCACCACGAGATAAAATGCCTT +
Preference number: 3 (lower is better)
Translates to: TLPKLILLFPRE*EKWRHHEIKCL
Trigger: AAGGCATTTTATCTCGTGGTGCCTCCATTTTTCTCATTCTCTAGGGAACAAGAGAATTAGTTTAGGTAGCGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
3UTR-3UTR CAA 90 bp CTTATCCAAAGTTACACAGCTAACTGCAAAAGAGAGGCAAGAGTAGAAGTCAAGAGAATTCTTAGTGTTTaGGATGCCTTGATGTTCCAA +
Preference number: 3 (lower is better)
Translates to: LIQSYTANCKREARVEVKRILSV*DALMFQ
Trigger: TTGGAACATCAAGGCATCCAAAACACTAAGAATTCT...CTTGACTTCTACTCTTGCCTCTCTTTTGCAGTTAGCTGTGTAACTTTGGATAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
3UTR-3UTR CAA 90 bp CTTATCCAAAGTTACACAGCTAACTGCAAAAGAGAGGCAAGAGTAGAAGTCAAGGCTACCAATTCTTATTaGTATGAGAGGAAGGTGTTA +
Preference number: 3 (lower is better)
Translates to: LIQSYTANCKREARVEVKATNSY*YERKVL
Trigger: TAACACCTTCCTCTCATACAAATAAGAATTGGTAGC...CTTGACTTCTACTCTTGCCTCTCTTTTGCAGTTAGCTGTGTAACTTTGGATAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
3UTR-3UTR CAA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTAGGACACAATCTGTACTaGACTGAAAGCATGTTAACT +
Preference number: 3 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLGHNLY*TESMLT
Trigger: AGTTAACATGCTTTCAGTCAAGTACAGATTGTGTCC...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
3UTR TCA 72 bp ACACCCAGATTTGAACCAGTGTTCAAAAGACTGATATaGGCTAATGTAGACAATCAGAGCAAACACAATGAT +
Preference number: 3 (lower is better)
Translates to: TPRFEPVFKRLI*ANVDNQSKHND
Trigger: ATCATTGTGTTTGCTCTGATTGTCTACATTAGCTCATATCAGTCTTTTGAACACTGGTTCAAATCTGGGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
3UTR GCA 72 bp AAGGATGGTGGGTGGTATCAATATCAATCTTTACTATaGCAAAGTAAATGTCTAAACCAGCCATTCCTTCAT +
Preference number: 3 (lower is better)
Translates to: KDGGWYQYQSLL*QSKCLNQPFLH
Trigger: ATGAAGGAATGGCTGGTTTAGACATTTACTTTGGCATAGTAAAGATTGATATTGATACCACCCACCATCCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
3UTR-3UTR CAA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTAGCTACCAATTCTTATTaGTATGAGAGGAAGGTGTTA +
Preference number: 3 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLATNSY*YERKVL
Trigger: TAACACCTTCCTCTCATACAAATAAGAATTGGTAGC...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
3UTR-3UTR CAA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTATCAACACCTAATTTCTaGGCAGTTTGTTTTAAAGGG +
Preference number: 3 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLSTPNF*AVCFKG
Trigger: CCCTTTAAAACAAACTGCCAAGAAATTAGGTGTTGA...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
3UTR-3UTR CAA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTAATCAGAAAACTGACTTaGCTGCCTGATGAGAATATT +
Preference number: 3 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLIRKLT*LPDENI
Trigger: AATATTCTCATCAGGCAGCAAAGTCAGTTTTCTGAT...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR TCA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCACGGTCTTGATCTCCTaGCCTCGTGATCCGCCCGCC +
Preference number: 4 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFTVLIS*PRDPPA
Trigger: GGCGGGCGGATCACGAGGTCAGGAGATCAAGACCGT...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR CCA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCCACTACAGGAGGGCCTaGAAGCCAAGGTCTGGTGGC +
Preference number: 4 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFHYRRA*KPRSGG
Trigger: GCCACCAGACCTTGGCTTCCAGGCCCTCCTGTAGTG...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR GCA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCTCCGGGGATGCCCCATaGACTGGCGTGAAACAGCAA +
Preference number: 4 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFSGDAP*TGVKQQ
Trigger: TTGCTGTTTCACGCCAGTGCATGGGGCATCCCCGGA...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR TCA 90 bp CTTATCCAAAGTTACACAGCTAACTGCAAAAGAGAGGCAAGAGTAGAAGTCAAGACGGTCTTGATCTCCTaGCCTCGTGATCCGCCCGCC +
Preference number: 4 (lower is better)
Translates to: LIQSYTANCKREARVEVKTVLIS*PRDPPA
Trigger: GGCGGGCGGATCACGAGGTCAGGAGATCAAGACCGT...CTTGACTTCTACTCTTGCCTCTCTTTTGCAGTTAGCTGTGTAACTTTGGATAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR GCA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCTTAGAGTTCCGGGGATaGCCCATGCACTGGCGTGAA +
Preference number: 4 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFLEFRG*PMHWRE
Trigger: TTCACGCCAGTGCATGGGGCATCCCCGGAACTCTAA...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR CCA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCTCTCTGCACTGCCACTaGGGCTCCTTCAGTTGGTTC +
Preference number: 4 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFSLHCH*GSFSWF
Trigger: GAACCAACTGAAGGAGCCCCAGTGGCAGTGCAGAGA...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR TCA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCCGTGACATGCTGCCATaGGGTAGTCTCTCCTCCATT +
Preference number: 4 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFRDMLP*GSLSSI
Trigger: AATGGAGGAGAGACTACCTCATGGCAGCATGTCACG...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR GCA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCTCAGGTCTTGAGAAATaGTATCCTCAGACCCCGGCG +
Preference number: 4 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFSGLEK*YPQTPA
Trigger: CGCCGGGGTCTGAGGATAGCATTTCTCAAGACCTGA...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000240093.8
CDS-3UTR GCA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCATAGTCTCTCTGCACTaGCACTGGGGCTCCTTCAGT +
Preference number: 4 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFIVSLH*HWGSFS
Trigger: ACTGAAGGAGCCCCAGTGGCAGTGCAGAGAGACTAT...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR GCA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCCCATTCCTCTGTAACTaGAGGGCGTGTACCTGCCAT +
Preference number: 4 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFPFLCN*RACTCH
Trigger: ATGGCAGGTACACGCCCTGCAGTTACAGAGGAATGG...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR GCA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCGAGGAGCGATCCACATaGCGAGATGACCGCGATAAT +
Preference number: 4 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFEERST*RDDRDN
Trigger: ATTATCGCGGTCATCTCGGCATGTGGATCGCTCCTC...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR CCA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCGGATGCCCCATGCACTaGCGTGAAACAGCAATGCTT +
Preference number: 4 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFGCPMH*RETAML
Trigger: AAGCATTGCTGTTTCACGCCAGTGCATGGGGCATCC...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
3UTR CAA 72 bp ACTACAGGAGGGCCTGGAAGCCAAGGTCTGGTGGCTTaGGCAAGATCACATCTCACTGTAGAAAAATACAAC +
Preference number: 4 (lower is better)
Translates to: TTGGPGSQGLVA*ARSHLTVEKYN
Trigger: GTTGTATTTTTCTACAGTGAGATGTGATCTTGCCAAAGCCACCAGACCTTGGCTTCCAGGCCCTCCTGTAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR TCA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCCACCTATATGCCCCATaGACACAGTCAAGGGCCAAA +
Preference number: 4 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFHLYAP*TQSRAK
Trigger: TTTGGCCCTTGACTGTGTTCATGGGGCATATAGGTG...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR TCA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCGATGCTGCTATGTCGTaGCTGTTCATTGAGCCGATG +
Preference number: 4 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFDAAMS*LFIEPM
Trigger: CATCGGCTCAATGAACAGTCACGACATAGCAGCATC...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR TCA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCCTAAGAGAGAACAGCTaGTCTACAGGAGGAGCGATC +
Preference number: 4 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFLRENS*STGGAI
Trigger: GATCGCTCCTCCTGTAGATCAGCTGTTCTCTCTTAG...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR TCA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCAGGATCAGCAGGCCCTaGCTTCATAAGGCCCATAAA +
Preference number: 4 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFRISRP*LHKAHK
Trigger: TTTATGGGCCTTATGAAGTCAGGGCCTGCTGATCCT...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR GCA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCGTGGAATGGCTCCATTaGCAAAGCTGCTGTCTGTTG +
Preference number: 4 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFVEWLH*QSCCLL
Trigger: CAACAGACAGCAGCTTTGGCAATGGAGCCATTCCAC...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR GCA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCACGTTGTTTCCCAGATaGCCCGGTAAGCTTGCTCAT +
Preference number: 4 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFTLFPR*PGKLAH
Trigger: ATGAGCAAGCTTACCGGGGCATCTGGGAAACAACGT...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR GCA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCCATGCTCTAACCAAGTaGACTTGCCCTGTACATCCC +
Preference number: 4 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFHALTK*TCPVHP
Trigger: GGGATGTACAGGGCAAGTGCACTTGGTTAGAGCATG...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR TCA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCCACCAAACATCTCCATaGGCTTCGAACACTCACTGT +
Preference number: 4 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFHQTSP*ASNTHC
Trigger: ACAGTGAGTGTTCGAAGCTCATGGAGATGTTTGGTG...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR TCA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTAGTACCTGCCATCACGTaGTCTGTGGAGGCTGCCGTG +
Preference number: 4 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLVPAIT*SVEAAV
Trigger: CACGGCAGCCTCCACAGATCACGTGATGGCAGGTAC...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR TCA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCCTACTATGCCTGGAGTaGTCTGTTAGTCGTGACATG +
Preference number: 4 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFLLCLE*SVSRDM
Trigger: CATGTCACGACTAACAGATCACTCCAGGCATAGTAG...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR TCA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCTGTTCATTGAGCCGATaGGAACTACTATGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFCSLSR*ELLCLE
Trigger: CTCCAGGCATAGTAGTTCTCATCGGCTCAATGAACA...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR GCA 90 bp CTTATCCAAAGTTACACAGCTAACTGCAAAAGAGAGGCAAGAGTAGAAGTCAAGGTGATCTGTGGAGGCTaGCGTGGTAGCTGCTCACTT +
Preference number: 4 (lower is better)
Translates to: LIQSYTANCKREARVEVKVICGG*RGSCSL
Trigger: AAGTGAGCAGCTACCACGGCAGCCTCCACAGATCAC...CTTGACTTCTACTCTTGCCTCTCTTTTGCAGTTAGCTGTGTAACTTTGGATAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR GCA 90 bp CTTATCCAAAGTTACACAGCTAACTGCAAAAGAGAGGCAAGAGTAGAAGTCAAGTGCAGGGCGTGTACCTaGCATCACGTGATCTGTGGA +
Preference number: 4 (lower is better)
Translates to: LIQSYTANCKREARVEVKCRACT*HHVICG
Trigger: TCCACAGATCACGTGATGGCAGGTACACGCCCTGCA...CTTGACTTCTACTCTTGCCTCTCTTTTGCAGTTAGCTGTGTAACTTTGGATAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR GCA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCTTAGTCGTGACATGCTaGCATGAGGTAGTCTCTCCT +
Preference number: 4 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFLVVTC*HEVVSP
Trigger: AGGAGAGACTACCTCATGGCAGCATGTCACGACTAA...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR GCA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCCTGTTAGTCGTGACATaGTGCCATGAGGTAGTCTCT +
Preference number: 4 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFLLVVT*CHEVVS
Trigger: AGAGACTACCTCATGGCAGCATGTCACGACTAACAG...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR GCA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTATTCACGCCATTCTCCTaGCTCAGCCTCCCGAGTGGC +
Preference number: 4 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLFTPFS*LSLPSG
Trigger: GCCACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAA...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR CCA 90 bp CTTATCCAAAGTTACACAGCTAACTGCAAAAGAGAGGCAAGAGTAGAAGTCAAGTCTCTGCACTGCCACTaGGGCTCCTTCAGTTGGTTC +
Preference number: 4 (lower is better)
Translates to: LIQSYTANCKREARVEVKSLHCH*GSFSWF
Trigger: GAACCAACTGAAGGAGCCCCAGTGGCAGTGCAGAGA...CTTGACTTCTACTCTTGCCTCTCTTTTGCAGTTAGCTGTGTAACTTTGGATAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR TCA 90 bp CTTATCCAAAGTTACACAGCTAACTGCAAAAGAGAGGCAAGAGTAGAAGTCAAGCCCCATGCACTGGCGTaGAACAGCAATGCTTTCTTC +
Preference number: 4 (lower is better)
Translates to: LIQSYTANCKREARVEVKPHALA*NSNAFF
Trigger: GAAGAAAGCATTGCTGTTTCACGCCAGTGCATGGGG...CTTGACTTCTACTCTTGCCTCTCTTTTGCAGTTAGCTGTGTAACTTTGGATAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR TCA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCCGAGATAAAGAATGCTaGAAACACCGATCCGGATCA +
Preference number: 4 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFRDKEC*KHRSGS
Trigger: TGATCCGGATCGGTGTTTTCAGCATTCTTTATCTCG...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR TCA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCAGGGAATGCCAACTATaGGAGCCATCAGGTATTTCA +
Preference number: 4 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFRECQL*EPSGIS
Trigger: TGAAATACCTGATGGCTCTCATAGTTGGCATTCCCT...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR TCA 90 bp CTTATCCAAAGTTACACAGCTAACTGCAAAAGAGAGGCAAGAGTAGAAGTCAAGTCCCTCAGGAGAGACTaGGCAAAATCAGGTTCCTGG +
Preference number: 4 (lower is better)
Translates to: LIQSYTANCKREARVEVKSLRRD*AKSGSW
Trigger: CCAGGAACCTGATTTTGCTCAGTCTCTCCTGAGGGA...CTTGACTTCTACTCTTGCCTCTCTTTTGCAGTTAGCTGTGTAACTTTGGATAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR TCA 90 bp CTTATCCAAAGTTACACAGCTAACTGCAAAAGAGAGGCAAGAGTAGAAGTCAAGTCCACCATAGCCAGCTaGGTTGAAGAAGCATGGGTG +
Preference number: 4 (lower is better)
Translates to: LIQSYTANCKREARVEVKSTIAS*VEEAWV
Trigger: CACCCATGCTTCTTCAACTCAGCTGGCTATGGTGGA...CTTGACTTCTACTCTTGCCTCTCTTTTGCAGTTAGCTGTGTAACTTTGGATAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR TCA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCTTGTTCCCTAGAGAATaGGAAAAATGGAGGCACCAC +
Preference number: 4 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFLFPRE*EKWRHH
Trigger: GTGGTGCCTCCATTTTTCTCATTCTCTAGGGAACAA...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR TCA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCTTGGGGTTAAAGACATaGAATGGGGTGATTCTAGGG +
Preference number: 4 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFLGLKT*NGVILG
Trigger: CCCTAGAATCACCCCATTTCATGTCTTTAACCCCAA...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR GCA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCAATCTGGGAACCTACTaGATTCCATATCTTCAGGCC +
Preference number: 4 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFNLGTY*IPYLQA
Trigger: GGCCTGAAGATATGGAATGCAGTAGGTTCCCAGATT...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR GCA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCGGAAGCCTTATATTGTaGAGGGATGGATGCATTGCA +
Preference number: 4 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFGSLIL*RDGCIA
Trigger: TGCAATGCATCCATCCCTGCACAATATAAGGCTTCC...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR GCA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTATCCGGGGATGCCCCATaGACTGGCGTGAAACAGCAA +
Preference number: 4 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLSGDAP*TGVKQQ
Trigger: TTGCTGTTTCACGCCAGTGCATGGGGCATCCCCGGA...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR GCA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTAGGCTGCCGTGGTAGCTaGTCACTTTGCTGTGGATGC +
Preference number: 4 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLGCRGS*SLCCGC
Trigger: GCATCCACAGCAAAGTGAGCAGCTACCACGGCAGCC...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR GCA 90 bp CTTATCCAAAGTTACACAGCTAACTGCAAAAGAGAGGCAAGAGTAGAAGTCAAGCCATTCCTCTGTAACTaGAGGGCGTGTACCTGCCAT +
Preference number: 4 (lower is better)
Translates to: LIQSYTANCKREARVEVKPFLCN*RACTCH
Trigger: ATGGCAGGTACACGCCCTGCAGTTACAGAGGAATGG...CTTGACTTCTACTCTTGCCTCTCTTTTGCAGTTAGCTGTGTAACTTTGGATAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR GCA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCATGAAGACATTCACTTaGCCATGGCAATCTGGCAAC +
Preference number: 4 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFMKTFT*PWQSGN
Trigger: GTTGCCAGATTGCCATGGGCAAGTGAATGTCTTCAT...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR CCA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCAGATTCACCATAGGGTaGAATGGCTCCATTGCCAAA +
Preference number: 4 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFRFTIG*NGSIAK
Trigger: TTTGGCAATGGAGCCATTCCACCCTATGGTGAATCT...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR CCA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCTGGCTCATCACAATCTaGGAACCTACTGCATTCCAT +
Preference number: 4 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFWLITI*EPTAFH
Trigger: ATGGAATGCAGTAGGTTCCCAGATTGTGATGAGCCA...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR CCA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCCACAAGTCGAGGATATaGCTCATCACAATCTGGGAA +
Preference number: 4 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFHKSRI*LITIWE
Trigger: TTCCCAGATTGTGATGAGCCATATCCTCGACTTGTG...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR CCA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCTATATTGTGCAGGGATaGATGCATTGCAGGCTACTC +
Preference number: 4 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFYIVQG*MHCRLL
Trigger: GAGTAGCCTGCAATGCATCCATCCCTGCACAATATA...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR CCA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCGAGAACTACTATGCCTaGAGTGATCTGTTAGTCGTG +
Preference number: 4 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFENYYA*SDLLVV
Trigger: CACGACTAACAGATCACTCCAGGCATAGTAGTTCTC...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR CCA 90 bp CTTATCCAAAGTTACACAGCTAACTGCAAAAGAGAGGCAAGAGTAGAAGTCAAGCTGGAAGCCAAGGTCTaGTGGCTTTGGCAAGATCAC +
Preference number: 4 (lower is better)
Translates to: LIQSYTANCKREARVEVKLEAKV*WLWQDH
Trigger: GTGATCTTGCCAAAGCCACCAGACCTTGGCTTCCAG...CTTGACTTCTACTCTTGCCTCTCTTTTGCAGTTAGCTGTGTAACTTTGGATAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
3UTR CAA 72 bp TGTGAAATTCCCAGTTCATGCTCTAACCAAGTGCACTaGCCCTGTACATCCCAACAACAGCAACTTTTCCAC +
Preference number: 4 (lower is better)
Translates to: CEIPSSCSNQVH*PCTSQQQQLFH
Trigger: GTGGAAAAGTTGCTGTTGTTGGGATGTACAGGGCAAGTGCACTTGGTTAGAGCATGAACTGGGAATTTCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR TCA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCGCCAACATATCAAGTTaGTCAACCACATTCCCAAAC +
Preference number: 4 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFANISS*STTFPN
Trigger: GTTTGGGAATGTGGTTGATCAACTTGATATGTTGGC...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR TCA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCGTACAGGCTTTATTATaGGATCCTTGTGTCACTGTG +
Preference number: 4 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFVQALL*DPCVTV
Trigger: CACAGTGACACAAGGATCTCATAATAAAGCCTGTAC...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR TCA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCGTGTTTTGGATGCCTTaGTGTTCCAAGTTTGATGCA +
Preference number: 4 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFVFWMP*CSKFDA
Trigger: TGCATCAAACTTGGAACATCAAGGCATCCAAAACAC...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR TCA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCTGTTCATGTGATATATaGTGCCGACAGATCATCAGG +
Preference number: 4 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFCSCDI*CRQIIR
Trigger: CCTGATGATCTGTCGGCATCATATATCACATGAACA...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR TCA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCGCCCAGTTGACATCATaGGTCTTAAAATTCCAATCC +
Preference number: 4 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFAQLTS*VLKFQS
Trigger: GGATTGGAATTTTAAGACTCATGATGTCAACTGGGC...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR GCA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCAGATATTTATACACCTaGAGGTCTCAGCTCGAAGGT +
Preference number: 4 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFRYLYT*RSQLEG
Trigger: ACCTTCGAGCTGAGACCTGCAGGTGTATAAATATCT...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR GCA 90 bp CTTATCCAAAGTTACACAGCTAACTGCAAAAGAGAGGCAAGAGTAGAAGTCAAGCTGTGCCCACCTATATaGCCCATGAACACAGTCAAG +
Preference number: 4 (lower is better)
Translates to: LIQSYTANCKREARVEVKLCPPI*PMNTVK
Trigger: CTTGACTGTGTTCATGGGGCATATAGGTGGGCACAG...CTTGACTTCTACTCTTGCCTCTCTTTTGCAGTTAGCTGTGTAACTTTGGATAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR GCA 90 bp CTTATCCAAAGTTACACAGCTAACTGCAAAAGAGAGGCAAGAGTAGAAGTCAAGTTGTGCAGGGATGGATaGATTGCAGGCTACTCGATC +
Preference number: 4 (lower is better)
Translates to: LIQSYTANCKREARVEVKLCRDG*IAGYSI
Trigger: GATCGAGTAGCCTGCAATGCATCCATCCCTGCACAA...CTTGACTTCTACTCTTGCCTCTCTTTTGCAGTTAGCTGTGTAACTTTGGATAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR GCA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCGGCGTGAAACAGCAATaGTTTCTTCTCAATAGCTTC +
Preference number: 4 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFGVKQQ*FLLNSF
Trigger: GAAGCTATTGAGAAGAAAGCATTGCTGTTTCACGCC...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR GCA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTATTAGAGTTCCGGGGATaGCCCATGCACTGGCGTGAA +
Preference number: 4 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLLEFRG*PMHWRE
Trigger: TTCACGCCAGTGCATGGGGCATCCCCGGAACTCTAA...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR GCA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTAGTGATCTGTGGAGGCTaGCGTGGTAGCTGCTCACTT +
Preference number: 4 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLVICGG*RGSCSL
Trigger: AAGTGAGCAGCTACCACGGCAGCCTCCACAGATCAC...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR GCA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTATGCAGGGCGTGTACCTaGCATCACGTGATCTGTGGA +
Preference number: 4 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLCRACT*HHVICG
Trigger: TCCACAGATCACGTGATGGCAGGTACACGCCCTGCA...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR GCA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCGAAATTCCCAGTTCATaGTCTAACCAAGTGCACTTG +
Preference number: 4 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFEIPSS*SNQVHL
Trigger: CAAGTGCACTTGGTTAGAGCATGAACTGGGAATTTC...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR CCA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCAGAGGTTTGTTAGCTTaGTCTCACAAAAGGCGTTTG +
Preference number: 4 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFRGLLA*SHKRRL
Trigger: CAAACGCCTTTTGTGAGACCAAGCTAACAAACCTCT...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR CCA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCATCCTTGTGTCACTGTaGAAGCCTTATATTGTGCAG +
Preference number: 4 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFILVSL*KPYIVQ
Trigger: CTGCACAATATAAGGCTTCCACAGTGACACAAGGAT...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR CCA 90 bp CTTATCCAAAGTTACACAGCTAACTGCAAAAGAGAGGCAAGAGTAGAAGTCAAGGCAAAATCAGGTTCCTaGAGTACCTGTCGGCTCTCA +
Preference number: 4 (lower is better)
Translates to: LIQSYTANCKREARVEVKAKSGS*STCRLS
Trigger: TGAGAGCCGACAGGTACTCCAGGAACCTGATTTTGC...CTTGACTTCTACTCTTGCCTCTCTTTTGCAGTTAGCTGTGTAACTTTGGATAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR CCA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCTATGATAGGAGTATTTaGATCCCTCAGGAGAGACTG +
Preference number: 4 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFYDRSI*IPQERL
Trigger: CAGTCTCTCCTGAGGGATCCAAATACTCCTATCATA...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR CCA 90 bp CTTATCCAAAGTTACACAGCTAACTGCAAAAGAGAGGCAAGAGTAGAAGTCAAGACAGTCTTAGCTACTTaGGAGGCTGAAGCTGGAGGA +
Preference number: 4 (lower is better)
Translates to: LIQSYTANCKREARVEVKTVLAT*EAEAGG
Trigger: TCCTCCAGCTTCAGCCTCCCAAGTAGCTAAGACTGT...CTTGACTTCTACTCTTGCCTCTCTTTTGCAGTTAGCTGTGTAACTTTGGATAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR CCA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCAAGGATGGCTGGTTCTaGGTAGACTTCAACATTTTC +
Preference number: 4 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFKDGWF*VDFNIF
Trigger: GAAAATGTTGAAGTCTACCCAGAACCAGCCATCCTT...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR CCA 90 bp CTTATCCAAAGTTACACAGCTAACTGCAAAAGAGAGGCAAGAGTAGAAGTCAAGGTTTCAGACATCACATaGGTTTGGGCAAAGGGGGCA +
Preference number: 4 (lower is better)
Translates to: LIQSYTANCKREARVEVKVSDIT*VWAKGA
Trigger: TGCCCCCTTTGCCCAAACCCATGTGATGTCTGAAAC...CTTGACTTCTACTCTTGCCTCTCTTTTGCAGTTAGCTGTGTAACTTTGGATAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
3UTR CAA 72 bp AGAAGGCAGGTAAGGAAGTTTTGGAGAATGCAGCATTaGAGGAATAGGTCACATGAAGAGGGTATCATGAGC +
Preference number: 4 (lower is better)
Translates to: RRQVRKFWRMQH*RNRSHEEGIMS
Trigger: GCTCATGATACCCTCTTCATGTGACCTATTCCTCAAATGCTGCATTCTCCAAAACTTCCTTACCTGCCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR TCA 90 bp CTTATCCAAAGTTACACAGCTAACTGCAAAAGAGAGGCAAGAGTAGAAGTCAAGTACGACAGGGAAGTGTaGCACGTCCATATTCCATAC +
Preference number: 4 (lower is better)
Translates to: LIQSYTANCKREARVEVKYDREV*HVHIPY
Trigger: GTATGGAATATGGACGTGTCACACTTCCCTGTCGTA...CTTGACTTCTACTCTTGCCTCTCTTTTGCAGTTAGCTGTGTAACTTTGGATAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR TCA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCGAAATAGCGAGCAAATaGCAGTTCTTCTCTTCTGAA +
Preference number: 4 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFEIASK*QFFSSE
Trigger: TTCAGAAGAGAAGAACTGTCATTTGCTCGCTATTTC...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR TCA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTACCCCATGCACTGGCGTaGAACAGCAATGCTTTCTTC +
Preference number: 4 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLPHALA*NSNAFF
Trigger: GAAGAAAGCATTGCTGTTTCACGCCAGTGCATGGGG...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR TCA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTATCCCTCAGGAGAGACTaGGCAAAATCAGGTTCCTGG +
Preference number: 4 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLSLRRD*AKSGSW
Trigger: CCAGGAACCTGATTTTGCTCAGTCTCTCCTGAGGGA...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR TCA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTATCCACCATAGCCAGCTaGGTTGAAGAAGCATGGGTG +
Preference number: 4 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLSTIAS*VEEAWV
Trigger: CACCCATGCTTCTTCAACTCAGCTGGCTATGGTGGA...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR TCA 90 bp CTTATCCAAAGTTACACAGCTAACTGCAAAAGAGAGGCAAGAGTAGAAGTCAAGTGTTCATTGAGCCGATaGGAACTACTATGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: LIQSYTANCKREARVEVKCSLSR*ELLCLE
Trigger: CTCCAGGCATAGTAGTTCTCATCGGCTCAATGAACA...CTTGACTTCTACTCTTGCCTCTCTTTTGCAGTTAGCTGTGTAACTTTGGATAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR TCA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCGGTTATAATGAACTATaGTTATGCCACTGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFGYNEL*LCHCSP
Trigger: TGGAGAGCAGTGGCATAATCATAGTTCATTATAACC...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR TCA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCTGCCTTTCAACAGATTaGACTACTGTGTCTTATAGG +
Preference number: 4 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFCLSTD*TTVSYR
Trigger: CCTATAAGACACAGTAGTTCAATCTGTTGAAAGGCA...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR GCA 90 bp CTTATCCAAAGTTACACAGCTAACTGCAAAAGAGAGGCAAGAGTAGAAGTCAAGCTGTTAGTCGTGACATaGTGCCATGAGGTAGTCTCT +
Preference number: 4 (lower is better)
Translates to: LIQSYTANCKREARVEVKLLVVT*CHEVVS
Trigger: AGAGACTACCTCATGGCAGCATGTCACGACTAACAG...CTTGACTTCTACTCTTGCCTCTCTTTTGCAGTTAGCTGTGTAACTTTGGATAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR GCA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCAGTTACACAGCTAACTaGAAAAGAGAGGCAAGAGTA +
Preference number: 4 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFSYTAN*KREARV
Trigger: TACTCTTGCCTCTCTTTTGCAGTTAGCTGTGTAACT...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR GCA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTAGAGGAGCGATCCACATaGCGAGATGACCGCGATAAT +
Preference number: 4 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLEERST*RDDRDN
Trigger: ATTATCGCGGTCATCTCGGCATGTGGATCGCTCCTC...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR CCA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCTACATGGGGCACATTTaGCCAACATATCAAGTTGAT +
Preference number: 4 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFYMGHI*PTYQVD
Trigger: ATCAACTTGATATGTTGGCCAAATGTGCCCCATGTA...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR CCA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCACATTCACTTGCCCATaGCAATCTGGCAACTATATT +
Preference number: 4 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFTFTCP*QSGNYI
Trigger: AATATAGTTGCCAGATTGCCATGGGCAAGTGAATGT...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR CCA 90 bp CTTATCCAAAGTTACACAGCTAACTGCAAAAGAGAGGCAAGAGTAGAAGTCAAGCAAAACCAAGACACCTaGAGTACCTCTATGGGGTGT +
Preference number: 4 (lower is better)
Translates to: LIQSYTANCKREARVEVKQNQDT*STSMGC
Trigger: ACACCCCATAGAGGTACTCCAGGTGTCTTGGTTTTG...CTTGACTTCTACTCTTGCCTCTCTTTTGCAGTTAGCTGTGTAACTTTGGATAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR TCA 90 bp CTTATCCAAAGTTACACAGCTAACTGCAAAAGAGAGGCAAGAGTAGAAGTCAAGCGAGATAAAGAATGCTaGAAACACCGATCCGGATCA +
Preference number: 4 (lower is better)
Translates to: LIQSYTANCKREARVEVKRDKEC*KHRSGS
Trigger: TGATCCGGATCGGTGTTTTCAGCATTCTTTATCTCG...CTTGACTTCTACTCTTGCCTCTCTTTTGCAGTTAGCTGTGTAACTTTGGATAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR TCA 90 bp CTTATCCAAAGTTACACAGCTAACTGCAAAAGAGAGGCAAGAGTAGAAGTCAAGAGGGAATGCCAACTATaGGAGCCATCAGGTATTTCA +
Preference number: 4 (lower is better)
Translates to: LIQSYTANCKREARVEVKRECQL*EPSGIS
Trigger: TGAAATACCTGATGGCTCTCATAGTTGGCATTCCCT...CTTGACTTCTACTCTTGCCTCTCTTTTGCAGTTAGCTGTGTAACTTTGGATAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR TCA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTACCTGCTTTGCTTCTTTaGTCATCCACCATAGCCAGC +
Preference number: 4 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLPALLL*SSTIAS
Trigger: GCTGGCTATGGTGGATGATCAAAGAAGCAAAGCAGG...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR TCA 90 bp CTTATCCAAAGTTACACAGCTAACTGCAAAAGAGAGGCAAGAGTAGAAGTCAAGGTCGTGACTGTTCATTaGGCCGATGAGAACTACTAT +
Preference number: 4 (lower is better)
Translates to: LIQSYTANCKREARVEVKVVTVH*ADENYY
Trigger: ATAGTAGTTCTCATCGGCTCAATGAACAGTCACGAC...CTTGACTTCTACTCTTGCCTCTCTTTTGCAGTTAGCTGTGTAACTTTGGATAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR TCA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTAGCAGATGGCAATGGATaGCAACATCTTCGAGCCCAA +
Preference number: 4 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLADGNG*QHLRAQ
Trigger: TTGGGCTCGAAGATGTTGTCATCCATTGCCATCTGC...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR TCA 90 bp CTTATCCAAAGTTACACAGCTAACTGCAAAAGAGAGGCAAGAGTAGAAGTCAAGTTGAAAAACTGTGTATaGATCCCTGTGCCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: LIQSYTANCKREARVEVKLKNCV*IPVPAE
Trigger: CTCAGCTGGCACAGGGATTCATACACAGTTTTTCAA...CTTGACTTCTACTCTTGCCTCTCTTTTGCAGTTAGCTGTGTAACTTTGGATAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR TCA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCAGAAGACTTGGATCCTaGGAGAAAATTGTAATCCTA +
Preference number: 4 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFRRLGS*EKIVIL
Trigger: TAGGATTACAATTTTCTCTCAGGATCCAAGTCTTCT...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR TCA 90 bp CTTATCCAAAGTTACACAGCTAACTGCAAAAGAGAGGCAAGAGTAGAAGTCAAGCCCAACACCCAGATTTaGACCAGTGTTCAAAAGACT +
Preference number: 4 (lower is better)
Translates to: LIQSYTANCKREARVEVKPNTQI*TSVQKT
Trigger: AGTCTTTTGAACACTGGTTCAAATCTGGGTGTTGGG...CTTGACTTCTACTCTTGCCTCTCTTTTGCAGTTAGCTGTGTAACTTTGGATAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR TCA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCAGTTACATGATCCAGTaGAATGACATAAGACAAGGA +
Preference number: 4 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFSYMIQ*NDIRQG
Trigger: TCCTTGTCTTATGTCATTTCACTGGATCATGTAACT...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR TCA 90 bp CTTATCCAAAGTTACACAGCTAACTGCAAAAGAGAGGCAAGAGTAGAAGTCAAGGGAGAATGCAGCATTTaGGGAATAGGTCACATGAAG +
Preference number: 4 (lower is better)
Translates to: LIQSYTANCKREARVEVKGECSI*GIGHMK
Trigger: CTTCATGTGACCTATTCCTCAAATGCTGCATTCTCC...CTTGACTTCTACTCTTGCCTCTCTTTTGCAGTTAGCTGTGTAACTTTGGATAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR TCA 90 bp CTTATCCAAAGTTACACAGCTAACTGCAAAAGAGAGGCAAGAGTAGAAGTCAAGGCACATCAGAGAATGTaGAATTCCCAGTTCATGCTC +
Preference number: 4 (lower is better)
Translates to: LIQSYTANCKREARVEVKAHQRM*NSQFML
Trigger: GAGCATGAACTGGGAATTTCACATTCTCTGATGTGC...CTTGACTTCTACTCTTGCCTCTCTTTTGCAGTTAGCTGTGTAACTTTGGATAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR GCA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTACTGTGCCCACCTATATaGCCCATGAACACAGTCAAG +
Preference number: 4 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLLCPPI*PMNTVK
Trigger: CTTGACTGTGTTCATGGGGCATATAGGTGGGCACAG...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR GCA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTATTGTGCAGGGATGGATaGATTGCAGGCTACTCGATC +
Preference number: 4 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLLCRDG*IAGYSI
Trigger: GATCGAGTAGCCTGCAATGCATCCATCCCTGCACAA...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR GCA 90 bp CTTATCCAAAGTTACACAGCTAACTGCAAAAGAGAGGCAAGAGTAGAAGTCAAGATGAAGACATTCACTTaGCCATGGCAATCTGGCAAC +
Preference number: 4 (lower is better)
Translates to: LIQSYTANCKREARVEVKMKTFT*PWQSGN
Trigger: GTTGCCAGATTGCCATGGGCAAGTGAATGTCTTCAT...CTTGACTTCTACTCTTGCCTCTCTTTTGCAGTTAGCTGTGTAACTTTGGATAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR GCA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCCTTAATGGTATCTCTTaGCTCAAAATAGTCCCATCA +
Preference number: 4 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFLNGIS*LKIVPS
Trigger: TGATGGGACTATTTTGAGGCAAGAGATACCATTAAG...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR GCA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTACATGCTCTAACCAAGTaGACTTGCCCTGTACATCCC +
Preference number: 4 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLHALTK*TCPVHP
Trigger: GGGATGTACAGGGCAAGTGCACTTGGTTAGAGCATG...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR CCA 90 bp CTTATCCAAAGTTACACAGCTAACTGCAAAAGAGAGGCAAGAGTAGAAGTCAAGAGATTCACCATAGGGTaGAATGGCTCCATTGCCAAA +
Preference number: 4 (lower is better)
Translates to: LIQSYTANCKREARVEVKRFTIG*NGSIAK
Trigger: TTTGGCAATGGAGCCATTCCACCCTATGGTGAATCT...CTTGACTTCTACTCTTGCCTCTCTTTTGCAGTTAGCTGTGTAACTTTGGATAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR CCA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCAACCTGATATGGACATaGAATGTGATATTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFNLIWT*NVIFSA
Trigger: TGCAGAGAATATCACATTCCATGTCCATATCAGGTT...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR CCA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCAAAGAGAATCAAGTCTaGACGACTCATTTGAGTAAC +
Preference number: 4 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFKENQV*TTHLSN
Trigger: GTTACTCAAATGAGTCGTCCAGACTTGATTCTCTTT...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR CCA 90 bp CTTATCCAAAGTTACACAGCTAACTGCAAAAGAGAGGCAAGAGTAGAAGTCAAGTTGAAGAAGCATGGGTaGATGTTCCTTGAGTGGAAG +
Preference number: 4 (lower is better)
Translates to: LIQSYTANCKREARVEVKLKKHG*MFLEWK
Trigger: CTTCCACTCAAGGAACATCCACCCATGCTTCTTCAA...CTTGACTTCTACTCTTGCCTCTCTTTTGCAGTTAGCTGTGTAACTTTGGATAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR CCA 90 bp CTTATCCAAAGTTACACAGCTAACTGCAAAAGAGAGGCAAGAGTAGAAGTCAAGCTGAAAATAAGGGTGTaGGGCAAAAGCTGTAGCCTA +
Preference number: 4 (lower is better)
Translates to: LIQSYTANCKREARVEVKLKIRV*GKSCSL
Trigger: TAGGCTACAGCTTTTGCCCCACACCCTTATTTTCAG...CTTGACTTCTACTCTTGCCTCTCTTTTGCAGTTAGCTGTGTAACTTTGGATAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR CCA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTAAAAACTAGCTGGATGTaGTGGCACGCACCTGTAGTC +
Preference number: 4 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLKTSWM*WHAPVV
Trigger: GACTACAGGTGCGTGCCACCACATCCAGCTAGTTTT...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR CCA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCGTTAAAGACATGAAATaGGGTGATTCTAGGGAAGTT +
Preference number: 4 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFVKDMK*GDSREV
Trigger: AACTTCCCTAGAATCACCCCATTTCATGTCTTTAAC...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR CCA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTAGTTTCAGACATCACATaGGTTTGGGCAAAGGGGGCA +
Preference number: 4 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLVSDIT*VWAKGA
Trigger: TGCCCCCTTTGCCCAAACCCATGTGATGTCTGAAAC...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR CCA 90 bp CTTATCCAAAGTTACACAGCTAACTGCAAAAGAGAGGCAAGAGTAGAAGTCAAGTCAATGAGAAAGAGCTaGAAGACAGACCTAGCTGTC +
Preference number: 4 (lower is better)
Translates to: LIQSYTANCKREARVEVKSMRKS*KTDLAV
Trigger: GACAGCTAGGTCTGTCTTCCAGCTCTTTCTCATTGA...CTTGACTTCTACTCTTGCCTCTCTTTTGCAGTTAGCTGTGTAACTTTGGATAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR TCA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTACACCAAACATCTCCATaGGCTTCGAACACTCACTGT +
Preference number: 4 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLHQTSP*ASNTHC
Trigger: ACAGTGAGTGTTCGAAGCTCATGGAGATGTTTGGTG...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR TCA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTAATTTGGACAAGGAGGTaGACAATCACGCACATGCAG +
Preference number: 4 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLIWTRR*TITHMQ
Trigger: CTGCATGTGCGTGATTGTTCACCTCCTTGTCCAAAT...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR TCA 90 bp CTTATCCAAAGTTACACAGCTAACTGCAAAAGAGAGGCAAGAGTAGAAGTCAAGAGTGGAAGTTCCCCTTaGCTTTCTTATGATAGGAGT +
Preference number: 4 (lower is better)
Translates to: LIQSYTANCKREARVEVKSGSSP*LSYDRS
Trigger: ACTCCTATCATAAGAAAGTCAAGGGGAACTTCCACT...CTTGACTTCTACTCTTGCCTCTCTTTTGCAGTTAGCTGTGTAACTTTGGATAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR TCA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTACTACTATGCCTGGAGTaGTCTGTTAGTCGTGACATG +
Preference number: 4 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLLLCLE*SVSRDM
Trigger: CATGTCACGACTAACAGATCACTCCAGGCATAGTAG...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR TCA 90 bp CTTATCCAAAGTTACACAGCTAACTGCAAAAGAGAGGCAAGAGTAGAAGTCAAGGTGCCATGTGTGATATaGGTCATGGGATTATTACTG +
Preference number: 4 (lower is better)
Translates to: LIQSYTANCKREARVEVKVPCVI*VMGLLL
Trigger: CAGTAATAATCCCATGACTCATATCACACATGGCAC...CTTGACTTCTACTCTTGCCTCTCTTTTGCAGTTAGCTGTGTAACTTTGGATAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR TCA 90 bp CTTATCCAAAGTTACACAGCTAACTGCAAAAGAGAGGCAAGAGTAGAAGTCAAGCTCAGAGAAATAAAATaGCCAGCCCAGTTGACATCA +
Preference number: 4 (lower is better)
Translates to: LIQSYTANCKREARVEVKLREIK*PAQLTS
Trigger: TGATGTCAACTGGGCTGGTCATTTTATTTCTCTGAG...CTTGACTTCTACTCTTGCCTCTCTTTTGCAGTTAGCTGTGTAACTTTGGATAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR TCA 90 bp CTTATCCAAAGTTACACAGCTAACTGCAAAAGAGAGGCAAGAGTAGAAGTCAAGCAGGGAAAAATTATCTaGGGCAGGGATAAAGGAAGA +
Preference number: 4 (lower is better)
Translates to: LIQSYTANCKREARVEVKQGKII*GRDKGR
Trigger: TCTTCCTTTATCCCTGCCTCAGATAATTTTTCCCTG...CTTGACTTCTACTCTTGCCTCTCTTTTGCAGTTAGCTGTGTAACTTTGGATAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR TCA 90 bp CTTATCCAAAGTTACACAGCTAACTGCAAAAGAGAGGCAAGAGTAGAAGTCAAGATGAAGAGGGTATCATaGGCATATTGCCTAGGAAGA +
Preference number: 4 (lower is better)
Translates to: LIQSYTANCKREARVEVKMKRVS*AYCLGR
Trigger: TCTTCCTAGGCAATATGCTCATGATACCCTCTTCAT...CTTGACTTCTACTCTTGCCTCTCTTTTGCAGTTAGCTGTGTAACTTTGGATAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR GCA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCCATCATGTAGCAGACTaGATAAAATATAATAGGCCT +
Preference number: 4 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFHHVAD*IKYNRP
Trigger: AGGCCTATTATATTTTATGCAGTCTGCTACATGATG...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR GCA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTACAGGGATGGATGCATTaGAGGCTACTCGATCTTCAA +
Preference number: 4 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLQGWMH*RLLDLQ
Trigger: TTGAAGATCGAGTAGCCTGCAATGCATCCATCCCTG...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR GCA 90 bp CTTATCCAAAGTTACACAGCTAACTGCAAAAGAGAGGCAAGAGTAGAAGTCAAGTCACTTTGCTGTGGATaGTTCCTGCTTTGCTTCTTT +
Preference number: 4 (lower is better)
Translates to: LIQSYTANCKREARVEVKSLCCG*FLLCFF
Trigger: AAAGAAGCAAAGCAGGAAGCATCCACAGCAAAGTGA...CTTGACTTCTACTCTTGCCTCTCTTTTGCAGTTAGCTGTGTAACTTTGGATAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR GCA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTATTAGTCGTGACATGCTaGCATGAGGTAGTCTCTCCT +
Preference number: 4 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLLVVTC*HEVVSP
Trigger: AGGAGAGACTACCTCATGGCAGCATGTCACGACTAA...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR GCA 90 bp CTTATCCAAAGTTACACAGCTAACTGCAAAAGAGAGGCAAGAGTAGAAGTCAAGTCTACCAGAGAACTCTaGGGAGATATGGAACTAATG +
Preference number: 4 (lower is better)
Translates to: LIQSYTANCKREARVEVKSTREL*GDMELM
Trigger: CATTAGTTCCATATCTCCGCAGAGTTCTCTGGTAGA...CTTGACTTCTACTCTTGCCTCTCTTTTGCAGTTAGCTGTGTAACTTTGGATAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR GCA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTACTAACCAAGTGCACTTaGCCTGTACATCCCAACAAC +
Preference number: 4 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLLTKCT*PVHPNN
Trigger: GTTGTTGGGATGTACAGGGCAAGTGCACTTGGTTAG...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR GCA 90 bp CTTATCCAAAGTTACACAGCTAACTGCAAAAGAGAGGCAAGAGTAGAAGTCAAGGAAATTCCCAGTTCATaGTCTAACCAAGTGCACTTG +
Preference number: 4 (lower is better)
Translates to: LIQSYTANCKREARVEVKEIPSS*SNQVHL
Trigger: CAAGTGCACTTGGTTAGAGCATGAACTGGGAATTTC...CTTGACTTCTACTCTTGCCTCTCTTTTGCAGTTAGCTGTGTAACTTTGGATAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR CCA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCTTTCATTTTATTACATaGGGCACATTTGGCCAACAT +
Preference number: 4 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFFHFIT*GTFGQH
Trigger: ATGTTGGCCAAATGTGCCCCATGTAATAAAATGAAA...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR CCA 90 bp CTTATCCAAAGTTACACAGCTAACTGCAAAAGAGAGGCAAGAGTAGAAGTCAAGAGAGGTTTGTTAGCTTaGTCTCACAAAAGGCGTTTG +
Preference number: 4 (lower is better)
Translates to: LIQSYTANCKREARVEVKRGLLA*SHKRRL
Trigger: CAAACGCCTTTTGTGAGACCAAGCTAACAAACCTCT...CTTGACTTCTACTCTTGCCTCTCTTTTGCAGTTAGCTGTGTAACTTTGGATAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR CCA 90 bp CTTATCCAAAGTTACACAGCTAACTGCAAAAGAGAGGCAAGAGTAGAAGTCAAGATCCTTGTGTCACTGTaGAAGCCTTATATTGTGCAG +
Preference number: 4 (lower is better)
Translates to: LIQSYTANCKREARVEVKILVSL*KPYIVQ
Trigger: CTGCACAATATAAGGCTTCCACAGTGACACAAGGAT...CTTGACTTCTACTCTTGCCTCTCTTTTGCAGTTAGCTGTGTAACTTTGGATAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR CCA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTAGTACAGCCCAGAATTTaGCATCAGGTGCAGAACAAC +
Preference number: 4 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLVQPRI*HQVQNN
Trigger: GTTGTTCTGCACCTGATGCCAAATTCTGGGCTGTAC...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR CCA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCGTACCAAATGAACACTaGTCTAATTGCCTATTTTGT +
Preference number: 4 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFVPNEH*SNCLFC
Trigger: ACAAAATAGGCAATTAGACCAGTGTTCATTTGGTAC...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR CCA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTAGTCTACAAGGATGGCTaGTTCTGGGTAGACTTCAAC +
Preference number: 4 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLVYKDG*FWVDFN
Trigger: GTTGAAGTCTACCCAGAACCAGCCATCCTTGTAGAC...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR CCA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCTTGCCCATGGCAATCTaGCAACTATATTTATGTAAT +
Preference number: 4 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFLPMAI*QLYLCN
Trigger: ATTACATAAATATAGTTGCCAGATTGCCATGGGCAA...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR CCA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTACAAAACCAAGACACCTaGAGTACCTCTATGGGGTGT +
Preference number: 4 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLQNQDT*STSMGC
Trigger: ACACCCCATAGAGGTACTCCAGGTGTCTTGGTTTTG...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR TCA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTATGCTGGTGCCATGTGTaGTATGAGTCATGGGATTAT +
Preference number: 4 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLCWCHV*YESWDY
Trigger: ATAATCCCATGACTCATATCACACATGGCACCAGCA...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR TCA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTAACTAATTGTCGGTTATaGGGGAATTCAGACCTGCCT +
Preference number: 4 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLTNCRL*GNSDLP
Trigger: AGGCAGGTCTGAATTCCCTCATAACCGACAATTAGT...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR TCA 90 bp CTTATCCAAAGTTACACAGCTAACTGCAAAAGAGAGGCAAGAGTAGAAGTCAAGGGTTATAATGAACTATaGTTATGCCACTGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: LIQSYTANCKREARVEVKGYNEL*LCHCSP
Trigger: TGGAGAGCAGTGGCATAATCATAGTTCATTATAACC...CTTGACTTCTACTCTTGCCTCTCTTTTGCAGTTAGCTGTGTAACTTTGGATAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR TCA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTATTGAGGTCAGGAGTTTaGGACCAACATGGCAAAACT +
Preference number: 4 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLLRSGV*DQHGKT
Trigger: AGTTTTGCCATGTTGGTCTCAAACTCCTGACCTCAA...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR TCA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTAAAAAACCCAGGAGACTaGTTACAATCAGACGGAAGG +
Preference number: 4 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLKNPGD*LQSDGR
Trigger: CCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTTT...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR TCA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTATTGTTCCCTAGAGAATaGGAAAAATGGAGGCACCAC +
Preference number: 4 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLLFPRE*EKWRHH
Trigger: GTGGTGCCTCCATTTTTCTCATTCTCTAGGGAACAA...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR TCA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTATTGGGGTTAAAGACATaGAATGGGGTGATTCTAGGG +
Preference number: 4 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLLGLKT*NGVILG
Trigger: CCCTAGAATCACCCCATTTCATGTCTTTAACCCCAA...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR TCA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTAGCACATCAGAGAATGTaGAATTCCCAGTTCATGCTC +
Preference number: 4 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLAHQRM*NSQFML
Trigger: GAGCATGAACTGGGAATTTCACATTCTCTGATGTGC...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR TCA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTAATTTCTTCCTTCAACTaGAATATCTCAGACCCCGGC +
Preference number: 4 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLISSFN*NISDPG
Trigger: GCCGGGGTCTGAGATATTTCAGTTGAAGGAAGAAAT...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537916.2
CDS-3UTR GCA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTAGGAAGCCTTATATTGTaGAGGGATGGATGCATTGCA +
Preference number: 4 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLGSLIL*RDGCIA
Trigger: TGCAATGCATCCATCCCTGCACAATATAAGGCTTCC...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR GCA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTAATTGGGCAAGGCAAGTaGAGACAATCAACTCACTAC +
Preference number: 4 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLIGQGK*RQSTHY
Trigger: GTAGTGAGTTGATTGTCTGCACTTGCCTTGCCCAAT...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR GCA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTAAGTTTCAAGCCAGGCTaGAGATTAGAATCACCTGGA +
Preference number: 4 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLSFKPG*RLESPG
Trigger: TCCAGGTGATTCTAATCTGCAGCCTGGCTTGAAACT...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR GCA 90 bp CTTATCCAAAGTTACACAGCTAACTGCAAAAGAGAGGCAAGAGTAGAAGTCAAGGTTTTAGTTCTCTCATaGTGTTTGCAGGAGAGATTC +
Preference number: 4 (lower is better)
Translates to: LIQSYTANCKREARVEVKVLVLS*CLQERF
Trigger: GAATCTCTCCTGCAAACAGCATGAGAGAACTAAAAC...CTTGACTTCTACTCTTGCCTCTCTTTTGCAGTTAGCTGTGTAACTTTGGATAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR CCA 90 bp CTTATCCAAAGTTACACAGCTAACTGCAAAAGAGAGGCAAGAGTAGAAGTCAAGTACATGGGGCACATTTaGCCAACATATCAAGTTGAT +
Preference number: 4 (lower is better)
Translates to: LIQSYTANCKREARVEVKYMGHI*PTYQVD
Trigger: ATCAACTTGATATGTTGGCCAAATGTGCCCCATGTA...CTTGACTTCTACTCTTGCCTCTCTTTTGCAGTTAGCTGTGTAACTTTGGATAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR CCA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTATGGCTCATCACAATCTaGGAACCTACTGCATTCCAT +
Preference number: 4 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLWLITI*EPTAFH
Trigger: ATGGAATGCAGTAGGTTCCCAGATTGTGATGAGCCA...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR CCA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTATATATTGTGCAGGGATaGATGCATTGCAGGCTACTC +
Preference number: 4 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLYIVQG*MHCRLL
Trigger: GAGTAGCCTGCAATGCATCCATCCCTGCACAATATA...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR CCA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTATTGAAGAAGCATGGGTaGATGTTCCTTGAGTGGAAG +
Preference number: 4 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLLKKHG*MFLEWK
Trigger: CTTCCACTCAAGGAACATCCACCCATGCTTCTTCAA...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR CCA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTAGAGAACTACTATGCCTaGAGTGATCTGTTAGTCGTG +
Preference number: 4 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLENYYA*SDLLVV
Trigger: CACGACTAACAGATCACTCCAGGCATAGTAGTTCTC...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR CCA 90 bp CTTATCCAAAGTTACACAGCTAACTGCAAAAGAGAGGCAAGAGTAGAAGTCAAGCATTTACCTTTCCAGTaGACACAATCTGTACTTGAC +
Preference number: 4 (lower is better)
Translates to: LIQSYTANCKREARVEVKHLPFQ*TQSVLD
Trigger: GTCAAGTACAGATTGTGTCCACTGGAAAGGTAAATG...CTTGACTTCTACTCTTGCCTCTCTTTTGCAGTTAGCTGTGTAACTTTGGATAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR CCA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTATCAATGAGAAAGAGCTaGAAGACAGACCTAGCTGTC +
Preference number: 4 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLSMRKS*KTDLAV
Trigger: GACAGCTAGGTCTGTCTTCCAGCTCTTTCTCATTGA...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
3UTR CAA 72 bp AGGAATAGGTCACATGAAGAGGGTATCATGAGCATATaGCCTAGGAAGAAGTGTACCAAGCAATTATTGAGA +
Preference number: 4 (lower is better)
Translates to: RNRSHEEGIMSI*PRKKCTKQLLR
Trigger: TCTCAATAATTGCTTGGTACACTTCTTCCTAGGCAATATGCTCATGATACCCTCTTCATGTGACCTATTCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR TCA 90 bp CTTATCCAAAGTTACACAGCTAACTGCAAAAGAGAGGCAAGAGTAGAAGTCAAGACAGTTCTTCTCTTCTaGAGTACATATTTGGACAAG +
Preference number: 4 (lower is better)
Translates to: LIQSYTANCKREARVEVKTVLLF*STYLDK
Trigger: CTTGTCCAAATATGTACTTCAGAAGAGAAGAACTGT...CTTGACTTCTACTCTTGCCTCTCTTTTGCAGTTAGCTGTGTAACTTTGGATAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR TCA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTAGTACAGGCTTTATTATaGGATCCTTGTGTCACTGTG +
Preference number: 4 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLVQALL*DPCVTV
Trigger: CACAGTGACACAAGGATCTCATAATAAAGCCTGTAC...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR TCA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTATATGGACATGGAATGTaGTATTCTCTGCAGCGTTCT +
Preference number: 4 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLYGHGM*YSLQRS
Trigger: AGAACGCTGCAGAGAATATCACATTCCATGTCCATA...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR TCA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTAGCCCAGTTGACATCATaGGTCTTAAAATTCCAATCC +
Preference number: 4 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLAQLTS*VLKFQS
Trigger: GGATTGGAATTTTAAGACTCATGATGTCAACTGGGC...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR TCA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTACCTTACAATATCCAGTaGGGGAGGCTAAAACCAAAA +
Preference number: 4 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLPYNIQ*GRLKPK
Trigger: TTTTGGTTTTAGCCTCCCTCACTGGATATTGTAAGG...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR TCA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTACAGGGAAAAATTATCTaGGGCAGGGATAAAGGAAGA +
Preference number: 4 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLQGKII*GRDKGR
Trigger: TCTTCCTTTATCCCTGCCTCAGATAATTTTTCCCTG...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR TCA 90 bp CTTATCCAAAGTTACACAGCTAACTGCAAAAGAGAGGCAAGAGTAGAAGTCAAGTTTCTGCTGACAAGATaGGTTCAGGGAAAAATTATC +
Preference number: 4 (lower is better)
Translates to: LIQSYTANCKREARVEVKFLLTR*VQGKII
Trigger: GATAATTTTTCCCTGAACTCATCTTGTCAGCAGAAA...CTTGACTTCTACTCTTGCCTCTCTTTTGCAGTTAGCTGTGTAACTTTGGATAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR TCA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTACCAGTTGCCAAAATTTaGGTCCACATTAGATGTGAG +
Preference number: 4 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLPVAKI*VHIRCE
Trigger: CTCACATCTAATGTGGACTCAAATTTTGGCAACTGG...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR TCA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTAATGAAGAGGGTATCATaGGCATATTGCCTAGGAAGA +
Preference number: 4 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLMKRVS*AYCLGR
Trigger: TCTTCCTAGGCAATATGCTCATGATACCCTCTTCAT...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR TCA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTAGCCCATAAATACAAATaGCTAGCTCCCTTTCTCAAG +
Preference number: 4 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLAHKYK*LAPFLK
Trigger: CTTGAGAAAGGGAGCTAGTCATTTGTATTTATGGGC...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR GCA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTAATCTCAGGTTACAAGTaGTCCATAAGTCAGGTCTTG +
Preference number: 4 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLISGYK*SISQVL
Trigger: CAAGACCTGACTTATGGAGCACTTGTAACCTGAGAT...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240093.8
CDS-3UTR GCA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTAGGCGTGAAACAGCAATaGTTTCTTCTCAATAGCTTC +
Preference number: 4 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLGVKQQ*FLLNSF
Trigger: GAAGCTATTGAGAAGAAAGCATTGCTGTTTCACGCC...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR GCA 90 bp CTTATCCAAAGTTACACAGCTAACTGCAAAAGAGAGGCAAGAGTAGAAGTCAAGAACAAAATATCTCAATaGATCAACATCGTAGAGGCC +
Preference number: 4 (lower is better)
Translates to: LIQSYTANCKREARVEVKNKISQ*INIVEA
Trigger: GGCCTCTACGATGTTGATGCATTGAGATATTTTGTT...CTTGACTTCTACTCTTGCCTCTCTTTTGCAGTTAGCTGTGTAACTTTGGATAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR GCA 90 bp CTTATCCAAAGTTACACAGCTAACTGCAAAAGAGAGGCAAGAGTAGAAGTCAAGCACCACGAGATAAAATaGCTTATCCAAAGTTACACA +
Preference number: 4 (lower is better)
Translates to: LIQSYTANCKREARVEVKHHEIK*LIQSYT
Trigger: TGTGTAACTTTGGATAAGGCATTTTATCTCGTGGTG...CTTGACTTCTACTCTTGCCTCTCTTTTGCAGTTAGCTGTGTAACTTTGGATAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR GCA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTATCTACCAGAGAACTCTaGGGAGATATGGAACTAATG +
Preference number: 4 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLSTREL*GDMELM
Trigger: CATTAGTTCCATATCTCCGCAGAGTTCTCTGGTAGA...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR GCA 90 bp CTTATCCAAAGTTACACAGCTAACTGCAAAAGAGAGGCAAGAGTAGAAGTCAAGCTTAATGGTATCTCTTaGCTCAAAATAGTCCCATCA +
Preference number: 4 (lower is better)
Translates to: LIQSYTANCKREARVEVKLNGIS*LKIVPS
Trigger: TGATGGGACTATTTTGAGGCAAGAGATACCATTAAG...CTTGACTTCTACTCTTGCCTCTCTTTTGCAGTTAGCTGTGTAACTTTGGATAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR CCA 90 bp CTTATCCAAAGTTACACAGCTAACTGCAAAAGAGAGGCAAGAGTAGAAGTCAAGAAAGAGAATCAAGTCTaGACGACTCATTTGAGTAAC +
Preference number: 4 (lower is better)
Translates to: LIQSYTANCKREARVEVKKENQV*TTHLSN
Trigger: GTTACTCAAATGAGTCGTCCAGACTTGATTCTCTTT...CTTGACTTCTACTCTTGCCTCTCTTTTGCAGTTAGCTGTGTAACTTTGGATAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR CCA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTATATGATAGGAGTATTTaGATCCCTCAGGAGAGACTG +
Preference number: 4 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLYDRSI*IPQERL
Trigger: CAGTCTCTCCTGAGGGATCCAAATACTCCTATCATA...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR CCA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTAAAGGATGGCTGGTTCTaGGTAGACTTCAACATTTTC +
Preference number: 4 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLKDGWF*VDFNIF
Trigger: GAAAATGTTGAAGTCTACCCAGAACCAGCCATCCTT...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR CCA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTAAAATGTCTACAAGGATaGCTGGTTCTGGGTAGACTT +
Preference number: 4 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLKCLQG*LVLGRL
Trigger: AAGTCTACCCAGAACCAGCCATCCTTGTAGACATTT...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR CCA 90 bp CTTATCCAAAGTTACACAGCTAACTGCAAAAGAGAGGCAAGAGTAGAAGTCAAGGGAAAGGATGGTGGGTaGTATCAATATCAATCTTTA +
Preference number: 4 (lower is better)
Translates to: LIQSYTANCKREARVEVKGKDGG*YQYQSL
Trigger: TAAAGATTGATATTGATACCACCCACCATCCTTTCC...CTTGACTTCTACTCTTGCCTCTCTTTTGCAGTTAGCTGTGTAACTTTGGATAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
3UTR CAA 72 bp GCAATCATTTACCTTTCCAGTGGACACAATCTGTACTaGACTGAAAGCATGTTAACTGTGAGTTACAGCTAT +
Preference number: 4 (lower is better)
Translates to: AIIYLSSGHNLY*TESMLTVSYSY
Trigger: ATAGCTGTAACTCACAGTTAACATGCTTTCAGTCAAGTACAGATTGTGTCCACTGGAAAGGTAAATGATTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR TCA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTAGAAATAGCGAGCAAATaGCAGTTCTTCTCTTCTGAA +
Preference number: 4 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLEIASK*QFFSSE
Trigger: TTCAGAAGAGAAGAACTGTCATTTGCTCGCTATTTC...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR TCA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTAAACTGCTGCCCAAACTaGATACTGTTGTTTAAAACC +
Preference number: 4 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLNCCPN*ILLFKT
Trigger: GGTTTTAAACAACAGTATTCAGTTTGGGCAGCAGTT...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR TCA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTATGCCTTTCAACAGATTaGACTACTGTGTCTTATAGG +
Preference number: 4 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLCLSTD*TTVSYR
Trigger: CCTATAAGACACAGTAGTTCAATCTGTTGAAAGGCA...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR GCA 90 bp CTTATCCAAAGTTACACAGCTAACTGCAAAAGAGAGGCAAGAGTAGAAGTCAAGTCCGTAAGAATCACCTaGGGTATTTTTATAACTACA +
Preference number: 4 (lower is better)
Translates to: LIQSYTANCKREARVEVKSVRIT*GIFITT
Trigger: TGTAGTTATAAAAATACCGCAGGTGATTCTTACGGA...CTTGACTTCTACTCTTGCCTCTCTTTTGCAGTTAGCTGTGTAACTTTGGATAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR GCA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTAAGTTACACAGCTAACTaGAAAAGAGAGGCAAGAGTA +
Preference number: 4 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLSYTAN*KREARV
Trigger: TACTCTTGCCTCTCTTTTGCAGTTAGCTGTGTAACT...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR CCA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTAACATTCACTTGCCCATaGCAATCTGGCAACTATATT +
Preference number: 4 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLTFTCP*QSGNYI
Trigger: AATATAGTTGCCAGATTGCCATGGGCAAGTGAATGT...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR TCA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTAACAGTTCTTCTCTTCTaGAGTACATATTTGGACAAG +
Preference number: 4 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLTVLLF*STYLDK
Trigger: CTTGTCCAAATATGTACTTCAGAAGAGAAGAACTGT...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR TCA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTAACGACACAAAAGCATTaGAAAGAATCACAAGTTCCT +
Preference number: 4 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLTTQKH*KESQVP
Trigger: AGGAACTTGTGATTCTTTTCAATGCTTTTGTGTCGT...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR TCA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTAAGAAGACTTGGATCCTaGGAGAAAATTGTAATCCTA +
Preference number: 4 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLRRLGS*EKIVIL
Trigger: TAGGATTACAATTTTCTCTCAGGATCCAAGTCTTCT...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR TCA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTATATAAAATGGTCAAATaGGAACCAAATGAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLYKMVK*EPNESW
Trigger: CCAGCTCTCATTTGGTTCTCATTTGACCATTTTATA...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR TCA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTATTTCTGCTGACAAGATaGGTTCAGGGAAAAATTATC +
Preference number: 4 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLFLLTR*VQGKII
Trigger: GATAATTTTTCCCTGAACTCATCTTGTCAGCAGAAA...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR GCA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTAAACAAAATATCTCAATaGATCAACATCGTAGAGGCC +
Preference number: 4 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLNKISQ*INIVEA
Trigger: GGCCTCTACGATGTTGATGCATTGAGATATTTTGTT...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR GCA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTACACCACGAGATAAAATaGCTTATCCAAAGTTACACA +
Preference number: 4 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLHHEIK*LIQSYT
Trigger: TGTGTAACTTTGGATAAGGCATTTTATCTCGTGGTG...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR CCA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTAAACCTGATATGGACATaGAATGTGATATTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLNLIWT*NVIFSA
Trigger: TGCAGAGAATATCACATTCCATGTCCATATCAGGTT...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR GCA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTACATCATGTAGCAGACTaGATAAAATATAATAGGCCT +
Preference number: 4 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLHHVAD*IKYNRP
Trigger: AGGCCTATTATATTTTATGCAGTCTGCTACATGATG...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR CCA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTAAATTACAACCAAGAGTaGTACGAGATAAAGAATGCT +
Preference number: 4 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLNYNQE*YEIKNA
Trigger: AGCATTCTTTATCTCGTACCACTCTTGGTTGTAATT...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR CCA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTATCAAAGTATGATTCTTaGATTACCTCCGTAAGAATC +
Preference number: 4 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLSKYDS*ITSVRI
Trigger: GATTCTTACGGAGGTAATCCAAGAATCATACTTTGA...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR CCA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTAGTACCAAATGAACACTaGTCTAATTGCCTATTTTGT +
Preference number: 4 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLVPNEH*SNCLFC
Trigger: ACAAAATAGGCAATTAGACCAGTGTTCATTTGGTAC...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS GCA 90 bp GCGTGTACCTGCCATCACGTGATCTGTGGAGGCTGCCGTGGTAGCTaGTCACTTTGCTGTGGATGCTTCCTGCTTTGCTTCTTTGATCAT +
Preference number: 5 (lower is better)
Translates to: ACTCHHVICGGCRGS*SLCCGCFLLCFFDH
Trigger: ATGATCAAAGAAGCAAAGCAGGAAGCATCCACAGCAAAGTGAGCAGCTACCACGGCAGCCTCCACAGATCACGTGATGGCAGGTACACGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS GCA 90 bp GATGAGAACTACTATGCCTGGAGTGATCTGTTAGTCGTGACATGCTaGCATGAGGTAGTCTCTCCTCCATTCCTCTGTAACTGCAGGGCG +
Preference number: 5 (lower is better)
Translates to: DENYYAWSDLLVVTC*HEVVSPPFLCNCRA
Trigger: CGCCCTGCAGTTACAGAGGAATGGAGGAGAGACTACCTCATGGCAGCATGTCACGACTAACAGATCACTCCAGGCATAGTAGTTCTCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS GCA 90 bp GCCGATGAGAACTACTATGCCTGGAGTGATCTGTTAGTCGTGACATaGTGCCATGAGGTAGTCTCTCCTCCATTCCTCTGTAACTGCAGG +
Preference number: 5 (lower is better)
Translates to: ADENYYAWSDLLVVT*CHEVVSPPFLCNCR
Trigger: CCTGCAGTTACAGAGGAATGGAGGAGAGACTACCTCATGGCAGCATGTCACGACTAACAGATCACTCCAGGCATAGTAGTTCTCATCGGC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR CAA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCGTTCTTGTATCCACGTaGTTTCCCAGATGCCCCGGT +
Preference number: 5 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFVLVST*FPRCPG
Trigger: ACCGGGGCATCTGGGAAACAACGTGGATACAAGAAC...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR CAA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCCGCACCGTCAGAGGTTaGTTAGCTTGGTCTCACAAA +
Preference number: 5 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFRTVRG*LAWSHK
Trigger: TTTGTGAGACCAAGCTAACAAACCTCTGACGGTGCG...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR CAA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCCTTCACTACCCCACTTaGGCACAGCTGCTAAAAACC +
Preference number: 5 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFLHYPT*AQLLKT
Trigger: GGTTTTTAGCAGCTGTGCCAAAGTGGGGTAGTGAAG...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR CAA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCGATGCCCCGGTAAGCTaGCTCATAAAAGTAGCATCC +
Preference number: 5 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFDAPVS*LIKVAS
Trigger: GGATGCTACTTTTATGAGCAAGCTTACCGGGGCATC...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR CAA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCAGTACAGAAGGGGATTaGCCATGTTCATCAGGCTGG +
Preference number: 5 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFSTEGD*PCSSGW
Trigger: CCAGCCTGATGAACATGGCAAATCCCCTTCTGTACT...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR CAA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCAGACATCACATGGGTTaGGGCAAAGGGGGCAGATTT +
Preference number: 5 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFRHHMG*GKGGRF
Trigger: AAATCTGCCCCCTTTGCCCAAACCCATGTGATGTCT...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS GCA 90 bp TCTTGGCACATCCTCAAGGTAATAGGTTCACAAGAAAACAAACTGTaGCCACCTATATGCCCCATGAACACAGTCAAGGGCCAAAGAGAG +
Preference number: 5 (lower is better)
Translates to: SWHILKVIGSQENKL*PPICPMNTVKGQRE
Trigger: CTCTCTTTGGCCCTTGACTGTGTTCATGGGGCATATAGGTGGGCACAGTTTGTTTTCTTGTGAACCTATTACCTTGAGGATGTGCCAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR CAA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCTTCTCTGCAGCGTTCTaGTATCCACGTTGTTTCCCA +
Preference number: 5 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFFSAAF*YPRCFP
Trigger: TGGGAAACAACGTGGATACAAGAACGCTGCAGAGAA...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR CAA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCTCCTGCTTTGCTTCTTaGATCATCCACCATAGCCAG +
Preference number: 5 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFSCFAS*IIHHSQ
Trigger: CTGGCTATGGTGGATGATCAAAGAAGCAAAGCAGGA...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR CAA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCAGTACAGCCCAGAATTaGGCATCAGGTGCAGAACAA +
Preference number: 5 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFSTAQN*ASGAEQ
Trigger: TTGTTCTGCACCTGATGCCAAATTCTGGGCTGTACT...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR CAA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCGTTCTCTCATGCTGTTaGCAGGAGAGATTCTCAGAC +
Preference number: 5 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFVLSCC*QERFSD
Trigger: GTCTGAGAATCTCTCCTGCAAACAGCATGAGAGAAC...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS TCA 90 bp CTTGACTTTCTTATGATAGGAGTATTTGGATCCCTCAGGAGAGACTaGGCAAAATCAGGTTCCTGGAGTACCTGTCGGCTCTCATTCACT +
Preference number: 5 (lower is better)
Translates to: LDFLMIGVFGSLRRD*AKSGSWSTCRLSFT
Trigger: AGTGAATGAGAGCCGACAGGTACTCCAGGAACCTGATTTTGCTCAGTCTCTCCTGAGGGATCCAAATACTCCTATCATAAGAAAGTCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR CAA 90 bp CTTATCCAAAGTTACACAGCTAACTGCAAAAGAGAGGCAAGAGTAGAAGTCAAGGCAGGGATGGATGCATaGCAGGCTACTCGATCTTCA +
Preference number: 5 (lower is better)
Translates to: LIQSYTANCKREARVEVKAGMDA*QATRSS
Trigger: TGAAGATCGAGTAGCCTGCAATGCATCCATCCCTGC...CTTGACTTCTACTCTTGCCTCTCTTTTGCAGTTAGCTGTGTAACTTTGGATAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR CAA 90 bp CTTATCCAAAGTTACACAGCTAACTGCAAAAGAGAGGCAAGAGTAGAAGTCAAGGTTCTTGTATCCACGTaGTTTCCCAGATGCCCCGGT +
Preference number: 5 (lower is better)
Translates to: LIQSYTANCKREARVEVKVLVST*FPRCPG
Trigger: ACCGGGGCATCTGGGAAACAACGTGGATACAAGAAC...CTTGACTTCTACTCTTGCCTCTCTTTTGCAGTTAGCTGTGTAACTTTGGATAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR CAA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCGTCTGGACGACTCATTaGAGTAACCTGATATGGACA +
Preference number: 5 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFVWTTH*SNLIWT
Trigger: TGTCCATATCAGGTTACTCAAATGAGTCGTCCAGAC...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR CAA 90 bp CTTATCCAAAGTTACACAGCTAACTGCAAAAGAGAGGCAAGAGTAGAAGTCAAGTCAGACCTGCCTGCTTaGAGCATTAACTCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: LIQSYTANCKREARVEVKSDLPA*SINSSS
Trigger: GGAGCTGGAGTTAATGCTCAAAGCAGGCAGGTCTGA...CTTGACTTCTACTCTTGCCTCTCTTTTGCAGTTAGCTGTGTAACTTTGGATAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR CAA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCGGTATCATGAGCATATaGCCTAGGAAGAAGTGTACC +
Preference number: 5 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFGIMSI*PRKKCT
Trigger: GGTACACTTCTTCCTAGGCAATATGCTCATGATACC...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS TCA 90 bp ATGAGTCATGGGATTATTACTGAGATCTCTGATGCTGCTATGTCGTaGCTGTTCATTGAGCCGATGAGAACTACTATGCCTGGAGTGATC +
Preference number: 5 (lower is better)
Translates to: MSHGIITEISDAAMS*LFIEPMRTTMPGVI
Trigger: GATCACTCCAGGCATAGTAGTTCTCATCGGCTCAATGAACAGTCACGACATAGCAGCATCAGAGATCTCAGTAATAATCCCATGACTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS GCA 90 bp TGTGATATTCTCTGCAGCGTTCTTGTATCCACGTTGTTTCCCAGATaGCCCGGTAAGCTTGCTCATAAAAGTAGCATCCAATTACAACCA +
Preference number: 5 (lower is better)
Translates to: CDILCSVLVSTLFPR*PGKLAHKSSIQLQP
Trigger: TGGTTGTAATTGGATGCTACTTTTATGAGCAAGCTTACCGGGGCATCTGGGAAACAACGTGGATACAAGAACGCTGCAGAGAATATCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR CAA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCTCCATAAGTCAGGTCTaGAGAAATGCTATCCTCAGA +
Preference number: 5 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFSISQV*RNAILR
Trigger: TCTGAGGATAGCATTTCTCAAGACCTGACTTATGGA...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240093.8
CDS-3UTR CAA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCGGCCAACATATCAAGTaGATCAACCACATTCCCAAA +
Preference number: 5 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFGQHIK*INHIPK
Trigger: TTTGGGAATGTGGTTGATCAACTTGATATGTTGGCC...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR CAA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCCAAAGCTGCTGTCTGTaGGTCATAATGATTCAGAAG +
Preference number: 5 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFQSCCL*VIMIQK
Trigger: CTTCTGAATCATTATGACCAACAGACAGCAGCTTTG...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR CAA 90 bp CTTATCCAAAGTTACACAGCTAACTGCAAAAGAGAGGCAAGAGTAGAAGTCAAGCTGGGGCTCCTTCAGTaGGTTCTCCAGCTAAATTCA +
Preference number: 5 (lower is better)
Translates to: LIQSYTANCKREARVEVKLGLLQ*VLQLNS
Trigger: TGAATTTAGCTGGAGAACCAACTGAAGGAGCCCCAG...CTTGACTTCTACTCTTGCCTCTCTTTTGCAGTTAGCTGTGTAACTTTGGATAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR CAA 90 bp CTTATCCAAAGTTACACAGCTAACTGCAAAAGAGAGGCAAGAGTAGAAGTCAAGGATGCCCCGGTAAGCTaGCTCATAAAAGTAGCATCC +
Preference number: 5 (lower is better)
Translates to: LIQSYTANCKREARVEVKDAPVS*LIKVAS
Trigger: GGATGCTACTTTTATGAGCAAGCTTACCGGGGCATC...CTTGACTTCTACTCTTGCCTCTCTTTTGCAGTTAGCTGTGTAACTTTGGATAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR CAA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTAGTAGCCTACTGGCTATaGGGCAAGGCAAGTGCAGAC +
Preference number: 5 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLVAYWL*GKASAD
Trigger: GTCTGCACTTGCCTTGCCCAATAGCCAGTAGGCTAC...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR CAA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCTGGAGAATGCAGCATTaGAGGAATAGGTCACATGAA +
Preference number: 5 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFWRMQH*RNRSHE
Trigger: TTCATGTGACCTATTCCTCAAATGCTGCATTCTCCA...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS TCA 90 bp CCATCTTCTTCAATAACCCGATTCATGCTGGTGCCATGTGTGATATaGGTCATGGGATTATTACTGAGATCTCTGATGCTGCTATGTCGT +
Preference number: 5 (lower is better)
Translates to: PSSSITRFMLVPCVI*VMGLLLRSLMLLCR
Trigger: ACGACATAGCAGCATCAGAGATCTCAGTAATAATCCCATGACTCATATCACACATGGCACCAGCATGAATCGGGTTATTGAAGAAGATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS GCA 90 bp GGCTTTATTATGAGATCCTTGTGTCACTGTGGAAGCCTTATATTGTaGAGGGATGGATGCATTGCAGGCTACTCGATCTTCAAGCAAAAA +
Preference number: 5 (lower is better)
Translates to: GFIMRSLCHCGSLIL*RDGCIAGYSIFKQK
Trigger: TTTTTGCTTGAAGATCGAGTAGCCTGCAATGCATCCATCCCTGCACAATATAAGGCTTCCACAGTGACACAAGGATCTCATAATAAAGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR CAA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTAGGTGGAATGGCTCCATaGCCAAAGCTGCTGTCTGTT +
Preference number: 5 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLGGMAP*PKLLSV
Trigger: AACAGACAGCAGCTTTGGCAATGGAGCCATTCCACC...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR CAA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTAGCAGGGATGGATGCATaGCAGGCTACTCGATCTTCA +
Preference number: 5 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLAGMDA*QATRSS
Trigger: TGAAGATCGAGTAGCCTGCAATGCATCCATCCCTGC...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR CAA 90 bp CTTATCCAAAGTTACACAGCTAACTGCAAAAGAGAGGCAAGAGTAGAAGTCAAGTTCTCTGCAGCGTTCTaGTATCCACGTTGTTTCCCA +
Preference number: 5 (lower is better)
Translates to: LIQSYTANCKREARVEVKFSAAF*YPRCFP
Trigger: TGGGAAACAACGTGGATACAAGAACGCTGCAGAGAA...CTTGACTTCTACTCTTGCCTCTCTTTTGCAGTTAGCTGTGTAACTTTGGATAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR CAA 90 bp CTTATCCAAAGTTACACAGCTAACTGCAAAAGAGAGGCAAGAGTAGAAGTCAAGTCCTGCTTTGCTTCTTaGATCATCCACCATAGCCAG +
Preference number: 5 (lower is better)
Translates to: LIQSYTANCKREARVEVKSCFAS*IIHHSQ
Trigger: CTGGCTATGGTGGATGATCAAAGAAGCAAAGCAGGA...CTTGACTTCTACTCTTGCCTCTCTTTTGCAGTTAGCTGTGTAACTTTGGATAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR CAA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTAAAGCTGGAGGACTGCTaGAGCCTAGGAGTTCAAGGT +
Preference number: 5 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLKLEDC*SLGVQG
Trigger: ACCTTGAACTCCTAGGCTCAAGCAGTCCTCCAGCTT...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR CAA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCAAAGCAGAAAAGTTGTaGGAAGTTGGGGTTAAAGAC +
Preference number: 5 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFKAEKL*EVGVKD
Trigger: GTCTTTAACCCCAACTTCCAACAACTTTTCTGCTTT...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR CAA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCATTATAAGGCAAATCTaGGCACATCCTCAAGGTAAT +
Preference number: 5 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFIIRQI*AHPQGN
Trigger: ATTACCTTGAGGATGTGCCAAGATTTGCCTTATAAT...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR CAA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTACTGGGGCTCCTTCAGTaGGTTCTCCAGCTAAATTCA +
Preference number: 5 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLLGLLQ*VLQLNS
Trigger: TGAATTTAGCTGGAGAACCAACTGAAGGAGCCCCAG...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR CAA 90 bp CTTATCCAAAGTTACACAGCTAACTGCAAAAGAGAGGCAAGAGTAGAAGTCAAGAATGAAGACATTCACTaGCCCATGGCAATCTGGCAA +
Preference number: 5 (lower is better)
Translates to: LIQSYTANCKREARVEVKNEDIH*PMAIWQ
Trigger: TTGCCAGATTGCCATGGGCAAGTGAATGTCTTCATT...CTTGACTTCTACTCTTGCCTCTCTTTTGCAGTTAGCTGTGTAACTTTGGATAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR CAA 90 bp CTTATCCAAAGTTACACAGCTAACTGCAAAAGAGAGGCAAGAGTAGAAGTCAAGACCCAACACCCAGATTaGAACCAGTGTTCAAAAGAC +
Preference number: 5 (lower is better)
Translates to: LIQSYTANCKREARVEVKTQHPD*NQCSKD
Trigger: GTCTTTTGAACACTGGTTCAAATCTGGGTGTTGGGT...CTTGACTTCTACTCTTGCCTCTCTTTTGCAGTTAGCTGTGTAACTTTGGATAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR CAA 90 bp AAAACCCAGGAGACTGATTACAATCAGACGGAAGGCATGCGATACCTAGTCTTCGAGGGGGAAATTATTTaGCCTCTAAATGATACTTAC +
Preference number: 5 (lower is better)
Translates to: KTQETDYNQTEGMRYLVFEGEII*PLNDTY
Trigger: GTAAGTATCATTTAGAGGCAAAATAATTTCCCCCTC...GAAGACTAGGTATCGCATGCCTTCCGTCTGATTGTAATCAGTCTCCTGGGTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR CAA 90 bp CTTATCCAAAGTTACACAGCTAACTGCAAAAGAGAGGCAAGAGTAGAAGTCAAGGGTATCATGAGCATATaGCCTAGGAAGAAGTGTACC +
Preference number: 5 (lower is better)
Translates to: LIQSYTANCKREARVEVKGIMSI*PRKKCT
Trigger: GGTACACTTCTTCCTAGGCAATATGCTCATGATACC...CTTGACTTCTACTCTTGCCTCTCTTTTGCAGTTAGCTGTGTAACTTTGGATAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR CAA 90 bp CTTATCCAAAGTTACACAGCTAACTGCAAAAGAGAGGCAAGAGTAGAAGTCAAGGCAGGTAAGGAAGTTTaGGAGAATGCAGCATTTGAG +
Preference number: 5 (lower is better)
Translates to: LIQSYTANCKREARVEVKAGKEV*ENAAFE
Trigger: CTCAAATGCTGCATTCTCCAAAACTTCCTTACCTGC...CTTGACTTCTACTCTTGCCTCTCTTTTGCAGTTAGCTGTGTAACTTTGGATAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR CAA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTAAGACATCACATGGGTTaGGGCAAAGGGGGCAGATTT +
Preference number: 5 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLRHHMG*GKGGRF
Trigger: AAATCTGCCCCCTTTGCCCAAACCCATGTGATGTCT...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS CCA 90 bp CCGGTAAGCTTGCTCATAAAAGTAGCATCCAATTACAACCAAGAGTaGTACGAGATAAAGAATGCTGAAAACACCGATCCGGATCATAAA +
Preference number: 5 (lower is better)
Translates to: PVSLLIKVASNYNQE*YEIKNAENTDPDHK
Trigger: TTTATGATCCGGATCGGTGTTTTCAGCATTCTTTATCTCGTACCACTCTTGGTTGTAATTGGATGCTACTTTTATGAGCAAGCTTACCGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR CAA 90 bp CTTATCCAAAGTTACACAGCTAACTGCAAAAGAGAGGCAAGAGTAGAAGTCAAGGGCCAACATATCAAGTaGATCAACCACATTCCCAAA +
Preference number: 5 (lower is better)
Translates to: LIQSYTANCKREARVEVKGQHIK*INHIPK
Trigger: TTTGGGAATGTGGTTGATCAACTTGATATGTTGGCC...CTTGACTTCTACTCTTGCCTCTCTTTTGCAGTTAGCTGTGTAACTTTGGATAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR CAA 90 bp CTTATCCAAAGTTACACAGCTAACTGCAAAAGAGAGGCAAGAGTAGAAGTCAAGCAAAGCTGCTGTCTGTaGGTCATAATGATTCAGAAG +
Preference number: 5 (lower is better)
Translates to: LIQSYTANCKREARVEVKQSCCL*VIMIQK
Trigger: CTTCTGAATCATTATGACCAACAGACAGCAGCTTTG...CTTGACTTCTACTCTTGCCTCTCTTTTGCAGTTAGCTGTGTAACTTTGGATAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR CAA 90 bp CTTATCCAAAGTTACACAGCTAACTGCAAAAGAGAGGCAAGAGTAGAAGTCAAGTGGAGAATGCAGCATTaGAGGAATAGGTCACATGAA +
Preference number: 5 (lower is better)
Translates to: LIQSYTANCKREARVEVKWRMQH*RNRSHE
Trigger: TTCATGTGACCTATTCCTCAAATGCTGCATTCTCCA...CTTGACTTCTACTCTTGCCTCTCTTTTGCAGTTAGCTGTGTAACTTTGGATAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR CAA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTACAGAGGTTTGTTAGCTaGGTCTCACAAAAGGCGTTT +
Preference number: 5 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLQRFVS*VSQKAF
Trigger: AAACGCCTTTTGTGAGACCAAGCTAACAAACCTCTG...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR CAA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTATGTGGAAGCCTTATATaGTGCAGGGATGGATGCATT +
Preference number: 5 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLCGSLI*CRDGCI
Trigger: AATGCATCCATCCCTGCACAATATAAGGCTTCCACA...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR CAA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTAAATGAAGACATTCACTaGCCCATGGCAATCTGGCAA +
Preference number: 5 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLNEDIH*PMAIWQ
Trigger: TTGCCAGATTGCCATGGGCAAGTGAATGTCTTCATT...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR CAA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTAACCCAACACCCAGATTaGAACCAGTGTTCAAAAGAC +
Preference number: 5 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLTQHPD*NQCSKD
Trigger: GTCTTTTGAACACTGGTTCAAATCTGGGTGTTGGGT...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR CAA 90 bp CTTATCCAAAGTTACACAGCTAACTGCAAAAGAGAGGCAAGAGTAGAAGTCAAGAAAGCAGAAAAGTTGTaGGAAGTTGGGGTTAAAGAC +
Preference number: 5 (lower is better)
Translates to: LIQSYTANCKREARVEVKKAEKL*EVGVKD
Trigger: GTCTTTAACCCCAACTTCCAACAACTTTTCTGCTTT...CTTGACTTCTACTCTTGCCTCTCTTTTGCAGTTAGCTGTGTAACTTTGGATAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR CAA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTAGCAGGTAAGGAAGTTTaGGAGAATGCAGCATTTGAG +
Preference number: 5 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLAGKEV*ENAAFE
Trigger: CTCAAATGCTGCATTCTCCAAAACTTCCTTACCTGC...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS CCA 90 bp TTCAAACAGTTAAATACTCTTCGCACCGTCAGAGGTTTGTTAGCTTaGTCTCACAAAAGGCGTTTGTTTTTGGTTTCACAATATGGGAAA +
Preference number: 5 (lower is better)
Translates to: FKQLNTLRTVRGLLA*SHKRRLFLVSQYGK
Trigger: TTTCCCATATTGTGAAACCAAAAACAAACGCCTTTTGTGAGACCAAGCTAACAAACCTCTGACGGTGCGAAGAGTATTTAACTGTTTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000240093.8
ENST00000523546.1
ENST00000537916.2
CDS-3UTR CAA 90 bp CTTATCCAAAGTTACACAGCTAACTGCAAAAGAGAGGCAAGAGTAGAAGTCAAGCACACGCCACTAATATaGTCACCTTCAATTTTATTC +
Preference number: 5 (lower is better)
Translates to: LIQSYTANCKREARVEVKHTPLI*SPSILF
Trigger: GAATAAAATTGAAGGTGACAATATTAGTGGCGTGTG...CTTGACTTCTACTCTTGCCTCTCTTTTGCAGTTAGCTGTGTAACTTTGGATAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR CAA 90 bp CTTATCCAAAGTTACACAGCTAACTGCAAAAGAGAGGCAAGAGTAGAAGTCAAGATCAGAAAACTGACTTaGCTGCCTGATGAGAATATT +
Preference number: 5 (lower is better)
Translates to: LIQSYTANCKREARVEVKIRKLT*LPDENI
Trigger: AATATTCTCATCAGGCAGCAAAGTCAGTTTTCTGAT...CTTGACTTCTACTCTTGCCTCTCTTTTGCAGTTAGCTGTGTAACTTTGGATAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR CAA 90 bp CTTATCCAAAGTTACACAGCTAACTGCAAAAGAGAGGCAAGAGTAGAAGTCAAGTCATTCTTAGAAGACTaGGATCCTGAGAGAAAATTG +
Preference number: 5 (lower is better)
Translates to: LIQSYTANCKREARVEVKSFLED*DPERKL
Trigger: CAATTTTCTCTCAGGATCCAAGTCTTCTAAGAATGA...CTTGACTTCTACTCTTGCCTCTCTTTTGCAGTTAGCTGTGTAACTTTGGATAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR CAA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTACACACGCCACTAATATaGTCACCTTCAATTTTATTC +
Preference number: 5 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLHTPLI*SPSILF
Trigger: GAATAAAATTGAAGGTGACAATATTAGTGGCGTGTG...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS-3UTR CAA 90 bp AATTGGATGACCGATTTAAAGACTGTACCAAATGAACACTGGTCTAATTGCCTATCATTCTTAGAAGACTaGGATCCTGAGAGAAAATTG +
Preference number: 5 (lower is better)
Translates to: NWMTDLKTVPNEHWSNCLSFLED*DPERKL
Trigger: CAATTTTCTCTCAGGATCCAAGTCTTCTAAGAATGA...TAGGCAATTAGACCAGTGTTCATTTGGTACAGTCTTTAAATCGGTCATCCAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS GCA 72 bp AGGGCGTGTACCTGCCATCACGTGATCTGTGGAGGCTaGCGTGGTAGCTGCTCACTTTGCTGTGGATGCTTC +
Preference number: 6 (lower is better)
Translates to: RACTCHHVICGG*RGSCSLCCGCF
Trigger: GAAGCATCCACAGCAAAGTGAGCAGCTACCACGGCAGCCTCCACAGATCACGTGATGGCAGGTACACGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS GCA 72 bp TGCCATCACGTGATCTGTGGAGGCTGCCGTGGTAGCTaGTCACTTTGCTGTGGATGCTTCCTGCTTTGCTTC +
Preference number: 6 (lower is better)
Translates to: CHHVICGGCRGS*SLCCGCFLLCF
Trigger: GAAGCAAAGCAGGAAGCATCCACAGCAAAGTGAGCAGCTACCACGGCAGCCTCCACAGATCACGTGATGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS CAA 72 bp CATAGTCTCTCTGCACTGCCACTGGGGCTCCTTCAGTaGGTTCTCCAGCTAAATTCAGATCCACAAGTCGAG +
Preference number: 6 (lower is better)
Translates to: HSLSALPLGLLQ*VLQLNSDPQVE
Trigger: CTCGACTTGTGGATCTGAATTTAGCTGGAGAACCAACTGAAGGAGCCCCAGTGGCAGTGCAGAGAGACTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS CAA 90 bp ACCAAAAACCATAGTCTCTCTGCACTGCCACTGGGGCTCCTTCAGTaGGTTCTCCAGCTAAATTCAGATCCACAAGTCGAGGATATGGCT +
Preference number: 6 (lower is better)
Translates to: TKNHSLSALPLGLLQ*VLQLNSDPQVEDMA
Trigger: AGCCATATCCTCGACTTGTGGATCTGAATTTAGCTGGAGAACCAACTGAAGGAGCCCCAGTGGCAGTGCAGAGAGACTATGGTTTTTGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS TCA 72 bp ATGGTTAGAGTTCCGGGGATGCCCCATGCACTGGCGTaGAACAGCAATGCTTTCTTCTCAATAGCTTCACTA +
Preference number: 6 (lower is better)
Translates to: MVRVPGMPHALA*NSNAFFSIASL
Trigger: TAGTGAAGCTATTGAGAAGAAAGCATTGCTGTTTCACGCCAGTGCATGGGGCATCCCCGGAACTCTAACCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS TCA 72 bp CTTATGATAGGAGTATTTGGATCCCTCAGGAGAGACTaGGCAAAATCAGGTTCCTGGAGTACCTGTCGGCTC +
Preference number: 6 (lower is better)
Translates to: LMIGVFGSLRRD*AKSGSWSTCRL
Trigger: GAGCCGACAGGTACTCCAGGAACCTGATTTTGCTCAGTCTCTCCTGAGGGATCCAAATACTCCTATCATAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS GCA 72 bp CTCTGCAGCGTTCTTGTATCCACGTTGTTTCCCAGATaGCCCGGTAAGCTTGCTCATAAAAGTAGCATCCAA +
Preference number: 6 (lower is better)
Translates to: LCSVLVSTLFPR*PGKLAHKSSIQ
Trigger: TTGGATGCTACTTTTATGAGCAAGCTTACCGGGGCATCTGGGAAACAACGTGGATACAAGAACGCTGCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS GCA 72 bp AACTACTATGCCTGGAGTGATCTGTTAGTCGTGACATaGTGCCATGAGGTAGTCTCTCCTCCATTCCTCTGT +
Preference number: 6 (lower is better)
Translates to: NYYAWSDLLVVT*CHEVVSPPFLC
Trigger: ACAGAGGAATGGAGGAGAGACTACCTCATGGCAGCATGTCACGACTAACAGATCACTCCAGGCATAGTAGTT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS CAA 90 bp GCAGCGTTCTTGTATCCACGTTGTTTCCCAGATGCCCCGGTAAGCTaGCTCATAAAAGTAGCATCCAATTACAACCAAGAGTGGTACGAG +
Preference number: 6 (lower is better)
Translates to: AAFLYPRCFPDAPVS*LIKVASNYNQEWYE
Trigger: CTCGTACCACTCTTGGTTGTAATTGGATGCTACTTTTATGAGCAAGCTTACCGGGGCATCTGGGAAACAACGTGGATACAAGAACGCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS GCA 72 bp ATGAGATCCTTGTGTCACTGTGGAAGCCTTATATTGTaGAGGGATGGATGCATTGCAGGCTACTCGATCTTC +
Preference number: 6 (lower is better)
Translates to: MRSLCHCGSLIL*RDGCIAGYSIF
Trigger: GAAGATCGAGTAGCCTGCAATGCATCCATCCCTGCACAATATAAGGCTTCCACAGTGACACAAGGATCTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS CAA 72 bp ATATGGACATGGAATGTGATATTCTCTGCAGCGTTCTaGTATCCACGTTGTTTCCCAGATGCCCCGGTAAGC +
Preference number: 6 (lower is better)
Translates to: IWTWNVIFSAAF*YPRCFPDAPVS
Trigger: GCTTACCGGGGCATCTGGGAAACAACGTGGATACAAGAACGCTGCAGAGAATATCACATTCCATGTCCATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS CAA 90 bp ATGGACATGGAATGTGATATTCTCTGCAGCGTTCTTGTATCCACGTaGTTTCCCAGATGCCCCGGTAAGCTTGCTCATAAAAGTAGCATC +
Preference number: 6 (lower is better)
Translates to: MDMECDILCSVLVST*FPRCPGKLAHKSSI
Trigger: GATGCTACTTTTATGAGCAAGCTTACCGGGGCATCTGGGAAACAACGTGGATACAAGAACGCTGCAGAGAATATCACATTCCATGTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS CAA 90 bp AGTAACCTGATATGGACATGGAATGTGATATTCTCTGCAGCGTTCTaGTATCCACGTTGTTTCCCAGATGCCCCGGTAAGCTTGCTCATA +
Preference number: 6 (lower is better)
Translates to: SNLIWTWNVIFSAAF*YPRCFPDAPVSLLI
Trigger: TATGAGCAAGCTTACCGGGGCATCTGGGAAACAACGTGGATACAAGAACGCTGCAGAGAATATCACATTCCATGTCCATATCAGGTTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS GCA 72 bp GACACGTCCATATTCCATACAAATAGGAGCGTAGAGTaGACAAAGAAAAGGCCGGAAATCCCGAGAACAATC +
Preference number: 6 (lower is better)
Translates to: DTSIFHTNRSVE*TKKRPEIPRTI
Trigger: GATTGTTCTCGGGATTTCCGGCCTTTTCTTTGTGCACTCTACGCTCCTATTTGTATGGAATATGGACGTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS GCA 72 bp TGTCACTGTGGAAGCCTTATATTGTGCAGGGATGGATaGATTGCAGGCTACTCGATCTTCAAGCAAAAATCC +
Preference number: 6 (lower is better)
Translates to: CHCGSLILCRDG*IAGYSIFKQKS
Trigger: GGATTTTTGCTTGAAGATCGAGTAGCCTGCAATGCATCCATCCCTGCACAATATAAGGCTTCCACAGTGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS CCA 72 bp CTTGTGTCACTGTGGAAGCCTTATATTGTGCAGGGATaGATGCATTGCAGGCTACTCGATCTTCAAGCAAAA +
Preference number: 6 (lower is better)
Translates to: LVSLWKPYIVQG*MHCRLLDLQAK
Trigger: TTTTGCTTGAAGATCGAGTAGCCTGCAATGCATCCATCCCTGCACAATATAAGGCTTCCACAGTGACACAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS CAA 72 bp AGGGTGGAATGGCTCCATTGCCAAAGCTGCTGTCTGTaGGTCATAATGATTCAGAAGATTAGGCATGAAGGT +
Preference number: 6 (lower is better)
Translates to: RVEWLHCQSCCL*VIMIQKIRHEG
Trigger: ACCTTCATGCCTAATCTTCTGAATCATTATGACCAACAGACAGCAGCTTTGGCAATGGAGCCATTCCACCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS CAA 72 bp ATTATGAGATCCTTGTGTCACTGTGGAAGCCTTATATaGTGCAGGGATGGATGCATTGCAGGCTACTCGATC +
Preference number: 6 (lower is better)
Translates to: IMRSLCHCGSLI*CRDGCIAGYSI
Trigger: GATCGAGTAGCCTGCAATGCATCCATCCCTGCACAATATAAGGCTTCCACAGTGACACAAGGATCTCATAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS CAA 72 bp GAATGTGATATTCTCTGCAGCGTTCTTGTATCCACGTaGTTTCCCAGATGCCCCGGTAAGCTTGCTCATAAA +
Preference number: 6 (lower is better)
Translates to: ECDILCSVLVST*FPRCPGKLAHK
Trigger: TTTATGAGCAAGCTTACCGGGGCATCTGGGAAACAACGTGGATACAAGAACGCTGCAGAGAATATCACATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS CAA 90 bp ACAGGCTTTATTATGAGATCCTTGTGTCACTGTGGAAGCCTTATATaGTGCAGGGATGGATGCATTGCAGGCTACTCGATCTTCAAGCAA +
Preference number: 6 (lower is better)
Translates to: TGFIMRSLCHCGSLI*CRDGCIAGYSIFKQ
Trigger: TTGCTTGAAGATCGAGTAGCCTGCAATGCATCCATCCCTGCACAATATAAGGCTTCCACAGTGACACAAGGATCTCATAATAAAGCCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS TCA 72 bp GGGATTATTACTGAGATCTCTGATGCTGCTATGTCGTaGCTGTTCATTGAGCCGATGAGAACTACTATGCCT +
Preference number: 6 (lower is better)
Translates to: GIITEISDAAMS*LFIEPMRTTMP
Trigger: AGGCATAGTAGTTCTCATCGGCTCAATGAACAGTCACGACATAGCAGCATCAGAGATCTCAGTAATAATCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS CCA 72 bp TGGTACAGGCTTTATTATGAGATCCTTGTGTCACTGTaGAAGCCTTATATTGTGCAGGGATGGATGCATTGC +
Preference number: 6 (lower is better)
Translates to: WYRLYYEILVSL*KPYIVQGWMHC
Trigger: GCAATGCATCCATCCCTGCACAATATAAGGCTTCCACAGTGACACAAGGATCTCATAATAAAGCCTGTACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS CAA 72 bp ACTGTGGAAGCCTTATATTGTGCAGGGATGGATGCATaGCAGGCTACTCGATCTTCAAGCAAAAATCCAATG +
Preference number: 6 (lower is better)
Translates to: TVEALYCAGMDA*QATRSSSKNPM
Trigger: CATTGGATTTTTGCTTGAAGATCGAGTAGCCTGCAATGCATCCATCCCTGCACAATATAAGGCTTCCACAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS CAA 72 bp TTGTATCCACGTTGTTTCCCAGATGCCCCGGTAAGCTaGCTCATAAAAGTAGCATCCAATTACAACCAAGAG +
Preference number: 6 (lower is better)
Translates to: LYPRCFPDAPVS*LIKVASNYNQE
Trigger: CTCTTGGTTGTAATTGGATGCTACTTTTATGAGCAAGCTTACCGGGGCATCTGGGAAACAACGTGGATACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS TCA 72 bp TCAATAACCCGATTCATGCTGGTGCCATGTGTGATATaGGTCATGGGATTATTACTGAGATCTCTGATGCTG +
Preference number: 6 (lower is better)
Translates to: SITRFMLVPCVI*VMGLLLRSLML
Trigger: CAGCATCAGAGATCTCAGTAATAATCCCATGACTCATATCACACATGGCACCAGCATGAATCGGGTTATTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS CCA 72 bp AGCCATCAGGTATTTCATCAGAAAGAGAATCAAGTCTaGACGACTCATTTGAGTAACCTGATATGGACATGG +
Preference number: 6 (lower is better)
Translates to: SHQVFHQKENQV*TTHLSNLIWTW
Trigger: CCATGTCCATATCAGGTTACTCAAATGAGTCGTCCAGACTTGATTCTCTTTCTGATGAAATACCTGATGGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS CAA 72 bp GTTAAATACTCTTCGCACCGTCAGAGGTTTGTTAGCTaGGTCTCACAAAAGGCGTTTGTTTTTGGTTTCACA +
Preference number: 6 (lower is better)
Translates to: VKYSSHRQRFVS*VSQKAFVFGFT
Trigger: TGTGAAACCAAAAACAAACGCCTTTTGTGAGACCAAGCTAACAAACCTCTGACGGTGCGAAGAGTATTTAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000240093.8
ENST00000523546.1
ENST00000537916.2
CDS CAA 90 bp ATTCACCATAGGGTGGAATGGCTCCATTGCCAAAGCTGCTGTCTGTaGGTCATAATGATTCAGAAGATTAGGCATGAAGGTAGTATTATA +
Preference number: 6 (lower is better)
Translates to: IHHRVEWLHCQSCCL*VIMIQKIRHEGSII
Trigger: TATAATACTACCTTCATGCCTAATCTTCTGAATCATTATGACCAACAGACAGCAGCTTTGGCAATGGAGCCATTCCACCCTATGGTGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS CAA 90 bp CTTCAAACAGTTAAATACTCTTCGCACCGTCAGAGGTTTGTTAGCTaGGTCTCACAAAAGGCGTTTGTTTTTGGTTTCACAATATGGGAA +
Preference number: 6 (lower is better)
Translates to: LQTVKYSSHRQRFVS*VSQKAFVFGFTIWE
Trigger: TTCCCATATTGTGAAACCAAAAACAAACGCCTTTTGTGAGACCAAGCTAACAAACCTCTGACGGTGCGAAGAGTATTTAACTGTTTGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000240093.8
ENST00000523546.1
ENST00000537916.2
CDS TCA 72 bp TTATTACATGGGGCACATTTGGCCAACATATCAAGTTaGTCAACCACATTCCCAAACCACAGATTCCATCTT +
Preference number: 6 (lower is better)
Translates to: LLHGAHLANISS*STTFPNHRFHL
Trigger: AAGATGGAATCTGTGGTTTGGGAATGTGGTTGATCAACTTGATATGTTGGCCAAATGTGCCCCATGTAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240093.8
ENST00000523546.1
ENST00000537916.2
CDS TCA 72 bp TTCTTCTCTTCTGAAGTACATATTTGGACAAGGAGGTaGACAATCACGCACATGCAGAAAAGAATAACCCAG +
Preference number: 6 (lower is better)
Translates to: FFSSEVHIWTRR*TITHMQKRITQ
Trigger: CTGGGTTATTCTTTTCTGCATGTGCGTGATTGTTCACCTCCTTGTCCAAATATGTACTTCAGAAGAGAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS CCA 72 bp TTAAATACTCTTCGCACCGTCAGAGGTTTGTTAGCTTaGTCTCACAAAAGGCGTTTGTTTTTGGTTTCACAA +
Preference number: 6 (lower is better)
Translates to: LNTLRTVRGLLA*SHKRRLFLVSQ
Trigger: TTGTGAAACCAAAAACAAACGCCTTTTGTGAGACCAAGCTAACAAACCTCTGACGGTGCGAAGAGTATTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000240093.8
ENST00000523546.1
ENST00000537916.2
CDS CCA 72 bp TTGCTCATAAAAGTAGCATCCAATTACAACCAAGAGTaGTACGAGATAAAGAATGCTGAAAACACCGATCCG +
Preference number: 6 (lower is better)
Translates to: LLIKVASNYNQE*YEIKNAENTDP
Trigger: CGGATCGGTGTTTTCAGCATTCTTTATCTCGTACCACTCTTGGTTGTAATTGGATGCTACTTTTATGAGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2
CDS CAA 72 bp TTTATTACATGGGGCACATTTGGCCAACATATCAAGTaGATCAACCACATTCCCAAACCACAGATTCCATCT +
Preference number: 6 (lower is better)
Translates to: FITWGTFGQHIK*INHIPKPQIPS
Trigger: AGATGGAATCTGTGGTTTGGGAATGTGGTTGATCAACTTGATATGTTGGCCAAATGTGCCCCATGTAATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240093.8
ENST00000523546.1
ENST00000537916.2
CDS CAA 72 bp TTCAAACAGTTAAATACTCTTCGCACCGTCAGAGGTTaGTTAGCTTGGTCTCACAAAAGGCGTTTGTTTTTG +
Preference number: 6 (lower is better)
Translates to: FKQLNTLRTVRG*LAWSHKRRLFL
Trigger: CAAAAACAAACGCCTTTTGTGAGACCAAGCTAACAAACCTCTGACGGTGCGAAGAGTATTTAACTGTTTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000240093.8
ENST00000523546.1
ENST00000537916.2
CDS CAA 90 bp GTTAAATTCTTCAAACAGTTAAATACTCTTCGCACCGTCAGAGGTTaGTTAGCTTGGTCTCACAAAAGGCGTTTGTTTTTGGTTTCACAA +
Preference number: 6 (lower is better)
Translates to: VKFFKQLNTLRTVRG*LAWSHKRRLFLVSQ
Trigger: TTGTGAAACCAAAAACAAACGCCTTTTGTGAGACCAAGCTAACAAACCTCTGACGGTGCGAAGAGTATTTAACTGTTTGAAGAATTTAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000240093.8
ENST00000523546.1
ENST00000537916.2
CDS CAA 90 bp ATGATTCAGAAGATTAGGCATGAAGGTAGTATTATAAGGCAAATCTaGGCACATCCTCAAGGTAATAGGTTCACAAGAAAACAAACTGTG +
Preference number: 6 (lower is better)
Translates to: MIQKIRHEGSIIRQI*AHPQGNRFTRKQTV
Trigger: CACAGTTTGTTTTCTTGTGAACCTATTACCTTGAGGATGTGCCAAGATTTGCCTTATAATACTACCTTCATGCCTAATCTTCTGAATCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240093.8
ENST00000537916.2